BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780999|ref|YP_003065412.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62] (562 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780999|ref|YP_003065412.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254040676|gb|ACT57472.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 562 Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust. Identities = 562/562 (100%), Positives = 562/562 (100%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK Sbjct: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY Sbjct: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY Sbjct: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN Sbjct: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS Sbjct: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN Sbjct: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG Sbjct: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ Sbjct: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA Sbjct: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 Query: 541 KSFGRDRLYPISNKFRDHISEE 562 KSFGRDRLYPISNKFRDHISEE Sbjct: 541 KSFGRDRLYPISNKFRDHISEE 562 >gi|315122406|ref|YP_004062895.1| NAD synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495808|gb|ADR52407.1| NAD synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 561 Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/554 (77%), Positives = 492/554 (88%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKIAIAQLNP VGD++GNIAKAR+AREEANRQG DLI+FTELFISGYP EDL+ K+SFIQ Sbjct: 5 LKIAIAQLNPTVGDVSGNIAKARQAREEANRQGADLIIFTELFISGYPAEDLILKESFIQ 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC + TLK DT D GAGI++GFPRQDQEG+ NSV ILDAG I+++RDKI+LPNY+EFH Sbjct: 65 ACYDGMLTLKDDTRDNGAGIIIGFPRQDQEGIFNSVAILDAGKIVSIRDKIHLPNYNEFH 124 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKRTFISG +ND +VFRD +GILICEDIWKNSNIC+HLKKQGA+ L +LNASPY NKL Sbjct: 125 EKRTFISGNTNDIVVFRDNPIGILICEDIWKNSNICRHLKKQGAKILLTLNASPYCRNKL 184 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 K RHEI++ QISHV++PI+YVNQVGGQDELIFDGASFCF+G +QLAFQMKHF EQN +T+ Sbjct: 185 KTRHEIISTQISHVNIPIVYVNQVGGQDELIFDGASFCFNGDRQLAFQMKHFEEQNLITQ 244 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W+YD++ S N +SD S S +YI EEE DYNACV+ LRDYV+KNNFHKVIIGLSGGID Sbjct: 245 WYYDKKSSSLNCISDYSQSKIYIFPTEEETDYNACVVGLRDYVKKNNFHKVIIGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SALCA IAVDALGKENVQTIMLPYKYTS +SLEDAAACAK+L C+YDVLPIHDLV+HFFS Sbjct: 305 SALCATIAVDALGKENVQTIMLPYKYTSNESLEDAAACAKSLDCRYDVLPIHDLVDHFFS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +MSQFLQEEPSGIVAENIQSRIRGNILM LSN S+AMLLTT+NKSEIS+GYGTLYGDMSG Sbjct: 365 IMSQFLQEEPSGIVAENIQSRIRGNILMTLSNKSEAMLLTTNNKSEISIGYGTLYGDMSG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNPLKDLYKT+V++LA WRN+H I GLGP EVIPP ILEK+PSAELRP+Q D++SLP Sbjct: 425 GFNPLKDLYKTKVYKLAYWRNAHCIPCGLGPFKEVIPPRILEKAPSAELRPNQIDEDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 PY ILD+II+ IVEN+ES N ++Y+ ET+RY+E+LLY SEYKRRQ+P GTKIT+KSFG Sbjct: 485 PYAILDNIIEDIVENKESLKNTKKKYSTETIRYIENLLYRSEYKRRQSPPGTKITSKSFG 544 Query: 545 RDRLYPISNKFRDH 558 RDRLYPISNKFRD Sbjct: 545 RDRLYPISNKFRDQ 558 >gi|86357986|ref|YP_469878.1| NAD synthetase [Rhizobium etli CFN 42] gi|86282088|gb|ABC91151.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli CFN 42] Length = 559 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/555 (57%), Positives = 401/555 (72%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLAKAREARADAGREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+V+GFPRQDQ G NSV +LD G ++AVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTADGGPGVVIGFPRQDQTGRYNSVAVLDGGKVVAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F+ G P+ FR +RLGI ICEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFVQGAMPGPVNFRGVRLGIPICEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSQFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + + W+ A IP ++EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGE--AGWHCAEGPMAR---IP-EDEEADYRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+C AIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICTAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSNLFEGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN + LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNENVPPGALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + +D TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|241204941|ref|YP_002976037.1| NAD synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858831|gb|ACS56498.1| NAD+ synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 559 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/555 (56%), Positives = 400/555 (72%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLAKAREARTDAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++ L +DT DGG G+++GFPRQD+ G NSV +LDAG +IAVRDKI+LPNY EF Sbjct: 71 ACWKAVENLAADTADGGPGVIIGFPRQDETGRYNSVAVLDAGKVIAVRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +R+GI ICEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFDQGAMPGPVNFRGVRIGIPICEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSQFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + W+ A +IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGED--GWHCAEGPMA---HIP-ESEEADYRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CA+ALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCARALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALASLFEGTDSGITEENLQSRARGVILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ ++ WRN + LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYAISRWRNENVPPGALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + +D TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|222148504|ref|YP_002549461.1| NAD synthetase [Agrobacterium vitis S4] gi|221735490|gb|ACM36453.1| NAD synthetase [Agrobacterium vitis S4] Length = 559 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/557 (55%), Positives = 403/557 (72%), Gaps = 7/557 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + L+IA+AQ NP VGD+ GN++ AR AR +A G DL+L +ELFISGYPPEDLV K +F Sbjct: 9 ETLRIAVAQFNPTVGDVVGNLSLARTARAKAASLGADLLLLSELFISGYPPEDLVLKPAF 68 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +QAC +A++ L +DT DGG G+++GFPRQ +G NSV I+D G I+ +RDKI+LPNY E Sbjct: 69 LQACKAAVEELAADTADGGPGVIIGFPRQGDKGRHNSVAIIDGGKILGLRDKIDLPNYGE 128 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F+ G P+ FR +RLG+ ICE+IW + +C+ L + GAE L N SPYYH Sbjct: 129 FDEKRVFVEGDMPGPVNFRGVRLGVPICEEIWNDLGVCETLAESGAEILLVPNGSPYYHG 188 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 KL+ R+++V Q+ LP+++ NQVGGQDEL+FDGASFCF+ + LAFQM F E + Sbjct: 189 KLEVRYQVVLRQVIESGLPLVFANQVGGQDELVFDGASFCFNADKTLAFQMPQFEESIVL 248 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 T W ++ W + ++ IP + EEADY AC+L RDYV KN F V++GLSGG Sbjct: 249 TTWT--READGWRCAPGEVSA---IP-EGEEADYRACMLGFRDYVNKNGFKSVVLGLSGG 302 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+CAA+AVDALG E V+TIMLPY+YTS +S +DAA CAKALGC YD++PI + V F Sbjct: 303 IDSAICAAMAVDALGHERVRTIMLPYRYTSEESFKDAADCAKALGCHYDIVPISEPVEGF 362 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM Sbjct: 363 LASLADMFEGTESGITEENLQSRTRGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGDM 422 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGFNP+KDLYK QV+ L++WRN+H LGP EVIP +I+ K+PSAELRP Q DQ+S Sbjct: 423 NGGFNPIKDLYKMQVYALSAWRNAHVPVGALGPAGEVIPANIIAKAPSAELRPDQKDQDS 482 Query: 483 LPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPYP+LDDI++ +VE E S +D TV VEHLLY +EYKRRQ+ G KIT K Sbjct: 483 LPPYPVLDDILECLVEKEMSVDEILGRGHDIATVHRVEHLLYLAEYKRRQSAPGVKITKK 542 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N+FRD Sbjct: 543 NFGRDRRYPITNRFRDR 559 >gi|227822241|ref|YP_002826212.1| NAD synthetase [Sinorhizobium fredii NGR234] gi|227341241|gb|ACP25459.1| glutamine-dependent NAD(+) synthetase [Sinorhizobium fredii NGR234] Length = 560 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/557 (58%), Positives = 407/557 (73%), Gaps = 9/557 (1%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KL+IA+AQLNP VGDIAGN+A+AR AR +A RQG DL+LFTELFISGYPPEDLV K +F+ Sbjct: 10 KLRIAVAQLNPTVGDIAGNMARAREARADAARQGADLVLFTELFISGYPPEDLVLKPAFL 69 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC A++ L ++T DGG G+++GFPRQ NSV +LDAG I+AVRDK++LPNY EF Sbjct: 70 AACLRAVEKLAAETADGGPGVIIGFPRQASLQRHNSVAVLDAGKIVAVRDKVDLPNYGEF 129 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F +G P+ FR IR+GI ICEDIW +C+ LK+ GAE L S N SPYY K Sbjct: 130 DEKRVFDAGEMPGPVNFRGIRIGIPICEDIWGELGVCETLKESGAEILLSPNGSPYYRGK 189 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 + RH+IV Q+ LP+IY NQ+GGQDEL+FDGASF F+ + LAFQM F E ++ Sbjct: 190 VDVRHQIVLKQVIETGLPMIYANQLGGQDELVFDGASFGFNADKSLAFQMSQFEEALSIS 249 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQE-EEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 EW + W S S + L E +EADY AC+L LRDYV KN F V++GLSGG Sbjct: 250 EWARAED--GWV-----STSGLQSRLPESDEADYRACMLGLRDYVNKNGFKNVVLGLSGG 302 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+CAA+AVDALG+E V+TIMLPY+YTS +SL+DA ACAKALGC YDV+ I + V F Sbjct: 303 IDSAICAALAVDALGEERVRTIMLPYRYTSQESLKDAEACAKALGCYYDVVAIEEPVEGF 362 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM Sbjct: 363 LNALADTFEGTESGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDM 422 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGFNP+KDLYK QV+ L+ WRN LGP EVIP +I++K+PSAELRP+QTDQ+S Sbjct: 423 NGGFNPIKDLYKMQVYGLSRWRNGAVPPGALGPSGEVIPQNIIDKAPSAELRPNQTDQDS 482 Query: 483 LPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPYP+LDDI++ +VE E S +DE TV +EHLLY +EYKRRQ+ G KIT K Sbjct: 483 LPPYPVLDDILECLVERELSTEEIVARGHDEATVHRIEHLLYIAEYKRRQSAPGVKITKK 542 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N+FRD Sbjct: 543 NFGRDRRYPITNRFRDR 559 >gi|150396775|ref|YP_001327242.1| NAD synthetase [Sinorhizobium medicae WSM419] gi|150028290|gb|ABR60407.1| NAD+ synthetase [Sinorhizobium medicae WSM419] Length = 560 Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/555 (56%), Positives = 403/555 (72%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP VGDIAGN+ KAR AR A R+G DL+LFTELF+SGYPPEDLV K +F+ Sbjct: 11 LRIAVAQLNPTVGDIAGNMTKAREARAAAAREGADLLLFTELFLSGYPPEDLVLKPAFLS 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++ L ++T DGG GIV+GFPRQ NSV +LD G IIAVRDK++LPNY EF Sbjct: 71 ACEQAVEKLAAETADGGPGIVIGFPRQAAALRHNSVAVLDGGKIIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F +G P+ FR +R+GI +CEDIW + +C+ L + GAE L S N SPYY KL Sbjct: 131 EKRVFDAGEMPGPVNFRGVRIGIPVCEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKL 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY NQ+GGQDEL+FDGASF F+ + LAFQM F E ++E Sbjct: 191 DVRHQVVLRQVIETGLPMIYANQLGGQDELVFDGASFAFNADKSLAFQMSQFEEAVAVSE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W ++S + + +P + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WRRGAD----GWVSGNGLKSR-VP-EGEEADYRACMLGFRDYVNKNGFRNVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+C A+AVDALG+E V+T+MLPY+YTS +SL+DA ACA+ALGC+YD++ I + V F S Sbjct: 305 SAICTALAVDALGEERVRTVMLPYRYTSRESLQDAEACARALGCRYDIVAIEEPVEGFLS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + +GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDMFEGTEAGITEENLQSRTRGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN LGP EVIP +I++K+PSAELRP QTDQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNGTVPPGALGPSGEVIPQNIIDKAPSAELRPDQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E S + ++E TV +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMSTEDVVARGHEEATVHRIEHLLYIAEYKRRQSAPGVKITRKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|190892049|ref|YP_001978591.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli CIAT 652] gi|190697328|gb|ACE91413.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli CIAT 652] Length = 559 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/555 (57%), Positives = 398/555 (71%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+ KAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLTKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQD+ G NSV +LD G +IAVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTVDGGPGVIIGFPRQDENGRYNSVAVLDGGKVIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR IRLGI ICEDIW +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFHQGAMPGPVNFRGIRLGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSEFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + S W+ A IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGE--SGWHCAEGPMAR---IP-EGEEADYRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFEGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ L+ WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALSRWRNENVPPSALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 YP+LDDI++ +VE E + +D TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 AYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|218675144|ref|ZP_03524813.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli GR56] Length = 559 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/555 (57%), Positives = 400/555 (72%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+ GN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVTGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQD+ G NSV +LD G +IAVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTADGGPGVIIGFPRQDENGRYNSVAVLDGGKVIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI ICEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFHQGAMPGPVNFRGVRLGIPICEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADRSLAFQMSEFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + S W+ A IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGE--SGWHCAEGPMAR---IP-EGEEADYRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFEGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN + + LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNENVPPTALGPSGEVIPLNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + +D TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|15965599|ref|NP_385952.1| NAD synthetase [Sinorhizobium meliloti 1021] gi|307302719|ref|ZP_07582475.1| NAD+ synthetase [Sinorhizobium meliloti BL225C] gi|15074780|emb|CAC46425.1| Putative NH3-dependent NAD+ synthetase [Sinorhizobium meliloti 1021] gi|306903083|gb|EFN33674.1| NAD+ synthetase [Sinorhizobium meliloti BL225C] Length = 560 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/557 (56%), Positives = 403/557 (72%), Gaps = 11/557 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP VGDIAGN+AKAR AR A R+G DL+L TELFISGYPPEDLV K +F++ Sbjct: 11 LRIAVAQLNPTVGDIAGNVAKAREARTAAAREGADLLLLTELFISGYPPEDLVLKPAFLK 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++ L ++T DGG G+V+GFPRQ NSV +LD G +IA+RDK++LPNY EF Sbjct: 71 ACEQAVEKLAAETADGGPGVVIGFPRQAAGLRHNSVAVLDGGRVIAIRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F +G P+ FR +R+GI +CEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFDAGEMPGPVNFRGVRIGIPVCEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY NQ+GGQDEL+FDGASF F+ + LAFQM F E ++E Sbjct: 191 DVRHQVVLRQVIETGLPMIYANQLGGQDELVFDGASFAFNADKSLAFQMSQFEEAVAVSE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + ++S + + IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 W----KRGAGGWISANGLKSR-IP-EGEEADYRACMLGFRDYVNKNGFRNVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+C A+AVDALG+E V+T+MLPY+YTS +SL DA ACAKALGC+YD++ I + V F S Sbjct: 305 SAICTALAVDALGEERVRTVMLPYRYTSRESLRDAEACAKALGCRYDIVAIEEPVEGFLS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + +GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALADTFEGTEAGITEENLQSRTRGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN LGP EVIP +I++K+PSAELRP QTDQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNGTVPPGALGPSGEVIPQNIIDKAPSAELRPDQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 PYP+LDDI++ +VE E E + E + TV +EHLLY +EYKRRQ+ G KIT K Sbjct: 485 PYPVLDDILECLVEKEMSTEEIVARGHE--EATVHRIEHLLYIAEYKRRQSAPGVKITRK 542 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N+FRD Sbjct: 543 NFGRDRRYPITNRFRDR 559 >gi|327190628|gb|EGE57716.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli CNPAF512] Length = 559 Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/555 (58%), Positives = 399/555 (71%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+ GN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVTGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQD+ G NSV +LD G +IAVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTVDGGPGVIIGFPRQDENGRYNSVAVLDGGKVIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G PI FR IRLGI ICEDIW +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFHQGAMPGPINFRGIRLGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSEFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + S W+ A IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGE--SGWHCAEGPMAR---IP-EGEEADYRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFEGTDSGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ L+ WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALSRWRNENVPPSALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + +D TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|209549596|ref|YP_002281513.1| NAD synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535352|gb|ACI55287.1| NAD+ synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 559 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/555 (57%), Positives = 400/555 (72%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP+VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPMVGDVAGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQDQ G NSV +LD G +IAVRDKI+LPNY EF Sbjct: 71 ACWKAVESLAADTADGGPGVLIGFPRQDQTGRYNSVAVLDGGKVIAVRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +R+GI ICEDIW +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFNQGAMPGPVNFRGVRIGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP++Y Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLVYAAQLGGQDELVFDGASFAFNADKSLAFQMSQFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + + W+ A +IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WK--RGGAGWHCAEGPMA---HIP-EGEEADYRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+C AIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICTAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFAGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNENVPPSALGPSREVIPKNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYPILDDI++ +VE E + +D TV +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPILDDILECLVEKEMAVEEIVARGHDVVTVHRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|307318567|ref|ZP_07598001.1| NAD+ synthetase [Sinorhizobium meliloti AK83] gi|306895907|gb|EFN26659.1| NAD+ synthetase [Sinorhizobium meliloti AK83] Length = 560 Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/557 (56%), Positives = 403/557 (72%), Gaps = 11/557 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP VGDIAGN+AKAR AR A R+G DL+L TELFISGYPPEDLV K +F++ Sbjct: 11 LRIAVAQLNPTVGDIAGNVAKAREARTAAAREGADLLLLTELFISGYPPEDLVLKPAFLK 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++ L ++T DGG G+V+GFPRQ NSV +LD G +IA+RDK++LPNY EF Sbjct: 71 ACEQAVEKLAAETADGGPGVVIGFPRQAAGLRHNSVAVLDGGRVIAIRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F +G P+ FR +R+GI +CEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFDAGEMPGPVNFRGVRIGIPVCEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY NQ+GGQDEL+FDGASF F+ + LAFQM F E ++E Sbjct: 191 DVRHQVVLRQVIETGLPMIYANQLGGQDELVFDGASFAFNADKSLAFQMSQFEEAVAVSE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + ++S + + IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 W----KRGAGGWISANGLKSR-IP-EGEEADYRACMLGFRDYVNKNGFRNVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+C A+AVDALG+E V+T+MLPY+YTS +SL DA ACAKALGC+Y+++ I + V F S Sbjct: 305 SAICTALAVDALGEERVRTVMLPYRYTSRESLRDAEACAKALGCRYNIVAIEEPVEGFLS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + +GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALADTFEGTEAGITEENLQSRTRGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN LGP EVIP +I++K+PSAELRP QTDQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNGTVPPGALGPSGEVIPQNIIDKAPSAELRPDQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 PYP+LDDI++ +VE E E + E + TV +EHLLY +EYKRRQ+ G KIT K Sbjct: 485 PYPVLDDILECLVEKEMSTEEIVARGHE--EATVHRIEHLLYIAEYKRRQSAPGVKITRK 542 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N+FRD Sbjct: 543 NFGRDRRYPITNRFRDR 559 >gi|218663273|ref|ZP_03519203.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli IE4771] Length = 557 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/551 (57%), Positives = 398/551 (72%), Gaps = 7/551 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+V+GFPRQD+ G NSV +LD G ++AVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTADGGPGVVIGFPRQDETGRYNSVAVLDGGKVVAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI ICEDIW +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFHQGAMPGPVNFRGVRLGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADRSLAFQMSEFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + S W+ A IP ++EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGE--SGWHCAEGPMAR---IP-EDEEADYRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFEGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNENVPPSALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + +D TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNK 554 GRDR YPI+N+ Sbjct: 545 GRDRRYPITNR 555 >gi|116252435|ref|YP_768273.1| NAD synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|115257083|emb|CAK08177.1| putative glutamine-dependent nad(+) synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 559 Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/555 (56%), Positives = 399/555 (71%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L ++T DGG G+++GFPRQD G NSV +LD G +IAVRDKI+LPNY EF Sbjct: 71 ACWKAVESLAAETADGGPGVIIGFPRQDDTGRYNSVAVLDGGKVIAVRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +R+GI ICEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFDQGAMPGPVNFRGVRIGIPICEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLRQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSQFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W S W+ A +IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGD--SGWHCAEGPMA---HIP-ESEEADYRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CA+ALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCARALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALASLFEGTDSGITEENLQSRARGVILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ L+ WRN + LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALSRWRNENVPPGALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + +D TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|222086207|ref|YP_002544739.1| NAD(+) synthase (glutamine-hydrolysing) protein [Agrobacterium radiobacter K84] gi|221723655|gb|ACM26811.1| NAD(+) synthase (glutamine-hydrolysing) protein [Agrobacterium radiobacter K84] Length = 559 Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust. Identities = 310/559 (55%), Positives = 403/559 (72%), Gaps = 7/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 + + ++IA+AQLNP VGD++GN+ KAR AR EA R+G L+LFTELFISGYPPEDLV K Sbjct: 7 ITQTIRIAVAQLNPTVGDVSGNLVKAREARAEAAREGAQLVLFTELFISGYPPEDLVLKP 66 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +FI+AC A+++L +DT DGG G+++GFPRQD+ G NSV ++D G +I +RDK++LPNY Sbjct: 67 AFIRACWKAVESLAADTADGGPGVIIGFPRQDETGRYNSVAVIDGGKVIFIRDKVDLPNY 126 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 EF EKR F G P+ FR +R+GI ICE+IW + IC+ L + GAE L N SPYY Sbjct: 127 GEFDEKRVFDEGTIAGPVNFRGVRIGIPICEEIWNDLGICETLAESGAEILLVPNGSPYY 186 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K+ R+++V Q+ LP+++ QVGGQDE +FDGASF F+ + LAFQM F Sbjct: 187 RGKVDVRYQVVLRQVIESGLPLVFAAQVGGQDEYVFDGASFAFNADKSLAFQMSQFETAL 246 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T W + W+ A +IP + EEADY AC+L RDYV KN F V++GLS Sbjct: 247 AVTTWK--KNGDGWHCSEGPMA---HIP-EGEEADYRACLLGFRDYVNKNGFKSVVLGLS 300 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI + V Sbjct: 301 GGIDSAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEEPVT 360 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYG Sbjct: 361 GFTSALADLFEGTESGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYG 420 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNP+KDLYK QV+ L+ WRN H LGP EVIP +I++K+PSAELRP+QTDQ Sbjct: 421 DMNGGFNPIKDLYKMQVYALSRWRNLHVPPGALGPSGEVIPYNIIDKAPSAELRPNQTDQ 480 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYP LDDI++ +VE E + +D TV +EHLLY +EYKRRQ+ G +IT Sbjct: 481 DSLPPYPALDDILECLVEKEMAVDEIVARGHDVATVHRIEHLLYLAEYKRRQSAPGVRIT 540 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 541 TKNFGRDRRYPITNRFRDR 559 >gi|325293042|ref|YP_004278906.1| NH3-dependent NAD synthetase [Agrobacterium sp. H13-3] gi|325060895|gb|ADY64586.1| NH3-dependent NAD synthetase [Agrobacterium sp. H13-3] Length = 559 Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust. Identities = 313/555 (56%), Positives = 401/555 (72%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+ Q NP VGD+AGN+A+AR AR +A QG DL+L TELFISGYPPEDLV K +F++ Sbjct: 11 LRIAVGQFNPTVGDVAGNLARAREARADAATQGADLLLLTELFISGYPPEDLVLKPAFLK 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++ L ++T DGG G+V+GFPRQ + G NSV +LD G IIA+RDKI+LPNY EF Sbjct: 71 ACLKAVEELAAETADGGPGVVIGFPRQGETGRHNSVALLDGGKIIALRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + P FR +R+GI ICE+IW + +C+ L + GAE L N SPYY KL Sbjct: 131 EKRVFAEGSISGPYNFRGVRIGIPICEEIWNDMGVCETLAESGAEILLVPNGSPYYRGKL 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++ Q+ LP+++ NQ+GGQDEL+FDGASF F+ + LAFQM F +T+ Sbjct: 191 DVRHQVALKQVIESGLPLVFANQLGGQDELVFDGASFGFNADKTLAFQMSQFEATLAVTD 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + W +S IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WK--RTAEGWRC---ESGPFSKIP-EGEEADYRACMLGFRDYVNKNGFKSVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+AVDALG+E V+ IMLPY+YTS SL+DAA CA+ALGC+YD++PI + V+ F S Sbjct: 305 SAICAALAVDALGEERVRCIMLPYRYTSEDSLKDAADCARALGCRYDIVPIAEPVDGFLS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S+ + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSEMFEGTEEGITEENLQSRTRGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ ++SWRNSH LGP EVIP +I+ K+PSAELRP+QTDQ+SLP Sbjct: 425 GFNPIKDLYKMQVYAISSWRNSHVPPGALGPSGEVIPANIISKAPSAELRPNQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E S +D TV +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMSVEEILARGHDIATVHRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|15888965|ref|NP_354646.1| NAD synthetase [Agrobacterium tumefaciens str. C58] gi|15156746|gb|AAK87431.1| NAD (+) synthetase [Agrobacterium tumefaciens str. C58] Length = 559 Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust. Identities = 314/555 (56%), Positives = 402/555 (72%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+ Q NP VGD+AGN+A+AR AR +A QG DL+L TELFISGYPPEDLV K +F++ Sbjct: 11 LRIAVGQFNPTVGDVAGNLARAREARADAATQGADLLLLTELFISGYPPEDLVLKPAFLK 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++ L ++T DGG G+V+GFPRQ + G NSV +LD G IIA+RDKI+LPNY EF Sbjct: 71 ACLKAVEELAAETADGGPGVVIGFPRQGETGRHNSVALLDGGKIIALRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + P FR +R+GI ICE+IW + +C+ L + GAE L N SPYY KL Sbjct: 131 EKRVFEEGSISGPYNFRGVRIGIPICEEIWNDMGVCETLAESGAEILLVPNGSPYYRGKL 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++ Q+ LP+++ NQ+GGQDEL+FDGASF F+ + LAFQM F +T+ Sbjct: 191 DVRHQVALRQVIESGLPLVFANQLGGQDELVFDGASFGFNADKTLAFQMSQFEATLAVTD 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + W+ DS IP + EEADY AC+L RDYV KN F V++GLSGGID Sbjct: 251 WK--RTADGWHC---DSGPFSKIP-EGEEADYRACMLGFRDYVNKNGFKSVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+AVDALG+E V+ IMLPY+YTS +SL+DAA CA+ALGC+YD++PI + V F S Sbjct: 305 SAICAALAVDALGEERVRCIMLPYRYTSEESLKDAADCARALGCRYDIVPIVEPVEGFLS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S+ + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSELFEGTEEGITEENLQSRTRGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ ++SWRN+H LGP EVIP +I+ K+PSAELRP+QTDQ+SLP Sbjct: 425 GFNPIKDLYKMQVYAISSWRNAHVPPGALGPSGEVIPANIIAKAPSAELRPNQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E S +D TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMSVEEILARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|163759637|ref|ZP_02166722.1| putative glutamine-dependent NAD(+) synthetase [Hoeflea phototrophica DFL-43] gi|162283234|gb|EDQ33520.1| putative glutamine-dependent NAD(+) synthetase [Hoeflea phototrophica DFL-43] Length = 562 Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust. Identities = 300/557 (53%), Positives = 386/557 (69%), Gaps = 10/557 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP VGD+AGN+AKAR AR +A+R G D++LFTELFI GYPPEDLV K + I+ Sbjct: 13 LRIAVAQLNPTVGDVAGNLAKAREARADAHRHGADIVLFTELFIVGYPPEDLVLKPALIR 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +C A++ L +DT DGG +++G+PR D NSV +LD G ++ RDK++LPNY EF Sbjct: 73 SCLKAVNELAADTADGGPAVIIGYPRSDDGKRHNSVAVLDGGKLVTSRDKVDLPNYGEFD 132 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ R +RLGI ICEDIW + +C+ L + GAE L N SPYY K+ Sbjct: 133 EKRVFDVGEMPGPVAIRGVRLGIPICEDIWGDLGVCETLAESGAEILLVPNGSPYYRGKV 192 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+++ NQVGGQDEL+FDGASF + + L FQM F E + Sbjct: 193 DVRHQVVLRQVIESGLPMVFANQVGGQDELVFDGASFAMNADKSLGFQMSQFEETVSIVT 252 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + Q W M + + EEADY AC+L LRDYV KN F V++GLSGGID Sbjct: 253 FKR-QDDGTWRC----KPGPMSVVPEGEEADYRACMLGLRDYVNKNGFRNVVLGLSGGID 307 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SALCAA+AVDALG+E V+T+MLPY+YTS S DA ACA+ALGC YD + I + V F S Sbjct: 308 SALCAALAVDALGEERVRTVMLPYRYTSESSFTDAEACARALGCHYDTVAIEEPVQGFLS 367 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 368 ALGEMFEGTDEGITEENLQSRARGVILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 427 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ L+ WRN+H LGP EVIP +I+ K+PSAELRP QTDQ+SLP Sbjct: 428 GFNPIKDLYKLQVYALSRWRNAHVPPGALGPSGEVIPVNIINKAPSAELRPDQTDQDSLP 487 Query: 485 PYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 PY +LDDI++ +VE+E E + + TV +EHLLY +EYKRRQ+ G KIT K Sbjct: 488 PYEVLDDILECLVEHEMGVEEIVARGHDI--ATVHRIEHLLYIAEYKRRQSAPGVKITRK 545 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N++RD Sbjct: 546 NFGRDRRYPITNRYRDR 562 >gi|239831980|ref|ZP_04680309.1| NAD+ synthetase [Ochrobactrum intermedium LMG 3301] gi|239824247|gb|EEQ95815.1| NAD+ synthetase [Ochrobactrum intermedium LMG 3301] Length = 561 Score = 625 bits (1611), Expect = e-177, Method: Compositional matrix adjust. Identities = 310/558 (55%), Positives = 398/558 (71%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNPV+GDIAGN+AKAR AR EA R DLILFTELFISGYPPEDLV K S Sbjct: 10 LAMLRIAVAQLNPVMGDIAGNLAKARAARAEAARMQADLILFTELFISGYPPEDLVLKPS 69 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P + G+ NS+ +LD G +IA R K++LPNY Sbjct: 70 FLAACEKAVRDLANDTADGGPGVIIGTPLSRESGLHNSIAVLDGGEVIAERFKVDLPNYG 129 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F SG P+ FR +R+GI ICEDIW + + L + GAE L N SPY+ Sbjct: 130 EFDEKRVFQSGPMPGPVNFRGVRIGIPICEDIWGELGVAETLAESGAEILLVPNGSPYHR 189 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LP++Y NQVGGQDEL+FDG SF F+ + L QM F+EQ Sbjct: 190 AKMDRRHQVVLKQVIETELPMVYANQVGGQDELVFDGGSFAFNADRSLCLQMPQFAEQIV 249 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +T WH + W + A +P + EADY+AC+L LRDYV KN F V++GLSG Sbjct: 250 LTVWHRNND--GWRCEEGEKAD---LP-EGLEADYSACMLGLRDYVNKNGFKDVVLGLSG 303 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ IMLPY+YTS +SL+DAA CAKALG +YD++PI V Sbjct: 304 GIDSAICAALGVDALGKDRVRCIMLPYRYTSDESLKDAADCAKALGVRYDIVPIAAPVEG 363 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 364 FLEALYPLFSGTESGVTEENLQSRARGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGD 423 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ ++ WRN+H T LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 424 MNGGFNPIKDVYKMQVYAMSEWRNNHVPTGALGPSGEVIPQNIISKAPSAELRENQTDQD 483 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S + ++ ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 484 SLPPYPVLDDILECLVENEMSNTEIAARGHSLETVQRIEHLLYLAEYKRRQSAPGVKITK 543 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 544 KNFGRDRRYPITNRFRDR 561 >gi|260463957|ref|ZP_05812153.1| NAD+ synthetase [Mesorhizobium opportunistum WSM2075] gi|259030332|gb|EEW31612.1| NAD+ synthetase [Mesorhizobium opportunistum WSM2075] Length = 558 Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust. Identities = 311/563 (55%), Positives = 395/563 (70%), Gaps = 16/563 (2%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IAIAQLNP VGD+AGN+AKAR AR +A RQG DL+L+TELF++GYPPEDLV K + Sbjct: 5 LDILRIAIAQLNPTVGDVAGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLVLKPA 64 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++AC A +DT DGG G+++G P + + G NS+V D G IIA R K++LPNY Sbjct: 65 FLKACEKAAQDFAADTADGGPGVIIGTPLKRKSGTHNSIVFADGGKIIAERYKLDLPNYG 124 Query: 122 EFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 EF EKR F +G P+ FR +RLGI ICEDIW IC+ L + GAE L N SPYY Sbjct: 125 EFDEKRVFQAGPEIQGPVNFRGVRLGIPICEDIWGEVGICETLAESGAEILLVPNGSPYY 184 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K+ RH++V Q+ LPIIY NQ+GGQDELIFDGASF + LAFQM F + Sbjct: 185 RAKIDVRHQVVIRQVIECGLPIIYANQLGGQDELIFDGASFAIGADKTLAFQMSQFEDAV 244 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPL----QEEEADYNACVLSLRDYVQKNNFHKVI 296 +T W +DD + P+ + EEADY AC+L LRDYV KN F V+ Sbjct: 245 DVTTWK----------RTDDGWACAEGPMSKIPEREEADYRACMLGLRDYVNKNGFKNVV 294 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSA+CAA+AVDALG+E ++ +M+PY+YTS SL+DA CA+ALGC+YD++PI Sbjct: 295 LGLSGGIDSAICAALAVDALGEERLRAVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIF 354 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + V F ++Q + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY Sbjct: 355 EPVEGFLHALTQLFEGTKEGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYA 414 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGFNP+KDLYK QV+ L+ WRNSH LGP EVIP +I++K+PSAELR + Sbjct: 415 TLYGDMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELREN 474 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLPPYP+LDDI++ +VENE + +D TV +EHLLY +EYKRRQA G Sbjct: 475 QTDQDSLPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPG 534 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 KIT K+FGRDR YPI+N+FRD Sbjct: 535 VKITRKNFGRDRRYPITNRFRDR 557 >gi|153009427|ref|YP_001370642.1| NAD synthetase [Ochrobactrum anthropi ATCC 49188] gi|151561315|gb|ABS14813.1| NAD+ synthetase [Ochrobactrum anthropi ATCC 49188] Length = 559 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 307/558 (55%), Positives = 394/558 (70%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP++GDIAGN+ KAR AR EA R DLILFTELFISGYPPEDLV K S Sbjct: 8 LAMLRIAVAQLNPIMGDIAGNLTKARAARAEAARMKADLILFTELFISGYPPEDLVLKPS 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L SDT DGG G+++G P + G+ NS+ +LD G IIA R K++LPNY Sbjct: 68 FLAACEKAVRALASDTADGGPGVIIGTPLSRESGLHNSIAVLDGGEIIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F +G P+ FR +R+GI ICEDIW + + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFQAGPMPGPVNFRGVRIGIPICEDIWGELGVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LP++Y NQVGGQDEL+FDG SF F+ + L Q+ F EQ Sbjct: 188 AKMDRRHQVVLKQVIETELPMVYANQVGGQDELVFDGGSFAFNTDRSLCLQLPQFEEQIT 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +T W + W + A I + EADY+AC+L LRDYV KN F V++GLSG Sbjct: 248 LTVWRREND--GWRCEEGEKA----ILPEGLEADYSACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ IMLPY+YTS +SL+DAA CAKALG +YD++PI V Sbjct: 302 GIDSAICAALGVDALGKDRVRCIMLPYRYTSDESLKDAADCAKALGVRYDIVPISAPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FLEALHPLFEGTESGVTEENLQSRARGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ ++ WRNSH LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYAMSEWRNSHVPNGALGPSGEVIPHNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S ++ + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLVENEMSNTEIAERGHPLETVQRIEHLLYLAEYKRRQSAPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|319783805|ref|YP_004143281.1| NAD+ synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169693|gb|ADV13231.1| NAD+ synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 558 Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust. Identities = 311/559 (55%), Positives = 398/559 (71%), Gaps = 8/559 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP VGDI+GN+AKAR AR +A RQG DL+L+TELF++GYPPEDLV K + Sbjct: 5 LDILRIAVAQLNPTVGDISGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLVLKPA 64 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++AC A +DT DGG G+++G P + + G NS++ D G IIA R K++LPNY Sbjct: 65 FLKACEKAAQDFAADTADGGPGVIIGTPLKRKSGTHNSIIFADGGKIIAERYKLDLPNYG 124 Query: 122 EFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 EF EKR F +G P+ FR +R+GI ICEDIW + +IC+ L + GAE L N SPYY Sbjct: 125 EFDEKRVFQAGPEIQGPVNFRGVRIGIPICEDIWGDVDICETLAESGAEILLVPNGSPYY 184 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K+ RH++V Q+ LP+IY NQ+GGQDELIFDGASF + LAFQM F E Sbjct: 185 RAKIDVRHQVVIRQVIECGLPMIYANQLGGQDELIFDGASFAIGADKTLAFQMSQFEEAV 244 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T W +Q W S+ S IP EEADY AC+L LRDYV KN F V++GLS Sbjct: 245 DVTTWK--RQGDHW-VCSEGPMSK--IP-DREEADYRACMLGLRDYVNKNGFKNVVLGLS 298 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+CAA+AVDALG+E ++ +M+PY+YTS SL+DA CA+ALGC+YD++PI + V Sbjct: 299 GGIDSAICAALAVDALGEERLRAVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIFEPVE 358 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++Q + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYG Sbjct: 359 GFLHALTQMFEGTKEGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYG 418 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNP+KDLYK QV+ L+ WRNSH LGP EVIP +I++K+PSAELR +QTDQ Sbjct: 419 DMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELRENQTDQ 478 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYP+LDDI++ +VENE + +D TV +EHLLY +EYKRRQA G KIT Sbjct: 479 DSLPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPGVKIT 538 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 539 KKNFGRDRRYPITNRFRDR 557 >gi|13470971|ref|NP_102540.1| NAD synthetase [Mesorhizobium loti MAFF303099] gi|14021714|dbj|BAB48326.1| NH3-dependent NAD synthetase [Mesorhizobium loti MAFF303099] Length = 558 Score = 619 bits (1595), Expect = e-175, Method: Compositional matrix adjust. Identities = 312/563 (55%), Positives = 398/563 (70%), Gaps = 11/563 (1%) Query: 1 MLKK---LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 M KK L+IAIAQLNP VGD+AGN+AKAR AR +A RQG DL+L+TELF++GYPPEDLV Sbjct: 1 MTKKPDILRIAIAQLNPTVGDVAGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLV 60 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 K +F++AC A +DT DGG G+++G P + + G NS+++ D G IIA R K++L Sbjct: 61 LKPAFLKACEKAAQEFAADTSDGGPGVIIGTPLKRKSGTHNSIIVADGGKIIAERYKLDL 120 Query: 118 PNYSEFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 PNY EF EKR F +G P+ FR +R+GI ICEDIW + IC+ L + GAE L N Sbjct: 121 PNYGEFDEKRVFQAGPEIQGPVNFRGVRIGIPICEDIWGDVGICESLAESGAEILLVPNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPYY K+ R+++V QI LPI Y NQ+GGQDELIFDGASF + LAFQM F Sbjct: 181 SPYYRAKIDVRYQVVIRQIIECGLPITYANQLGGQDELIFDGASFAIGADKTLAFQMSQF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + W + W S+ S IP + EEADY AC+L LRDYV KN F V+ Sbjct: 241 EEAVDVVTWKRGE--DGW-VCSEGPMSK--IP-EREEADYRACMLGLRDYVNKNGFKNVV 294 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSA+CAA+AVDALG+E ++ +M+PY+YTS SL+DA CA+ALGC+YD++PI Sbjct: 295 LGLSGGIDSAICAALAVDALGEERLRAVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIF 354 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + V F ++Q + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY Sbjct: 355 EPVEGFLHALTQLFEGTKEGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYA 414 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGFNP+KDLYK QV+ L+ WRNSH LGP EVIP +I++K+PSAELR + Sbjct: 415 TLYGDMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELREN 474 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLPPYP+LDDI++ +VENE + +D TV +EHLLY +EYKRRQA G Sbjct: 475 QTDQDSLPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPG 534 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 KIT K+FGRDR YPI+N+FRD Sbjct: 535 VKITRKNFGRDRRYPITNRFRDR 557 >gi|306843889|ref|ZP_07476484.1| NAD+ synthetase [Brucella sp. BO1] gi|306275644|gb|EFM57368.1| NAD+ synthetase [Brucella sp. BO1] Length = 559 Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust. Identities = 307/558 (55%), Positives = 391/558 (70%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K + Sbjct: 8 LTMLRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY Sbjct: 68 FVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ Sbjct: 188 AKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW D W + AS +P + ADY AC+L LRDYV KN F V++GLSG Sbjct: 248 LTEWQRDG--GGWRCGDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CA+ALG +YD++PI + V Sbjct: 302 GIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCARALGVRYDIVPIAEPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FMNALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ L+ WRN H LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYALSQWRNHHLPQGALGPAGEVIPQNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|261214001|ref|ZP_05928282.1| NAD+ synthetase [Brucella abortus bv. 3 str. Tulya] gi|260915608|gb|EEX82469.1| NAD+ synthetase [Brucella abortus bv. 3 str. Tulya] Length = 559 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 307/558 (55%), Positives = 392/558 (70%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K + Sbjct: 8 LTMLRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY Sbjct: 68 FVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM+ F+EQ Sbjct: 188 AKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMQQFAEQIA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW D W + AS +P + ADY AC+L LRDYV KN F V++GLSG Sbjct: 248 LTEWQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V Sbjct: 302 GIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FMNALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|261317648|ref|ZP_05956845.1| NAD+ synthetase [Brucella pinnipedialis B2/94] gi|265988683|ref|ZP_06101240.1| NAD+ synthetase [Brucella pinnipedialis M292/94/1] gi|261296871|gb|EEY00368.1| NAD+ synthetase [Brucella pinnipedialis B2/94] gi|264660880|gb|EEZ31141.1| NAD+ synthetase [Brucella pinnipedialis M292/94/1] Length = 559 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 307/558 (55%), Positives = 392/558 (70%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K + Sbjct: 8 LTMLRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY Sbjct: 68 FVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ FR +RLGI +CEDIW ++ + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELDVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ Sbjct: 188 AKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW D W + AS +P + ADY AC+L LRDYV KN F V++GLSG Sbjct: 248 LTEWQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V Sbjct: 302 GIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FMNALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|17987252|ref|NP_539886.1| NAD synthetase [Brucella melitensis bv. 1 str. 16M] gi|225852520|ref|YP_002732753.1| NAD synthetase [Brucella melitensis ATCC 23457] gi|260564019|ref|ZP_05834505.1| NAD+ synthase [Brucella melitensis bv. 1 str. 16M] gi|265991097|ref|ZP_06103654.1| NAD+ synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265999470|ref|ZP_05466523.2| NAD(+) synthase [Brucella melitensis bv. 2 str. 63/9] gi|17982927|gb|AAL52150.1| glutamine-dependent nad(+) synthetase [Brucella melitensis bv. 1 str. 16M] gi|225640885|gb|ACO00799.1| NAD+ synthetase [Brucella melitensis ATCC 23457] gi|260154035|gb|EEW89127.1| NAD+ synthase [Brucella melitensis bv. 1 str. 16M] gi|263001881|gb|EEZ14456.1| NAD+ synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094135|gb|EEZ18057.1| NAD(+) synthase [Brucella melitensis bv. 2 str. 63/9] gi|326538745|gb|ADZ86960.1| NAD+ synthetase [Brucella melitensis M5-90] Length = 559 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 307/558 (55%), Positives = 391/558 (70%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K + Sbjct: 8 LTMLRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY Sbjct: 68 FVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ Sbjct: 188 AKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW D W + AS +P + ADY AC+L LRDYV KN F V++GLSG Sbjct: 248 LTEWQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V Sbjct: 302 GIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FMNALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|161618967|ref|YP_001592854.1| NAD synthetase [Brucella canis ATCC 23365] gi|163843283|ref|YP_001627687.1| NAD synthetase [Brucella suis ATCC 23445] gi|225627493|ref|ZP_03785530.1| NAD+ synthetase [Brucella ceti str. Cudo] gi|260566446|ref|ZP_05836916.1| NAD+ synthase [Brucella suis bv. 4 str. 40] gi|261218645|ref|ZP_05932926.1| NAD+ synthetase [Brucella ceti M13/05/1] gi|261222183|ref|ZP_05936464.1| NAD+ synthetase [Brucella ceti B1/94] gi|261314259|ref|ZP_05953456.1| NAD+ synthetase [Brucella pinnipedialis M163/99/10] gi|261321857|ref|ZP_05961054.1| NAD+ synthetase [Brucella ceti M644/93/1] gi|261752317|ref|ZP_05996026.1| NAD+ synthetase [Brucella suis bv. 5 str. 513] gi|261754975|ref|ZP_05998684.1| NAD+ synthetase [Brucella suis bv. 3 str. 686] gi|261758202|ref|ZP_06001911.1| NAD(+) synthase [Brucella sp. F5/99] gi|265998147|ref|ZP_06110704.1| NAD+ synthetase [Brucella ceti M490/95/1] gi|294852395|ref|ZP_06793068.1| NAD+ synthase [Brucella sp. NVSL 07-0026] gi|161335778|gb|ABX62083.1| NAD+ synthetase [Brucella canis ATCC 23365] gi|163674006|gb|ABY38117.1| NAD+ synthetase [Brucella suis ATCC 23445] gi|225617498|gb|EEH14543.1| NAD+ synthetase [Brucella ceti str. Cudo] gi|260155964|gb|EEW91044.1| NAD+ synthase [Brucella suis bv. 4 str. 40] gi|260920767|gb|EEX87420.1| NAD+ synthetase [Brucella ceti B1/94] gi|260923734|gb|EEX90302.1| NAD+ synthetase [Brucella ceti M13/05/1] gi|261294547|gb|EEX98043.1| NAD+ synthetase [Brucella ceti M644/93/1] gi|261303285|gb|EEY06782.1| NAD+ synthetase [Brucella pinnipedialis M163/99/10] gi|261738186|gb|EEY26182.1| NAD(+) synthase [Brucella sp. F5/99] gi|261742070|gb|EEY29996.1| NAD+ synthetase [Brucella suis bv. 5 str. 513] gi|261744728|gb|EEY32654.1| NAD+ synthetase [Brucella suis bv. 3 str. 686] gi|262552615|gb|EEZ08605.1| NAD+ synthetase [Brucella ceti M490/95/1] gi|294820984|gb|EFG37983.1| NAD+ synthase [Brucella sp. NVSL 07-0026] Length = 559 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 307/558 (55%), Positives = 391/558 (70%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K + Sbjct: 8 LTMLRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY Sbjct: 68 FVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ Sbjct: 188 AKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW D W + AS +P + ADY AC+L LRDYV KN F V++GLSG Sbjct: 248 LTEWQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V Sbjct: 302 GIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FMNALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|254693729|ref|ZP_05155557.1| NAD synthetase [Brucella abortus bv. 3 str. Tulya] Length = 550 Score = 615 bits (1586), Expect = e-174, Method: Compositional matrix adjust. Identities = 306/555 (55%), Positives = 391/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM+ F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMQQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D W + AS +P + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|254710099|ref|ZP_05171910.1| NAD synthetase [Brucella pinnipedialis B2/94] gi|256031595|ref|ZP_05445209.1| NAD synthetase [Brucella pinnipedialis M292/94/1] Length = 550 Score = 615 bits (1586), Expect = e-174, Method: Compositional matrix adjust. Identities = 306/555 (55%), Positives = 391/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW ++ + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELDVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D W + AS +P + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|265994934|ref|ZP_06107491.1| NAD+ synthetase [Brucella melitensis bv. 3 str. Ether] gi|262766047|gb|EEZ11836.1| NAD+ synthetase [Brucella melitensis bv. 3 str. Ether] Length = 559 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 307/558 (55%), Positives = 391/558 (70%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K + Sbjct: 8 LTMLRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY Sbjct: 68 FVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ Sbjct: 188 AKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW D W + AS +P + ADY AC+L LRDYV KN F V++GLSG Sbjct: 248 LTEWQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V Sbjct: 302 GIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FMNALQPLFSGTDSGVTEENLQSRARGAILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|256044673|ref|ZP_05447577.1| NAD synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|326409035|gb|ADZ66100.1| NAD synthetase [Brucella melitensis M28] Length = 550 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 306/555 (55%), Positives = 390/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D W + AS +P + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|23501895|ref|NP_698022.1| NAD synthetase [Brucella suis 1330] gi|254701766|ref|ZP_05163594.1| NAD synthetase [Brucella suis bv. 5 str. 513] gi|254704307|ref|ZP_05166135.1| NAD synthetase [Brucella suis bv. 3 str. 686] gi|254706790|ref|ZP_05168618.1| NAD synthetase [Brucella pinnipedialis M163/99/10] gi|254714100|ref|ZP_05175911.1| NAD synthetase [Brucella ceti M644/93/1] gi|254716843|ref|ZP_05178654.1| NAD synthetase [Brucella ceti M13/05/1] gi|256159733|ref|ZP_05457480.1| NAD synthetase [Brucella ceti M490/95/1] gi|256254996|ref|ZP_05460532.1| NAD synthetase [Brucella ceti B1/94] gi|256369438|ref|YP_003106946.1| NAD(+) synthase [Brucella microti CCM 4915] gi|260168725|ref|ZP_05755536.1| NAD synthetase [Brucella sp. F5/99] gi|23347836|gb|AAN29937.1| NH(3)-dependent NAD+ synthetase [Brucella suis 1330] gi|255999598|gb|ACU47997.1| NAD(+) synthase [Brucella microti CCM 4915] Length = 550 Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust. Identities = 306/555 (55%), Positives = 390/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D W + AS +P + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|189024180|ref|YP_001934948.1| NAD synthetase [Brucella abortus S19] gi|237815439|ref|ZP_04594437.1| NAD+ synthetase [Brucella abortus str. 2308 A] gi|260545314|ref|ZP_05821055.1| NAD+ synthetase [Brucella abortus NCTC 8038] gi|260754749|ref|ZP_05867097.1| NAD+ synthetase [Brucella abortus bv. 6 str. 870] gi|260757972|ref|ZP_05870320.1| NAD+ synthetase [Brucella abortus bv. 4 str. 292] gi|260761795|ref|ZP_05874138.1| NAD+ synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260883770|ref|ZP_05895384.1| NAD+ synthetase [Brucella abortus bv. 9 str. C68] gi|297248338|ref|ZP_06932056.1| NAD+ synthase [Brucella abortus bv. 5 str. B3196] gi|189019752|gb|ACD72474.1| NAD(+) synthase [Brucella abortus S19] gi|237790276|gb|EEP64486.1| NAD+ synthetase [Brucella abortus str. 2308 A] gi|260096721|gb|EEW80596.1| NAD+ synthetase [Brucella abortus NCTC 8038] gi|260668290|gb|EEX55230.1| NAD+ synthetase [Brucella abortus bv. 4 str. 292] gi|260672227|gb|EEX59048.1| NAD+ synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674857|gb|EEX61678.1| NAD+ synthetase [Brucella abortus bv. 6 str. 870] gi|260873298|gb|EEX80367.1| NAD+ synthetase [Brucella abortus bv. 9 str. C68] gi|297175507|gb|EFH34854.1| NAD+ synthase [Brucella abortus bv. 5 str. B3196] Length = 559 Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust. Identities = 306/558 (54%), Positives = 391/558 (70%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K + Sbjct: 8 LTMLRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY Sbjct: 68 FVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LPI+Y NQVGGQD+L+FDG SF F+ + L QM F+EQ Sbjct: 188 AKMDRRHQVVLKQVIETGLPIVYANQVGGQDDLVFDGGSFVFNADKSLCLQMPQFAEQIA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW D W + AS +P + ADY AC+L LRDYV KN F V++GLSG Sbjct: 248 LTEWQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V Sbjct: 302 GIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FMNALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|265984081|ref|ZP_06096816.1| NAD+ synthetase [Brucella sp. 83/13] gi|306838375|ref|ZP_07471220.1| NAD+ synthetase [Brucella sp. NF 2653] gi|264662673|gb|EEZ32934.1| NAD+ synthetase [Brucella sp. 83/13] gi|306406515|gb|EFM62749.1| NAD+ synthetase [Brucella sp. NF 2653] Length = 559 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 305/558 (54%), Positives = 390/558 (69%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K + Sbjct: 8 LTMLRIAVAQLNPTMGDIAGNLAKARAARSEAARMQADLILFTELFISGYPPEDMVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY Sbjct: 68 FVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LPI+Y NQVGGQDEL+FDG +F F+ + L QM F+EQ Sbjct: 188 AKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGTFVFNADKSLCLQMPQFAEQIA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW D W AS +P + ADY AC+L LRDYV KN F V++GLSG Sbjct: 248 LTEWQRDG--DGWRCGDGKKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CA+ALG +YD++PI + V Sbjct: 302 GIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCARALGVRYDIVPIAEPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FMNALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLVENEMSNAEIVARGHTLETVQRIEHLLYLAEYKRRQSAPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|256113567|ref|ZP_05454387.1| NAD synthetase [Brucella melitensis bv. 3 str. Ether] Length = 550 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 306/555 (55%), Positives = 390/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D W + AS +P + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGAILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|148560440|ref|YP_001258955.1| NAD synthetase [Brucella ovis ATCC 25840] gi|148371697|gb|ABQ61676.1| NH(3)-dependent NAD+ synthetase [Brucella ovis ATCC 25840] Length = 550 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 306/555 (55%), Positives = 390/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D W + AS +P + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRHYPITNRFRDR 550 >gi|62289938|ref|YP_221731.1| NAD synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699865|ref|YP_414439.1| NAD synthetase [Brucella melitensis biovar Abortus 2308] gi|254689244|ref|ZP_05152498.1| NAD synthetase [Brucella abortus bv. 6 str. 870] gi|254697379|ref|ZP_05159207.1| NAD synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254730277|ref|ZP_05188855.1| NAD synthetase [Brucella abortus bv. 4 str. 292] gi|256257494|ref|ZP_05463030.1| NAD synthetase [Brucella abortus bv. 9 str. C68] gi|62196070|gb|AAX74370.1| NadE, NH(3)-dependent NAD+ synthetase [Brucella abortus bv. 1 str. 9-941] gi|82615966|emb|CAJ10989.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase:NAD+ synthase [Brucella melitensis biovar Abortus 2308] Length = 550 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 305/555 (54%), Positives = 390/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQD+L+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDDLVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D W + AS +P + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|254719091|ref|ZP_05180902.1| NAD synthetase [Brucella sp. 83/13] Length = 550 Score = 612 bits (1578), Expect = e-173, Method: Compositional matrix adjust. Identities = 304/555 (54%), Positives = 389/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARAARSEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG +F F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGTFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D W AS +P + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDG--DGWRCGDGKKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CA+ALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCARALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHTLETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|261325107|ref|ZP_05964304.1| NAD+ synthetase [Brucella neotomae 5K33] gi|261301087|gb|EEY04584.1| NAD+ synthetase [Brucella neotomae 5K33] Length = 559 Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust. Identities = 304/558 (54%), Positives = 390/558 (69%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K + Sbjct: 8 LTMLRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC A+ L +DT DGG G+++G P G N+V +LD G +IA R K++LPNY Sbjct: 68 FVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEVIAERFKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G + FR +RLGI +CEDIW + + L + GAE L N SPY+ Sbjct: 128 EFDEKRVFEPGPMPGQVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ Sbjct: 188 AKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW D W + AS +P + ADY AC+L LRDYV KN F V++GLSG Sbjct: 248 LTEWQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V Sbjct: 302 GIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FMNALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+ Sbjct: 422 MNGGFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP+LDDI++ ++ENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT Sbjct: 482 SLPPYPVLDDILECLIENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITK 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|256061106|ref|ZP_05451260.1| NAD synthetase [Brucella neotomae 5K33] Length = 550 Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust. Identities = 303/555 (54%), Positives = 389/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G +IA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEVIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGQVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D W + AS +P + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDG--DGWRCRDGEKAS---LP-EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ ++ENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLIENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|49475433|ref|YP_033474.1| NAD synthetase [Bartonella henselae str. Houston-1] gi|49238239|emb|CAF27449.1| NH3-dependent NAD synthetase [Bartonella henselae str. Houston-1] Length = 559 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 293/559 (52%), Positives = 390/559 (69%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++A+AQLNP+VGDI GN + A A ++A +G +L+LFTELFIS YPPEDLV K Sbjct: 6 MKNDFRVAVAQLNPIVGDIEGNFSLAVMAHQKAKEEGANLVLFTELFISAYPPEDLVLKP 65 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F +AC A+ L T GG GIV+G P + + + N VV+LD G I+ K +LPNY Sbjct: 66 AFTKACEDAVKKLAKLTK-GGPGIVIGLPLRHSDNIYNGVVLLDEGRIVTESLKFDLPNY 124 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +EF EKR F SG +PIV+ ++LGI+ICEDIW + ++C L +GAE + LN SPY+ Sbjct: 125 AEFDEKRVFSSGPRPEPIVYHGLKLGIVICEDIWNDFSLCAELANKGAEIILVLNGSPYH 184 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK+ KR E+V Q L I+Y NQVGGQDEL+FDG SF +GQ ++ FQMKHF +N Sbjct: 185 RNKILKRIEVVRAQALQSGLSIVYANQVGGQDELVFDGGSFALNGQGKMVFQMKHF--EN 242 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + H+ ++ + W +S + + L ADY ACVL LRDYV KN F VI+GLS Sbjct: 243 HIALSHWQKKTAGWQCVSGPNETL----LNGLAADYQACVLGLRDYVNKNRFQNVILGLS 298 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALC +AVDALG E V+T+M+PY YTS +SL+DA CA LGC+Y+++PI V Sbjct: 299 GGIDSALCTTMAVDALGAEKVRTVMMPYHYTSQESLKDAKECAHLLGCRYEIIPIVQPVE 358 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F M+ PS + EN+QSR+RG ILMALSN +M++TT NKSE++VGY TLYG Sbjct: 359 VFLKTMAPVFLGLPSDVTEENLQSRVRGVILMALSNKFGSMVVTTGNKSEMAVGYATLYG 418 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKD+YKTQV+ LA WRN + + + GP VIPP+I+ K+PSAELR +Q D+ Sbjct: 419 DMNGGFNPLKDVYKTQVYALAQWRNQNHLQNLKGPEGVVIPPNIIAKAPSAELRENQKDE 478 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYPILDDI++ ++E++ S + + Y ETV +EHL+YG+EYKRRQ+ G KI+ Sbjct: 479 DSLPPYPILDDILQSLIEDDMSVCDIIKRGYLRETVEKIEHLIYGAEYKRRQSAPGVKIS 538 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+FGRDR YPI N+FR++ Sbjct: 539 YKNFGRDRRYPIVNRFRNN 557 >gi|110633816|ref|YP_674024.1| NAD synthetase [Mesorhizobium sp. BNC1] gi|110284800|gb|ABG62859.1| NH(3)-dependent NAD(+) synthetase [Chelativorans sp. BNC1] Length = 572 Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust. Identities = 307/560 (54%), Positives = 398/560 (71%), Gaps = 6/560 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IA+AQLNP VGDI GN+AKAR AR +A R+G DL+LFTELFI+GYPPEDLV K +F+ Sbjct: 12 FRIAVAQLNPTVGDIPGNLAKAREARADAARKGADLVLFTELFIAGYPPEDLVLKPAFVA 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L ++T DGG G+++G P + + GV N+VV+LD G +IA R K++LPNY EF Sbjct: 72 ACEKAVLELAAETADGGPGVIIGTPLKRESGVHNAVVVLDDGKVIAERYKLDLPNYGEFD 131 Query: 125 EKRTFISGYS-NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F + S P+ FR +R+GI ICEDIW ++C+ L + GAE L N SPYY K Sbjct: 132 EKRVFDAAPSMPGPVNFRGVRIGIPICEDIWGKLDVCETLAESGAEILLVPNGSPYYRGK 191 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++ R ++V Q+ LPI+Y N +GGQDEL+FDGASF + LAFQM F E +T Sbjct: 192 VEVRQQVVIVQVIESGLPIVYANMLGGQDELVFDGASFAIQADKSLAFQMSQFEEAVAVT 251 Query: 244 EWHYDQQLSQWNYMSDD----SASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 W + + DD + M I ++EEADY AC+L LRDYV KN F V++GL Sbjct: 252 TWRRGRDAAGAQRGKDDEWVCAEGPMAIIPEKEEADYRACMLGLRDYVNKNGFKNVVLGL 311 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGG+DSALCAA+AVDALG+E V+ +MLPY+YTS +SL DA ACA+ALGC+YD++PI++ V Sbjct: 312 SGGVDSALCAALAVDALGEERVRAVMLPYRYTSKESLRDAEACARALGCRYDIVPINEPV 371 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + + Q + GI EN+QSR RG +LMA+SN +M++TT NKSE+SVGY TLY Sbjct: 372 EGFRNALGQLFEGTEEGITEENLQSRARGTLLMAISNKFGSMVVTTGNKSEMSVGYATLY 431 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGFNP+KDLYK QV+ L WRN+H + LGP EVIP SI++K+PSAELR +QTD Sbjct: 432 GDMNGGFNPIKDLYKMQVYALCRWRNAHVPPTALGPSGEVIPASIIDKAPSAELRENQTD 491 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY +LDDI++ +VENE +D + V +EHLLY +EYKRRQA G KI Sbjct: 492 QDSLPPYAVLDDILECLVENELGVDEIVARGHDRDLVHRIEHLLYVAEYKRRQAAPGVKI 551 Query: 539 TAKSFGRDRLYPISNKFRDH 558 T K+FGRDR YPI+NKFRD Sbjct: 552 TKKNFGRDRRYPITNKFRDR 571 >gi|319407350|emb|CBI80995.1| NH3-dependent NAD synthetase [Bartonella sp. 1-1C] Length = 558 Score = 602 bits (1552), Expect = e-170, Method: Compositional matrix adjust. Identities = 296/554 (53%), Positives = 388/554 (70%), Gaps = 8/554 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +I IAQLNPV+GDI GN A+ A ++A QG DL+L TELFIS YPPEDLV K SF + Sbjct: 10 FRIVIAQLNPVIGDIGGNFTLAKMAYQKAYEQGADLVLLTELFISAYPPEDLVLKSSFTE 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L T +G GI++G P + + N ++ILD G +IA K +LPNY EF Sbjct: 70 ACEDAVRKLAQLTKEG-PGIIIGVPLKRNNNLYNGIMILDDGQVIAECFKYDLPNYCEFD 128 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F SG +PIV+R I LG+LICEDIW + +IC +L +GAE + N SPY+ NK Sbjct: 129 EKRVFASGPRPEPIVYRGITLGVLICEDIWNDPSICANLSHKGAEIILVSNGSPYHRNKT 188 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +KR +IV + +PIIY NQVGGQDEL+FDG SF D Q+AFQMKHF Q +T Sbjct: 189 QKRLDIVRSRAVQSCVPIIYANQVGGQDELVFDGGSFALDEHGQIAFQMKHFESQ--ITL 246 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 H+ ++ W +S L ADY+ACVL L+DYV KN F V++G SGGID Sbjct: 247 SHWQRKSIGWQCISGPDEKL----LDGVAADYHACVLGLKDYVNKNRFKDVLLGFSGGID 302 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SALCAAIAVDALG E V +M+PY YTS +SL+DA CA+ LGC+Y+++PI LV F S Sbjct: 303 SALCAAIAVDALGAERVCAVMMPYYYTSQESLKDAKDCARLLGCRYEIIPIFKLVESFLS 362 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +M+ + + EN+QSRIRG++LMALSN +M++TT NKSE++VGY TLYGDM+G Sbjct: 363 IMAPIFSGLKTDVTEENLQSRIRGSVLMALSNKFDSMVITTGNKSEMAVGYATLYGDMNG 422 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YKTQV++LA WRN + + + LGP VIP +I+ K+PSAELR +Q D++SLP Sbjct: 423 GFNPIKDIYKTQVYKLAEWRNKNYLQNLLGPKRIVIPNNIITKAPSAELRDNQKDEDSLP 482 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYPILDDI++ +VE++ S + + ++ +TV VEHLLY +EYKRRQ+ +G KI+ K+F Sbjct: 483 PYPILDDILQSLVEDDMSVCDILKRGHSRQTVEKVEHLLYLAEYKRRQSALGVKISYKNF 542 Query: 544 GRDRLYPISNKFRD 557 GRDR YPI+N FRD Sbjct: 543 GRDRRYPITNHFRD 556 >gi|319404346|emb|CBI77943.1| NH3-dependent NAD synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 558 Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust. Identities = 293/554 (52%), Positives = 386/554 (69%), Gaps = 8/554 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I IAQLNP++GDI GN + A+ A ++A Q DL+L TELFIS YPPEDLV K SF + Sbjct: 10 LRIVIAQLNPIIGDIKGNFSLAKMAYQKAYEQNADLVLLTELFISAYPPEDLVLKSSFTK 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L T +G GI++G P + + N +++LD G +I R K +LPNY EF Sbjct: 70 ACEDAVRKLAQLTKEG-PGIIIGVPLKRDNSLYNGIMLLDDGQVITERFKCDLPNYCEFD 128 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F SG +PIV+R I LG++ICEDIW + +IC L +GAE + N SPYY NK+ Sbjct: 129 EKRVFSSGPRPEPIVYRGITLGVVICEDIWNDPSICAELSHKGAEIILVSNGSPYYRNKM 188 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +KR EIV Q +PIIY NQVGGQDEL+FDG SF D Q+ FQMKHF Q ++ Sbjct: 189 QKRLEIVRAQAIQSCVPIIYANQVGGQDELVFDGGSFALDEHGQIVFQMKHFESQIALSH 248 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W ++ +W +S + L ADY+ACVL L+DYV KN F V++G SGGID Sbjct: 249 WQ--RKSIRWQCISGPNEEL----LDGIAADYHACVLGLKDYVNKNRFKDVLLGFSGGID 302 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SALCAAIAVDALG E V +M+PY YTS +SL+DA CA LGC+Y+++PI LV F S Sbjct: 303 SALCAAIAVDALGAERVHAVMMPYYYTSQESLKDAKDCAHLLGCRYEIIPIFKLVESFLS 362 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +M+ + + EN+QSR+RG+ILMALSN +M++TT NKSE++VGY TLYGDM+G Sbjct: 363 IMAPIFSGLKADVTEENLQSRVRGSILMALSNKFDSMVITTGNKSEMAVGYATLYGDMNG 422 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YKTQV++LA WRN + + + LGP VIP +I K+PSAELR +Q D++SLP Sbjct: 423 GFNPIKDIYKTQVYKLAEWRNKNYLQNLLGPKGIVIPSNITTKAPSAELRDNQKDEDSLP 482 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE++ S + + ++ +TV VEHLLY +EYKRRQ+ G KI+ K+F Sbjct: 483 PYPVLDDILQFLVEDDMSVCDILKRGHSRQTVEKVEHLLYLAEYKRRQSAPGVKISYKNF 542 Query: 544 GRDRLYPISNKFRD 557 GRDR YPI+N FRD Sbjct: 543 GRDRRYPITNYFRD 556 >gi|163868125|ref|YP_001609329.1| NAD synthetase [Bartonella tribocorum CIP 105476] gi|161017776|emb|CAK01334.1| NH3-dependent NAD synthetase [Bartonella tribocorum CIP 105476] Length = 553 Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust. Identities = 294/558 (52%), Positives = 389/558 (69%), Gaps = 8/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++A+AQLNP+VGDI GN + A A ++A +G DL+LFTELFIS YPPEDLV K Sbjct: 1 MKNNFRVAVAQLNPIVGDIGGNFSLAVMAHQKAKEEGADLVLFTELFISAYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F +AC +++ L T GG GI++G P + + N +++LD G +I K +LPNY Sbjct: 61 AFTKACEESVEKLAKITV-GGPGIIIGLPLRRNGNIYNGLMLLDEGRVITESLKFDLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +EF EKR F G +PI + I+LGI+ICEDIW +S++C L +GAE + LN SPYY Sbjct: 120 AEFDEKRLFSPGPRPEPIDYHGIKLGIVICEDIWNDSSLCAELCNKGAEMILVLNGSPYY 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK KR E+V +PIIY NQVGGQDEL+FDG SF +GQ ++ FQMKHF ++ Sbjct: 180 RNKTLKRIEVVRAHALQFGVPIIYANQVGGQDELVFDGGSFALNGQGKMVFQMKHF--ES 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ H+ ++ + W+Y+S + + L + ADY ACVL L+DYV KN F VI+GLS Sbjct: 238 HISVSHWQRKTTGWHYVSGPNENL----LTDLAADYQACVLGLKDYVNKNGFKDVILGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALCAA+AVDALG E V+TIM+PY YTS +SL+DA CA LGC+Y+++PI V Sbjct: 294 GGIDSALCAAMAVDALGAERVRTIMMPYHYTSQESLKDAKECADLLGCRYEIIPIAQPVE 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + M+ S + EN+QSRIRG +LMALSN +M++TT NKSE++VGY TLYG Sbjct: 354 AFLNTMAPVFLGLSSDVTEENLQSRIRGTLLMALSNKFGSMVVTTGNKSEMAVGYATLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKD+YK QV+ LA WRN + + GP VIP +I++K+PSAELR +Q D+ Sbjct: 414 DMNGGFNPLKDIYKMQVYALADWRNKNYLHHLKGPEGIVIPSNIIKKAPSAELRENQKDE 473 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYPILDDI++ +VEN+ S + Q Y ETV +EHLLY +EYKRRQ+ G KI+ Sbjct: 474 DSLPPYPILDDILQSLVENDMSIGDIVQRGYLRETVEKIEHLLYAAEYKRRQSAPGVKIS 533 Query: 540 AKSFGRDRLYPISNKFRD 557 K+FGRDR YPI N FRD Sbjct: 534 YKNFGRDRRYPIVNHFRD 551 >gi|240850328|ref|YP_002971721.1| NH3-dependent NAD synthetase [Bartonella grahamii as4aup] gi|240267451|gb|ACS51039.1| NH3-dependent NAD synthetase [Bartonella grahamii as4aup] Length = 558 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 295/558 (52%), Positives = 385/558 (68%), Gaps = 8/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +++IAQLNP+VGDI GN + A A ++A +G DL+LFTELFIS YPPEDLV K Sbjct: 6 MKNDFRVSIAQLNPIVGDIEGNFSLAAMAHQKAKEEGADLVLFTELFISAYPPEDLVLKP 65 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + C + L T GG GIV+G P + + N V++LD G +IA K +LPNY Sbjct: 66 AFTKTCEETVKKLAKITV-GGPGIVIGLPLRRNGNIYNGVMLLDEGRVIAESLKFDLPNY 124 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +EF EKR F SG +P+++R + LGI+ICEDIW +S++C L +GAE + LN SPY Sbjct: 125 AEFDEKRLFSSGPRPEPLIYRGVGLGIVICEDIWNDSSLCAELGNKGAEIILVLNGSPYD 184 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK KR ++V Q +PIIY NQVGGQDEL+FDG SF +G+ + FQMKHF Sbjct: 185 RNKTLKRIDVVHTQALRSGVPIIYANQVGGQDELVFDGGSFALNGEGKKIFQMKHFDSHI 244 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ W + + W+ +S + S L ADY ACVL LRDYV KN F VI+GLS Sbjct: 245 ALSHWQ--KITTGWHCISGPNESL----LNGLAADYQACVLGLRDYVNKNRFKDVILGLS 298 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSALCAA+AVDALG E V+TIM+PY YTS +SL+DA CA+ LGC Y+++PI V Sbjct: 299 GGVDSALCAAMAVDALGSERVRTIMMPYHYTSQESLKDAKECAQLLGCHYEIIPIEQPVE 358 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + M+ PS + EN+QSR+RG ILMALSN +M++TT NKSE++VGY TLYG Sbjct: 359 AFLNAMAPVFLGLPSDVTEENLQSRVRGTILMALSNKFGSMVVTTGNKSEMAVGYATLYG 418 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKD+YK QV+ LA WRN + + + GP VIP +I+EK+PSAELR +Q D+ Sbjct: 419 DMNGGFNPLKDIYKMQVYALAEWRNKNHLHNLKGPEGIVIPSNIIEKAPSAELRENQKDE 478 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYPILDDI++ ++EN+ S + + Y+ ETV VE LLYG+EYKRRQ+ G KI+ Sbjct: 479 DSLPPYPILDDILQSLIENDMSICDIIKRGYSRETVEKVEQLLYGAEYKRRQSAPGVKIS 538 Query: 540 AKSFGRDRLYPISNKFRD 557 K+FGRDR YPI N FRD Sbjct: 539 YKNFGRDRRYPIVNHFRD 556 >gi|121601772|ref|YP_988914.1| NAD synthetase [Bartonella bacilliformis KC583] gi|120613949|gb|ABM44550.1| glutamine-dependent NAD(+) synthetase [Bartonella bacilliformis KC583] Length = 560 Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust. Identities = 298/557 (53%), Positives = 387/557 (69%), Gaps = 14/557 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IA+AQLNP+VGDI GN A+ A ++A +QG DL+L TELFIS YPPEDLV K +F + Sbjct: 12 FRIAVAQLNPIVGDIEGNFVLAKMAHQKAQQQGADLVLLTELFISAYPPEDLVLKPAFTK 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +AI L T +G GI++G P + + + N VV+LD G +IA K +LPNY EF Sbjct: 72 ACENAIKKLAKVTKEG-PGIIIGAPIKRGDAIYNGVVLLDNGQVIAEYLKFDLPNYLEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G S +PIV+R I LGI++CEDIW +S+IC + +GAEF+ N SPY HNK+ Sbjct: 131 EKRVFSPGPSPEPIVYRGITLGIVVCEDIWNDSSICTEFRNKGAEFILVSNGSPYCHNKI 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 KR IV + +P+IY NQVGGQDELIFDG SF + Q +AFQMKHF ++ Sbjct: 191 LKRMSIVRARAIQAGVPVIYANQVGGQDELIFDGGSFALNEQGTVAFQMKHFESHIAVSH 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W ++ W +S + L ADY+ACVL LRDYV KN F VI+GLSGGID Sbjct: 251 WQ--RKSIGWQCVSGPNEKL----LGGLAADYHACVLGLRDYVNKNGFKDVILGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SALCAAIA DALG E V+ IM+PY YTS +SL+DA CA L C Y+++PI V +F S Sbjct: 305 SALCAAIATDALGAERVRAIMMPYHYTSEESLKDAKDCAHFLNCHYEIIPIVQPVENFLS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +++ PS + EN+QSR+RG ILMALSN +M++TT NKSE++VGY TLYGDM+G Sbjct: 365 IIAPIFSGLPSDVTEENLQSRVRGTILMALSNKFGSMVITTGNKSEMAVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ LA WRN + + + LG VIPP+I++K+PSAELR +Q D++SLP Sbjct: 425 GFNPIKDIYKMQVYALAEWRNKNHLLNFLGAEGVVIPPNIIKKAPSAELRENQKDEDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 PYPILDDI++ +VEN+ S D+ + ETV VEHLLY +E+KRRQ+ G KI++ Sbjct: 485 PYPILDDILQSLVENDMSV---DEIVKCGHLRETVEKVEHLLYVAEHKRRQSAPGIKISS 541 Query: 541 KSFGRDRLYPISNKFRD 557 K+FGRDR YPI+N FRD Sbjct: 542 KNFGRDRRYPITNYFRD 558 >gi|49474273|ref|YP_032315.1| NAD synthetase [Bartonella quintana str. Toulouse] gi|49239777|emb|CAF26167.1| NH3-dependent NAD synthetase [Bartonella quintana str. Toulouse] Length = 558 Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust. Identities = 292/558 (52%), Positives = 381/558 (68%), Gaps = 8/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++A+AQLNPVVGDI GN + A A ++A +G DL+LFTELFIS YPPEDLV K Sbjct: 6 MKNDFRVAVAQLNPVVGDIEGNFSLAVMAYQKAREEGADLVLFTELFISAYPPEDLVLKP 65 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +FI+ C A+ L T GG GIV+G P + + + N V++LD G II+ K +LPNY Sbjct: 66 AFIKTCEGAVKELAKLT-TGGPGIVIGLPLRYNDKIFNGVMLLDEGRIISESLKFDLPNY 124 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +EF E+R F SG +PIV+ IRLGI+ICEDIW + + C L+ +GAE + LN SPY+ Sbjct: 125 AEFDERRLFSSGPRPEPIVYHGIRLGIVICEDIWNDFSFCAELRNKGAEIILVLNGSPYH 184 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK KR E+V Q LPIIY NQVGGQDEL+FDG SF +GQ ++ FQMKHF Sbjct: 185 RNKTLKRIEVVRAQALQSGLPIIYANQVGGQDELVFDGGSFALNGQGKMVFQMKHFESHI 244 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ W ++++ W +S + + ADY ACVL L DYV KN F VI+GLS Sbjct: 245 ALSHWQ--KKMTGWQCISGPNENL----FNGLAADYQACVLGLGDYVNKNGFKDVILGLS 298 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALC A+AVDALG + V+T+M+PY YTS +SL+DA CA LGC Y ++PI V Sbjct: 299 GGIDSALCTAMAVDALGAKRVRTVMMPYHYTSQESLKDAKECAHLLGCDYQIIPIIKPVE 358 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S ++ + EN+QSR+RG +LMALSN +M++TT NKSE++VGY TLYG Sbjct: 359 VFLSTLAPVFLGLTPDVTEENLQSRVRGTLLMALSNKFGSMVVTTGNKSEMAVGYATLYG 418 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKD+YKTQV+ LA WRN + + + G VIPP+I+ K+PSAEL +Q D+ Sbjct: 419 DMNGGFNPLKDIYKTQVYALAEWRNKNHLQNWEGSEGVVIPPNIIAKAPSAELSENQKDE 478 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYPILDDI++ ++EN+ S + + Y ETV +EHLLY +EYKRRQ+ G KI+ Sbjct: 479 DSLPPYPILDDILQSLIENDMSVCDIVKRGYLRETVEKIEHLLYVAEYKRRQSAPGVKIS 538 Query: 540 AKSFGRDRLYPISNKFRD 557 K+FGRDR YPI N FRD Sbjct: 539 YKNFGRDRRYPIVNHFRD 556 >gi|319408420|emb|CBI82075.1| NH3-dependent NAD synthetase [Bartonella schoenbuchensis R1] Length = 558 Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust. Identities = 297/554 (53%), Positives = 382/554 (68%), Gaps = 8/554 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IA+AQLNPV+GDI GN A A A ++A QG DL+L TELFIS YPPEDLV K +FI+ Sbjct: 10 FRIAVAQLNPVIGDIEGNFALAIMAHQKAQEQGADLVLLTELFISAYPPEDLVLKPAFIK 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A+ L T +G GIV+G P + + + N V++L+ G I+A R K +LPNY+EF Sbjct: 70 ACENAVQRLAKVTKNG-PGIVIGVPLRRDDAIYNGVMLLNDGQIVAERLKFDLPNYAEFD 128 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F S +PIV+R I LGI+ICEDIW +S+IC L +GAE + N SPY +K Sbjct: 129 EKRVFSSDPFLEPIVYRGITLGIVICEDIWSDSSICAQLSNKGAEIILVPNGSPYTRHKT 188 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 KR +IV Q +PIIY NQVGGQDEL+FDG SF +GQ ++AFQMKHF ++ Sbjct: 189 LKRLDIVRAQAIQSGVPIIYANQVGGQDELVFDGGSFALNGQGKMAFQMKHFESHIALSH 248 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W +Q W +S + L ADY ACVL LRDYV KN F VI+GLSGGID Sbjct: 249 WQ--RQSIGWQCISGPNEEL----LSGLAADYQACVLGLRDYVNKNCFQDVILGLSGGID 302 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SALCA +AVDALG E V+T+M+PY YTS +SL DA CA+ LGC Y+V+PI V F + Sbjct: 303 SALCATMAVDALGAERVRTVMMPYHYTSQESLRDAEDCARFLGCHYEVIPIIQPVEGFLN 362 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + + EN+QSR RG ILMALSN +M++TT NKSE++VGY TLYGDM+G Sbjct: 363 ALAPAFSQLKPDLTEENLQSRTRGTILMALSNKFGSMVITTGNKSEMAVGYATLYGDMNG 422 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ LA WRN + + + LG VIP +I+ K+PSAELR +Q D++SLP Sbjct: 423 GFNPIKDIYKMQVYALAKWRNKNHLQNLLGAKGVVIPSNIIMKAPSAELRENQKDEDSLP 482 Query: 485 PYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYPILDDI++ +VE++ S Q + ETV +EHLLY +EYKRRQ+ G KI++KSF Sbjct: 483 PYPILDDILQSLVEDDMSVGEIVQCGHLRETVEKIEHLLYLAEYKRRQSAPGVKISSKSF 542 Query: 544 GRDRLYPISNKFRD 557 GRDR YPI N+FRD Sbjct: 543 GRDRRYPIINRFRD 556 >gi|304391830|ref|ZP_07373772.1| NAD(+) synthase (glutamine-hydrolyzing) [Ahrensia sp. R2A130] gi|303296059|gb|EFL90417.1| NAD(+) synthase (glutamine-hydrolyzing) [Ahrensia sp. R2A130] Length = 556 Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust. Identities = 283/556 (50%), Positives = 380/556 (68%), Gaps = 9/556 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IAIAQ+NP VGD++GN R AR +A RQG DL++FTELFISGY PEDLV K +FI+ Sbjct: 8 LRIAIAQMNPTVGDVSGNTDLVREARSDAARQGADLVVFTELFISGYSPEDLVLKPAFIK 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A++ L +T DGG ++VG P Q + G+ NSV +LD G I +R K++LPNY F Sbjct: 68 RCREAVEALAEETKDGGPAVLVGVPWQAETGLHNSVALLDGG-AIKLRHKVDLPNYGVFD 126 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLG+ ICEDIW + ++C+ L + G+E L N SPYY K+ Sbjct: 127 EKRVFAQGPMPGPLNFRGVRLGVPICEDIWGDLDVCETLAESGSEILIVPNGSPYYRQKV 186 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R+++V Q+ LP+++ NQ+GGQDEL+FDG SF + + + QM F +T Sbjct: 187 DVRYQVVMRQVIVTELPMLFANQLGGQDELVFDGGSFVMNADKSIPVQMNQFESSVALTT 246 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + D T +QE D+ ACVL LRDYV+KN F V++GLSGGID Sbjct: 247 WRRGSD----GWACDRGVQTRLPDVQE--CDWRACVLGLRDYVEKNGFKNVVLGLSGGID 300 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+ AA++VDALG+E V+ +MLPY+YTS +SL+DA CA ALG +Y+ +PI V F Sbjct: 301 SAIVAAMSVDALGEERVRCVMLPYRYTSDESLKDAQDCANALGVRYETIPIEPPVQGFLD 360 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S ++ G+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 361 TLSDVFEDTAEGVTEENLQSRARGVILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 420 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ L+ WRN H LGP EVIP +I++K+P+AELR +QTDQ+SLP Sbjct: 421 GFNPIKDLYKMQVYGLSDWRNKHMPPDCLGPSGEVIPQNIIDKAPTAELRENQTDQDSLP 480 Query: 485 PYPILDDIIKRIVENEESFINNDQEYNDE--TVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 YP+LD I++ +VENE S + +++ E TV +EHLLY +EYKRRQA G KIT ++ Sbjct: 481 EYPVLDAILESLVENEMSVDDIVEKFGFERATVERMEHLLYIAEYKRRQAAPGVKITRRA 540 Query: 543 FGRDRLYPISNKFRDH 558 FGR+R YPI+N+FRD Sbjct: 541 FGRERRYPITNRFRDR 556 >gi|306840502|ref|ZP_07473261.1| NAD+ synthetase [Brucella sp. BO2] gi|306289517|gb|EFM60735.1| NAD+ synthetase [Brucella sp. BO2] Length = 518 Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust. Identities = 283/521 (54%), Positives = 363/521 (69%), Gaps = 7/521 (1%) Query: 39 DLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN 98 DLILFTELFISGYPPED+V K +F+ AC A+ L +DT DGG G+++G P G N Sbjct: 4 DLILFTELFISGYPPEDMVLKPAFVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHN 63 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 +V +LD G IIA R K++LPNY EF EKR F G P+ FR +RLGI +CEDIW Sbjct: 64 AVAVLDGGEIIAERFKVDLPNYGEFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELG 123 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + + L + GAE L N SPY+ K+ +RH++V Q+ LPI+Y NQVGGQDEL+FDG Sbjct: 124 VAETLAESGAEILLVPNGSPYHRAKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFDG 183 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA 278 SF F+ + L QM F+EQ +TEW D W + AS +P + ADY A Sbjct: 184 GSFVFNADKSLCLQMPQFAEQIALTEWQRDG--DGWRCGDGEKAS---LP-EGLAADYAA 237 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 C+L LRDYV KN F V++GLSGGIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL D Sbjct: 238 CMLGLRDYVNKNGFKDVVLGLSGGIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLAD 297 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 AA CA+ALG +YD++PI + V F + + SG+ EN+QSR RG ILMA+SN Sbjct: 298 AADCARALGVRYDIVPIAEPVEGFMNALQPLFSGTDSGVTEENLQSRARGTILMAISNKF 357 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +M++TT NKSE+SVGY TLYGDM+GGFNP+KD+YK QV+ L+ WRN H LGP E Sbjct: 358 GSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDVYKMQVYALSQWRNHHLPQGALGPAGE 417 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRY 517 VIP +I+ K+PSAELR +QTDQ+SLPPYP+LDDI++ +VENE S + + ETV+ Sbjct: 418 VIPQNIISKAPSAELRENQTDQDSLPPYPVLDDILECLVENEMSNAEIVARGHALETVQR 477 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 +EHLLY +EYKRRQ+ G KIT K+FGRDR YPI+N+FRD Sbjct: 478 IEHLLYLAEYKRRQSAPGVKITKKNFGRDRRYPITNRFRDR 518 >gi|319405818|emb|CBI79448.1| NH3-dependent NAD synthetase [Bartonella sp. AR 15-3] Length = 558 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 287/554 (51%), Positives = 384/554 (69%), Gaps = 8/554 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I IAQLNP++GDI GN+A A ++A Q DL+L TELFIS YPPEDLV K +F + Sbjct: 10 LRIVIAQLNPIIGDIEGNLALAEMTYQKAYEQDADLVLLTELFISAYPPEDLVLKYAFTK 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L T +G GI++G P + + N +++LD G +IA R K +LPNY EF Sbjct: 70 ACEDAVKKLAQLTKEG-PGIIIGIPLKRDNDLYNGIMLLDDGQVIAERFKCDLPNYCEFD 128 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G +P+V+R + LG++ICEDIW + +IC L +GAE + N SPY NK Sbjct: 129 EKRVFSPGPRPEPVVYRGMTLGVVICEDIWNDPSICAELSHKGAEIILVPNGSPYQRNKT 188 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +KR +IV Q ++PIIY NQVGGQDEL+FDG SF D Q+ FQMKHF +N ++ Sbjct: 189 QKRLDIVRAQAVQSYVPIIYANQVGGQDELVFDGGSFAVDEHGQIVFQMKHF--ENHISL 246 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 H+ ++ W +S + L ADY+ACVL L+DYV KN F V++G SGGID Sbjct: 247 SHWQRKSIGWQCISGPNEEL----LDGIAADYHACVLGLKDYVNKNRFKDVLLGFSGGID 302 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SALCAAIAVDALG E V+ +M+PY YTS +SL+DA CA LGC+Y+V+PI V F S Sbjct: 303 SALCAAIAVDALGAERVRAVMMPYCYTSQESLKDAKHCAHLLGCRYEVIPIFKPVESFLS 362 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +M+ + + EN+QSRIRG++LMALSN +M++TT NKSE++VGY TLYGDM+G Sbjct: 363 IMAPIFAGLQTDVTEENLQSRIRGSVLMALSNKFDSMVITTGNKSEMAVGYATLYGDMNG 422 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV++LA WRN + + + LGP +IP +I+EK+PSAELR +Q D++ LP Sbjct: 423 GFNPIKDIYKMQVYKLAEWRNKNYLQNLLGPKGIIIPSNIIEKAPSAELRENQKDEDFLP 482 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYPILDDI++ +VE++ S + + + +TV VEHLLY +EYKRRQ+ G KI+ K+F Sbjct: 483 PYPILDDILQSLVEDDMSVCDIVKRGHLRQTVEKVEHLLYLAEYKRRQSAPGVKISYKNF 542 Query: 544 GRDRLYPISNKFRD 557 GRDR YPI+N FRD Sbjct: 543 GRDRRYPITNHFRD 556 >gi|319899020|ref|YP_004159113.1| NH3-dependent NAD synthetase [Bartonella clarridgeiae 73] gi|319402984|emb|CBI76537.1| NH3-dependent NAD synthetase [Bartonella clarridgeiae 73] Length = 558 Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust. Identities = 287/554 (51%), Positives = 379/554 (68%), Gaps = 8/554 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I IAQLNP++GDI GN A ++A QG DLIL TELFIS YPPEDLV K +F + Sbjct: 10 LRIVIAQLNPIIGDIEGNFTLAEITYQKACEQGADLILLTELFISAYPPEDLVLKSAFTK 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L T +G GI++G P + + N +++L+ G +IA R K +LPNY EF Sbjct: 70 ACEDAVKKLAQLTKEG-PGIIIGVPLKRDNSIYNGIMLLNDGQVIAERFKCDLPNYCEFD 128 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G +PIV+R + LG++ICEDIW + +IC L +GAE + N SPY+ NK Sbjct: 129 EKRVFSPGPRPEPIVYRGMTLGVVICEDIWNDPSICAELSHKGAEIILVPNGSPYHRNKT 188 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +KR +IV Q +PIIY NQVGGQDEL+FDG SF D Q Q+AFQMKHF ++ Sbjct: 189 QKRLDIVRAQAVQSCVPIIYANQVGGQDELVFDGGSFALDEQGQIAFQMKHFESHIALSH 248 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W ++ W +S + L ADY ACVL L+DYV KN F VI+G SGGID Sbjct: 249 WR--RKSIGWQCISGPNEEL----LDGLAADYYACVLGLKDYVNKNRFKDVILGFSGGID 302 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SALCAAIAVDALG E V +M+PY YTS +SL+DA CA LGC+Y+++PI V F S Sbjct: 303 SALCAAIAVDALGAERVCAVMMPYYYTSQESLKDAKDCAHLLGCRYEMIPILKPVESFLS 362 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +M+ + + EN+QSRIRG++LM LSN +M++TT NKSE++VGY TLYGDM+G Sbjct: 363 VMAPIFSGLQTDVTEENLQSRIRGSVLMTLSNKFGSMVITTGNKSEMAVGYATLYGDMNG 422 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV++LA WRN + + + LGP +IP +I+EK PSAELR +Q D++ LP Sbjct: 423 GFNPIKDIYKMQVYKLAEWRNKNHLQNLLGPKGIIIPSNIIEKEPSAELRENQKDEDFLP 482 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYPILDDI++ ++E++ S + + ++ +TV VEHLLY +EYKRRQ+ G KI+ K+F Sbjct: 483 PYPILDDILQSLIEDDMSVSDIVKRGHSRQTVEKVEHLLYLAEYKRRQSAPGVKISYKNF 542 Query: 544 GRDRLYPISNKFRD 557 GRDR YPI+N FRD Sbjct: 543 GRDRRYPITNHFRD 556 >gi|118588086|ref|ZP_01545496.1| NAD synthetase [Stappia aggregata IAM 12614] gi|118439708|gb|EAV46339.1| NAD synthetase [Stappia aggregata IAM 12614] Length = 555 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 283/557 (50%), Positives = 385/557 (69%), Gaps = 9/557 (1%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + ++A+AQLNP VGD+AGN R+AR +A QG DL+L +EL ++GY PEDLV K +F+ Sbjct: 5 RFRLAVAQLNPTVGDVAGNADLVRKARLDAASQGADLVLTSELVLAGYLPEDLVLKPAFV 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSE 122 + C A +TL +T DGG G+++G P + +EG V N+ ++LD G I AVR K +LPNYS Sbjct: 65 RRCMEAAETLAGETADGGPGLILGSPWRSEEGKVYNAALLLDQGEIKAVRYKYDLPNYSV 124 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F +G P+ FR +R+G+ ICEDIW N +C+ L++ GAE L N SPY+ + Sbjct: 125 FDEKRVFAAGPLPGPVDFRGVRIGLPICEDIW-NDEVCECLEETGAELLLVPNGSPYWEH 183 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 + + R ++V ++ LP++Y NQ+GGQDEL+FDG SF + LAFQM F + Sbjct: 184 RAEHRLQVVVSRVVQTGLPLVYCNQLGGQDELVFDGGSFALHADRSLAFQMPQFETALGI 243 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++W D W ++ S +P +EA++ ACV+ L DYV KN F V++GLSGG Sbjct: 244 SDWKRDGD--TWLC---ENGSVAKLP-DLDEANWRACVMGLGDYVTKNGFPGVVLGLSGG 297 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+CAA+AVDALG + V IMLPY+YTS +S+ DAAACAKALG +YD +PI + V F Sbjct: 298 IDSAICAAMAVDALGADKVHAIMLPYRYTSEESITDAAACAKALGIRYDTVPISEPVEGF 357 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S +S EN+QSR RG ILMA+SN M++TT NKSE+SVGY TLYGDM Sbjct: 358 RSALSNLFAGTKEDTTEENLQSRARGVILMAVSNKFGHMVMTTGNKSEMSVGYATLYGDM 417 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GG+NP+KDLYKTQV+ LA WRN++ LGP EVIP +I+ K P+AELR +QTDQ+S Sbjct: 418 NGGYNPIKDLYKTQVYHLAEWRNNNRPEGLLGPGREVIPSNIITKVPTAELRENQTDQDS 477 Query: 483 LPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LDDI++ +VE+E S + ++ +D + +EHLLY +EYKRRQAP G KIT + Sbjct: 478 LPPYDVLDDILECLVEDEMSVGDIEKRGHDRALIHRIEHLLYIAEYKRRQAPPGVKITER 537 Query: 542 SFGRDRLYPISNKFRDH 558 +FG+DR YPI+N+FRD Sbjct: 538 NFGKDRRYPITNRFRDR 554 >gi|307946670|ref|ZP_07662005.1| NAD(+) synthase (glutamine-hydrolyzing) [Roseibium sp. TrichSKD4] gi|307770334|gb|EFO29560.1| NAD(+) synthase (glutamine-hydrolyzing) [Roseibium sp. TrichSKD4] Length = 555 Score = 575 bits (1482), Expect = e-162, Method: Compositional matrix adjust. Identities = 283/556 (50%), Positives = 379/556 (68%), Gaps = 7/556 (1%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +++IA+AQLNP VGD+ GN K R+AR+EA + G DL+L EL +SGYPPEDLV K +F+ Sbjct: 5 RIRIAVAQLNPTVGDLTGNADKVRKARDEAAQLGADLVLCPELTLSGYPPEDLVLKPAFV 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 Q C + L S+T G G+++G P + + N+V ++D G I ++R K +LPNYS F Sbjct: 65 QRCMDLVSELASETKGEGPGLLIGSPWAEDGQLYNAVALVDDGEIKSIRYKYDLPNYSVF 124 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F +G P+ FR +RLG+ ICEDIW N +C+ L + GAE L N SPY+HN+ Sbjct: 125 DEKRVFAAGPLPGPMDFRGVRLGVPICEDIW-NDEVCECLAETGAELLLVPNGSPYWHNR 183 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++R ++V ++ LP+IY NQ+GGQDEL+FDG SF + LAFQM F+ +T Sbjct: 184 AEERLQVVVSRVVESDLPLIYCNQIGGQDELVFDGGSFGLQANRTLAFQMSQFTSDLAVT 243 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 EW + W S A+ + + A++ ACV LRDYV KN F V++GLSGGI Sbjct: 244 EWVKGED-EIWVCESGPKAALPDL----DTANWQACVRGLRDYVTKNGFPGVVLGLSGGI 298 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSA+CAA+AVDALG + V IMLPY+YTS +S++DAA CA ALG +YD +PI + V F Sbjct: 299 DSAICAAMAVDALGADKVHAIMLPYRYTSEESIKDAAECAAALGIRYDTVPIEEPVLGFT 358 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 +++S S EN+QSR RG ILMA+SN M++TT NKSE+SVGY TLYGDM+ Sbjct: 359 NVLSDLFAGTKSDTTEENLQSRARGVILMAVSNKFGHMVVTTGNKSEMSVGYATLYGDMN 418 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GG+NP+KDLYKTQV+ LA WRN + LGP EVIP +I+ K P+AELR +QTDQ+SL Sbjct: 419 GGYNPIKDLYKTQVYHLADWRNHNRPDGMLGPEGEVIPTNIITKVPTAELRENQTDQDSL 478 Query: 484 PPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LDDI+ +VE E S + +D+ + VEHLLY +EYKRRQAP G KIT+++ Sbjct: 479 PPYDVLDDILNCLVEEEMSVNEIEARGHDKALIHKVEHLLYIAEYKRRQAPPGVKITSRN 538 Query: 543 FGRDRLYPISNKFRDH 558 FG+DR YPI+N+FRD Sbjct: 539 FGKDRRYPITNRFRDR 554 >gi|254473458|ref|ZP_05086855.1| glutamine-dependent NAD(+) synthetase [Pseudovibrio sp. JE062] gi|211957574|gb|EEA92777.1| glutamine-dependent NAD(+) synthetase [Pseudovibrio sp. JE062] Length = 555 Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust. Identities = 287/560 (51%), Positives = 387/560 (69%), Gaps = 8/560 (1%) Query: 1 MLK-KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M+K + ++A+ Q NP VGDI+GN K R R+ A QG DL+L++ELF++GYP EDLV K Sbjct: 1 MIKDQFRLAVVQANPCVGDISGNAEKVRHHRKLAAEQGADLVLYSELFLAGYPLEDLVRK 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 SF+ AC ++ L +T DGG G++VG P + E + N+V +LD G + +R K++LPN Sbjct: 61 PSFVAACKRELEALAKETADGGPGLLVGLPWAEGEKLYNAVALLDNGKVEGLRFKVDLPN 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F EKR F +G + PI FR +RLG+ ICED W + +C+ L++ GAE L NASPY Sbjct: 121 YGVFDEKRVFDAGPNPGPISFRGVRLGVPICEDTWTDE-VCECLEETGAEILVVPNASPY 179 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K ++R +++ ++ LP +Y NQVGGQDEL+FDGASF + + LA Q+ F+E+ Sbjct: 180 NREKTEERMQLMISRVVETGLPFVYCNQVGGQDELVFDGASFALNHDRSLAMQLGQFTEE 239 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + D + N++ + A + +P +EAD+ ACVL L+DYV KN F V++GL Sbjct: 240 TGYLNFKKD---ADENWLIE-PARVVPMP-DTQEADWLACVLGLKDYVNKNGFPGVVLGL 294 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+CAA+AVDALG E V IMLPY+YTS +S++DA ACA ALG KYD +PI + V Sbjct: 295 SGGIDSAICAAMAVDALGAERVHCIMLPYRYTSEESIKDAKACADALGVKYDTIPIAEPV 354 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F +S SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLY Sbjct: 355 EGFQKTLSGVFAGTESGITEENLQSRSRGVILMAVSNKFGAMVVTTGNKSEMSVGYATLY 414 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGFNP+KDLYKT+V++L+ WRN H +GP EVIP +I+ K+P+AELR +QTD Sbjct: 415 GDMNGGFNPIKDLYKTEVYRLSDWRNKHHPAGVMGPAGEVIPNNIIVKAPTAELRENQTD 474 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y +LDDI+ +VE E S ++ ++ ET+ VEHLLY +EYKRRQA G KI Sbjct: 475 QDSLPEYDVLDDILHCLVEQELSLDEIEKRGHSVETIHRVEHLLYIAEYKRRQAAPGVKI 534 Query: 539 TAKSFGRDRLYPISNKFRDH 558 T K+FGRDR YPI+N+FRD Sbjct: 535 TLKNFGRDRRYPITNRFRDR 554 >gi|254503440|ref|ZP_05115591.1| NAD synthase family [Labrenzia alexandrii DFL-11] gi|222439511|gb|EEE46190.1| NAD synthase family [Labrenzia alexandrii DFL-11] Length = 555 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/559 (49%), Positives = 381/559 (68%), Gaps = 9/559 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++A+AQLNP VGD+AGN R+AR +A Q DL+L +EL ++GYPPEDLV K + Sbjct: 3 INSFRLAVAQLNPTVGDVAGNAELVRQARADAKAQQSDLVLTSELMLAGYPPEDLVLKPA 62 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNY 120 F++ C L +T DGG +++G P G L N+V+++D G + AVR K +LPNY Sbjct: 63 FVRECMETARALAEETGDGGPAVILGTPWYSDAGDLHNAVLLIDQGEVKAVRYKSDLPNY 122 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G P+ FR +R+G+ ICEDIW N +C+ L++ GAE L N SPY+ Sbjct: 123 GVFDEKRVFKAGPLPGPVDFRGVRIGLPICEDIW-NDEVCECLEETGAEILLVPNGSPYW 181 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 N+ ++R ++V ++ LP++Y NQ+GGQDEL+FDG SF + LAFQM F Sbjct: 182 ENRAEERLQVVVARVVQTDLPLVYCNQLGGQDELVFDGGSFALQADRSLAFQMPQFETAL 241 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++W D + W S S +P +EA++ ACVL L DYV KN F V++GLS Sbjct: 242 GISDWKRDGE--AWTCTS---GSVAKLP-DLDEANWRACVLGLGDYVTKNGFPGVVLGLS 295 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+CAA+AVDALG + V +IMLP++YTS +S++DAA CAKALG +YD +PI + V Sbjct: 296 GGIDSAVCAAMAVDALGADKVHSIMLPFRYTSEESIKDAADCAKALGLRYDTVPIAEPVE 355 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + +G+ EN+QSR RG ILMA+SN M++TT NKSE+SVGY TLYG Sbjct: 356 GFTKALDGLFAGTEAGVTEENLQSRTRGVILMAVSNKFGHMVMTTGNKSEMSVGYATLYG 415 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKTQV+ L++WRN++ LGP EVIP +I+ K P+AELR +QTDQ Sbjct: 416 DMNGGYNPIKDLYKTQVYHLSAWRNANKPAGLLGPDGEVIPSNIITKVPTAELRENQTDQ 475 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LDDI++ +VE E S + ++ ++ + + +EHLLY +EYKRRQAP G KIT Sbjct: 476 DSLPAYDVLDDILECLVEKEMSVGDIEKRGHSRDLIHRIEHLLYIAEYKRRQAPPGVKIT 535 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++FGRDR YPI+N+FRD Sbjct: 536 ERNFGRDRRYPITNRFRDR 554 >gi|217976322|ref|YP_002360469.1| NAD synthetase [Methylocella silvestris BL2] gi|217501698|gb|ACK49107.1| NAD+ synthetase [Methylocella silvestris BL2] Length = 576 Score = 568 bits (1464), Expect = e-160, Method: Compositional matrix adjust. Identities = 286/559 (51%), Positives = 368/559 (65%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L I +AQ++ VGDIAGN+A+ R AR EA G D+++F+ELFI+GYPPEDLV K Sbjct: 1 MTDTLVIGLAQIDSTVGDIAGNVARVRAARTEAAGFGADVVMFSELFIAGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++AC +A+D L DT DGG I+VG P + N+ +LD G + AVR K++LPNY Sbjct: 61 AFLEACRAALDDLARDTADGGPAILVGVPLVENGLAYNAYALLDGGRVEAVRYKVDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G P+ R +R+G+ ICEDIW + + + + G E L N SPY+ Sbjct: 121 GVFDEKRVFAPGPMPGPLTLRGVRIGVPICEDIWGPDPV-ECIAETGGEILLVPNGSPYW 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R IV ++ LP+IY+NQVGGQDEL+FDGASF + + LAFQ+ F+ Sbjct: 180 RGKADERLAIVAARVVESGLPLIYLNQVGGQDELVFDGASFGLNADRTLAFQLPAFTSVV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 T W + + + A+ Q EEADY+ACV+ LRDYV+KN F V++GLS Sbjct: 240 ARTVWRRGD--NGFVCVEGPKAAIE----QGEEADYSACVVGLRDYVEKNGFPGVVLGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALCAA+AVDALG V +MLPY+YTS +SL DA CAKALG +YD+LPI +V+ Sbjct: 294 GGIDSALCAAMAVDALGAARVHCVMLPYRYTSNESLFDAEGCAKALGVRYDILPIEPIVS 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + P G+ ENIQSR+RG LMA+SN AML+TT NKSE+SVGY T+YG Sbjct: 354 GFETTLRPLFAGTPPGLTEENIQSRVRGATLMAISNKFGAMLVTTGNKSELSVGYATIYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKDLYK +VF+L RN LGP VIP +IL K PSAELR +Q DQ Sbjct: 414 DMNGGFNPLKDLYKMEVFRLCRLRNRWKPKGALGPDGVVIPENILVKPPSAELRENQKDQ 473 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD I++ +VE E + + ETV+ VE LLY +EYKRRQ+ G K+T Sbjct: 474 DSLPPYEELDAILEGLVEKEMRVSDLIAAGFTAETVKKVERLLYLAEYKRRQSAPGVKVT 533 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+FGRDR YPI NKFRD Sbjct: 534 KKNFGRDRRYPILNKFRDS 552 >gi|328544366|ref|YP_004304475.1| NAD synthase family [polymorphum gilvum SL003B-26A1] gi|326414108|gb|ADZ71171.1| NAD synthase family [Polymorphum gilvum SL003B-26A1] Length = 562 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 280/556 (50%), Positives = 377/556 (67%), Gaps = 7/556 (1%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + ++A+AQLNPVVGD+AGN R+AR A +G L+L +EL ++GYPPEDLV K +F+ Sbjct: 12 RFRLAVAQLNPVVGDVAGNAELVRQARARAAAEGAHLVLCSELVLAGYPPEDLVLKPAFL 71 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +AC +A + L +T DGG ++VG P D + N+V++LDAG I AVR K++LPNY F Sbjct: 72 RACRAAAEDLARETADGGPALIVGTPWIDDGKLHNAVLLLDAGRIQAVRYKVDLPNYGVF 131 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F G P+ FR +RLG+ ICED W + +C+ L + GAE L N SPY+ NK Sbjct: 132 DEKRVFAPGPMPGPVDFRGVRLGLPICEDAWTD-EVCECLAETGAEILLVPNGSPYWANK 190 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++R +++ ++ LP++Y NQ+GGQDEL+FDG SF ++LAFQM F +T Sbjct: 191 AEERLQVMVARVVESGLPLVYCNQLGGQDELVFDGGSFALQADRRLAFQMPQFRTDLAVT 250 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +W D +W A I +EA++ ACV+ LRDYV K+ F VI+GLSGGI Sbjct: 251 DWQRDAD-GKWVCAGGPLARLPEI----DEANWLACVVGLRDYVDKSRFPGVILGLSGGI 305 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSA+CAA+AVDALG E V +M+PY+YTS S+ DA ACA+ L +YD +PI V F Sbjct: 306 DSAVCAAMAVDALGPERVHGVMMPYRYTSRASIVDAEACARKLAIRYDTVPIEIPVAGFT 365 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 ++ P+ EN+QSR RG +LMA+SN M++TT NKSE+SVGY TLYGDM+ Sbjct: 366 EVLGPLFHGRPADTTEENLQSRSRGVVLMAISNKFGYMVVTTGNKSEMSVGYATLYGDMN 425 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GG+NP+KDLYKTQV+QLA+WRN++ LGP EVIP +I+ K PSAELR +QTDQ+SL Sbjct: 426 GGYNPVKDLYKTQVYQLAAWRNANRPEGVLGPAGEVIPHNIIAKVPSAELRENQTDQDSL 485 Query: 484 PPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 P Y +LDDI+ +VENE + + +D T+ VE+LLY +EYKRRQAP G KIT ++ Sbjct: 486 PSYDVLDDILACLVENEMAVSEIEARGHDRATIHRVENLLYVAEYKRRQAPPGVKITRRN 545 Query: 543 FGRDRLYPISNKFRDH 558 FGRDR YPI+N+FRD Sbjct: 546 FGRDRRYPITNRFRDR 561 >gi|92117038|ref|YP_576767.1| NAD synthetase [Nitrobacter hamburgensis X14] gi|91799932|gb|ABE62307.1| NH(3)-dependent NAD(+) synthetase [Nitrobacter hamburgensis X14] Length = 583 Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust. Identities = 275/560 (49%), Positives = 369/560 (65%), Gaps = 13/560 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 KI + QLNP VGDIAGN AKAR AR +A G L+ ELFI+GYPPEDLV K +F Sbjct: 6 FKITLGQLNPTVGDIAGNAAKARVARAQAKADGAALVALPELFIAGYPPEDLVLKPAFQA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++TL +T DGG +++G P D + N+ +LD G + A+R K+NLPNY F Sbjct: 66 ACREAVETLARETSDGGPAVLIGTPWVDDGKLYNAYALLDGGRVAAIRFKVNLPNYGVFD 125 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASPY 179 EKR F G P+ R +R+G+ ICED W + N+ + L + GAE L N SPY Sbjct: 126 EKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESAEYENVVECLAETGAEILLVPNGSPY 185 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R I +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 186 AKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLPAFRES 245 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 +W + + W A + + ++ADY ACVL LRDYV KN F V++G+ Sbjct: 246 LVTLQWT--KSAAGWR-----CAGPVAPQIDGDKADYAACVLGLRDYVHKNGFPGVLLGV 298 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSALCAAIAVDALG E V+ +MLP+++T+ SL+DAA AKALG +Y+VLPI V Sbjct: 299 SGGIDSALCAAIAVDALGAERVRGVMLPFRFTAQVSLDDAATLAKALGIRYEVLPIAPAV 358 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F ++S P I EN+Q+R RG +LMA+SN AM++TT NKSE+SVGY TLY Sbjct: 359 NGFEEVLSGTFAGLPRDITEENLQARARGTLLMAISNKLGAMVVTTGNKSEMSVGYATLY 418 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGFNP+KD+YKT+VF+L++ RN+ LGP EVIP +I+ + P+AELR +QTD Sbjct: 419 GDMNGGFNPIKDIYKTEVFRLSNLRNAWKPDGALGPSGEVIPVNIITRPPTAELRENQTD 478 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY +LD I++R++E EE + E ++ + V ++ LL +EYKRRQA G K+ Sbjct: 479 QDSLPPYDVLDAILERLIEREEPLASIVAEGFDRDMVARIDRLLNVAEYKRRQAAPGVKV 538 Query: 539 TAKSFGRDRLYPISNKFRDH 558 T ++FGRDR YPI+N+FRD Sbjct: 539 TRRNFGRDRRYPITNRFRDS 558 >gi|154251557|ref|YP_001412381.1| NAD+ synthetase [Parvibaculum lavamentivorans DS-1] gi|154155507|gb|ABS62724.1| NAD+ synthetase [Parvibaculum lavamentivorans DS-1] Length = 554 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 283/561 (50%), Positives = 372/561 (66%), Gaps = 12/561 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL+IA+AQLNPVVGDIAGN+ KA AR A+ G +LI+FTELF++GYPPEDLV K Sbjct: 1 MTDKLRIALAQLNPVVGDIAGNLQKAVEARRAASVAGAELIVFTELFLTGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + +A++ L T DGG +++G P ++ + N+V+ LD G I R K++LPNY Sbjct: 61 AFQRVAKAAVEDLARQTADGGPAVLIGAPWAEEGKLYNAVLHLDRGEIKGRRYKVHLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F E R F SG P R +R+G ICEDIW ++ + L++ GAE L N SPY Sbjct: 121 SVFDEPRVFASGPMPGPFSIRGVRIGAPICEDIW-YPDVVECLEESGAELLLVPNGSPYE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R ++ +I LP+ YVNQ+GGQDEL+FDG SF + LA QM + E+ Sbjct: 180 FNKPDARLQLALSRIRESGLPLAYVNQLGGQDELVFDGGSFVLNADFSLALQMPAWEEKI 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIG 298 T+W ++ W + A L EE E+ Y A V LRDYV+KN F V++G Sbjct: 240 TCTDWTRGEK--GWVCAPGEKA------LVEEGDESLYLAVVQGLRDYVKKNRFPGVVLG 291 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AAIAVDALG + V +MLPY+YTS +SL DA ACAK LG +YDV+PI + Sbjct: 292 LSGGIDSALVAAIAVDALGADKVHCVMLPYRYTSSESLTDAEACAKLLGVRYDVVPIEEP 351 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F S + + + SG+ EN+QSR RG +LMA+SN +MLLTT NKSE+S GY T+ Sbjct: 352 VAGFTSALEKMFEGTQSGVTEENLQSRTRGVVLMAISNKFGSMLLTTGNKSEVSAGYATI 411 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KDLYK++VF+L++WRN+H LGP VIP I+ + PSAELRP Q Sbjct: 412 YGDMNGGFNPIKDLYKSRVFKLSNWRNTHMPKGCLGPEGRVIPERIITRPPSAELRPDQK 471 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTK 537 D++SLPPY ++DDI+ ++E E S + +D + V+ +EHLLY SEYKRRQA G K Sbjct: 472 DEDSLPPYEVMDDILHCLIEEEMSVTDIVARGHDRDLVKRIEHLLYISEYKRRQAAPGVK 531 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T ++FGRDR YPI N FRD Sbjct: 532 VTKRNFGRDRRYPIVNGFRDQ 552 >gi|182677746|ref|YP_001831892.1| NAD synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633629|gb|ACB94403.1| NAD+ synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 557 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 277/558 (49%), Positives = 371/558 (66%), Gaps = 8/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L IA+AQ+N VGDI GN+A+ R AR +A+ G DL++F+ELFISGYPPEDLV K S Sbjct: 7 VDRLVIALAQINSTVGDIDGNLARIREARAKAHGFGADLVMFSELFISGYPPEDLVLKPS 66 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F AC A + L +T DGG I+VG P + N+ +L G I A+R K++LPNY Sbjct: 67 FQDACRVACENLARETADGGPAILVGLPWGELGACYNAYALLAHGRIEAMRFKVDLPNYG 126 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F +G PI+F+ +R+GI ICEDIW + + + + G E L N SPY+ Sbjct: 127 VFDEKRVFRAGPLQGPIIFKGVRIGIPICEDIWGPDPV-ECIAETGGEILLVPNGSPYWE 185 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 +K +R +V +IS HLP+IY+NQ+GGQDEL+FDGA+F + LA Q+ F Sbjct: 186 SKSSERLSVVKARISETHLPLIYLNQLGGQDELVFDGATFALNADGTLACQLPAFEAIIA 245 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 T W ++ ++ T I + ++ADY AC+L LRDYV+K F V++GLSG Sbjct: 246 KTVWERRGD----TFVCVEAPKTQVI--EGDDADYTACMLGLRDYVEKIGFPGVVLGLSG 299 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 G+DSALCAA+AVDALG+E V +MLPY+YTS +SL DA ACA ALG +YD++PI V Sbjct: 300 GVDSALCAALAVDALGREKVHAVMLPYRYTSQESLIDAKACATALGLRYDIVPIAPAVEG 359 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F +L++ G+ EN+QSR RG +LM++SN +ML+TT NKSE+SVGY T+YGD Sbjct: 360 FETLLAPMFAGTAPGLTEENLQSRTRGTVLMSISNKFGSMLVTTGNKSEMSVGYATIYGD 419 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YKTQVF+L RN LGP EVIP +I+ K PSAELR +Q DQ+ Sbjct: 420 MNGGFNPIKDIYKTQVFRLCHLRNRWKPKGALGPDGEVIPYNIIVKPPSAELRENQKDQD 479 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY ILD I++ +VE ++ + Y + T+R VE LLY +EYKRRQ+ G K+T Sbjct: 480 SLPPYDILDGILEGLVEKDQGVADLVAAGYEEPTIRRVERLLYLAEYKRRQSAPGVKVTR 539 Query: 541 KSFGRDRLYPISNKFRDH 558 ++FGRDR YPI N FRD Sbjct: 540 RNFGRDRRYPIVNGFRDR 557 >gi|90423585|ref|YP_531955.1| NAD synthetase [Rhodopseudomonas palustris BisB18] gi|90105599|gb|ABD87636.1| NH(3)-dependent NAD(+) synthetase [Rhodopseudomonas palustris BisB18] Length = 587 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 285/560 (50%), Positives = 371/560 (66%), Gaps = 13/560 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 KI +AQLNP VGDIAGN AR AR A G LI+F ELFISGYPPEDLV K +F Sbjct: 10 FKITLAQLNPTVGDIAGNAGLARAARARAAADGAQLIVFPELFISGYPPEDLVLKPAFQA 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A++ L DT DGG ++VG P D + N+ +LDAG I A+R K+NLPNY F Sbjct: 70 ACRAAVEDLARDTADGGPAMLVGSPWVDGGKLYNACALLDAGAIAAIRFKVNLPNYGVFD 129 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNASPY 179 EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L N SPY Sbjct: 130 EKRVFCRGPVSGPVTIRGVRVGVPICEDTWMEESADYENVVECLAETGAEILIVPNGSPY 189 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R + +++ LP+IYVNQVGGQDEL+FDGASF + + LA Q+ F + Sbjct: 190 ARGKADLRLSVQVARVTESDLPLIYVNQVGGQDELVFDGASFALNADRTLAAQLPAFEQS 249 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 +T + S W D A I +++EADY ACVL LRDYV KN F V++G+ Sbjct: 250 --LTTLRWVNGDSGWRC---DGAIAPVI--EDDEADYAACVLGLRDYVNKNGFPGVLLGI 302 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSALCAAIAVDALG E V+ +MLP+++T+ SL+DAA A ALG KY+VLPI V Sbjct: 303 SGGIDSALCAAIAVDALGVERVRGVMLPFRFTAQVSLDDAAKLAGALGFKYEVLPIAQAV 362 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F +++ + P I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TLY Sbjct: 363 NGFEEILAGTFRGLPRDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATLY 422 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGFNP+KD+YKT+VF+L + RN+ LGP EVIP +I+ + P+AELR +QTD Sbjct: 423 GDMNGGFNPIKDIYKTEVFRLCTLRNAWKPDGALGPSGEVIPVNIITRPPTAELRENQTD 482 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY ILD I++R+VE E+ ++ +TV ++ LL +EYKRRQA G K+ Sbjct: 483 QDSLPPYDILDGILERLVEREQPLAEIVAAGFDRDTVVRIDRLLNIAEYKRRQAAPGVKV 542 Query: 539 TAKSFGRDRLYPISNKFRDH 558 T K+FGRDR YPI+N+FRD Sbjct: 543 TRKNFGRDRRYPITNRFRDS 562 >gi|298290916|ref|YP_003692855.1| NAD+ synthetase [Starkeya novella DSM 506] gi|296927427|gb|ADH88236.1| NAD+ synthetase [Starkeya novella DSM 506] Length = 557 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 276/557 (49%), Positives = 376/557 (67%), Gaps = 12/557 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L IA AQLNPVVGDIAGN+ KAR AR +A QG +L+LFTELFI+GYP EDLV K +F Sbjct: 8 QLLIAFAQLNPVVGDIAGNLIKAREARAQAAEQGAELVLFTELFIAGYPLEDLVLKPAFQ 67 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +A++ L DT DGG +++G P D + + N+V++LD G ++ R K++LPNY F Sbjct: 68 AACRAAVEELAKDTADGGPAVLIGSPWADGDKLYNAVLLLDGGKVVTARYKVDLPNYGVF 127 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F G PI F+ +R+G+ +CEDIW + ++ + L + G+E L N SPY Sbjct: 128 DEKRVFAPGPMPGPIPFKGVRIGVPVCEDIW-SQDVIECLAETGSELLLIPNGSPYRRTV 186 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +R + ++ LP+ YVNQVGGQDEL+FDGASF + + LA QM +F E+ +T Sbjct: 187 YDERMNVAVARVVESGLPLAYVNQVGGQDELVFDGASFVLNADRSLAVQMPNFQERIRLT 246 Query: 244 EWHYDQQLSQW--NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 W +W + ++ A + L ++EADY ACV+ LRDYV+KN F V++GLSG Sbjct: 247 RWE------RWAEGWRCEEGARSPL--LLDDEADYAACVMGLRDYVEKNRFPGVVLGLSG 298 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 G+DSAL AA+AVDALG E V +MLPY+YTS +SL DAAA A+ALG +YD++PI + V Sbjct: 299 GVDSALVAAMAVDALGAERVHCVMLPYRYTSNESLSDAAAVAEALGVRYDIVPIAESVEA 358 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 +++ P + EN+QSR+RG +LM++SN +M++TT NKSE+S GY TLYGD Sbjct: 359 LEKVLAPMFDGRPRDVTEENLQSRVRGTLLMSISNKFGSMVVTTGNKSEMSTGYATLYGD 418 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GG+NPLKDLYKTQVF+L RN LGP V+P +++ K P+AELR +Q DQ+ Sbjct: 419 MNGGYNPLKDLYKTQVFRLCHLRNRWKPAYALGPSGAVMPENVIVKPPTAELRENQKDQD 478 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LD I+ R+VE E + E D T V VE +L +EYKRRQA G K+TA Sbjct: 479 SLPPYDVLDAILLRLVEREMPVADIVAEGYDATLVARVERMLNIAEYKRRQAAPGVKVTA 538 Query: 541 KSFGRDRLYPISNKFRD 557 ++FGRDR YPI+N+FR+ Sbjct: 539 RNFGRDRRYPITNRFRE 555 >gi|27378891|ref|NP_770420.1| NAD synthetase [Bradyrhizobium japonicum USDA 110] gi|27352040|dbj|BAC49045.1| NAD synthetase [Bradyrhizobium japonicum USDA 110] Length = 585 Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust. Identities = 278/566 (49%), Positives = 370/566 (65%), Gaps = 19/566 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L + +AQLNP VGD+ GN A+AR AR A G DL+LF ELFI+GYPPEDLV K + Sbjct: 5 LNAFAVTLAQLNPTVGDVEGNAARARAARVRAAADGADLVLFPELFIAGYPPEDLVQKPA 64 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F AC +AI+ L +T DGG ++VG P + + N+ +LD G I +R K NLPNY Sbjct: 65 FQAACRAAIEGLARETADGGPAMLVGTPWVEDGKLYNACALLDGGRIAGLRFKCNLPNYG 124 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNA 176 F EKR F G + P+ R +R+G+ ICEDIW + N+ + L + GAE + N Sbjct: 125 VFDEKRLFARGPAAGPVTVRGVRIGVPICEDIWLDESEDYENVVETLAETGAEIILVPNG 184 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY +K R + +++ LP++Y+NQV GQDEL+FDGASF +G LA Q+ F Sbjct: 185 SPYARDKNDVRLSVAVARVTESGLPLVYLNQVCGQDELVFDGASFALNGDLSLAAQLPAF 244 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 +E +T + + W +A + + ADY ACVL LRDYV KN F V+ Sbjct: 245 AES--ITTLRFTRNGEDWRCAGPIAAQP-----EGDHADYAACVLGLRDYVAKNGFPGVL 297 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +G+SGGIDSALCAAIAVDALG + V +MLPY+YT+ S+ DA A LG +Y+VLPI Sbjct: 298 LGISGGIDSALCAAIAVDALGADQVHGVMLPYRYTAASSIADAGELAGHLGIRYEVLPIA 357 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + V F +++S + P I EN+Q+R RG +LMA+SN + M++TT NKSE+SVGY Sbjct: 358 EAVTGFETILSGIFKNLPPDITEENLQARTRGTLLMAISNKTGLMVVTTGNKSEMSVGYA 417 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGFNP+KD+YKTQVF+LA+ RNS GLGP EVIPP I+ + P+AELR + Sbjct: 418 TLYGDMNGGFNPIKDIYKTQVFRLAALRNSWRPEGGLGPAGEVIPPDIITRPPTAELREN 477 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEHLLYGSEYKRRQA 532 QTDQ+SLP Y +LD I++R+VE EE DQ ++ ETV ++HLL +EYKRRQA Sbjct: 478 QTDQDSLPTYDVLDAILERLVEREEPL---DQIIAAGFDRETVTRIDHLLNVAEYKRRQA 534 Query: 533 PVGTKITAKSFGRDRLYPISNKFRDH 558 G K+T ++FGRDR YPI+N+FRD Sbjct: 535 APGVKVTPRNFGRDRRYPITNRFRDK 560 >gi|312115466|ref|YP_004013062.1| NAD+ synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311220595|gb|ADP71963.1| NAD+ synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 554 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 282/560 (50%), Positives = 373/560 (66%), Gaps = 8/560 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +IA AQLNPV+GD+AGN+A AR AR++A DL++FTELFI+GYPPEDL+ K Sbjct: 1 MTASFRIACAQLNPVLGDLAGNVALARAARDDARALAADLVVFTELFIAGYPPEDLILKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ AC A L + T DGG +++G P + N+V +L G I A+R K++LPNY Sbjct: 61 AFVAACMEATRALAATTADGGPALLIGTPWGEDGKAYNAVALLAGGRIQALRYKVDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F G +P+ F +RLG+ ICEDIW + + L +GAE L S N SP+ Sbjct: 121 SVFDEKRVFAPGPLPEPVDFAGLRLGLPICEDIWTPA-VVGSLAARGAELLISPNGSPFT 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ +++ LP++Y+NQ GGQDEL+FDGASF + LA Q+ + Sbjct: 180 LKKRTQRLDVARARVAETGLPLLYINQFGGQDELVFDGASFALNRDGALAAQLPAWETAL 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +TEW D W + SA + EA Y ACV+ LRDYV+KN F V++GLS Sbjct: 240 AITEWRRDA--GGWACVEGPSARVE----EGREAAYLACVIGLRDYVEKNRFPGVVLGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+CAA+A DALG V IMLPY+YTS SL+DAAACA+ALG +YD++PIH V Sbjct: 294 GGIDSAICAAMATDALGAARVHCIMLPYRYTSNASLDDAAACAEALGVRYDIVPIHTAVE 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +++ + G+ EN+QSRIRG LMA+SN M++TT NKSE+S GY TLYG Sbjct: 354 AFGGMLAPLFKGAEPGLAEENLQSRIRGTTLMAVSNKFGGMVVTTGNKSEVSAGYATLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNP+KDLYKTQVF L+ +RN H LGP VIP +I+ K+P+AELR +QTDQ Sbjct: 414 DMNGGFNPIKDLYKTQVFALSRFRNEHVPKGCLGPGGVVIPDNIITKAPTAELRENQTDQ 473 Query: 481 ESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LDDI++ +V+ EE + + ETV+ VE LLY SEYKRRQA G KIT Sbjct: 474 DSLPPYDVLDDILESLVDREEPLSAVVARGHAPETVKKVERLLYLSEYKRRQAAPGVKIT 533 Query: 540 AKSFGRDRLYPISNKFRDHI 559 ++FGRDR YPI N+FR+ + Sbjct: 534 ERNFGRDRRYPIVNRFREQL 553 >gi|158422537|ref|YP_001523829.1| NAD synthetase [Azorhizobium caulinodans ORS 571] gi|158329426|dbj|BAF86911.1| NAD+ synthase [Azorhizobium caulinodans ORS 571] Length = 566 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 271/556 (48%), Positives = 367/556 (66%), Gaps = 9/556 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + L+IA+AQLNPVVGD+AGN K R AR+EA QG DL++F+ELF++GYPPEDLV K +F Sbjct: 17 ETLRIAVAQLNPVVGDVAGNAEKVRMARDEAALQGADLVVFSELFLAGYPPEDLVLKPAF 76 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 QAC +A+D L ++T GG ++VG P + + N V +L+ G I A R K++LPNY Sbjct: 77 QQACRAALDELAAETV-GGPALLVGAPWVEDGHLHNGVFLLEGGRIAAKRFKVDLPNYGV 135 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F+ G PI F+ +RLG+ +CEDIW ++ + L + GAE L N SPY + Sbjct: 136 FDEKRVFVPGPLPGPIPFKGVRLGVPVCEDIW-GPDVVECLSETGAEILIVPNGSPYRRS 194 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 +R I ++ LP++YVNQVGGQDEL+FDGASF + + Q F+E+ Sbjct: 195 VYDERANIAVARVVESGLPLLYVNQVGGQDELVFDGASFALNADRTQVMQFPGFAERVRT 254 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 T+W + + W A L+ + ADY ACVL L+DYV KN F V++GLSGG Sbjct: 255 TQWRRYE--NGWKCEEAPFADR----LEGDRADYAACVLGLKDYVNKNRFPGVVLGLSGG 308 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+CAA+AVDALG E V IMLPY++TS SL DAA A+ LG +YD LPI V Sbjct: 309 IDSAICAAMAVDALGPERVHCIMLPYRFTSQDSLSDAADVARRLGVRYDTLPIAPAVEAL 368 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 +++ + EN+QSR+RG +LM++SN AM++TT NKSE+S GY TLYGDM Sbjct: 369 EGVLAPLFAGRERDVTEENLQSRVRGTLLMSVSNKFGAMVVTTGNKSEMSTGYATLYGDM 428 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GG+NP+KDLYKT+VF+L+ RN+ T LGP VIP ++++K P+AELR +Q DQ+S Sbjct: 429 NGGYNPIKDLYKTEVFRLSRLRNTWKPTGALGPDGIVIPDALIDKPPTAELRENQKDQDS 488 Query: 483 LPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD I+ R+VE E + ++ V+ VE +L +EYKRRQA G K+T + Sbjct: 489 LPPYEVLDAILARLVEAETPVAQLIADGFDPAVVKRVERMLNIAEYKRRQAAPGVKVTTR 548 Query: 542 SFGRDRLYPISNKFRD 557 +FGRDR YPI+N FRD Sbjct: 549 NFGRDRRYPITNGFRD 564 >gi|192290590|ref|YP_001991195.1| NAD synthetase [Rhodopseudomonas palustris TIE-1] gi|192284339|gb|ACF00720.1| NAD+ synthetase [Rhodopseudomonas palustris TIE-1] Length = 587 Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust. Identities = 279/561 (49%), Positives = 376/561 (67%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L I++AQLNP VGDIAGN KAR AR +A G DLI++ ELFI+GYPPEDLV K +F Sbjct: 7 RLTISLAQLNPTVGDIAGNADKARAARRQAAADGADLIVYPELFIAGYPPEDLVLKPAFQ 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +AI+ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 67 AACRAAIEDLARETADGGPAMLIGSPWVDNGKLYNACALLDGGRIAAIRHKVNLPNYGVF 126 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNASP 178 EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L N SP Sbjct: 127 DEKRVFARGPVSGPVTIRGVRIGVPICEDTWLEESEDYENVVECLAETGAELLVVPNGSP 186 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++YVNQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 187 YARGKNDMRMSVSVARVTESDLPLVYVNQVGGQDELVFDGASFVLNADRTLAAQLPGFVE 246 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 +T + + + W D + + ++ +EADY ACVL LRDYV+KN F V++G Sbjct: 247 S--VTTLSFVKGAAGWR--CDGPVAPV---IEGDEADYAACVLGLRDYVRKNGFPGVLLG 299 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG + V+ +MLP++YT+ SL+DA A ALG Y+VLPI Sbjct: 300 ISGGIDSALCAAIAVDALGADKVRGVMLPFRYTAQISLDDAGRLASALGFGYEVLPIAQA 359 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F +++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 360 VEGFEAILAKPFAGLERDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 419 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKTQVF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 420 YGDMNGGFNPIKDIYKTQVFRLSSLRNRWKPDDALGPDGEVIPESIIIRPPTAELRENQT 479 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE E+ + E ++ +TV ++ LL +EYKRRQA G K Sbjct: 480 DQDSLPPYDVLDAILERLVEREQPLASIVAEGFDKDTVVRIDRLLNIAEYKRRQAAPGVK 539 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 540 VTRKNFGRDRRYPITNRFRDK 560 >gi|75675418|ref|YP_317839.1| NAD synthetase [Nitrobacter winogradskyi Nb-255] gi|74420288|gb|ABA04487.1| NH(3)-dependent NAD(+) synthetase [Nitrobacter winogradskyi Nb-255] Length = 583 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 276/560 (49%), Positives = 362/560 (64%), Gaps = 13/560 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 KI + QLNP VGDI GN AKAR AR +A G L+ ELFI+GYPPEDLV + +F Sbjct: 6 FKITLGQLNPTVGDIVGNAAKARAARAQAKADGAALVALPELFIAGYPPEDLVLRPAFQA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC AI+ L +T DGG +++G P D + N+ +LD G + A+R K+NLPNY F Sbjct: 66 ACREAIEALARETSDGGPAMLIGTPWVDDGKLYNAYALLDEGRVAALRFKVNLPNYGVFD 125 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASPY 179 EKR F G P+ R +R+G+ ICED W + N+ + L + GAE L N SPY Sbjct: 126 EKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESAEYENVVECLAETGAEILVVPNGSPY 185 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R I +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 186 AKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLPFFEES 245 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 F +W + W A + + ++ADY ACVL LRDYV+KN F V++G+ Sbjct: 246 VFTLQWTRSAE--GWR-----CAGPVAPQIDGDKADYAACVLGLRDYVRKNGFPGVLLGV 298 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSALCAAIAVDALG E V+ +MLP+++T+ SL+DAA A ALG +YDVLPI V Sbjct: 299 SGGIDSALCAAIAVDALGAEQVRGVMLPFRFTAQVSLDDAARLATALGIRYDVLPIAQAV 358 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F ++S P I EN+QSR RG +LMA+SN AM++TT NKSE+SVGY TLY Sbjct: 359 NGFEEILSGVFAGAPRDITEENLQSRARGTLLMAMSNKLGAMVVTTGNKSEMSVGYATLY 418 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGFNP+KD+YKT+V ++AS RN+ LGP EVIPP + + P+AELR Q D Sbjct: 419 GDMNGGFNPIKDIYKTEVLRMASLRNAWKPDGALGPSGEVIPPGAISRPPTAELREGQLD 478 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY +LD I++R+VE EE E ++ + V V+ LL +EYKRRQA G K+ Sbjct: 479 QDSLPPYDLLDAILERLVEREEPLAAIVAEGFDHDVVVRVDRLLNAAEYKRRQAAPGVKV 538 Query: 539 TAKSFGRDRLYPISNKFRDH 558 T ++FGRDR YPI+N+FRD Sbjct: 539 TRRNFGRDRRYPITNRFRDS 558 >gi|316934840|ref|YP_004109822.1| NAD+ synthetase [Rhodopseudomonas palustris DX-1] gi|315602554|gb|ADU45089.1| NAD+ synthetase [Rhodopseudomonas palustris DX-1] Length = 585 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 280/561 (49%), Positives = 376/561 (67%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L I++AQLNP+VGDIAGN KAR AR +A G DLI++ ELFI+GYPPEDLV K +F Sbjct: 7 RLTISLAQLNPMVGDIAGNADKARAARRQAAADGADLIVYPELFIAGYPPEDLVLKPAFQ 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +AI+ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 67 AACRAAIEELARETADGGPAMLIGSPWVDGGKLYNACALLDGGRIAALRFKVNLPNYGVF 126 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASP 178 EKR F G P+ R +R+G+ ICED W + N+ + L + GAE L N SP Sbjct: 127 DEKRVFSRGPVAGPMTIRGVRIGVPICEDTWLEESDEYENVVECLAETGAEILIVPNGSP 186 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 187 YAGGKTDLRMSVSVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRTLAAQLPGFVE 246 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 +T + + + W D + + L+ +EADY ACVL LRDYV+KN F V++G Sbjct: 247 S--ITTLSFVRGAAGWR--CDGPVAPV---LEGDEADYAACVLGLRDYVRKNGFPGVLLG 299 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG V+ +MLP++YT+ SL+DA A ALG Y+VLPI Sbjct: 300 ISGGIDSALCAAIAVDALGAGKVRGVMLPFRYTAQVSLDDAGRLAGALGFGYEVLPIAQA 359 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F +++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 360 VEGFEAILAKPFAGLARDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 419 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKTQVF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 420 YGDMNGGFNPIKDIYKTQVFRLSSLRNRWKPDDALGPDGEVIPESIIIRPPTAELRENQT 479 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE EE + E ++ +TV ++ LL +EYKRRQA G K Sbjct: 480 DQDSLPPYDVLDAILQRLVEREEPLASIVAEGFDKDTVVRIDRLLNIAEYKRRQAAPGVK 539 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 540 VTRKNFGRDRRYPITNRFRDK 560 >gi|115524006|ref|YP_780917.1| NAD synthetase [Rhodopseudomonas palustris BisA53] gi|115517953|gb|ABJ05937.1| NH(3)-dependent NAD(+) synthetase [Rhodopseudomonas palustris BisA53] Length = 587 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 274/558 (49%), Positives = 371/558 (66%), Gaps = 13/558 (2%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 + +AQLNP VGDIAGN AKAR AR +A G DLI+F ELF+SGYPPEDLV K +F AC Sbjct: 12 VTLAQLNPTVGDIAGNAAKARVARAQARDDGADLIVFPELFLSGYPPEDLVLKPAFQAAC 71 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +A++ L +T DGG +++G P D + N+ +LDAG I ++R K+NLPNY F EK Sbjct: 72 RAAVEELARETADGGPAMLIGSPWVDDGRLYNACALLDAGAIASIRYKVNLPNYGVFDEK 131 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNASPYYH 181 R F G + P+ R +R+G+ ICED W N+ + L + GAE L N SPY Sbjct: 132 RVFARGPVSGPMTIRGVRVGVPICEDTWMEESADYENVVECLAETGAELLIVPNGSPYAR 191 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K R + +++ LP++Y+NQVGGQDEL+FDGASF + LA Q+ F E Sbjct: 192 GKNDIRLAVQVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADCSLAAQLPGFRESVV 251 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 W+ + + + + + L +E DY ACVL LRDYV+KN F V++G+SG Sbjct: 252 TLRWNK----TNTGWRCEGPVAPL---LDGDEGDYAACVLGLRDYVRKNGFPGVLLGVSG 304 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSALCAAIAVDALG + ++ +MLP++YT+ SL+DAA A ALG Y VLPI V Sbjct: 305 GIDSALCAAIAVDALGADKLRGVMLPFRYTAQVSLDDAAKLAAALGFNYAVLPIAQAVEG 364 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F +++++ + P I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TLYGD Sbjct: 365 FEAILAETFKGLPRDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATLYGD 424 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YKT+VF+L+S RN LGP EVIP +I+ + P+AELR +QTDQ+ Sbjct: 425 MNGGFNPIKDIYKTEVFRLSSLRNRWKPDDALGPSGEVIPENIITRPPTAELRENQTDQD 484 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY ILD I++R+VE E+ + ++ +TV ++ LL +EYKRRQA G K+T Sbjct: 485 SLPPYDILDGILERLVEREQPLADIVAAGFDRDTVARIDRLLNVAEYKRRQAAPGVKVTR 544 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 545 KNFGRDRRYPITNRFRDS 562 >gi|39935055|ref|NP_947331.1| NAD synthetase [Rhodopseudomonas palustris CGA009] gi|39648906|emb|CAE27427.1| NH3-dependent NAD synthetase [Rhodopseudomonas palustris CGA009] Length = 584 Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust. Identities = 278/561 (49%), Positives = 375/561 (66%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L I++AQLNP VGDIAGN KAR AR A G DL+++ ELFI+GYPPEDLV K +F Sbjct: 6 RLTISLAQLNPTVGDIAGNADKARAARRRAAADGADLVVYPELFIAGYPPEDLVLKPAFQ 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +AI+ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 66 AACRAAIEDLARETADGGPAMLIGSPWVDNGKLYNACALLDGGRIAAIRHKVNLPNYGVF 125 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNASP 178 EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L N SP Sbjct: 126 DEKRVFARGPVSGPVTIRGVRIGVPICEDTWLEESEDYENVVECLAETGAELLVVPNGSP 185 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++YVNQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 186 YARGKNDMRMSVSVARVTESDLPLVYVNQVGGQDELVFDGASFVLNADRTLAAQLPGFVE 245 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 +T + + + W D + + ++ +EADY ACVL LRDYV+KN F V++G Sbjct: 246 S--VTTLSFVKGAAGWR--CDGPVAPV---IEGDEADYAACVLGLRDYVRKNGFPGVLLG 298 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG + V+ +MLP++YT+ SL+DA A ALG Y+VLPI Sbjct: 299 ISGGIDSALCAAIAVDALGADKVRGVMLPFRYTAQISLDDAGRLASALGFGYEVLPIAQA 358 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F +++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 359 VEGFEAILAKPFAGLERDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 418 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKTQVF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 419 YGDMNGGFNPIKDIYKTQVFRLSSLRNRWKPDDALGPDGEVIPESIIIRPPTAELRENQT 478 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE EE + + ++ +TV ++ LL +EYKRRQA G K Sbjct: 479 DQDSLPPYDVLDAILERLVEREEPLASIVADGFDKDTVVRIDRLLNIAEYKRRQAAPGVK 538 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 539 VTRKNFGRDRRYPITNRFRDK 559 >gi|154245324|ref|YP_001416282.1| NAD synthetase [Xanthobacter autotrophicus Py2] gi|154159409|gb|ABS66625.1| NAD+ synthetase [Xanthobacter autotrophicus Py2] Length = 569 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 279/554 (50%), Positives = 376/554 (67%), Gaps = 9/554 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L IA+AQLNP VGD+AGN+ ARR A G DL++F ELFI+GYPPEDLV K +F Q Sbjct: 23 LFIAVAQLNPTVGDVAGNLDLARRTSAGARDAGADLVVFPELFIAGYPPEDLVLKPAFQQ 82 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +AI+TL ++T DG A +++G P ++ + NSV++L+ G I AVR K++LPNY F Sbjct: 83 ACRAAIETLAAETADGPA-LLIGAPWVEEGKLYNSVLLLENGGISAVRHKVDLPNYGVFD 141 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G PI F+ +RLG+ ICEDIW +++ + L + GAE L N SPY + Sbjct: 142 EKRVFTPGPLPGPIPFKGVRLGVPICEDIW-GADVVECLAETGAELLIVPNGSPYRQSVY 200 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +R + ++ HLP++YVNQVGGQDEL+FDGASF + + LA Q F E+ +++ Sbjct: 201 AERENVAVARVVESHLPLLYVNQVGGQDELVFDGASFALNPDRFLALQFPGFMERVRISK 260 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + + W + + A ++ +EADY ACVL LRDYV KN F V++GLSGGID Sbjct: 261 WQRFE--NGWKCLGANLADR----IEGDEADYAACVLGLRDYVNKNRFPGVVLGLSGGID 314 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+AVDALG E V IMLPY+YTS +SL DAAA A+AL +YDVLPI V + Sbjct: 315 SAICAAMAVDALGPERVHCIMLPYRYTSEESLADAAAVAQALFVRYDVLPIVAGVEGMEA 374 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + + EN+QSR+RG +LM++SN AM++TT NKSE+S GY TLYGDM+G Sbjct: 375 ALAPLFEGTQRDVTEENLQSRVRGALLMSVSNKFGAMVVTTGNKSEMSTGYATLYGDMNG 434 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 G+NP+KDLYKTQV +L+ RN LGP VIP S+++K P+AELR +Q D++SLP Sbjct: 435 GYNPIKDLYKTQVTRLSRLRNRWKPADALGPDGVVIPDSLIDKPPTAELRENQKDEDSLP 494 Query: 485 PYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD I++R+VE E S + +N TV VE LL +EYKRRQA G K+T ++F Sbjct: 495 PYAVLDAILERLVEREHSVAQIIADGFNAATVTRVERLLNIAEYKRRQAAPGVKVTGRNF 554 Query: 544 GRDRLYPISNKFRD 557 GRDR YPI+N+FR+ Sbjct: 555 GRDRRYPITNRFRE 568 >gi|91976537|ref|YP_569196.1| NAD synthetase [Rhodopseudomonas palustris BisB5] gi|91682993|gb|ABE39295.1| NH(3)-dependent NAD(+) synthetase [Rhodopseudomonas palustris BisB5] Length = 585 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 279/561 (49%), Positives = 376/561 (67%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L I++AQLNP VGDIAGN A AR AR +A +G +L++F ELFISGYPPEDLV K +F Sbjct: 7 RLTISLAQLNPTVGDIAGNAAMARAARAQAAAEGAELVVFPELFISGYPPEDLVLKPAFQ 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +A++ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 67 TACRAAVEDLARETADGGPAMLIGSPWLDGGKLYNACALLDGGRIAAIRTKVNLPNYGVF 126 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNASP 178 EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L N SP Sbjct: 127 DEKRVFSRGPVSGPMTIRGVRVGVPICEDTWLEESEDYENVVECLAETGAEILIVPNGSP 186 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ F+E Sbjct: 187 YARGKSDLRLSVQVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLPAFAE 246 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 +T H+ + S W + + L +E DY ACVL LRDYV+KN F V++G Sbjct: 247 S--ITTLHWQKGASGWRCDGPVAPT-----LDGDEGDYAACVLGLRDYVRKNGFPGVLLG 299 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG + V+ +MLP++YT+ SL+DA A+ALG Y+VLPI Sbjct: 300 ISGGIDSALCAAIAVDALGADKVRGVMLPFRYTAQISLDDADGLARALGFGYEVLPIAAA 359 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 VN F ++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 360 VNGFEDILAKPFAGLERDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 419 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKT+VF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 420 YGDMNGGFNPIKDIYKTEVFRLSSLRNRWKPDGALGPDGEVIPESIIVRPPTAELRENQT 479 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE EE E ++ +TV ++ LL +EYKRRQA G K Sbjct: 480 DQDSLPPYEVLDAILERLVEREEPLATIVAEGFDRDTVVRIDRLLNIAEYKRRQAAPGVK 539 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 540 VTRKNFGRDRRYPITNRFRDK 560 >gi|85715402|ref|ZP_01046384.1| NAD(+) synthase [Nitrobacter sp. Nb-311A] gi|85697823|gb|EAQ35698.1| NAD(+) synthase [Nitrobacter sp. Nb-311A] Length = 583 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/560 (49%), Positives = 362/560 (64%), Gaps = 13/560 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 KI + QLNP VGDIAGN AKAR AR +A G L+ ELFI+GYPPEDLV + +F Sbjct: 6 FKITLGQLNPTVGDIAGNAAKARAARAQAKADGAALLALPELFIAGYPPEDLVLRPAFQA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC AI+ L +T DGG +++G P D + N+ +LD G + A+R K+NLPNY F Sbjct: 66 ACREAIEDLARETSDGGPAMLIGTPWVDDGKLYNAYALLDEGRVAAIRFKVNLPNYGVFD 125 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASPY 179 EKR F G P+ R +R+G+ ICED W + NI + L + GAE L N SPY Sbjct: 126 EKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESAEYENIVECLAETGAEILIVPNGSPY 185 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R I +++ LP++Y+NQVGGQDEL+FDGASF + LA Q F E Sbjct: 186 AKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADCSLAAQFPAFEES 245 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 +W + W + ++ +EADY ACVL LRDYV+KN F V++G+ Sbjct: 246 IVTLQWTRSAE--GWRCTGPVAPQ-----IEGDEADYAACVLGLRDYVRKNGFPCVLLGV 298 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSALCAAIAVDALG E V+ +MLP ++T+ SL+DAA A ALG +Y+VLPI V Sbjct: 299 SGGIDSALCAAIAVDALGAERVRGVMLPSRFTAQVSLDDAARLATALGIRYEVLPIAPAV 358 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F ++S P EN+QSR RG +LMA+SN + AML+TT NKSE+SVGY TLY Sbjct: 359 EGFEKILSATFAGLPRDTTEENLQSRARGTLLMAISNKTGAMLVTTGNKSEMSVGYATLY 418 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGFNP+KD++KT+VF+LAS RN+ GP EVIPPSI+ + P+AELR +Q D Sbjct: 419 GDMNGGFNPIKDIFKTEVFRLASLRNAWKPDGAFGPSGEVIPPSIIARPPTAELRENQLD 478 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY +LD I++R+VE EE + E ++ + + V+ LL +EYKRRQA G K+ Sbjct: 479 QDSLPPYELLDAILERLVEREEPLASIVAEGFDRDVIVRVDRLLNAAEYKRRQAAPGVKV 538 Query: 539 TAKSFGRDRLYPISNKFRDH 558 T ++FGRDR YPI+N+FRD Sbjct: 539 TRRNFGRDRRYPITNRFRDS 558 >gi|86750492|ref|YP_486988.1| NAD synthetase [Rhodopseudomonas palustris HaA2] gi|86573520|gb|ABD08077.1| NH(3)-dependent NAD(+) synthetase [Rhodopseudomonas palustris HaA2] Length = 585 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 276/561 (49%), Positives = 370/561 (65%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + I++AQLNP VGDI GN A AR AR +A + D+I+F ELFISGYPPEDLV K +F Sbjct: 7 RFTISLAQLNPTVGDITGNAAMARAARAQAAAENADVIVFPELFISGYPPEDLVLKPAFQ 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +A++ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 67 AACRAAVEELARETADGGPAMLIGSPWVDGGKLYNACALLDGGRIAAIRFKVNLPNYGVF 126 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNASP 178 EKR F G P+ R +R+G+ ICED W N+ + L + GAE L N SP Sbjct: 127 DEKRVFARGPVAGPVTIRGVRVGVPICEDTWLEESEDYENVVECLAETGAEILIVPNGSP 186 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ F+E Sbjct: 187 YARGKGDLRLSVQVARVTESDLPLVYLNQVGGQDELVFDGASFALNADRSLAAQLPAFAE 246 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 W Q S + D + +P +E DY ACVL LRDYV+KN F V++G Sbjct: 247 CITTLVW----QKSADGWRCDGPVAA--VP-DGDEGDYAACVLGLRDYVRKNGFPGVLLG 299 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG V+ +MLP++YT+ SL+DA+ A ALG Y+VLPI Sbjct: 300 ISGGIDSALCAAIAVDALGAGRVRGVMLPFRYTAQISLDDASRLANALGFGYEVLPIAQA 359 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F +++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 360 VEGFEAILAKPFAGLARDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 419 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKTQVF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 420 YGDMNGGFNPIKDIYKTQVFRLSSLRNRWKPDGALGPDGEVIPESIIVRPPTAELRENQT 479 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE E+ + E ++ +TV ++ LL +EYKRRQA G K Sbjct: 480 DQDSLPPYEVLDAILERLVEREQPLASIVAEGFDKDTVMRIDRLLNIAEYKRRQAAPGVK 539 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 540 VTRKNFGRDRRYPITNRFRDK 560 >gi|209885642|ref|YP_002289499.1| glutamine-dependent NAD(+) synthetase [Oligotropha carboxidovorans OM5] gi|209873838|gb|ACI93634.1| glutamine-dependent NAD(+) synthetase [Oligotropha carboxidovorans OM5] Length = 584 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 272/566 (48%), Positives = 369/566 (65%), Gaps = 13/566 (2%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++ + +AQ+NP VGDI+GN AKA AR +A G L++ ELF+ GYPPED+V K +F Sbjct: 5 ERFVVTLAQINPTVGDISGNAAKAWAARAKAAADGASLLVLPELFLCGYPPEDIVLKPAF 64 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 C + I+TL T DGG +++G P D+ + N+V +LD G + +R K NLPNY Sbjct: 65 QARCRAEIETLARATADGGPAVLIGTPWVDEGKLYNAVALLDGGRVAGLRFKANLPNYGV 124 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNAS 177 F EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L N S Sbjct: 125 FDEKRIFARGPAAGPLTVRGVRIGVPICEDTWMEESAEYENVVECLAETGAEILIVPNGS 184 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY NK R + +I+ LP IY+NQVGGQDEL+FDGASF + + LA Q+ F Sbjct: 185 PYARNKNDIRLSMAVARITESGLPFIYLNQVGGQDELVFDGASFAINADRSLAAQLPCFQ 244 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E W D+ + S M L+ + ADY ACVL LRDYV KN F V++ Sbjct: 245 ESITTLTWLRDEN----GWTCKGPVSPM---LEGDRADYAACVLGLRDYVGKNGFPGVLL 297 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 G+SGGIDSALC AIAVDA+G E V+ +MLPY++T+ +S+EDAA A+A G +Y+VLPI Sbjct: 298 GISGGIDSALCLAIAVDAIGVERVRGVMLPYRFTAKESIEDAARIARAFGIRYEVLPIAA 357 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 V F ++ + +P + EN+Q+R RG +LMA+SN ML+TT NKSE+SVGY T Sbjct: 358 AVTGFEGILKDTFKGKPRDVTEENLQARTRGVLLMAISNKFGDMLVTTGNKSEMSVGYAT 417 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGFNP+KD+YKT+VF+L+S RNS LGP +VIP SI+ + P+AELR +Q Sbjct: 418 LYGDMNGGFNPIKDIYKTEVFRLSSLRNSWKPEGALGPSGKVIPVSIIARPPTAELRENQ 477 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY ILD I++R+VE++ S +E ++ +TV ++ LL +EYKRRQA G Sbjct: 478 TDQDSLPPYDILDGILERLVEHDMSVAEIVEEGFDRDTVMRIDRLLNLAEYKRRQAAPGV 537 Query: 537 KITAKSFGRDRLYPISNKFRDHISEE 562 K+T +SFGRDR YPI+N+FRD+ E Sbjct: 538 KVTRRSFGRDRRYPITNRFRDNGESE 563 >gi|299133610|ref|ZP_07026804.1| NAD+ synthetase [Afipia sp. 1NLS2] gi|298591446|gb|EFI51647.1| NAD+ synthetase [Afipia sp. 1NLS2] Length = 584 Score = 528 bits (1360), Expect = e-148, Method: Compositional matrix adjust. Identities = 276/563 (49%), Positives = 365/563 (64%), Gaps = 17/563 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K + +AQLNP VGDIAGN AKAR AR +A G L++ ELF+ GYPPED+V K SF Sbjct: 6 KFTVTLAQLNPTVGDIAGNAAKARDARAKAAADGAALVVLPELFLCGYPPEDIVLKPSFQ 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 C A++ L +T DG +++G P ++ + N+V +LD G I +R K NLPNY F Sbjct: 66 ARCRIAVEELARETSDGSPAVLIGTPWVEEGKLYNAVALLDGGRIAGLRFKANLPNYGVF 125 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNASP 178 EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L N SP Sbjct: 126 DEKRIFARGPAAGPLTIRGVRIGVPICEDTWMEESAEYENVVECLSETGAEILIVPNGSP 185 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + G+++ LP +YVNQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 186 YARAKNDIRLSMAVGRVTESGLPFVYVNQVGGQDELVFDGASFALNADRSLAAQLPCFEE 245 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE-EEADYNACVLSLRDYVQKNNFHKVII 297 W + W S PL E + ADY ACVL LRDYV KN F V++ Sbjct: 246 VTTTLTWT--KSAKGWTCKGPIS------PLIEGDRADYAACVLGLRDYVGKNGFPGVLL 297 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 G+SGGIDSALC AIAVDA+G E V+ +MLP+++T+ +S+EDAA A+ LG +YDVLPI Sbjct: 298 GISGGIDSALCLAIAVDAIGVERVRGVMLPFRFTAKESIEDAARIARGLGIRYDVLPIAA 357 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 VN F ++ +P + EN+Q+R RG +LMA+SN ML+TT NKSE+SVGY T Sbjct: 358 AVNGFEDILKDVFNGKPRDVTEENLQARTRGVLLMAISNKFGDMLVTTGNKSEMSVGYAT 417 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGFNP+KD+YKT+VF+L+S RNS LGP +VIP SI+ + P+AELR +Q Sbjct: 418 LYGDMNGGFNPIKDIYKTEVFRLSSLRNSWKPEGALGPSGKVIPVSIIARPPTAELRENQ 477 Query: 478 TDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 TDQ+SLPPY ILD I++R+VE + S I D ++ +TV ++ LL +EYKRRQA G Sbjct: 478 TDQDSLPPYEILDGILERLVERDMSVAEIVGDG-FDRDTVLRIDRLLNLAEYKRRQAAPG 536 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 K+T K+FGRDR YPI+N+FRD+ Sbjct: 537 VKVTRKNFGRDRRYPITNRFRDN 559 >gi|300023353|ref|YP_003755964.1| NAD+ synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299525174|gb|ADJ23643.1| NAD+ synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 575 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 273/559 (48%), Positives = 357/559 (63%), Gaps = 9/559 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQLN VGD+AGN +A A +A D+I+F ELF++GYPPEDLV K +F Sbjct: 1 MRIALAQLNATVGDLAGNARRAAEAHAKAAALSADVIVFPELFLNGYPPEDLVLKPAFQD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + ++ L + +G A ++ R+D + V N+V +LD G I A+ K LPNY F Sbjct: 61 ATRAELERLATACAEGPAILMGTIWRKDGK-VYNAVALLDRGRIEAITAKAELPNYGVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F SG P+ R +R+G+ ICEDIW + + L + GAE + S N SP+ +K Sbjct: 120 EKRVFASGPMPGPLNVRGVRIGVPICEDIWTPEAV-ETLAETGAEIIISPNGSPFDWHKP 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R I +++ LP+ Y+NQVGGQDEL+FDGASF +G + LA Q+ + E +TE Sbjct: 179 DTRMNIAVARVTESGLPLAYLNQVGGQDELVFDGASFVLNGDRSLAVQLPAWREALVVTE 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + S W S + A A Y+ACVL LRDYV KN F V++GLSGGID Sbjct: 239 WQHTP--SGWRCQSGEVAKLS----DGSAAAYDACVLGLRDYVDKNAFPGVVLGLSGGID 292 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AAIAVDALG + V +MLP K+TS SL+DAA CAKALG +YD + I V Sbjct: 293 SALVAAIAVDALGPDRVHAVMLPSKFTSDDSLQDAAECAKALGIRYDKVSIEPAVAGLTW 352 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + S I EN+QSR+RG ILMA+SN AML+TT NKSE+SVGY TLYGDM+G Sbjct: 353 SLKDLFAGTNSDITEENLQSRVRGTILMAISNKFGAMLVTTGNKSEMSVGYATLYGDMNG 412 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYKT+V+ L+ WRN GP VIP IL K+P+AELR +QTDQ+SLP Sbjct: 413 GFNPIKDLYKTEVYALSRWRNEQRPDGAFGPQGIVIPERILTKAPTAELRANQTDQDSLP 472 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY LDDI+ +VE E + + ETV+ VE LLY +EYKRRQA G KI++++F Sbjct: 473 PYDALDDILVSLVEKEMPVAAVIARGHTLETVKKVERLLYLAEYKRRQAAPGVKISSRNF 532 Query: 544 GRDRLYPISNKFRDHISEE 562 GRDR YPI+N+FR+ + E Sbjct: 533 GRDRRYPITNRFREDVPSE 551 >gi|163793633|ref|ZP_02187608.1| Glutamine-dependent NAD(+) synthetase [alpha proteobacterium BAL199] gi|159181435|gb|EDP65950.1| Glutamine-dependent NAD(+) synthetase [alpha proteobacterium BAL199] Length = 562 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 258/559 (46%), Positives = 353/559 (63%), Gaps = 12/559 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L I +AQLNP VGDIAGN+ K RR R +A +G D++L EL++ GYPPEDLV K Sbjct: 1 MTDTLTITLAQLNPRVGDIAGNLDKLRRVRAQAAAEGADVVLTPELYLCGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ A++ L +T DGG ++VG P D + N++V+LDAG ++ R K++LPNY Sbjct: 61 MFVAEIRDAVEALARETGDGGPAVLVGAPWLDDGKLYNAMVLLDAGEVVTARYKVDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F++G PI R +R+G+ ICEDIW +I + + + G E L N SP+ Sbjct: 121 GVFDEKRVFVAGPPPGPIDVRGVRIGVPICEDIW-TPDIVECVAETGGEILLIPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ ++ LP++Y+NQ+GGQDEL+FDGASF + + LA QM ++E Sbjct: 180 LGKSDVRVQLAVARVVESGLPLVYLNQIGGQDELVFDGASFVLNPDRSLALQMPAWTEAV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIG 298 T W + D T Q E E+ Y A + LRDYV KN F VI+G Sbjct: 240 VTTHWKRTPD----GWTCDTGVRTK----QPEGLESLYCALMTGLRDYVTKNGFPGVILG 291 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSA+ AAIAVDALG + V+ +M+P YTS SLEDAAA A+ +G +Y + I Sbjct: 292 MSGGIDSAISAAIAVDALGPDKVRCVMMPSPYTSDHSLEDAAAAAEMMGVQYSSINIGPA 351 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + F ++S+ I EN+Q+R RG LMALSN M+L+T NKSE+SVGY TL Sbjct: 352 MQAFDGMLSEAFAGTKPDITEENLQARSRGITLMALSNKFGHMVLSTGNKSEMSVGYATL 411 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG++ LKD+YK VF L+SWRNS+ GLGP ++P I+ K PSAELRP Q Sbjct: 412 YGDMCGGYSVLKDVYKMTVFALSSWRNSNKPAGGLGPDGPIMPERIITKPPSAELRPDQK 471 Query: 479 DQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D++SLPPYP+LD I+ ++ENE ++ ++ +TV + +L +EYKRRQAP G K Sbjct: 472 DEDSLPPYPVLDAILMELIENESPIATIVEKGFDSDTVLRIWRMLDRAEYKRRQAPPGVK 531 Query: 538 ITAKSFGRDRLYPISNKFR 556 +TA+SFGRDR YP++N F+ Sbjct: 532 VTARSFGRDRRYPLTNAFQ 550 >gi|87198992|ref|YP_496249.1| NAD synthetase [Novosphingobium aromaticivorans DSM 12444] gi|87134673|gb|ABD25415.1| NH(3)-dependent NAD(+) synthetase [Novosphingobium aromaticivorans DSM 12444] Length = 573 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 262/566 (46%), Positives = 354/566 (62%), Gaps = 23/566 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+ L+I +AQLN VGD+A N+A RE A + DLI+F EL + GYPPEDL+ K Sbjct: 19 MVDTLRITLAQLNQSVGDLAANVAAMLAVRERA--RDADLIVFPELQLIGYPPEDLIMKP 76 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + ++ ++ ++ L T DGG ++VG + N V +L+ G + A R K LPNY Sbjct: 77 ALVERATAELEKLARVTADGGPAMLVGSVFVRDGALHNGVALLEGGRVAATRFKYELPNY 136 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F+ G +P++F+ LG+ ICEDIW + ++C+HL + GAE +N SPY Sbjct: 137 GTFDEKRYFLPGPLPEPVLFKGAMLGLPICEDIW-HPDVCRHLAELGAEIFICINGSPYE 195 Query: 181 HNK-------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +K + KR I TG +P+ YVN+VGGQDE++FDGASF + + QM Sbjct: 196 IDKDVLRIDGVAKRRAIDTG------IPLAYVNRVGGQDEIVFDGASFVVGPEGAVWVQM 249 Query: 234 KHFSEQNFMTEWHYDQ--QLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + E T WH ++W A ++ + E Y A V++LRDYV KN Sbjct: 250 PDWEESVVTTVWHRSDFGDANRWRC----EAGEVHELAEHPEDIYCAMVMALRDYVNKNR 305 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F V++GLSGGIDSA+CAAIAVDALG + V +MLP +YTS +SL+DAA CA+ LG + D Sbjct: 306 FPGVVLGLSGGIDSAICAAIAVDALGPDRVWCVMLPSRYTSQESLDDAAGCARMLGVRLD 365 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 +PI V+ F +++ + ENIQSRIRG LMALSN ML+TT NKSE+ Sbjct: 366 TVPIGPAVDAFDGMLAPVFAGRQPDLTEENIQSRIRGVTLMALSNKFGPMLVTTGNKSEM 425 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 SVGY T+YGDM+GG+NPLKD YKT VF ++ WRNSH GLGP V+P I+ K PSA Sbjct: 426 SVGYATIYGDMNGGYNPLKDAYKTTVFAVSEWRNSHRPKIGLGPDGPVMPQRIITKPPSA 485 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRR 530 ELRP Q D +SLPPY +LD I++ +VENE+S E + +TV +E LL +EYKRR Sbjct: 486 ELRPDQKDSDSLPPYDVLDAILQGLVENEKSVDQIVAEGFERDTVARIERLLNLAEYKRR 545 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QAP G K+ A+++GRDR YPI++ FR Sbjct: 546 QAPPGVKLGARNYGRDRRYPITHGFR 571 >gi|114569533|ref|YP_756213.1| NH(3)-dependent NAD(+) synthetase [Maricaulis maris MCS10] gi|114339995|gb|ABI65275.1| NH(3)-dependent NAD(+) synthetase [Maricaulis maris MCS10] Length = 552 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/561 (46%), Positives = 367/561 (65%), Gaps = 13/561 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ + AQLNPVVGD+AGN+AKAR A EA +G D+++F E+F+ GYPPEDLV K Sbjct: 1 MTDRIILVTAQLNPVVGDVAGNLAKARAAHAEAKTRGGDMVVFPEMFLLGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S ++AC SA+D L + T DG A I++G P + + N+V +LD G ++A+R K LPNY Sbjct: 61 SAVEACRSALDALAAITRDGPA-ILIGLPWKQNSCLYNAVALLDEGRLVALRFKRELPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F EKR F +G D + +R I+LG+ ICED+W ++ + L +GAE + +LN SP+ Sbjct: 120 AVFDEKRVFEAGPLPDIVKWRGIKLGLPICEDLWLG-DVPRALIDKGAEMIITLNGSPWR 178 Query: 181 HNKLKKRHEIVTGQISHVHLP--IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 ++R + +G P +I+VNQVGGQDEL+FDGASF D + + ++ F E Sbjct: 179 RTIERERKQAFSGWFDSWASPKAMIFVNQVGGQDELVFDGASFSRDSEGREVQRLPAFEE 238 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVII 297 EW + W A + ++ EAD+ A +L DY+ KN F V++ Sbjct: 239 AIDAVEWVRTDK--GWF-----GAGGQIVSVKSGLEADWKAMTRALGDYIGKNGFPGVVL 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 G+SGGIDSA+ AAIAVDALG + V +M+P KYTS +S EDA ACA+ALG +YD++ + Sbjct: 292 GMSGGIDSAISAAIAVDALGADKVWAVMMPSKYTSQESFEDAKACAEALGIRYDIIDVEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + F +++S + EN+QSR RG +LMALSN M+L+T NKSE++VGY T Sbjct: 352 TIASFNAILSTPFKGTKPDTTEENLQSRARGVVLMALSNKFGPMVLSTGNKSEMAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GG+N LKD+YKT+VF+LA WRNS GLGP+ +VIP I+ K PSAEL Q Sbjct: 412 LYGDMNGGYNALKDIYKTEVFELAWWRNSANHQVGLGPVGQVIPERIITKPPSAELAEDQ 471 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGT 536 D++SLPPY +LD I+ ++E E S + +DE V+ +E+LLY +EYKRRQAP G Sbjct: 472 KDEDSLPPYDVLDAILYGLIEEERSVRELVADGHDEAEVKRIENLLYRAEYKRRQAPPGV 531 Query: 537 KITAKSFGRDRLYPISNKFRD 557 KI K+FGRDR YPI+N+FR+ Sbjct: 532 KIGPKNFGRDRRYPITNRFRN 552 >gi|94497814|ref|ZP_01304380.1| NAD+ synthetase [Sphingomonas sp. SKA58] gi|94422703|gb|EAT07738.1| NAD+ synthetase [Sphingomonas sp. SKA58] Length = 553 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 260/561 (46%), Positives = 346/561 (61%), Gaps = 15/561 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL IA+AQ+ VGD+ N R A +G DLI+F EL + GYPPEDLV K Sbjct: 1 MTDKLVIALAQMTQSVGDLKANADAMLEWRARA--KGADLIVFPELQLIGYPPEDLVLKP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + +D + +T DGG ++VG Q + N V +LD G + VR K LPNY Sbjct: 59 ALVTQADYQLDRMAQETADGGPAMLVGTVVAAQGVLFNVVALLDNGAVTTVRAKRELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G PI FR +++G+ ICEDIW + HL+ +GAE L S N SP+ Sbjct: 119 GTFDEKRLFAPGPLPAPIDFRGVKIGVPICEDIW-FPFVTAHLRSEGAEILISPNGSPFE 177 Query: 181 HNKLKKRHEIVTG-QISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +K +R V G ++ LP+ Y+N+VGGQDEL+FDGASF + +A Q+ + E Sbjct: 178 VDKDDRRLNAVAGTRVRETGLPLAYLNRVGGQDELVFDGASFVMNADLSIAQQLPDWEEA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIG 298 +T+W ++ QW + D L AD YNA VL LRDYV +N F +++G Sbjct: 238 LVLTQW--EKWDGQWVCLPGDRHE-----LDPRPADIYNAMVLGLRDYVNRNRFPGIVLG 290 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AA+AVDALG + V +M+P ++TS SL+DA ACA+ LG +YD++PI Sbjct: 291 LSGGIDSALSAAVAVDALGADRVWCVMMPSRFTSQDSLDDAVACARLLGVRYDIIPIEPA 350 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F +++ + EN+QSRIRG LMALSN MLLTT NKSE+SVGY T+ Sbjct: 351 VGAFDAMLGPVFDGRAPDLTEENLQSRIRGVTLMALSNKCGHMLLTTGNKSEMSVGYATI 410 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSH--GITSGLGPLTEVIPPSILEKSPSAELRPH 476 YGDM+GG++ LKD YKT VF L+ WRN+H + +G+GP V+P ++ K PSAELR Sbjct: 411 YGDMAGGYSVLKDAYKTTVFDLSRWRNAHVPSLGAGMGPAGPVMPERVITKPPSAELRAD 470 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D +SLPPY ILD I+ +VE E S + + + ETV +E LLY +EYKRRQAP G Sbjct: 471 QRDDDSLPPYEILDPILYGLVEEELSVDDLVARGFEKETVARIERLLYVAEYKRRQAPPG 530 Query: 536 TKITAKSFGRDRLYPISNKFR 556 K+ ++FGRDR YPI+N FR Sbjct: 531 VKLGIRNFGRDRRYPITNAFR 551 >gi|218461035|ref|ZP_03501126.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli Kim 5] Length = 430 Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust. Identities = 241/423 (56%), Positives = 299/423 (70%), Gaps = 7/423 (1%) Query: 137 PIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQIS 196 P+ FR +RLGI ICEDIW +C+ L + GAE L S N SPYY K+ RH++V Q+ Sbjct: 14 PVNFRGVRLGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKVDIRHQVVLKQVI 73 Query: 197 HVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNY 256 LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T W + S W+ Sbjct: 74 ETGLPLIYAAQLGGQDELVFDGASFAFNADRSLAFQMSEFETALAVTTWKRGE--SGWHC 131 Query: 257 MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 A IP ++EEADY AC+L RDYV KN F V++GLSGGIDSA+CAAIAVDAL Sbjct: 132 AEGPMAR---IP-EDEEADYRACLLGFRDYVNKNGFKTVVLGLSGGIDSAICAAIAVDAL 187 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 G+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S +S + SG Sbjct: 188 GEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSSALSDLFEGTESG 247 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 I EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+GGFNP+KDLYK Q Sbjct: 248 ITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQ 307 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 V+ LA WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLPPYP+LDDI++ + Sbjct: 308 VYALARWRNENVPPSALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLPPYPVLDDILECL 367 Query: 497 VENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 VE E + +D V VEHLLY +EYKRRQ+ G KIT K+FGRDR YPI+N+F Sbjct: 368 VEKEMAVEEIVARGHDVAIVHRVEHLLYLAEYKRRQSAPGVKITKKNFGRDRRYPITNRF 427 Query: 556 RDH 558 RD Sbjct: 428 RDR 430 >gi|326386431|ref|ZP_08208054.1| NAD synthetase [Novosphingobium nitrogenifigens DSM 19370] gi|326209092|gb|EGD59886.1| NAD synthetase [Novosphingobium nitrogenifigens DSM 19370] Length = 555 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 263/566 (46%), Positives = 346/566 (61%), Gaps = 23/566 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL I +AQLN VGD+A N R+ R A DLI+F E+ + GYPPEDL+ K Sbjct: 1 MADKLIITLAQLNQNVGDLAANAESVRKVRAAAMHS--DLIVFPEMHLIGYPPEDLIQKP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + I+ + + L T DGG ++VG + N V +L+ G I AVR K LPNY Sbjct: 59 ALIERAAHEMQELAKLTADGGPALLVGSVFVRDGALHNGVALLEGGRIAAVRFKYELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F+ G +P++F+ LG+ ICEDIW + ++C+HL + GAE +N SPY Sbjct: 119 GTFDEKRYFLPGPLPEPVLFKGAMLGLPICEDIW-HPDVCRHLAQLGAEIFICVNGSPYE 177 Query: 181 HNK-------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +K + KR I TG +P+ Y+N+VGGQDE++FDGASF + L Q Sbjct: 178 IDKDVLRIDGVAKRRAIDTG------IPLAYLNRVGGQDEIVFDGASFVVGPEGALWIQA 231 Query: 234 KHFSEQNFMTEWHYDQ--QLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + E TEW+ + +W + D ++ P + E Y A VL+LRDYV KN Sbjct: 232 PDWEEAVIHTEWNRVKVGNGHRWRCQAGD----VHEPTEHPEDIYCAMVLALRDYVNKNR 287 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F V++GLSGGIDSA+ AAIAVDALG E V +MLP +YTS +SL+DA CA+ LG + D Sbjct: 288 FPGVVLGLSGGIDSAITAAIAVDALGPERVWCVMLPSRYTSQESLDDAEGCARMLGVRLD 347 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 +PI V+ F +++ + + EN+QSRIRG LMALSN MLLTT NKSE+ Sbjct: 348 TIPIEPAVDGFAEMLAPVFADRKPDLTEENLQSRIRGTTLMALSNKFGPMLLTTGNKSEM 407 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 SVGY T+YGDM+GG+NPLKD YKT VF ++ WRN GLGP V+P IL K PSA Sbjct: 408 SVGYATIYGDMNGGYNPLKDAYKTTVFAISEWRNRARPKIGLGPDGPVMPERILTKPPSA 467 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRR 530 ELRP Q D +SLP YP+LD I+ +VE E S E Y+ TV +E LL+ +EYKRR Sbjct: 468 ELRPDQKDSDSLPDYPVLDAILMDLVEQERSVDQIVAEGYDRATVERIERLLHIAEYKRR 527 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QAP G K+ ++FGRDR YPI++ FR Sbjct: 528 QAPPGVKLGMRNFGRDRRYPITHAFR 553 >gi|283856355|ref|YP_162634.2| NAD synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|283775354|gb|AAV89523.2| NAD+ synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 558 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 246/559 (44%), Positives = 355/559 (63%), Gaps = 10/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L I +AQ+ VG N + R+EA + +DLILF EL + GYPPEDLV K Sbjct: 3 MTDQLTILLAQIPQTVGHCRRNADAMLKIRQEAGK--VDLILFPELQLIGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +Q ++ L T DGGA ++VG Q++ + N+V +LD G I A+R K +LPNY Sbjct: 61 SLLQNAKEELERLALATSDGGAAMLVGTAWQEKGRIFNAVALLDQGKIAAIRYKHDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G +P++FRD+ LGI +CEDIW +C HLK++GAE L N SP+ Sbjct: 121 GTFDEKRIFSAGPLPEPVLFRDVSLGIPVCEDIW-TEKLCAHLKERGAEILLVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K RH++V ++ LP +Y+N+VGGQDE++FDG SF + + + + Sbjct: 180 SGKYPVRHKVVADRVKETGLPCLYLNRVGGQDEVVFDGGSFVVNRDGAVPISLPQWQADC 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDYVQKNNFHKVIIG 298 ++T WH ++ + D+ + ++ Y A ++ L DYV++N F V++G Sbjct: 240 YVTHWHKTEE----GWSCDEGLQSKISEGEDRRLSDIYQAMMMGLGDYVRQNGFSGVLLG 295 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AA+AVDALG + V +MLP +YTS +SL+DA ACA+ LGC+ D +PI+ Sbjct: 296 LSGGIDSALSAAVAVDALGADKVWCVMLPSRYTSQESLDDARACAEMLGCRLDSVPINPA 355 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V +++ + I ENIQSR+RG +LMA+SN M+LTT NKSE++VGY TL Sbjct: 356 VEAIDGMLAPLFSGKKPDITEENIQSRLRGVVLMAISNKFSPMVLTTGNKSEMAVGYATL 415 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GG++ LKDLYK+ VF+++ WRNSH LGP V+P ++ K PSAELR Q Sbjct: 416 YGDMNGGYSVLKDLYKSDVFKVSRWRNSHKPAHALGPDGYVMPDRVITKPPSAELREDQK 475 Query: 479 DQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D +SLPPY ILD ++ ++E + S + + Y+ + V +E+LL+ +EYKRRQAP G K Sbjct: 476 DSDSLPPYDILDAVLHGLIEEDLSCSDLVKRGYDPDLVTRIENLLHRAEYKRRQAPPGVK 535 Query: 538 ITAKSFGRDRLYPISNKFR 556 + +++FGRDR YP+S++FR Sbjct: 536 LGSRNFGRDRRYPLSHQFR 554 >gi|209964282|ref|YP_002297197.1| NAD synthetase [Rhodospirillum centenum SW] gi|209957748|gb|ACI98384.1| glutamine-dependent NAD(+) synthase [Rhodospirillum centenum SW] Length = 559 Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust. Identities = 262/556 (47%), Positives = 352/556 (63%), Gaps = 8/556 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L IA+AQ+NP VG + N+ + R AR EA +G DL++ +EL +SGYPPEDLV K Sbjct: 1 MTDSLTIALAQINPTVGALRANLDRIRTARAEAAARGADLVVLSELVVSGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ A++ L +DT DGG G+++G P ++ N+ ++LD G + AVR K +LPNY Sbjct: 61 FFLDTVQQAVEELAADTGDGGPGLLLGAPWREAGRTHNAALLLDGGRVAAVRFKHDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G P+ FR +RLGI+ICED+W ++ + L + GAE L N SP+ Sbjct: 121 GPFDEKRVFDPGPLPGPVSFRGVRLGIVICEDMW-TPDVAETLAETGAEILIVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K +R + +++ LP+ YVNQVGGQDEL+FDG SF + + LA Q+ F E Sbjct: 180 TDKADRRLSLAVARVTETGLPLAYVNQVGGQDELVFDGGSFVLNADRGLAAQLPSFEEHV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T W W S + M P + EA Y A VL LRDYV+KN F VI+GLS Sbjct: 240 AITHWTRGD--GGWTCTS----TEMTAPAEGLEAIYRAMVLGLRDYVRKNRFPGVILGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+AVDALG + V +M+P YTS +SLEDAA CA+ LGC+ D + I + Sbjct: 294 GGIDSALSAAVAVDALGADRVHCVMMPSPYTSRESLEDAAECAELLGCRIDTISIEPAMK 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + I EN+QSR RG LMALSN M+L+T NKSE+SVGY TLYG Sbjct: 354 AFEHMLEPAFADREPDITEENLQSRARGVTLMALSNKFGGMVLSTGNKSEMSVGYATLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG++ LKD+YKT V++L+ WRN GP VIP I+ K+P+AEL+P QTDQ Sbjct: 414 DMCGGYSVLKDVYKTTVYRLSHWRNRTLPRQAHGPAGRVIPERIITKAPTAELKPDQTDQ 473 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKIT 539 ++LPPY ILDDI++ +VE + +D ETV V +L +EYKRRQAP G K+T Sbjct: 474 DTLPPYEILDDILECLVEKDLGLAAIVARGHDRETVSRVWRMLDRAEYKRRQAPPGVKVT 533 Query: 540 AKSFGRDRLYPISNKF 555 ++SFG+DR YPI++ F Sbjct: 534 SRSFGKDRRYPITSGF 549 >gi|260752640|ref|YP_003225533.1| NAD synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552003|gb|ACV74949.1| NAD+ synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 558 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 245/559 (43%), Positives = 355/559 (63%), Gaps = 10/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L I +AQ+ VG N + R+EA + +DLILF EL + GYPPEDLV K Sbjct: 3 MTDQLTILLAQIPQTVGHCRRNADAMLKIRQEAGK--VDLILFPELQLIGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +Q ++ L T DGGA ++VG Q++ + N+V +LD G I A+R K +LPNY Sbjct: 61 SLLQNAKEELERLALATSDGGAAMLVGTAWQEKGRIFNAVALLDQGKIAAIRYKHDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G +P++FRD+ LGI +CEDIW +C HLK++GAE L N SP+ Sbjct: 121 GTFDEKRIFSAGPLPEPVLFRDVSLGIPVCEDIW-TEKLCAHLKERGAEILLVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++V ++ LP +Y+N+VGGQDE++FDG SF + + + + Sbjct: 180 SGKYPVRRKVVADRVKETGLPCLYLNRVGGQDEVVFDGGSFVVNRDGAVPVSLPQWQADC 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDYVQKNNFHKVIIG 298 ++T WH ++ + D+ + + ++ Y A ++ L DYV++N F V++G Sbjct: 240 YVTHWHKTEE----GWSCDEGLQSKILEGEDGRLSDIYQAMMMGLGDYVRQNGFSGVLLG 295 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AA+AVDALG + V +MLP +YTS +SL+DA ACA+ LGC+ D +PI+ Sbjct: 296 LSGGIDSALSAAVAVDALGADKVWCVMLPSRYTSQESLDDARACAEMLGCRLDSVPINPA 355 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V +++ + I ENIQSR+RG +LMA+SN M+LTT NKSE++VGY TL Sbjct: 356 VEAIDGMLAPLFSGKKPDITEENIQSRLRGVVLMAISNKFSPMVLTTGNKSEMAVGYATL 415 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GG++ LKDLYK+ VF+++ WRNSH LGP V+P ++ K PSAELR Q Sbjct: 416 YGDMNGGYSVLKDLYKSDVFKVSRWRNSHKPAHALGPDGYVMPDRVITKPPSAELREDQK 475 Query: 479 DQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D +SLPPY ILD ++ ++E + S + + Y+ + V +E+LL+ +EYKRRQAP G K Sbjct: 476 DSDSLPPYDILDAVLHGLIEEDLSCSDLVKRGYDPDLVTRIENLLHRAEYKRRQAPPGVK 535 Query: 538 ITAKSFGRDRLYPISNKFR 556 + +++FGRDR YP+S++FR Sbjct: 536 LGSRNFGRDRRYPLSHQFR 554 >gi|241762372|ref|ZP_04760451.1| NAD+ synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373059|gb|EER62708.1| NAD+ synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 558 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 245/559 (43%), Positives = 354/559 (63%), Gaps = 10/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L I +AQ+ VG N + R+EA + +DLILF EL + GYPPEDLV K Sbjct: 3 MTDQLTILLAQIPQTVGHCRRNADAMLKIRQEAGK--VDLILFPELQLIGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +Q ++ L T DGGA ++VG Q++ + N+V +LD G I A+R K +LPNY Sbjct: 61 SLLQNAKEELERLALATSDGGAAMLVGTAWQEKGRIFNAVALLDQGKIAAIRYKHDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G +P++FRD+ LGI +CEDIW +C HLK++GAE L N SP+ Sbjct: 121 GTFDEKRIFSAGPLPEPVLFRDVSLGIPVCEDIW-TEKLCDHLKERGAEILLVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++V ++ LP +Y+N+VGGQDE++FDG SF + + + + Sbjct: 180 SGKYPVRRKVVADRVKETGLPCLYLNRVGGQDEVVFDGGSFVVNRDGAVPVSLPRWQADC 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDYVQKNNFHKVIIG 298 ++T WH ++ + D+ + ++ Y A ++ L DYV++N F V++G Sbjct: 240 YVTRWHKTEE----GWSCDEGLQSKISEGEDGRLSDIYQAMMMGLGDYVRQNGFSGVLLG 295 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AA+AVDALG + V +MLP +YTS +SL+DA ACA+ LGC+ D +PI+ Sbjct: 296 LSGGIDSALSAAVAVDALGADKVWCVMLPSRYTSQESLDDARACAEMLGCRLDSVPINPA 355 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V +++ + I ENIQSR+RG +LMA+SN M+LTT NKSE++VGY TL Sbjct: 356 VEAIDGMLAPLFSGKKPDITEENIQSRLRGVVLMAISNKFSPMVLTTGNKSEMAVGYATL 415 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GG++ LKDLYK+ VF+++ WRNSH LGP V+P ++ K PSAELR Q Sbjct: 416 YGDMNGGYSVLKDLYKSDVFKVSRWRNSHKPAHALGPDGYVMPDRVITKPPSAELREDQK 475 Query: 479 DQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D +SLPPY ILD ++ ++E + S + + Y+ + V +E+LL+ +EYKRRQAP G K Sbjct: 476 DSDSLPPYDILDAVLHGLIEEDLSCSDLVKRGYDPDLVTRIENLLHRAEYKRRQAPPGVK 535 Query: 538 ITAKSFGRDRLYPISNKFR 556 + +++FGRDR YP+S++FR Sbjct: 536 LGSRNFGRDRRYPLSHQFR 554 >gi|294010307|ref|YP_003543767.1| NAD+ synthase (glutamine-hydrolyzing) [Sphingobium japonicum UT26S] gi|292673637|dbj|BAI95155.1| NAD+ synthase (glutamine-hydrolyzing) [Sphingobium japonicum UT26S] Length = 553 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 258/561 (45%), Positives = 346/561 (61%), Gaps = 15/561 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL IA+AQ+ VGD+A N R A DLI++ EL + GYPPEDLV K Sbjct: 1 MTDKLVIALAQMTQSVGDLAANADAMLEWRTRAMEA--DLIVYPELQLIGYPPEDLVLKP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + + +D L T DGG ++VG Q + N V +L+ G + A+R K LPNY Sbjct: 59 ALVDRANHELDRLAQATADGGPAMLVGTVVASQGVLFNVVALLEDGAVTAIRQKRELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G PI FR +++G+ ICEDIW + HL+ +GAE L S N SP+ Sbjct: 119 GTFDEKRLFAPGPLPAPIDFRGVKIGVPICEDIW-FPFVTAHLRAEGAEILISPNGSPFE 177 Query: 181 HNKLKKRHEIVTG-QISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +K +R V G ++ LP++Y+N+VGGQDEL+FDGASF +G LA Q+ + E Sbjct: 178 VDKDDRRINAVAGTRVRETGLPLVYLNRVGGQDELVFDGASFVMNGDLSLAHQLPDWEEA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIG 298 +T H+++ QW + + L E AD YNA VL LRDYV KN F V++G Sbjct: 238 LVLT--HWEKWEGQWVCLPGERHV-----LDERPADIYNAMVLGLRDYVNKNRFPGVVLG 290 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AA+AVDALG + V +M+P ++TS +SL+DA CA+ LG +YD +PI Sbjct: 291 LSGGIDSALSAAVAVDALGADRVWCVMMPSRFTSRESLDDAIECARLLGVRYDSIPIEPA 350 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F ++++ + ENIQSRIRG LMALSN MLLTT NKSE+SVGY T+ Sbjct: 351 VEAFDAMLADVFTGRQRDLTEENIQSRIRGVTLMALSNKYGHMLLTTGNKSEMSVGYATI 410 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSH--GITSGLGPLTEVIPPSILEKSPSAELRPH 476 YGDM+GG++ LKD YKT VF L WRN + + GP V+P ++ K PSAELR + Sbjct: 411 YGDMAGGYSVLKDAYKTTVFDLCRWRNENVPSLGEAFGPEGPVMPDRVITKPPSAELRDN 470 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D++SLPPY +LD I+ +VE E S + ++ +TV +E LLY +EYKRRQ+P G Sbjct: 471 QKDEDSLPPYEVLDPILYGLVEEELSVEQLVARGFDKDTVARIERLLYVAEYKRRQSPPG 530 Query: 536 TKITAKSFGRDRLYPISNKFR 556 K+ ++FGRDR YPI+N FR Sbjct: 531 VKLGMRNFGRDRRYPITNAFR 551 >gi|84683380|ref|ZP_01011283.1| glutamine-dependent NAD(+) synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84668123|gb|EAQ14590.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium HTCC2654] Length = 555 Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust. Identities = 249/558 (44%), Positives = 341/558 (61%), Gaps = 8/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ +AQLNPVVGDI GN AR A A G D+++ TE F++GY P+DLV + Sbjct: 3 MADTFRLTLAQLNPVVGDIPGNADMARAAWTAAKEAGADMVMLTESFLTGYQPQDLVMRP 62 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F A + L D DG + +G P D + + N+ +L+ G + K LPN Sbjct: 63 AFWSEAMEACEALAKDVADGPV-MGIGCPYHDGKDLYNAYWVLEGGRVRRRILKQMLPNE 121 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F EKR F DPI + LGI ICED W +C++L +GAE L N SPYY Sbjct: 122 TVFDEKRLFSHAEPQDPIKIGPLTLGIPICEDAWWPDAVCENLADKGAEVLAVPNGSPYY 181 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ RH ++ ++ LP+IY+N VGGQD+ +FDGASF D Q +LAFQ + F E Sbjct: 182 RGKVETRHGVMRARVEETGLPLIYLNMVGGQDDQVFDGASFGMDAQGELAFQFREFDE-- 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ W + + L EADY V SLRDY+ K F KV++GLS Sbjct: 240 VIRHVDLEKGDDGWRIVPGEVVPA----LPAYEADYRVMVQSLRDYMGKTGFKKVLLGLS 295 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DALG ENV+ +MLP +YTS SL+DA A A+ LGC YD +PI + Sbjct: 296 GGIDSAIVATIAADALGPENVRCVMLPSEYTSQGSLDDAKAVAERLGCHYDFVPIKGPRD 355 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 356 AVTEALAPLFEGYAPDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 415 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYK +VF+ WRN++ +GP EVIP SI++K PSAELR Q D Sbjct: 416 DMAGGYNPIKDLYKMRVFETCRWRNANHRDWMMGPAGEVIPVSIIDKPPSAELRDDQKDS 475 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ +V+ E S Q ++ +TV+ VEHL++ SEYKR Q+ G ++T Sbjct: 476 DSLPPYEVLDAILEGLVDKELSVAELVAQGFDRDTVKKVEHLIFISEYKRFQSAPGARLT 535 Query: 540 AKSFGRDRLYPISNKFRD 557 +SF DR YPI N++RD Sbjct: 536 MRSFWLDRRYPIVNRWRD 553 >gi|46201454|ref|ZP_00055021.2| COG0171: NAD synthase [Magnetospirillum magnetotacticum MS-1] Length = 548 Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust. Identities = 258/552 (46%), Positives = 351/552 (63%), Gaps = 10/552 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L IA+AQ+NPVVGDI GN+ R AR EA G DL++F EL + GYPPEDLV K +F+ Sbjct: 2 LAIALAQINPVVGDIVGNMGLIRAARAEAKALGADLVVFGELTLCGYPPEDLVLKGAFLD 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A++ L ++T DG A ++VG P + ++ + N+ ++LD G I A R K +LPNY F Sbjct: 62 ACEAAVNELAAETADGPA-LLVGAPWRVKDKLHNAALLLDHGRIAATRLKHHLPNYGVFD 120 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G P+ FR +RLG+LICED+W +++ + L + GAE L N SP+ +K Sbjct: 121 EVRVFQPGPLPGPVSFRGVRLGVLICEDMW-YADVAETLGESGAEILVVPNGSPFEMDKP 179 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 KR + ++ LP++YVNQVGGQDEL+FDGASF G ++A + + Q +T Sbjct: 180 TKRLDHARARVEETGLPLVYVNQVGGQDELVFDGASFVLGGDAKIAASIAPWQSQVVLTT 239 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W ++ W + P E Y A V LRDYV KN F V++GLSGGID Sbjct: 240 WT--RESDGWRCEGPKAP-----PASRLEGVYQALVTGLRDYVGKNRFPGVVLGLSGGID 292 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIA DALG + V +M+P YTS +SLEDAA CA+ LG + D + I + F S Sbjct: 293 SAICAAIAADALGPDKVWCVMMPSPYTSEESLEDAALCAQMLGVRLDTVNIGPAMAAFGS 352 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +++ + S I EN+QSR RG LM LSN M+L+T NKSE+S GY TLYGDM G Sbjct: 353 MLAPIFEGRDSDITEENLQSRSRGLTLMGLSNKFGPMVLSTGNKSEMSCGYATLYGDMCG 412 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 G+ LKD+YKT VF L+SWRN H LGP+ V+P ++ K PSAEL+P Q DQ++LP Sbjct: 413 GYAVLKDVYKTTVFALSSWRNGHRPPGCLGPVGAVMPERVITKPPSAELKPDQKDQDTLP 472 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY LD +++ ++E E+S + + + VR V +L +EYKRRQAP G KI+++SF Sbjct: 473 PYDELDAMLEAMIEEEKSVSEIVAKGFEEAVVRRVWRMLDRAEYKRRQAPPGVKISSRSF 532 Query: 544 GRDRLYPISNKF 555 G+DR YPI+N F Sbjct: 533 GKDRRYPITNAF 544 >gi|307293500|ref|ZP_07573344.1| NAD+ synthetase [Sphingobium chlorophenolicum L-1] gi|306879651|gb|EFN10868.1| NAD+ synthetase [Sphingobium chlorophenolicum L-1] Length = 553 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 255/561 (45%), Positives = 343/561 (61%), Gaps = 15/561 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL IA+AQ+ VGD+ N R A DLI++ EL + GYPPEDLV K Sbjct: 1 MTDKLVIALAQMTQSVGDLTANADAMLEWRGRA--MDADLIVYPELQLIGYPPEDLVLKP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + + +D L T DGG ++VG Q + N V +L+ G + A+R K LPNY Sbjct: 59 ALVDRANHELDRLAQATADGGPAMLVGTVVASQGVLFNVVALLEGGAVTAIRQKRELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G PI FR +++G+ ICEDIW + HL+ +GAE L S N SP+ Sbjct: 119 GTFDEKRLFAPGPLPAPIDFRGVKIGVPICEDIW-FPFVTAHLRSEGAEILISPNGSPFE 177 Query: 181 HNKLKKRHEIVTG-QISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +K +R V G ++ LP++Y+N+VGGQDEL+FDGASF +G +A Q+ + E Sbjct: 178 VDKDDRRINAVAGTRVRETGLPLVYLNRVGGQDELVFDGASFVMNGDLSIAQQLPDWEEA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIG 298 +T W ++ QW + + L E AD YNA VL LRDYV KN F V++G Sbjct: 238 LVLTTW--EKWEGQWVCLPGERHV-----LDERPADIYNAMVLGLRDYVNKNRFPGVVLG 290 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AA+AVDALG + V +M+P ++TS +SL+DA CA+ LG +YD +PI Sbjct: 291 LSGGIDSALSAAVAVDALGADRVWCVMMPSRFTSQESLDDAVECARLLGVRYDSIPIEPA 350 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F S+++ + ENIQSRIRG LM LSN MLLTT NKSE+SVGY T+ Sbjct: 351 VEAFDSMLANVFTGRQRDLTEENIQSRIRGVTLMGLSNKYGHMLLTTGNKSEMSVGYATI 410 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSH--GITSGLGPLTEVIPPSILEKSPSAELRPH 476 YGDM+GG++ LKD YKT VF L WRN + + GP ++P ++ K PSAELR + Sbjct: 411 YGDMAGGYSVLKDAYKTTVFDLCRWRNENVPSLGEAFGPKGPIMPDRVITKPPSAELRDN 470 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D++SLPPY +LD I+ +VE E S + ++ +TV +E LLY +EYKRRQ+P G Sbjct: 471 QKDEDSLPPYEVLDPILYGLVEEELSVEQLVARGFDKDTVARIERLLYVAEYKRRQSPPG 530 Query: 536 TKITAKSFGRDRLYPISNKFR 556 K+ ++FGRDR YPI+N FR Sbjct: 531 VKLGMRNFGRDRRYPITNAFR 551 >gi|254294201|ref|YP_003060224.1| NAD+ synthetase [Hirschia baltica ATCC 49814] gi|254042732|gb|ACT59527.1| NAD+ synthetase [Hirschia baltica ATCC 49814] Length = 553 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 266/560 (47%), Positives = 348/560 (62%), Gaps = 11/560 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L I AQLN +VGD+ N+ KA A +EA+ G DL++ ELF+ GYPPEDLV K Sbjct: 1 MSDRLTILSAQLNAIVGDVDANLEKAVGALKEAHACGADLVVLPELFLCGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLP 118 + +AC A L S T G GIVVG P ++ L NSV ++ G I A+R K LP Sbjct: 61 ALSKACLRAAHELASQTRQDGPGIVVGMPVWEEGQALPYNSVALIADGEIKALRHKYELP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F EKRTF G P+ FR LG+ ICEDIW + + LK++GAE L S N SP Sbjct: 121 NYDVFDEKRTFQQGPKPLPVGFRGFTLGLPICEDIWLEA-VPDALKEKGAEILLSPNGSP 179 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + N R + + Q + + LP++YVNQVGGQDEL FDG SF D + ++ Q+ F E Sbjct: 180 WRRNVRDARLKAFS-QWADLRLPLVYVNQVGGQDELAFDGESFAIDSRGRIVQQLPDFEE 238 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 ++ W D S+ + E Y A ++ L DYV+K F V+IG Sbjct: 239 AYSVSVWERTPMGLMCVEGKKDELSS------DLEETYLATMMGLGDYVRKTGFPGVLIG 292 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSA+ AAIAVDALG ENV +M+P +YTS +SL DA CA+ALG KYD + I Sbjct: 293 LSGGIDSAMVAAIAVDALGPENVWCVMMPSRYTSRESLLDAQQCAEALGVKYDNIQISSA 352 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 VN + ++S+ ENIQSR+RG LMALSN M+ TT NKSE++VGY TL Sbjct: 353 VNAYDEMLSEAFTGTTPDTTEENIQSRVRGVTLMALSNKFGHMVTTTGNKSEMAVGYATL 412 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG+NPLKD+YKT+VF+LA WRN++ + GP VIP +I+ K PSAELR Q Sbjct: 413 YGDMCGGYNPLKDIYKTEVFELARWRNANVPKNAHGPYGIVIPENIISKPPSAELREDQK 472 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D++SLPPY ILDDI+ ++E EES + + ++ VR ++ L+ +EYKRRQAP G K Sbjct: 473 DEDSLPPYHILDDILYGLIEREESIEEIVSRGHFEDVVRRIDSLVRINEYKRRQAPPGVK 532 Query: 538 ITAKSFGRDRLYPISNKFRD 557 I K+FGR R YP+ N++RD Sbjct: 533 IGDKNFGRGRRYPLVNRYRD 552 >gi|144901045|emb|CAM77909.1| NH3-dependent NAD+ synthetase protein [Magnetospirillum gryphiswaldense MSR-1] Length = 552 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 262/557 (47%), Positives = 352/557 (63%), Gaps = 11/557 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L IA AQ+NPVVGD+AGN+A+ R AR +A G L++F EL +SGYPPEDLV K Sbjct: 1 MSDSLSIAFAQINPVVGDVAGNVARIRAARAQAAADGAQLVVFPELVVSGYPPEDLVLKS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ A A++ L +DT D G I+VG P + + N+ ++LD G + A R K +LPNY Sbjct: 61 AFLDAIEQAVEDLAADTADNGPAILVGAPWRVAGRLHNAALLLDHGRVAASRLKHHLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G PI FR +RLG+L+CED+W S++ + L + GAE L N SP+ Sbjct: 121 GVFDEARVFAPGPVPGPIQFRGVRLGVLVCEDMWY-SDVAETLAECGAEILVVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K+ R +++ LP+IYVNQ+GGQDEL+FDGASF D + ++ ++ ++EQ Sbjct: 180 LDKVGVRLSRAKERVAETGLPLIYVNQLGGQDELVFDGASFALDAKGEVMVRLPAWAEQV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 T WH +Q W S + P+ E + D Y A VL LRDYV KN F V++GL Sbjct: 240 VTTRWH--KQDGAW------SVAGPIAPIPERDEDLYQAMVLGLRDYVGKNGFPGVVLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AA+A DALG + V +M+P YTS +SL+DAA AK LGC+ D + I + Sbjct: 292 SGGIDSALAAAVAADALGADKVWCVMMPSPYTSQESLDDAAGVAKMLGCRLDNINIGPAM 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F +++ + I EN+QSR RG LMALSN M+L+T NKSE+S GY TLY Sbjct: 352 GAFDHMLAPHFAGTNADITEENLQSRARGVTLMALSNKFGPMVLSTGNKSEMSTGYATLY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GG+ LKD+YKT VF + WRN + LGP V+P ++ K PSAEL+P QTD Sbjct: 412 GDMCGGYAVLKDVYKTAVFAVCRWRNGNFPAGALGPNGPVMPERVITKPPSAELKPDQTD 471 Query: 480 QESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q++LPPY +LD I+ ++E E S + Y+D VR + +L +EYKRRQAP G KI Sbjct: 472 QDTLPPYDVLDGILSCLIEGELSVEATVAKGYDDAMVRRIWRMLDRAEYKRRQAPPGVKI 531 Query: 539 TAKSFGRDRLYPISNKF 555 T +SFG+DR YPI+N F Sbjct: 532 TGRSFGKDRRYPITNGF 548 >gi|326404377|ref|YP_004284459.1| NAD(+) synthetase [Acidiphilium multivorum AIU301] gi|325051239|dbj|BAJ81577.1| NAD(+) synthetase [Acidiphilium multivorum AIU301] Length = 554 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 267/558 (47%), Positives = 347/558 (62%), Gaps = 12/558 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L +AIAQL+ VG I N+A R AR EA R+G DL++ EL I+GYPPEDLV K Sbjct: 1 MTDTLTLAIAQLDLHVGAIDRNLAAIRAARAEAARRGADLLVTPELGIAGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ AC +A L +DT DGG G++VG P + + + N+ +LD G IIA R K LPNY Sbjct: 61 AFVAACEAAAAELAADTADGGPGVIVGLPWRAEGALHNAAFVLDGGRIIARRAKHELPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + P++FR RLG++ICED W + + + L + GAE L S+N SP+ Sbjct: 121 GVFDEKRVFAPGPAPGPVMFRGFRLGVMICEDWWLPA-VSETLAETGAELLISINGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP ++ GGQDE++FDGASF + + LA +M HF Sbjct: 180 DGKLGVRLQLALNRVVETGLPFVFAAMTGGQDEIVFDGASFALNADRSLALRMPHFRAAI 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDYVQKNNFHKVIIG 298 W + A +P + E D Y A V+ L DYV KN F VI+G Sbjct: 240 ETLVWK--------RTTTGLVAEPHVLPPEPERLDLVYRAMVMGLADYVNKNGFPGVILG 291 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AA+AVDALG V+ +M+P +YTS SLEDAAACA LG + D +PI Sbjct: 292 LSGGIDSALSAAVAVDALGPARVRAVMMPSRYTSAHSLEDAAACADLLGIRCDTVPIGGA 351 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F +++ + I ENIQSR RG ILMALSN M+LTT NKSE+SVGY TL Sbjct: 352 TEAFAAVLEPLYEGRTPDITEENIQSRARGLILMALSNKLGHMVLTTGNKSEMSVGYATL 411 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG++ LKD+YKT VF L+ WRN++ LGP V+P ++ K PSAELR +QT Sbjct: 412 YGDMCGGYSVLKDVYKTTVFALSHWRNANRPADALGPAGAVMPERVITKPPSAELRENQT 471 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD +++ +VE E+S +D TV V LL +EYKRRQAP G K Sbjct: 472 DQDSLPPYDVLDAVLEGLVEGEKSIEELVAAGHDRATVARVWKLLDRAEYKRRQAPPGVK 531 Query: 538 ITAKSFGRDRLYPISNKF 555 ITA++FGRDR YPI+N F Sbjct: 532 ITARAFGRDRRYPITNGF 549 >gi|254463160|ref|ZP_05076576.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium HTCC2083] gi|206679749|gb|EDZ44236.1| glutamine-dependent NAD(+) synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 557 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 248/556 (44%), Positives = 347/556 (62%), Gaps = 9/556 (1%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + +I + QLNP +GDIAGN AKAR A E G DL+ E+FI GY +DLV K + Sbjct: 9 RFRITLGQLNPTMGDIAGNAAKARTAWEAGRDAGADLVALPEMFILGYNSQDLVMKPAVQ 68 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +AI+ L + G A + +G P + + N+ I G I + K NLPN F Sbjct: 69 AACLAAIEALAVECAHGPA-LAIGGPAVEDGKLFNAYFICRGGKISSKSLKHNLPNEDVF 127 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F SG P + R+G ICED W + + + L++ GAEFL N SPYY K Sbjct: 128 DEVRIFDSGPLGGPYSVGNTRIGSPICEDAW-HEEVAETLEETGAEFLLVPNGSPYYRGK 186 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R + ++ LP+IY+N VGGQD+ +FDG SF + +LA QM F E ++ Sbjct: 187 FDVRMNQMVSRVVETGLPLIYLNMVGGQDDQVFDGGSFALNPGGKLAIQMPVFDE--LIS 244 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 H D + + DD T+ IP Q E+ DY CV +LRDY+ K F KV++G+SGGI Sbjct: 245 --HVDLTRTDEGWRVDDGEKTI-IPGQFEQ-DYRVCVTALRDYMSKTGFKKVLLGMSGGI 300 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A IAVDALG ENV+ +MLP +YTS SL+DA CA+ +G +Y+ +PI + + Sbjct: 301 DSALVATIAVDALGGENVRCVMLPSEYTSQGSLDDAKDCAERIGAEYNFVPISEGRDAIT 360 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + ++ + + + ENIQSR+RG +LMA+SN +MLLTT NKSE++VGY T+YGDMS Sbjct: 361 NTLAPLFEGLEADVTEENIQSRLRGLLLMAMSNKFGSMLLTTGNKSEVAVGYATIYGDMS 420 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GG+NP+KD+YK +VF++ WRN + +GP EV+PPSI++K PSAELRP Q D +SL Sbjct: 421 GGYNPIKDMYKVRVFEVCRWRNENHFEWMMGPKGEVVPPSIIDKPPSAELRPDQKDSDSL 480 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 P YP+LD I++ +V+++ S Y+ V+ +EHLLY SEYKR Q+ GT+++ ++ Sbjct: 481 PDYPVLDGILEMLVDDDASVAQCVAAGYDRAVVKKIEHLLYISEYKRFQSAPGTRLSRRA 540 Query: 543 FGRDRLYPISNKFRDH 558 F DR YPI N++RD+ Sbjct: 541 FWLDRRYPIVNRWRDN 556 >gi|148260979|ref|YP_001235106.1| NAD synthetase [Acidiphilium cryptum JF-5] gi|146402660|gb|ABQ31187.1| NH(3)-dependent NAD(+) synthetase [Acidiphilium cryptum JF-5] Length = 583 Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust. Identities = 267/558 (47%), Positives = 347/558 (62%), Gaps = 12/558 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L +AIAQL+ VG I N+A R AR EA R+G DL++ EL I+GYPPEDLV K Sbjct: 30 MTDTLTLAIAQLDLHVGAIDRNLAAIRAARAEAARRGADLLVTPELGIAGYPPEDLVLKP 89 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ AC +A L +DT DGG G++VG P + + + N+ +LD G IIA R K LPNY Sbjct: 90 AFVAACEAAAAELAADTADGGPGVIVGLPWRAEGALHNAAFVLDGGRIIARRAKHELPNY 149 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + P++FR RLG++ICED W + + + L + GAE L S+N SP+ Sbjct: 150 GVFDEKRVFAPGPAPGPVMFRGFRLGVMICEDWWLPA-VSETLAETGAELLVSINGSPFE 208 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP ++ GGQDE++FDGASF + + LA +M HF Sbjct: 209 DGKLGVRLQLALNRVVETGLPFVFAAMTGGQDEIVFDGASFALNADRSLALRMPHFRAAI 268 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDYVQKNNFHKVIIG 298 W + A +P + E D Y A V+ L DYV KN F VI+G Sbjct: 269 ETLVWK--------RTTTGLVAEPHVLPPEPERLDLVYRAMVMGLADYVNKNGFPGVILG 320 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AA+AVDALG V+ +M+P +YTS SLEDAAACA LG + D +PI Sbjct: 321 LSGGIDSALSAAVAVDALGPARVRAVMMPSRYTSAHSLEDAAACADLLGIRCDTVPIGGA 380 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F +++ + I ENIQSR RG ILMALSN M+LTT NKSE+SVGY TL Sbjct: 381 TEAFAAVLEPLYEGRTPDITEENIQSRARGLILMALSNKLGHMVLTTGNKSEMSVGYATL 440 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG++ LKD+YKT VF L+ WRN++ LGP V+P ++ K PSAELR +QT Sbjct: 441 YGDMCGGYSVLKDVYKTTVFALSHWRNANRPADALGPAGAVMPERVITKPPSAELRENQT 500 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD +++ +VE E+S +D TV V LL +EYKRRQAP G K Sbjct: 501 DQDSLPPYDVLDAVLEGLVEGEKSIEELVAAGHDRATVARVWKLLDRAEYKRRQAPPGVK 560 Query: 538 ITAKSFGRDRLYPISNKF 555 ITA++FGRDR YPI+N F Sbjct: 561 ITARAFGRDRRYPITNGF 578 >gi|332557776|ref|ZP_08412098.1| NAD synthetase [Rhodobacter sphaeroides WS8N] gi|332275488|gb|EGJ20803.1| NAD synthetase [Rhodobacter sphaeroides WS8N] Length = 554 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 253/562 (45%), Positives = 358/562 (63%), Gaps = 17/562 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+AGN A ARRA +EA G D++ TE+F++GY +DLV ++ Sbjct: 1 MTERFRLTLAQLNPTVGDLAGNAALARRAWDEARAAGSDMLALTEMFVTGYQTQDLVMRR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ + I+ L +D +G A I +G P + ++N +LD G + A K +LPN Sbjct: 61 AFVEEAMATIERLAADCAEGPA-IGIGGPCLEGGRLMNVYWVLDGGRVSARVFKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W ++++C+ L + GAE L N SPY+ Sbjct: 120 EVFDEKRVFSSGEVHGPCRVGPLRIGIPICEDSW-HADVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 179 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE----EADYNACVLSLRDYVQKNNFHKVI 296 H D + +D+ + P+ + EADY+A VLSLRDY+ K+ F +V+ Sbjct: 239 V----HVDFE------AADEGWRALPAPIVAQPDLWEADYHAMVLSLRDYLGKSGFSRVL 288 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AAIA DALG E V+ +MLP ++TS SLEDAAA A+ALGC+ D + I Sbjct: 289 LGLSGGIDSALVAAIAADALGPEAVRCVMLPSRFTSRASLEDAAAVARALGCRLDEVGIG 348 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + + GI ENIQSR+RG +LMALSN MLLTT NKSE++VGY Sbjct: 349 GPQEAVGAALGPLFEGTEPGITEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYC 408 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NP+KDLYKT+VFQ+ WRN H GP EVIPP +++K PSAELR Sbjct: 409 TIYGDMNGGYNPIKDLYKTRVFQMCRWRNGHHRPWMKGPEGEVIPPRVIDKPPSAELRED 468 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D++SLPPY LD I++ +V+ EES + + ETV +E L+ GSE+KR Q+ G Sbjct: 469 QKDEDSLPPYATLDAILEGLVDREESVAELVARGFERETVARIERLILGSEWKRFQSAPG 528 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 T++T ++F DR YP+ N++RD Sbjct: 529 TRLTRRAFWLDRRYPMVNRWRD 550 >gi|126461777|ref|YP_001042891.1| NAD synthetase [Rhodobacter sphaeroides ATCC 17029] gi|126103441|gb|ABN76119.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 554 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 251/562 (44%), Positives = 358/562 (63%), Gaps = 17/562 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+AGN A ARRA +EA G D++ TE+F++GY +DLV ++ Sbjct: 1 MTERFRLTLAQLNPTVGDLAGNAALARRAWDEARAAGSDMLALTEMFVTGYQTQDLVMRR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ + I+ L +D +G A I +G P + ++N+ +L+ G + A K +LPN Sbjct: 61 AFVEEAMATIERLAADCAEGPA-IGIGGPCLEDGRLMNAYWVLEGGRVSARVFKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W + ++C+ L + GAE L N SPY+ Sbjct: 120 EVFDEKRVFASGEVHGPCRVGPLRIGIPICEDSW-HPDVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 179 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE----EADYNACVLSLRDYVQKNNFHKVI 296 H D + +D+ + P+ + EADY+A VLSLRDY+ K+ F +V+ Sbjct: 239 V----HVDFE------ATDEGWRALPAPIVAQPDLWEADYHAMVLSLRDYLGKSGFSRVL 288 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AAIA DALG E V+ +MLP ++TS SLEDAAA A+ALGC+ D + I Sbjct: 289 LGLSGGIDSALVAAIAADALGPEAVRCVMLPSRFTSQASLEDAAAVARALGCRLDEVGIG 348 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + + G+ ENIQSR+RG +LMALSN MLLTT NKSE++VGY Sbjct: 349 GPQEAVGAALGPLFEGTEPGVTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYC 408 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NP+KDLYKT+VFQ+ WRN H GP EVIPP +++K PSAELR Sbjct: 409 TIYGDMNGGYNPIKDLYKTRVFQMCRWRNGHHCPWMKGPEGEVIPPRVIDKPPSAELRED 468 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D++SLPPY LD I++ +V+ EES + + ETV +E L+ GSE+KR Q+ G Sbjct: 469 QKDEDSLPPYATLDAILEGLVDREESVAELVARGFERETVARIERLILGSEWKRFQSAPG 528 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 T++T ++F DR YP+ N++RD Sbjct: 529 TRLTRRAFWLDRRYPMVNRWRD 550 >gi|221638758|ref|YP_002525020.1| NAD synthetase [Rhodobacter sphaeroides KD131] gi|221159539|gb|ACM00519.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides KD131] Length = 564 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 252/562 (44%), Positives = 359/562 (63%), Gaps = 17/562 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+AGN A ARRA +EA G D++ TE+F++GY +DLV ++ Sbjct: 11 MTERFRLTLAQLNPTVGDLAGNAALARRAWDEARAAGSDMLALTEMFVTGYQTQDLVMRR 70 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ I+ L +D +G A I +G P + ++N+ +L+ G + A K +LPN Sbjct: 71 AFVEEAMVTIERLAADCAEGPA-IGIGGPCLEDGRLMNAYWVLEGGRVSARVFKHHLPNA 129 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W ++++C+ L + GAE L N SPY+ Sbjct: 130 EVFDEKRVFSSGEVHGPCRVGPLRIGIPICEDSW-HADVCETLAETGAEILLVPNGSPYH 188 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 189 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 248 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE----EADYNACVLSLRDYVQKNNFHKVI 296 H D + +D+ + P+ + EADY+A VLSLRDY++K+ F +V+ Sbjct: 249 V----HVDFE------ATDEGWRALPAPIVAQPDLWEADYHAMVLSLRDYLRKSGFSRVL 298 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AAIA DALG E V+ +MLP ++TS SLEDAAA A+ALGC+ D + I Sbjct: 299 LGLSGGIDSALVAAIAADALGPEAVRCVMLPSRFTSRPSLEDAAAVARALGCRLDEVGIG 358 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + + GI ENIQSR+RG +LMALSN MLLTT NKSE++VGY Sbjct: 359 GPQEAVGAALGPLFEGTEPGITEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYC 418 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NP+KDLYKT+VFQ+ WRN H GP EVIPP +++K PSAELR Sbjct: 419 TIYGDMNGGYNPIKDLYKTRVFQMCRWRNGHHRPWMKGPPGEVIPPRVIDKPPSAELRED 478 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D++SLPPY LD I++ +V+ EES + + ETV +E L+ GSE+KR Q+ G Sbjct: 479 QKDEDSLPPYATLDAILEGLVDREESVAELVARGFERETVARIERLILGSEWKRFQSAPG 538 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 T++T ++F DR YP+ N++RD Sbjct: 539 TRLTRRAFWLDRRYPMVNRWRD 560 >gi|146277632|ref|YP_001167791.1| NAD synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145555873|gb|ABP70486.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 554 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 251/563 (44%), Positives = 359/563 (63%), Gaps = 17/563 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+A N+A AR+A E A G D++ TE+F++GY +DLV ++ Sbjct: 1 MTERFRLTLAQLNPTVGDLAANVALARKAWEAARAAGSDMVALTEMFVTGYQTQDLVMRR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ +AI+ L +D +G A I +G P + + ++N +L+ G + A K +LPN Sbjct: 61 AFVRDAMAAIERLAADCAEGPA-IGIGGPCLEGDRLMNGYWLLEGGRVTATVFKHHLPNG 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W + ++C+ L + GAE L N SPY+ Sbjct: 120 EVFDEKRLFSSGEVHGPCRVGPLRIGIPICEDSW-HPDVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 179 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE----EADYNACVLSLRDYVQKNNFHKVI 296 H D + +D+ + P+ + EADY+A V+ LRDY+ K+ F +V+ Sbjct: 239 V----HVDFE------ATDEGWRALPAPIVAQPDLWEADYHAMVVGLRDYLGKSGFSRVL 288 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AAIA DALG E V+ +MLP +YTS SLEDAAA A+ALGC+ D + I Sbjct: 289 LGLSGGIDSALVAAIAADALGPEAVRCVMLPSRYTSRHSLEDAAAVARALGCRLDEVGIE 348 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + + GI ENIQSR+RG +LMALSN MLLTT NKSE++VGY Sbjct: 349 GPQEAVGAALGPLFEGTAPGITEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYC 408 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GGFNP+KDLYKT+VFQ+ WRN+H GP EVIPP +++K PSAELR Sbjct: 409 TIYGDMNGGFNPIKDLYKTRVFQMCRWRNAHHRPWMKGPAGEVIPPRVIDKPPSAELREG 468 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D++SLPPY LD I++ +V+ EES + ++ ETV VE L++ SE+KR Q+ G Sbjct: 469 QKDEDSLPPYATLDAILEGLVDREESAAELVARGFDRETVTKVERLIFLSEWKRFQSAPG 528 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 T++T ++F DR YP+ N++RD Sbjct: 529 TRLTRRAFWLDRRYPMVNRWRDE 551 >gi|56695341|ref|YP_165689.1| NAD synthetase [Ruegeria pomeroyi DSS-3] gi|56677078|gb|AAV93744.1| glutamine-dependent NAD(+) synthetase [Ruegeria pomeroyi DSS-3] Length = 552 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 248/559 (44%), Positives = 345/559 (61%), Gaps = 11/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I +AQLNP VGD+AGN AKAR A E G DL+ E+F++GY +DLV K Sbjct: 1 MADRFRITLAQLNPTVGDLAGNAAKARMAWEHGREAGADLVALPEMFVTGYNTQDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F A + I+ L + DG A + +G P ++ + N+ +IL G I++ K +LPN Sbjct: 61 VFHDAAIAMIEALAEECADGPA-LAIGGPLVEEGKLYNAYLILKGGKIVSRSLKTHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRIFDAGPLGGPYSVGNTRIGSPICEDAW-HEDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R + ++ LP+IY+N VGGQD+ +FDG +F + LAF+M F E Sbjct: 179 RDKYDMRINQMVARVVETGLPLIYLNMVGGQDDQVFDGGTFGLNPGGALAFRMPVFDEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGL 299 +T ++ W + + A PL + E DY V SLRDY++K F KV++GL Sbjct: 238 -ITHVDLERGSEGWQIVQGEVA-----PLPDAWEQDYRVMVESLRDYMRKTGFAKVLLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGG+DSAL AAIA DALG ENV+ +MLP +YTS SL+DA A A+ALG +YD +PI + Sbjct: 292 SGGVDSALVAAIATDALGPENVRCVMLPSEYTSRSSLDDAEAVAQALGVRYDYVPISESR 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + ++ G+ ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+Y Sbjct: 352 AAVTNTLAPLFAGTEPGLTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI PS+++K PSAELR Q D Sbjct: 412 GDMAGGYNPIKDLYKTRVFETCRWRNANHRLWMMGPAGEVIRPSVIDKPPSAELREDQKD 471 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLP YP LD I+ +V+ + S + ++ + R VEHL+Y SEYKR QA G ++ Sbjct: 472 SDSLPDYPELDAILDILVDQDGSIADCVAAGFDRDVARRVEHLIYISEYKRYQAAPGARL 531 Query: 539 TAKSFGRDRLYPISNKFRD 557 T ++F DR YPI N++RD Sbjct: 532 TPRAFWLDRRYPIVNRWRD 550 >gi|260431460|ref|ZP_05785431.1| glutamine-dependent NAD(+) synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260415288|gb|EEX08547.1| glutamine-dependent NAD(+) synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 570 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 255/561 (45%), Positives = 342/561 (60%), Gaps = 13/561 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I +AQLNP+VGDIAGN AKAR A E+ G DL+ E+FI+GY +DLV K Sbjct: 19 MADHFRITLAQLNPIVGDIAGNAAKARSAWEQGRAAGADLVALPEMFITGYNTQDLVQKP 78 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA A+ L +D DG A + +G P + + + N+ +IL+ G I++ K +LPN Sbjct: 79 VFHQAAMDAVRQLATDCADGPA-LAIGGPWAEGDKLYNAYLILNQGRIVSKVFKHHLPNE 137 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L + GAEFL N SPY+ Sbjct: 138 TVFDEVRLFDAGPLGGPYAVGNTRVGSPICEDGW-HEDVAETLAETGAEFLLIPNGSPYF 196 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R + ++ LP+IY+N VGGQD+ +FDG SF + LAF+M F E Sbjct: 197 RNKYDIRLNQMVARVVETGLPVIYLNMVGGQDDQVFDGGSFGLNPGGALAFRMPVFDEAV 256 Query: 241 FMTEWHYDQQLSQ--WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 H D Q + W + A E DY A V +LRDY+ K F K ++G Sbjct: 257 T----HVDLQRGEQGWTIVPGAVAEQP----DAWEQDYRAMVQALRDYMAKTGFSKALLG 308 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGG+DSAL A IAVDALG ENV+ +MLP +YTS SLEDA A AKALG +YD +PI Sbjct: 309 LSGGVDSALVATIAVDALGAENVRCVMLPSEYTSAASLEDAEAVAKALGVQYDYVPISQS 368 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 ++ + I ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+ Sbjct: 369 RAAVTETLAPLFAGRRADITEENIQSRLRGLLLMAISNKFGEMLLTTGNKSEVAVGYATI 428 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GG+NP+KDLYKT+VF+ WRN++ GP EVI PS+++K PSAELR Q Sbjct: 429 YGDMNGGYNPIKDLYKTRVFETCRWRNANHRDWMKGPAGEVIRPSVIDKPPSAELREDQK 488 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTK 537 D +SLP YP+LD I++ +V+ + S + DE R VEHL+Y SEYKR Q+ GT+ Sbjct: 489 DSDSLPDYPVLDGILEILVDRDGSIADCVAAGFDEADARRVEHLIYISEYKRFQSAPGTR 548 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T ++F DR YPI N++RD Sbjct: 549 LTNRAFWLDRRYPIVNRWRDR 569 >gi|77462885|ref|YP_352389.1| NAD synthetase [Rhodobacter sphaeroides 2.4.1] gi|77387303|gb|ABA78488.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides 2.4.1] Length = 554 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 251/562 (44%), Positives = 357/562 (63%), Gaps = 17/562 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+AGN A ARRA +EA G D++ TE+F++GY +DLV ++ Sbjct: 1 MTERFRLTLAQLNPTVGDLAGNAALARRAWDEARAAGSDMLALTEMFVTGYQTQDLVLRR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ + I+ L +D +G A I +G P + ++N+ +L+ G + A K +LPN Sbjct: 61 AFVEEAMATIERLAADCAEGPA-IGIGGPCLEDGRLMNAYWVLEGGRVSARVFKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W + ++C+ L + GAE L N SPY+ Sbjct: 120 EVFDEKRVFSSGEVHGPCRVGPLRIGIPICEDSW-HPDVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 179 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE----EADYNACVLSLRDYVQKNNFHKVI 296 H D + +D+ + P+ + EADY+A VLSLRDY+ K+ F +V+ Sbjct: 239 V----HVDFE------AADEGWRALPAPIVAQPDLWEADYHAMVLSLRDYLGKSGFSRVL 288 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AAIA DALG E V+ +MLP ++TS SLEDAAA A+ALGC+ D + I Sbjct: 289 LGLSGGIDSALVAAIAADALGPEAVRCVMLPSRFTSQASLEDAAAVARALGCRLDEVGIG 348 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + + GI ENIQSR+RG +LMALSN MLLTT NKSE++VGY Sbjct: 349 GPQEAVGAALGPLFEGTEPGITEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYC 408 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NP+KDLYKT+VFQ+ WRN H GP EVIPP +++K PSAELR Sbjct: 409 TIYGDMNGGYNPIKDLYKTRVFQMCRWRNGHHRPWMKGPEGEVIPPRVIDKPPSAELRED 468 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D++SLPPY LD I++ +V+ EE + + ETV +E L+ GSE+KR Q+ G Sbjct: 469 QKDEDSLPPYATLDAILEGLVDREEGVAELVARGFERETVARIERLILGSEWKRFQSAPG 528 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 T++T ++F DR YP+ N++RD Sbjct: 529 TRLTRRAFWLDRRYPMVNRWRD 550 >gi|83310332|ref|YP_420596.1| NAD synthetase [Magnetospirillum magneticum AMB-1] gi|82945173|dbj|BAE50037.1| Glutamine-dependent NAD(+) synthetase [Magnetospirillum magneticum AMB-1] Length = 551 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 256/556 (46%), Positives = 345/556 (62%), Gaps = 10/556 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L IA+AQ+NPVVGDIAGN+A R AR EA G DL++F EL + GYPPEDLV K Sbjct: 1 MSDTLSIALAQINPVVGDIAGNMALIRAARAEAQVLGADLVVFGELTLCGYPPEDLVLKG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ A A + +GG ++VG P + ++ + N+ ++LD G + A R K +LPNY Sbjct: 61 AFLDA-CEAAVEELAAETEGGPALLVGAPWRVKDRLHNAALLLDHGRVAATRLKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G + P+ FR +RLGI+ICED+W +++ + L + GAE L N SPY Sbjct: 120 GVFDEIRVFQPGPAPGPVSFRGVRLGIMICEDMWY-ADVAETLGESGAEILVVPNGSPYE 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K KR + ++ LP+IYVNQVGGQDEL+FDGASF D A + + Q Sbjct: 179 MDKPTKRLDHARARVEETGLPLIYVNQVGGQDELVFDGASFVLDSDGATAASIAPWQSQV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T W + D + P+ E Y A V LRDYV KN F V++GLS Sbjct: 239 ILTRWTRGSG----GWRCDGPKAP---PVSRLEGVYQALVTGLRDYVGKNRFPGVVLGLS 291 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+CAAIA DALG + V +M+P YTS +SLEDAA CA+ LG + D + I + Sbjct: 292 GGIDSAICAAIAADALGPDKVWCVMMPSPYTSEESLEDAAECARLLGVRLDTVNIGPAMG 351 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++++ + + I EN+QSR RG LM +SN M+L+T NKSE+S GY TLYG Sbjct: 352 AFETMLAPLFAGKDADITEENLQSRSRGLTLMGISNKFGPMVLSTGNKSEMSCGYATLYG 411 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+ LKD+YKT VF L+SWRN LGP V+P ++ K PSAEL+P Q DQ Sbjct: 412 DMCGGYAVLKDVYKTTVFALSSWRNGQRPPGCLGPQGRVMPDRVITKPPSAELKPDQKDQ 471 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 ++LPPY LD +++ ++E+E+S Y++ VR V +L +EYKRRQAP G KIT Sbjct: 472 DTLPPYDELDAMLEAMIEDEKSVAEIVAAGYDEAVVRRVWRMLDRAEYKRRQAPPGVKIT 531 Query: 540 AKSFGRDRLYPISNKF 555 ++SFG+DR YPI+N F Sbjct: 532 SRSFGKDRRYPITNAF 547 >gi|114762129|ref|ZP_01441597.1| NAD(+) synthase [Pelagibaca bermudensis HTCC2601] gi|114545153|gb|EAU48156.1| NAD(+) synthase [Roseovarius sp. HTCC2601] Length = 552 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 241/558 (43%), Positives = 344/558 (61%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ IAQLNP +GD+AGN A+A+ A E+A G D++ E+FI+GY +DL K Sbjct: 1 MADRFRLTIAQLNPTMGDLAGNAAQAKDAWEQAKAAGADMVALPEMFIAGYNAQDLPMKH 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F C +A+ L D DG + + +G P + + N+ +I G ++ K +LPNY Sbjct: 61 AFTLDCMAAVKALAEDCADGPS-LGIGCPWVEGTELYNAYIICRGGKMVTQVFKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F SG P + R+G ICED W ++ + L + GAEFL N SPY+ Sbjct: 120 NVFDELRIFDSGPIGGPYAVGNTRIGSPICEDAWYE-DVAETLAETGAEFLLVPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK + R + ++ LP+IY+N VGGQD+ IFDG SF + +A Q+ F E Sbjct: 179 RNKYETRLNKMIARVVETGLPLIYLNMVGGQDDQIFDGGSFVLNPHGAVALQLPVFEEAI 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 H D + ++ + + + T + E+ DY+A VL+LRDY +K F KV++G+S Sbjct: 239 A----HVDLERTEDGWRALEGDFTTHPDAMEQ--DYHAMVLALRDYCRKTGFGKVLLGMS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A IAVDALG ENV+ +MLP +YTS SLEDA ACA+ LGC YD +PI + Sbjct: 293 GGVDSALVATIAVDALGAENVRCVMLPSEYTSEHSLEDAKACAENLGCHYDFVPITPGRD 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITETLAPLFEGRDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DMSGG+NP+KDLYKT+VF + WRN++ +GP IP I+ K PSAELR Q D Sbjct: 413 DMSGGYNPIKDLYKTRVFDICRWRNANARPWMMGPEAAPIPERIITKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I++ +V+++ S + Y+ + VEHLLY SEYKR Q+ G +++ Sbjct: 473 DSLPDYPVLDGILQILVDDDGSIADCVAAGYDRADAKKVEHLLYISEYKRFQSAPGARLS 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N++RD Sbjct: 533 KRAFWLDRRYPIVNRWRD 550 >gi|260428890|ref|ZP_05782867.1| glutamine-dependent NAD(+) synthetase [Citreicella sp. SE45] gi|260419513|gb|EEX12766.1| glutamine-dependent NAD(+) synthetase [Citreicella sp. SE45] Length = 552 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 245/559 (43%), Positives = 337/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ IAQLNPV+GD+AGN A+AR A E+ G D++ E+FI+GY P+DL K Sbjct: 1 MADRFRLTIAQLNPVLGDLAGNAAQARDAWEQGKAAGADMVALPEMFIAGYSPQDLPSKN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F C +A+ L D DG + +G P + + N+ VI G I K +LPNY Sbjct: 61 AFTLDCMAAVRQLAEDCADGPT-LAIGTPWVEGTELYNAYVICRGGKITTQVFKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R + SG P + R+G +CED W ++ + L + GAEFL N SPY+ Sbjct: 120 EVFDELRIYDSGPIGGPYAVGNTRVGSPVCEDAWYE-DVAETLAETGAEFLLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K + R + ++ LP+IYVN GGQD+ IFDG SF + Q+A Q+ F E Sbjct: 179 RDKYETRLNKMVARVIETGLPLIYVNMTGGQDDQIFDGGSFVLNPHGQVAVQLPVFEE-- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + S W + D E DYNA V++LRDY +K F KV++GLS Sbjct: 237 VVAHVDLGRTESGWRALEGDFTRHP----DSMEQDYNAMVVALRDYCRKTGFGKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A IAVDALG NV+ +MLP +YTS SLEDA ACA+ALGC YD +PI + Sbjct: 293 GGIDSALVATIAVDALGAGNVRCVMLPSEYTSEHSLEDAKACAEALGCHYDFVPITPGRD 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITATLAPLFEGLKPDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF + WRN++ GP IP I+ K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFDICRWRNANHRGWMSGPGAAPIPERIITKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I+K +V+++ S + Y+ + VEHLLY SEYKR Q+ G +++ Sbjct: 473 DSLPDYPVLDGILKILVDDDGSIADCVAAGYDRADAKKVEHLLYISEYKRFQSAPGARLS 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD+ Sbjct: 533 KRAFWLDRRYPIVNRWRDN 551 >gi|84499552|ref|ZP_00997840.1| NAD(+) synthase [Oceanicola batsensis HTCC2597] gi|84392696|gb|EAQ04907.1| NAD(+) synthase [Oceanicola batsensis HTCC2597] Length = 552 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 249/558 (44%), Positives = 335/558 (60%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + QLNP VGDIAGN A AR+A E G DL+ E+F++GY +DLV K Sbjct: 1 MTDRFRITLCQLNPTVGDIAGNAALARQAWETGKAAGADLVALPEMFVTGYQTQDLVGKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA +AI+TL +D DG A + +G P + + N IL G +I+ K NLPN Sbjct: 61 VFHQAALAAIETLAADCADGPA-LAIGGPALEGASLFNGYHILSGGRVISRILKHNLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + S P +R+G ICED W +S + + L + GAE L N SPYY Sbjct: 120 TVFDEVRLYGSAAPAGPYSIGGVRIGSPICEDAW-HSEVPETLAETGAEILLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ R+ + ++ LP+IY+N GGQD+ +FDG SF + ++AF M F +Q Sbjct: 179 RGKMETRYNHMVARVVETGLPLIYLNMTGGQDDQVFDGGSFGLNPGGRMAFHMPVFDQQ- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T + W D +P E E DY V +LRDY +K F KV++GLS Sbjct: 238 -ITHVDLTRTPEGWRI---DEGEKAAMP-DEWEQDYRCMVEALRDYCRKTGFGKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DALG ENV+ +MLP +YTS SLEDA A A+ALGC+Y LPI Sbjct: 293 GGIDSAIVATIAADALGPENVRCVMLPSEYTSDHSLEDARAVARALGCRYHDLPISQGRQ 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AITETLAPLFEGTDPDVTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVIP I+ K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFEQCRWRNANHRDWMMGPPGEVIPDRIITKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I+ +V+ + S + Y E + VE L+Y SEYKR Q+ GT++T Sbjct: 473 DSLPDYPVLDAILNILVDLDGSVADCVAAGYRREDAKQVERLIYLSEYKRFQSAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 +F DR YPI N++RD Sbjct: 533 KHAFWLDRRYPIVNRWRD 550 >gi|56479437|ref|YP_161026.1| NAD synthetase [Aromatoleum aromaticum EbN1] gi|56315480|emb|CAI10125.1| Glutamine-dependent NAD+ synthetase [Aromatoleum aromaticum EbN1] Length = 538 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 243/559 (43%), Positives = 347/559 (62%), Gaps = 23/559 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L IA+AQLN VGD+ N + RA ++A G DL+L EL +SGYPPEDL+ + Sbjct: 1 MDKTLAIAVAQLNFTVGDLTANADRIIRALDQARAAGADLLLTPELALSGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F +ACS + + H G +V+G P + ++ N+ ++ G ++A K LPNY Sbjct: 61 DFYRACSREVARIA--LHTDGITLVLGHPEERRDWRYNAASVIRDGEVLATYHKHLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F G ++LG+ IC D+W+ S + ++ +GAE L LNASPY+ Sbjct: 119 EVFDEERYFDRGLDACVFELNGVKLGVNICADLWE-SGPAELVRAEGAELLLGLNASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NKL +R+E++ G+++ LP++Y N VGGQDEL+FDGASF D Q+ +Q F E+ Sbjct: 178 MNKLARRYEVLRGRVADTGLPVVYCNMVGGQDELVFDGASFALDADGQVRYQAASFEER- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + H+ + +W A P++EE Y A +RDY+ KN F IIGLS Sbjct: 237 -LDVLHF--RGGRWEPGEIVPAR----PIEEEV--YEALKTGVRDYLGKNGFPGAIIGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL IAVDALG E V+ +M+P YT+ SL+D+ A LG +YD +PI +N Sbjct: 288 GGIDSALTLCIAVDALGPERVRAVMMPSPYTAQMSLDDSRALVANLGVRYDEIPIEPAMN 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F L+++ + P+ EN+QSRIRG ILMALSN + A++LTT NKSE++ GY TLYG Sbjct: 348 TFADLLARQFEGLPADTTEENLQSRIRGMILMALSNKTGAIVLTTGNKSEMATGYATLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKDLYKT VF+L+ WRN+ ++ V+P +I+ + PSAEL+P QTDQ Sbjct: 408 DMAGGFAVLKDLYKTFVFRLSRWRNT---------VSPVMPENIITRPPSAELKPDQTDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD II+ +E +ES + + + VR +L +EYKRRQ+PVG ++T Sbjct: 459 DSLPPYDVLDAIIEAYMERDESPREIIARGFPEADVRRTVAMLKRNEYKRRQSPVGIRVT 518 Query: 540 AKSFGRDRLYPISNKFRDH 558 + FGRD YPI+++++D Sbjct: 519 RRGFGRDWRYPITSRYQDE 537 >gi|149915731|ref|ZP_01904256.1| NAD(+) synthase [Roseobacter sp. AzwK-3b] gi|149810313|gb|EDM70158.1| NAD(+) synthase [Roseobacter sp. AzwK-3b] Length = 552 Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust. Identities = 245/561 (43%), Positives = 340/561 (60%), Gaps = 15/561 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ +AQ NP +GD+ GN ARRA G +L+ E+FI+GY +DLV K Sbjct: 1 MADSFRLTLAQWNPTMGDLDGNADLARRAWRTGREAGANLVALPEMFITGYNTQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPN 119 +F A +AI++L D DG A + +G P Q+GVL N+ IL G I + K +LPN Sbjct: 61 AFHTAAIAAIESLARDCADGPA-LAIGGPAL-QDGVLYNAYYILQEGRIASRVFKHHLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + F EKR + +G P +R+G ICED W ++ + L + GA+ L N SPY Sbjct: 119 ETVFDEKRIYAAGAVTGPYAVDGLRIGSPICEDSWYE-DVAETLAETGAQILLVPNGSPY 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 Y KL RH+I+ ++ LP+IY+N VGGQD+ +FDG SF + LA QM E Sbjct: 178 YRQKLSHRHQIMVARVIETGLPLIYLNLVGGQDDQVFDGGSFALNPGGALALQMPLMQEA 237 Query: 240 NFMTEWHYDQQLSQ--WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 H D ++ W D A +P E DY+A VLSLRDY++K F KV++ Sbjct: 238 TA----HLDLTRTEDGWRITPSDLAP---VP-DAMEQDYHAMVLSLRDYLRKTGFRKVLL 289 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL A +AVDALG ENV+ +MLP YTS SL+DA A+ LGC+YD +PI + Sbjct: 290 GLSGGIDSALVACVAVDALGPENVRCVMLPSDYTSQASLDDAETLARTLGCRYDTVPIAE 349 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 ++ + I ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T Sbjct: 350 GRQAITRTLAPLFEGTAPDITEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYAT 409 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM+GG+NPLKD+YKT+VF WRN+ +GP+ VIP ++++ PSAEL P Q Sbjct: 410 IYGDMAGGYNPLKDMYKTRVFDTCRWRNTVHRDWMMGPVGAVIPQRVIDRPPSAELAPDQ 469 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 D++SLP Y +LD I++ +V+ + S + ++ VEHLLY SEYKR Q+ GT Sbjct: 470 RDEDSLPAYSVLDGILEILVDQDGSIADCVAAGFDRADASRVEHLLYISEYKRFQSAPGT 529 Query: 537 KITAKSFGRDRLYPISNKFRD 557 +++ ++F DR YPI+N++RD Sbjct: 530 RLSKRAFWLDRRYPIANRWRD 550 >gi|163743987|ref|ZP_02151356.1| NAD synthetase [Phaeobacter gallaeciensis 2.10] gi|161382747|gb|EDQ07147.1| NAD synthetase [Phaeobacter gallaeciensis 2.10] Length = 552 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 246/558 (44%), Positives = 341/558 (61%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN KAR A G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRVTLAQLNPTVGDLAGNANKAREAWAAGRDAGADLVALPEMFITGYNTQDLVQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA + ++ L +D DG A + VG P + N+ +IL G I K +LPN Sbjct: 61 VFHQAAIAEVERLAADCADGPA-LAVGSPWVADGKLFNAYLILKGGKITTQVLKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W ++ + L + GAEFL N SPY+ Sbjct: 120 TVFDEVRIFDAGPLGGPYAVGNTRIGSPICEDGWY-EDVAETLAETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK+ R + + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMDVRFNHMVARAVETDLPVIYLNMVGGQDDQVFDGGSFVLNPGGALALQMPVFDE-- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 H D + + + + D A +P E E DY+ LSLRDY++K F KV++GLS Sbjct: 237 --AIQHLDLERTAEGWRAVDGAKAS-LP-DEWEQDYHVMTLSLRDYMRKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ A IAVDALG ENV+ +MLP +YTS +SL+DA A AKALG YD +PI + Sbjct: 293 GGVDSAIVATIAVDALGAENVRCVMLPSEYTSQESLDDAEAVAKALGVHYDYVPIAEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ G+ ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFAGLDEGLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI P++++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPEGEVIRPNVIDKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD +++ +V+ + S + ++ E + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDALLEILVDRDGSIADCVAAGFSRENAKRVEHLIYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N++RD Sbjct: 533 PRAFWLDRRYPIVNRWRD 550 >gi|310816658|ref|YP_003964622.1| glutamine-dependent NAD(+) synthetase [Ketogulonicigenium vulgare Y25] gi|308755393|gb|ADO43322.1| glutamine-dependent NAD(+) synthetase [Ketogulonicigenium vulgare Y25] Length = 554 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 247/559 (44%), Positives = 346/559 (61%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNPVVGDI N A+ARR +A G D I+ E+F+ GY +DLV + Sbjct: 1 MGETFRLTLAQLNPVVGDIEANAARARRVFHDARAAGSDFIVLPEMFLIGYQAQDLVLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++A+ L DT DGG + +G P ++ + + N+ IL G + A+ K LPNY Sbjct: 61 AFQRDAAAALAQLARDT-DGGPALGIGLPWREGDELFNAYAILSGGKVQAMVRKHELPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E+R F +G + P+ F R+G+ ICED W ++ + + + GAE L N SPY Sbjct: 120 GVFDERRYFAAGPISGPVAFEGGPRIGLPICEDAW-FPDVAEAMAESGAEILVVPNGSPY 178 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R + + +++ LP++Y+N VGGQD+ +FDG SF LA Q+ F+E Sbjct: 179 SRGKYDVRVQRMVSRVTENDLPLVYLNMVGGQDDQVFDGGSFVLGHGGGLAAQLPFFTE- 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 T H D + ++ ++P E DY A +LRDYV+K+ F +V++GL Sbjct: 238 ---TVSHIDFTRCETGGWQPQRSTLAHVP-DEHALDYQAMTTALRDYVRKSGFSRVLLGL 293 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AAIAVDALG ENV+ +MLP +YTS SLEDA CA+ALG K D + I V Sbjct: 294 SGGIDSALVAAIAVDALGAENVRGVMLPSRYTSDHSLEDAEVCARALGIKLDTVEIAGPV 353 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + ++ + + ENIQSR+RG +LMA SN MLLTT NKSE+ VGY T+Y Sbjct: 354 AAAEAALAPLFAGHDADLTEENIQSRMRGLLLMAQSNKFGEMLLTTGNKSEMCVGYATIY 413 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KDLYKT+VF +A+WRN++ GP EVIP I+ K PSAELRP Q D Sbjct: 414 GDMNGGYNPIKDLYKTRVFAVAAWRNANHFDWMAGPAGEVIPTRIITKPPSAELRPDQKD 473 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLPPYP+LD I+ +V+ + S + YN ETV+ VEHL+ SEYKR Q+ G K+ Sbjct: 474 EDSLPPYPVLDAILDLMVDRDASVADCVAAGYNRETVKRVEHLVAISEYKRFQSAPGVKL 533 Query: 539 TAKSFGRDRLYPISNKFRD 557 + ++ DR YPI N++RD Sbjct: 534 SRRALWLDRRYPIVNRWRD 552 >gi|254477369|ref|ZP_05090755.1| glutamine-dependent NAD(+) synthetase [Ruegeria sp. R11] gi|214031612|gb|EEB72447.1| glutamine-dependent NAD(+) synthetase [Ruegeria sp. R11] Length = 554 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 247/558 (44%), Positives = 342/558 (61%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGDIAGN KAR A G DL+ E+FI+GY +DL+ K Sbjct: 1 MADRFRVTLAQLNPTVGDIAGNADKARAAWAAGKEAGADLVALPEMFITGYNTQDLIQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q+ + ++ L +D DG A + +G P + N+ +IL G I A K +LPN Sbjct: 61 IFHQSAIAEVERLAADCADGPA-LAIGSPWVRDGNLYNAYLILQGGKISAQVLKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F SG P +R+G ICED W ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRLFQSGPLGGPYAVGGVRIGSPICEDGWYE-DVAETLAETGAEFLLIPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R ++ + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMEVRQNLMVARTVETGLPVIYLNMVGGQDDQVFDGGSFVLNPGGALALQMPVFDEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ W + + AS +P E DY +LRDY++K F KV++GLS Sbjct: 238 -IQHLDLERTPDGWRAVEGEKAS---LP-DAWEQDYQVMTYALRDYMRKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AAIAVDALG ENV+ +MLP +YTS SL+DA A AKALG YD +PI + Sbjct: 293 GGVDSALVAAIAVDALGAENVRCVMLPSEYTSQGSLDDAEAVAKALGVHYDYVPISEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ G+ ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFAGLEEGLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI PS+++K PSAELR Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNANHRPWMMGPEGEVIRPSVIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD +++ +V+ E S + ++ E + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDALLEMLVDQEASIADCVAAGFDREVAKRVEHLIYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI+N++RD Sbjct: 533 PRAFWLDRRYPIANRWRD 550 >gi|163736854|ref|ZP_02144272.1| NAD+ synthetase [Phaeobacter gallaeciensis BS107] gi|161389458|gb|EDQ13809.1| NAD+ synthetase [Phaeobacter gallaeciensis BS107] Length = 552 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 245/558 (43%), Positives = 339/558 (60%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN KAR A G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRVTLAQLNPTVGDLAGNANKAREAWAAGRDAGADLVALPEMFITGYNTQDLVQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA + ++ L +D DG A + VG P + N+ +IL G I K +LPN Sbjct: 61 VFHQAAIAEVERLAADCADGPA-LAVGSPWVADGKLFNAYLILKGGKITTQVLKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W ++ + L + GAEFL N SPY+ Sbjct: 120 TVFDEVRIFDAGPLGGPYAVGNTRIGSPICEDGWY-EDVAETLAETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK+ R + + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMDVRFNHMVARAVETDLPVIYLNMVGGQDDQVFDGGSFVLNPGGALALQMPVFDEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ W + AS +P E E DY+ LSLRDY++K F KV++GLS Sbjct: 238 -IQHLDLERTAEGWRAVEGPKAS---LP-DEWEQDYHVMTLSLRDYMRKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ A IAVDALG ENV+ +MLP +YTS +SL+DA A AKALG YD +PI + Sbjct: 293 GGVDSAIVATIAVDALGAENVRCVMLPSEYTSQESLDDAEAVAKALGVHYDYVPIAEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ G+ ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFAGLDEGLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN + +GP EVI P++++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNDNHRDWMMGPEGEVIRPNVIDKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD +++ +V+ + S + ++ E + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDALLEILVDRDGSIADCVAAGFSRENAKRVEHLIYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N++RD Sbjct: 533 PRAFWLDRRYPIVNRWRD 550 >gi|103488420|ref|YP_617981.1| NAD synthetase [Sphingopyxis alaskensis RB2256] gi|98978497|gb|ABF54648.1| NH(3)-dependent NAD(+) synthetase [Sphingopyxis alaskensis RB2256] Length = 556 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 252/562 (44%), Positives = 350/562 (62%), Gaps = 25/562 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L I ++Q+ VGD+A N R R A + DLIL+ EL + GYPPEDLV K + + Sbjct: 8 LTIVLSQMTQAVGDLAANADAMRSVR--ARHRDADLILYPELQLIGYPPEDLVLKPALAE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 ++ + L +DT DGG ++VG +D +G L N V +LD G ++AVR K LPNY F Sbjct: 66 RAATLLAELAADTADGGPAMLVGSVERDADGSLYNIVALLDGGRVVAVRRKHELPNYGTF 125 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F G D + +R ++LG+ ICED W + HL QGAE L S+N SPY +K Sbjct: 126 DEKRVFAPGPLPDIVEWRGVKLGLPICEDGWL-PKVSAHLAAQGAELLISVNGSPYEIDK 184 Query: 184 LKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 ++R ++ +++ LP+I++N++GGQDEL+FDG SF +G A ++ Sbjct: 185 DERRLSQVFARRVAETGLPLIFLNRIGGQDELVFDGCSFVLNGDGTAAHRL--------- 235 Query: 243 TEWHYDQQLSQWN-----YMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVI 296 T+W ++++++W + D A + + AD Y+A +LSLRDYV +N F V+ Sbjct: 236 TDWEAEERVTRWTKGAAGWACDAGAIAEW---EAHPADIYSAMILSLRDYVTRNRFPGVV 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSA+CAAIA DALG + V +MLP ++TS SL+DAA CA+ +GC+ D +PI Sbjct: 293 LGLSGGIDSAICAAIAADALGPDKVWCVMLPSRFTSQASLDDAAGCARMIGCRLDTIPIV 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 V F +++ + I EN+QSRIRG LMALSN MLLTT NKSE+SVGY Sbjct: 353 PAVEAFDQMLAGSFADAEVDITEENVQSRIRGVTLMALSNKFGPMLLTTGNKSEMSVGYA 412 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NPLKD YK VF LA WRN H P+ V+P +I+ K PSAELRP Sbjct: 413 TIYGDMAGGYNPLKDAYKMTVFALAKWRNEHVPRLSRNPVAPVMPDTIITKPPSAELRPD 472 Query: 477 QTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 Q DQ+SLPPY LD ++ +VE E + ++ + V +E LL +EYKRRQAP Sbjct: 473 QKDQDSLPPYEDLDRMLHMLVEEEAGVDDVVARHGFDRDAVARIERLLAIAEYKRRQAPP 532 Query: 535 GTKITAKSFGRDRLYPISNKFR 556 G K++ ++FGRDR YPI++ FR Sbjct: 533 GVKLSTRNFGRDRRYPITHGFR 554 >gi|254466900|ref|ZP_05080311.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium Y4I] gi|206687808|gb|EDZ48290.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium Y4I] Length = 552 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 253/558 (45%), Positives = 351/558 (62%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN AKAR A EE + G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRVTLAQLNPTVGDLAGNAAKARTAWEEGRKAGADLVALPEMFITGYNTQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA + ++ L +D DG A + VG P + + N+ +IL G I + K +LPN Sbjct: 61 VFHQAAIAEVEKLAADCADGPA-LAVGGPWVEGGRLYNAYLILKDGKIASRSLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L + GAEFL N SPY+ Sbjct: 120 TVFDEVRLFEAGPLGGPYSVSNTRIGSPICEDGW-HEDVAETLAETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R ++ + HLP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMEVRFNMMVARAVETHLPVIYLNMVGGQDDQVFDGGSFALNPGGALAVQMPLFDE-- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T+ + W + A ++P E E DY V SLRDY+ K F KV++GLS Sbjct: 237 CITQVDLIRTGDGWRVEEGEKA---HLP-DEWEQDYRVMVDSLRDYMGKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDALG ENV+ +MLP +YTS +SL+DA A AKALG +YD +PI + Sbjct: 293 GGVDSAIVAAIAVDALGAENVRCVMLPSEYTSRESLDDAEAVAKALGVRYDYVPISEARA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 S ++ + I ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITSTLAPLFAGLDADITEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ GP EVI P++++K PSAELR +Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNANHRPWMKGPAGEVIRPNVIDKPPSAELRENQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I++ +V+ E S + ++ + + VEHLLY SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDAILEILVDLEGSIADCVAAGFSRDVAKRVEHLLYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N++RD Sbjct: 533 PRAFWLDRRYPIVNRWRD 550 >gi|83953407|ref|ZP_00962129.1| NAD(+) synthase [Sulfitobacter sp. NAS-14.1] gi|83842375|gb|EAP81543.1| NAD(+) synthase [Sulfitobacter sp. NAS-14.1] Length = 552 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 243/558 (43%), Positives = 336/558 (60%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + QLNP VGD+AGN AR A + G DL+ E+F++GY +DLV K+ Sbjct: 1 MTSRFRITLGQLNPTVGDLAGNADLAREAWAQGKEAGADLVALPEMFLAGYNAQDLVMKQ 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++ L +D DG A + +G P + + N+ +IL G I + K NLPN Sbjct: 61 AFQLDVMTHLEALAADCADGPA-LAIGAPWVEGAKLYNAYLILRNGKIASRVFKHNLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F S P D R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRIFDSAPLGGPYAVGDTRIGSPICEDAW-HPDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ LP+IY+N VGGQD+ +FDGASF + +LAFQM F Q Sbjct: 179 RGKFETRLNHMVARVVETELPLIYLNMVGGQDDQVFDGASFALNPGGKLAFQMPAFDAQ- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +Q W + + A ++P + E DY V LRDY+ K F KV++GLS Sbjct: 238 -IAHVDLEQTPEGWRVVEGEKA---HMP-SDLEQDYRVMVQGLRDYMGKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IAVDALG +NV+ +MLP +YTS SL+DA A AKALGC+YD +PI Sbjct: 293 GGIDSAIVATIAVDALGADNVRCVMLPSEYTSQASLDDAEAVAKALGCRYDYVPIAQGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITDTLAPLFEGTKPDLTEENIQSRLRGLLLMAVSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KD+YKT+VF WRN + GP EVI P I++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDMYKTRVFDSCRWRNENHRDWMKGPEGEVIAPRIIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD ++ +V+++ S + ++ E + VEHLLY SEYKR Q+ G ++T Sbjct: 473 DSLPDYPDLDAMLTILVDDDGSIADCVAAGFDREVAKKVEHLLYISEYKRFQSAPGPRLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 +F DR YPI N++RD Sbjct: 533 KGAFWLDRRYPIVNRWRD 550 >gi|119383605|ref|YP_914661.1| NAD synthetase [Paracoccus denitrificans PD1222] gi|119373372|gb|ABL68965.1| NH(3)-dependent NAD(+) synthetase [Paracoccus denitrificans PD1222] Length = 556 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 248/564 (43%), Positives = 333/564 (59%), Gaps = 13/564 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I + QLNP VGD+ GN A AR A +A G +L+ E+FI+GY +DLV K Sbjct: 1 MTDTFRITLGQLNPTVGDLPGNAAMAREAWAKAREAGANLLALPEMFITGYQTQDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q + I L D DG A I +G P +++ + N+ IL+ G + A K LP+ Sbjct: 61 GFTQEAMAHIVDLARDCADGPA-IGIGGPYAEEDRLYNAYWILNGGRVAARVRKHELPHK 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G + P +R+G ICED W +C+ L + GAE L N SPY+ Sbjct: 120 QLFDEWRLFNVGPISGPYSLDGLRIGSPICEDAWW-PEVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF----DGQQQLAFQMKHF 236 NKL R + ++ LP+IY+N VGGQD+ I+DGASF DG Q+ F Sbjct: 179 RNKLDLRMGHMVARVVETGLPLIYLNSVGGQDDQIYDGASFVLNPGEDGGVVKVMQLAPF 238 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + W + M E E DY A L LRDY++K+ F KV+ Sbjct: 239 DE--MLAHVDFTRTPQGWRA----APGRMDHQPDEWEQDYRAMTLGLRDYMRKSGFRKVV 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL A IA DA+G ENV+ +MLP +YTS SL+DAA CA LG + D + I Sbjct: 293 LGLSGGIDSALVATIASDAVGPENVRCVMLPSEYTSQASLDDAADCAGRLGTRLDTVHIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + ++ + ENIQSR+RG +LMALSN +LLTT NKSE++VGY Sbjct: 353 GARDAVGDALAHLMAGTQPDATEENIQSRLRGVMLMALSNKFGELLLTTGNKSEVAVGYA 412 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NP+KDLYKT+VFQ WRN + LG EVIPP I+ K PSAELRP+ Sbjct: 413 TIYGDMAGGYNPIKDLYKTRVFQTCRWRNENHRDWMLGRAGEVIPPQIISKPPSAELRPN 472 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q DQ+SLPPY +LD I++ +VE + + + Q + ETV+ VE LLYGSE+KR QA G Sbjct: 473 QKDQDSLPPYEVLDAILEGLVEKDLALKDLVAQGFEPETVKKVETLLYGSEWKRYQAAPG 532 Query: 536 TKITAKSFGRDRLYPISNKFRDHI 559 +I+ K+F DR YP+ N++RD + Sbjct: 533 PRISTKAFWLDRRYPLVNRWRDRL 556 >gi|83944365|ref|ZP_00956820.1| NAD(+) synthase [Sulfitobacter sp. EE-36] gi|83844909|gb|EAP82791.1| NAD(+) synthase [Sulfitobacter sp. EE-36] Length = 552 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 242/558 (43%), Positives = 337/558 (60%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + QLNP VGD+AGN AR A + G DL+ E+F++GY +DLV K+ Sbjct: 1 MTSRFRITLGQLNPTVGDLAGNADLAREAWAQGKEAGADLVALPEMFLAGYNAQDLVMKQ 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++ L +D DG A + +G P + + N+ +IL G I + K NLPN Sbjct: 61 AFQLDVMTHLEALAADCADGPA-LAIGAPWVEGAKLYNAYLILRNGKIASRVFKHNLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F S P D R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRIFDSAPLGGPYAVGDTRIGSPICEDAW-HPDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ LP+IY+N VGGQD+ +FDGASF + +LAFQM F Q Sbjct: 179 RGKFETRLNHMVARVVETELPLIYLNMVGGQDDQVFDGASFALNPGGKLAFQMPAFDAQ- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +Q W + + A ++P + E DY V LRDY+ K F KV++GLS Sbjct: 238 -IAHVDLEQTPEGWRVVEGEKA---HMP-SDLEQDYRVMVQGLRDYMGKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IAVDALG +NV+ +MLP +YTS SL+DA + AKALGC+YD +PI Sbjct: 293 GGIDSAIVATIAVDALGADNVRCVMLPSEYTSQASLDDAESVAKALGCRYDYVPIAQGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFDGTKPDLTEENIQSRLRGLLLMAVSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KD+YKT+VF WRN + +GP EVI P I++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDMYKTRVFDSCRWRNENHRDWMMGPEGEVIAPRIIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD ++ +V+++ S + ++ E + VEHLLY SEYKR Q+ G ++T Sbjct: 473 DSLPDYPDLDAMLTILVDDDGSIADCVAAGFDREVAKKVEHLLYISEYKRFQSAPGPRLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 +F DR YPI N++RD Sbjct: 533 KGAFWLDRRYPIVNRWRD 550 >gi|149201961|ref|ZP_01878935.1| NAD synthetase [Roseovarius sp. TM1035] gi|149145009|gb|EDM33038.1| NAD synthetase [Roseovarius sp. TM1035] Length = 555 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 245/558 (43%), Positives = 346/558 (62%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN AR A ++ G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRLTLAQLNPTVGDLAGNARLARDAWDKGRAAGADLVALPEMFITGYNTQDLVQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F QA +AI+ L D DG A + +G P D + N+ IL G++ A K +LPN Sbjct: 61 AFHQAAIAAIEALARDCADGPA-LAIGGPALDGVSLHNAYYILQGGSVRARVLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + SG P +R+G ICED W + ++ + L + GAE L N SP+Y Sbjct: 120 TVFDEVRLYDSGPVAGPYTVAGVRIGSPICEDAW-HEDVAETLAETGAEILLVPNGSPHY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K+ R ++ ++ LP+IY+N VGGQD+ +FDG SF + LA Q+ F E Sbjct: 179 RDKMDLRQNMMVARVIETGLPLIYLNMVGGQDDQMFDGGSFVLNPGGALAVQLPMFQEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ W + D A ++P + E DY A VLSLRDY++K+ F KV++GLS Sbjct: 238 -VAHVDLERGPEGWRALPGDLA---HLP-DDMEQDYTAMVLSLRDYLRKSGFSKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ A IAVDA+G ENV+ +MLP +YTS +SLEDA A A+ LGC+YD +PI Sbjct: 293 GGVDSAIVATIAVDAVGAENVRCVMLPSEYTSAESLEDAKAVAENLGCRYDFVPIDAGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + EN+QSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AITATLAPLFDGRAPDLTEENLQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF++ WRN+ LGP VIP ++ K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFEICRWRNAQYRGWMLGPKGAVIPEQVISKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I++ +V+ + S + Y+ + VEHLLY SEYKR QA GT+++ Sbjct: 473 DSLPDYPVLDGILEILVDQDGSISDCVAAGYDLADAKRVEHLLYISEYKRFQAAPGTRLS 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N++RD Sbjct: 533 KRAFWLDRRYPIVNRWRD 550 >gi|85703661|ref|ZP_01034765.1| NAD(+) synthase [Roseovarius sp. 217] gi|85672589|gb|EAQ27446.1| NAD(+) synthase [Roseovarius sp. 217] Length = 555 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 240/562 (42%), Positives = 341/562 (60%), Gaps = 9/562 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN AR A +E G DL+ E+FI+GY +DLV K Sbjct: 1 MGDRFRLTLAQLNPTVGDLAGNARMARAAWQEGRAAGADLVALPEMFITGYNTQDLVRKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + QA + I+ L D +G A + +G P D G+ N+ +L G + A K +LPN Sbjct: 61 ALHQAAIATIEALARDCAEGPA-LAIGGPALDGVGLFNAYYVLQGGAVRARVLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + SG P +R+G ICED W + ++ + L + GAE L N SP+Y Sbjct: 120 TVFDEVRLYESGPVAGPYTVAGVRIGSPICEDAW-HEDVAETLAETGAEILLVPNGSPHY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK+ R ++ ++ LP+IY+N VGGQD+ +FDG SF + LA Q+ F E Sbjct: 179 RNKMDLRQNMMVARVIETGLPLIYLNMVGGQDDQMFDGGSFVLNPGGALAVQLPMFQEAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 H D + + + ++P + E DY A VLSLRDY++K+ KV++GLS Sbjct: 239 V----HVDLERGPEGWRAAPGV-LAHLP-DDLEQDYTAMVLSLRDYLRKSGLSKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ A IAVDA+G +NV+ +MLP ++TSP+SLEDA A A+ LGC+YD +PI Sbjct: 293 GGVDSAIVATIAVDAVGAKNVRCVMLPSEFTSPESLEDAKAVAENLGCRYDFVPIDAGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AITATLAPLFDGIEPDLTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT++F++ WRN+ +G VIP +++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRLFEICRWRNAQHRDWMMGGAGVVIPARVIDKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I+ +V+ + S + Y + VEHLLY SEYKR QA GT+++ Sbjct: 473 DSLPDYPVLDGILDILVDQDGSISDCVAAGYTLGDAKRVEHLLYISEYKRFQAAPGTRLS 532 Query: 540 AKSFGRDRLYPISNKFRDHISE 561 ++F DR YPI N++RD E Sbjct: 533 HRAFWLDRRYPIVNRWRDGSGE 554 >gi|284006754|emb|CBA72011.1| glutamine-dependent NAD( ) synthetase [Arsenophonus nasoniae] Length = 540 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 246/556 (44%), Positives = 345/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + + QG DLILF+EL ++GYPPEDL+F+ Sbjct: 1 MNRTLNIALAQLNWLVGDIEGNCERMLQEAKAQQLQGADLILFSELSLTGYPPEDLLFRS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q CS +D LK + + IVVG P Q E N++ G ++A K LPNY Sbjct: 61 DFHQRCSKQLDRLKEASQN--IAIVVGHPWQQNEKCYNALSFFWQGQMVARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + F+ +LG LICED+W + + +K GA+ L +NASPY Sbjct: 119 GVFDEKRYFYAGHESCVLSFKGYKLGFLICEDVWFDEPV-DRIKALGADVLIIINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ HLPI+Y+NQVGGQDELIFDG S F+GQ ++ + F+EQ Sbjct: 178 REKLHIRTRLLKSHSQRTHLPIVYLNQVGGQDELIFDGGSKVFNGQGEITHYLAQFAEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++ + L N ++ +ST + Y A V++ RDY+ KN F VI+GLS Sbjct: 238 IQCKFNDGEPLPVAN-LAKTLSSTAQV--------YEALVMATRDYINKNGFSGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+NVQ +M+P+KYT+ S+ DA A LG ++ ++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDNVQAVMMPFKYTAEISIHDAREQATLLGIEFAIVSIEAMYD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + +S + EN+Q+R R ILMA+SN S ++LTTSNKSE +VGY +LYG Sbjct: 349 AFMAGLSPLFADMAPDTTEENLQARCRAIILMAISNKSGRLVLTTSNKSESAVGYTSLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKD+ KT VF+LA +RN+ ++ IP ++E+ P+AEL P Q DQ Sbjct: 409 DMAGGFAVLKDVPKTLVFELAKYRNT---------ISPNIPQRVIERPPTAELAPGQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYP+LD I++ VE ++S DE TVR V L+ +EYKRRQAP+G +IT Sbjct: 460 DSLPPYPVLDAILEGYVEQDKSVSELVAAGFDEVTVRKVIKLVDINEYKRRQAPIGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 ++F +DR YPI++ F Sbjct: 520 IRNFNKDRRYPITSAF 535 >gi|238796754|ref|ZP_04640260.1| NAD+ synthase [Yersinia mollaretii ATCC 43969] gi|238719485|gb|EEQ11295.1| NAD+ synthase [Yersinia mollaretii ATCC 43969] Length = 540 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 238/556 (42%), Positives = 348/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLNEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P ++ + N++ + G ++A K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQH--IAVLVGHPWREAGHLYNALSLFSEGKLLARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + +D RLG+LICED+W + + K GAE L S+NASPY Sbjct: 119 GVFDEKRYFSAGHESCVVALKDYRLGLLICEDLWFDGPV-DAAKAAGAEVLLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD L ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKAFDAAGNLTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + QL++ + + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLL------QLNECEVVPMMAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFANTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + DET VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|83592026|ref|YP_425778.1| NAD synthetase [Rhodospirillum rubrum ATCC 11170] gi|83574940|gb|ABC21491.1| NH(3)-dependent NAD(+) synthetase [Rhodospirillum rubrum ATCC 11170] Length = 558 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 253/558 (45%), Positives = 343/558 (61%), Gaps = 14/558 (2%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++L +A+ Q+NP VGD++GN+ + R AR EA R G +L+L TEL ++GYPPEDLV + SF Sbjct: 8 ERLTLALCQINPWVGDLSGNLERLRAARAEAARLGAELVLATELALTGYPPEDLVLRDSF 67 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + TL +DT DGG G++VG P R + G N+ ++LD G I + K +LPNY Sbjct: 68 MAQAREVVATLAADTADGGPGVIVGVPWRSEAGGRHNAALLLDNGAIAGMVFKHHLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F G P++FR RLG++ICED+W ++ L GAE L N SP+ Sbjct: 128 VFDEKRVFDPGPKPAPLIFRGWRLGVMICEDMW-FPDVAAALVAGGAEILLVPNGSPFDL 186 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ-N 240 K + R + +++ LP++YVNQV GQDEL+FDGASF G L + + E + Sbjct: 187 EKTEARLDHARARVTESGLPLVYVNQVCGQDELVFDGASFVMGGDGALRMTVAPWREAVS 246 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 + D ++ D+ + P AD Y A VL LRDYV KN F VI+GL Sbjct: 247 PVVFTRKDGRV--------DTPAQPIPPPPPVAADIYQAMVLGLRDYVTKNGFPGVILGL 298 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AA+AVDALG E V +M+P YTS +SLEDAAACA+ LG + D + I + Sbjct: 299 SGGIDSALSAAVAVDALGAERVWCVMMPSPYTSAESLEDAAACARLLGTRLDTIDIGPAM 358 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F +++ + I EN+QSR RG LMALSN M+L+T NKSE+SVGY TLY Sbjct: 359 AAFGAMLEPHFAGRAADITEENLQSRARGLTLMALSNKFGPMVLSTGNKSEMSVGYATLY 418 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GG++ LKD+YKT VF ++ WRN++ LGP V+P ++ K+PSAELRP Q D Sbjct: 419 GDMCGGYSVLKDVYKTAVFAVSRWRNANHPEGALGPEGPVMPERVITKAPSAELRPDQKD 478 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQEYN--DETVRYVEHLLYGSEYKRRQAPVGTK 537 ++SLPPY LD ++ ++E + E V V LL +EYKRRQAP G K Sbjct: 479 EDSLPPYVDLDRVLHLLIEEQRGIAAATAESGLPRPLVERVWTLLQRAEYKRRQAPPGVK 538 Query: 538 ITAKSFGRDRLYPISNKF 555 I+A +FGRDR YPI++ + Sbjct: 539 ISALAFGRDRRYPITHAY 556 >gi|83949870|ref|ZP_00958603.1| NAD(+) synthase [Roseovarius nubinhibens ISM] gi|83837769|gb|EAP77065.1| NAD(+) synthase [Roseovarius nubinhibens ISM] Length = 552 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/559 (43%), Positives = 338/559 (60%), Gaps = 11/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLN VGDI GN KARRA +E G DL+ E+FI+GY +DLV K Sbjct: 1 MSDRFRLTLAQLNATVGDIEGNAEKARRAWQEGRDAGADLVALPEMFITGYNTQDLVRKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q +AID L D DG A + +G P + + N+ IL G + K +LPN Sbjct: 61 VFHQHAIAAIDQLARDCADGPA-LAIGGPWLEGAELHNAYHILQGGQVSRRVLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + S P +R+G ICED W + ++ + L++ GAE L N SPYY Sbjct: 120 TVFDEVRLYGSAPIGGPYAVDGLRIGSPICEDAW-HEDVTETLEETGAELLLIPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R ++ ++ LP++Y+N VG QD+ +FDG SF + +LA QM F E Sbjct: 179 RNKMETRQNLMVSRVIETGLPLVYLNLVGAQDDQVFDGGSFVLNPGGELALQMPLFQEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGL 299 + + W D A PL + E DYNA VLSLRDY+ K F KV++GL Sbjct: 238 -IAHLDLVDTGAGWRAEKGDLA-----PLPDAWEQDYNAMVLSLRDYMGKTGFKKVLLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ A IA DA+G +NV+ +MLP +YTS SL+DA A A+ LGC YD +PI Sbjct: 292 SGGIDSAIVATIAADAIGADNVRCVMLPSEYTSQASLDDAKALAENLGCSYDFVPISQSR 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+Y Sbjct: 352 QAVTETLAPLFEGHAPDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KDLYKT+VF+ WRN++ +GP VIP +I+ K PSAELR Q D Sbjct: 412 GDMAGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPAGAVIPENIITKPPSAELRDDQKD 471 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLP YP+LD I++ +V+ + S + + ++ + + VEHL+Y SEYKR Q+ GT++ Sbjct: 472 SDSLPDYPVLDAILEILVDQDGSIEDCVRAGFDRDVAKRVEHLIYISEYKRFQSAPGTRL 531 Query: 539 TAKSFGRDRLYPISNKFRD 557 T +F DR YPI N++RD Sbjct: 532 TKGAFWLDRRYPIVNRWRD 550 >gi|238897451|ref|YP_002923128.1| NAD synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465206|gb|ACQ66980.1| NAD synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 538 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 240/556 (43%), Positives = 341/556 (61%), Gaps = 23/556 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN VGDI GN +E Q DL+LF+EL +SGYPPED +F+ Sbjct: 1 MSRSLSIALAQLNFCVGDIKGNTELILNVLQEQKNQA-DLVLFSELALSGYPPEDWLFRD 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F +C + + L+ +H+ ++G P ++++ + N++ + G ++A K LPN+ Sbjct: 60 DFYHSCETQLLRLQKASHE--VSFLLGHPFREKDRLYNALSVFSEGKLLARYYKQCLPNH 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F SG + + F+ RLG+LICED+W + K GAE L S+NASPY Sbjct: 118 GVFDEARYFSSGKTTQILAFKGYRLGLLICEDLWHEGPV-DSAKAAGAEILLSINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K ++R +++ LP+IY+NQVGGQDELIFDG S + + ++ FSE+ Sbjct: 177 QKKYQRRQNMLSQHCLRTDLPLIYLNQVGGQDELIFDGRSQVLNKTGETVLELPAFSEKT 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + EW + + S P + +Y A V++LRDYVQKN F V++GLS Sbjct: 237 LLCEWTETRI---------KTKSLKVNPPEPFAEEYQALVMALRDYVQKNGFQGVLMGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK V+ M+P +YT S+ A AK LG +++L I + Sbjct: 288 GGIDSALTLAIAVDALGKSKVRAYMMPSRYTPSDSVMYAQTQAKHLGVTFEILSIEPIFE 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S + L+E+ I EN+Q+R RG +LM LSN ++LTTSNKSE +VGY TLYG Sbjct: 348 AFLSSLKGLLKEDLKDITKENLQARCRGMLLMGLSNQLGDLVLTTSNKSETAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF LA +RN+ L+EVIP ++ + PSAEL+P+Q D Sbjct: 408 DMAGGFNVLKDVPKTWVFSLAKYRNT---------LSEVIPKKVISRPPSAELKPNQLDT 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE + S ++ +E + +E VR+V L+ +EYKRRQ+PVG +IT Sbjct: 459 DSLPPYAILDAILEGYVERDRSVVSLIEEGFEEEVVRHVISLVDRNEYKRRQSPVGPRIT 518 Query: 540 AKSFGRDRLYPISNKF 555 A++F +DR YPI++ F Sbjct: 519 ARNFSKDRRYPITSGF 534 >gi|307825849|ref|ZP_07656065.1| NAD+ synthetase [Methylobacter tundripaludum SV96] gi|307733157|gb|EFO04018.1| NAD+ synthetase [Methylobacter tundripaludum SV96] Length = 536 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 240/554 (43%), Positives = 334/554 (60%), Gaps = 24/554 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 LKIA+AQ N +VGDIA N+ RA A + G D+++F EL I+GYP EDL+ + FI Sbjct: 3 LKIALAQTNFLVGDIAANVDNIARAAIHARDELGADMVVFPELTITGYPAEDLLLRADFI 62 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A ++A+ L G +VVGFP D + + NS +L G I+A K LPNY F Sbjct: 63 TAANNALYQLADRV--AGIALVVGFPEHDGDKLYNSAAVLHQGAILACYRKRALPNYGVF 120 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F +G F +G+ ICED+W+ I + K+ GAE L +LNASP+ K Sbjct: 121 DEQRYFTAGSQPCVFEFNGTFIGLTICEDVWRQ-GIIEDNKQAGAELLLTLNASPFNSGK 179 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 + +R I+ Q+ +P++YVNQ+GGQDELIFDGASF D + F+ F EQ + Sbjct: 180 IHQREAIICSQVKAAQIPLVYVNQIGGQDELIFDGASFVVDADGGIVFRAAEFKEQISVV 239 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 E+ ++ + +T E ++Y A VL ++DYV+KN F I+GLSGGI Sbjct: 240 EFDGNKPVK----------TTCAPSYNEVSSEYQALVLGIKDYVRKNGFQGAILGLSGGI 289 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A+AVDALG + V+ ++LP +YT S EDA A+ALG K+ ++PI VN F Sbjct: 290 DSALVLALAVDALGADKVEAVLLPSRYTQDMSNEDAMLEAEALGVKHHIIPIEPAVNAFT 349 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 +++ ENIQ+R RG +LMALSN +LLTT NKSE+SVGY TLYGDMS Sbjct: 350 GMLADIFAGTAKDATEENIQARCRGVVLMALSNKQGKLLLTTGNKSEMSVGYATLYGDMS 409 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF P+KD+ K ++QLA +RNS L+ IP ++ + PSAEL P Q D +SL Sbjct: 410 GGFAPIKDVPKLLIYQLAHYRNS---------LSPAIPERVITRPPSAELAPDQVDADSL 460 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD I++R +E ++S + E V L+ +EYKRRQ+P G +ITA++ Sbjct: 461 PPYDVLDPILERYIEKDQSAAEIIAAGFRREDVARAISLVDRNEYKRRQSPPGIRITARA 520 Query: 543 FGRDRLYPISNKFR 556 FGRDR YPI++ ++ Sbjct: 521 FGRDRRYPITSGYK 534 >gi|110678543|ref|YP_681550.1| NAD synthetase [Roseobacter denitrificans OCh 114] gi|109454659|gb|ABG30864.1| glutamine-dependent NAD(+) synthetase [Roseobacter denitrificans OCh 114] Length = 552 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/559 (43%), Positives = 333/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + Q+NP VGD+AGN A AR E G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRITLGQMNPTVGDLAGNAALAREVWEAGKTAGADLVALPEMFITGYNAQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + +D L D DG + +G P + + N+ +IL G I++ K +LPN Sbjct: 61 AFQLDVARHVDRLAQDCADGPT-LAIGAPWVEGTRLYNAYLILKGGKIVSQVLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRIFDAGPLGGPYSVGNSRVGSPICEDAW-HEDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ LP+IY+N VGGQD+ +FDGASF + LA Q+ F E Sbjct: 179 RGKFDTRLNHMVARVIETELPLIYLNMVGGQDDQVFDGASFGLNPGGNLAVQLPVFDEAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + Q W + + A + P E DY V +LRDY +K F KV++GLS Sbjct: 239 AHVDLERGPQ--GWRIVEGEKA---HHP-DAWEQDYRVMVQALRDYCRKTGFGKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AAIAVDALG +NV+ +MLP +YTS +SLEDA A AKALGC YD +PI + Sbjct: 293 GGVDSALVAAIAVDALGAQNVRCVMLPSEYTSAESLEDAEAVAKALGCHYDYVPITEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AIEQTLAPLFEGRGADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN GP EVI P +++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNKTHRDWMKGPQGEVITPRVIDKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD +++ +V+ S + +D ET R +EHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDRLLEILVDRNGSIEDCVAAGSDVETARKIEHLIYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 +F DR YPI N++RD Sbjct: 533 KGAFWLDRRYPIVNRWRDR 551 >gi|320539255|ref|ZP_08038925.1| putative NAD+ synthetase [Serratia symbiotica str. Tucson] gi|320030647|gb|EFW12656.1| putative NAD+ synthetase [Serratia symbiotica str. Tucson] Length = 540 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 239/556 (42%), Positives = 348/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + +E G DLI+FTEL + GYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNLLVGDIEGNTERMLQIAQEQQEAGADLIMFTELALCGYPPEDLLYRN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C++ + L+ D I+VG P ++ + + N++ + G ++ K LPNY Sbjct: 61 DFYQRCAAQLQRLQQAASD--VAILVGHPWREGDKLYNALSLFAEGRLLTRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + RLG+LICED+W + K GAE + S+NASPY+ Sbjct: 119 GVFDEKRYFHAGSETCVVELKGYRLGLLICEDLWFPEPM-DAAKAAGAELILSINASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 + K R+ ++ G HLP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 YEKPYIRNTLMVGHCQRTHLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFTEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E++ + + + + +T L + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 AQLEFN------ELDVVPMSAPATQLPQLAQV---YAALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK++VQ +M+P++YT+ S+ DA A+ LG ++D++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDSVQALMMPFRYTADISIADAKEEAEILGVEFDIVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG ILMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFIGQLSPMFAGTERDTTEENLQARCRGVILMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN ++ VIP ++E+ PSAEL P Q+DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNG---------VSYVIPQRVIERPPSAELAPDQSDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + E DE VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEGDKSVADLVAEGFDEAIVRQVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|114797585|ref|YP_761267.1| glutamine-dependent NAD(+) synthetase [Hyphomonas neptunium ATCC 15444] gi|114737759|gb|ABI75884.1| glutamine-dependent NAD(+) synthetase [Hyphomonas neptunium ATCC 15444] Length = 555 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 258/561 (45%), Positives = 345/561 (61%), Gaps = 14/561 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L+I AQLNPVVGDI GN+A AR A EA +G L++ +E F+ GYP EDLV K Sbjct: 4 MSNNLRILAAQLNPVVGDIKGNLALAREAYGEARAKGAHLLVLSEHFLLGYPAEDLVLKP 63 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S ++ A+ L +T DG A I++G P ++ + NS L G I A DK LPNY Sbjct: 64 SAVEQSMDAVRALAQETKDGPA-ILIGTPWSEEGRLYNSACFLGGGLIKARYDKRELPNY 122 Query: 121 SEFHEKRTFISGYSNDPIV--FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F EKR + G P+V +R+G+ ICEDIW + + GAE L NASP Sbjct: 123 GVFDEKRHYTPG-EGPPLVVELHGVRVGVAICEDIWLE-RVPRATHAAGAELLIVPNASP 180 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ-QLAFQMKHFS 237 + +R + + + LP ++VNQ+GGQDEL+FDGASF +G + + F Sbjct: 181 WRRAIQAERANAFD-RWADLKLPYLFVNQMGGQDELVFDGASFATNGTHGERCGLVGQFE 239 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 + E +D Q++ + A+ L+ A+Y A + L DYV+KN F V++ Sbjct: 240 TGTALVE--FDPSTKQFSGLGQSCAAD----LEGWPAEYRAAMQGLGDYVRKNRFPGVVL 293 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 G+SGGIDSA+ AAIA DALG + V +M+P KYTS SLEDA ACA+ALGC+YD + IH Sbjct: 294 GMSGGIDSAITAAIAADALGPDKVWCVMMPSKYTSNDSLEDAKACAQALGCRYDTINIHP 353 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 V +++ + + I ENIQSR+R LMALSN M++TT NKSE++VGY T Sbjct: 354 GVEALDTMLGDVFAGKKADITEENIQSRLRAVTLMALSNKFGQMVVTTGNKSEMAVGYAT 413 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM GG+N LKD YKT+VF+L+ WRN+ L P EVIP I+ K PSAELR Q Sbjct: 414 LYGDMCGGYNALKDFYKTEVFELSKWRNAVHPKDALAPAGEVIPERIITKPPSAELREDQ 473 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGT 536 D++SLPPY +LDDI++ +V+ EE + +D TVR +EHL+Y +EYKRRQAP G Sbjct: 474 KDEDSLPPYEVLDDILRGLVDLEEDVDDILARGHDAATVRRIEHLVYIAEYKRRQAPPGV 533 Query: 537 KITAKSFGRDRLYPISNKFRD 557 K+ K+FGRDR YPI+N+FRD Sbjct: 534 KVGGKNFGRDRRYPITNRFRD 554 >gi|126730056|ref|ZP_01745868.1| NAD synthetase [Sagittula stellata E-37] gi|126709436|gb|EBA08490.1| NAD synthetase [Sagittula stellata E-37] Length = 562 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 244/559 (43%), Positives = 337/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN AKAR A EE QG DL+ E+FI+GY +DL+ K Sbjct: 11 MTDRFRLTMAQLNPTVGDLAGNAAKARAAWEEGRAQGADLVALPEMFITGYQAQDLIVKP 70 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ A I+ L DG A + +G P + + NS +L G + AV K LPN+ Sbjct: 71 AFVNAAVREIEALAKACADGPA-LAIGGPCPEGAKLHNSYYVLQGGKVAAVTHKYFLPNF 129 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F P+ +R+G+ +CED W ++ + +++ GAE L N SPY+ Sbjct: 130 NVFDEVRLFSRDQLQGPVSINGVRVGMPVCEDAWY-PDVVEAMEESGAEILVVPNGSPYF 188 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK + R + ++ LP+ Y+N VGGQD+ +FDG SF + + +LA Q+ F E Sbjct: 189 RNKYETRLNKMIARVVESGLPLAYLNMVGGQDDQVFDGGSFVMNPRARLAVQLPVFEE-- 246 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 T + + W T E DYN VL+LRDY +K F KV++G+S Sbjct: 247 VTTTVDFVRGDEGWTA----EEGTFVTHPDAWEQDYNVMVLALRDYCRKTGFGKVLLGMS 302 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A IAVDALG ENV+ +MLP +YTS SLEDA ACA ALGC+YD +PI + Sbjct: 303 GGVDSALVATIAVDALGAENVRCVMLPSEYTSEHSLEDAKACANALGCRYDFVPIGKGRD 362 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 363 AITETLAPLFEGTQPDLAEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 422 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ GP EVIP I+ K PSAELR Q D Sbjct: 423 DMAGGYNPIKDLYKTRVFETCRWRNANHRGWMKGPEGEVIPERIITKPPSAELRADQKDS 482 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I+ +V+ + + + Y+ E V+HLLY SEYKR Q+ G ++T Sbjct: 483 DSLPDYPVLDAILDILVDQDGAVSDCVAAGYSREDAMRVQHLLYISEYKRFQSAPGARLT 542 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 543 NRAFWLDRRYPIVNRWRDE 561 >gi|166064263|gb|ABY79062.1| NAD(+) synthase [endosymbiont of Ridgeia piscesae] Length = 553 Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust. Identities = 237/559 (42%), Positives = 336/559 (60%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K ++ +AQLNP VG +A N A A A ++ G D++ TE+FI+GY +DLV K Sbjct: 1 MSDKFRLTLAQLNPTVGALADNAALALDAWQQGRAAGADMVALTEMFITGYQVQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + I+ L D DG A + +G P D + + N+ IL+ G I A K LPN Sbjct: 61 AFTADAMAHIEQLAKDCADGPA-LGIGGPFADGDKLYNAYYILEGGKIAARVLKQKLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + G P +R+G ICED W +C+ L + GAE L N SPYY Sbjct: 120 TVFDEVRLYDVGPEQGPYQVGPLRIGSPICEDAWHAEEVCETLAETGAEILLVPNGSPYY 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +KL R + ++ LP++Y+N VGGQD+ +FDGASF + LA QM F Sbjct: 180 RDKLAVRMNHMVARVVETDLPLVYLNMVGGQDDQVFDGASFVLNRGGALALQMPAFD--T 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + W D A + E DY VL LRDY++K F K+++G+S Sbjct: 238 AIAHVDFTRTDAGWQAKVGDMAPQPDV----WEQDYRTMVLGLRDYMRKTGFRKILLGMS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DALG +NV+ +MLP +YTS SL DA A+ LGC+YD +PI + Sbjct: 294 GGIDSAIVATIATDALGADNVRCVMLPSEYTSEDSLNDAKEIAQNLGCRYDFVPISEGRA 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + + ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 354 AITNTLAPLFEGTKADVTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KD+YKT+VF+ WRN++ +GP E+IPP +++K P+AELR Q D Sbjct: 414 DMAGGYNPIKDMYKTRVFETCRWRNANKRDWMMGPSGEIIPPRVIDKPPTAELREDQRDD 473 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I+ +V++E+S + + + V+ VEHLLY SEYKR Q+ G ++T Sbjct: 474 DSLPPYDVLDAILTGLVDDEKSVAELVADGFARDVVKKVEHLLYISEYKRFQSAPGPRLT 533 Query: 540 AKSFGRDRLYPISNKFRDH 558 +SF DR YPI N++RD Sbjct: 534 MRSFWLDRRYPIVNRWRDQ 552 >gi|123441385|ref|YP_001005372.1| NAD synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088346|emb|CAL11137.1| putative glutamine-dependent NAD [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 540 Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust. Identities = 236/556 (42%), Positives = 347/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P +++ + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQQ--TAVLVGHPWREEGNLYNALSLFADGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHDTCVVELKGYRLGLLICEDLWFDGPV-DAVKAAGAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + Q ++ + + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLL------QFNECEVVPMMAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + E DET VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVAEGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|238795120|ref|ZP_04638711.1| NAD+ synthase [Yersinia intermedia ATCC 29909] gi|238725568|gb|EEQ17131.1| NAD+ synthase [Yersinia intermedia ATCC 29909] Length = 540 Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust. Identities = 236/556 (42%), Positives = 347/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G L++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLNEQQKAGASLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P +++ + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQQ--TAVLVGHPWREEGNLYNALSLFAEGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + + K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHESCVVELNGYRLGLLICEDLWFDGPV-DAAKAAGAEVILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ G LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAGHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 M QL++ N + + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TML------QLNECNVVPMTAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMSQLAPMFAGTGRDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + DE VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDEAIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|331004931|ref|ZP_08328344.1| NAD synthetase [gamma proteobacterium IMCC1989] gi|330421255|gb|EGG95508.1| NAD synthetase [gamma proteobacterium IMCC1989] Length = 547 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 242/556 (43%), Positives = 350/556 (62%), Gaps = 19/556 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 + + +AQ+NP+VGDI GN+AK + + +Q DL++F EL + GYPPEDL+ + S Sbjct: 4 VNVVMAQINPLVGDIEGNVAKVIESTITSQQQHNADLVVFPELTLCGYPPEDLLLRSSMD 63 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L S + A IVVG+P+++ N V +L G IA K +LPNY F Sbjct: 64 VRIADALLLLASQSFT--ATIVVGYPKREGGAHYNMVGVLQQGQWIAEYAKQHLPNYQVF 121 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F +G + F I + ICEDIW + + + K GA L ++NASP++ +K Sbjct: 122 DEKRYFEAGKAATVFDFHGIPTALSICEDIWHDEPLLQA-KAAGANLLININASPFHQSK 180 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++R ++++ + + I+YVNQVGGQDEL+FDG SF + Q Q + E F+ Sbjct: 181 QQERVDLLSHRAKQGDMAIVYVNQVGGQDELVFDGGSFVVNADGQCPVQAPLYEEGLFLA 240 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + +S+ ++M +S ++ P+ + Y A VL LRDYV KN F KV++GLSGGI Sbjct: 241 QCACVPNMSEVSFM--ESVDSVAPPMCDLSVIYQALVLGLRDYVNKNCFQKVVLGLSGGI 298 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL AIAVDALG + V IM+P+ YTS S EDAA AK LG +YD + I + + F Sbjct: 299 DSALTLAIAVDALGADKVTAIMMPFLYTSELSKEDAAEQAKRLGVQYDSIAIEGVYSAFM 358 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S + Q P+ + +N+Q+R RG +LMA+SN + ++LTT NKSE++VGY TLYGDM+ Sbjct: 359 SSLEQQFSGLPTDLAEQNLQARCRGVLLMAISNKTGCLVLTTGNKSELAVGYSTLYGDMA 418 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+ KT VF+LA +RNS G EVIP S++E+ PSAEL P Q D+++L Sbjct: 419 GGFDALKDVPKTMVFELAKYRNSMG--------DEVIPLSVIERPPSAELAPDQKDEDNL 470 Query: 484 PPYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 PPY +LD I++R +E+++S +N ++ ETV V L+ +EYKRRQ+PVG +I+ Sbjct: 471 PPYEVLDQILERYIEHDQSADAIVNAG--FDKETVYRVIRLVDINEYKRRQSPVGVRISK 528 Query: 541 KSFGRDRLYPISNKFR 556 K FGRDR YPI+N ++ Sbjct: 529 KGFGRDRRYPITNGWK 544 >gi|114770388|ref|ZP_01447926.1| NAD(+) synthase [alpha proteobacterium HTCC2255] gi|114549225|gb|EAU52108.1| NAD(+) synthase [alpha proteobacterium HTCC2255] Length = 552 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 254/559 (45%), Positives = 343/559 (61%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K+ K+ +AQLN VGD GN+ KAR A A ++G D++ F E+F++GY +DLV K Sbjct: 1 MTKEFKLTMAQLNASVGDFDGNLNKARDAYSIACKEGADMLAFPEMFLTGYQTQDLVQKS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ S + + DG I +G P QD + V N+ IL G II K +LPNY Sbjct: 61 AFVEDAQSKLIEFAKECSDGPT-IGIGVPLQDGDKVYNAYAILQNGKIITQIRKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P V +R+G ICED W ++C+ L++ GAE L S N SPYY Sbjct: 120 KVFDEKRVFDSGEIHGPYVVNGVRIGSPICEDAWF-PDVCETLEETGAEILISPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K KR ++ + +LP+ Y+N VGGQD+ +FDG SF + LA QM F E+N Sbjct: 179 RGKFDKRISLMVSRAVENNLPMAYLNLVGGQDDQVFDGGSFVINSDGALALQMPLF-EEN 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 T + + +W AS P E+ DY+ VL+LRDY++K F K ++G+S Sbjct: 238 IET-ITFKRTQDRWVAQEGKKAS---YPDHWEQ-DYHVMVLALRDYMKKTGFKKALLGMS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AAIA DALG ENV+ +MLP KYTS SL+DAA CA L K +PI D N Sbjct: 293 GGIDSALVAAIACDALGSENVRLVMLPSKYTSQNSLDDAANCANLLKAKIQTIPISDSFN 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + ENIQSR+RG +LM LSN MLLTT NKSE+SVGY T+YG Sbjct: 353 SVLKTLEPIFEGLDEDTTEENIQSRLRGLLLMGLSNKFNEMLLTTGNKSEVSVGYSTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNP+KDLYK +VF+ + WRN++ + G EVIP I++K P+AELR Q D Sbjct: 413 DMAGGFNPIKDLYKVRVFETSRWRNNNYFSWMKGSRGEVIPNEIIQKPPTAELRNDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y ILD I++ +++N+ S + Y V++VE LLY SEYKR Q+ GT+++ Sbjct: 473 DSLPDYEILDGILEMLMDNDASVADCVVAGYELSDVKHVEKLLYLSEYKRFQSAPGTRLS 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+F DR YPI+NK+RD+ Sbjct: 533 LKAFWLDRRYPIANKWRDN 551 >gi|270264765|ref|ZP_06193030.1| hypothetical protein SOD_i01820 [Serratia odorifera 4Rx13] gi|270041448|gb|EFA14547.1| hypothetical protein SOD_i01820 [Serratia odorifera 4Rx13] Length = 540 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 237/556 (42%), Positives = 343/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + +E + G DL++FTEL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNLLVGDIEGNTERMLQTVQEQQKAGADLVMFTELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + + L+ + D I+VG P ++ + + N++ + G ++A K LPNY Sbjct: 61 DFYQRCDAQLHRLQQASTD--VAILVGHPWREGDKLYNALSLFSEGQLLARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + RLG+LICED+W + K GAE + S+NASPY Sbjct: 119 GVFDEKRYFHAGNETCVVNLKGYRLGLLICEDLWFPEPV-DAAKAAGAEMILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ G HLP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAGHCQRTHLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQ- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 L ++N + + L + Y A VL++RDYV KN F ++GLS Sbjct: 237 --------VTLLRFNELDVVPMTAPAAELPQLAQVYEALVLAVRDYVTKNGFKGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++D++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGVEFDIVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLTPMFAGTERDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + E DE VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVERDKSVADLVAEGFDEAIVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|153947276|ref|YP_001400135.1| NAD synthetase [Yersinia pseudotuberculosis IP 31758] gi|170023507|ref|YP_001720012.1| NAD synthetase [Yersinia pseudotuberculosis YPIII] gi|152958771|gb|ABS46232.1| NAD+ synthetase family protein [Yersinia pseudotuberculosis IP 31758] gi|169750041|gb|ACA67559.1| NAD+ synthetase [Yersinia pseudotuberculosis YPIII] Length = 540 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 237/556 (42%), Positives = 346/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLNEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C ++ L++ T ++VG P ++ + + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEVQLERLQAATPH--IAVLVGHPWREGDKLYNALSLFAQGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + I +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHQSCVVELKGYRLGLLICEDLWLDGPI-DAVKAAGAEVVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQVGGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQVGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + QL++ N + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLL------QLNECNVIPMTAPVAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG K+DV+ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGVKFDVMSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFADTGRDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLAEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + DE VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVAELVADGFDEAIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A+SFG+DR YPI++ F Sbjct: 520 ARSFGKDRRYPITSGF 535 >gi|238759702|ref|ZP_04620862.1| NAD+ synthase [Yersinia aldovae ATCC 35236] gi|238702130|gb|EEP94687.1| NAD+ synthase [Yersinia aldovae ATCC 35236] Length = 540 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 235/556 (42%), Positives = 350/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P ++ + N++ + G ++ K LPNY Sbjct: 61 DFYQRCKTQLDRLQAATQH--TAVLVGHPWREAGKLYNALSLFAEGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + + RLG+LICED+W + + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGDKSCVVELKGYRLGLLICEDLWFDGPV-DAVKAAGAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +++ + + +A +P + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQFNGCEVVPM-------TAPVAELPPLAQV--YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMSQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD+I++ VE+++S + + DET VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDEILEGYVEHDKSVTDLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|22125216|ref|NP_668639.1| NAD synthetase [Yersinia pestis KIM 10] gi|45442325|ref|NP_993864.1| NAD synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51597189|ref|YP_071380.1| NAD synthetase [Yersinia pseudotuberculosis IP 32953] gi|108808346|ref|YP_652262.1| NAD synthetase [Yersinia pestis Antiqua] gi|108811388|ref|YP_647155.1| NAD synthetase [Yersinia pestis Nepal516] gi|145599529|ref|YP_001163605.1| NAD synthetase [Yersinia pestis Pestoides F] gi|149365369|ref|ZP_01887404.1| putative glutamine-dependent NAD [Yersinia pestis CA88-4125] gi|162418452|ref|YP_001607954.1| NAD synthetase [Yersinia pestis Angola] gi|165928256|ref|ZP_02224088.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939227|ref|ZP_02227777.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008048|ref|ZP_02228946.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212501|ref|ZP_02238536.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398909|ref|ZP_02304433.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421435|ref|ZP_02313188.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423380|ref|ZP_02315133.1| NAD+ synthetase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469238|ref|ZP_02333942.1| NAD+ synthetase family protein [Yersinia pestis FV-1] gi|186896284|ref|YP_001873396.1| NAD synthetase [Yersinia pseudotuberculosis PB1/+] gi|218929969|ref|YP_002347844.1| NAD synthetase [Yersinia pestis CO92] gi|229838496|ref|ZP_04458655.1| putative glutamine-dependent NAD [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895500|ref|ZP_04510671.1| putative glutamine-dependent NAD [Yersinia pestis Pestoides A] gi|229899066|ref|ZP_04514210.1| putative glutamine-dependent NAD [Yersinia pestis biovar Orientalis str. India 195] gi|229901639|ref|ZP_04516761.1| putative glutamine-dependent NAD [Yersinia pestis Nepal516] gi|270489830|ref|ZP_06206904.1| NAD+ synthetase [Yersinia pestis KIM D27] gi|294504529|ref|YP_003568591.1| NAD(+) synthase [Yersinia pestis Z176003] gi|21958083|gb|AAM84890.1|AE013734_5 putative NH3-dependent NAD(+) synthetase [Yersinia pestis KIM 10] gi|45437189|gb|AAS62741.1| putative glutamine-dependent NAD [Yersinia pestis biovar Microtus str. 91001] gi|51590471|emb|CAH22111.1| putative glutamine-dependent NAD [Yersinia pseudotuberculosis IP 32953] gi|108775036|gb|ABG17555.1| glutamine-dependent NAD [Yersinia pestis Nepal516] gi|108780259|gb|ABG14317.1| putative glutamine-dependent NAD [Yersinia pestis Antiqua] gi|115348580|emb|CAL21522.1| putative glutamine-dependent NAD [Yersinia pestis CO92] gi|145211225|gb|ABP40632.1| glutamine-dependent NAD [Yersinia pestis Pestoides F] gi|149291782|gb|EDM41856.1| putative glutamine-dependent NAD [Yersinia pestis CA88-4125] gi|162351267|gb|ABX85215.1| NAD+ synthetase family protein [Yersinia pestis Angola] gi|165912827|gb|EDR31454.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165919763|gb|EDR37096.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992430|gb|EDR44731.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206432|gb|EDR50912.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960924|gb|EDR56945.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051413|gb|EDR62821.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057550|gb|EDR67296.1| NAD+ synthetase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186699310|gb|ACC89939.1| NAD+ synthetase [Yersinia pseudotuberculosis PB1/+] gi|229681568|gb|EEO77662.1| putative glutamine-dependent NAD [Yersinia pestis Nepal516] gi|229688011|gb|EEO80083.1| putative glutamine-dependent NAD [Yersinia pestis biovar Orientalis str. India 195] gi|229694862|gb|EEO84909.1| putative glutamine-dependent NAD [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701306|gb|EEO89334.1| putative glutamine-dependent NAD [Yersinia pestis Pestoides A] gi|262362479|gb|ACY59200.1| NAD(+) synthase [Yersinia pestis D106004] gi|262366517|gb|ACY63074.1| NAD(+) synthase [Yersinia pestis D182038] gi|270338334|gb|EFA49111.1| NAD+ synthetase [Yersinia pestis KIM D27] gi|294354988|gb|ADE65329.1| NAD(+) synthase [Yersinia pestis Z176003] gi|320016055|gb|ADV99626.1| putative glutamine-dependent NAD [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 540 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 236/556 (42%), Positives = 346/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLNEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C ++ L++ T ++VG P ++ + + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEVQLERLQAATPH--IAVLVGHPWREGDKLYNALSLFAQGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + I +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHQSCVVELKGYRLGLLICEDLWLDGPI-DAVKAAGAEVVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + QL++ N + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLL------QLNECNVIPMTAPVAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG K+DV+ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGVKFDVMSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFADTGRDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLAEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + DE VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVAELVADGFDEAIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A+SFG+DR YPI++ F Sbjct: 520 ARSFGKDRRYPITSGF 535 >gi|238750370|ref|ZP_04611871.1| NAD+ synthase [Yersinia rohdei ATCC 43380] gi|238711301|gb|EEQ03518.1| NAD+ synthase [Yersinia rohdei ATCC 43380] Length = 540 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 236/556 (42%), Positives = 346/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ + ++VG P +++ + N++ + G + A K LPNY Sbjct: 61 DFYQRCEAQLDRLQAASM--ATAVLVGHPWREEGNLYNALSLFANGKLQARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHDTCVVELKGYRLGLLICEDLWFDGPV-DAVKAAGAEVVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGTMTHRLAAFVEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 M QL++ + + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TML------QLNECEVVPMAAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + DE VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDEAIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|238788204|ref|ZP_04631999.1| NAD+ synthase [Yersinia frederiksenii ATCC 33641] gi|238723791|gb|EEQ15436.1| NAD+ synthase [Yersinia frederiksenii ATCC 33641] Length = 540 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 236/556 (42%), Positives = 346/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ ++VG P +++ + N++ + G + A K LPNY Sbjct: 61 DFYQRCEAQLDRLQAAAQQ--TAVLVGHPWREEGNLYNALSLFADGKLQARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + I +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHDTCVVELKGYRLGLLICEDLWFDGPI-DAVKAAGAEVVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYVRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + Q ++ + + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLL------QFNECEVVPMMAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + DET VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILQGYVEQDKSVADLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|332162672|ref|YP_004299249.1| NAD synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606778|emb|CBY28276.1| nad synthetase; Glutamine amidotransferase chain of NAD synthetase [Yersinia enterocolitica subsp. palearctica Y11] gi|325666902|gb|ADZ43546.1| NAD synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 540 Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust. Identities = 235/556 (42%), Positives = 346/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P +++ + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQQ--TAVLVGHPWREEGNLYNALSLFADGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + + +K AE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHDTCVVELKGYRLGLLICEDLWFDGPV-DAVKAARAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + Q ++ + + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLL------QFNECEVVPMMAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + E DET VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVAEGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|254511880|ref|ZP_05123947.1| glutamine-dependent NAD(+) synthetase [Rhodobacteraceae bacterium KLH11] gi|221535591|gb|EEE38579.1| glutamine-dependent NAD(+) synthetase [Rhodobacteraceae bacterium KLH11] Length = 552 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 245/560 (43%), Positives = 343/560 (61%), Gaps = 11/560 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I +AQLNP+VGDI GN AKA+ A ++ DL+ E+FI+GY +DLV K Sbjct: 1 MADGFRITLAQLNPIVGDIEGNAAKAKAAWQQGRTAQADLVALPEMFITGYNTQDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F A A+ L D DG A + +G P + + N+ +IL G I++ K +LPN Sbjct: 61 AFHHAAMDAVQALARDCADGPA-LAIGGPWFEDGKLYNAYLILKGGRIVSKALKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + +G P +IR+G ICED W + ++ + L++ GAEFL N SPY+ Sbjct: 120 TVFDEVRLYDAGPMGGPYAVGNIRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R + + LP+IY+N VGGQD+ +FDGA+F + +LAF+M F E Sbjct: 179 RDKYDIRLNHMVARTVETGLPVIYLNMVGGQDDQVFDGATFGLNPGGELAFRMPVFDEAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGL 299 + ++ W + +P + E DY A V SLRDY+ K F KV++GL Sbjct: 239 CTID--LERGDDGWRITPAE-----VVPQPDTWEQDYRAMVQSLRDYMGKTGFGKVVLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGG+DSAL AAIAVDA+G NV+ +MLP +YTS SL+DA A AKALG YD +PI + Sbjct: 292 SGGVDSALVAAIAVDAIGAGNVRCVMLPSEYTSQSSLDDAEAVAKALGVHYDFVPISEGR 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+Y Sbjct: 352 AAVTNTLAPLFAGQDEDLTEENIQSRLRGLLLMAISNKFGEMLLTTGNKSEVAVGYATIY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI PS+++K PSAELR Q D Sbjct: 412 GDMNGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPAGEVIRPSVIDKPPSAELREDQKD 471 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKI 538 +SLP YP+LD I+ +V+ + S + DE R VEHL+Y SEYKR Q+ GT++ Sbjct: 472 SDSLPDYPVLDAILDILVDQDGSIADCVAAGFDEVEARRVEHLIYISEYKRFQSAPGTRL 531 Query: 539 TAKSFGRDRLYPISNKFRDH 558 T ++F DR YPI N++RD Sbjct: 532 TPRAFWLDRRYPIVNRWRDR 551 >gi|238753908|ref|ZP_04615268.1| NAD+ synthase [Yersinia ruckeri ATCC 29473] gi|238707896|gb|EEQ00254.1| NAD+ synthase [Yersinia ruckeri ATCC 29473] Length = 549 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 237/556 (42%), Positives = 342/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 10 MSRSLSIALAQLNLLVGDIEGNTERMLQTLHEQQKAGADLVMFSELSLSGYPPEDLLYRS 69 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F C + ++ L++ + ++VG P ++ + + N++ + AG ++ K LPNY Sbjct: 70 DFYLRCEAQLERLRAASQT--VAVLVGHPWREGDKLYNALSLFSAGKLLGRYFKQQLPNY 127 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + + + RLG+LICED+W + + K GAE L S+NASPY Sbjct: 128 GVFDEKRYFTPGDKSCVVELKGYRLGLLICEDLWFSEPV-DAAKAAGAELLLSINASPYN 186 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ +P++Y+NQVGGQDELIFDG S FD + + ++ F+EQ Sbjct: 187 REKPYIRKTLMASHCQRTQMPLVYLNQVGGQDELIFDGCSKVFDSKGNMTHRLAAFAEQT 246 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + QL + + PL E Y A VL++RDYV KN F ++GLS Sbjct: 247 TLC------QLQDLVVEPMAAPAADLSPLAEV---YEALVLAVRDYVTKNGFKGAVLGLS 297 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGKE VQ +M+P++YT+ S+ DA A+ LG ++D+L I + + Sbjct: 298 GGIDSALTLAIAVDALGKEKVQALMMPFRYTADISIADAKEEAEILGIEFDLLSIEPMFD 357 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 358 AFMGQLAPMFAGTEKDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 417 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VFQL +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 418 DMAGGFDVLKDVPKTLVFQLCEYRNT---------VSYVIPQRVIDRPPSAELAPDQLDQ 468 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE++ES + DE+ VR V L+ +EYKRRQ+ VG +IT Sbjct: 469 DSLPPYDILDAILEGYVEHDESVADLVANGFDESIVRKVIRLVDINEYKRRQSAVGPRIT 528 Query: 540 AKSFGRDRLYPISNKF 555 A+SFG+DR YPI++ F Sbjct: 529 ARSFGKDRRYPITSGF 544 >gi|288940531|ref|YP_003442771.1| NAD+ synthetase [Allochromatium vinosum DSM 180] gi|288895903|gb|ADC61739.1| NAD+ synthetase [Allochromatium vinosum DSM 180] Length = 536 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 237/559 (42%), Positives = 334/559 (59%), Gaps = 35/559 (6%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +I I Q+NP+VGD+AGN + A A+ G+DL++ EL ++GYPPEDL+ + FI Sbjct: 4 RIEILQMNPLVGDVAGNAERLIAAARRAHASGIDLLVCPELALTGYPPEDLLLRPEFIAR 63 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A++ L+S+ G +V G+PR G+ N ++ G +IA K +LPNYS F E Sbjct: 64 VETALERLQSEIR--GITLVFGYPRASVGGLFNVAGVIRDGTLIAEYAKQHLPNYSVFDE 121 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 KR F G +R G+ +CEDIW + + GA+ L +LNASP++ K+ Sbjct: 122 KRYFQPGTGATVFEQCGLRFGLSVCEDIWWEEP-TREAAEAGAQVLLNLNASPFHGGKIA 180 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW 245 +R +V + L I+Y N VGGQDEL+FDGASF D ++ + F+E + Sbjct: 181 EREALVARRARAHGLTILYANLVGGQDELVFDGASFVVDPDGRITHRAGLFTETTLALKL 240 Query: 246 HYD--------QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 D + L+ W EEE Y A VL +RDYV+KN F ++ Sbjct: 241 DADGVPVRAGTEPLTDWP--------------GEEETIYEALVLGVRDYVRKNGFEGAVL 286 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIAVDALG + V+ +++P +YT+ S EDA A+ LG V+PI Sbjct: 287 GLSGGIDSALTLAIAVDALGADRVEAVLMPSRYTADMSNEDALEQARRLGVSTRVIPIEP 346 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + F ++ +P + ENIQ+R RG ILMA+SN S +LLTT NKSE++VGY T Sbjct: 347 AFHAFLDMLEPVFAGQPVDVTEENIQARCRGIILMAISNKSGRILLTTGNKSEMAVGYAT 406 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF P+KD+ K V++LA +RN + VIP ++E++PSAELRP Q Sbjct: 407 LYGDMAGGFAPIKDVPKMLVYRLARYRNGR---------SPVIPERVIERAPSAELRPDQ 457 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+KR +E++ES + Q Y + VR V L+ +EYKRRQAP G Sbjct: 458 TDQDSLPPYDLLDAILKRYIEDDESVEDIVAQGYPADVVRRVARLVDRNEYKRRQAPPGV 517 Query: 537 KITAKSFGRDRLYPISNKF 555 +I+ ++FGRDR YPI++ F Sbjct: 518 RISRRAFGRDRRYPITSGF 536 >gi|157371885|ref|YP_001479874.1| NAD synthetase [Serratia proteamaculans 568] gi|157323649|gb|ABV42746.1| NAD+ synthetase [Serratia proteamaculans 568] Length = 540 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 236/556 (42%), Positives = 346/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + +E + G DL++FTEL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNLLVGDIEGNTERMLQTVQEQQKAGADLVMFTELALSGYPPEDLLYRN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + + L+ + + I+VG P ++ + + N++ + G ++A K LPNY Sbjct: 61 DFYQRCDAQLQRLQQASAE--VAILVGHPWREGDKLYNALSLFSEGQLLARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + +LG+LICED+W + K GAE + S+NASPY Sbjct: 119 GVFDEKRYFQAGSETCVVELKGYQLGLLICEDLWFPGPV-DAAKAAGAEMILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ G HLP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAGHCQRTHLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLTAFAEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E + + + M+ +A L + Y A VL++RDYV KN F ++GLS Sbjct: 238 TLLELNELEVVP----MTAPAAE-----LPQLAQVYEALVLAVRDYVTKNGFKGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++D++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDIVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLTPMFAGTERDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVIDRPPSAELAPDQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + E DE VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVERDKSVADLVAEGFDEAIVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|238784206|ref|ZP_04628219.1| NAD+ synthase [Yersinia bercovieri ATCC 43970] gi|238714915|gb|EEQ06914.1| NAD+ synthase [Yersinia bercovieri ATCC 43970] Length = 540 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 235/556 (42%), Positives = 347/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L +A+AQLN +VGDI GN + + E + G L++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSVALAQLNWLVGDIEGNTERMLQTLNEQQKAGASLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P ++ + N++ + G ++A K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQH--IAVLVGHPWREAGNLYNALSLFSEGKLLARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + + K GAE L S+NASPY Sbjct: 119 GVFDEKRYFSAGHDSCVVELKGYRLGLLICEDLWFDGPV-DAAKAAGAEVLLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD L ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNLTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + QL++ + + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLL------QLNECEVVPMMAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+++RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSAYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + DET VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|238762815|ref|ZP_04623784.1| NAD+ synthase [Yersinia kristensenii ATCC 33638] gi|238699120|gb|EEP91868.1| NAD+ synthase [Yersinia kristensenii ATCC 33638] Length = 540 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 234/556 (42%), Positives = 347/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + ++ L++ T ++VG P ++Q + N++ + G + K LPNY Sbjct: 61 DFYQRCEAQLNRLQAATQQ--TAVLVGHPWREQGELYNALSLFADGKLQGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHQSCVVELKGYRLGLLICEDLWFDGPV-DAVKAAGAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + Q ++ + + + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLL------QFNECDVVPMTAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGSKRDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + DET VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|304319845|ref|YP_003853488.1| NAD(+) synthase [Parvularcula bermudensis HTCC2503] gi|303298748|gb|ADM08347.1| NAD(+) synthase [Parvularcula bermudensis HTCC2503] Length = 555 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 245/557 (43%), Positives = 336/557 (60%), Gaps = 15/557 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L IA+A LNP VGD+AGNI + + A +EA DL++ +EL +SGYPPEDLV + Sbjct: 5 RLSIALAVLNPTVGDVAGNIERIKAAHKEAT--DCDLVVCSELCVSGYPPEDLVLHAPYA 62 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFP---RQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 C A+D L T DG A +VVG P Q N+ V+L G + V K LP Y Sbjct: 63 IRCREAVDALAQVTADGPA-LVVGTPWPAEGRQRKPYNASVLLADGKVQTVAYKRYLPEY 121 Query: 121 SEFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E RTF + + D + +RLG++ CED+W + L ++GAE + + SP+ Sbjct: 122 GVFDEPRTFSASTAIPDLGIVAGVRLGLMTCEDMWYPTP-AADLAERGAEIFVAPHGSPF 180 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +R ++ P+++ NQVGGQDEL+FDG +F D + + ++ F+ Sbjct: 181 RLTAHAERLFHAKARVRETGRPLVFTNQVGGQDELVFDGGAFAVD-RDEGVYRGPLFARG 239 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 T W D+ ++ ++ + P+ EE Y A V RDYV+K+ F V++GL Sbjct: 240 ITRTVWRRDEA----GHLRFETGPSEDWPV-EEPLIYPALVTGTRDYVRKSGFSSVVLGL 294 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ AAIAVDALG +NV+ +MLP +YTS +SL+DAAACAKALG D + I ++ Sbjct: 295 SGGIDSAMVAAIAVDALGPDNVRCVMLPSRYTSTESLDDAAACAKALGVTLDRVEIEPMI 354 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F ++ + + EN+QSRIRG LMALSN +LL+T NKSE++ GY TLY Sbjct: 355 AVFTDSLAPLFAGRSADVTEENLQSRIRGTALMALSNKFGCLLLSTGNKSEMATGYATLY 414 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+G +NPLKD+YK+ VF+LA WRN++ + GLGP EVIP I+ K PSAELR Q D Sbjct: 415 GDMNGAYNPLKDVYKSVVFRLARWRNANHPSGGLGPRGEVIPERIITKPPSAELRADQRD 474 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKI 538 +SLP Y ILDDI+ +VE + S +D V V LL SEYKRRQAP G KI Sbjct: 475 DQSLPAYDILDDILSGLVEEDLSPKAVAARGHDPALVTKVRRLLLLSEYKRRQAPPGPKI 534 Query: 539 TAKSFGRDRLYPISNKF 555 T ++FGRDR YP+ N++ Sbjct: 535 TVRNFGRDRRYPLLNRW 551 >gi|126737475|ref|ZP_01753210.1| NAD synthetase [Roseobacter sp. SK209-2-6] gi|126722060|gb|EBA18763.1| NAD synthetase [Roseobacter sp. SK209-2-6] Length = 552 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/559 (43%), Positives = 349/559 (62%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I++AQLNP VGD+ GN AKAR+A E + DL+ E+F++GY +DLV K Sbjct: 1 MADRFRISLAQLNPTVGDLDGNAAKARQAWTEGRKAKADLVALPEMFLTGYNAQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F A + + L D DG A + +G P + + N+ +IL G I + K +LPN Sbjct: 61 VFHLAAMAKAEELAKDCADGPA-LAIGCPWVEDGKLYNAYLILKDGKIASRCLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L++ GAEFL N SPY+ Sbjct: 120 TVFDEVRIFDAGPLGGPYAVGNTRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R + + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMEVRQNHMVARAVETGLPVIYLNMVGGQDDQVFDGGSFVLNPNGALALQMPVFDE-- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 MT+ ++ W + + A ++P E E DY V +LRDY++K+ F KV++GLS Sbjct: 237 CMTQLDLERAPEGWRAIEGEKA---HLP-DEWEQDYRVMVEALRDYLRKSGFQKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDA+G ENV+ +MLP +YTS +SL+DA A A+ALG YD +PI + Sbjct: 293 GGVDSAIVAAIAVDAIGAENVRCVMLPSEYTSRESLDDAEAVAEALGVHYDYVPITEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFEGRDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN + +GP EVI P++++K PSAELR Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNDNHRPWMMGPAGEVIRPNVIDKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I++ +V+ + S + + ET + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDAILEILVDQDGSIADCVAAGFEAETAKRVEHLVYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N+FRD Sbjct: 533 PRAFWLDRRYPIVNRFRDQ 551 >gi|317493146|ref|ZP_07951569.1| NAD synthase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918806|gb|EFV40142.1| NAD synthase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 540 Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust. Identities = 237/556 (42%), Positives = 344/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLNTLCEQRKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F C + +D L+ + D ++VG P ++ E + N++ + G ++A K LPNY Sbjct: 61 DFYLRCQAQLDRLQQASTD--IAVLVGHPWREGEHLYNALSLFSEGQLVARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + + + GAE L S+NASPY Sbjct: 119 GVFDEKRYFSAGHESCVVELKGYRLGLLICEDLWFDGPV-DAVAAAGAEVLLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++T LP++Y+NQVGGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLLTSHCQRTGLPLVYLNQVGGQDELIFDGCSKGFDASGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + H D Q+ M +AS L E Y A VL++ DYV KN F ++GLS Sbjct: 238 ALFNLH-DMQVEP---MVAPAAS-----LPELAQIYEALVLAVHDYVTKNGFQGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++D++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQAMMMPFRYTADISIADAKEEAEILGVEFDIVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFAGTERDTTEENLQARCRGVVLMALSNKRRRLVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVIDRPPSAELAPDQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVAAGFDEAVVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|259416895|ref|ZP_05740815.1| glutamine-dependent NAD+ synthetase [Silicibacter sp. TrichCH4B] gi|259348334|gb|EEW60111.1| glutamine-dependent NAD+ synthetase [Silicibacter sp. TrichCH4B] Length = 552 Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust. Identities = 243/558 (43%), Positives = 344/558 (61%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I +AQLNP VGD+AGN AKA A +E G DL+ E+FI+GY +DLV K Sbjct: 1 MADSFRITLAQLNPTVGDLAGNAAKALSAWQEGRESGADLVALPEMFITGYNTQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F QA + ++ L + T +G A + +G P + + N+ +IL G I + K +LPN Sbjct: 61 AFHQAAIAEVEALAAATAEGPA-LAIGSPWVEDGKLFNAYLILKGGKIASKCLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L++ GAEFL N SPYY Sbjct: 120 TVFDEVRIFDAGPLGGPYSVGNTRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ R+ + + LP+IY+N VGGQD+ +FDG +F + LA QM F E Sbjct: 179 RGKMETRYNHMVARAVETGLPVIYLNMVGGQDDQVFDGGTFALNPHGALAVQMPVFDE-- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + ++ W + A ++P E DY VLSLRDY+ K F K ++GLS Sbjct: 237 CIAQLDLERTADGWRIKEGEKA---HLP-DAWEQDYRTMVLSLRDYMGKTGFKKALLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDALG +NV+ +MLP +YTS SLEDA A AKALG YD +PI + Sbjct: 293 GGVDSAIVAAIAVDALGAQNVRCVMLPSEYTSKDSLEDAEAVAKALGVHYDYVPISEGRE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFAGRDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI P++++K PSAELR Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPSGEVIRPNVIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I+ +V+ + S + ++ + + VEHLLY SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDAILDILVDQDGSIADCVAAGFDRDVAKRVEHLLYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N++RD Sbjct: 533 KRAFWLDRRYPIVNRWRD 550 >gi|293394849|ref|ZP_06639139.1| NAD(+) synthase [Serratia odorifera DSM 4582] gi|291422600|gb|EFE95839.1| NAD(+) synthase [Serratia odorifera DSM 4582] Length = 540 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 236/556 (42%), Positives = 347/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + +E + G DL++FTEL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNLLVGDIEGNSERMLQIVQEQQKAGADLVMFTELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C ++ L+ + G I+VG P ++ + + N++ + G + A K LPNY Sbjct: 61 DFYQRCDLQLNRLQQAS--GEVAILVGHPWREGDKLYNALSLFADGELRARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + + RLG+LICED+W I K GAE + S+NASPY Sbjct: 119 GVFDEKRYFHAGQESCVVELKGYRLGLLICEDLWFPEPI-DAAKAAGAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ G +LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAGHCRRTNLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +++ + + M+ +A L + Y A VL++RDYV KN F ++GLS Sbjct: 238 TLLQFNEREVVP----MTAPAAE-----LPQLAQIYEALVLAVRDYVNKNGFKGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGKE VQ +M+P++YT+ S+ DA A+ LG ++DV+ I + + Sbjct: 289 GGIDSALTLAIAVDALGKEKVQALMMPFRYTADISIADAKEEAEILGVEFDVVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFAGTERDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE + S ++ +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVERDMSVVDLVAAGFDEAIVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|269138134|ref|YP_003294834.1| NAD synthase [Edwardsiella tarda EIB202] gi|267983794|gb|ACY83623.1| NAD synthase [Edwardsiella tarda EIB202] gi|304558179|gb|ADM40843.1| NAD synthetase / Glutamine amidotransferase chain of NAD synthetase [Edwardsiella tarda FL6-60] Length = 540 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 235/556 (42%), Positives = 341/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + + G D+++F+EL + GYPPEDL+++ Sbjct: 1 MSRTLSIALAQLNLLVGDIEGNAERMLAPLAQQQQAGADVVMFSELALCGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + L+ + + ++VG P +D E + N++ + G ++A K LPNY Sbjct: 61 DFHQRCQRQLARLQQASAE--IAVIVGHPWRDGECLYNALSVFAEGRLLARYYKQCLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + + RLG+LICED+W ++ + L GAE L ++NASPY Sbjct: 119 GVFDEKRYFSAGDTPCTVTLKGYRLGLLICEDVWFDAPV-DALAAAGAEVLLTINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R+ ++ LP++Y+NQVGGQDEL+FDG S FD + L ++ F EQ Sbjct: 178 REKPYIRNTLLADHCRRTGLPLLYLNQVGGQDELVFDGCSKAFDARGALTHRLAAFDEQ- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T+ D + S + PL + Y A VL++RDYV KN F ++GLS Sbjct: 237 -VTQVRLDD----GRLLPMASPAAELPPLAQI---YQALVLAVRDYVGKNGFQGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK VQ +M+P++YT+ S+ DA A A A+G ++D+L I + + Sbjct: 289 GGIDSALTLAIAVDALGKAQVQAVMMPFRYTADISVADAQAQALAMGVEFDILSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFAGTERDTTEENLQARCRGVVLMALSNKRRRLVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VFQLA +RN+ L+ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFQLARYRNT---------LSPAIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILQGYVEQDKSVAQLVADGFDEAVVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|99082118|ref|YP_614272.1| NAD synthetase [Ruegeria sp. TM1040] gi|99038398|gb|ABF65010.1| NAD+ synthetase [Ruegeria sp. TM1040] Length = 553 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 245/558 (43%), Positives = 342/558 (61%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I +AQLNP VGD+AGN AKA A +E DL+ E+FI+GY +DLV K Sbjct: 2 MADSFRITLAQLNPTVGDLAGNAAKALSAWQEGRAADADLVALPEMFITGYNTQDLVMKP 61 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F QA + ++ L T +G A + +G P + + N+ +IL G I + K +LPN Sbjct: 62 AFHQAAIAEVEALAKATAEGPA-LAIGSPWVEDGKLYNAYLILKGGKIASKCLKHHLPNE 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L++ GAEFL N SPYY Sbjct: 121 TVFDEVRIFDAGPLGGPYSVGNTRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYY 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ R + + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 180 RGKMETRINHMVARAVETGLPVIYLNMVGGQDDQVFDGGSFALNPHGALAVQMPVFDE-- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + ++ W + A ++P E DY VLSLRDY+ K F K ++GLS Sbjct: 238 CIAQLDLERTADGWRIKEGEKA---HLP-DAWEQDYRTMVLSLRDYMGKTGFKKALLGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDALG ENV+ +MLP +YTS +SLEDA A AKALG YD +PI + Sbjct: 294 GGVDSAIVAAIAVDALGAENVRCVMLPSEYTSKESLEDAEAVAKALGVHYDYVPISEGRE 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 354 AITNTLAPLFAGRDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI P++++K PSAELR Q D Sbjct: 414 DMNGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPEGEVIRPNVIDKPPSAELREDQKDS 473 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I+ +V+ E S + ++ + + VEHLLY SEYKR Q+ G ++T Sbjct: 474 DSLPDYPELDAILDILVDQEGSIADCVAAGFDRDVAKRVEHLLYISEYKRFQSAPGARLT 533 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N++RD Sbjct: 534 KRAFWLDRRYPIVNRWRD 551 >gi|294635169|ref|ZP_06713677.1| NAD(+) synthase [Edwardsiella tarda ATCC 23685] gi|291091431|gb|EFE23992.1| NAD(+) synthase [Edwardsiella tarda ATCC 23685] Length = 540 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 237/559 (42%), Positives = 343/559 (61%), Gaps = 28/559 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + A + + G D+++F+EL + GYPPEDL+++ Sbjct: 1 MSRTLSIALAQLNLLVGDIEGNAERMLAAMAQQQQAGADIVMFSELALCGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C S ++ L+ + G ++VG P +++ + N++ + G + A K LPNY Sbjct: 61 DFHQRCQSQLERLRQAS--GSIAVIVGHPWREKGALYNALSLFADGQLQARYYKQRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + + + RLG+LICED+W N + + GAE L ++NASPY Sbjct: 119 GVFDEMRYFSAGDTPCVVTLKGYRLGLLICEDVWFNEPV-DAVAAAGAEILLTINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R+ ++ LP++Y+NQVGGQDEL+FDG S FD Q QL ++ F Sbjct: 178 REKPYMRNTLLADHCRRTGLPLLYLNQVGGQDELVFDGCSKVFDAQGQLTHRLAAF---- 233 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEA---DYNACVLSLRDYVQKNNFHKVII 297 D+Q++Q + + M P E A Y A VL++RDYV KN F ++ Sbjct: 234 -------DEQVTQVQ-LVETRPQPMRDPASELPALAQIYRALVLAVRDYVGKNGFQGAVL 285 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIAVDALGKE VQ +M+P++YT+ S+ DA A+ +G ++D+L I Sbjct: 286 GLSGGIDSALTLAIAVDALGKERVQALMMPFRYTADISVADAQEQAQTMGVEFDILSIEP 345 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + F ++ EN+Q+R RG +LMALSN + ++LTT NKSE++VGY T Sbjct: 346 MFDAFMGQLAPLFAGTERDTTEENLQARCRGVVLMALSNKRRRLVLTTGNKSEMAVGYAT 405 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF+ LKD+ KT VFQLAS+RN+ G VIP ++++ PSAEL P Q Sbjct: 406 LYGDMAGGFDVLKDVPKTLVFQLASYRNTLGY---------VIPQRVIDRPPSAELAPDQ 456 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+SLPPY +LD I++ VE ++S + +++ VR V L+ +EYKRRQA VG Sbjct: 457 VDQDSLPPYDVLDAILQGYVEQDKSVAQLVADGFDEAVVRKVIRLVDINEYKRRQAAVGP 516 Query: 537 KITAKSFGRDRLYPISNKF 555 +ITA++FG+DR YPI++ F Sbjct: 517 RITARNFGKDRRYPITSGF 535 >gi|254490943|ref|ZP_05104125.1| NAD synthase family [Methylophaga thiooxidans DMS010] gi|224463852|gb|EEF80119.1| NAD synthase family [Methylophaga thiooxydans DMS010] Length = 546 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 235/558 (42%), Positives = 338/558 (60%), Gaps = 23/558 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 + + + + Q+NPVVGD+AGN+ K + +A Q G DL++F EL ++GYPPEDL+ + Sbjct: 1 MNDVTLVMGQINPVVGDVAGNVVKIITSAHQARDQFGADLVVFPELTLTGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD-QEGVLNSVVILDAGNIIAVRDKINLPN 119 ++ + A+DTL+ H G I++G P + ++ + N+ ++ GN +A K LPN Sbjct: 61 GLLKRVNKALDTLQK--HVEGVAIIIGHPDGEVRKELYNAASMIVDGNRVATYFKHKLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 YS F EKR F+ G + F+ IR G+ +CEDIW C+ GAE L +LNASPY Sbjct: 119 YSVFDEKRYFVEGKEACVVDFKGIRFGLTLCEDIWFTEPACQA-ADAGAEILINLNASPY 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K + R V ++ LP++YVNQVGGQDEL+FDG SF D + + + F Sbjct: 178 RMGKWQLREAEVKKRVLETGLPVVYVNQVGGQDELVFDGCSFALDHRGEKVARAPAFESG 237 Query: 240 NF-MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + +T + + Q + M I E Y A LRDY++KN+F V+IG Sbjct: 238 LYPLTVNRSENGIVQIH-------GQMAIKENEHAMIYKALTTGLRDYIEKNHFPGVVIG 290 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A+AVDA+G E V +M+P +YT+ SL+DA A A LG Y V+ I + Sbjct: 291 LSGGIDSALTLALAVDAIGAEKVHAVMMPTRYTAQISLDDAKAMADGLGVHYSVMSIEPV 350 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + +S P ENIQ+R RG ILMALSN + +M+L T NKSE++VGY TL Sbjct: 351 FESFLTTLSDQFTGLPVDTTEENIQARCRGIILMALSNKTGSMVLATGNKSEMAVGYSTL 410 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GG++PLKD+YKT V+QL+ +RN+ + VIP I+ + PSAEL Q Sbjct: 411 YGDMAGGYSPLKDVYKTMVYQLSHYRNTRSM---------VIPERIITRPPSAELAADQL 461 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R + ++ F + E Y+ E V V ++ +EYKRRQAP G + Sbjct: 462 DQDSLPPYELLDKILERYIADDSCFEDLVAEGYDAEVVARVIKMVDRNEYKRRQAPPGIR 521 Query: 538 ITAKSFGRDRLYPISNKF 555 I++++FGRDR YPI++ + Sbjct: 522 ISSRAFGRDRRYPITSGY 539 >gi|83648563|ref|YP_436998.1| NAD synthase [Hahella chejuensis KCTC 2396] gi|83636606|gb|ABC32573.1| NAD synthase [Hahella chejuensis KCTC 2396] Length = 546 Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust. Identities = 237/557 (42%), Positives = 341/557 (61%), Gaps = 20/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKK 60 + +LK+A AQ++ +VGDI GN+ K A E A + DL++F EL ++GYPPEDL+ + Sbjct: 5 MTQLKVAFAQIDCLVGDIPGNVDKVIEAAETAKTKYNADLVIFPELTLTGYPPEDLLLRA 64 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A++ + D +V+GFP ++Q + N +D G I A K LPNY Sbjct: 65 SLQVRVEKALERILYTVKD--IALVIGFPWREQGKLFNCAAFIDGGEIKAKYRKKCLPNY 122 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + +R LG+ ICED+W+ I A+F+ ++NASPY Sbjct: 123 QVFDEKRYFEPGSDTVVLPWRGFNLGVSICEDVWEEEPIAATAAAG-ADFIVNINASPYD 181 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL++R +V + +PI+YVN +GGQDELIFDG SF + ++ F F E Sbjct: 182 IAKLQQRRTLVQSRAVTNSVPILYVNMIGGQDELIFDGGSFAVNRHGRVCFSAPQFEEGI 241 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 F+ E + + + + A TM + E + Y A V +RDYV KN F V+IGLS Sbjct: 242 FLLE--LNDVIHGEGQETAEPAPTMAV----EASIYKALVTGVRDYVNKNRFKSVVIGLS 295 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A+AVDA+G + V+ +M+P++YTS SLEDA A AKALG +Y+V+PI + + Sbjct: 296 GGIDSAVTLAVAVDAIGADRVRAVMMPFRYTSQMSLEDAEAEAKALGVQYEVVPIEPIYD 355 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ ENIQ+RIRG ILM +SN + A++LTT NKSE++VGY TLYG Sbjct: 356 QFMGALNPLFAGLDRDTTEENIQARIRGVILMGISNKTGALVLTTGNKSEMAVGYATLYG 415 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG++ LKD++KT VF+LA +RN+ L+ VIP ++ + PSAEL P Q D+ Sbjct: 416 DMAGGYDVLKDVFKTMVFRLAWYRNT---------LSPVIPERVITRPPSAELAPDQKDE 466 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD+I+ VE++ S + ++ ETV V L+ +EYKRRQAP+G +IT Sbjct: 467 DSLPPYEILDEILSLYVEHDVSADGIVAKGFDKETVYRVVRLVDINEYKRRQAPIGARIT 526 Query: 540 AKSFGRDRLYPISNKFR 556 + FGRDR YPI++ ++ Sbjct: 527 MRGFGRDRRYPITSGWK 543 >gi|294084249|ref|YP_003551007.1| glutamine-dependent NAD(+) synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663822|gb|ADE38923.1| Glutamine-dependent NAD(+) synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 561 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 247/565 (43%), Positives = 346/565 (61%), Gaps = 27/565 (4%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K + IA+AQLN +G+IA N+ ARE+AN G D+I+ E+F+SGYP +DLV + F Sbjct: 4 KPISIALAQLNSHLGNIAANVECLIDAREKANAGGADIIVTPEMFLSGYPCDDLVLRSDF 63 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 + ++ I L T DGGA I+VG P ++Q+G + NSV +LD G II RDK+NLP Sbjct: 64 MHEVAAGIARLTQVTADGGAAIIVGAPYREQDGDVVRIYNSVFVLDDGKIIGRRDKVNLP 123 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F +KR F +G P++ R ++LG+ +CEDIW ++ + L++ GA+ + SLNASP Sbjct: 124 NYGVFDDKRNFTAGAMPGPVLVRGLKLGLPVCEDIW-TPDVVECLQESGADMIVSLNASP 182 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + K +R + LP++YVN +GGQDEL+FDG SF + LA + FS Sbjct: 183 FDSRKNDQRMAHAVSRTIESSLPLLYVNLIGGQDELVFDGGSFALNADGNLATHLPSFS- 241 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMY----IPLQEEEADYNACVLSLRDYVQKNNFHK 294 Q + Q SD A ++ P ++ A Y +L +RDYVQKN F Sbjct: 242 ----------QAVVQVQVKSDFGALSLTGQITPPDEDLAAIYRGLMLGVRDYVQKNGFPG 291 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++GLSGGIDSAL AAIA DALG + V +M+P YTS +SLEDAA A G + D + Sbjct: 292 VVLGLSGGIDSALVAAIAADALGADAVHAVMMPSPYTSDESLEDAADLASRFGMRLDTIS 351 Query: 355 IHDLVNHFFSLMS-QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I + +++ QF ++P I ENIQSR+RG ILM +SN + AM++ T NKSE + Sbjct: 352 IGPAMAAMDEMLADQFAGKDPD-IAEENIQSRLRGTILMGISNKNGAMVMATGNKSEYAA 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDM GGF P+KD++K QVF L WRN++ GP EVIP I++K PSAEL Sbjct: 411 GYSTLYGDMCGGFAPIKDVWKVQVFDLCHWRNANLPRGAAGPEGEVIPKRIIDKPPSAEL 470 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 RP Q D +SLPPY LD I++ + E+ ++ + Q Y+ + V LL+ +E+KR Sbjct: 471 RPDQKDTDSLPPYERLDAIMQALTEDAADIDAIVA--QGYDIKEVAQASQLLFRAEFKRF 528 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QA G K+T+ +FGRDR P+++ F Sbjct: 529 QAAPGPKMTSIAFGRDRRLPLTSGF 553 >gi|296136241|ref|YP_003643483.1| NAD+ synthetase [Thiomonas intermedia K12] gi|295796363|gb|ADG31153.1| NAD+ synthetase [Thiomonas intermedia K12] Length = 560 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 243/570 (42%), Positives = 333/570 (58%), Gaps = 31/570 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A+ Q NP VGD+AGN A+ R +A QG +++ EL ++GYPPEDL+ + +F+Q Sbjct: 3 LQLAVIQCNPTVGDLAGNAAQIARLTRQAYAQGARVVVTPELALTGYPPEDLLLRPAFLQ 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFP------------RQDQEGVLNSVVILDAGNIIAV 111 A ++A+ L D D +VVG P Q N+ +L G + A Sbjct: 63 ASAAALKQLAHDLSDLPELALVVGHPLGLAAAEAPRIASTQQAVACNAASLLRGGVVEAT 122 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAE 169 K LPNY F E+R F G + P+VF GI ICED W + + + GA+ Sbjct: 123 YCKHELPNYQVFDERRYFAPG--DQPVVFEAGGTHFGINICEDAWL-PHAPRMARAAGAQ 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L LNASPY+ K +R ++ + + ++ VGGQDE++FDGASF D +L Sbjct: 180 VLLVLNASPYHRGKTAERERVMRERCLENGMALVASQMVGGQDEIVFDGASFVLDHAGEL 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQ 288 + F E + + L Q PL+ + A+ Y A VL +RDY+ Sbjct: 240 VARSPQFVEDILRVDVTGGEVLKQ--------TPAHVAPLKSDHAEVYAALVLGVRDYLG 291 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 KN F +IGLSGG DSAL AIAVDALG E V+ +M+P +YT+ SL+DAA A+ LG Sbjct: 292 KNGFPGALIGLSGGADSALVLAIAVDALGAEKVRAVMMPSQYTAQISLDDAAEMAQRLGV 351 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +YDVLPI L F + ++ L E P ENIQ+RIRG +LM LSN+S ++LTT NK Sbjct: 352 QYDVLPITPLFETFRTTLAPLLHEHPGDTTLENIQARIRGTLLMGLSNNSGRIVLTTGNK 411 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE+++GY TLYGDM+GGF +KD+ KT V++LA WRN+H G EVIP I+ ++ Sbjct: 412 SEMAMGYATLYGDMAGGFAVIKDVTKTLVWELARWRNAHAAAMG---EAEVIPQRIITRA 468 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEY 527 PSAELR QTDQ+SLPPY +LD I++R +E +E Y V V HLL SEY Sbjct: 469 PSAELRADQTDQDSLPPYDVLDGILQRYMEQDERVETVLAAGYARADVERVVHLLKLSEY 528 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 KRRQAP G ++T ++FGRD YPI++KFR+ Sbjct: 529 KRRQAPPGIRVTHRAFGRDWRYPITSKFRE 558 >gi|308048511|ref|YP_003912077.1| NAD+ synthetase [Ferrimonas balearica DSM 9799] gi|307630701|gb|ADN75003.1| NAD+ synthetase [Ferrimonas balearica DSM 9799] Length = 539 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 239/556 (42%), Positives = 334/556 (60%), Gaps = 23/556 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K+L +A+AQLN VG I N K +A +QG DL+LF EL ++GYPPEDL+ + Sbjct: 1 MSKQLVVALAQLNLTVGAIEDNAQKCLEWAAKAEQQGADLVLFPELALTGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 A+ L++ + G I+VG P +EG+ N ++ G I+ DK LPNY Sbjct: 61 DCQARVDEALAQLQA--YSGDIAILVGHPAMTEEGLRNRASLIHQGAILGHVDKQRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F + I F+ +LG+LICEDIW + K + QGA+ L +LNASP+ Sbjct: 119 RVFDEERYFEPADHSAVIPFKGHQLGVLICEDIWHPEPV-KQVTDQGADLLLTLNASPFD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +KL +R +++ + L ++Y+NQV GQDELIFDG S D + ++ F E Sbjct: 178 MSKLTERLDVLEACTAESGLAVVYLNQVCGQDELIFDGHSLVMDATGHICHELPQFEES- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 QL ++ D +P Q+ + YNA VL++RDYV KN F ++GLS Sbjct: 237 --------LQLVRFTDGQPDQGERHPLPSQDAQV-YNALVLAVRDYVGKNGFKGAVLGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DALG + VQ +M+P+KYTS S+EDA A A+ALG YDV+ I + + Sbjct: 288 GGIDSALTLAIAADALGADKVQAVMMPFKYTSSMSVEDARAQAEALGVTYDVVSIEPMFD 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + EN+Q+R RG +LMALSN S +LLTT NKSE++VGY TLYG Sbjct: 348 AFMGQLAPMFEGTQKDTTEENLQARARGVLLMALSNKSGKILLTTGNKSEMAVGYCTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF +KDL K V++L+ +RN+ L+EVIP ++ + PSAEL P Q DQ Sbjct: 408 DMCGGFAVIKDLPKLLVYRLSRYRNT---------LSEVIPERVITRPPSAELAPDQVDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LDDI++R VE ++S + + VR V L +EYKRRQA VG ++T Sbjct: 459 DSLPPYDVLDDILERYVERDQSLEEIVAAGHREADVRRVIRLTDINEYKRRQAAVGPRVT 518 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 519 PRAFGKDRRYPITSGF 534 >gi|86139281|ref|ZP_01057851.1| NAD(+) synthase [Roseobacter sp. MED193] gi|85824125|gb|EAQ44330.1| NAD(+) synthase [Roseobacter sp. MED193] Length = 552 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 246/558 (44%), Positives = 347/558 (62%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQ+NP VGD+AGN AKAR A E DL+ E+F++GY +DLV K Sbjct: 1 MADRFRVTLAQMNPTVGDLAGNAAKARTAWAEGRAASADLVALPEMFLTGYNTQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA +A + L D DG A + +G P + + N+ +IL G I + K +LPN Sbjct: 61 VFQQAAMAAAEQLALDCADGPA-LAIGCPWAEGGKLYNAYLILKDGKIASRCLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P D R+G ICED W + ++ + L++ GAEFL N SPYY Sbjct: 120 TVFDEVRIFDAGPLGGPYAVGDTRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R + + LP+IY+N VGGQD+ +FDG +F + LA QM F E Sbjct: 179 RNKMEVRQNHMVARAVETGLPVIYLNLVGGQDDQVFDGGTFVLNPNGALALQMPVFDEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T+ + W + D A ++P E+ DY V SLRDY+ K F K ++GLS Sbjct: 238 -VTQLDLHRTPEGWRAVEGDKA---HLPDVWEQ-DYRTMVESLRDYMGKTGFKKALLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDA+G ENV+ +MLP +YTS +SL+DA A A+ALG YD +PI + + Sbjct: 293 GGVDSAIVAAIAVDAIGAENVRCVMLPSEYTSRESLDDAEAVAEALGVHYDYVPIAEGRD 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFNGREEDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI P++++K PSAELR Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNANHRPWMMGPAGEVIRPNVIDKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I++ +V+ E S + + + ETV+ VEHL+Y SEYKR Q+ G +++ Sbjct: 473 DSLPDYPELDAILEILVDQEGSVADCVAKGFARETVKRVEHLIYISEYKRFQSAPGARLS 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N+FRD Sbjct: 533 PRAFWLDRRYPIVNRFRD 550 >gi|220933990|ref|YP_002512889.1| NAD+ synthetase [Thioalkalivibrio sp. HL-EbGR7] gi|219995300|gb|ACL71902.1| NAD+ synthetase [Thioalkalivibrio sp. HL-EbGR7] Length = 546 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 236/565 (41%), Positives = 341/565 (60%), Gaps = 34/565 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKAR----RAREEANRQGMDLILFTELFISGYPPEDL 56 M LKIA+AQ++ +VGD+ GN + R +AR+E G DL+LF EL I+GYPPEDL Sbjct: 1 MTDTLKIALAQVDLLVGDVEGNAERIRDWVFKARDEL---GADLVLFPELAITGYPPEDL 57 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 + + S A+ L + G +V+G P QD+ G+ NS ++L G I A DK Sbjct: 58 LLRASLHARVERALHRLAHEVR--GIDVVLGAPMQDERGLHNSALLLRDGAIAARYDKQI 115 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNYS F EKR F+ G+ I R + LG+ +CEDIW+ + + A + ++NA Sbjct: 116 LPNYSVFDEKRYFVPGHGACVIQVRGVPLGLTVCEDIWQPEPAARAREAG-ARLILNINA 174 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ K ++R + + ++ L ++Y+N VGGQDEL+FDG S G ++ Sbjct: 175 SPYHRGKREERLQTLRARVRETGLSVLYLNLVGGQDELVFDGQSLVMGGDGEV------- 227 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSA----STMYIPLQEEEAD-YNACVLSLRDYVQKNN 291 + + WH L + + D+ + PL +E A+ Y A V +RDYV KN Sbjct: 228 --RQSLPAWHEALSLVSVDCPAGDAPLQPRAGEQAPLADEAAELYQALVTGVRDYVSKNG 285 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F ++GLSGGIDSAL IAVDALG + V+ +M+PY+YT+ S+EDA + A++LG +Y Sbjct: 286 FRGAVLGLSGGIDSALTLCIAVDALGADAVEAVMMPYRYTASMSVEDARSQAQSLGVRYR 345 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 +PI +V F + ++ + P ENIQ+R RG ILMA+SN + MLLTT NKSE+ Sbjct: 346 EIPIEPMVEAFMTGLAPEFEGLPRDTTEENIQARCRGVILMAISNKTGRMLLTTGNKSEM 405 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GGF PLKD+ K VF+LA +RN+ G IP ++E+ PSA Sbjct: 406 AVGYATLYGDMAGGFAPLKDVSKLWVFRLAEYRNTLGAA---------IPRRVIERPPSA 456 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRR 530 EL P Q D +SLPPY +LD I++R VE ++S + +++ TV+ V L+ +EYKRR Sbjct: 457 ELAPGQQDSDSLPPYEVLDPILERFVEQDQSVEQIVRAGFDEATVQRVATLVLRNEYKRR 516 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QAP G ++T + FG+DR YPI++ + Sbjct: 517 QAPPGVRVTRRGFGKDRRYPITSGY 541 >gi|197285726|ref|YP_002151598.1| NAD synthetase [Proteus mirabilis HI4320] gi|194683213|emb|CAR43877.1| glutamine-dependent NAD(+) synthetase [Proteus mirabilis HI4320] Length = 538 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/562 (43%), Positives = 339/562 (60%), Gaps = 30/562 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAK---ARRAREEANRQGMDLILFTELFISGYPPEDLV 57 M +KLK+A+AQLN VVGDI GN + +A+E+A DL+LF+EL + GY PEDL+ Sbjct: 1 MSRKLKLALAQLNWVVGDIEGNCERMLATVKAQEDA-----DLVLFSELALCGYSPEDLL 55 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F+ F Q C + L+ + IVVG P + N++ G + A K L Sbjct: 56 FRPDFQQRCEEQLVRLEQASKK--TAIVVGHPWWQNGTIYNALSFFYQGELQARYFKQQL 113 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F EKR F G + F+ LG+LICEDIW N I LK+ GA+ + S+NAS Sbjct: 114 PNYGVFDEKRYFQQGNERCVVPFKGYHLGLLICEDIWINEPI-DALKQAGADLVLSINAS 172 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K R +++ HLP++Y+NQ+GGQDEL+FDG S FD + + ++ F Sbjct: 173 PYSREKPHIRTQLIKEHCQRTHLPVVYLNQIGGQDELVFDGCSKVFDERGTITHRLAAFD 232 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 EQ + E+ + + A+ PL + Y A VL+ RDYV KN F I+ Sbjct: 233 EQVAVVEF------DELTIVPMQDAAPELSPLAQV---YQALVLATRDYVTKNGFKGAIL 283 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDS L AIAVDALGKE+VQ +M+P++YTS S+ DA A LG ++D + I Sbjct: 284 GLSGGIDSGLTVAIAVDALGKESVQAVMMPFRYTSEMSIHDAKEQANLLGVEFDTVSIEP 343 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + F +S + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY T Sbjct: 344 MFDAFMDQLSPMFKGSAVDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYST 403 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF+ LKD+ KT VF+LA +RN+ L+ IP ++++ PSAEL P Q Sbjct: 404 LYGDMAGGFDVLKDVPKTLVFELAKYRNT---------LSPAIPQRVIDRPPSAELAPGQ 454 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ++LPPY ILD +++ VE ++S + +++ VR V L+ +EYKRRQAPVG Sbjct: 455 TDQDNLPPYDILDALLEGYVEQDKSVSDLVAAGFDEAIVRKVVKLVDINEYKRRQAPVGP 514 Query: 537 KITAKSFGRDRLYPISNKFRDH 558 +IT+++FG+DR YPI++ F H Sbjct: 515 RITSRNFGKDRRYPITSGFGRH 536 >gi|227356237|ref|ZP_03840626.1| glutamine-dependent NAD(+) synthetase [Proteus mirabilis ATCC 29906] gi|227163701|gb|EEI48617.1| glutamine-dependent NAD(+) synthetase [Proteus mirabilis ATCC 29906] Length = 538 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 242/562 (43%), Positives = 339/562 (60%), Gaps = 30/562 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAK---ARRAREEANRQGMDLILFTELFISGYPPEDLV 57 M +KLK+A+AQLN VVGDI GN + +A+E+A DL+LF+EL + GY PEDL+ Sbjct: 1 MSRKLKLALAQLNWVVGDIEGNCERMLATVKAQEDA-----DLVLFSELALCGYSPEDLL 55 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F+ F Q C + L+ + IVVG P + N++ G + A K L Sbjct: 56 FRPDFQQRCEEQLVRLEQASKK--TAIVVGHPWWQNGTIYNALSFFYQGELQARYFKQQL 113 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F EKR F G + F+ LG+LICEDIW N I LK+ GA+ + S+NAS Sbjct: 114 PNYGVFDEKRYFQQGNERCVVPFKGYHLGLLICEDIWINEPI-DALKQAGADLVLSINAS 172 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K R +++ HLP++Y+NQ+GGQDEL+FDG S FD + + ++ F Sbjct: 173 PYSREKPHIRTQLIKEHCQRTHLPVVYLNQIGGQDELVFDGCSKVFDERGTITHRLAAFD 232 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 EQ + E+ + + A+ PL + Y A VL+ RDYV KN F I+ Sbjct: 233 EQVAVVEF------DELTIVPMQDAAPELSPLAQV---YQALVLATRDYVTKNGFKGAIL 283 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDS L AIAVDALGKE+VQ +M+P++YTS S+ DA A LG ++D + I Sbjct: 284 GLSGGIDSGLTVAIAVDALGKESVQAVMMPFRYTSEMSIHDAKEQADLLGVEFDTVSIEP 343 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + F +S + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY T Sbjct: 344 MFDAFMDQLSPMFKGSAIDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYST 403 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF+ LKD+ KT VF+LA +RN+ L+ IP ++++ PSAEL P Q Sbjct: 404 LYGDMAGGFDVLKDVPKTLVFELAKYRNT---------LSPAIPQRVIDRPPSAELAPGQ 454 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ++LPPY ILD +++ VE ++S + +++ VR V L+ +EYKRRQAPVG Sbjct: 455 TDQDNLPPYDILDALLEGYVEQDKSVSDLVAAGFDEAIVRKVVKLVDINEYKRRQAPVGP 514 Query: 537 KITAKSFGRDRLYPISNKFRDH 558 +IT+++FG+DR YPI++ F H Sbjct: 515 RITSRNFGKDRRYPITSGFGRH 536 >gi|294340476|emb|CAZ88857.1| Glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) [Thiomonas sp. 3As] Length = 560 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 241/570 (42%), Positives = 332/570 (58%), Gaps = 31/570 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A+ Q NP VGD+AGN A+ R +A QG +++ EL ++GYPPEDL+ + +F+Q Sbjct: 3 LQLAVIQCNPTVGDLAGNAAQIARLTRQAYAQGARVVVTPELALTGYPPEDLLLRPAFLQ 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFP------------RQDQEGVLNSVVILDAGNIIAV 111 A ++A+ L D D +VVG P Q N+ +L G + A Sbjct: 63 ASAAALKQLAHDLSDLPELALVVGHPLGLAAAEAPRIASTQQAVACNAASLLRGGVVEAT 122 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAE 169 K LPNY F E+R F G + P+VF GI ICED W + + + GA+ Sbjct: 123 YCKHELPNYQVFDERRYFAPG--DQPVVFEAGGTHFGINICEDAWL-PHAPRMARAAGAQ 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L LNASPY+ K +R ++ + + ++ VGGQDE++FDGASF D +L Sbjct: 180 VLLVLNASPYHRGKTAERERVMRERCLENGMALVASQMVGGQDEIVFDGASFVLDRAGEL 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQ 288 + F E + + L Q PL+ + A+ Y A VL + DY+ Sbjct: 240 VARSPQFVEDILRVDVTGGEVLKQ--------TPAHVAPLKSDHAEVYAALVLGVHDYLG 291 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 KN F +IGLSGG DSAL AIAVDALG + V+ +M+P +YT+ SL+DAA A+ LG Sbjct: 292 KNGFPGALIGLSGGADSALVLAIAVDALGADKVRAVMMPSQYTAQMSLDDAAEMAQRLGV 351 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +YDVLPI L F + ++ L E P ENIQ+RIRG +LM LSN+S ++LTT NK Sbjct: 352 RYDVLPITPLFETFRTTLAPLLHEHPGDTTLENIQARIRGTLLMGLSNNSGRIVLTTGNK 411 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE+++GY TLYGDM+GGF +KD+ KT V++LA WRN+H G EVIP I+ ++ Sbjct: 412 SEMAMGYATLYGDMAGGFAVIKDVTKTLVWELARWRNAHAAAMG---EAEVIPQRIITRA 468 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEY 527 PSAELR QTDQ+SLPPY +LD I++R +E +E Y V V HLL SEY Sbjct: 469 PSAELRADQTDQDSLPPYDVLDGILQRYMEQDERVETVLAAGYARADVERVVHLLKLSEY 528 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 KRRQAP G ++T ++FGRD YPI++KFR+ Sbjct: 529 KRRQAPPGIRVTHRAFGRDWRYPITSKFRE 558 >gi|71906925|ref|YP_284512.1| NAD synthetase [Dechloromonas aromatica RCB] gi|71846546|gb|AAZ46042.1| NH(3)-dependent NAD(+) synthetase [Dechloromonas aromatica RCB] Length = 538 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 234/557 (42%), Positives = 334/557 (59%), Gaps = 24/557 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQ N VGD+ GN+ + + EA +G ++L EL + GYPPEDL+ + F + Sbjct: 2 LRIAVAQFNATVGDLTGNVERIIKCASEAKVRGAQVLLTPELALCGYPPEDLLLRPDFYR 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+D L S G +VVG P + + N+ +++ G AV K+ LPNY F Sbjct: 62 ACQRALDNLVSRVE--GIAVVVGHPEEHEGRCYNAATVIENGRSKAVYRKMRLPNYEVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + +R GI IC DIW+ + + + GAE L LNASP + K Sbjct: 120 EKRYFEPGTEACVVTLAGVRCGINICADIWE-AGAAELAHEAGAELLLVLNASPCHLEKH 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R +++ +I +P +Y N VGGQDEL+FDGASF D ++ ++ F E + + Sbjct: 179 QQRIQVLGDRIDATGIPAVYCNLVGGQDELVFDGASFALDARKNCCMRLPQFEEALGIVD 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + SDD A + + E EA Y A V+ +RDY+ K F IIGLSGGID Sbjct: 239 F------DAGRLHSDDMADELSL---EAEA-YKALVVGVRDYIGKTGFKGAIIGLSGGID 288 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL +AVDALG + V+ +M+P YT+ SL+D+ + LG +YD + I + + + Sbjct: 289 SALTLCVAVDALGADKVRAVMMPSPYTAQMSLDDSREMIRVLGVQYDEIAIAPAMEVYGA 348 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ P+ ENIQ+RIRGNILMALSN + A++LTT NKSE++VGY TLYGDM+G Sbjct: 349 MLDPLFAGLPADTTEENIQARIRGNILMALSNKTGALVLTTGNKSEMAVGYCTLYGDMAG 408 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF +KD+YKT V++L+ +RN+ + G VIP +I+ + PSAEL+P QTDQ+SLP Sbjct: 409 GFAVIKDVYKTLVYRLSVYRNT--LCQG----DPVIPENIIVRPPSAELKPDQTDQDSLP 462 Query: 485 PYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 PY ILD I++ +E + S I + D VR V LL +EYKRRQAP+G +IT + Sbjct: 463 PYEILDAIVRAYMEEDRSPREIIAAGLQEAD--VRRVVRLLRIAEYKRRQAPIGIRITPR 520 Query: 542 SFGRDRLYPISNKFRDH 558 FG+D YPI+N++ D Sbjct: 521 GFGKDWRYPITNRYADE 537 >gi|163735249|ref|ZP_02142684.1| NAD synthetase [Roseobacter litoralis Och 149] gi|161391463|gb|EDQ15797.1| NAD synthetase [Roseobacter litoralis Och 149] Length = 541 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 235/548 (42%), Positives = 327/548 (59%), Gaps = 9/548 (1%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAID 71 +NP VGD+AGN A AR G DL+ E+FI+GY +DLV K +F I+ Sbjct: 1 MNPTVGDLAGNAAIAREVWAAGKAAGADLVALPEMFIAGYNAQDLVMKPAFQLDAMRHIE 60 Query: 72 TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFIS 131 L D DG + +G P + + N+ +IL G I++ K +LPN + F E R F + Sbjct: 61 ALAQDCADGPT-LAIGSPWVEGTKLYNAYLILKGGKIVSQVLKHHLPNETVFDEVRIFDA 119 Query: 132 GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV 191 G P + R+G ICED W + ++ + L + GAEFL N SPYY K + R + Sbjct: 120 GPLGGPYSVGNSRVGSPICEDAW-HEDVAETLAETGAEFLLVPNGSPYYRGKFETRLNHM 178 Query: 192 TGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQL 251 ++ LP+IY+N VGGQD+ +FDGASF + LA Q+ F E + ++ Sbjct: 179 VARVIETELPLIYLNMVGGQDDQVFDGASFGLNPGGNLAVQLPAFDEA--VAHVDLERGP 236 Query: 252 SQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 W + + A + P E DY V +LRDY +K F KV++GLSGG+DSAL A I Sbjct: 237 EGWRIVEGEKA---HHP-DAWEQDYRVMVQALRDYCRKTGFGKVLLGLSGGVDSALVATI 292 Query: 312 AVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 AVDA G +NV+ +MLP +YTS +SLEDA A AKALGC YD +PI + ++ + Sbjct: 293 AVDAFGAQNVRCVMLPSEYTSAESLEDAEAVAKALGCHYDYVPITEGRAAVEQTLAPLFE 352 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YGDM+GG+NP+KD Sbjct: 353 GHDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYGDMAGGYNPIKD 412 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 LYKT+VF+ WRN + + GP EVI P +++K PSAELR Q D +SLP YP LD Sbjct: 413 LYKTRVFETCRWRNKNHRSWMEGPDGEVITPRVIDKPPSAELREDQKDSDSLPDYPELDR 472 Query: 492 IIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 +++ +V+ S + +D ET + +EHL+Y SEYKR Q+ G ++T +F DR YP Sbjct: 473 LLEILVDRNGSIEDCVAAGSDAETAKKIEHLIYISEYKRFQSAPGARLTKGAFWLDRRYP 532 Query: 551 ISNKFRDH 558 I N++RD Sbjct: 533 IVNRWRDR 540 >gi|297537993|ref|YP_003673762.1| NAD+ synthetase [Methylotenera sp. 301] gi|297257340|gb|ADI29185.1| NAD+ synthetase [Methylotenera sp. 301] Length = 537 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 244/555 (43%), Positives = 333/555 (60%), Gaps = 29/555 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+N +VGDIAGN+AK A + G L++ EL + GYPPEDL+ ++ F+Q Sbjct: 1 MKIAIAQMNCLVGDIAGNVAKIMANAALAKQHGATLMVTPELSLCGYPPEDLLLREDFLQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A++ L + D ++VG PRQ + N+ +L G + A K LPNYS F Sbjct: 61 ACDAALEKLSTALTD--ITVIVGHPRQVGDECFNAASVLKDGEVFATYHKHALPNYSVFD 118 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 EKR F +G +P+VF +++G+LIC D+W+ N K GAE L +LNASP++ Sbjct: 119 EKRYFTAG--GEPLVFEHCGVQIGVLICADVWE-PNPATLAKAAGAEVLIALNASPFHME 175 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R EI+ + S L IIY N VGGQDEL+FDGASF + L Q+ F Sbjct: 176 KQSTRLEILRERASETDLAIIYTNMVGGQDELVFDGASFVLNSNGDLTQQLPAF------ 229 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D L +M P L E + Y A L L+DYV+KN F V++GLSG Sbjct: 230 -----DAALEIVEFMGLQPIPAAVTPQLSIEASVYTALKLGLQDYVRKNGFPGVVLGLSG 284 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 G+DSAL AIAVDALG E VQ +M+P ++T+ S+ DAA AK LG KY +PI +L Sbjct: 285 GVDSALTMAIAVDALGAEKVQAVMMPSEFTADISVNDAAEMAKLLGVKYSQMPIANLYES 344 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F ++ + P EN+Q+RIRG +LMA+SN ++++TT NKSE +VGY TLYGD Sbjct: 345 FRVALADEFKGLPFDTTEENLQARIRGMLLMAISNKFGSIVVTTGNKSETAVGYCTLYGD 404 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF LKD+ KT V++L +RNS L+ IP I+ + PSAELR +Q DQ+ Sbjct: 405 MAGGFALLKDVPKTLVYRLCDYRNS---------LSRAIPQRIITRPPSAELRANQLDQD 455 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LD II+ VE+ S + Y+ V V L+ +EYKRRQ+PVG +IT Sbjct: 456 SLPPYDVLDVIIEAYVEDNLSARDIIAMGYSSTDVNRVITLIDRNEYKRRQSPVGVRITH 515 Query: 541 KSFGRDRLYPISNKF 555 + FG+DR +PI+ K Sbjct: 516 RGFGKDRRHPITVKL 530 >gi|290476027|ref|YP_003468924.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Xenorhabdus bovienii SS-2004] gi|289175357|emb|CBJ82160.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Xenorhabdus bovienii SS-2004] Length = 540 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 235/556 (42%), Positives = 336/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L I +AQLN +VGDI GN + + +E ++G DL++F+EL +SGY PEDL+F+ Sbjct: 1 MSRTLNIVLAQLNWLVGDIEGNSERMLQTVQEQQKKGADLVMFSELALSGYFPEDLLFRA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Q C + L+ + I+VG P Q N++ + G IIA K LPNY Sbjct: 61 DLHQRCREQLVRLQEASSQ--VAILVGHPWQQDGKTYNALSLFWKGEIIARYFKQLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + + F+ LG+LICED+W ++ I LK+ G++ + SLNASPY Sbjct: 119 GVFDEDRYFKAGDQSCVVPFKGYNLGLLICEDLWFDAPI-DALKQAGSDIILSLNASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LPIIY+NQVGGQD+LIFDG S FD ++ +M F EQ Sbjct: 178 REKPNIRSTLIQSHCQRTQLPIIYLNQVGGQDQLIFDGCSKVFDANGKITHRMAAFEEQI 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++N M+ + + + L Y A VLS+RDYV KN F ++GLS Sbjct: 238 ---------EQCRFNEMNIEPMANLIPQLSPLAQIYKALVLSVRDYVHKNGFKGALLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGK++VQ +M+P++YTS S+ DA A+ LG ++DV+ I + + Sbjct: 289 GGIDSGLTLAIAVDALGKDHVQAVMMPFRYTSEMSIHDAREQAELLGVEFDVVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 349 AFMAQLEPMFAGTEKDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF L+ +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFNALKDVPKTMVFALSKYRNT---------VSPAIPQRVIDRPPSAELAPDQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ VE ++S + Q +++ VR V L+ +EYKRRQAP+G +IT Sbjct: 460 DSLPPYDMLDAILEGYVEKDKSVADLVAQGFDEAIVRKVIRLVDINEYKRRQAPIGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 + FG+DR YPI++ F Sbjct: 520 ERDFGKDRRYPITSGF 535 >gi|126724772|ref|ZP_01740615.1| NAD synthetase [Rhodobacterales bacterium HTCC2150] gi|126705936|gb|EBA05026.1| NAD synthetase [Rhodobacterales bacterium HTCC2150] Length = 552 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 241/563 (42%), Positives = 328/563 (58%), Gaps = 17/563 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K +I +AQLNP +GD+ N KAR A D + E+F++GY +DL + Sbjct: 1 MAEKFRITLAQLNPTLGDLTQNATKAREAWAAGKAANADFVALPEMFLTGYQLQDLAMRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ + + L +D DG A + +G P N +IL G I K +LP Sbjct: 61 AFLADVADVLKGLAADVADGPA-LGIGAPMIVDGKRHNCYLILQNGEIATQVLKHHLPID 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F SG + P +R+G ICED W + H + GAE LF N SPY Sbjct: 120 DVFDEARIFASGDVSGPYRIGPLRIGSPICEDAWFDDVTETH-AESGAEILFVPNGSPYM 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ ++ LP+IY+N VGGQD+ +FDGASF + LA QMK E Sbjct: 179 RAKQDHRIALMVARVVETGLPLIYLNLVGGQDDQVFDGASFALNRGGALAAQMKTLDEDI 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQ----EEEADYNACVLSLRDYVQKNNFHKVI 296 H D +L D+ + PL+ E E DYN V +LRDY+ K F KV+ Sbjct: 239 C----HLDLELG------DEGWTIKQGPLEPRPDEYEQDYNVMVTALRDYMGKTGFKKVL 288 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +G+SGGIDSAL A IAVDALG ENV+ +MLP +YTS SLEDA A+ALG + D LPI Sbjct: 289 LGMSGGIDSALVATIAVDALGPENVRCVMLPSEYTSSHSLEDAEKAARALGVRMDTLPIA 348 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 ++ + + ENIQSR+RG +LMALSN MLLTT NKSE++VGY Sbjct: 349 GPRAAVTEALAPLFEGTKPDLTEENIQSRLRGLMLMALSNKFGEMLLTTGNKSEVAVGYA 408 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NP+KDLYK +VFQ WRN + LGP EVIP I++K PSAELR Sbjct: 409 TIYGDMAGGYNPIKDLYKMRVFQTCRWRNENHRDWMLGPQAEVIPQRIIDKPPSAELRDD 468 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D++SLPPY +LD I++ +V+ + S + ++ ETV+ +EHL+Y SE+KR Q+ G Sbjct: 469 QKDEDSLPPYEVLDAILEMLVDQDFSVADVVAAGFDRETVKRIEHLIYISEHKRFQSAPG 528 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 ++T ++F DR YPI N++RD+ Sbjct: 529 ARLTGRAFWLDRRYPIVNRWRDN 551 >gi|148653679|ref|YP_001280772.1| NAD+ synthetase [Psychrobacter sp. PRwf-1] gi|148572763|gb|ABQ94822.1| NAD+ synthetase [Psychrobacter sp. PRwf-1] Length = 552 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 240/552 (43%), Positives = 331/552 (59%), Gaps = 19/552 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK A+AQ + +VGDI NI K R EA G D+I+F EL + GYPPEDL+ + S Sbjct: 15 LKFAMAQSHFMVGDIQTNIDKMRSLAIEARDNGADVIVFPELALLGYPPEDLLLRPSLSD 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ +L SD +D +++G+P D G NS I+ G K LPNY F Sbjct: 75 RVKAALSSL-SDIND--IVMIIGYPHVDYHGTFNSAAIIQNGQQKGFYHKQYLPNYGVFD 131 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G + ++ + +G+LICED+W+ I K LK QGA+ + ++NASP+ K Sbjct: 132 ERRYFDKGRNQVLFDYQGVTIGLLICEDLWQEEPI-KALKDQGADLVVTINASPFEAGKQ 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R ++ + + LPIIYVN VGGQD+L+FDG S +A + F E M Sbjct: 191 HTRQALLNKRATDNQLPIIYVNAVGGQDDLVFDGGSMAIQANGDVAHEAPRFLEH--MLY 248 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 YD + + DS + + L E Y A V+ LRDYV + F VI+GLSGGID Sbjct: 249 ATYDIKNHTF-----DSQTKAPLQLSSESETYQALVVGLRDYVNHSGFEGVIVGLSGGID 303 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL +AVDALG + V +M+PY+YTS SLEDA A A+ L Y V PIHD V+ Sbjct: 304 SALTLCVAVDALGSDKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIHDAVDGMRH 363 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + + ENIQ+R RG +LMALSN +++TT NKSE++VGY TLYGDM+G Sbjct: 364 TLAPLFSKAKADTTEENIQARARGMVLMALSNKFGHLVITTGNKSEMAVGYATLYGDMAG 423 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF+ LKD+YKTQV+ LA++RN T+ VIP ++ + PSAELRP Q DQ+SLP Sbjct: 424 GFDVLKDVYKTQVYALANYRNRLEDTN-------VIPERVITRPPSAELRPDQVDQDSLP 476 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y +LD I+K ++N+ F + ++ E VR+V L+ SEYKRRQA +GTKI+ K+F Sbjct: 477 DYDLLDAILKDYIDNDLGFNEITAKGFDPEVVRHVIKLVDRSEYKRRQAAIGTKISHKAF 536 Query: 544 GRDRLYPISNKF 555 GR+R YP+ N + Sbjct: 537 GRERRYPLVNGW 548 >gi|332970488|gb|EGK09478.1| NAD synthetase [Psychrobacter sp. 1501(2011)] Length = 557 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/556 (42%), Positives = 339/556 (60%), Gaps = 23/556 (4%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K LK A+AQ + +VGDI NI K R EA G ++I+F EL + GYPPEDL+ + S Sbjct: 17 KSLKFALAQSHFMVGDIQTNIEKMRSLAIEARDNGANIIIFPELALLGYPPEDLLLRPSL 76 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +A+ +L +D +D +++G+P D G NS I+ G K LPNY Sbjct: 77 SDRVKAALSSL-NDIND--IVMIIGYPHVDYHGTFNSAAIIQNGQQKGFYHKQYLPNYGV 133 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E+R F G + ++ I +G+LICED+W++ I K LK QGA+ + ++NASP+ Sbjct: 134 FDERRYFDKGRNQVLFDYQGITIGLLICEDLWQDEPI-KALKDQGADLVVTINASPFEAG 192 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R +++ + + +LPI+YVN VGGQD+L+FDG S ++A + F E M Sbjct: 193 KQHTRQALLSKRATDNNLPIVYVNAVGGQDDLVFDGGSMAVQANGKVAHEAPRFLEH--M 250 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +++ + Q+ D+ + + L E Y A V+ LRDYV + F VI+GLSGG Sbjct: 251 LYANFNVESGQF-----DTQTKAPLQLSAESETYQALVVGLRDYVNHSGFEGVIVGLSGG 305 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL IAVDALG + V +M+PY+YTS SLEDA A A+ L Y V PIHD V+ Sbjct: 306 IDSALTLCIAVDALGSDKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIHDAVDGM 365 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + + ENIQ+R RG +LMALSN +++TT NKSE++VGY TLYGDM Sbjct: 366 RHTLAPLFSKAKADTTEENIQARARGMVLMALSNKFGHLVITTGNKSEMAVGYSTLYGDM 425 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF+ LKD+YKTQV+ LA++RN T+VIP ++ + PSAELRP Q DQ+S Sbjct: 426 AGGFDVLKDVYKTQVYALANYRNRL-------EDTDVIPERVITRPPSAELRPDQKDQDS 478 Query: 483 LPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 LP Y ILD I+K ++N+ F N+ + ++ +TVR ++ SEYKRRQA +GTKI+ Sbjct: 479 LPDYDILDAILKDYIDNDLGF--NEIVAKGFDPDTVRQTIRMVDRSEYKRRQAAIGTKIS 536 Query: 540 AKSFGRDRLYPISNKF 555 K+FGR+R YP+ N + Sbjct: 537 HKAFGRERRYPLVNGW 552 >gi|257093881|ref|YP_003167522.1| NAD synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046405|gb|ACV35593.1| NAD+ synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 536 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 232/555 (41%), Positives = 326/555 (58%), Gaps = 25/555 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKIAIAQ+N VGD AGN + E A QG DL+L EL + GYPPEDL+ + F Sbjct: 3 LKIAIAQINATVGDFAGNAQRILDFAERARAQGADLLLTPELSLCGYPPEDLLLRDDFCA 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC + L S G ++VG P + N+ ++ G +A K LP+Y F Sbjct: 63 ACEHELALLASRV--AGIAVLVGHPEKRAAHCYNAATLITDGTRVATYYKQRLPSYEVFD 120 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F SG + + +R G+ IC D+W+ + + GAE L LNASPY+ K Sbjct: 121 EERYFDSGEGPCVLTLKGVRCGVNICADVWE-AGAADLARNAGAEVLLVLNASPYHIGKR 179 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R E++ +I+ LP++Y N GGQDEL+FDG SF D + L Q+ F E Sbjct: 180 ERRTEVLRQRIASTGLPVVYANLAGGQDELVFDGGSFVLDSRGTLCCQLPQFEEA----- 234 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGI 303 L +++ + + P EA+ Y A VL +RDY+ KN F IIGLSGGI Sbjct: 235 ------LGIVDFVDGEPQAAAIAPAPCLEAEVYQALVLGVRDYLGKNGFPGAIIGLSGGI 288 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V+ +M+P YT+ SL ++ + LG +YD + I + F Sbjct: 289 DSALTLCIAVDALGADKVRAVMMPSPYTAELSLAESREMVRLLGIRYDEIAIEPAMQTFA 348 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 +++ Q P+ EN+Q+RIRG ILMA+SN + +++LTT NKSE++VGY TLYGDM+ Sbjct: 349 AMLEQQFAGLPADTTEENLQARIRGMILMAISNKTGSLVLTTGNKSEMAVGYCTLYGDMA 408 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF +KD+ KT V++L+ WRN+ + IP I+ + PSAEL+P QTDQ+SL Sbjct: 409 GGFAVIKDIAKTLVYRLSRWRNTR---------SYAIPERIISRPPSAELKPDQTDQDSL 459 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD I++ +E + S Q + + VR V HLL SEYKRRQAPVG ++T + Sbjct: 460 PPYEVLDAIVEAYMEKDLSPRQIIAQGHAEADVRRVVHLLKISEYKRRQAPVGIRVTQRG 519 Query: 543 FGRDRLYPISNKFRD 557 FG+D YPI+N++RD Sbjct: 520 FGKDWRYPITNRYRD 534 >gi|254487562|ref|ZP_05100767.1| glutamine-dependent NAD(+) synthetase [Roseobacter sp. GAI101] gi|214044431|gb|EEB85069.1| glutamine-dependent NAD(+) synthetase [Roseobacter sp. GAI101] Length = 552 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 242/558 (43%), Positives = 337/558 (60%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + QLNP VGD+AGN AR A + G DL+ E+FI+GY +DLV K+ Sbjct: 1 MTSRFRITLGQLNPTVGDLAGNADLARDAWAKGKAAGADLVALPEMFITGYNAQDLVMKR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + I+ L +D DG A + +G P + + N+ +IL G + + K NLPN Sbjct: 61 AFQLDVMTHINALAADCADGPA-LAIGAPWVEGAELYNAYLILKGGKVASRAFKHNLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F S P D R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRVFDSAPLAGPYSVGDTRIGSPICEDAW-HPDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ LP+IY+N VGGQD+ +FDGASF + +LAFQM F + Sbjct: 179 RGKFETRLNNMVARVVETELPLIYLNMVGGQDDQVFDGASFGLNPGGKLAFQMPTFDAE- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +Q W + A ++P E E DY V LRDY++K F KV++GLS Sbjct: 238 -IAHVDLEQGSEGWRIVDGPKA---HLP-SEYEQDYRVMVQGLRDYMRKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ AAIAVDALG + V+ +MLP +YTS SL+DA A AKALGC+YD +PI Sbjct: 293 GGIDSAIVAAIAVDALGADKVRCVMLPSEYTSQASLDDAEAVAKALGCRYDYVPIKQGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITETLAPLFEGMKPDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN + +GP +VI P I++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNENHRDWMMGPAGKVITPRIIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD ++ +V+ + S + ++ + + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPDLDAMLDILVDQDGSIADCVAAGFDRDVAKKVEHLIYISEYKRFQSAPGPRLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 +F DR YPI N++RD Sbjct: 533 KGAFWLDRRYPIVNRWRD 550 >gi|119897651|ref|YP_932864.1| NAD synthetase [Azoarcus sp. BH72] gi|119670064|emb|CAL93977.1| NAD(+) synthase (glutamine-hydrolyzing) [Azoarcus sp. BH72] Length = 538 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 240/563 (42%), Positives = 335/563 (59%), Gaps = 31/563 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L IA+AQLN VGD+ GN + A A +G L++ EL +SGYPPEDL+ + Sbjct: 1 MNTALSIAVAQLNFTVGDLVGNADRIIEAISAARERGAGLLITPELALSGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F + C+ + + D +V+G P + N+ ++ G +IA K LPNY Sbjct: 61 DFYRGCAREVRRIAGHCRD--FCLVLGHPTERGGVYYNAASVIRDGEVIATYHKHLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F E+R F SG + P VF +R+G+ IC D+W+ S + + GAE L SLNASP Sbjct: 119 EVFDEERYFESGVA--PCVFEHGGVRIGVNICADVWE-SGPAEVARAAGAEVLVSLNASP 175 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 ++ +K + R+ ++ ++ LP++Y N VGGQDEL+FDGASF D +A+Q + F+ Sbjct: 176 FHIDKQQLRYAVLRDRVRETRLPVLYCNMVGGQDELVFDGASFALDRDGTVAYQSEAFAA 235 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + ++Q +W S P E Y A V +RDY+ KN F IIG Sbjct: 236 --CIDVLRFEQ--GRW------SGGGHAAPKGTEADIYAALVCGVRDYLGKNGFPGAIIG 285 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A+AVDALG + V +M+P YT+ SL+D+ K LG +YD + I Sbjct: 286 LSGGIDSALTLAVAVDALGADRVHAVMMPSPYTAQMSLDDSREMVKRLGVRYDEIAIEPA 345 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 +N F L++ + EN+QSRIRG ILMALSN + A++LTT NKSE++ GY TL Sbjct: 346 MNVFADLLAPQFAGLAADTTEENLQSRIRGMILMALSNKTGAIVLTTGNKSEMATGYATL 405 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGF LKDLYKT V++LA+WRNS G EVIP +I+++ PSAEL+P Q Sbjct: 406 YGDMAGGFAVLKDLYKTTVYRLAAWRNSVG---------EVIPQNIIDRPPSAELKPDQK 456 Query: 479 DQESLPPYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 DQ+SLPPY +LD II+ +E++ES I D VR +L +EYKRRQAPVG Sbjct: 457 DQDSLPPYEVLDAIIQAYMEHDESPREIIARGLPEAD--VRRTVTMLKRNEYKRRQAPVG 514 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 ++T + FGRD YPI+++++D Sbjct: 515 IRVTQRGFGRDWRYPITSRYQDE 537 >gi|300724142|ref|YP_003713459.1| putative glutamine-dependent NAD(+) synthetase [Xenorhabdus nematophila ATCC 19061] gi|297630676|emb|CBJ91341.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Xenorhabdus nematophila ATCC 19061] Length = 540 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 236/556 (42%), Positives = 335/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L I +AQLN +VGDI GN + + +E + DL++F+EL +SGY PEDL+F+ Sbjct: 1 MSRTLNIGLAQLNWLVGDIEGNCERMLQTVKEQQEKEADLVMFSELALSGYFPEDLLFRS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Q C + L+ + I+VG P Q + N++ + G ++A K LPNY Sbjct: 61 DLHQRCREQLIRLQEASSQ--VAILVGHPWQQDGKLYNALSLFWQGEVVARYFKQLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F +G + I F+ LG+LICED+W + + LKK GAE + S+NASPY Sbjct: 119 GVFDEERYFKAGKQDCVIPFKGYNLGLLICEDLWFDEPV-NALKKAGAEIILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LPI+Y+NQVGGQD+LIFDG S FD + ++ +M F EQ Sbjct: 178 REKPNIRSALIKSHCQRTQLPIVYLNQVGGQDQLIFDGCSKVFDAKGEITHRMVAFEEQ- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + +D M+ + + L Y A VLS+RDYVQKN F ++GLS Sbjct: 237 -IEQCRFDG-------MNIEPMANPIPQLPSLGQIYKALVLSVRDYVQKNGFKGALLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGK++VQ +M+P++YTS S+ DA A+ LG ++DV+ I + + Sbjct: 289 GGIDSGLTLAIAVDALGKDHVQAVMMPFRYTSEMSIHDAREQAEMLGVEFDVVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 349 AFMTQLEPMFAGTEKDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF L+ +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFNALKDVPKTMVFALSEYRNT---------VSPAIPQRVIDRPPSAELAPDQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ VE ++S + E DE VR V L+ +EYKRRQAP+G +IT Sbjct: 460 DSLPPYDMLDAILEGYVEKDKSVADLIAEGFDEVIVRKVIRLVDINEYKRRQAPIGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 + FG+DR YPI++ F Sbjct: 520 QRDFGKDRRYPITSGF 535 >gi|88800780|ref|ZP_01116337.1| NAD synthase [Reinekea sp. MED297] gi|88776486|gb|EAR07704.1| NAD synthase [Reinekea sp. MED297] Length = 538 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 235/552 (42%), Positives = 329/552 (59%), Gaps = 19/552 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ VGDI GN+ K EA QG D+I+F EL ++GYPPEDL+ + S + Sbjct: 1 MKLALAQQRFPVGDIDGNVDKILTLSREAMAQGADMIVFPELTLTGYPPEDLLLRPSLAK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S A+ L +VVG+P+++ + N V+++ G +IA K +LPNY F Sbjct: 61 RVSQAMHRLFDARLP--IAMVVGYPQREDGKLYNKVMVISEGQVIADYRKQHLPNYQVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G F R+G+ ICEDIW + + + GA+ ++N SPY N+ Sbjct: 119 EKRYFQKGDQTCVFDFMGARIGLSICEDIWYDGP-ARRAYEAGAQINLNINGSPYSINRT 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RHE VT +S + +YVN VGGQDEL+FDG SF + + F E E Sbjct: 178 AERHEQVTRVVSQWPMATVYVNHVGGQDELVFDGGSFVVGADATVQASLPEFQEALQYVE 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q+ + W S + P+ E A Y A L DYV +N F V++G+SGGID Sbjct: 238 --LTQEANGWQVKSGEVTP----PMSVEAALYEALKTGLADYVNRNRFPGVVLGMSGGID 291 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AAIAVDALG + V +M+PY YT+ SLEDA A+ LG +Y+VLPI + + Sbjct: 292 SALSAAIAVDALGPDRVMGVMMPYHYTAKISLEDAEDEARRLGIRYEVLPIGEAFEAALT 351 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + P+ + +N+QSR+RG LMALSN + M+LTT NKSE++VGY TLYGDM G Sbjct: 352 TLQPQFGDRPADVTEQNMQSRMRGLFLMALSNKTGNMVLTTGNKSEMAVGYATLYGDMCG 411 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 G+N LKD+ K V++L+ WRNS G EVIP ++ + PSAEL P Q D++SLP Sbjct: 412 GYNCLKDVPKLWVYRLSRWRNSFG---------EVIPERVITRPPSAELAPDQLDEDSLP 462 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD II+R VE++ES + +N++ V+ V L+ +EYKRRQAP G ++T + F Sbjct: 463 PYEVLDAIIERYVEHDESQQTIIESGFNEDDVKRVIRLIDLNEYKRRQAPEGVRVTKRGF 522 Query: 544 GRDRLYPISNKF 555 GRDR YPI++ + Sbjct: 523 GRDRRYPITHGW 534 >gi|304415435|ref|ZP_07396084.1| putative NAD synthase [Candidatus Regiella insecticola LSR1] gi|304282699|gb|EFL91213.1| putative NAD synthase [Candidatus Regiella insecticola LSR1] Length = 546 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/561 (42%), Positives = 347/561 (61%), Gaps = 28/561 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + RA ++ R DL++F+EL + GYPPEDL+F+ Sbjct: 2 MNRSLSIALAQLNLLVGDIKGNTDRILRALKQ-QRGRADLVMFSELALCGYPPEDLLFRA 60 Query: 61 SFIQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F Q C + + L K+ H I+VG P + + + N++ G ++ K LPN Sbjct: 61 DFNQLCITQLARLQKASVH---TAILVGHPWKQGDQLYNALSFFSEGKLLGRYFKQLLPN 117 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 +S F EKR F G ++ + F+ RLG+LICEDIW + LK GAE L S+NASPY Sbjct: 118 HSVFDEKRYFTPGNTSCIVEFKGYRLGMLICEDIWSPDPV-DALKNLGAEVLLSINASPY 176 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K R++++ LP++Y+NQVG QDELIFDG S F+ Q L ++ FSE+ Sbjct: 177 HREKPYIRNQLLINHCKGTTLPLVYLNQVGVQDELIFDGCSKVFNAQGDLIHRLAAFSEE 236 Query: 240 N--FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 + F + QQ+++ +D + +Y +A V+++RDYV KN F I+ Sbjct: 237 SLVFNLKELASQQIAETAIDADHPLAQIY----------DALVMAVRDYVNKNGFKTAIL 286 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIAVDAL +NVQ +M+P++YTS +S+ A A+ + + IH Sbjct: 287 GLSGGIDSALTLAIAVDALTAKNVQALMMPFRYTSEESINYARQQAQKQKIELKEIDIHP 346 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + ++ F + EN+Q+R RG +LMA++N ++LTT NKSE++VGY T Sbjct: 347 IFDAVMGQLAPFFADRKKDTTEENLQARCRGMLLMAMANKFGHIVLTTGNKSELAVGYST 406 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSH-GITSGLGPLTEVIPPSILEKSPSAELRPH 476 LYGDM+GGF+ LKD+ KT VF+LA +RN+ G+ EVIP +++++ PSAEL P+ Sbjct: 407 LYGDMAGGFDVLKDVSKTLVFKLAKYRNARDGV--------EVIPQAVIDRPPSAELAPN 458 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+ LPPY +LD I++ +E +ES + + DE TVR V HL+ +E+KRRQA +G Sbjct: 459 QTDQDQLPPYAVLDKILEGYLEKDESVTDLVAQGCDEATVRKVIHLVDSNEHKRRQAAIG 518 Query: 536 TKITAKSFGRDRLYPISNKFR 556 +IT + FG+DR YPI+N FR Sbjct: 519 PRITCRDFGKDRRYPITNGFR 539 >gi|78485716|ref|YP_391641.1| NAD+ synthetase [Thiomicrospira crunogena XCL-2] gi|78364002|gb|ABB41967.1| NH(3)-dependent NAD(+) synthetase [Thiomicrospira crunogena XCL-2] Length = 545 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 237/573 (41%), Positives = 352/573 (61%), Gaps = 44/573 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDL 56 M ++L I +AQ+NP+VGD+ GN I A++A+ E D+++F E+ ++GYPPEDL Sbjct: 1 MSEQLTIIMAQINPIVGDVEGNTSLIIESAKQAKMEHQ---ADIVVFPEMTLTGYPPEDL 57 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKI 115 +F+++ Q S++ T+ D +V+G+P D+ G N ++ G I A K Sbjct: 58 LFREALYQQVESSLSTICEQVTD--TVLVIGYPMMDELGDRFNMAAWIEDGQIQASYIKQ 115 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 NLPNYS F EKR F SG + ++ ++ G+LICEDIWK S + +K GA+ L +LN Sbjct: 116 NLPNYSVFDEKRYFSSGQQPCVVEYKGVKFGLLICEDIWKLSPADQSVKA-GADILLNLN 174 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF--CFDGQQQLAFQM 233 ASP+ K + R +V ++ V P+IYVNQVGGQDEL+FDG SF C +G+ Q+ Sbjct: 175 ASPFSQEKHQDRIRVVKRRVEEVKRPVIYVNQVGGQDELMFDGGSFATCAEGEVQV---- 230 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP------LQEEEADYNACVLSLRDYV 287 F T+ + L Q + + + +P LQ E Y A V+ ++DYV Sbjct: 231 ---QGAEFKTDLIPVKILKQAD-------AVVILPGEKAELLQNEARVYEALVMGVKDYV 280 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 KN F V++GLSGGIDSAL AIAVDALG V+ +M+P+KYT+ S+EDA A+ LG Sbjct: 281 HKNGFKGVLLGLSGGIDSALTLAIAVDALGDNQVEAVMMPFKYTADISVEDAEKEAQVLG 340 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 Y +PI + + + S ++ + + EN+Q+RIRG +LM++SN + ++L TSN Sbjct: 341 VHYHSIPIEPIYDAYESALASRFEGYEEDVTEENMQARIRGVLLMSISNKTGKLVLATSN 400 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM GGF+PLKD+ KT V++LA +RN+ ++ VIP ++ + Sbjct: 401 KSEVAVGYSTLYGDMVGGFSPLKDVPKTLVYRLAEYRNT---------ISSVIPERVITR 451 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE--YNDETVRYVEHLLYGS 525 PSAELRP Q DQ+SLP Y +LD IIK V+ ++S +E Y+ + V + ++ + Sbjct: 452 PPSAELRPDQKDQDSLPDYEVLDTIIKAFVKEDKSPAQIVEEFGYDKQEVVRITKMISRN 511 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 EYKRRQA G KI+ ++FGRDR YPI++++ + Sbjct: 512 EYKRRQAAPGVKISPRAFGRDRRYPITSRYAEE 544 >gi|226943322|ref|YP_002798395.1| glutamine-dependent NAD+ synthase [Azotobacter vinelandii DJ] gi|226718249|gb|ACO77420.1| glutamine-dependent NAD+ synthase [Azotobacter vinelandii DJ] Length = 556 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 237/563 (42%), Positives = 338/563 (60%), Gaps = 29/563 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFK 59 M + L++ +AQLN VGD+ GN+ + A A + +G D+I+F EL + GYPPEDL+ + Sbjct: 13 MSQTLRVVMAQLNLRVGDVHGNVERIIEAACSARDDRGADVIVFPELALCGYPPEDLLLR 72 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S + LK + G +V+G+P + N+ ++ G ++A K +LPN Sbjct: 73 SSMQLRIEQGLQRLKDEVR--GIYLVIGYPWLEDGRRFNAAAVIADGELLASYYKQHLPN 130 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F E+R F G + + I + + ICEDIW + + ++ GA + SLNASP+ Sbjct: 131 YRVFDERRYFEPGSEACLLDIKGIPVALSICEDIWFPGPM-RQAREAGARLMLSLNASPF 189 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + +K ++R EI+ + S +P+IYVNQVGGQDEL+FDG S Q+ + F E Sbjct: 190 HLDKQREREEILVARTSEGGMPVIYVNQVGGQDELVFDGGSCVVAADGQVVQRAPAFVEG 249 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYI----PLQEEEAD-YNACVLSLRDYVQKNNFHK 294 + + + DD A+T PL E EA Y A VL +RDYV KN F Sbjct: 250 LYPVDLG----------IGDDGAATPRATNCAPLPELEASVYQALVLGVRDYVCKNGFKG 299 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++GLSGGIDSAL A+AVDALG E V+ +M+PY YT+ SLEDA A A+ALG Y VLP Sbjct: 300 VVLGLSGGIDSALTLAVAVDALGAERVEAVMMPYHYTAQMSLEDAEAEARALGVTYRVLP 359 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I +V F ++ + EN+Q+R RG +LMA+SN ++LTT NKSE++VG Sbjct: 360 IAPMVEAFMGTLAPVFEGLGRDTTEENLQARCRGTLLMAISNKKGYLVLTTGNKSEMAVG 419 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGF+ LKD+ KT VF+L +RN G VIP ++++ PSAEL Sbjct: 420 YATLYGDMAGGFDVLKDVPKTLVFRLCDYRNRLG---------AVIPQRVVDRPPSAELA 470 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAP 533 P Q D++SLPPYP+LD+I+K +E + S E ++++TVR V L+ +EYKRRQA Sbjct: 471 PGQKDEDSLPPYPVLDEILKLYIEYDLSANAIVAEGFDEDTVRRVLRLVDLNEYKRRQAA 530 Query: 534 VGTKITAKSFGRDRLYPISNKFR 556 VG ++T + FGRDR YPI++ +R Sbjct: 531 VGVRVTQRGFGRDRRYPITSGWR 553 >gi|261345356|ref|ZP_05973000.1| NAD(+) synthase [Providencia rustigianii DSM 4541] gi|282566399|gb|EFB71934.1| NAD(+) synthase [Providencia rustigianii DSM 4541] Length = 540 Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust. Identities = 230/556 (41%), Positives = 341/556 (61%), Gaps = 23/556 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL I++AQLN +VGDI GN + + E+ + Q D+++F+EL ++GY PEDL+F+ Sbjct: 1 MSRKLNISLAQLNWLVGDIEGNCDRMLQVVEQQS-QNTDIVMFSELALTGYSPEDLLFRH 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F + C + + L+ + G I+VG P + + N++ G ++A K LPNY Sbjct: 60 DFEERCVAQLKRLQQAS--GECAIIVGHPWYEDSEIYNALSFFYQGKLLARYFKQELPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F + + F+ RLG+LICEDIW + I ++K GAE + ++NASPY Sbjct: 118 GVFDEPRYFTAAEDTCVVDFKGYRLGLLICEDIWYDEPI-DNVKGAGAELVLTINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R +++ LPIIY+NQVGGQDEL+FDGAS + + +QM F EQ Sbjct: 177 LHKEHIRSDLLEEHCQRTGLPIIYLNQVGGQDELVFDGASKVLANKGKQVYQMAEFDEQV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + +++ + + S + Y A VL+ RDY+ KN F+ I+GLS Sbjct: 237 ATVTFEELKLVTEQPKLPEVSTTAQV---------YQALVLATRDYINKNGFNGAILGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDA+GKE VQ +M+P++YTS S+ DA A+ LG ++D++ I + + Sbjct: 288 GGIDSGLTVAIAVDAIGKEQVQAVMMPFRYTSEMSIHDAKEQAELLGVEFDIVSIEPMFD 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 348 AFMTELQPMFAGAQADTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 408 DMAGGFDVLKDVPKTLVFELAKYRNT---------ISPAIPQRVIDRPPSAELAPGQLDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ VE + S + + ++ ETVR V L+ +EYKRRQAPVG +IT Sbjct: 459 DSLPPYDVLDAILEGYVEKDLSVTDLIKLGFDKETVRKVVRLVDINEYKRRQAPVGPRIT 518 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 519 MRNFGKDRRYPITSGF 534 >gi|260575409|ref|ZP_05843408.1| NAD+ synthetase [Rhodobacter sp. SW2] gi|259022329|gb|EEW25626.1| NAD+ synthetase [Rhodobacter sp. SW2] Length = 552 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 237/557 (42%), Positives = 331/557 (59%), Gaps = 9/557 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VG IA N A AR + + G ++ E+FI+GY +DL+ K Sbjct: 1 MAETFRLTLAQLNPTVGAIAANAALARDVWAQGHAAGAQMVALPEMFITGYQTQDLILKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 SF+ A +A+ L D G A + +G P + N +L G + A K +LPN Sbjct: 61 SFVAAAMAAVQALAVDCATGPA-LGIGGPVVQDGQLYNGYYVLAGGRVAATVLKHHLPND 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F + P+ +RLGI ICED W + ++ L GA+ L N SPY+ Sbjct: 120 GVFDEKRVFAAAEVGAPVTVGPLRLGIPICEDAW-HPDVTAALAAAGADILLIPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ +++ L ++Y+N GGQD+ +FDGASF + Q+A QM F + Sbjct: 179 RGKPLQRVRLMQTRVAETGLALVYLNMTGGQDDQVFDGASFVVNPGGQIALQMPQFDDAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ Q W + D I EADY ACVLSLRDY+ K F +V++GLS Sbjct: 239 VQVDFTRGPQ--GWQAVPGDLTPIPRI----WEADYRACVLSLRDYLAKTGFKQVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DA+G NV+ +MLP +TS SL+DA A+ LGC+ D +PI Sbjct: 293 GGIDSAIVATIAADAIGPANVRCVMLPSGFTSAHSLQDAGEVARNLGCRLDTVPIGGAQA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + GI ENIQSR+RG +LMA+SN + AMLLTT NKSE++VGY T+YG Sbjct: 353 AVGAALQPLFAGTAPGITEENIQSRLRGLMLMAISNKTGAMLLTTGNKSEMAVGYCTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KD+YKT+VF+ WRN + LGP VIP ++ K+PSAELR Q D Sbjct: 413 DMNGGYNPIKDMYKTRVFETCRWRNENHRPWMLGPTGAVIPERVISKAPSAELREGQRDD 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYP+LD I++ +V+ E+S Q ++ V+ VE LLY SEYKR QA GT++T Sbjct: 473 DSLPPYPVLDAILEGLVDREQSVAEIVAQGHDLAVVKRVEQLLYVSEYKRYQAAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFR 556 +FG DR YPI+N++R Sbjct: 533 PHAFGLDRRYPIANRWR 549 >gi|253988810|ref|YP_003040166.1| NAD synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780260|emb|CAQ83421.1| nh(3)-dependent nad+ synthetase [Photorhabdus asymbiotica] Length = 540 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 237/556 (42%), Positives = 339/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN ++GDI GN + + +E +QG DL++F+EL +SGY PEDL+F+ Sbjct: 1 MSRTLNIALAQLNWMIGDIEGNCERMLQTVQEQQQQGADLVMFSELALSGYSPEDLLFRA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + L++ + I+VG P + + N++ + G I+ K LPNY Sbjct: 61 DFHQRCREQLARLQAASDQ--VAILVGHPWEQDGEIYNALSLFWQGEILTRYFKQRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + F+ LG+LICED+W + I L++ GA+ + S+NASPY Sbjct: 119 GVFDEKRYFKAGDQSCVVPFKGYNLGLLICEDLWFDEPI-DALQQAGADLILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R+E++ LP++Y+NQVGGQDELIFDG S F+ ++ ++ F+EQ Sbjct: 178 REKPYIRYELIREHCQRTDLPMVYLNQVGGQDELIFDGCSKVFNASGEITHRLAAFNEQ- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 Q +N + + L + Y A VLS+RDYV+KN F V++GLS Sbjct: 237 --------IQQCCFNELKIEPMVNPAPELPPLQQVYQALVLSVRDYVRKNGFQGVLLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGKE VQ +M+P++YTS S+EDA A LG +++V+ I + + Sbjct: 289 GGIDSGLTLAIAVDALGKEYVQAVMMPFRYTSEMSIEDAKEQADMLGVEFNVVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 349 AFMVQFEPMFVGTVKDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFNALKDVPKTLVFELAKYRNT---------VSPAIPQRVIDRPPSAELAPGQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S +++E VR V L+ +EYKRRQAPVG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVDELMAAGFDEEVVRKVIRLVDINEYKRRQAPVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 520 PRNFGKDRRYPITSGF 535 >gi|92112628|ref|YP_572556.1| NH(3)-dependent NAD(+) synthetase [Chromohalobacter salexigens DSM 3043] gi|91795718|gb|ABE57857.1| NH(3)-dependent NAD(+) synthetase [Chromohalobacter salexigens DSM 3043] Length = 543 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/558 (42%), Positives = 323/558 (57%), Gaps = 23/558 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKK 60 ++ L + +AQL+P+VGDI GN A+A A EA D+++F ELF++GYPPEDL+F++ Sbjct: 1 MQDLTLVMAQLDPLVGDIPGNTAQAIEAVREARIEHRADVVVFPELFLTGYPPEDLLFRE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A + + +++G+P + + N +L G + K LPNY Sbjct: 61 SMESRLEQAREQMARKVARD-VMVIIGYPGKRDGRLHNLAGVLYDGEWLGEYAKQALPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F G S I R RLG+LICED+W + + + GA+ + +LNASPY+ Sbjct: 120 QVFDEQRYFAPGASPLVIEHRGARLGVLICEDLWDGGPVARSVDA-GADIVVTLNASPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K +R + + V P++Y+NQVGGQDEL+FDG S D Q+A + F E Sbjct: 179 RDKPLERERLFAERARAVTRPVVYLNQVGGQDELVFDGGSLVLDASGQVAVRAP-FWEVG 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 M D W + + L EE+ Y A V LRDYV KN F V++GLS Sbjct: 238 LMPVRFTDAS-GGWQPEAGECEPL----LSSEESLYCALVTGLRDYVNKNRFQGVVLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG E VQ +M+PY YT+ S DAAA A+ LG Y+V+PI +V Sbjct: 293 GGIDSALSLAIAVDALGPERVQAVMMPYHYTADISKADAAAQAELLGVHYEVMPIAPMVE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+QSR RG +LMALSN M+L+T NKSE++VGY TLYG Sbjct: 353 AFTDTLRESFAGTERDTTEENLQSRCRGVLLMALSNKKGLMVLSTGNKSEMAVGYATLYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+N LKD+YKT V++LA WRN+ IP ++ + PSAEL P Q D Sbjct: 413 DMVGGYNALKDVYKTWVYRLAKWRNAQ---------APAIPERVITRPPSAELAPDQADS 463 Query: 481 ESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 +SLP Y LD I++R +E + E+ I D + E V V L+ SEYKRRQAPVG + Sbjct: 464 DSLPAYDELDAILERYIEGDMSAEAII--DAGFASEDVYKVVKLVDRSEYKRRQAPVGVR 521 Query: 538 ITAKSFGRDRLYPISNKF 555 +T + FGRDR YPI N + Sbjct: 522 VTVRGFGRDRRYPIVNGW 539 >gi|294676904|ref|YP_003577519.1| NAD(+) synthase (glutamine-hydrolyzing) [Rhodobacter capsulatus SB 1003] gi|547988|sp|Q03638|NADE_RHOCA RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|45986|emb|CAA42042.1| NAD synthetase [Rhodobacter capsulatus] gi|294475724|gb|ADE85112.1| NAD(+) synthase (glutamine-hydrolyzing) [Rhodobacter capsulatus SB 1003] Length = 552 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 238/562 (42%), Positives = 341/562 (60%), Gaps = 15/562 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I +AQLNP VG +A N KA A + G DL+ E+F++GY +DLV K Sbjct: 1 MTDRFRITLAQLNPTVGALAANAEKAMAAWQAGRAAGADLVALPEMFLTGYQTQDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ +A+ L + DG A + +G P D+ G N+ +L G +IA K +LP+ Sbjct: 61 AFLRDAMAAMAALAAQVVDGPA-LGIGGPYVDETGSYNAWWVLKDGRVIARALKHHLPHD 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G +DP+ + LG+ +CED W + ++ L GAE L N SPY Sbjct: 120 DVFDEMRLFDQGPVSDPLRLGPVALGVPVCEDAW-HPDVAGALAAAGAEVLMVPNGSPYR 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ +++ LP++Y+N VGGQD+ +FDGASF + +A Q+ F E Sbjct: 179 RGKLDLRRQVTGARVAETGLPLLYLNMVGGQDDQLFDGASFVLNPDGSVAVQLPAFEEAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ + W + D + P + E DY A VL L+DY++K+ F +V++GLS Sbjct: 239 VHVD--LERGAADWRAVPAD----IVAPPGDIEQDYRAMVLGLQDYLRKSGFSRVVLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A IA DALG NV +MLP +YTS SL+DAA A+ LG + D + I Sbjct: 293 GGIDSALVAVIAADALGAGNVHCVMLPSRYTSQGSLDDAADLARRLGARLDTVEIEGPRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ L + ENIQSR+RG ILMA+SN AMLLTT NKSE++VGY T+YG Sbjct: 353 AVEGALAHVLAGTAPDVTEENIQSRLRGVILMAISNKFGAMLLTTGNKSEVAVGYCTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NPLKDLYKT+VF+ WRN+ P E+IP +I++K PSAELR +QTDQ Sbjct: 413 DMAGGYNPLKDLYKTRVFETCRWRNATHRPWMQAPAGEIIPVAIIDKPPSAELRENQTDQ 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEHLLYGSEYKRRQAPVGT 536 +SLPPY +LD I++R+VE ++S DQ ++ TV+ +EHLLY SE+KR Q+ G Sbjct: 473 DSLPPYEVLDAILERLVEGDQSV---DQIVAAGFDRATVKRIEHLLYISEWKRFQSAPGP 529 Query: 537 KITAKSFGRDRLYPISNKFRDH 558 ++T ++F DR YP+ N++RD Sbjct: 530 RLTTRAFWLDRRYPMVNRWRDQ 551 >gi|37527188|ref|NP_930532.1| NAD synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786622|emb|CAE15684.1| NH(3)-dependent NAD+ synthetase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 540 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 239/556 (42%), Positives = 339/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN ++GDI GN + + +E +Q DL++F+EL ISGY PEDL+F+ Sbjct: 1 MSRTLNIALAQLNWMIGDIEGNCERMLQTVQEQQQQNADLVMFSELAISGYSPEDLLFRA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + L++ + I+VG P + + N++ + G I+A K LPNY Sbjct: 61 DFHQRCREQLARLQAASCQ--IAILVGHPWEQDGEIYNALSLFWQGEILARYFKQRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + F+ LG+LICED+W + I LK+ GA+ + S+NASPY Sbjct: 119 GVFDEKRYFKAGDQSCVVPFKGYNLGLLICEDLWFDEPI-DALKQAGADLVLSINASPYS 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R+E++ LP+IY+NQVGGQDELIFDG S F+ ++ ++ F+EQ Sbjct: 178 REKPYIRYELIREHCRRTELPMIYLNQVGGQDELIFDGCSKVFNASGEVTHRLAAFNEQ- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 Q +N + + L + Y A VLS+ DYV+KN F V++GLS Sbjct: 237 --------IQQCCFNELKIEPMVNPAPELPPLQQVYQALVLSVHDYVRKNGFQGVLLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGKE+VQ +M+P++YTS S+EDA A LG +++V+ I + + Sbjct: 289 GGIDSGLTLAIAVDALGKEHVQAVMMPFRYTSEMSIEDAKKQADMLGVEFNVVSIEPVFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + EN+Q+R R ILMA+SN ++LTTSNKSE +VGY TLYG Sbjct: 349 AFMAQFEPLFAGTAKDTTEENLQARCRAVILMAMSNKRHRLVLTTSNKSESAVGYSTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFNALKDVPKTLVFALAKYRNT---------VSPAIPQRVIDRPPSAELAPGQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILDDI++ VE ++S ++++ VR V L+ +EYKRRQAPVG +IT Sbjct: 460 DSLPPYDILDDILEGYVEQDKSVDGLVAAGFDEQIVRKVVRLVDINEYKRRQAPVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 520 LRNFGKDRRYPITSGF 535 >gi|89055837|ref|YP_511288.1| NAD synthetase [Jannaschia sp. CCS1] gi|88865386|gb|ABD56263.1| NH(3)-dependent NAD(+) synthetase [Jannaschia sp. CCS1] Length = 552 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 229/558 (41%), Positives = 333/558 (59%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ +AQLNP +GD+ GN R A EA + D + F E+FI+GY DLV K+ Sbjct: 1 MADTFRLTLAQLNPTLGDLGGNAKLVREAFAEAKAEDSDFLAFPEMFITGYQLLDLVMKQ 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + I L ++ HDG A +G P + N+ I + G I A K +LPNY Sbjct: 61 AFAEDVQRVIADLAAELHDGPA-FGIGGPMWGGDKPYNAYYICEGGKIAATILKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + S P+ +R+G ICED W ++C+ L++ GAE L S N SPY+ Sbjct: 120 AVFDEVRYYHSADPQGPVNINGVRIGFPICEDAW-FEDVCETLEESGAEILISPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ R +V ++ LP+ Y+N +GGQD+ +FDG SF + LA QM F + Sbjct: 179 RGKMELRQSVVVSRVVETGLPMAYLNLLGGQDDQVFDGGSFVLNRGGALAVQMPQF--EA 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + W ++ D +P + EADY V++L DY++K F V++GLS Sbjct: 237 GLEQVDFARGDDGW--VAKDGVKAR-LP-EAYEADYRVMVMALGDYLRKTGFTSVVLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DA+G ENV +MLP ++TS SL+DA A LGC+ D +PI Sbjct: 293 GGIDSAIVACIAADAIGPENVHCVMLPSRFTSEVSLDDARDVAARLGCRLDTIPITPARE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + ENIQSR+RG +LMALSN +MLLTT NKSE++VGY T+YG Sbjct: 353 AVTASLAPLFEGLEEDVTEENIQSRLRGVMLMALSNKFGSMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN L P E+IPP +++K P+AELR Q D+ Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNREHRDWMLAPAGEIIPPRVIDKPPTAELREDQKDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD +++ +++ + S Y+ E VR +E L+Y SEYKR QA G ++T Sbjct: 473 DSLPPYAELDVMLEMLIDKDLSVAEVVAAGYDPEWVRKIERLIYLSEYKRFQAAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 K+F DR YP++N++RD Sbjct: 533 QKAFWLDRRYPVANRWRD 550 >gi|89070087|ref|ZP_01157417.1| NAD(+) synthase [Oceanicola granulosus HTCC2516] gi|89044308|gb|EAR50451.1| NAD(+) synthase [Oceanicola granulosus HTCC2516] Length = 552 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/559 (42%), Positives = 339/559 (60%), Gaps = 11/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ IAQ NP VGD+AGN A+AR A E G +++ E+F++GY +DLV K Sbjct: 1 MSERFRLTIAQANPTVGDLAGNAARARAAWEAGRAAGAQMVVLPEMFLAGYQTQDLVQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ C ++TL DG A + +G P + + N IL G + A K +LPNY Sbjct: 61 AFVADCQRHLETLAEACADGPA-LGIGAPVIEGTALYNGYFILCNGRVHAAMRKFHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E+R + G + P +R+G ICED W ++ + + + GAE L N SPY+ Sbjct: 120 TVFDEERLYEHGSFSGPYEVAGVRIGTPICEDAWY-PDVAETMVESGAEILVVPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ +P++Y+N VG QD+ +FDGASF + LA ++ F E Sbjct: 179 REKFDVRLNRMVARVVENDVPLVYLNLVGAQDDQVFDGASFVLNRHGALALRLPAFEEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGL 299 + + + + W + A PL + E DY+A VLSL DY++K F KV++GL Sbjct: 238 -VAHVDFARTDAGWRAEPGEIA-----PLPDSLEQDYHAMVLSLSDYMRKTGFGKVLLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ A +A DALG ENV+ +MLP +YTS SLEDA A A LGC+YD +PI + Sbjct: 292 SGGIDSAIVATVAADALGPENVRCVMLPSEYTSETSLEDARAVAANLGCRYDFVPITRVR 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + ++ + + EN+QSRIRG +LMA SN MLLTT NKSE++VGY T+Y Sbjct: 352 DAVTETLAPLFEGLAEDLTEENVQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYATIY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KDLYKT+VF L WRN++ P EVIP +++K PSAELR Q D Sbjct: 412 GDMAGGYNPIKDLYKTRVFALCRWRNANHRPWMAAPAGEVIPVRVIDKPPSAELRADQKD 471 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLPPY +LD I+K +V+ + S + Y ETV+ VE L+Y SEYKR Q+ GT++ Sbjct: 472 EDSLPPYDVLDGILKLLVDEDSSVADCVAAGYERETVKRVEQLIYISEYKRFQSAPGTRL 531 Query: 539 TAKSFGRDRLYPISNKFRD 557 + ++F DR YPI N++RD Sbjct: 532 SMRAFWLDRRYPIVNRWRD 550 >gi|291614117|ref|YP_003524274.1| NAD+ synthetase [Sideroxydans lithotrophicus ES-1] gi|291584229|gb|ADE11887.1| NAD+ synthetase [Sideroxydans lithotrophicus ES-1] Length = 534 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/554 (42%), Positives = 327/554 (59%), Gaps = 23/554 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+N VGD+AGN AK + A +QG ++L EL + GYPPEDL+ + F Sbjct: 1 MKIAIAQINCTVGDLAGNAAKIAEYAQRAKKQGAGILLTPELSLCGYPPEDLLLRDGFYH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A+ L G ++VG PR+ NS +L G I+A +K LPN+S F Sbjct: 61 ACDTALRDLALQAQ--GITLIVGHPRKIDRHFYNSASVLRDGKIVATYNKHALPNHSVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G I +R GI IC D+W + + K+ GA+ L LNASPY+ NK Sbjct: 119 EERYFAHGNEPCLIELDGVRFGINICADVW-HEHAAIRAKEAGAQVLLVLNASPYHFNKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R+E + +I L ++Y N VGGQDEL+FDGASF D + +L Q F E + E Sbjct: 178 DTRYETIRERIVDTGLAVVYANMVGGQDELVFDGASFVMDNEGELTHQFPAFDELLGLVE 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + D +L + +++E + Y A + +RDY+ KN F V++GLSGGID Sbjct: 238 FE-DGKLVPGKCEN---------VVKDEASIYRALCVGVRDYIGKNRFPGVLLGLSGGID 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A+AVDALG + V +M+P YT+ S++D+ + LG +Y+ L I Sbjct: 288 SALTLAVAVDALGADKVLAVMMPSPYTAQMSIDDSREMVRLLGVRYEELDILPTFTALQE 347 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + P+ EN+Q+RIRGN+LMA+SN + +++LTT NKSE++VGY TLYGDM+G Sbjct: 348 TLSPLFKGLPADTTEENLQARIRGNLLMAISNKTGSLVLTTGNKSEMTVGYATLYGDMAG 407 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V++L++WRNS G VIP I+ + PSAEL+P QTDQ+SLP Sbjct: 408 GFAVLKDVSKTWVYRLSNWRNSMG---------RVIPERIITRPPSAELKPDQTDQDSLP 458 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y +LD I+ VE + D Y V V L+ +EYKRRQAPVG +IT + F Sbjct: 459 LYDVLDAIMACYVEKNMNIAQIEDLGYASADVLRVVRLIRIAEYKRRQAPVGVRITDRGF 518 Query: 544 GRDRLYPISNKFRD 557 G+D YPI+ +++D Sbjct: 519 GKDWRYPITVRYQD 532 >gi|152996972|ref|YP_001341807.1| NAD+ synthetase [Marinomonas sp. MWYL1] gi|150837896|gb|ABR71872.1| NAD+ synthetase [Marinomonas sp. MWYL1] Length = 545 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 236/563 (41%), Positives = 342/563 (60%), Gaps = 26/563 (4%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 L+IA+AQL+ +VGDI N I A +AR+E + D+++F EL ++GYPPEDL+ + Sbjct: 3 LRIAMAQLDMLVGDITKNTQSVIDAANKARDE---ERADVVVFPELTLTGYPPEDLLLRS 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S SA+ L ++ HD +VVG+PR+ + N ++ G ++ K LPN+ Sbjct: 60 SLDTRIESALAKLLAEVHD--IYVVVGYPRRIDGELFNCAGVIYQGQLLVEYAKQKLPNF 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F +KR F G + + +++G+ ICEDIW I + K GAE + +LNASPY+ Sbjct: 118 LVFDDKRYFSEGREAGLVDIKGVKVGLSICEDIWHPGPIAQA-KAAGAELILNLNASPYH 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K+ +R E++ + + V LPI+YVN +G QDEL+++G SF + + + Q F Sbjct: 177 IEKMGEREELLHQRATEVTLPIVYVNYMGAQDELVYEGGSFVVNAKGEKIMQAPWFEAGL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + D SQ N + + A ++ L E + Y A VL LRDY+ KN F +++GLS Sbjct: 237 YSIDMIVDD--SQPNKV-EPVAGSIAPALGVEASVYQAMVLGLRDYITKNRFKGIVLGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A+AVDA+G + VQ +M+PY YTS SL DA A LG KY VLPI +V+ Sbjct: 294 GGIDSALSLAVAVDAIGADRVQAVMMPYTYTSSISLHDAEEEANLLGVKYSVLPIETMVS 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +++ + EN+Q+R RG LMA+SN M+LTT NKSE++VGY TLYG Sbjct: 354 AFTDVLAPEFEGYGKDTTEENLQARTRGVTLMAISNKKGYMVLTTGNKSEMAVGYATLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG++ LKD++KT VF+L +RN+ G VIP ++ + PSAEL P Q D+ Sbjct: 414 DMVGGYSVLKDVFKTLVFKLCRYRNTLGY---------VIPERVITRPPSAELAPDQKDE 464 Query: 481 ESLPPYPILDDIIKRIVENEES--FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLP Y ILD+I++ +E ++S I +++ ETV V L+ +EYKRRQAP G +I Sbjct: 465 DSLPSYDILDEILRMYIEEDQSAEAILATNQFDRETVYRVLRLVDVNEYKRRQAPTGVRI 524 Query: 539 TAKSFGRDRLYPISNKFRDHISE 561 TA+ FGRDR YPI+N + HI E Sbjct: 525 TARGFGRDRRYPITNGW--HIGE 545 >gi|307543917|ref|YP_003896396.1| NAD+ synthetase [Halomonas elongata DSM 2581] gi|307215941|emb|CBV41211.1| NAD+ synthetase [Halomonas elongata DSM 2581] Length = 557 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 235/566 (41%), Positives = 331/566 (58%), Gaps = 36/566 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKA-RRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ++ L + +AQL+P+VGDI GN +A RE G D+++ ELF++GYPPEDL+ + Sbjct: 14 MQDLTLVMAQLDPLVGDIPGNTERAIETVREARIEHGADVVVLPELFLTGYPPEDLLLRP 73 Query: 61 S----FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 S QA + + + D ++VG+P + + N +L G + K Sbjct: 74 SMETRLRQARARMAEKMARDVM-----VIVGYPGRREGANWNLAGVLYNGEWLGEYAKQA 128 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E+R F G S I + +LG+LICED+W+ + + ++ GA+ L +LNA Sbjct: 129 LPNYEVFDEQRYFAVGESPLVIEHKGAKLGVLICEDVWEEGPV-QQAREAGADILVTLNA 187 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SP++ +K +R ++ + V LPI+YVNQ+GGQDEL+FDG S C D +L Q H+ Sbjct: 188 SPFHQDKPAERLALLEQRAREVGLPIVYVNQIGGQDELVFDGGSACVDADGELRVQAPHW 247 Query: 237 SEQNFMTEWHYDQQLSQWNYMS---DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 + ++ D+Q W + D+ AS EE Y A V LRDYV K+ F Sbjct: 248 AVGLMPVQFVRDEQ-GAWVPSAGEVDEEASA-------EENLYCALVTGLRDYVNKSGFK 299 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 V++GLSGGIDSAL AIAVDALG + V +M+PY YT+ S EDAA A+ LG Y+VL Sbjct: 300 GVVLGLSGGIDSALSLAIAVDALGPQRVHAVMMPYHYTADISKEDAAEQARMLGVDYEVL 359 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI +V F ++ EN+QSR RG +LMA+SN M+L+T NKSE++V Sbjct: 360 PIESMVEAFMDTLADSFAGTERDTTEENLQSRCRGVLLMAISNKKGLMVLSTGNKSEMAV 419 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDM GG+N +KD+YKT V++LA WRN+ IP ++E+ PSAEL Sbjct: 420 GYATLYGDMVGGYNAIKDVYKTWVYRLARWRNTQ---------DPAIPERVIERPPSAEL 470 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 P Q D +SLP Y LD I+ R +E + E+ I +++D V V L+ EYKRR Sbjct: 471 APDQQDTDSLPDYDTLDAILVRYIEGDMSAEAIIEAGFDHDD--VYKVVRLVDRCEYKRR 528 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QAPVG ++T + FGRDR YPI N ++ Sbjct: 529 QAPVGVRVTRRGFGRDRRYPIVNGWQ 554 >gi|53804666|ref|YP_113448.1| NAD(+) synthetase [Methylococcus capsulatus str. Bath] gi|53758427|gb|AAU92718.1| NAD(+) synthetase [Methylococcus capsulatus str. Bath] Length = 539 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 237/558 (42%), Positives = 334/558 (59%), Gaps = 30/558 (5%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 L+IAIAQL+ +VGD+ GN +A A RAR+E G ++F EL ++GYPP+DL+ + Sbjct: 3 LRIAIAQLDFLVGDVGGNADRVLAAAVRARDE---LGAHAVVFPELALAGYPPDDLILRP 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ A +A+ L G ++VGFP + NS +L G I V K LPNY Sbjct: 60 DFLTAVETALKVLAERVR--GIDVIVGFPERHDGLPFNSAAVLRDGGIHKVYRKQILPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F EKR F+ G + P VF R + +G+ ICED+W + + GA + +LNASP Sbjct: 118 GVFDEKRHFLPGSA--PCVFDLRGVPVGLTICEDVWFPGPV-EQAAAAGARLVLNLNASP 174 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 ++ K +R +V +I+ +P++Y N VGGQDEL+FDG SF D L ++ F E Sbjct: 175 FHVGKSVEREHVVRERIAAARVPLVYTNLVGGQDELVFDGGSFVMDAAGGLVYRAPQFGE 234 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + D+ N +S + + P+ E E+ Y A V +RDYV KN F ++G Sbjct: 235 TLDAVGFTVDED--GVNPLS----ARLVEPMGEVESVYAALVTGIRDYVGKNGFRGAVLG 288 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A+AVDALG + V+ +++P +YT+ S+EDA A+ L + ++PI + Sbjct: 289 LSGGIDSALTLALAVDALGADRVEAVLMPSRYTADISIEDARQEAETLAVAWHLIPIEPV 348 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F L++ P+ + ENIQ+R RG ILMALSN +LLTT NKSE+SVGY TL Sbjct: 349 FRSFLDLLAGPFAGAPADVTEENIQARCRGVILMALSNKQGRILLTTGNKSEMSVGYATL 408 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGF PLKD+ K V++LA +RN+ ++ VIPP ++E+ PSAELRP Q Sbjct: 409 YGDMAGGFAPLKDVSKLLVYRLAEYRNA---------VSAVIPPRVIERPPSAELRPDQK 459 Query: 479 DQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D++SLPPY +LD I+ VE + S Y ++ VR V L+ +EYKRRQAP G K Sbjct: 460 DEDSLPPYAVLDPILALYVEQDRSIAEIVAAGYPEDVVRRVVRLVDRNEYKRRQAPPGIK 519 Query: 538 ITAKSFGRDRLYPISNKF 555 IT ++FGR+R YPI+ F Sbjct: 520 ITRRAFGRERRYPITCGF 537 >gi|183599762|ref|ZP_02961255.1| hypothetical protein PROSTU_03267 [Providencia stuartii ATCC 25827] gi|188022023|gb|EDU60063.1| hypothetical protein PROSTU_03267 [Providencia stuartii ATCC 25827] Length = 540 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/556 (41%), Positives = 335/556 (60%), Gaps = 23/556 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL I++AQLN +VGDI GN + + EE + D+++F+EL ++GYPPEDL+F+ Sbjct: 1 MSRKLNISLAQLNWLVGDIEGNCERMLQVFEE-QKNIADIVVFSELSLTGYPPEDLLFRA 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q ++ L++ + + IVVG P + + N++ G ++ K LPNY Sbjct: 60 DFTQRYLVQLERLQNASTE--TAIVVGHPWTEAGKMYNALSFFYQGKLLTRYFKQELPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + F+ R+G+LICEDIW + + +K+ GAE L ++NASPY Sbjct: 118 GVFDELRYFSAGDKTGVVDFKGYRIGLLICEDIWFDGPV-DAVKQAGAELLLTINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R +++ LPIIY+NQVGGQDELIFDG S ++ Q+ F EQ Sbjct: 177 RNKDHSRSDLLVRHCQRTQLPIIYLNQVGGQDELIFDGGSKVLASDGKITHQLVDFDEQI 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 Q+N +S + L Y V++ RDY+ KN F+ I+GLS Sbjct: 237 VNC---------QFNELSAVPMEKLAPALSPVAQVYQGLVMATRDYINKNGFNGAILGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDA+GKE VQ +M+P++YTS S+ DA A+ LG ++D++ I + + Sbjct: 288 GGIDSGLTVAIAVDAIGKERVQAVMMPFRYTSEMSIHDAKEQAELLGVEFDIVSIEPMFD 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 348 AFMSQLQPMFEGTAVDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 408 DMAGGFDVLKDVPKTLVFELAKYRNT---------ISPAIPQRVIDRPPSAELAPGQLDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD +++ VE + S +Q +++ TV V L+ +EYKRRQAPVG +IT Sbjct: 459 DSLPPYDILDALLEAYVEKDYSVAQLIEQGFDEATVHRVVRLVDINEYKRRQAPVGPRIT 518 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 519 VRNFGKDRRYPITSGF 534 >gi|159043154|ref|YP_001531948.1| NAD synthetase [Dinoroseobacter shibae DFL 12] gi|157910914|gb|ABV92347.1| glutamine-dependent NAD(+) synthetase [Dinoroseobacter shibae DFL 12] Length = 557 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/559 (42%), Positives = 338/559 (60%), Gaps = 11/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ + QLNP +G ++ N KA RA +E G + E+F++GY +DLV + Sbjct: 1 MSDTFRLTLGQLNPTLGALSENAQKALRAWQEGKLAGAQFVALPEMFLTGYQTQDLVMRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + L D DG A + +G P + NS IL+ G + A K +LPN Sbjct: 61 AFAADAERVLQGLARDCADGPA-LGIGCPLVQGGKLYNSYAILEGGAVKARVLKHHLPNS 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F +G + P +R+G ICED W ++ + L + AE LF N SPY+ Sbjct: 120 DVFDEERLFTAGPVSGPYRIGPLRIGTPICEDAWY-PDVAETLAESAAEILFVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ ++ LP+IY+N VGGQD+ +FDGASF + LA Q+ E Sbjct: 179 RGKHDTRLNLMVARVIETGLPLIYLNMVGGQDDQMFDGASFALNTHGALAMQLPAMEE-- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGL 299 H D + + +D+ PL +E EADY V SLRDY++K+ F KV++GL Sbjct: 237 --VIAHLDLTQTAEGWRIEDARKD---PLPDEWEADYRVMVESLRDYLRKSGFGKVLLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ AAIA DA+G +NV+ +MLP +YTS +SLEDA A A+ LGC+ D LPI Sbjct: 292 SGGIDSAIVAAIAADAIGPQNVRCVMLPSEYTSQESLEDAEAVARNLGCRIDTLPITGPR 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 +++ F PSGI EN+QSR+RG +LMALSN MLLTT NKSE++VGY T+Y Sbjct: 352 AAVTEVLAPFFNGTPSGIAEENVQSRLRGVLLMALSNKFGEMLLTTGNKSEVAVGYATIY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KDLYKT+VF+ WRN LGP E+IP ++EK PSAELR Q D Sbjct: 412 GDMAGGYNPIKDLYKTRVFETCRWRNETHRPWMLGPEGELIPDRVIEKPPSAELRADQKD 471 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLPPY +LD I++ +++ E S + ++ +TV+ +EHL++ SEYKR Q+ G ++ Sbjct: 472 EDSLPPYGVLDAILEGLIDREASVAELVADGFDLDTVKKIEHLIFISEYKRFQSAPGARL 531 Query: 539 TAKSFGRDRLYPISNKFRD 557 T ++F DR YPI N++RD Sbjct: 532 TKRAFWLDRRYPIVNRWRD 550 >gi|93005127|ref|YP_579564.1| NAD+ synthetase [Psychrobacter cryohalolentis K5] gi|92392805|gb|ABE74080.1| NAD+ synthetase [Psychrobacter cryohalolentis K5] Length = 567 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/559 (42%), Positives = 329/559 (58%), Gaps = 33/559 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + A+AQ + +VGDI N K R +A QG D+I+F EL + GYPP+DL+ + S Sbjct: 30 VTFALAQSHFLVGDIKANAEKMRTLALQAREQGADVIIFPELALLGYPPQDLLLRPSLSG 89 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 SA+ TL SD D ++VG+P D G NS IL G+ K LPNY F Sbjct: 90 RIKSALSTL-SDIDD--IVMIVGYPHVDHHGTFNSAAILHNGHQKGFYHKQILPNYGVFD 146 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G + ++ I +G+LICED+W+ I + LKKQGA+ + SLNASP+ K Sbjct: 147 ERRYFDKGRNQVLFDYKGITIGLLICEDLWEKGPIAE-LKKQGADLIVSLNASPFEIEKQ 205 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R ++ + +LPI+Y+N VGGQD+L+FDG S +A + F Q + Sbjct: 206 DTRKTMLAKRSRENNLPIVYLNAVGGQDDLVFDGGSMAIQADGSVAHEASRFMNQLLLAS 265 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 +D + +++ D+ + + L E Y A V+ LRDYV + F +I+GLSGGID Sbjct: 266 --FDAKTAKF-----DTQAKAPLSLSRESEMYQALVVGLRDYVNLSGFTGIIVGLSGGID 318 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL IAVDALG + V +M+PY+YTS SLEDA A A+ L Y V PI D V Sbjct: 319 SALTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIFDAVEGIRH 378 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + P+ ENIQ+R RG +LMALSN +++TT NKSE++VGY TLYGDM+G Sbjct: 379 TLAPLFNKSPADTTEENIQARARGVVLMALSNKFGHLVITTGNKSELAVGYSTLYGDMAG 438 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF+ LKD+YK+QV++LAS+RN T VIP ++ + PSAELRP Q DQ+SLP Sbjct: 439 GFDVLKDVYKSQVYKLASYRNRL-------EDTPVIPERVITRPPSAELRPDQKDQDSLP 491 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND--------ETVRYVEHLLYGSEYKRRQAPVGT 536 Y +LD I+ S+I+ D Y D + V V ++ SEYKR QAP+GT Sbjct: 492 DYDVLDGILM-------SYIDEDMGYQDIINKGFDADLVAKVIQMVDNSEYKRSQAPIGT 544 Query: 537 KITAKSFGRDRLYPISNKF 555 KI+ K+FGR+R YP+ NK+ Sbjct: 545 KISHKAFGRERRYPLVNKW 563 >gi|217970173|ref|YP_002355407.1| NAD synthetase [Thauera sp. MZ1T] gi|217507500|gb|ACK54511.1| NAD+ synthetase [Thauera sp. MZ1T] Length = 542 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 228/556 (41%), Positives = 334/556 (60%), Gaps = 25/556 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA+AQLN VGD+ GN A ++A G L+L EL +SGYPPEDL+ + F + Sbjct: 9 VSIAVAQLNLTVGDLVGNADHIIAALDDARAAGAQLLLTPELALSGYPPEDLLLRPDFYR 68 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC+ ++ + + G +V+G P +D N+ +L G ++ K LPNY F Sbjct: 69 ACAREVERIAAAAR--GVTVVLGHPVEDGGERYNAASVLRDGAVLTRYHKSLLPNYEVFD 126 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F +G + +R G+ IC D+W+ A+ L +LNASPY+ NK Sbjct: 127 EERYFEAGGTACVFECAGVRFGVNICADVWERGPAEAARAAG-AQVLLALNASPYHMNKQ 185 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +R E++ +++ LP++Y N VGGQDEL+FDGASF D + Q+ F E+ Sbjct: 186 AQRLEVLRARVAETGLPVLYCNMVGGQDELVFDGASFALDAGGAVGLQLGSFVER----- 240 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++ +Y S + ++P + EA+ Y A + +RDY+ KN F IIGLSGGI Sbjct: 241 ------VAIVDYASGGWSGGEHVPARTLEAEVYEALRIGVRDYLAKNRFPGAIIGLSGGI 294 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL AIAVDALG + V+ +M+P YT+ SL+D+ LG +YD + I + F Sbjct: 295 DSALTLAIAVDALGADKVRAVMMPSPYTAQMSLDDSRDMVARLGVRYDEIAIEPAMKVFA 354 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 L++ P+ EN+Q+RIRG +LMALSN + A++LTT NKSE++ GY TLYGDM+ Sbjct: 355 ELLADQFAGLPADTTEENLQARIRGMLLMALSNKTGAIVLTTGNKSEMATGYATLYGDMA 414 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF LKDLYKT VF+L++WRN+ ++ VIP +I+++ PSAEL+P Q DQ+SL Sbjct: 415 GGFAVLKDLYKTFVFRLSNWRNT---------VSPVIPQNIIDRPPSAELKPDQKDQDSL 465 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD II+ +E +ES + + + VR V +L +EYKRRQAPVG ++T + Sbjct: 466 PPYDMLDAIIQAYMERDESPRDIVAAGFPEGEVRRVVGMLKRNEYKRRQAPVGIRVTQRG 525 Query: 543 FGRDRLYPISNKFRDH 558 FGRD YPI+++++D Sbjct: 526 FGRDWRYPITSRYQDE 541 >gi|94501751|ref|ZP_01308265.1| NAD synthase [Oceanobacter sp. RED65] gi|94426151|gb|EAT11145.1| NAD synthase [Oceanobacter sp. RED65] Length = 543 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/562 (40%), Positives = 340/562 (60%), Gaps = 27/562 (4%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + L + +AQLN VVGDI N K + +++ +G+D+++F EL ++GYPPEDL+ + S Sbjct: 4 QSLSVCLAQLNLVVGDIQSNTQKVLASAKQSVEKGVDVVIFPELTLTGYPPEDLLLRPSL 63 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A+ ++ +V+G+P+ G+ N +++ G ++A K +LPN+ Sbjct: 64 KLRVEQALQEIEEAALP--ITLVIGYPKVTASGLQNMAGVIENGRLVAEYAKQHLPNFQV 121 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR FI G + + + + I ICEDIW+ I K+ GA+ + +LNASP++ + Sbjct: 122 FDEKRYFIEGTQPCVVQIKGLPVAISICEDIWQK-GIMTQAKQAGAKLMLNLNASPFHID 180 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R ++ + +PI+YVN VGGQDEL+FDG S D Q + + + E + Sbjct: 181 KPLHREALLKERALEGAMPIVYVNLVGGQDELVFDGGSVVVDQQGNVKSRAITYDEAQPV 240 Query: 243 TEWHYDQQLSQWNYMSDDSASTM---YIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIG 298 E D D + S++ P +E+ ++ Y+A VL +DYV KN F V++G Sbjct: 241 VELAID----------DGAVSSIDGKTEPHREKLDSIYSALVLGTKDYVNKNGFKGVVLG 290 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A+AVDALGKE VQ IM+P+KYTS SL DA A LG +Y V+PI + Sbjct: 291 LSGGIDSALTLAVAVDALGKERVQAIMMPFKYTSQMSLHDAEDEANRLGVEYKVMPIEPM 350 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + F ++ + EN+QSR RG +LMA+SN +++LTT NKSE++VGY TL Sbjct: 351 FDAFMGTLADEFEGTKVDTTEENLQSRCRGVLLMAMSNKKGSLVLTTGNKSEMAVGYATL 410 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GG+ LKD++KT VF+L+ +RN+ G EVIPP ++ + PSAEL P Q Sbjct: 411 YGDMAGGYGVLKDVFKTLVFELSKYRNTLG---------EVIPPRVISRPPSAELAPDQV 461 Query: 479 DQESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D++SLP YP+LD+I++ +E ++S + + ++ V V L+ +EYKRRQAPVG + Sbjct: 462 DEDSLPAYPVLDEILRLYIEEDQSAQAIIAKGFKEDEVNRVIRLVDINEYKRRQAPVGVR 521 Query: 538 ITAKSFGRDRLYPISNKFRDHI 559 +T + FGRDR YPI+N +R I Sbjct: 522 LTQRGFGRDRRYPITNGWRAGI 543 >gi|71064847|ref|YP_263574.1| putative NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase [Psychrobacter arcticus 273-4] gi|71037832|gb|AAZ18140.1| putative NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase [Psychrobacter arcticus 273-4] Length = 567 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 235/552 (42%), Positives = 330/552 (59%), Gaps = 19/552 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + A+AQ + +VGDI N K R +A QG D+I+F EL + GYPP+DL+ + S Sbjct: 30 VTFALAQSHFLVGDIKANAEKMRTLALQAREQGADVIIFPELALLGYPPQDLLLRPSLSG 89 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 SA+ TL SD D ++VG+P D G NS IL G+ K LPNY F Sbjct: 90 RIKSALSTL-SDIDD--IVMIVGYPHVDHHGTFNSAAILHNGHQKGFYHKQILPNYGVFD 146 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G + ++ I +G+LICED+W I + LKKQGA+ + SLNASP+ K Sbjct: 147 ERRYFDKGRNQVLFDYKGITIGLLICEDLWGKGPIAE-LKKQGADLIVSLNASPFEIEKQ 205 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R ++T + +LPI+Y+N VGGQD+L+FDG S +A + F Q + Sbjct: 206 DARKTMLTKRSRENNLPIVYLNAVGGQDDLVFDGGSMAIQADGSVAHEASRFMNQLLLAS 265 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 +D + +++ D + + L E Y A V+ LRDYV + F +I+GLSGGID Sbjct: 266 --FDVKTAKF-----DIQAKAPLSLSRESEMYQALVVGLRDYVNLSGFTGIIVGLSGGID 318 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL IAVDALG + V +M+PY+YTS SLEDA A A+ L Y V PI D V Sbjct: 319 SALTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIFDAVEGIRH 378 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + P+ ENIQ+R RG +LMALSN +++TT NKSE++VGY TLYGDM+G Sbjct: 379 TLAPLFNKSPADTTEENIQARARGVVLMALSNKFGHLVITTGNKSELAVGYSTLYGDMAG 438 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF+ LKD+YK+QV++LAS+RN T VIP ++ + PSAELRP Q DQ+SLP Sbjct: 439 GFDVLKDVYKSQVYKLASYRNRL-------EDTPVIPERVITRPPSAELRPDQKDQDSLP 491 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y +LD I+ ++ + + + D+ ++ + V V ++ SEYKR QAP+GTKI+ K+F Sbjct: 492 DYDVLDGILMSYIDEDMGYQDIVDKGFDADLVAKVIQMVDNSEYKRSQAPIGTKISHKAF 551 Query: 544 GRDRLYPISNKF 555 GR+R YP+ NK+ Sbjct: 552 GRERRYPLVNKW 563 >gi|297172743|gb|ADI23709.1| NAD synthase [uncultured Oceanospirillales bacterium HF4000_21D01] Length = 556 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 244/570 (42%), Positives = 342/570 (60%), Gaps = 33/570 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M ++L++ +AQLN +VGDI GN + + E A + DLI+F EL ++ YPPEDL+ + Sbjct: 1 MARQLRVVMAQLNLMVGDIEGNTSLVLKNAERAISEFAADLIVFPELTLTAYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S AID + D IV+GFP + N++ +L+ GN +A K LPN Sbjct: 61 PSLKLRIDRAIDAILQ--ADLPIHIVLGFPESIDGKLFNALTVLEGGNRLATYHKQCLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y F E+R F +G + P V + IRLG ICED+W+ K GA+ + ++NAS Sbjct: 119 YQVFDERRYFHAG--DKPCVLQIAGIRLGFTICEDMWEQDPF-KQAGDAGADLMININAS 175 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY+ +KL++R ++ + PIIYVN VGGQDEL+FDGAS + H+ Sbjct: 176 PYHIHKLEQRQALLKQRSIEGGFPIIYVNLVGGQDELVFDGASMAMSASGEC-----HYL 230 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDS----ASTMYIPLQEEEAD-------YNACVLSLRDY 286 NF + H L + ++ DS A IP Q A+ Y+A VL +RDY Sbjct: 231 APNFEADLH----LVNVDILNSDSQEFAAKRCEIPRQSLAAEQSSIASVYHALVLGVRDY 286 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V KN F ++GLSGGIDSAL AIAVDALGK+ VQ +M+P++YTS SL+ AA A++L Sbjct: 287 VNKNKFVGTVLGLSGGIDSALTLAIAVDALGKDRVQAVMMPFEYTSKLSLDSAAEQAQSL 346 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 +Y V+PI + F + P + +NIQ+R RG ILMA+SN + M+LTT Sbjct: 347 AVEYQVIPIRHIYAAFIEALEHEFAGMPVDVSEQNIQARCRGVILMAISNKKQLMVLTTG 406 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE +VGY TLYGDM+GGF+ LKD+ KT V+QLA++RN+ + G VIP +++ Sbjct: 407 NKSECAVGYSTLYGDMAGGFDVLKDVSKTLVYQLAAYRNTEYGSQG----EAVIPQQVID 462 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGS 525 + PSAEL P+Q DQ+SLPPY LD I++ +EN+ S E Y +E V+ V L+ + Sbjct: 463 RPPSAELAPNQLDQDSLPPYDDLDRILELYIENDYSADAIVAEGYAEEVVKKVLRLVDLN 522 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 EYKRRQ+PVG ++T + FGRDR YPI+N + Sbjct: 523 EYKRRQSPVGVRLTPRGFGRDRRYPITNAW 552 >gi|161829967|ref|YP_001596848.1| NAD+ synthetase [Coxiella burnetii RSA 331] gi|161761834|gb|ABX77476.1| NAD+ synthetase [Coxiella burnetii RSA 331] Length = 542 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/559 (41%), Positives = 331/559 (59%), Gaps = 26/559 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 +KKL I AQLN +VGDI GN I A +A +E+ DLILF EL I+ YPPEDL+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESK---ADLILFPELSITSYPPEDLL 57 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F+ + + A+ T+ + +VVG+P N ++ G I+A K L Sbjct: 58 FRPALYRRVHQALQTIADKVKN--TTVVVGYPDFIDNKCYNKAAVITDGKIVATYAKHEL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F EKR F +G I + +++GILICED+W + I K GA+ + +NAS Sbjct: 116 PNYRVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWLENPI-KQSVAAGAQLIACINAS 174 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 P+ +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + Sbjct: 175 PFAQDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLK 234 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E+ E+ D L+ PL EE+ YN VL +RDY+ KNNF +I Sbjct: 235 EELITVEFDIDDNLTILTKTPLPPE-----PLDEEKI-YNVLVLGVRDYINKNNFPGAVI 288 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I Sbjct: 289 GLSGGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTMSIEDAEGGAKALNVRTSTINIQP 348 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY T Sbjct: 349 IFEAFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKDAIVLTTGNKSEMAVGYAT 408 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q Sbjct: 409 LYGDMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQ 459 Query: 478 TDQESLPPYPILDDIIKR-IVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+ LPPY ILD+I++R I ++E+ ++ E V+ V ++ +EYKRRQAP+G Sbjct: 460 KDQDVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGI 519 Query: 537 KITAKSFGRDRLYPISNKF 555 +IT ++FG+DR YPI++ F Sbjct: 520 RITERAFGKDRRYPITSGF 538 >gi|268593219|ref|ZP_06127440.1| NAD(+) synthase [Providencia rettgeri DSM 1131] gi|291311267|gb|EFE51720.1| NAD(+) synthase [Providencia rettgeri DSM 1131] Length = 540 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/557 (40%), Positives = 340/557 (61%), Gaps = 25/557 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL I++AQLN +VGDI GN + + E D+++F+EL ++GYPPEDL+F+ Sbjct: 1 MSRKLNISLAQLNWLVGDIEGNCDRMLQVVSE-QAPNTDIVMFSELSLTGYPPEDLIFRA 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F C +D L+ + + I+VG P + + + N++ G + A K LPNY Sbjct: 60 DFEDRCLVQLDRLQKASQE--TAIIVGHPWYEGDDIYNALSFFYQGKLHARYFKQELPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F + + F+ +LG+LICEDIW + + +K GAE L ++NASPY Sbjct: 118 GVFDEPRYFTADEKTCVVEFKGYQLGLLICEDIWYDEPV-DAVKGAGAEILLTINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R +++ H+PI+Y+NQVGGQDEL+FDG S + + F+++ F EQ Sbjct: 177 INKEHIRTDLLVDHCKRTHMPIVYLNQVGGQDELVFDGGSKIIANKGKQTFKLEEFKEQV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 Q++ ++ S +++I Y A V+S RDY+ KN F+ I+GLS Sbjct: 237 ITV---------QFDELALVSEGSVFIENDPVAQVYQALVMSTRDYINKNGFNGAILGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDA+GKE+VQ +M+P++YTS S+ DA A LG ++D++ I + + Sbjct: 288 GGIDSGLTVAIAVDAIGKEHVQAVMMPFRYTSEMSIHDAKEQADLLGVEFDIVSIEPMFD 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 348 AFMAQLTPMFEGTAVDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 408 DMAGGFDVLKDVPKTLVFELAKYRNT---------ISPAIPQRVIDRPPSAELAPGQLDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINN--DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLPPY +LD +++ VE + S +N+ ++ + VR V L+ +EYKRRQAPVG +I Sbjct: 459 DSLPPYDVLDALLEGYVEKDLS-VNDLIKLGFDKDVVRKVVRLVDINEYKRRQAPVGPRI 517 Query: 539 TAKSFGRDRLYPISNKF 555 T ++FG+DR YPI++ F Sbjct: 518 TMRNFGKDRRYPITSGF 534 >gi|150021282|ref|YP_001306636.1| NAD synthetase [Thermosipho melanesiensis BI429] gi|149793803|gb|ABR31251.1| NAD+ synthetase [Thermosipho melanesiensis BI429] Length = 574 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 227/580 (39%), Positives = 340/580 (58%), Gaps = 34/580 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K+++ I QLN +GD GN+ K A + A + D ++F ELF++GYPPEDLV + SF+ Sbjct: 2 KIRVTIVQLNAHLGDFDGNLKKIYNAIDIAEKNQSDFVVFPELFLTGYPPEDLVLRTSFL 61 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + I+ + S + D I++G+ + + NS+ I+ G + K LPNYS F Sbjct: 62 KKNIEYINKIVSYSKDKKTVILIGYIDVEDDA-FNSLAIIHNGKFLGKYHKHLLPNYSVF 120 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F SG I + +I++GI ICEDIW + G + + + +ASPY++ K Sbjct: 121 DEHRYFKSGNEITIIEYNNIKIGINICEDIWSPIGPLHYQVLNGTQLIINSSASPYFYGK 180 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 K R + ++ + H PI+Y N VGGQDE++FDG S + + ++ K F E+ Sbjct: 181 RKLRKKYLSTKSYDYHCPIVYCNLVGGQDEVVFDGGSIVTTSEGNIMYECKPFEEEIVTL 240 Query: 244 EWHYDQQLS------QWNYMSDD--------------------SASTMYIPLQEEEADYN 277 + ++ L + ++S + ST L+ EE + Sbjct: 241 DIPIEENLRTNLQDPRRRHISSTKIPNINIIKISNKIERKTKINVSTKNFSLKREEEIFK 300 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A L LRDY+ KN F KV+IGLSGG+DS+L AAIAV+ALGK+NV I++P Y+S S+E Sbjct: 301 AVTLGLRDYIIKNGFKKVVIGLSGGMDSSLVAAIAVEALGKDNVLGILMPSMYSSSHSIE 360 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 DA A+ LG KY ++ I ++ F + + + I EN+Q+RIRG ILMA+SN Sbjct: 361 DAKNLAENLGIKYYIIKIENIYYSFVNELKEIFSNTKEDITEENLQARIRGTILMAISNK 420 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 ++L T NKSEI+ GY TLYGDM GGF+P+KD+YKT V+++A W N Sbjct: 421 FGHIVLATGNKSEIATGYSTLYGDMVGGFSPIKDVYKTDVYKMAKWYNKF-------KGK 473 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRY 517 E+IP ++ K PSAELRP+Q DQ++LPPY ILD+I+K +E E S ++++ ETV+Y Sbjct: 474 EIIPQNVFVKPPSAELRPNQKDQDTLPPYEILDEILKLYIEKELSVEEISEKFDKETVKY 533 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +EYKRRQ +G K++ +SFG+DR PI++K+++ Sbjct: 534 VAKLVDKNEYKRRQGVIGVKVSERSFGKDRRMPITSKYKE 573 >gi|188997459|ref|YP_001931710.1| NAD+ synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932526|gb|ACD67156.1| NAD+ synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 573 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 240/586 (40%), Positives = 345/586 (58%), Gaps = 44/586 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+++A+AQ+NPVVGD N K E+A + D++ F EL ++GYPPEDL+ K S Sbjct: 1 MKKIRLALAQINPVVGDFEYNYNKILEFIEKAKKLEADIVAFPELVLTGYPPEDLILKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ ++ LK + + A VVGF + QE V N+ ++ I+ V K LPNY Sbjct: 61 FIEKNLQHLEKLKENIDNIIA--VVGFIDK-QEDVFNAAAVIYNKEIVGVYHKQFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F G + + ++GI ICEDIW N GAE + ++NASPY Sbjct: 118 VFDENRYFQKGDGLLLLSIDNYKVGISICEDIWYPENPVNDYAILGAEVVININASPYSQ 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+KKR E++ + + I YVN VGGQDEL+FDG S D Q ++ + + F E+ Sbjct: 178 GKVKKREEMLKVRSRDNLISIAYVNMVGGQDELVFDGNSLILDAQGEILAKAESFEEELL 237 Query: 242 MTEWHYDQ---------QLSQWNYM------------------SDDSASTMYIPLQEEEA 274 + + D+ +L Y+ ++ + + + +E E Sbjct: 238 LADIDLDEIFRLQLKDNRLKNLRYLKKPINVKEVRLDYKIKNKNNQISQKIALDKKEIED 297 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 +Y A V+ LRDY+ KN F KV+IGLSGGIDS+L A IAVDALGKENV+ +++P YTS + Sbjct: 298 NYKALVVGLRDYINKNGFKKVVIGLSGGIDSSLTACIAVDALGKENVKGVLMPSHYTSKE 357 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 S+EDA AK L + +PI ++ + + + + EN+Q+RIRGNILMAL Sbjct: 358 SIEDAIELAKNLDIETFTIPIKNIFDKYLEEFQEIFKGLKPDTTEENLQARIRGNILMAL 417 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN +++ T NKSE+SVGY TLYGDM GGF LKD+ KT+V++L+ +RNS Sbjct: 418 SNKFGWIVIATGNKSEMSVGYSTLYGDMVGGFAVLKDVLKTKVYELSYYRNS-------- 469 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYN 511 +++VIP +L K PSAELRP+QTD+ L PYPILD II+ VE + E + E Sbjct: 470 -ISKVIPDRVLTKPPSAELRPNQTDEAELLPYPILDQIIQFYVEQDLTVEEIVKLGFEEK 528 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D V+ + +L+ +EYKRRQAP+G KIT ++FG+DR PI+N+F++ Sbjct: 529 D--VKKIINLIDKNEYKRRQAPIGIKITERAFGKDRRMPITNRFKE 572 >gi|29654185|ref|NP_819877.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii RSA 493] gi|29541451|gb|AAO90391.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii RSA 493] Length = 542 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/559 (41%), Positives = 331/559 (59%), Gaps = 26/559 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 +KKL I AQLN +VGDI GN I A +A +E+ DLILF EL I+ YPPEDL+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESK---ADLILFPELSITSYPPEDLL 57 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F+ + + A+ T+ + +VVG+P N ++ G I+A K L Sbjct: 58 FRPALYRRVHQALQTIADKVKN--TTVVVGYPDFIDNKCYNKAAVITDGKIVATYAKHEL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F EKR F +G I + +++GILICED+W + I K GA+ + +NAS Sbjct: 116 PNYRVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWLENPI-KQSVAAGAQLIACINAS 174 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 P+ +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + Sbjct: 175 PFAQDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLK 234 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E+ E+ D L+ PL EE+ YN VL +RDY+ KNNF +I Sbjct: 235 EELITVEFDIDDNLTILTKTPLPPE-----PLDEEKI-YNVLVLGVRDYINKNNFPGAVI 288 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I Sbjct: 289 GLSGGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTMSIEDAEGEAKALNVRTSTINIQP 348 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY T Sbjct: 349 IFEAFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKDAIVLTTGNKSEMAVGYAT 408 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q Sbjct: 409 LYGDMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQ 459 Query: 478 TDQESLPPYPILDDIIKR-IVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+ LPPY ILD+I++R I ++E+ ++ E V+ V ++ +EYKRRQAP+G Sbjct: 460 KDQDVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGI 519 Query: 537 KITAKSFGRDRLYPISNKF 555 +IT ++FG+DR YPI++ F Sbjct: 520 RITERAFGKDRRYPITSGF 538 >gi|165918537|ref|ZP_02218623.1| NAD+ synthetase [Coxiella burnetii RSA 334] gi|212212687|ref|YP_002303623.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii CbuG_Q212] gi|165917783|gb|EDR36387.1| NAD+ synthetase [Coxiella burnetii RSA 334] gi|212011097|gb|ACJ18478.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii CbuG_Q212] Length = 542 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/559 (41%), Positives = 331/559 (59%), Gaps = 26/559 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 +KKL I AQLN +VGDI GN I A +A +E+ DLILF EL I+ YPPEDL+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESK---ADLILFPELSITSYPPEDLL 57 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F+ + + A+ T+ + +VVG+P N ++ G I+A K L Sbjct: 58 FRPALYRRVHQALQTIADKVKN--TTVVVGYPDFIDNKCYNKAAVITDGKIVATYAKHEL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F EKR F +G I + +++GILICED+W + I K GA+ + +NAS Sbjct: 116 PNYRVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWLENPI-KQSVAAGAQLIACINAS 174 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 P+ +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + Sbjct: 175 PFAQDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLK 234 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E+ E+ D L+ PL EE+ YN VL +RDY+ KNNF +I Sbjct: 235 EELITVEFDIDDNLTILTKTPLPPE-----PLDEEKI-YNVLVLGVRDYINKNNFPGAVI 288 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I Sbjct: 289 GLSGGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTMSIEDAEGEAKALNVRTSTINIQP 348 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY T Sbjct: 349 IFEAFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKGAIVLTTGNKSEMAVGYAT 408 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q Sbjct: 409 LYGDMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQ 459 Query: 478 TDQESLPPYPILDDIIKR-IVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+ LPPY ILD+I++R I ++E+ ++ E V+ V ++ +EYKRRQAP+G Sbjct: 460 KDQDVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGI 519 Query: 537 KITAKSFGRDRLYPISNKF 555 +IT ++FG+DR YPI++ F Sbjct: 520 RITERAFGKDRRYPITSGF 538 >gi|255261836|ref|ZP_05341178.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Thalassiobium sp. R2A62] gi|255104171|gb|EET46845.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Thalassiobium sp. R2A62] Length = 554 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 232/561 (41%), Positives = 329/561 (58%), Gaps = 11/561 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQ+NP VGD+ GN KA A + G D+++ E+F+ GY +DLV K Sbjct: 1 MPDQFRLTMAQMNPTVGDLVGNADKAFAAWQMGVDAGSDMVVCPEMFLIGYQAQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLP 118 +F+ + + L + DG + + VG P D E + N+ IL G + A K LP Sbjct: 61 AFVHSAMDMVMNLAARCADGPS-LGVGAPFLDPESGRLYNAYWILKGGKVAARMLKHFLP 119 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 N++ F E R F G + P +R+G ICED W ++C+ + + GAE L N SP Sbjct: 120 NFNVFDEVRLFNRGATQGPYDVGGVRIGSPICEDAWY-VDVCETMVESGAEILVIPNGSP 178 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y+ +K R + ++ +P++Y+N VGGQD+ +FDG SF + +LA QM F E Sbjct: 179 YFRDKFDIRMNHMVSRVIENDVPLVYLNMVGGQDDQVFDGGSFVLNRGGKLALQMPTFDE 238 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + + + W + + A+ +P E DY CV LRDY+ K F KV++G Sbjct: 239 AYAHVD--FTRTSDGWEAIEGERAT---LP-DSLEQDYRVCVEGLRDYMGKTGFKKVLLG 292 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSA+ A IA DALG NV+ +MLP +YTS SL+DAA CA +GC D + I Sbjct: 293 LSGGIDSAIVATIAADALGPGNVRCVMLPSEYTSQASLDDAAQCAHNIGCNLDTVSIAGP 352 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 ++ + G+ ENIQSR+RG +LMA SN MLLTT NKSE++VGY T+ Sbjct: 353 RAAVTDALAPLFEGLEEGLTEENIQSRLRGVLLMAQSNKFGEMLLTTGNKSEVAVGYATI 412 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDMSGG+NP+KD+YKT+VF + WRN++ + P ++P I+EK P+AELR Q Sbjct: 413 YGDMSGGYNPIKDMYKTRVFDICRWRNANHRPWMMAPAGTMVPVEIIEKPPTAELREDQK 472 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D +SLPPY ILD I+ +V+ E S + Y ETV+ VEHL+Y SEYKR Q+ G + Sbjct: 473 DSDSLPPYDILDGILTMLVDQEASVADCVAVGYERETVKKVEHLIYISEYKRFQSAPGPR 532 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T +F DR YPI N++RDH Sbjct: 533 LTDSAFWLDRRYPIVNRWRDH 553 >gi|154706227|ref|YP_001424305.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii Dugway 5J108-111] gi|154355513|gb|ABS76975.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii Dugway 5J108-111] Length = 542 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/559 (41%), Positives = 331/559 (59%), Gaps = 26/559 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 +KKL I AQLN +VGDI GN I A +A +E+ DLILF EL I+ YPPEDL+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESK---ADLILFPELSITSYPPEDLL 57 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F+ + + A+ T+ + +VVG+P N ++ G I+A K L Sbjct: 58 FRPALYRRVHQALQTIADKVKN--TTVVVGYPDFIDNKCYNKAAVIADGKIVATYAKHEL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F EKR F +G I + +++GILICED+W + I K GA+ + +NAS Sbjct: 116 PNYRVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWLENPI-KQSVAAGAQLIACINAS 174 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 P+ +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + Sbjct: 175 PFAQDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLK 234 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E+ E+ D L+ PL EE+ YN VL +RDY+ KNNF +I Sbjct: 235 EELITVEFDIDDNLTILTKTPLPPE-----PLDEEKI-YNVLVLGVRDYINKNNFPGAVI 288 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I Sbjct: 289 GLSGGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTMSIEDAEGKAKALNVRTSTINIQP 348 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY T Sbjct: 349 IFEAFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKGAIVLTTGNKSEMAVGYAT 408 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q Sbjct: 409 LYGDMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQ 459 Query: 478 TDQESLPPYPILDDIIKR-IVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+ LPPY ILD+I++R I ++E+ ++ E V+ V ++ +EYKRRQAP+G Sbjct: 460 KDQDVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGI 519 Query: 537 KITAKSFGRDRLYPISNKF 555 +IT ++FG+DR YPI++ F Sbjct: 520 RITERAFGKDRRYPITSGF 538 >gi|313903243|ref|ZP_07836636.1| NH(3)-dependent NAD(+) synthetase [Thermaerobacter subterraneus DSM 13965] gi|313466554|gb|EFR62075.1| NH(3)-dependent NAD(+) synthetase [Thermaerobacter subterraneus DSM 13965] Length = 621 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 239/615 (38%), Positives = 343/615 (55%), Gaps = 69/615 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQ+N VGD+ GN K R +A + G DL++F EL ++GYPPEDLVF+ +F+ Sbjct: 8 LRIAVAQVNVTVGDLEGNARKLARFAADAAQTGADLVVFPELALTGYPPEDLVFRPAFLD 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + L + G +V GF +D++ + N+ +L G I AV K LPNY F Sbjct: 68 ATRHWLGWLAGELAAGPVALV-GFVHRDRD-LYNAAAVLQGGQIKAVACKRFLPNYGVFD 125 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIW-KNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F G + R + LG+ ICED+W + I + GAE L +L+ASPY+ K Sbjct: 126 EKRYFAPGRRALVLHLRGVALGVSICEDLWYPHGPIREQALAGGAEILLNLSASPYHMGK 185 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF-- 241 ++R ++ + + + + I+Y N VGGQDEL+FDG S D Q+A + + F+E F Sbjct: 186 PREREGLLITRATDLGVAIVYANLVGGQDELVFDGHSLVVDAGGQVAARGRPFAEDLFFW 245 Query: 242 --------MTEWH---------YDQQLSQWNYMSDDS----------------------- 261 + WH ++ +Q ++ D Sbjct: 246 DYDPAAAAVARWHEPRYRHMPVTPEEAAQVEHVDLDEPAAGGGPGGRLPGPVAGPGVAVP 305 Query: 262 ----------ASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 AS +P L+ E Y A VL+LRDY +KN F + +GLSGGIDS Sbjct: 306 GVAGPGTAPEASRPPLPPRQVEVLEGEAEVYAALVLALRDYFEKNGFRRAWLGLSGGIDS 365 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 AL A +A DALG V + +P +TS SL+DA A A+ LG + +PI ++ F Sbjct: 366 ALVACLAADALGPRQVTGVRMPSPFTSAASLDDAEAVARNLGIGLETIPIGEIFGAFRQA 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 ++ + P + EN+Q+RIRG +LMAL+N ++L T NKSE++ GY TLYGDM+GG Sbjct: 426 LAPLFGDRPFDVAEENLQARIRGTLLMALANKFGGLVLATGNKSELATGYATLYGDMAGG 485 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 F PLKD+ KT V++LA++RN P VIP S+LEK+P+AELRP Q D++SLPP Sbjct: 486 FAPLKDVPKTLVYRLAAYRNGW-------PGGPVIPRSVLEKAPTAELRPGQKDEDSLPP 538 Query: 486 YPILDDIIKRIVENE-ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 Y +LD I++ VE + + + E VR HL+ SEYKRRQA G KITA++FG Sbjct: 539 YAVLDPILEAYVERDLPAAALVARGLPAEAVRRTVHLVATSEYKRRQAAPGPKITARAFG 598 Query: 545 RDRLYPISNKFRDHI 559 RDR YPI++ +R+ + Sbjct: 599 RDRRYPITSGYREAV 613 >gi|153209220|ref|ZP_01947286.1| NAD+ synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212218339|ref|YP_002305126.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii CbuK_Q154] gi|120575475|gb|EAX32099.1| NAD+ synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212012601|gb|ACJ19981.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii CbuK_Q154] Length = 542 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 233/559 (41%), Positives = 331/559 (59%), Gaps = 26/559 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 +KKL I AQLN +VGDI GN I A +A +E+ DLILF EL I+ YPPEDL+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESK---ADLILFPELSITSYPPEDLL 57 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F+ + + A+ T+ + +VVG+P N ++ G I+A K L Sbjct: 58 FRPALYRRVHQALQTIADKVKN--TTVVVGYPDFIDNKCYNKAAVITDGKIVATYAKHEL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F EKR F +G I + +++GILICED+W + I K GA+ + +NAS Sbjct: 116 PNYRVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWLENPI-KQSVAAGAQLIACINAS 174 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 P+ +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + Sbjct: 175 PFAQDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLK 234 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E+ E+ D L+ PL EE+ YN VL +RDY+ KNNF +I Sbjct: 235 EELITVEFDIDDNLTILTKTPLPPE-----PLDEEKI-YNVLVLGVRDYINKNNFPGAVI 288 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I Sbjct: 289 GLSGGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTISIEDAEGEAKALNVRTSTINIQP 348 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY T Sbjct: 349 IFEAFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKGAIVLTTGNKSEMAVGYAT 408 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q Sbjct: 409 LYGDMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQ 459 Query: 478 TDQESLPPYPILDDIIKR-IVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+ LPPY ILD+I++R I ++E+ ++ E V+ V ++ +EYKRRQAP+G Sbjct: 460 KDQDVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGI 519 Query: 537 KITAKSFGRDRLYPISNKF 555 +IT ++FG+DR YPI++ F Sbjct: 520 RITERAFGKDRRYPITSGF 538 >gi|145588869|ref|YP_001155466.1| NAD+ synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047275|gb|ABP33902.1| NAD+ synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 539 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 234/559 (41%), Positives = 331/559 (59%), Gaps = 33/559 (5%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 KIA+AQ+NP++GD+ GN +A ++A +QG L++ EL ++GYPPEDL+ + +FIQA Sbjct: 5 KIALAQINPLLGDLGGNAQLILKASQDAFKQGAKLVVTPELSLTGYPPEDLLLRPAFIQA 64 Query: 66 CSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D L + T ++VG P+Q G+ N +L G +IA K LPN+ F Sbjct: 65 SERELDLLMQELTAYPDLTVIVGHPKQTDAGLQNYASVLRNGKVIAGYAKQELPNHEVFD 124 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E R F+ G N VF I G+++CED W + K GA+ L NASPY+ Sbjct: 125 EVRYFVPG--NRACVFECAGIHYGLILCEDAW-HPGPAKQSHAAGAQILLVPNASPYHLK 181 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R +++ I H+P++YVN VGGQDEL+FDG SF + ++ + F Sbjct: 182 KEALRIDVLRSHIHKTHMPLVYVNSVGGQDELVFDGGSFALNATGEVVMALPQFETALGY 241 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E QL + + +P E Y A VL +RDYV KN F VIIGLSGG Sbjct: 242 VEVSSAGQLKK---------GVIALPQSVEAQAYQALVLGVRDYVTKNRFPGVIIGLSGG 292 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +DSAL A+AVDALG + V+ +M+ +YT+ S DA A LG +YD +PI V+ Sbjct: 293 VDSALVLAVAVDALGADKVRAVMMASRYTADISWIDARELADNLGVRYDEIPISGPVDA- 351 Query: 363 FSLMSQFLQEEPSGI----VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + Q L E+ G+ ENIQ+R+RG +LMALSN + ++LTT NKSE++VGY TL Sbjct: 352 ---LEQSLAEQFKGMKVDATEENIQARVRGTMLMALSNKTGRLVLTTGNKSEMAVGYCTL 408 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGF +KD+ KT V++L ++RNS + VIP IL ++PSAELRP QT Sbjct: 409 YGDMAGGFAVIKDIAKTLVYRLCAYRNS---------IKPVIPERILTRAPSAELRPDQT 459 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLP Y +LD I++R +E +S ++ E+V V L+ +EYKRRQAP G + Sbjct: 460 DQDSLPSYEVLDGIVERYMEQNQSIEEMIAAGFDAESVEKVTRLIKLNEYKRRQAPPGVR 519 Query: 538 ITAKSFGRDRLYPISNKFR 556 +T ++FGRD YPI+++FR Sbjct: 520 VTTRAFGRDWRYPITSQFR 538 >gi|302878486|ref|YP_003847050.1| NAD+ synthetase [Gallionella capsiferriformans ES-2] gi|302581275|gb|ADL55286.1| NAD+ synthetase [Gallionella capsiferriformans ES-2] Length = 534 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 237/562 (42%), Positives = 331/562 (58%), Gaps = 37/562 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQ+N V+GD+AGN AK A + A + G L+L EL + GYPPEDL+ + F + Sbjct: 1 MKLAIAQINCVLGDLAGNSAKILHAAQRACQAGAQLMLTPELSLCGYPPEDLLLRNGFYK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +C++++ L + D ++VG P + N+ +L G + A K LPNY+ F Sbjct: 61 SCAASLSELARNISD--IAVIVGHPHEQDGKRYNAASLLRDGRVEATYFKHFLPNYAVFD 118 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E+R F G N P+VF + G+ ICED+W S + + GA+ L LNASPY Sbjct: 119 EERYFSCG--NAPMVFEMSGVHFGVNICEDVW-GSEAARVAAQAGADVLLVLNASPYSVE 175 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 KL RHE+V +++ + ++Y N VGGQDEL+FDG SF D +L Q F E Sbjct: 176 KLASRHEVVRQRVAETDMAVVYANMVGGQDELVFDGGSFAMDRSGRLIAQSAIFEET--- 232 Query: 243 TEWHYDQQLSQWNYMSDD-----SASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Y+S D S +P+QE A Y A VL LRDYV KN F V++ Sbjct: 233 -----------LSYVSLDAHGVPSGEIAVLPMQEA-AVYQAMVLGLRDYVGKNRFPGVLL 280 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL A+AVDALG + V +M+P YT+ SL+D+ + LG +YD I Sbjct: 281 GLSGGIDSALTLAVAVDALGADRVHAVMMPSPYTAQISLDDSREMIRILGVRYDEFSIEP 340 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 ++ + S++ P EN+Q+RIRGN+LMALSN A++LTT NKSE+SVGY T Sbjct: 341 VMESYLSVLRASFAGRPEDTTEENLQARIRGNLLMALSNKLGALVLTTGNKSEMSVGYAT 400 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF+ LKD+ K V++LA +RN+ G +VIP I+ ++PSAELR Q Sbjct: 401 LYGDMAGGFSVLKDVGKLLVYRLARYRNTQG---------QVIPERIITRAPSAELRHDQ 451 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ++LPPY +LD I+ VE S Y + VR V L+ SEYKRRQ+ G Sbjct: 452 TDQDNLPPYEVLDGIMACYVEKNLSIPEVIAAGYQEADVRRVVRLIQSSEYKRRQSATGV 511 Query: 537 KITAKSFGRDRLYPISNKFRDH 558 +IT + +G+D YPI+ +++D Sbjct: 512 RITERGYGKDWRYPITVRYQDQ 533 >gi|256822303|ref|YP_003146266.1| NAD+ synthetase [Kangiella koreensis DSM 16069] gi|256795842|gb|ACV26498.1| NAD+ synthetase [Kangiella koreensis DSM 16069] Length = 539 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/559 (40%), Positives = 337/559 (60%), Gaps = 34/559 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQ N VGDI N+ + + ++A D+++F+EL + GYPPEDL+ + Sbjct: 1 MRIAIAQNNYTVGDIQRNLELIKSSVKQAELDNADIVVFSELSLCGYPPEDLLLRPDLYT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++ L + D +V+G P ++ EG+ N ++ G ++ K LPNYS F Sbjct: 61 IIDNAVEDLLA--LDSQVAMVIGHPIKEAEGLFNVATVIHRGQLLVQYKKQLLPNYSVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F SG + F+ ++LG+L+CED+W + +K GA+ L S NASPY + K Sbjct: 119 EKRYFESGSEDCVFEFKGLKLGLLVCEDLWYPEPTAR-VKALGADILLSPNASPYCYGKG 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R + + LPI+YVNQ+GGQDELIFDG S ++ + Q FQM +E Sbjct: 178 TLRSAEMGSRARENELPIVYVNQIGGQDELIFDGCSAVYNEEGQRIFQMAEMAED----- 232 Query: 245 WHYDQQLSQWNYMSDDSASTMYIP-------LQEEEADYNACVLSLRDYVQKNNFHKVII 297 + Y+ D + P EE + A VL +RDY KN F ++ Sbjct: 233 ---------FAYIDFDPKTGAIKPSKPYLNQFHGEEEIWQALVLGVRDYAHKNGFKGALL 283 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSA+ A+AVDALGKENV +M+P++YT+ S+EDA AKALG ++DV+ I Sbjct: 284 GLSGGIDSAVTLAVAVDALGKENVNAVMMPFRYTASMSIEDAEEEAKALGIEFDVISIEP 343 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + F S +S ++ + + +NIQ+R RG +LMALSN ++LTT NKSE++VGY T Sbjct: 344 MYEAFMSQLSHQFKDTEADLTEQNIQARCRGTLLMALSNKFGRLVLTTGNKSEVAVGYCT 403 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GG + LKD+ KT V++LA +RN+ +++VIP ++ + PSAEL P Q Sbjct: 404 LYGDMAGGLDVLKDVSKTMVYRLARYRNT---------VSQVIPERVITRPPSAELAPDQ 454 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 D+++LPPY ILD I++ VE ++S + +++E VR V L+ +E+KRRQAP G Sbjct: 455 KDEDNLPPYDILDAILEAYVEQDKSLDDIIALGHDEEVVRRVIRLVDINEHKRRQAPPGI 514 Query: 537 KITAKSFGRDRLYPISNKF 555 +IT ++FGRDR YPI++ F Sbjct: 515 RITQRAFGRDRRYPITSGF 533 >gi|253998620|ref|YP_003050683.1| NAD+ synthetase [Methylovorus sp. SIP3-4] gi|253985299|gb|ACT50156.1| NAD+ synthetase [Methylovorus sp. SIP3-4] Length = 550 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 234/557 (42%), Positives = 333/557 (59%), Gaps = 25/557 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++++AIAQ+N VVGD+AGN A+ EA G +L+L EL +SGY P+DL+ ++ F Sbjct: 10 QMQVAIAQINCVVGDLAGNAARILSYAHEAKAAGANLMLTPELALSGYSPQDLLLREDFT 69 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 C + L + +VVG P ++ N+ +L G I+ K LPN+S F Sbjct: 70 HHCQRELQAL-AKALPADITVVVGHPHREHGRCYNAASVLQGGRIVLTYHKHALPNHSVF 128 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F G + +R GILIC D+W+ K K+ GAE L LNASP++ K Sbjct: 129 DEVRYFSPGNKAGVFEHQGVRCGILICADVWE-PGPAKVSKQAGAELLLVLNASPFHLEK 187 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++R++++ ++ LP++Y N VGGQDEL+FDG S D Q+ F+EQ + Sbjct: 188 QQQRYKVLGKRVEETGLPLVYANLVGGQDELVFDGNSVVIDRCGAPVQQLPAFTEQLALV 247 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 Q ++ N + D A L EE+ Y A L LRDYVQKN F ++GLSGGI Sbjct: 248 SIDLSPQ-NRANPLPADIAPG----LTREESAYQALTLCLRDYVQKNGFPGAVLGLSGGI 302 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL AIAVDALG + V +M+P ++T+ S++DA A+ LG KY LPI L + F Sbjct: 303 DSALTLAIAVDALGADKVHAVMMPSEFTADMSVDDARQMAQLLGVKYTELPIKPLFDQFC 362 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + +++ I EN+Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM+ Sbjct: 363 ATLAEPFAGTSFDITEENLQARIRGMLLMALSNKFGSIVLTTGNKSEMAVGYSTLYGDMA 422 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF LKD+ KT V++LA +RNS L++VIP I+ + PSAELR QTDQ+SL Sbjct: 423 GGFAVLKDISKTLVYRLARYRNS---------LSQVIPERIIIRPPSAELRHGQTDQDSL 473 Query: 484 PPYPILDDIIKRIVENEESFINNDQE-----YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 PPY +LD I++ VE + S QE Y ++ V V +L+ +EYKRRQ+P+G ++ Sbjct: 474 PPYDVLDAIMEAYVERDSS----RQEIIAMGYREQDVARVLNLIDRNEYKRRQSPIGVRV 529 Query: 539 TAKSFGRDRLYPISNKF 555 T + FG DR YP+ ++F Sbjct: 530 TERGFGLDRRYPVVSRF 546 >gi|170289348|ref|YP_001739586.1| NAD+ synthetase [Thermotoga sp. RQ2] gi|281412952|ref|YP_003347031.1| NAD+ synthetase [Thermotoga naphthophila RKU-10] gi|170176851|gb|ACB09903.1| NAD+ synthetase [Thermotoga sp. RQ2] gi|281374055|gb|ADA67617.1| NAD+ synthetase [Thermotoga naphthophila RKU-10] Length = 576 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/589 (39%), Positives = 345/589 (58%), Gaps = 44/589 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K+L++ +AQLNP +GD GN+ KA A A +G DL++F ELF+ GYPPEDL+ + S Sbjct: 1 MKRLRVTLAQLNPTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGYPPEDLMLRLS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ + T + G +++GF D++ N+ ++ G I+ V KI+LPNY Sbjct: 61 FLRENRKYLQKFAQHTRNLGVTVLMGFIDSDEDA-YNAAAVVKGGEILGVYRKISLPNYG 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK-KQGAEFLFSLNASPYY 180 F E+R F G + +I++G+ ICEDIW L +G + +L+ASPY+ Sbjct: 120 VFDERRYFKPGEELLVVKIGNIKVGVTICEDIWNPVEPSASLSLGEGVHLIANLSASPYH 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ + H+ + Y N VGGQDEL+FDG S D ++ K F E+ Sbjct: 180 VGKPVLRKDYLSMKAYDYHVAMAYCNMVGGQDELVFDGGSMVVDASGEVINYGKLFEEEI 239 Query: 241 FMTEWHYDQQLS------QWNYMSDDSASTMYI-------------------PLQEEEAD 275 + D+ L + YM + + P++EEE Sbjct: 240 ITVDLDLDENLRVSLVDPRRRYMKTQNYPVKTVEAGNLREKSGHFEPVVNPLPVREEEM- 298 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 + A + LRDYV+KN F KV+IGLSGG+DS+L A IA +ALGKENV+ +++P YTS +S Sbjct: 299 FRALITGLRDYVRKNGFEKVVIGLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKES 358 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFF-SLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +EDA AK LG + ++PI D+ + + +L F EP I EN+Q+RIRGN LMAL Sbjct: 359 IEDAQTLAKNLGIETFIIPITDVFHSYLETLKGVFAGREPD-ITEENLQARIRGNYLMAL 417 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-HGITSGL 453 SN ++LTT NKSE++ GY TLYGDM+GGF +KD+YKT V+++ W NS G Sbjct: 418 SNKFGWLVLTTGNKSEMATGYATLYGDMAGGFAVIKDVYKTDVYRIGRWYNSWRG----- 472 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEY 510 E+IP +I K P+AELRP QTDQE LPPY +LD+I++ +E + E + + + Sbjct: 473 ---KEIIPENIFVKPPTAELRPGQTDQEKLPPYEVLDEILRLYIEEGLDPEEIAS--KGF 527 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + +TV V ++ +EYKR+QA +G KI+ ++FG+D PI+N+F++ + Sbjct: 528 DRKTVLDVTEMIRKNEYKRKQAAIGVKISTRAFGKDWRMPITNRFKEPL 576 >gi|126733697|ref|ZP_01749444.1| NAD(+) synthase [Roseobacter sp. CCS2] gi|126716563|gb|EBA13427.1| NAD(+) synthase [Roseobacter sp. CCS2] Length = 553 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 243/559 (43%), Positives = 338/559 (60%), Gaps = 10/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L++ +AQLN VGDIAGN AR A EA DL+ E+F++GY +DLV K Sbjct: 1 MTKFLRLTMAQLNATVGDIAGNADLARAAWAEAKAAKADLVALPEMFLTGYQTQDLVAKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ + L D DG A + +G P ++E + N+ L G I+A K LPN+ Sbjct: 61 AFVADAMVHLMALAKDCADGPA-LSIGAPLVEEERLYNAYFTLRGGEIVARARKHFLPNF 119 Query: 121 SEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + F E R F S P + R+G ICED W ++C+ + + GAE L N SPY Sbjct: 120 NVFDEVRLFKSADIEGPYAHNNGARIGHPICEDAWY-PDVCEAMVESGAEILVVPNGSPY 178 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + +K R + ++ +P++Y+N VG QD+ +FDG SF + +LA QM Sbjct: 179 FRDKFPIRMNNMVSRVIENDVPLVYINLVGAQDDQMFDGGSFVLNRGGKLAVQMPLMES- 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 H D +L+ +++ D + E+ DY V +LRDY++K F KV++GL Sbjct: 238 ---ALAHVDFELTDSGWVALDGEKATLPDIIEQ--DYRVMVEALRDYMRKTGFKKVLLGL 292 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ AAIA DALG +NV+ +MLP +YTS SL+DAAA A ALGCKYD + I Sbjct: 293 SGGIDSAIVAAIATDALGADNVRCVMLPSEYTSQGSLDDAAAAADALGCKYDTISIAGPR 352 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 ++ + + ENIQSRIRG +LMA SN MLLTT NKSE++VGY T+Y Sbjct: 353 AAVTDALAPLFAGLEADLTEENIQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYATIY 412 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KD+YKT+VF+ A WRN++ GP EVIP +I++K PSAELRP Q D Sbjct: 413 GDMAGGYNPIKDMYKTRVFEAARWRNANHRDWMNGPAGEVIPVAIIDKPPSAELRPDQKD 472 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLPPY +LD I+ +V+ E S N Y+ ETV+ VEHL+Y SEYKR Q+ G ++ Sbjct: 473 EDSLPPYDVLDGILMMLVDGEASVANCAAAGYDRETVKRVEHLIYISEYKRFQSAPGPRL 532 Query: 539 TAKSFGRDRLYPISNKFRD 557 + ++F DR YPI N++RD Sbjct: 533 SDRAFWLDRRYPIVNRWRD 551 >gi|237756468|ref|ZP_04585003.1| glutamine-dependent NAD(+) synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691369|gb|EEP60442.1| glutamine-dependent NAD(+) synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 573 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 236/586 (40%), Positives = 345/586 (58%), Gaps = 44/586 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+++A+AQ+NPVVGD N K E+A + D++ F EL ++GYPPEDL+ K S Sbjct: 1 MKKIRLALAQINPVVGDFEYNYNKILEFIEKAKKLEADIVAFPELALTGYPPEDLILKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ ++ LK + + A +VGF + QE V N+ ++ I+ V K LPNY Sbjct: 61 FIEKNLYYLEKLKENVDNIIA--IVGFIDK-QEDVFNAAAVIYNKEIVGVYHKQFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F G + + ++G+ ICEDIW N GAE + ++NASPY Sbjct: 118 VFDENRYFQKGDGLLLLSIDNYKVGVSICEDIWYPENPVNDYAILGAEVVININASPYSQ 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+K+R E++ + + I YVN VGGQDEL+FDG S D Q ++ + + F E+ Sbjct: 178 GKVKRREEMLKVRSRDNLISIAYVNMVGGQDELVFDGNSLILDTQGEILAKAESFEEELL 237 Query: 242 MTEWHYDQ---------QLSQWNYM------------------SDDSASTMYIPLQEEEA 274 + + D+ +L Y+ ++ + + + +E E Sbjct: 238 LADIDLDEIFRLQLKDNRLKNLRYLKKPINVKEIRLDYKIKNKNNQISQKIALDRKEIED 297 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 Y A V+ LRDY+ KN F KV+IGLSGGIDS+L A IAVDALGKENV+ +++P +YTS + Sbjct: 298 TYKALVVGLRDYINKNGFKKVVIGLSGGIDSSLTACIAVDALGKENVKGVLMPSQYTSKE 357 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 S+EDA AK L + +PI ++ + + + + EN+Q+RIRGNILMAL Sbjct: 358 SIEDALELAKNLDIETFTIPIKNIFDKYLEEFQEIFKGLKPDTTEENLQARIRGNILMAL 417 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN +++ T NKSE+SVGY TLYGDM GGF LKD+ KT+V++L+ +RNS Sbjct: 418 SNKFGWIVIATGNKSEMSVGYSTLYGDMVGGFAVLKDVLKTKVYELSYYRNS-------- 469 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYN 511 +++VIP +L K PSAELRP+QTD+ L PYPILD II+ VE + E + E Sbjct: 470 -ISKVIPDRVLTKPPSAELRPNQTDEAELLPYPILDQIIQFYVEQDLTVEEIVKLGFEEK 528 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D V+ + +L+ +EYKRRQAP+G KIT ++FG+DR PI+N++++ Sbjct: 529 D--VKKIINLIDKNEYKRRQAPIGIKITERAFGKDRRMPITNRYKE 572 >gi|332530579|ref|ZP_08406516.1| NAD+ synthetase [Hylemonella gracilis ATCC 19624] gi|332039985|gb|EGI76374.1| NAD+ synthetase [Hylemonella gracilis ATCC 19624] Length = 565 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 246/576 (42%), Positives = 332/576 (57%), Gaps = 38/576 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++ +AQ N VVGD++GN K +A QG+ L+L EL I GY EDL+ + SFI Sbjct: 3 LRLGVAQSNFVVGDLSGNAQKIIATARQACTQGVHLLLTPELAICGYAAEDLLLRPSFIA 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG-----------VLNSVVILDAGNIIAVR 112 AC A+ T+ + D G +VVG P ++G N+ +L AG +IA Sbjct: 63 ACDEAVRTVAKELADLEGLTVVVGHPAATEDGGWRTRSVMRPGRFNAASVLRAGQVIARY 122 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFR------DIRLGILICEDIWKNSNICKHLKKQ 166 K LPNY F E+R F G + P VF R+G+LICED W + N + + Sbjct: 123 AKRELPNYQVFDERRYFEPG--DQPCVFEVEADGERTRVGLLICEDSWFD-NPARETRAA 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--- 223 GAE L +NASP++ K +R + ++ LP++Y + VGGQDE +F+G SF Sbjct: 180 GAELLAVINASPFHAGKGDERETAMAQRVRDHGLPLVYAHLVGGQDEAVFEGRSFALQPS 239 Query: 224 -DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVL 281 +G+ LA + F+E F+ + D + S P ++ +AD ++A VL Sbjct: 240 GEGEVSLAARAPSFAEDLFVMDARRDA--------AGLRLSGPIAPERDRDADLWDALVL 291 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 +RDYV KN F IIGLSGGIDSAL AIAVDALG V+T+M+P YT+ S DA Sbjct: 292 GVRDYVGKNGFPGAIIGLSGGIDSALVLAIAVDALGPAKVRTVMMPSPYTADISWIDARD 351 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A L +YD + I F + ++Q P ENIQ+RIRG +LMALSN S + Sbjct: 352 MAARLRVQYDEISIVPEFEAFKTSLAQEFAGLPEDTTEENIQARIRGTLLMALSNKSGRI 411 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +LTT NKSE++ GY TLYGDM+GGF +KD+ KT VF+LA WRN+H G T IP Sbjct: 412 VLTTGNKSEMATGYCTLYGDMAGGFAVIKDVLKTTVFRLARWRNAH---DPYGTGTAPIP 468 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYVEH 520 I+ + PSAELRP QTDQ+SLPPY +LD I++R +EN++S Y V V Sbjct: 469 ERIITRPPSAELRPDQTDQDSLPPYEVLDAIVERYMENDDSVEAIVAAGYARADVERVTR 528 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 LL +EYKRRQAPVG ++T + FG+D YPI+NKFR Sbjct: 529 LLRLNEYKRRQAPVGIRVTHRGFGKDWRYPITNKFR 564 >gi|148270642|ref|YP_001245102.1| NAD synthetase [Thermotoga petrophila RKU-1] gi|147736186|gb|ABQ47526.1| NH(3)-dependent NAD(+) synthetase [Thermotoga petrophila RKU-1] Length = 576 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 226/588 (38%), Positives = 341/588 (57%), Gaps = 42/588 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K+L++ +AQLNP +GD GN+ KA A A +G DL++F ELF+ GYPPEDL+ + S Sbjct: 1 MKRLRVTLAQLNPTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGYPPEDLMLRLS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ + T + G +++GF D++ N+ ++ G I+ V KI+LPNY Sbjct: 61 FLRENRKYLQKFAQHTRNLGVTVLMGFIDSDEDA-YNAAAVVKGGEILGVYRKISLPNYG 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK-KQGAEFLFSLNASPYY 180 F E+R F G + +I++G+ ICEDIW L +G + +L+ASPY+ Sbjct: 120 VFDERRYFKPGEELLVVKIGNIKVGVTICEDIWNPVEPSASLSLGEGVHLIANLSASPYH 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ + H+ + Y N VGGQDEL+FDG S D ++ K F E+ Sbjct: 180 VGKPVLRKDYLSMKAYDYHVAMAYCNMVGGQDELVFDGGSMVVDASGEVINYGKLFEEEI 239 Query: 241 FMTEWHYDQQLS------QWNYMSDDSASTMYI-------------------PLQEEEAD 275 + D+ L + YM + + P++EEE Sbjct: 240 ITVDLDLDENLRVSLVDPRRRYMKTQNYPVKTVEAGNLREKSGHFEPVVNPLPVREEEM- 298 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 + A + LRDYV+KN F KV+IGLSGG+DS+L A IA +ALGKENV+ +++P YTS +S Sbjct: 299 FRALITGLRDYVRKNGFEKVVIGLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKES 358 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 +EDA AK LG + ++PI D+ + + + I EN+Q+RIRGN LMALS Sbjct: 359 IEDAQTLAKNLGIETFIIPITDVFHSYLGALEDVFAGREPDITEENLQARIRGNYLMALS 418 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-HGITSGLG 454 N ++LTT NKSE++ GY TLYGDM+GGF +KD+YKT V+++ W NS G Sbjct: 419 NKFGWLVLTTGNKSEMATGYATLYGDMAGGFAVIKDVYKTDVYRIGRWYNSWRG------ 472 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYN 511 E+IP +I K P+AELRP QTDQE LPPY +LD+I++ +E + E + + ++ Sbjct: 473 --KEIIPENIFVKPPTAELRPGQTDQEKLPPYEVLDEILRLYIEEGLDPEEIAS--KGFD 528 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +TV V ++ +EYKR+QA +G KI+ ++FG+D PI+N+F++ + Sbjct: 529 RKTVLDVTEMIRKNEYKRKQAAIGVKISTRAFGKDWRMPITNRFKEPL 576 >gi|212710640|ref|ZP_03318768.1| hypothetical protein PROVALCAL_01706 [Providencia alcalifaciens DSM 30120] gi|212686721|gb|EEB46249.1| hypothetical protein PROVALCAL_01706 [Providencia alcalifaciens DSM 30120] Length = 540 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 227/560 (40%), Positives = 336/560 (60%), Gaps = 31/560 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL I++AQLN +VGDI GN + + EE + D+++F+EL ++GY PEDL+F+ Sbjct: 1 MSRKLNISLAQLNWLVGDIEGNCERMLQTVEEQGKN-TDIVMFSELALTGYSPEDLLFRH 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F + C++ + L+ + GI+VG P ++ + N++ G ++A K LPNY Sbjct: 60 DFEERCTAQLKRLQQASSQ--CGIIVGHPWYEENEIYNALSFFYQGKLLARYFKQELPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F + + F+ +LG+LICEDIW + I +K GA+ + ++NASPY Sbjct: 118 GVFDEPRYFTAAEKTCVVEFKGYQLGLLICEDIWYDEPI-DAVKGAGADLVLTINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R +++ LPI+Y+NQVGGQDEL+FDG S + + +QM F+EQ Sbjct: 177 LNKEHIRSDLLVEHAQRTGLPIVYLNQVGGQDELVFDGGSKVLANKGKQVYQMVEFAEQV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD----YNACVLSLRDYVQKNNFHKVI 296 + +D P Q E + Y A VL+ RDY+ KN F+ I Sbjct: 237 ATVTF-------------EDVKLVTEQPKQPEASQIAQVYQALVLATRDYINKNGFNGAI 283 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDS L AIA DA+GK+ VQ +M+P++YTS S+ DA A+ LG ++D++ I Sbjct: 284 LGLSGGIDSGLTVAIAADAIGKDRVQAVMMPFRYTSEMSIHDAKEQAELLGVEFDIVSIE 343 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + F + + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY Sbjct: 344 PMFDAFMAQLQPMFEGTQPDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYS 403 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF+ LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Sbjct: 404 TLYGDMAGGFDVLKDVPKTLVFELAKYRNT---------ISPAIPQRVIDRPPSAELAPG 454 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q DQ+SLPPY +LD I+ VE + S + + ++ E VR V L+ +EYKRRQAPVG Sbjct: 455 QLDQDSLPPYDVLDAILDGYVEKDLSVADLIKLGFDREIVRKVVRLVDINEYKRRQAPVG 514 Query: 536 TKITAKSFGRDRLYPISNKF 555 +IT ++FG+DR YPI++ F Sbjct: 515 PRITMRNFGKDRRYPITSGF 534 >gi|15644009|ref|NP_229058.1| NAD synthetase [Thermotoga maritima MSB8] gi|8928238|sp|Q9X0Y0|NADE2_THEMA RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|4981808|gb|AAD36328.1|AE001780_12 NH(3)-dependent NAD(+) synthetase [Thermotoga maritima MSB8] Length = 576 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/589 (39%), Positives = 345/589 (58%), Gaps = 44/589 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K+L++ +AQLNP +GD GN+ KA A A +G DL++F ELF+ GYPPEDL+ + S Sbjct: 1 MKRLRVTLAQLNPTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGYPPEDLMLRLS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ + T + G +++GF D++ N+ ++ G I+ V KI+LPNY Sbjct: 61 FLRENRKYLQKFAQHTRNLGVTVLMGFIDSDEDA-YNAAAVVKDGEILGVYRKISLPNYG 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK-KQGAEFLFSLNASPYY 180 F E+R F G + +I++G+ ICEDIW L +G + +L+ASPY+ Sbjct: 120 VFDERRYFKPGEELLVVKIGNIKVGVTICEDIWNPVEPSASLSLGEGVHLIANLSASPYH 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ + H+ + Y N VGGQDEL+FDG S D ++ K F E+ Sbjct: 180 VGKPVLRKDYLSMKAYDYHVAMAYCNMVGGQDELVFDGGSMVVDASGEVINYGKLFEEEI 239 Query: 241 FMTEWHYDQQLS------QWNYMSDDSASTMYI-------------------PLQEEEAD 275 + D+ L + YM + + P++EEE Sbjct: 240 ITVDLDLDENLRVSLVDPRRRYMKTQNYPVKTVEAGNLREKSGHFEPVVNPLPVREEEM- 298 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 + A + LRDYV+KN F KV+IGLSGG+DS+L A IA +ALGKENV+ +++P YTS +S Sbjct: 299 FRALITGLRDYVRKNGFEKVVIGLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKES 358 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFF-SLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +EDA AK LG + ++PI D+ + + +L F EP I EN+Q+RIRGN LMAL Sbjct: 359 IEDAQTLAKNLGIETFIIPITDVFHSYLETLKGVFAGREPD-ITEENLQARIRGNYLMAL 417 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-HGITSGL 453 SN ++LTT NKSE++ GY TLYGDM+GGF +KD+YKT V+++ W NS G Sbjct: 418 SNKFGWLVLTTGNKSEMATGYATLYGDMAGGFAVIKDVYKTDVYRIGRWYNSWRG----- 472 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEY 510 E+IP +I K P+AELRP QTDQE LPPY +LD+I++ +E + E + + + Sbjct: 473 ---KEIIPENIFVKPPTAELRPGQTDQEKLPPYEVLDEILRLYIEEGLDPEEIAS--KGF 527 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + +TV V ++ +EYKR+QA +G KI+ ++FG+D PI+N+F++ + Sbjct: 528 DRKTVLDVTEMIRKNEYKRKQAAIGVKISTRAFGKDWRMPITNRFKEPL 576 >gi|329902389|ref|ZP_08273093.1| NAD synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327548804|gb|EGF33438.1| NAD synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 537 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/558 (42%), Positives = 331/558 (59%), Gaps = 30/558 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQ+N VGD++GN AK E A QG D+++ E+ + GYPPEDL+ + +F Sbjct: 3 VKVAIAQINSTVGDLSGNRAKIFAFAERAAGQGADIVVTPEMSLVGYPPEDLLLRDAFYA 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + L +D G ++VG P N+VV+L G+I+A K LPN + F Sbjct: 63 QSAEQVAGLAADLAVFAGLHVLVGLPLLKDGARFNAVVVLADGHIVATYCKSELPNDAVF 122 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F SG + + + GI ICED W + A+ L N SPY+ NK Sbjct: 123 DEKRYFSSGDQACVLTIKGVTFGINICEDTWFDRAPALARAAG-AQVLLVPNGSPYHMNK 181 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 L R++I+ + L ++YVN VGGQDELIFDG SF D QL Q+ H E Sbjct: 182 LHLRYDIMRANVCAQGLSLVYVNLVGGQDELIFDGNSFVMDQSGQLQAQLSHVDE----- 236 Query: 244 EWHYDQQLSQWNYMSDDSASTM---YIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 D QL ++ D A+ + + P EA Y A VL +RDY+ KN F V++GL Sbjct: 237 ----DLQLVEF-----DGATPLPGKFAPRLSVEAQVYQALVLGVRDYIGKNGFPGVLLGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGG+DSAL A+AVDALG + V+T+M+P YT+ S D+ A+ G +YD + I + Sbjct: 288 SGGVDSALTLAVAVDALGADKVRTVMMPSPYTAEISWIDSRDMAQRTGVRYDEIAIGNCF 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + F +++ P ENIQ+RIRG ILMALSN +++LTT NKSE++VGY TLY Sbjct: 348 DAFLGTLAEDFAGLPLDATEENIQARIRGTILMALSNKHGSIVLTTGNKSEMAVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF LKD+ KT V++L ++RN+ ++ VIP IL ++PSAELRP QTD Sbjct: 408 GDMAGGFAVLKDIAKTLVYRLCAYRNA---------ISPVIPERILTRAPSAELRPDQTD 458 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY ILD I++ +E S + + E VR + HL+ +EYKRRQ+PVG ++ Sbjct: 459 QDSLPPYEILDGIMQLFMEENRSVDDVIAAGFQAEDVRRITHLIKINEYKRRQSPVGIRV 518 Query: 539 TAKSFGRDRLYPISNKFR 556 T ++FGRD YPI++KFR Sbjct: 519 THRAFGRDWRYPITSKFR 536 >gi|297183634|gb|ADI19760.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04] Length = 538 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 228/555 (41%), Positives = 331/555 (59%), Gaps = 23/555 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+N +VGDI GN + + + G+D+++F EL ++GYPPEDL+ ++ Sbjct: 1 MKIVMAQINTLVGDIKGNTQRILDVCVDQSALGVDMVVFPELTLTGYPPEDLLLRQHTTD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++A++ L D DG A +VVG+PR+ + NS +L G ++A DK LPNY F Sbjct: 61 LTAAALERLCQDLPDGLA-VVVGYPRRQGGLLFNSAGVLYNGAVVAEYDKQCLPNYQVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F +G + +D+ +G+ ICEDIW + + GA+ L +LNASP++ K Sbjct: 120 EKRYFEAGADTCVVTIKDLPIGLTICEDIW-HPQPAANAAAAGAQLLINLNASPFHRGKQ 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +R V+ LPI+YVNQVGGQDEL+FDG SF D + + + F+E E Sbjct: 179 SERTAQVSALARTHQLPILYVNQVGGQDELVFDGGSFVVDARGDVQHRAIEFAEVMLSVE 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 QL ++ + PL E +A + VL +RDYV KN F V++GLSGGID Sbjct: 239 IETSPQLKV-------ASGALATPLDELDAVWQVLVLGMRDYVNKNGFPGVVLGLSGGID 291 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+ A+AVDALG E V+ +M+P++YT+ S+EDAA A G + I L F + Sbjct: 292 SAVTLAVAVDALGPERVEAVMMPFRYTASMSIEDAAEQANTQGVAFSNRSIEPLYEAFMT 351 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + I EN+Q+R RG +LM++SN ++LTT NKSE++VGY TLYGDM+G Sbjct: 352 TLAPAFEGLEPNITEENLQARCRGVLLMSISNKKNLLVLTTGNKSELAVGYSTLYGDMAG 411 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF+ LKD K V+ LA +RN+ G + IP ++ + PSAEL P Q D++SLP Sbjct: 412 GFDVLKDCPKMLVYALAQYRNTLG---------QCIPERVISRPPSAELAPDQKDEDSLP 462 Query: 485 PYPILDDIIKRIVENEESFINNDQ---EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 PY +LD II+ VE + S +D ++ E V V L+ +EYKRRQAPVG +I+ + Sbjct: 463 PYEVLDQIIEHYVERDAS--RDDMIAAGFSPEDVHRVVRLIDLNEYKRRQAPVGVRISPR 520 Query: 542 SFGRDRLYPISNKFR 556 +FGRDR YPI+ +R Sbjct: 521 AFGRDRRYPITWAWR 535 >gi|253996052|ref|YP_003048116.1| NAD+ synthetase [Methylotenera mobilis JLW8] gi|253982731|gb|ACT47589.1| NAD+ synthetase [Methylotenera mobilis JLW8] Length = 539 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 229/557 (41%), Positives = 330/557 (59%), Gaps = 27/557 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+N +VGD+AGN K A QG L++ EL + GY PEDL+ + F++ Sbjct: 1 MKIAIAQINCIVGDLAGNAKKIVAYAASAKEQGATLVVTPELSLCGYSPEDLLLRPDFLR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC + TL D ++VG P Q+ E N+ +L+ G+I+A K LPNY F Sbjct: 61 ACEDTLQTLAQQLSD--ITVIVGHPHQEGEQCFNAASVLEGGSIVATYHKQVLPNYGVFD 118 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 EKR F SG + +VF +++G+LIC D+W+ K GAE L ++N SPY+ Sbjct: 119 EKRYFSSG--AEALVFNHCGVKVGVLICADVWEPKPALLA-KMAGAELLIAMNGSPYHMK 175 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R E++ + +LP++YVN VGGQDEL+FDGASF + Q ++ ++ F Q + Sbjct: 176 KQSARFEVLKQRAVENNLPVVYVNMVGGQDELVFDGASFVLNAQGEVVAELDAFESQLEV 235 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E+ + Q + + L E Y A L L DY+ KN F V+IGLSGG Sbjct: 236 IEFDHAQPIY----------GEITPSLSLEATVYKALKLGLADYINKNGFPGVVIGLSGG 285 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +DSAL A+AVDA+G + V +M+P ++T+ S+ DA A +G KY+ + I L + + Sbjct: 286 VDSALTLALAVDAIGADKVHAVMMPSEFTADISVNDAREMADIVGVKYEEIAIKPLFDSY 345 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S +S + P EN+Q+RIRG +LMA+SN ++++TT NKSE++VGY TLYGDM Sbjct: 346 LSALSPQFGDMPFDATEENLQARIRGMLLMAISNKFGSIVVTTGNKSEMAVGYCTLYGDM 405 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF LKD+ KT V++L ++RN L+ VIP I+ + PSAELR +Q DQ+S Sbjct: 406 AGGFALLKDVPKTLVYRLCAYRNQ---------LSRVIPERIITRPPSAELRANQVDQDS 456 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD II+ VEN+ S Y + V ++ +EYKRRQ+PVG +IT K Sbjct: 457 LPPYDVLDAIIEAYVENDLSRAEIVALGYPISDINRVIAMIDRNEYKRRQSPVGVRITDK 516 Query: 542 SFGRDRLYPISNKFRDH 558 FG+DR YPI+ K ++ Sbjct: 517 GFGKDRRYPITAKLSEY 533 >gi|145297764|ref|YP_001140605.1| NAD synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850536|gb|ABO88857.1| NH(3)-dependent NAD+ synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 540 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 230/556 (41%), Positives = 337/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L + +AQLN VG I N K A +A +QG DL++ +EL ++GYPPEDL+ + Sbjct: 1 MAKALSLMLAQLNLTVGAIEDNCDKVLAAAVQAEQQGADLLVCSELALTGYPPEDLLLRS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + +A+ + T G I+VG P ++ + N+ + + G ++A K +LPNY Sbjct: 61 DLMIRVDAALARIA--TWQGRCAILVGHPWREGAALYNAASLYEQGKLVARYFKQDLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + FR +LG+LICED+W+ + K GAE L ++NASPY Sbjct: 119 GVFDEKRYFTAGTDTCVVPFRGHKLGLLICEDLWQPGPVLAA-KAAGAELLLTINASPYD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R E++T + S LP++Y+NQV GQDELIFDG S F+ Q +L ++ F+E+ Sbjct: 178 QEKPWIRRELMTERCSQTGLPLVYLNQVCGQDELIFDGCSKVFNSQGELTHKLAPFAEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + Q + + + PL+ Y A VL++ DY+ KN F ++GLS Sbjct: 238 ALVHFADGQPVKEREPAA---------PLEPLAETYQALVLAVHDYITKNGFQGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G + VQ +M+P++YT+ S+EDA A+ +G ++D++ I + Sbjct: 289 GGIDSALTLAIAADAIGADKVQAVMMPFRYTAQMSVEDAKEQAERMGVEFDIISIEPMFE 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 GFMTQLAPLFAGTARDTTEENLQARCRGVLLMALSNKRRRIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L +RNS + VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLCEYRNS---------VDYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I+KR VE + S + E + + VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILKRYVEEDASVADMVAEGFEEVVVRKVIRLVDLNEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|313200694|ref|YP_004039352.1| nad+ synthetase [Methylovorus sp. MP688] gi|312440010|gb|ADQ84116.1| NAD+ synthetase [Methylovorus sp. MP688] Length = 540 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/556 (41%), Positives = 331/556 (59%), Gaps = 25/556 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++AIAQ+N VVGD+AGN A+ EA G L+L EL +SGY P+DL+ ++ F Sbjct: 1 MQVAIAQINCVVGDLAGNAARILSYAHEAKAAGASLMLTPELALSGYSPQDLLLREDFTH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + L + +VVG P ++ N+ +L G I+ K LPN+S F Sbjct: 61 HCQRELQAL-AKALPADITVVVGHPHREHGRCYNAASVLQGGRIVLTYHKHALPNHSVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G + +R GILIC D+W+ K K+ GAE L LNASP++ K Sbjct: 120 EVRYFSPGNKAGVFEHQGVRCGILICADVWE-PGPAKVSKQAGAELLLVLNASPFHLEKQ 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R++++ ++ LP++Y N VGGQDEL+FDG S D Q+ F+EQ + Sbjct: 179 QQRYKVLGKRVEETGLPLVYANLVGGQDELVFDGNSVVIDRCGAPVQQLPAFTEQLALVS 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q ++ N + + A L EE+ Y A L LRDYVQKN F ++GLSGGID Sbjct: 239 IDLSPQ-NRANPLPAEIAPG----LTREESAYQALTLCLRDYVQKNGFPGAVLGLSGGID 293 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG + V +M+P ++T+ S++DA A+ LG KY LPI L + F + Sbjct: 294 SALTLAIAVDALGADKVHAVMMPSEFTADMSVDDARQMAQLLGVKYTELPIKPLFDQFCA 353 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +++ + EN+Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM+G Sbjct: 354 TLAEPFTGTSFDLTEENLQARIRGMLLMALSNKFGSIVLTTGNKSEMAVGYSTLYGDMAG 413 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V++LA +RNS L++VIP I+ + PSAELR QTDQ+SLP Sbjct: 414 GFAVLKDISKTLVYRLARYRNS---------LSQVIPERIIIRPPSAELRHGQTDQDSLP 464 Query: 485 PYPILDDIIKRIVENEESFINNDQE-----YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 PY +LD I++ VE + S QE Y ++ V V +L+ +EYKRRQ+P+G ++T Sbjct: 465 PYDVLDAIMEAYVERDSS----RQEIIAMGYREQDVARVLNLIDRNEYKRRQSPIGVRVT 520 Query: 540 AKSFGRDRLYPISNKF 555 + FG DR YP+ ++F Sbjct: 521 ERGFGLDRRYPVVSRF 536 >gi|237745825|ref|ZP_04576305.1| NAD+ synthase [Oxalobacter formigenes HOxBLS] gi|229377176|gb|EEO27267.1| NAD+ synthase [Oxalobacter formigenes HOxBLS] Length = 537 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/558 (42%), Positives = 333/558 (59%), Gaps = 30/558 (5%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K+AIAQ+N VGD++GN A+ + EA +G D++L EL ++GYPPEDL+ + SF A Sbjct: 4 KVAIAQINSTVGDLSGNRARIAQFAREAAAKGADIVLTPELSLTGYPPEDLLLQHSFHSA 63 Query: 66 CSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D LK++ D ++VG N+ IL G+II K LPNY+ F Sbjct: 64 TRLELDRLKNELADLDNVHVLVGHHCIRDGLCYNACSILANGSIIGTYFKQELPNYTVFD 123 Query: 125 EKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 EKR F G +P+VF + + G+ ICEDIW + + GA+ L +N+SPY+ Sbjct: 124 EKRYFTPG--TEPLVFHVKGVSFGVTICEDIWF-PEPAERTRAAGADVLLIMNSSPYHMG 180 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K+ +R IV + H L +YVN VGGQDELIFDG SF + ++ Q+K E Sbjct: 181 KMHQRPVIVRQNVIHHGLAALYVNLVGGQDELIFDGCSFAMNRDGKVCVQLKQCEE---- 236 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D ++ + + + P E+E Y A VL +RDYV KN F VIIGLSGG Sbjct: 237 -----DMEIVSFENGNPVNGRMEEHPTVEKEV-YRALVLGVRDYVNKNGFPGVIIGLSGG 290 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +DSAL AIAVDALG E V+TIM+P YTS S DA+ A + YD +PI D + F Sbjct: 291 VDSALVLAIAVDALGPEKVRTIMMPSPYTSEISRIDASDMAARMKVSYDEIPITDCFSSF 350 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ P EN+Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM Sbjct: 351 LQTLAPQFANLPEDSTEENLQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDM 410 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF +KD+YKT V++L +RN+ +++VIP +L ++P+AEL+P+Q DQ++ Sbjct: 411 AGGFAVIKDIYKTLVYRLCRYRNT---------ISDVIPERMLTRAPTAELKPNQFDQDT 461 Query: 483 LPPYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 LPPY +LD I+K +E +S + N Y+ V + L+ +EYKRRQAP+G +IT Sbjct: 462 LPPYEVLDAIVKMFMEENKSVNEIVRNG--YSHIVVERIVRLMRINEYKRRQAPIGIRIT 519 Query: 540 AKSFGRDRLYPISNKFRD 557 + FGRD PI++KFRD Sbjct: 520 PRGFGRDWRCPITSKFRD 537 >gi|117926867|ref|YP_867484.1| NAD+ synthetase [Magnetococcus sp. MC-1] gi|117610623|gb|ABK46078.1| NAD+ synthetase [Magnetococcus sp. MC-1] Length = 577 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 242/582 (41%), Positives = 331/582 (56%), Gaps = 37/582 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + +AIAQ+N VG + N A + A R G L+LF EL ++GYPPEDL+ K SF+ Sbjct: 2 EFTLAIAQINAHVGALEKNRLAMVSAAKHARRMGAKLVLFPELALTGYPPEDLLHKPSFL 61 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSE 122 + L+ + G + G PR++ G L N+ +++ G + K LPNY Sbjct: 62 RRVEQEELELRDALREIGVDAIYGVPRRNAAGTLWNAAALIEQGIESQLCIKQALPNYGV 121 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E+R F G +++I +GI ICEDIW+ L +QGA+ + +LNASPY Sbjct: 122 FDERRYFEPGGETHSFNYQEIPMGINICEDIWQAKGAAAQLARQGAKLIINLNASPYRVG 181 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K + R EI+ ++ LP+IYVN VGGQDEL+FDG SF D +L + + FSE+ + Sbjct: 182 KWQDREEIIRARVQETGLPVIYVNLVGGQDELVFDGGSFAMDHTGKLVERCRFFSEELRL 241 Query: 243 TEWHYD-QQLSQWNYMS--DDSASTMYIPLQE----------EEAD---------YNACV 280 +D Q W + D+ + P++ E+ + Y A Sbjct: 242 MRVKWDGQNPVVWVPVHGIDNGPVRLVAPMEGGDWRAPRAHGEDVEPPMEPLHEIYTAMK 301 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 + L DYV+KN F V++GLSGG+DSAL AA+AVDALG + V+++M+P +TS +SL DA Sbjct: 302 IGLHDYVRKNGFQGVVLGLSGGVDSALTAAVAVDALGADKVESVMMPSAFTSGESLSDAE 361 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE----PSGIVAENIQSRIRGNILMALSN 396 CA LG K L I L F L Q L EE P + EN+Q RIRG +LMALSN Sbjct: 362 LCAANLGIKLGNLTIGPL----FELFKQTLAEEFAGLPEDVTEENLQPRIRGTLLMALSN 417 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +LLTT NKSE+SVGY TLYGDM+GG++ LKDL KT VF+L WRN G PL Sbjct: 418 KKGTLLLTTGNKSEMSVGYATLYGDMAGGYSVLKDLLKTTVFELCEWRNEQARKEG-KPL 476 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDET 514 IP +I++K P+AELR Q D +SLPPY ILD I+ VE EE I E Sbjct: 477 P--IPQNIIDKPPTAELRHDQKDTDSLPPYDILDTILHHYVELEEGLDEIVAAGIERAEA 534 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 VR + ++ +EYKRRQAP G +I ++FG+ R YP++N F+ Sbjct: 535 VRVIA-MVDRNEYKRRQAPPGVRIVDRNFGKARRYPLTNGFK 575 >gi|187478133|ref|YP_786157.1| NAD synthetase [Bordetella avium 197N] gi|115422719|emb|CAJ49246.1| glutamine-dependent NAD synthetase [Bordetella avium 197N] Length = 542 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/563 (41%), Positives = 334/563 (59%), Gaps = 26/563 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++ IAQ+N VGD+AGN A+ +A EA +G D++L EL ++GYPPEDL+ + Sbjct: 1 MSVVRVGIAQINACVGDLAGNAARVLKAAREAYGRGADILLTPELVLTGYPPEDLLLRPL 60 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 FI+ + + L +D G ++VG + + + N+ +L G ++ K LPNY Sbjct: 61 FIERQQAVLAQLAADLAGLPGLHVLVGHVERREGHLYNAASVLCEGRVLGSYRKRELPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 S F E+R F+S P+VF + +R+G+ ICEDIW + A+ L NASP Sbjct: 121 SVFDEQRYFLS--DTQPLVFEVKGVRVGVNICEDIWFDRAPQAAADAG-AQVLLVPNASP 177 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K +R + ++ ++Y N VGGQDEL+FDGASF D + +L+ ++ F+E Sbjct: 178 YNLGKPTERLTVARRVVAATGCSLVYANLVGGQDELVFDGASFALDREGRLSARLPDFAE 237 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKVII 297 L + AS + P L EEE +NA VL RDY+ KN F II Sbjct: 238 ---------GLSLVDVDARGAVGASAVVAPSLSEEEQVWNALVLGTRDYLGKNRFPGAII 288 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSA+ AIAVDA+G +NV+ +M+P +YT+ SL DA A+ LG +YD + I Sbjct: 289 GLSGGIDSAVVLAIAVDAVGADNVRAVMMPSRYTADISLTDARDMAQRLGVRYDEIVIGP 348 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 +V+ F + ++ P ENIQ+R RG +LMALSN + ++LTT NKSE+S GY T Sbjct: 349 IVDAFETALAPQFAGLPVDATEENIQARARGTLLMALSNKTGQLVLTTGNKSEMSTGYCT 408 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF +KD+ KT V++LA WRN+ +++IP I+ + PSAELRP Q Sbjct: 409 LYGDMAGGFAVIKDVPKTLVYRLAVWRNTK---------SDIIPERIITRPPSAELRPDQ 459 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLP Y +LD I+ R +E S + E Y V V L+ +EYKRRQAP G Sbjct: 460 TDQDSLPSYDVLDGIVLRHMEQNASAADLLAEGYPPAAVEQVLRLIRINEYKRRQAPPGP 519 Query: 537 KITAKSFGRDRLYPISNKFRDHI 559 ++TA++FGRD YP++N FRD + Sbjct: 520 RVTARAFGRDWRYPVTNGFRDAV 542 >gi|254517171|ref|ZP_05129229.1| NAD+ synthetase [gamma proteobacterium NOR5-3] gi|219674676|gb|EED31044.1| NAD+ synthetase [gamma proteobacterium NOR5-3] Length = 540 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 237/559 (42%), Positives = 337/559 (60%), Gaps = 29/559 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 + I +AQ+N VGD GN + A E+A Q +++F EL +SGYPPEDL+ + + Sbjct: 1 MHILMAQINTTVGDFTGNTDQVIVAAEQACAQHDSPIVVFPELTLSGYPPEDLLLRPALC 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + S A++ L SD G A ++VG+P + + + N ++ G ++A K LPNY F Sbjct: 61 KRVSDALERLCSDLP-GSAWVIVGYPIRREGALYNCAGVIHQGELVAEYRKCELPNYQVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F +G + +R+G+ ICEDIW GA+ L +LNASPY+ K Sbjct: 120 DEKRYFTAGSQPCVLDIEGVRVGLSICEDIWVPGPT-AATAAAGAQLLINLNASPYHRGK 178 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++R E+V+ + L ++YVNQVGGQDEL+FDG SF + + +A Q F QN T Sbjct: 179 QQQRLELVSQRCKDNKLAVVYVNQVGGQDELVFDGGSFAMNPEGSVAVQAPRF--QNATT 236 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 Y + + S++ PL E A + A VL +RDYV KN F V++GLSGG+ Sbjct: 237 WCEYSGEAGAGALRT----SSIEPPLDELAAIWQALVLGMRDYVNKNGFPGVVLGLSGGV 292 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A+AVDALG E VQ +M+P++YTS S+ DAA + LG ++ V+ I + F Sbjct: 293 DSALTLAVAVDALGPERVQAVMMPFRYTSDISIADAAQQSATLGVRHSVISIEPIYESFL 352 Query: 364 S-LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + L +F EP EN+Q+R RG +LM+LSN ++++LTT NKSE++VGY TLYGDM Sbjct: 353 AALQDEFAGLEPD-TTEENLQARCRGVLLMSLSNKKRSLVLTTGNKSELAVGYSTLYGDM 411 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF+ LKD+ KT V+ L +RNS LGP IP ++E+ PSAEL P Q D++S Sbjct: 412 AGGFDVLKDVPKTLVYALCHYRNS------LGP---CIPERVIERPPSAELAPDQKDEDS 462 Query: 483 LPPYPILDDIIKRIVENE---ESFINN--DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 LPPY +LD I++ VE + E+ I D+ + VR V+ +EYKRRQAPVG + Sbjct: 463 LPPYEVLDRILELYVERDYSAEAIIAEGIDRADVERAVRLVDI----NEYKRRQAPVGVR 518 Query: 538 ITAKSFGRDRLYPISNKFR 556 IT + FGRDR YPI++ +R Sbjct: 519 ITQRGFGRDRRYPITSAWR 537 >gi|225849058|ref|YP_002729222.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Sulfurihydrogenibium azorense Az-Fu1] gi|225644679|gb|ACN99729.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Sulfurihydrogenibium azorense Az-Fu1] Length = 574 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 236/587 (40%), Positives = 339/587 (57%), Gaps = 45/587 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+++A+ Q+NP+VGD N+ K ++A +D+I F EL ++GYPPEDL+ K S Sbjct: 1 MRKIRVALGQINPIVGDFDYNLQKILDYIKKAKDLQVDIIAFPELALTGYPPEDLILKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ I L + D ++VGF + +E + N+ I+ NIIA K LPNY Sbjct: 61 FIEKNLQYIKKLTENVED--IVVIVGFIDK-KEDIYNAAAIIHNKNIIATYHKQFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F G + G+ ICEDIW N +G E +F++NASPY Sbjct: 118 VFDENRYFQKGNGLTVFEIEGYKFGVSICEDIWYPENPINTYAVEGCEVIFNINASPYSE 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+KKR E++ + + I YVN VGGQDEL+FDG SF + ++ + + F E Sbjct: 178 GKVKKREELLKVRSRDNLVSIAYVNLVGGQDELVFDGNSFFVNPNGEILGKGESFKEDLV 237 Query: 242 MTEWHYDQ----QLS-------QWNYMSDDSASTMYIPLQEEEAD--------------- 275 + + D+ QL + Y D + + + Q +E Sbjct: 238 VADIDLDEIFRYQLKDNRLKNLRSEYRRSDKVNYIKVDYQIKEKTVNIEQKIVLDKPDIE 297 Query: 276 --YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 YN VL LRDY+ KN F KV+IGLSGG+DS+L A IAVDALG ENV+ +++P YTS Sbjct: 298 NTYNTLVLGLRDYITKNGFKKVVIGLSGGVDSSLVATIAVDALGNENVKGVLMPSPYTSK 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +S+EDA AK L + ++PI ++ + + + EN+Q+RIRGNILMA Sbjct: 358 ESIEDALELAKNLNIETFIIPITNIFQTYLDEFKEIFKGLKPDTTEENLQARIRGNILMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN ++L T NKSE+SVGY TLYGDM GGF +KD+ KT+V+QL +RNS Sbjct: 418 LSNKFGWIVLATGNKSEMSVGYSTLYGDMVGGFAVIKDVLKTKVYQLCEYRNS------- 470 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEY 510 +++VIP +L K PSAELRP+QTD+ L PY ILD+IIK VE + E I + Sbjct: 471 --ISKVIPDRVLIKPPSAELRPNQTDEAELAPYHILDEIIKMYVEQDCSVEEIIK--AGF 526 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +++TV+ + L+ +EYKRRQ+P+G KIT ++FG+DR PI+N+F++ Sbjct: 527 DEKTVKKIVKLIDTNEYKRRQSPIGIKITERAFGKDRRMPITNRFKE 573 >gi|329895227|ref|ZP_08270891.1| Glutamine amidotransferase chain of NAD synthetase [gamma proteobacterium IMCC3088] gi|328922465|gb|EGG29807.1| Glutamine amidotransferase chain of NAD synthetase [gamma proteobacterium IMCC3088] Length = 546 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 228/561 (40%), Positives = 328/561 (58%), Gaps = 17/561 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M + +++ +AQ N VGD GN+A + E A + +I+F EL ++GYPPEDL+ + Sbjct: 1 MTEAMQLVLAQCNTHVGDFEGNLALCKSIVERAQSEFSRPVIVFPELTLTGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S A+ L A ++VG+PR+ + N+ ++ G +I K LPN Sbjct: 61 PSIEPRVQVALSQLCDVVTT--AYVIVGYPRRIDGVLYNAAGVIHQGALIGEYHKWCLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F EKR F G + +++G+ ICEDIW K GAE + +LNASP+ Sbjct: 119 YQVFDEKRYFEPGTEPCVVAIHGVQVGLSICEDIWAPEPALAA-KTAGAELILNLNASPF 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K +R IV +++ +P++YVNQVGGQDEL+FDG SF + Q Q+ Q+ F + Sbjct: 178 HRCKQNERLSIVAERVAETGIPVVYVNQVGGQDELVFDGGSFVMNSQGQVIKQLPRFDDA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 M + + ++D A LQE + A V+ +RDYV KN F V++GL Sbjct: 238 CEMVTYPFGPADVSEQAVTDQLAGFALTDLQEV---WQALVVGVRDYVNKNGFPGVVLGL 294 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGG+DSAL A+A ALG + VQ +M+P+KYTS SLEDAA A +G Y V+PI + Sbjct: 295 SGGVDSALTLAVAEAALGADRVQAVMMPFKYTSQMSLEDAAEQANRMGVNYSVIPIEPIY 354 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F S + + + EN+Q+R RG +LM++SN + ++LTT NKSEI+VGY TLY Sbjct: 355 NAFMSALEEEFEGRKPDTTEENLQARARGVVLMSISNKTGKLVLTTGNKSEIAVGYSTLY 414 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF+ LKD+ KT VF L +RNS LGP IP ++ + PSAEL P Q D Sbjct: 415 GDMAGGFDVLKDVPKTLVFALCWYRNS------LGP---CIPERVITRPPSAELAPDQKD 465 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLPPY +LD II VE + S N D+ + + V L+ +EYKRRQAP+G ++ Sbjct: 466 EDSLPPYEVLDQIIDLYVEQDCSAQNIIDKGFAEADVHRAVRLIDLNEYKRRQAPIGVRL 525 Query: 539 TAKSFGRDRLYPISNKFRDHI 559 T + FGRDR YPI++K++ + Sbjct: 526 TRRGFGRDRRYPITSKWKPGV 546 >gi|82703650|ref|YP_413216.1| NAD+ synthetase [Nitrosospira multiformis ATCC 25196] gi|82411715|gb|ABB75824.1| NAD+ synthetase [Nitrosospira multiformis ATCC 25196] Length = 538 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 233/562 (41%), Positives = 326/562 (58%), Gaps = 33/562 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQ+N VGD+ GN K +A G L++ EL +SGYPPEDL+ + F Sbjct: 1 MKLAIAQINCTVGDLGGNTRKILDYANQAKNAGARLVVTPELALSGYPPEDLLLRHGFRH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A+ L T D +VVG P + + N+ ++ G IIA K LPN S F Sbjct: 61 ACQNALTELAGKTGD--ITVVVGHPHLAADKLYNAASVIRNGKIIATYLKNLLPNDSVFD 118 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E+R F G+ P VF IR I IC+DIW+ + + K+ GAE L LNASPY+ N Sbjct: 119 ERRYFEPGFR--PCVFELDGIRFAINICQDIWQEGSATRA-KEGGAEVLLVLNASPYHMN 175 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R+++ +I L I+Y N +GGQDELIFDGASF + + + Q E M Sbjct: 176 KQALRYDLARKRIDETGLSIVYANLIGGQDELIFDGASFAMNARGDVTHQFDALVEALGM 235 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSG 301 E +T PL+ EA+ Y A L ++DY+ KN V++GLSG Sbjct: 236 VELE-----------GAAPVTTEIAPLESLEANVYKALCLGVKDYIGKNRIPGVLLGLSG 284 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 G+DSAL IA DALG + V+ +M+P ++T+ SL DA A+ LG +Y PI + Sbjct: 285 GVDSALTMTIAADALGADKVKAVMMPSRFTADMSLLDARTMAQTLGVRYTEFPIEPVFGE 344 Query: 362 FF-SLMSQFLQEEPSGI---VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F +L +F PS + EN+Q+RIRG +LMALSN S A++L T NKSE +VGY T Sbjct: 345 FKDTLAKEFAALPPSDVPDLTEENLQARIRGTLLMALSNKSGAIVLITGNKSETAVGYST 404 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGD +GGF LKD+ KT V++L +RN G +VIP +L ++PSAELRP Q Sbjct: 405 LYGDTAGGFAVLKDVTKTMVYKLCQYRNGVG---------KVIPDRVLSRAPSAELRPDQ 455 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I++ VE++ S Y++ R V L+ +EYKRRQ+P G Sbjct: 456 TDQDSLPPYAVLDAILEEYVEHDMSLEEILRMGYDERDARRVVQLIRQNEYKRRQSPPGI 515 Query: 537 KITAKSFGRDRLYPISNKFRDH 558 ++T+++FG+D YPI+ +++D Sbjct: 516 RVTSRAFGKDWRYPITARYQDQ 537 >gi|88811118|ref|ZP_01126374.1| NAD(+) synthetase [Nitrococcus mobilis Nb-231] gi|88791657|gb|EAR22768.1| NAD(+) synthetase [Nitrococcus mobilis Nb-231] Length = 543 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 233/560 (41%), Positives = 326/560 (58%), Gaps = 26/560 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDL 56 M +L+IA+AQLN +VGD+ GN I A RAR+E + +++F EL ++GYPP+DL Sbjct: 1 MNDRLRIAMAQLNLLVGDVRGNTLAVIDAACRARDELRAR---VVIFPELALTGYPPDDL 57 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 + + F+ S+AI L D ++VG P + G++N+ ++++ G I A K Sbjct: 58 LLRNDFLGEVSAAIAQLCRAVRD--VTLIVGAPVRSATGLMNAALVIEQGRIAATYAKHY 115 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LP Y F + R F G + + R+G+ ICED W + ++ GAE + +LNA Sbjct: 116 LPTYGVFDDTRYFEPGSAPCVVEVAGCRIGVTICEDAWHPEPVAWAVQ-MGAEVVVNLNA 174 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SP+ K R ++ +I + ++Y N GGQDE+++DGAS F L + F Sbjct: 175 SPFDQYKRAAREAVIRERIGESGVAMLYCNMAGGQDEVVYDGASCAFGRHGDLRVRAPRF 234 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 + + Q+ W + S P EE Y+A V +RDYV+KN F VI Sbjct: 235 --RPGLVPVDLLQRGGGWEALE---GSIEEDP-SEEAVLYDALVWGVRDYVEKNGFPGVI 288 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 IGLSGGIDSAL +AVDALG E V+T+M+P +YTS S DAAA A +L ++ V+ I Sbjct: 289 IGLSGGIDSALVTCVAVDALGAERVETVMMPTQYTSEISWTDAAALAGSLRIRHRVIAIE 348 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + F + + P+ + EN+QSRIRG +LMALSN ++L T NKSE++VGY Sbjct: 349 GVFKAFSETLQPVFADAPADVTEENLQSRIRGTLLMALSNKQGKLVLATGNKSELAVGYA 408 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM GGF PLKD++KT V+ LA +RN G EVIP SIL + PSAELRP+ Sbjct: 409 TLYGDMVGGFAPLKDIFKTDVYSLARYRNELG---------EVIPQSILTRPPSAELRPN 459 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D +SLP Y +LD I+ VE + S E Y+ TV V L++ +EYKRRQAP G Sbjct: 460 QLDTDSLPEYIVLDTILAAYVEEDRSVEEIVAEGYDRATVEEVVRLVHRNEYKRRQAPPG 519 Query: 536 TKITAKSFGRDRLYPISNKF 555 K+T K+FGRDR YPI++ F Sbjct: 520 VKVTTKAFGRDRRYPITSGF 539 >gi|90022198|ref|YP_528025.1| Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Saccharophagus degradans 2-40] gi|89951798|gb|ABD81813.1| NAD+ synthetase [Saccharophagus degradans 2-40] Length = 540 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 238/565 (42%), Positives = 338/565 (59%), Gaps = 38/565 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKA-RRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 + L IA+AQ+NP+VGDI GN A AN+ D+I+F EL ++GYPPEDL+ + Sbjct: 1 MSTLNIALAQINPLVGDIDGNTQLIIDEALALANKH--DVIVFPELTLTGYPPEDLLLRP 58 Query: 61 SFIQACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S AI L S+ A +VVG+P+++ + N +L G ++ K LPN Sbjct: 59 SIALRVDRAIQQILDSNIS---AAVVVGYPKREGGKLFNMAGVLAQGQVLFEYAKQCLPN 115 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y F EKR F +G + P VF+ + LG+ ICEDIW S + L+ + +LNAS Sbjct: 116 YQVFDEKRYFEAG--SKPGVFQLNGVNLGLSICEDIWDGSPL-DQLQSADVHAVLNLNAS 172 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 P++ K +R ++ + + PI+YVNQVGGQDEL+FDG S Q ++ + + F Sbjct: 173 PFHQEKQAEREALIAARAKKLGAPILYVNQVGGQDELVFDGGSMVATAQGEIVGRTELFK 232 Query: 238 EQNFMTEW-----HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 E Q S+ + +D A T Y A V+ +RDYV KN F Sbjct: 233 NACLSVELDTATKQVSPQASKSGHPADPLADT-----------YEALVVGVRDYVNKNRF 281 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 V++GLSGGIDSAL AIAVDALGKE V+ +M+P+KYTS SL+ A A+ LG KY V Sbjct: 282 KGVVLGLSGGIDSALTLAIAVDALGKERVEAVMMPFKYTSQLSLDGAEDEARRLGVKYRV 341 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + I + + F +++ + + ENIQ+R RG +LMALSN ++LTT NKSE++ Sbjct: 342 IHIEPMYDAFTQALNEAFEGQQKDTTEENIQARSRGVLLMALSNKLGYLVLTTGNKSEMA 401 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGDM+GG + LKD+ KTQVF L+ +RN+ G EVIPP+++++ PSAE Sbjct: 402 VGYATLYGDMAGGLDVLKDVPKTQVFALSRYRNTLG---------EVIPPAVIDRPPSAE 452 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 L P Q D++SLPPY ILD I++ +E +ES + + ++ E V V L+ +EYKRRQ Sbjct: 453 LAPDQKDEDSLPPYEILDQILELYIEQDESAESIVAKGFDKEQVYRVLRLVDLNEYKRRQ 512 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 APVG +I+ ++FGRDR YPI+N ++ Sbjct: 513 APVGIRISKRAFGRDRRYPITNGWK 537 >gi|217077779|ref|YP_002335497.1| NAD synthetase [Thermosipho africanus TCF52B] gi|217037634|gb|ACJ76156.1| glutamine-dependent NAD+ synthetase [Thermosipho africanus TCF52B] Length = 576 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 225/584 (38%), Positives = 341/584 (58%), Gaps = 42/584 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ +AQLN +GD GN+ K A E A + ++F ELF++GYPPEDL+ + SF++ Sbjct: 3 IRTTVAQLNSTLGDFEGNMKKIISAIEIAENNNSEFLIFPELFLTGYPPEDLILRTSFLK 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + + + I++GF + + NS+ ++ G ++ K++LPNYS F Sbjct: 63 KNIEYLEKIINFSRGKNVIILLGFIDIEDDA-YNSLAVIRDGKLLGKYHKMHLPNYSVFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F SG I + +I++GI ICEDIW + GA+ + + +ASPY+H K Sbjct: 122 ENRYFKSGNEIVIINYNNIKIGINICEDIWSPLGPMFYQAINGAQLILNASASPYFHGKR 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ----- 239 + R ++ + H PI+Y N VGGQDE++FDG S ++ F+ K F E+ Sbjct: 182 ELRKNYLSKKSYDHHCPIVYCNMVGGQDEVVFDGGSVVTSSDGKIIFEGKPFEEEIFTID 241 Query: 240 -----NFMTEWHYDQQLSQWNYMSDDSASTMYI------------------PLQEEEADY 276 N T H D + N ++D + +++ L +EE + Sbjct: 242 IPIEDNLRTNLH-DPRRRYINIVNDKPINYIFVKSENINKLKPINYKNKNYTLTKEEEIF 300 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A L L+DY+QKN F KV+IGLSGG+DS+L AAIAV+ALG +NV I++P Y+S S+ Sbjct: 301 RAITLGLKDYIQKNGFKKVLIGLSGGMDSSLVAAIAVEALGNKNVVGILMPSMYSSSHSI 360 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 EDA A+ L +Y ++ I D+ F + + + I EN+Q+RIRG +LMA+SN Sbjct: 361 EDAKKLAENLEIEYHIIKISDIYYSFKNSLKDIFKGTSEDITEENLQARIRGTLLMAVSN 420 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++L T NKSEI+ GY TLYGDM GGF+P+KD+YKT V+++A W N Sbjct: 421 KFGYIVLATGNKSEIATGYSTLYGDMVGGFSPIKDIYKTDVYKIARWYNKF-------KG 473 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDE 513 E+IP ++ K PSAELRP Q DQ++LPPY ILD+I+K +E E + IN + ++ + Sbjct: 474 KEIIPENVFIKPPSAELRPDQKDQDTLPPYEILDEILKMYIEKELSVDEIIN--KGFDKD 531 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 TV+YV L+ +EYKRRQ +G K++ +SFG+DR PI+NK+R+ Sbjct: 532 TVKYVAKLVDRNEYKRRQGVIGVKVSERSFGKDRRMPITNKYRE 575 >gi|260553998|ref|ZP_05826263.1| glutamine-dependent NAD+ synthetase [Acinetobacter sp. RUH2624] gi|260404884|gb|EEW98389.1| glutamine-dependent NAD+ synthetase [Acinetobacter sp. RUH2624] Length = 541 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/557 (42%), Positives = 329/557 (59%), Gaps = 27/557 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L S+ D +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQL-SEVKD--IVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRKQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 ++ E+ D +L Y +SA P E A+ Y V++ RDYV+++ F VI+GL Sbjct: 237 YIAEFDRDTKL----YKVTESA-----PALETFAEIYQGLVMATRDYVERSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE+SVGY TLY Sbjct: 348 NSFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNSLSETP-------VIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLP Y +LD I+ + EE D + ++ E V V L+ +EYKRRQ +G Sbjct: 461 QDSLPAYDVLDAILYAYI--EEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISN 553 +IT+++F R+R YPI N Sbjct: 519 RITSRAFSRERRYPIVN 535 >gi|114321696|ref|YP_743379.1| NAD+ synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|114228090|gb|ABI57889.1| DNA-directed RNA polymerase, subunit H [Alkalilimnicola ehrlichii MLHE-1] Length = 541 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 229/553 (41%), Positives = 329/553 (59%), Gaps = 23/553 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L++ +AQL VGDI GN + A E A +R+G L++F EL ++GYPP+DL+ + F Sbjct: 3 LRVTMAQLTCPVGDIEGNTRRIVGAIETARDREGAQLVVFPELAVTGYPPDDLLLRDDFT 62 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +A +A+ +++ + G VVG P +D+ G+ N+ V++ G +IA K LP YS F Sbjct: 63 RAAENALQAIQAASR--GVTAVVGVPLRDRRGLHNAAVVVQDGRVIARYAKRELPTYSVF 120 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 + R F++G S + R+G+ ICEDIW + + GAEF+ +LNASP++ K Sbjct: 121 DDSRHFVAGDSPCVVDVAGTRVGLSICEDIWWPTP-AREAVAAGAEFVVNLNASPFHRRK 179 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +R ++ + H P++YVN VGG DE+++DG S D + + F Sbjct: 180 QAEREAVLRERALDTHRPLLYVNMVGGHDEVVYDGGSLAVDAGGTVQARAPRFRSGLCTV 239 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 E D N + S EE A Y A V LRDYVQ+N F V++GLSGGI Sbjct: 240 EVDTDH----GNVNGEQSTQP-----SEEGAVYQALVTGLRDYVQRNGFPGVVLGLSGGI 290 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSA+ AA+AVDALG + VQ +M+P +YT+P SL+DA A A+ LG +Y I + F Sbjct: 291 DSAVAAAVAVDALGADRVQAVMMPSRYTAPMSLDDAQAIARMLGIRYQTTSIEPIFQSFL 350 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ + + EN+QSRIRG +LMALSN + M+L NKSE++VGY TLYGDM Sbjct: 351 SSLAPSFEGLDPDVTEENLQSRIRGTLLMALSNKTGRMVLACGNKSELAVGYATLYGDMC 410 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GG+ PLKD+YKT+V++LA +R S L P +I + P+AEL Q D++SL Sbjct: 411 GGYAPLKDVYKTEVYRLARYRQS---------LKPAFPDNIFSRPPTAELAAGQKDEDSL 461 Query: 484 PPYPILDDIIKRIVENEES-FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPYP+LDDI++R VE++ES + + TV V LL +EYKRRQ+ G K+T ++ Sbjct: 462 PPYPVLDDILERYVEHDESEALIVAAGHEPATVAQVTRLLRRNEYKRRQSAPGPKVTPRA 521 Query: 543 FGRDRLYPISNKF 555 FGRDR YPIS+ + Sbjct: 522 FGRDRRYPISSGW 534 >gi|169796959|ref|YP_001714752.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii AYE] gi|184157129|ref|YP_001845468.1| NAD synthase [Acinetobacter baumannii ACICU] gi|213156635|ref|YP_002318296.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii AB0057] gi|215484420|ref|YP_002326653.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB307-0294] gi|239501190|ref|ZP_04660500.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB900] gi|260555750|ref|ZP_05827970.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii ATCC 19606] gi|301347384|ref|ZP_07228125.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB056] gi|301513386|ref|ZP_07238623.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB058] gi|301596831|ref|ZP_07241839.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB059] gi|332854834|ref|ZP_08435584.1| NAD+ synthase [Acinetobacter baumannii 6013150] gi|332876339|ref|ZP_08444111.1| NAD+ synthase [Acinetobacter baumannii 6014059] gi|169149886|emb|CAM87777.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii AYE] gi|183208723|gb|ACC56121.1| NAD synthase [Acinetobacter baumannii ACICU] gi|213055795|gb|ACJ40697.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii AB0057] gi|213986356|gb|ACJ56655.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB307-0294] gi|260410661|gb|EEX03959.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii ATCC 19606] gi|322507027|gb|ADX02481.1| NadE [Acinetobacter baumannii 1656-2] gi|323516895|gb|ADX91276.1| NAD synthase [Acinetobacter baumannii TCDC-AB0715] gi|332727766|gb|EGJ59171.1| NAD+ synthase [Acinetobacter baumannii 6013150] gi|332735458|gb|EGJ66513.1| NAD+ synthase [Acinetobacter baumannii 6014059] Length = 541 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/557 (42%), Positives = 329/557 (59%), Gaps = 27/557 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L S+ D +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQL-SEVKD--IVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRKQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 ++ E+ D +L Y +SA P E A+ Y V++ RDYV+++ F VI+GL Sbjct: 237 YIAEFDRDTKL----YKVVESA-----PALETFAEIYQGLVMATRDYVERSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE+SVGY TLY Sbjct: 348 NSFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNSLSETP-------VIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLP Y +LD I+ + EE D + ++ E V V L+ +EYKRRQ +G Sbjct: 461 QDSLPAYDVLDAILYAYI--EEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISN 553 +IT+++F R+R YPI N Sbjct: 519 RITSRAFSRERRYPIVN 535 >gi|332868347|ref|ZP_08438106.1| NAD+ synthase [Acinetobacter baumannii 6013113] gi|332733453|gb|EGJ64632.1| NAD+ synthase [Acinetobacter baumannii 6013113] Length = 541 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/557 (42%), Positives = 329/557 (59%), Gaps = 27/557 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFHELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L S+ D +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQL-SEVKD--IVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRKQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 ++ E+ D +L Y +SA P E A+ Y V++ RDYV+++ F VI+GL Sbjct: 237 YIAEFDRDTKL----YKVVESA-----PALETFAEIYQGLVMATRDYVERSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE+SVGY TLY Sbjct: 348 NSFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNSLSETP-------VIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLP Y +LD I+ + EE D + ++ E V V L+ +EYKRRQ +G Sbjct: 461 QDSLPAYDVLDAILYAYI--EEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISN 553 +IT+++F R+R YPI N Sbjct: 519 RITSRAFSRERRYPIVN 535 >gi|118602530|ref|YP_903745.1| NAD+ synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567469|gb|ABL02274.1| NAD+ synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 626 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 230/558 (41%), Positives = 334/558 (59%), Gaps = 32/558 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K +KI IAQ+NP+VGD+ GN K + +EA+ +G DL++F EL + GYPPEDL+ ++ F Sbjct: 96 KSIKIDIAQINPIVGDLDGNTQKIIKLTKEAHIRGCDLLVFPELSLIGYPPEDLLLREEF 155 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 IQ + TL S T I+ G P + + + N ++ + V K NLPNY Sbjct: 156 IQQVQDKV-TLISQTISEDISIIFGAPSKKNDVLYNGAYLVQNSKL-WVYHKQNLPNYGV 213 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F G+ + R+G++ICED W I QGA+ + S+NASP+ Sbjct: 214 FDEKRYFEPGHKAFIFECQGKRIGLVICEDAW-TPKIISTTANQGAQIIISINASPFQVG 272 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K +R E + ++ IYVN VG QDEL+FDGASF + + Q+ F E+ Sbjct: 273 KHSQRIEQIKQRVLTTKTNFIYVNMVGAQDELVFDGASFVMNSNADITLQLPLFKEK--- 329 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN-FHKVIIGLSG 301 +S S +T+ E+ YNA VL+ +DY++KN F+ V++GLSG Sbjct: 330 -----------IQSVSFTSPTTLPDTDPIEKTIYNALVLATKDYIEKNGVFNGVVMGLSG 378 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL AIA DA+G N++ IM+ Y+YTS SLEDA A A+ Y + IH +V+ Sbjct: 379 GIDSALTLAIAADAIGTRNIKAIMMFYEYTSSMSLEDAKIQATAMNIDYHEISIHTIVDS 438 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + ++ + EN+Q+RIRG +LMA+SN ++LTTSNKSE++VGY TLYGD Sbjct: 439 FNTQLNILFNGMKADTTEENLQARIRGTLLMAISNKLGKIVLTTSNKSEMAVGYATLYGD 498 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 MSGGF PLKD+ KT V+QLA +RN+ L+ +IP +++++PSAEL P+Q DQ+ Sbjct: 499 MSGGFAPLKDVSKTLVYQLAKYRNT---------LSTIIPKRVIDRAPSAELTPNQIDQD 549 Query: 482 SLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 SLPPY LD I++ +E E I Q +N++TV+ + ++ +EYKRRQ+ G KI Sbjct: 550 SLPPYDELDAILELFIEQRYSVERIIK--QGFNEQTVKRIIQMVLNNEYKRRQSAPGPKI 607 Query: 539 TAKSFGRDRLYPISNKFR 556 + +FG++R YPI++KF+ Sbjct: 608 SQNAFGKERRYPITSKFQ 625 >gi|239815343|ref|YP_002944253.1| NAD+ synthetase [Variovorax paradoxus S110] gi|239801920|gb|ACS18987.1| NAD+ synthetase [Variovorax paradoxus S110] Length = 564 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 238/564 (42%), Positives = 320/564 (56%), Gaps = 20/564 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+AIAQLN VVGD+AGN K A +A+ QG L+L EL I+GY EDL + +F + Sbjct: 3 LKLAIAQLNFVVGDLAGNARKIVDAARQAHAQGARLLLTPELSIAGYAAEDLFLRPAFTE 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFP-----RQDQEGV---LNSVVILDAGNIIAVRDKI 115 AC A+ + + D +VVG P R V N+ ++ G I+ K Sbjct: 63 ACDDAVKGIAAALADLKDMVVVVGHPTGGSLRSRSVAVQMRYNAASVIKEGRILETYAKR 122 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 LPNY F E+R F G + +G+LICED W + + + GAE L +N Sbjct: 123 ELPNYQVFDERRYFTPGQGTCVFEAGGVSVGVLICEDAWFDEP-AELARAAGAEVLAVIN 181 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASPY+ K +R + + V LP++Y + VGGQDE++FDGASF LA Q + Sbjct: 182 ASPYHVGKEGERVARMADRARAVGLPLVYAHLVGGQDEVVFDGASFALQADGALAMQAES 241 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F E + Q + S + P + E ++A VL +RDY+ KN F Sbjct: 242 FKESLVFMQMERSPQ----GVEVVAAPSAIAAPREAEAQLWDALVLGVRDYIGKNGFPGA 297 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+GLSGGIDSAL AIAVDALGK+ V+ +M+P YT+ S DA A LG +YD + I Sbjct: 298 ILGLSGGIDSALVLAIAVDALGKDKVRAVMMPSPYTADISWIDAREMATRLGVRYDEISI 357 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 F ++ + P ENIQ+RIRG +LMALSN +++LTT NKSE++ GY Sbjct: 358 KHTFESFKGALADEFKGLPEDTAEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMATGY 417 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAELR 474 TLYGDM+GGF +KDL KT VF LA WRN+H +G P IP I+ + PSAELR Sbjct: 418 CTLYGDMAGGFAVIKDLLKTTVFALARWRNAHDPYGTGASP----IPDRIITRPPSAELR 473 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 P QTDQ+SLPPY ILD I+ R ++++E Y V V L+ +EYKRRQAP Sbjct: 474 PDQTDQDSLPPYDILDGILARYMQDDEGIDEIIAAGYERAVVERVARLIKINEYKRRQAP 533 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 VG ++T +SFG+D YPI++KF + Sbjct: 534 VGIRVTHRSFGKDWRYPITSKFNE 557 >gi|91776238|ref|YP_545994.1| NH(3)-dependent NAD(+) synthetase [Methylobacillus flagellatus KT] gi|91710225|gb|ABE50153.1| NH(3)-dependent NAD(+) synthetase [Methylobacillus flagellatus KT] Length = 535 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 239/558 (42%), Positives = 320/558 (57%), Gaps = 34/558 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+N GD+ GN AK A G L+L EL +SGY PEDL+ + F Sbjct: 1 MKIAIAQINATAGDLTGNAAKIVEQARRAEAAGATLLLCPELALSGYSPEDLLLRDDFYH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L + +VVG PR+ N+ +L+AG I K LPN S F Sbjct: 61 ACERALYALAQEL-PATLTVVVGHPRKYLGNRYNAASVLEAGRICHTYHKALLPNDSVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G I +LGI+IC D+W + + GA L LNASPY+ K Sbjct: 120 EVRYFSEGSEALVINHLGCKLGIVICADVWA-PEPARRARDAGATVLLVLNASPYHIGKQ 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R+ +V +I LP++Y N VGGQDEL+FDGASF + + L Q+ F E + Sbjct: 179 QERYAVVRDRIKETGLPVVYANLVGGQDELVFDGASFVMNDEGALTQQLPSFDEALGIVS 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYI-PLQE-EEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + SD + I PL E A Y A L RDYV KNNF V++GLSGG Sbjct: 239 F------------SDGAPEPAEIHPLPGLEPAVYQALSLGFRDYVLKNNFPGVLLGLSGG 286 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL AIAVDALG VQ +M+P +T+ SLEDA A A L +Y + I + F Sbjct: 287 IDSALTLAIAVDALGAGKVQAVMMPSAFTASISLEDAQAMAAGLNVRYSEIAIGPVFESF 346 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + ++ P EN+Q+RIRG +LMALSN +M++TT NKSE +VGY TLYGDM Sbjct: 347 CAALAPEFAGRPFDTAEENLQARIRGTLLMALSNKFGSMVVTTGNKSETAVGYSTLYGDM 406 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF LKD+ KT V+QLA +RN+ +++VIP I+ + PSAELR QTDQ+S Sbjct: 407 AGGFALLKDVSKTLVYQLAKYRNT---------ISQVIPERIILRPPSAELRHGQTDQDS 457 Query: 483 LPPYPILDDIIKRIVENEESFINNDQE-----YNDETVRYVEHLLYGSEYKRRQAPVGTK 537 LP Y +LD I++ VEN+ S+ +E Y ++ V V L+ +EYKRRQAP+G + Sbjct: 458 LPDYAVLDGIMEAYVENDYSW----EEILALGYREQDVLRVTRLVDRNEYKRRQAPIGVR 513 Query: 538 ITAKSFGRDRLYPISNKF 555 +T + FG+DR YP++NKF Sbjct: 514 VTKRGFGKDRRYPLTNKF 531 >gi|239617986|ref|YP_002941308.1| NAD+ synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506817|gb|ACR80304.1| NAD+ synthetase [Kosmotoga olearia TBF 19.5.1] Length = 578 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/578 (40%), Positives = 337/578 (58%), Gaps = 40/578 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ+N VGD+ GN+ K + A ++G+ +++F EL I+GYPPEDLV + FI+ Sbjct: 3 VRLGLAQINTTVGDLKGNVTKINEYIDLAEKKGVSILVFPELAITGYPPEDLVLRTGFIK 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 SA++ ++ T D +++GF D E + N+ +L G +AV K++LPNYS F Sbjct: 63 DNLSALEKVREYTIDKELLVILGFVDFDFE-IYNAAAVLHNGEKVAVYRKMHLPNYSVFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F +G + +++R+G+ ICED+W S GA + +L+ASP+ K Sbjct: 122 EKRYFSAGKKALILRNKNLRIGVNICEDLWVPSGPINEQTIFGANLIINLSASPFTAGKS 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQQQLAFQMKHFSEQNFM 242 +KR E+++ + S I Y N VGGQDEL+FDG S DG+ +F + F E+ F+ Sbjct: 182 RKRLELLSTRASEYSCAIAYCNLVGGQDELVFDGLSAVVLPDGR---SFIARGFEEELFI 238 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADY----------------------NACV 280 T+ D Y + L+E+E + NA V Sbjct: 239 TDLDLDIATRYNLYEGKRKSFKANAELEEKEISFTLRDNIEFLTSHRIAEGIEEIFNALV 298 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L LRDYV+KN F V +GLSGG+DS+L A IAV+ALG+ENV +++P +YTS S+EDA Sbjct: 299 LGLRDYVKKNGFSTVTLGLSGGMDSSLAACIAVEALGRENVVGVLMPSEYTSNTSIEDAK 358 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 AK LG K +PI + + + +S + + ENIQ+RIRGNILMALSN Sbjct: 359 MLAKNLGIKTLTVPITAIYHSYLGTLSDAFKGREQDVTEENIQARIRGNILMALSNKFGW 418 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++L T NKSE++ GY TLYGDM+GGF LKD+YKT V++LA + N TE+I Sbjct: 419 LVLATGNKSELATGYATLYGDMAGGFAVLKDVYKTDVYRLADYFNRT-------KKTEII 471 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN---DQEYNDETVRY 517 P + EK PSAELRP+QTDQ++LPPY LD I+K + EE N + +++ TV + Sbjct: 472 PRRVFEKPPSAELRPNQTDQDTLPPYETLDKILKLFI--EEGLSANEILEHGFDNNTVNF 529 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 LL +EYKRRQ G KI+ ++FG+D PI+N + Sbjct: 530 TLKLLKKNEYKRRQGAPGIKISRRAFGKDWRMPITNDY 567 >gi|134098194|ref|YP_001103855.1| glutamine-dependent NAD(+) synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291009113|ref|ZP_06567086.1| glutamine-dependent NAD(+) synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133910817|emb|CAM00930.1| glutamine-dependent NAD(+) synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 610 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 230/600 (38%), Positives = 328/600 (54%), Gaps = 52/600 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ++ +L+IA+AQ+N VGDIAGN + EA +QG L+ F E ++GYP EDL +K Sbjct: 17 VMPQLRIALAQVNASVGDIAGNSSMVLDWTREAVQQGAHLVAFPETVLAGYPVEDLALRK 76 Query: 61 SFIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 SF A + +++L G G +VVG +D EGV NS +L G ++A DK +L Sbjct: 77 SFAAANRAEVESLAQRLQQAGCGDALVVVGHLDRDDEGVRNSASLLYDGRVVATYDKHHL 136 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F E R F G+ + + +G++ICEDIW+N L + G + + +N+S Sbjct: 137 PNYGVFDEARYFAPGFDLPIVRLHGLDVGVVICEDIWQNGGPVSALGEVGVDLVVCINSS 196 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R +V G+ + P+ YVN VGGQDEL+FDG S Q+ + F+ Sbjct: 197 PYERAKDDQRTPLVAGRAAEAGAPMAYVNMVGGQDELVFDGDSMVVGTDGQVLARAPQFT 256 Query: 238 EQ------NFMTEWHYDQQLSQWNYMSDDS------------------------------ 261 E + H + + ++ Sbjct: 257 EHLLVLDMDLTAGGHTATTVPEPEVPAEGGMQFVPASRFLRPAFDITRTVLQADPLPGYE 316 Query: 262 ---ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK 318 A + PL +E + A V LRDYVQKN F V G SGGIDSA+CAA+ DA+G Sbjct: 317 PLPAQPLPEPLSDEAEVWAALVTGLRDYVQKNGFRSVTFGFSGGIDSAVCAALCADAIGA 376 Query: 319 ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV 378 +++ + +P Y+S S DAA A+ LGC +DV PI D+V+ F S + E SG+ Sbjct: 377 DSLYGVSMPSHYSSEHSRSDAADLARRLGCHFDVQPIGDMVDVFVSRL------ELSGLA 430 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 EN+Q+R RG LMALSN ++L NK+E++VGY T+YGD GGF P+KD+ KT V+ Sbjct: 431 EENVQARCRGVTLMALSNQHGHLVLAPGNKTELAVGYSTIYGDAVGGFAPIKDVPKTLVW 490 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE 498 +LA WRN+ G P IP + + K PSAELRP Q D +SLPPY ILD ++ VE Sbjct: 491 KLAQWRNAEAEKRGEVP---PIPENSISKPPSAELRPDQVDTDSLPPYEILDVVLDGYVE 547 Query: 499 NEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + + + E ++ V + L+ +EYKRRQ P GTKIT K+FGRDR P++N++R+ Sbjct: 548 GDRGYADLVGEGFDAALVERIIQLVDRAEYKRRQYPPGTKITLKAFGRDRRLPVTNRWRE 607 >gi|294790940|ref|ZP_06756098.1| NAD+ synthetase [Scardovia inopinata F0304] gi|294458837|gb|EFG27190.1| NAD+ synthetase [Scardovia inopinata F0304] Length = 560 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 231/564 (40%), Positives = 326/564 (57%), Gaps = 34/564 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + L A+AQ++ VGDI GN K A++QG D++LF E+ ++GYP EDL F+ +F Sbjct: 22 QNLVFALAQIDTCVGDIEGNARKIIDFSRMAHQQGADIVLFPEMTLTGYPIEDLAFRATF 81 Query: 63 IQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLP 118 +A D + D G G +V+G D +G+ N ++IL G + A DK LP Sbjct: 82 RKAAYRTADQVAVQLQDQGLGSLYVVIGTVGADVDGLPRNRLLILHNGRVEASYDKHFLP 141 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F E R F +G + + R+G ICEDIW+ L + + L ++N SP Sbjct: 142 NYGVFDEFRIFSAGQETLTLDIKGKRIGFAICEDIWQEGGTVAALAQDHIDVLATINGSP 201 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R ++ + VH P+IY+NQVGGQD+L+FDG SF Q+ Q F E Sbjct: 202 YEEGKYHTRVDLCRKRAGQVHAPVIYLNQVGGQDDLVFDGGSFVVGTDGQILAQAGKFQE 261 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + W+ + + S + + PL +E Y ACV LRDY++KN+F V++G Sbjct: 262 SLLL-----------WS-LGNTSPTDLVSPLDPDEEVYQACVAGLRDYMRKNHFSGVVLG 309 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A+IA DA G +NV I +P +Y+S S +DAA A+ LG YD+ PI L Sbjct: 310 LSGGIDSALVASIAADACGGDNVWGISMPSRYSSDGSRDDAADLARRLGAHYDIQPIEPL 369 Query: 359 VNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 F Q+E S GI AEN+Q+RIRG I+MA SN + L T NKSE++ GY Sbjct: 370 FQSF--------QQELSLEGIAAENLQARIRGVIVMAYSNSHGLLALATGNKSELACGYS 421 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGD GGF P+KDL KT+V+QLA WRN +G P IP + + K+PSAELRP Sbjct: 422 TIYGDAVGGFAPIKDLLKTRVWQLARWRNRAAQEAGEVP---PIPENSINKAPSAELRPG 478 Query: 477 QTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 Q D +SLP Y +LD ++ +E + +N+ ++ +TV V L+ +E+KRRQ P Sbjct: 479 QKDSDSLPEYAVLDQVLAAYIEKAHGRQDLLNDG--FDPKTVDTVMRLVDKAEWKRRQYP 536 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 +G K+TA +FGRDR P+++ FR+ Sbjct: 537 LGPKVTALAFGRDRRLPVTSAFRE 560 >gi|300087867|ref|YP_003758389.1| NAD+ synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527600|gb|ADJ26068.1| NAD+ synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 541 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/559 (40%), Positives = 333/559 (59%), Gaps = 24/559 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++A+AQ+N VGD GN++ RR ++A G L++F E+ +SGYPPEDL+ K S Sbjct: 1 MNDIRLALAQINTTVGDYVGNVSLIRRYLKDAADGGAGLVVFPEMAVSGYPPEDLLHKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+A A+ + D A VVGF +G+ N+ ++ G I + K +LPNY Sbjct: 61 FIEAGQQALAEVAGTVGDLTA--VVGFVDTAPDGLYNAAAVIHQGEIRHIYHKRHLPNYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F E+R F G +D VF +RLG+ +CEDIW++ + GA+ + +++ASP Sbjct: 119 VFDEQRYFKPG--DDCPVFEGTGGLRLGVNVCEDIWRDDGPMVVQSRDGADIIINISASP 176 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 ++ K +R ++ + + +P+++ N VGGQDEL+FDGAS D ++ + + F E Sbjct: 177 FHRGKYHQRERMLKARAAGGGVPVVFCNLVGGQDELVFDGASVVIDAGGRVLGRARQFEE 236 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + + D + D +P + +E Y A V RDYV KN F +V++G Sbjct: 237 ELLFVDLAGDGR--------DGRGIVAELPDEYDEI-YRALVTGTRDYVMKNAFRQVVVG 287 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDS+L AA+AVDALG V +++P ++++P+S AA A LG + + +PI Sbjct: 288 LSGGIDSSLVAAVAVDALGASAVNGLIMPSRFSAPESAAYAAELADNLGIRVNEIPIEGP 347 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + ++ + I ENIQ+RIRGN+LMALSN ++L T NKSE + GY TL Sbjct: 348 YAAYLESLTGVFTGQAPDITEENIQARIRGNLLMALSNKFGWLVLNTGNKSETATGYTTL 407 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGF +KD+ KT V+ L +RN T+G +IP SI++++PSAELRP Q Sbjct: 408 YGDMAGGFAVIKDVPKTLVYDLCRYRNR---TAG----RTLIPQSIIDRAPSAELRPGQK 460 Query: 479 DQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D +SLPPY ++D I++ VE + + ++ ETVR + L+ GSEYKRRQAP G K Sbjct: 461 DADSLPPYDVMDPILEAYVEQDLGVADIIGLGHDPETVRRIAGLVDGSEYKRRQAPPGVK 520 Query: 538 ITAKSFGRDRLYPISNKFR 556 IT K+FGRDR PI+NKFR Sbjct: 521 ITPKAFGRDRRLPITNKFR 539 >gi|254482845|ref|ZP_05096082.1| NAD synthase family protein [marine gamma proteobacterium HTCC2148] gi|214036926|gb|EEB77596.1| NAD synthase family protein [marine gamma proteobacterium HTCC2148] Length = 543 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 229/561 (40%), Positives = 337/561 (60%), Gaps = 27/561 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKK 60 + L I +AQ+N +VGD GN + + A + +++F EL +SGYPPEDL+ + Sbjct: 1 MASLNILMAQMNTLVGDFDGNTKRVIEIVQSAIDTHEQPVVVFPELTLSGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +++ L S + A +V+G+P+++ + N+ ++ G ++A K LPNY Sbjct: 61 SIELRVDQSLELLCSQLPEA-AWVVIGYPKREGGELYNAAGVIHDGKLVAEYRKQCLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F+ G + + + +++ + ICEDIW+ + + GAE L +LN+SPY+ Sbjct: 120 QVFDEKRYFVPGSAPCVLNIQGVQVALSICEDIWEK-HPTADAAEAGAEILLNLNSSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R E+V + PI+YVNQVGGQDEL+FDG SF +A F E Sbjct: 179 RGKRGERWEMVAERARQAAFPIVYVNQVGGQDELVFDGGSFAVTADGTVAAAAPSFEEGE 238 Query: 241 FMTEW-HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + W HYD + N S + P+ E A + A V+ +RDYV KN F V++GL Sbjct: 239 Y---WLHYDNE----NKNQPFSGQAVNAPMNEMAATWQALVMGVRDYVNKNGFKGVVLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL A+AV+ALG E V+ IM+P++YTS S++DAA +K G + V+ I ++ Sbjct: 292 SGGIDSALTLAVAVEALGPERVEAIMMPFRYTSQMSVDDAAEQSKTQGVTHTVISIENIY 351 Query: 360 NHFF-SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F SL +F P EN+Q+R RG +LM++SN ++LTT NKSE++VGY TL Sbjct: 352 ASFMASLEEEFAGTTPD-TTEENLQARCRGVLLMSISNKKGVLVLTTGNKSEMAVGYSTL 410 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGF+ LKD+ KT VF+L +RN+ LGP IP ++++ PSAEL P Q Sbjct: 411 YGDMAGGFDVLKDVPKTLVFELCRYRNT------LGP---CIPQRVIDRPPSAELAPDQK 461 Query: 479 DQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 D++SLPPY ILD I++ VE + E+ I D ++ E V+ V L+ +EYKRRQAP+G Sbjct: 462 DEDSLPPYDILDQILEMYVERDMSAEAII--DHGFDREQVQRVLRLVDINEYKRRQAPIG 519 Query: 536 TKITAKSFGRDRLYPISNKFR 556 +IT + FGRDR YPI++ +R Sbjct: 520 VRITRRGFGRDRRYPITSGWR 540 >gi|226951210|ref|ZP_03821674.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Acinetobacter sp. ATCC 27244] gi|226838040|gb|EEH70423.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Acinetobacter sp. ATCC 27244] Length = 541 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/555 (42%), Positives = 330/555 (59%), Gaps = 23/555 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G+I N K A +Q DLI+F EL GYP EDL+ + + Sbjct: 1 MKNFKIALAQFSPHIGNIDANTQKMVEQANLAKQQQADLIVFPELSTLGYPAEDLILRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A+ L S+ D +V GF Q ++G NS ++ G ++ + +K NLPNY Sbjct: 61 LQKRTQKALAQL-SEVKD--IVMVFGFVHQTEDGHRYNSAAVMKDGQVLGIYNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICED+W + N K L + E + LNASPY Sbjct: 118 GVFDEKRYFQEGHQHLVFEYLGHKFGVLICEDVW-SLNTVKQLSQLNVETVLILNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ ++L I+YVNQVGGQD+LIFDG+SF + +LA Q F E Sbjct: 177 VGKPQHRIQTLSELAKQLNLNIVYVNQVGGQDDLIFDGSSFVNNHNGELALQAPSFKEAV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 + TE+ ++Q + D+ IP + A+ Y A V+S RDYVQ++ F VI+GL Sbjct: 237 YFTEY----DVAQKQFKKADA-----IPALDTFAEIYQALVMSTRDYVQRSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G + VQ +M+PY YTS S+EDA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGADKVQAVMMPYTYTSQMSVEDATEQARRMGVTFGIAEIHPIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L+T NKSEISVGY TLY Sbjct: 348 NSFMQTLFPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSEISVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF+ LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFSVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y +LD I+ +E + S + + Y + V V L+ +EYKRRQ +G +I Sbjct: 461 QDSLPAYDVLDAILYAYIEEDLSQADIIAKGYEADVVEKVIRLVDRNEYKRRQGAIGPRI 520 Query: 539 TAKSFGRDRLYPISN 553 ++++F R+R YPI N Sbjct: 521 SSRAFSRERRYPIVN 535 >gi|294649596|ref|ZP_06727014.1| glutamine-dependent NAD(+) synthetase [Acinetobacter haemolyticus ATCC 19194] gi|292824505|gb|EFF83290.1| glutamine-dependent NAD(+) synthetase [Acinetobacter haemolyticus ATCC 19194] Length = 541 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/555 (42%), Positives = 329/555 (59%), Gaps = 23/555 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G+I N K A +Q DLI+F EL GYP EDL+ + + Sbjct: 1 MKNFKIALAQFSPHIGNIDANTQKMVEQANLAKQQQADLIVFPELSTLGYPAEDLILRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L S+ D +V GF Q ++G NS ++ G ++ + +K NLPNY Sbjct: 61 LQKRTQKAFAQL-SEVKD--IVMVFGFVHQTEDGHRYNSAAVMKDGQVLGIYNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICED+W + N K L + E + LNASPY Sbjct: 118 GVFDEKRYFQEGHQHLVFEYLGHKFGVLICEDVW-SLNTVKQLSQLNVETMLILNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ ++L I+YVNQVGGQD+LIFDG+SF + +LA Q F E Sbjct: 177 VGKPQHRIQTLSELAKQLNLNIVYVNQVGGQDDLIFDGSSFVNNHNGELALQAPSFKEAV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 + TE+ ++Q + D+ IP + A+ Y A V+S RDYVQ++ F VI+GL Sbjct: 237 YFTEY----DVTQKQFKKADA-----IPALDTFAEIYQALVMSTRDYVQRSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G + VQ +M+PY YTS S++DA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGADKVQAVMMPYTYTSQMSVKDATEQARRMGVTFGIAEIHPIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L+T NKSEISVGY TLY Sbjct: 348 NSFMQTLFPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSEISVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF+ LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFSVLKDVYKTIVFELAKYRNSLSETP-------VIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y +LD I+ +E + S + + Y E V V L+ +EYKRRQ +G +I Sbjct: 461 QDSLPAYDVLDAILYAYIEEDLSQADIIAKGYEAEVVEKVIRLVDRNEYKRRQGAIGPRI 520 Query: 539 TAKSFGRDRLYPISN 553 ++++F R+R YPI N Sbjct: 521 SSRAFNRERRYPIVN 535 >gi|293609041|ref|ZP_06691344.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829614|gb|EFF87976.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 541 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/557 (42%), Positives = 328/557 (58%), Gaps = 27/557 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQVNQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L ++ D +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQL-AEVKD--IVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRIQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDI 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 ++ E+ D +L Y +SA P E A+ Y V++ RDYV+++ F VI+GL Sbjct: 237 YIAEFDRDTKL----YKVTESA-----PALETFAEIYQGLVMATRDYVERSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGAEKVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L T NKSE+SVGY TLY Sbjct: 348 NSFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLATGNKSELSVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLP Y +LD I+ + EE D + ++ E V V L+ +EYKRRQ +G Sbjct: 461 QDSLPAYDVLDAILYAYI--EEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISN 553 +IT+++F R+R YPI N Sbjct: 519 RITSRAFSRERRYPIVN 535 >gi|297182590|gb|ADI18749.1| NAD synthase [uncultured gamma proteobacterium HF4000_36I10] Length = 538 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 238/569 (41%), Positives = 334/569 (58%), Gaps = 41/569 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + IA+AQ+NPVVGDI GN K ++A EA +G L +F EL ++GYPPEDL+ + Sbjct: 1 MGADVTIAMAQINPVVGDIVGNTEKIQQAAREAAAKGAQLAMFPELALTGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A+ L +++ D ++VG P + N +L G + A+ K LPNY Sbjct: 61 SLRIRVDEALRQLAAESTD--IALLVGLPLHADGKLYNGAALLRGGKVEALYRKHRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + GI ICEDIW + GA+ + +LNASPY+ Sbjct: 119 RVFDEMRYFAAGSEASVFELDGVSFGITICEDIW-SPEPAAKAVAAGADLILNLNASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K ++R +V + ++P++YVNQVG QDEL+FDG SF L + SE Sbjct: 178 VGKQREREAVVAERCRENNVPVLYVNQVGAQDELVFDGGSFALSSDGSLKARAHAVSET- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 LS + + PL +E A Y+A V+ +RDY+ KN F V++GL Sbjct: 237 ----------LSLITLRDGEPLAGEVQPLGDELATIYDALVVGVRDYINKNGFKGVVLGL 286 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALG E V+ +M+P+KYTS SLEDA A A LG Y V+ I + Sbjct: 287 SGGIDSALTLAIAVDALGAERVEAVMMPFKYTSGMSLEDAEAEANTLGVSYKVISIEPMY 346 Query: 360 NHFFSLMSQFLQEEPSGI----VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 F S+ L+EE +G+ ENIQSRIRG +LMA+SN +++LTT NKSE++VGY Sbjct: 347 EAF----SEALREEFAGLPVDKTEENIQSRIRGGLLMAISNKKGSLVLTTGNKSEMAVGY 402 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGDM GGF LKD+ K +VF L+ +RNS L+ VIP ++++ PSAEL P Sbjct: 403 ATLYGDMCGGFAVLKDVSKQRVFALSEYRNS---------LSPVIPQRVIDRPPSAELAP 453 Query: 476 HQTDQESLPPYPILDDIIKRIVENEES-----FINNDQEYNDETVRYVEHLLYGSEYKRR 530 Q D++SLPPY +LD I++ +E+++S + ++E + VR V+ +EYKRR Sbjct: 454 DQKDEDSLPPYEVLDQILEHYIEHDQSAEAIIAMGFEREAVGQVVRLVDI----NEYKRR 509 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFRDHI 559 QA +GT+IT + FGRDR YPI+N+++ + Sbjct: 510 QAAIGTRITERGFGRDRRYPITNRWQAGV 538 >gi|169634065|ref|YP_001707801.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii SDF] gi|169152857|emb|CAP01886.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii] Length = 541 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/557 (42%), Positives = 328/557 (58%), Gaps = 27/557 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L S+ D +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQL-SEVKD--IVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL +YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRKQTLSELAKQLHLNTVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 ++ E+ D +L Y +SA P E A+ Y V++ RDYV+++ F VI+GL Sbjct: 237 YIAEFDRDTKL----YKVVESA-----PALETFAEIYQGLVMATRDYVERSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE+SVGY TLY Sbjct: 348 NSFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNSLSETP-------VIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLP Y +LD I+ + EE D + ++ E V V L+ +EYKRRQ +G Sbjct: 461 QDSLPAYDVLDAILYAYI--EEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISN 553 +IT+++F R+R YPI N Sbjct: 519 RITSRAFSRERRYPIVN 535 >gi|171463824|ref|YP_001797937.1| NAD+ synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193362|gb|ACB44323.1| NAD+ synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 539 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/562 (41%), Positives = 332/562 (59%), Gaps = 39/562 (6%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 KIA+AQ+NP++GD+AGN +A +A QG L++ EL ++GYPPEDL+ + +FI+A Sbjct: 5 KIALAQINPLLGDLAGNAQLIYKAALDAYSQGAKLVVTPELSLTGYPPEDLLLRPAFIEA 64 Query: 66 CSSAIDTL-KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ L K ++VG P++ G+ N +L +G +IA K LPN+ F Sbjct: 65 AQQQLELLMKELAQHSDLTVIVGHPKKTSVGLQNYASVLQSGKVIAGYAKQELPNHEVFD 124 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E R F+ G N VF IR G+++CED W ++ K GA+ L NASPY+ Sbjct: 125 EVRYFVPG--NQACVFECDGIRYGMILCEDAW-HAGPAKQAHAAGAQVLLVPNASPYHLK 181 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R +++ I+ +P++YVN VGGQDEL+FDG SF + + M F + Sbjct: 182 KEALRIDVLREHIAQTKMPLVYVNTVGGQDELVFDGGSFALNSHGDVVMAMPQFETGLGV 241 Query: 243 TEWHYDQQLSQ-WNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLS 300 +L + W P Q EA Y A VL +RDYV KN+F VIIGLS Sbjct: 242 VSASSSGELEKGW-----------ITPPQSVEAQAYQALVLGVRDYVTKNHFPGVIIGLS 290 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AIAVDALG + V+ +M+ YT+ S DA A+ L +YD +PI V+ Sbjct: 291 GGVDSALVLAIAVDALGADKVRAVMMASHYTADISWIDAREMAENLSMQYDEIPISGPVD 350 Query: 361 HF-FSLMSQFLQEEPSGI----VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 SL QF +G+ ENIQ+R+RG +LMALSN + ++LTT NKSE++VGY Sbjct: 351 ALEASLAKQF-----TGLNVDATEENIQARVRGTLLMALSNKTGRLVLTTGNKSEMAVGY 405 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGDM+GGF +KD+ KT V++L ++RNS + +IP IL ++PSAELRP Sbjct: 406 CTLYGDMAGGFAVIKDIAKTLVYRLCAYRNS---------IAPIIPERILTRAPSAELRP 456 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 Q DQ+SLP Y +LD I++R +E +S ++ E+V V L+ +EYKRRQAP Sbjct: 457 DQKDQDSLPSYEVLDGIVERYMEQNQSIAQIIAAGFDPESVEKVTRLIKLNEYKRRQAPP 516 Query: 535 GTKITAKSFGRDRLYPISNKFR 556 G ++TA++FGRD YPI+++FR Sbjct: 517 GVRVTARAFGRDWRYPITSQFR 538 >gi|117620870|ref|YP_855239.1| NAD synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562277|gb|ABK39225.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 540 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 233/556 (41%), Positives = 338/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L + +AQLN VG I N K A EA+RQG DL++ +EL ++GYPPEDL+ + Sbjct: 1 MAKALSLMLAQLNLTVGAIEDNCDKVLAAAAEADRQGADLLVCSELALTGYPPEDLLLRV 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + +A+ L + G I+VG P +D E + N+ + + G ++A K +LPNY Sbjct: 61 DLMIRVEAALARLAA--WQGACAILVGHPWRDGEALYNAASLYEQGKLVARYFKQDLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F + + FR +LG+LICED+W+ K GAE L ++NASPY Sbjct: 119 GVFDEKRYFTAATETCVVPFRGHQLGLLICEDLWQPGPA-LAAKAAGAELLLTINASPYD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R E++ + LP++Y+NQV GQDELIFDG S F+ Q +L ++ F+E+ Sbjct: 178 QEKPWIRRELMAERCDQTGLPLVYLNQVCGQDELIFDGCSKVFNSQGELTHKLAPFAEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + Q + + + PL+ Y A VL++RDYV KN FH ++GLS Sbjct: 238 ALVRFADGQPVKEREPAA---------PLEPLAETYQALVLAVRDYVTKNGFHGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G + VQ +M+P++YT+ S+EDA A+ +G +++++ I + Sbjct: 289 GGIDSALTLAIAADAIGADKVQAVMMPFRYTAQMSVEDAKEQAERMGVEFNIISIEPMFE 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 GFMAQLAPLFEGTARDTTEENLQARCRGVLLMALSNKRRCIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L +RNS + VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLCEYRNS---------VDYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I+KR VE + S + E + + VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILKRYVEEDASVADMVAEGFEEAVVRKVIRLVDLNEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|121608702|ref|YP_996509.1| NAD+ synthetase [Verminephrobacter eiseniae EF01-2] gi|121553342|gb|ABM57491.1| NAD+ synthetase [Verminephrobacter eiseniae EF01-2] Length = 552 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 241/566 (42%), Positives = 333/566 (58%), Gaps = 31/566 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L I AQLN VVGD+ N K A +A+ +G L+L EL I GY EDL + +FI Sbjct: 3 LSICTAQLNFVVGDMPANAQKIIAAARQAHARGARLLLTPELAICGYAAEDLFLRPAFIA 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPR------QDQEGVLNSVVILDAGNIIAVRDKINL 117 AC A+ T+ +T D IV+G PR +N+ +L AG I K L Sbjct: 63 ACDDAVKTVARETADLKDLAIVLGHPRGFAPEAAAFSACINAASVLRAGQIEQTYAKREL 122 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 PNY F E+R F++G+ P VF +R+G+LICED W + + GA+ L +N Sbjct: 123 PNYQVFDERRYFVAGHK--PCVFDMGGLRVGLLICEDAWFAAP-ARDCALAGAQLLAVIN 179 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASP++ K +R +I+ ++ LP++Y + VGGQDE++F+G SF D +A + Sbjct: 180 ASPFHLGKGAEREQIMRERVLETGLPLVYAHLVGGQDEVVFEGRSFALDADGSVAGRAPG 239 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHK 294 F E+ + H S +D + P + EAD ++A VL +RDYV KN F Sbjct: 240 FEEK--LVYAHIHPSSSAIRIEADIA------PERSLEADLWDALVLGVRDYVGKNGFAG 291 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++GLSGGIDSAL AIAVDALG + ++T+M+P YT+ SL DA A+ LG ++D + Sbjct: 292 ALLGLSGGIDSALVLAIAVDALGADKLRTVMMPSPYTADISLIDARELARRLGVRHDEIS 351 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I F + ++ P EN+Q+RIRG +LMALSN A++LTT NKSE+S G Sbjct: 352 ITPQWEAFKAALAPAFAGLPEDTTEENLQARIRGTLLMALSNKFGALVLTTGNKSEMSTG 411 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAEL 473 Y TLYGDM+GGF +KD+ KT+VF LA WRN++ SG P IP I+ + PSAEL Sbjct: 412 YCTLYGDMAGGFAVIKDVAKTRVFDLARWRNANDPYGSGANP----IPQRIIARPPSAEL 467 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 RP QTDQ+SLPPY +LD I+ R +EN+ ES I + D V V L+ +EYKRR Sbjct: 468 RPDQTDQDSLPPYEVLDAIMSRYMENDEPIESIIASGFARAD--VERVTRLIKFNEYKRR 525 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QAPVG ++T +SFG+D YPI+++FR Sbjct: 526 QAPVGIRVTRRSFGKDWRYPITSRFR 551 >gi|298571422|gb|ADI87762.1| NAD+ synthetase [uncultured Nitrospirae bacterium MY4-5C] Length = 577 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 233/587 (39%), Positives = 337/587 (57%), Gaps = 43/587 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+K L++A+AQ+NP VG I N K E+A R D++ F EL I+GYPPEDL+ K Sbjct: 1 MVKTLRLALAQINPTVGSIKKNSEKIISFIEDARRHSADIVAFPELCITGYPPEDLLLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 SF++ A+D +K T+D +VVGF + Q+ + N+ +L II + KI LPNY Sbjct: 61 SFLKDNIKALDEIKRHTND--IAVVVGFADK-QDDIYNAAALLYNHQIIDIYHKIFLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F SG + +G+ ICEDIW GAE + ++NASPY Sbjct: 118 GVFDELRYFQSGVLSPVYEIAGCLVGLNICEDIWYPDGPAYKQSLAGAELIININASPYG 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ- 239 NK K + +++ + + + Y+N VGGQDEL+FDG+S FD ++ + F+E+ Sbjct: 178 FNKSKAKDTMLSARAFDNRVILAYLNTVGGQDELVFDGSSTVFDSTGEVLARGASFTEEL 237 Query: 240 ---------NFMTEWHYDQQLSQWNYMSDDSASTMYI-----------------PLQEEE 273 F++ H ++ + + + +++ P+++ + Sbjct: 238 IVVDLDMEGVFVSRLHDPRRRQKVKALCHNEIKRVFVCDRVPGEKSPIKLIKRMPVRQMD 297 Query: 274 AD---YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 D YNA VL RDYV KN F V+IGLSGGIDS++ A IAVDA+G ENV+ I +P Y Sbjct: 298 RDEEIYNALVLGTRDYVTKNGFKSVVIGLSGGIDSSIVACIAVDAIGPENVRGIFMPSPY 357 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 TS S ED ++ L + +PI + + + ++ + + EN+Q+RIRGNI Sbjct: 358 TSQDSREDVCELSENLKIRTTEIPIAGIFSTYLGELTAAFDGKAADTTEENLQARIRGNI 417 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMA+SN ++LTT NKSE+S GY TLYGDM+GGF +KD+ K V++L+ WRNS Sbjct: 418 LMAMSNKFGPLVLTTGNKSEMSAGYATLYGDMAGGFAVIKDVPKMMVYKLSRWRNS---- 473 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 +TEVIP +L K+P+AELR +Q D +SLPPY ILD II+ VE E Sbjct: 474 -----VTEVIPERVLTKAPTAELRHNQKDSDSLPPYEILDTIIESYVEKEMGLEEITTLG 528 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +++TVR L+ GSEYKRRQ+P G KIT ++FG+DR +PI+N +R Sbjct: 529 IDEQTVRKALALIDGSEYKRRQSPPGIKITGRAFGKDRRFPITNGYR 575 >gi|148244626|ref|YP_001219320.1| NAD+ synthase (glutamine-hydrolysing) [Candidatus Vesicomyosocius okutanii HA] gi|146326453|dbj|BAF61596.1| NAD+ synthase (glutamine-hydrolysing) [Candidatus Vesicomyosocius okutanii HA] Length = 543 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/558 (41%), Positives = 337/558 (60%), Gaps = 32/558 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K +KI IAQ+NP+VGD+ GN K + +EA +G DL++F EL + GYPPEDL+ + F Sbjct: 13 KSIKIDIAQINPIVGDLNGNTQKIIKLTQEAYIRGCDLLVFPELSLIGYPPEDLLLHEGF 72 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +Q + TL + T I+ G P + + + NS ++ + K NLPNY Sbjct: 73 VQQVQDKV-TLINQTISNNISIIFGAPYKKDDILYNSAYLIQNSQV-YFYHKQNLPNYGV 130 Query: 123 FHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG N+P +F + ++ ++ICED W S+I +G + + S+NASP+ Sbjct: 131 FDEKRYFESG--NEPFIFECQGKKISLVICEDAW-TSDIISISANKGVQIIISINASPFQ 187 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R E + ++ IYVN VG QDEL+FDGASF + + Q+ F E Sbjct: 188 IGKHSQRIEQIKQRVLETKTNFIYVNMVGAQDELVFDGASFAMNSNANITLQLPLFKEA- 246 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN-FHKVIIGL 299 +S S T++ E+ Y+A VL+ +DY++KN+ F+ V+IGL Sbjct: 247 -------------VQSVSFTSPITLFDTDPIEKTIYDALVLATKDYIEKNDVFNGVVIGL 293 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIA DA+G E+++ IM+PYKYTS SLEDA A + Y + IH +V Sbjct: 294 SGGIDSALTLAIAADAIGTEHIKAIMMPYKYTSNISLEDAKIQATTMNVDYHEINIHIIV 353 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + F + ++ + ENIQ+RIRG +LMA+SN ++LTTSNKSEI+VGY TLY Sbjct: 354 DSFNTQLNTLFIGMETDTTEENIQARIRGTLLMAISNKLGKIVLTTSNKSEIAVGYTTLY 413 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDMSGGF PLKD+ KT V+QLA +RN+ ++ +IP ++++ PSAEL P+Q D Sbjct: 414 GDMSGGFAPLKDVNKTLVYQLAKYRNT---------ISTIIPERVIDRKPSAELAPNQAD 464 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y LD I+ +E + S + Q +N++TV+Y+ ++ +EYKRRQ+ G KI Sbjct: 465 QDSLPSYNELDAILTLFIEQKYSVKHIIKQGFNEQTVKYITQMVLNNEYKRRQSAPGPKI 524 Query: 539 TAKSFGRDRLYPISNKFR 556 + +FG++R YP+++KF+ Sbjct: 525 SPNAFGKERRYPMTSKFQ 542 >gi|149928337|ref|ZP_01916578.1| NAD synthetase [Limnobacter sp. MED105] gi|149822922|gb|EDM82167.1| NAD synthetase [Limnobacter sp. MED105] Length = 544 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/555 (42%), Positives = 328/555 (59%), Gaps = 21/555 (3%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +AIAQLN VGD+ GN AK +A QG+ ++L EL I+GYPPEDL+ + SF + Sbjct: 1 MAIAQLNLTVGDLKGNCAKILEYAHKAAAQGVRILLTPELSITGYPPEDLLLRPSFQRQT 60 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +A + L+ + +VVG P + + N+ +L G ++ + K +LPN F E+ Sbjct: 61 DTAFEHLRQELAALDLYVVVGHPVSREGELFNAASVLYKGQVVGMYHKHDLPNREVFDEQ 120 Query: 127 RTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 R F N P+VF IR G+ ICED W N + GAE L NASPY+ K Sbjct: 121 RYFTP--DNRPLVFEVDGIRFGLNICEDTW-NRYAPEAAAAAGAEVLLVPNASPYHMGKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R +V ++ + I+Y N +GGQDEL+FDGASF DG+Q +A ++ F E M + Sbjct: 178 TIRQSMVAKRVQETGMAIVYANMLGGQDELVFDGASFAMDGKQHVAMRLPQFQEALAMLD 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +++ A +P E A Y A + + DYV KN F IIGLSGG+ Sbjct: 238 -----AVARPGEPIVLEAHQPCVPELELTAQVYEALKMGVHDYVTKNRFPGAIIGLSGGV 292 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSA+ AIAVDALG + V+ +M+P YT+ SL+D+ + LG +YD + I D +N F Sbjct: 293 DSAITLAIAVDALGADKVRAVMMPSPYTADISLDDSRDMVRRLGIQYDEISIQDCMNAFD 352 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ + + EN+Q+RIRG +LMA+SN + ++LTT NKSE++ GY TLYGDM+ Sbjct: 353 SSLAPLFKGLAADTTEENLQARIRGTMLMAISNKTGRIVLTTGNKSEMATGYCTLYGDMA 412 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF +KD++KT V+QL +RNS L+EVIP I+ + PSAELRP Q DQ+SL Sbjct: 413 GGFAVIKDIFKTLVYQLCEYRNS---------LSEVIPTRIITRPPSAELRPDQVDQDSL 463 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD I+ R +E +ES N + E V LL +EYKRRQAPVG ++T ++ Sbjct: 464 PPYDVLDAILARYMEKDESVENIVASGFQKEDVFKAVKLLRINEYKRRQAPVGIRVTHRA 523 Query: 543 FGRDRLYPISNKFRD 557 FGRD YPI++KF D Sbjct: 524 FGRDWRYPITSKFND 538 >gi|325121187|gb|ADY80710.1| putative glutamine-dependent NAD(+) synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 541 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/557 (42%), Positives = 327/557 (58%), Gaps = 27/557 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQVNQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L ++ D +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQL-AEVKD--IVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTALVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRIQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDI 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 ++ E+ D +L Y +SA P E A+ Y V++ RDYV+++ F VI+GL Sbjct: 237 YIAEFDRDTKL----YKVTESA-----PALETFAEIYQGLVMATRDYVERSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGAEKVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L T NKSE+SVGY TLY Sbjct: 348 NSFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLATGNKSELSVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLP Y +LD I+ + EE D + ++ E V V L+ +EYKRRQ +G Sbjct: 461 QDSLPAYDVLDAILYAYI--EEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISN 553 +IT+++F R+R YPI N Sbjct: 519 RITSRAFSRERRYPIVN 535 >gi|319793214|ref|YP_004154854.1| NAD+ synthetase [Variovorax paradoxus EPS] gi|315595677|gb|ADU36743.1| NAD+ synthetase [Variovorax paradoxus EPS] Length = 565 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 236/564 (41%), Positives = 324/564 (57%), Gaps = 19/564 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+AIAQLN VVGD+ GN K A E++ QG L+L EL I+GY EDL + +F + Sbjct: 3 LKLAIAQLNFVVGDVDGNARKIVDAARESHAQGARLLLTPELSIAGYAAEDLFLRPAFTE 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFP-----RQDQEGVL---NSVVILDAGNIIAVRDKI 115 AC A+ + + D +VVG P R V N+ ++ G I+ K Sbjct: 63 ACDDAVKGIAAALADLKDMVVVVGHPTGGSLRSRSVAVQMRHNAASVIKEGRILDTYAKR 122 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 LPNY F E+R F G + +G+LICED W + + + GAE L +N Sbjct: 123 ELPNYQVFDERRYFTPGQGTCVFEAGGVSVGLLICEDAWFDQP-AELARAAGAEVLAVIN 181 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASPY+ K +R + + V LP++Y + VGGQDE++FDGASF LA Q++ Sbjct: 182 ASPYHVGKEGERVARMADRAHAVGLPLVYAHLVGGQDEVVFDGASFALQAGGALAMQVES 241 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F E+ + + ++ + A + P E ++A VL +RDY+ KN F Sbjct: 242 FQEKLVFAQLERTPE-GGVGFVVEPGA--VAAPRDAEAQLWDALVLGVRDYIGKNGFPSA 298 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+GLSGGIDSAL AIAVDALGK+ V+ +M+P YT+ S DA A LG +YD + I Sbjct: 299 ILGLSGGIDSALVLAIAVDALGKDKVRAVMMPSPYTADISWIDAREMANRLGVRYDEISI 358 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 F +++ ++ P ENIQ+RIRG +LMALSN +++LTT NKSE++ GY Sbjct: 359 KHTFESFKGALAEEFKDRPEDTAEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMATGY 418 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAELR 474 TLYGDM+GGF +KDL KT VF LA WRN+H +G P IP I+ + PSAELR Sbjct: 419 CTLYGDMAGGFAVIKDLLKTTVFALARWRNAHDPYGTGAAP----IPDRIITRPPSAELR 474 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 P QTDQ+SLPPY ILD I+ R ++++E Y V V L+ +EYKRRQAP Sbjct: 475 PDQTDQDSLPPYDILDGILARYMQDDEGIDEIIAAGYERAVVERVARLIKVNEYKRRQAP 534 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 VG ++T +SFG+D YPI++KF + Sbjct: 535 VGIRVTHRSFGKDWRYPITSKFNE 558 >gi|169830368|ref|YP_001716350.1| NAD+ synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169637212|gb|ACA58718.1| NAD+ synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 543 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 235/572 (41%), Positives = 336/572 (58%), Gaps = 52/572 (9%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ++IA+AQ+NP VGDI GN ++ RARE A DL++F EL + GYPP+DL+ + Sbjct: 1 MRIAVAQINPTVGDINGNTDLIVSATGRAREAA----ADLVVFPELAVCGYPPKDLLCRA 56 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ A + +D +++ T + ++VG P R D G+ N+ V+L + K LP Sbjct: 57 DFLDAVEAGLDRIRAATTE--IAVLVGAPVRGDDGGLFNAAVLLRDRRVAGRVAKTLLPE 114 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI----------CKHLKKQGAE 169 Y F E+R F G + P+ RD+RLG+ +CEDIW + K L +G + Sbjct: 115 YDVFDERRYFAPGAAQPPLTLRDLRLGVTVCEDIWNIGGVTGIPPYPVDPVKELADRGVD 174 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 +L+ASPY+ K ++R E+V + P++YVNQ+GG D+L+FDGASF D + ++ Sbjct: 175 LFINLSASPYHLRKQRQRLEVVGAVAARYSRPVLYVNQIGGNDDLVFDGASFLTDSRGRV 234 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 Q F ++ +H L ++ S++Y A VL L DY++K Sbjct: 235 VLQGLSFETDFWVFSFHDINTLPVLEAKPEEGPSSVY----------RALVLGLADYLRK 284 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F K ++GLSGGIDSA+ AA+AV ALG ENV + +P +Y+S SLEDA A+ LG + Sbjct: 285 TGFRKAVVGLSGGIDSAVTAALAVAALGAENVLGVSMPSRYSSRSSLEDARELARRLGIE 344 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSG-----IVAENIQSRIRGNILMALSNHSKAMLLT 404 + VLPI HF S + QF P G + ENIQ+R+RG ILM +SN ++L+ Sbjct: 345 FRVLPID---VHFQSFLDQF---NPDGRPRLDVAEENIQARLRGMILMFISNREGYLVLS 398 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGDM+GG L D+ KT V++LA+ N G EVIPPSI Sbjct: 399 TGNKSEMAVGYTTLYGDMAGGLAVLADVPKTMVYELAALVNREG---------EVIPPSI 449 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLY 523 + K+PSAELRP Q DQ+SLPPYP+LD I+K +E S Q Y + VR V ++ Sbjct: 450 IRKAPSAELRPGQVDQDSLPPYPVLDGILKAYIEEGCSVSQIVKQGYAEPVVRRVVAMVD 509 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +EYKRRQAP G K+T+K+FG R +PI+ ++ Sbjct: 510 RAEYKRRQAPPGLKVTSKAFGPGRRFPIAQRW 541 >gi|74316825|ref|YP_314565.1| NH(3)-dependent NAD(+) synthetase [Thiobacillus denitrificans ATCC 25259] gi|74056320|gb|AAZ96760.1| NAD+ synthase (glutamine-hydrolyzing) [Thiobacillus denitrificans ATCC 25259] Length = 537 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 239/555 (43%), Positives = 331/555 (59%), Gaps = 27/555 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ N VGDIAGN AK A + A+ G L+L E+ I GYP EDLV ++ F Sbjct: 1 MKLALAQFNFTVGDIAGNAAKLLDAAQAAHAAGAALLLTPEMSICGYPAEDLVCRRDFTA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC++A+++L A ++VG+P + GV N+ +L G I V K +LPN+S F Sbjct: 61 ACAAAVESLARQAPAELA-LIVGYPERTAAGVYNAAALLRGGRIEQVYRKHHLPNHSVFD 119 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E+R F G +D VF IR GI IC DIW+ ++ GA++L LNASPY+ + Sbjct: 120 EQRVFCRG--DDACVFECAGIRFGINICGDIWEPGPATGAMEA-GADWLLVLNASPYHLS 176 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K + R + + LP++Y N VGGQDEL+FDGASF FD ++A Q + E F Sbjct: 177 KERDRIAVARARQIETRLPMVYANLVGGQDELVFDGASFVFDADGEVAVQCPAWREGLFY 236 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E D S +P EE A Y A VL++RDYV KN F V +GLSGG Sbjct: 237 LELDADGC----------SGPRHELP-GEEAAVYEALVLAVRDYVGKNGFRGVHLGLSGG 285 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL AIA DA+G E V +M+P YT+ S+ED+ + LG +Y + I +V F Sbjct: 286 IDSALTLAIAADAVGAERVHAVMMPSDYTAGISVEDSREIVERLGVRYAEIAIGPIVEAF 345 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ S EN+Q+R RG +LMALSN ++LTT NKSE+ GY TLYGDM Sbjct: 346 TGQLAGEFAGLASDTTEENLQARARGTLLMALSNKFGTLVLTTGNKSEMGTGYATLYGDM 405 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF LKD+ KT+V++LA++RNS ++ VIP I+++ PSAELRP QTDQ+S Sbjct: 406 AGGFAVLKDVAKTRVYRLANYRNS---------VSPVIPQRIIDRPPSAELRPDQTDQDS 456 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD I+ VE + Q ++ V+ V ++ +EYKRRQ+P G +IT + Sbjct: 457 LPPYEVLDAILAAYVERDLPAREIVAQGHDAAVVKKVIRMVDLAEYKRRQSPPGPRITPR 516 Query: 542 SFGRDRLYPISNKFR 556 +FG+DR YPI++K+R Sbjct: 517 NFGKDRRYPITSKYR 531 >gi|222111153|ref|YP_002553417.1| NAD(+) synthetase [Acidovorax ebreus TPSY] gi|221730597|gb|ACM33417.1| NAD+ synthetase [Acidovorax ebreus TPSY] Length = 554 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/565 (41%), Positives = 332/565 (58%), Gaps = 31/565 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQLN VVGD+ GN K A +A+ G L+L EL + GY EDL + +F+QAC Sbjct: 5 ISIAQLNFVVGDVPGNAQKILAAARDAHAAGARLLLTPELALCGYAAEDLYLRPAFVQAC 64 Query: 67 SSAIDTLKSDTHDG-GAGIVVGFPRQDQEGV--------LNSVVILDAGNIIAVRDKINL 117 A++ L + T D G +VVG PR+ GV N+ +L AG I K L Sbjct: 65 EQALEGLAAATADWPGLTVVVGHPRRVAHGVGEGGRGLCHNAASVLRAGRIEHTYAKQYL 124 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F E+R F+ G N +R+G+LICED W + ++ GA+ L +LNAS Sbjct: 125 PNYEVFDERRYFVPGDENCVFEVDGVRMGLLICEDAWY-PGPARSAREAGAQVLVTLNAS 183 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY+ K +R +++ ++ LP++Y + VGGQDE++F+G SF + +A + F Sbjct: 184 PYHLGKAVEREQVMRERVLETGLPLVYAHLVGGQDEVVFEGRSFALNADGSVAARAPGFE 243 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD----YNACVLSLRDYVQKNNFH 293 E+ + + Q +A + P+ E ++A VL +RDYV KN F Sbjct: 244 EKTLLIKVQQAQ-----------AAIVLEAPVAPHEGWEAELWSALVLGVRDYVGKNGFP 292 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 V++GLSGG+DSAL AIAVDALG + V+T+M+P YT+ S DA A LG +YD + Sbjct: 293 GVLLGLSGGMDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAGRLGVRYDEI 352 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I F + ++ P EN+Q+RIRG +LMALSN +++LTT NKSE++ Sbjct: 353 AIAPQFEAFKTALAPQFASLPEDTTEENLQARIRGMLLMALSNKFGSLVLTTGNKSELAT 412 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAE 472 GY TLYGDM+GGF +KD+ KT+VF LA WRN++ +G P IP I+ + PSAE Sbjct: 413 GYCTLYGDMAGGFAVIKDVVKTRVFALARWRNANDPYGTGANP----IPERIITRPPSAE 468 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQ 531 LRP Q DQ+SLPPY +LD I++R +EN+E + + + V V L+ +EYKRRQ Sbjct: 469 LRPDQKDQDSLPPYEVLDAIVERYMENDEPLEDIVRAGFERADVERVTRLIKLNEYKRRQ 528 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 APVG ++T +SFG+D YPI+N+FR Sbjct: 529 APVGVRVTRRSFGKDWRYPITNRFR 553 >gi|192362224|ref|YP_001983661.1| glutamine-dependent NAD+ synthetase signal peptide protein [Cellvibrio japonicus Ueda107] gi|190688389|gb|ACE86067.1| glutamine-dependent NAD+ synthetase signal peptide protein [Cellvibrio japonicus Ueda107] Length = 560 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/563 (40%), Positives = 334/563 (59%), Gaps = 34/563 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKA-RRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 + +L++ +AQ+N +VGDI GN AK ARE R +D I++ EL ++GYPPEDL+ + Sbjct: 21 MSQLQLVLAQINTLVGDIPGNTAKVLASAREVLERGPVDAIIYPELTLTGYPPEDLLLRP 80 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A+D L +VVG+PR+ + + N ++ AG ++A K LPNY Sbjct: 81 SLDGRIQRALDELLDARLP--TTLVVGYPRRRGDKLYNMAGVIQAGKLVAEYAKQCLPNY 138 Query: 121 SEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 F EKR F++G + P +F D+ + +CEDIW + + + GA + +LNAS Sbjct: 139 QVFDEKRYFVAG--DQPCLF-DLCGQPTALTVCEDIWHPEPMAQA-RAAGARLMLNLNAS 194 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY+ K ++R ++ + +P++YVN VGGQDEL+FDG S D Q +++ +S Sbjct: 195 PYHQGKQQEREAMIAERAREGKMPVVYVNLVGGQDELVFDGGSVVVDAQGTTRYRVPAYS 254 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVI 296 E N+ Q + + ++ +P+ E A Y VL L DYV KN F+ V+ Sbjct: 255 EGNYRL---------QLDLATGHCDPSLLVPVPERLSAVYQTLVLGLCDYVTKNRFNGVV 305 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AIAVDALG + V+ +M+P++YTS S DAA A LG +Y + I Sbjct: 306 LGLSGGIDSALTLAIAVDALGADKVEAVMMPFRYTSDLSKNDAADEAARLGVRYGSISIE 365 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + F + ++ EN+Q+R RG +LMA+SN ++LTT NKSE++VGY Sbjct: 366 PMYEAFMAALADEFAGTRRDTTEENLQARCRGVVLMAISNKKGYLVLTTGNKSEMAVGYS 425 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF+ LKD+ KT VF+LA +RN+ G EVIP +++ + PSAEL P Sbjct: 426 TLYGDMAGGFDVLKDVPKTLVFELARYRNTLG---------EVIPETVITRPPSAELAPD 476 Query: 477 QTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 Q D++SLPPY ILD I+ VE + E+ I + + E V V L+ +EYKRRQAP Sbjct: 477 QKDEDSLPPYEILDQILALYVEQDQSAEAIIA--RGFTREQVERVVRLVDINEYKRRQAP 534 Query: 534 VGTKITAKSFGRDRLYPISNKFR 556 +G +I+ + FGRDR YPI++ ++ Sbjct: 535 IGVRISQRGFGRDRRYPITSGWQ 557 >gi|262373253|ref|ZP_06066532.1| NAD synthase [Acinetobacter junii SH205] gi|262313278|gb|EEY94363.1| NAD synthase [Acinetobacter junii SH205] Length = 541 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 231/555 (41%), Positives = 328/555 (59%), Gaps = 23/555 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G+I N K A +Q DLI+F EL GYP EDL+ + + Sbjct: 1 MKNFKIALAQFSPHIGNIDANTQKMVEQANLAKQQQADLIIFPELSTIGYPAEDLLIRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPNY 120 + A L S+ D +V GF Q ++G NS ++ G ++ + +K NLPNY Sbjct: 61 LSKRTQKAFAQL-SEVKD--IVMVFGFVHQTEDGYRYNSAAVMKDGQVLGIYNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICED+W + N K L + E LNASPY Sbjct: 118 GVFDEKRYFQEGHQHLIFEYLGHKFGVLICEDVW-SLNTVKQLSQLNVETALVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + + ++L ++YVNQVGGQD+LIFDG+SF + ++A Q F E Sbjct: 177 VGKPQHRIQTLNELAKQLNLNLVYVNQVGGQDDLIFDGSSFVTNKNGEIALQAPSFQESI 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 + E+ +Q+ + +SA P E A+ Y A V++ RDYVQ++ F VI+GL Sbjct: 237 YFVEYDAEQK----EFKKTESA-----PALETFAEIYQALVMATRDYVQRSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G + VQ +M+PY YTS S+EDA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGADKVQAVMMPYTYTSQMSVEDATEQARRMGVTFGIAEIHPIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L+T NKSEISVGY TLY Sbjct: 348 NSFMQTLYPFFGNTPADATEENLQARTRGTLLMGLSNKFGNLVLSTGNKSEISVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF+ LKD+YKT VF+LA +RN+ T VIP ++ + PSAELRP QTD Sbjct: 408 GDMVGGFSVLKDVYKTIVFELAKYRNTLSETP-------VIPERVISRPPSAELRPDQTD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y +LD I+ +E ++S + + + E V V L+ +EYKRRQ +G +I Sbjct: 461 QDSLPAYDVLDAILYAYIEEDQSQADIIARGFEAEVVEKVIRLVDRNEYKRRQGAIGPRI 520 Query: 539 TAKSFGRDRLYPISN 553 ++++F R+R YPI N Sbjct: 521 SSRAFSRERRYPIVN 535 >gi|254785219|ref|YP_003072647.1| glutamine-dependent NAD+ synthetase [Teredinibacter turnerae T7901] gi|237686319|gb|ACR13583.1| glutamine-dependent NAD+ synthetase [Teredinibacter turnerae T7901] Length = 542 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 227/562 (40%), Positives = 332/562 (59%), Gaps = 32/562 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANR-QGMDLILFTELFISGYPPEDLVFKK 60 + L IA+AQ+NP+VGDI GN K R ++ R Q D+++F EL ++GYPPEDL+ + Sbjct: 1 MTTLNIAMAQINPLVGDIDGNAKKILRVAQQLEREQHADIVVFPELTLTGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S + A++ L + + +V+G+P+ + N ++ G +I K LPNY Sbjct: 61 SCDRRVERALNWLCDQSL--ASYVVIGYPKTIAGRMYNMAGVICGGRVICEYAKQALPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + + + +G+ ICEDIW I + + +GA+ L +LN SP+ Sbjct: 119 QVFDEKRYFSEGQESVTFDCKGVPVGLTICEDIWDGGPILRA-RAKGADLLLNLNGSPFD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R +V + S + +P++YVNQVGGQDEL+FDG SFC + ++ F E + Sbjct: 178 AEKHAERERLVAARASEIGIPVVYVNQVGGQDELVFDGGSFCANPGGEILRMAPMFREHS 237 Query: 241 FMTEWHYDQ----QLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 + ++ + +S + DD PL Y+A VL ++DYV KN F V+ Sbjct: 238 AVVAFNAQEGTLAPVSNLQTLDDD-------PLA---VTYDALVLGVKDYVNKNGFKGVV 287 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AIAVDALG + V +M+P++YTS S DA A+ LG Y + I Sbjct: 288 LGLSGGIDSALTLAIAVDALGADRVNAVMMPFRYTSDMSKTDAEEEARRLGVSYQSISIE 347 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + F + ++ ENIQ+R RG +LMA+SN ++LTT NKSE++VGY Sbjct: 348 PMYDAFSAQLAGAFANTQRDTTEENIQARSRGVLLMAISNKLGYLVLTTGNKSEMAVGYA 407 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GG + LKD+ KT VF L+ +RN+ ++ VIP S++ + PSAEL P Sbjct: 408 TLYGDMAGGLDVLKDVPKTLVFALSRYRNT---------VSAVIPESVITRPPSAELAPD 458 Query: 477 QTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 Q D++SLPPY ILD I+ VE + E+ I + YN + V V L+ +EYKRRQAP Sbjct: 459 QKDEDSLPPYEILDAILAMYVEQDLSAEAII--EAGYNRDDVMRVIRLIDINEYKRRQAP 516 Query: 534 VGTKITAKSFGRDRLYPISNKF 555 VG +I+A++FGRDR YPI+N + Sbjct: 517 VGIRISARAFGRDRRYPITNGW 538 >gi|262280051|ref|ZP_06057836.1| glutamine-dependent NAD+ synthetase [Acinetobacter calcoaceticus RUH2202] gi|262260402|gb|EEY79135.1| glutamine-dependent NAD+ synthetase [Acinetobacter calcoaceticus RUH2202] Length = 541 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 232/557 (41%), Positives = 328/557 (58%), Gaps = 27/557 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTKKMIEQVNQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L ++ D +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQL-AEVKD--IVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LNASPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRTQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNKNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 ++ E+ + + ++ +SA P E A+ Y V++ RDYV+++ F VI+GL Sbjct: 237 YIAEFDHKNK----SFKVTESA-----PALETFAEIYQGLVMATRDYVERSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGAEKVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSVV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L T NKSE+SVGY TLY Sbjct: 348 NSFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLATGNKSELSVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLP Y +LD I+ + EE D + ++ E V V L+ +EYKRRQ +G Sbjct: 461 QDSLPAYDVLDAILYAYI--EEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISN 553 +IT+++F R+R YPI N Sbjct: 519 RITSRAFSRERRYPIIN 535 >gi|261856576|ref|YP_003263859.1| NAD+ synthetase [Halothiobacillus neapolitanus c2] gi|261837045|gb|ACX96812.1| NAD+ synthetase [Halothiobacillus neapolitanus c2] Length = 561 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 234/566 (41%), Positives = 329/566 (58%), Gaps = 35/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ++IA+AQ++ VG+ N I RAR+E + +++F EL ++GYPPEDL+ + Sbjct: 12 VRIALAQVSTQVGNCIANADRVIETIARARQELQAR---VVVFPELTLTGYPPEDLLLRH 68 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ---------DQEGVL-NSVVILDAGNIIA 110 F+ C + I+ + + HD +++G PR+ D L N+ +++D G I+A Sbjct: 69 DFLAQCDAQIERIAAAAHD--MAVIIGAPRRMNGDTHQPGDAPAALENAAIVIDRGQIVA 126 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K LPNY F EKR F G + + LGI ICEDIW+ S + GA+ Sbjct: 127 HYAKRALPNYGVFDEKRYFKKGREACVVEIDGVPLGITICEDIWE-SRPAEEAAAAGAKV 185 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +LNASPY+ +K +R +V+ ++ PIIYVN VGGQDEL+FDG SF D Q+ Sbjct: 186 ILTLNASPYHRHKTDERARVVSQRVRETGCPIIYVNLVGGQDELVFDGRSFVAD-HSQIV 244 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 ++ F E + D +++ + + P EEE Y+A +RDYV+KN Sbjct: 245 SKLPAFKESLGWVDVFPDGRITA-------HGESHHWPHGEEEV-YSALTAGIRDYVRKN 296 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 FH +++GLSGGIDSAL +AVDALG ENV + +P +YTSP SL DAA +G Sbjct: 297 GFHGIVLGLSGGIDSALVLTLAVDALGAENVLAVRMPSRYTSPMSLTDAAEQCAHMGVAM 356 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + L I + N S +S EN+Q+R RG +LMALSN MLLTT NKSE Sbjct: 357 ETLSIEPVFNELKSSLSPLFAGLAEDATEENLQARTRGVLLMALSNKFGRMLLTTGNKSE 416 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM+GGF P+KD+ K V+ LA WRN+H +G P IP ++E+ PS Sbjct: 417 LAVGYATLYGDMAGGFAPIKDVPKMLVYALARWRNTH--KTGEHP---PIPTRVIEREPS 471 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKR 529 AELR Q D +SLPPY +LD II VE ++S + DE VR + L+ +EYKR Sbjct: 472 AELRADQRDADSLPPYELLDRIITAFVEEDQSIEDMVAAGLDEAIVRRITRLILLNEYKR 531 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKF 555 RQAP G +I+ ++FGRDR YPI++ F Sbjct: 532 RQAPPGIRISRRAFGRDRRYPITSGF 557 >gi|121594129|ref|YP_986025.1| NAD+ synthetase [Acidovorax sp. JS42] gi|120606209|gb|ABM41949.1| NAD+ synthetase [Acidovorax sp. JS42] Length = 554 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 233/565 (41%), Positives = 331/565 (58%), Gaps = 31/565 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQ N VVGD+ GN K A +A+ G L+L EL + GY EDL + +F+QAC Sbjct: 5 ISIAQRNFVVGDVPGNAQKILAAARDAHAAGARLLLTPELALCGYAAEDLYLRPAFVQAC 64 Query: 67 SSAIDTLKSDTHDG-GAGIVVGFPRQDQEGVL--------NSVVILDAGNIIAVRDKINL 117 A++ L + T D G +VVG PR+ GV N+ +L AG I K L Sbjct: 65 EQALEGLAAATADWPGLTVVVGHPRRVAHGVGEGGRGLCHNAASVLRAGRIEHTYAKQYL 124 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F E+R F+ G N +R+G+LICED W + ++ GA+ L +LNAS Sbjct: 125 PNYEVFDERRYFVPGDENCVFEVEGVRMGLLICEDAWY-PGPARSAREAGAQVLVTLNAS 183 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY+ K +R +++ ++ LP++Y + VGGQDE++F+G SF + +A + F Sbjct: 184 PYHLGKAVEREQVMRERVQETGLPLVYAHLVGGQDEVVFEGRSFALNADGNVAARAPGFE 243 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD----YNACVLSLRDYVQKNNFH 293 E+ + + Q +A + P+ E ++A VL +RDYV KN F Sbjct: 244 EKTLLIKVQQAQ-----------AAIVLEAPVAPHEGWEAELWSALVLGVRDYVGKNGFP 292 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 V++GLSGG+DSAL AIAVDALG + V+T+M+P YT+ S DA A LG +YD + Sbjct: 293 GVLLGLSGGMDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAARLGVRYDEI 352 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I F + ++ P EN+Q+RIRG +LMALSN +++LTT NKSE++ Sbjct: 353 AIAPQFEAFKTALAPQFAGLPEDTTEENLQARIRGMLLMALSNKFGSLVLTTGNKSELAT 412 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAE 472 GY TLYGDM+GGF +KD+ KT+VF LA WRN++ +G P IP I+ + PSAE Sbjct: 413 GYCTLYGDMAGGFAVIKDVVKTRVFALARWRNANDPYGTGANP----IPERIITRPPSAE 468 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQ 531 LRP Q DQ+SLPPY +LD I++R +EN+E + + + V V L+ +EYKRRQ Sbjct: 469 LRPDQKDQDSLPPYEVLDAIVERYMENDEPLEDIVRAGFERADVERVTRLIKLNEYKRRQ 528 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 APVG ++T +SFG+D YPI+N+FR Sbjct: 529 APVGVRVTRRSFGKDWRYPITNRFR 553 >gi|326796307|ref|YP_004314127.1| NAD+ synthetase [Marinomonas mediterranea MMB-1] gi|326547071|gb|ADZ92291.1| NAD+ synthetase [Marinomonas mediterranea MMB-1] Length = 545 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 223/560 (39%), Positives = 332/560 (59%), Gaps = 20/560 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L++A+AQL+ +VGDI N +A EA + D+++F EL ++GYPPEDL+ + S Sbjct: 3 LRVAMAQLDMLVGDIKNNTESVIKAAHEARDHHQADVVVFPELTLTGYPPEDLLLRPSLD 62 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +I T+ ++ HD +VVG+PR+ + N + G ++ K LPN+ F Sbjct: 63 SRIEDSIQTILNEVHD--IYVVVGYPRRIDGDLFNCAGVFHQGRMLGEYAKQKLPNFKVF 120 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 +KR F G + +++++G+ ICEDIW + ++ GAE + +L+ASP++ K Sbjct: 121 DDKRYFEEGTEPLIVDVKNVKVGLSICEDIW-HPEPSLQAQEAGAELIINLSASPFHIEK 179 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 + R +++ + LPI++VN +G QDEL+++G SF + Q Q Q F + Sbjct: 180 MGVREQLLHQRAVETQLPIVFVNYMGAQDELVYEGGSFVVNAQGQKIAQAPWFESGIYTV 239 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++ ++ +Q AST+ L EE+ Y A VL LRDY++KN F +++GLSGGI Sbjct: 240 DFSVEETRTQKVI---PLASTVAPALSIEESVYQAMVLGLRDYIEKNRFKGIVLGLSGGI 296 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A+AVDA+G + VQ +M+PY YTS SLEDA A LG Y VLPI +V F Sbjct: 297 DSALSLAVAVDAIGADRVQAVMMPYTYTSSMSLEDAEEEATLLGVNYSVLPIEPMVTAFM 356 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 ++ + EN+Q+R RG LMA+SN M+LTT NKSE++VGY TLYGDM Sbjct: 357 ETLAPEFEGYAKDTTEENLQARTRGVTLMAISNKKGYMVLTTGNKSEMAVGYATLYGDMV 416 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GG++ LKD++KT VF+L +RN+ G VIP ++ + PSAEL P Q D++SL Sbjct: 417 GGYSVLKDVFKTLVFKLCRYRNTLGY---------VIPERVITRPPSAELAPDQIDEDSL 467 Query: 484 PPYPILDDIIKRIVENEES--FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 P Y LD+I+ +E + S I +++ ETV V L+ +EYKRRQAP G ++T + Sbjct: 468 PSYDELDEILHLYIERDMSAEAILEIGQFDRETVYRVLRLVDLNEYKRRQAPTGVRLTER 527 Query: 542 SFGRDRLYPISNKFRDHISE 561 FGRDR YPI+N + HI + Sbjct: 528 GFGRDRRYPITNGW--HIGD 545 >gi|319762455|ref|YP_004126392.1| nad+ synthetase [Alicycliphilus denitrificans BC] gi|317117016|gb|ADU99504.1| NAD+ synthetase [Alicycliphilus denitrificans BC] Length = 552 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 239/564 (42%), Positives = 332/564 (58%), Gaps = 27/564 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L I+IAQLN VVGD+ GN K A +A G L+L EL I GY EDL + +F+ Sbjct: 3 LAISIAQLNFVVGDLQGNAQKIIDAARQAYAAGARLLLTPELAICGYAAEDLFLRPAFLA 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQ------EGVLNSVVILDAGNIIAVRDKINL 117 AC A+ + T D G IV+G PR LN+ +L AG + K L Sbjct: 63 ACDEAVQAVARGTADLAGLAIVLGHPRAAAPGAPAFSSCLNAASVLRAGRVEQTYTKREL 122 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 PNY F E+R F++G + P VF +R+G+LICED W ++ + GA+ L +N Sbjct: 123 PNYQVFDERRYFVAG--DAPCVFEVEGVRVGLLICEDAWFSAP-ARDAATAGAQLLAVIN 179 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASP++ K +R + + +++ LP++Y + VGGQDE++F+G SF + +A + Sbjct: 180 ASPFHLGKGAEREQTMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALNADGTVAMRAPA 239 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHK 294 F E+ + H Q + M D A P + EAD ++A VL +RDYV KN F Sbjct: 240 FEEKLVFAQVHQAQAAIE---MEADVA-----PERSLEADLWDALVLGVRDYVGKNGFPG 291 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++GLSGGIDSAL AIAVDALG + V+T+M+P YT+ S DA A LG +YD + Sbjct: 292 ALLGLSGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAARLGVRYDEIA 351 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I F + ++ + EN+Q+RIRG +LMALSN A++LTT NKSE++ G Sbjct: 352 IAPQFEAFKAALAPLFEGRAEDTTEENLQARIRGTLLMALSNKFGAVVLTTGNKSEMATG 411 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAEL 473 Y TLYGDM+GGF +KD+ KT+VF LA WRN++ +G P IP I+ + PSAEL Sbjct: 412 YCTLYGDMAGGFAVIKDVVKTRVFDLARWRNANDPYGTGANP----IPERIIIRPPSAEL 467 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQA 532 RP Q DQ+SLPPY +LD I+ R +EN+E + + Y+ V V L+ +EYKRRQA Sbjct: 468 RPDQKDQDSLPPYEVLDAILARYMENDEPVEDIVRAGYDRADVERVTRLIKINEYKRRQA 527 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 PVG ++T +SFG+D YPI+NKFR Sbjct: 528 PVGVRVTRRSFGKDWRYPITNKFR 551 >gi|57234088|ref|YP_181837.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides ethenogenes 195] gi|57224536|gb|AAW39593.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides ethenogenes 195] Length = 566 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/576 (40%), Positives = 338/576 (58%), Gaps = 36/576 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A R +EA G D+I+F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIIRHIQEARSLGADVIVFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ ++D++ + G ++VG+ G+ NS I+ ++I KI LPNY Sbjct: 61 FVEGNLHSLDSVIKASE--GITVIVGY-VDSHNGLHNSAAIIHNASLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +R+G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFLPGNRCPVYTICGLRVGVNICEDIWFASGPSTAQSNKGAELIINISASPYHF 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSDRARENRVYIAYTNMVGGQDELVFDGASNVFDYTGNLVLRGKQFQEDLL 237 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYI------------------PLQEEEADYNACVLSL 283 + + L++ MS + ++++ PL + Y A +L Sbjct: 238 VLDLDI-PALTRQGDMSTEIPDSIFVSASGLSEPKLPFENSDSVPLDADAEVYQALLLGT 296 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 +DY+ KN F KV+IGLSGGIDS+L AAIA DALG +NV +++P +Y+S S+ D+ A Sbjct: 297 KDYINKNGFKKVVIGLSGGIDSSLVAAIATDALGADNVVGVIMPSRYSSAGSISDSLRLA 356 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + LG K +PI + F S +S+ + ENIQ+RIRGN+LMALSN ++L Sbjct: 357 ENLGIKTLQIPIDPIFKSFLSTLSEVFAGTETDTTEENIQARIRGNLLMALSNKFHWLVL 416 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TSNKSE ++GY TLYGDM+GGF +KD+ K V++LA RN ++G E+IP + Sbjct: 417 NTSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLAHNRNK---SAGF----ELIPHN 469 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVE 519 +L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S DQ + + V+ V Sbjct: 470 VLTKPPSAELKPNQLDTDSLPPYELLDPILEAYVEQDKSI---DQIVALGFEESIVKRVV 526 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 527 KMVDRSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|224826930|ref|ZP_03700029.1| NAD+ synthetase [Lutiella nitroferrum 2002] gi|224600917|gb|EEG07101.1| NAD+ synthetase [Lutiella nitroferrum 2002] Length = 530 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 228/554 (41%), Positives = 328/554 (59%), Gaps = 28/554 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ NPVVGDIAGN K +A QG D+++ EL ++GY PEDL+ + F + Sbjct: 1 MRIALAQFNPVVGDIAGNTRKILDLARQAMAQGADVLVTPELALTGYSPEDLLLRDHFYR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 CS A+D L G +VVG P + N+ ++ GN + K+ LPN F Sbjct: 61 ECSKALDEL---LELDGITLVVGHPVKLGNERFNAATVMRDGNRLGQYHKMLLPNNEVFD 117 Query: 125 EKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E R F G + P+VF + +G+LICED+W + + GA+ + LNASP++ N Sbjct: 118 ECRYFTPGGA--PLVFPQDGVNVGVLICEDVW-SLDPAAEAADAGADVVVVLNASPFHRN 174 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K++ RHE V ++ LP YVN GGQDEL+FDGASF + ++ Q + ++ + Sbjct: 175 KIETRHETVRYRVEETGLPFAYVNLTGGQDELVFDGASFALNKAGEVVAQAAAYDDELLI 234 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 Q++ + + +T+ PL E+ Y V+ +RDY+ KN F V++GLSGG Sbjct: 235 V------QMADGD-LQPAGKATLPCPL---ESVYRTLVIGVRDYIGKNGFPGVLLGLSGG 284 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL AIA DALG + V +M+P +YT+ S++D+ + LG KY+ + I + F Sbjct: 285 IDSALTLAIAYDALGADKVHAVMMPSRYTADISVDDSRDMVERLGVKYEEIAIWPMYESF 344 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + ++ + EN+Q+RIRG +LMALSN + ++LTT NKSE++ GY TLYGDM Sbjct: 345 MAALAPSFEGLAEDTTEENLQARIRGTLLMALSNKTGKLVLTTGNKSEMTTGYCTLYGDM 404 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF LKD+ KT V+QL WRN+ +E+IP I+ + PSAELRP Q DQ+S Sbjct: 405 AGGFAVLKDVAKTLVYQLCHWRNAQ---------SEIIPLRIITRPPSAELRPDQKDQDS 455 Query: 483 LPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD I+ R VE S E + + VR V LL +EYKRRQAPVG ++T + Sbjct: 456 LPPYDVLDAIMARYVEENLSAAEIIAEGFAEADVRRVVRLLKINEYKRRQAPVGPRVTHR 515 Query: 542 SFGRDRLYPISNKF 555 FG+D YPI+N+F Sbjct: 516 GFGKDWRYPITNRF 529 >gi|257454474|ref|ZP_05619734.1| glutamine-dependent NAD(+) synthetase [Enhydrobacter aerosaccus SK60] gi|257448132|gb|EEV23115.1| glutamine-dependent NAD(+) synthetase [Enhydrobacter aerosaccus SK60] Length = 614 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 224/552 (40%), Positives = 328/552 (59%), Gaps = 15/552 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKIA+AQ +VGD+ N K ++A +G ++I+F EL + GYPPEDL+ + S Sbjct: 70 LKIAVAQQQFIVGDVINNAKKMVELAKDARDKGANIIVFPELSLLGYPPEDLLLRPSLAS 129 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + L + ++VG+P D G NSV I+ G K LPNY F Sbjct: 130 RVKLAFELLYTVKD---IVMLVGYPHIDPNGTFNSVAIIHNGQQKGFYHKQCLPNYGVFD 186 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F +G++ ++ + +G+LICED+W+++ I + LK++GAE + SLNASP+ NK Sbjct: 187 ERRYFNTGHNQVLFDYQGLTIGLLICEDLWQDAPI-RALKEKGAEIIISLNASPFEQNKQ 245 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R ++ + + ++PI+Y N VGGQD+L+FDG S + Q ++ + F + Sbjct: 246 EQRKALLKSRATEHNIPIVYANSVGGQDDLVFDGGSMVVNAQGKIVQEAPRFLQHTLYVV 305 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 +D Q Q +S+ S + L + Y A V+ LRDYV + F V++GLSGGID Sbjct: 306 ARHDAQSGQV-ILSEQRKSPL--ALSQIAETYQALVVGLRDYVNHSGFKGVLVGLSGGID 362 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL IAVDALG + V +M+PY+YTS SL+DA A A L Y V PIH V Sbjct: 363 SALTLCIAVDALGADKVYAVMMPYEYTSQISLQDAQAQAHRLNVSYTVCPIHAAVEGMRH 422 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + ENIQ+R RG ILMALSN +++TT NKSE++VGY TLYGDM+G Sbjct: 423 TLEPMFSNTTADTTEENIQARARGMILMALSNKFGHLVITTGNKSEMAVGYATLYGDMAG 482 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF+ LKD+YKTQV+ LA++RN T VIP ++ + PSAELRP Q DQ+SLP Sbjct: 483 GFDVLKDVYKTQVYALANYRNRL-------EETPVIPERVITRPPSAELRPDQKDQDSLP 535 Query: 485 PYPILDDIIKRIVENEESF-INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y LD +++ ++ + + + Y+ + V+ V ++ +EYKRRQA +GTKIT ++F Sbjct: 536 DYDTLDKMLELYIDRDFGYDAIVEAGYDKDVVKKVLSMVDRNEYKRRQAAIGTKITHRAF 595 Query: 544 GRDRLYPISNKF 555 GR+R YP+ N + Sbjct: 596 GRERRYPLVNHW 607 >gi|299771316|ref|YP_003733342.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter sp. DR1] gi|298701404|gb|ADI91969.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter sp. DR1] Length = 541 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 232/555 (41%), Positives = 326/555 (58%), Gaps = 23/555 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTKKMIEQVNQAKKQNADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L ++ D +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQL-AEVKD--IVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LNASPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + +A Q F E Sbjct: 177 VGKPQHRTQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNKDGGIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 ++ E+ + + +SA P E A+ Y VL+ RDYV+++ F VI+GL Sbjct: 237 YIAEFDPKNKA----FKVTESA-----PALETFAEIYQGLVLATRDYVERSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAVDAIGAEKVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSVV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L T NKSE+SVGY TLY Sbjct: 348 NSFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLATGNKSELSVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y +LD I+ +E + S + + ++ E V V L+ +EYKRRQ +G +I Sbjct: 461 QDSLPAYDVLDAILYAYIEEDLSQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRI 520 Query: 539 TAKSFGRDRLYPISN 553 T+++F R+R YPI N Sbjct: 521 TSRAFSRERRYPIVN 535 >gi|126666675|ref|ZP_01737652.1| NAD synthase [Marinobacter sp. ELB17] gi|126628720|gb|EAZ99340.1| NAD synthase [Marinobacter sp. ELB17] Length = 554 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 218/561 (38%), Positives = 333/561 (59%), Gaps = 29/561 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 L++ + Q + +VGDI GN + A +A+ Q D+++F EL ++GYPPEDL+ + S Sbjct: 17 LRLVMVQQDFLVGDIPGNAQRIVAAVRQADDQHQADIVVFPELALTGYPPEDLLLRPSLD 76 Query: 64 QACSSAIDTLKSDTHDGGAG----IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +AID + GAG +V G P ++ + N+ ++++ G I K PN Sbjct: 77 IRVQAAIDEI------CGAGLAPVVVFGAPVRENGKLYNAALVMENGKISHRYFKQCPPN 130 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F EKR F SG+ + + R + +GI +CED+W + + GA+ + +LNASPY Sbjct: 131 YQVFDEKRYFASGFESSVVSLRGVNVGITVCEDLWAEGPV-ETAAAAGAKLVLNLNASPY 189 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K +R +V + +PI+YVN VG QDEL+FDG S DG+ ++A + F + Sbjct: 190 SKGKQLRRKALVQRKAKAAGVPIVYVNLVGAQDELVFDGGSLVADGKGEIAAEAPQFEQG 249 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 F+ ++ + + + PL A Y A V+ +RDYV KN F V++GL Sbjct: 250 LFVVDFKCGE-------ICQPVTQPLPQPLSASAAVYQALVMGVRDYVGKNGFKSVVLGL 302 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALGK V+ +M+P++YTS SL+DA A A +G YDV I + Sbjct: 303 SGGIDSALTLAIAVDALGKAQVRAVMMPFRYTSDISLQDAEAQASTMGVHYDVFSIEPMY 362 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + F + +++ EN+Q+R+RG +LM+LSN +++LTT NKSE++VGY TLY Sbjct: 363 DTFMATLAEPFTGTTVDTTEENLQARLRGVLLMSLSNKFGSLVLTTGNKSEMAVGYSTLY 422 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF+ LKD+ KTQVF+L+ +RN+ + VIP ++ + PSAEL P Q D Sbjct: 423 GDMAGGFDVLKDVAKTQVFELSRYRNT---------VAPVIPERVITRPPSAELAPDQKD 473 Query: 480 QESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +++LP Y +LD I++R VE +ES + ++ V V L+ +EYKRRQAP+G ++ Sbjct: 474 EDNLPGYDVLDAILQRYVEQDESAEVIIAAGFDRTDVERVIRLVDINEYKRRQAPIGVRV 533 Query: 539 TAKSFGRDRLYPISNKFRDHI 559 + + FG+DR YPI+N ++ + Sbjct: 534 SERGFGKDRRYPITNGWKSGV 554 >gi|326570757|gb|EGE20782.1| NAD+ synthetase [Moraxella catarrhalis BC1] gi|326573020|gb|EGE22996.1| NAD+ synthetase [Moraxella catarrhalis CO72] gi|326573542|gb|EGE23505.1| NAD+ synthetase [Moraxella catarrhalis 101P30B1] Length = 563 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/553 (41%), Positives = 320/553 (57%), Gaps = 19/553 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEIE---GIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + I + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIWHDEPI-QALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +D Q + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 --RFDTQNKTF-----DTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILSMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKF 555 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGW 559 >gi|326564236|gb|EGE14470.1| NAD+ synthetase [Moraxella catarrhalis 46P47B1] Length = 563 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/553 (41%), Positives = 320/553 (57%), Gaps = 19/553 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEIE---GIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + I + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIWHDEPI-QALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +D Q + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 --RFDTQNKTF-----DTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKF 555 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGW 559 >gi|34497071|ref|NP_901286.1| NAD synthetase [Chromobacterium violaceum ATCC 12472] gi|34102928|gb|AAQ59292.1| glutamine-dependent NAD+ synthetase signal peptide protein [Chromobacterium violaceum ATCC 12472] Length = 530 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 225/554 (40%), Positives = 327/554 (59%), Gaps = 28/554 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ NPVVGDI GN K A QG D++L EL ++GY PEDL+ + SF + Sbjct: 1 MRIALAQFNPVVGDIVGNAQKIVDLANAALAQGADILLTPELALTGYSPEDLLLRDSFYR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +D ++ G ++VG P + N+ +L GN + K+ LPNY F Sbjct: 61 EVARGLDIIE---QLDGITVIVGHPARIGNERFNAATVLRDGNRLGQYHKMLLPNYEVFD 117 Query: 125 EKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E R F G + P+VF +++G+LICED W+ + AE L SLNASP++ + Sbjct: 118 ECRYFTPGAA--PLVFEQNGVKVGVLICEDAWQLEPAAEAADAG-AELLLSLNASPFHRD 174 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K++ RH+++ ++ LP+ Y N VGGQDEL+FDG SF D +A Q + ++ + Sbjct: 175 KIETRHQVMRYRVEETGLPLAYANLVGGQDELVFDGGSFALDKAGNVAAQAAAYDDELLL 234 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++ Y ++ A+ +P +E Y A V+ +RDY+ KN F ++GLSGG Sbjct: 235 VDFAYG------DFQPGRQAA---LPGAQESV-YRALVVGVRDYIGKNGFPGALLGLSGG 284 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL A+AVDALG + V +M+P +YT+ S+ D+ LG KYD + I + F Sbjct: 285 IDSALTLAVAVDALGADKVHAVMMPSRYTADISVTDSRDMIGRLGVKYDEIEIWPMYESF 344 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + ++ EN+Q+RIRG +LMALSN S ++LTT NKSE++ GY TLYGDM Sbjct: 345 MAALAPSFAGLEMDTTEENLQARIRGTLLMALSNKSGKLVLTTGNKSEMTTGYCTLYGDM 404 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF LKD+ KT VF+L WRN+ ++++IP I+ + PSAELRP Q DQ+S Sbjct: 405 AGGFAVLKDVAKTLVFELCRWRNT---------VSDIIPERIITRPPSAELRPDQKDQDS 455 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD I+ R VE+ +S + + + V V LL +EYKRRQAPVG ++T + Sbjct: 456 LPPYEVLDAIMARYVEDNQSAADIIAAGFAEADVNRVVRLLKINEYKRRQAPVGPRVTQR 515 Query: 542 SFGRDRLYPISNKF 555 FG+D YPI+NKF Sbjct: 516 GFGKDWRYPITNKF 529 >gi|84514343|ref|ZP_01001707.1| NAD(+) synthase [Loktanella vestfoldensis SKA53] gi|84511394|gb|EAQ07847.1| NAD(+) synthase [Loktanella vestfoldensis SKA53] Length = 553 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 239/559 (42%), Positives = 349/559 (62%), Gaps = 10/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP +GD+AGN A A +A E G DL++ E+F++GY +DLV K Sbjct: 1 MTRIFRLTMAQLNPTLGDLAGNAALAAQAWAEGKAAGADLVVLPEMFLTGYQTQDLVRKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ +S +D L DG + +G P + + + N V L G I A K LPN+ Sbjct: 61 AFVADAASRLDALARACADGPV-LGIGLPMVEDDNLYNCYVYLAGGKITARFRKHFLPNF 119 Query: 121 SEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + F E R F S + P+ R+G ICED W + ++C+ + + GA+ L N SPY Sbjct: 120 NVFDEVRLFNSAAISGPVTLAGGPRIGTPICEDAW-SPDVCETMVESGAQILVVPNGSPY 178 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + +K R + + ++ +P++Y+N +GGQD+ +FDG SF + +LA Q+ F Sbjct: 179 FRDKFPIRLQTMIARVVENDVPLVYLNMIGGQDDQMFDGGSFVLNRGGKLAVQLPVFDAA 238 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 +T H D Q + +++ D + +P + E DY A V +LRDY++K F KV++GL Sbjct: 239 --IT--HVDFQETDQGWVTLDGPKAL-LP-DDLEQDYRAMVEALRDYLRKTGFGKVLLGL 292 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ AAIAVDALG + V+ +MLP +YTS SL+DAAA A+ALGC+YD + I Sbjct: 293 SGGIDSAIVAAIAVDALGADQVRCVMLPSEYTSQASLDDAAAAARALGCRYDTVSIAGPR 352 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 ++ + P+ + ENIQSRIRG +LMA SN MLLTT NKSE++VGY T+Y Sbjct: 353 AAVTEALAPLFGDMPADLTEENIQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYATIY 412 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KD+YKT+VF + WRN+H GP +VIPP+I++K PSAELRP Q D Sbjct: 413 GDMAGGYNPIKDMYKTRVFDICRWRNAHHRDWMQGPAGQVIPPAIIDKPPSAELRPDQRD 472 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLPPY +LD I+ +V+ + S + Y+ TV+ +EHL+Y SEYKR QA G ++ Sbjct: 473 DDSLPPYDVLDGILAMLVDGDASVADCVAAGYDRATVKKIEHLVYISEYKRFQAAPGVRL 532 Query: 539 TAKSFGRDRLYPISNKFRD 557 + ++F DR YPI N++RD Sbjct: 533 SDRAFWLDRRYPIVNRWRD 551 >gi|326561328|gb|EGE11686.1| NAD+ synthetase [Moraxella catarrhalis 7169] Length = 563 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/553 (41%), Positives = 319/553 (57%), Gaps = 19/553 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEIE---GIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + I LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIWHDEPIYM-LKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +D Q + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 --RFDIQNKTF-----DTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGSDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKF 555 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGW 559 >gi|198282730|ref|YP_002219051.1| NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667784|ref|YP_002424924.1| glutamine-dependent NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247251|gb|ACH82844.1| NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519997|gb|ACK80583.1| glutamine-dependent NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 549 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/553 (42%), Positives = 327/553 (59%), Gaps = 20/553 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+N VGD+AGN + A EA G DL+L EL +SGYPPEDL+ + F+Q Sbjct: 1 MRIALAQVNCRVGDVAGNADRLLAAAAEAQAAGADLLLTPELALSGYPPEDLLLRSDFLQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C +A+ L + ++VG PR+ QE + NS +L G A K LPNY+ F Sbjct: 61 DCDAAMQRLAAAAP---LPMLVGHPRRVQEQLYNSAGLLRGGRAEAFYHKHCLPNYAVFD 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G + IR G+ ICED+W + + + QGAE L LNASPY+ NK Sbjct: 118 EVRYFTPGAQSLVFTCAGIRCGVAICEDVWCGPGVAQAAQAQGAELLLVLNASPYHLNKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + R + V + HLPI+YVN VGGQDEL+FDG SF D LA + +E + + Sbjct: 178 RVREDEVGALAARCHLPIVYVNLVGGQDELVFDGQSFAADRNGLLALRAARCAEALVLLD 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGI 303 D + A P+ +E A+ Y+ L + DYV+KN F ++GLSGG+ Sbjct: 238 VDRDDAGIRLQ------ADRPLQPVPDESAEVYDVLRLGVHDYVEKNGFPGAVLGLSGGV 291 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A+AVDALG E V +++P +YT+ S+ DA A A++LG + D++ I L + + Sbjct: 292 DSALTLAVAVDALGAERVHALIMPSRYTAEMSIADAVAEARSLGVRTDIVSIEGLFHSYL 351 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 ++ + EN+Q+RIR +LMA SN +LLTT NKSEI+VGY TLYGDM+ Sbjct: 352 ETLAPLFAGRAADTTEENLQARIRAALLMAYSNKFGHLLLTTGNKSEIAVGYATLYGDMA 411 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF +KD KT V++LA +RNS LGP VIP +L + PSAEL P Q DQ+SL Sbjct: 412 GGFAVIKDCPKTLVYRLARYRNS------LGP---VIPERVLTRPPSAELAPDQRDQDSL 462 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD II VE + S ++ + ETV V L+ +EYKRRQA G +I+A++ Sbjct: 463 PPYEVLDAIIAAYVEEDHSAVDLIAAGFPAETVMRVLRLIDRAEYKRRQAAPGVRISARA 522 Query: 543 FGRDRLYPISNKF 555 FG+DR YPI+N + Sbjct: 523 FGKDRRYPITNGY 535 >gi|289209199|ref|YP_003461265.1| NAD+ synthetase [Thioalkalivibrio sp. K90mix] gi|288944830|gb|ADC72529.1| NAD+ synthetase [Thioalkalivibrio sp. K90mix] Length = 564 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 226/569 (39%), Positives = 335/569 (58%), Gaps = 30/569 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L +A+AQ+NP+VG + N A E+A G ++F EL ++GYPPEDL+ + +F++ Sbjct: 7 LPLALAQINPIVGGLDTNRHLIEDAIEQARAAGARAVVFPELALTGYPPEDLLLRPAFLR 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A ++ + G +++G P ++G++N+ + L G IA K LPNYS F Sbjct: 67 AVEQSLAAITRSV--AGIDVILGAPVPTEKGLVNAALWLRDGREIARYAKQVLPNYSVFD 124 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F++G + R+G+ +CEDIW+ + AE + +LNASPY+ K Sbjct: 125 EQRYFVAGDQACVVELAGWRIGLTVCEDIWQAAPAAAAQAAG-AELILNLNASPYHRGKA 183 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R ++V +++ P++YVNQVGGQDEL+FDG SF D + ++ + + Sbjct: 184 EERLQVVGARVAETGCPVVYVNQVGGQDELVFDGRSFVHDAAHGARAVLPAWATGYALVQ 243 Query: 245 WHYD------QQLSQWNYMSDDS-ASTMYIPLQE-EEAD----YNACVLSLRDYVQKNNF 292 Q + ++S T+ P E +EAD Y A ++ +RDYV KN F Sbjct: 244 GRRGPSGIELQPRPETMHLSACGIRPTLTDPGPEPDEADARDLYQALMIGIRDYVAKNGF 303 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 V++GLSGGIDS L AA+AVDALG V +M+PY+YT+ S+EDA A A+ LG +Y Sbjct: 304 PGVLLGLSGGIDSGLTAALAVDALGPAAVTAVMMPYRYTASMSIEDAEAQARLLGIEYHE 363 Query: 353 LPIHDLVNHFFSLMSQFLQEEPS---GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + I +V F +S P+ + EN+QSR RG +LMALSN S +LL T NKS Sbjct: 364 IAIEPMVQDFLEGLSPAFDAMPAHAGDVTEENLQSRARGVLLMALSNRSGKLLLATGNKS 423 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GGF PLKD+ K V++LA WRN+ G IP ++E+ P Sbjct: 424 EMAVGYSTLYGDMNGGFAPLKDVSKQWVYRLARWRNTRGAA---------IPERVIERPP 474 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLYGSEY 527 SAEL P Q D +SLPPY +LD +++ VE E S I D ++ TV + L++ +EY Sbjct: 475 SAELAPDQKDADSLPPYEVLDAVLEAFVEQERSVEEIVADG-FDHATVERIARLVFRAEY 533 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKFR 556 KRRQAP G +++ ++FGRDR YPI++ +R Sbjct: 534 KRRQAPPGVRVSRRAFGRDRRYPITSGYR 562 >gi|296112564|ref|YP_003626502.1| NAD+ synthetase [Moraxella catarrhalis RH4] gi|295920258|gb|ADG60609.1| NAD+ synthetase [Moraxella catarrhalis RH4] gi|326571668|gb|EGE21683.1| NAD+ synthetase [Moraxella catarrhalis BC7] Length = 563 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/553 (41%), Positives = 319/553 (57%), Gaps = 19/553 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEIE---GIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + I LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIWHDEPIYM-LKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +D Q + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 --RFDTQNKTF-----DTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKF 555 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGW 559 >gi|326577687|gb|EGE27563.1| NAD+ synthetase [Moraxella catarrhalis O35E] Length = 563 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/553 (41%), Positives = 320/553 (57%), Gaps = 19/553 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEIE---GIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + I + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIWHDEPI-QALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +D Q + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 --RFDIQNKTF-----DTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKF 555 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGW 559 >gi|332528122|ref|ZP_08404153.1| NH(3)-dependent NAD(+) synthetase [Rubrivivax benzoatilyticus JA2] gi|332112693|gb|EGJ12486.1| NH(3)-dependent NAD(+) synthetase [Rubrivivax benzoatilyticus JA2] Length = 552 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 236/572 (41%), Positives = 337/572 (58%), Gaps = 41/572 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ N VVGD+AGN + A A QG L+L EL ++GYPPEDL+ + +F+Q Sbjct: 1 MKVALAQFNAVVGDLAGNSRRLEDAARRAYAQGARLVLAPELALTGYPPEDLLLRPAFMQ 60 Query: 65 ACSSAIDTLKSDTHDG-GAGIVVGFPRQ-DQEGVL-----------NSVVILDAGNIIAV 111 AC+ A+ L D G +VVG P Q + G L N+ +L G + A Sbjct: 61 ACADALAALADVLRDCEGLHLVVGHPHQFGERGDLRTKSVTVQQRYNAASLLAGGRVQAT 120 Query: 112 RDKINLPNYSEFHEKRTFISGYSND--PIVF--RDIRLGILICEDIWKNSNICKHLKKQG 167 K LPNY F E+R F SG P+VF +R G++ICED W + + + G Sbjct: 121 YCKRELPNYQVFDERRYFASGRDAGLPPLVFDCEGLRFGVVICEDAWFDEP-ARLARDAG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 A+ L LNASP++ K ++R + + V LP+++ + VGGQDE++FDGASF D Sbjct: 180 AQVLCVLNASPFHLGKAEERQARMAERARDVGLPLLFSHLVGGQDEVVFDGASFALDAAG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + F+E+ + ++ D + P + +A ++A V +RDY+ Sbjct: 240 EVRARAATFAEELLVVDFDADAR---------PVGPVAEAPDLDRQA-WDALVTGVRDYL 289 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 KN F IIGLSGGIDSAL A+AVDALG + V+ +M+P YT+ S DA A LG Sbjct: 290 GKNGFPGAIIGLSGGIDSALVLAVAVDALGADKVRAVMMPSPYTADISWIDARDMAARLG 349 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 +YD + I + + F + ++ EN+Q+RIRG +LMALSN + A++LTT N Sbjct: 350 VRYDEIDIAPMFDAFRTALAPQFAGLAEDTTEENLQARIRGTLLMALSNKTGAIVLTTGN 409 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++ GY TLYGDM+GGF +KD+ KT V++LA+WRN+ G EVIP I+ + Sbjct: 410 KSEMATGYCTLYGDMAGGFAVIKDVAKTLVYRLANWRNAQG--------AEVIPQRIITR 461 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYG 524 PSAELRP QTDQ+SLPPY +LD I+ R +E+++S + E D V V L+ Sbjct: 462 PPSAELRPDQTDQDSLPPYEVLDAILARYMEDDQSVEQIVAAGFERAD--VERVTRLIKI 519 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +EYKRRQAPVG +IT ++FGRD YPI+++FR Sbjct: 520 NEYKRRQAPVGIRITHRAFGRDWRYPITSRFR 551 >gi|326569726|gb|EGE19776.1| NAD+ synthetase [Moraxella catarrhalis BC8] Length = 563 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/553 (41%), Positives = 320/553 (57%), Gaps = 19/553 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEIE---GIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + I + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIWHDEPI-QALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +D Q + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 --RFDIQNKTF-----DTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYDTLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKF 555 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGW 559 >gi|149377768|ref|ZP_01895501.1| NAD synthase [Marinobacter algicola DG893] gi|149357940|gb|EDM46429.1| NAD synthase [Marinobacter algicola DG893] Length = 550 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 231/561 (41%), Positives = 337/561 (60%), Gaps = 33/561 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSF 62 KL++ +AQL+ +VGDI GN K A A ++ DL++F EL ++GYPPEDL+ + S Sbjct: 12 KLRVVMAQLDFLVGDIPGNTQKVIEATRRAEQEHQADLVVFPELCLTGYPPEDLLLRPSM 71 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + A++TL+ + H G A I+VG P ++ + N+ V ++ GNI K PNY Sbjct: 72 DVRVADALETLRGE-HLGPA-IIVGAPIREGALLYNAAVAIEQGNITGRYFKRFPPNYQV 129 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F +G + + + +GI ICEDIW + + GA + +LNASPY + Sbjct: 130 FDEKRYFANGVDTLVMDIKGVPVGITICEDIWSEGPV-EDAAAAGARLVVNLNASPYDID 188 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K +R +V + + I+YVN +GGQDEL+FDG S +D LA + FSE + Sbjct: 189 KQVRRKALVERKAFENRVSIVYVNLIGGQDELVFDGGSVVYDHSGVLAAEAPQFSEGLYP 248 Query: 243 TEW---HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ H+ Q + Q + P EE Y A VL +RDYV KN F V++GL Sbjct: 249 VDFVCEHHCQPIPQ---------PAIAEPSLEENV-YKALVLGVRDYVNKNGFKSVVLGL 298 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ AIA DALG + V+ +M+P++YTS S+EDA A A ALG +YDV I + Sbjct: 299 SGGIDSAVTLAIAADALGADRVRAVMMPFRYTSGMSIEDAEAEAVALGVQYDVFSIEPMY 358 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + F ++ + EN+Q+R+RG +LM+LSN +++LTT NKSE++VGY TLY Sbjct: 359 DAFMETLAAPFEGTKPDTTEENLQARLRGVLLMSLSNKFGSLVLTTGNKSEMAVGYSTLY 418 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF+ LKD+ KT VF+LA +RNS +++VIP ++ + PSAEL P Q D Sbjct: 419 GDMAGGFDVLKDVPKTLVFRLAWYRNS---------VSQVIPERVITRPPSAELAPDQKD 469 Query: 480 QESLPPYPILDDIIKRIVENEESFINND----QEYNDETVRYVEHLLYGSEYKRRQAPVG 535 ++SLP Y +LD I+ VE + ++ D Q ++ V V L+ +EYKRRQAP+G Sbjct: 470 EDSLPGYDVLDQILNLYVERD---LSADAIVAQGFDRADVDRVVRLVDINEYKRRQAPIG 526 Query: 536 TKITAKSFGRDRLYPISNKFR 556 +IT + FG+DR YPI+N ++ Sbjct: 527 VRITERGFGKDRRYPITNGWK 547 >gi|254441088|ref|ZP_05054581.1| NAD synthase family [Octadecabacter antarcticus 307] gi|198251166|gb|EDY75481.1| NAD synthase family [Octadecabacter antarcticus 307] Length = 556 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 229/562 (40%), Positives = 338/562 (60%), Gaps = 13/562 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGDI GN KAR A E+ G D+++ E+F+ GY P+DL+ K Sbjct: 1 MSDRFRLTMAQLNPTVGDITGNAEKARFAWEQGRAAGADMVMLPEMFLVGYQPQDLIMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++ ++ L +D DG + +G P ++ + + N+ +L G +I+ K LPN+ Sbjct: 61 AFEREVAAELERLAADCADGPM-LGIGGPFREGDKLHNAYFVLKNGRVISTTRKYFLPNF 119 Query: 121 SEFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + F E R F P + +R+G ICED W ++C+ + + GAE L N Sbjct: 120 NVFDEVRLFSRADMQGPFNTGEDAGPLRIGTPICEDAWY-PDVCEAMVESGAELLLVPNG 178 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R + ++ +P++Y+N VGGQD+ +FDG SF + LA QM F Sbjct: 179 SPYFRDKFSVRLNNMVARVIENDVPLVYLNMVGGQDDQVFDGGSFVLNRHGALAVQMPWF 238 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 + H D + ++++D ++ E DY A VL LRDY+ K F KV+ Sbjct: 239 EDAIA----HVDFVRTDAGWVAEDGDK--HLEPSAFETDYAAMVLGLRDYMDKTGFKKVL 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGG+DSA+ AAIA DALG +NV+ +M+P +YTS SL+DA A A ALG +YD++PI Sbjct: 293 LGLSGGVDSAIVAAIAADALGPDNVRCVMMPSEYTSDASLDDAKAAAAALGVRYDIVPIG 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + ++ + G+ ENIQSRIRG +LMA SN MLLTT NKSE++VGY Sbjct: 353 AVRAAVTETLAPLFADLDEGLTEENIQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYA 412 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDMSGG+NP+KDLYKT+VF + WRN + E+IP +I++K PSAELR Sbjct: 413 TIYGDMSGGYNPIKDLYKTRVFDICRWRNVNHRPWMKASAGEMIPVAIIDKPPSAELRDD 472 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D +SLP Y +LD I+ +V+++ S + Y V+ +EHLL+ SEYKR Q+ G Sbjct: 473 QKDSDSLPEYDVLDGILTMLVDDDASVADCVAVGYGRTVVKKIEHLLFISEYKRFQSAPG 532 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 +++ K+F DR YPI N++RD Sbjct: 533 PRLSMKAFWLDRRYPIVNRWRD 554 >gi|254284409|ref|ZP_04959377.1| NAD+ synthetase [gamma proteobacterium NOR51-B] gi|219680612|gb|EED36961.1| NAD+ synthetase [gamma proteobacterium NOR51-B] Length = 537 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 229/558 (41%), Positives = 329/558 (58%), Gaps = 27/558 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMD---LILFTELFISGYPPEDLVFKKS 61 +K+ +AQ+N +VGD GN + EA +D +++F EL + GYPPEDL+ + S Sbjct: 1 MKLCMAQINTMVGDYRGNTEQVLATCAEA--VAIDPEAIVVFPELTLCGYPPEDLLLRPS 58 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + ++ L + +++GFPR + + N+ +++ G IIA DK LPNY+ Sbjct: 59 VEDHVNECLERLCRELP-ASLWVILGFPRHREGRLFNTAAVINRGAIIAEYDKQRLPNYA 117 Query: 122 EFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E R F +G NDP V + +G+ ICEDIW ++ GA L +LN+SPY Sbjct: 118 VFDEVRYFSAG--NDPCVVEVAGMPVGLSICEDIWSPVP-AASARQAGARLLVNLNSSPY 174 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K +R ++ + H PI+YVNQVGGQDEL+FDG SF D ++ F Sbjct: 175 HRGKRDQRWSLLADRARENHFPIVYVNQVGGQDELVFDGGSFAVDAAGEVVCAAPDFDAG 234 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + E Y ++ D+ +T PLQE EA + A VL LRDYV KN F V++GL Sbjct: 235 LWWLELGYQDATVA---ITPDTVAT---PLQEIEAVWRALVLGLRDYVDKNGFPGVVLGL 288 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ A+AVDALG + V +M+P++YT+ S+EDA A A LG Y + I + Sbjct: 289 SGGIDSAVTLALAVDALGADRVHAVMMPFRYTASISIEDAEAEALTLGVDYRSISIEPIY 348 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + +S+ I EN+Q+R RG +LM++SN ++LTT NKSE++VGY TLY Sbjct: 349 EAFMASLSEEFAGLLPNITEENLQARCRGVLLMSISNKKNLLVLTTGNKSELAVGYSTLY 408 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF+ LKD K V+ LA +RNS +GP VIP ++ + PSAEL P Q D Sbjct: 409 GDMAGGFDVLKDCPKMLVYALARFRNS------VGP---VIPERVITRPPSAELAPDQKD 459 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLP Y +LD II+ VE + + I + + + VR V L+ +EYKRRQAPVG +I Sbjct: 460 EDSLPAYEVLDQIIELYVEQDLTAIEIISRGFEEPDVRRVIRLVDLNEYKRRQAPVGVRI 519 Query: 539 TAKSFGRDRLYPISNKFR 556 + ++FGRDR YPI+ +R Sbjct: 520 SQRAFGRDRRYPITWAWR 537 >gi|307728981|ref|YP_003906205.1| NAD+ synthetase [Burkholderia sp. CCGE1003] gi|307583516|gb|ADN56914.1| NAD+ synthetase [Burkholderia sp. CCGE1003] Length = 579 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 230/584 (39%), Positives = 335/584 (57%), Gaps = 35/584 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQ+N VGD AGN+AK A +A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQINVTVGDFAGNVAKIVAAARDAHNAGAKLLVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQD----------------QEGV-----LNSVV 101 A ++A+ L + G ++VG P +D + GV N+ Sbjct: 62 TASAAALRDLAAQLEPFAGLHVIVGHPLRDSANGANQGHGNANAPIERGVPPVDTFNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 +L G I+ K +LPN F EKR F S P VF ++ G++ICED W +++ Sbjct: 122 LLVDGRIVGTYRKQDLPNTEVFDEKRYFAS--DPQPFVFELDGVKYGVVICEDAW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SP++ NK R +I+ +I LP++YVN VG QDEL+FDG Sbjct: 179 AQMAKAAGAQVLLIPNGSPFHLNKEAVRFDILRARIRETGLPMVYVNMVGAQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE---EEADY 276 SF D +L +M F E E+ + ++ S+ + E E Y Sbjct: 239 SFVLDAHGELVAKMPQFEETTAFVEFENGAPVRNQTSTANGSSGADHAIAPELTLEAQVY 298 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A V+ +RDYV KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S Sbjct: 299 AALVMGVRDYVNKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAVMMPSRYTADIST 358 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DAA A+ +G +YD + I + + F + ++Q P ENIQ+RIRG +LMALSN Sbjct: 359 TDAADMARRVGVRYDEIAIAPMFDAFRNSLAQEFAGRPEDATEENIQARIRGTLLMALSN 418 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN Sbjct: 419 KFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNQASTFE----R 474 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETV 515 VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Y E V Sbjct: 475 QNVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRSLAEIIAAGYAAEDV 534 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 535 KRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPV 578 >gi|83749198|ref|ZP_00946200.1| Glutamine-dependent NAD(+) synthetase [Ralstonia solanacearum UW551] gi|207742674|ref|YP_002259066.1| nh3-dependent nad+ synthetase protein [Ralstonia solanacearum IPO1609] gi|83724139|gb|EAP71315.1| Glutamine-dependent NAD(+) synthetase [Ralstonia solanacearum UW551] gi|206594068|emb|CAQ60995.1| nh3-dependent nad+ synthetase protein [Ralstonia solanacearum IPO1609] Length = 546 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/564 (40%), Positives = 330/564 (58%), Gaps = 35/564 (6%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNAARILAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLGAT 64 Query: 67 SSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV---------LNSVVILDAGNIIAVRDKIN 116 S A+D L ++ G +++G P+ E N+ + G + K+ Sbjct: 65 SRALDALVAELAAFPGLHVLIGHPQLSFEAPAPGSALPKPTNTATVAVDGRTLGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPN F EKR F +G +P VF R G++ICED W K GAE + Sbjct: 125 LPNNEVFDEKRYFQAGC--EPFVFEVEGTRFGVIICEDAWY-PQATAWAKTAGAEVVLIP 181 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ +K R +I+ + LP +YVN VGGQDEL+FDG SF D + +M Sbjct: 182 NASPYHLDKEDLREQIIGARAKESGLPHVYVNLVGGQDELVFDGGSFALDAHGKPVARMA 241 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F+E + +D Q ++ ++ + Y A L +RDY+ KN F Sbjct: 242 QFAEG--VGYVRFDGARPQPGEIAQEATLEAQV--------YEALKLGVRDYIGKNGFPG 291 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD +P Sbjct: 292 AIIGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAVRLGVRYDEIP 351 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I + + F ++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE++VG Sbjct: 352 IMPMFDAFRGALADEFRNLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVG 411 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR Sbjct: 412 YCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELR 462 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 +QTDQ+SLP Y LD I++R +E + ++ + + V+ + LL +EYKRRQAP Sbjct: 463 ENQTDQDSLPEYAALDAIVQRYMEQNQPVVDIIAAGFAEADVQKIVRLLKINEYKRRQAP 522 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 VG ++T ++FGRD YPI+++F++ Sbjct: 523 VGIRVTQRAFGRDWRYPITSRFKE 546 >gi|207723618|ref|YP_002254016.1| nh3-dependent nad+ synthetase protein [Ralstonia solanacearum MolK2] gi|206588821|emb|CAQ35783.1| nh3-dependent nad+ synthetase protein [Ralstonia solanacearum MolK2] Length = 546 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 226/564 (40%), Positives = 330/564 (58%), Gaps = 35/564 (6%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNAARILAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLGAT 64 Query: 67 SSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV---------LNSVVILDAGNIIAVRDKIN 116 S A+D L ++ G +++G P+ E N+ + G + K+ Sbjct: 65 SRALDALVAELAAFPGLHVLIGHPQLSFEAPAPGSALPKPTNTATVAVDGRTLGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPN F EKR F +G +P VF R G++ICED W K GAE + Sbjct: 125 LPNNEVFDEKRYFQAGC--EPFVFEVEGTRFGVIICEDAWY-PQATAWAKTAGAEVVLIP 181 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + +M Sbjct: 182 NASPYHLDKEDLREQIIGARVKESGLPHVYVNLVGGQDELVFDGGSFVLDAHGKPVARMA 241 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F+E + +D Q ++ ++ + Y A L +RDY+ KN F Sbjct: 242 QFAEG--VGYVRFDGARPQPGEIAQEATLEAQV--------YEALKLGVRDYIGKNGFPG 291 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD +P Sbjct: 292 AIIGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAVRLGVRYDEIP 351 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I + + F ++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE++VG Sbjct: 352 IMPMFDAFRGALADEFRNLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVG 411 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR Sbjct: 412 YCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELR 462 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 +QTDQ+SLP Y LD I++R +E + + + + V+ + LL +EYKRRQAP Sbjct: 463 ENQTDQDSLPEYAALDAIVQRYMEQNQPVADIIAAGFAEADVQKIVRLLKINEYKRRQAP 522 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 VG ++T ++FGRD YPI+++F++ Sbjct: 523 VGIRVTQRAFGRDWRYPITSRFKE 546 >gi|330825694|ref|YP_004388997.1| NAD+ synthetase [Alicycliphilus denitrificans K601] gi|329311066|gb|AEB85481.1| NAD+ synthetase [Alicycliphilus denitrificans K601] Length = 552 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 239/564 (42%), Positives = 331/564 (58%), Gaps = 27/564 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L I+IAQLN VVGD+ GN K A ++ G L+L EL I GY EDL + +F+ Sbjct: 3 LAISIAQLNFVVGDLQGNAQKIIDAARQSYAAGARLLLTPELAICGYAAEDLFLRPAFLA 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQ------EGVLNSVVILDAGNIIAVRDKINL 117 AC A+ + T D G IV+G PR LN+ +L AG + K L Sbjct: 63 ACDEAVQAVARGTADLAGLAIVLGHPRAAAPGAPAFSSCLNAASVLRAGRVEQTYAKREL 122 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 PNY F E+R F++G + P VF +R+G+LICED W S + GA+ L +N Sbjct: 123 PNYQVFDERRYFVAG--DAPCVFEVEGVRVGLLICEDAW-FSAPARDAAAAGAQLLAVIN 179 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASP++ K +R + + +++ LP++Y + VGGQDE++F+G SF + +A + Sbjct: 180 ASPFHLGKGAEREQTMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALNADGTVAMRAPA 239 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHK 294 F E+ + H Q + M D A P + EAD ++A VL +RDYV KN F Sbjct: 240 FEEKLVFAQVHQAQAGIE---MEADVA-----PERSLEADLWDALVLGVRDYVGKNGFPG 291 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++GLSGGIDSAL AIAVDALG + V+T+M+P YT+ S DA A LG +YD + Sbjct: 292 ALLGLSGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAARLGVRYDEIA 351 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I F + ++ + EN+Q+RIRG +LMALSN A++LTT NKSE++ G Sbjct: 352 IAPQFEAFKAALAPLFEGRAEDTTEENLQARIRGTLLMALSNKFGAVVLTTGNKSEMATG 411 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAEL 473 Y TLYGDM+GGF +KD+ KT+VF LA WRN++ +G P IP I+ + PSAEL Sbjct: 412 YCTLYGDMAGGFAVIKDVVKTRVFDLARWRNANDPYGTGANP----IPERIIIRPPSAEL 467 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQA 532 RP Q DQ+SLPPY +LD I+ R +EN+E + + Y+ V V L+ +EYKRRQA Sbjct: 468 RPDQKDQDSLPPYEVLDAILARYMENDEPVEDIVRAGYDRADVERVTRLIKINEYKRRQA 527 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 PVG ++T +SFG+D YPI+NKFR Sbjct: 528 PVGVRVTRRSFGKDWRYPITNKFR 551 >gi|237748647|ref|ZP_04579127.1| NAD+ synthase [Oxalobacter formigenes OXCC13] gi|229380009|gb|EEO30100.1| NAD+ synthase [Oxalobacter formigenes OXCC13] Length = 537 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 232/558 (41%), Positives = 327/558 (58%), Gaps = 30/558 (5%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K+AIAQ+N VGD++GN + +A G D++L EL ++GYPPEDL+ + SF + Sbjct: 4 KVAIAQINSTVGDLSGNRERIAEFVRKAAALGADIVLTPELSLTGYPPEDLLLQHSFHSS 63 Query: 66 CSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D LK++ D ++VG N+ IL G II K LPNY+ F Sbjct: 64 TQLELDRLKNELADLDNVFVLVGHHLIKGGLCYNACSILVNGTIIGTYFKQELPNYTVFD 123 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 EKR F G N+P+VF+ + GI ICED+W K + GA+ + +N+SPY+ Sbjct: 124 EKRYFAPG--NEPLVFKVKGVCFGIGICEDVWFPLPPQKA-RAAGADVMLVMNSSPYHMG 180 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K+ +R IV + + IY N VGGQDEL+FDG SF + ++ Q+K E Sbjct: 181 KMHQRPVIVRQNVIGQGMSAIYANLVGGQDELVFDGCSFAMNTDGKVCVQLKQCEE---- 236 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D ++ ++ + P E E Y A VL +RDYV KN F VIIGLSGG Sbjct: 237 -----DLEIVSFDNKQPVNGRMEEHPTVESEV-YRALVLGVRDYVTKNGFPGVIIGLSGG 290 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +DSAL AIAVDALG E V+ +M+P YTS S DA+ A L YD +PI D + F Sbjct: 291 VDSALVLAIAVDALGPEKVRAVMMPSPYTSDISQIDASDMAGRLKVAYDEIPISDCFSSF 350 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S ++ + P EN+Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM Sbjct: 351 LSTLAPQFNKLPEDSTEENLQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDM 410 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF +KD+YKT V++L +RNS +++VIP +L ++P+AEL+P+Q DQ++ Sbjct: 411 AGGFAVIKDIYKTLVYRLCHYRNS---------ISDVIPERMLTRAPTAELKPNQFDQDT 461 Query: 483 LPPYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 LPPY +LD I++ +E S + N YN V + L+ +EYKRRQAP+G +IT Sbjct: 462 LPPYEVLDTIVRMFMEENRSVGEIVKNG--YNTTVVERIVRLMRINEYKRRQAPIGIRIT 519 Query: 540 AKSFGRDRLYPISNKFRD 557 + FGRD PI++K+RD Sbjct: 520 PRGFGRDWRCPITSKYRD 537 >gi|300703412|ref|YP_003745014.1| nh3-dependent nad+ synthetase (nade) [Ralstonia solanacearum CFBP2957] gi|299071075|emb|CBJ42384.1| putative nh3-dependent nad+ synthetase (nadE) [Ralstonia solanacearum CFBP2957] Length = 546 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/564 (39%), Positives = 330/564 (58%), Gaps = 35/564 (6%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN+ + A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNVVRIVAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLNAT 64 Query: 67 SSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV---------LNSVVILDAGNIIAVRDKIN 116 S A+D L + G +++G P+ E N+ + G ++ K+ Sbjct: 65 SRALDALVVELAAFPGLHVLIGHPQLSFEAPAPGSALPKPTNTATVAVDGRMLGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPN F EKR F +G +P VF R G++ICED W K GAE + Sbjct: 125 LPNNEVFDEKRYFQAGC--EPFVFEVEGTRFGVIICEDAWY-PQATAWAKTAGAEVVLIP 181 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + +M Sbjct: 182 NASPYHLDKEDLREQIIGARVKESGLPHVYVNLVGGQDELVFDGGSFVLDAHGKPVARMA 241 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F+E + +D Q ++ ++ + Y A L +RDY+ KN F Sbjct: 242 QFAEG--VGYVRFDGARPQPGEIAQEATLEAQV--------YEALKLGVRDYIGKNGFPG 291 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD +P Sbjct: 292 AIIGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAVRLGVRYDEIP 351 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I + + F ++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE++VG Sbjct: 352 IMPMFDAFRGALADEFRNLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVG 411 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR Sbjct: 412 YCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELR 462 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 +QTDQ+SLP Y LD I++R +E + + + + V+ + LL +EYKRRQAP Sbjct: 463 ENQTDQDSLPEYAALDAIVQRYMEQNQPVADIIAAGFAEADVQKIVRLLKINEYKRRQAP 522 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 VG ++T ++FGRD YPI+++F++ Sbjct: 523 VGIRVTQRAFGRDWRYPITSRFKE 546 >gi|89900489|ref|YP_522960.1| NAD+ synthetase [Rhodoferax ferrireducens T118] gi|89345226|gb|ABD69429.1| NAD+ synthetase [Rhodoferax ferrireducens T118] Length = 561 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 238/573 (41%), Positives = 334/573 (58%), Gaps = 36/573 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ +AQL+ VVGD+AGN K + A G+ L+L EL I GY EDL + +FI Sbjct: 3 LKLCVAQLDFVVGDMAGNAKKIIESARSAYADGVRLLLTPELSICGYAAEDLFLRAAFIA 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFP-----RQDQEGVL---NSVVILDAGNIIAVRDKI 115 AC A+ T+ + +VVG P R V N+ +L G +IA K Sbjct: 63 ACDDAVKTVARELAGLKDMSVVVGHPTGGDSRTRSVAVSRRHNAASVLREGAVIATYAKR 122 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVF---------RDIRLGILICEDIWKNSNICKHLKKQ 166 LPNY F E+R F G+ D VF + I++G+LICED W + + + Sbjct: 123 ELPNYQVFDERRYFTPGH--DVCVFEAGEADKMGQKIKVGLLICEDAWFEAP-ARQTQAA 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 GAE L +NASP++ K +R +++ ++ LP++Y + VGGQDE++F+G SF + Sbjct: 180 GAELLVVINASPFHVGKGDEREQMMRERVRACGLPLVYAHLVGGQDEVVFEGRSFALNAN 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRD 285 ++A + F + + + + + Y++ D A P + +AD ++A VL +RD Sbjct: 240 GEVAARAPSFIQNELVIQV---SRAYEAIYLAADIA-----PERSLDADLWDALVLGVRD 291 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y+ KN F V++GLSGGIDSAL A+AVDALGK+ V+TIM+P YT+ S DA A Sbjct: 292 YIGKNGFPSVLLGLSGGIDSALVLAVAVDALGKDRVRTIMMPSPYTADISWIDARDMAAR 351 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG +YD + I F ++ Q ENIQ+RIRG +LMALSN +++LTT Sbjct: 352 LGVRYDEISIVPEFEAFKKSLAGEFQGLAEDTTEENIQARIRGTLLMALSNKFGSIVLTT 411 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSI 464 NKSE++ GY TLYGDM+GGF +KDL KT VF+LA WRN H +G P IP I Sbjct: 412 GNKSEMATGYCTLYGDMAGGFAVIKDLAKTTVFRLARWRNEHDPYGTGQAP----IPERI 467 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLY 523 + + PSAELRP+QTDQ+SLP Y +LD I++R +EN++S + V V L+ Sbjct: 468 ITRPPSAELRPNQTDQDSLPAYEVLDAILERYMENDQSIEEIIAAGFARLDVEKVTRLIK 527 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +EYKRRQAPVG ++T +SFG+D YPISNKFR Sbjct: 528 INEYKRRQAPVGIRVTHRSFGKDWRYPISNKFR 560 >gi|254450479|ref|ZP_05063916.1| glutamine-dependent NAD(+) synthetase [Octadecabacter antarcticus 238] gi|198264885|gb|EDY89155.1| glutamine-dependent NAD(+) synthetase [Octadecabacter antarcticus 238] Length = 561 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/562 (41%), Positives = 337/562 (59%), Gaps = 13/562 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGDIAGN KAR A E+ G D+++ E+F+ GY +DL+ K Sbjct: 6 MSDRFRLTMAQLNPTVGDIAGNAEKARVAWEQGRAAGADMVMLPEMFLVGYQTQDLIMKP 65 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++ + L + DG + +G P ++ + + N+ +L AG II+ K LPN+ Sbjct: 66 AFERDAAAQLAQLAAACADGPM-LGIGGPLREGDKLRNAYFVLKAGKIISTTRKFFLPNF 124 Query: 121 SEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + F E R F P +R+G ICED W ++C+ + + GAE L N Sbjct: 125 NVFDEVRLFSRADMQGPFSTGGDAGSLRIGTPICEDAWY-PDVCEAMVESGAEMLLVPNG 183 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R + +++ +P++Y+N VGGQD+ +FDG SF + LA QM F Sbjct: 184 SPYFRDKFSVRLNQMVARVTECDVPLVYLNMVGGQDDQVFDGGSFVLNRHGALAVQMPWF 243 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E H D + ++++D + E DY A V++LRDY+ K F KV+ Sbjct: 244 EEAVA----HVDFVRTDAGWVAEDGDKN--LEPDTMETDYAAMVMALRDYMAKTGFKKVL 297 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGG+DSA+ AAIA DALG +NV+ +M+P +YTS SL+DA A A ALG +YDV+ I Sbjct: 298 LGLSGGVDSAIVAAIAADALGPDNVRCVMMPSEYTSDASLDDAKAAAAALGVRYDVVAIG 357 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 ++ G+ ENIQSRIRG +LMA SN MLLTT NKSE++VGY Sbjct: 358 ATRAAVTQTLAPLFAGLDDGLTEENIQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYA 417 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NP+KDLYKT+VF + WRN++ P E+IP +I++K PSAELR Sbjct: 418 TIYGDMAGGYNPIKDLYKTRVFDICRWRNANHRPWMNAPAGEMIPVAIIDKPPSAELRDD 477 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D +SLP Y +LD I+ +V+++ S + Y+ V+ +EHLLY SEYKR Q+ G Sbjct: 478 QKDSDSLPEYDVLDGILTLLVDDDASVADCVAAGYDRAVVKKIEHLLYISEYKRFQSAPG 537 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 +++ K+F DR YPI N++RD Sbjct: 538 PRLSMKAFWLDRRYPIVNRWRD 559 >gi|330966002|gb|EGH66262.1| glutamine-dependent NAD+ synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 535 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 232/554 (41%), Positives = 330/554 (59%), Gaps = 28/554 (5%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFIQACS 67 +AQLN VGD+ GN+ K +A + A G +I+F EL + GYPPEDL+ + S Sbjct: 1 MAQLNIRVGDVHGNVEKIIKAAQTARDDLGAHVIVFPELTLCGYPPEDLLLRSSMQSRIE 60 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 A+ ++ G IV+GFP + NS ++ G +A K LPNY F EKR Sbjct: 61 KALARVREAAR--GIVIVIGFPWVEDGARYNSCAVISEGEEVARYYKQRLPNYRVFDEKR 118 Query: 128 TFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 F SG + I++GI ICEDIW + + K GA+ + +LNASP++ K +R Sbjct: 119 YFESGSGPCVVNLFGIQVGITICEDIWFSEPL-KQACDAGAQIMLTLNASPFHRGKQAER 177 Query: 188 HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY 247 ++ + +P++YVNQVGGQDEL+FDG SF DG ++ + F E ++T++ Sbjct: 178 EALLAQRADECSIPMMYVNQVGGQDELVFDGNSFVVDGNGKVTQRAPAFEEGLYVTDFD- 236 Query: 248 DQQLSQWNYMSDDS----ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +D+S T+ L E + Y A V ++DYV +N F V++GLSGGI Sbjct: 237 ---------CTDNSLVPVPGTVTELLSLEASVYQALVSGVKDYVHRNGFKGVVLGLSGGI 287 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A+A DALG ENV+ +M+PY YT+ S +DA A LG KY VLPI +V F Sbjct: 288 DSALVLAVAADALGAENVEAVMMPYHYTAQMSQDDAREEADILGVKYSVLPIASMVEAFL 347 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ + EN+Q+R RG +LMA+SN + ++LTT NKSE++VGY TLYGDM+ Sbjct: 348 STLAPMFEGLGKDTTEENLQARCRGTMLMAISNKKRYLVLTTGNKSEMAVGYATLYGDMA 407 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+ KT VF+L +RN+ L VIP ++++ PSAEL P Q D++SL Sbjct: 408 GGFDVLKDVPKTLVFKLCEYRNT---------LDYVIPQRVIDRPPSAELAPDQKDEDSL 458 Query: 484 PPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPYP+LD+I++ VE + S +E ++ E VR V L+ +EYKRRQA VG +IT + Sbjct: 459 PPYPVLDEILRLYVEQDLSADAIIEEGFDTEVVRKVIRLVDLNEYKRRQAAVGPRITERG 518 Query: 543 FGRDRLYPISNKFR 556 FGRDR YPI++ +R Sbjct: 519 FGRDRRYPITSGWR 532 >gi|260221021|emb|CBA29170.1| Probable glutamine-dependent NAD(+) synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 562 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/569 (40%), Positives = 322/569 (56%), Gaps = 31/569 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ +AQLN +VGD+ GN+ K A A QG+ L+L EL I GY EDL + +FIQ Sbjct: 7 LKLCVAQLNFIVGDLNGNVKKIVDAATHAYDQGVRLVLTPELSICGYAAEDLFLRPAFIQ 66 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQ--------EGVLNSVVILDAGNIIAVRDKI 115 AC A+ ++ G +VVG P + N+ +L G ++A K Sbjct: 67 ACDDAVKSVARQLAGLKGLSVVVGHPTGGDSRTRSVAIQSRFNAASVLREGQVVAHYAKR 126 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRD------IRLGILICEDIWKNSNICKHLKKQGAE 169 LPNY F E+R F G VF +++G+LICED W + K+ GAE Sbjct: 127 ELPNYQVFDERRYFSPG--QGVCVFEAGEGASAVKVGLLICEDAWFEEP-ARLAKEAGAE 183 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L +NASP++ K +R + + LP++Y + VGGQDE++F+G SF D Q + Sbjct: 184 LLAVINASPFHVGKGYEREARMGERCRATGLPLVYAHLVGGQDEVVFEGHSFTLDAQGAV 243 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQ 288 + F E F+ + Q+ + + + P + EAD ++A VL +RDYV Sbjct: 244 TGRAPSFKENLFVAQVARAQEAIKLVAVVE--------PERSAEADLWDALVLGVRDYVG 295 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 KN F ++GLSGGIDSAL +AVDALG + V+ IM+P YT+ S DA A +G Sbjct: 296 KNGFPGALLGLSGGIDSALVLTVAVDALGADKVRAIMMPSPYTADISWIDARDMAARMGV 355 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +YD + I F + ++ ENIQ+RIRG +LMALSN +++LTT NK Sbjct: 356 RYDEISIVPEFEAFKASLAGEFAGRAEDTTEENIQARIRGTLLMALSNKFGSIVLTTGNK 415 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++ GY TLYGDM+GGF +KDL KT VF+LA WRN+H G IP I+ + Sbjct: 416 SEMATGYCTLYGDMAGGFAVIKDLAKTTVFKLAWWRNAH---DPYGTCASPIPERIITRP 472 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEY 527 PSAELRP Q DQ+SLPPY +LD I++R +EN+ES Y E V V L+ +EY Sbjct: 473 PSAELRPDQKDQDSLPPYEVLDGILERYMENDESMETIIAAGYRTEDVERVTRLIKINEY 532 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKFR 556 KRRQAPVG ++T +SFG+D YPI+N+FR Sbjct: 533 KRRQAPVGIRVTHRSFGKDWRYPITNRFR 561 >gi|110833335|ref|YP_692194.1| NAD+ synthase [Alcanivorax borkumensis SK2] gi|110646446|emb|CAL15922.1| NAD+ synthase (glutamine-hydrolysing) [Alcanivorax borkumensis SK2] Length = 541 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 236/563 (41%), Positives = 321/563 (57%), Gaps = 36/563 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 ++I +AQ N +VGDI GN + A +EA R G DL+LF EL ++GYPPEDL+ + S Sbjct: 1 MRIIMAQQNALVGDIEGNAQRVIAASDEARRLLGADLVLFPELMLTGYPPEDLLLRPSL- 59 Query: 64 QACSSAIDTLKSDTHDGGAGI----VVGFPRQDQEGVLNSVVILDAGNIIAVRD--KINL 117 +S +D +D GA I V+G+P N+ ++ G + K +L Sbjct: 60 ---NSRVDAALADI---GAAISVPVVLGYPAVRNGHRRNAAGVMFPGETGPRHEYFKQHL 113 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F EKR F G LGI ICEDIW ++ L+K G + + +LNAS Sbjct: 114 PNYRVFDEKRYFQPGKDACTFDIDGWTLGITICEDIW-HAGPAAQLQKAGTDLILNLNAS 172 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY NK +R + V + LP++Y N VGGQDEL+FDGASF D Q Q F+ Sbjct: 173 PYRINKADERFDQVQARCRETGLPVLYCNLVGGQDELVFDGASFVCDSQGNRCVQAASFT 232 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVI 296 E + Q + +PL +A Y A VL+ RDYV KN F + Sbjct: 233 EALVPVDVQ-----CQGGHCEPRGE---VLPLPGPQAGMYQALVLATRDYVNKNGFKGAL 284 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL A+AVDALG E V+ +M+P++YTS SLEDA A+ L Y VLPI Sbjct: 285 LGLSGGIDSALTLAVAVDALGPERVEAVMMPFQYTSAMSLEDAEKQARTLRVHYRVLPIE 344 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 N F ++ + EN+Q+R RG +LMALSN + +++LTT NKSE++VGY Sbjct: 345 AAFNGFMDILREPFAGTSRDTTEENLQARCRGVLLMALSNKNGSVVLTTGNKSEMAVGYA 404 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF+ LKD++KT VF L WRN E+IP ++ + PSAEL P Sbjct: 405 TLYGDMAGGFSVLKDVFKTSVFNLCRWRNQQAG-------AEIIPDRVITRPPSAELAPD 457 Query: 477 QTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 Q D +SLP Y LD I++R VE + E+ I + ++ ETV V L +EYKRRQA Sbjct: 458 QVDSDSLPDYDELDAILERYVEQDMSAEAVIRDG--FDRETVYRVVKLTDRNEYKRRQAA 515 Query: 534 VGTKITAKSFGRDRLYPISNKFR 556 VG +++ ++FG+DR YPI+N +R Sbjct: 516 VGPRVSRRAFGKDRRYPITNGWR 538 >gi|262375848|ref|ZP_06069080.1| glutamine-dependent NAD+ synthetase [Acinetobacter lwoffii SH145] gi|262309451|gb|EEY90582.1| glutamine-dependent NAD+ synthetase [Acinetobacter lwoffii SH145] Length = 541 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/560 (40%), Positives = 331/560 (59%), Gaps = 27/560 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIAIAQ +P VG++ N K +A + DLI+F EL GYP EDL+ + S Sbjct: 1 MKSFKIAIAQFSPHVGNLDANTQKMIDLANQAKKDKADLIIFPELSTLGYPAEDLLIRPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 ++ +A + L T +V GF Q ++G NS ++ G ++ V +K LPNY Sbjct: 61 LVKRTKAAFEKL---TEVKDIVMVFGFVNQTEDGQRYNSAAVMKDGEVLGVYNKQVLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICED+W + + + L K + LNASPY Sbjct: 118 GVFDEKRYFGEGHQHLVFEYLGHKFGVLICEDVWSLATV-QQLAKLNIDTALVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R E + + +++ ++Y NQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRIETMAALVKQLNINLVYCNQVGGQDDLIFDGTSFVLNKSGEVALQAPTFQENL 236 Query: 241 FMTEWHYDQ-QLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + E++ +Q Q S+ + L Y + V++ RDYVQ++ F VI+GL Sbjct: 237 TIAEFNAEQLQFSK---------GAIAPALDTMAEIYQSLVMATRDYVQRSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALG + VQ +M+PY YT+ S+EDAAA AK +G + + I+ +V Sbjct: 288 SGGIDSALTLAIAVDALGADKVQAVMMPYTYTAQISVEDAAAQAKNMGVTFGIAEINPVV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + F ++ F P EN+Q+R RG +LMALSN ++L T NKSE++VGY TLY Sbjct: 348 SGFMQVLFPFFGNAPVDATEENLQARSRGTLLMALSNKFGNLVLATGNKSELAVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GG+ LKD+YKT VF+LA +RNS I+ T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGYAVLKDVYKTIVFELAKYRNS--ISE-----TPVIPERVITRPPSAELRPDQVD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLP Y ILD I+ +E + S +D + ++ E V+ V L+ +EYKRRQ +G Sbjct: 461 QDSLPAYDILDAILYSYIEEDMS--QDDIITKGFDAEVVKKVIRLVDINEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISNKFR 556 +I+++S+GR+R YPI N ++ Sbjct: 519 RISSRSYGRERRYPIVNGWK 538 >gi|254429711|ref|ZP_05043418.1| NAD synthase family [Alcanivorax sp. DG881] gi|196195880|gb|EDX90839.1| NAD synthase family [Alcanivorax sp. DG881] Length = 537 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 236/558 (42%), Positives = 318/558 (56%), Gaps = 34/558 (6%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFIQACS 67 +AQ N +VGDI GN + A +EA R G DL+LF EL ++GYPPEDL+ + S + Sbjct: 1 MAQQNALVGDIEGNAQRVIAAADEARRLLGADLVLFPELMLTGYPPEDLLLRPSL----N 56 Query: 68 SAIDTLKSDTHDGGAGI----VVGFPRQDQEGVLNSVVILDAGNIIAVRD--KINLPNYS 121 S +D +D GA I V+G+P N+ ++ G + K +LPNY Sbjct: 57 SRVDAALADI---GAAISVPVVLGYPAVRNGHRRNAAGVVFPGESGPRHEYFKQHLPNYR 113 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F G LGI ICEDIW + L++ GA+ + +LNASPY Sbjct: 114 VFDEKRYFQPGTDICTFDIEGWTLGITICEDIWHDGP-AAQLQQAGADLVLNLNASPYRA 172 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 NK +R V + LP++Y N VGGQDEL+FDGASF D Q Q F+E Sbjct: 173 NKADERFAQVQARSRETGLPVLYCNLVGGQDELVFDGASFVCDSQGNRCVQAASFTEALV 232 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + L + + +P EE Y A VL+ RDYV KN F ++GLSG Sbjct: 233 PVD------LQCQGGHCEPRGEELPLP-GPEEGMYQALVLATRDYVNKNGFKGALLGLSG 285 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL A+AVDALG E V+ +M+P++YTS SLEDA A+ L Y VLPI N Sbjct: 286 GIDSALTLAVAVDALGPERVEAVMMPFQYTSAMSLEDAEKQARTLRVHYRVLPIEAAFNG 345 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F ++S+ EN+Q+R RG +LMALSN + +++LTT NKSE++VGY TLYGD Sbjct: 346 FMDILSESFSGTARDTTEENLQARCRGVLLMALSNKNGSVVLTTGNKSEMAVGYATLYGD 405 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF+ LKD++KT VF L WRN E+IP ++ + PSAEL P Q D + Sbjct: 406 MAGGFSVLKDVFKTSVFNLCRWRNQQAG-------AEIIPDRVITRPPSAELAPDQVDSD 458 Query: 482 SLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 SLP Y LD I++R VE + E+ I + ++ ETV V L +EYKRRQA VG ++ Sbjct: 459 SLPDYDELDAILERYVEQDMSAEAVIRDG--FDRETVYRVVKLTDRNEYKRRQAAVGPRV 516 Query: 539 TAKSFGRDRLYPISNKFR 556 + ++FG+DR YPI+N +R Sbjct: 517 SRRAFGKDRRYPITNGWR 534 >gi|119505580|ref|ZP_01627651.1| NAD synthase [marine gamma proteobacterium HTCC2080] gi|119458523|gb|EAW39627.1| NAD synthase [marine gamma proteobacterium HTCC2080] Length = 536 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 222/552 (40%), Positives = 323/552 (58%), Gaps = 18/552 (3%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQGMD-LILFTELFISGYPPEDLVFKKSFIQACS 67 + Q+N VGD GN + A A+ + +D +++F EL ++GYPPEDL+ + S Q Sbjct: 1 MGQINTFVGDWQGNCERVLAACRSAHAKFIDAVVVFPELTLTGYPPEDLLLRPSLEQETD 60 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 + + L ++ ++VG+PR+ +G+ NS ++ G I+A DK +LPNY F EKR Sbjct: 61 AVLAQLCAELPPT-LWVIVGYPRRRTDGLYNSAGVIHDGKIVAEYDKQSLPNYQVFDEKR 119 Query: 128 TFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 F G + +++GI ICEDIW+ I + GA+ L +LNASP++ K +R Sbjct: 120 YFQEGTGACVVDISGVKVGITICEDIWEPEPIAGA-RAAGAQLLINLNASPFHRGKPLQR 178 Query: 188 HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY 247 +V + LP++YVNQVGGQDEL+FDG SF + +A F E W Sbjct: 179 QAMVAERARANDLPVVYVNQVGGQDELVFDGGSFAVNRDGAVAVSAVDFDEA---LSWLK 235 Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + S + + A + A + A VL ++DYV KN F V++GLSGGIDSA+ Sbjct: 236 VEASSLGDVKIGEGAKAE--ARDDVAAVWQALVLGVKDYVNKNGFPGVVLGLSGGIDSAV 293 Query: 308 CAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A+AVDALG E V +M+P++YT+ S+EDA A A A+G Y + I L F ++ Sbjct: 294 TLAVAVDALGAERVNAVMMPFRYTASISIEDAQAQAAAMGVAYRSISIEPLYESFNGALA 353 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + + I EN+Q+R RG +LM++SN ++LTT NKSE++VGY TLYGDM+GGF+ Sbjct: 354 EEFEGLAPNITEENMQARCRGVLLMSISNKKNLLVLTTGNKSELAVGYSTLYGDMAGGFD 413 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYP 487 LKD K V+ LA +RN+ L+ IP ++ + PSAEL P Q D++SLPPY Sbjct: 414 ALKDCPKMLVYALARYRNT---------LSSCIPERVITRPPSAELAPDQKDEDSLPPYE 464 Query: 488 ILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRD 546 +LD II+ VE + S + Q + ++ VR V L+ +EYKRRQAPVG +IT + FGRD Sbjct: 465 VLDAIIEHYVEQDLSASDIIAQGFAEDDVRRVLRLIDLNEYKRRQAPVGVRITQRGFGRD 524 Query: 547 RLYPISNKFRDH 558 R YPI+ +R Sbjct: 525 RRYPITWAWRSR 536 >gi|154249452|ref|YP_001410277.1| NAD+ synthetase [Fervidobacterium nodosum Rt17-B1] gi|154153388|gb|ABS60620.1| NAD+ synthetase [Fervidobacterium nodosum Rt17-B1] Length = 583 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/594 (39%), Positives = 343/594 (57%), Gaps = 44/594 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K+++A+AQ+N VGDI GN K +A +D+++F EL I+GYPPEDL+FK Sbjct: 1 MNKVRLALAQINATVGDIEGNKNKIIEYINKALENDVDIVIFPELSITGYPPEDLLFKSH 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 F++ AI+ + +VVGF D+EG + N+ +++ G + A K LPNY Sbjct: 61 FVRKNKEAIEEIARHVPKSLV-VVVGF--VDEEGDIFNAAAVINDGKVQAKYRKNYLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPY 179 F E R F G ++ D+R+GI ICEDIW + G A+ + +L+ASPY Sbjct: 118 GVFDEMRYFQKGTKALVVLLEDVRVGITICEDIWYPGGPARLESLLGDAQLIVNLSASPY 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 Y K+ R +++ + + + YVN VGGQDELIFDGAS + + ++ + K F E Sbjct: 178 YVEKIAWRERMLSVRANDNIATVAYVNCVGGQDELIFDGASLVVNEKGEIIGRAKQFEED 237 Query: 240 NFMTEWHY---------DQQLSQWNYMSDDSASTMYI---PLQEEEAD------------ 275 + + D + Q + D+ + I P + + Sbjct: 238 LLIVDVDLIDIDKTCVKDPRRRQDKQIMDEERKNLEIVKLPFESKPKRTKITNRVEKTLP 297 Query: 276 -----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 YNA VL+ RDY++KN K +IGLSGG+DS L A IAVDALG ENV + +P + Sbjct: 298 KVAEVYNALVLATRDYIRKNGMKKAVIGLSGGMDSTLVACIAVDALGAENVVGVSMPGPF 357 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 +S S EDA A+ LG K+ +PI + N F ++ ++ P I EN+Q+RIRG I Sbjct: 358 SSEHSKEDAKILAENLGIKFLTIPIMEAYNSFLNMFKPVFEDRPFDITEENLQARIRGVI 417 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN-SHGI 449 LMALSN ++LTT NKSEIS GY TLYGD +GG+ +KD+YKT V++LA + N +G Sbjct: 418 LMALSNKFGWIVLTTGNKSEISTGYSTLYGDTAGGYAVIKDVYKTFVYELAEYVNQKYG- 476 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQ 508 E+IP + EK+PSAELR +QTDQ+ LPPY ILD+I+K VE + S + ++ Sbjct: 477 -------REIIPRRVFEKAPSAELRENQTDQDKLPPYEILDEILKLYVEEDYSVSDIVER 529 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 +++ETV+ V ++ +EYKRRQ P G KIT ++FG+DR PI+N F++ + ++ Sbjct: 530 GFDEETVKKVAWMVDINEYKRRQMPPGPKITHRAFGKDRRLPITNAFKEWLEKK 583 >gi|206890265|ref|YP_002248293.1| NAD+ synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742203|gb|ACI21260.1| NAD+ synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 571 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 221/585 (37%), Positives = 339/585 (57%), Gaps = 47/585 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+++A+ Q+NP+VGDI GN +K +E+A ++ D+I+F EL ++GY PEDL+F S Sbjct: 1 MKKIRLALCQINPIVGDIEGNFSKILSFKEKAVKEKADIIVFPELILTGYTPEDLLFYPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ + A++ L + D +++G P + +E + NS VIL +I KI LPNYS Sbjct: 61 FIKKANEALNKLIENVKD--FVMILGLPVK-EEDLYNSAVILAEQKVIDTYHKIYLPNYS 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F SG + + G+ ICEDI+ + GAE + +++ASP+Y Sbjct: 118 VFDEMRYFKSGKRASVYEYSGVLFGVNICEDIFHPTLPSPIQASSGAELIINISASPFYA 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +K+ +++ + + + I Y+N VGGQDE++FDG S ++ K F E Sbjct: 178 GKFEKKLRMLSTRAYDMGVFIAYLNTVGGQDEIVFDGRSMVISPSGEIITMGKAFEEDFI 237 Query: 242 MTE-----------------WHYDQQLSQWNYMSDDSASTMYIP-----------LQEEE 273 + + W + + ++ +S + ++ + L EEE Sbjct: 238 VVDLDLEEVTRVRMREPKIRWESEFERAEIIKISGEQKKSLAVQSLQPSAFSLKILSEEE 297 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 + A LRDYV+KN F +V +GLSGGIDS+ A +A DALG + V + +P +YTS Sbjct: 298 EIFKALKTGLRDYVEKNGFSRVCLGLSGGIDSSFVALVATDALGSDRVTGVFMPSRYTSR 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +S ED K LG + + I ++ + ++ + P ENIQSRIRGNILMA Sbjct: 358 ESKEDVYELVKNLGIELIEISIDEIFEEYLRRLADTFKGLPEDTTEENIQSRIRGNILMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 +SN +++TT NKSE++VGY TLYGDM+GGF +KD+YKTQV+++A W + Sbjct: 418 ISNKFGWLVITTGNKSEMAVGYATLYGDMAGGFAVIKDVYKTQVYRVAKWASR------- 470 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEY 510 + IP I +K PSAELRP QTDQ++LPPY ILD+I+KR +E +EE + +Q + Sbjct: 471 ----DRIPERIFKKPPSAELRPGQTDQDTLPPYEILDEILKRHIEKCMSEEEIV--EQGF 524 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +TVR V ++ +E+KRRQ+P G KI+ S G+D +PI+N+F Sbjct: 525 DRDTVRKVLRMVKKAEFKRRQSPPGIKISPVSLGKDWRFPITNRF 569 >gi|312795378|ref|YP_004028300.1| glutamine-dependent NAD(+) synthetase [Burkholderia rhizoxinica HKI 454] gi|312167153|emb|CBW74156.1| Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) [Burkholderia rhizoxinica HKI 454] Length = 559 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/575 (40%), Positives = 332/575 (57%), Gaps = 40/575 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+N VGD AGNIAK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 1 MKIALAQINVTVGDFAGNIAKIVAAAQTAHDAGASLMIAPELALSGYPPEDLLLRPAFYT 60 Query: 65 ACSSAIDTLKSD-THDGGAGIVVGFP------------RQDQEGV-----LNSVVILDAG 106 A +A+ L + + G ++VG P R + GV N+ +L G Sbjct: 61 ASHAALSELAAQLSRFAGLRVLVGHPYRSAPTGDVNPNRPLERGVPPVDTFNAASLLAEG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLK 164 I+ K LPN F EKR F S + P VF ++ G++ICED W S Sbjct: 121 RIVGTYRKQELPNTEVFDEKRYFAS--NPQPFVFELEGVKFGVIICEDAWHPSAALLAKA 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 A+ L N SPY+ NK R +I+ +I +P +Y+N VG QDEL+FDG SF D Sbjct: 179 AG-AQVLLVPNGSPYHVNKEDVRVDILRERIRETGMPAVYLNLVGAQDELVFDGGSFVLD 237 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSL 283 +L ++ F EQ + E +D +Q ++ P + EA Y A VL + Sbjct: 238 AHGELMARLPQFVEQTAIVE--FDGAQAQRGEIA---------PRECVEAQVYAALVLGV 286 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F IIGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S+ DAA A Sbjct: 287 RDYLNKNGFPGAIIGLSGGVDSALVLAVACDALGAERVRAVMMPSRYTADMSMSDAAEMA 346 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + ++ P ENIQ+RIRG +LMALSN +++L Sbjct: 347 RRVGVRYDEIAIGPMFDAFRASLAAQFAGLPEDATEENIQARIRGTLLMALSNKFGSIVL 406 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ + ++IP Sbjct: 407 TTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAATTFA----TRDIIPER 462 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Y + V+ V L+ Sbjct: 463 ILTRAPSAELRENQTDQDSLPPYEVLDAIMRMYMEEDRSLEGIVAAGYARDDVQRVTRLI 522 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +EYKRRQAP+G ++T ++FGRD YPI++ F + Sbjct: 523 KINEYKRRQAPIGIRVTHRAFGRDWRYPITSHFSE 557 >gi|225850164|ref|YP_002730398.1| glutamine-dependent NAD+ synthetase [Persephonella marina EX-H1] gi|225645778|gb|ACO03964.1| glutamine-dependent NAD+ synthetase [Persephonella marina EX-H1] Length = 574 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 235/587 (40%), Positives = 335/587 (57%), Gaps = 45/587 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KKL++A+ QLN VGDI GN K A +EA D+I F EL I+GYPPEDL+ K S Sbjct: 1 MKKLRLALGQLNMTVGDIEGNTEKIISAIKEAKLHECDIIAFPELAITGYPPEDLLLKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI A++ + + + +VGF + E + N+ +L G I+AV K LPNY Sbjct: 61 FINRNLQALNRIAQASEN--IITIVGFVDK-VEDIYNAAAVLLNGKIVAVYHKNFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F G + ++G+ ICEDIW N +GAE + ++NASPY+ Sbjct: 118 VFDEVRYFQRGNEITLLNIEGYKIGLSICEDIWYPENPINIQAIEGAELIININASPYHI 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K K R +++ + + I YVN VGGQDEL+FDG S + + + F E+ Sbjct: 178 GKGKFREDMLKVRARDNLVSIAYVNLVGGQDELVFDGNSIIVGPDGSVLTKGRSFEEEIV 237 Query: 242 MTEWHYD----QQLS-------QWNYMSDDSASTMYIPLQ-----------------EEE 273 + + + D QQL + Y ++ +++ + E E Sbjct: 238 LCDINLDAIFRQQLKDNRLRNLRAMYKREEKVKEIHLDFKIKDKLETIPQKTILDRPEIE 297 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V +RDY+ KN F KV+IGLSGGIDS+L A IA DALGK+NV+ +++P ++TS Sbjct: 298 EIYKALVTGVRDYIHKNGFEKVVIGLSGGIDSSLTATIATDALGKDNVKGVLMPSQFTSK 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +S+EDA A+ LG + LPI D+ + + EN+Q+RIRGN+LMA Sbjct: 358 ESVEDALELAENLGIETFTLPITDIFEKYKDELKDIFAGLKPDATEENLQARIRGNLLMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN ++L T NKSE+SVGY TLYGDM GGF LKD+ KT+V++LA +RNS Sbjct: 418 LSNKFGWIVLATGNKSEMSVGYATLYGDMVGGFAVLKDVLKTKVYELAQYRNS------- 470 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEY 510 ++ VIP +LEK PSAEL+P Q D++ L PYPILD+II VE + + I + Sbjct: 471 --ISPVIPQRVLEKPPSAELKPDQRDEDELLPYPILDEIIMLYVEEDMPVQDIIR--MGF 526 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + +V V ++ +EYKRRQAP+G +IT ++FG+DR P++NKFR+ Sbjct: 527 DRHSVEKVVKMIDRNEYKRRQAPIGIRITHRAFGKDRRMPVTNKFRE 573 >gi|85711028|ref|ZP_01042088.1| NAD(+) synthase [Idiomarina baltica OS145] gi|85694941|gb|EAQ32879.1| NAD(+) synthase [Idiomarina baltica OS145] Length = 538 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 224/555 (40%), Positives = 321/555 (57%), Gaps = 31/555 (5%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSS 68 +AQL+ VG + N + + E +R D+I+F EL I+GYPPEDL+ + +A + Sbjct: 1 MAQLDFTVGALHNNTSLILKTVAEQSRD-HDIIVFPELAITGYPPEDLLLRTDHQEAVDN 59 Query: 69 AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRT 128 A++ + + D ++VG P + E + N + +L G + K LPN F E+R Sbjct: 60 AVEQISAAASD--CVVIVGHPSKVGEQLFNVISVLHRGECLLRYKKQRLPNTGVFDEQRY 117 Query: 129 FISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 F+ G ++ R+G++ICED+W + + L + + S+NASPY +K +R Sbjct: 118 FVPGDEGQVFEWQGYRIGLMICEDLWHPEPLAR-LADDQLDLVLSVNASPYEIDKHDQRL 176 Query: 189 EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD 248 ++ +++ PI Y+N GGQDELIFDG S D Q +L ++ H + + Sbjct: 177 SVLKQRVAEHGFPIAYLNNCGGQDELIFDGHSLVLDKQGELVAELPHCQTTLATLKLTTE 236 Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGG 302 + + P E++D Y+A VLS+RDYV KN F V++GLSGG Sbjct: 237 SLTCE-----------AFPPYAGEDSDLRLAHVYDALVLSVRDYVNKNGFKNVLLGLSGG 285 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL AIA DALG E VQ +M+P+KYTS SLEDA A+ L KYDV+PI + + F Sbjct: 286 IDSALTLAIASDALGSERVQAVMMPFKYTSNMSLEDAEQQAETLNVKYDVVPIEPMFDAF 345 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + F + EN+QSR RG +LMALSN S A++LTT NKSE++VGY TLYGDM Sbjct: 346 MKQLDPFFAGTSTDTTEENLQSRCRGVLLMALSNKSGALVLTTGNKSEVAVGYATLYGDM 405 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 GGF P+KD+ KT V+QLA++RN+ + IP ++E+ PSAEL P Q D +S Sbjct: 406 CGGFAPIKDVPKTLVYQLAAYRNTR---------SACIPERVIERPPSAELAPDQVDSDS 456 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LP Y LD I+ VE + S ++ +N+ VR L+ +EYKRRQA VG KITA+ Sbjct: 457 LPDYGDLDRILSLYVEQDWSVVDIIAAGFNEADVRRALKLVDINEYKRRQAAVGPKITAR 516 Query: 542 SFGRDRLYPISNKFR 556 +FGRDR YPI++ +R Sbjct: 517 NFGRDRRYPITSHYR 531 >gi|50085923|ref|YP_047433.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter sp. ADP1] gi|49531899|emb|CAG69611.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter sp. ADP1] Length = 541 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 234/560 (41%), Positives = 336/560 (60%), Gaps = 27/560 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G+I N + EA +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKIALAQFSPHIGNIDSNAQRMVEQANEAKKQNADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A LK + D +V GF Q +EG NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFQQLK-EVKD--IVMVFGFVHQTEEGHRYNSAAVMKDGVVLGVYNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F G+ + + + G+LICEDIW + N K L K E + LNASPY Sbjct: 118 SVFDEKRYFSPGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSKLNVETVLVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + +T +++ ++Y+NQVGGQD+LIFDG+SF + ++AFQ F E+ Sbjct: 177 VGKPQHRVQTLTELSKQLNVHLVYLNQVGGQDDLIFDGSSFIINHDGEVAFQAPSFKEEL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 + +E+ +Q+ Y D A P + A+ Y + V++ RDYVQ++ F VI+GL Sbjct: 237 YYSEFDIEQK----RYKKIDPA-----PALDTIAEIYQSLVMATRDYVQRSGFSGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIA DA+G + VQ +M+PY YTS S+EDA A+ +G + + IH +V Sbjct: 288 SGGIDSALTLAIAADAIGADKVQAVMMPYTYTSQISVEDATEQARRMGVTFGIAEIHPIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE++VGY TLY Sbjct: 348 NSFMQTLYPFFGNAPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELAVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RN+ T VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNTLSETP-------VIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLP Y ILD I+ +E ++S +D + ++ E V V L+ +EYKRRQ +G Sbjct: 461 QDSLPAYDILDAILYAYIEEDQS--QSDIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISNKFR 556 +I++++F R+R YPI N +R Sbjct: 519 RISSRAFSRERRYPIVNGWR 538 >gi|289432851|ref|YP_003462724.1| NAD+ synthetase [Dehalococcoides sp. GT] gi|288946571|gb|ADC74268.1| NAD+ synthetase [Dehalococcoides sp. GT] Length = 566 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/575 (40%), Positives = 332/575 (57%), Gaps = 34/575 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A ++A G D+I F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIVSHVQKARSLGADVIAFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ A+D + + G ++VG+ +G+ N+ I+ G++I KI LPNY Sbjct: 61 FVEENLQALDAVIKASQ--GITVIVGY-VDSHDGLRNAAAIIHNGSLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +++G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFLPGNRCPVYTICGLQVGVNICEDIWFTSGPSTAQANKGAELIINISASPYHF 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSDRARENRVYIAYTNMVGGQDELVFDGASDVFDYNGNLLIRGKQFQEDLV 237 Query: 242 MTEWHYDQQLSQWN---------YMSDDSASTM--------YIPLQEEEADYNACVLSLR 284 + + Q + ++S T+ + PL+ + Y A +L R Sbjct: 238 VLDLDIPVLPRQADTNANVPDSIFVSSAGFETLKPPIENIAFTPLEADAEVYQALLLGTR 297 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F KV+IGLSGGIDS+L A IA DALG ENV +++P +Y+S S+ D+ A Sbjct: 298 DYINKNGFKKVVIGLSGGIDSSLVATIAADALGPENVVGVIMPSRYSSAGSISDSLHLAG 357 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG K +PI L F + +S + ENIQ+RIRGN+LMALSN ++L Sbjct: 358 NLGIKTLQIPIDPLFQSFLNTLSDVFAGTEANTTEENIQARIRGNLLMALSNKFHWLVLN 417 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNKSE ++GY TLYGDM+GGF +KD+ K V++LA RN +G ++IP ++ Sbjct: 418 TSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLAHNRNK---LAGF----DLIPDNV 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEH 520 L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S DQ + + V+ V Sbjct: 471 LTKPPSAELKPNQLDTDSLPPYEVLDPILEAYVEQDKSI---DQIVALGFAADIVKRVVK 527 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 528 MVDRSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|238028323|ref|YP_002912554.1| NAD synthetase [Burkholderia glumae BGR1] gi|237877517|gb|ACR29850.1| NAD+ synthetase [Burkholderia glumae BGR1] Length = 561 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 232/577 (40%), Positives = 328/577 (56%), Gaps = 39/577 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVARIVEAARAAHDDGAQLLVAPELALSGYPPEDLLLRPAFY 61 Query: 63 ---------IQACSSAID--------TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA 105 + C + L++ + DG A +G + N+ +L Sbjct: 62 TEAAEALARLAECLKPFEGLAVLVGHPLRTPSADGNANRPIGRGATPVD-TYNAASLLVG 120 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHL 163 G I A K +LPN F EKR F + P VF R G++ICED W +++ + Sbjct: 121 GAIAATYRKQDLPNTEVFDEKRYFAT--DPQPCVFELNGTRFGVIICEDAW-HASAAQLA 177 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GAE L N SPY+ +K R IV +I LP++YVN VGGQDEL+FDG SF Sbjct: 178 KAAGAEVLLVPNGSPYHMDKDAVRVGIVRARIRETGLPVVYVNLVGGQDELVFDGGSFVL 237 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 DG +L +M F + + E+ + L + PL E Y A VL + Sbjct: 238 DGAGELVARMPQFEAGHAIVEFDGARPLP----------GEIAAPLPVEAQVYRALVLGV 287 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 288 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAAEMA 347 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F ++ ENIQ+RIRG +LMALSN +++L Sbjct: 348 RRVGVRYDEIAIAPMFDAFCGALADEFAGRDEDATEENIQARIRGTLLMALSNKFGSIVL 407 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ TEVIP Sbjct: 408 TTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEFGS----TEVIPAR 463 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E ++ Y++ V V L+ Sbjct: 464 ILSRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDQPLAAIVAAGYDEADVTRVTRLI 523 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAP+G ++T ++FGRD YPI+++F + I Sbjct: 524 KINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERI 560 >gi|147669591|ref|YP_001214409.1| NH(3)-dependent NAD(+) synthetase [Dehalococcoides sp. BAV1] gi|146270539|gb|ABQ17531.1| NH(3)-dependent NAD(+) synthetase [Dehalococcoides sp. BAV1] Length = 566 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 230/575 (40%), Positives = 332/575 (57%), Gaps = 34/575 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A ++A G D+I F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIVSHVQKARSLGADVIAFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ A+D + + G ++VG+ +G+ N+ I+ G++I KI LPNY Sbjct: 61 FVEENLQALDAVIKASQ--GITVIVGY-VDSHDGLRNAAAIIHNGSLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +++G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFLPGNRCPVYTICGLQVGVNICEDIWFTSGPSTAQANKGAELIINISASPYHF 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSDRARENRVYIAYTNMVGGQDELVFDGASDVFDYNGNLLIRGKQFQEDLV 237 Query: 242 MTEWHYDQQLSQWN---------YMSDDSASTM--------YIPLQEEEADYNACVLSLR 284 + + Q + ++S T+ + PL+ + Y A +L R Sbjct: 238 VLDLDIPVLPRQADTNANVPDSIFVSSAGFETLKPPIENIAFTPLEADAEVYQALLLGTR 297 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F KV+IGLSGGIDS+L A IA DALG ENV +++P +Y+S S+ D+ A Sbjct: 298 DYINKNGFKKVVIGLSGGIDSSLVATIAADALGPENVVGVIMPSRYSSAGSISDSLHLAG 357 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG K +PI L F + +S + ENIQ+RIRGN+LMALSN ++L Sbjct: 358 NLGIKTLQIPIDPLFQSFLNTLSDVFAGTEANTTEENIQARIRGNLLMALSNKFHWLVLN 417 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNKSE ++GY TLYGDM+GGF +KD+ K V++LA RN +G ++IP ++ Sbjct: 418 TSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLAHNRNR---LAGF----DLIPDNV 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEH 520 L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S DQ + + V+ V Sbjct: 471 LTKPPSAELKPNQLDTDSLPPYEVLDPILEAYVEQDKSI---DQIVALGFAADIVKRVVK 527 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 528 MVDRSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|163857180|ref|YP_001631478.1| NAD synthetase [Bordetella petrii DSM 12804] gi|163260908|emb|CAP43210.1| putative NAD synthetase [Bordetella petrii] Length = 544 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/562 (40%), Positives = 330/562 (58%), Gaps = 22/562 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++AIAQ+N VGDI GN A+ ++ A++QG D+++ EL ++GYPPEDL+ + Sbjct: 1 MSAARVAIAQINACVGDIKGNAARVLQSAHSAHQQGADVLVTPELVLTGYPPEDLLLRPH 60 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F++ +A+D L+ DT G ++VG + N+ +L G ++ V K LPNY Sbjct: 61 FVETQEAALDQLRRDTAGLAGLHLLVGHVLARGGKLYNAATVLCEGRVVGVYCKRELPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 S F E+R F ++ P+VF + +R G+ ICED+W + L NASP Sbjct: 121 SVFDEQRYFAE--ADQPLVFEVKGVRFGVNICEDMWFERAPRAAAQAGAQVLLVP-NASP 177 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K +R + ++Y N VGGQDEL+FDGASF D Q Q A ++ ++E Sbjct: 178 YNTGKQDERLRVARRCAQDTGCAVVYANLVGGQDELVFDGASFALDAQGQPAARLPDYTE 237 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + E + + +D + P EE +NA VLS+RDY+ KN F IIG Sbjct: 238 GVDVVEVDAAGAVRPLSRHADVA------PYCLEEQVWNALVLSVRDYLGKNGFPGAIIG 291 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSA+ A+AVDALG NV+T+M+P +YT+ S DA A+ LG ++D + I Sbjct: 292 LSGGIDSAVVLAVAVDALGAANVRTVMMPSRYTADISQTDAGDMAQRLGVRHDDIAIGPA 351 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V+ F ++++ P ENIQ+R+RG +LMALSN + ++LTT NKSE++ GY TL Sbjct: 352 VDAFEAMLAPQFAGLPVDATEENIQARVRGTLLMALSNKTGHLVLTTGNKSELTTGYCTL 411 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGF +KD+ KT V++LA WRN EVIP I+ + PSAELRP QT Sbjct: 412 YGDMAGGFAVIKDVPKTLVYRLAEWRNRE---------HEVIPRRIITRPPSAELRPDQT 462 Query: 479 DQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY ILD I++R +E +S + V V L+ +EYKRRQAP G + Sbjct: 463 DQDSLPPYDILDGIMERYMERNQSAAEIVAAGFPRPAVEQVVRLIRINEYKRRQAPPGPR 522 Query: 538 ITAKSFGRDRLYPISNKFRDHI 559 IT ++FGRD YP++N FR+ + Sbjct: 523 ITPRAFGRDWRYPVTNGFRETV 544 >gi|311693416|gb|ADP96289.1| NAD+ synthetase [marine bacterium HP15] Length = 538 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 234/565 (41%), Positives = 336/565 (59%), Gaps = 45/565 (7%) Query: 7 IAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + +AQL+ +VGDI GN + ARRA E D+++F EL ++GYPPEDL+ + S Sbjct: 1 MVMAQLDFLVGDIPGNTELVLDAARRASSE---HQADVVVFPELCLTGYPPEDLLLRPSM 57 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + A++ L+++ D IV+G P + + N+ V++DAG I K PNY Sbjct: 58 EVRVNEALERLQAERLD--PVIVIGAPLRHGALLYNAAVVIDAGEITGRYFKRFPPNYQV 115 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F G + R + +GI +CED+WK + + GA + +LNASPY + Sbjct: 116 FDEKRYFAEGRDVLTLDIRGVPVGITVCEDLWKEGPV-EDCAAAGARLILNLNASPYDID 174 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ--- 239 K +R ++ + + I+YVN VGGQDEL+FDG S FD L + F E Sbjct: 175 KQARRKALLERKSRENLVSIVYVNLVGGQDELVFDGGSMVFDHSGVLTAEAPQFGEGLYP 234 Query: 240 -NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE---EAD-YNACVLSLRDYVQKNNFHK 294 +F+ E H+ Q +SQ L EE EA+ Y A V +RDYV KN F Sbjct: 235 VDFLCE-HHCQPVSQA--------------LPEEPTLEANVYRALVTGVRDYVNKNGFKS 279 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++GLSGGIDSA+ A+AVDALGK+ V+ +M+P++YTS SLEDA A A ALG +YDV Sbjct: 280 VVLGLSGGIDSAVTLAVAVDALGKDRVRAVMMPFRYTSSMSLEDAEAEAVALGVQYDVFS 339 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I + + F ++ + EN+Q+R+RG +LM+LSN +++LTT NKSE++VG Sbjct: 340 IEPMYDAFMETLAGPFEGTTPDTTEENLQARLRGVLLMSLSNKFGSLVLTTGNKSEMAVG 399 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGF+ LKD+ KT VF+LA +RN+ ++ G EVIP ++ + PSAEL Sbjct: 400 YSTLYGDMAGGFDVLKDVPKTLVFRLAKYRNT--LSEG-----EVIPERVITRPPSAELA 452 Query: 475 PHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQ 531 P Q D++SLP Y +LD I+ VE + ++ + E D V V L+ +EYKRRQ Sbjct: 453 PDQKDEDSLPGYDVLDQILNLYVERDFSADAIVAEGFERVD--VERVIRLVDINEYKRRQ 510 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 AP+G +IT + FG+DR YPI+N ++ Sbjct: 511 APIGVRITERGFGKDRRYPITNGWK 535 >gi|120553808|ref|YP_958159.1| NAD+ synthetase [Marinobacter aquaeolei VT8] gi|120323657|gb|ABM17972.1| DNA-directed RNA polymerase, subunit H [Marinobacter aquaeolei VT8] Length = 554 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 233/568 (41%), Positives = 341/568 (60%), Gaps = 43/568 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKK 60 ++KL++ +AQL+ +VGDI GN A + A D+++F EL ++GYPPEDL+ + Sbjct: 14 VRKLRVVMAQLDFLVGDIPGNTDLILEATQRAWAEHQADIVVFPELCLTGYPPEDLLLRP 73 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A++ L+S +V+G P + + N+ ++++AG I K PNY Sbjct: 74 SLDLRVREALEKLQSAALP--PAMVIGAPIRSGGLLYNAALVIEAGQIRGRYFKRFPPNY 131 Query: 121 SEFHEKRTFISGYSNDPIVFRDIR---LGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 F EKR F G +D +V DI+ +GI +CED+WK+ + + GA + +LNAS Sbjct: 132 QVFDEKRYFAEG--SDTLVL-DIKGQPVGITVCEDLWKDGPL-EDAAAAGARLILNLNAS 187 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY +K +R ++ + + I+YVN VGGQDEL+FDG S +D L+ ++ F Sbjct: 188 PYDIDKQARRKALLERKSRENRVSIVYVNLVGGQDELVFDGGSMAYDHSGGLSAEVPQFE 247 Query: 238 EQ----NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE---EAD-YNACVLSLRDYVQK 289 E +F+ E H+ Q +S+ PL E EA+ YNA V +RDYV K Sbjct: 248 EGLYPVDFLCE-HHCQPISR--------------PLPPEPQLEANVYNALVTGVRDYVNK 292 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N F V++GLSGGIDSA+ A+AVDALGKE V+ +M+P++YTS SLEDA A A ALG + Sbjct: 293 NGFRSVVLGLSGGIDSAVTLAVAVDALGKERVRAVMMPFRYTSSISLEDAEAEATALGVQ 352 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 YDV I + + F + +++ EN+Q+R+RG +LM+LSN +++LTT NKS Sbjct: 353 YDVFSIEPMYDAFMAALAEPFAGTKPDTTEENLQARLRGVLLMSLSNKFGSLVLTTGNKS 412 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GGF+ LKD+ KT VF+LA +RN+ L+ VIP ++ + P Sbjct: 413 EMAVGYSTLYGDMAGGFDVLKDVPKTLVFRLARYRNT---------LSPVIPERVITRPP 463 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYK 528 SAEL P Q D++SLP Y +LD I+ VE + S E + E V V L+ +EYK Sbjct: 464 SAELAPDQKDEDSLPGYDVLDQILNLYVERDYSADAIVAEGFEREDVDRVVRLVDINEYK 523 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 RRQAP+G +IT + FG+DR YPI+N ++ Sbjct: 524 RRQAPIGVRITERGFGKDRRYPITNGWK 551 >gi|270308329|ref|YP_003330387.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides sp. VS] gi|270154221|gb|ACZ62059.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides sp. VS] Length = 566 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 231/575 (40%), Positives = 335/575 (58%), Gaps = 34/575 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A ++A G D+I F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIVGNIQKARSLGADVIAFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ A+DT+ + G ++VG+ +G+ NS ++ G +I KI LPNY Sbjct: 61 FVEENLHALDTVIKASQ--GITVIVGY-VNSSDGLHNSAAVIHNGCLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +++G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFMPGNRCPVYTICGLQVGVNICEDIWFTSGPSTAQASKGAELIINISASPYHL 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSNRARENRVYIAYTNMVGGQDELVFDGASNIFDYNGNLVLRGKQFQEDLL 237 Query: 242 MTEWHYDQQLSQWNYMSD------DSASTM-----------YIPLQEEEADYNACVLSLR 284 + + Q + ++ SAS + +PL + Y A +L + Sbjct: 238 VLDLDIPISPVQRDMNTEIPDSIFVSASGLSEPKLPVENSDSVPLDADAEVYQALLLGTK 297 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F KV+IGLSGGIDS+L AAIA DALG +NV +++P +Y+S S+ D+ A+ Sbjct: 298 DYINKNGFKKVVIGLSGGIDSSLVAAIATDALGSDNVVGVIMPSRYSSAGSISDSLRLAE 357 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L K +PI + F S +S+ + ENIQ+RIRGN+LMALSN ++L Sbjct: 358 NLRIKTLQIPIDPIFKSFLSTLSEVFAGTETDTTEENIQARIRGNLLMALSNKFHWLVLN 417 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNKSE ++GY TLYGDM+GGF +KD+ K V++LA RN ++G E+IP ++ Sbjct: 418 TSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLAHNRNK---SAGF----ELIPHNV 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEH 520 L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S DQ + + V+ V Sbjct: 471 LTKPPSAELKPNQFDTDSLPPYEVLDPILEAYVEQDKSI---DQIVALGFEESIVKRVVK 527 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 528 MVDRSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|294786968|ref|ZP_06752222.1| glutamine-dependent NAD(+) synthetase [Parascardovia denticolens F0305] gi|315226607|ref|ZP_07868395.1| NAD synthetase [Parascardovia denticolens DSM 10105] gi|294485801|gb|EFG33435.1| glutamine-dependent NAD(+) synthetase [Parascardovia denticolens F0305] gi|315120739|gb|EFT83871.1| NAD synthetase [Parascardovia denticolens DSM 10105] Length = 560 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/565 (40%), Positives = 320/565 (56%), Gaps = 32/565 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA+AQ++ VGD+ GN AK A QG D++LF E+ ++GYP EDL F+ +F Q Sbjct: 16 VTIALAQIDTCVGDLDGNAAKVLSYSRRAAGQGADVVLFPEMTLTGYPIEDLAFRATFRQ 75 Query: 65 ACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPNY 120 A TL D G G +VVG D G+ N +++L G + A DK LPNY Sbjct: 76 AAWDKASTLAEDLGKEGLGDLYVVVGTVAADAHGLPRNRLIVLHQGVVEASYDKHFLPNY 135 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G + + ++G ICEDIW+ L ++G + L ++N SPY Sbjct: 136 GVFDEFRIFSPGDLPLVMTIKGRKIGFAICEDIWQEGGPVAQLAQKGIDLLATINGSPYE 195 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ + V P+IY+NQVGGQD+L+FDGASF + + + F E Sbjct: 196 EGKGHIRTDLCARRAREVTAPVIYLNQVGGQDDLVFDGASFVVNPDGGVEERSPQFVE-- 253 Query: 241 FMTEWHYDQQLSQWNYM------SDDSASTMYIPLQE-EEADYNACVLSLRDYVQKNNFH 293 LS W SD + + IPL + +E Y ACVL L+DY+ KN F Sbjct: 254 ---------DLSFWTLPAVAGTDSDQAGRSTLIPLMDSDEEVYRACVLGLKDYMAKNGFK 304 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 V++GLSGGIDSAL A +A DA+G NV + +P Y+S S +DAA A +G Y++ Sbjct: 305 GVVLGLSGGIDSALVATMAADAIGGSNVWGLSMPSMYSSSGSKDDAADLAANMGAHYEIQ 364 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI L F Q + GI AEN+Q+R+RG ++MA SN + L T NKSE++ Sbjct: 365 PIEPLFQAFQK------QLDLQGIAAENLQARMRGVLVMAYSNSHGLLALATGNKSELAC 418 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY T+YGD GG+ P+KD+ KT+V+QLA WRNS+ + G P IP + + K PSAEL Sbjct: 419 GYSTIYGDAVGGYAPIKDVLKTKVWQLAKWRNSYALGKGQVP---PIPVNSILKPPSAEL 475 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQA 532 RP Q D +SLP Y +LD ++ +E + ++ ++ ETV V L+ +E+KRRQ Sbjct: 476 RPGQKDSDSLPEYELLDQVLASYIEKAHGRADLLKDGFDPETVDTVMRLVDKAEWKRRQY 535 Query: 533 PVGTKITAKSFGRDRLYPISNKFRD 557 P+G K+TA +FGRDR P+++ FR+ Sbjct: 536 PLGPKVTALAFGRDRRLPVTSAFRE 560 >gi|304316376|ref|YP_003851521.1| NAD+ synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777878|gb|ADL68437.1| NAD+ synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 545 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 234/571 (40%), Positives = 331/571 (57%), Gaps = 46/571 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLNP VGDI N K +EA + MDLI+F EL I GYPP+DL++ F++ Sbjct: 1 MKIALAQLNPTVGDIKNNCEKIIMYIKEAKKANMDLIVFPELSIIGYPPKDLLYNPDFLE 60 Query: 65 ACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNY 120 + SA++ L +T+D G++VG +D+E + NS ++L G II DK LPNY Sbjct: 61 SSYSALNELILPETND--IGVIVGIATKDKEKDYMLHNSALLLYNGKIIGQADKTLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK----------KQGAEF 170 F E+R F S F+ +RL + ICEDIW + + + + K + Sbjct: 119 DVFDEQRYFEPAKSRTCFDFKGMRLAVNICEDIWNDKDFWERPRYDIDVLEEQYKLNPDI 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 +++ASPY K + R ++V LP+IYVNQVGG DELIFDG SF + Sbjct: 179 FINISASPYNLGKQELRTKMVKQISKKYKLPLIYVNQVGGNDELIFDGNSFAINSNGDRV 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD----YNACVLSLRDY 286 ++ FSE + +L PLQE + D ++A +L LRDY Sbjct: 239 VNLRSFSEDIAFVDTENLDELK---------------PLQEIKEDISWVHDALILGLRDY 283 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +K F K ++GLSGGIDSA+ A+AV ALG+ENV + +P +Y+S S +DA A+ L Sbjct: 284 FRKTGFKKAVVGLSGGIDSAVTCALAVKALGRENVLGVSMPSRYSSEGSKDDARDLAQNL 343 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G +Y V+PI D+ + S+ ++ + EN+Q+RIRGN LM +SN M+LTT Sbjct: 344 GIQYRVIPIEDVFKSYISIFNKD-GNVLGDLAEENLQARIRGNYLMFISNREGYMVLTTG 402 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSEI+VGY TLYGDMSGG + D+ KT V++LA + N I +IP S +E Sbjct: 403 NKSEIAVGYCTLYGDMSGGLAVISDVPKTMVYELAKYINRDKI---------IIPLSTIE 453 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGS 525 K+PSAELRP+Q D +SLPPY ILDDI+K +E+++S + Y+ + VR V + + Sbjct: 454 KAPSAELRPNQKDTDSLPPYEILDDILKSYIEDDKSISEIIADGYDKDLVRDVIRKVNNA 513 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 EYKR+QA G K+T K+FG R PI+ +FR Sbjct: 514 EYKRKQAAPGLKVTTKAFGVGRRMPIAQRFR 544 >gi|300690788|ref|YP_003751783.1| nh3-dependent nad+ synthetase (nadE) [Ralstonia solanacearum PSI07] gi|299077848|emb|CBJ50486.1| putative nh3-dependent nad+ synthetase (nadE) [Ralstonia solanacearum PSI07] Length = 546 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/568 (40%), Positives = 330/568 (58%), Gaps = 43/568 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNAARIVAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLDAT 64 Query: 67 SSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV---------LNSVVILDAGNIIAVRDKIN 116 S A+D L ++ G +++G P+ E N+ + G + K+ Sbjct: 65 SRALDVLVAELAAFPGLHVLIGHPQLSFEAPAPGSALPKPTNTATVAVDGRVRGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPN F EKR F G+ +P VF R G++ICED W K GAE + Sbjct: 125 LPNNEVFDEKRYFQVGF--EPFVFDVEGTRFGVIICEDAWY-PQATAWAKAAGAEVVLVP 181 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + +M Sbjct: 182 NASPYHLDKEDLREQIIGARVKESGLPHVYVNLVGGQDELVFDGGSFVLDSGGKPVARMA 241 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTM---YIPLQEEEAD-YNACVLSLRDYVQKN 290 F E Y+ D A + P EA Y A L +RDY+ KN Sbjct: 242 QFVEG--------------VGYVRFDGARPLPGEIAPEATLEAQVYEALKLGVRDYIGKN 287 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +Y Sbjct: 288 GFPGAIIGLSGGVDSALVLAIAVDALGTDRVRAVMMPSRYTADISWLDARDMAARLGVRY 347 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 D +PI + + F ++++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE Sbjct: 348 DEIPIMPMFDAFGGVLAEEFRNLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSE 407 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PS Sbjct: 408 MAVGYCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPS 458 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELR +QTDQ+SLP Y LD I++R +E + + + + VR + L+ +EYKR Sbjct: 459 AELRENQTDQDSLPEYAALDAIVQRYMEQNQPVTDIIAAGFAEADVRKIVRLIKINEYKR 518 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFRD 557 RQAPVG ++T ++FGRD YPI+++F++ Sbjct: 519 RQAPVGIRVTQRAFGRDWRYPITSRFKE 546 >gi|222100295|ref|YP_002534863.1| glutamine-dependent NAD(+) synthetase [Thermotoga neapolitana DSM 4359] gi|221572685|gb|ACM23497.1| glutamine-dependent NAD(+) synthetase [Thermotoga neapolitana DSM 4359] Length = 555 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 223/566 (39%), Positives = 323/566 (57%), Gaps = 40/566 (7%) Query: 23 IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGA 82 + KA A + A +G DL++F ELF+ GYPPEDL+ + SF++ + L S T Sbjct: 1 MKKAIEALKTAEERGSDLLIFPELFLPGYPPEDLMLRLSFLRENRRYLLELASHTKSCEV 60 Query: 83 GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD 142 ++VGF D++ N+ +L G ++ V K+ LPNY F E+R F G + D Sbjct: 61 TVLVGFIDSDEDA-YNAAAVLKRGEVLGVYRKMFLPNYGVFDERRYFKPGEELLVLKMGD 119 Query: 143 IRLGILICEDIWKNSNICKHLK-KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLP 201 +++G+ ICEDIW L +G + +L+ASPY+ K + R E ++ + H Sbjct: 120 VKIGVTICEDIWNPVEPSASLSLGEGVHLVANLSASPYHVGKPRLRKEYLSMKAYDYHTA 179 Query: 202 IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLS------QWN 255 I Y N VGGQDEL+FDG S D ++ K F E+ + D+ L + Sbjct: 180 IAYCNMVGGQDELVFDGGSIVVDASGEVISYGKLFEEEIITVDLDLDENLRVSLLDPRRR 239 Query: 256 YMSDDS-------------ASTMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVII 297 YM + S+ + PL + EE + A V +RDYV+KN F KV+I Sbjct: 240 YMRSQNYPVKIVDVGGLRRKSSHFDPLIHPIPKREEEMFRALVTGVRDYVRKNGFEKVVI 299 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DS+L A IA +ALGKENV+ +++P YTS SLEDA A+ LG + ++PI D Sbjct: 300 GLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKSSLEDAQKLAENLGIETFIIPITD 359 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + + + I ENIQ+RIRGN LMALSN ++LTT NKSE++ GY T Sbjct: 360 VFRSYLDALKEVFAGKEPDITEENIQARIRGNYLMALSNKFGWLVLTTGNKSEMATGYAT 419 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF +KD+YKT V+++ W N G E+IP ++ K PSAELRP Q Sbjct: 420 LYGDMAGGFAVIKDVYKTDVYRIGRWYNEW---KG----REIIPENVFVKPPSAELRPGQ 472 Query: 478 TDQESLPPYPILDDIIKRIVEN----EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 TDQE LPPY ILD+I+K +E EE + ++ + V V ++ +EYKR+QA Sbjct: 473 TDQEKLPPYEILDEILKLYIEEGLDPEEIALKG---FDKKMVVEVTEMVRKNEYKRKQAA 529 Query: 534 VGTKITAKSFGRDRLYPISNKFRDHI 559 +GTKI+ ++FG+D PI+N+FR+ + Sbjct: 530 IGTKISTRAFGKDWRMPITNRFREPL 555 >gi|302036712|ref|YP_003797034.1| NAD(+) synthase (glutamine-hydrolyzing) [Candidatus Nitrospira defluvii] gi|300604776|emb|CBK41108.1| NAD(+) synthase (glutamine-hydrolyzing) [Candidatus Nitrospira defluvii] Length = 589 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/596 (37%), Positives = 327/596 (54%), Gaps = 48/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L+IA+AQ+NP VGDIAGN + +EA R DL+ F EL ++GYPPEDL+FK Sbjct: 1 MRPLRIAMAQINPTVGDIAGNTRLIQTWIKEARRAKADLVAFPELAVTGYPPEDLLFKPR 60 Query: 62 FIQACSSAIDTLKSDTHDG--------------GAGIVVGFPRQDQEGVLNSVVILDAGN 107 FI+ A+ + ++ A FP + + N +L Sbjct: 61 FIEDTQRALKAVAAEARGLVVVVGYVGQGATAVSASEAPSFPLAGRHELYNEAAVLSDRR 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 I+A K +LPNY F E R F G +V +G+ ICEDIW + + G Sbjct: 121 ILATYRKRHLPNYGVFDESRYFHPGSRLPLLVLNGATIGVNICEDIWFSDGPTRLQASAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 AE + ++NASP++ K + R +++ + + + Y N VGGQDEL+FDG S D Sbjct: 181 AEVIVNINASPFHVGKGRMREQVLATRARENRVIVTYTNTVGGQDELVFDGCSMIVDQAG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQ----QLSQWNY-----------------MSDDSASTMY 266 ++ + K F + + + +L+Q + + ++ Sbjct: 241 EIVGRGKAFEQDLIVADLDVAAVGRVRLAQGRRKPLPPRVAALIDRVDVRLPARKSQSVV 300 Query: 267 IP-----LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 +P L + Y A VL ++DYV+KN F +V+IGLSGG+DSA+ A IAVDALG ENV Sbjct: 301 VPDLEPPLGRLDEAYRALVLGVQDYVRKNGFKRVVIGLSGGVDSAITAVIAVDALGAENV 360 Query: 322 QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + +P YTS S ED A A+ L + D L I + + + + EN Sbjct: 361 LGVFMPSPYTSRASREDVADMARRLHIQVDTLSITATFKSYLRALGRSFKGRRPDTTEEN 420 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +Q+RIRGN+LMA SN ++LTT NKSE+SVGY TLYGDM+GGF +KD+ KT V++L+ Sbjct: 421 LQARIRGNLLMAYSNKFGHLVLTTGNKSEMSVGYATLYGDMAGGFAVIKDVPKTMVYELS 480 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 RN +GP+ VIP +LE++P+AELRP Q D++SLPPY ILD I+K VE + Sbjct: 481 HMRNL------VGPV-PVIPKRVLERAPTAELRPDQKDEDSLPPYAILDPILKAYVEEDR 533 Query: 502 SFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + + ++ ETV V L+ SEYKRRQAP+G KIT ++FG+DR PI+N +R Sbjct: 534 ALEDITAMGFDRETVARVIALVDRSEYKRRQAPLGIKITHRAFGKDRRMPITNGYR 589 >gi|157364390|ref|YP_001471157.1| NAD+ synthetase [Thermotoga lettingae TMO] gi|157314994|gb|ABV34093.1| NAD+ synthetase [Thermotoga lettingae TMO] Length = 582 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 236/588 (40%), Positives = 334/588 (56%), Gaps = 42/588 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++ +AQ+N VGDI GN+ K E A + +D++ F EL I+GYPPEDL+FK+ Sbjct: 1 MNTLRVGLAQINSTVGDIEGNVEKILEKLELAQQFSVDVVAFPELVITGYPPEDLLFKRH 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI A++ + VVGF ++ + + N+ +L+ G+I+AV K LPNY Sbjct: 61 FIDQNKKALEKIAKYVPKSMIA-VVGFVDENSD-IFNAAAVLNNGSIVAVYRKNYLPNYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F G I F + R+G+ ICEDIW + G A L ++++SPY+ Sbjct: 119 VFDEFRYFQHGDKALVISFCNARIGVTICEDIWYPGGPARIEALLGDAHLLLNISSSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL + ++ + + I YVN VGGQDELIFDGAS + Q ++ + K F E++ Sbjct: 179 SGKLSWKERMLAVRANDNLAAIAYVNLVGGQDELIFDGASLIVNEQGEIISRAKQF-EED 237 Query: 241 FM-----------TEWH----------YDQQLSQWNYMS---------DDSASTMYIPLQ 270 F+ + H + Q++++ N ++ D S + PL Sbjct: 238 FLIGDIDLVGIERSRLHDPRRRQDKRVWSQEIAKLNIVNIPFEPIENKPDIKSRIENPLP 297 Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 Y+A VL RDY++KN V+IGLSGGIDSAL IAVDALG ++V + +P Y Sbjct: 298 RVAEVYHALVLGTRDYLKKNGIKNVVIGLSGGIDSALTCCIAVDALGPDHVTGVSMPGPY 357 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 +S SLEDA AK L +Y V+PI+++ F + + P + ENIQ+RIRG I Sbjct: 358 SSTHSLEDAELLAKNLNIRYLVIPINEIYETFLKSLKPVFGDLPFDVAEENIQARIRGVI 417 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMALSN ++LTT NKSE S GY TLYGD +GGF LKD+YKT V++L+ + N Sbjct: 418 LMALSNKFGWLVLTTGNKSESSTGYCTLYGDTAGGFAVLKDVYKTLVYELSEYVNQKA-- 475 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 E+IP + EK PSAELR Q DQ+ LPPYP+LD I+K VE++ S Sbjct: 476 -----QKEIIPQRVFEKPPSAELRFGQVDQDKLPPYPLLDSILKAYVEDDRSVSEIVPAG 530 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 Y++ TVR V ++ SEYKRRQ G KIT ++FG+DR PI+N+FR+ Sbjct: 531 YDETTVRKVAWMVDSSEYKRRQLAPGPKITYRAFGKDRRLPITNQFRE 578 >gi|255019805|ref|ZP_05291881.1| NAD synthetase / Glutamine amidotransferase chain of NAD synthetase [Acidithiobacillus caldus ATCC 51756] gi|254970734|gb|EET28220.1| NAD synthetase / Glutamine amidotransferase chain of NAD synthetase [Acidithiobacillus caldus ATCC 51756] Length = 548 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/553 (41%), Positives = 319/553 (57%), Gaps = 18/553 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQ N VGD+AGN+ + R A G +L++ EL + GYPPEDL+ + F+ Sbjct: 1 MRIAIAQCNLWVGDVAGNVRRLLREAGAAREAGAELLITPELALCGYPPEDLLLRDDFLD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C++ ++ L T ++VG P++ + N+ ++ G I+A K LPNY F Sbjct: 61 CCATGLEDLARRTP---LPLLVGHPQRHGGALFNAASLVQEGRIVASYHKHCLPNYRVFD 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F +G + + +G+LICEDIW + + + GAE + LNASPY+ K Sbjct: 118 ELRYFRAGQQAVVLPLGGVLVGVLICEDIWCDEDALTACQALGAEVVVVLNASPYHRGKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R E++ + H LP++Y N VGGQDEL+FDG SF D + ++ + FSE + + Sbjct: 178 REREELLVRRARHARLPLVYANAVGGQDELVFDGGSFAVDAEGRICGRAPQFSEDLLLLD 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 S +A PL++ Y A +L LRDYV+KN F V++GLSGG+D Sbjct: 238 LERSSTGSVVVRGGVTAA-----PLEDLAEVYGALMLGLRDYVEKNGFPGVVLGLSGGVD 292 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIA DALG E V +++P YT+ S+EDA A A LG + +LPIH L + + Sbjct: 293 SALTLAIAADALGPERVDALIMPSPYTADMSIEDARAEAATLGVRSHLLPIHGLFAEYQN 352 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + + EN+Q+RIR +LMA SN +LLTT NKSE +VGY TLYGDM+G Sbjct: 353 SLRETFAGRAADTTEENLQARIRAALLMAFSNKFGPLLLTTGNKSETAVGYSTLYGDMAG 412 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF +KD KT ++ LA +RN G GP IP +L ++P+AEL P QTDQ+SLP Sbjct: 413 GFALIKDCPKTLIYALARYRN------GRGP---AIPERVLTRAPTAELAPGQTDQDSLP 463 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP LD II VE + S + TV V L+ +EYKRRQ G +I+ SF Sbjct: 464 PYPELDAIITAYVEEDRSLAEIVAAGHAPATVERVLRLVQMAEYKRRQGAPGVRISRLSF 523 Query: 544 GRDRLYPISNKFR 556 G+DR YPI+N FR Sbjct: 524 GKDRRYPITNGFR 536 >gi|134094248|ref|YP_001099323.1| NAD synthetase [Herminiimonas arsenicoxydans] gi|133738151|emb|CAL61196.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Herminiimonas arsenicoxydans] Length = 537 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 232/557 (41%), Positives = 323/557 (57%), Gaps = 26/557 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF-I 63 +K+AIAQ+N VGD+AGN AK A QG D++L EL + GYPPEDL+ ++SF Sbjct: 3 VKVAIAQINSTVGDLAGNRAKIAEFSRRAAEQGADIVLTPELSLVGYPPEDLLLRQSFYA 62 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 ++ + +VVG P + N+ +L G I A K +LPN + F Sbjct: 63 KSAQALDALAADLAELKNLHVVVGHPFEKDGQRFNAASVLLNGKISATYCKHDLPNATVF 122 Query: 124 HEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EKR F S + +VF + +R GI ICED W GA+ L N SPY+ Sbjct: 123 DEKRYFSS--CDQAVVFDVKGVRFGINICEDTW-FPQAPARAAAAGAQVLLVPNGSPYHM 179 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 NK R +++ ++ + ++Y N VG QDELIFDG SF D + Q++H E Sbjct: 180 NKQHVRIDVMHANVTTHGMSLVYANLVGAQDELIFDGNSFVLDQAGETRAQLQHCVEDLQ 239 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + E+ Q L T+ E Y A VL +RDY+ KN F +IG+SG Sbjct: 240 IVEFRGGQPLD----------GTIVEEPSVEAQVYKALVLGVRDYIGKNGFPGALIGMSG 289 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 G+DSAL A+AVDALG + V+TIM+P YT+ SL D+ + +G +YD + I+D Sbjct: 290 GVDSALTLAVAVDALGADKVRTIMMPSPYTAEISLLDSRDMVQRVGVRYDEIGINDCFEA 349 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F ++ + P ENIQ+RIRG ILMALSN A++LTT NKSE++VGY TLYGD Sbjct: 350 FNRTLANEFKGLPEDATEENIQARIRGTILMALSNKHGAIVLTTGNKSEMAVGYCTLYGD 409 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF LKD+ KT V++L ++RNS +++VIP IL ++PSAELRP QTDQ+ Sbjct: 410 MAGGFAVLKDIAKTLVYRLCAYRNS---------VSDVIPERILTRAPSAELRPGQTDQD 460 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY ILD I++ +E +S + Y E V + HL+ +EYKRRQ+PVG ++T Sbjct: 461 SLPPYDILDAIMQMYMEENQSGADIIAAGYRAEDVARITHLIKINEYKRRQSPVGIRVTH 520 Query: 541 KSFGRDRLYPISNKFRD 557 ++FGRD YPI++KFR+ Sbjct: 521 RAFGRDWRYPITSKFRE 537 >gi|187929635|ref|YP_001900122.1| NAD synthetase [Ralstonia pickettii 12J] gi|309781599|ref|ZP_07676333.1| phenylalanyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] gi|187726525|gb|ACD27690.1| NAD+ synthetase [Ralstonia pickettii 12J] gi|308919574|gb|EFP65237.1| phenylalanyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 545 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/566 (40%), Positives = 328/566 (57%), Gaps = 36/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A+AQ+N VGD AGN A+ A EA++ G ++L EL ++GYPPEDL+ + +FI Sbjct: 3 VSVALAQINCTVGDFAGNAARIVAAAREAHQAGARILLTPELSLTGYPPEDLLLRPAFID 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQE----GVL----NSVVILDAGNIIAVRDKI 115 A + A+D L ++ G +++G P+ E GVL NS + G ++ DK+ Sbjct: 63 ASARALDALIAELAAFPGLHVLIGHPQLSLEAPAPGVLPKPTNSATVALDGRVVGRYDKL 122 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 LPN F EKR F G +P VF R G++ICED W + L Sbjct: 123 ELPNNEVFDEKRYFQPG--TEPFVFEVDGTRFGVIICEDAWYATATAYAKAAGAQVVLIP 180 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 NASPY+ +K R I+ ++ LP +Y N VGGQDEL+FDG SF D + + +M Sbjct: 181 -NASPYHLDKEDLRERIIGARVKESGLPHVYANLVGGQDELVFDGGSFVLDAEGNVVLRM 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNF 292 F E ++ + L +P EA Y A L +RDY+ KN F Sbjct: 240 GQFVEGVGYVQFDGGRALP-----------GTIVPEPPLEAQVYEALKLGVRDYLGKNGF 288 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD Sbjct: 289 PGAIIGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAARLGVQYDE 348 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + I + + F +++ + P ENIQ+RIRG +LMALSN S ++LTT NKSEI+ Sbjct: 349 IAISPMFDAFKGALAEEFRGLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEIA 408 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGDM+GGF +KD++KT V++L +RNS L+EVIP IL ++PSAE Sbjct: 409 VGYCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNS---------LSEVIPERILTRAPSAE 459 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LR +QTDQ+SLP Y LD I++R +E + + + + V+ + L+ +EYKRRQ Sbjct: 460 LRENQTDQDSLPEYDALDAIVQRYMEQNQPVADIIAAGFAEADVQKIVRLIKINEYKRRQ 519 Query: 532 APVGTKITAKSFGRDRLYPISNKFRD 557 APVG ++T ++FGRD YPI+++F++ Sbjct: 520 APVGIRVTPRAFGRDWRYPITSRFKE 545 >gi|73748831|ref|YP_308070.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides sp. CBDB1] gi|73660547|emb|CAI83154.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides sp. CBDB1] Length = 566 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 229/575 (39%), Positives = 331/575 (57%), Gaps = 34/575 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A ++A G D+I F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIVSHVQKARSLGADVIAFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ A+D + + G ++VG+ +G+ N+ I+ G++I KI LPNY Sbjct: 61 FVEENLQALDAVIKASQ--GITVIVGY-VDSHDGLRNAAAIIHNGSLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +++G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFLPGNRCPVYTICGLQVGVNICEDIWFTSGPSTAQANKGAELIINISASPYHF 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSDRARENRVYIAYTNMVGGQDELVFDGASDVFDYNGNLLIRGKQFQEDLV 237 Query: 242 MTEWHYDQQLSQWN---------YMSDDSASTM--------YIPLQEEEADYNACVLSLR 284 + + Q + ++S T+ + PL+ + Y A +L R Sbjct: 238 VLDLDIPVLPRQADTNANVPDSIFVSSAGFETLKPPIENIAFTPLEADAEVYQALLLGTR 297 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F KV+IGLSGGIDS+L A IA DALG ENV +++P +Y+S S+ D+ A Sbjct: 298 DYINKNGFKKVVIGLSGGIDSSLVATIAADALGPENVVGVIMPSRYSSEGSISDSLHLAG 357 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG K +PI L F + +S + ENIQ+RIRGN+LMALSN ++L Sbjct: 358 NLGIKTLQIPIDPLFQSFLNTLSDVFAGTEANTTEENIQARIRGNLLMALSNKFHWLVLN 417 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNKSE ++GY TLYGDM+GGF +KD+ K V++L RN +G ++IP ++ Sbjct: 418 TSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLVHNRNK---LAGF----DLIPNNV 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEH 520 L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S DQ + + V+ V Sbjct: 471 LAKPPSAELKPNQLDTDSLPPYEVLDPILEAYVEQDKSI---DQIVALGFAADIVKRVVK 527 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 528 MVDRSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|241764805|ref|ZP_04762812.1| NAD+ synthetase [Acidovorax delafieldii 2AN] gi|241365682|gb|EER60394.1| NAD+ synthetase [Acidovorax delafieldii 2AN] Length = 552 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 234/566 (41%), Positives = 329/566 (58%), Gaps = 31/566 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I AQLN VVGD+ GN K A +A+ QG L+L EL + GY EDL + +F+ Sbjct: 3 FSICTAQLNFVVGDMPGNAQKIIAAARQAHAQGARLLLTPELAVCGYAAEDLFLRPAFMA 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQ------EGVLNSVVILDAGNIIAVRDKINL 117 AC A+ T+ +T G IV+G P++ LN+ +L G + K L Sbjct: 63 ACDDAVKTVARETAGLNGLVIVLGHPQKRTPADPAFSACLNAASVLRHGKVEQTYAKHEL 122 Query: 118 PNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 PNY F E+R F++G S P VF +++G+LICED W S + + GA+ L +N Sbjct: 123 PNYQVFDERRYFVAGQS--PCVFDVEGVKVGLLICEDAW-FSEPARAAAQAGAQLLAVIN 179 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASP++ K +R + + +++ LP++Y + VGGQDE++F+G SF + +A + Sbjct: 180 ASPFHLGKSAEREQTMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALNADGSVAARAPG 239 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHK 294 F E+ + Q + + P + EAD ++A VL +RDYV KN F Sbjct: 240 FQEKLVFAQIGRAQDAIKIEAEIE--------PERSLEADLWDALVLGVRDYVGKNGFPG 291 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++GLSGGIDSAL AIAVDALG + V+T+M+P YT+ S DA A +G +YD + Sbjct: 292 ALLGLSGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAARMGVRYDEIS 351 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I F + ++ P EN+Q+RIRG +LMALSN A++LTT NKSE++ G Sbjct: 352 IAPQFEAFKAALASEFAGLPEDTTEENLQARIRGTLLMALSNKFGAIVLTTGNKSEMATG 411 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAEL 473 Y TLYGDM+GGF P+KD+ KT+VF LA WRN++ +G P IP I+ + PSAEL Sbjct: 412 YCTLYGDMAGGFAPIKDVAKTRVFALARWRNANDPYGTGASP----IPERIITRPPSAEL 467 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 RP Q DQ+SLP Y +LD I+ R +EN+ ES I E D V V L+ +EYKRR Sbjct: 468 RPDQKDQDSLPAYEVLDAIVARYMENDEPIESIIAAGYERAD--VERVTRLIKLNEYKRR 525 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QAPVG ++T +SFG+D YPI++KFR Sbjct: 526 QAPVGVRVTRRSFGKDWRYPITSKFR 551 >gi|152979996|ref|YP_001352840.1| NAD synthetase [Janthinobacterium sp. Marseille] gi|151280073|gb|ABR88483.1| NAD+ synthase (glutamine-hydrolysing) [Janthinobacterium sp. Marseille] Length = 537 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/557 (40%), Positives = 326/557 (58%), Gaps = 26/557 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF-I 63 +K+AIAQ+N VGD+AGN A+ A QG D++L EL + GYPPEDL+ ++SF Sbjct: 3 VKVAIAQINSTVGDLAGNRARIAEFSRRAAEQGADIVLTPELSLVGYPPEDLLLRQSFYA 62 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + + G +VVG P + N+ +L G + K +LPN + F Sbjct: 63 KTTETLLALAADLAPLHGLHVVVGHPFEQDGQRYNAASVLLNGKVAGTYCKHDLPNATVF 122 Query: 124 HEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EKR F S ++P+VF + +R GI ICED W + + GA+ L N SP++ Sbjct: 123 DEKRYFTS--VDEPLVFEVKGVRFGINICEDTW-FPHAPARAAEAGAQVLLVPNGSPFHM 179 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 NK R +++ ++ + ++Y N VGGQDELIFDG SF D ++ Q++H E Sbjct: 180 NKQHLRVDVMHANVTVHGMSLVYANLVGGQDELIFDGNSFVLDQAGEIRAQLQHCVEDLQ 239 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + E+ Q + T+ L E Y A VL +RDY+ KN F +IG+SG Sbjct: 240 IIEFQGGQPVD----------GTIVEELSVEAQVYKALVLGVRDYIGKNGFPGALIGMSG 289 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 G+DSAL A+AVDALG + V+ IM+P YT+ S D+ K +G +YD + I+D Sbjct: 290 GVDSALTLAVAVDALGADKVRAIMMPSPYTAEISWVDSRDMVKRVGVRYDEIGINDCFEA 349 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F ++ + ENIQ+RIRG ILMALSN A++LTT NKSE++VGY TLYGD Sbjct: 350 FNRTLANEFKGLKQDTTEENIQARIRGTILMALSNKHGAIVLTTGNKSEMAVGYCTLYGD 409 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF LKD+ KT V++L ++RN +++VIP IL ++PSAELRP QTDQ+ Sbjct: 410 MAGGFAVLKDIAKTLVYRLCAYRNI---------VSDVIPERILTRAPSAELRPDQTDQD 460 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LD I++ +E +S + Y E V + HL+ +EYKRRQ+PVG ++T Sbjct: 461 SLPPYEVLDAIMQMYMEENQSGVEIIAAGYRPEDVARITHLIKINEYKRRQSPVGIRVTH 520 Query: 541 KSFGRDRLYPISNKFRD 557 ++FGRD YPI++KFR+ Sbjct: 521 RAFGRDWRYPITSKFRE 537 >gi|317121464|ref|YP_004101467.1| NH(3)-dependent NAD(+) synthetase [Thermaerobacter marianensis DSM 12885] gi|315591444|gb|ADU50740.1| NH(3)-dependent NAD(+) synthetase [Thermaerobacter marianensis DSM 12885] Length = 617 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 230/615 (37%), Positives = 335/615 (54%), Gaps = 68/615 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IAIAQ+N VGD+ GN K EA R G DL++F EL ++GYPPEDL+F+ +F+ Sbjct: 9 LRIAIAQVNSTVGDLEGNARKLAAFAAEAARAGADLVVFPELALTGYPPEDLIFRPAFLA 68 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L G +V GF +D++ + N+ +L G + AV K LPNY F Sbjct: 69 ESGRWLQWLAGQLAAGPVALV-GFVHRDRD-LYNAAAVLQGGRVRAVACKRFLPNYGVFD 126 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK-KQGAEFLFSLNASPYYHNK 183 E+R F G+ + + LG+ ICED+W + GAE L +L+ASPY+ K Sbjct: 127 EERYFAPGHRALVLRLAGVTLGVSICEDLWYPEGPTREQALAGGAEILVNLSASPYHAGK 186 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++R ++ + + + + I+Y N VGGQDEL+FDG S ++A + + F+E + Sbjct: 187 PRERESLMVTRATDLGVAIVYANLVGGQDELVFDGNSLVVTAAGEVAARGRPFAEDLIL- 245 Query: 244 EWHYDQQLS--------QWNYM---SDDSASTMYIPLQ---------------------- 270 W YD + + +W +M ++A + L Sbjct: 246 -WDYDPEAAAVARWHEPRWRHMPATEQEAARVERVDLDGAAAGGAAPGPATGGATAQAVE 304 Query: 271 ---------------------EEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 E EA+ Y A VL++RDY KN + +GLSGGIDSAL Sbjct: 305 PAGGGPRPPKPPLPPRQVEVLEGEAEIYAALVLAVRDYFGKNRIGRAWLGLSGGIDSALV 364 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A +A DALG E V + +P +TS +SL+DA A A+ LG + +PI + + F ++ Sbjct: 365 ACLAADALGPERVTGVRMPSPFTSEESLQDAEAVARNLGIGLETIPIAGVFDAFRQALAP 424 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + EN+Q+RIRG +LMAL+N ++L T NKSE++ GY TLYGDM+GGF P Sbjct: 425 LFGGRSFDVAEENLQARIRGTLLMALANKFGGIVLATGNKSELATGYATLYGDMAGGFAP 484 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPI 488 LKD+ KT V++LA++RN P VIP S+L K+P+AELRP Q D++SLPPY + Sbjct: 485 LKDVPKTLVYRLAAYRNGW-------PGGPVIPESVLRKAPTAELRPGQKDEDSLPPYAV 537 Query: 489 LDDIIKRIVENE-ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDR 547 LD I++ VE + + + + V HL+ SEYKRRQA G KIT ++FGRDR Sbjct: 538 LDPILEAYVEKDVPAATLVARGHPAGAVARAVHLVRASEYKRRQAAPGPKITTRAFGRDR 597 Query: 548 LYPISNKFRDHISEE 562 YPI+N FR+ + +E Sbjct: 598 RYPITNGFREPVPQE 612 >gi|299066056|emb|CBJ37237.1| putative nh3-dependent nad+ synthetase (nadE) [Ralstonia solanacearum CMR15] Length = 565 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/568 (39%), Positives = 325/568 (57%), Gaps = 43/568 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 24 VALAQINCTVGDLAGNAARIVAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLDAA 83 Query: 67 SSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV---------LNSVVILDAGNIIAVRDKIN 116 S A+D L ++ G +++G P+ E N+ + G ++ K+ Sbjct: 84 SRALDALVAELAAFAGLHVLIGHPQLLFEAPAPGSALPKPTNTATVAVDGRVLGQYHKLE 143 Query: 117 LPNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPN F EKR F G +P VF R G+++CED W L Sbjct: 144 LPNNEVFDEKRYFQVG--GEPFVFDVEGTRFGVIVCEDAWYPQATAWAKAAGAQVVLIP- 200 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + A +M Sbjct: 201 NASPYHLDKEDLREQIIGARVQESGLPHVYVNLVGGQDELVFDGGSFVLDAHGKPAVRMA 260 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTM---YIPLQEEEAD-YNACVLSLRDYVQKN 290 F E Y+ D A + P EA Y A L +RDY+ KN Sbjct: 261 QFVEG--------------VGYVRFDGARPLPGEIAPEATLEAQVYEALKLGVRDYIGKN 306 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA LG +Y Sbjct: 307 GFPGAIIGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWLDARDMVARLGVRY 366 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 D LPI + + F +S+ ++ P ENIQ+RIRG +LMALSN S ++LTT NKSE Sbjct: 367 DELPIMPMFDAFRGALSEEFRDLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSE 426 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PS Sbjct: 427 MAVGYCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPS 477 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELR +QTDQ+SLP Y LD I++R +E + + + V+ + L+ +EYKR Sbjct: 478 AELRENQTDQDSLPEYDALDAIVQRYMEQNQPVAEIIAAGFAEADVQKIVRLIKINEYKR 537 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFRD 557 RQAPVG ++T ++FGRD YPI+++F++ Sbjct: 538 RQAPVGIRVTQRAFGRDWRYPITSRFKE 565 >gi|149176976|ref|ZP_01855585.1| NAD+ synthetase [Planctomyces maris DSM 8797] gi|148844231|gb|EDL58585.1| NAD+ synthetase [Planctomyces maris DSM 8797] Length = 558 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 232/572 (40%), Positives = 340/572 (59%), Gaps = 38/572 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLNP VGD++GN K A + G+DL+LF EL + GYPP+D++ ++ FI+ Sbjct: 1 MKIALAQLNPTVGDLSGNCQKILETVNRAEQSGVDLVLFPELVLCGYPPKDILLREGFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP--RQDQEG-VLNSVVILDAGNIIAVRDKINLPNYS 121 AC A+D L + + G+V+G P R +G + N+ +L G I + K+ LPNY Sbjct: 61 ACDHAVDRLAAQLNPD-IGVVIGHPTGRDLPQGRIANAASLLFQGKIDSQIHKLLLPNYD 119 Query: 122 EFHEKRTFISGYSND--PIVFRDIRLGILICEDIWKNS-------------NICKHLKKQ 166 F E+R F P+ FR+++LG+ ICED W + K L + Sbjct: 120 VFDEQRYFRHADLKQIKPVSFRELKLGLHICEDAWWGQADTFYHNQPFELPDPVKILAEA 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 G++ L +++ASP+ +K K+R EIV +P ++VNQVGG D+L+FDG SF D Sbjct: 180 GSDLLVNISASPFEIDKRKRRGEIVGAHRDRYSIPYLFVNQVGGNDDLVFDGHSFVMDAA 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 L QM F E + + Q + + SDD L EE + A VL LRDY Sbjct: 240 GDLVLQMPGFRED--LQFYETGQSVDRGPGESDD--------LSREEQLFEALVLGLRDY 289 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +QK F ++GLSGGIDSAL AIA +A+G E V ++LP +Y+S S+ D+ A+ L Sbjct: 290 IQKCGFTDCVLGLSGGIDSALACAIAAEAIGPERVHALLLPSRYSSDHSVADSLELAENL 349 Query: 347 GCKYDVLPIHDLVNHFFSL--MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 G Y+ +PI + F +L + L+ EP+G+ +N+Q+RIRG +M SN M L Sbjct: 350 GLDYETIPIDSVHLAFENLPVIGDDLKLEPAGLADQNLQARIRGANVMVRSNQHGWMALA 409 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE+++GY TLYGDM+GGF L D++K V+++A + N G + VIP +I Sbjct: 410 TGNKSELAMGYCTLYGDMAGGFAVLSDVFKCDVYRVARYVNQRA-----GRI--VIPENI 462 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYG 524 LEK+PSAEL P+Q DQ+SLPPY +LD I+K ++E+E S + +EY ETVR+V L Sbjct: 463 LEKAPSAELAPNQVDQDSLPPYDLLDGILKGLIEDERSVKSLSKEYPPETVRWVAGRLDR 522 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +E+KRRQ P G K++A++FG R P++ +F+ Sbjct: 523 NEFKRRQMPPGIKLSARAFGSGRRMPMAARFQ 554 >gi|17547066|ref|NP_520468.1| NAD synthetase [Ralstonia solanacearum GMI1000] gi|17429367|emb|CAD16054.1| probable nh3-dependent nad+ synthetase signal peptide protein [Ralstonia solanacearum GMI1000] Length = 546 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 227/568 (39%), Positives = 326/568 (57%), Gaps = 43/568 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNAARIVAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLDAA 64 Query: 67 SSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV---------LNSVVILDAGNIIAVRDKIN 116 S A+D L ++ G +++G P+ E N+ + G ++ K+ Sbjct: 65 SRALDALVAELAAFAGLHVLIGHPQLLFEAPAPGSALPKPTNTATVAVDGRVLGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPN F EKR F G +P VF R G+++CED W L Sbjct: 125 LPNNEVFDEKRYFQVG--GEPFVFDVEGTRFGVILCEDAWYPKATAWAKAAGAQVVLIP- 181 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + A +M Sbjct: 182 NASPYHLDKEDLREQIIGARVQESGLPHVYVNLVGGQDELVFDGGSFVLDAHGKPAARMA 241 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTM---YIPLQEEEAD-YNACVLSLRDYVQKN 290 F E Y+ D A + P EA Y A L +RDY+ KN Sbjct: 242 QFVEG--------------VGYVRFDGARPLPGEIAPEATLEAQVYAALKLGVRDYIGKN 287 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +Y Sbjct: 288 GFPGAIIGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWLDARDMAARLGVRY 347 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 D LPI + + F +++ ++ P ENIQ+RIRG +LMALSN S ++LTT NKSE Sbjct: 348 DELPIMPMFDAFRGALAEEFRDLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSE 407 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PS Sbjct: 408 MAVGYCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPS 458 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELR +QTDQ+SLP Y LD I++R +E + + + V+ + L+ +EYKR Sbjct: 459 AELRENQTDQDSLPEYDALDAIVQRYMEQNQPVAEIIAAGFAEADVQKIVRLIKINEYKR 518 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFRD 557 RQAPVG ++T ++FGRD YPI+++F++ Sbjct: 519 RQAPVGIRVTQRAFGRDWRYPITSRFKE 546 >gi|326316969|ref|YP_004234641.1| NAD+ synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373805|gb|ADX46074.1| NAD+ synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 550 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 234/562 (41%), Positives = 327/562 (58%), Gaps = 29/562 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQ N +VGD+ GN K A EA+ QG L+L EL + GY EDL + +F+ AC Sbjct: 5 ISIAQFNFIVGDVEGNARKIISAAHEAHAQGAALLLTPELALCGYAAEDLFLRPAFLDAC 64 Query: 67 SSAI-DTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNYS 121 A+ D ++ + G +VVG P + G N+ +L G I K LPNY+ Sbjct: 65 DRALQDIAQATSACGDLAVVVGHPWRSVAGGAERCHNAASVLRGGRIEQTYAKQELPNYA 124 Query: 122 EFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E+R F G P VF + +R+G+LICED W + + A+ L +LNASP+ Sbjct: 125 VFDEQRYFDPG--TQPCVFDVQGVRVGLLICEDAWFPGPAARAAQAG-AQLLATLNASPF 181 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K +R +I+ +++ LP++Y + VGGQDE++F+G SF D + + F+E Sbjct: 182 HLGKSAEREQIMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALDANGFVGVRAPGFTEA 241 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIG 298 H + ++ D A P+ EAD ++A VL +RDYV KN F V++G Sbjct: 242 LVRVVAHAGDGVLRFE---PDVA-----PIPAPEADLWSALVLGVRDYVGKNGFPGVLLG 293 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AIAVDALG + V+ +M+P YT+ S DA A+ LG +YD + I Sbjct: 294 LSGGIDSALVLAIAVDALGADKVRAVMMPSPYTADISWIDARDMAERLGVRYDEIAIAPQ 353 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + ++ EN+Q+RIRG +LMALSN +++LTT NKSE++ GY TL Sbjct: 354 FEAFKAALASEFAGRAEDATEENLQARIRGTLLMALSNKFGSVVLTTGNKSEMATGYCTL 413 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 YGDM+GGF +KD+ KT V+ LA WRN+H +G P IP I+ + PSAELRP Q Sbjct: 414 YGDMAGGFAVIKDVAKTAVYGLARWRNAHDPFGTGASP----IPERIITRPPSAELRPDQ 469 Query: 478 TDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 DQ+SLPPY +LD I+ R +EN+ ES I Y V V L+ +EYKRRQAPV Sbjct: 470 KDQDSLPPYDVLDAIVGRYMENDEPIESIIAAG--YARADVERVTRLIQVNEYKRRQAPV 527 Query: 535 GTKITAKSFGRDRLYPISNKFR 556 G ++T +SFG+D YPI+N+FR Sbjct: 528 GIRVTRRSFGKDWRYPITNRFR 549 >gi|206602425|gb|EDZ38906.1| NAD+ synthase [Leptospirillum sp. Group II '5-way CG'] Length = 592 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 233/602 (38%), Positives = 335/602 (55%), Gaps = 57/602 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++KLK+A+AQ NP+VGDI+GN+A + +A + +D+++F EL ++GYPPEDL+ K S Sbjct: 1 MRKLKLALAQTNPIVGDISGNLAHIKDMIVQARSEHVDVVVFPELALTGYPPEDLLLKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI A+D L + ++VGF + Q+ + N+ +L G + + K LPNY Sbjct: 61 FIDKNLRALDELLGFAPE--LLVLVGFVDR-QDDIYNAAAVLHGGKLHGIYRKQYLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F G + + +R RLGI ICEDIW G AE + +L+ASP++ Sbjct: 118 VFDENRYFQEGVESPVLEYRSARLGINICEDIWYPKGPLYTQTLMGDAECILNLSASPFH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R ++ + I YVN VGGQDEL+FDG S ++ + K F E Sbjct: 178 AGKREVRENMLCTRAVDSACYIAYVNMVGGQDELVFDGQSLVISPDGEIESRGKAFQEDL 237 Query: 241 FMTE-----------------------------WHYDQQLSQWNY----MSDDSASTM-- 265 +TE W+ D L +W S T+ Sbjct: 238 LITEIDLDHVFRVRLHDPRRRKDRLSQSLDRPQWNQDDVLVRWKIEEPGRRQASGGTLPE 297 Query: 266 ---------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 PL Y A V +RDYV+KN+F +V++GLSGGIDSAL AAIA DAL Sbjct: 298 KKVLVKSPYTQPLDRLAEIYEALVTGVRDYVRKNSFREVLVGLSGGIDSALVAAIATDAL 357 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 G E+V + +P +TS +S ED + L + + +PI F ++S Q+ P Sbjct: 358 GPEHVHGLFMPSMFTSQESYEDVLKLSGTLKVQVETIPIAAAFEQFLQILSPHFQDRPRD 417 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 EN+QSRIRG +LMALSN ++LTT NKSE+SVGY TLYGDM+GGF+ LKD+ KT Sbjct: 418 TAEENLQSRIRGLLLMALSNKFHWLVLTTGNKSEMSVGYQTLYGDMAGGFSVLKDVPKTL 477 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 V+ LA + N+ ++IP I+EK+P+AELRP+Q D +SLPPY ILD I++ Sbjct: 478 VYDLADFLNTRR--------ADIIPHRIIEKAPTAELRPNQKDLDSLPPYEILDPIMEAY 529 Query: 497 VENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 VE+++ F + ++ TV V L+ SEYKRRQ+P G K+T ++FG+D PI+N+F Sbjct: 530 VEDDQGFEEIIGKGFDPATVARVLSLIDKSEYKRRQSPPGIKLTLRAFGKDWRVPITNRF 589 Query: 556 RD 557 ++ Sbjct: 590 KE 591 >gi|254497097|ref|ZP_05109918.1| glutamine dependent NAD+ synthetase [Legionella drancourtii LLAP12] gi|254353677|gb|EET12391.1| glutamine dependent NAD+ synthetase [Legionella drancourtii LLAP12] Length = 525 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 233/552 (42%), Positives = 322/552 (58%), Gaps = 31/552 (5%) Query: 9 IAQLNPVVGDIAGNIAKARR--AREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +AQ NP VGD+ N A+ +++A+ DLI+F EL ++GYPPEDL+F+K F QA Sbjct: 1 MAQTNPTVGDLTANRAQIIEIIKKKQADH---DLIIFPELALTGYPPEDLLFRKEFHQAV 57 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 S + +++ T+D +++G P DQ+ NS+ IL G II K NLPNY F E Sbjct: 58 SENLKQIQAVTND--CYVLIGHPSVDQKNCYNSLSILHDGKIITQYQKQNLPNYEVFDET 115 Query: 127 RTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 R F G N ++ ++ +GI ICED W+ + + L GA + S+NASP+ +K + Sbjct: 116 RYFTPGPKNPCLLNIKNYSIGICICEDAWRLGPV-EDLITNGASIIVSINASPFDISKYQ 174 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW 245 KR ++ H + +IYVNQ+GGQDEL+FDG S D Q + + F E E Sbjct: 175 KRETLLKSHAQH-GVAVIYVNQIGGQDELLFDGQSLAMDHQGTICARAPAFKEDLCTIEI 233 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + +S +A L +E+ Y A V +DYV KN+F V++GLSGGIDS Sbjct: 234 -------EGKKLSGPTAPL----LSKEQLLYEALVCGTKDYVNKNHFPGVLLGLSGGIDS 282 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 AL A+AVDALG E V +++P +YT+ S EDA + LG + +L I N + Sbjct: 283 ALTLAVAVDALGAERVHAVLMPSRYTADISYEDAIKELEILGVSHSLLSIEPAFNTLMTT 342 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + P ENIQ+RIRG +LMA+SN S M+LTTSNKSE +VGY TLYGDM GG Sbjct: 343 LEPVFSGLPMDTTEENIQARIRGLLLMAMSNKSGNMVLTTSNKSESAVGYATLYGDMCGG 402 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 F LKD+ KT+V+ LA +RNS L EVIP ++ ++PSAELR +QTDQ+SLP Sbjct: 403 FGILKDVLKTEVYALARYRNS---------LAEVIPERVITRAPSAELRENQTDQDSLPE 453 Query: 486 YPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 Y +LD II +E S Q+ + E V V L+ +EYKRRQA G KI+ +FG Sbjct: 454 YEVLDAIIVAYMEKNLSPAEIIQQGFKAEDVTRVIQLIKRNEYKRRQAAPGIKISPMAFG 513 Query: 545 RDRLYPISNKFR 556 +D YPI+N F+ Sbjct: 514 KDWRYPITNGFK 525 >gi|297544156|ref|YP_003676458.1| NAD+ synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841931|gb|ADH60447.1| NAD+ synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 543 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 228/565 (40%), Positives = 326/565 (57%), Gaps = 36/565 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINRAKYQKADLVVFPELATVGYPPKDFLFMQDFLK 60 Query: 65 ACSSAIDTLK-SDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSE 122 A I+ + T+ G+++G RQD EG L NS + G I+ V DK LPNY Sbjct: 61 ANEKYINEIVLPATYQ--IGVILGTVRQDTEGNLYNSAFFIYDGKIVEVFDKTLLPNYDV 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEFLF 172 F EKR F F+ I+LG+ ICEDIWK+ ++ + K + Sbjct: 119 FDEKRYFKPAQLRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQYKLKPDIFI 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASPYY K R E++ +I +P IYVNQVG DELIFDG+SF + + + Q Sbjct: 179 NISASPYYLGKQNMRVEMIEKKIKKYAIPFIYVNQVGANDELIFDGSSFVVNEEGKRVVQ 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 +K F E + + + + M +D + YNA VL +RDY +K+ F Sbjct: 239 LKAFEEDIKIVDIDELKNFKELPEMKEDISWV-----------YNALVLGVRDYCKKSGF 287 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A+ LG ++ V Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKSDARILAENLGIEFRV 347 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE++ Sbjct: 348 IPIEPVFESYLSVFNG-DNSAIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +GY TLYGDMSG P+ D+ KT V++LA + N E+IP SI+EK+PSAE Sbjct: 407 MGYCTLYGDMSGSLAPIADVPKTMVYELAKYINRK---------KEIIPISIIEKAPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP+Q D++SLPPY ILD+I+K +E S ++ Y+++ V+ V + + EYKR+Q Sbjct: 458 LRPNQKDEDSLPPYKILDEILKMYIEENRSVKEIVEKGYDEKLVKDVINKVNRVEYKRKQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 A K+T K+FG R PI + F+ Sbjct: 518 AAPVLKVTTKAFGIGRRMPIVHNFK 542 >gi|255318866|ref|ZP_05360092.1| glutamine-dependent NAD+ synthetase [Acinetobacter radioresistens SK82] gi|262378876|ref|ZP_06072033.1| glutamine-dependent NAD+ synthetase [Acinetobacter radioresistens SH164] gi|255304122|gb|EET83313.1| glutamine-dependent NAD+ synthetase [Acinetobacter radioresistens SK82] gi|262300161|gb|EEY88073.1| glutamine-dependent NAD+ synthetase [Acinetobacter radioresistens SH164] Length = 541 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 229/566 (40%), Positives = 330/566 (58%), Gaps = 33/566 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P G+ N K EA +Q D+I+F EL GY EDL+ + S Sbjct: 1 MKSFKIALAQFSPHTGNFELNAQKMVEQANEAKKQRADIIVFPELCTVGYSAEDLLLRPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + + L D +V GF Q + G NS ++ G ++ V +K NLPNY Sbjct: 61 LSKRTQKVFEIL-GQVKD--IVMVFGFVNQAETGQRYNSAAVVKDGQVLGVYNKQNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 S F EKR F SG N +VF + + +LICEDIW + N + L + A+ + LN+SP Sbjct: 118 SVFDEKRYFASG--NQQLVFEYMEHKFAVLICEDIW-SINTVQQLTQLKAQTVLVLNSSP 174 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K + R + + + ++ ++YVNQV GQD++IFDG+SF + Q +L + F E Sbjct: 175 YEVGKPQHRIQTMQQLVKQLNFNLVYVNQVCGQDDIIFDGSSFVLNPQGELVTRAPSFQE 234 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 E+ D+ ++ + + I Y A V++ RDY+Q++ F VI+G Sbjct: 235 CLHYAEYSADKDAFIVQEIAPELDTMAEI--------YQALVMATRDYIQRSGFPGVILG 286 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AIAVDA+G + VQ +M+PY YT+ S+EDAAA AK +G + + I+ + Sbjct: 287 LSGGIDSALTLAIAVDAIGADKVQAVMMPYTYTAQISVEDAAAQAKTMGVTFGIAEINPI 346 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 VN F + F P+ EN+Q+R RG +LMALSN ++L+T NKSE++VGY TL Sbjct: 347 VNGFLQTLYPFFGNSPADTTEENLQARARGTLLMALSNKFGNLVLSTGNKSEVAVGYCTL 406 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE--VIPPSILEKSPSAELRPH 476 YGDM GGF+ LKD+YKT VF+LA +RNS L+E VIP ++ + PSAEL P Sbjct: 407 YGDMVGGFSVLKDVYKTIVFELAKYRNS---------LSEVPVIPERVITRPPSAELSPD 457 Query: 477 QTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 Q DQ+SLPPY ILD I+ +E ++E I + + TV V L+ +EYKRRQ Sbjct: 458 QKDQDSLPPYDILDAILYAYIEEDMSQEDIIA--KGFERATVEKVIKLVDRNEYKRRQGA 515 Query: 534 VGTKITAKSFGRDRLYPISNKFRDHI 559 +G +I++++FGRDR YPI N ++ + Sbjct: 516 IGPRISSRAFGRDRRYPIVNGWKPGV 541 >gi|223935581|ref|ZP_03627497.1| NAD+ synthetase [bacterium Ellin514] gi|223895589|gb|EEF62034.1| NAD+ synthetase [bacterium Ellin514] Length = 545 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/570 (39%), Positives = 322/570 (56%), Gaps = 45/570 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ+N VGD+AGN AK + A G+DL++F EL I+GYPP DL+ KK FI Sbjct: 1 MKVALAQINTTVGDLAGNEAKILAGYQRAVEAGVDLVMFPELTITGYPPRDLLHKKRFIA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ L + + G G++VG+ +++ + + N V +L G I+ R K LP Y Sbjct: 61 ENLEVLNRLAAVS--GKVGMLVGYVTENKTRPGKELSNCVALLQNGKIVESRIKTLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEF 170 F E R F N P+ F +LG+ ICEDIW + N L GA Sbjct: 119 DVFDEDRYFEPANENQPVEFNGTKLGLTICEDIWNDEDFWPERRYRHNPPMELAGAGAGI 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 LF+++ASP+ K + R+ ++ P+++ NQ+GG DELIFDG S F+ + L Sbjct: 179 LFNVSASPWSLGKEETRYNMLRSMAIKSKRPVVFCNQIGGNDELIFDGGSLAFNAEGTLI 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE---EEADYNACVLSLRDYV 287 + F+E F+ D+ S++ +P E EE Y A VL LRDY+ Sbjct: 239 GRGDMFAEDFFVV----------------DTESSVEVPRMEWSAEEFIYKALVLGLRDYL 282 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 K F ++GLSGGIDSAL A IAVDALGKE+V+ + LP +Y+S SL+DA A+ LG Sbjct: 283 HKCGFKSAVLGLSGGIDSALTAVIAVDALGKEHVRGVSLPSQYSSQGSLDDAQILAERLG 342 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 +YDV+PI ++ ENIQ+R+RG LMA+SN A+LLTT N Sbjct: 343 IRYDVVPIQPEFEAVKKQLASVFTGLKEDTTEENIQARLRGVTLMAMSNKFGALLLTTGN 402 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM GG + D+ KT V+Q++ W N E+IP + K Sbjct: 403 KSELAVGYCTLYGDMCGGLAVISDVPKTMVYQISKWINRE---------QEIIPRDTITK 453 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKR-IVENEESFINNDQEYNDETVRYVEHLLYGSE 526 PSAELRP+QTDQ+SLPPY +LD I+ +V+ + + + TV+ V L+ +E Sbjct: 454 PPSAELRPNQTDQDSLPPYEVLDAILDAYVVQGKGMREIIALGFEEPTVKRVIRLIDFNE 513 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 YKRRQA G K+T+K+FG R PI+ K++ Sbjct: 514 YKRRQAAPGLKVTSKAFGVGRRIPIAQKYQ 543 >gi|167038045|ref|YP_001665623.1| NAD+ synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040910|ref|YP_001663895.1| NAD+ synthetase [Thermoanaerobacter sp. X514] gi|300914946|ref|ZP_07132262.1| NAD+ synthetase [Thermoanaerobacter sp. X561] gi|307723820|ref|YP_003903571.1| NAD+ synthetase [Thermoanaerobacter sp. X513] gi|320116454|ref|YP_004186613.1| NAD+ synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855150|gb|ABY93559.1| NAD+ synthetase [Thermoanaerobacter sp. X514] gi|166856879|gb|ABY95287.1| NAD+ synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300889881|gb|EFK85027.1| NAD+ synthetase [Thermoanaerobacter sp. X561] gi|307580881|gb|ADN54280.1| NAD+ synthetase [Thermoanaerobacter sp. X513] gi|319929545|gb|ADV80230.1| NAD+ synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 543 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 228/564 (40%), Positives = 324/564 (57%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINTAKYQKADLVVFPELATVGYPPKDFLFMQDFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 A I+ + + G+++G RQD EG L NS + G I+ + DK LPNY F Sbjct: 61 ANEKYINEIVL-PNTNQIGVILGTVRQDTEGNLYNSAFFIYEGEIVEIFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEFLFS 173 EKR F F+ I+LG+ ICEDIWK+ ++ + K + + Sbjct: 120 DEKRYFKPAQLRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQFKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPYY K R E++ +I +P +YVNQVG DELIFDGASF + + + Q+ Sbjct: 180 ISASPYYLGKENMRVEMIEKKIKKYAIPFVYVNQVGANDELIFDGASFVVNEEGKRVVQL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + + + L + + +D + YNA VL +RDY +K+ F Sbjct: 240 KAFEEDIKVFDIDELKNLRKLPEIKEDISWV-----------YNALVLGVRDYCKKSGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A LG ++ V+ Sbjct: 289 KAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKSDARILADNLGIEFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE+++ Sbjct: 349 PIEPVFKSYLSVFNG-DNNVIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDMSG P+ D+ KT V+ LA + N E+IP SI+EK+PSAEL Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYDLARFINRE---------REIIPISIIEKAPSAEL 458 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP+Q D++SLPPY ILD+I+K +E S ++ Y++ V+ V + + EYKR+QA Sbjct: 459 RPNQKDEDSLPPYKILDEILKMYIEENRSAKEIIEKGYDERLVKDVINKVNRVEYKRKQA 518 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 G KIT K+FG R PI + F+ Sbjct: 519 APGLKITTKAFGTGRRMPIVHNFK 542 >gi|226940195|ref|YP_002795268.1| NadE [Laribacter hongkongensis HLHK9] gi|226715121|gb|ACO74259.1| NadE [Laribacter hongkongensis HLHK9] Length = 739 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 217/535 (40%), Positives = 306/535 (57%), Gaps = 29/535 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ NP+VGDIAGN + R EA G D++L EL ++GY PEDL+ + +F Sbjct: 1 MRLALAQFNPIVGDIAGNANEIARLAREAMAAGADVLLTPELALTGYSPEDLLLRPAFYA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +D L G +++G P N+ ++ GNI+ K+ LPN F Sbjct: 61 EVNRQLDRL---MEIDGITLIIGHPAMLGSERFNAATVMRDGNILGTYHKMRLPNEEVFD 117 Query: 125 EKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E R F G + P+VF + +G+L+CEDIW + L GA+ L +NASP++ Sbjct: 118 EVRYFTPGVA--PLVFGQDGVNIGVLVCEDIWGPEPAAEALDA-GADVLLVMNASPFHRE 174 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + ++ LP+ YVN VGGQDEL+FDGASF + + ++ HF Sbjct: 175 KHAVREQECRWRVEETGLPVAYVNLVGGQDELVFDGASFALNRAGEPVCRLPHF------ 228 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + L + D + PL + EA Y A VL +RDY+ KN F V++GLSG Sbjct: 229 -----EAALGFLDVQDGDIRPAVMAPLPDPVEAVYRALVLGVRDYIGKNGFPGVLLGLSG 283 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL AIAVDALG + V +M+P +YT+ S++D+ + LG +YD + I + Sbjct: 284 GIDSALTLAIAVDALGADRVHAVMMPSRYTADISVDDSRDMVERLGVRYDEVAIWPMYES 343 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F ++ + EN+QSRIRG ILMALSN + ++LTT NKSE++ GY TLYGD Sbjct: 344 FMQALTPLFAGAAADTTEENLQSRIRGVILMALSNKTGKLVLTTGNKSEMTTGYATLYGD 403 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF LKD+ KT V++L+ WRN G +EVIP I++++PSAELRP Q DQ+ Sbjct: 404 MAGGFAVLKDVAKTLVYELSEWRNRQG--------SEVIPRRIIDRAPSAELRPDQVDQD 455 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 SLPPY +LD I+ VE S + Y+ V + LL +EYKRRQAPVG Sbjct: 456 SLPPYDVLDAIMAEYVEMNRSAADIVALGYDTADVERITRLLKVNEYKRRQAPVG 510 >gi|118595150|ref|ZP_01552497.1| NAD synthetase [Methylophilales bacterium HTCC2181] gi|118440928|gb|EAV47555.1| NAD synthetase [Methylophilales bacterium HTCC2181] Length = 532 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 216/553 (39%), Positives = 320/553 (57%), Gaps = 26/553 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ +AQLN +VGD+ N + E+A G D++L EL ISGYPPEDL+ FI Sbjct: 1 MKVHLAQLNTIVGDLNFNKNLILKEAEKAMLNGADILLTPELSISGYPPEDLLLDHEFIN 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C +D + D IV+G P + + NS+ L ++ K LPNY F Sbjct: 61 ECDKCVDEIAIKFPD--ILIVIGHPMLEDNKLYNSLSALYKSKVLCTYHKRVLPNYGVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G N I + ++ LICED+W + + L KQG + + +NASP+ K Sbjct: 119 EKRYFSEGKDNATINYNGKKISFLICEDVW-TEGLVESLVKQGVDIILCINASPFEVKKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +KR + +T +I+ + ++Y+N +GGQD ++FDG SF +DG + L F++ FS + + + Sbjct: 178 QKRIDQITNKIAGNEVALVYLNALGGQDNVVFDGGSFVYDGMKGLIFELPQFSLTSEIID 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + +L Y + E N VL+L DY++KNN +V +GLSGGID Sbjct: 238 LNVGTKLLPKIY-------------NDLEIILNGLVLALHDYLEKNNIERVFLGLSGGID 284 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL IA A+ K+N+ +M+P KYT+ SLEDA + + LG Y I L+N+ Sbjct: 285 SALVLFIATKAMAKKNIHAVMMPSKYTANISLEDAQSLTENLGVNYQTYSIETLINNIDQ 344 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + S+ + P+ I EN Q+RIRG +LM L+N M+L TSNKSE++VGY T+YGDM G Sbjct: 345 VFSEEFKNLPADITEENFQARIRGLLLMGLANKHHGMVLATSNKSELAVGYSTIYGDMVG 404 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V+ LA N +IP I+ + PSAEL+ +QTDQ++LP Sbjct: 405 GFCVLKDVPKTMVYDLARHINRE---------ENIIPSRIITREPSAELKNNQTDQDTLP 455 Query: 485 PYPILDDIIKRIVENEES-FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y ILDD+I+ VE +++ + ++ + V V +L+ GSE+KRRQ+ G KIT+K+F Sbjct: 456 SYEILDDVIRLYVEEKQTPAFMIESGFDSQIVEKVVNLINGSEFKRRQSAPGPKITSKAF 515 Query: 544 GRDRLYPISNKFR 556 DR +PI+NK++ Sbjct: 516 SVDRRFPITNKYK 528 >gi|170691912|ref|ZP_02883076.1| NAD+ synthetase [Burkholderia graminis C4D1M] gi|170143196|gb|EDT11360.1| NAD+ synthetase [Burkholderia graminis C4D1M] Length = 591 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 237/596 (39%), Positives = 339/596 (56%), Gaps = 47/596 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQ+N VGD AGN+AK A +A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQINVTVGDFAGNVAKIVAAARDAHSAGAKLLVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQD--------------------QEGV-----L 97 A ++A+ L G ++VG P +D Q GV Sbjct: 62 TASAAALADLAQQLKQFAGLHVIVGHPLRDAADSVANSAASGHGNANAPIQRGVPPVDTF 121 Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWK 155 N+ ++ G I K +LPN F EKR F S P VF ++ G++ICED W Sbjct: 122 NAASLVVDGRIAGTYRKQDLPNTEVFDEKRYFAS--DAQPFVFELDGVKYGVVICEDAW- 178 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 +++ + K GA+ L N SP++ NK R +I+ +I LP++YVN VG QDEL+ Sbjct: 179 HASAAQMAKAAGAQVLLIPNGSPFHLNKEAVRFDILRARIRETGLPMVYVNMVGAQDELV 238 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQL------SQWNYMSDDSASTMYIP- 268 FDG SF D Q +L +M F E E+ L ++ N S +T P Sbjct: 239 FDGGSFVLDAQGELVAKMPQFEEATAFVEFENAVPLRGHGGEAKANDAQLFSGATGANPA 298 Query: 269 ----LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 L E Y A V+ +RDYV KN F +IGLSGG+DSAL A+A DALG + V+ + Sbjct: 299 IAPELSLEAQVYAALVMGVRDYVNKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAV 358 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 M+P +YT+ S DAA A+ +G +YD + I + + F S ++Q + P ENIQ+ Sbjct: 359 MMPSRYTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRSSLAQEFEGRPEDATEENIQA 418 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 RIRG +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +R Sbjct: 419 RIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYR 478 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFI 504 N + G VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Sbjct: 479 NQ---ATAFG-TQNVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRSLA 534 Query: 505 N-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y E V+ V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 535 EIIAAGYAVEDVKRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPV 590 >gi|330831161|ref|YP_004394113.1| glutamine-dependent NAD(+) synthetase [Aeromonas veronii B565] gi|328806297|gb|AEB51496.1| Glutamine-dependent NAD(+) synthetase (NAD(+) synthase) [Aeromonas veronii B565] Length = 540 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 229/556 (41%), Positives = 335/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L + +AQLN VG I N K A +A +QG DL++ +EL ++GYPPEDL+ + Sbjct: 1 MAKALSLMLAQLNLTVGAIEDNTDKVLAAAAQAEQQGADLLVCSELALTGYPPEDLLLRA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + +A+ + + G I+VG P ++ E + N+ + + G +I K +LPNY Sbjct: 61 DLMIRVEAALSRIAA--WQGACAILVGHPWREGEALYNAASLYEQGQLITRYFKQDLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F + + FR +LG+LICED+W+ K GAE L ++NASPY Sbjct: 119 GVFDEKRYFTAATETCVVPFRGYQLGLLICEDLWQPGPA-LAAKAAGAELLLTINASPYD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R E++ + LP++Y+NQV GQDELIFDG S F Q +L ++ F+E+ Sbjct: 178 QEKPWIRRELMAERCDQTGLPLVYLNQVCGQDELIFDGCSKVFSSQGELTHKLAPFAEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + Q + + + PL+ Y A VL++RDYV KN FH ++GLS Sbjct: 238 ALVRFADGQPVKEREPAA---------PLEPLAETYQALVLAVRDYVTKNGFHGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G + VQ +M+P++YT+ S+EDA A+ +G +++++ I + Sbjct: 289 GGIDSALTLAIAADAIGADKVQAVMMPFRYTAQMSVEDAKEQAERMGVEFNIISIEPMFE 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 GFMTQLAPLFEGTARDTTEENLQARCRGVLLMALSNKRRRIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L +RNS + VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLCEYRNS---------VDYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I+KR VE + S + E + + VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILKRYVEEDASVADMVAEGFEEAVVRKVIRLVDLNEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|307265807|ref|ZP_07547358.1| NAD+ synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919202|gb|EFN49425.1| NAD+ synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 543 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/565 (40%), Positives = 326/565 (57%), Gaps = 36/565 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F+EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINRAKYQKADLVVFSELVTVGYPPKDFLFMQDFLE 60 Query: 65 ACSSAIDTLK-SDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSE 122 A I+ + T+ G+++G RQD EG L NS + G I+ V DK LPNY Sbjct: 61 ANEKYINEIVLPATYQ--IGVILGTVRQDAEGNLYNSAFFIYDGKIVEVFDKTLLPNYDV 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEFLF 172 F EKR F F+ I+LG+ ICEDIWK+ ++ + K + Sbjct: 119 FDEKRYFKPAQIRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQFKLKPDIFI 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASPYY K R E++ +I +P +YVNQVG DELIFDG+SF + + + Q Sbjct: 179 NISASPYYLGKQNMRVEMIEKKIKKYAIPFVYVNQVGANDELIFDGSSFVVNEEGKRVVQ 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 +K F E + + + + + +D + YNA V+ +RDY +K+ F Sbjct: 239 LKAFEEDIKIFDMEELKNFKELPEIKEDISWV-----------YNALVVGVRDYCKKSGF 287 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A+ LG ++ V Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKTDARILAENLGVEFRV 347 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE++ Sbjct: 348 IPIEPVFKSYLSVFNG-DNSVIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +GY TLYGDMSG P+ D+ KT V++LA + N E+IP SI+EK PSAE Sbjct: 407 MGYCTLYGDMSGSLAPIADVPKTMVYELARYINRE---------REIIPISIIEKVPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP+Q D++SLPPY ILD+I+K +E S ++ Y++ V+ V + + EYKR+Q Sbjct: 458 LRPNQKDEDSLPPYKILDEILKMYIEENRSAKEIIEKGYDERLVKDVINNVNKVEYKRKQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 A G K+T K+FG R PI + F+ Sbjct: 518 AAPGLKVTTKAFGTGRRMPIVHNFK 542 >gi|262369416|ref|ZP_06062744.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315484|gb|EEY96523.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 541 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/560 (40%), Positives = 329/560 (58%), Gaps = 27/560 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G++ N K EA +Q DLI+F EL GYP EDL+ + S Sbjct: 1 MKSFKIALAQFSPHIGNLEANAQKMLEQANEAKKQNADLIIFPELSSIGYPAEDLLLRPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + + LK+ +V GF Q ++G N+ ++ G ++ V +K NLPNY Sbjct: 61 LTKRTQQVFEQLKTVKD---IVMVFGFVNQTEDGQRYNAAAVMKDGQVLGVYNKQNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F G+ + + + G+LICED+W S + + L + E LNASPY Sbjct: 118 SVFDEKRYFTEGHQHLVFEYLGHKFGVLICEDVWSLSTV-QQLAQLNVETALVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R E ++ ++L ++Y NQVGGQD+LIFDG SF + Q + F E Sbjct: 177 VGKPQHRVETMSALAKQMNLNLVYANQVGGQDDLIFDGTSFVIAKNGSIVLQAESFKESL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGL 299 + E+ +QQ + N + P + A+ Y + V++ RDYVQ++ F VI+GL Sbjct: 237 YFAEYEAEQQAFKANALP---------PALDTMAEIYQSLVMATRDYVQRSGFPGVILGL 287 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIA DA+G + VQ +M+PY YT+ S+EDAA AK++G + + I+ +V Sbjct: 288 SGGIDSALTLAIAADAIGADKVQAVMMPYTYTAQISVEDAAEQAKSMGVTFGIAEINPIV 347 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE++VGY TLY Sbjct: 348 NSFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELAVGYCTLY 407 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF LKD+YKT VF+LA +RNS I+ VIP ++ + PSAELRP Q D Sbjct: 408 GDMVGGFAVLKDVYKTIVFELAKYRNS--ISD-----KPVIPERVITRPPSAELRPDQKD 460 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLPPY +LD I+ +E + S +D + ++ E V V L+ +EYKRRQ +G Sbjct: 461 QDSLPPYDVLDAILYAYIEEDMS--QDDIIAKGFDAEVVAKVIRLVDFNEYKRRQGAIGP 518 Query: 537 KITAKSFGRDRLYPISNKFR 556 +I++++F R+R YPI N ++ Sbjct: 519 RISSRAFSRERRYPIMNGWK 538 >gi|166366233|ref|YP_001658506.1| NAD synthetase [Microcystis aeruginosa NIES-843] gi|166088606|dbj|BAG03314.1| glutamine-dependent NAD(+) synthetase [Microcystis aeruginosa NIES-843] Length = 552 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 225/574 (39%), Positives = 333/574 (58%), Gaps = 46/574 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQLNP+VGDI GN + A + A QG +L+L EL + GYPP DL+ F++ Sbjct: 1 MRIAIAQLNPIVGDIEGNAQRILEAAQTAFNQGAELLLTPELSLCGYPPRDLLLNLGFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 S + L + A ++VGF ++ ++ + NS+ +L + I + K L Sbjct: 61 KMSRQLQLLSQQLPEKLA-VLVGFVEKNPSATVRGEKPLFNSIALLKSQEIKQIFTKRLL 119 Query: 118 PNYSEFHEKRTFISGYSND--PIVFRDIRLGILICEDIWKNS----------NICKHLKK 165 P Y F E R F SG + + ++++G+ ICED+W + N L Sbjct: 120 PTYDVFDEDRYFASGKESQYFQLTENNVKIGVTICEDVWNDEQFWGQRQYAVNPIADLAN 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 G + + +L+ASPY K K R +++ + +LPI+YVNQVGG D+LIFDG S F+ Sbjct: 180 LGVDLIVNLSASPYSVGKQKLRESLLSHSATRYNLPIVYVNQVGGNDDLIFDGDSVAFNR 239 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 Q ++ ++ + F+ + E++ D A +P+ E+E Y A VL +RD Sbjct: 240 QGEVIYRAQAFTSSLELIEFNQDLL----------PAVIHPLPVDEDEEIYRALVLGVRD 289 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 YVQK F +VI GLSGGIDS+L AAIA DALGKENV +M+P Y+S S+ DA A Sbjct: 290 YVQKCGFKRVIFGLSGGIDSSLVAAIASDALGKENVLAVMMPSPYSSDHSISDAVALVNN 349 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG K + L I +++ + L+ GI EN+QSRIRGN+LMALSN +LL+T Sbjct: 350 LGIKSEKLAIQEIMTAYDQLLEPVFAGTDFGIAEENLQSRIRGNLLMALSNKFGHLLLST 409 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY TLYGDM+GG + D+ KT+V+ L W N HG E+IP +++ Sbjct: 410 GNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCRWLNRHG---------EIIPLNVI 460 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEHL 521 K+PSAEL+P+Q DQ+SLPPY ILD I+ +++ +S +Q + E V+ V L Sbjct: 461 NKAPSAELKPNQKDQDSLPPYEILDAILALLIDRHQS---AEQIIAAGFEPEIVQKVIKL 517 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +E+KR+QAP G KI+ ++FG PI++++ Sbjct: 518 VKNAEFKRKQAPPGLKISDRAFGTGWRMPIASRW 551 >gi|241663744|ref|YP_002982104.1| NAD synthetase [Ralstonia pickettii 12D] gi|240865771|gb|ACS63432.1| NAD+ synthetase [Ralstonia pickettii 12D] Length = 545 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/565 (40%), Positives = 329/565 (58%), Gaps = 34/565 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A+AQ+N VGD AGN ++ A EA++ G ++L EL ++GYPPEDL+ + +FI Sbjct: 3 VSVALAQINCTVGDFAGNASRIVAAAREAHQAGARILLTPELSLTGYPPEDLLLRPAFID 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQE----GVL----NSVVILDAGNIIAVRDKI 115 A + A+D L ++ G +++G P+ E GVL NSV + G ++ +K+ Sbjct: 63 ASARALDALIAELAAFPGLHVLIGHPQLSLEAPAPGVLPKPTNSVTVAVDGRVVGRYNKL 122 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 LPN F EKR F G +P VF R G++ICED W + L Sbjct: 123 ELPNNEVFDEKRYFQPG--TEPFVFEVDGTRFGVIICEDAWYATATAYAKAAGAQVVLIP 180 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 NASPY+ +K R I+ ++ LP +Y N VGGQDEL+FDG SF D + + +M Sbjct: 181 -NASPYHLDKEDLRERIIGARVKESGLPHVYANLVGGQDELVFDGGSFVLDAEGNVVVRM 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F E ++ + L T+ E Y A L +RDY+ KN F Sbjct: 240 GQFVEGVGYVQFDGGRALP----------GTIVPEASLEAQVYEALKLGVRDYLGKNGFP 289 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD + Sbjct: 290 GAIIGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAARLGVQYDEI 349 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I + + F +++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE++V Sbjct: 350 AISPMFDAFKGALAEDFRGLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAV 409 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAEL Sbjct: 410 GYCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAEL 460 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQA 532 R +QTDQ+SLP Y LD I++R +E + + + + + V+ + L+ +EYKRRQA Sbjct: 461 RENQTDQDSLPEYDALDAIVQRYMEQNQPVADIIADGFAEADVQKIVRLIKINEYKRRQA 520 Query: 533 PVGTKITAKSFGRDRLYPISNKFRD 557 PVG ++T ++FGRD YPI+++F++ Sbjct: 521 PVGIRVTQRAFGRDWRYPITSRFKE 545 >gi|124514781|gb|EAY56293.1| NAD+ synthase [Leptospirillum rubarum] Length = 592 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 232/602 (38%), Positives = 331/602 (54%), Gaps = 57/602 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++KLK+A+AQ NP+VGDI GN+A + +A + +D+++F EL ++GYPPEDL+ K S Sbjct: 1 MRKLKLALAQTNPIVGDIPGNLAHIKDMILQARSEHVDVVVFPELALTGYPPEDLLLKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI A+D L + ++VGF + Q+ + N+ +L G + + K LPNY Sbjct: 61 FIDKNLRALDELLGFAPE--LLVLVGFVDR-QDDIYNAAAVLHGGKLHGIYRKQYLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F G + + +R RLGI ICEDIW G AE + +L+ASP++ Sbjct: 118 VFDENRYFQEGVESPVLEYRSARLGINICEDIWYPKGPLYTQTLMGDAECILNLSASPFH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R ++ + I YVN VGGQDEL+FDG S ++ + K F E Sbjct: 178 AGKREVRENMLCTRAVDSACYIAYVNMVGGQDELVFDGQSLVISPDGEIESRGKAFQEDL 237 Query: 241 FMTE-----------------------------WHYDQQLSQWNYMSDDS---------- 261 +TE W+ D L +W Sbjct: 238 LITEIDLDHVFRVRLHDPRRRKDRLSQSLDRPQWNQDDVLVRWKIEEAGRRQAPGGARPE 297 Query: 262 -----ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 S PL Y A V +RDYV+KN+F +V++GLSGGIDSAL AAIA DAL Sbjct: 298 KKVLVKSPYTQPLDRLSEIYEALVTGVRDYVRKNSFREVLVGLSGGIDSALVAAIATDAL 357 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 G E+V + +P +TS +S ED + L + +PI F ++S Q+ P Sbjct: 358 GAEHVHGLFMPSMFTSQESYEDVLKLSGTLKVHVETIPIGAAFEQFLQILSPHFQDRPRD 417 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 EN+QSRIRG +LMALSN ++LTT NKSE+SVGY TLYGDM+GGF+ LKD+ KT Sbjct: 418 TAEENLQSRIRGLLLMALSNKFHWLVLTTGNKSEMSVGYQTLYGDMAGGFSVLKDVPKTL 477 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 V+ LA + N+ ++IP I+EK+P+AELRP+Q D +SLPPY ILD I++ Sbjct: 478 VYDLADFLNTRR--------ADIIPHRIIEKAPTAELRPNQKDLDSLPPYEILDPIMEAY 529 Query: 497 VENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 VE+++ F + ++ TV V L+ SEYKRRQ+P G K+T ++FG+D PI+N+F Sbjct: 530 VEDDQGFEEIVGKGFDPATVARVLSLIDKSEYKRRQSPPGIKLTLRAFGKDWRVPITNRF 589 Query: 556 RD 557 ++ Sbjct: 590 KE 591 >gi|16330978|ref|NP_441706.1| NAD synthetase [Synechocystis sp. PCC 6803] gi|8928223|sp|P74292|NADE_SYNY3 RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|1653472|dbj|BAA18386.1| NH(3)-dependent NAD(+) synthetase [Synechocystis sp. PCC 6803] Length = 558 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 227/569 (39%), Positives = 322/569 (56%), Gaps = 39/569 (6%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA+AQLNP +G IA N K A +A +G DL+L EL + GYPP+DL+ SF++ Sbjct: 4 IALAQLNPTIGAIAENAEKIVTAALQAQARGADLLLTPELALCGYPPKDLLLNPSFVEQL 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGF-------PRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + L ++ I+VG RQ Q+ + NS V+++ G I K LP Sbjct: 64 EEELQWL-AEKMPPSIAILVGTVTPHHQAERQGQKKLWNSAVLIEQGQIKQWFHKCLLPT 122 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAE 169 Y F E R F S ++ +++++++G+ ICED+W + N L QG Sbjct: 123 YDVFDEDRYFASAAKSEYFIYKNVKIGVTICEDLWNDEAFWGQKFYQVNPLMDLIDQGVN 182 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L+ASPY K R +++ ++P+IYVNQVGG D+LIFDG SF + Q ++ Sbjct: 183 LVVNLSASPYSCGKHYLRESLISHSAKRFNVPLIYVNQVGGNDDLIFDGGSFAVNSQGKI 242 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F E + YD LS AS +P+ + E + A VL + DY+ K Sbjct: 243 IGRSPLFQED--LALLSYD--LSSGELTGQKLAS---LPMVDTEELWQALVLGVGDYLHK 295 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F K I+GLSGGIDS+L AAIAV+ALGKENV I++P Y+S S++DA A AK LG Sbjct: 296 CGFSKAILGLSGGIDSSLVAAIAVEALGKENVLGILMPSPYSSDHSIQDALALAKNLGMN 355 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 +PI ++ + + Q+ P G+ EN+QSRIRGN+LMA++N +LL+T NKS Sbjct: 356 TQTIPIGPIMATYDQALVPLFQDAPFGLAEENLQSRIRGNLLMAIANKFGHLLLSTGNKS 415 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + D+ KTQVF+L W N +IPPS+L K P Sbjct: 416 ELAVGYCTLYGDMNGGLAAIADVPKTQVFELCRWLNRE---------QTIIPPSVLTKPP 466 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYGSE 526 SAEL+P Q D +SLPPY +LD I+ R+VE +S IN + E V + L+ SE Sbjct: 467 SAELKPGQVDTDSLPPYDVLDGILGRLVEKHQSPQEIINAG--FEREVVLKICQLVQKSE 524 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQA G K+T ++FG PI+ F Sbjct: 525 FKRRQAAPGLKVTDRAFGSGWRMPIAQAF 553 >gi|326391022|ref|ZP_08212571.1| NAD+ synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325992967|gb|EGD51410.1| NAD+ synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 543 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/565 (40%), Positives = 325/565 (57%), Gaps = 36/565 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINTAKYQKADLVVFPELATVGYPPKDFLFMQDFLE 60 Query: 65 ACSSAIDTLK-SDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSE 122 A I+ + T+ G+++G RQD EG L NS + G I+ V DK LPNY Sbjct: 61 ANEKYINEIVLPATYQ--IGVILGTVRQDTEGNLYNSAFFIYDGKIVEVFDKTLLPNYDV 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEFLF 172 F EKR F F+ I+LG+ ICEDIWK+ ++ + K + Sbjct: 119 FDEKRYFKPAQIRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQFKLKPDIFI 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASPYY K R E++ +I +P +YVNQVG DELIFDG+SF + + + Q Sbjct: 179 NISASPYYLGKQNMRVEMIEKKIKKYAIPFVYVNQVGANDELIFDGSSFVVNEEGKRVVQ 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 +K F E + + + + + +D + YNA V+ +RDY +K+ F Sbjct: 239 LKAFEEDIKIVDMEELKNFKELPEIKEDISWV-----------YNALVVGVRDYCKKSGF 287 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A+ LG ++ V Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKTDARILAENLGVEFRV 347 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE++ Sbjct: 348 IPIEPVFKSYLSVFNG-DNSVIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +GY TLYGDMSG P+ D+ KT V++LA + N E+IP SI+EK PSAE Sbjct: 407 MGYCTLYGDMSGSLAPIADVPKTMVYELARYINRE---------REIIPISIIEKVPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP+Q D++SLPPY ILD+I+K +E S ++ Y++ V+ V + + EYKR+Q Sbjct: 458 LRPNQKDEDSLPPYKILDEILKMYIEENRSAKEIIEKGYDERLVKDVINKVNRVEYKRKQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 A G K+T K+FG R PI + F+ Sbjct: 518 AAPGLKVTTKAFGTGRRMPIVHNFK 542 >gi|167814772|ref|ZP_02446452.1| NAD synthetase [Burkholderia pseudomallei 91] Length = 566 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 238/588 (40%), Positives = 340/588 (57%), Gaps = 56/588 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNSVV 101 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W +++ Sbjct: 122 LIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEAD 275 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 SFVLDGAGELVAKMPQFEESHAIVEF--------------DGARALPAPIAPALPVEAQV 284 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S Sbjct: 285 YRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADIS 344 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILM 392 DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LM Sbjct: 345 TTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLLM 401 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 ALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGA 461 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYN 511 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 L----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYA 517 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 EADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|160903300|ref|YP_001568881.1| NAD+ synthetase [Petrotoga mobilis SJ95] gi|160360944|gb|ABX32558.1| NAD+ synthetase [Petrotoga mobilis SJ95] Length = 575 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 218/580 (37%), Positives = 335/580 (57%), Gaps = 37/580 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K++I++AQ+N VGD GN+ K + +A+ +G D+ILF EL ++GYPPEDL+ K F+ Sbjct: 2 KIRISLAQMNSTVGDYPGNVEKIKDFISKADEKGADIILFPELSLNGYPPEDLILKTQFL 61 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + +I+ ++ + IV+G D E NS ++ G I K+ LPNYS F Sbjct: 62 KDSLKSIEEIQDFSKSKDVVIVLGAVDWDVES-YNSAFVIYKGEIYGSYKKMFLPNYSVF 120 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F +G + + I++GI ICED+W + L + GA + +L++SP+Y + Sbjct: 121 DEKRYFTAGRAPFLMEMERIKIGITICEDLWVPNGPAVSLAQNGANLILNLSSSPFYKGR 180 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 K R E++ + S + I Y N +GGQDEL+FDG S + ++ F E + Sbjct: 181 NKVRFEMLKTRASELSSWIAYCNIIGGQDELVFDGGSVVINPYGEIELSAPSFEEGLYFI 240 Query: 244 EW----------------HYDQQ--LSQWNYMSDDSASTMYIPLQEEEAD--------YN 277 + HY+Q N + + P++ + D Y Sbjct: 241 DIDPLEPTRANLREGKRKHYNQSAYYESVNTIKIEKKIREKTPIKAVKVDSFDIYEQLYL 300 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A ++DYV KN F KV++GLSGGIDS+L AAIA DA+G ENV +++P +Y+S S++ Sbjct: 301 AVKTGIKDYVLKNGFQKVVLGLSGGIDSSLTAAIAADAIGPENVVGLLMPSQYSSKGSID 360 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 D+ +K LG Y ++PI+D+ + + + + ENIQ+RIRGN++MA SN Sbjct: 361 DSIELSKNLGINYKIIPINDIYEKYIENLKESFKNTDEDKTEENIQARIRGNLVMAFSNK 420 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-HGITSGLGPL 456 + L NKSE + GY TLYGDM+GGF+P+KDLYKT ++++A N HG Sbjct: 421 FGYLALACGNKSEAATGYATLYGDMAGGFSPIKDLYKTDLYKVARKYNELHG-------- 472 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETV 515 E+I SILEK+PSAELRP+Q D++ LPPY +LD+I+ + ++ E S+ QE Y++ + Sbjct: 473 KEIIIKSILEKAPSAELRPNQKDEDILPPYALLDEILFKYIDREMSYDELLQEGYDEGLL 532 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + V +++ +EYKRRQ+ G K+T +SFG+DR PI+NK+ Sbjct: 533 KNVINMVNKNEYKRRQSAPGIKLTERSFGKDRRMPITNKY 572 >gi|218780476|ref|YP_002431794.1| NAD+ synthetase [Desulfatibacillum alkenivorans AK-01] gi|218761860|gb|ACL04326.1| NAD+ synthetase [Desulfatibacillum alkenivorans AK-01] Length = 548 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/580 (38%), Positives = 337/580 (58%), Gaps = 55/580 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP+VGD G +K + ++A DL++F EL + GYPP DL+ +KSFI+ Sbjct: 1 MKIALAQINPIVGDFKGARSKIQEFAQKAKNLSCDLVIFPELSVCGYPPRDLLERKSFIR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG------VLNSVVILDAGNIIAVRDKINLP 118 AC A+ +L D H G G+++GF D+ G + N+ ++ + GNI+ V K LP Sbjct: 61 ACQDAVQSLLDDIH--GIGVILGF--VDRVGGAPGKPIANAAMLFEDGNILEVVHKRLLP 116 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI----------CKHLKKQGA 168 Y F E R F G +P +++ + +G+ ICED W + ++ + L + A Sbjct: 117 TYDVFDESRYFAPGGKAEPFMYKGMNIGLTICEDAWNDKDLFPEQLYEWDPVQTLADKKA 176 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + + ++ ASP++ K R I++ L +YVNQVGG D LIFDGAS Sbjct: 177 DLIINIAASPFHAGKRAVRGSIMSHLAKKHRLSCVYVNQVGGNDHLIFDGASTVHTPGGD 236 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDY 286 LA F E++ +T +D + + + P+ E EA+ A V + DY Sbjct: 237 LAALAGEF-EEDLVT---FDTETGKGDIH----------PVCESEAESLAKALVTGVGDY 282 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K F KV++GLSGGIDSAL A+A +ALG EN +I +P +YTS Q+ D A L Sbjct: 283 VRKCGFSKVVVGLSGGIDSALTLAVAAEALGPENTYSIFMPSEYTSQQNHTDTKELADNL 342 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 GC Y+++PI + F S +S F +E G+ +NIQ+R RG+ILMA SN + AM+L+T Sbjct: 343 GCPYEIIPITPIFETFLSSLS-FCNKEDFGVTEQNIQARTRGSILMAFSNKTGAMVLSTG 401 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE++VGY TLYGDM+GG + + DL K V++++ + N E+IP SIL Sbjct: 402 NKSEVAVGYCTLYGDMNGGLSVISDLPKELVYEVSRYFNKD---------REIIPESILT 452 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-----YNDETVRYVEHL 521 K+PSAELRP QTDQ+ LPPY +LD I+ +E+ + + +E Y ++ VR + Sbjct: 453 KAPSAELRPDQTDQDDLPPYEVLDPILHAYIED----LKDPEEIIAMGYEEKIVRDIVRR 508 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISE 561 + +EYKRRQA G K+T+K+FG R YP++ +F+D E Sbjct: 509 VVRNEYKRRQAAPGLKLTSKAFGEGRRYPVAQRFKDQDGE 548 >gi|289577867|ref|YP_003476494.1| NAD+ synthetase [Thermoanaerobacter italicus Ab9] gi|289527580|gb|ADD01932.1| NAD+ synthetase [Thermoanaerobacter italicus Ab9] Length = 543 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 226/565 (40%), Positives = 325/565 (57%), Gaps = 36/565 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINRAKYQKADLVVFPELATVGYPPKDFLFMQDFLK 60 Query: 65 ACSSAIDTLK-SDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSE 122 A ++ + T+ G+++G RQD EG L NS + G I+ V DK LPNY Sbjct: 61 ANEKYVNEIVLPATYQ--IGVILGTVRQDTEGNLYNSAFFIYDGKIVEVFDKTLLPNYDV 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEFLF 172 F EKR F F+ I+LG+ ICEDIWK+ ++ + K + Sbjct: 119 FDEKRYFKPAQLRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQHKLKPDIFI 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASPYY K R E++ +I +P IYVNQVG DELIFDG+SF + + + Q Sbjct: 179 NISASPYYLGKQNMRVEMIEKKIKKYAIPFIYVNQVGANDELIFDGSSFVVNEEGKRVVQ 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 +K F E + + + + M +D + YNA VL +RDY +K+ F Sbjct: 239 LKAFEEDIKIVDIDELKNFKELPEMKEDISWV-----------YNALVLGVRDYCKKSGF 287 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A LG ++ V Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVFAVSMPSRYSSEGSKSDARILADNLGIEFRV 347 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE++ Sbjct: 348 IPIEPVFESYLSVFNG-DNSAIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +GY TLYGDMSG P+ D+ KT V++LA + N E+IP SI+EK+PSAE Sbjct: 407 MGYCTLYGDMSGSLAPIADVPKTMVYELAKYINRK---------KEIIPISIIEKAPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP+Q D++SLPPY +LD+I+K +E S ++ Y+++ V+ V + + EYKR+Q Sbjct: 458 LRPNQKDEDSLPPYKVLDEILKMYIEENRSVKEIVEKGYDEKLVKDVINKVNRVEYKRKQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 A K+T K+FG R PI + F+ Sbjct: 518 AAPVLKVTTKAFGIGRRMPIVHNFK 542 >gi|256371064|ref|YP_003108888.1| NAD+ synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256007648|gb|ACU53215.1| NAD+ synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 571 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 233/584 (39%), Positives = 322/584 (55%), Gaps = 43/584 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L I AQLN VG + N R A E A G+D++ F EL ++GYPPEDL+ K + Sbjct: 1 MRSLVIQAAQLNLTVGAVRRNRDAVRAAIESARAAGVDVVAFPELTLTGYPPEDLLLKPA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNY 120 FI+ +A+D L D A VVGF D+E L NS +L G + AV K LPNY Sbjct: 61 FIEEQRAALDELAGSCRDIVA--VVGF--VDRESDLHNSAAVLADGAVQAVYHKQLLPNY 116 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + F E R F G P+V +RLG+ ICED W + GAE + +NASPY Sbjct: 117 TVFDEARYFQPGSVAPPVVEVNGVRLGLAICEDAWSPTGAIMQAAVAGAEVVVVINASPY 176 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + R +V + + H+ + YVN VGGQDEL+FDG SF D + + F E Sbjct: 177 EAGRQATRERLVAVRAADAHVAVSYVNLVGGQDELVFDGGSFVVDAVGAVIARAPQFREA 236 Query: 240 NFMTEW-----HYDQQLSQWNY-----MSDDSASTMY----------IPLQEEEAD---- 275 N + E Y Q+L S + A + +PL D Sbjct: 237 NLVVELELRGDRYRQRLVDPRGKVALGTSSEPAVRLATPGVRVARDPMPLAPAPVDGFDP 296 Query: 276 ---YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 Y A VL+ DYV+K ++ +SGGIDSAL A IAVDALG + + + LP +Y+S Sbjct: 297 GEVYAALVLATSDYVRKTGVPGALVAVSGGIDSALVATIAVDALGPDALTLVALPSRYSS 356 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 SL DA A LG +V+ I ++S SG+V EN+QSR+RG ++M Sbjct: 357 EGSLRDARLLADRLGVTLEVIAIEPAHAALLEMLSPATAT--SGVVEENLQSRVRGTVMM 414 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ALSN S ++LTT NKSE++VGY TLYGDM+GGF L+DLYK QV+ LA W N +G Sbjct: 415 ALSNASGRLVLTTGNKSELAVGYSTLYGDMAGGFAVLRDLYKEQVYALARWVNDR---AG 471 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYND 512 + + IP +IL K PSAELRP Q D +SLPPY ILD +++ ++ +E+ + + Sbjct: 472 I----DRIPTAILAKPPSAELRPGQLDTDSLPPYEILDRVLRSLI-DEDRTAAECEGVDP 526 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 E R +E ++ +EYKRRQ P+G +I+ ++FG+DR PI N++R Sbjct: 527 ELARTIEAMVDRAEYKRRQGPIGPRISERAFGKDRRMPIVNRWR 570 >gi|254251714|ref|ZP_04945032.1| NAD+ synthase [Burkholderia dolosa AUO158] gi|124894323|gb|EAY68203.1| NAD+ synthase [Burkholderia dolosa AUO158] Length = 607 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 231/580 (39%), Positives = 335/580 (57%), Gaps = 41/580 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+ + A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 44 KTRLALAQINVTVGDFAGNVERIVAAARAAHDDGAQLMVTPELALSGYPPEDLLLRPAFY 103 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP-RQD--------------QEGV-----LNSVVI 102 A ++++ L G ++VG P R D + GV N+V + Sbjct: 104 AAAAASLHALADALKAFDGLAVLVGHPLRGDARAPAVDSNANGPIERGVPPVDTYNAVSL 163 Query: 103 LDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNIC 160 + G I+ K +LPN F EKR F + +P+VF ++ G++ICED W +++ Sbjct: 164 IVGGEIVGTYRKQDLPNAEVFDEKRYFAT--DAEPLVFELNGVKFGVIICEDAW-HASAA 220 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG S Sbjct: 221 QIAKAAGAQVLLIPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGS 280 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F DGQ L Q+ F E + + E+ Q L + L E Y A V Sbjct: 281 FVLDGQGALVAQLPQFDEAHAIVEFDGAQPLR----------GAIAPALSLEAQVYRALV 330 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L +RDY+ KN F IIGLSGG+DSAL A+A DALG E V+ +M+P ++T+ S DAA Sbjct: 331 LGVRDYIGKNGFPGAIIGLSGGVDSALVLALACDALGPERVRAVMMPSRFTADISTADAA 390 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN + Sbjct: 391 EMARRVGVRYDEIAIAPMFDAFRAALADEFAGLAEDATEENIQARIRGTLLMALSNKFGS 450 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++LTT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ + + +VI Sbjct: 451 IVLTTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNATTDYA----VRDVI 506 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVE 519 P IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V Sbjct: 507 PERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQADVERVT 566 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + + Sbjct: 567 RLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFTERL 606 >gi|53725163|ref|YP_102509.1| NAD synthetase [Burkholderia mallei ATCC 23344] gi|67639855|ref|ZP_00438685.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei GB8 horse 4] gi|124383580|ref|YP_001028956.1| NAD synthetase [Burkholderia mallei NCTC 10229] gi|167844790|ref|ZP_02470298.1| NAD synthetase [Burkholderia pseudomallei B7210] gi|167910020|ref|ZP_02497111.1| NAD synthetase [Burkholderia pseudomallei 112] gi|167918051|ref|ZP_02505142.1| NAD synthetase [Burkholderia pseudomallei BCC215] gi|254199416|ref|ZP_04905782.1| glutamine dependent NAD+ synthetase [Burkholderia mallei FMH] gi|254357888|ref|ZP_04974161.1| glutamine dependent NAD+ synthetase [Burkholderia mallei 2002721280] gi|52428586|gb|AAU49179.1| glutamine dependent NAD+ synthetase [Burkholderia mallei ATCC 23344] gi|124291600|gb|ABN00869.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei NCTC 10229] gi|147749012|gb|EDK56086.1| glutamine dependent NAD+ synthetase [Burkholderia mallei FMH] gi|148027015|gb|EDK85036.1| glutamine dependent NAD+ synthetase [Burkholderia mallei 2002721280] gi|238520463|gb|EEP83923.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei GB8 horse 4] Length = 566 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 238/588 (40%), Positives = 340/588 (57%), Gaps = 56/588 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNSVV 101 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W +++ Sbjct: 122 LIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEAD 275 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEAQV 284 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S Sbjct: 285 YRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADIS 344 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILM 392 DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LM Sbjct: 345 TTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLLM 401 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 ALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGA 461 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYN 511 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 L----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYA 517 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 EADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|271964118|ref|YP_003338314.1| NAD(+) synthase [Streptosporangium roseum DSM 43021] gi|270507293|gb|ACZ85571.1| NAD(+) synthase (glutamine-hydrolyzing) [Streptosporangium roseum DSM 43021] Length = 597 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 228/600 (38%), Positives = 325/600 (54%), Gaps = 47/600 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ +PVVGD+A N K A +G L++FTE+F++GYP EDLV + S Sbjct: 4 VAQLRIALAQTDPVVGDLAANADKLVEWTRRAAGRGAHLVVFTEMFLTGYPVEDLVLRSS 63 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-------PR--QDQEGVLNSVVILDAGNII 109 F++A ++A++ L D G G VVG+ PR Q + L++ +L G ++ Sbjct: 64 FVEASTAAVEALARRLADEGLGEIPAVVGYVDRADLAPRVGQPKGAPLDAAALLHRGRVV 123 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G + + I +CED+W+ + + GA Sbjct: 124 TKTAKHHLPNYGVFDEYRYFVRGDRLPIFRLHGVDVAIAVCEDLWQEGGPVAVVAEAGAG 183 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L NASPY K R +V+ + + Y NQVGGQDEL+FDG S +L Sbjct: 184 LLVVPNASPYEKEKDDVRLALVSRRAREAGCALAYANQVGGQDELVFDGDSIIVSASGEL 243 Query: 230 AFQMKHFSEQNFMTEWHY-DQQLSQWNYMSDDSASTMYIPLQEEEAD------------- 275 + F+E+ +T+ + + D+ I ++ E Sbjct: 244 VARAAQFAEELLVTDLELPEARFGGLGTFQVDAGDGTVITVERLELSAFPVEPYAPEPPS 303 Query: 276 -----------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 Y+A VL++RDYV KN F VI+GLSGGIDSAL A IA DA+G + V + Sbjct: 304 IAPHLDDIAEVYSALVLAVRDYVAKNGFQSVILGLSGGIDSALTATIASDAIGPDRVHVV 363 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 M+P +Y+S SLEDA G ++PI D+V+ F + E SG+ AEN+Q+ Sbjct: 364 MMPSRYSSEHSLEDAWELVNRQGVNARIVPIADIVDSFEK------EIELSGLAAENLQA 417 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R+RG ILM LSN ++LTT NKSE++ GY TLYGD +GGF P+KD+ KT V++L+ WR Sbjct: 418 RVRGMILMGLSNQHGHLVLTTGNKSELATGYSTLYGDSAGGFAPIKDVLKTLVWKLSRWR 477 Query: 445 NSHGITSGL---GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 N+ SG G IP + +EK PSAELRP Q D +SLP Y +LD ++ VE + Sbjct: 478 NAQAGRSGAFLHGFAVPPIPENSIEKEPSAELRPDQRDTDSLPEYDVLDRLLDDYVEKDM 537 Query: 502 SFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 +D V + L+ +EYKRRQ P G KIT K+FGRDR PI+N +R+ I+ Sbjct: 538 GSAELIAAGHDPALVARIIRLVDLAEYKRRQYPPGPKITPKNFGRDRRLPITNHWRETIA 597 >gi|254197010|ref|ZP_04903434.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei S13] gi|169653753|gb|EDS86446.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei S13] Length = 609 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 341/590 (57%), Gaps = 56/590 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 43 VMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 F-IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNS 99 F + ++ G ++VG P R + G N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS 157 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W ++ Sbjct: 163 ASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HA 219 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FD Sbjct: 220 SAAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFD 279 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEE 273 G SF DG +L +M F E + + E+ D A + P L E Sbjct: 280 GGSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEA 325 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 326 QVYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAD 385 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNI 390 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG + Sbjct: 386 ISTTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTL 442 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 443 LMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEY 502 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 503 GAL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAG 558 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 559 YAEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|121600205|ref|YP_993581.1| NAD synthetase [Burkholderia mallei SAVP1] gi|126451392|ref|YP_001081129.1| NAD synthetase [Burkholderia mallei NCTC 10247] gi|251768136|ref|ZP_02269590.2| glutamine-dependent NAD(+) synthetase [Burkholderia mallei PRL-20] gi|254177493|ref|ZP_04884148.1| glutamine dependent NAD+ synthetase [Burkholderia mallei ATCC 10399] gi|254205731|ref|ZP_04912083.1| glutamine dependent NAD+ synthetase [Burkholderia mallei JHU] gi|121229015|gb|ABM51533.1| glutamine dependent NAD+ synthetase [Burkholderia mallei SAVP1] gi|126244262|gb|ABO07355.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei NCTC 10247] gi|147753174|gb|EDK60239.1| glutamine dependent NAD+ synthetase [Burkholderia mallei JHU] gi|160698532|gb|EDP88502.1| glutamine dependent NAD+ synthetase [Burkholderia mallei ATCC 10399] gi|243060709|gb|EES42895.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei PRL-20] Length = 609 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 341/590 (57%), Gaps = 56/590 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 43 VMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 F-IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNS 99 F + ++ G ++VG P R + G N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS 157 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W ++ Sbjct: 163 ASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HA 219 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FD Sbjct: 220 SAAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFD 279 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEE 273 G SF DG +L +M F E + + E+ D A + P L E Sbjct: 280 GGSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEA 325 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 326 QVYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAD 385 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNI 390 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG + Sbjct: 386 ISTTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTL 442 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 443 LMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEY 502 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 503 GAL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAG 558 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 559 YAEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|161524057|ref|YP_001579069.1| NAD synthetase [Burkholderia multivorans ATCC 17616] gi|189351182|ref|YP_001946810.1| NAD synthetase [Burkholderia multivorans ATCC 17616] gi|160341486|gb|ABX14572.1| NAD+ synthetase [Burkholderia multivorans ATCC 17616] gi|189335204|dbj|BAG44274.1| NAD+ synthase [Burkholderia multivorans ATCC 17616] Length = 566 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 233/580 (40%), Positives = 336/580 (57%), Gaps = 38/580 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHEDGAHLMIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV-----------------LNSVVILDA 105 ++A+D L G ++VG P + GV N+ ++ Sbjct: 62 AEAAAALDALADALKPFDGLAVLVGHPLRGAPGVDGNANRPIERGVPPVDTYNAASLIVG 121 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + +P+VF +R G++ICED W +++ + Sbjct: 122 GRIVGTYRKQDLPNAEVFDEKRYFAT--DAEPLVFELNGVRFGVIICEDAW-HASAAQIA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 179 KAAGAQVLLIPNGSPYHMNKEAVRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 DGQ L QM F E + + E+ + L + PL + Y A VL + Sbjct: 239 DGQGALVAQMPQFDEGHAIVEFDGARPLP----------GAIAPPLPVDAQVYRALVLGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 289 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAADMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRAALAAEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ TS G ++IP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNA---TSDYG-RRDIIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 +EYKRRQAP+G ++T ++FGRD YPI+++F + + E Sbjct: 525 KLNEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERLGER 564 >gi|254298299|ref|ZP_04965751.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 406e] gi|157808118|gb|EDO85288.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 406e] Length = 609 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 341/590 (57%), Gaps = 56/590 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 43 VMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 F-IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNS 99 F + ++ G ++VG P R + G N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS 157 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W ++ Sbjct: 163 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HA 219 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FD Sbjct: 220 SAAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFD 279 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEE 273 G SF DG +L +M F E + + E+ D A + P L E Sbjct: 280 GGSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEA 325 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 326 QVYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAD 385 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNI 390 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG + Sbjct: 386 ISTTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTL 442 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 443 LMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEY 502 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 503 GAL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAG 558 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 559 YAEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|53718666|ref|YP_107652.1| NAD synthetase [Burkholderia pseudomallei K96243] gi|52209080|emb|CAH35021.1| putative glutamine-dependent NAD synthase [Burkholderia pseudomallei K96243] Length = 576 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 341/590 (57%), Gaps = 56/590 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 10 VMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 69 Query: 62 F-IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEGVL-----NS 99 F + ++ G ++VG P R + G N+ Sbjct: 70 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 129 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS 157 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W ++ Sbjct: 130 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HA 186 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FD Sbjct: 187 SAAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFD 246 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEE 273 G SF DG +L +M F E + + E+ D A + P L E Sbjct: 247 GGSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEA 292 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 293 QVYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAD 352 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNI 390 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG + Sbjct: 353 ISTTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTL 409 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 410 LMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEY 469 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 470 GAL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAG 525 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 526 YAEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 575 >gi|167823227|ref|ZP_02454698.1| NAD synthetase [Burkholderia pseudomallei 9] gi|217419898|ref|ZP_03451404.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 576] gi|226194412|ref|ZP_03790010.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei Pakistan 9] gi|217397202|gb|EEC37218.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 576] gi|225933497|gb|EEH29486.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei Pakistan 9] Length = 566 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 238/588 (40%), Positives = 340/588 (57%), Gaps = 56/588 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNSVV 101 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W +++ Sbjct: 122 LIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEAD 275 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEAQV 284 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S Sbjct: 285 YRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADIS 344 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILM 392 DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LM Sbjct: 345 TTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLLM 401 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 ALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGA 461 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYN 511 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 L----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYA 517 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 EADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|167900233|ref|ZP_02487634.1| NAD synthetase [Burkholderia pseudomallei 7894] Length = 567 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 238/589 (40%), Positives = 340/589 (57%), Gaps = 57/589 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP-----------------RQDQEG-----VLNSV 100 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRAAGGAAASSADGNANRPIERGAAPVDTYNAA 121 Query: 101 VILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSN 158 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W +++ Sbjct: 122 SLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HAS 178 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDG 238 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEA 274 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 GSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEAQ 284 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 285 VYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADI 344 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +L Sbjct: 345 STTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLL 401 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 MALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 MALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYG 461 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEY 510 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 AL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGY 517 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 AEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 566 >gi|167718609|ref|ZP_02401845.1| NAD synthetase [Burkholderia pseudomallei DM98] Length = 567 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 238/589 (40%), Positives = 340/589 (57%), Gaps = 57/589 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP-----------------RQDQEG-----VLNSV 100 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRVAGGAAASSADGNANRPIERGAAPVDTYNAA 121 Query: 101 VILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSN 158 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W +++ Sbjct: 122 SLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HAS 178 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDG 238 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEA 274 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 GSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEAQ 284 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 285 VYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADI 344 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +L Sbjct: 345 STTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLL 401 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 MALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 MALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYG 461 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEY 510 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 AL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGY 517 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 AEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 566 >gi|134281251|ref|ZP_01767960.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 305] gi|134247557|gb|EBA47642.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 305] Length = 610 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 238/591 (40%), Positives = 341/591 (57%), Gaps = 57/591 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 43 VMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 F-IQACSSAIDTLKSDTHDGGAGIVVGFP-----------------RQDQEG-----VLN 98 F + ++ G ++VG P R + G N Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGGAAASSADGNANRPIERGAAPVDTYN 162 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKN 156 + ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W + Sbjct: 163 AASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-H 219 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 ++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+F Sbjct: 220 ASAAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVF 279 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEE 272 DG SF DG +L +M F E + + E+ D A + P L E Sbjct: 280 DGGSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVE 325 Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 326 AQVYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTA 385 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGN 389 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG Sbjct: 386 DISTTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGT 442 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 443 LLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAE 502 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQ 508 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 503 YGAL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAA 558 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 559 GYAEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 609 >gi|166713131|ref|ZP_02244338.1| NAD synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 546 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 233/572 (40%), Positives = 319/572 (55%), Gaps = 44/572 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPP 53 M + L+IA+AQ + VG + N IA AR E D++LF EL ISGYPP Sbjct: 1 MSQTLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPP 54 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 EDL+ + F+ C A+ + + T G VVG+P+ V N+ +L G I A Sbjct: 55 EDLLLRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIAATYR 112 Query: 114 KINLPNYSEFHEKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 K LPNY+ F E+R F DP + + +++G++ICED+W + +K G Sbjct: 113 KRELPNYAVFDERRYF----DVDPDGENCVVTVKGVQVGVVICEDLWFPEPLANTVKA-G 167 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 AE + NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG Sbjct: 168 AEVVLVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDG 227 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 + F +Q + ++ + DD +M + + A V L+DY Sbjct: 228 SVHPAAAAFVDQWLVVDYAAQARRFTPVVWVDDGDESM------DALAWRAVVRGLQDYC 281 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +KN F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + AA ALG Sbjct: 282 RKNGFGKVWLGLSGGIDSALVLAMAVDALGSDNVTAVRLPSRYTAGLSNDLAAEQCDALG 341 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K + + I + + I EN+QSR RG ILMALSN +LLTT N Sbjct: 342 VKLETVAIEPAFEGLLAALGPLFAGTEPDITEENLQSRSRGVILMALSNKFGGLLLTTGN 401 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + Sbjct: 402 KSEYAVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISR 454 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYG 524 PSAELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y ETV +V L+ Sbjct: 455 PPSAELRDNQTDQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAAETVEHVLRLVRL 512 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +E+KR QA G K++ ++FGR+R YPI+N +R Sbjct: 513 NEWKRHQAAPGPKVSRRAFGRERRYPITNGYR 544 >gi|294666976|ref|ZP_06732205.1| NAD + synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603265|gb|EFF46687.1| NAD + synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 546 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 230/572 (40%), Positives = 321/572 (56%), Gaps = 44/572 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPP 53 M + L+IA+AQ + VG + N IA AR E D++LF EL ISGYPP Sbjct: 1 MSQTLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPP 54 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 EDL+ + F+ C A+ + + TH G VVG+P+ V N+ +L G I A Sbjct: 55 EDLLLRPGFLAHCEQALARIAAATH--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYR 112 Query: 114 KINLPNYSEFHEKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 K LPNY+ F E+R F DP + + +R+G++ICED+W + ++ G Sbjct: 113 KRELPNYAVFDERRYF----DVDPDGENCVVTVKGVRVGVVICEDLWFAEPLANTVRA-G 167 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 AE + NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG Sbjct: 168 AELVLVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDG 227 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 + F +Q + ++ ++ DD +M + + A V L+DY Sbjct: 228 TVHPAAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYC 281 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +KN F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG Sbjct: 282 RKNGFSKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALG 341 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K + + I + + I EN+QSR RG ILMALSN ++LTT N Sbjct: 342 VKLETIAIEPAFEGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGN 401 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + Sbjct: 402 KSEYAVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISR 454 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYG 524 PSAELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ Sbjct: 455 PPSAELRDNQTDQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRL 512 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +E+KR Q+ G K++ ++FGR+R YPI+N +R Sbjct: 513 NEWKRHQSAPGPKVSRRAFGRERRYPITNGYR 544 >gi|167737637|ref|ZP_02410411.1| NAD synthetase [Burkholderia pseudomallei 14] Length = 566 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 237/588 (40%), Positives = 340/588 (57%), Gaps = 56/588 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNSVV 101 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + P VF +R G+++CED+W +++ Sbjct: 122 LIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVLCEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEAD 275 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEAQV 284 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S Sbjct: 285 YRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADIS 344 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILM 392 DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LM Sbjct: 345 TTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLLM 401 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 ALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGA 461 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYN 511 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 L----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYA 517 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 EADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|159029185|emb|CAO87545.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 552 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/574 (39%), Positives = 333/574 (58%), Gaps = 46/574 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQLNP+VGDI GN + A + A QG +L+L EL + GYPP DL+ F++ Sbjct: 1 MRIAIAQLNPIVGDIEGNAQRILEAAQTAFNQGAELLLTPELSLCGYPPRDLLLNLGFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 S + L + A ++VGF ++ ++ + NS+ +L + I + K L Sbjct: 61 KMSQQLQLLSQQLPEKLA-VLVGFVEKNPSATVRGEKPLFNSIALLKSQEIKQIFTKRLL 119 Query: 118 PNYSEFHEKRTFISGYSND--PIVFRDIRLGILICEDIWKNS----------NICKHLKK 165 P Y F E R F SG + + ++++G+ ICED+W + N L Sbjct: 120 PTYDVFDEDRYFASGKESQYFQLTENNVKIGVTICEDVWNDEQFWGQRQYAVNPIADLAN 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 G + + +L+ASPY K K R +++ + +LPI+YVNQVGG D+LIFDG S F+ Sbjct: 180 LGVDLIVNLSASPYSVGKQKLRESLLSHSATRYNLPIVYVNQVGGNDDLIFDGDSVAFNR 239 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 Q ++ ++ K F+ + E++ D A +P+ E+E Y A VL ++D Sbjct: 240 QGEVIYRAKAFTSSLELIEFNQDLL----------PAIIHPLPVDEDEEIYQALVLGVQD 289 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 YVQK F +VI GLSGGIDS+L AAIA DALGKENV +M+P Y+S S+ DA A Sbjct: 290 YVQKCGFKRVIFGLSGGIDSSLVAAIASDALGKENVLAVMMPSPYSSDHSISDAVALVNN 349 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG K + L I +++ + L+ GI EN+QSRIRGN+LMALSN +LL+T Sbjct: 350 LGIKSEKLAIKEIMTAYDQLLESLFAGTDFGIAEENLQSRIRGNLLMALSNKFGHLLLST 409 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY TLYGDM+GG + D+ KT+V+ L W N HG E+IP +++ Sbjct: 410 GNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCRWLNRHG---------EIIPLNVI 460 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEHL 521 K+PSAEL+P+Q DQ+SLPPY ILD I+ +++ +S +Q + E V+ V L Sbjct: 461 NKAPSAELKPNQKDQDSLPPYEILDAILALLIDRHQS---AEQIIAAGFEPEIVQKVIKL 517 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +E+KR+QAP G KI+ ++FG PI++++ Sbjct: 518 VKNAEFKRKQAPPGLKISDRAFGTGWRMPIASRW 551 >gi|126441824|ref|YP_001058134.1| NAD synthetase [Burkholderia pseudomallei 668] gi|126221317|gb|ABN84823.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 668] Length = 566 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 238/588 (40%), Positives = 340/588 (57%), Gaps = 56/588 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNSVV 101 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W +++ Sbjct: 122 LIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEAD 275 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEAQV 284 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S Sbjct: 285 YRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADIS 344 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILM 392 DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LM Sbjct: 345 TTDAADMAKRVGVRYDEIAIAPMFDAFCASLAAEFAGLAEDAT---EENIQARIRGTLLM 401 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 ALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGA 461 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYN 511 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 L----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYA 517 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 EADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|120611780|ref|YP_971458.1| NAD+ synthetase [Acidovorax citrulli AAC00-1] gi|120590244|gb|ABM33684.1| NAD+ synthetase [Acidovorax citrulli AAC00-1] Length = 550 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 231/562 (41%), Positives = 326/562 (58%), Gaps = 29/562 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQ N +VGD+ GN K A EA+ QG L+L EL + GY EDL + +F+ AC Sbjct: 5 ISIAQFNFIVGDVEGNARKIISAAHEAHAQGAALLLTPELALCGYAAEDLFLRPAFLDAC 64 Query: 67 SSAI-DTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNYS 121 A+ D ++ G +VVG P + G N+ +L G + K LPNY+ Sbjct: 65 DRALQDIAQATAACGDLAVVVGHPWRSVAGGAERCHNAASVLRGGRVEQTYAKQELPNYA 124 Query: 122 EFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E+R F G P VF + +R+G+LICED W + + A+ L +LNASP+ Sbjct: 125 VFDEQRYFDPG--TQPCVFDVQGVRVGLLICEDAWFPGPAARAAQAG-AQLLATLNASPF 181 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K +R +I+ +++ LP++Y + VGGQDE++F+G SF D + + F+E Sbjct: 182 HLGKSAEREQIMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALDATGFVGVRAPGFAEA 241 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIG 298 + + ++ D A P+ EAD ++A VL +RDYV KN F V++G Sbjct: 242 LVRVVARAEDGVLRFE---PDVA-----PIPAPEADLWSALVLGVRDYVGKNGFPGVLLG 293 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AIAVDALG + V+ +M+P YT+ S DA A+ LG +YD + I Sbjct: 294 LSGGIDSALVLAIAVDALGPDKVRAVMMPSPYTADISWIDARDMAERLGVRYDEIAIAPQ 353 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + ++ EN+Q+RIRG +LMALSN +++LTT NKSE++ GY TL Sbjct: 354 FEAFKAALASEFAGRAEDATEENLQARIRGTLLMALSNKFGSVVLTTGNKSEMATGYCTL 413 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 YGDM+GGF +KD+ KT V+ LA WRN+H +G P IP I+ + PSAELRP Q Sbjct: 414 YGDMAGGFAVIKDVAKTTVYGLARWRNAHDPFGTGASP----IPERIITRPPSAELRPDQ 469 Query: 478 TDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 DQ+SLPPY +LD I+ R +EN+ ES I Y V V L+ +EYKRRQ+PV Sbjct: 470 KDQDSLPPYDVLDAIVGRYMENDEPIESIIAAG--YARADVERVTRLIQVNEYKRRQSPV 527 Query: 535 GTKITAKSFGRDRLYPISNKFR 556 G ++T +SFG+D YPI+N+FR Sbjct: 528 GIRVTRRSFGKDWRYPITNRFR 549 >gi|257054803|ref|YP_003132635.1| NAD+ synthetase [Saccharomonospora viridis DSM 43017] gi|256584675|gb|ACU95808.1| NAD+ synthetase [Saccharomonospora viridis DSM 43017] Length = 577 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 226/588 (38%), Positives = 329/588 (55%), Gaps = 45/588 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ+N VGD++GN A G ++LF E+ + GYP EDL + + Sbjct: 1 MPQLRIALAQVNTTVGDLSGNSDLVVEWTRRAASDGAHVVLFPEMALPGYPVEDLALRGA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F +A +A+ L + D G G +VVG+ D G N+V L G ++A + K +LP Sbjct: 61 FTEASRAAVTELATAIADAGHGDVCVVVGYLDADDVGPRNAVAALYRGEVVATQYKHHLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F E+R F G + + + LG+ ICED+W+ L G + + +LNASP Sbjct: 121 NYGVFDERRYFEPGTTLTVLRTHGVDLGLAICEDLWQEGGPVAALGAFGVDLVLALNASP 180 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R +VT + + V P+ Y N VGGQD+L+FDG SF D L + F+E Sbjct: 181 YERAKSDVRVPLVTRRAAEVKAPVAYANLVGGQDDLVFDGGSFVVDADGVLLARAPQFAE 240 Query: 239 QNFMTEWHYDQQLSQWN----------------YMSD---DSASTMYIP-----LQEEEA 274 + + ++ + +SD D Y P L +E Sbjct: 241 HLLVVDLDLPERRGTGDRSRGEARVEGLAVRRRVLSDVPLDPYPVTYRPELAEPLSDEAE 300 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 ++A V++L+DYV+KNNF V++G SGGIDSA+ AA+A DALG + V + +P KY+S Sbjct: 301 IWSALVMALQDYVRKNNFRSVLLGFSGGIDSAVVAALAADALGSDAVYGVSMPSKYSSAH 360 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 S DAA A+ LGC + V P+ ++V + Q + G+ ENIQ+R+RG +LMAL Sbjct: 361 SRSDAAELARRLGCHFRVEPVENIVAAYVD------QLQLEGVAEENIQARVRGMMLMAL 414 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN ++L T NK+E++VGY T+YGD GGF P+KD++KTQV++LA WRN+ G Sbjct: 415 SNMEGHLVLATGNKTELAVGYSTIYGDAVGGFAPIKDVFKTQVWELARWRNAEAEKRGET 474 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-----NDQE 509 P IPP+ + K PSAELRP Q D +SLP Y +LD++++ V + F + D E Sbjct: 475 P---PIPPNSITKPPSAELRPGQLDTDSLPDYALLDELLENYVGGDRGFADLLAAGFDAE 531 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D VR V+ +EYKRRQ P G KIT K+FGRDR P++N + + Sbjct: 532 TVDRVVRMVDR----AEYKRRQYPPGPKITFKAFGRDRRLPLTNAWHE 575 >gi|285017483|ref|YP_003375194.1| nad(+) synthase (glutamine-hydrolyzing) protein [Xanthomonas albilineans GPE PC73] gi|283472701|emb|CBA15206.1| putative nad(+) synthase (glutamine-hydrolyzing) protein [Xanthomonas albilineans] Length = 549 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/574 (39%), Positives = 318/574 (55%), Gaps = 46/574 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFK 59 ML L++A+AQ + VG + N + E+A + G D++LF EL +SGYPPEDL+ + Sbjct: 1 MLSSLRLAMAQFDFPVGAVTQNTDRIMALIEQARDAYGADIVLFPELAVSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C A+ + + H G VVG+P+ V N+ +L G I A K LPN Sbjct: 61 PGFLADCEQAVQRIAACVH--GVVAVVGWPQSAGSVVYNAASVLRDGRIAATYRKRELPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F + VF + R+G++ICED+W + ++ GAE + NAS Sbjct: 119 YAVFDERRYFDVDLDGEHCVFDVKGTRVGLVICEDLWFPEPLAVTVRA-GAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + + Y+N VGGQD L+FDGAS DG ++ F+ Sbjct: 178 PYERGKHAQRDALLAERSRESGAALAYLNVVGGQDALVFDGASVVADGDGRVHPAAAAFT 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ------------EEEADYNACVLSLRD 285 +Q W + D A+ ++PL E + A V ++D Sbjct: 238 DQ--------------WLVVDYDPAARRFVPLHWRCDSDSASEASSEALAWRAVVRGVQD 283 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y +KN F KV +GLSGGIDSAL A+AVDALG ENV + LP +YT+ S + AA + Sbjct: 284 YCRKNGFSKVWLGLSGGIDSALVLAMAVDALGAENVAAVRLPSRYTADLSNDLAAEQCRT 343 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG + + + I + + EN+QSR RG ILMAL+N +LLTT Sbjct: 344 LGVRLETVTIEPAFEGVLQALGPLFDGTQPDVTEENLQSRSRGLILMALANKFGGLLLTT 403 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE +VGY T+YGDM GG+ PLKDLYKT+VF LA+WRN+ T VIPP+++ Sbjct: 404 GNKSEYAVGYATIYGDMCGGYAPLKDLYKTEVFALATWRNTTAATP-------VIPPAVI 456 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEHL 521 ++PSAELR +QTDQ+SLPPY +LD I+ R V+ E S D+ Y E V V L Sbjct: 457 TRAPSAELRANQTDQDSLPPYDVLDGILYRYVDQEAS---RDEIIAAGYAAEVVDQVIRL 513 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +E+KR QA G K++ ++FGR+R YPISN + Sbjct: 514 VRITEWKRHQAAPGPKVSRRAFGRERRYPISNGY 547 >gi|330817967|ref|YP_004361672.1| NAD+ synthetase [Burkholderia gladioli BSR3] gi|327370360|gb|AEA61716.1| NAD+ synthetase [Burkholderia gladioli BSR3] Length = 561 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 235/577 (40%), Positives = 335/577 (58%), Gaps = 39/577 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQLN VGD AGN+A+ A A++ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVARLVEAARAAHKDGAQLLVAPELALSGYPPEDLLLRPAFF 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPRQDQE----------------GVLNSVVILDAG 106 A + A+ L + G ++VG P ++ G N+ ++ G Sbjct: 62 AAAAEALAELAARLAPLEGLAVLVGHPLRESSADGNANRPIERGAAPVGTYNAASLIVGG 121 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLK 164 ++A K +LPN F EKR F + P VF R GI+ICEDIW +++ + K Sbjct: 122 EVVATYRKQDLPNTEVFDEKRYFAT--DPQPCVFELNGTRFGIVICEDIW-HASAAQLAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GAE L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF D Sbjct: 179 AAGAEVLLVPNGSPYHMNKDAVRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 +L +M F E + + E+ + L + L E Y A VL +R Sbjct: 239 AAGELVARMAQFEEGHAIVEFEGARPLP----------GEIAPALSTEAQVYRALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGALIGLSGGVDSALVLAVACDALGPDRVRAVMMPSRYTADISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 +G +YD + I + + F SL ++F E ENIQ+RIRG +LMALSN +++L Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAAEFAGREEDA-TEENIQARIRGTLLMALSNKFGSIVL 407 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ + G L VIP Sbjct: 408 TTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNA---AAEFGRLA-VIPER 463 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLP Y LD I++ +E + Y++ V V L+ Sbjct: 464 ILTRAPSAELRENQTDQDSLPSYDALDAIMRMYMEEDRPLAEIVAAGYDEADVTRVTRLI 523 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAP+G ++T ++FGRD YPI+++F + I Sbjct: 524 KINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERI 560 >gi|121604614|ref|YP_981943.1| NAD+ synthetase [Polaromonas naphthalenivorans CJ2] gi|120593583|gb|ABM37022.1| NAD+ synthetase [Polaromonas naphthalenivorans CJ2] Length = 565 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 233/576 (40%), Positives = 323/576 (56%), Gaps = 40/576 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKI +AQLN VGD+ GN K A A ++G L+L E+ I GY EDL + SFIQ Sbjct: 3 LKICVAQLNYCVGDMPGNAQKIIAAARTAYQEGARLVLTPEMAICGYAAEDLFLRPSFIQ 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG------------VLNSVVILDAGNIIAV 111 AC A++ + + G +VVG P G N+ +L G +I Sbjct: 63 ACDDAVNQVARELAGLKGLTVVVGTPVHGDSGKGLRTKSVAVQQRQNAARVLREGRVIET 122 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRD---------IRLGILICEDIWKNSNICKH 162 K LPNY F E+R F G VF+ + +G+LICED W + Sbjct: 123 YAKRELPNYQVFDERRYFAPGQGT--CVFQATGDEEGDEAVSIGLLICEDAWFEEP-ARL 179 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 ++ GAE L +NASP++ K +R ++ + LP++Y + VGGQDE++F+G SF Sbjct: 180 AQQAGAELLVVINASPFHVGKGSEREVMMRERCLATGLPLVYAHLVGGQDEIVFEGHSFA 239 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVL 281 LA + + F E F + Q + ++D +PL+ EAD ++A VL Sbjct: 240 LQADGALAGRAESFKENLFFAQAGRAQ--AAIELVAD------AVPLRSAEADLWDALVL 291 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 +RDY+ KN F IIGLSGGIDSAL AIAVDALG + V+T+M+P YT+ S DA Sbjct: 292 GVRDYLGKNGFPGAIIGLSGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARE 351 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A+ + +YD + I F + ++ + ENIQ+RIRG LMALSN ++ Sbjct: 352 MAERMKVRYDEISIVPEFEAFKASLAGEFKGRAEDTTEENIQARIRGVFLMALSNKFGSI 411 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVI 460 +LTT NKSE++ GY TLYGDM+GGF +KDL KT VF+LA WRN + +G P I Sbjct: 412 VLTTGNKSEMATGYCTLYGDMAGGFAVIKDLLKTTVFRLARWRNENDPYGTGGSP----I 467 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYVE 519 P I+ + PSAELR QTDQ+SLPPY +LD I+KR +EN++S + V V Sbjct: 468 PERIITRPPSAELRADQTDQDSLPPYEVLDAILKRYMENDQSVEAVVAAGFERAVVERVA 527 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +EYKRRQAPVG +++ +SFG+D YPI++KF Sbjct: 528 RLIRINEYKRRQAPVGIRVSHRSFGKDWRYPITSKF 563 >gi|294625816|ref|ZP_06704433.1| NAD + synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599891|gb|EFF44011.1| NAD + synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 546 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 230/572 (40%), Positives = 320/572 (55%), Gaps = 44/572 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPP 53 M + L+IA+AQ + VG + N IA AR E D++LF EL ISGYPP Sbjct: 1 MSQTLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPP 54 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 EDL+ + F+ C A+ + + TH G VVG+P+ V N+ +L G I A Sbjct: 55 EDLLLRPGFLAHCEQALARIAAATH--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYR 112 Query: 114 KINLPNYSEFHEKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 K LPNY+ F E+R F DP + + +R+G++ICED+W + ++ G Sbjct: 113 KRELPNYAVFDERRYF----DVDPDGENCVVTVKGVRVGVVICEDLWFAEPLANTVRA-G 167 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 AE + NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG Sbjct: 168 AELVLVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDG 227 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 + F +Q + ++ ++ DD +M + + A V L+DY Sbjct: 228 TVHPAAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYC 281 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 KN F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG Sbjct: 282 HKNGFSKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALG 341 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K + + I + + I EN+QSR RG ILMALSN ++LTT N Sbjct: 342 VKLETIAIEPAFEGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGN 401 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + Sbjct: 402 KSEYAVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISR 454 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYG 524 PSAELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ Sbjct: 455 PPSAELRDNQTDQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRL 512 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +E+KR Q+ G K++ ++FGR+R YPI+N +R Sbjct: 513 NEWKRHQSAPGPKVSRRAFGRERRYPITNGYR 544 >gi|221205734|ref|ZP_03578749.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD2] gi|221174572|gb|EEE07004.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD2] Length = 593 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 232/580 (40%), Positives = 336/580 (57%), Gaps = 38/580 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 25 KTRLALAQINVTVGDFAGNVARIVAAARAAHEDGAHLMIAPELALSGYPPEDLLLRPAFY 84 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV-----------------LNSVVILDA 105 ++A+D L G ++VG P + GV N+ ++ Sbjct: 85 AEAAAALDALADALKPLDGLAVLVGHPLRGAPGVDGNANRPIERGVPPVDTYNAASLIVG 144 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + +P+VF ++ G++ICED W +++ + Sbjct: 145 GRIVGTYRKQDLPNAEVFDEKRYFAT--DAEPLVFELNGVKFGVIICEDAW-HASAAQIA 201 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 202 KAAGAQVLLIPNGSPYHMNKEAMRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 261 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 DGQ L QM F E + + E+ + L + PL + Y A VL + Sbjct: 262 DGQGTLVAQMPQFDEGHAIVEFDGARPLP----------GAIASPLPVDAQVYRALVLGV 311 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 312 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAADMA 371 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++L Sbjct: 372 RRVGVRYDEIAIAPMFDAFRAALAAEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 431 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ TS G ++IP Sbjct: 432 TTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNA---TSDYG-RRDIIPER 487 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 488 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 547 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 +EYKRRQAP+G ++T ++FGRD YPI+++F + + E Sbjct: 548 KLNEYKRRQAPIGIRVTHRAFGRDWRYPITSRFAERLGER 587 >gi|221199364|ref|ZP_03572408.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD2M] gi|221180649|gb|EEE13052.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD2M] Length = 570 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 232/580 (40%), Positives = 336/580 (57%), Gaps = 38/580 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHEDGAHLMIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV-----------------LNSVVILDA 105 ++A+D L G ++VG P + GV N+ ++ Sbjct: 62 AEAAAALDALADALKPLDGLAVLVGHPLRGAPGVDGNANRPIERGVPPVDTYNAASLIVG 121 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + +P+VF ++ G++ICED W +++ + Sbjct: 122 GRIVGTYRKQDLPNAEVFDEKRYFAT--DAEPLVFELNGVKFGVIICEDAW-HASAAQIA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 179 KAAGAQVLLIPNGSPYHMNKEAMRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 DGQ L QM F E + + E+ + L + PL + Y A VL + Sbjct: 239 DGQGTLVAQMPQFDEGHAIVEFDGARPLP----------GAIASPLPVDAQVYRALVLGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 289 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAADMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRAALAAEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ TS G ++IP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNA---TSDYG-RRDIIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 +EYKRRQAP+G ++T ++FGRD YPI+++F + + E Sbjct: 525 KLNEYKRRQAPIGIRVTHRAFGRDWRYPITSRFAERLGER 564 >gi|167561982|ref|ZP_02354898.1| NAD synthetase [Burkholderia oklahomensis EO147] Length = 566 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 233/581 (40%), Positives = 336/581 (57%), Gaps = 42/581 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAARAAHDAGAQLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEGV-----LNSVV 101 + ++ + G ++VG P R + GV N+ Sbjct: 62 AASDAALAELAALLKPLAGLAVLVGHPQRAAGSGASSADGNANRPIERGVSPTDTYNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + P VF ++ G++ICED+W +++ Sbjct: 122 LIVDGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVKFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP+IYVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMIYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E N + E+ + L + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGNAVVEFDGARPLP----------ARIAPELSVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL + DY+ KN F IIGLSGG+DSAL A+AVDALG + V+ +M+P +YT+ S DA Sbjct: 289 VLGVHDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGADRVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 AA AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 AAMAKRVGVRYDEIAIAPMFDAFRTSLAGEFAGRAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGKL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFTESI 565 >gi|21243946|ref|NP_643528.1| NAD synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|21109556|gb|AAM38064.1| NH3-dependent NAD synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 546 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 230/572 (40%), Positives = 321/572 (56%), Gaps = 44/572 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPP 53 M + L+IA+AQ + VG +A N IA AR E D++LF EL ISGYPP Sbjct: 1 MSQTLRIAMAQFDFPVGGVAQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPP 54 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 EDL+ + F+ C A+ + + T G VVG+P+ V N+ +L G I A Sbjct: 55 EDLLLRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYR 112 Query: 114 KINLPNYSEFHEKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 K LPNY+ F E+R F DP + + +R+G++ICED+W + ++ G Sbjct: 113 KRELPNYAVFDERRYF----DVDPDGENCVVTVKGVRVGVVICEDLWFAEPLANTVRA-G 167 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 AE + NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG Sbjct: 168 AELVLVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDG 227 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 + F +Q + ++ ++ DD +M + + A V L+DY Sbjct: 228 TVHPAAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYC 281 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +KN F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG Sbjct: 282 RKNGFSKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALG 341 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K + + I + + I EN+QSR RG ILMALSN ++LTT N Sbjct: 342 VKLETIAIEPAFEGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGN 401 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + Sbjct: 402 KSEYAVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISR 454 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYG 524 PSAELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ Sbjct: 455 PPSAELRDNQTDQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRL 512 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +E+KR Q+ G K++ ++FGR+R YPI+N +R Sbjct: 513 NEWKRHQSAPGPKVSRRAFGRERRYPITNGYR 544 >gi|145595855|ref|YP_001160152.1| NAD+ synthetase [Salinispora tropica CNB-440] gi|145305192|gb|ABP55774.1| NH(3)-dependent NAD(+) synthetase [Salinispora tropica CNB-440] Length = 598 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 334/597 (55%), Gaps = 54/597 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q+NP VGD+AGN R A G LI F EL ++GYP EDLVF++S Sbjct: 1 MTTLRLALCQVNPNVGDLAGNATIIREWARRAADAGAQLIAFPELTLTGYPVEDLVFRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-----PRQ---DQE---GVLNSVVILDAGN 107 F+ A +A+D L +D G G +VVG+ P Q D E G N+ +L G Sbjct: 61 FVAASKAALDELAADLAADGLGDLAVVVGYLDADGPPQVNGDAEPGHGARNAAALLHGGK 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 +A K +LPNY F E R F+ G + + + + + ICED+W+ ++ G Sbjct: 121 TVATYFKHHLPNYGVFDEDRYFVPGETLSVVRVGGVDVTLTICEDLWQVGGPFAAARQAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + ++N SPY NK R +V + + I YVN VGGQDEL+F+G S + Sbjct: 181 VGLVLNINGSPYELNKDDVRLPLVRRRAAEAKATIAYVNMVGGQDELVFEGDSMIVAAEG 240 Query: 228 QLAFQMKHFSEQNFMTEWHY---------DQQLSQWNYM------------SDD-SASTM 265 +L + F E + + D +L+ + +D +AS + Sbjct: 241 ELLARAPQFVEHLLVHDLDLPAAADGPPADIELADGMRVLHRCIGSLPAAPTDTLAASEI 300 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 P +E + A +L LRDYV KN+F V++GLSGGIDS++ AA+AVDALG + V + Sbjct: 301 AEPAADEAEVWQALLLGLRDYVDKNHFPSVVLGLSGGIDSSVVAALAVDALGADRVVGVS 360 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 LP +++S S EDAA AK G Y + PI +V F + +S SG+ EN+Q+R Sbjct: 361 LPSQHSSEHSREDAAELAKRTGLDYRIEPIQPIVETFLANLSL------SGLSVENLQAR 414 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +RG ILMALSN ++LTT NKSE++VGY TLYGD GGFNP+KD++KT ++QLA WRN Sbjct: 415 VRGVILMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGFNPVKDVWKTLIWQLARWRN 474 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ES 502 + + G P IP + + K PSAEL P Q D ++LP Y +LD I+ ++ + + Sbjct: 475 AEAVRRGETP---PIPENSISKPPSAELSPGQLDSDTLPEYDLLDPILVGYIDGDLGRDG 531 Query: 503 FI--NNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 I +D D+ +R V+ +EYKRRQ+ GTKI+ K+FGRDR PI+N++R+ Sbjct: 532 LIEAGHDPALVDQVLRMVDT----AEYKRRQSAPGTKISMKAFGRDRRLPITNRWRE 584 >gi|302524481|ref|ZP_07276823.1| glutamine-dependent NAD(+) synthetase [Streptomyces sp. AA4] gi|302433376|gb|EFL05192.1| glutamine-dependent NAD(+) synthetase [Streptomyces sp. AA4] Length = 590 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 224/585 (38%), Positives = 334/585 (57%), Gaps = 38/585 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ+N VGDI GN A +A G +++F E+ +GYP EDL +++ Sbjct: 18 MPQLRIALAQVNTTVGDIDGNTALTVEWTRKAAEAGAHVVVFPEMSQTGYPVEDLTLRRT 77 Query: 62 FIQACSSAIDTLKSDTHDGGAGIV---VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F A ++ L + G G V VG+ D+ G ++ L G ++A + K +LP Sbjct: 78 FADASRRSVTELARRLDEAGCGEVLAYVGYLDHDEVGPRDAAAALYRGEVVARQFKHHLP 137 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F E R F G + + + +G++ICEDIW++ L K G + + + NASP Sbjct: 138 NYGVFDEHRYFKPGTELEVLRLHGVDIGMVICEDIWQDGGPISALGKAGVDLVVAPNASP 197 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y +K ++R ++ + + P++Y NQVGGQD+L+FDG S L + F E Sbjct: 198 YERSKDEQRLPLIARRAAEAGAPLVYTNQVGGQDDLVFDGDSLVVGADGTLLARAPQFVE 257 Query: 239 QNFM------------------TEWH----YDQQLSQWNYMSDDSASTMYIPLQEEEADY 276 + E H D L++++ + +A T+ PL +E + Sbjct: 258 HLLVLDLDVPASGAAATGSFEGLEVHRRVLTDSPLAEYSPL---AAPTISEPLSDEAEVW 314 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 +A V+ LRDYV KN F V G SGGIDSA+CAA+A DALG +NV + +P KY+S S Sbjct: 315 SALVVGLRDYVHKNGFSTVTFGFSGGIDSAVCAALAADALGGDNVYGVSMPSKYSSSHSR 374 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 +DA+ A+ +G Y V PI D+V+ + + Q + +G+ ENIQ+R+RG +LMALSN Sbjct: 375 DDASDLAERIGAHYRVEPIGDMVDVYVN------QLQLTGLAEENIQARVRGMLLMALSN 428 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++L T NK+E++VGY T+YGD G F P+KDL+KT V+QLA WRN G P Sbjct: 429 LDGHLVLATGNKTELAVGYSTIYGDAVGAFAPIKDLFKTHVWQLARWRNEEAAKRGETP- 487 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETV 515 IP + + K PSAELRP Q D +SLP Y +LDD++ VEN+ + + + ++ ET+ Sbjct: 488 --PIPENSITKPPSAELRPDQKDSDSLPDYELLDDVLDDYVENDRGYADLIEAGFDPETI 545 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 V ++ +EYKRRQ P GTKIT K+FGRDR P++N +R+ S Sbjct: 546 DRVVRMVDRAEYKRRQYPPGTKITFKAFGRDRRLPMTNGWRERKS 590 >gi|300783141|ref|YP_003763432.1| NAD+ synthase (glutamine-hydrolysing) [Amycolatopsis mediterranei U32] gi|299792655|gb|ADJ43030.1| NAD+ synthase (glutamine-hydrolysing) [Amycolatopsis mediterranei U32] Length = 573 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 224/587 (38%), Positives = 330/587 (56%), Gaps = 48/587 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 + +L+IA+AQ+NP VGD+ GN + RRA E G +++F E+ ++GYP EDL Sbjct: 1 MPQLRIALAQVNPTVGDLDGNADLHVEWTRRAAE----AGAHVVVFPEMSLTGYPIEDLS 56 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIV---VGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 +K+F A +++L + G G V VG+ D G ++ L G I+A + K Sbjct: 57 LRKTFAAASRQGLESLARRLDEAGCGEVLTYVGYLDLDDVGPRDAAAALYRGEIVARQFK 116 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 +LPNY F E R + G + D + F + +G++ICED+W++ L + G + + + Sbjct: 117 HHLPNYGVFDEHRWYKPGTTLDVVRFHGLDIGMVICEDLWQDGGPISALGRAGVDLVVAP 176 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY +K ++R ++ + + P++Y NQ+GGQD+L+FDG S L + Sbjct: 177 NASPYERSKDEQRLPLIARRAAEAGAPLVYTNQIGGQDDLVFDGDSLVVGADGTLLARAP 236 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI-----------------------PLQE 271 F E + D L + Y D S +++ PL + Sbjct: 237 QFVEHLLV----LDMDLPKTGYAGDGSYEGLHVRRHVLSEEPLPAYEPTATPVISEPLSD 292 Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 E ++A V+ LRDYV KN F VI G SGGIDSA+CAA+A DALG NV + +P KY+ Sbjct: 293 EAEVWHALVIGLRDYVHKNGFSSVIFGFSGGIDSAVCAALAADALGGGNVYGVSMPSKYS 352 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 S S +DAA A+ +G Y V P+ D+V + +S +G+ ENIQ+R RG +L Sbjct: 353 SGHSKDDAADLAQRIGAHYRVEPVEDMVRVYVDQLSL------TGLAEENIQARTRGMLL 406 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 MALSN ++L T NK+E++VGY T+YGD G F P+KD++KT V+QLA WRN Sbjct: 407 MALSNLDGHLVLATGNKTELAVGYSTIYGDAVGAFAPIKDVFKTHVWQLARWRNDTAAKR 466 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEY 510 G P IP + + K PSAELRP Q D +SLP Y +LDDI+ VE + + + + Sbjct: 467 GETP---PIPENSITKPPSAELRPGQVDTDSLPDYALLDDILDDYVEGDRGYADLVSAGF 523 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + ET+ V ++ +EYKRRQ P GTKIT K+FGRDR P++N +R+ Sbjct: 524 DPETIDRVVRMVDKAEYKRRQYPPGTKITFKAFGRDRRLPMTNLWRE 570 >gi|254181374|ref|ZP_04887971.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1655] gi|184211912|gb|EDU08955.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1655] Length = 609 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 237/590 (40%), Positives = 341/590 (57%), Gaps = 56/590 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 43 VMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 F-IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNS 99 F + ++ G ++VG P R + G N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS 157 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W ++ Sbjct: 163 ASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HA 219 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FD Sbjct: 220 SAAQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFD 279 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEE 273 G SF DG +L +M F E + + E+ D A + P L E Sbjct: 280 GGSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEA 325 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 326 QVYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAD 385 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNI 390 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG + Sbjct: 386 ISTTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTL 442 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 443 LMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEY 502 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 503 GAL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAG 558 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 559 YAEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|289667066|ref|ZP_06488141.1| NAD synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 551 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 230/564 (40%), Positives = 319/564 (56%), Gaps = 36/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 L+IA+AQ + VG +A N IA AR E D++LF EL ISGYPPEDL+ Sbjct: 10 LRIAMAQFDFPVGAVAQNTDRIIEHIAAARDEFE------ADIVLFPELAISGYPPEDLL 63 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + T G VVG+P+ V N+ +L G I A K L Sbjct: 64 LRPGFLAHCEEALGRIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKREL 121 Query: 118 PNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 PNY+ F E+R F D VF + +++G++ICED+W + +K + AE + N Sbjct: 122 PNYAVFDERRYFDVDPDGDNCVFTVKGVQVGVVICEDLWFAEPLANTVKAR-AELVLVPN 180 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 181 ASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAA 240 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F +Q + ++ ++ DD +M + + A V L+DY +KN F KV Sbjct: 241 FVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYCRKNGFSKV 294 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSAL AIAVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 295 WLGLSGGIDSALVLAIAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETIAI 354 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY Sbjct: 355 EPAFEGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGY 414 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + PSAELR Sbjct: 415 ATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISRPPSAELRD 467 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQA 532 +QTDQ+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ +E+KR Q+ Sbjct: 468 NQTDQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRLNEWKRHQS 525 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 G K++ ++FGR+R YPI+N +R Sbjct: 526 APGPKVSRRAFGRERRYPITNGYR 549 >gi|167901780|ref|ZP_02488985.1| NAD synthetase [Burkholderia pseudomallei NCTC 13177] Length = 567 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 237/589 (40%), Positives = 340/589 (57%), Gaps = 57/589 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP-----------------RQDQEG-----VLNSV 100 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRVAGGAAASSADGNANRPIERGAAPVDTYNAA 121 Query: 101 VILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSN 158 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W +++ Sbjct: 122 SLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HAS 178 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AAQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDG 238 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEA 274 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 GSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEAQ 284 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 285 VYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADI 344 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +L Sbjct: 345 STTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLL 401 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 MALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 MALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYG 461 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEY 510 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 AL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGY 517 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 AEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 566 >gi|237811352|ref|YP_002895803.1| glutamine-dependent NAD+ synthetase [Burkholderia pseudomallei MSHR346] gi|237506688|gb|ACQ99006.1| glutamine-dependent NAD+ synthetase [Burkholderia pseudomallei MSHR346] Length = 566 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 237/588 (40%), Positives = 340/588 (57%), Gaps = 56/588 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNSVV 101 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W +++ Sbjct: 122 LIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEAD 275 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEAQV 284 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S Sbjct: 285 YRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADIS 344 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILM 392 DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LM Sbjct: 345 TTDAADMAKRVGVRYDEIAIAPMFDAFRTSLAAEFAGLAEDAT---EENIQARIRGTLLM 401 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 ALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGA 461 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYN 511 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 L----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYA 517 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 EADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|254190774|ref|ZP_04897281.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei Pasteur 52237] gi|157938449|gb|EDO94119.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei Pasteur 52237] Length = 609 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 237/590 (40%), Positives = 341/590 (57%), Gaps = 56/590 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 43 VMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 F-IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNS 99 F + ++ G ++VG P R + G N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS 157 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W ++ Sbjct: 163 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HA 219 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FD Sbjct: 220 SAAQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFD 279 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEE 273 G SF DG +L +M F E + + E+ D A + P L E Sbjct: 280 GGSFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEA 325 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ Sbjct: 326 QVYRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAD 385 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNI 390 S DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG + Sbjct: 386 ISTTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTL 442 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 443 LMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEY 502 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 503 GAL----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAG 558 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 559 YAEADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|188990496|ref|YP_001902506.1| putative bifunctional NAD(+) synthase (glutamine-hydrolyzing) / nitrilase [Xanthomonas campestris pv. campestris str. B100] gi|167732256|emb|CAP50448.1| putative bifunctional NAD(+) synthase (glutamine-hydrolyzing) / nitrilase [Xanthomonas campestris pv. campestris] Length = 552 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 228/560 (40%), Positives = 318/560 (56%), Gaps = 30/560 (5%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 L+IA+AQ + VG + N I AR+E + D++LF EL ISGYPPEDL+ + Sbjct: 11 LRIAMAQFDFPVGAVTQNTDRIIEYIAAARDEFD---ADIVLFPELAISGYPPEDLLLRP 67 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ C A+ + + T G VVG+P+ V N+ +L G I A K LPNY Sbjct: 68 GFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLREGRIEATYRKRELPNY 125 Query: 121 SEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + F E+R F D V + +++G++ICED+W + K ++ GAE + NASP Sbjct: 126 AVFDERRYFDVDPDGDNCVVTVKGVQVGVVICEDLWFAEPLAKTVQA-GAELVLVPNASP 184 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K +R ++ + I Y+N VGGQD L+FDGAS DG + F + Sbjct: 185 YERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVD 244 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 Q + ++ ++ DD +M + + A V L+DY KN F KV +G Sbjct: 245 QWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLKDYCGKNGFRKVWLG 298 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A+AVDALG ENV + LP +YT+ S + A +ALG K + + I Sbjct: 299 LSGGIDSALVLAMAVDALGGENVTAVRLPSRYTAGLSNDLAEEQCRALGVKLETIAIEPA 358 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T+ Sbjct: 359 FEGLLAALGPLFADTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYATI 418 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + PSAELR +QT Sbjct: 419 YGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISRPPSAELRDNQT 471 Query: 479 DQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVG 535 DQ+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ +E+KR QA G Sbjct: 472 DQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRLNEWKRHQAAPG 529 Query: 536 TKITAKSFGRDRLYPISNKF 555 K++ ++FGR+R YPI+N + Sbjct: 530 PKVSRRAFGRERRYPITNGY 549 >gi|117928126|ref|YP_872677.1| NH(3)-dependent NAD(+) synthetase [Acidothermus cellulolyticus 11B] gi|117648589|gb|ABK52691.1| NH(3)-dependent NAD(+) synthetase [Acidothermus cellulolyticus 11B] Length = 591 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 226/594 (38%), Positives = 320/594 (53%), Gaps = 53/594 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ++PVVGDIAGN+ + A + L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALAQVDPVVGDIAGNLELVVAWTKHAASRSAHLVAFPEMMLTGYPVEDLALRPS 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVGF--------PRQDQEGV-LNSVVILDAGNII 109 F+ A A+ L G G++VG+ PR G+ +S L G ++ Sbjct: 61 FVAASRRAVVELAERLAREGLGNIGVIVGYLDAAPDDRPRPGGRGLPTDSAAFLIGGRVV 120 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 A DK +LPNY F E R F G + + + + ICED+W++ G Sbjct: 121 ARYDKHHLPNYGVFDEYRYFSRGERLVVVRHLGVDIAMTICEDLWQDGGPLTAAWAAGVG 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + ++N SPY K R + + + V PI YVN VGGQDEL+FDG SF D Sbjct: 181 LVVTINGSPYERGKPDARLRLAQRRAAEVRAPIAYVNMVGGQDELVFDGDSFVVDADGTP 240 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNY---MSDDSASTM------------YIP------ 268 + F E + + S+ + D S T+ Y P Sbjct: 241 LVRAPQFDEGLAVIDLSLQPGTSRRRGSVDVRDGSRMTIERVDLKTPSLPDYPPAPTGLA 300 Query: 269 --LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 L E Y A V RDY++KN F V++GLSGGIDSAL IAVDA+G E V T+ + Sbjct: 301 ARLAPEAEVYAALVTGTRDYIRKNRFRSVLVGLSGGIDSALVTTIAVDAIGAEAVHTVAM 360 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +++S SL DA A+ G ++ V+PI D+V+ F + G+ AEN+Q+R+ Sbjct: 361 PSRWSSDHSLADAEELARRQGTRHTVIPITDMVDAFERHLDLH------GLAAENLQARV 414 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG ILM+LSN ++LTT NKSE++ GY TLYGD +GGF PLKD+ KT V++LA WRN+ Sbjct: 415 RGTILMSLSNEHGHLVLTTGNKSELATGYSTLYGDSAGGFAPLKDVPKTLVWELARWRNA 474 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES---- 502 SG P IP ++K PSAELRP Q D +SLPPYP LD +++ VE++ S Sbjct: 475 QAERSGAVP---PIPQRCIDKPPSAELRPGQLDTDSLPPYPELDAVLRLYVEHDASRDDI 531 Query: 503 -FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +D D +R V++ +EYKRRQ P G KIT ++FGRDR PI+N++ Sbjct: 532 VAAGHDPFLVDRVIRLVDN----AEYKRRQYPPGPKITTRNFGRDRRLPITNRW 581 >gi|76809184|ref|YP_332653.1| NAD synthetase [Burkholderia pseudomallei 1710b] gi|126451553|ref|YP_001065369.1| NAD synthetase [Burkholderia pseudomallei 1106a] gi|242316719|ref|ZP_04815735.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1106b] gi|254259592|ref|ZP_04950646.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1710a] gi|76578637|gb|ABA48112.1| glutamine dependent NAD+ synthetase [Burkholderia pseudomallei 1710b] gi|126225195|gb|ABN88735.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1106a] gi|242139958|gb|EES26360.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1106b] gi|254218281|gb|EET07665.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1710a] Length = 566 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 237/588 (40%), Positives = 340/588 (57%), Gaps = 56/588 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEG-----VLNSVV 101 + ++ G ++VG P R + G N+ Sbjct: 62 AASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + P VF +R G++ICED+W +++ Sbjct: 122 LIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEAD 275 SF DG +L +M F E + + E+ D A + P L E Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEF--------------DGARALPAPIAPALPVEAQV 284 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S Sbjct: 285 YRALVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADIS 344 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILM 392 DAA AK +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LM Sbjct: 345 TTDAADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLLM 401 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 402 ALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGA 461 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYN 511 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 462 L----DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYA 517 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V+ V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 518 EADVKRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|257060879|ref|YP_003138767.1| NAD synthetase [Cyanothece sp. PCC 8802] gi|256591045|gb|ACV01932.1| NAD+ synthetase [Cyanothece sp. PCC 8802] Length = 561 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 230/578 (39%), Positives = 330/578 (57%), Gaps = 46/578 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP +GD+ N K A A Q + L+L EL + GYPP DL+ SFI+ Sbjct: 1 MKIAIAQLNPTIGDLVNNAHKILNAANLAASQNVRLLLTPELSLCGYPPRDLLLYPSFIK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 + + + L A ++VG + ++ + NS +L+ G + + K L Sbjct: 61 SLTLELQELAQKLPSQLA-VLVGTVTPNNAAAINGEKPLFNSAALLENGEVKQLFHKCLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPI-VFRD------IRLGILICEDIWKNS----------NIC 160 PNY F E R F SG + +F D I++G+ ICED+W + N Sbjct: 120 PNYDVFDEHRYFESGKQPNYFELFLDDHSSEPIKIGVTICEDLWNDEQFWQKRHYQQNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 K L G + + +L+ASPYY K K R ++ + +P+IYVNQ+GG DELIFDG S Sbjct: 180 KTLANLGVDLIVNLSASPYYLGKPKLRETMLQHSSKYYQIPLIYVNQIGGNDELIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN--YMSDDSASTMYIPLQEEEADYNA 278 F + ++ + K F+E D ++ WN + AS P EEE ++A Sbjct: 240 FVVNEHGEIVLKAKSFAE---------DVKIFTWNKSFKKIVLASVNNFPNTEEEEIWSA 290 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 VL ++DY QK F KVI+GLSGGIDSAL AAIA +A+G NV I++P Y+S SL+D Sbjct: 291 LVLGVKDYAQKCQFSKVILGLSGGIDSALVAAIATEAIGANNVLGILMPSPYSSDHSLKD 350 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A K LG + LPI ++ + +L++ GI EN+Q+RIRGN+LMA++N Sbjct: 351 AEKLVKNLGINHQTLPISGIMKTYDNLLNPLFSGTQFGIAEENLQARIRGNLLMAIANKF 410 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +LL+T NKSEI+VGY TLYGDM+GG + D+ KT+VF L W N H E Sbjct: 411 GYLLLSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTRVFSLCHWLNRH---------QE 461 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRY 517 +IP +IL K PSAEL+P+QTDQ+SLPPY ILD+I++R + + +SF + +N V+ Sbjct: 462 IIPHNILIKPPSAELKPNQTDQDSLPPYEILDEILERRINHHQSFDEICEAGFNANIVQK 521 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V L+ +E+KR+QAP+ K+T K+FG PI+++ Sbjct: 522 VLKLVARAEFKRKQAPLVLKVTDKAFGTGWRMPIASQI 559 >gi|326560148|gb|EGE10537.1| NAD+ synthetase [Moraxella catarrhalis 103P14B1] Length = 517 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/525 (41%), Positives = 305/525 (58%), Gaps = 19/525 (3%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 +A +G D+++F EL + GYPPEDL+ + + + A+ L G +++G+P Sbjct: 7 DAKARGADIVIFPELALVGYPPEDLLLRPTLGERVREAMAKLAEIE---GIVVILGYPHI 63 Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICE 151 D G NS IL G+ K LPNY F E+R F G + ++ + +G+LICE Sbjct: 64 DHHGTFNSAAILQDGSQKGFYHKQCLPNYGIFDEQRYFQKGLNQVLFDYKGVTIGLLICE 123 Query: 152 DIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ 211 DIW + I + LK+ GA+ + +NASP+ K R ++T S HLPIIYVN VG Q Sbjct: 124 DIWHDEPI-QALKQAGADLVIVINASPFEIGKQTARKSLLTRHSSTHHLPIIYVNTVGAQ 182 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE 271 D+++FDG S ++A + F Q M +D Q + D+ + + L E Sbjct: 183 DDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA--RFDTQNKTF-----DTQAKAPLVLSE 235 Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 E Y A V+ LRDYV ++ F VI+GLSGGIDSAL IAVDALG + V +M+PY+YT Sbjct: 236 ESEMYQALVVGLRDYVNRSGFKGVIVGLSGGIDSALTLCIAVDALGCDRVYAVMMPYEYT 295 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 + SLEDA A A L Y V PIHD V S ++ L + EN+Q+R RG IL Sbjct: 296 AQISLEDAEAQAARLNVSYTVCPIHDAVAGLRSALAPLLANSEPDVTEENLQARARGTIL 355 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 MALSN M+++T NKSE +VGY TLYGDM GGF+ LKD+YKT V++LA++RN Sbjct: 356 MALSNKFGHMVISTGNKSENAVGYSTLYGDMVGGFDVLKDVYKTDVYRLANYRNRL---- 411 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEY 510 VIP ++ + PSAELRP+Q DQ+SL Y LD I+K ++++ + + Sbjct: 412 ---EDNPVIPERVITRPPSAELRPNQKDQDSLGDYETLDSILKMYIDDDLGYKAIVAAGF 468 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +TV + ++ +EYKRRQ +GTKIT KSFGR+R YP+ N + Sbjct: 469 EPKTVEKILSMVDRAEYKRRQGAIGTKITKKSFGRERRYPLVNGW 513 >gi|21232521|ref|NP_638438.1| NAD synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767395|ref|YP_242157.1| NAD synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|21114312|gb|AAM42362.1| NH3-dependent NAD synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572727|gb|AAY48137.1| NH3-dependent NAD synthetase [Xanthomonas campestris pv. campestris str. 8004] Length = 552 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 229/563 (40%), Positives = 317/563 (56%), Gaps = 36/563 (6%) Query: 5 LKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 L+IA+AQ + VG + N IA AR E D++LF EL ISGYPPEDL+ Sbjct: 11 LRIAMAQFDFPVGAVTQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPPEDLL 64 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + T G VVG+P+ V N+ +L G I A K L Sbjct: 65 LRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLREGRIEATYRKREL 122 Query: 118 PNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 PNY+ F E+R F D V + +++G++ICED+W + K ++ GAE + N Sbjct: 123 PNYAVFDERRYFDVDPDGDNCVVTVKGVQVGVVICEDLWFAEPLAKTVQA-GAELVLVPN 181 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 182 ASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAA 241 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F +Q + ++ ++ DD +M + + A V L+DY KN F KV Sbjct: 242 FVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLKDYCGKNGFRKV 295 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSAL A+AVDALG ENV + LP +YT+ S + A +ALG K + + I Sbjct: 296 WLGLSGGIDSALVLAMAVDALGGENVTAVRLPSRYTAGLSNDLADEQCRALGVKLETIAI 355 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY Sbjct: 356 EPAFEGLLAALGPLFADTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGY 415 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + PSAELR Sbjct: 416 ATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISRPPSAELRD 468 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQA 532 +QTDQ+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ +E+KR QA Sbjct: 469 NQTDQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRLNEWKRHQA 526 Query: 533 PVGTKITAKSFGRDRLYPISNKF 555 G K++ ++FGR+R YPI+N + Sbjct: 527 APGPKVSRRAFGRERRYPITNGY 549 >gi|325922862|ref|ZP_08184586.1| DNA-directed RNA polymerase, subunit H [Xanthomonas gardneri ATCC 19865] gi|325546655|gb|EGD17785.1| DNA-directed RNA polymerase, subunit H [Xanthomonas gardneri ATCC 19865] Length = 546 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 227/567 (40%), Positives = 322/567 (56%), Gaps = 36/567 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPP 53 M + L+IA+AQ + VG +A N IA AR + G D++LF EL ISGYPP Sbjct: 1 MSQTLRIAMAQFDFPVGAVARNTDRIIEFIAAAR------DEFGADIVLFPELAISGYPP 54 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 EDL+ + F+ C A+ + ++T G VVG+P+ V N+ +L G+I A Sbjct: 55 EDLLLRPGFLAHCEEALARIAANTR--GIVAVVGWPQSAGSVVYNAASVLRDGSIAATYR 112 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 K LPNY+ F E+R F D V + +++G++ICED+W + ++ GAE + Sbjct: 113 KRELPNYAVFDERRYFDVDPDGDNCVVTVKGVQVGVVICEDLWFAEPLAGTVQA-GAELV 171 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K +R ++ + I Y+N VGGQD L+FDGAS D + Sbjct: 172 LVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADADGTVHP 231 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F +Q + ++ ++ DD +M + + A V L+DY +KN Sbjct: 232 AAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYCRKNG 285 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + Sbjct: 286 FTKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLE 345 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + + + EN+QSR RG ILMALSN +LLTT NKSE Sbjct: 346 TIAIEPAFEGLLAALGPLFEGTQPDVTEENLQSRSRGVILMALSNKFGGLLLTTGNKSEY 405 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + PSA Sbjct: 406 AVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISRPPSA 458 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYK 528 ELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ +E+K Sbjct: 459 ELRDNQTDQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRLNEWK 516 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R Q+ G K++ ++FGR+R YPI+N + Sbjct: 517 RHQSAPGPKVSRRAFGRERRYPITNGY 543 >gi|91788178|ref|YP_549130.1| NAD+ synthetase [Polaromonas sp. JS666] gi|91697403|gb|ABE44232.1| NAD+ synthetase [Polaromonas sp. JS666] Length = 562 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 234/574 (40%), Positives = 325/574 (56%), Gaps = 37/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKI +AQLN VGD+ GN K A A G+ L+L EL I GY EDL + SFIQ Sbjct: 3 LKICVAQLNYCVGDMPGNAQKIIDAARTAYAGGVRLLLTPELAICGYAAEDLFLRPSFIQ 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVL------------NSVVILDAGNIIAV 111 AC A++ + + G +VVG P G N+ +L G ++ Sbjct: 63 ACDDAVNLVARELAGLKGLTVVVGTPTGGDNGKGLRTKSVEVQQRHNAARVLREGRVLQT 122 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRD------IRLGILICEDIWKNSNICKHLKK 165 K LPNY F E+R F G VF+ I +G+LICED W + + Sbjct: 123 YAKRELPNYQVFDERRYFTPG--QGVCVFQAGDGADAISVGLLICEDAWFEEP-ARLAQA 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 GAE L +NASP++ K +R ++ ++ LP++Y + VGGQDE++F+G SF Sbjct: 180 AGAEVLAVINASPFHVGKGGEREVMMRSRVLATGLPLVYAHLVGGQDEIVFEGHSFALQA 239 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLR 284 LA + + F E F+TE ++ + +++ P + EAD ++A VL +R Sbjct: 240 DGALAGRAESFKENLFLTE--VERTSTAIKLIANIE------PGRSHEADLWDALVLGVR 291 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F I+GLSGGIDSAL AIAVDALG + V+T+M+P YT+ S DA A+ Sbjct: 292 DYLGKNGFPGAILGLSGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWVDAREMAQ 351 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L +YD + I F + ++ + ENIQ+RIRG LMALSN +++LT Sbjct: 352 RLKVRYDEISIVPEFEAFKASLAHEFKGLKEDTTEENIQARIRGVFLMALSNKFGSIVLT 411 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPS 463 T NKSE++ GY TLYGDM+GGF +KDL KT VF+LA WRN + +G P IP Sbjct: 412 TGNKSEMATGYCTLYGDMAGGFAVIKDLAKTTVFKLARWRNENDPYGTGANP----IPER 467 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYVEHLL 522 ++ + PSAELRP QTDQ+SLPPY +LD I++R +EN++S + V V L+ Sbjct: 468 VITRPPSAELRPDQTDQDSLPPYEVLDAILERYMENDQSVEAIIAAGFERAVVECVARLI 527 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +EYKRRQAPVG ++T +SFG+D YPI++KFR Sbjct: 528 KINEYKRRQAPVGIRVTHRSFGKDWRYPITSKFR 561 >gi|221211577|ref|ZP_03584556.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD1] gi|221168938|gb|EEE01406.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD1] Length = 570 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 230/579 (39%), Positives = 334/579 (57%), Gaps = 38/579 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHEDGAHLMIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV-----------------LNSVVILDA 105 ++A+D L G ++VG P + GV N+ ++ Sbjct: 62 AEAAAALDALADALKPFDGLAVLVGHPLRGAPGVDGNANRPIERGVPPVDTYNAASLIVG 121 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + +P+VF ++ G++ICED W +++ + Sbjct: 122 GRIVGTYRKQDLPNAEVFDEKRYFAT--DAEPLVFELNGVKFGVIICEDAW-HASAAQIA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 179 KAAGAQVLLIPNGSPYHMNKEAVRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 DGQ L QM F E + + E+ Q L + PL + Y A VL + Sbjct: 239 DGQGTLVAQMPQFDEGHAIVEFDGGQPLP----------GAIAPPLPVDAQVYRALVLGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 289 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAADMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRAALAAEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ + ++IP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNATFDYA----RRDIIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISE 561 +EYKRRQAP+G ++T ++FGRD YPI+++F + + E Sbjct: 525 KLNEYKRRQAPIGIRVTHRAFGRDWRYPITSRFAERLGE 563 >gi|218247801|ref|YP_002373172.1| NAD synthetase [Cyanothece sp. PCC 8801] gi|218168279|gb|ACK67016.1| NAD+ synthetase [Cyanothece sp. PCC 8801] Length = 561 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 230/578 (39%), Positives = 330/578 (57%), Gaps = 46/578 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP +GD+ N K A A Q + L+L EL + GYPP DL+ SFI+ Sbjct: 1 MKIAIAQLNPTIGDLVNNAHKILNAANLAASQNVRLLLTPELSLCGYPPRDLLLYPSFIK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 + + + L A ++VG + ++ + NS +L+ G + + K L Sbjct: 61 SLTLELQELAQKLPSQLA-VLVGTVTPNNAAAINGEKPLFNSAALLENGEVKQLFHKCLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPI-VFRD------IRLGILICEDIWKNS----------NIC 160 PNY F E R F SG + +F D I++G+ ICED+W + N Sbjct: 120 PNYDVFDEHRYFESGKQPNYFELFLDDHSSEPIKIGVTICEDLWNDEQFWQKRHYQQNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 K L G + + +L+ASPYY K K R ++ + +P+IYVNQ+GG DELIFDG S Sbjct: 180 KTLANLGVDLIVNLSASPYYLAKPKLRETMLQHTSKYYQIPLIYVNQIGGNDELIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN--YMSDDSASTMYIPLQEEEADYNA 278 F + ++ + K F+E D ++ WN + AS P EEE ++A Sbjct: 240 FVVNEHGEIVLKAKSFAE---------DVKIFTWNKSFKKIVLASVNNFPNTEEEEIWSA 290 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 VL ++DY QK F KVI+GLSGGIDSAL AAIA +A+G NV I++P Y+S SL+D Sbjct: 291 LVLGVKDYAQKCQFSKVILGLSGGIDSALVAAIATEAIGANNVLGILMPSPYSSDHSLKD 350 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A K LG + LPI ++ + +L++ GI EN+Q+RIRGN+LMA++N Sbjct: 351 AEKLVKNLGINHQTLPISGIMKTYDNLLNPLFSGTQFGIAEENLQARIRGNLLMAIANKF 410 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +LL+T NKSEI+VGY TLYGDM+GG + D+ KT+VF L W N H E Sbjct: 411 GYLLLSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTRVFSLCHWLNRH---------QE 461 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRY 517 +IP +IL K PSAEL+P+QTDQ+SLPPY ILD+I++R + + +SF + +N V+ Sbjct: 462 IIPHNILIKPPSAELKPNQTDQDSLPPYEILDEILERRINHHQSFDEICEAGFNANIVQK 521 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V L+ +E+KR+QAP+ K+T K+FG PI+++ Sbjct: 522 VLKLVARAEFKRKQAPLVLKVTDKAFGTGWRMPIASQI 559 >gi|163783722|ref|ZP_02178709.1| NH(3)-dependent NAD+ synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159881047|gb|EDP74564.1| NH(3)-dependent NAD+ synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 567 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 229/581 (39%), Positives = 325/581 (55%), Gaps = 47/581 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARR--AREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 L + +AQ+NPVVGDI GN+ K R AR E LI+F EL +SGY PEDL+ + F Sbjct: 2 LNVTLAQVNPVVGDIEGNVEKIRESVARCEDTSH---LIVFPELVVSGYFPEDLLLRIDF 58 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 ++ C A++ L D + +VVG P + + NS+ +L G ++ V K LPNYS Sbjct: 59 VRKCMEAVEELAKSLKDAKSLVVVGAPFYGGD-LYNSLYLLYGGEVVGVYHKGRLPNYSV 117 Query: 123 FHEKRTFISGYSNDPIV--FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G DP++ I+LG ICEDIW ++ + GAE + ++NASPY+ Sbjct: 118 FDEKRYFREG--EDPLLVELNGIKLGFSICEDIWYPDHLERLSVLSGAEVIVNINASPYH 175 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R V + ++Y N VGG DEL+FDG S D ++ + K F E Sbjct: 176 IGKHEFREGFVRARAEDNICFVLYANLVGGHDELVFDGRSMVVDPLGRVVGRAKSFEEDL 235 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-----------------------YN 277 D+ + ++ I EA Y Sbjct: 236 LTLSIDVDKVRRRRLLDLRWRNASREIDPFPVEASIELPDKPYVEPRLEESPSEEEEVYR 295 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A VL DYV KN F KV+IGLSGG+DS+L A IA DALG + V + +P +++S +S E Sbjct: 296 AVVLGTHDYVVKNGFSKVVIGLSGGMDSSLTACIATDALGADKVLGVFMPSRFSSKESFE 355 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 DA A LG ++ +PI ++ + + L E ENIQ+RIR NIL +SN Sbjct: 356 DAKTLADNLGIEFHTVPIDEVYVAYHDELLPVLGEIEFDTADENIQARIRANILFYISNK 415 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 ++L+TSNKSE + GY T+YGDMSGGF PLKDLYKT +++LA +RNS L+ Sbjct: 416 LGHLVLSTSNKSESATGYTTIYGDMSGGFAPLKDLYKTTIYKLARYRNS---------LS 466 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDET 514 VIP + +K PSAELRP+QTDQ++LPPY +LD+I+K +E+ E + + Y+ T Sbjct: 467 PVIPERVFQKPPSAELRPNQTDQDTLPPYEVLDEILKMYLEDNVSPEDIVK--KGYDRGT 524 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V V ++ +EYKR+QAPVG K+T+++FG+D PI+N++ Sbjct: 525 VFKVVKMVRRAEYKRKQAPVGVKVTSRAFGKDWRMPITNRY 565 >gi|167569235|ref|ZP_02362109.1| NAD synthetase [Burkholderia oklahomensis C6786] Length = 566 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 233/581 (40%), Positives = 335/581 (57%), Gaps = 42/581 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K +IA+AQLN VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAARAAHDAGAQLLIAPELALSGYPPEDLLLRPAFY 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP----------------RQDQEGV-----LNSVV 101 + ++ + G ++VG P R + GV N+ Sbjct: 62 AASDAALAELAALLKPLAGLAVLVGHPQRAAGSGASSADGNANRPIERGVSPTDTYNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + P VF ++ G++ICED+W +++ Sbjct: 122 LIVDGEVVGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVKFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP+IYVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMIYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E N + E+ + L + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGNAVVEFDGARPLP----------ARIAPELSVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL + DY+ KN F IIGLSGG+DSAL A+AVDALG + V+ +M+P +YT+ S DA Sbjct: 289 VLGVHDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGADRVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 AA AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 AAMAKRVGVRYDEIAIAPMFDAFRTSLAGEFAGRAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGKL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI++ F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSCFTESI 565 >gi|108805552|ref|YP_645489.1| NH(3)-dependent NAD(+) synthetase [Rubrobacter xylanophilus DSM 9941] gi|108766795|gb|ABG05677.1| NH(3)-dependent NAD(+) synthetase [Rubrobacter xylanophilus DSM 9941] Length = 577 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/579 (38%), Positives = 327/579 (56%), Gaps = 38/579 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+N VGDI GN + E A R G +L+ F EL ++GYPPEDL+ + F+ Sbjct: 1 MRVALAQINTTVGDIWGNAERVSGTLERALRGGAELVAFPELALTGYPPEDLLLRPGFVH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++ + + +G A VGF + + N+ ++ G ++ K LPNY F Sbjct: 61 DNLAALEEVAARVPEG-AVAAVGFVDLGTD-LFNACAVISGGRVLHRYHKRYLPNYGVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G + +G+ +CEDIW + GA L +++ASPY+ K Sbjct: 119 ENRYFREGGGAPVLRLDGTLVGVSVCEDIWYPGGPAREQALAGASVLLNISASPYHRRKG 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R +++ + S +++ N VGGQDEL+FDG S FD + +L + + F E + Sbjct: 179 ALRERMLSVRASDYGCYVLFCNLVGGQDELVFDGHSVVFDPEGRLLARARQFEEDLLFVD 238 Query: 245 WHYDQQLSQWNYMS-------DDSASTMYIP-------------------LQEEEADYNA 278 + ++ L Q + S + + +P L EE A Sbjct: 239 LYPEEALVQRLHESRPRKEELETEPEVVEVPGFRERREPAQSREPRAEELLPEEGEVLEA 298 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 VL LRDY +KN F + ++GLSGGIDS+L AA+A ALG ENV +++P +YTS S D Sbjct: 299 LVLGLRDYFRKNGFSRAVLGLSGGIDSSLTAAVAARALGPENVTGVLMPSRYTSEASNAD 358 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A A AK LG V+PI + + ++++ + P + ENIQ+RIRGNI+MALSN Sbjct: 359 ARAVAKNLGIDVRVIPIGRAFDAYREMLAEVFRGLPEDVTEENIQARIRGNIVMALSNKF 418 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN-SHGITSGLGPLT 457 + L+T NKSE+SVGY TLYGDM+GGF+ LKD+ KT V+++A + N + G Sbjct: 419 GWIALSTGNKSEMSVGYSTLYGDMAGGFSVLKDVPKTLVYRVARYVNEAEG--------R 470 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVR 516 EVIP S+L K PSAELRP Q D +SLPPY +LD I++ VE+++ + +E VR Sbjct: 471 EVIPESVLTKEPSAELRPGQRDVDSLPPYEVLDPILEAYVEDDKGVGEIVAMGFEEEDVR 530 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V ++ +EYKRRQAPVG K+T ++FGRDR PI+N++ Sbjct: 531 RVVRMVDRAEYKRRQAPVGIKVTTRAFGRDRRMPITNRY 569 >gi|56460294|ref|YP_155575.1| NAD synthetase [Idiomarina loihiensis L2TR] gi|56179304|gb|AAV82026.1| NAD synthase [Idiomarina loihiensis L2TR] Length = 543 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/566 (38%), Positives = 324/566 (57%), Gaps = 30/566 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL + +AQL+ VG I N A + E Q D+I+F EL I+GYPPEDL+F+ Sbjct: 1 MAKLSLCLAQLDFTVGAIHNNTALILKTLREQGEQ-HDIIVFPELAITGYPPEDLLFRDD 59 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 QA +A++ + + D ++VG P+ + N++ +L G + K LPNY Sbjct: 60 LHQAVDNAVEQISAAASD--CVVIVGHPQAVGGELFNAMSVLHRGECLHRYFKQRLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E+R FI G+ + ++ +R+G+ ICED+W + + L L S+NASPY Sbjct: 118 VFDEQRYFIPGHQSQVFEWQGVRIGLQICEDLWHPQPLQQLLDDDIDLVL-SINASPYEL 176 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 NK ++R ++ +++ PI+Y+N G QDEL+FDG S D + +L ++ H Sbjct: 177 NKHEQRLGVLKQRVAEAGKPILYLNNCGAQDELVFDGHSLVLDAEGELVAELPHCEMTTA 236 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD----YNACVLSLRDYVQKNNFHKVII 297 + D + + E+ D Y+A VL++RDYV KN F V++ Sbjct: 237 SVTY------------EDKGIRCVGFEPKAEQNDLAHVYDALVLAVRDYVTKNGFSGVVL 284 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIA DALG + V +M+P++YTS SLEDA A LG +YDV+PI Sbjct: 285 GLSGGIDSALTLAIASDALGADKVHAVMMPFRYTSDMSLEDAEKQADTLGVRYDVVPIEP 344 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + N F + + E + EN+QSR RG +LMALSN + +++L T NKSE++VGY T Sbjct: 345 MFNEFMTQLGPLFGETETDTTEENLQSRCRGVLLMALSNKTGSLVLATGNKSEMAVGYAT 404 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM GGF P+KD+ K V+QLA +RN+ G IP ++++ PSAEL P Q Sbjct: 405 LYGDMCGGFAPIKDIPKLLVYQLAEFRNTRG---------ACIPQRVIDRPPSAELAPDQ 455 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 D +SLP Y LD I+ VE + S + + +E VR V L+ +EYKRRQ+ VG Sbjct: 456 VDSDSLPDYSDLDRILALYVERDWSVTDIIAAGFVEEDVRRVVRLVDLNEYKRRQSAVGP 515 Query: 537 KITAKSFGRDRLYPISNKFRDHISEE 562 K+T ++FG+DR YPI++ +R + + Sbjct: 516 KVTPRNFGKDRRYPITSHYRHELQRQ 541 >gi|33596092|ref|NP_883735.1| NAD synthetase [Bordetella parapertussis 12822] gi|33573095|emb|CAE36737.1| putative NAD synthetase [Bordetella parapertussis] Length = 544 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 227/556 (40%), Positives = 325/556 (58%), Gaps = 18/556 (3%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++ IAQ+N VGD+AGN A+ +A +A QG D+++ EL ++GYPPEDL+ + FIQ Sbjct: 5 RVGIAQINACVGDLAGNAARVLQAARQAAGQGADVLVTPELVLTGYPPEDLLLRPRFIQE 64 Query: 66 CSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L D G +V+G Q+ + N+ ++ G ++ K LPNYS F Sbjct: 65 QQAVFERLCQDLAGLAGLHVVIGHVLARQDRLYNAATVVCEGRVLGSYCKRELPNYSVFD 124 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F + + +R G+ ICEDIW L S NASPY K Sbjct: 125 EQRYFSAHGEAFGFTVKGVRFGLNICEDIWLERAPRAAAADGAQVLLVS-NASPYNTGKQ 183 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R + + +IY N VGGQDEL+FDGASF D Q +++ ++ F+E + E Sbjct: 184 EERLSVARRSVQDTGCALIYANLVGGQDELVFDGASFALDAQGRMSARLPDFTEGVNVLE 243 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + + P EE +NA VL +RDY+ KN F IIGLSGGID Sbjct: 244 ------VDARGTVRPVTEQAAVQPYGLEEQVWNALVLGVRDYLGKNGFPGAIIGLSGGID 297 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+ A+AVDA+G +NV+ +M+P +YT+ SL DAA A+ LG +YDV+ I ++V+ F + Sbjct: 298 SAVVLAVAVDAVGADNVRAVMMPSRYTADISLTDAADMARRLGVQYDVIAIGEVVDRFEA 357 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ P ENIQ+R RG +LMALSN + ++LTT NKSE++ GY TLYGDM+G Sbjct: 358 ALAPQFAGLPVDATEENIQARARGTLLMALSNKTGRLVLTTGNKSEMTTGYCTLYGDMAG 417 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF +KD+ KT V++LA+WRN +IP I+ + PSAELRP QTDQ+SLP Sbjct: 418 GFAVIKDVPKTLVYRLANWRNQR---------QPIIPERIITRPPSAELRPDQTDQDSLP 468 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY ILD II+R +E+ S + + E V V L+ +EYKRRQAP G +IT ++F Sbjct: 469 PYDILDGIIERYMEHNASAADIVAAGFPREAVGQVVRLIRINEYKRRQAPPGPRITPRAF 528 Query: 544 GRDRLYPISNKFRDHI 559 GRD YP++N FR+ + Sbjct: 529 GRDWRYPVTNGFRETV 544 >gi|167580208|ref|ZP_02373082.1| NAD synthetase [Burkholderia thailandensis TXDOH] Length = 561 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 236/579 (40%), Positives = 342/579 (59%), Gaps = 43/579 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP-----------RQDQEGV-----LNSVVILDAG 106 A +A+ L + G ++VG P R + GV N+ ++ G Sbjct: 62 AASDAALAELAAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIVGG 121 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLK 164 + K +LPN F EKR F + + P VF ++ G++ICED+W +++ + K Sbjct: 122 EVAGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVKFGVVICEDVW-HASAAQLAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF D Sbjct: 179 AAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 G +L +M F E N + E+ + L + + +Y A VL +R Sbjct: 239 GAGELVAKMPQFEEGNAIVEFDGARALPAAIAPALSVEAQVY----------RALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F IIGLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LMALSN ++ Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLLMALSNKFGSI 405 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ ++IP Sbjct: 406 VLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYG----QPDIIP 461 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V Sbjct: 462 ERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRVTR 521 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 522 LIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFVESI 560 >gi|75906642|ref|YP_320938.1| NAD synthetase [Anabaena variabilis ATCC 29413] gi|75700367|gb|ABA20043.1| NH(3)-dependent NAD(+) synthetase [Anabaena variabilis ATCC 29413] Length = 566 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/573 (38%), Positives = 322/573 (56%), Gaps = 42/573 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP++GD+ GN K ++A ++G L+L EL + GYPP DL+ F++ Sbjct: 1 MKIAIAQINPIIGDLTGNAQKILEMAQQAIKKGARLLLTPELSLCGYPPRDLLLNPIFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINL 117 A S + L D A ++VG + + + NS +L+ G + + K L Sbjct: 61 AMSVTLQQLARDLPVNLA-VLVGTVELNCQAHTTGGKPLFNSTALLENGKVKQMFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQG 167 P Y F E R F +G + +I +G+ ICED+W + +N L G Sbjct: 120 PTYDVFDEHRYFEAGQQANYFALDNINIGVTICEDLWNDEEFWGKRSYTANPISDLAILG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K R ++ P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDLIVNLSASPYSLGKQSFREAMLRHSAVRFQQPVIYANQVGGNDDLIFDGRSFALNRQG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + K F+ ++ Q+ Q +S I E+E + A VL +RDY Sbjct: 240 EVMCRAKGFASDLITVDFDESQRDLQL-------SSVAPIYESEDEEIWQALVLGVRDYA 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 QK F +V++GLSGGIDSAL A IA +ALGKENV +++P Y+S S+ DA A A LG Sbjct: 293 QKCRFSQVVLGLSGGIDSALVATIATEALGKENVFGVLMPSPYSSEHSISDALALADNLG 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K +LPI DL+ F + + G+ ENIQSRIRGN+LMA++N +LL+T N Sbjct: 353 IKTQILPIGDLMQSFDHSLVELFAGTEFGLAEENIQSRIRGNLLMAIANKFGYLLLSTGN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V+ L W NSH + VIP +IL K Sbjct: 413 KSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCKWLNSHQ--------SPVIPENILTK 464 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF-----INNDQEYNDETVRYVEHLL 522 +PSAEL+P Q DQ+SLPPY ILDDI++R++ N +S +D D+ ++ V Sbjct: 465 APSAELKPGQVDQDSLPPYEILDDILQRLIHNHQSVGEIVAAGHDPMVVDKVIQMVAR-- 522 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +E+KRRQAP G KIT ++FG PI++ + Sbjct: 523 --AEFKRRQAPPGLKITDRAFGTGWRMPIASNW 553 >gi|284991820|ref|YP_003410374.1| NAD+ synthetase [Geodermatophilus obscurus DSM 43160] gi|284065065|gb|ADB76003.1| NAD+ synthetase [Geodermatophilus obscurus DSM 43160] Length = 611 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/606 (36%), Positives = 326/606 (53%), Gaps = 61/606 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L++A+AQ++ VGDIAGN A A G +++F E+ ++GYPPEDLV ++SF Sbjct: 6 QLRVALAQVDTRVGDIAGNAALVTTWTAIAAEDGAHVVVFPEMTLTGYPPEDLVLRESFA 65 Query: 64 QACSSAIDTLKSDTHDGGAG---IVVGF--------------------------PRQDQE 94 QA A+ L D + G G +VVG+ PR+ Sbjct: 66 QASEKALVELAGDLAERGLGDTAVVVGYLAHTEGIGPATTESMPGDDDRPADANPRRGAP 125 Query: 95 GVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 N+ +L G ++ K +LPNY F E R F+ G + + + + +CED+W Sbjct: 126 --RNAAALLHGGEVVVRYHKRHLPNYGVFDEARYFVPGTELPVVRLHGVDVALTVCEDLW 183 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL 214 C + G + + S NASPY K R +V + + ++Y NQVGGQDEL Sbjct: 184 VEGGPCGVAGEAGVDLVLSPNASPYERAKDDLRLPLVRRRAAEARATVVYCNQVGGQDEL 243 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQL------SQWNYMS---------- 258 +FDG S +L + F E + D+ ++ M+ Sbjct: 244 VFDGDSMAVAPDGELLGRAPQFVEHLLCVDLRVDRSAVPDRREGRFGPMTVTRHVLSEEP 303 Query: 259 ----DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 D +++ PL + E + A VL LRD++ KN V++GLSGGIDSA+CAA+AVD Sbjct: 304 VPAFDPRPASVAEPLSDCEEVWRALVLGLRDFIDKNGMPSVVLGLSGGIDSAVCAALAVD 363 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 ALG + V + LP +Y+S SL DA A+ G Y V+PI +V+ + S + E Sbjct: 364 ALGADRVYGVGLPSRYSSEHSLADAEDLARRTGLHYSVVPIAPMVDAYHSSV------EL 417 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 SG+ AEN+Q+R+RG +LM LSN +LLTT NKSEI+VGY TLYGD +GGF P+KD+ K Sbjct: 418 SGVAAENLQARVRGTLLMGLSNQHGHLLLTTGNKSEIAVGYSTLYGDSAGGFAPIKDVPK 477 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIK 494 T V+ LA WRN + G TE IP + +EK PSAEL P Q D +SLP Y LD ++ Sbjct: 478 TLVWALARWRNEYARGRG---ETEPIPVNSIEKPPSAELAPGQVDTDSLPSYEELDAVVA 534 Query: 495 RIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 V+ + ++ ++ E V V L+ +E+KRRQ+ GTKI+ K+FGRDR P++N Sbjct: 535 DYVDRDLGMGELLERGHDPEVVARVLRLVDAAEFKRRQSAPGTKISLKAFGRDRRLPVTN 594 Query: 554 KFRDHI 559 ++R+ + Sbjct: 595 RWRETL 600 >gi|33593664|ref|NP_881308.1| NAD synthetase [Bordetella pertussis Tohama I] gi|33563737|emb|CAE42977.1| putative NAD synthetase [Bordetella pertussis Tohama I] gi|332383068|gb|AEE67915.1| NAD synthetase [Bordetella pertussis CS] Length = 544 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 231/565 (40%), Positives = 330/565 (58%), Gaps = 36/565 (6%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++ IAQ+N VGD+AGN A+ +A +A QG D+++ EL ++GYPPEDL+ + FIQ Sbjct: 5 RVGIAQINACVGDLAGNAARVLQAARQAAGQGADVLVTPELVLTGYPPEDLLLRPRFIQE 64 Query: 66 CSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L D G +V+G Q+ + N+ ++ G ++ K LPNYS F Sbjct: 65 QQAVFERLCQDLAGLAGLHVVIGHVLARQDRLYNAATVVCEGRVLGSYCKRELPNYSVFD 124 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F + + +R G+ ICEDIW A+ L NASPY K Sbjct: 125 EQRYFSAHGEAFGFTVKGVRFGLNICEDIWFERAPRAAAADG-AQVLLVPNASPYNTGKQ 183 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R + + +IY N VGGQDEL+FDGASF D Q +++ ++ F+E Sbjct: 184 EERLSVARRSVQDTGCALIYANLVGGQDELVFDGASFALDAQGRMSARLPDFTEG----- 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQE---------EEADYNACVLSLRDYVQKNNFHKV 295 N + D+ ST+ P+ E EE +NA VL +RDY+ KN F Sbjct: 239 ---------VNVLEVDARSTVR-PVTEQAAVQPYGLEEQVWNALVLGVRDYLGKNGFPGA 288 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 IIGLSGGIDSA+ A+AVDA+G +NV+ +M+P +YT+ SL DAA A+ LG +YDV+ I Sbjct: 289 IIGLSGGIDSAVVLAVAVDAVGADNVRAVMMPSRYTADISLTDAADMARRLGVQYDVIAI 348 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 ++V+ F + ++ P ENIQ+R RG +LMALSN + ++LTT NKSE++ GY Sbjct: 349 GEVVDRFEAALAPQFAGLPVDATEENIQARARGTLLMALSNKTGRLVLTTGNKSEMTTGY 408 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGDM+GGF +KD+ KT V++LA+WRN +IP I+ + PSAELRP Sbjct: 409 CTLYGDMAGGFAVIKDVPKTLVYRLANWRNQR---------QPIIPERIITRPPSAELRP 459 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 QTDQ+SLPPY ILD II+R +E+ S + + E V V L+ +EYKRRQAP Sbjct: 460 DQTDQDSLPPYDILDGIIERYMEHNASAADIVAAGFPREAVGQVVRLIRINEYKRRQAPP 519 Query: 535 GTKITAKSFGRDRLYPISNKFRDHI 559 G +IT ++FGRD YP++N FR+ + Sbjct: 520 GPRITPRAFGRDWRYPVTNGFRETV 544 >gi|33601488|ref|NP_889048.1| NAD synthetase [Bordetella bronchiseptica RB50] gi|33575924|emb|CAE33003.1| putative NAD synthetase [Bordetella bronchiseptica RB50] Length = 544 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 227/556 (40%), Positives = 326/556 (58%), Gaps = 18/556 (3%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++ IAQ+N VGD+AGN A+ +A +A QG D+++ EL ++GYPPEDL+ + FIQ Sbjct: 5 RVGIAQINACVGDLAGNAARVLQAARQAAGQGADVLVTPELVLTGYPPEDLLLRPRFIQE 64 Query: 66 CSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L D G +V+G Q+ + N+ ++ G ++ K LPNYS F Sbjct: 65 QQAVFERLCQDLAGLAGLHVVIGHVLARQDRLYNAATVVCEGRVLGSYCKRELPNYSVFD 124 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F + + +R G+ ICEDIW A+ L NASPY K Sbjct: 125 EQRYFSAHGEAFGFTVKGVRFGLNICEDIWFERAPRAAAADG-AQVLLVPNASPYNTGKQ 183 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R + + +IY N VGGQDEL+FDGASF D Q +++ ++ F+E + E Sbjct: 184 EERLSVARRSVQDTGCALIYANLVGGQDELVFDGASFALDAQGRMSARLPDFTEGVNVLE 243 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + + P EE +NA VL +RDY+ KN F IIGLSGGID Sbjct: 244 ------VDARGTVRPVTEQAAVQPYGLEEQVWNALVLGVRDYLGKNGFPGAIIGLSGGID 297 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+ A+AVDA+G +NV+ +M+P +YT+ SL DAA A+ LG +YDV+ I ++V+ F + Sbjct: 298 SAVVLAVAVDAVGADNVRAVMMPSRYTADISLTDAADMARRLGVQYDVIAIGEVVDRFEA 357 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ P ENIQ+R RG +LMALSN + ++LTT NKSE++ GY TLYGDM+G Sbjct: 358 ALAPQFAGLPVDATEENIQARARGTLLMALSNKTGRLVLTTGNKSEMTTGYCTLYGDMAG 417 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF +KD+ KT V++LA+WRN +IP I+ + PSAELRP QTDQ+SLP Sbjct: 418 GFAVIKDVPKTLVYRLANWRNRR---------QPIIPERIITRPPSAELRPDQTDQDSLP 468 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY ILD II+R +E+ S + + E V V L+ +EYKRRQAP G +IT ++F Sbjct: 469 PYDILDGIIERYMEHNASAADIVAAGFPREAVGQVVRLIRINEYKRRQAPPGPRITPRAF 528 Query: 544 GRDRLYPISNKFRDHI 559 GRD YP++N FR+ + Sbjct: 529 GRDWRYPVTNGFRETV 544 >gi|303257762|ref|ZP_07343774.1| NAD+ synthetase [Burkholderiales bacterium 1_1_47] gi|331001199|ref|ZP_08324826.1| NAD+ synthase [Parasutterella excrementihominis YIT 11859] gi|302859732|gb|EFL82811.1| NAD+ synthetase [Burkholderiales bacterium 1_1_47] gi|329569131|gb|EGG50923.1| NAD+ synthase [Parasutterella excrementihominis YIT 11859] Length = 540 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 221/564 (39%), Positives = 322/564 (57%), Gaps = 33/564 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M++K+ +++AQLN GD+ GN + A E+A D+++ EL + GYPPEDL+F Sbjct: 1 MIEKVVVSMAQLNQTAGDLEGNFKRIAEAAEKAKHS--DILVTPELSLCGYPPEDLLFLD 58 Query: 61 SFIQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 SF++ C+ ++ L + T I+ G+P ++ + N V ++ G I+ K NLPN Sbjct: 59 SFLEDCAKKLNELVEYSTRFPKLHILAGYPLKEAGRLYNVVSVILNGKILLTYRKKNLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y F E+R F G D F D R G+ ICEDIW K+QGA+ L NAS Sbjct: 119 YGVFDEERYFTPG-GEDVCTFDVGDTRFGVNICEDIW-FPEAPSQAKEQGAQVLLIANAS 176 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 P+ K ++R +V ++ + + YVN G QDE++FDG +F + LA + H Sbjct: 177 PFEEGKEEQRLNMVRRHVNAIGMDACYVNMCGAQDEIVFDGETFACSADEVLA-RAPHMK 235 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E E + +DS PL + Y A V+S+RDY+ KN F V++ Sbjct: 236 ESLLSVEVRKGRICR-----GEDSQ-----PLSDWAVLYEALVVSMRDYINKNGFKGVVL 285 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DSAL IAVDA+G + V +M+P YTS S DAA A LG + + + I D Sbjct: 286 GLSGGVDSALVLKIAVDAVGNDKVLAVMMPSVYTSSLSRGDAAKLASRLGVRLETISIQD 345 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F ++++ P + EN+Q+RIRG ILMA+SN +M+ TT NKSE++VGY T Sbjct: 346 GYTAFEFMLAKQFNGMPHDVTEENLQARIRGVILMAISNKFGSMVATTGNKSEMAVGYST 405 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGD++GGF +KD+YKTQV+ L W N S P V P +IL ++PSAELR +Q Sbjct: 406 LYGDLAGGFAVIKDVYKTQVYALCRWINE---CSKENP---VFPETILTRAPSAELRENQ 459 Query: 478 TDQESLPPYPILDDIIKRIVENEES-----FINNDQEYNDETVRYVEHLLYGSEYKRRQA 532 DQ+SLP Y +LD+I++R +E+ E D+ D+ +R V +EYKRRQ+ Sbjct: 460 KDQDSLPDYSVLDEILRRFIEDREGPEEIVAAGFDRAVVDKVLRMVSR----AEYKRRQS 515 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 P+G K+T +FGRD +P++NK+R Sbjct: 516 PIGPKVTKVAFGRDWRFPVTNKYR 539 >gi|78048901|ref|YP_365076.1| NAD synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037331|emb|CAJ25076.1| NAD(+) synthase (glutamine-hydrolyzing) [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 547 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 227/568 (39%), Positives = 318/568 (55%), Gaps = 44/568 (7%) Query: 5 LKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 L+IA+AQ + VG + N IA AR E D++LF EL ISGYPPEDL+ Sbjct: 6 LRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPPEDLL 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + T G VVG+P+ V N+ +L G I A K L Sbjct: 60 LRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKREL 117 Query: 118 PNYSEFHEKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 PNY+ F E+R F DP + + +++G++ICED+W + ++ GAE + Sbjct: 118 PNYAVFDERRYF----DVDPDGESCVVTVKGVQVGVVICEDLWFAEPLANTVRA-GAELV 172 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 173 LVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHP 232 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F +Q + ++ ++ DD +M + + A V L+DY +KN Sbjct: 233 AAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYCRKNG 286 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + Sbjct: 287 FSKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTATLSNDLADEQCRALGVKLE 346 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + I EN+QSR RG ILMALSN ++LTT NKSE Sbjct: 347 TIAIEPAFEGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEY 406 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + PSA Sbjct: 407 AVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISRPPSA 459 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYK 528 ELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ +E+K Sbjct: 460 ELRANQTDQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRLNEWK 517 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 R Q+ G K++ ++FGR+R YPI+N +R Sbjct: 518 RHQSAPGPKVSRRAFGRERRYPITNGYR 545 >gi|17229977|ref|NP_486525.1| NAD synthetase [Nostoc sp. PCC 7120] gi|17131577|dbj|BAB74184.1| NH(3)-dependent NAD(+) synthetase [Nostoc sp. PCC 7120] Length = 566 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/569 (39%), Positives = 323/569 (56%), Gaps = 34/569 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP++GD+ GN K ++A ++G L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQINPIIGDLTGNAQKILEIAQQAIKKGARLLLTPELSLCGYPPRDLLLNPSFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINL 117 A S + L D A ++VG + + + NS +L+ G + + K L Sbjct: 61 AMSVTLQQLARDLPVNLA-VLVGTVEPNHQAHTTGGKPLFNSTALLENGKVKQMFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQG 167 P Y F E R F +G + +I +G+ ICED+W + +N L G Sbjct: 120 PTYDVFDEHRYFEAGQQANYFALDNINIGVTICEDLWNDEEFWGKRSYTANPISDLAILG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K R ++ P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDLIVNLSASPYSLGKQSFREAMLRHSALRFQQPVIYTNQVGGNDDLIFDGRSFALNRQG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + K F+ ++ Q+ Q N S + +Y E+E ++A VL +RDY Sbjct: 240 EVMCRAKGFASDLITVDFDESQRDLQLN-----SVAPVY--ESEDEEIWHALVLGVRDYA 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 QK F +V++GLSGGIDSAL A IA ALGKENV +++P Y+S S+ DA A A LG Sbjct: 293 QKCRFSQVVLGLSGGIDSALVATIATAALGKENVFGVLMPSPYSSEHSISDALALADNLG 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K +LPI +L+ F + + G+ ENIQSRIRGN+LMA++N +LL+T N Sbjct: 353 IKTQILPIGELMQSFDQSLVELFAGTEFGLAEENIQSRIRGNLLMAIANKFGYLLLSTGN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V+ L +W NSH + +IP +IL K Sbjct: 413 KSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCNWLNSHQ--------SPIIPENILTK 464 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSE 526 +PSAEL+P Q DQ+SLPPY ILDDI++R + N +S + V V ++ +E Sbjct: 465 APSAELKPGQVDQDSLPPYEILDDILQRFIHNHQSVGEIVAAGHEPVVVDRVIQMVARAE 524 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G KIT ++FG PI++ + Sbjct: 525 FKRRQAPPGLKITDRAFGTGWRMPIASNW 553 >gi|221067906|ref|ZP_03544011.1| NAD+ synthetase [Comamonas testosteroni KF-1] gi|220712929|gb|EED68297.1| NAD+ synthetase [Comamonas testosteroni KF-1] Length = 535 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 221/550 (40%), Positives = 324/550 (58%), Gaps = 25/550 (4%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLK- 74 +GD++GN+ K A E+A G L+L EL + GY EDL + +F+ AC A+ L+ Sbjct: 1 MGDLSGNVQKIIAAAEQAYANGARLLLTPELALCGYAAEDLYLRPAFLDACDEALKQLQQ 60 Query: 75 SDTHDGGAGIVVGFPRQD-QEGVL-NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG 132 + + G +V+G P++D Q G L N+ +L G ++A K LPN+ F E+R F +G Sbjct: 61 ASSQWPGLALVIGHPQRDAQTGTLFNAASVLRDGQLVARYYKQLLPNFGVFDEQRYFAAG 120 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVT 192 + IR+G+LICED W ++ + GA+ L +NASP++ K +R ++ Sbjct: 121 EQSCVFELDGIRIGLLICEDAW-HAGPARAAVAAGAQLLLVINASPFHSGKPLEREAVIA 179 Query: 193 GQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLS 252 + +P++Y + VGGQDE++FDG SF Q+A + F E M H Sbjct: 180 QRAVENAVPLVYAHLVGGQDEVVFDGCSFAVQADGQVAARAAAFEEDLPMMAAH------ 233 Query: 253 QWNYMSDDSASTMYIPLQ----EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 D T+ ++ +A ++A VLS+RDYV KN F +IGLSGG+DSAL Sbjct: 234 -----PGDGGVTLMGEVRPLPGHHQALWSALVLSVRDYVGKNRFPGALIGLSGGMDSALV 288 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 AIAVDALG + V+T+M+P YT+ S DA ++ +G +++ + I F + ++ Sbjct: 289 LAIAVDALGADKVRTVMMPSPYTADISWLDAREMSERVGVQHEEIDIAPQFEAFKAALAG 348 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 EN+Q+RIRG +LMA+SN +++LTT NKSE+S GY TLYGDM+GGF Sbjct: 349 TFAGRAEDTTEENLQARIRGTLLMAMSNKFGSIVLTTGNKSEMSTGYCTLYGDMAGGFAV 408 Query: 429 LKDLYKTQVFQLASWRNSHGI-TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYP 487 +KD++KT+VF LA WRN++ + +GL P IP I+ + PSAELRP Q DQ+SLP Y Sbjct: 409 IKDVFKTEVFALARWRNANDLFGTGLDP----IPERIITRPPSAELRPDQKDQDSLPDYE 464 Query: 488 ILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRD 546 +LD I+ R +EN ES + E + V V L+ +EYKRRQAPVG ++T +SFG+D Sbjct: 465 VLDAIVSRYMENNESISSIVAEGFAPADVERVTRLIQINEYKRRQAPVGPRLTMRSFGKD 524 Query: 547 RLYPISNKFR 556 YPI+NKFR Sbjct: 525 WRYPITNKFR 534 >gi|160872210|ref|ZP_02062342.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Rickettsiella grylli] gi|159121009|gb|EDP46347.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Rickettsiella grylli] Length = 543 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/563 (38%), Positives = 326/563 (57%), Gaps = 33/563 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA+AQ N +VGDI GN ++A +DL++F EL ++GYPPEDL+ ++ F Q Sbjct: 6 IAVAQSNFLVGDIQGNTQIILDNIQKAKHASVDLLIFPELALTGYPPEDLLLREDFKQQI 65 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 A+ ++ + G +++G+P +G N+V L+ I+ K LPNY F E Sbjct: 66 QQALKIIQEKSI--GVTLLLGYPDFSSQGTFNAVSQLENKKIVNTYHKQYLPNYGVFDEC 123 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 R F SG + + + +GILICED+W + H K+ GA+ L +NASP+ + K + Sbjct: 124 RYFKSGTQHGLFNIKGLPVGILICEDLWHSQPALTH-KENGAKLLVVINASPFDYTKAHQ 182 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWH 246 R +I T + HLP++YV VGGQD L+FDG SF + + + F E W Sbjct: 183 RLKIATARTKETHLPVLYVQGVGGQDNLVFDGGSFALNAKGHCVAETDFFKED----LWL 238 Query: 247 YDQQLSQWNYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLS 300 D + +S ++P + +EA YNA L++ DYV KN+F V+IGLS Sbjct: 239 VDLTIH---------SSVHFVPQKRLTKPPIDEAIYNALTLAVADYVNKNHFPGVLIGLS 289 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG + V + LP +YTS S E L + L I + Sbjct: 290 GGIDSALVLAIAVDALGSDRVHAVFLPSRYTSQLSQEIVKELGSNLQVSIETLSIEPSFS 349 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + P GI+AENIQ+R R +LMALSNH +LL +NKSE++VGYGTLYG Sbjct: 350 AFLTTLNLDPKHPPKGIIAENIQARCRAVLLMALSNHHGNLLLNCTNKSELAVGYGTLYG 409 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT+V+QLA +RN ++ P S++ ++PSAEL +Q D+ Sbjct: 410 DMAGGFSVLKDVTKTRVYQLAIYRNR----------CKIFPNSLMTRAPSAELFENQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 + LP Y LD I++ +E+++S + Q + E V+ + HL+ +EYKR+Q+ G +IT Sbjct: 460 DLLPSYAQLDPILELYIEHDKSINDIVQAGFPREIVQKIIHLVNKNEYKRQQSAPGPRIT 519 Query: 540 AKSFGRDRLYPISNKFRDHISEE 562 ++FG++R YPI++ F + ++ Sbjct: 520 PRAFGQERRYPITSAFSKQLKKK 542 >gi|296139215|ref|YP_003646458.1| NAD+ synthetase [Tsukamurella paurometabola DSM 20162] gi|296027349|gb|ADG78119.1| NAD+ synthetase [Tsukamurella paurometabola DSM 20162] Length = 582 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/592 (38%), Positives = 323/592 (54%), Gaps = 48/592 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A Q+NPVVGD+ N+++ A +A +G + +F E+ ++GYP EDL+ ++S Sbjct: 1 MTPLRVAACQINPVVGDLDANVSRITAAARDAAERGAQVAVFGEMALTGYPVEDLLLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE----------GVLNSVVILDAGNI 108 F A+ L G G +VVGF +D + G N+ +L G + Sbjct: 61 FAVDSREAVHDLAHSLDAAGCGDLIVVVGFLDRDPDAPETSTNPTGGARNAAGVLHRGEL 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKK 165 +A DK LPNY F EKR F G D +V D+ RLG+ ICED+W L + Sbjct: 121 VARYDKHFLPNYGVFDEKRWFTPG---DRLVVLDVDGVRLGLAICEDVWWPDGPVAGLGE 177 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF-- 223 G + + LNASP+ K ++R E+V +++ P+IYVN VGGQDEL+FDG SF F Sbjct: 178 LGVDAVLCLNASPFEVGKPEQRREVVAQRVAEGGAPVIYVNLVGGQDELVFDGDSFVFGP 237 Query: 224 DGQQQLAFQMKHFSEQNFMTEW--HYDQQLSQWNYMSDDSAS----------TMYIPLQE 271 +G Q F++ ++ + + W S A+ T + L E Sbjct: 238 EGAPATGPQFVEFTQLVDVSPRGREHATTVEGWQVESLALAARPTPLAPQVVTDWPELDE 297 Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 + A V RDYV K V +G+SGGIDSAL A IA DA+G +NV + +P KY+ Sbjct: 298 YAQIWAALVTGTRDYVHKVGGSTVALGMSGGIDSALVAVIAADAVGADNVYGVGMPSKYS 357 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 S S +DAA A+ +G + PI +V F Q +G+ ENIQ+R RG L Sbjct: 358 SDHSKDDAADQAQRMGIHFRFEPIEHMVESFVG------QLHLTGLAEENIQARCRGMTL 411 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 M+LSN ++L T NKSE++VGY T+YGD G + P++D+ K+ V+ LA WRN + Sbjct: 412 MSLSNLDGHLVLATGNKSELAVGYSTIYGDAVGAYAPIRDVEKSLVWDLARWRNKLAVER 471 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFI------N 505 G P IP + + K PSAELRP Q D +SLP Y ILDDI++R VE ++ N Sbjct: 472 GETP---PIPENSITKEPSAELRPGQKDSDSLPDYEILDDILRRYVEQDQGVAEIAADGN 528 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 N Y + +R V L+ +EYKRRQ P+G KIT K+FGRDR PI+N++ D Sbjct: 529 NGAGYEPDLIRTVARLVDRAEYKRRQYPLGPKITPKAFGRDRRMPITNRWHD 580 >gi|325929041|ref|ZP_08190196.1| DNA-directed RNA polymerase, subunit H [Xanthomonas perforans 91-118] gi|325540574|gb|EGD12161.1| DNA-directed RNA polymerase, subunit H [Xanthomonas perforans 91-118] Length = 551 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/568 (39%), Positives = 317/568 (55%), Gaps = 44/568 (7%) Query: 5 LKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 L+IA+AQ + VG + N IA AR E D++LF EL ISGYPPEDL+ Sbjct: 10 LRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPPEDLL 63 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + T G VVG+P+ V N+ +L G I A K L Sbjct: 64 LRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKREL 121 Query: 118 PNYSEFHEKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 PNY+ F E+R F DP + + + +G++ICED+W + ++ GAE + Sbjct: 122 PNYAVFDERRYF----DVDPDGENCVVTVKGVHVGVVICEDLWFAEPLANTVRA-GAELV 176 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 177 LVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHP 236 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F +Q + ++ ++ DD +M + + A V L+DY +KN Sbjct: 237 AAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYCRKNG 290 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + Sbjct: 291 FSKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTATLSNDLADEQCRALGVKLE 350 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + I EN+QSR RG ILMALSN ++LTT NKSE Sbjct: 351 TIAIEPAFEGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEY 410 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + PSA Sbjct: 411 AVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISRPPSA 463 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYK 528 ELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ +E+K Sbjct: 464 ELRANQTDQDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRLNEWK 521 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 R Q+ G K++ ++FGR+R YPI+N +R Sbjct: 522 RHQSAPGPKVSRRAFGRERRYPITNGYR 549 >gi|325519658|gb|EGC98995.1| NAD synthetase [Burkholderia sp. TJI49] Length = 562 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 230/577 (39%), Positives = 335/577 (58%), Gaps = 38/577 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV-----------------LNSVVILDA 105 A + A+ L G ++VG P + GV N+V ++ Sbjct: 62 AAAADALIALADALKAFDGLAVLVGHPLRGAPGVDGNANGPIERGMPPTDTYNAVSLIVG 121 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + +P+VF +R G++ICED W +++ + Sbjct: 122 GAIVGTYRKQDLPNADVFDEKRYFAT--DAEPLVFELGGVRYGVIICEDAW-HASAAQIA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 179 KAAGAQVLLIPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 D Q L +M F E + + E+ + L A +PL+ + Y A VL + Sbjct: 239 DAQGALVAKMPQFDEGHAIVEFDGARPLP--------GAIAPELPLEAQV--YRALVLGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 289 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAAEMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + +++ ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRASLAEEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN + L +VIP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNETTDYA----LRDVIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 KINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 561 >gi|188575738|ref|YP_001912667.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520190|gb|ACD58135.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 547 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/568 (39%), Positives = 317/568 (55%), Gaps = 44/568 (7%) Query: 5 LKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 L+IA+AQ + VG + N IA AR + G D++LF EL ISGYPPEDL+ Sbjct: 6 LRIAMAQFDFPVGAVTQNTDRIIEYIAAAR------DEYGADIVLFPELAISGYPPEDLL 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + T G VVG+P+ V N+ +L G I A K L Sbjct: 60 LRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKREL 117 Query: 118 PNYSEFHEKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 PNY+ F E+R F DP + + +++G++ICED+W + +K GAE + Sbjct: 118 PNYAVFDERRYF----DVDPDGENCVVTVKGVQVGVVICEDLWFAEPLANTVKA-GAELV 172 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 173 LVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHP 232 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F +Q + ++ ++ DD +M + + A V L+DY KN Sbjct: 233 AAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYCSKNG 286 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + Sbjct: 287 FSKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLE 346 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + I EN+QSR RG ILMALSN ++LTT NKSE Sbjct: 347 TVAIEPAFEGLLAALGPLFAGTEPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEY 406 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSA Sbjct: 407 AVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRNT---VDG----APVIPPAVISRPPSA 459 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYK 528 ELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y ETV +V L+ +E+K Sbjct: 460 ELRDNQTDQDSLPPYDVLDAILYRYVDQEQS--RDDIVAAGYAAETVEHVLRLVRLNEWK 517 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 R Q+ G K++ ++FGR+R YPI+N +R Sbjct: 518 RHQSAPGPKVSRRAFGRERRYPITNGYR 545 >gi|167835859|ref|ZP_02462742.1| NAD synthetase [Burkholderia thailandensis MSMB43] Length = 569 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 234/584 (40%), Positives = 333/584 (57%), Gaps = 45/584 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQLN VGD AGN AK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNAAKIVAAAQAAHDAGAQLLIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP-------------------RQDQEGVL-----N 98 A +A+ L + G ++VG P R + G N Sbjct: 62 AASDAALAELAAQLKPLAGLAVLVGHPLRAGDAGAPGAPSADGNANRPIERGAAPADTYN 121 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKN 156 + ++ G + K +LPN F EKR F + + P VF + G++ICED+W + Sbjct: 122 AASLIVGGEVAGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVTFGVVICEDVW-H 178 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 ++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+F Sbjct: 179 ASAAQLAKAAGAQVLIVPNGSPYHMNKDTVRIDILRARIRETGLPMVYVNLVGGQDELVF 238 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADY 276 DG SF DG +L +M F E N + E+ L + + L E Y Sbjct: 239 DGGSFVLDGAGELVAKMPQFEEGNAIVEFDGAHPLP----------AAIAPALSVEAQVY 288 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A VL +RDY+ KN F IIGLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S Sbjct: 289 RALVLGVRDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADIST 348 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DAA A +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 TDAADMAARVGVRYDEIAIAPMFDAFRASLAGEFAGRAEDATEENIQARIRGTLLMALSN 408 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ LG Sbjct: 409 KFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEYGALG-- 466 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETV 515 +IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V Sbjct: 467 --IIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLSEIVAAGYSEADV 524 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 KRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFTESI 568 >gi|83718910|ref|YP_441438.1| NAD synthetase [Burkholderia thailandensis E264] gi|257139886|ref|ZP_05588148.1| NAD synthetase [Burkholderia thailandensis E264] gi|83652735|gb|ABC36798.1| glutamine dependent NAD+ synthetase [Burkholderia thailandensis E264] Length = 561 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 234/579 (40%), Positives = 341/579 (58%), Gaps = 43/579 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQLN VGD AGN+AK A + A+ G ++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP-----------RQDQEGV-----LNSVVILDAG 106 A +A+ L + G ++VG P R + GV N+ ++ G Sbjct: 62 AASDAALAELAAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIVGG 121 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLK 164 + K +LPN F EKR F + + P VF ++ G++ICED+W +++ + K Sbjct: 122 EVAGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVKFGVVICEDVW-HASAAQLAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF D Sbjct: 179 AAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 G +L +M F E N + E+ + L + + +Y A VL +R Sbjct: 239 GAGELVAKMPQFEEGNAIVEFDGARALPAAIAPALSVEAQVY----------RALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F IIGLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LMALSN ++ Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLLMALSNKFGSI 405 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ +++P Sbjct: 406 VLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYG----QPDIVP 461 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V Sbjct: 462 ERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRVTR 521 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 522 LIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFVESI 560 >gi|167618315|ref|ZP_02386946.1| NAD synthetase [Burkholderia thailandensis Bt4] Length = 561 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 234/579 (40%), Positives = 341/579 (58%), Gaps = 43/579 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQLN VGD AGN+AK A + A+ G ++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP-----------RQDQEGV-----LNSVVILDAG 106 A +A+ L + G ++VG P R + GV N+ ++ G Sbjct: 62 AASDAALAELAAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIVGG 121 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLK 164 + K +LPN F EKR F + + P VF ++ G++ICED+W +++ + K Sbjct: 122 EVAGTYRKQDLPNTEVFDEKRYFATDAA--PYVFELNGVKFGVVICEDVW-HASAAQLAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF D Sbjct: 179 AAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 G +L +M F E N + E+ + L + + +Y A VL +R Sbjct: 239 GTGELVAKMPQFEEGNAIVEFDGARALPAAIAPALSVEAQVY----------RALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F IIGLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHF-FSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 +G +YD + I + + F SL ++F L E+ + ENIQ+RIRG +LMALSN ++ Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDAT---EENIQARIRGTLLMALSNKFGSI 405 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ +++P Sbjct: 406 VLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYG----QPDIVP 461 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V Sbjct: 462 ERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRVTR 521 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 522 LIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFVESI 560 >gi|114331974|ref|YP_748196.1| NAD+ synthetase [Nitrosomonas eutropha C91] gi|114308988|gb|ABI60231.1| NAD+ synthetase [Nitrosomonas eutropha C91] Length = 535 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 225/558 (40%), Positives = 314/558 (56%), Gaps = 30/558 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+N + GD+ GN K A ++A G L++ E+ + G PED + + F+Q Sbjct: 1 MKIALAQINCMAGDLNGNPLKILHACQQAREAGARLVITPEMALCGSLPEDWLLRAEFVQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A+ L + HD +V+G P + +LN+V ++ G ++ K +L Sbjct: 61 VCHQALMDLATQIHD--VTLVIGHPHRTNGNLLNAVSVIRDGRLLITYGKNHLLTDPLLD 118 Query: 125 EKRTFISGYSNDPIVFR-DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G N P F D L L +++ + L+ + L ++ ASPY + Sbjct: 119 ERRYFTPG--NQPCTFECDGTLFGLTTFSDYQHPAHLQALRSADVQVLLTVGASPYAIDG 176 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R IV I+ LP +Y N VGGQDEL+FDGASF D +L Q+ F E + Sbjct: 177 QADRLRIVRAGITQTGLPTVYTNLVGGQDELVFDGASFAMDHSGKLVCQLAAFQETLGLI 236 Query: 244 EWHYDQQL-SQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E H +Q + Q + + D E+ Y+A L LRD++ KN V+IGLSGG Sbjct: 237 ELHNNQLIPGQCSPLPD-----------RIESVYSALRLGLRDFIDKNRISGVLIGLSGG 285 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +DSAL AIAVDALG + V +M+P YT+ SLEDA A LG Y +PI +L F Sbjct: 286 VDSALVLAIAVDALGADRVSNVMMPSPYTADISLEDAQIMAGNLGVHYTEIPITELFEQF 345 Query: 363 FSLMSQFLQEEPSG---IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + LQ P+ EN+Q+RIRG +LMAL+N S ++LTTSNKSE +VGY TLY Sbjct: 346 KQTLHPALQTYPATGPQTTMENLQARIRGTLLMALANQSGRLVLTTSNKSETAVGYSTLY 405 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF+ LKD+ KT V+QL +RN ++ +IP IL++ PSAELRP QTD Sbjct: 406 GDMAGGFSILKDVSKTLVYQLCHYRNR---------ISPIIPERILQRPPSAELRPDQTD 456 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q++LPPY +LD II VEN S Y +ETVR V H+++ EYKRRQA G +I Sbjct: 457 QDNLPPYAVLDAIIAAYVENNLSPAEIIAMNYPEETVRQVLHMIHSCEYKRRQAAPGIRI 516 Query: 539 TAKSFGRDRLYPISNKFR 556 T + FG +PI++ FR Sbjct: 517 TRRDFGPSWRFPITSGFR 534 >gi|124267300|ref|YP_001021304.1| NH(3)-dependent NAD(+) synthetase [Methylibium petroleiphilum PM1] gi|124260075|gb|ABM95069.1| NH(3)-dependent NAD(+) synthetase [Methylibium petroleiphilum PM1] Length = 559 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 230/568 (40%), Positives = 324/568 (57%), Gaps = 36/568 (6%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA+ Q N VGD+AGN + + +A QG L++ EL ++GYPPEDL+ + +F++AC Sbjct: 9 IALVQFNATVGDLAGNAQRIAQWSRQAYSQGARLVITPELSLTGYPPEDLLLRPAFMRAC 68 Query: 67 SSAIDTLKSDTHDG-GAGIVVGFPRQ-DQEGVL-----------NSVVILDAGNIIAVRD 113 A+ + D +VVG P+ D G L N+ +L G ++A Sbjct: 69 DEALAACAASLADLPDLQVVVGHPQAIDALGDLRTRSLAVQRRVNAASVLAGGRVMATYA 128 Query: 114 KINLPNYSEFHEKRTFISGYSND--PIVFRD--IRLGILICEDIWKNSNICKHLKKQGAE 169 K LPNY F E+R F+SG P+V +R+G+LICED W + A+ Sbjct: 129 KRELPNYQVFDERRYFVSGRDAGFGPLVVETGGLRVGLLICEDAWFDEPAAAAKAAG-AQ 187 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L +NASP++ K ++R E + + LP++Y + VGGQDE++FDGASF D + + Sbjct: 188 VLAVINASPFHLGKAEEREERMARRAVESGLPLLYSHLVGGQDEVVFDGASFAVDAKGAV 247 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F E+ + + D +S P E +A + A V +RDY+ K Sbjct: 248 RARAASFVEEVLAVQVNADGAVS---------GPLAPAPSLESQA-WAALVTGVRDYLGK 297 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N F IIGLSGGIDSAL A+AVDALG + V+ +M+P YT+ S DA A+ LG + Sbjct: 298 NGFPGAIIGLSGGIDSALVLAVAVDALGADRVRAVMMPSPYTADISWIDARDMARRLGVQ 357 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 YD + I + F S ++ ENIQ+RIRG +LMALSN S ++LTT NKS Sbjct: 358 YDEISIVPMFESFKSALALEFAGLAEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKS 417 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++ GY TLYGDM+GGF +KD+ KT V++LA+WRN+ G VIP I+ + P Sbjct: 418 EMATGYCTLYGDMAGGFAVIKDVAKTLVYRLAAWRNAQGAAP-------VIPERIITRPP 470 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP QTDQ+SLPPY +LD I+ R +E+++ Y V V L+ +EYK Sbjct: 471 SAELRPDQTDQDSLPPYDVLDAILARYMEDDQGVEEIVAAGYARTDVERVTRLIKINEYK 530 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 RRQAPVG +IT +SFG+D YPI++KFR Sbjct: 531 RRQAPVGIRITHRSFGKDWRYPITSKFR 558 >gi|221632485|ref|YP_002521706.1| glutamine-dependent NAD(+) synthetase [Thermomicrobium roseum DSM 5159] gi|221157196|gb|ACM06323.1| glutamine-dependent NAD(+) synthetase [Thermomicrobium roseum DSM 5159] Length = 586 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 222/587 (37%), Positives = 317/587 (54%), Gaps = 50/587 (8%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +IA+AQ++P VGD +GN+ R EA + G ++ F EL I+GYPPEDL+ K SFI A Sbjct: 11 RIALAQIDPTVGDFSGNVRLIRERAREAAQLGAHIVAFPELVITGYPPEDLLLKVSFIDA 70 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ L D ++VG P + + N IL G I+AV K +LP Y F E Sbjct: 71 ARRALHLLLDAIPD--RVLIVGVPWVESGILYNGAAILARGEIVAVVPKHHLPTYGVFDE 128 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 R F G ++ ++R G+ ICEDIW L +G + L ++N SPY+ K Sbjct: 129 DRYFARGSHTFRFLWGNLRFGVTICEDIWYPIGPASSLATRGIDLLVNINGSPYHRGKWI 188 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW 245 +R ++ + + + YVN VGGQDEL+FDG S D + + F E + + Sbjct: 189 QRQVMLQTRAADAGCYLAYVNMVGGQDELVFDGNSIVLDPNGTILARGTSFEEDLIVVDL 248 Query: 246 HYDQQLSQW------NYMS---------------------------DDSASTMYIPLQEE 272 + LS W +++ +S PL+ Sbjct: 249 PITRVLSSWLHDPRRRWLARAESQPALPVVDREIPLPVPGEQLPPLPESVQRPRTPLEGV 308 Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 Y A V +RDYV+K F +IGLSGGIDS+L A IA DALG ENV + +P +Y+S Sbjct: 309 AEVYQALVTGVRDYVRKTGFRTAVIGLSGGIDSSLTACIAADALGPENVTGLSMPSRYSS 368 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL-QEEPSGIVAENIQSRIRGNIL 391 S+EDA A+ LG ++ ++PI + F +++ Q E + EN+Q+RIRG IL Sbjct: 369 RHSIEDAEELARNLGIRFLIVPIEPVHRVFREVLAPLGNQPEEPDVADENLQARIRGTIL 428 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 M SN ++LTT NKSE++ GY TLYGDM+GGF LKD+ K V+QLA +RNS Sbjct: 429 MTYSNRFGPIVLTTGNKSEMACGYATLYGDMAGGFAVLKDVPKLLVYQLARYRNS----- 483 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQ 508 ++ VIP + K PSAELRP+Q D ++LPP+ ILD +++ VE + E I + Sbjct: 484 ----ISPVIPERVFVKPPSAELRPNQKDVDTLPPFEILDPLLELYVEQDLSREELIRHG- 538 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ E V V ++ +EYKRRQA G K+T ++FGRDR PI+N F Sbjct: 539 -FDPEIVDRVIMMVDRAEYKRRQAAPGVKLTPRAFGRDRRLPIANWF 584 >gi|323705926|ref|ZP_08117497.1| NAD+ synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534724|gb|EGB24504.1| NAD+ synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 545 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 229/571 (40%), Positives = 328/571 (57%), Gaps = 46/571 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLNP VGDI N K +EA + MDLI+F EL I GYPP+DL++ F++ Sbjct: 1 MKIALAQLNPTVGDIKNNCEKIIMNIKEAKKAQMDLIVFPELSIIGYPPKDLLYNPDFLE 60 Query: 65 ACSSAI-DTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNY 120 + D L +T G G++VG +D+E + NS ++L G I+ DK LPNY Sbjct: 61 TADRMLNDILLPETE--GIGVIVGTVTRDEEKDYLLHNSALLLYNGKIVGQADKTLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH-------LKKQ---GAEF 170 F E+R F I F+ +RL I ICEDIW + + + L++Q + Sbjct: 119 DVFDEQRYFEPAKKRACIDFKGVRLAINICEDIWNDKDFWERPRYDIDVLEEQYSLNPDI 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 +++ASPY K + + ++V LP+IYVNQVGG DELIFDG SF + + Sbjct: 179 FINISASPYNLGKHELKVKMVKQISKKYKLPLIYVNQVGGNDELIFDGNSFVINSNGERV 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 +K F E + +L + D + + ++ ++A +L LRDY +K Sbjct: 239 VNLKAFCEDLAFID---TDELEYLAPLKDINENISWV--------HDALILGLRDYFRKT 287 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F K ++GLSGGIDSA+ A+AV ALG+ENV + +P +Y+S S +DA A+ L +Y Sbjct: 288 GFKKAVVGLSGGIDSAVTCALAVKALGRENVLGVSMPSRYSSEGSKDDARDLAQNLNIEY 347 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVA----ENIQSRIRGNILMALSNHSKAMLLTTS 406 V+PI D+ + S+ ++ IV EN+Q+RIRGN LM +SN M+LTT Sbjct: 348 RVIPIEDVFKSYISIFNK-----DGNIVGDLAEENLQARIRGNYLMFISNREGHMVLTTG 402 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSEI+VGY TLYGDMSGG + D+ KT V++LA + N I +IP S +E Sbjct: 403 NKSEIAVGYCTLYGDMSGGLAVISDVPKTMVYELAKYINRENI---------IIPISTIE 453 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGS 525 K+PSAELRP+Q D +SLPPY ILDDI+K +E ++S + Y++ V+ V + + Sbjct: 454 KAPSAELRPNQKDTDSLPPYEILDDILKLYIEEDKSISEIVSRGYDEALVKDVIRKVNSA 513 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 EYKR+QA G K+T K+FG R PI+ +FR Sbjct: 514 EYKRKQAAPGLKVTTKAFGVGRRMPIAQRFR 544 >gi|183601391|ref|ZP_02962761.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219683448|ref|YP_002469831.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|241191109|ref|YP_002968503.1| putative amidohydrolase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196515|ref|YP_002970070.1| putative amidohydrolase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218997|gb|EDT89638.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219621098|gb|ACL29255.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|240249501|gb|ACS46441.1| Putative amidohydrolase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251069|gb|ACS48008.1| Putative amidohydrolase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178853|gb|ADC86099.1| Glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis BB-12] gi|295794098|gb|ADG33633.1| Putative amidohydrolase [Bifidobacterium animalis subsp. lactis V9] Length = 566 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 223/586 (38%), Positives = 322/586 (54%), Gaps = 50/586 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL+ A+AQ++ VG + GN K A +++F E+ ++GYP EDL +++ Sbjct: 1 MTKLRFALAQIDTCVGALKGNADKVLEYASRAASNNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--PRQDQEGVLNSVVILDAGNIIAVRDKIN 116 F QA + L D G G +VVG + N +V+L G + A DK Sbjct: 61 FRQAAWDTANDLAQRLADDGLGSLYVVVGTVGTEHSTQKPYNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F SG + + +RLG ICEDIW+ ++ + L ++N Sbjct: 121 LPNYGVFDEFRIFASGDRSVTMDIDGVRLGFAICEDIWQEGGPVADFAERNIDVLVTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V P+IYVNQVGGQD+L+FDG +F D L + F Sbjct: 181 SPYEEGKTDTRLQLCRRRAAEVGAPVIYVNQVGGQDDLVFDGGTFVVDADGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEAD---YNACVLSLRDYVQKN 290 E +Y+ DSA+ P E + D Y ACVL L+DY+ KN Sbjct: 241 VE--------------DLSYIDIDSAAATQKPADIAPEMDPDGEVYTACVLGLKDYMVKN 286 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F+ V +GLSGGIDSAL A +A DA+G E+VQ I +P Y+S S +DAA A+ LG Y Sbjct: 287 GFNGVCLGLSGGIDSALVATMAADAVGGEHVQGISMPSMYSSEGSKDDAAQLAENLGASY 346 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 DV PI + F Q + G+ AEN+Q+RIRG I+MA SN + L T NKSE Sbjct: 347 DVQPIKPEFDAFQK------QLDLEGVAAENLQARIRGVIVMAYSNSKGLLALATGNKSE 400 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN---SHGITSGLGPLT---------- 457 ++ GY T+YGD GG+ P+KD++KT+V+QL+ WRN G+ G P+ Sbjct: 401 LACGYSTIYGDAVGGYAPIKDVFKTKVWQLSRWRNKALKEGLGLGALPVVGYDPNAEGVV 460 Query: 458 ----EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN--NDQEYN 511 E+IP + + K+PSAELRP Q D +SLP Y ILD ++ +E+ E + +++ Sbjct: 461 PASGELIPNNSIVKAPSAELRPEQKDSDSLPEYYILDKVLTAYIEHSEGRADLLAHADFD 520 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++TV V L+ +E+KRRQ P+G K++A +FGRDR P+++ FR+ Sbjct: 521 EQTVDTVMRLVDRAEWKRRQYPLGPKVSALAFGRDRRLPVTDAFRE 566 >gi|206900932|ref|YP_002250055.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum H-6-12] gi|206740035|gb|ACI19093.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum H-6-12] Length = 540 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 225/566 (39%), Positives = 322/566 (56%), Gaps = 49/566 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQ+NP +GD+ GN+ K + A DLI+F EL I GYPP DL++ + Sbjct: 1 MKVAIAQINPTIGDLKGNLEKIISKIDRAKNLSADLIIFPELSIIGYPPRDLIYNMDLAK 60 Query: 65 ACSSAI-DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A +++ + + ++D GI++G P + + + NS + G + +DK LPNY F Sbjct: 61 AIETSLKEKIAPRSYD--IGIILGSPYYEDKNIYNSALFFYKGKLYFRQDKTLLPNYDVF 118 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI----------CKHLKKQGAEFLFS 173 EKR F +N PI F++ LGI ICEDIW + + + L QG + + + Sbjct: 119 DEKRYFKPASNNIPIKFKNKLLGITICEDIWNDKDYWNRKIYEIDPLEKLASQGIDIIIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPYYH K+ R +++ IIYVNQVGG DELIFDG S + LA+ Sbjct: 179 ISASPYYHGKISLRIDMLRHIARKYKKEIIYVNQVGGNDELIFDGTSLVMNKDGSLAWIG 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + + + +LS+ N ++ S +Y A VL +RDYV K F Sbjct: 239 KEFEEDFVVIDTN---KLSRENITINEDISFIY----------KALVLGVRDYVIKTGFK 285 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++ LSGGIDS++ A +AV ALGKENV I +P +Y+S +S DA AK LG +Y V+ Sbjct: 286 KALVALSGGIDSSVTACLAVAALGKENVLGIYMPSRYSSKESAIDAEMLAKNLGIEYRVI 345 Query: 354 PIHDLVNHFFSLMSQ----FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 PI + + F ++ F+ EN+Q+RIRGNI+M +SN ++L+T NKS Sbjct: 346 PIEKIFSSFIETLNPNNRVFMDN-----AEENLQARIRGNIIMFISNREGYLVLSTGNKS 400 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E+++GY TLYGDM+GG + + DL KT V++LA + N E+IP +L K P Sbjct: 401 ELAMGYCTLYGDMTGGLSVIGDLPKTLVYELARYINRD---------REIIPERVLRKPP 451 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSE 526 SAELRP+Q D++SLPPY +LD IIK +E+ E I YN E V V + E Sbjct: 452 SAELRPNQKDEDSLPPYHVLDPIIKSYIEDNLTVEEIIK--LGYNSELVENVVKKVDSME 509 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPIS 552 YKRRQAP K+T+K+FG R PI+ Sbjct: 510 YKRRQAPPVLKVTSKAFGVGRRMPIA 535 >gi|289662938|ref|ZP_06484519.1| NAD synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 538 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/560 (40%), Positives = 315/560 (56%), Gaps = 36/560 (6%) Query: 9 IAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +AQ + VG +A N IA AR E D++LF EL ISGYPPEDL+ + Sbjct: 1 MAQFDFPVGAVAQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPPEDLLLRPG 54 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ C A+ + + T G VVG+P+ V N+ +L G I A K LPNY+ Sbjct: 55 FLAHCEEALGRIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPNYA 112 Query: 122 EFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E+R F D VF + +++G++ICED+W + +K + AE + NASPY Sbjct: 113 VFDERRYFDVDPDGDNCVFTVKGVQVGVVICEDLWFAEPLANTVKAR-AELVLVPNASPY 171 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K +R ++ + I Y+N VGGQD L+FDGAS DG + F +Q Sbjct: 172 ERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVDQ 231 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + ++ ++ DD +M + + A V L+DY +KN F KV +GL Sbjct: 232 WLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYCRKNGFSKVWLGL 285 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 286 SGGIDSALVLAIAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETIAIEPAF 345 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T+Y Sbjct: 346 EGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYATIY 405 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + PSAELR +QTD Sbjct: 406 GDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISRPPSAELRDNQTD 458 Query: 480 QESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q+SLPPY +LD I+ R V+ E+S +D Y +TV +V L+ +E+KR Q+ G Sbjct: 459 QDSLPPYDVLDGILYRYVDQEQS--RDDIVAAGYAADTVEHVLRLVRLNEWKRHQSAPGP 516 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPI+N +R Sbjct: 517 KVSRRAFGRERRYPITNGYR 536 >gi|302342587|ref|YP_003807116.1| NAD+ synthetase [Desulfarculus baarsii DSM 2075] gi|301639200|gb|ADK84522.1| NAD+ synthetase [Desulfarculus baarsii DSM 2075] Length = 565 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/578 (39%), Positives = 320/578 (55%), Gaps = 45/578 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA AQ+NP VGD+A N A +A + ++ F EL + GYPPEDL+ K F+ Sbjct: 1 MRIAQAQINPTVGDLAANTAMILDYMAQARQAQAGVVCFPELAVCGYPPEDLLLKPRFLA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++ L G VVGFP + V N+ +L G + AV KI LPNY F Sbjct: 61 DARAAVERLALAAR--GVTAVVGFPLAEGGVVRNAAAVLAEGRVAAVYRKIELPNYGVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGIL--ICEDIWKNSNICKHLKKQ-GAEFLFSLNASPYYH 181 E+R F +G ++ ++ G+L ICED+W N + + Q G +++ SP++ Sbjct: 119 ERRYFAAG--DECLILDMGGTGVLVSICEDVWLAGNQVERVAAQAGVGLTINISGSPFHA 176 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 KL +R EI+ G + Y N VGGQDEL+FDG S D QL+ F++ + Sbjct: 177 GKLGQRLEILGGFARRSGAAMCYANLVGGQDELVFDGGSMIIDPDGQLSACAPRFTQGLY 236 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIP-----------------LQEEEADYNACVLSLR 284 + +D +L A+ +++ L E+ A L L Sbjct: 237 I----HDLELPTRPPRPTPGATIVHVAAPAAPSGKIAAQTRAPELNTEDEVLAALGLGLA 292 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DYV+KN F KV +GLSGGIDSAL AA+AV ALG +NV + +P +YTS ++L DA A Sbjct: 293 DYVRKNGFGKVTLGLSGGIDSALTAAVAVSALGAQNVVGVTMPSQYTSGETLSDAQLLAA 352 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + +P+ + + F M L P G+ AEN+Q+RIRG ILM LSN ++LT Sbjct: 353 NLGVELLTVPLKGVYDVFIDQMRPALGPGPLGVEAENLQARIRGAILMTLSNRFGWLVLT 412 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE +VGY TLYGDM+GGF +KD+ KT V++LA N +G E+IP S Sbjct: 413 TGNKSETAVGYCTLYGDMAGGFALIKDVPKTLVYRLARRVNQR---AG----RELIPAST 465 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE------ESFINNDQEYNDETVRYV 518 +E+ PSAELRP Q D +SLP Y +LD I++ VE + + D++ + VR V Sbjct: 466 IERPPSAELRPDQKDTDSLPEYDVLDPILQAYVEQDMVLDEIAALGLADKDVVAKVVRMV 525 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + +EYKRRQAP G KIT K+FGRDR PI+N++R Sbjct: 526 DL----NEYKRRQAPPGVKITPKAFGRDRRLPITNRYR 559 >gi|107023349|ref|YP_621676.1| NAD synthetase [Burkholderia cenocepacia AU 1054] gi|116690432|ref|YP_836055.1| NAD synthetase [Burkholderia cenocepacia HI2424] gi|105893538|gb|ABF76703.1| DNA-directed RNA polymerase, subunit H [Burkholderia cenocepacia AU 1054] gi|116648521|gb|ABK09162.1| DNA-directed RNA polymerase, subunit H [Burkholderia cenocepacia HI2424] Length = 572 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 230/590 (38%), Positives = 333/590 (56%), Gaps = 54/590 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QAC-----------------------------SSAIDTLKSDTHDGGAG--IVVGFPRQD 92 A S A D ++ DG A I G P D Sbjct: 62 AAAAAALDALADALKAFDGLAVLVGHPLRGPGSGAGDDARASAVDGNANRPIERGVPPTD 121 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILIC 150 N+V ++ G I+ K +LPN F EKR F + +P+VF ++ G++IC Sbjct: 122 ---TFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFAT--DTEPLVFELNGVKYGVIIC 176 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG 210 ED W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGG Sbjct: 177 EDAW-HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGG 235 Query: 211 QDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ 270 QDEL+FDG SF DG+ L +M F E + + E+ + L + L Sbjct: 236 QDELVFDGGSFVLDGEGGLVAKMPQFDEGHAIVEFDGARPLP----------GAIAPELS 285 Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 + Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P ++ Sbjct: 286 TDAQVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRF 345 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 T+ S DAA A+ +G +YD + I + + F ++ ENIQ+RIRG + Sbjct: 346 TADISTTDAAEMARRVGVRYDEIAIAPMFDAFRVALAGEFAGRAEDATEENIQARIRGTL 405 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ T Sbjct: 406 LMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNA---T 462 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 + G L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 463 TDYG-LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAG 521 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 522 YAQADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 571 >gi|190575604|ref|YP_001973449.1| NAD synthetase [Stenotrophomonas maltophilia K279a] gi|190013526|emb|CAQ47161.1| putative glutamine-dependent NAD synthase [Stenotrophomonas maltophilia K279a] Length = 544 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 224/564 (39%), Positives = 317/564 (56%), Gaps = 30/564 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 + ++IA+AQ + VGD+AGN I +AR+E G +L++F EL +SGYPPEDL+ Sbjct: 1 MASIRIAMAQFDFPVGDVAGNTERIIEMIGQARDE---YGAELVMFPELAVSGYPPEDLL 57 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + G VVG+P+ V N+ +L G + K L Sbjct: 58 LRPGFLYECEQAMARIATACR--GITAVVGWPQAAGAVVYNAASVLRDGLVEQTYRKREL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 PNY+ F E+R F VF I +G+LICED+W + ++ GA+ + N Sbjct: 116 PNYAVFDERRYFDVDPDGGSCVFEVNGIPVGLLICEDLWFAEPLADTVRA-GAQLVVVPN 174 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 175 ASPYERGKHAQRDAVLAARTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAA 234 Query: 236 FSEQNFMTEWHYDQQLSQW--NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F +Q + E YD Q ++ + DD +M + + A ++DY +KN F Sbjct: 235 FVDQWLLVE--YDGQTRRFMPHVWMDDGDESM------DALAWRAVTRGIQDYCRKNGFK 286 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV +GLSGGIDSAL A+AVDALG ENV + LP +YT+ S + AA +ALG K + + Sbjct: 287 KVWLGLSGGIDSALVLALAVDALGAENVTAVRLPSRYTAGMSNDLAAEQCQALGVKLEAV 346 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I ++ + + EN+QSR RG ILMAL+N +LLTT NKSE +V Sbjct: 347 SIEPAFKGLMESLAPMFEGTAPDVTEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAV 406 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY T+YGDM GG+ PLKDLYKT+VF L+ WRN T G P VIPP+++ + PSAEL Sbjct: 407 GYATIYGDMCGGYAPLKDLYKTEVFGLSKWRN----TVGGAP---VIPPAVISRPPSAEL 459 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 R +Q DQ+SLP Y +LD I+ R ++ E+S Y+ V V L+ SE+KR QA Sbjct: 460 RENQLDQDSLPAYDVLDGILYRYIDQEQSRTEIVAAGYDAAVVDRVLRLVRISEWKRHQA 519 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 G K++ ++FGR+R YPISN ++ Sbjct: 520 APGPKVSRRAFGRERRYPISNGYK 543 >gi|167585816|ref|ZP_02378204.1| NAD synthetase [Burkholderia ubonensis Bu] Length = 561 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 226/576 (39%), Positives = 335/576 (58%), Gaps = 37/576 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP-----------RQDQEGV-----LNSVVILDAG 106 A ++A+DTL ++ G ++VG P R + GV N+ ++ G Sbjct: 62 AASAAALDTLAAELKAFDGLAVLVGHPLRVPGVDGNANRPIERGVPPSDTYNAASLIVGG 121 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLK 164 I+ K +LPN F EKR F + +P+VF ++ G+++CED W +++ + K Sbjct: 122 EIVGTYRKQDLPNAEVFDEKRYFAT--DAEPLVFDLNGVKFGVIVCEDAW-HASAAQIAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA+ L N SPY+ NK R +I+ +I LP+ YVN VG QDEL+FDG SF D Sbjct: 179 AAGAQVLLIPNGSPYHMNKEAVRMDILRARIRETGLPMAYVNLVGAQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 L +M F E + + E+ + L + L E Y A VL +R Sbjct: 239 AAGALVAKMPQFEEGHAIVEFDGARPLP----------GAIAPELSLEAQVYRALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F ++GLSGG+DSAL AIA DALG E V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGALVGLSGGVDSALVLAIACDALGPERVRAVMMPSRYTADISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++LT Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAGEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVLT 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ + ++IP I Sbjct: 409 TGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEYA----TRDIIPERI 464 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLY 523 L ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V L+ Sbjct: 465 LTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVQRVTRLIK 524 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 INEYKRRQAPIGIRVTHRAFGRDWRYPITSRFAERL 560 >gi|256375054|ref|YP_003098714.1| NAD+ synthetase [Actinosynnema mirum DSM 43827] gi|255919357|gb|ACU34868.1| NAD+ synthetase [Actinosynnema mirum DSM 43827] Length = 571 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 216/583 (37%), Positives = 322/583 (55%), Gaps = 40/583 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ+N VGD+AGN A +A G L++F E+ ++GYP EDLV ++S Sbjct: 1 MPQLRLALAQVNACVGDLAGNSALVVDWTRKAVEAGAHLVVFPEMVLTGYPVEDLVLRES 60 Query: 62 FIQACSSAIDTLKSDTHD----GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F A +A+ L + T D GG + G+ D+ G NS +L G ++A + K +L Sbjct: 61 FTSASKAALTDLAA-TLDREGLGGIAVFAGYLDGDERGKRNSAAVLHGGQVVARQHKHHL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F E+R F G + + + + +G++ICED+W++ L + G + + S NAS Sbjct: 120 PNYGVFDERRYFRRGDALEVVRLHGVEVGLVICEDLWQDGGPVAALGQAGVDLVVSPNAS 179 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K R +V + + P+ YVN +GGQDEL+FDG + L + F Sbjct: 180 PYERKKDDVRLPLVARRAAEAGAPLAYVNLIGGQDELVFDGDTMVVGADGSLLTRAPQFV 239 Query: 238 E----------------QNFMTEWHY------DQQLSQWNYMSDDSASTMYIPLQEEEAD 275 E + + +H D+ L ++ + +++ PL +E Sbjct: 240 EHLVVLDLDLPGGAARTEGDVAGFHVTRKVISDEPLPRYEPLPVPASAE---PLSDEAEV 296 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 ++A V LRDYV KN F V++GLSGGIDSA+ A++AVDALG ++V + +P Y+S S Sbjct: 297 WHALVTGLRDYVHKNGFRSVVLGLSGGIDSAVVASLAVDALGADSVHGVSMPSVYSSDHS 356 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 DA A+ G Y PI +V F + +G+ EN+Q+R RG LM LS Sbjct: 357 RSDAEDLAQRTGLHYSEQPIPTMVAAFVDQLGL------TGLAEENVQARCRGMTLMGLS 410 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N ++L T NK+E++VGY T+YGD GGF P+KD+ KT V+ LA WRN+ G P Sbjct: 411 NQHGHLVLATGNKTELAVGYSTIYGDAVGGFAPIKDVLKTLVWDLARWRNAEAEKRGELP 470 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDET 514 IP + + K PSAELRP Q D +SLP Y +LD ++ VE ++ + D + E Sbjct: 471 ---PIPENSISKPPSAELRPGQVDTDSLPDYELLDSVLDDYVEGDKGYRALLDSGFAPEL 527 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V V ++ +EYKRRQ P GTKI+ K+FGRDR PI+N +R+ Sbjct: 528 VDRVLRMVDRAEYKRRQYPPGTKISNKAFGRDRRLPITNGWRE 570 >gi|238918827|ref|YP_002932341.1| NAD synthetase [Edwardsiella ictaluri 93-146] gi|238868395|gb|ACR68106.1| glutamine-dependent NAD(+)(+) [Edwardsiella ictaluri 93-146] Length = 457 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 205/471 (43%), Positives = 290/471 (61%), Gaps = 20/471 (4%) Query: 86 VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRL 145 +G P +D + + N++ + G ++A K LPNY F EKR F +G + + + RL Sbjct: 1 MGHPWRDGDCLYNALSVFAEGRLLARYYKQRLPNYGVFDEKRYFSAGDTPCTVTLKGYRL 60 Query: 146 GILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV 205 G+LICED+W ++ + L GAE L ++NASPY K R+ ++ LP++Y+ Sbjct: 61 GLLICEDVWFDAPV-DALAAAGAEVLLTINASPYNREKPYMRNTLLADHCRRTGLPLLYL 119 Query: 206 NQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM 265 NQVGGQDEL+FDG S FD L ++ FSEQ +T+ D + S + Sbjct: 120 NQVGGQDELVFDGCSKAFDASGVLTHRLAAFSEQ--VTQVRLDDG----RLLPMTSPAAE 173 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 PL + Y A VL++RDYV KN F ++GLSGGIDSAL AIAVDALGKE VQ +M Sbjct: 174 LPPLAQI---YQALVLAVRDYVGKNGFQGAVLGLSGGIDSALTLAIAVDALGKERVQAVM 230 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P++YT+ S+ DA A +G ++D+L I + + F ++ EN+Q+R Sbjct: 231 MPFRYTADISVADAREQALTMGVEFDILSIEPMFDAFMGQLAPMFAGTERDTTEENLQAR 290 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 RG +LMALSN + ++LTT NKSE++VGY TLYGDM+GGF+ LKD+ KT VFQLA +RN Sbjct: 291 CRGVVLMALSNKRRRLVLTTGNKSEMAVGYATLYGDMAGGFDVLKDVPKTLVFQLARYRN 350 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 + LT VIP ++++ PSAEL P Q DQ+SLPPY ILD I++ VE + S Sbjct: 351 T---------LTPVIPQRVIDRPPSAELAPDQIDQDSLPPYDILDAILQGYVEQDRSVAQ 401 Query: 506 NDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +++ VR V L+ +EYKRRQA VG +ITA++FG+DR YPI++ F Sbjct: 402 LVADGFDEAVVRKVIRLVDINEYKRRQAAVGPRITARNFGKDRRYPITSGF 452 >gi|28198744|ref|NP_779058.1| NAD synthetase [Xylella fastidiosa Temecula1] gi|182681436|ref|YP_001829596.1| NAD synthetase [Xylella fastidiosa M23] gi|81438866|sp|Q87D47|NADE_XYLFT RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolysing] gi|28056835|gb|AAO28707.1| NH3-dependent NAD synthetase [Xylella fastidiosa Temecula1] gi|182631546|gb|ACB92322.1| NAD+ synthetase [Xylella fastidiosa M23] Length = 545 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 225/568 (39%), Positives = 321/568 (56%), Gaps = 36/568 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDL 56 M + L+IA+AQ + VG +A N IA +AR+E G D+++F EL +SGYPPEDL Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNAERIIALIEQARDE---HGADVVMFPELALSGYPPEDL 57 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 + + F+ C AI+ + + TH G VVG+P+ V N +L G + K Sbjct: 58 LLRPGFLAHCQVAIERIAAATH--GIVAVVGWPQSAGSVVYNVASVLCDGQVEQTYRKRE 115 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPNY+ F E+R F + VF+ + +G+LICED+W + + + GAE + Sbjct: 116 LPNYAVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLWFSEPLADTVCG-GAELVLVP 174 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ Sbjct: 175 NASPYERGKHAQRDALLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAA 234 Query: 235 HFSEQNFMTEWHYDQQL---SQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 FS+Q + ++ ++ QW S+ S + + + A V ++DY +KN Sbjct: 235 AFSDQWLVVDYMRSERRFVPLQWVVESEVSINALV---------WRAVVRGVQDYCRKNG 285 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + + Sbjct: 286 FSKVWVGLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVRLE 345 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + + EN+QSR RG ILMAL+N +LLTT NKSE Sbjct: 346 TVAIEPVFEGLLAALGPLFAGMAPDATEENLQSRSRGVILMALANKFGGLLLTTGNKSEY 405 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKD+YK+QVF+LA WRN ++ L IPP ++ + PSA Sbjct: 406 AVGYATIYGDMCGGYAPLKDIYKSQVFELAQWRNR--VSDVLA-----IPPGVIHRPPSA 458 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYK 528 ELR QTDQ+SLPPY +LD I+ V+ E+S D Y V YV +L+ +E+K Sbjct: 459 ELRAQQTDQDSLPPYEVLDGILSLYVDQEQS--REDIIAAGYAAGVVDYVLNLVRINEWK 516 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 R QA G K++ ++FGR+R YPISN +R Sbjct: 517 RHQAAPGPKVSQRAFGRERRYPISNAYR 544 >gi|58581218|ref|YP_200234.1| NAD synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425812|gb|AAW74849.1| NH3-dependent NAD synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 552 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/568 (39%), Positives = 316/568 (55%), Gaps = 44/568 (7%) Query: 5 LKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 L+IA+AQ + VG + N IA AR E D++LF EL ISGYPPEDL+ Sbjct: 11 LRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPPEDLL 64 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + T G VVG+P+ V N+ +L G I A K L Sbjct: 65 LRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKREL 122 Query: 118 PNYSEFHEKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 PNY+ F E+R F DP + + +++G++ICED+W + +K GAE + Sbjct: 123 PNYAVFDERRYF----DVDPDGENCVVTVKGVQVGVVICEDLWFAEPLANTVKA-GAELV 177 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 178 LVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHP 237 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F +Q + ++ ++ DD +M + + A V L+DY KN Sbjct: 238 AAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYCSKNG 291 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + Sbjct: 292 FSKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLE 351 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + I EN+QSR RG ILMALSN ++LTT NKSE Sbjct: 352 TVAIEPAFEGLLAALGPLFAGTEPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEY 411 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSA Sbjct: 412 AVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRNT---VDG----APVIPPAVISRPPSA 464 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYK 528 ELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y ETV +V L+ +E+K Sbjct: 465 ELRDNQTDQDSLPPYDVLDAILYRYVDQEQS--RDDIVAAGYAAETVEHVLRLVRLNEWK 522 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 R Q+ G K++ ++FGR+R YPI+N +R Sbjct: 523 RHQSAPGPKVSRRAFGRERRYPITNGYR 550 >gi|134296598|ref|YP_001120333.1| NAD synthetase [Burkholderia vietnamiensis G4] gi|134139755|gb|ABO55498.1| DNA-directed RNA polymerase, subunit H [Burkholderia vietnamiensis G4] Length = 570 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 230/585 (39%), Positives = 337/585 (57%), Gaps = 46/585 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHDDGAHLMIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG-------------------------VL 97 A ++A+D L + G ++VG P + G Sbjct: 62 TAAAAALDALADALREFNGLAVLVGHPLRSAAGEAAGGEPAVDGNANRPIERGVPPVDTY 121 Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWK 155 N+ ++ G I+ K +LPN F EKR F + +P+VF ++ G++ICED W Sbjct: 122 NAASLIVGGKIVGTYRKQDLPNADVFDEKRYFAT--DTEPLVFELNGVKYGVIICEDAW- 178 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+ Sbjct: 179 HASAAQIAKAAGAQVLLIPNGSPYHMNKEALRIDILRARIRETGLPMVYVNLVGGQDELV 238 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD 275 FDG SF DG L +M F E + + E+ + L A +P+ + Sbjct: 239 FDGGSFVLDGDGVLVAKMPLFDEGHAIVEFDGARPLP--------GAIAPELPVDAQV-- 288 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S Sbjct: 289 YRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADIS 348 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMALS Sbjct: 349 TTDAAEMARRVGVRYDEIAIAPMFDAFRAALAGEFAGRAEDATEENIQARIRGTLLMALS 408 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N +++LTT NKSE++VGY TLYGDM+GGF +KD+ KTQV+QL +RN+ T G Sbjct: 409 NKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTQVYQLCRYRNA---TPDYG- 464 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDET 514 +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + Sbjct: 465 TRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLGEIVAAGYAEAD 524 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 VARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERV 569 >gi|251770857|gb|EES51444.1| NAD+ synthetase [Leptospirillum ferrodiazotrophum] Length = 593 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 230/604 (38%), Positives = 333/604 (55%), Gaps = 62/604 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ LK+ + Q+N VVGD+ GN A+ RR E + +D+ F EL I+GYPPEDL+ K + Sbjct: 1 MRSLKVGLFQMNSVVGDLEGNAARIRRHLESPVAKSLDIAAFPELAITGYPPEDLLLKPT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ + TL + ++VGF Q + + N+ I+ G ++ V+ K LPNY Sbjct: 61 FLEKNRQVLATLFDMAPE--LLVIVGFVEQADD-IYNAAAIIYRGRLVGVQRKQYLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F SG SN + +R+ +G+ ICEDIW H G AE + +L+ASP++ Sbjct: 118 VFDENRYFQSGSSNTLVRYRNTTIGVNICEDIWYPKGPLYHQALDGDAEVIVNLSASPFH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R ++ + + I+Y N VGGQDEL+FDG S + ++ + + F+E Sbjct: 178 AGKREVRESMLKTRAADNGTYIVYTNLVGGQDELVFDGQSLVISPEGEIECRGRAFAEDV 237 Query: 241 FMTEWHYD--------------QQLSQ-----WN----YMSDDSA--------------- 262 +TE D ++LS+ W M D A Sbjct: 238 VVTEIDVDRVFGVRLHDPRRRKEKLSRVYGADWGSFPMTMVDLDAMNGTPSPPPQKPRRL 297 Query: 263 --STMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN 320 + PL + E Y A + +RDYV KN V++G+SGG+DSAL AAIA DALG Sbjct: 298 ERGPLNTPLSDVEEVYEALTMGVRDYVAKNRLTDVLVGISGGVDSALVAAIACDALGPAR 357 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL----QEEPSG 376 V + +P YTS +S EDA A + ALG + + +PI +L + F S ++ ++P G Sbjct: 358 VHGVFMPSVYTSAESREDATALSAALGFRLETIPIKELCDSFASALAPSFGDRHAKDPEG 417 Query: 377 -IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 EN+Q RIRG +LMALSN ++LTT NKSE+ VGY TLYGDM+GGF LKD+ KT Sbjct: 418 DTTDENLQPRIRGMLLMALSNKFGHLVLTTGNKSEMGVGYMTLYGDMAGGFAVLKDVPKT 477 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKR 495 +V+ L RNS G + IP ILEK+P+AELRP Q D +SLP Y ILD I+ Sbjct: 478 EVYALCRLRNSRGPGA--------IPERILEKAPTAELRPDQRDTDSLPSYDILDPIMAA 529 Query: 496 IVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 VE + E + + ++ V V L+ SEYKRRQ+P G KI+ ++FG+D P++ Sbjct: 530 YVEEDLGYEEIVG--RGFDPADVARVIRLVDRSEYKRRQSPPGVKISLRAFGKDWRLPMT 587 Query: 553 NKFR 556 N+F+ Sbjct: 588 NRFK 591 >gi|323525223|ref|YP_004227376.1| NAD+ synthetase [Burkholderia sp. CCGE1001] gi|323382225|gb|ADX54316.1| NAD+ synthetase [Burkholderia sp. CCGE1001] Length = 593 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 233/598 (38%), Positives = 336/598 (56%), Gaps = 49/598 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQINVTVGDFAGNVAKIVAAARHAHHAGAKLLIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQD-----------------------------Q 93 A ++A+ L + G ++VG P +D + Sbjct: 62 TASAAALADLATQLKQFAGLHVIVGHPLRDDANGGANSGANGGANGGANQAHGNANRPIE 121 Query: 94 EGV-----LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLG 146 G+ N+ +L G I K +LPN F EKR F S P VF ++ G Sbjct: 122 RGLPPVDTFNAASLLADGRIAGTYRKQDLPNTEVFDEKRYFAS--DPQPFVFELDGLKYG 179 Query: 147 ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 ++ICED W +++ + K GA+ L N SP++ NK R +I+ +I LP++YVN Sbjct: 180 VVICEDAW-HASAAQMAKAAGAQVLLIPNGSPFHLNKEAVRFDILRARIRETGLPMVYVN 238 Query: 207 QVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQL---SQWNYMSDDSAS 263 VG QDEL+FDG SF D Q +L +M F E ++ + + + S Sbjct: 239 MVGAQDELVFDGGSFVLDAQGELVAKMAQFEEATAFVDFDNGAPVRGEADGVANAGSGVS 298 Query: 264 TMYIP-LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ 322 + P L E Y A V+ +RDYV KN F IIGLSGG+DSAL A+A DALG E V+ Sbjct: 299 SAIAPELSLEAQVYAALVMGVRDYVNKNGFPGAIIGLSGGVDSALVLAVACDALGAERVR 358 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI 382 +M+P +YT+ S DAA A+ +G +YD + I + + F S ++Q + P ENI Sbjct: 359 AVMMPSRYTADISTTDAADMARRVGVRYDEIAIAPMFDAFRSSLAQEFEGRPEDATEENI 418 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L Sbjct: 419 QARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCH 478 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES 502 +RN +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Sbjct: 479 YRNQAASFEK----QDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRS 534 Query: 503 FIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y E V+ V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 535 LAEIVAAGYAAEDVKRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPV 592 >gi|288817743|ref|YP_003432090.1| NH3-dependent NAD+ synthetase [Hydrogenobacter thermophilus TK-6] gi|288787142|dbj|BAI68889.1| NH3-dependent NAD+ synthetase [Hydrogenobacter thermophilus TK-6] gi|308751342|gb|ADO44825.1| NAD+ synthetase [Hydrogenobacter thermophilus TK-6] Length = 565 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 226/580 (38%), Positives = 322/580 (55%), Gaps = 42/580 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL I IAQ++ VGD+ GN K + EE +R LI+F EL +SGYPPEDL+ + Sbjct: 1 MKSKLNITIAQMDITVGDVEGNAIKILKIWEEYHRVS-HLIVFPELALSGYPPEDLLLRM 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 FI+ C +D ++ + A ++G P + + + NS +++ G ++A K LPNY Sbjct: 60 DFIKECQRWLDIIRDASAKFEAMALIGTPFYEGD-LYNSALLVGGGKLLAYYHKHFLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F G + ++++GI +CED+W + + GA L ++NASPYY Sbjct: 119 SVFDEKRYFRKGTYGTMVELGEVKIGISVCEDLWHPDGLERTYAIMGAHALININASPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + + + + ++YVN VGGQDEL+FDG S D + + K F E Sbjct: 179 FGKYEFKEAFLKARAEDNLCYVVYVNAVGGQDELVFDGRSLVIDPDGHICARAKAFEEDV 238 Query: 241 FMTEWHYDQ-----------QLSQWNYMSDDSASTMYIPLQ-----------EEEADYNA 278 ++ + + Y + Y L+ +EE Y A Sbjct: 239 LTVSLDVEKVKRRRLLDTRLREGKEKYHVISCGADTYRELEVFPPRVERNPKDEEEIYTA 298 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L YV+KNNF KV++GLSGGIDS+L A +AVDALG + V I +P ++TS +S ED Sbjct: 299 LKTGLEAYVKKNNFSKVVLGLSGGIDSSLVACLAVDALGSDRVVGIFMPSEFTSKESKED 358 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A + AK LG + PI + F L G+ EN+Q+RIR NIL LSN Sbjct: 359 AVSLAKNLGIELYQFPIDVIFKSF----RDTLGFTDFGVADENLQARIRANILFYLSNRY 414 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 ++L+TSNKSE SVGY T+YGDM+GGF PLKD+YKT V++LA +RNS L Sbjct: 415 GWLVLSTSNKSEASVGYTTIYGDMAGGFAPLKDVYKTLVYRLARYRNS---------LRP 465 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETV 515 IP + +K PSAELRP Q DQ++LPPY +LD I+ +E ++E + + + ETV Sbjct: 466 DIPERVFQKPPSAELRPGQKDQDTLPPYQMLDQILTLYIEEGLSQEEIVQ--KGIDRETV 523 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V ++ +EYKRRQAPVG KIT ++FG+D PI+N + Sbjct: 524 EKVIRMIRLAEYKRRQAPVGIKITPRAFGKDWRMPITNMW 563 >gi|325916246|ref|ZP_08178527.1| DNA-directed RNA polymerase, subunit H [Xanthomonas vesicatoria ATCC 35937] gi|325537540|gb|EGD09255.1| DNA-directed RNA polymerase, subunit H [Xanthomonas vesicatoria ATCC 35937] Length = 538 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 225/560 (40%), Positives = 315/560 (56%), Gaps = 38/560 (6%) Query: 9 IAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +AQ + VG +A N IA AR E D++LF EL ISGYPPEDL+ + Sbjct: 1 MAQFDFPVGAVAKNTDRIIEFIAMARDEFE------ADIVLFPELAISGYPPEDLLLRPG 54 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ C A+ + T G V+G+P+ V N+ +L G I A K LPNY+ Sbjct: 55 FLAHCEEALARIAVSTR--GIVAVIGWPQSAGSVVYNAASVLRDGRIEATYRKRELPNYA 112 Query: 122 EFHEKRTFISGYSNDPIV--FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E+R F D V +D+++G++ICED+W + K ++ GAE + NASPY Sbjct: 113 VFDERRYFDVDPDGDNCVVTIKDVQVGVVICEDLWFAEPLAKTVQA-GAELVLVPNASPY 171 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K +R ++ + I Y+N VGGQD L+FDGAS DG + F +Q Sbjct: 172 ERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVDQ 231 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + ++ ++ DD +M + + A + L+DY +KN F KV +GL Sbjct: 232 WLVVDYAAGERRFTPVVWVDDGDESM------DALAWRAVMRGLQDYCRKNGFSKVWLGL 285 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL A+AVDALG +NV + LP +YT+ S + A +A+G K + + I Sbjct: 286 SGGIDSALVLAMAVDALGGDNVTAVRLPSRYTAGLSNDLAEEQCRAMGVKLETIAIEPAF 345 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + + + I EN+QSR RG ILMALSN +LLTT NKSE +VGY T+Y Sbjct: 346 EGLLAALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLLLTTGNKSEYAVGYATIY 405 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + PSAELR +QTD Sbjct: 406 GDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISRPPSAELRDNQTD 458 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q+SLPPY +LD I+ R V+ E+S D+ Y +TV +V L+ +E+KR QA G Sbjct: 459 QDSLPPYDVLDGILYRYVDQEQS---RDEIVAAGYAADTVEHVLRLVRINEWKRHQAAPG 515 Query: 536 TKITAKSFGRDRLYPISNKF 555 K++ ++FGR+R YPI+N + Sbjct: 516 PKVSRRAFGRERRYPITNGY 535 >gi|84623136|ref|YP_450508.1| NAD synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367076|dbj|BAE68234.1| NH3-dependent NAD synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 551 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/568 (39%), Positives = 316/568 (55%), Gaps = 44/568 (7%) Query: 5 LKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 L+IA+AQ + VG + N IA AR E D++LF EL ISGYPPEDL+ Sbjct: 10 LRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFE------ADIVLFPELAISGYPPEDLL 63 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + T G VVG+P+ V N+ +L G I A K L Sbjct: 64 LRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKREL 121 Query: 118 PNYSEFHEKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 PNY+ F E+R F DP + + +++G++ICED+W + +K GAE + Sbjct: 122 PNYAVFDERRYF----DVDPDGENCVVTVKGVQVGVVICEDLWFAEPLANTVKA-GAELV 176 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 177 LVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHP 236 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F +Q + ++ ++ DD +M + + A V L+DY KN Sbjct: 237 AAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESM------DALAWRAVVRGLQDYCSKNG 290 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + Sbjct: 291 FSKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLE 350 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + I EN+QSR RG ILMALSN ++LTT NKSE Sbjct: 351 TVAIEPAFEGLLAALGPLFAGTEPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEY 410 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSA Sbjct: 411 AVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRNT---VDG----APVIPPAVISRPPSA 463 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYK 528 ELR +QTDQ+SLPPY +LD I+ R V+ E+S +D Y ETV +V L+ +E+K Sbjct: 464 ELRDNQTDQDSLPPYDVLDAILYRYVDQEQS--RDDIVAAGYAAETVEHVLRLVRLNEWK 521 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 R Q+ G K++ ++FGR+R YPI+N +R Sbjct: 522 RHQSAPGPKVSRRAFGRERRYPITNGYR 549 >gi|88707054|ref|ZP_01104750.1| glutamine-dependent NAD+ synthetase [Congregibacter litoralis KT71] gi|88698704|gb|EAQ95827.1| glutamine-dependent NAD+ synthetase [Congregibacter litoralis KT71] Length = 540 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 221/561 (39%), Positives = 323/561 (57%), Gaps = 33/561 (5%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 + I +AQ+N VGD GN I A +A EE Q +++F EL +SGYPPEDL+ + Sbjct: 1 MHILMAQINTQVGDFTGNADQVIEVATQACEE---QDSPVVVFPELTLSGYPPEDLLLRP 57 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + + AI L + A ++VG+P + + + N + G + A K LPNY Sbjct: 58 ALCKRVNDAIIRLHRELPPQ-AWVIVGYPIRREGLLYNCAGVFHDGELKAEYRKNELPNY 116 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + R+G+ ICEDIW S GAE L +LNASP++ Sbjct: 117 QVFDEKRYFTAGSEPCVLEIQGTRVGLSICEDIWV-SGPSAAAATAGAELLINLNASPFH 175 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K ++R +++ + +L +YVNQVGGQDEL+FDG SF + +L Q F + Sbjct: 176 RGKQQERLDLLARRCRDNNLAAVYVNQVGGQDELVFDGGSFAMNSDGKLVAQSPRFETAS 235 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 EW S + + L + A + A VL +RDYV KN F V++GLS Sbjct: 236 NWCEWTDSGSASGFR------EGVLSEALDDMAAVWQALVLGMRDYVNKNGFPSVVLGLS 289 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A+AVDALG V+ +M+P++YTS S+ DAA + LG ++ V+ I + Sbjct: 290 GGVDSALTLAVAVDALGASRVEAVMMPFRYTSDISIADAAEQSATLGVRHSVISIEPIYE 349 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + + EN+Q+R RG +LM++SN ++++LTT NKSE++VGY TLYG Sbjct: 350 SFLAALKDEFAGLDADTTEENLQARCRGVLLMSISNKKRSLVLTTGNKSELAVGYSTLYG 409 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT V+ L +RNS L+ IP ++E+ PSAEL P Q D+ Sbjct: 410 DMAGGFDVLKDVPKTLVYALCRYRNS---------LSPCIPERVIERPPSAELAPDQKDE 460 Query: 481 ESLPPYPILDDIIKRIVENE---ESFINND--QEYNDETVRYVEHLLYGSEYKRRQAPVG 535 +SLPPY +LD I++ VE + E+ I +E + VR V+ +EYKRRQAP+G Sbjct: 461 DSLPPYDVLDRILELYVEQDFSAEAIIAEGIPREDVERAVRLVDL----NEYKRRQAPIG 516 Query: 536 TKITAKSFGRDRLYPISNKFR 556 +IT + FGRDR YPI++ +R Sbjct: 517 VRITQRGFGRDRRYPITSAWR 537 >gi|15838555|ref|NP_299243.1| NAD synthetase [Xylella fastidiosa 9a5c] gi|81547291|sp|Q9PC24|NADE_XYLFA RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolysing] gi|9107063|gb|AAF84763.1|AE004015_6 NH3-dependent NAD synthetase [Xylella fastidiosa 9a5c] Length = 545 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 225/568 (39%), Positives = 322/568 (56%), Gaps = 36/568 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDL 56 M + L+IA+AQ + VG +A N IA +AR+E G D+++F EL +SGYPPEDL Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNAERIIALIEQARDE---HGADVVMFPELALSGYPPEDL 57 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 + + F+ C AI+ + + TH G VVG+P+ V N +L G + K Sbjct: 58 LLRPGFLAHCQVAIERIAAATH--GIVAVVGWPQSAGSVVYNVASVLCDGQVEQTYRKRE 115 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPNY+ F E+R F + VF+ + +G+LICED+W + + + GAE + Sbjct: 116 LPNYAVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLWFSEPLADTVCG-GAELVLVP 174 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ Sbjct: 175 NASPYERGKHAQRDALLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAA 234 Query: 235 HFSEQNFMTEWHYDQQL---SQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 FS+Q + ++ ++ QW S+ S + + + A V ++DY +KN Sbjct: 235 AFSDQWLVVDYMRSERRFVPLQWVAESEVSINALV---------WRAVVRGVQDYCRKNG 285 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + + Sbjct: 286 FSKVWVGLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVRLE 345 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + + EN+QSR RG ILMAL+N +LLTT NKSE Sbjct: 346 TVAIEPVFEGLLAALGPLFAGMAPDATEENLQSRSRGVILMALANKFGGLLLTTGNKSEY 405 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKD+YK+QVF+LA WRN+ ++ L IPP ++ + PSA Sbjct: 406 AVGYATIYGDMCGGYAPLKDIYKSQVFELAQWRNT--VSDVLA-----IPPGVIHRPPSA 458 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYK 528 ELR QTDQ+SLPPY +LD I+ V+ E+S D Y V YV +L+ +E+K Sbjct: 459 ELRAQQTDQDSLPPYEVLDGILSLYVDQEQS--REDIIAAGYAAGVVDYVLNLVKINEWK 516 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 R QA G K++ ++FGR+R YPISN +R Sbjct: 517 RHQAAPGPKVSQRAFGRERRYPISNAYR 544 >gi|160900307|ref|YP_001565889.1| NAD+ synthetase [Delftia acidovorans SPH-1] gi|160365891|gb|ABX37504.1| NAD+ synthetase [Delftia acidovorans SPH-1] Length = 559 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/558 (40%), Positives = 319/558 (57%), Gaps = 18/558 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L I AQLN VVGD+ GN+ K A EA G L+L EL + GY EDL + +F+ Sbjct: 13 LSICTAQLNFVVGDLPGNVQKIIAAAREAYATGARLLLTPELALCGYAAEDLYLRPAFLD 72 Query: 65 ACSSAIDTLKSDTHDG-GAGIVVGFPRQD--QEGVL-NSVVILDAGNIIAVRDKINLPNY 120 AC A+ L +T G +V+G P +D G L N+ +L G + K LPNY Sbjct: 73 ACDQAVQQLALETAQWPGLALVLGHPWRDPGAGGALRNAASVLRDGRVECSHAKQCLPNY 132 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F++G S I + +R+G+LICED W + + + GA+ L +NASP++ Sbjct: 133 GVFDEQRYFVAGQSPCVIEVQGVRVGLLICEDAW-HPEPARAAAQAGAQLLAVINASPFH 191 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R + + LP++Y + VGGQDE++FDG SF Q + + + Sbjct: 192 EGKQAEREATLAARACETGLPLVYAHLVGGQDEIVFDGCSFAV--QADGSIAARAPAFAE 249 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + A ++P A ++A VL++RDYV KN F ++GLS Sbjct: 250 ALPRVEVRTGGHALVLAGEVIAQPGHLP-----ALWSALVLAVRDYVGKNRFPGALLGLS 304 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG + V T+M+P YT+ S DA A+ +G +YD + I Sbjct: 305 GGIDSALVLAIAVDALGADKVHTVMMPSPYTADISWIDARDMAERVGVRYDEISIAPQFE 364 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ EN+Q+RIRG +LM LSN +++LTT NKSE+S GY TLYG Sbjct: 365 AFKAALAPAFASRAEDTTEENLQARIRGTLLMGLSNKFGSVVLTTGNKSEMSTGYCTLYG 424 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 DM+GGF +KD+ KT+VF LA WRN++ +GL P IP I+ + PSAELRP Q D Sbjct: 425 DMAGGFAVIKDVLKTEVFALARWRNANDPFGTGLDP----IPDRIITRPPSAELRPDQKD 480 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y +LD I++R +EN ES + + Y V V L+ +EYKRRQAPVG ++ Sbjct: 481 QDSLPAYEVLDAIVRRYMENNESIASIVADGYASADVERVTRLIQINEYKRRQAPVGPRL 540 Query: 539 TAKSFGRDRLYPISNKFR 556 T +SFG+D YPI+N+FR Sbjct: 541 TRRSFGKDWRYPITNRFR 558 >gi|30249848|ref|NP_841918.1| carbon-nitrogen hydrolase:NAD+ synthase [Nitrosomonas europaea ATCC 19718] gi|30180885|emb|CAD85807.1| Carbon-nitrogen hydrolase:NAD+ synthase [Nitrosomonas europaea ATCC 19718] Length = 535 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/557 (39%), Positives = 321/557 (57%), Gaps = 26/557 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+N GD+ GN K A +A G DL++ E+ + GY ED + ++ F+Q Sbjct: 1 MKIALAQINCTPGDLRGNQLKILHACRQAREAGADLVITPEMSLCGYLAEDWLLRREFVQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L + +D ++VG P + N+V + G ++A K +L + Sbjct: 61 ACHQALTELTAQVYD--VTLIVGHPHNMNGNLFNAVSAVRDGRLLATHCKQHLFSDRLQD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F +G S I G++ D ++++ + L GA+ L +++ASPY + Sbjct: 119 ERRYFSAGNSLCTFECSGILFGLMTGSD-YRHAAHLQSLHAAGAQVLLAVDASPYSIDSQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R++I+ I+ LP +Y+N VGGQDEL+FDGASF D +L Q+ F E + Sbjct: 178 IDRYQILREGITQTGLPAVYINPVGGQDELVFDGASFAMDHSGKLVCQLPAFQEALALIA 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 H +Q + D A ++Y L+ L L D++ KN V+IGLSGG+D Sbjct: 238 IHGNQSIFGECSTLPDQAGSIYTALR----------LGLHDFITKNRLPGVLIGLSGGVD 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG E V+T+M+P YT+ S++DA A LG ++ +PI L + F Sbjct: 288 SALVLAIAVDALGAERVRTVMMPSPYTADISIQDAQTMADNLGVRHAGIPITGLFDQFQQ 347 Query: 365 LMSQFLQ---EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + LQ + + EN+Q+RIRG +LMAL+N S ++L TSNKSE +VGY TLYGD Sbjct: 348 ALQAELQACSDSGTSATVENLQARIRGTLLMALANQSGMLVLPTSNKSETAVGYSTLYGD 407 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF+ LKD+ KT V++L +RN ++ +IP IL++ PSAELRP Q DQ+ Sbjct: 408 MAGGFSILKDVSKTLVYRLCHYRNQ---------ISPIIPQRILQRPPSAELRPGQIDQD 458 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LD II+ VEN+ S Y +ETVR V +++ SEYKRRQA G +IT Sbjct: 459 SLPPYDVLDAIIEAYVENDLSAAEIIAMNYPEETVRRVLRMIHSSEYKRRQAAPGIRITR 518 Query: 541 KSFGRDRLYPISNKFRD 557 + FGR +P+++ F D Sbjct: 519 RDFGRSWRFPLTSGFPD 535 >gi|170701246|ref|ZP_02892214.1| NAD+ synthetase [Burkholderia ambifaria IOP40-10] gi|170133839|gb|EDT02199.1| NAD+ synthetase [Burkholderia ambifaria IOP40-10] Length = 576 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 233/594 (39%), Positives = 335/594 (56%), Gaps = 58/594 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACS-----------------------------SAIDTLKSDTH----DGGAG--IVVGF 88 A + A L+ D H DG A I G Sbjct: 62 AAAAAALDTLADALRPFDGLAVLVGHPLRGPGRGAGSELRDDAHAPAVDGNANRPIERGV 121 Query: 89 PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLG 146 P D N+V ++ G I K +LPN F EKR F + +P+VF ++ G Sbjct: 122 PPAD---TYNAVSLIVGGEIAGTYRKQDLPNADVFDEKRYFAT--DAEPLVFELNGVKFG 176 Query: 147 ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 ++ICED W +++ + K GA+ L N SPY+ NK R + + +I LP++YVN Sbjct: 177 VIICEDAW-HASAAQIAKAAGAQVLLIPNGSPYHMNKEALRIDTLRARIRETGLPMVYVN 235 Query: 207 QVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 VGGQDEL+FDG SF D Q L +M F E + + E+ + L A Sbjct: 236 LVGGQDELVFDGGSFVLDAQGALVAKMPQFDEGHAIVEFDGARPLP--------GAVAPA 287 Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 +P+ + Y A V +RDYV KN F V+IGLSGG+DSAL A+A DALG E V+ +M+ Sbjct: 288 LPVDAQV--YRALVTGVRDYVGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMM 345 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +YT+ S DAA A+ +G +YD + I + + F + ++ ENIQ+RI Sbjct: 346 PSRYTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALADEFAGRAEDATEENIQARI 405 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V+QL +RN+ Sbjct: 406 RGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYQLCRYRNA 465 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN- 505 ++ G L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 466 ---SADYG-LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEI 521 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 522 VAAGYAEADVARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 575 >gi|297243357|ref|ZP_06927290.1| NAD synthase [Gardnerella vaginalis AMD] gi|296888604|gb|EFH27343.1| NAD synthase [Gardnerella vaginalis AMD] Length = 565 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 219/576 (38%), Positives = 318/576 (55%), Gaps = 37/576 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A+AQ++ VG+I N+ K + A + G +++F E+ ++GYP EDL + +F Sbjct: 4 LRLALAQIDTCVGNIDSNVEKVLKYAARAKQSGARMVVFPEMTLTGYPIEDLALRATFRT 63 Query: 65 ACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPN 119 A A D L S + G G +VVG D+ N +++L G + DK LPN Sbjct: 64 AAQKAADLLASKLSEEGLGELYVVVGTVGFDESAGKPRNRLLVLHEGKSVLQYDKHFLPN 123 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F E R F SG + + IRLG ICEDIW++ L K G + L ++N SPY Sbjct: 124 YGVFDEFRIFSSGNKCELLEVDGIRLGFAICEDIWQDGGPVARLAKLGIDALITMNGSPY 183 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R + + V+ P++YVNQVGGQD+L+FDG SF D L + F+E Sbjct: 184 EEGKTHVRLSLAQKRAVEVNAPVVYVNQVGGQDDLVFDGGSFVVDSDGTLLERSAMFAED 243 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ N + S++ L +E Y ACV+ LRDY++KN F V +GL Sbjct: 244 LSFVDFD--------NSLKKQKVSSIAPKLDADEEVYCACVVGLRDYMRKNGFKGVCLGL 295 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL A +A DA G NV I +P Y+S S +DA A+ +G YDV PI L Sbjct: 296 SGGIDSALVATMAADACGGANVYGISMPSMYSSDGSKDDARDLAERIGAHYDVQPIEPLF 355 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F S +S G+ AEN+Q+R+RG I+MA SN + L T NKSE++ GY T+Y Sbjct: 356 KAFQSQLSL------EGVAAENLQARVRGVIVMAYSNSRGVLALATGNKSELACGYSTIY 409 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRN---SHGITSGLGPLTE--------------VIPP 462 GD GG+ P+KDL KT+V+ L+ WRN + G+ G+ P+ +IP Sbjct: 410 GDAVGGYAPIKDLLKTRVWALSRWRNRAANAGVGIGMLPIVGYEDSQKAKAPQDGVLIPV 469 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHL 521 + + K PSAELRP Q D +SLP Y +LD +++ +E + + +++ TV V L Sbjct: 470 NSIIKPPSAELRPGQKDSDSLPEYDLLDRVLEAHIELAHGRADLLADGFDEHTVDTVMRL 529 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + +E+KRRQ P+G K++A +FGRDR P++ FR+ Sbjct: 530 VDRAEWKRRQYPLGPKVSAIAFGRDRRMPVTTAFRE 565 >gi|307151612|ref|YP_003886996.1| NAD+ synthetase [Cyanothece sp. PCC 7822] gi|306981840|gb|ADN13721.1| NAD+ synthetase [Cyanothece sp. PCC 7822] Length = 561 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 229/577 (39%), Positives = 327/577 (56%), Gaps = 44/577 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP VGD+ N A +A QG+ L+L EL + GYPP+DL+ SF+ Sbjct: 1 MKIAIAQLNPTVGDLWSNANNILEAAHQAASQGVRLLLTPELSLCGYPPKDLLLNPSFVH 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLP 118 + S ++ L A G V D G + NS+ +LD G + + K LP Sbjct: 61 SLSVELENLAEKIPPQLAVLVGTVEANTDADSRGEKPLYNSIALLDEGKVKQIFHKRLLP 120 Query: 119 NYSEFHEKRTFISGY-SNDPIVFRD------IRLGILICEDIWKNS----------NICK 161 Y F E R F G SN +F +++G+ ICED+W + N + Sbjct: 121 TYDVFDEDRYFEPGRQSNAFTIFPTPESENFVKVGVTICEDLWNDKDFWGKQTYEVNPIE 180 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + +F+ +L+ASPY K K R ++T + H+PI+YVNQVGG D+LIFDG SF Sbjct: 181 DLVQLEVDFVVNLSASPYSVKKQKLRESMLTYSAAKYHVPILYVNQVGGNDDLIFDGNSF 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE-EEAD-YNAC 279 + Q ++ + K + E+ ++Q D + P E EEA+ + A Sbjct: 241 AVNRQGEVFCRAKALETDVKILEFCPEKQ---------DLLAAFIQPFIEIEEAEIFAAL 291 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL L+DY +K F KV++GLSGGIDS+L AAIA +A+GK+NV +++P Y+S S+ DA Sbjct: 292 VLGLKDYARKCGFTKVVLGLSGGIDSSLVAAIAAEAMGKDNVLGVLMPSPYSSDHSITDA 351 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK LG K LPI + + ++ P GI ENIQSRIRGN+LMA++N Sbjct: 352 EALAKNLGIKSYQLPIEPAMKVYDQMLEPLFTGTPFGIAEENIQSRIRGNLLMAIANKFG 411 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+V+ + W N E+ Sbjct: 412 YLLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVYDICQWLNRE---------QEI 462 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP ++L K PSAEL+P Q DQ+SLPPY ILDDI+ R++ +S D Y+ E V+ V Sbjct: 463 IPHNVLIKPPSAELKPDQKDQDSLPPYEILDDILYRMINKHQSIPQIVDAGYDAEVVKKV 522 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QAP G KIT ++FG PI++++ Sbjct: 523 MKLVMRAEFKRKQAPPGLKITDRAFGTGWRMPIASRW 559 >gi|170733752|ref|YP_001765699.1| NAD synthetase [Burkholderia cenocepacia MC0-3] gi|169816994|gb|ACA91577.1| NAD+ synthetase [Burkholderia cenocepacia MC0-3] Length = 572 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 228/590 (38%), Positives = 331/590 (56%), Gaps = 54/590 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QAC-----------------------------SSAIDTLKSDTHDGGAG--IVVGFPRQD 92 A S A D ++ DG A I G P D Sbjct: 62 AAAAAALDALADALKAFDGLAVLVGHPLRGPGSGAGDDARASAVDGNANRPIERGVPPTD 121 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILIC 150 N+V ++ G I+ K +LPN F EKR F + +P+VF ++ G++IC Sbjct: 122 ---TFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFAT--DTEPLVFELNGVKYGVIIC 176 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG 210 ED W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGG Sbjct: 177 EDAW-HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGG 235 Query: 211 QDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ 270 QDEL+FDG SF DG L +M F E + + E+ + L + L Sbjct: 236 QDELVFDGGSFVLDGDGALVAKMPQFDEGHAIVEFDGARPLP----------GAIAPELS 285 Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 + Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P ++ Sbjct: 286 TDAQVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRF 345 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 T+ S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG + Sbjct: 346 TADISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALAGEFAGRAEDATEENIQARIRGTL 405 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 406 LMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATTDY 465 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 + L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 466 A----LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMQMYMEEDRPLAEIVAAG 521 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 522 YAQADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 571 >gi|284044933|ref|YP_003395273.1| NAD+ synthetase [Conexibacter woesei DSM 14684] gi|283949154|gb|ADB51898.1| NAD+ synthetase [Conexibacter woesei DSM 14684] Length = 587 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 220/586 (37%), Positives = 329/586 (56%), Gaps = 44/586 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A+ Q+N VGDIAGN K A Q +L+LF EL ++GYPPEDL+ K+ F+Q Sbjct: 11 LRLALCQMNATVGDIAGNERKISDGIAAARGQQAELVLFPELALTGYPPEDLLLKEHFLQ 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+D L ++TH G +VGFP +D + V N++ +L G + + K LPNY F Sbjct: 71 DTRRALDRLAAETH--GIVALVGFPERDDD-VYNALAVLADGAVQGIYRKNYLPNYGVFD 127 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F +G I ++++G+ ICEDIW+ GA + +L+ASPY+ K Sbjct: 128 EQRYFATGDGGALIEVGEVKIGLTICEDIWEPGAPASDEAYAGASVIVNLSASPYHAGKA 187 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ----- 239 +R ++ + + + VGGQDEL+FDG S D + ++ + F+E+ Sbjct: 188 VERERMLIQRARDSMCVVAFCGLVGGQDELVFDGHSLVVDHRGEVIARAGQFTEELLVAT 247 Query: 240 -NFMTEWHYDQQLSQWNYMSDDSASTMYI----------------------PLQEEEAD- 275 + + Y + ++ D+ I PL E A+ Sbjct: 248 VDPLAPRTYRLRDARHRAAGRDARPVPTIARLELPETPADDEHPLTRGPIAPLLEPTAEV 307 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A V LRDYV+KN F +V++GLSGG+DSAL A +AVDALG + V ++P Y+S ++ Sbjct: 308 YTALVCGLRDYVRKNGFDRVVLGLSGGVDSALVACVAVDALGPDGVAVAVMPSPYSSQET 367 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 DA A LG + I + + S ++ + EN+Q+RIRGN+LMALS Sbjct: 368 QADARQLADNLGVERYEFNIQPAMRAYASTLADTFAGRKPDLTEENLQARIRGNLLMALS 427 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI-TSGLG 454 N ++L T NKSE+SVGY TLYGD++GGF +KD K +V++L +R++ T+G Sbjct: 428 NKFGWLVLATGNKSEMSVGYSTLYGDLAGGFAVIKDCPKLRVYELTRYRDALARETTG-- 485 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EY 510 E++P I+++ PSAELRP Q D++SLPPY +LD I+ VE + + DQ + Sbjct: 486 --RELVPAMIIDRPPSAELRPDQKDEDSLPPYAVLDPILDGYVEQD---LGRDQLILRGF 540 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ V V L+ +EYKRRQAP G KIT+++FGRDR PI+NK+R Sbjct: 541 REQDVDKVIALVDRAEYKRRQAPPGIKITSRAFGRDRRVPITNKYR 586 >gi|71897931|ref|ZP_00680136.1| NAD+ synthase [Xylella fastidiosa Ann-1] gi|71732175|gb|EAO34230.1| NAD+ synthase [Xylella fastidiosa Ann-1] Length = 545 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 226/570 (39%), Positives = 319/570 (55%), Gaps = 40/570 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N + E+A + G D+++F EL +SGYPPEDL+ + Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNAERITALIEQARDEHGADVVMFPELALSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C AI+ + + TH G VVG+P+ V N +L G + K LPN Sbjct: 61 PGFLAHCQVAIERIAAATH--GIVAVVGWPQSAGSVVYNVASVLCDGQVEQTYRKRELPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F + VF+ + +G+LICED+W + + + GAE + NAS Sbjct: 119 YAVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLWFSEPLADTVCG-GAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ FS Sbjct: 178 PYERGKHAQRDALLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAAAFS 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEADYNACVL-----SLRDYVQK 289 +Q + +YM + ++PLQ E E NA V ++DY +K Sbjct: 238 DQWLVV-----------DYMRSER---RFVPLQWVAESEVSINALVWRAVVRGVQDYCRK 283 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N F KV +GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + Sbjct: 284 NGFSKVWVGLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVR 343 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + + I + + + EN+QSR RG ILMAL+N +LLTT NKS Sbjct: 344 LETVAIEPVFEGLLAALGPLFAGMAPDAAEENLQSRSRGVILMALANKFGGLLLTTGNKS 403 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E +VGY T+YGDM GG+ PLKD+YK+QVF+LA WRN ++ L IPP ++ + P Sbjct: 404 EYAVGYATIYGDMCGGYAPLKDIYKSQVFELAQWRNR--VSDVLA-----IPPGVIHRPP 456 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSE 526 SAELR QTDQ+SLPPY +LD I+ V+ ++S D Y V YV +L+ SE Sbjct: 457 SAELRAQQTDQDSLPPYEVLDGILSLYVDQDQS--REDIIAAGYAAGVVDYVLNLVRISE 514 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +KR QA G K++ ++FGR+R YPISN +R Sbjct: 515 WKRHQAAPGPKVSQRAFGRERRYPISNAYR 544 >gi|296159039|ref|ZP_06841866.1| NAD+ synthetase [Burkholderia sp. Ch1-1] gi|295890600|gb|EFG70391.1| NAD+ synthetase [Burkholderia sp. Ch1-1] Length = 566 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 230/582 (39%), Positives = 333/582 (57%), Gaps = 44/582 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQ+N VGD AGN+ K A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQINVTVGDFAGNVEKIVAAARAAHNDGAKLLIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQD----------------QEGV-----LNSVV 101 A ++A+ L + G ++VG P +D + GV N+ Sbjct: 62 AASAAALADLAAQLKPFTGLHVIVGHPLRDVTHTAAHGHGNANAPIERGVPPVDTFNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G + K +LPN F EKR F S P VF ++ G++ICED W +++ Sbjct: 122 LIVDGEVRGTYRKQDLPNTEVFDEKRYFAS--DPQPFVFELDGVKYGVVICEDAW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ + N SPY+ NK R +I+ +I LP++YVN VG QDEL+FDG Sbjct: 179 AQMAKAAGAQVVLIPNGSPYHLNKEVVRFDILRARIRETGLPMVYVNMVGAQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNA 278 SF D Q +L +M F E + E+ + L T P L E Y A Sbjct: 239 SFVLDAQGELVAKMAQFEEATAIVEFENGKPLR-----------TAIAPDLSIEAQVYAA 287 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 V+ +RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S D Sbjct: 288 LVMGVRDYINKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAVMMPSRYTADISTTD 347 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 AA A+ +G +YD + I + + F +++ ENIQ+RIRG +LMALSN Sbjct: 348 AAEMARRVGVRYDEIAIAPMFDAFRGSLAEEFAGRAEDATEENIQARIRGTLLMALSNKF 407 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 A++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN T G + Sbjct: 408 GAIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRN-QATTFG---KQD 463 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRY 517 VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Y E V+ Sbjct: 464 VIPERILTRAPSAELRENQTDQDSLPPYEVLDAIMRMYMEEDRSLAEIIAAGYAVEDVKR 523 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 524 VTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPV 565 >gi|297617738|ref|YP_003702897.1| NAD+ synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145575|gb|ADI02332.1| NAD+ synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 549 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 220/566 (38%), Positives = 318/566 (56%), Gaps = 38/566 (6%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 + +AQLNPVVGDI GN+ K + + G+DL++F ELFI+GYPP DL+ K F++ Sbjct: 3 VGLAQLNPVVGDIEGNLKKIEDTLAQYSPCGVDLLIFPELFITGYPPRDLLEKPWFLKKV 62 Query: 67 SSAIDTLKS-DTHDGGAGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ L+ G GI++G P G+ N +++ G I K LP Y Sbjct: 63 EKSVTRLRQLSLRYPGTGILIGLPVPTDGTVGRGLYNGAILIYQGREIGRTAKTLLPIYD 122 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI-----------CKHLKKQGAEF 170 F E+R F + + F+ LG+ ICED W + + + L KQGA Sbjct: 123 VFDEERYFDPAPRVETVPFKGEVLGVSICEDAWNDPELWPSRRMYSFDPIEALAKQGATL 182 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +++ASP+ K + R+ ++ ++P IYVNQVGG DEL+FDG S F+ + +L Sbjct: 183 LVNISASPFTVGKEEIRYRLIRNHARRHNIPFIYVNQVGGNDELVFDGRSMAFNRRGELL 242 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + F E+ + + +++ + Y S D +++ A VL RDY++K Sbjct: 243 YLGAPFKEEIGIIDT--EKETDTFLYSSQDRIQSVF----------EALVLGTRDYLKKC 290 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F K +IGLSGGIDSA+ IAV+ALG+ENV I +P Y+S S+ D+ A LG ++ Sbjct: 291 GFKKAVIGLSGGIDSAVTCCIAVEALGRENVLGISMPSPYSSAGSVTDSQKLASNLGIQF 350 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 V+PI + + ++ FL+ I EN+Q+RIRGNILMA +N ++L+T NKSE Sbjct: 351 LVIPITQVFESYLTIFDGFLEGRRLDIAEENLQARIRGNILMAFANRFGYLVLSTGNKSE 410 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDMSGG + L D+ KT V+ LA + N E+IP I+ K+PS Sbjct: 411 LAVGYCTLYGDMSGGLSVLADVPKTMVYDLAGYINRS---------KEIIPLEIIHKAPS 461 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKR 529 AELRP QTDQ++LPPYP+LD I+ VE Q DE TV+ V + SEYKR Sbjct: 462 AELRPGQTDQDTLPPYPLLDQILYLYVEENLGVEEIVQLGLDEDTVKKVVRSVNASEYKR 521 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKF 555 RQA G K+T+K+FG R PI+ + Sbjct: 522 RQAAPGLKVTSKAFGMGRRMPIAARI 547 >gi|218245153|ref|YP_002370524.1| NAD synthetase [Cyanothece sp. PCC 8801] gi|218165631|gb|ACK64368.1| NAD+ synthetase [Cyanothece sp. PCC 8801] Length = 561 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 220/576 (38%), Positives = 330/576 (57%), Gaps = 41/576 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GD+A N K A + A Q L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQLNPIIGDLANNAQKINDAAQFAASQNARLLLTPELSLCGYPPRDLLLNPSFVK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINL 117 + S ++ L A ++VG + + + NSV L+ G I + K L Sbjct: 61 SLSLELEQLSKKIPPQLA-VLVGTVTANTDAYIKGEKPLFNSVAWLENGQIKQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRD------IRLGILICEDIWKNS----------NICK 161 PNY F E R F G ++ D +++G+ ICED+W + N Sbjct: 120 PNYDVFDEARYFEPGRQSNYFQLTDFESSEILKIGVTICEDLWNDQEFWGQKYYEHNPLA 179 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L G + + +L+ASPY K K R +++ +PI+Y NQ+GG D+LIFDG SF Sbjct: 180 DLIDFGVDLIVNLSASPYTVGKQKIREKMIKYSSQRYQIPIVYTNQIGGNDDLIFDGNSF 239 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL 281 + Q ++A ++K F E + + +D + + S + +T+ EEE + A VL Sbjct: 240 VVNRQGKIALRLKGFEENIQVVD--FDLKAKDFCSSSLNDHTTI-----EEEEIWLALVL 292 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 L+DY +K F K ++GLSGGIDS+L AAIA +ALGK+NV +++P ++S S+ DA A Sbjct: 293 GLKDYAKKCGFSKAVLGLSGGIDSSLVAAIATEALGKDNVLGLLMPSPFSSEHSITDAEA 352 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 K LG PI D++N + +L+ GI EN+QSRIRGN+LMA++N + Sbjct: 353 LVKNLGINSYKFPIEDVMNSYDTLLHPLFLGTEFGIAEENLQSRIRGNLLMAIANKFGYL 412 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H TEVIP Sbjct: 413 LLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFSLCQWLNRH---------TEVIP 463 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 ++L K PSAEL+P+Q DQ+SLPPY ILD+I+ R++ +S +D ++ + + Sbjct: 464 HNVLIKPPSAELKPNQVDQDSLPPYDILDEILDRLIHRHQSVSQIHDAGFDLAVINKILK 523 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KR+QAP G K+T ++FG PI+++++ Sbjct: 524 LVIRAEFKRKQAPPGLKVTDRAFGTGWRMPIASRWK 559 >gi|171319130|ref|ZP_02908251.1| NAD+ synthetase [Burkholderia ambifaria MEX-5] gi|171095650|gb|EDT40609.1| NAD+ synthetase [Burkholderia ambifaria MEX-5] Length = 572 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 232/587 (39%), Positives = 337/587 (57%), Gaps = 48/587 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP----------------------RQDQEGV---- 96 A ++A+D L G ++VG P R + GV Sbjct: 62 AAAAAALDALADALRPFDGLAVLVGHPLRGPGSDPGDDACAPAVDGNANRPIERGVPPAD 121 Query: 97 -LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDI 153 N+V ++ G I K +LPN F EKR F + P+VF ++ G++ICED Sbjct: 122 TYNAVSLIVGGEIAGTYRKQDLPNADVFDEKRYFAT--DAQPLVFELNGVKFGVIICEDA 179 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDE Sbjct: 180 W-HASAAQIAKAAGAQVLLIPNGSPYHMNKEALRIDILRARIRETGLPMVYVNLVGGQDE 238 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEE 273 L+FDG SF D Q L +M F E + + E+ L A +P+ + Sbjct: 239 LVFDGGSFVLDAQGALVAKMPQFDEGHAIVEFDGAHPLP--------GAVAPALPVDAQV 290 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ Sbjct: 291 --YRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTAD 348 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMA Sbjct: 349 ISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALADEFAGRAEDATEENIQARIRGTLLMA 408 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ T+ Sbjct: 409 LSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNA---TADY 465 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYND 512 G L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + Sbjct: 466 G-LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAE 524 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 ADVARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 571 >gi|91782435|ref|YP_557641.1| NAD synthetase [Burkholderia xenovorans LB400] gi|91686389|gb|ABE29589.1| DNA-directed RNA polymerase, subunit H [Burkholderia xenovorans LB400] Length = 562 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 228/577 (39%), Positives = 334/577 (57%), Gaps = 38/577 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQINVTVGDFAGNVAKIVAAARAAHNDGAKLLIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQD------------QEGV-----LNSVVILDA 105 A ++A+ L G ++VG P +D + GV N+ ++ Sbjct: 62 AASAAALADLALQLKPFAGLHVIVGHPFRDAAHGHGNANAPIERGVPPVDTFNAASLIVD 121 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHL 163 G + K +LPN F EKR F + P VF ++ G++ICED W +++ + Sbjct: 122 GEVRGTYRKQDLPNTEVFDEKRYFAA--DPQPFVFELDGVKYGVVICEDAW-HASAAQMA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ + N SPY+ NK R +I+ +I LP++YVN VG QDEL+FDG SF Sbjct: 179 KAAGAQVVLIPNGSPYHLNKEAVRFDILRARIRETGLPMVYVNMVGAQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 D + +L +M F E + E+ + L + + L E Y A V+ + Sbjct: 239 DAEGELVAKMAQFEEATAIVEFENGKPLH----------TAIAPDLSIEAQVYAALVMGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S DAA A Sbjct: 289 RDYINKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAVMMPSRYTADISTTDAAEMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F S ++Q ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRSSLAQEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN T G +VIP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRN-QATTFG---KQDVIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Y E V+ V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYEVLDAIMRMYMEEDRSLAEIIAAGYAVEDVKRVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 525 KINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPV 561 >gi|170730173|ref|YP_001775606.1| NAD synthetase [Xylella fastidiosa M12] gi|167964966|gb|ACA11976.1| NAD(+) synthase (glutamine-hydrolyzing) [Xylella fastidiosa M12] Length = 545 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 226/570 (39%), Positives = 320/570 (56%), Gaps = 40/570 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N+ + E+A + G D+++F EL +SGYPPEDL+ + Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNVERIIALIEQARDEHGADVVMFPELALSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C AI+ + + TH A VVG+P+ V N +L G + K LPN Sbjct: 61 PGFLAHCQVAIERIAAATHSIVA--VVGWPQSAGSVVYNVASVLCDGQVEQTYRKRELPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y F E+R F + VF+ + +G+LICED+W + + + GAE + NAS Sbjct: 119 YGVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLWFSEPLADTVCG-GAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ FS Sbjct: 178 PYERGKHAQRDVLLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAAAFS 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEADYNACVL-----SLRDYVQK 289 +Q + +YM + ++PLQ E E NA V ++DY +K Sbjct: 238 DQWLVV-----------DYMRSER---RFVPLQWVAESEVSINALVWRAVVRGVQDYCRK 283 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N F KV +GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + Sbjct: 284 NGFSKVWVGLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVR 343 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + + I + + + EN+QSR RG ILMAL+N +LLTT NKS Sbjct: 344 LETVAIEPVFEGLLAALGPLFAGMSPDATEENLQSRSRGVILMALANKFGGLLLTTGNKS 403 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E +VGY T+YGDM GG+ PLKD+YK+QVF+LA WRN+ ++ L IPP ++ + P Sbjct: 404 EYAVGYATIYGDMCGGYAPLKDIYKSQVFELAQWRNT--VSDVLA-----IPPGVIHRPP 456 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSE 526 SAELR QTDQ+SLPPY +LD I+ V+ E+S D Y V YV +L+ +E Sbjct: 457 SAELRAQQTDQDSLPPYEVLDGILSLYVDQEQS--REDIIAAGYTAGVVDYVLNLVRINE 514 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +KR QA G K++ ++FGR+R YPISN +R Sbjct: 515 WKRHQAAPGPKVSQRAFGRERRYPISNAYR 544 >gi|206560956|ref|YP_002231721.1| NAD synthetase [Burkholderia cenocepacia J2315] gi|198036998|emb|CAR52919.1| putative glutamine-dependent NAD synthase [Burkholderia cenocepacia J2315] Length = 572 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 230/587 (39%), Positives = 337/587 (57%), Gaps = 48/587 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP----------------------RQDQEGV---- 96 A ++A+D L G ++VG P R + GV Sbjct: 62 AAAAAALDALADALKAFDGLAVLVGHPLRGAGSGAGSGPGASAVDGNANRPIERGVPPTD 121 Query: 97 -LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDI 153 N+V ++ G I+ K +LPN F EKR F + +P+VF ++ G++ICED Sbjct: 122 TFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFAT--DTEPLVFELNGVKYGVIICEDA 179 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDE Sbjct: 180 W-HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGGQDE 238 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEE 273 L+FDG SF DG L +M F E + + E+ + L + L + Sbjct: 239 LVFDGGSFVLDGAGALVAKMPQFDEGHAIVEFDGARPLP----------GAIAPELSTDA 288 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P ++T+ Sbjct: 289 QVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRFTAD 348 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMA Sbjct: 349 ISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALAGEFAGRAEDATEENIQARIRGTLLMA 408 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ T+ Sbjct: 409 LSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNA---TADY 465 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYND 512 G L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 466 G-LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQ 524 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 ADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 571 >gi|71275844|ref|ZP_00652128.1| NAD+ synthase [Xylella fastidiosa Dixon] gi|71899340|ref|ZP_00681500.1| NAD+ synthase [Xylella fastidiosa Ann-1] gi|71163422|gb|EAO13140.1| NAD+ synthase [Xylella fastidiosa Dixon] gi|71730854|gb|EAO32925.1| NAD+ synthase [Xylella fastidiosa Ann-1] Length = 545 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 226/570 (39%), Positives = 320/570 (56%), Gaps = 40/570 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N+ + E+A + G D+++F EL +SGYPPEDL+ + Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNVERIIALIEQARDEHGADVVMFPELALSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C AI+ + + TH A VVG+P+ V N +L G + K LPN Sbjct: 61 PGFLAHCQVAIERIAAATHSIVA--VVGWPQSAGSVVYNVASVLCDGQVEQTYRKRELPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y F E+R F + VF+ + +G+LICED+W + + + GAE + NAS Sbjct: 119 YGVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLWFSEPLADTVCG-GAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ FS Sbjct: 178 PYERGKHAQRDVLLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAAAFS 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEADYNACVL-----SLRDYVQK 289 +Q + +YM + ++PLQ E E NA V ++DY +K Sbjct: 238 DQWLVV-----------DYMRSER---RFVPLQWVAESEVSINALVWRAVVRGVQDYCRK 283 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N F KV +GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + Sbjct: 284 NGFSKVWVGLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVR 343 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + + I + + + EN+QSR RG ILMAL+N +LLTT NKS Sbjct: 344 LETVAIEPVFEGLLAALGPLFAGMSPDATEENLQSRSRGVILMALANKFGGLLLTTGNKS 403 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E +VGY T+YGDM GG+ PLKD+YK+QVF+LA WRN+ ++ L IPP ++ + P Sbjct: 404 EYAVGYATIYGDMCGGYAPLKDIYKSQVFELAQWRNT--VSDVLA-----IPPGVIHRPP 456 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSE 526 SAELR QTDQ+SLPPY +LD I+ V+ E+S D Y V YV +L+ +E Sbjct: 457 SAELRAQQTDQDSLPPYEVLDGILSLYVDQEQS--REDIIAAGYAAGVVDYVLNLVRINE 514 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +KR QA G K++ ++FGR+R YPISN +R Sbjct: 515 WKRHQAAPGPKVSQRAFGRERRYPISNAYR 544 >gi|171059646|ref|YP_001791995.1| NAD+ synthetase [Leptothrix cholodnii SP-6] gi|170777091|gb|ACB35230.1| NAD+ synthetase [Leptothrix cholodnii SP-6] Length = 577 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 228/572 (39%), Positives = 318/572 (55%), Gaps = 45/572 (7%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS-SAI 70 +NP VGD+AGN+ + A A+ QG + + EL + GYPPEDL+ + +F+ AC + Sbjct: 23 INPTVGDLAGNLRRIVEAARAAHAQGASVAVAPELALCGYPPEDLLLRPAFLAACEQALA 82 Query: 71 DTLKSDTHDGGAGIVVGFPR---------------QDQ------EGVLNSVVILDAGNII 109 D + G +V+G PR D+ +G LN +L G +I Sbjct: 83 DCAAALADLAGFHLVLGHPRALSTLAAAGGSDVRTHDRSRSWALQGCLNMASVLSGGRVI 142 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSN--DPIVFRDI--RLGILICEDIWKNSNICKHLKK 165 A K LPNY F E+R F+SG D +VF R G+LICED W + Sbjct: 143 ASYAKRELPNYQVFDERRYFVSGRDAGLDALVFEAAGRRFGVLICEDAWFDEPAAAARAA 202 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 A+ L LNASP++ K ++R + + + H LP++Y + VG QDE++FDGASF Sbjct: 203 G-AQVLLVLNASPFHLGKQEEREQRMAERARHAGLPLLYSHLVGAQDEVVFDGASFALQA 261 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 +LA + F+E M +S + +P E +A + A +RD Sbjct: 262 DGRLAARAPMFAEHTLMLTLDAAGAVS---------GACAELPSLEAQA-WGALTTGVRD 311 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y+ KN F IIGLSGGIDSAL AIAVDA+G + + +M+P YT+ S DA A+ Sbjct: 312 YLGKNGFPGAIIGLSGGIDSALVLAIAVDAIGADKIHCVMMPSPYTAEISWVDARDMAQR 371 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG +YD L I + + F + ++ + ENIQ+RIRG +LMALSN +++LTT Sbjct: 372 LGVRYDELSIVPMFDAFRATLAGQFEGRAEDTTEENIQARIRGTLLMALSNKFGSIVLTT 431 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++ GY TLYGDM+GG+ +KD+ KT V++LA WRN GP+ EVIP I+ Sbjct: 432 GNKSEMATGYCTLYGDMAGGYAVIKDVAKTLVYRLAQWRNRQ------GPI-EVIPERII 484 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYG 524 + PSAELRP QTDQ+SLPPY +LD I+ +E + S + V V L+ Sbjct: 485 TRPPSAELRPDQTDQDSLPPYEVLDAILSMYMEEDRSIEQIVAAGFAPADVERVTRLIKL 544 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +EYKRRQAPVG +IT + FGRD YPI++KFR Sbjct: 545 NEYKRRQAPVGLRITHRGFGRDWRYPITSKFR 576 >gi|194366934|ref|YP_002029544.1| NAD synthetase [Stenotrophomonas maltophilia R551-3] gi|194349738|gb|ACF52861.1| NAD+ synthetase [Stenotrophomonas maltophilia R551-3] Length = 544 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 219/562 (38%), Positives = 316/562 (56%), Gaps = 26/562 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 + ++IA+AQ + VGD+AGN I +AR+E G +L++F EL +SGYPPEDL+ Sbjct: 1 MASIRIAMAQFDFPVGDVAGNTERIIEMIGQARDE---YGAELVMFPELAVSGYPPEDLL 57 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + G VVG+P+ V N+ +L G + K L Sbjct: 58 LRPGFLYECEQAMTRIATACR--GITAVVGWPQAAGAVVYNAASVLRDGLVEQTYRKREL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 PNY+ F E+R F VF I +G+LICED+W + ++ +GA+ + N Sbjct: 116 PNYAVFDERRYFDVDPDGGSCVFEVNGIPVGLLICEDLWFAEPLADTVR-EGAQLVVVPN 174 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 175 ASPYERGKHAQRDAVLAARTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAA 234 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F +Q + E+ + + + DD +M + + A ++DY +KN F KV Sbjct: 235 FVDQWLVVEYDGETRRFLPHVWMDDGDESM------DALAWRAVTRGIQDYCRKNGFKKV 288 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSA+ A+AVDA+G ENV + LP +YT+ S + AA +ALG K + + I Sbjct: 289 WLGLSGGIDSAIVLAMAVDAMGAENVTAVRLPSRYTAGLSNDLAAEQCQALGVKLEAVSI 348 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 ++ + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY Sbjct: 349 EPAFKGLMESLAPMFEGTTPDVTEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAVGY 408 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T+YGDM GG+ PLKDLYKT+VF L+ WRN T G P VIPP+++ + PSAELR Sbjct: 409 ATIYGDMCGGYAPLKDLYKTEVFGLSKWRN----TVGGAP---VIPPAVISRPPSAELRE 461 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 +Q DQ+SLP Y +LD I+ R ++ E+S Y+ V V L+ SE+KR QA Sbjct: 462 NQLDQDSLPAYDVLDGILYRYIDQEQSRTEIVAAGYDAAVVDRVLRLVRISEWKRHQAAP 521 Query: 535 GTKITAKSFGRDRLYPISNKFR 556 G K++ ++FGR+R YPISN ++ Sbjct: 522 GPKVSRRAFGRERRYPISNGYK 543 >gi|254521078|ref|ZP_05133133.1| NAD(+) synthase [Stenotrophomonas sp. SKA14] gi|219718669|gb|EED37194.1| NAD(+) synthase [Stenotrophomonas sp. SKA14] Length = 544 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 223/567 (39%), Positives = 318/567 (56%), Gaps = 36/567 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 + ++IA+AQ + VGD+AGN I +AR+E G +L++F EL +SGYPPEDL+ Sbjct: 1 MASIRIAMAQFDFPVGDVAGNTERIIEMIGQARDE---YGAELVMFPELAVSGYPPEDLL 57 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + F+ C A+ + + G VVG+P+ V N+ +L G + K L Sbjct: 58 LRPGFLYECEQAMGRIAAACR--GITAVVGWPQAAGAVVYNAASVLRDGLVEQTYRKREL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 PNY+ F E+R F VF + +G+LICED+W + ++ GA+ + N Sbjct: 116 PNYAVFDERRYFDVDPDGGSCVFEVNGVPVGLLICEDLWFAEPLADTVRA-GAQLVVVPN 174 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + H Sbjct: 175 ASPYERGKHAQRDAVLAARTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTV-----H 229 Query: 236 FSEQNFMTEW---HYDQQLSQW--NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + F+ +W YD Q ++ + DD +M + + A ++DY +KN Sbjct: 230 PAAAAFVDQWLVVDYDGQSRRFLPHVWMDDGDESM------DALAWRAVTRGIQDYCRKN 283 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F KV +GLSGGIDSAL A+AVDA+G ENV + LP +YT+ S + AA +ALG K Sbjct: 284 GFKKVWLGLSGGIDSALVLAMAVDAMGAENVTAVRLPSRYTAGLSNDLAAEQCQALGVKL 343 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 D + I ++ + + EN+QSR RG ILMAL+N +LLTT NKSE Sbjct: 344 DAVSIEPAFKGLMESLAPMFEGTTPDVTEENLQSRSRGVILMALANKFGGLLLTTGNKSE 403 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +VGY T+YGDM GG+ PLKDLYKT+VF L+ WRN T G P VIPP+++ + PS Sbjct: 404 YAVGYATIYGDMCGGYAPLKDLYKTEVFGLSKWRN----TVGGAP---VIPPAVISRPPS 456 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELR +Q DQ+SLP Y +LD I+ R ++ E+S Y+ V V L+ SE+KR Sbjct: 457 AELRENQLDQDSLPAYDVLDGILYRYIDQEQSRGEIVAAGYDAAVVDRVLRLVRISEWKR 516 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFR 556 QA G K++ ++FGR+R YPISN ++ Sbjct: 517 HQAAPGPKVSRRAFGRERRYPISNGYK 543 >gi|270157431|ref|ZP_06186088.1| glutamine-dependent NAD(+) synthetase [Legionella longbeachae D-4968] gi|289164176|ref|YP_003454314.1| glutamine dependent NAD+ synthetase [Legionella longbeachae NSW150] gi|269989456|gb|EEZ95710.1| glutamine-dependent NAD(+) synthetase [Legionella longbeachae D-4968] gi|288857349|emb|CBJ11177.1| glutamine dependent NAD+ synthetase [Legionella longbeachae NSW150] Length = 535 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 231/563 (41%), Positives = 321/563 (57%), Gaps = 33/563 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL + +AQ+NP VG + N K + + + D+I+F EL ++GYPPEDL+F+K Sbjct: 1 MQNKLTVLMAQINPTVGALTSNRDKIIEIIK-SQQLNHDIIIFPELALTGYPPEDLLFRK 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q + + +++ T D +++G P Q+++ NSV I G A K LPNY Sbjct: 60 EFQQKVNENLHLIQTITED--CHVLIGHPSQEKQHRYNSVSIFYQGQKAAEYHKQILPNY 117 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + F E R F G N I+ ++G++ICED+W+ + L + G L LNASP+ Sbjct: 118 AIFDEVRYFNPGKKNPCILEINHYKVGVIICEDLWQ-PGPAEDLIEHGISVLLVLNASPF 176 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 ++K KR E + + + IIYVNQVGGQDEL+FDG S D Q +++ + F E Sbjct: 177 DYSKYPKR-EALLRSYAKRGISIIYVNQVGGQDELLFDGQSIAIDSQGRISARGTAFQEN 235 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIG 298 E +Q + PL E EA Y A V RDYV KN F V++G Sbjct: 236 LSTVEIQGNQ------------IKGLVSPLLENEALLYEALVCGTRDYVNKNQFPGVLVG 283 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AIAVDALG + +++P +YT+ S EDA K L + +L I Sbjct: 284 LSGGIDSALTLAIAVDALGADRAHAVLMPSRYTAQMSNEDALIQIKHLQVSHSILSIESA 343 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + + + ENIQ+RIRG ++MALSN + M+L+TSNKSE +VGY TL Sbjct: 344 FEALIATLEPLFRGLTPDTTEENIQARIRGLLIMALSNKTGKMVLSTSNKSESAVGYATL 403 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGF LKD+ KTQV+ LA +RNS ++ VIP +L ++PSAELRP QT Sbjct: 404 YGDMAGGFAVLKDVLKTQVYALARYRNS---------ISTVIPERVLTRAPSAELRPDQT 454 Query: 479 DQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 DQ+SLP Y LD II +E + E I Q + ETV V L+ +EYKRRQ+P G Sbjct: 455 DQDSLPEYAELDAIIVGYMEQNLSPEEIIQ--QGFAPETVAKVIQLIKHNEYKRRQSPPG 512 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 KI+ ++FG+D YPI+N F++ Sbjct: 513 IKISPRAFGKDWRYPITNGFKNQ 535 >gi|115352508|ref|YP_774347.1| NAD synthetase [Burkholderia ambifaria AMMD] gi|115282496|gb|ABI88013.1| DNA-directed RNA polymerase, subunit H [Burkholderia ambifaria AMMD] Length = 576 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 230/594 (38%), Positives = 334/594 (56%), Gaps = 58/594 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFY 61 Query: 64 Q---------------------------------ACSSAIDTLKSDTHDGGAG--IVVGF 88 A S + D ++ DG A I G Sbjct: 62 AAAAAALDTLADALRPFDGLAVLVGHPLRGPGSGAGSDSGDDARAPAVDGNANRPIERGV 121 Query: 89 PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLG 146 P D N+V ++ G I K +LPN F EKR F + +P+VF ++ G Sbjct: 122 PPAD---TYNAVSLIVGGEIAGTYRKQDLPNADVFDEKRYFAT--DAEPLVFELNGVKFG 176 Query: 147 ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 ++ICED W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN Sbjct: 177 VIICEDAW-HASAAQIAKAAGAQVLLVPNGSPYHMNKDALRIDILRARIRETGLPMVYVN 235 Query: 207 QVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 VGGQDEL+FDG SF D Q L +M F E + + E+ + L A Sbjct: 236 LVGGQDELVFDGGSFVLDAQGALVAKMPQFDEGHAIVEFDGARPLP--------GAIAPA 287 Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 +P+ + Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+ Sbjct: 288 LPIDAQV--YRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGLERVRAVMM 345 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +YT+ S DAA A+ +G +YD + I + + F + ++ ENIQ+RI Sbjct: 346 PSRYTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALADEFAGRAEDATEENIQARI 405 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 406 RGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNA 465 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN- 505 T+ G +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 466 ---TADYGQ-RDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEI 521 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 522 VAAGYAEADVARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 575 >gi|296123511|ref|YP_003631289.1| NAD+ synthetase [Planctomyces limnophilus DSM 3776] gi|296015851|gb|ADG69090.1| NAD+ synthetase [Planctomyces limnophilus DSM 3776] Length = 554 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 215/569 (37%), Positives = 321/569 (56%), Gaps = 40/569 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q NP VGD+AGN + A A G DL++ +EL +SGYPP+DL+ ++ F+ Sbjct: 1 MKIALLQTNPTVGDLAGNARLVQEAAHMAASSGADLLVTSELVLSGYPPKDLLSRQGFVA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ---DQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 AC +D L + G+VVG P Q Q + N+ ++ G ++A K LPNY Sbjct: 61 ACDRWVDQLAGELPKE-LGVVVGHPTQRDCPQGRIANAASLIHEGKVLATIHKRLLPNYD 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-------------SNICKHLKKQGA 168 F E+R F PI FR +LGI ICED W + + L KQGA Sbjct: 120 VFDERRYFRPAQKLAPIPFRGEKLGIHICEDAWFHDPATFYATDPELLGDPVAELGKQGA 179 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +L+ASP+ K ++RHE++ H +P ++ +Q+GG D+L+FDG SF D Sbjct: 180 TLLINLSASPFEVGKSRRRHELMAYHARHWSIPFLFADQIGGNDDLVFDGQSFVLDANGS 239 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 + F D Q +S + +P++ + + A VL +RDY Sbjct: 240 CVATLPAFRRGLLQV----DTQALPPRQIS------LQMPVESDL--HEAMVLGIRDYCH 287 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K+ F ++GLSGG+DSAL A +A ALG E+V ++LP +Y++ SLEDA A+ L Sbjct: 288 KSGFTDCVLGLSGGVDSALVAYLAARALGPEHVHGLLLPSRYSTDHSLEDAILLAERLKI 347 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 + +PI D V+ + +++ +E +P+G+ +N+QSRIRG I+MA SNH + L T Sbjct: 348 DHCTIPI-DAVHRAYEMIAVLGEELASKPAGLADQNLQSRIRGAIVMARSNHHGWLALAT 406 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE+++GY TLYGDM+G PL DLYK +V++L + N G E+IP +IL Sbjct: 407 GNKSELAMGYCTLYGDMNGALAPLSDLYKGEVYRLCEFINQQ---EG----KEIIPANIL 459 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGS 525 K PSAEL P+Q DQ++LPPY +LDDI++ +++ EES ++ TV +V L + Sbjct: 460 TKPPSAELAPNQFDQDTLPPYDMLDDILRGLIDREESVAALSDKFPATTVEWVARRLDRN 519 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNK 554 EYKR Q P G K++ ++FG R P++ + Sbjct: 520 EYKRWQMPPGIKVSPRAFGVGRRMPMAAR 548 >gi|325981539|ref|YP_004293941.1| NAD+ synthetase [Nitrosomonas sp. AL212] gi|325531058|gb|ADZ25779.1| NAD+ synthetase [Nitrosomonas sp. AL212] Length = 543 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 226/561 (40%), Positives = 319/561 (56%), Gaps = 33/561 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IAIAQ+N VGDIAGN AK A ++A + G LI+ EL +SGYPP DL+ +++F Q Sbjct: 1 MYIAIAQINCTVGDIAGNAAKILAAVKQAQQAGATLIITPELALSGYPPADLLLRETFCQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + L D ++VG P D+ + N+ I+ G I K L F+ Sbjct: 61 LCQQTLTQLAQSVDD--ITLIVGHPSFDENKLYNAASIIHKGQIQHTYHKRILNKSPFFN 118 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E F +G P +F I+ GI IC D W ++ + + + LNAS Y+ N Sbjct: 119 ETYYFDAG--TQPYLFELEGIKFGIDICADFWLG-HLPAETDQPQPDIVLVLNASAYHIN 175 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R++ I H +P+I+ N +GGQDEL+FDGASF +GQ +L Q+ F+E + Sbjct: 176 KQVSRYQTTHQFIKHTGIPVIHTNLIGGQDELVFDGASFAMNGQGELTHQLSEFAEAIEL 235 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSG 301 E Q + +P Q A Y A L +RDYV+KN F V++GLSG Sbjct: 236 IEIQNKQPVK-----------GKLMPAQSPVASIYQALCLGVRDYVRKNAFPGVLLGLSG 284 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 G+DSAL AIAVDALG + ++T+M+P +YT+ SLEDA A+ LG K+ I L + Sbjct: 285 GVDSALALAIAVDALGADQIRTVMMPTRYTASMSLEDANEMAELLGVKHIECDIESLFDL 344 Query: 362 FFSLMSQFLQEEPS----GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + +++ P + ENIQ+RIRG +LMALSN++ +M+LTT NKSE++VGY T Sbjct: 345 YLKKIAEDFHISPDLADFNTMPENIQARIRGTLLMALSNYTGSMVLTTGNKSEMAVGYCT 404 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF LKD+ KT V+QL +RN + VIP I+ ++PSAELR +Q Sbjct: 405 LYGDMTGGFAVLKDISKTLVYQLCEYRNQ---------IQRVIPERIIHRAPSAELRLNQ 455 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGT 536 TDQ++LP Y +LD II+ VE + + DE V V L++ +EYKRRQ+P G Sbjct: 456 TDQDNLPAYEVLDGIIEAYVEKNLTPAEIIALHYDEVDVAKVIQLIHSNEYKRRQSPPGI 515 Query: 537 KITAKSFGRDRLYPISNKFRD 557 +IT FG YPI + F++ Sbjct: 516 RITHCDFGTAWRYPIVSHFKN 536 >gi|269794840|ref|YP_003314295.1| NAD+ synthetase [Sanguibacter keddieii DSM 10542] gi|269097025|gb|ACZ21461.1| NAD+ synthetase [Sanguibacter keddieii DSM 10542] Length = 553 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 214/567 (37%), Positives = 316/567 (55%), Gaps = 34/567 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ++ VGD+ N A +G ++ F E+ I+GYP EDL + SF + Sbjct: 4 IRIALAQIDTCVGDVDTNSRTILEWSRRAAAEGAQVVAFPEMTITGYPIEDLALRASFQR 63 Query: 65 ACSSAIDTLKSDTHDGGAGIV------VGFPR--QDQEGV--LNSVVILDAGNIIAVRDK 114 A +A+ T+ G G + VG P+ + G N ++L G + A DK Sbjct: 64 AARAAVQTIADQLVADGLGDLTVVLGTVGAPQVTRTSPGTRPTNQALVLQGGAVTASYDK 123 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 +LPNY F E R F G + + R+G+++CEDIW++ L Q + L L Sbjct: 124 HHLPNYGVFDEFRIFAPGAEPCVLEIQGRRVGLVVCEDIWQDGGPVAELAAQEVDLLLVL 183 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 N SP+ K R ++ + + P+ YVN VGGQD+L+FDG SF + Sbjct: 184 NGSPFEEGKGHSRTDLAVRRARELRAPVAYVNMVGGQDDLVFDGGSFVVGEDGSVLTSAP 243 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSD---DSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F E L W+ +D + + PL +E Y A V +R YV+KN Sbjct: 244 QFVE-----------HLLVWDLAADGEPEHRGPIAPPLDPDEEVYQAIVTGVRGYVRKNG 292 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F V++GLSGGIDSAL AAI DA+G +NV + +P Y+S S +DA AK +G Y Sbjct: 293 FRSVVLGLSGGIDSALVAAICADAIGGDNVYGVSMPSTYSSEHSKDDALDLAKRIGAHYR 352 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V PI +V+ F + LQ+ + AEN+Q+R+RG ILM LSN ++L T NKSE+ Sbjct: 353 VQPIAPMVDAFQGELD--LQD----VAAENLQARVRGMILMGLSNSEGHLVLATGNKSEL 406 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGD GGF P+KD+ K+QV+ L+ WRN+ + +G P IP S + K PSA Sbjct: 407 AVGYSTIYGDAVGGFAPIKDVDKSQVWALSRWRNNVALDAGQIP---PIPESSITKPPSA 463 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRR 530 ELRP Q DQ+SLPPY +LD+++ +E+ E + +++E V V L+ +E+KRR Sbjct: 464 ELRPGQVDQDSLPPYDLLDEVLDAYIEHAEGRAELLARGFDEEVVDKVVSLVDRAEWKRR 523 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFRD 557 Q P+G K+TA +FGRDR P+++++R+ Sbjct: 524 QYPLGPKVTALAFGRDRRLPVTSRWRE 550 >gi|257058179|ref|YP_003136067.1| NAD synthetase [Cyanothece sp. PCC 8802] gi|256588345|gb|ACU99231.1| NAD+ synthetase [Cyanothece sp. PCC 8802] Length = 561 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 220/576 (38%), Positives = 330/576 (57%), Gaps = 41/576 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GD+A N K A + A Q L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQLNPIIGDLANNAQKINDAAQFAASQNARLLLTPELSLCGYPPRDLLLNPSFVK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINL 117 + S ++ L A ++VG + + + NSV L+ G I + K L Sbjct: 61 SLSLELEQLSKKIPPQLA-VLVGTVTANTDAYIKGEKPLFNSVAWLENGQIKQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRD------IRLGILICEDIWKNS----------NICK 161 PNY F E R F G ++ D +++G+ ICED+W + N Sbjct: 120 PNYDVFDEARYFEPGRQSNYFQLTDFESSEILKIGVTICEDLWNDQEFWGQKYYEHNPLA 179 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L G + + +L+ASPY K K R +++ +PI+Y NQ+GG D+LIFDG SF Sbjct: 180 DLIDFGVDLIVNLSASPYTVGKQKIREKMIKYSSQRYQIPIVYTNQIGGNDDLIFDGNSF 239 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL 281 + Q ++A ++K F E + + +D + + S + +T+ EEE + A VL Sbjct: 240 VVNRQGKIALRLKGFEENIQVVD--FDLKAKDFCSSSLNDHTTI-----EEEEIWLALVL 292 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 L+DY +K F K ++GLSGGIDS+L AAIA +ALGK+NV +++P ++S S+ DA A Sbjct: 293 GLKDYGKKCGFSKAVLGLSGGIDSSLVAAIATEALGKDNVLGLLMPSPFSSEHSITDAEA 352 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 K LG PI D++N + +L+ GI EN+QSRIRGN+LMA++N + Sbjct: 353 LVKNLGINSYKFPIEDVMNSYDTLLHPLFLGTEFGIAEENLQSRIRGNLLMAIANKFGYL 412 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H TEVIP Sbjct: 413 LLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFSLCQWLNRH---------TEVIP 463 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 ++L K PSAEL+P+Q DQ+SLPPY ILD+I+ R++ +S +D ++ + + Sbjct: 464 HNVLIKPPSAELKPNQVDQDSLPPYDILDEILDRLIHRHQSVSQIHDAGFDLAVINKILK 523 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KR+QAP G K+T ++FG PI+++++ Sbjct: 524 LVIRAEFKRKQAPPGLKVTDRAFGTGWRMPIASRWK 559 >gi|152967241|ref|YP_001363025.1| NAD+ synthetase [Kineococcus radiotolerans SRS30216] gi|151361758|gb|ABS04761.1| NAD+ synthetase [Kineococcus radiotolerans SRS30216] Length = 599 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 220/589 (37%), Positives = 316/589 (53%), Gaps = 45/589 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ++ VGD+ GN+A A + G L+LF E ++GYP EDL + S Sbjct: 1 MPQLRVAMAQVDTTVGDLDGNVAVILDWTRRAAQDGAHLVLFPETAVTGYPVEDLALRTS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------------PRQDQEGVLNSVVILD 104 F+ A A+ L D G G +VVG+ PR+ + N +L Sbjct: 61 FVDASRRAVGRLARRLADDGFGDVTVVVGYVDRVGEDARPGAGGPRRLPQ---NCAAVLH 117 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G ++A K +LPNY F E R F+ G + R + + + ICED+W++ + Sbjct: 118 GGRVVARYAKHHLPNYGVFDEYRIFVPGDDLLVVRVRGVDVAVAICEDLWQDGGPVQMAG 177 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA L LNASPY +K R E+V + + PI YVN VGGQDEL+FDG S Sbjct: 178 DAGAGLLAVLNASPYERDKDDVRLELVARRAAEAGCPIAYVNAVGGQDELVFDGDSLVVA 237 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS---------------DDSASTMYIPL 269 + + F E +T+ ++ + + AS + PL Sbjct: 238 AGGTVLARGPQFREALVVTDLDLPAGVTTPGWEEHVQRVTVTAEAVPAYEPRASEVLQPL 297 Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 + + A VL LRDYV+KN F V++ +SGGIDSAL A++A DA+G ENV I LP Sbjct: 298 PDVAEVHGALVLGLRDYVRKNGFRSVVVAVSGGIDSALVASLACDAIGPENVLGISLPSG 357 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 Y+S S +DA A G +Y PI +V F + G+ EN+Q+R+RG Sbjct: 358 YSSQHSRDDAEDLANRCGFEYRQYPIAPMVEAFLGTVPL------RGVAEENLQARVRGT 411 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +M ++N + L TSNKSE++VGY TLYGD GG+ PLKD+ KT V++L+ WRN+ + Sbjct: 412 TIMGIANQEGHLTLATSNKSELAVGYSTLYGDSVGGYAPLKDVPKTLVWELSRWRNAEAL 471 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE 509 + G P IP + + K PSAELRP QTDQ+SLPPY +LD I++ VE + + Sbjct: 472 SRGEQP---PIPENTITKPPSAELRPDQTDQDSLPPYEVLDAILEDYVEGDRGRAEMLEA 528 Query: 510 YNDET-VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D T V V L+ +E+KRRQ G KI+ K+FGRDR PI+N++R+ Sbjct: 529 GFDATVVDSVVTLVDRAEWKRRQFAPGPKISYKAFGRDRRLPITNRWRE 577 >gi|319786171|ref|YP_004145646.1| NAD+ synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317464683|gb|ADV26415.1| NAD+ synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 545 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 228/567 (40%), Positives = 314/567 (55%), Gaps = 36/567 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAK-ARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M L+IA+AQ + VG + N + A E + G D++LF EL ISGYPPEDL+ + Sbjct: 1 MKDSLRIALAQFDFPVGAVEANAGRIAEMIAEARDEYGADIVLFPELAISGYPPEDLLMR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 SF+ C A++ + + H G VVG+P + N+ +L G I A K LPN Sbjct: 61 PSFLARCQQALEQVAAGVH--GITAVVGWPESAGSVLYNAASVLRDGRIEATYRKRELPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILI--CEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F + +P VF + + + CED+W + +K GA+ + NAS Sbjct: 119 YAVFDERRYFEADPDGEPCVFEVGGVPVGVVVCEDLWFPEPMADTVKA-GAQLVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 P+ K +R ++ + + Y+N VGGQD L+FDGAS DG + F+ Sbjct: 178 PFERGKHAQRDALLAERTRETGAAVAYLNVVGGQDSLVFDGASVVADGNGTVHPAAAAFT 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ-----EEEAD---YNACVLSLRDYVQK 289 +Q W + D+A + P+Q +E D + A V +RDY K Sbjct: 238 DQ--------------WLVVDYDTAGRSFTPVQWMDDGDESMDALAWRAVVRGIRDYCGK 283 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N F + +GLSGGIDSAL A+A +ALG ENV + LP +YT+ S + AA ALG + Sbjct: 284 NGFRRAWLGLSGGIDSALVLALAAEALGPENVVAVRLPSRYTAGLSNDLAAEQCAALGVR 343 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + +PI F + Q + + EN+QSR RG ILMALSN +LLTT NKS Sbjct: 344 LETIPIEPAFTGFLQSLEQVFAGQEADTTEENLQSRSRGAILMALSNKFGGLLLTTGNKS 403 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN T G P VIPP+++ + P Sbjct: 404 EYAVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRN----TVGGAP---VIPPAVISRPP 456 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELR Q DQ+SLPPY +LD I+ R V+ E+S Y E V V L+ SE+K Sbjct: 457 SAELRADQLDQDSLPPYDVLDGILYRFVDQEQSRGEIVAAGYAAEVVDRVLRLVRTSEWK 516 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R+QA G K++ ++FGR+R YPISN F Sbjct: 517 RQQAAPGPKVSRRAFGRERRYPISNGF 543 >gi|283783349|ref|YP_003374103.1| NAD+ synthetase [Gardnerella vaginalis 409-05] gi|298252710|ref|ZP_06976504.1| NAD synthase [Gardnerella vaginalis 5-1] gi|283441963|gb|ADB14429.1| NAD+ synthetase [Gardnerella vaginalis 409-05] gi|297533074|gb|EFH71958.1| NAD synthase [Gardnerella vaginalis 5-1] Length = 570 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 219/581 (37%), Positives = 320/581 (55%), Gaps = 42/581 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A+AQ++ VG+I N+ K + A + G +++F E+ ++GYP EDL + +F Sbjct: 4 LRLALAQIDTCVGNIDSNVEKVLKYAARAKQSGARMVVFPEMTLTGYPIEDLALRATFRT 63 Query: 65 ACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPN 119 A D L + + G G +VVG D+ N +++L G + DK LPN Sbjct: 64 TAQKAADLLATKLAEEGLGELYVVVGTVGFDESAGKPRNRLLVLHEGKSVLQYDKHFLPN 123 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F E R F SG + + +RLG ICEDIW++ L K G + L ++N SPY Sbjct: 124 YGVFDEFRIFSSGNKCELLEVDGMRLGFAICEDIWQDGGPVARLAKLGIDALITMNGSPY 183 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R + + V+ P++YVNQVGGQD+L+FDG SF D L + F E Sbjct: 184 EEGKTHVRLSLAQKRAVEVNAPVVYVNQVGGQDDLVFDGGSFVVDADGTLLERSAMFDED 243 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ N + S++ L +E Y ACV+ LRDY++KN F V +GL Sbjct: 244 LSFVDFD--------NSLKKQKVSSIAPKLDADEEVYCACVVGLRDYMRKNGFKGVCLGL 295 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL A +A DA G NV I +P Y+S S +DA A+ +G YDV PI L Sbjct: 296 SGGIDSALVATMAADACGGANVYGISMPSMYSSDGSKDDARDLAERIGAHYDVQPIEPLF 355 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F S +S G+ AEN+Q+R+RG I+MA SN + L T NKSE++ GY T+Y Sbjct: 356 KAFQSQLSL------EGVAAENLQARVRGVIVMAYSNSRGVLALATGNKSELACGYSTIY 409 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRN---SHGITSGLGPL--------TEV--------- 459 GD GG+ P+KDL+KT+V+ L+ WRN + G+ G+ P+ TEV Sbjct: 410 GDAVGGYAPIKDLFKTRVWALSRWRNRAANAGVGIGMLPIVGYEDSEQTEVTKAKAPQDG 469 Query: 460 --IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVR 516 IP + + K PSAELRP Q D +SLP Y +LD +++ +E + ++ +++ TV Sbjct: 470 VLIPVNSIIKPPSAELRPGQKDSDSLPEYDLLDRVLEAHIELAHGRADLLEDGFDEHTVD 529 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K++A +FGRDR P++ FR+ Sbjct: 530 TVMRLVDRAEWKRRQYPLGPKVSAIAFGRDRRMPVTTAFRE 570 >gi|218437297|ref|YP_002375626.1| NAD synthetase [Cyanothece sp. PCC 7424] gi|218170025|gb|ACK68758.1| NAD+ synthetase [Cyanothece sp. PCC 7424] Length = 560 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 223/577 (38%), Positives = 326/577 (56%), Gaps = 44/577 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP+VGDI GN A + A QG L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQLNPIVGDIEGNAKTILEAAQTAFNQGARLLLTPELSLCGYPPRDLLLNPSFVK 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLP 118 + S ++ L A G V P G + NS+ L+ I + K LP Sbjct: 61 SMSIELEKLAQQIPPELAVLVGTVDLNPNAASRGEKPLYNSIAFLEQNQIQQIFHKRLLP 120 Query: 119 NYSEFHEKRTFISGYSN-------DPIVFRDIRLGILICEDIWKNSNI----------CK 161 Y F E R F SG + P +++G+ ICED+W + + Sbjct: 121 TYDVFDEDRYFESGRESHAFKIFPSPQASNFVKVGVTICEDLWNDEEFWGKRNYEASPIE 180 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + +F+ +L+ASPY NK K R ++ ++ +PIIY NQVGG D+LIFDG SF Sbjct: 181 DLAQLEVDFVVNLSASPYSVNKQKLRESMLLHSVTKYKVPIIYNNQVGGNDDLIFDGNSF 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL 281 ++ Q ++ + K F + ++ ++Q +++ A+ +P +EE ++A VL Sbjct: 241 AYNRQGEICCRAKSFETDLILLDFSEEKQ----DFLP---ATIHPLPKTQEEEIFSALVL 293 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 L+DY K F KV++GLSGGIDS+L A IAV A+GK+NV +++P Y+S S+ DA A Sbjct: 294 GLKDYAYKCGFTKVVLGLSGGIDSSLVATIAVKAMGKDNVLGVLMPSPYSSEHSITDAEA 353 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 K L K LPI + + ++ SGI ENIQSRIRGN+LMA++N + Sbjct: 354 LVKNLEIKSYQLPIAPAMKVYDQILDPLFAGTQSGIAEENIQSRIRGNLLMAIANKFGYL 413 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF + W N H E+IP Sbjct: 414 LLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTEVFSICHWLNRH---------EEIIP 464 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES---FINNDQEYNDETVRYV 518 +L K PSAEL+P Q DQ+SLPPY ILDDI+ R++ + +S +N + +TV+ V Sbjct: 465 HHVLIKPPSAELKPGQLDQDSLPPYEILDDILARMIHHHQSISEIVNTGHDL--DTVKKV 522 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ +E+KR+QAP G KIT ++FG PI++++ Sbjct: 523 MKMVMRAEFKRKQAPPGLKITDRAFGTGWRMPIASRW 559 >gi|187923115|ref|YP_001894757.1| NAD+ synthetase [Burkholderia phytofirmans PsJN] gi|187714309|gb|ACD15533.1| NAD+ synthetase [Burkholderia phytofirmans PsJN] Length = 566 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 226/582 (38%), Positives = 333/582 (57%), Gaps = 44/582 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQINVTVGDFAGNVAKIVAAARAAHNDGAKLLIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQD----------------QEGV-----LNSVV 101 A ++A+ L + G ++VG P +D + GV N+ Sbjct: 62 AASAAALTDLATQLKPFAGLHVIVGHPLRDVTHNAAHGHGNANAPIERGVPPVDTFNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G + K +LPN F EKR F S P VF ++ G++ICED W +++ Sbjct: 122 LIVGGEVRGTYRKQDLPNTEVFDEKRYFAS--DPQPFVFELDGVKYGVVICEDAW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ + N SPY+ NK R +I+ +I LP++YVN VG QDEL+FDG Sbjct: 179 AQMAKAAGAQVVLIPNGSPYHLNKEAVRFDILRARIRETGLPMVYVNMVGAQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNA 278 SF D + +L +M F E + E+ + L P Q EA Y A Sbjct: 239 SFVLDARGELVAKMAQFEEATAIVEFEDGKPLP-----------APIAPEQSIEAQVYAA 287 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 V+ +RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S D Sbjct: 288 LVMGVRDYINKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAVMMPSRYTADISTTD 347 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 AA A+ +G +YD + I + + F S +++ ENIQ+RIRG +LMALSN Sbjct: 348 AADMARRVGVRYDEIAIAPMFDAFRSSLAEEFAGRAEDATEENIQARIRGTLLMALSNKF 407 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN + + Sbjct: 408 GSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNQATTFAK----QD 463 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRY 517 VIP IL ++PSAELR +QTDQ+SLP Y +LD I++ +E + S Y + V+ Sbjct: 464 VIPERILTRAPSAELRENQTDQDSLPEYDVLDAIMRMYMEEDRSLAEIIAAGYAVDDVKR 523 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 524 VTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPV 565 >gi|295675880|ref|YP_003604404.1| NAD+ synthetase [Burkholderia sp. CCGE1002] gi|295435723|gb|ADG14893.1| NAD+ synthetase [Burkholderia sp. CCGE1002] Length = 570 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 227/586 (38%), Positives = 333/586 (56%), Gaps = 48/586 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQINVTVGDFAGNVAKIVAAARAAHSDGAKLLVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQD--------------------QEGV-----L 97 A ++A+ L + G ++VG P +D + GV Sbjct: 62 TASAAALADLAAQLKPFTGLHVIVGHPLRDGSDNLAHNAANGHGNANAPIERGVPPVDTF 121 Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWK 155 N+ ++ G + K +LPN F EKR F S P VF +R G++ICED W Sbjct: 122 NAASLIVDGEVKGTYRKQDLPNTEVFDEKRYFAS--DPQPFVFELDGLRYGVVICEDAW- 178 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 +++ + K GA+ L N SPY+ NK R +I+ +I +P++YVN VGGQDEL+ Sbjct: 179 HASAAQMAKAAGAQVLLIPNGSPYHLNKEAVRFDILRARIRETGIPMVYVNMVGGQDELV 238 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD 275 FDG SF D Q L ++ F E + E+ + L P Q EA Sbjct: 239 FDGGSFVLDAQGALVAKLAQFEEATAIVEFDDGKPLP-----------AAIAPEQSIEAQ 287 Query: 276 -YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 Y A V+ +RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ Sbjct: 288 VYAALVMGVRDYIGKNGFPGALIGLSGGVDSALVLAVACDALGADKVRAVMMPSRYTADI 347 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 S DAA A+ +G +YD + I + + F +++ ENIQ+RIRG +LMAL Sbjct: 348 STTDAAEMARRVGVRYDEIAIAPMFDAFRGSLAEEFAGRAEDATEENIQARIRGTLLMAL 407 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ + Sbjct: 408 SNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAATTFA--- 464 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDE 513 +VIP IL ++PSAELR +QTDQ+SLP Y +LD I++ +E + S Y + Sbjct: 465 -TRDVIPERILTRAPSAELRENQTDQDSLPEYEVLDAIMRMYMEEDRSLAEIIAAGYRVD 523 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V+ V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 524 DVKRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPV 569 >gi|254247523|ref|ZP_04940844.1| NAD+ synthase [Burkholderia cenocepacia PC184] gi|124872299|gb|EAY64015.1| NAD+ synthase [Burkholderia cenocepacia PC184] Length = 618 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 227/594 (38%), Positives = 331/594 (55%), Gaps = 58/594 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 44 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFY 103 Query: 63 ---------IQACSSAIDTL-----------------------KSDTHDGGAG--IVVGF 88 + A D L ++ DG A I G Sbjct: 104 AAAAAALDALADALKAFDGLAVLVGHPLRGPGSGPGSGAGDDARASAVDGNANRPIERGV 163 Query: 89 PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLG 146 P D N+V ++ G I+ K +LPN F EKR F + +P+VF ++ G Sbjct: 164 PPTD---TFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFAT--DTEPLVFELNGVKYG 218 Query: 147 ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 ++ICED W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN Sbjct: 219 VIICEDAW-HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVN 277 Query: 207 QVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 VGGQDEL+FDG SF DG L +M F E + + E+ + L + Sbjct: 278 LVGGQDELVFDGGSFVLDGDGSLVAKMPQFDEGHAIVEFDGARPLP----------GAIA 327 Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 L + Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+ Sbjct: 328 PELSTDAQVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMM 387 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P ++T+ S DAA A+ +G +YD + I + + F + ++ ENIQ+RI Sbjct: 388 PSRFTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALAGEFAGRAEDATEENIQARI 447 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 448 RGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNA 507 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN- 505 + L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 508 TTDYA----LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEI 563 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 564 VAAGYAQADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 617 >gi|303246918|ref|ZP_07333194.1| NAD+ synthetase [Desulfovibrio fructosovorans JJ] gi|302491625|gb|EFL51508.1| NAD+ synthetase [Desulfovibrio fructosovorans JJ] Length = 580 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 218/595 (36%), Positives = 313/595 (52%), Gaps = 57/595 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++A+ Q+NP VGD+ GN+AK ++A R G DL++F E+ + GYPPEDL+ K Sbjct: 1 MAAFRLALCQINPTVGDVGGNVAKVLAGLDQARRIGADLVVFPEMVVPGYPPEDLLLKSD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC + + G V G P + + ++N+ ++ G I + K LPNY Sbjct: 61 FVDACMAGARRIAGQAR--GLTAVFGCPWFEDD-LVNAAIVAHDGEIAGITAKRYLPNYG 117 Query: 122 EFHEKRTFISG-----YSNDPIVFRDIRLGILICEDIW-KNSNICKHLKKQGAEFLFSLN 175 F E R F +G Y D VF G+ +CEDIW + GA L +++ Sbjct: 118 VFDENRYFATGRGSAVYDRDGFVF-----GVSVCEDIWYPGGPPAEQAHGGGARLLVNIS 172 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASPY+ K R +++ + S + Y N VGGQDEL+FDG S F L + K Sbjct: 173 ASPYHRGKGAGRERMLSTRASDNSAYVAYANMVGGQDELVFDGHSVVFGPDGGLVARGKQ 232 Query: 236 FSEQNFMTEWH---------YDQQLSQWN-------------YMSDDSASTM----YIPL 269 F+E + + D + +W +++D + + PL Sbjct: 233 FAEDMVVCDLDPGQPRRQRLLDPRCRKWEPELEHRPRRISLPHVADAVRAPLDAPAMPPL 292 Query: 270 QEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 ++ A+ Y A VL DYV+K+ F V IGLSGGIDS+L A IA DALG ENV + +P Sbjct: 293 LDDVAEVYEALVLCTGDYVRKSGFGGVCIGLSGGIDSSLTAVIAADALGPENVFGVAMPT 352 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +Y+S SLEDA A+ LG + V+ I ++ F +S + P + EN+Q RIRG Sbjct: 353 RYSSDDSLEDAKELAEKLGITFHVVAIEEIFKAFLGTLSPLFGDRPFDVTEENLQPRIRG 412 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +LMALSN ++LTT NKSE+ VGY TLYGD +GGF+ +KD+ KT V+ L+ WRN Sbjct: 413 TLLMALSNKFGRLVLTTGNKSEVGVGYSTLYGDTAGGFSVIKDVPKTLVYALSRWRNERA 472 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVEN-----EESF 503 T+++P +L K P+AELRP Q D +SLP Y LD ++ VE Sbjct: 473 -------GTDLVPARVLVKPPTAELRPDQKDSDSLPEYDALDPVLAAYVERGLCPAAMKA 525 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 D D R V+ +EYKRRQ+P G KIT ++FG+D PI N++ H Sbjct: 526 AGMDAAVVDRVTRLVDR----NEYKRRQSPPGPKITPRAFGKDWRLPIVNRYDPH 576 >gi|78067208|ref|YP_369977.1| NAD synthetase [Burkholderia sp. 383] gi|77967953|gb|ABB09333.1| DNA-directed RNA polymerase, subunit H [Burkholderia sp. 383] Length = 568 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 228/583 (39%), Positives = 334/583 (57%), Gaps = 44/583 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP------------------RQDQEGV-----LNS 99 A +SA+D L G ++VG P R + GV N+ Sbjct: 62 AAAASALDALADALKAFDGLAVLVGHPLRGAGEGAHAPAVDGNANRPIERGVPPTDTYNA 121 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS 157 V ++ G I+ K +LPN F EKR F + +P+VF ++ G++ICED W ++ Sbjct: 122 VSLIVGGEIVGTYRKQDLPNAEVFDEKRYFAT--DAEPLVFELNGVKYGVIICEDAW-HA 178 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + K GA+ L N SPY+ NK R +I+ +I LP++Y+N VGGQDEL+FD Sbjct: 179 SAAQIAKAAGAQVLLIPNGSPYHMNKEAVRFDILRARIRETGLPMVYINLVGGQDELVFD 238 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYN 277 G SF D Q L +M F E + + E+ + L + L + Y Sbjct: 239 GGSFVLDAQGALVVKMPQFDEGHAIVEFDGARPLP----------GAIAPELSTDAQVYR 288 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A V +RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P ++T+ S Sbjct: 289 ALVTGVRDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRFTADISTT 348 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 DAAEMARRVGVRYDEIAIAPMFDAFRASLASEFAGRAEDATEENIQARIRGTLLMALSNK 408 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN + PL Sbjct: 409 FGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNE----TTAYPLR 464 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVR 516 +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V Sbjct: 465 DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQTDVE 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 RVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 567 >gi|15606275|ref|NP_213654.1| NH(3)-dependent NAD+ synthetase [Aquifex aeolicus VF5] gi|6093465|sp|O67091|NADE_AQUAE RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|2983464|gb|AAC07044.1| NH(3)-dependent NAD+ synthetase [Aquifex aeolicus VF5] Length = 567 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 218/578 (37%), Positives = 330/578 (57%), Gaps = 41/578 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L + +AQLN VGD+ GN K + +E + + +I F EL +SGYPPEDL+ + F++ Sbjct: 2 LNLTLAQLNFTVGDVEGNKEKILKVIDEYSEKS-HIIAFPELSLSGYPPEDLLLQPHFLK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A D + T + + VG P + + + N++ ++ G ++ + K LPNYS F Sbjct: 61 ECEKAFDQIIHHTRNYDVIVAVGLPYYEFD-LYNALAVIHRGEVLGIYKKHFLPNYSVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G I ++ ICEDIW + + GAE + ++NASPY+ NK Sbjct: 120 EYRYFRKGEEPLMIEVNGHKVSFSICEDIWYPDGVERQTALSGAELIVNVNASPYHVNKY 179 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT- 243 + + + + YVN VGGQDEL+FDG S +L + K F E++ +T Sbjct: 180 SFKESFLKSRAEDNLCFVAYVNLVGGQDELVFDGRSIVISPFGKLVARAKAF-EEDILTV 238 Query: 244 ---------EWHYDQQLSQWNYMSDDSASTMYIPLQEEE--------------ADYNACV 280 + D + + +Y + + L ++E Y A Sbjct: 239 TLDLGEAKRKRLLDLRWREGSYGREKVNVKRSVSLPDKEFFRGRIEENPKEEEEIYAALK 298 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 LSLRDYV+KN F KV++GLSGGIDS+ A +AVDALG+ENV+ + +P +++S +S EDA Sbjct: 299 LSLRDYVRKNGFEKVVLGLSGGIDSSFVACLAVDALGRENVKGVYMPSQFSSKESYEDAK 358 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A A+ LG ++ V+PI ++ +F+ + + E + ENIQ+RIR NIL SN + Sbjct: 359 ALAQNLGIEFHVIPIKEIYRAYFNEFEKEICEITFDVADENIQARIRANILFYFSNKFRY 418 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++L+TSNKSE +VGY T+YGDM+GGF P+KD+YKT V++LA +RNS ++ I Sbjct: 419 LVLSTSNKSETAVGYTTIYGDMAGGFAPIKDVYKTWVYKLARYRNS---------ISPDI 469 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRY 517 P + +K PSAELRP+QTDQ+ LPPY ILD I+ +E + E I + + V Sbjct: 470 PERVFKKPPSAELRPNQTDQDVLPPYEILDQILMLYIEENLSPEEIIR--KGLPRDAVYK 527 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +++ +EYKR+QAP+G KIT+++FG+D P++NKF Sbjct: 528 TINMIRKNEYKRKQAPIGPKITSRAFGKDWRMPVTNKF 565 >gi|289548051|ref|YP_003473039.1| NAD+ synthetase [Thermocrinis albus DSM 14484] gi|289181668|gb|ADC88912.1| NAD+ synthetase [Thermocrinis albus DSM 14484] Length = 565 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 215/579 (37%), Positives = 331/579 (57%), Gaps = 45/579 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A+AQ+NP+VGD N ++ + + L++F EL ISGYPPEDL+ + F++ Sbjct: 3 INVALAQINPLVGDPENNTQLIMERWQKVDDKA-HLVVFPELSISGYPPEDLLLRWEFVK 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A++ L + + VVG P + + + N++VIL G ++ + K +LPNYS F Sbjct: 62 GCEKALNKLVEFSKSMKSVCVVGTPYWNGD-LYNALVILQGGKVLGIYRKKHLPNYSVFD 120 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 EKR F G +P++ + LG +CEDIW ++ GA+ L ++NASPY+ Sbjct: 121 EKRYFRGG--EEPLLMEIDGVVLGFSVCEDIWHPDGWERYYATAGADILININASPYHMG 178 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ--- 239 K + + + ++YVN VGGQDEL+FDG S D + + + K F E Sbjct: 179 KYAFKEAFLKARAEDNLCYVVYVNSVGGQDELVFDGRSLVIDPEGNVIARCKAFEEDLKV 238 Query: 240 -----------NFMTEWHYDQQLSQWNYMSDDSASTM-YI------PLQEEEADYNACVL 281 + ++ + ++ T+ Y+ L+ EE Y A VL Sbjct: 239 VSLDVLKGRRRRLVDVRLRERPFVREKPLTHTDGRTLPYVEGTVEHSLEGEEELYRAVVL 298 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 S+++YV+KN F KV++GLSGGIDS+L A +AVDALG+E V + +P +TS +S + Sbjct: 299 SIKEYVEKNGFRKVVVGLSGGIDSSLVACMAVDALGEERVVGVFMPSVFTSEESRQAVYQ 358 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 K L + PI ++N + S+M + + EN+QSRIR NIL LSN + Sbjct: 359 LVKNLRIQLLEFPIEGIMNSYKSMMGW----DDITVAEENLQSRIRANILFYLSNRYGYL 414 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +L+TSNKSE++ GYGT+YGDM+GGF PLKDLYKT V++LA +RN + E IP Sbjct: 415 VLSTSNKSELATGYGTIYGDMAGGFAPLKDLYKTYVYRLAYYRNR---------VKEDIP 465 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYV 518 +L + P+AELRPHQ D+++LPPYP+LD I+ +E + E + + + E V V Sbjct: 466 SFVLTRPPTAELRPHQKDEDTLPPYPVLDKILFHYIEEGLSVEEIVR--RGFERELVCKV 523 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ +EYKR+Q+P+G K+T+++FG+D PI+N +RD Sbjct: 524 VKMIKSAEYKRKQSPLGPKLTSRAFGKDWRVPITNGWRD 562 >gi|172061365|ref|YP_001809017.1| NAD synthetase [Burkholderia ambifaria MC40-6] gi|171993882|gb|ACB64801.1| NAD+ synthetase [Burkholderia ambifaria MC40-6] Length = 576 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 230/591 (38%), Positives = 334/591 (56%), Gaps = 52/591 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFP--------------------------RQDQEGV 96 A ++A+D L G ++VG P R + GV Sbjct: 62 AAAAAALDALADALRPFDGLAVLVGHPLRGPGRGPGSDPGDDARAPAVDGNANRPIERGV 121 Query: 97 -----LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILI 149 N+V ++ G I K +LPN F EKR F + +P+VF ++ G++I Sbjct: 122 PPADTYNAVSLIVGGQIAGTYRKQDLPNADVFDEKRYFAT--DAEPLVFELNGVKFGVII 179 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 CED W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VG Sbjct: 180 CEDAW-HASAAQIAKAAGAQVLLIPNGSPYHMNKEALRIDILRARIRETGLPMVYVNLVG 238 Query: 210 GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL 269 GQDEL+FDG SF D Q L +M F E + + E+ + L A +P+ Sbjct: 239 GQDELVFDGGSFVLDAQGALVAKMPQFDEGHAIVEFDGARPLP--------GAIAAALPV 290 Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 + Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P + Sbjct: 291 DAQV--YRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSR 348 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 YT+ S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG Sbjct: 349 YTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALADEFAGRAEDATEENIQARIRGT 408 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN Sbjct: 409 LLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNETAD 468 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQ 508 L VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 469 YV----LRNVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAA 524 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 GYAEADVARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 575 >gi|209516024|ref|ZP_03264884.1| NAD+ synthetase [Burkholderia sp. H160] gi|209503484|gb|EEA03480.1| NAD+ synthetase [Burkholderia sp. H160] Length = 566 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 226/582 (38%), Positives = 332/582 (57%), Gaps = 44/582 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 2 KTRIALAQINVTVGDFAGNVAKIVAAARAAHSDGAKLLIAPELALSGYPPEDLLLRPAFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQD----------------QEGV-----LNSVV 101 A ++A+ L + G ++VG P +D + GV N+ Sbjct: 62 TASAAALADLAAQLKPFTGLHVIVGHPLRDGSDNLANGHGNANAPIERGVPPVDTFNAAS 121 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI 159 ++ G + K +LPN F EKR F S P VF ++ G++ICED W +++ Sbjct: 122 LIVDGEVKGTYRKQDLPNTEVFDEKRYFAS--DPQPFVFELDGVKYGVVICEDAW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I +P++YVN VGGQDEL+FDG Sbjct: 179 AQMAKAAGAQVLLIPNGSPYHLNKEAVRFDILRARIRETGIPMVYVNMVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNA 278 SF D Q +L ++ F E + E+ L P Q EA Y A Sbjct: 239 SFVLDAQGELVAKLAQFEEATAIVEFDNGTPLP-----------AAIAPEQSIEAQVYAA 287 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 V+ +RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S D Sbjct: 288 LVMGVRDYIGKNGFPGALIGLSGGVDSALVLAVACDALGADKVRAVMMPSRYTADISTTD 347 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 AA A+ +G +YD + I + + F +++ ENIQ+RIRG +LMALSN Sbjct: 348 AAEMARRVGVRYDEIAIAPMFDAFRGSLAEEFAGRAEDATEENIQARIRGTLLMALSNKF 407 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN + + Sbjct: 408 GSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNLATTFA----TRD 463 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRY 517 VIP IL ++PSAELR +QTDQ+SLP Y +LD I++ +E + S Y + V+ Sbjct: 464 VIPERILTRAPSAELRENQTDQDSLPEYEVLDAIMRMYMEEDRSLAEIIAAGYAVDDVKR 523 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 524 VTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPV 565 >gi|332981044|ref|YP_004462485.1| NAD+ synthetase [Mahella australiensis 50-1 BON] gi|332698722|gb|AEE95663.1| NAD+ synthetase [Mahella australiensis 50-1 BON] Length = 548 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 223/571 (39%), Positives = 317/571 (55%), Gaps = 40/571 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQ NP +GDI GNI K +++ G +L++F E+ GYPP+DL+ FI+ Sbjct: 1 MKVAIAQSNPTIGDINGNIDKMIGMIDKSRAAGAELVVFPEMATIGYPPKDLLLNSDFIE 60 Query: 65 ACSSAIDTLK-SDTHDGGAGIVVGFPRQDQ-EGVL-NSVVILDAGNIIAVRDKINLPNYS 121 A + + L +HD GI+ G D G+L NS ++ G+II+ +DK LP Y Sbjct: 61 ALNDLTERLLLPVSHD--IGILFGTVTYDNISGMLCNSALLAYNGDIISRQDKSLLPTYD 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAEFL 171 F E R FI + + F D++LG+ ICEDIW + + + L Q + Sbjct: 119 VFDEARYFIPADTRQCMQFGDLKLGVSICEDIWNDKDFWDRPRYPLDVIAELALQQPDMF 178 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +++ASPY++ K R +++ H PIIY NQVG DELIFDG SFC D A Sbjct: 179 INISASPYHYGKFALRSDMIKNIAKKYHTPIIYANQVGANDELIFDGGSFCIDALGNRAL 238 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 Q K F E + Q+L Q Y S Y P ++ ++A VL +RDY K Sbjct: 239 QAKVFDEDIITID---SQKLMQGTYSS-------YDPNEDIAWMHDALVLGIRDYFHKTG 288 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++ LSGGIDSA+ A+AVDALGK NV + +P +Y+S S +DA AK L ++ Sbjct: 289 CKKTVVALSGGIDSAVVCALAVDALGKRNVLGLSMPSRYSSTGSRDDAYVLAKNLDIEFR 348 Query: 352 VLPIHDLVNHFFSLMSQFLQEEP--SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 PI D+ F + + F + P + ENIQ+RIRGN +M ++N M LTT NKS Sbjct: 349 TYPIEDV---FEACLRTFNGDSPPKGDLAEENIQARIRGNFIMFIANRENRMALTTGNKS 405 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM G P+ D+ KT V++LA + N E+IP S + K+P Sbjct: 406 ELAVGYCTLYGDMCGALAPISDVPKTMVYELARYINRE---------YEIIPESTIAKAP 456 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP Q D++SLPPY +LD I+ +E +SF Y + V+ + H + +E+K Sbjct: 457 SAELRPDQKDEDSLPPYSVLDPILHAYIEENKSFAQIVAMGYEPDLVKDIIHKVDRAEFK 516 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 RRQA G K+T K+FG R PI+ ++ I Sbjct: 517 RRQAAPGLKVTTKAFGIGRRMPIAQRWTGSI 547 >gi|256832713|ref|YP_003161440.1| NAD+ synthetase [Jonesia denitrificans DSM 20603] gi|256686244|gb|ACV09137.1| NAD+ synthetase [Jonesia denitrificans DSM 20603] Length = 553 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 228/572 (39%), Positives = 328/572 (57%), Gaps = 38/572 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + + +AIAQ++ VGDIAGNI K EA RQG DL++F E+ I+GYP EDL + S Sbjct: 1 MTDVTVAIAQIDTCVGDIAGNIDKIVDFAGEAARQGADLVVFPEMTITGYPIEDLALRGS 60 Query: 62 FIQACSSAIDT----LKSDTHD------GGAGIV-----VGFPRQDQEGVLNSVVILDAG 106 F +A + L + H+ G G + V PR N V+L G Sbjct: 61 FQRAAEHGLSVVAKRLVEEGHEHLTVILGTLGSLALSDHVQMPRP-----TNRAVVLSGG 115 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 ++ A DK +LPNY F E R F SG + I R+G+ ICEDIW++ K+L+ + Sbjct: 116 SVTAAYDKHHLPNYGVFDEYRIFASGDTTTVITVGGHRIGLAICEDIWQDGGPVKNLEDE 175 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + L +LN SPY K ++R ++ + + + P++Y NQVGGQD+L+FDG SF Sbjct: 176 NIDLLVTLNGSPYEEGKRQQRIDLAAQRAAALGAPLVYANQVGGQDDLVFDGGSFVVGPS 235 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 + + F E + W L+ + T + L EE Y A V L+ Y Sbjct: 236 GAVLARAPKFEEHLLL--W----TLTDSPHEDHTGDVTEFTDLDEEV--YTALVTGLQGY 287 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+KN F V++GLSGGIDSAL AAIA DALG ENV + +P Y+S S +DAA A+ + Sbjct: 288 VRKNGFTSVVLGLSGGIDSALVAAIAADALGGENVYGVSMPSNYSSQHSQDDAADLAQRI 347 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G Y V I +V+ F S ++ G+ EN+Q+R+RG LMALSN ++L T Sbjct: 348 GAHYRVQHIAPMVDAFQSQLNL------EGVAEENLQARVRGMTLMALSNSEGHLVLATG 401 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NK+E++VGY T+YGD GG+ P+KD+ K++V+QL+ WRN+ + G P IP S + Sbjct: 402 NKTELAVGYSTIYGDAVGGYAPIKDVDKSRVWQLSRWRNTVAVDRGDIP---PIPESSIT 458 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGS 525 K PSAELRP Q DQ+SLPPY +LD ++ +E+EE + + E V V L+ + Sbjct: 459 KPPSAELRPGQVDQDSLPPYDLLDQVLDAHIEHEEGREELLARGFAPEIVDKVVSLVDRA 518 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 E+KRRQ P+G K+TA +FGRDR P+++++R+ Sbjct: 519 EWKRRQYPLGPKVTALAFGRDRRVPVTSRWRE 550 >gi|261337225|ref|ZP_05965109.1| NH3-dependent NAD synthetase [Bifidobacterium gallicum DSM 20093] gi|270277577|gb|EFA23431.1| NH3-dependent NAD synthetase [Bifidobacterium gallicum DSM 20093] Length = 565 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 231/584 (39%), Positives = 328/584 (56%), Gaps = 47/584 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 + L+IA+AQ++ VG++ N +A A+RA + R ++ F E+ ++GYP EDL Sbjct: 1 MSTLRIALAQIDTCVGNLVTNASTVLAYAKRAAADHAR----IVAFPEMTLTGYPIEDLA 56 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEG--VLNSVVILDAGNIIAVR 112 + +F QA L G G +VVG D + N +V+L G ++A Sbjct: 57 LRATFRQAAWDTAADLAQTLQQEGLGDLYVVVGTIGTDHDNGKPRNRLVVLHEGQVVAGY 116 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 DK LPNY F E R F +G + + +R+G+ ICEDIW+ L QG + L Sbjct: 117 DKHFLPNYGVFDEFRIFSAGERSTVLTIDGVRVGVAICEDIWQEGGPVADLAGQGIDLLL 176 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 ++N SPY K R E+ + + V+ PIIY+NQVGGQD+L+FDG SF D L + Sbjct: 177 TINGSPYEEGKGHIRQELAARRAAEVNAPIIYLNQVGGQDDLVFDGGSFVLDTDGTLLER 236 Query: 233 MKHFSEQ-NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F E +F T N + +P +EE Y ACVL L+DY+ KN Sbjct: 237 SPMFMENLSFFT--------LDTNQTRQTPTTIAALPDPDEEV-YTACVLGLKDYMAKNG 287 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F V +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A LG Y+ Sbjct: 288 FTGVTLGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLAHNLGAHYE 347 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V PI L F + Q E G+ AEN+Q+RIRG I+MA SN + L T NKSE+ Sbjct: 348 VQPIEPL---FMAFQDQLHLE---GVSAENLQARIRGVIVMATSNSKNVLALATGNKSEL 401 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN---SHGI-------------TSGLGP 455 + GY T+YGD GG+ P+KDL+KT+V+Q+A WRN + G+ SG+ P Sbjct: 402 ACGYSTIYGDAVGGYAPIKDLFKTKVWQIARWRNKALTQGMGIGGLNVVGNEDGASGIMP 461 Query: 456 LTEV-IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDE 513 + V IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + ++++ Sbjct: 462 ASGVIIPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAAYIEHAHGRADLIADGFDEQ 521 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 TV V L+ +E+KRRQ P+G K++A +FGRDR P++N FR+ Sbjct: 522 TVDTVMRLVDRAEWKRRQYPLGPKVSALAFGRDRRLPVTNAFRE 565 >gi|254415451|ref|ZP_05029211.1| NAD synthase family [Microcoleus chthonoplastes PCC 7420] gi|196177632|gb|EDX72636.1| NAD synthase family [Microcoleus chthonoplastes PCC 7420] Length = 586 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 217/588 (36%), Positives = 323/588 (54%), Gaps = 46/588 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQLNP +GD+ N K A +A RQG+ L+L EL + GYPP DL+ SF++ Sbjct: 1 MKLAIAQLNPTIGDLTSNAQKILDAANQAARQGVRLLLTPELSLCGYPPRDLLLNPSFME 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLP 118 + + +D L A G V P+ + G + NS+ +L+ G I V K LP Sbjct: 61 SMADCLDNLAEQLPSTLAVLVGTVTANPKAESSGGKPLFNSIALLEGGKIQQVFHKRLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFR-----DIRLGILICEDIWKNS----------NICKHL 163 Y F E R F +G ++ I++G+ ICED+W + N L Sbjct: 121 TYDVFDENRYFEAGVQSNSFTLEAESATPIKIGVTICEDLWNDEEFWGKRTYQFNPITDL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 +Q + + +L+ASPY K + R ++ PI+Y NQVGG D+LIFDG+S F Sbjct: 181 NQQNVDLIVNLSASPYSVGKQQLREAMLQHSAKRYQQPILYANQVGGNDDLIFDGSSVGF 240 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVL 281 + ++ + F D L ++ + D + P E ++A VL Sbjct: 241 NRAGEMVCRAPAF---------ETDVLLVDFDPVQGDLLKSAIAPAPESTNAQIWSALVL 291 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 ++DY +K F +V+IGLSGGIDS+L AA+A +ALG+ENV +++P ++S S+ DA A Sbjct: 292 GIQDYARKCGFKRVVIGLSGGIDSSLVAALATEALGRENVLGVLMPSPHSSEHSINDALA 351 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 AK LG K LPI +L+ + + G ENIQ+RIRGN+LMA++N + Sbjct: 352 LAKNLGIKTHTLPIGELMQGYDQTLDPLFAGTEFGTAEENIQARIRGNLLMAIANKFDYL 411 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT---- 457 L++T NKSE++VGY TLYGDM+GG + D+ KT+V+ L W NS + T Sbjct: 412 LISTGNKSEMAVGYCTLYGDMNGGLAAIADVPKTRVYSLCQWLNSTKVKRQESQATPEQL 471 Query: 458 ---------EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-ND 507 E+IP ++L K PSAEL+P QTDQ+SLP Y ILDDI++R++ + +S D Sbjct: 472 PAQLSDTQPEIIPANVLAKPPSAELKPDQTDQDSLPSYDILDDILQRLIHDHQSAPQIID 531 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ E V V ++ +E+KRRQAP G KIT ++FG PI++++ Sbjct: 532 AGHDPEIVHKVMRMVARAEFKRRQAPPGLKITDRAFGTGWRMPIASRW 579 >gi|269127318|ref|YP_003300688.1| NAD+ synthetase [Thermomonospora curvata DSM 43183] gi|268312276|gb|ACY98650.1| NAD+ synthetase [Thermomonospora curvata DSM 43183] Length = 591 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 221/604 (36%), Positives = 318/604 (52%), Gaps = 65/604 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 + +L++A+AQ+NP VGD+ GN + RRA E G L+ F E+ ++GYP EDL Sbjct: 1 MAQLRLALAQVNPTVGDLEGNADLIVEWTRRAAE----AGAHLVAFPEMMLTGYPVEDLA 56 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAG---IVVGF----------PRQDQEGVLNSVVILD 104 + SF++A ++ + D G G +V G+ P + LN++ L Sbjct: 57 LRTSFVEASQRTLEQVARRLADAGLGDLPVVTGYLDRRADAPARPGRPAGAPLNALAWLH 116 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G + K +LPNY F E R F+ G + I + +ICED+W++ + Sbjct: 117 RGRVAVRSAKHHLPNYGVFDEFRYFVPGDRLPAVRVAGIDVAAVICEDLWQDGGPVSVTR 176 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA L +N SPY +K R E+ + + YVN VGGQDEL+FDG S Sbjct: 177 AAGAGLLLVINGSPYERSKDDVRLELAARRAREAGCTLAYVNMVGGQDELVFDGDSMIVG 236 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLS------QWNYMSDDSASTMY--------IPLQ 270 +L + F+E+ + + + S Q +D + T+ +P Sbjct: 237 PDGRLLARAPRFTEELLVADLQLPEAGSEPLPREQPVRAADGATITVERTVLSPHPVPPY 296 Query: 271 EEEAD------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK 318 E Y A VL +RDYV+KN F VI GLSGGIDSAL A IA DA+G Sbjct: 297 EAVPPPVAPPMDDLAEVYAALVLGVRDYVRKNGFRSVICGLSGGIDSALVATIAADAIGA 356 Query: 319 ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV 378 ENV ++LP +Y+S S+ DA K G + +PI+ +V F + PSG+ Sbjct: 357 ENVHVVLLPSRYSSGHSVADAEELVKRQGLQARTVPINPMVEAFEREL------HPSGLA 410 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 EN+Q+R+R + MALSN ++LTT NKSE++ GY TLYGD +GGF P+KD+ KT V+ Sbjct: 411 EENLQARVRAVVWMALSNQHGHLVLTTGNKSELATGYSTLYGDSAGGFGPIKDVTKTMVW 470 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE 498 LA WRN + +G P IP I++K PSAELRP Q D +SLP Y +LD ++ VE Sbjct: 471 ALARWRNEQAVAAGQVP---PIPQQIIDKPPSAELRPGQLDTDSLPEYHVLDALLDDYVE 527 Query: 499 NE---ESFI--NNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + ++ I +D + +R V+ +EYKRRQ P G KIT K+FGRDR PI+N Sbjct: 528 RDMGRDALIAAGHDPALVERVIRLVDR----AEYKRRQYPPGPKITGKNFGRDRRLPITN 583 Query: 554 KFRD 557 ++R+ Sbjct: 584 RWRE 587 >gi|308270584|emb|CBX27196.1| Probable glutamine-dependent NAD(+) synthetase [uncultured Desulfobacterium sp.] Length = 558 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 220/567 (38%), Positives = 323/567 (56%), Gaps = 37/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NPV+GD N + +A +Q DL++F EL ++GYPP DL+ KK FI+ Sbjct: 8 MKIAIAQINPVIGDFEYNFNLIKSFAGKAIKQNCDLVVFPELSVTGYPPRDLLEKKDFIE 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNYSE 122 A S + L + G G++ GF + EG L NS V+ + G I+ +K LP Y Sbjct: 68 ANLSYLSRLVDEIR--GIGVICGFADKADEGNLLYNSAVLFENGKILHKTNKRLLPTYDV 125 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK----------KQGAEFLF 172 F E R F +G P ++D +GI ICED W + N K K GA + Sbjct: 126 FDESRYFEAGAEFAPYSYKDKIIGIAICEDAWNDDNSSGEKKYHLNPVSLMIKNGANLII 185 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASP++ K + R + +P I+ NQVGG D ++FDG S FD ++ Sbjct: 186 NISASPFHMGKQQFRQNMFGAIARKYKVPFIFANQVGGNDSVLFDGTSAVFDTNGRIIAL 245 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 + F +Q+ + YD N + ++ + EA A V+ RDYV K F Sbjct: 246 ARDF-DQDLI---FYDTDNPSGNLLQENMHP---VSASNTEAVLKALVMGTRDYVTKCGF 298 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 KV++GLSGGIDSA+ A IA A+G ENV T+ +P YTS ++ D A+ +G KY++ Sbjct: 299 SKVVLGLSGGIDSAITAFIAAQAIGPENVLTVFMPSSYTSKENYGDTQKLAQNIGTKYEI 358 Query: 353 LPIHDLVNHFFSLMS-QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 +PI + F L+S F Q EP + +NIQ+RIRG ILMALSN +LL+T NKSE+ Sbjct: 359 IPIDSVFEGFLKLVSPSFKQNEPE-VTEQNIQARIRGTILMALSNRENRILLSTGNKSEL 417 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GG + D+ KT V++++ + N E IP +I++K+PSA Sbjct: 418 AVGYCTLYGDMNGGLAVISDIPKTIVYEISHFINRS---------KETIPANIIKKAPSA 468 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVEN---EESFINNDQEYNDETVRYVEHLLYGSEYK 528 EL+P QTDQ+ LPPY +LD I+K +E+ + I Q ++ +TV+ V + +EYK Sbjct: 469 ELKPDQTDQDDLPPYDLLDAILKGYIEDLKGAKELIA--QGFDAKTVKDVILRVDRNEYK 526 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R QA G K+T+K+FG R YP++ ++ Sbjct: 527 RHQAAPGLKVTSKAFGYGRRYPLAQRY 553 >gi|72382815|ref|YP_292170.1| NAD+ synthase [Prochlorococcus marinus str. NATL2A] gi|72002665|gb|AAZ58467.1| NAD+ synthase [Prochlorococcus marinus str. NATL2A] Length = 569 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 225/577 (38%), Positives = 324/577 (56%), Gaps = 40/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQLNPV+GD+ GN K EE + +DL++ EL + GYPP+DL+F + Sbjct: 1 MKLALAQLNPVIGDLDGNSKKIFEICEEIKDKDVDLVITPELSLIGYPPKDLLFNPRLFE 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGF--PRQDQE--GVLNSVVILDAGNIIAVRDKINLP 118 ++ L + +++G P D E + NSVV+L+ G V K LP Sbjct: 61 EEKDVLNKLSKRLSNLSQNLSVLIGIAEPTPDIEIPKLYNSVVLLEKGTWRIVARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F S ++ + F + ++GI ICEDIW N+ K L+ Sbjct: 121 TYDVFDEKRYFRSAENSSILSFNFQKKLWKIGITICEDIWVEQNLQNEKILGKDPLKLLE 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASP+ +K R I + P+IYVNQVGG DELIFDG+SF + Sbjct: 181 NEKLDLLINLSASPFIESKSLIRQRIAAKAAIRLSCPVIYVNQVGGNDELIFDGSSFALN 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 + +L ++ F E + + +Q AS + +E + A VL ++ Sbjct: 241 KEGELKQELPSFKESVGLCDISSLKQ----------QASILSKYPTSQEVIFRALVLGVK 290 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K NFH +IGLSGGIDSAL A IAV ALG V I++P ++S S++DA A Sbjct: 291 DYARKCNFHSAVIGLSGGIDSALVATIAVAALGISKVHAILMPSPWSSAGSVKDATTLAN 350 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + +PI D++N F ++S + P+GI AEN+QSRIRG ILMA++N K +LL+ Sbjct: 351 RLGINHQKIPISDVMNSFNDILSNSIWGMPTGITAENLQSRIRGTILMAIANQKKHLLLS 410 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF L W +S +S L E+ Sbjct: 411 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTSVFDLCDWIDSESSSSCRNDFSLPEKGEI 470 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVR 516 I I +K PSAELRP Q D +SLP Y ILD I+K ++E E I ++ ++ + V Sbjct: 471 ISSEIRDKPPSAELRPEQLDSDSLPEYSILDQILKGLIEQHLPTEVLI--EKGFDKKIVH 528 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 V +LL +E+KR QAP KI+ ++FG PI++ Sbjct: 529 KVANLLKNAEFKRYQAPPLLKISNQAFGSGWKKPIAS 565 >gi|124026550|ref|YP_001015665.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. NATL1A] gi|123961618|gb|ABM76401.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. NATL1A] Length = 569 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 227/577 (39%), Positives = 326/577 (56%), Gaps = 40/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQLNPV+GD+ GN K EE + +DL++ EL + GYPP+DL+F + Sbjct: 1 MKLALAQLNPVIGDLDGNSEKIFEVCEEIKDKDVDLVITPELSLIGYPPKDLLFNPRLFE 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGF--PRQDQE--GVLNSVVILDAGNIIAVRDKINLP 118 A++ L + +++G P D E + NSVV+L+ G V K LP Sbjct: 61 EEKDALNKLSKRLSNLSQNLSVLIGIAEPTPDIEIPKLYNSVVLLEKGTWRIVARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F S ++ + F + ++GI ICEDIW N+ K L+ Sbjct: 121 TYDVFDEKRYFRSAENSSILSFNFQKKLWKIGITICEDIWVEQNLQNEKILGKDPLKFLE 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASP+ +K R I + P+IYVNQVGG DELIFDG+SF + Sbjct: 181 NEKLDLLINLSASPFIESKSLIRQRIAAKAAMRLSCPVIYVNQVGGNDELIFDGSSFAIN 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 + +L ++ F E + + +Q Q + +S S +E + A VL ++ Sbjct: 241 KEGELKQELPSFKESVGLCDISSLKQ--QPSILSKYPTS--------QEVIFRALVLGVK 290 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K NFH +IGLSGGIDSAL A IAV ALG V I++P ++S S++DA A Sbjct: 291 DYARKCNFHSAVIGLSGGIDSALVATIAVAALGISKVHAILMPSPWSSAGSVKDATTLAN 350 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + +PI D++N F ++S + P GI AEN+QSRIRG ILMA++N K +LL+ Sbjct: 351 RLGINHQKIPISDVMNSFNDVLSNSIWGIPIGITAENLQSRIRGTILMAIANQKKYLLLS 410 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF L W +S +S L E+ Sbjct: 411 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTSVFDLCDWIDSESSSSCRNDFSLPEKGEI 470 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVR 516 I I +K PSAELRP Q D +SLP Y ILD I+K ++E E I ++ ++ + V Sbjct: 471 ISSEIRDKPPSAELRPEQLDSDSLPEYSILDQILKGLIEQHLPTEVLI--EKGFDKKIVH 528 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 V +LL +E+KR QAP KI+ ++FG PI++ Sbjct: 529 KVANLLKNAEFKRYQAPPLLKISNQAFGSGWKKPIAS 565 >gi|308234765|ref|ZP_07665502.1| NAD+ synthetase [Gardnerella vaginalis ATCC 14018] Length = 565 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/589 (37%), Positives = 327/589 (55%), Gaps = 57/589 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQ++ VG+I+ N + R ++A+ D+++F E+ ++GYP EDL + + Sbjct: 1 MTSLRLALAQIDTCVGNISKNTDEILRFCKDASSGNADIVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIV------------VGFPRQDQEGVLNSVVILDAGNII 109 F +A S A +L D G + +G PR N ++++ G + Sbjct: 61 FRKAASDAAYSLAKILKDSGLADLYVVVGTVGVDDELGKPR-------NRLLVIHDGKVE 113 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 V DK LPNY F E R F SG + + +LG ICEDIW++ L K+G + Sbjct: 114 LVYDKHFLPNYGVFDEFRIFSSGDDCGILNVKGAKLGFAICEDIWQDGGPVARLSKEGID 173 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L ++N SPY K R ++ + ++ P++YVNQVG QD+L+FDG SF + L Sbjct: 174 VLVTINGSPYEEGKTDIRLKLAQKRAKELNAPLVYVNQVGAQDDLVFDGGSFVVNADGSL 233 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA---STMYIPLQEEEADYNACVLSLRDY 286 + K F DQ LS ++ +D A ST+ L +E Y ACVL LRDY Sbjct: 234 IERSKMF-----------DQDLSFVDFNTDLDAQKCSTIAQKLDPDEEVYCACVLGLRDY 282 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 ++KN F V +GLSGGIDSAL A +A DA G +NV I +P Y+S S +DA AK L Sbjct: 283 MRKNGFKGVCLGLSGGIDSALVATMAADACGGQNVWGISMPSMYSSLGSKDDACDLAKRL 342 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G YD+ PI L F + Q + G+ AEN+Q+R+RG I+MA SN + L T Sbjct: 343 GAHYDIQPIEPLFKSFQN------QLDLQGVAAENLQARVRGVIVMAYSNSKGLLALATG 396 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN---SHGITSGLGPLTE----- 458 NKSE++ GY T+YGD GG+ P+KDL+KT+V+ L+ WRN +G+ G+ P+ Sbjct: 397 NKSELACGYSTIYGDAVGGYAPIKDLFKTRVWALSRWRNRAAQNGVGLGMLPIAGSEDFP 456 Query: 459 ---------VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE 509 +IP + + K PSAELRP Q D +SLP Y +LD +++ +E + + Sbjct: 457 KDNAPKDSILIPVNSIIKPPSAELRPGQKDSDSLPEYDLLDKVLEAHIELAHGRADLLAD 516 Query: 510 -YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +++ TV V L+ +E+KRRQ P+G K++A +FGRDR P++ FR+ Sbjct: 517 GFDERTVDTVIRLVDRAEWKRRQYPLGPKVSAIAFGRDRRIPVTTAFRE 565 >gi|29832491|ref|NP_827125.1| NH(3)-dependent NAD(+) synthetase [Streptomyces avermitilis MA-4680] gi|29609610|dbj|BAC73660.1| putative NH(3)-dependent NAD(+) synthetase [Streptomyces avermitilis MA-4680] Length = 584 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 217/596 (36%), Positives = 320/596 (53%), Gaps = 52/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGDIAGN R + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F++A +A+ L + + G G ++VG+ P+ Q N+ +L G + Sbjct: 61 FVEASRTALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLHRGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 ALTFAKHHLPNYGVFDEFRYFVPGDTMPIVRLHGVDIALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + Sbjct: 181 GLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQW-NYMSDDSASTMYIPLQEE--------------- 272 + + FSE + + ++ + DD + + EE Sbjct: 241 VVARAPQFSEGCVVLDLDLPAAEAEPPTGVVDDGLRIDRLVISEEPLPAYEAELAGGYAD 300 Query: 273 --EAD---YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 +AD Y+A V+ LR YV KN F V+IGLSGGIDSAL AAIA DALG +NV + +P Sbjct: 301 RLDADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + + I + + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLGL------TGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT +F+LA WRN Sbjct: 415 GTTLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSIFRLAEWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES----- 502 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 475 AAERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDTGADAIV 531 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 D+E +T+R V+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+H Sbjct: 532 AAGYDRELVVKTLRMVDT----AEYKRRQYPPGTKISAKGFGKDRRLPITNRWREH 583 >gi|302560983|ref|ZP_07313325.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces griseoflavus Tu4000] gi|302478601|gb|EFL41694.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces griseoflavus Tu4000] Length = 586 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 217/595 (36%), Positives = 314/595 (52%), Gaps = 52/595 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN R + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSSVGDLAGNAETIVRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F++A + + +L S + G G +VVG+ P+ Q N+ +L G + Sbjct: 61 FVEASRAGLRSLASRLAEEGLGELPVVVGYLDRSAAAQPKYGQPAGAPQNAGAVLYGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + R I + + ICED+W++ + A Sbjct: 121 VLSFAKHHLPNYGVFDEFRYFVPGDTMPVVRVRGIDVALAICEDLWQDGGRVPAARSARA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D Sbjct: 181 GLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMMGGQDELVFDGDSIVVDRDGG 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNY-MSDDSASTMYIPLQEE--------------- 272 + + FSE + + ++ + DD + L EE Sbjct: 241 VVARAPQFSEACVVVDLELPAAVADAPVGVVDDGLRIDRVVLSEEPVPAYEAGSGEAYAE 300 Query: 273 -----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 E Y+A V+ LR YV KN F V+IGLSGGIDSAL AA+A DA+G ENV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYVAKNGFRSVVIGLSGGIDSALVAALACDAVGAENVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSEHSKDDAAELARRTGLNYRTVAIEPMFDAYMGALGL------TGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTLLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAEWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES----- 502 + G P IP + + K PSAELRP Q D +SLP YP+LD I+ V+ + Sbjct: 475 AVERGETP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILALYVDRDRGADEIV 531 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D E T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N +R+ Sbjct: 532 AAGFDAELVTRTLRMVDR----AEYKRRQYPPGTKISPKGFGKDRRLPITNGWRE 582 >gi|311114516|ref|YP_003985737.1| NH(3)-dependent NAD+ synthetase [Gardnerella vaginalis ATCC 14019] gi|310946010|gb|ADP38714.1| NH(3)-dependent NAD+ synthetase [Gardnerella vaginalis ATCC 14019] Length = 571 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/589 (37%), Positives = 327/589 (55%), Gaps = 57/589 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQ++ VG+I+ N + R ++A+ D+++F E+ ++GYP EDL + + Sbjct: 7 MTSLRLALAQIDTCVGNISKNTDEILRFCKDASSGNADIVVFPEMTLTGYPIEDLALRAT 66 Query: 62 FIQACSSAIDTLKSDTHDGGAGIV------------VGFPRQDQEGVLNSVVILDAGNII 109 F +A S A +L D G + +G PR N ++++ G + Sbjct: 67 FRKAASDAAYSLAKILKDSGLADLYVVVGTVGVDDELGKPR-------NRLLVIHDGKVE 119 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 V DK LPNY F E R F SG + + +LG ICEDIW++ L K+G + Sbjct: 120 LVYDKHFLPNYGVFDEFRIFSSGDDCGILNVKGAKLGFAICEDIWQDGGPVARLSKEGID 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L ++N SPY K R ++ + ++ P++YVNQVG QD+L+FDG SF + L Sbjct: 180 VLVTINGSPYEEGKTDIRLKLAQKRAKELNAPLVYVNQVGAQDDLVFDGGSFVVNADGSL 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA---STMYIPLQEEEADYNACVLSLRDY 286 + K F DQ LS ++ +D A ST+ L +E Y ACVL LRDY Sbjct: 240 IERSKMF-----------DQDLSFVDFNTDLDAQKCSTIAQKLDPDEEVYCACVLGLRDY 288 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 ++KN F V +GLSGGIDSAL A +A DA G +NV I +P Y+S S +DA AK L Sbjct: 289 MRKNGFKGVCLGLSGGIDSALVATMAADACGGQNVWGISMPSMYSSLGSKDDACDLAKRL 348 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G YD+ PI L F + Q + G+ AEN+Q+R+RG I+MA SN + L T Sbjct: 349 GAHYDIQPIEPLFKSFQN------QLDLQGVAAENLQARVRGVIVMAYSNSKGLLALATG 402 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN---SHGITSGLGPLTE----- 458 NKSE++ GY T+YGD GG+ P+KDL+KT+V+ L+ WRN +G+ G+ P+ Sbjct: 403 NKSELACGYSTIYGDAVGGYAPIKDLFKTRVWALSRWRNRAAQNGVGLGMLPIAGSEDFP 462 Query: 459 ---------VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE 509 +IP + + K PSAELRP Q D +SLP Y +LD +++ +E + + Sbjct: 463 KDNAPKDSILIPVNSIIKPPSAELRPGQKDSDSLPEYDLLDKVLEAHIELAHGRADLLAD 522 Query: 510 -YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +++ TV V L+ +E+KRRQ P+G K++A +FGRDR P++ FR+ Sbjct: 523 GFDERTVDTVIRLVDRAEWKRRQYPLGPKVSAIAFGRDRRIPVTTAFRE 571 >gi|167630843|ref|YP_001681342.1| nad+ synthetase [Heliobacterium modesticaldum Ice1] gi|167593583|gb|ABZ85331.1| nad+ synthetase [Heliobacterium modesticaldum Ice1] Length = 552 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/573 (38%), Positives = 328/573 (57%), Gaps = 43/573 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ NPVVGDIA N+ KA A A + G LI+F+EL+++GYPP+DL+ K FI Sbjct: 1 MKIAIAQYNPVVGDIANNLTKAVDAWSRAAQAGASLIVFSELYLTGYPPKDLLEKPWFID 60 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFP-RQDQ---EGVLNSVVILDAGNIIAVRDKINLPN 119 +A++ L + D I++G P R D +G+ N+ ++ G ++ + K LP Sbjct: 61 RTEAALNELVRRSVDYPDTAILIGAPLRWDNPAGKGLANAAWLIGGGKVLHHQAKSLLPT 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----------NICKHLKKQGA 168 Y F E R F S P+ F +LGI +CED W + + + L +QGA Sbjct: 121 YDVFDEARYFDPAPSVVPVPFGGEQLGISVCEDAWNDPAFWPQRRRYDRDPIEELARQGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +++ASP+ +K + R+ ++ +P +YVNQVG DELIFDG S FD Q Sbjct: 181 TVLINISASPFEMSKEETRYRLIRSHAVRYGIPFVYVNQVGANDELIFDGGSMVFDRQGT 240 Query: 229 LAFQMKHFSEQNFMTEWHY---DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 L F E + + DQ + ++++ D ++++ +A VL + D Sbjct: 241 LLALSPAFREDLTVVDLKQATQDQPGAPASFVAQDRVASVH----------DALVLGIAD 290 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y++K+ F K ++GLSGGIDSA+ +A +ALG ENV I +P Y+S S+ED+ A Sbjct: 291 YLRKSGFTKAVVGLSGGIDSAVTCCLAAEALGAENVLGISMPSPYSSMGSVEDSRLLAAN 350 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG + V+PI D+ + + + + + + + EN+Q+RIRGN+LMA SN +LL+T Sbjct: 351 LGVPFKVIPIADIYHAYLFTLEEHFEGRKADVTEENLQARIRGNMLMAFSNKFGHLLLST 410 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++ GY TLYGDMSGG + L D+ KT V++LA N I+ Sbjct: 411 GNKSELATGYCTLYGDMSGGLSVLSDVPKTLVYELAEHINREREIIPR---------III 461 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLL 522 EK+PSAELRP Q DQ++LPPYP+LD I++ +E + E+ I ++ + E VR+V + Sbjct: 462 EKAPSAELRPGQKDQDTLPPYPVLDAILQLYIEEGQSAEAII--ERGFEAEMVRWVIKTV 519 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 SEYKRRQA G K+T+K+FG R P++ K+ Sbjct: 520 NRSEYKRRQAAPGLKVTSKAFGVGRRMPVAAKY 552 >gi|159039123|ref|YP_001538376.1| NAD+ synthetase [Salinispora arenicola CNS-205] gi|157917958|gb|ABV99385.1| NAD+ synthetase [Salinispora arenicola CNS-205] Length = 586 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 230/597 (38%), Positives = 332/597 (55%), Gaps = 54/597 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q+NP VGD+AGN R A G L+ F E+ ++GYP EDLVF++S Sbjct: 1 MTTLRLALCQVNPAVGDLAGNATTVREWTRRAADAGAQLVAFPEMMLTGYPVEDLVFRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-----PRQ---DQE---GVLNSVVILDAGN 107 FI A +A+D L +D G G ++VG+ P Q D E G N+ +L G+ Sbjct: 61 FIAASKAALDGLAADLAADGLGNLPVLVGYLDADGPPQVNGDAEPGRGARNAAALLHGGS 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 IA K +LPNY F E R F+ G + + + + + ICED+W+ ++ G Sbjct: 121 TIATYFKHHLPNYGVFDEDRYFVPGETLTVVRIGGVDVTLTICEDLWQVGGPFAAARQAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + ++N SPY K R +V + + I YVN VGGQDEL+F+G S + Sbjct: 181 VGLVLNINGSPYELKKDDIRLPLVRRRAAEAGATIAYVNMVGGQDELVFEGDSMIVTAEG 240 Query: 228 QLAFQMKHFSEQNFMTEWHY---------DQQLSQWNYM------------SDDSASTMY 266 L + F E + + D +L+ + +D A+ Sbjct: 241 TLLARAPQFVEHLLVHDVDLPTATDGPPADVELADGMRVLHRHLESVPAAPTDQRATGGI 300 Query: 267 I-PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 I P +E + A +L LRDYV KN F V++GLSGGIDSA+ AA+AVDALG + V + Sbjct: 301 IEPAADEAEGWQALLLGLRDYVDKNRFPSVVLGLSGGIDSAVVAALAVDALGPDRVVGVS 360 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 LP +++S S EDAA AK G Y V PI +V+ + +S SG+ EN+Q+R Sbjct: 361 LPSQHSSEHSREDAAELAKRTGLDYRVEPIQPIVDTVLANLSL------SGLSVENLQAR 414 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +RG ILMALSN ++LTT NKSE++VGY TLYGD GGFNP+KD++KTQV+QLA WRN Sbjct: 415 VRGVILMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGFNPIKDVWKTQVWQLAKWRN 474 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ES 502 + + G P IP + + K PSAEL P Q D ++LP Y +LD I+ ++ + + Sbjct: 475 AEALRRGETP---PIPENSIGKPPSAELSPGQLDSDTLPEYDLLDPILIGYIDGDLGRDG 531 Query: 503 FI--NNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + +D D+ +R V+ +EYKRRQ+ GTKI+ K+FGRDR PI+N++R+ Sbjct: 532 LVEAGHDPAVVDQVLRMVDT----AEYKRRQSAPGTKISMKAFGRDRRLPITNRWRE 584 >gi|239931662|ref|ZP_04688615.1| NH(3)-dependent NAD(+) synthetase [Streptomyces ghanaensis ATCC 14672] Length = 588 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/596 (36%), Positives = 316/596 (53%), Gaps = 52/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+ GN R + +G L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSRVGDLDGNTETILRWTRHSAERGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F++A +A+ +L + + G G +VVG+ P+ Q N+ +L G + Sbjct: 61 FVEASRAALRSLAARLAEEGFGELPVVVGYLDRSAAAQPKYGQPAGAPQNAGAVLYGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 VLAFAKHHLPNYGVFDEFRYFVPGDTMPVVRVHGVDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R E+V + Y+ GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLELVRKRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGA 240 Query: 229 LAFQMKHFSEQNFMT------------EWHYDQQLSQWNYMSDDSASTMYIP-------- 268 + + F+E F+ D L + ++ Y P Sbjct: 241 VVTRAPQFTEGCFVVDLDLPAAAADAPTGTVDDGLRIDRVVLSEAPLPAYEPEQAGGCAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYVEKNGFESVLIGLSGGIDSALVAAIACDAVGAENVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSGHSRDDAAELARRTGLNYRTVAIEPMFDAYMGALGL------TGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMALSN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTLLMALSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLARWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES----- 502 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 475 AQERGETP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDRGADEIV 531 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 D+E +T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N +R+ Sbjct: 532 AAGFDRELVAKTLRMVDR----AEYKRRQYPPGTKISPKGFGKDRRLPITNGWREQ 583 >gi|86608724|ref|YP_477486.1| NAD+ synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557266|gb|ABD02223.1| NAD+ synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 558 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 224/566 (39%), Positives = 314/566 (55%), Gaps = 29/566 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ QLN +VGD++GN + R A E G +L + +EL + GYPP DL+ + ++ Sbjct: 1 MKVALLQLNYIVGDLSGNAERIRSAVEAVAAAGAELAITSELALLGYPPRDLLLYPALVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S + L S +VVG P + + N+ L+ G I K LP Y Sbjct: 61 RASQVLQHLASRLQ-ASIPVVVGSVQPNPLPEGRPLYNAAAWLEGGQIRHWFQKSLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH----------LKKQGAEF 170 F E R F G PI +R RLG ICEDIW + + +H + + GA+ Sbjct: 120 DVFDEDRYFEPGSQPQPIEYRGRRLGFTICEDIWNDRDFWQHRRYHWDPVEQMARCGADL 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVH-LPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L +L+ASP+ K K R E++ G ++ H LPI+YVNQVGG D+LIFDGAS D + ++ Sbjct: 180 LINLSASPFSLGKQKLRVEML-GSLARKHALPILYVNQVGGNDDLIFDGASCAVDRRGRV 238 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 Q F + + D+ N + P + E Y A VL RDYV K Sbjct: 239 VAQAAAFQPDQLILD--VDELTQSPNPDQSPPTAGSRWPTEPEAELYEALVLGTRDYVSK 296 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F +V++GLSGGIDSA+ A IA DALG E V +++P Y+SP SL DA A+ LG Sbjct: 297 CGFREVLLGLSGGIDSAVTAVIAADALGPERVLGVLMPSPYSSPGSLTDAYQLAQNLGIP 356 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 LPI ++ + L+++ P I EN+QSRIRG +LMALSN +LLTT NKS Sbjct: 357 TLKLPIQSIMESYHQLLAEPFAGLPPDITEENLQSRIRGTLLMALSNKFGRLLLTTGNKS 416 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY T+YGDMSGG + D+ KT V++LA W N E IP + L K P Sbjct: 417 ELAVGYCTIYGDMSGGLAVISDVPKTWVYRLARWINRQ---------QERIPLATLTKPP 467 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP Q D +SLPPY +LD I++R +E +S Q ++ +TV++V L+ +E+K Sbjct: 468 SAELRPGQQDSDSLPPYDLLDRILQRHIEQHQSGPELVAQGFDPDTVQHVLRLVQNAEFK 527 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNK 554 R QAP G +IT ++FG PI+ + Sbjct: 528 RHQAPPGLRITDRAFGTGWRMPIAKR 553 >gi|91200981|emb|CAJ74038.1| similar to NAD synthase [Candidatus Kuenenia stuttgartiensis] Length = 547 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 221/572 (38%), Positives = 323/572 (56%), Gaps = 49/572 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ+N VVGD N+ K E A R+ DL++F EL ++GYPP+D + +F+ Sbjct: 1 MKVALAQINTVVGDFENNVRKICSFIERAKRKHADLVVFPELAVTGYPPKDFLDIPAFV- 59 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPN 119 S + L+ T G +VGF ++++ V N+ + I++V K LP Sbjct: 60 --SHNLKALRDITQQVSGIAAIVGFVDRNRQSYGKLVHNAAAFIQDRQIVSVHHKSLLPT 117 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAE 169 Y F E R F S S P+ F + LGI ICEDIW + ++ + L +GA Sbjct: 118 YDVFDESRYFESACSITPVQFNNYTLGISICEDIWNDEEFWTRPLYETDPIEKLISKGAN 177 Query: 170 FLFSLNASPYYHNKLKK-RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + +++ASP+ K + R ++T +P IYVNQ+GG DEL+FDG+S + Q + Sbjct: 178 VIINISASPFTVEKHESIRLRMLTHDAKKYKVPFIYVNQIGGNDELVFDGSSAVINAQGK 237 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP--LQEEEADYNACVLSLRDY 286 Q F E + + ++ +T +P E A +L LRDY Sbjct: 238 RIAQAAAFGEDLIVVDL--------------ENTATQVVPQTFTPIETVQKALLLGLRDY 283 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V K F KVIIGLSGGIDSA+ AA+AV+ALG ENV I++P +++S S++DA +K L Sbjct: 284 VVKCGFEKVIIGLSGGIDSAVTAALAVEALGSENVMGIIMPSQFSSQGSVDDAVQLSKNL 343 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 Y + PI DL + + +++ + + P I EN+Q+RIRGNI+M LSN ++L+T Sbjct: 344 AIDYRIFPIKDLFDGYQTILREEFRGLPFDIAEENLQARIRGNIIMTLSNKYGYLVLSTG 403 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE++VGY TLYGDM+GG + D+ KT V++LA + N E+IP L Sbjct: 404 NKSEMAVGYCTLYGDMNGGLALISDVPKTMVYELAKYMNRE---------KEIIPQETLS 454 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLY 523 K PSAELRP+Q DQ+SLPPY ILD I+K +E E + +++ TVR V + Sbjct: 455 KPPSAELRPNQLDQDSLPPYNILDSILKAYIEEAKCIEEIVR--MGFDETTVRDVIQKVN 512 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +EYKRRQA G K+T+K+FG R PI++KF Sbjct: 513 RNEYKRRQAAPGIKVTSKAFGSGRRMPIAHKF 544 >gi|296269233|ref|YP_003651865.1| NAD+ synthetase [Thermobispora bispora DSM 43833] gi|296092020|gb|ADG87972.1| NAD+ synthetase [Thermobispora bispora DSM 43833] Length = 584 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 226/600 (37%), Positives = 317/600 (52%), Gaps = 57/600 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ NPVVGDI GN A + L+ F E+F++GYPPEDLV + S Sbjct: 1 MAQLRIALAQTNPVVGDITGNAEMLVEWTRRAAERNAHLVAFPEMFLTGYPPEDLVLRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-------PR--QDQEGVLNSVVILDAGNII 109 F++A +SA+ G G ++VG+ PR Q + L++ +L G +I Sbjct: 61 FVEASTSALTAAAERLAAEGLGDLPVIVGYLDRAGLTPRVGQPKGAPLDAAALLHRGRVI 120 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G I + + ICED+W++ + + GA Sbjct: 121 TKSAKHHLPNYGVFDEHRYFVRGDRLPIFRLHGIDVAVAICEDLWQDGGPVSVVGEVGAG 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L LN SPY NK R E+ + I YVN VGGQDEL+FDG S +L Sbjct: 181 LLVVLNGSPYEMNKDDVRLELCARRAREAGCTIAYVNLVGGQDELVFDGDSLIVSPTGEL 240 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI-------------PLQEEEAD- 275 + F+E+ + + + + + D+ I P + E A Sbjct: 241 IARAAQFTEELLVADLDLPEGTGEPGEVRVDARDGTVITVERFTISAEPVAPYEPEPARI 300 Query: 276 ----------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 Y A VL RDYV KN F VI+GLSGGIDSAL A IAVDALG V ++ Sbjct: 301 AERLDDLAEVYQALVLGTRDYVTKNGFRSVILGLSGGIDSALTATIAVDALGPSRVHAVL 360 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P +Y+S S+ DA + G +PI ++ F +S G+ AEN+Q+R Sbjct: 361 MPSRYSSEHSIIDAEELVRRQGINAVTVPITGIMEAFEKEISLH------GLAAENLQAR 414 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 IRG ILM+LSN ++LTT NKSE++ GY TLYGD +GGF P+KD+ KT V++LA WRN Sbjct: 415 IRGMILMSLSNEHGHLVLTTGNKSELATGYSTLYGDSAGGFAPIKDVLKTMVWRLAEWRN 474 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE-----NE 500 + IP + + K PSAELRP Q D +SLPPY +LD +++ VE +E Sbjct: 475 AQPPGP------PPIPENSITKEPSAELRPGQRDTDSLPPYHVLDPLLRDYVERDMGRDE 528 Query: 501 ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 +D E +R V+ +EYKRRQ P G KIT K+FGRDR P++N++R+ ++ Sbjct: 529 LIAAGHDPELVTRVIRMVDR----AEYKRRQYPPGPKITPKNFGRDRRLPLTNRWRERLA 584 >gi|209525771|ref|ZP_03274307.1| NAD+ synthetase [Arthrospira maxima CS-328] gi|209493744|gb|EDZ94063.1| NAD+ synthetase [Arthrospira maxima CS-328] Length = 565 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 223/572 (38%), Positives = 316/572 (55%), Gaps = 36/572 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP VGD+ GN A + A + L++ EL + GYPP DL+ + SFI Sbjct: 1 MKIAIAQINPTVGDLTGNAQLILEAAQSAINEDASLLITPELALIGYPPRDLLIRPSFIN 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLP 118 A ++ L A G V PR + G + N+ +L G I V K LP Sbjct: 61 AAQQQLEKLAQQLPVELAVLVGTVFPNPRASELGGKPLFNTAALLMGGEIKQVFHKRLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRD------IRLGILICEDIWKNSNICKH---------- 162 Y F E R F ++D ++F+ +++G+ ICED+W + + H Sbjct: 121 TYDVFDEHRYFEPAPASDVLIFKKPRSEEIVKIGVTICEDLWNDEDFWGHRNYPCDPMKD 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L + +++ +L+ SPY K + R ++T +PIIY NQVG D+LIFDG+S Sbjct: 181 LSDRHVDWVVNLSGSPYRAGKQQLRKAMLTHSARRYAIPIIYTNQVGANDDLIFDGSSLV 240 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 +G ++ + F + EW D S + S +S T L E+E + A VL Sbjct: 241 INGGGEVVKSLAPFQTDFQIIEW--DSNSSTFVGESVNSDDTQL--LDEDEEIWRALVLG 296 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RDY +K F KV+IGLSGGIDS+L AAIA +ALG + V +++P Y+S SLEDA Sbjct: 297 VRDYTRKCGFSKVVIGLSGGIDSSLVAAIATEALGSQQVLGVLMPSPYSSEHSLEDAFDL 356 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A LG LPI ++N F + + GI EN+QSRIRG +LMA+SN +L Sbjct: 357 ANNLGISTKTLPIESVMNAFDTTLYDLFAGTQFGIAEENMQSRIRGTLLMAISNKFGHLL 416 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN-SHGITSGLGPLTEVIP 461 L+T NKSEI+VGY TLYGDM+GG + D+ KT+V+ + W N S G E+IP Sbjct: 417 LSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTRVYSICKWLNESRG--------REIIP 468 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEH 520 ++L K SAEL+P Q D +SLPPY ILDDI+ R++E ES +D +TV + Sbjct: 469 NNVLIKPASAELKPGQFDSDSLPPYHILDDILYRLIEKHESVATIIAAGHDCQTVERMVK 528 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ G+E+KRRQAP G KI+ ++FG PI+ Sbjct: 529 LVMGAEFKRRQAPPGLKISDRAFGTGWRMPIA 560 >gi|291440029|ref|ZP_06579419.1| NAD(+) synthase [Streptomyces ghanaensis ATCC 14672] gi|291342924|gb|EFE69880.1| NAD(+) synthase [Streptomyces ghanaensis ATCC 14672] Length = 615 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/596 (36%), Positives = 316/596 (53%), Gaps = 52/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+ GN R + +G L+ F E+ ++GYP EDL + S Sbjct: 28 VPQLRLALNQIDSRVGDLDGNTETILRWTRHSAERGAHLVAFPEMVLTGYPVEDLALRSS 87 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F++A +A+ +L + + G G +VVG+ P+ Q N+ +L G + Sbjct: 88 FVEASRAALRSLAARLAEEGFGELPVVVGYLDRSAAAQPKYGQPAGAPQNAGAVLYGGEV 147 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 148 VLAFAKHHLPNYGVFDEFRYFVPGDTMPVVRVHGVDVALAICEDLWQDGGRVPAARSAGA 207 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R E+V + Y+ GGQDEL+FDG S D Sbjct: 208 GLLLSINASPYEREKDDTRLELVRKRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGA 267 Query: 229 LAFQMKHFSEQNFMT------------EWHYDQQLSQWNYMSDDSASTMYIP-------- 268 + + F+E F+ D L + ++ Y P Sbjct: 268 VVTRAPQFTEGCFVVDLDLPAAAADAPTGTVDDGLRIDRVVLSEAPLPAYEPEQAGGCAE 327 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV + +P Sbjct: 328 RLDDDEEVYSALVVGLRAYVEKNGFESVLIGLSGGIDSALVAAIACDAVGAENVYGVSMP 387 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR+R Sbjct: 388 SKYSSGHSRDDAAELARRTGLNYRTVAIEPMFDAYMGALGL------TGLAEENLQSRLR 441 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMALSN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 442 GTLLMALSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLARWRNRA 501 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES----- 502 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 502 AQERGETP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDRGADEIV 558 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 D+E +T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N +R+ Sbjct: 559 AAGFDRELVAKTLRMVDR----AEYKRRQYPPGTKISPKGFGKDRRLPITNGWREQ 610 >gi|300193273|pdb|3N05|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Streptomyces Avermitilis gi|300193274|pdb|3N05|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Streptomyces Avermitilis Length = 590 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 217/596 (36%), Positives = 319/596 (53%), Gaps = 52/596 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L++A+ Q++ VGDIAGN R + QG L+ F E+ ++GYP EDL + Sbjct: 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGN 107 SF++A +A+ L + + G G ++VG+ P+ Q N+ +L G Sbjct: 61 SFVEASRTALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLHRGR 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 + K +LPNY F E R F+ G + + + + + ICED+W++ + G Sbjct: 121 VALTFAKHHLPNYGVFDEFRYFVPGDTMPIVRLHGVDIALAICEDLWQDGGRVPAARSAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 A L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D Sbjct: 181 AGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQW-NYMSDDSASTMYIPLQEE-------------- 272 ++ + FSE + + ++ + DD + + EE Sbjct: 241 EVVARAPQFSEGCVVLDLDLPAAEAEPPTGVVDDGLRIDRLVISEEPLPAYEAELAGGYA 300 Query: 273 ---EAD---YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 +AD Y+A V+ LR YV KN F V+IGLSGGIDSAL AAIA DALG +NV + + Sbjct: 301 DRLDADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSM 360 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P KY+S S DAA A+ G + + I + + + + + +G+ EN+QSR+ Sbjct: 361 PSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLGL------TGLAEENLQSRL 414 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT +F+LA WRN Sbjct: 415 RGTTLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSIFRLAEWRNR 474 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES---- 502 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 475 AAAERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDTGADAI 531 Query: 503 -FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D+E +T+R V+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 532 VAAGYDRELVVKTLRMVDT----AEYKRRQYPPGTKISAKGFGKDRRLPITNRWRE 583 >gi|186685760|ref|YP_001868956.1| NAD synthetase [Nostoc punctiforme PCC 73102] gi|186468212|gb|ACC84013.1| NAD+ synthetase [Nostoc punctiforme PCC 73102] Length = 572 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 220/569 (38%), Positives = 320/569 (56%), Gaps = 35/569 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP +GD+ N K A + A G L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQINPTIGDLPLNAQKILEAAQRAASSGARLLLTPELSLCGYPPRDLLLNPSFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINL 117 A ++ L D A ++VG Q+ + NS+ +L+ G + V K L Sbjct: 61 AMGISLQNLAQDLPPNLA-VLVGTVEQNLNASISGGKTLFNSMALLENGKVKQVFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQG 167 P Y F E+R F G + +I +G+ ICED+W + N L G Sbjct: 120 PTYDVFDERRYFEPGLQANYFTLDNIDIGVTICEDLWNDEEFWGKRSYTVNPIADLAILG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K + R ++ P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDLIVNLSASPYTVGKQQLRETMLRHSAVRFQQPMIYTNQVGGNDDLIFDGHSFALNRQG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + + F + E +D+ + S + A E+E + A VL +RDY Sbjct: 240 EIISRARGFDTDLVVVE--FDETQRDFQLASVEPAYQ-----SEDEEIWQALVLGVRDYA 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +K F KV++GLSGGIDSA+ AAIA ALGKENV +++P Y+S S+ DA A AK LG Sbjct: 293 RKCRFSKVVLGLSGGIDSAIVAAIATAALGKENVLGVLMPSPYSSEHSISDALALAKNLG 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K ++LPI +L+ F + G+ ENIQSRIRGN+LMA++N +LL+T N Sbjct: 353 IKTNLLPIGELMQGFDQTLGDLFAGTEFGLAEENIQSRIRGNLLMAIANKFGYLLLSTGN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V+ L W N + E+IP ++L K Sbjct: 413 KSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCHWLNRN---------NEIIPQNVLTK 463 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSE 526 +PSAEL+P Q DQ+SLPPY +LDDI++R++ N +S + +D V V ++ +E Sbjct: 464 APSAELKPGQVDQDSLPPYEVLDDILQRLIHNHQSAVQIVAAGHDAVIVDRVIQMVARAE 523 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G KIT ++FG PI++ + Sbjct: 524 FKRRQAPPGLKITDRAFGTGWRMPIASNW 552 >gi|120602568|ref|YP_966968.1| NAD+ synthetase [Desulfovibrio vulgaris DP4] gi|120562797|gb|ABM28541.1| NH(3)-dependent NAD(+) synthetase [Desulfovibrio vulgaris DP4] Length = 559 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/568 (38%), Positives = 315/568 (55%), Gaps = 31/568 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q++ VVGDI GN A+ A EA G L + EL + GYPP DL+ + F+ Sbjct: 1 MKVALLQIDTVVGDIVGNAARIADAVREAASLGARLCVTPELALCGYPPRDLLLQDDFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSV----VILDAGNIIAVRDKINLPNY 120 AC A++ L D ++VG P + V N + V+L G + K+ LPNY Sbjct: 61 ACRKALEALAQQLRDLPP-VLVGAPVPNPSPVGNPIHNCAVLLREGKVTVATRKVLLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH-----------LKKQGAE 169 F E+R F SG + R G+ ICED+W + + L GA+ Sbjct: 120 DVFDERRYFESGVGCGVVTIDGWRFGVTICEDVWNDKTFWQEHRHYENDPVADLMAGGAD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L+ASP+ K R +++ + ++Y NQVGG D+L+F G S FD L Sbjct: 180 AILNLSASPFTLGKQAVRERMLSRVAFRYRVSVLYANQVGGNDDLVFAGKSIAFDATGTL 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + + F+E M + ++ + + P +EE + A VL RDY +K Sbjct: 240 IARGRSFAEDIVMVD------------VAQATGTITAEPTSDEEQVWKALVLGTRDYARK 287 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F ++GLSGGIDSAL AA+A +ALG + V +++P ++S S+ DA A A +LG Sbjct: 288 CGFEGAVLGLSGGIDSALVAAVAAEALGPDKVLGVLMPSPHSSEGSVTDALALASSLGIA 347 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 +PI DL++ F + ++Q + + ENIQSRIRGN+LMALSN + +LLTT NKS Sbjct: 348 TCTIPIGDLMHGFEAALAQAFAGREADVTEENIQSRIRGNLLMALSNKQRRLLLTTGNKS 407 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG--LGPLTEVIPPSILEK 467 E++VGY T+YGDM+GG + DL KT V+++A W N + G E IP +IL K Sbjct: 408 ELAVGYCTIYGDMAGGLAVIADLPKTLVYRVAHWLNERDTSHGHEGCEARETIPSAILTK 467 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSE 526 PSAELRP Q D +SLPPY +LD I++R+VE S + E Y+ ETVR V L+ +E Sbjct: 468 EPSAELRPGQRDSDSLPPYDVLDGILERLVELRRSAADIVAEGYDVETVRKVLRLVCNAE 527 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNK 554 +KRRQAP G K+T ++FG P++ + Sbjct: 528 FKRRQAPPGLKVTDRAFGTGWRMPVAAR 555 >gi|325107816|ref|YP_004268884.1| NAD+ synthetase [Planctomyces brasiliensis DSM 5305] gi|324968084|gb|ADY58862.1| NAD+ synthetase [Planctomyces brasiliensis DSM 5305] Length = 562 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/572 (36%), Positives = 320/572 (55%), Gaps = 44/572 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I +AQ+NP+VGD+ GN K A QG +L++F EL I GYPP+D++ + F+ Sbjct: 1 MRIGLAQINPIVGDLEGNGRKILEVARRAAEQGAELLVFPELVICGYPPKDMLLRSGFVD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP--RQDQEGV-LNSVVILDAGNIIAVRDKINLPNYS 121 AC AID L + G+++G P RQ G N+ +L G ++ K LPNY Sbjct: 61 ACDEAIDALAA-ALPPELGVLIGHPTHRQQPAGCQANAASLLHNGQVVDTVAKTLLPNYD 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIW-KNSNICKHLKKQ------------GA 168 F E+R F G + PI F +RLG+ ICED W + H + + G Sbjct: 120 VFDERRYFHPGSNVRPIEFGGLRLGVHICEDAWFGQPDTFYHTRPECERDPVAALIDAGV 179 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + L +L+ASP+ +KLK+RH +++ + ++P+++VNQVGG D+L+FDG+S + + Sbjct: 180 DLLVNLSASPFEIDKLKRRHTLLSRHCQNGNVPLVFVNQVGGNDDLVFDGSSLVLNAAGE 239 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEADYNACVLSLRD 285 + Q+ F+E+ + E A+ PLQ + +A V+ LRD Sbjct: 240 VQHQLDGFAEELRIVEA---------------PATAATQPLQTASRSQQLLDALVIGLRD 284 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y K F + ++GLSGGIDSA+ +A ALG E V +M+P +Y+S S+ D+ A Sbjct: 285 YAAKCGFKECVLGLSGGIDSAVACCLAARALGPEKVHALMMPSRYSSDHSVADSQQLATN 344 Query: 346 LGCKYDVLPIHDLVNHFFS--LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 LG ++PI ++ + + ++ L +P+G+ +N+Q+RIRG ++M SN + L Sbjct: 345 LGLDAQLVPIDEVHQAYEATRVIGGDLSGQPAGLADQNLQARIRGALVMVRSNRYGWLPL 404 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T NKSE++VGY TLYGDM+GGF L D++K V+ LA N SG E+IP Sbjct: 405 ATGNKSELAVGYCTLYGDMAGGFAVLSDVFKRDVYALARHIND---ISG----QEIIPEH 457 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLY 523 I+ K PSAEL P Q DQ+SLP Y LD I++ +VE E+S + E VR+V L Sbjct: 458 IITKPPSAELAPDQFDQDSLPDYDTLDAILEGLVEREQSAAELSLHHPPEVVRWVLQKLD 517 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +E+KRRQ P G K+T ++FG R P++ +F Sbjct: 518 RNEFKRRQMPPGIKLTRRAFGSGRRMPMAARF 549 >gi|302534133|ref|ZP_07286475.1| NH(3)-dependent NAD(+) synthetase [Streptomyces sp. C] gi|302443028|gb|EFL14844.1| NH(3)-dependent NAD(+) synthetase [Streptomyces sp. C] Length = 584 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/596 (36%), Positives = 313/596 (52%), Gaps = 52/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VG+IA N + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSQVGNIAANADSVVHWTRHSAEQGAHLVAFPEMTLTGYPVEDLALRAS 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVGFPRQDQEGVL----------NSVVILDAGNI 108 F+ A +A+ L D GG +VVG+ + + N+ +L G + Sbjct: 61 FVDASRTALTALARRLADEGLGGLPVVVGYLDRSERATPRLGLPAGSPENAAAVLYGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W+ + GA Sbjct: 121 VLRFAKHHLPNYGVFDEFRYFVPGDTQPVVRVHGVDVALAICEDLWQEGGRVPATRSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY NK R E+V + + YV +GGQDEL+FDG S D + Sbjct: 181 GLLISINASPYERNKDDVRLELVRKRAQEAGCTLAYVAMIGGQDELVFDGDSIVVDAAGE 240 Query: 229 LAFQMKHFSEQNFMT------------EWHYDQQLSQWNYMSDDSASTMYIP-------- 268 + + FSE + E D L + + Y P Sbjct: 241 VVVRAPQFSEGCVLVDLDLPAARPDAPEGVVDDGLRIDRVILSEEPLEAYEPVVTGGYAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR YV KN F V+IGLSGGIDSAL AA+A DA+G +NV I +P Sbjct: 301 RLDDDEEVYDALVVGLRAYVGKNGFRSVLIGLSGGIDSALVAAVACDAVGAQNVYGIAMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A G + +PI + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSEHSEGDAADLAARTGLNFRTVPIAPMFDAYMGSLGL------TGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA +RN Sbjct: 415 GTLLMAVSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKSDVFRLARYRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF---- 503 G P IP + + K PSAELRP Q D +SLP YP+LD I+ R V+ ++ Sbjct: 475 AEERGETP---PIPENSIVKPPSAELRPGQVDTDSLPDYPVLDAILARYVDRDQGLEEIV 531 Query: 504 -INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 D+E +T+R V+ +EYKRRQ P GTKI+AK FG+DR PI+N +R+ Sbjct: 532 AAGFDRELVAKTLRMVDT----AEYKRRQYPPGTKISAKGFGKDRRLPITNGWRER 583 >gi|254479264|ref|ZP_05092607.1| NAD synthase family protein [Carboxydibrachium pacificum DSM 12653] gi|214034802|gb|EEB75533.1| NAD synthase family protein [Carboxydibrachium pacificum DSM 12653] Length = 543 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 219/565 (38%), Positives = 323/565 (57%), Gaps = 36/565 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI N K + E+A + DL++F EL GYPP+D +F K FI+ Sbjct: 1 MKIALAQINPVVGDIKHNCEKIVKYIEKAKEEKADLVVFPELSTVGYPPKDFLFVKDFIK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 I+ + D A I++G R+D+ + + NS + II + DK LPNY F Sbjct: 61 TNEEMINKIILPATDEIA-IILGTVRKDENKNLYNSAFFVYNRKIIEIFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWK------NSN----ICKHLKKQGAEFLFS 173 EKR F + F+ +++ + ICED WK N+N + + K + + Sbjct: 120 DEKRYFSPSSQIKTVEFKGVKVAVNICEDAWKGYVFEPNANYSIDVLEEQFKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPY+ K + R I+ + +P +YVNQVG DELIFDG SF + + + ++ Sbjct: 180 ISASPYHLGKHRTRLGIMKEKTDKYGIPFVYVNQVGANDELIFDGNSFVLNEKGKEVIRL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + E Q L + + + +I Y A V+ +RDY K F Sbjct: 240 KGFEEDFKVVEL---QNLEDFEELPELKEDISWI--------YKALVIGVRDYFHKLGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ A IA +ALGKENV I +P +Y+S S++DA AK LG + V+ Sbjct: 289 KAVLGLSGGIDSAVVAVIASEALGKENVLAISMPSRYSSEGSVKDAEILAKNLGIDFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 PI + + S+ ++ G VA EN+Q+RIRGN LM +N ++LTT NKSE++ Sbjct: 349 PIEPVFKSYLSVFNK--DGNALGDVAEENVQARIRGNYLMFFANREGYVVLTTGNKSELA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +GY TLYGDMSG + DLYKTQV++LA + N E+IP SI++K PSAE Sbjct: 407 MGYCTLYGDMSGSLAVIGDLYKTQVYELARYINRE---------KEIIPVSIIKKVPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP+Q D++SLPPY ILD ++K +E S ++ ++ + VR++ + + +EYKR+Q Sbjct: 458 LRPNQKDEDSLPPYRILDQVLKLYLEENASVEEIAEKGFDKDLVRHIINTVNKNEYKRKQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 AP K++ K+FG R PI F+ Sbjct: 518 APPVLKVSPKAFGIGRRMPIVQNFK 542 >gi|119490521|ref|ZP_01622963.1| NAD(+) synthetase [Lyngbya sp. PCC 8106] gi|119453849|gb|EAW35005.1| NAD(+) synthetase [Lyngbya sp. PCC 8106] Length = 569 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 220/573 (38%), Positives = 317/573 (55%), Gaps = 35/573 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP VGDI GN + A ++A G L+L TEL + GYPP DL+ + SFI+ Sbjct: 1 MKIAIAQLNPTVGDITGNAQRILDAAKQATEAGCQLLLTTELALVGYPPRDLLNRPSFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-------FPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A + + L + ++VG F +Q ++ + NS ++ + K L Sbjct: 61 AAIAELQVLAAKIPPE-LTVLVGTVQPNSEFEKQGEKPLFNSAALIQNSQVQQFFQKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNS----------NICKHL 163 P Y F E R F G + + +++G+ ICED+W + N K L Sbjct: 120 PTYDVFDEDRYFEGGKQSKYFTLSNSTSSLKIGVTICEDLWNDEEFWGRQNYTCNPMKAL 179 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 ++ + + +L+ASPY +K K R ++ PIIY NQVGG D+LIFDG S F Sbjct: 180 AEKEVDLVVNLSASPYQASKQKLRQAMLGHSAKRYSTPIIYANQVGGNDDLIFDGFSLVF 239 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSDDSASTMYIPLQEEEADYNACV 280 + +L + F + E+ +++ S W D S+ P E+E + A V Sbjct: 240 NKTGELVQYLTGFETDFTVVEFDLEKRDVITSDWVKSLDQPQSSF--PESEDEEIWLALV 297 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L +RDY++K F +V++GLSGGIDS+L AAIA +A+GKENV +++P Y+S S+ DA Sbjct: 298 LGVRDYLRKCGFSQVVLGLSGGIDSSLVAAIAAEAVGKENVLGVLMPSPYSSEHSVTDAV 357 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+ LG L I + + F ++ GI ENIQSRIRG +LMA+SN Sbjct: 358 ELAENLGINTKTLAIAEAMKAFDQVLEPVFAGTEFGIAEENIQSRIRGTLLMAISNKFGH 417 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE++VGY TLYGDM+GG + D+ K +V+ + W N H E+I Sbjct: 418 LLLSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKIRVYSICKWLNQHSN-------KEII 470 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVE 519 P +IL K SAEL+P Q D +SLPPY ILDDI+ R+VE +ES +D E V+ V Sbjct: 471 PNNILTKPASAELKPGQMDSDSLPPYEILDDILHRLVEKQESVSQIIAAGHDSEIVQQVV 530 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ +E+KRRQAP G KI+ ++FG PI+ Sbjct: 531 KLVMRAEFKRRQAPPGLKISDRAFGTGWRMPIA 563 >gi|46580021|ref|YP_010829.1| glutamine-dependent NAD+ synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|46449437|gb|AAS96088.1| glutamine-dependent NAD+ synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|311233980|gb|ADP86834.1| NAD+ synthetase [Desulfovibrio vulgaris RCH1] Length = 559 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/568 (38%), Positives = 315/568 (55%), Gaps = 31/568 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q++ VVGDI GN A+ A EA G L + EL + GYPP DL+ + F+ Sbjct: 1 MKVALLQIDTVVGDIVGNAARIADAVREAASLGARLCVTPELALCGYPPRDLLLQDDFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSV----VILDAGNIIAVRDKINLPNY 120 AC A++ L D ++VG P + V N + V+L G + K+ LPNY Sbjct: 61 ACRKALEALAQQLRDLPP-VLVGAPVPNPSPVGNPIHNCAVLLREGKVTVATRKVLLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH-----------LKKQGAE 169 F E+R F SG + R G+ ICED+W + + L GA+ Sbjct: 120 DVFDERRYFESGVGCGVVTIDGWRFGVTICEDVWNDKTFWQEHRHYENDPVADLMAGGAD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L+ASP+ K R +++ + ++Y NQVGG D+L+F G S FD L Sbjct: 180 AILNLSASPFTLGKQAVRERMLSRVAFRYRVSVLYANQVGGNDDLVFAGKSIAFDATGTL 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + + F+E M + ++ + + P +EE + A VL RDY +K Sbjct: 240 IARGRSFAEDIVMVD------------VAQATGTITAEPTSDEEQVWKALVLGTRDYARK 287 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F ++GLSGGIDSAL AA+A +ALG + V +++P ++S S+ DA A A +LG Sbjct: 288 CGFDGAVLGLSGGIDSALVAAVAAEALGPDKVLGVLMPSPHSSEGSVTDALALASSLGIA 347 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 +PI DL++ F + ++Q + + ENIQSRIRGN+LMALSN + +LLTT NKS Sbjct: 348 TCTIPIGDLMHGFEAALAQAFAGREADVTEENIQSRIRGNLLMALSNKQRRLLLTTGNKS 407 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG--LGPLTEVIPPSILEK 467 E++VGY T+YGDM+GG + DL KT V+++A W N + G E IP +IL K Sbjct: 408 ELAVGYCTIYGDMAGGLAVIADLPKTLVYRVAHWLNERDTSHGHEGREARETIPSAILTK 467 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSE 526 PSAELRP Q D +SLPPY +LD I++R+VE S + E Y+ ETVR V L+ +E Sbjct: 468 EPSAELRPGQRDSDSLPPYDVLDGILERLVELRRSAADIVAEGYDVETVRKVLRLVCNAE 527 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNK 554 +KRRQAP G K+T ++FG P++ + Sbjct: 528 FKRRQAPPGLKVTDRAFGTGWRMPVAAR 555 >gi|123969180|ref|YP_001010038.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. AS9601] gi|123199290|gb|ABM70931.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. AS9601] Length = 565 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 217/574 (37%), Positives = 321/574 (55%), Gaps = 38/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A+ D +L EL + GYP DL+ KK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILNIASKASSISADFVLTPELSLWGYPANDLLLKKNLIK 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 +D L SDT+ G I VG + + NS+ +++ G + KI LP Sbjct: 61 NQYQILDKLASDTNKKYGNLSITVGIAELINDSFFPNLYNSIALVEGGEWRIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F S ++ + RLG ICED+W N NI LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLIKKIKNQTWRLGFTICEDLWVNKNIEGRGIHRKNPIVDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG SF D Sbjct: 181 KKEVDILVNLSASPYTLKKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGNSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE ++ W +Q + + S+++ +A VL ++ Sbjct: 241 KNGSTIKQLKSFSED--LSSWEIEQTKPEKKEFKNSEMSSIF----------DALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F ++GLSGGIDSAL +AIA ALG ENV + +P K++S S DA A+ Sbjct: 289 DYAKKCRFKTALVGLSGGIDSALVSAIATAALGSENVYCVSMPSKWSSSHSKIDAKDLAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + +PI +L+N F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLKISFKSIPIENLMNSFEESFIKTIDFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-----HGITSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L +W +S H + L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCNWLDSEDSINHRKSYMLDTNVDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYV 518 I +I K+PSAEL P Q D +SLPPY ILD+I+K I+E ++ +++ Y + + + Sbjct: 469 IGKNIRTKAPSAELGPDQLDTDSLPPYSILDNILKGIIEEKKDLQQLEKDGYKKDLILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ +E+KR+QAP K++++S G D PI+ Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRVPIA 562 >gi|254424253|ref|ZP_05037971.1| NAD synthase family [Synechococcus sp. PCC 7335] gi|196191742|gb|EDX86706.1| NAD synthase family [Synechococcus sp. PCC 7335] Length = 568 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/581 (37%), Positives = 322/581 (55%), Gaps = 41/581 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP VGD++GN + A +A G DL+L EL + GYPP DL+ + SFI Sbjct: 1 MKIAIAQINPTVGDLSGNAQRILEAAIQAADLGADLVLTPELSLCGYPPRDLLMRPSFIT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPR-------QDQEGVLNSVVILDAGNIIAVRDKINL 117 + L + ++VG Q Q+ + NS+ +L +G + V K L Sbjct: 61 KTKRQAEAL-AKALPSDLSVLVGIAEDNPSAAMQGQKPIFNSMALLQSGKVKEVFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNS----------NICKHL 163 P Y F E R F SG + + I +G+ ICED+W N N + L Sbjct: 120 PTYDVFDEDRYFESGTKASSFLLQAERESIHVGVTICEDLWNNETFWGKRTYSINPTQEL 179 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 + G + + +L+ASPY + K R +++ + I+YVNQVGG D+LIFDG S F Sbjct: 180 VENGVDLVVNLSASPYVYAKQVLREDMIAHEAKQHQRAIVYVNQVGGNDDLIFDGQSVAF 239 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLS 282 + Q +L + FS + + D+Q D + + L +A+ ++A VL Sbjct: 240 NRQGELVCRAAAFSTDLKLVNFDIDKQ--------DLQPAVIETTLLAADAEIWSALVLG 291 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++DY +K F K +IGLSGGIDSAL +AIA +ALG +NV +++P Y+S S+ DA Sbjct: 292 VKDYARKCGFRKAVIGLSGGIDSALVSAIAAEALGPQNVLGVLMPSPYSSKHSISDAEQL 351 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK +G + +PI L++ + + + S + EN+QSRIRGN+LMA+SN +L Sbjct: 352 AKNIGIPTETIPIGQLMSGYEKTLDDLFKGTESDVTEENLQSRIRGNLLMAVSNKFGHLL 411 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 LTT NKSE++VGY TLYGDM+GG + D+ KT+V+ + W N +IP Sbjct: 412 LTTGNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSICRWLNRK---------QALIPN 462 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHL 521 +I+ K PSAEL+P Q DQ+SLP Y ILDDI++R+V+ ++S + + TV V L Sbjct: 463 NIITKPPSAELKPGQVDQDSLPDYEILDDILERLVQKQQSADDIVAAGHPAATVEKVVRL 522 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 + SE+KRRQ P K+T ++FG PI++++ +S E Sbjct: 523 VTRSEFKRRQTPPVLKVTDRAFGMGWRMPIASQWSLELSAE 563 >gi|20807133|ref|NP_622304.1| NAD synthase [Thermoanaerobacter tengcongensis MB4] gi|20515628|gb|AAM23908.1| NAD synthase [Thermoanaerobacter tengcongensis MB4] Length = 543 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 215/565 (38%), Positives = 323/565 (57%), Gaps = 36/565 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI N K + E+A ++ DL++F EL GYPP+D +F K FI+ Sbjct: 1 MKIALAQINPVVGDIKHNCEKIVKYIEKAKKEKADLVVFPELSTVGYPPKDFLFVKDFIK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 I+ + D A +++G R+D+ + + NS + II + DK LPNY F Sbjct: 61 TNEEMINKIILPATDEIA-VILGTVRKDENKNLYNSAFFVYNRKIIEIFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEFLFS 173 EKR F + F+ +++ + ICED WK + ++ + K + + Sbjct: 120 DEKRYFSPSSQIKTVEFKGVKVAVNICEDAWKGYVFEPSANYSVDVLEEQFKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPY+ K + R I+ + +P +YVNQVG DELIFDG SF + + + ++ Sbjct: 180 ISASPYHLGKHRTRLGIMKEKTDKYGIPFVYVNQVGANDELIFDGNSFVLNEKGKEVIRL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + E Q L + + + +I Y A V+ +RDY K F Sbjct: 240 KGFEEDFKVVEL---QNLEDFEELPELKEDISWI--------YKALVIGVRDYFHKLGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ A IA +ALGKENV I +P +Y+S S++DA AK LG + V+ Sbjct: 289 KAVLGLSGGIDSAVVAVIASEALGKENVLAISMPSRYSSEGSVKDAEILAKNLGIDFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 PI + + S+ ++ G VA EN+Q+RIRGN LM +N ++LTT NKSE++ Sbjct: 349 PIEPVFKSYLSVFNK--DGNALGDVAEENVQARIRGNYLMFFANREGYVVLTTGNKSELA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +GY TLYGDMSG + DLYKTQV++LA + N E+IP SI++K PSAE Sbjct: 407 MGYCTLYGDMSGSLAVIGDLYKTQVYELARYINRE---------KEIIPVSIIKKVPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP+Q D++SLPPY ILD ++K +E S ++ ++ + VR++ + + +EYKR+Q Sbjct: 458 LRPNQKDEDSLPPYRILDQVLKLYLEENASVEEIAEKGFDKDLVRHIINTVNKNEYKRKQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 AP +++ K+FG R PI F+ Sbjct: 518 APPVLRVSPKAFGTGRRMPIVQNFK 542 >gi|121999017|ref|YP_001003804.1| NAD+ synthetase [Halorhodospira halophila SL1] gi|121590422|gb|ABM63002.1| DNA-directed RNA polymerase, subunit H [Halorhodospira halophila SL1] Length = 538 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 221/560 (39%), Positives = 320/560 (57%), Gaps = 39/560 (6%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ++I +AQL VG + N I RAR+E G DL++F EL ++GYPP+DL+ + Sbjct: 1 MRIVVAQLPFPVGALDDNARRIIDAIGRARDEF---GADLVVFPELAVTGYPPDDLLLRS 57 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F A A+ + + G +VG P V N+ V L G + K LP+Y Sbjct: 58 DFHAAVERALARIAAACT--GVTALVGAPLHRHGVVRNAAVALADGAEVGAAYKRCLPSY 115 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F + R F +G + + R+G+ ICEDIW + + AE L S+NASP++ Sbjct: 116 SVFDDNRHFRAGDAPCLLEVAGRRIGVAICEDIWAATPAAEAAAAG-AELLVSINASPFH 174 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R + +++ +P++Y N VGG DE+++DG SF D L+ + F++ Sbjct: 175 DGKQAEREGVAARRVAETGVPLLYANLVGGHDEVVYDGGSFALDDTGALSARAPAFADGL 234 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +W Q + + A + P A Y A V + DYV+ N F V++GLS Sbjct: 235 YALDW-------QGGALHGEQAEAVEGP----PAVYQALVRATADYVRGNGFSGVVLGLS 283 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+A DALG + V +M+P +YT+ +SLEDA A A+ALG +Y +PI L Sbjct: 284 GGIDSALVAAVAADALGGDRVLAVMMPTRYTAERSLEDARAAAQALGLEYRSIPIESLFA 343 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + ENIQ+RIRGN LMALSN MLL NKSE++VGY TLYG Sbjct: 344 DYEQALAPLFAGREADATEENIQARIRGNCLMALSNKLGLMLLAAGNKSELAVGYATLYG 403 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF PLKD+YKT V++LA +RNS LGP +P +I+E+ P+AELR Q D Sbjct: 404 DMCGGFAPLKDVYKTDVYRLAEYRNS------LGP---AVPAAIIEREPTAELRADQRDS 454 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVG 535 +SLPPY +LD ++++ +E++ + + E E + VE LLY +EYKRRQA G Sbjct: 455 DSLPPYRVLDAVLRQYLEDDAA----EHEIRVEGLDAVELCRVIRLLYRNEYKRRQAAPG 510 Query: 536 TKITAKSFGRDRLYPISNKF 555 K+T ++FGRDR YPI++ + Sbjct: 511 VKVTRRAFGRDRRYPITSGW 530 >gi|326567613|gb|EGE17726.1| NAD+ synthetase [Moraxella catarrhalis 12P80B1] Length = 529 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 207/500 (41%), Positives = 288/500 (57%), Gaps = 18/500 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEIE---GIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + I + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIWHDEPI-QALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +D Q + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 R--FDTQNKTF-----DTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESF 503 Y LD I+K ++++ + Sbjct: 487 GDYETLDSILKMYIDDDLGY 506 >gi|299531605|ref|ZP_07045010.1| NAD+ synthetase [Comamonas testosteroni S44] gi|298720321|gb|EFI61273.1| NAD+ synthetase [Comamonas testosteroni S44] Length = 548 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 227/560 (40%), Positives = 326/560 (58%), Gaps = 23/560 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L I AQ N VVGD++GN+ K A EA G L+L EL + GY EDL + +F++ Sbjct: 3 LSICCAQRNFVVGDLSGNVQKIIAAAAEAYANGARLLLTPELALCGYAAEDLYLRPAFLE 62 Query: 65 ACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYS 121 AC +A+ L+ + G +V+G P++D++G + N+ +L G IA K LPN+ Sbjct: 63 ACDAALQQLQQASAQWPGLALVIGHPQRDEQGEKLFNAASVLRDGQQIARYFKQLLPNFG 122 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E+R F +G + I++G+LICED W GA+ L +NASP++ Sbjct: 123 VFDEQRYFAAGEESCVFELEGIQIGLLICEDAWHAGPA-HAAVAAGAQLLLVINASPFHS 181 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++ + +P++YV+ VGGQDE++FDG SF Q+A + F E+ Sbjct: 182 GKPLEREAVIAQRAVENAVPLVYVHLVGGQDEVVFDGCSFAVQADGQVAARAAAFEEELP 241 Query: 242 MTEWHYDQQLSQWNYMSDDSASTM---YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 M + D + M L A ++A VLS+RDYV KN F +IG Sbjct: 242 MVA----------ALLVDGCVTLMGQVKPQLNHHHALWSALVLSVRDYVGKNRFPGALIG 291 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGG+DSAL AIAVDALG + V+T+M+P YT+ S DA ++ +G +++ + I Sbjct: 292 LSGGMDSALVLAIAVDALGADKVRTVMMPSPYTADISWLDAREMSERVGVQHEEIDIAPQ 351 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + ++ EN+Q+RIRG +LMA+SN +++LTT NKSE+S GY TL Sbjct: 352 FEAFKAALAGTFAGRAEDTTEENLQARIRGTLLMAMSNKFGSIVLTTGNKSEMSTGYCTL 411 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 YGDM+GGF +KD++KT+VF LA WRN++ +GL P IP I+ + PSAELRP Q Sbjct: 412 YGDMAGGFAVIKDVFKTEVFALARWRNANDPFGTGLDP----IPERIITRPPSAELRPDQ 467 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+SLP Y +LD I+ R +EN ES + E + V V L+ +EYKRRQAPVG Sbjct: 468 KDQDSLPDYEVLDAIVSRYMENNESISSIVAEGFAPADVERVTRLIQINEYKRRQAPVGP 527 Query: 537 KITAKSFGRDRLYPISNKFR 556 ++T +SFG+D YPI+NKFR Sbjct: 528 RLTMRSFGKDWRYPITNKFR 547 >gi|299137866|ref|ZP_07031047.1| NAD+ synthetase [Acidobacterium sp. MP5ACTX8] gi|298600507|gb|EFI56664.1| NAD+ synthetase [Acidobacterium sp. MP5ACTX8] Length = 562 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 213/576 (36%), Positives = 318/576 (55%), Gaps = 43/576 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NP VGD +GN+ K R E A Q DL++F EL I GYPP DL+ K+SF++ Sbjct: 1 MRIALAQINPTVGDFSGNLQKIREFTECAVAQRADLVIFPELAICGYPPADLLEKESFVK 60 Query: 65 ACSSAIDTLKSDTHDGG-----AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +++ + + T G G + + + V N +L+AG I +++ K+ LP Sbjct: 61 RAEASLAEVAALTKGEGRPAILCGAALSVAQPTGKHVRNVAALLEAGEIRSLQQKMLLPF 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW--------KNSNI--CKHLKKQ--- 166 Y F E+R F V + + + +CED W +N ++ + L KQ Sbjct: 121 YDVFDEQRYFEPATHQSLAVVKGQAVALTVCEDAWNDKVFWPRRNYSVDPVEELMKQWAV 180 Query: 167 ------GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 G + +++ASPY+H K++ R ++ H ++ VNQVG D L+FDG S Sbjct: 181 LPQPLGGQRLILNISASPYWHGKVEVRQRMIGALAKRHHATVVLVNQVGANDSLVFDGNS 240 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F ++ Q + F+E + + D + + + A+T + + A V Sbjct: 241 FVAGPDGEIVAQARGFAED--LVIFDTDSAPVKVASVPETDAAT------QTSLTWQALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L RDYV+K F K ++GLSGGIDSAL AAIAV+ALG ENVQ I +P +++S S+ DA Sbjct: 293 LGTRDYVRKCGFKKALLGLSGGIDSALVAAIAVEALGAENVQGIGMPSEFSSTGSVSDAE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+ LG + V+P+ ++ F + F G+ EN+Q RIRG++LMALSN + A Sbjct: 353 KLAQNLGIAFSVVPVREIYTQFSDSLQPFFAGTSFGLAEENLQPRIRGSLLMALSNKTGA 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++LTT NKSE++ GY TLYGDM G + D+YKT+V+ L+ + N E+I Sbjct: 413 LVLTTGNKSEMATGYCTLYGDMVGALAVIGDVYKTEVYALSHYANRE---------REII 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYV 518 P L K PSAELRP Q D +SLPPY +LD I++ +E+ S I Q ++ VR V Sbjct: 464 PEDTLTKPPSAELRPGQKDTDSLPPYEVLDPILRAYIEDYVSAEEIAAKQGVDENLVRSV 523 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 L+ SEYKR+QA K++ KSFG R +PI+ K Sbjct: 524 IQLVERSEYKRQQAAPVLKVSKKSFGMGRRFPIAAK 559 >gi|329934914|ref|ZP_08284955.1| carbon-nitrogen ligase [Streptomyces griseoaurantiacus M045] gi|329305736|gb|EGG49592.1| carbon-nitrogen ligase [Streptomyces griseoaurantiacus M045] Length = 586 Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 218/599 (36%), Positives = 319/599 (53%), Gaps = 56/599 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNI-AKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 + +L++A+ Q++ VGD++GN+ A RR RE A R G L+ F E+ ++GYP EDL + Sbjct: 1 MPQLRLALNQIDSTVGDLSGNVEAVLRRTRECAER-GAHLVAFPEMVLTGYPVEDLALRS 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGN 107 SF++A +A+ L G G ++VG+ P+ Q N+ +L G Sbjct: 60 SFVEASRAAVRELAVRLAAEGLGELPVLVGYLDRSESAQPKYGQPAGTPRNAAAVLYRGR 119 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 I K +LPNY F E R F+ G + + + + + ICED+W++ + Sbjct: 120 IALRFAKHHLPNYGVFDEFRYFVPGDTMPVLRLHGVDIALAICEDLWQDGGRVPAARSSR 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 A L S+NASPY +K R E+V + Y+ GGQDEL+FDG + D + Sbjct: 180 AGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMTGGQDELVFDGDTIVVDREG 239 Query: 228 QLAFQMKHFSEQNFMTEWHY--------------DQQLSQWNYMSDDSASTMYIP----- 268 ++ + F E + + D L + + Y P Sbjct: 240 EVVSRAPQFQECAVLLDLDLPGVSAEAPDDGAVLDDGLRVERLVVSEEPLPAYEPELTGG 299 Query: 269 ----LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 L+++E Y+A V LR Y +KN F V+IGLSGGIDSAL AAIA DA+G ENV + Sbjct: 300 YADRLEDDEEIYSALVTGLRAYARKNGFRSVLIGLSGGIDSALVAAIACDAVGPENVYGV 359 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 +P KY+S S DAA A+ G + + I + + + + E +G+ EN+QS Sbjct: 360 SMPSKYSSEHSRGDAAELARRTGLNFRTISIAPMFDAYMA------STELTGLAEENLQS 413 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R+RG +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WR Sbjct: 414 RLRGTLLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTTVFELARWR 473 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF- 503 N G P IP + + K PSAELRP Q D +SLP YP+LD I+ R V+ ++ Sbjct: 474 NRAAAERGETP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILARYVDRDQGAD 530 Query: 504 ----INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 ++E +T+R V+ +EYKRRQ P GTKI+AK FG+DR PI+N +R+ Sbjct: 531 EIVEAGFERELVVKTLRMVDT----AEYKRRQYPPGTKISAKGFGKDRRLPITNAWRER 585 >gi|328881984|emb|CCA55223.1| NAD synthetase or Glutamine amidotransferase chain of NAD synthetase [Streptomyces venezuelae ATCC 10712] Length = 609 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 218/593 (36%), Positives = 310/593 (52%), Gaps = 48/593 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGDIAGN A QG L+ F E+ ++GYP EDL + S Sbjct: 25 VPQLRLALNQIDSTVGDIAGNAEAIVHWTRHAAGQGAHLVAFPEMALTGYPVEDLALRSS 84 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEG----------VLNSVVILDAGNI 108 F++A +A+ L D G G +VVG+ + + N+ +L G + Sbjct: 85 FVEASRAALRGLARRLADEGFGEVPVVVGYLDRSERAEPKLGLPAGSPENAAAVLHRGEV 144 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + I + + ICED+W+ + A Sbjct: 145 VLRFAKHHLPNYGVFDEYRYFVRGDTMPVLRVHGIDVALAICEDLWQEGGRVPAARHARA 204 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY NK R E+V + Y+ GGQDEL+FDG S D + Sbjct: 205 GLLLSVNASPYERNKDDTRLELVRKRAQEAGCVTAYLASTGGQDELVFDGDSIVVDAAGE 264 Query: 229 LAFQMKHFSEQNFM------------TEWHYDQQLSQWNYMSDDSASTMYIP-------- 268 + + F E + + E + L+ + + Y P Sbjct: 265 VIARAPQFVEGSVILDLELPAADPEAPEGLVNDGLTVDRVVVSEEPLPAYEPELTGGYAH 324 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L++EE Y+A V+ LR YV KN F V++GLSGGIDSAL AAIA DALG ENV + +P Sbjct: 325 RLEDEEEVYSALVIGLRAYVAKNGFRSVLVGLSGGIDSALVAAIACDALGAENVYGVSMP 384 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G Y + I + + + + +G+ EN+QSR+R Sbjct: 385 SKYSSDHSRGDAAELARRTGLHYRTVSIEPMFDAYMGSLGL------TGLAEENLQSRLR 438 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMALSN ++L NKSE++VGY TLYGD G F P+KD+YK+ VF+LA WRN Sbjct: 439 GTTLMALSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAFGPIKDVYKSTVFRLARWRNRA 498 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFI 504 G P IP S + K PSAELRP Q D +SLP Y LD ++ V+ + E + Sbjct: 499 AEERGQTP---PIPESSISKPPSAELRPGQVDTDSLPDYDTLDAVLALYVDQDRGREEIV 555 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 Y++E V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 556 AAG--YDEELVTRTLRMVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWRE 606 >gi|206895237|ref|YP_002247148.1| glutamine-dependent NAD(+) synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206737854|gb|ACI16932.1| glutamine-dependent NAD(+) synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 570 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 202/576 (35%), Positives = 317/576 (55%), Gaps = 40/576 (6%) Query: 5 LKIAIAQLNPVVGDIAGN---IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KI +AQ+NP VGD GN I A A +EA ++++F EL ++GYPPEDL+F + Sbjct: 1 MKIGLAQINPKVGDFNGNKQKILHALDALKEA-----EIVVFPELALTGYPPEDLLFNRD 55 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+Q A+ + +++G P ++ + NS +++ G I+ K+ LPNY Sbjct: 56 FLQQSQQALREIARSVPRNQV-VILGAPEKEGTDLYNSAFLINGGEIVGSHRKVLLPNYD 114 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F +G + + F + +G+++CED+W + G L S+NASPY H Sbjct: 115 VFDEMRYFKAGTTGTVLRFSNTSVGVVVCEDLWHPDGPAQWAAASGLSTLISINASPYEH 174 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 KL R ++ +++ I+YVN VGG+DEL+FDGAS L + F E Sbjct: 175 KKLNNRLNLLKHLAKSLNVNIVYVNMVGGEDELLFDGASLVVLNNGDLICSLPFFEESLC 234 Query: 242 MTEW--------------HYDQQLSQWNYMSDDS--------ASTMYIPLQEEEADYNAC 279 + + +++ ++ +S D+ A + IP + Y Sbjct: 235 VADLPVTLKENVTAVLSSKLEEEETKVKTISIDAVVSDSTQVAQKVMIPEDDIANLYKGL 294 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V ++ DYV K F VI+ +SGGIDSAL A ++VDALG + V+ I LP ++ P+S EDA Sbjct: 295 VFAISDYVHKQGFKGVIVPVSGGIDSALVATLSVDALGPDKVKLIYLPTRFNRPESFEDA 354 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A LGC V+ I ++ + ++ + Q++ + EN+Q+RIR NI LSN + Sbjct: 355 NLLATNLGCTLSVIEIDHILQTYEEVLREKFQKQTFDVADENLQARIRANIAFYLSNMTG 414 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++++ SNKSE +VGYGT+YGDM+GGF P++D++KTQV+ LA +RNS + V Sbjct: 415 YLVMSCSNKSESAVGYGTIYGDMAGGFAPIRDVFKTQVYALARYRNS---------MKPV 465 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 IP L + PSAEL +Q DQ+ LPPY +LD +++ V + F ++Y +E V Sbjct: 466 IPERTLMREPSAELNVNQKDQDVLPPYEVLDPLLEDYVVDNLPFAELARKYGEEITSKVL 525 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ SE+KR+Q PV K++ ++FG+ PI N F Sbjct: 526 RMVKSSEFKRKQTPVAPKVSRRNFGKGWRMPIVNGF 561 >gi|291456551|ref|ZP_06595941.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium breve DSM 20213] gi|291381828|gb|EFE89346.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium breve DSM 20213] Length = 565 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 224/580 (38%), Positives = 321/580 (55%), Gaps = 39/580 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A + +F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGDAQVAVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F QA + L D G G +VVG D+E N +V+L G + DK Sbjct: 61 FRQAAWDKANELAGQLQDEGLGHLFVVVGTVGTDRETSKPRNRLVVLHEGVVWTGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGNRSVTLEVNGTTIGVAICEDIWQDGGPVAELATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPLIYLNQVGGQDDLVFDGGSFVVDADGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W +D + ST+ L +E Y ACVL L+DY+ KN+F+ V Sbjct: 241 MED--LTFWDFDAAADH------QTKSTIVAELDPDEEVYTACVLGLKDYMAKNHFNGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLAANIGAHYEVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PL---FVAYQQQL---DLDGVAAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI----------------TSGLGPLTE-- 458 T+YGD GG+ P+KDL KT+V++++ WRN +G+ PL Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEEGNAGI-PLKNGV 465 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRY 517 +IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + DE TV Sbjct: 466 MIPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDEATVDT 525 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 526 VMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|86604930|ref|YP_473693.1| NAD+ synthetase [Synechococcus sp. JA-3-3Ab] gi|86553472|gb|ABC98430.1| NAD+ synthetase [Synechococcus sp. JA-3-3Ab] Length = 556 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 226/575 (39%), Positives = 314/575 (54%), Gaps = 49/575 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ QLN VGD++GN + R A E G +L + +EL + GYPP DL+ + I+ Sbjct: 1 MKVALLQLNYTVGDLSGNAERIRAAVEAVAAAGAELAITSELALLGYPPRDLLLYPALIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + L + + +VVG P + + N+ L+ G I K LP Y Sbjct: 61 RVGQVLQQLAARLRES-IPVVVGSVQPNPLPEGRPLYNAAAWLEGGQIRHWFQKSLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH----------LKKQGAEF 170 F E R F G PI +R R+G ICEDIW + + +H + + GA+ Sbjct: 120 DVFDEDRYFEPGSPPQPIEYRSRRVGFTICEDIWNDRDFWQHRRYHRDPVEEMARCGADV 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVH-LPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L +L+ASP+ K K R +++ G ++ H LPI+YVNQVGG D+LIFDGAS D + ++ Sbjct: 180 LINLSASPFSLGKQKLRVQML-GSLARKHALPILYVNQVGGNDDLIFDGASCALDCRGRV 238 Query: 230 AFQMKHFSEQNFMT---------EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 Q F M E + Q S+W P + E Y A V Sbjct: 239 VAQAAAFQPDCLMVDVEALVHPPEEGPEVQGSRW-------------PAEPEAELYEALV 285 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L RDYV K F +V++GLSGGIDSA+ A IA DALG E V +++P Y+SP SL DA Sbjct: 286 LGTRDYVSKCGFREVLLGLSGGIDSAVTAVIAADALGPERVLGVLMPSPYSSPGSLTDAY 345 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+ LG LPI ++ + L+++ P I EN+QSRIRG +LMALSN Sbjct: 346 QLAQNLGIPTLKLPIQSIMESYQHLLAEPFAGLPPDITEENLQSRIRGTLLMALSNKFGR 405 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LLTT NKSE++VGY T+YGDMSGG + D+ KT V++LA W N H E I Sbjct: 406 LLLTTGNKSELAVGYCTIYGDMSGGLAVISDVPKTWVYRLARWINRH---------QERI 456 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVE 519 P IL K PSAELRP Q D +SLPPY +LD I++R +E +S Q + +TV+ V Sbjct: 457 PLPILTKPPSAELRPGQKDSDSLPPYDLLDAILQRHIEQHQSAGELVAQGFEPDTVQQVL 516 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 HL+ +E+KR QAP G ++T ++FG PI+ + Sbjct: 517 HLVQSAEFKRHQAPPGLRVTDRAFGTGWRMPIAKR 551 >gi|302869087|ref|YP_003837724.1| NAD+ synthetase [Micromonospora aurantiaca ATCC 27029] gi|315504440|ref|YP_004083327.1| nad+ synthetase [Micromonospora sp. L5] gi|302571946|gb|ADL48148.1| NAD+ synthetase [Micromonospora aurantiaca ATCC 27029] gi|315411059|gb|ADU09176.1| NAD+ synthetase [Micromonospora sp. L5] Length = 586 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 229/601 (38%), Positives = 331/601 (55%), Gaps = 62/601 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q+NP VGD+AGN R +A G L+LF EL ++GYP EDLVF++S Sbjct: 1 MPTLRLALCQVNPTVGDLAGNAGLVRSWTRQAADAGAQLVLFPELMLTGYPVEDLVFRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-----PRQ---DQE---GVLNSVVILDAGN 107 F+ A +A+ L +D G G ++VG+ P Q D E G N+ +L G Sbjct: 61 FVAASRAALHRLAADLAADGLGDLPVLVGYLDADGPPQVSSDAEPGRGARNAAAVLHRGE 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 ++A K +LPNY F E R F+SG + + + + + ICED+W+ ++ G Sbjct: 121 VVATYFKHHLPNYGVFDEDRYFVSGDTLTVVRVGGVDVALTICEDLWQAGGPFAVAREAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + S+N SPY NK R +V + + I YVN VGGQDEL++DG S Sbjct: 181 VGLVLSINGSPYELNKDDVRLPLVRRRAAEAGAAIAYVNMVGGQDELVYDGDSMVVAADG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---ASTMYI----------------- 267 L + F E + +D +L + A M + Sbjct: 241 TLLTRAPQFVEHLLV----HDLELPAATGAPGGTVAPADGMRVARHEIPAIPAAPSGPAA 296 Query: 268 ------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 P+ +E ++A VL LRDY+ KN F V++GLSGGIDSA+ AAIAVDA+G E V Sbjct: 297 DGGIIEPVADEAEVWHALVLGLRDYIDKNRFPSVVLGLSGGIDSAVAAAIAVDAVGPERV 356 Query: 322 QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + +P +++S S DA AK G Y V PI +V+ F + MS SG+ EN Sbjct: 357 VGVSMPSQHSSEHSRTDAEDLAKRTGLDYRVEPIQPMVDTFLANMSL------SGVAVEN 410 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +Q+R+RG ILMALSN ++LTT NKSE++VGY TLYGD GG+NP+KD++KT V++LA Sbjct: 411 LQARVRGVILMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGYNPVKDVWKTLVWRLA 470 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE- 500 WRN+ + G P IP + + K PSAEL P Q D ++LP Y +LD I+ V+ + Sbjct: 471 KWRNTDAVRRGQTP---PIPENSIGKPPSAELSPGQLDSDTLPDYDVLDPILIGYVDGDL 527 Query: 501 --ESFI--NNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + + +D D+ +R V+ +EYKRRQ+ GTKI+ K+FGRDR PI+N++R Sbjct: 528 GRDGLVESGHDPAVVDKVLRMVDT----AEYKRRQSAPGTKISMKAFGRDRRLPITNRWR 583 Query: 557 D 557 + Sbjct: 584 E 584 >gi|283851424|ref|ZP_06368705.1| NAD+ synthetase [Desulfovibrio sp. FW1012B] gi|283573162|gb|EFC21141.1| NAD+ synthetase [Desulfovibrio sp. FW1012B] Length = 587 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 221/590 (37%), Positives = 312/590 (52%), Gaps = 53/590 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++A+ Q+NP VGD+ GN AK E A R G ++++F E+ +SGYPPEDL+ K Sbjct: 1 MAAFRLALCQINPTVGDVDGNTAKILAHLESARRAGAEMVVFPEMAVSGYPPEDLLIKPD 60 Query: 62 FIQAC-SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ AC A + +++ T G +V G P D + ++N+ ++ G + K LPNY Sbjct: 61 FLDACMDRAGEIIRAST---GLTVVFGCPWLDGD-LVNAAIVAHDGRAAGLTAKRYLPNY 116 Query: 121 SEFHEKRTFISG-----YSNDPIVFRDIRLGILICEDIW-KNSNICKHLKKQGAEFLFSL 174 F E R F +G Y D VF G+ +CEDIW + GA L ++ Sbjct: 117 GVFDENRYFAAGRGSAVYDRDGFVF-----GVSVCEDIWYPGGPPSEQAHGGGARLLVNI 171 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 +ASPY+ K R ++ + S + Y N VGGQDEL+FDG S F L + + Sbjct: 172 SASPYHGGKGLGRERMLATRASDNGTFVAYANLVGGQDELVFDGHSLVFGPDGTLLARGR 231 Query: 235 HFSEQNFMTEW----------------HYDQQLSQWNYMSDDSASTM----------YIP 268 F E + + ++ QL D P Sbjct: 232 QFEEDLVVCDLDPGAPTRMRLLDPRSRKWEPQLESCPVRVDLPPLAAPARPPLPGCPVAP 291 Query: 269 L--QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 L EEA Y A VL+ RDYV+K+ F V +GLSGGIDS+L A IA DALG ENV + + Sbjct: 292 LCGSVEEA-YRALVLATRDYVRKSGFSAVAMGLSGGIDSSLTAVIAADALGPENVMGVAM 350 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +++S SLEDA A A+ LG V+ I ++ F ++ + P + EN+Q RI Sbjct: 351 PTRFSSDDSLEDAEALAEKLGITLHVVAIENIFKAFLEALAPLFGDRPFDVAEENLQPRI 410 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMALSN ++LTT NKSE+ VGY TLYGD +GG+ +KD+ KT V+ L+ WRN Sbjct: 411 RGTLLMALSNKLGRLVLTTGNKSEVGVGYSTLYGDTAGGYAVIKDVPKTLVYALSRWRNE 470 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 T++IP +L K P+AELRP+Q D +SLP Y +LD ++K VE S Sbjct: 471 QAG-------TDLIPERVLVKPPTAELRPNQKDSDSLPEYDVLDPVLKAYVELSLSPTAM 523 Query: 507 DQEYNDETV-RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 D V V L+ +EYKRRQ+P G KIT ++FG+D PI N++ Sbjct: 524 AGAGMDPAVIDRVTKLVDRNEYKRRQSPPGPKITPRAFGKDWRLPIVNRY 573 >gi|225872337|ref|YP_002753792.1| NAD+ synthetase [Acidobacterium capsulatum ATCC 51196] gi|225793431|gb|ACO33521.1| NAD+ synthetase [Acidobacterium capsulatum ATCC 51196] Length = 552 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 218/566 (38%), Positives = 302/566 (53%), Gaps = 33/566 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP VGD GN+ K A G L +F EL + GYPP DL+ K SF+ Sbjct: 1 MKIALAQINPTVGDFHGNVQKILDFTRRAADAGAHLAIFPELAVCGYPPADLLEKPSFVA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 C AI + +T ++ G+ P + V+NS +L G++ V+ K+ LP Y Sbjct: 61 RCEEAIAHIAHETASLRIAVLCGYVTPAPHGSGKHVMNSAALLSEGHVEFVQSKMLLPFY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH----------LKKQGAEF 170 F E+R F F + I ICED W + + +H L + GA Sbjct: 121 DVFDEQRYFAPARHQQICHFHGQSIAITICEDAWNDKSFWEHRRYSVDPIEELTRHGASV 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +L+ASPY+ K R ++ +LP++ VNQVGG D L+FDG S ++ Sbjct: 181 ILNLSASPYWRGKRTTRQHMLANIARQHNLPVVMVNQVGGNDSLVFDGTSIALAPDGRVC 240 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 Q + F E + +D + Q D A T + A +A L RDYV+K Sbjct: 241 AQARSFEEDLVL----FDTETLQ----GDLHAVTGPSEDDKTAALLDALTLGTRDYVRKC 292 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++GLSGGIDSAL AAIAV ALG ENV +P ++S S++D+ A LG + Sbjct: 293 GFSRVVVGLSGGIDSALVAAIAVRALGAENVHGYGMPSAFSSQGSIDDSRQLAAHLGIGF 352 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 DVLPIH L + ++ + ENIQSRIRG +LMA+SN A++LTT NKSE Sbjct: 353 DVLPIHGLYEKYLETLAPVFAGLKPDVTEENIQSRIRGALLMAVSNKRNALVLTTGNKSE 412 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +S GY TLYGDM G + D+ KTQV+ L + N E+IP +IL+K PS Sbjct: 413 MSTGYCTLYGDMVGALAVIGDVVKTQVYALCRYLNRE---------QEIIPHAILDKPPS 463 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLYGSEYK 528 AELRP Q D ++L PY LD I++ VE ES I Q + TVR V ++ +EYK Sbjct: 464 AELRPDQKDTDTLLPYDQLDPIVEAYVERYESAERIAASQNIDLATVRTVIRMIERAEYK 523 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNK 554 R+QA K+T K+FG R +PI+ K Sbjct: 524 RQQAAPVLKVTPKAFGLGRRFPIAVK 549 >gi|264677785|ref|YP_003277691.1| NAD+ synthetase [Comamonas testosteroni CNB-2] gi|262208297|gb|ACY32395.1| NAD+ synthetase [Comamonas testosteroni CNB-2] Length = 535 Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 219/549 (39%), Positives = 323/549 (58%), Gaps = 23/549 (4%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 +GD++GN+ K A EA G L+L EL + GY EDL + +F++AC +A+ L+ Sbjct: 1 MGDLSGNVQKIIAAAAEAYANGARLLLTPELALCGYAAEDLYLRPAFLEACDAALQQLQQ 60 Query: 76 DTHDG-GAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG 132 + G +V+G P++D++G + N+ +L G IA K LPN+ F E+R F +G Sbjct: 61 ASAQWPGLALVIGHPQRDEQGEKLFNAASVLRDGQQIARYFKQLLPNFGVFDEQRYFAAG 120 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVT 192 + I++G+LICED W ++ + GA+ L +NASP++ K +R ++ Sbjct: 121 EKSCVFELDGIQIGLLICEDAW-HAGPARAAVAAGAQLLAVINASPFHSGKPLEREAVIA 179 Query: 193 GQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLS 252 + +P++Y + VGGQDE++FDG SF D Q++ + F E+ M Sbjct: 180 QRAMENAVPLVYAHLVGGQDEVVFDGCSFAVDASGQVSARAAAFEEELPMVAAQ------ 233 Query: 253 QWNYMSDDSASTM---YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 + D + M L A ++A VLS+RDYV KN F +IGLSGG+DSAL Sbjct: 234 ----LVDGCVTLMGQVKPQLNHHHALWSALVLSVRDYVGKNRFPGALIGLSGGMDSALVL 289 Query: 310 AIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 AIAVDALG + V+T+M+P YT+ S DA ++ +G +++ + I F + ++ Sbjct: 290 AIAVDALGADKVRTVMMPSPYTADISWLDAREMSERVGVQHEEIDIAPQFEAFKAALAGT 349 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 EN+Q+RIRG +LMA+SN +++LTT NKSE+S GY TLYGDM+GGF + Sbjct: 350 FAGRAEDTTEENLQARIRGTLLMAMSNKFGSIVLTTGNKSEMSTGYCTLYGDMAGGFAVI 409 Query: 430 KDLYKTQVFQLASWRNSHG-ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPI 488 KD++KT+VF LA WRN++ +GL P IP I+ + PSAELRP Q DQ+SLP Y + Sbjct: 410 KDVFKTEVFALARWRNANDPFGTGLDP----IPERIITRPPSAELRPDQKDQDSLPDYEV 465 Query: 489 LDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDR 547 LD I+ R +EN ES + E + V V L+ +EYKRRQAPVG ++T +SFG+D Sbjct: 466 LDAIVSRYMENNESISSIVAEGFAPADVERVTRLIQINEYKRRQAPVGPRLTMRSFGKDW 525 Query: 548 LYPISNKFR 556 YPI+NKFR Sbjct: 526 RYPITNKFR 534 >gi|227546012|ref|ZP_03976061.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227213646|gb|EEI81495.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 565 Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 223/581 (38%), Positives = 326/581 (56%), Gaps = 41/581 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKV 295 E +T W +D ++ A +P L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSA-------AEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGV 291 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 292 TLGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPI 351 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 L N + Q + GI AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 352 EPLFNAYQQ------QLDLDGISAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGY 405 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI----------------TSGLGPLTE- 458 T+YGD GG+ P+KDL KT+V++++ WRN +G+ PL + Sbjct: 406 STIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGI-PLKDG 464 Query: 459 -VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVR 516 +IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + D+ TV Sbjct: 465 VMIPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVD 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 525 TVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|114778174|ref|ZP_01453061.1| NAD(+) synthetase [Mariprofundus ferrooxydans PV-1] gi|114551592|gb|EAU54146.1| NAD(+) synthetase [Mariprofundus ferrooxydans PV-1] Length = 509 Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 213/535 (39%), Positives = 304/535 (56%), Gaps = 37/535 (6%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 +A + DL++ EL ++GYPPEDL+ + SF+ +A+D + + + +V G PR+ Sbjct: 3 QAEAKLCDLVVLPELVVTGYPPEDLLLRPSFMDEVDAAVDAIIKASRN--TCVVFGSPRR 60 Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGIL 148 + + NSV + G ++ + DK LPNY F E R F G + +F D+ R+G+ Sbjct: 61 FGKVLRNSVFLAQHGKLLGIYDKQFLPNYGVFDECRYFEPG-DGEQCLF-DVNAWRVGVG 118 Query: 149 ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQV 208 +CED+W + + + + +LNASP++ K +R +V + P++YVN V Sbjct: 119 VCEDLWHDELALRQ-QSMCCDVWLNLNASPFHVGKQSEREALVRRRAISFSTPLVYVNPV 177 Query: 209 GGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP 268 GGQDE++FDG S D L + F + + + Q T P Sbjct: 178 GGQDEIVFDGGSHVVDAAGHLIMRAPLFECRGTVVDLAAVGQ-------------TDIAP 224 Query: 269 LQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L E A Y A V + DYV +N H+V+IGLSGGIDSAL AAIAVDALG NV ++LP Sbjct: 225 LSESLAQMYQALVTGVSDYVLRNGCHQVVIGLSGGIDSALTAAIAVDALGAANVLGVLLP 284 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL----QEEPSGIVAENIQ 383 +Y+S SL DA A + LG LPI V+ ++++ + EP + ENIQ Sbjct: 285 SRYSSDHSLADATALVENLGMDAITLPIAAGVDTVEQILAETFAGWGKSEPD-VTEENIQ 343 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R+RG +LMA+SN + M+LTT NKSE++VGY TLYGDM+GGF LKD+YKT+VF L W Sbjct: 344 ARMRGLLLMAISNKTGRMVLTTGNKSEMAVGYATLYGDMAGGFAVLKDVYKTEVFALCRW 403 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 N +EVIP + + K PSAELRP Q D +SLP Y +LD I+ +E Sbjct: 404 LNRD---------SEVIPENTITKPPSAELRPDQKDSDSLPDYDVLDAILTASIEERLGV 454 Query: 504 IN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + Y+ V+ V +L +EYKRRQAP G KIT ++FGRDR YPI++ FR+ Sbjct: 455 DEIAARGYDKAEVKRVVRMLQLAEYKRRQAPPGVKITERAFGRDRRYPITHGFRE 509 >gi|317482298|ref|ZP_07941319.1| NAD synthase [Bifidobacterium sp. 12_1_47BFAA] gi|316916314|gb|EFV37715.1| NAD synthase [Bifidobacterium sp. 12_1_47BFAA] Length = 565 Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 222/581 (38%), Positives = 326/581 (56%), Gaps = 41/581 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGTTIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKV 295 E +T W +D ++ A +P L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSA-------AEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGV 291 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 292 TLGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPI 351 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 L N + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 352 EPLFNAYQQ------QLDLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGY 405 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI----------------TSGLGPLTE- 458 T+YGD GG+ P+KDL KT+V++++ WRN +G+ PL + Sbjct: 406 STIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGI-PLKDG 464 Query: 459 -VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVR 516 +IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + D+ TV Sbjct: 465 VMIPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVD 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 525 TVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|291517073|emb|CBK70689.1| NAD+ synthetase [Bifidobacterium longum subsp. longum F8] Length = 565 Score = 366 bits (940), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 222/581 (38%), Positives = 325/581 (55%), Gaps = 41/581 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKNSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKV 295 E +T W +D ++ A +P L +E Y ACVL L+DY+ KN F V Sbjct: 241 MEN--LTFWDFDS-------AAEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNRFTGV 291 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 292 TLGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPI 351 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 L N + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 352 EPLFNAYQQ------QLDLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGY 405 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI----------------TSGLGPLTE- 458 T+YGD GG+ P+KDL KT+V++++ WRN +G+ PL + Sbjct: 406 STIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGI-PLKDG 464 Query: 459 -VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVR 516 +IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + D+ TV Sbjct: 465 VMIPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVD 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 525 TVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|282899433|ref|ZP_06307400.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cylindrospermopsis raciborskii CS-505] gi|281195697|gb|EFA70627.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cylindrospermopsis raciborskii CS-505] Length = 559 Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 229/567 (40%), Positives = 321/567 (56%), Gaps = 31/567 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GD+ GN K +AN + L+L EL + GYPP DL+ F++ Sbjct: 1 MKIAIAQLNPIIGDLKGNCQKILETAYQAND--VRLLLTPELSLCGYPPRDLLLNPGFVE 58 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLP 118 A ++ L + A G VV G + NSV L+ G I K LP Sbjct: 59 AMDMSLQELAQNLPPHLAVLVGTVVPNGEHHTRGGKNLFNSVAWLEKGKIQQYFHKRLLP 118 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGA 168 Y F EKR F G + + + +G+ ICED+W + N L G Sbjct: 119 TYDVFDEKRYFEPGLNPNYFTLDGVNIGVTICEDLWNDEEFWGKKCYAVNPIADLSVVGV 178 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + + +L+ASPY K K R ++ + PIIY NQVGG D+LIFDG SF + Q + Sbjct: 179 DLIVNLSASPYTVGKQKTREAMLKHTAVNFQQPIIYTNQVGGNDDLIFDGYSFAVNSQGE 238 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDY 286 + ++ + F+ + E++ Q ++ ++ DS + P+ E E + ++A VL ++DY Sbjct: 239 ILYRGQGFTPDFLIVEFN---QHTKEVELASDSDQNLITPIYESEDEEIWHALVLGVKDY 295 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K F +VI+GLSGGIDSAL AAIA ALGKENV +++P Y+S S+ DA + L Sbjct: 296 VKKCRFSQVILGLSGGIDSALVAAIATAALGKENVLGVLMPSPYSSQHSVSDALKLGQNL 355 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G K +LPI +L+ F + + GI ENIQSRIRG +LMA+SN +LL+T Sbjct: 356 GIKTQILPIGELMKSFDHTLFELFTGTEFGIAEENIQSRIRGVLLMAISNKFGYLLLSTG 415 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSEI+VGY TLYGDM+GG + D+ KT+V+ + +W N EVIP +IL Sbjct: 416 NKSEIAVGYCTLYGDMNGGLAVIADVPKTRVYSICNWLNGQN-------QQEVIPQNILT 468 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGS 525 K PSAEL+P QTDQ+SLPPY ILDDI++R++ +S +D TV V L+ GS Sbjct: 469 KPPSAELKPGQTDQDSLPPYNILDDILQRLINQHQSVEEIIAGGHDLGTVNRVIKLVAGS 528 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPIS 552 E+KRRQA G KIT ++FG PI+ Sbjct: 529 EFKRRQAAPGLKITDRAFGTGWRMPIA 555 >gi|297161112|gb|ADI10824.1| NH(3)-dependent NAD(+) synthetase [Streptomyces bingchenggensis BCW-1] Length = 585 Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 215/593 (36%), Positives = 315/593 (53%), Gaps = 45/593 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+ GN ++ QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLDGNTESIVHWTRHSSEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PR--QDQEGVLNSVVILDAGNI 108 F++A +A+ L + D G G +VVG+ PR Q N+ +L G + Sbjct: 61 FVEASRAALHALAARLEDEGFGELPVVVGYLDRSERAQPRFGQPAGAPQNAAAVLHRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 I K +LPNY F E R F+ G + I + + + ICED+W++ + GA Sbjct: 121 ILTFAKHHLPNYGVFDEFRYFVPGQTLPMIRVHGVDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDGA 240 Query: 229 LAFQMKHFSEQNFMTEWHY-------------DQQLSQWNYMSDDSASTMYIP------- 268 + + F+E + + D L + Y P Sbjct: 241 VIARAPQFAEGCVLLDLDLPAADPGTVPQGVVDDGLRIEHLTLSADPLPAYEPELAGGTA 300 Query: 269 --LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 L ++E Y A V+ LR YV KN F V+IGLSGGIDSAL AAIA DA+G +NV + + Sbjct: 301 ERLGDDEEIYTALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDAVGAQNVYGVAM 360 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +Y+S S+ DAA A+ G + +PI + + + + +G+ EN+QSR+ Sbjct: 361 PSRYSSEHSIADAAELARRTGLNFRTVPIAPMFDAYMESLHL------TGLAEENLQSRL 414 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMA+SN ++L NKSE++ GY TLYGD G + P+KD+YKT +F+LA WRN Sbjct: 415 RGTMLMAISNQEGHIVLAPGNKSELACGYSTLYGDSVGAYGPIKDVYKTSIFRLAKWRNQ 474 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN- 505 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AAEERGQTP---PIPENSITKPPSAELRPGQVDTDSLPDYDVLDQILELYVDRDQGRAEI 531 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 Y+DE V + L+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+H Sbjct: 532 VAAGYDDELVTRILRLVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWREH 584 >gi|319943881|ref|ZP_08018162.1| NAD synthetase [Lautropia mirabilis ATCC 51599] gi|319743114|gb|EFV95520.1| NAD synthetase [Lautropia mirabilis ATCC 51599] Length = 548 Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 226/562 (40%), Positives = 317/562 (56%), Gaps = 26/562 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKIA AQLN VGD+AGN + A A +G ++L EL + GY P D +F+ +F Q Sbjct: 3 LKIACAQLNQRVGDMAGNAERIIAAAARAAGEGAQVLLTPELSLCGYLPGDNLFRPAFQQ 62 Query: 65 ACSSAIDTLK-SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +A++T++ + G VVG+P + ++ + G +A K LP+Y F Sbjct: 63 QVDAAVETIRQASAEQPGLHWVVGYPVLREGRRHSAAGVFHQGRQVAEYLKAELPDYGVF 122 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F +R +L CED W + + AE + SLNASP+ K Sbjct: 123 DETRYFQPQADATVFTVAGVRCALLTCEDTWLPAAPARARTAG-AELVLSLNASPFQSAK 181 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R + + + + ++ N VGGQDEL+FDG S D Q +LA + F E + Sbjct: 182 GDLRVDTLRSNVCAQGMAVVACNLVGGQDELVFDGQSLALDAQGRLAARAPSFVEDLLLV 241 Query: 244 --EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 E D L+ A +M L+ Y A VL +RDY+ KN F V++GLSG Sbjct: 242 TVERGADGALAL--------AGSMAPALERLPEIYQALVLGIRDYIGKNGFGGVVLGLSG 293 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL A+AVDALG E V+T+M+P YT+ SL DA A LG K++VLPI + Sbjct: 294 GIDSALTLALAVDALGAERVRTVMMPSPYTADISLADAKDMAARLGVKHEVLPIAPCFDA 353 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F ++ + ENIQ+RIRG +LMA+SN + ++LTT NKSE++VGY TLYGD Sbjct: 354 FRGTLASTFAGLSEDLTEENIQARIRGTLLMAISNKTGWLVLTTGNKSELAVGYSTLYGD 413 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF PLKD+ KT V+QL++WRN+ + VIP I+ + PSAELRP QTDQ+ Sbjct: 414 MAGGFAPLKDVLKTVVYQLSNWRNTQ---------SPVIPERIITRPPSAELRPDQTDQD 464 Query: 482 SLPPYPILDDIIKRIVENEE---SFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 SLPPY +LD II+ +E + S + + + V V LL +EYKR+Q PVG ++ Sbjct: 465 SLPPYDVLDRIIQGYMEEDRPAASLVADGLPVD--AVAQVVRLLRLAEYKRQQGPVGPRV 522 Query: 539 TAKSFGRDRLYPISNKFRDHIS 560 TA++FGRD YPI++ FR+ +S Sbjct: 523 TARAFGRDWRYPITSAFREPVS 544 >gi|23336330|ref|ZP_00121552.1| COG0171: NAD synthase [Bifidobacterium longum DJO10A] gi|23465526|ref|NP_696129.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium longum NCC2705] gi|189439558|ref|YP_001954639.1| putative amidohydrolase [Bifidobacterium longum DJO10A] gi|239621932|ref|ZP_04664963.1| NAD/ synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132967|ref|YP_004000306.1| amidohydrolase [Bifidobacterium longum subsp. longum BBMN68] gi|322688881|ref|YP_004208615.1| NAD+ synthase [Bifidobacterium longum subsp. infantis 157F] gi|23326187|gb|AAN24765.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium longum NCC2705] gi|189427993|gb|ACD98141.1| Putative amidohydrolase [Bifidobacterium longum DJO10A] gi|239515123|gb|EEQ54990.1| NAD/ synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311773950|gb|ADQ03438.1| Putative amidohydrolase [Bifidobacterium longum subsp. longum BBMN68] gi|320460217|dbj|BAJ70837.1| NAD+ synthase [Bifidobacterium longum subsp. infantis 157F] Length = 565 Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 222/581 (38%), Positives = 326/581 (56%), Gaps = 41/581 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKV 295 E +T W +D ++ A +P L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSA-------AEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGV 291 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 292 TLGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPI 351 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 L N + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 352 EPLFNAYQQ------QLDLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGY 405 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI----------------TSGLGPLTE- 458 T+YGD GG+ P+KDL KT+V++++ WRN +G+ PL + Sbjct: 406 STIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGI-PLKDG 464 Query: 459 -VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVR 516 +IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + D+ TV Sbjct: 465 VMIPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVD 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 525 TVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|213692585|ref|YP_002323171.1| NAD+ synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524046|gb|ACJ52793.1| NAD+ synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458737|dbj|BAJ69358.1| NAD+ synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 565 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 221/581 (38%), Positives = 327/581 (56%), Gaps = 41/581 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F+E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDVNAAKVLDYSRKAAAGNAQVVVFSEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKV 295 E +T W +D ++ A +P L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSA-------AEHQAKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGV 291 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 292 TLGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPI 351 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 L N + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 352 EPLFNAYQQ------QLDLHGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGY 405 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI----------------TSGLGPLTE- 458 T+YGD GG+ P+KDL KT+V++++ WRN +G+ PL + Sbjct: 406 STIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGV-PLKDG 464 Query: 459 -VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVR 516 +IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + ++ TV Sbjct: 465 VMIPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQATVD 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 525 TVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|256788144|ref|ZP_05526575.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces lividans TK24] Length = 589 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 217/604 (35%), Positives = 314/604 (51%), Gaps = 65/604 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGDI GN + +G L+ F E+ ++GYP EDL + S Sbjct: 1 MPRLRLALNQIDSTVGDIDGNAESVLHWTRHSAERGAHLVAFPEMTLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F++A +A+ +L + D G G ++VG PR Q N+ +L G + Sbjct: 61 FVEASRAALRSLAARLADEGLGTVPVIVGHLDRSATAQPRYGQPAGAPQNAAAVLYGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + R + + + ICED+W++ + A Sbjct: 121 ALSFAKHHLPNYGVFDEFRYFVPGDTLPVVRVRGVDVALAICEDLWQDGGRVPAARSARA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ GGQDEL+FDG S D Sbjct: 181 GLLLSVNASPYERDKDDTRLELVRRRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGT 240 Query: 229 LAFQMKHFSEQNFM-----------------------------TEWHYDQQLSQWN-YMS 258 + + F+E + E +Q L ++S Sbjct: 241 VLARAPQFTEGCMVLDLDLPAADADPPTGVVDDGLRIDRVVLPGEAGREQPLPAGEPWLS 300 Query: 259 DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK 318 A PL ++E Y+A V LR YV KN F V+IGLSGGIDSAL A+IA DALG Sbjct: 301 GGHAE----PLDDDEEVYSALVTGLRAYVAKNGFRSVLIGLSGGIDSALVASIACDALGA 356 Query: 319 ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV 378 E+V + +P KY+S S +DAA A+ G Y + I + + + + E +G+ Sbjct: 357 EHVYGVSMPSKYSSGHSRDDAAELARRTGLHYRTVSIEPMFDAYTGAL------ELTGLA 410 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 EN+QSR+RG +LMALSN ++L NKSE++VGY TLYGD GG+ P+KD+YKT VF Sbjct: 411 EENLQSRLRGTLLMALSNQEGHLVLAPGNKSELAVGYSTLYGDSVGGYGPIKDVYKTSVF 470 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE 498 +LA WRN G P +P + + K PSAELRP Q D +SLP YP+LD I+ V+ Sbjct: 471 RLAEWRNRAARDRGRTP---PVPENSITKPPSAELRPGQVDTDSLPDYPVLDAILALYVD 527 Query: 499 NEES-----FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + D+E T+R V+ +EYKRRQ P GTKI+ K FG+DR P++N Sbjct: 528 RDRGADEIVAAGYDRELVTRTLRMVDT----AEYKRRQYPPGTKISPKGFGKDRRLPVTN 583 Query: 554 KFRD 557 ++R+ Sbjct: 584 RWRE 587 >gi|322690856|ref|YP_004220426.1| NAD+ synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320455712|dbj|BAJ66334.1| NAD+ synthase [Bifidobacterium longum subsp. longum JCM 1217] Length = 565 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 222/581 (38%), Positives = 326/581 (56%), Gaps = 41/581 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKV 295 E +T W +D ++ A +P L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDS-------AAEHQAKAEIVPELGPDEEVYTACVLGLKDYMAKNHFTGV 291 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 292 TLGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPI 351 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 L N + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 352 EPLFNAYQQ------QLDLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGY 405 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI----------------TSGLGPLTE- 458 T+YGD GG+ P+KDL KT+V++++ WRN +G+ PL + Sbjct: 406 STIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIAGNEDGNTGI-PLKDG 464 Query: 459 -VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVR 516 +IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + D+ TV Sbjct: 465 VMIPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVD 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 525 TVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|239979142|ref|ZP_04701666.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces albus J1074] gi|291451019|ref|ZP_06590409.1| NAD(+) synthase [Streptomyces albus J1074] gi|291353968|gb|EFE80870.1| NAD(+) synthase [Streptomyces albus J1074] Length = 585 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 226/596 (37%), Positives = 320/596 (53%), Gaps = 53/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNI-AKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 + +L++A+ Q++ VGD+ GN A R RE A R G L+ F E+ ++GYP EDL + Sbjct: 1 MHRLRLALNQIDATVGDLHGNADAVVHRTREAAER-GAHLVAFPEMVLTGYPVEDLALRS 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGN 107 SF++A SA+ L + D G G +VVG+ PR Q N+ +L G Sbjct: 60 SFVEASRSALVALAARLADEGLGDMPVVVGYLDRSSTAQPRYGQPAGAPQNAAAVLHGGE 119 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 ++ K +LPNY F E R F+ G + I R + + + ICED+W+ + G Sbjct: 120 VVLSFAKHHLPNYGVFDEFRYFVPGDTMPVIRVRGVDVALAICEDLWQEGGRVPAARAAG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 A L S+NASPY K R E+V + YV GGQDEL+FDG + D Sbjct: 180 AGLLLSVNASPYEREKDDTRLELVRKRAQEAGCATAYVAMTGGQDELVFDGDTIVVDASG 239 Query: 228 QLAFQMKHFSEQNFMT------------EWHYDQQLS-QWNYMSDDSAS---------TM 265 + + F+E + E D L +S + + T Sbjct: 240 AVLARAPQFTEVQLVLDLDLPAAAADAPEGTVDDGLRIDRVILSGEPVAGPGPVEYPGTT 299 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 PL ++E Y A V LR YV+KN F V+IGLSGGIDSAL AA+AVDA+G E+V + Sbjct: 300 VPPLDDDEEVYRALVTGLRAYVRKNGFRSVLIGLSGGIDSALTAALAVDAIGAEHVYGVS 359 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR Sbjct: 360 MPSKYSSEHSKDDAAELARRTGLHYRTVSIAPMFDAYMGELGL------TGLAEENLQSR 413 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +RG LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA WRN Sbjct: 414 LRGTTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKSTVFRLARWRN 473 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 G P IP + + K PSAELRP Q D +SLP Y +LD I+ R V+ +E Sbjct: 474 EVAAERGETP---PIPENSVTKPPSAELRPGQVDTDSLPDYDVLDAILARYVDRDE---G 527 Query: 506 NDQ----EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D+ ++ ETV V L+ +EYKRRQ P GTKI+AK FG+DR PI++++R+ Sbjct: 528 RDEILAAGFDPETVTRVLKLVDNAEYKRRQYPPGTKISAKGFGKDRRLPITSRWRE 583 >gi|298491871|ref|YP_003722048.1| NAD+ synthetase ['Nostoc azollae' 0708] gi|298233789|gb|ADI64925.1| NAD+ synthetase ['Nostoc azollae' 0708] Length = 557 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 227/569 (39%), Positives = 317/569 (55%), Gaps = 33/569 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI I QLNP++GD+ GN K ++A L+L EL + GYPP DL+ SF++ Sbjct: 1 MKITIVQLNPIIGDLPGNAQKILETAQQAVSANARLLLTPELSLCGYPPRDLLLNPSFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINL 117 A ++ + L D A ++VG ++ E + NS+ L+AG I K L Sbjct: 61 AMNTTLQKLAKDLPPNLA-VLVGTVVKNTEAYINGGKTLFNSIAWLEAGKIKQYFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQG 167 P Y F EKR F G + DI +G+ ICED+W + N L G Sbjct: 120 PTYDVFDEKRYFEPGLQANYFSLDDINIGVTICEDLWNDEEFWGKRSYAVNPIADLSILG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K K R ++ + P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDLIVNLSASPYTVGKQKLREAMLQHSAVNFQEPVIYTNQVGGNDDLIFDGRSFALNLQG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + K F + E+ Q+ Q +S S E+E ++A VL +RDYV Sbjct: 240 EIICRAKGFETDLLVVEFDETQRDLQLGSISPVYES-------EDEEIWHALVLGVRDYV 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 K F +V++GLSGG+DSAL AAIA ALGKENV I++P Y+S SL DA A A L Sbjct: 293 NKCRFSEVVLGLSGGVDSALVAAIATAALGKENVLGILMPSPYSSEHSLTDALALAVNLE 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K +LPI +L+ F + + + GI ENIQSRIRGN+LMA++N +LL+T N Sbjct: 353 IKTHILPIGELMQGFNNSLVELFAGTEFGIAEENIQSRIRGNLLMAIANKFGYLLLSTGN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V+ L +W N H E+IP +IL K Sbjct: 413 KSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCNWLNFHSN-------REIIPQNILTK 465 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSE 526 PSAEL+P Q DQ+SLP Y ILDDI++ +V + +S +D V V ++ +E Sbjct: 466 PPSAELKPGQVDQDSLPAYEILDDILQHLVHDHQSGEQIVASGHDSAIVNRVLQMVARAE 525 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G KIT ++FG PI+ F Sbjct: 526 FKRRQAPPGLKITDRAFGTGWRMPIARVF 554 >gi|113475647|ref|YP_721708.1| NAD synthetase [Trichodesmium erythraeum IMS101] gi|110166695|gb|ABG51235.1| NH(3)-dependent NAD(+) synthetase [Trichodesmium erythraeum IMS101] Length = 584 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 235/586 (40%), Positives = 332/586 (56%), Gaps = 40/586 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNPV+GDI+GN A ++A + L++ EL + GYPP DL+ S I+ Sbjct: 1 MKIAIAQLNPVIGDISGNAKLILDAAQKAKKLDAKLMITPELSLIGYPPRDLLIYPSLIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIV--VGFPRQ----DQEGVLNSVVILDAGNIIAVRDKINLP 118 A ++ L A +V V F Q ++ + NS V+L G I V K LP Sbjct: 61 AAVLELENLAKYLPSEIAVLVGTVTFNYQAANTGEKSLFNSAVLLTNGEIKQVFHKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRD--------IRLGILICEDIWKNSNI----------C 160 Y F E R F G + D + ++G+ ICED+W + Sbjct: 121 TYDVFDEDRYFEPGKTRDFFTLENYSNSSENLAKVGVTICEDLWNDEAFWGKRNYAYDPM 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 K L Q +F+ +++ASPY K K R ++ + +PIIYVNQVGG D+LIFDG S Sbjct: 181 KELAAQKVDFVINMSASPYQTGKQKLREAMLKHSTNCYQIPIIYVNQVGGNDDLIFDGCS 240 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F+G + ++ + F + E++ ++ +++S D S + +P E+E ++A V Sbjct: 241 VVFNGAGNVVYRAQAFETSLAVVEFNSAKK----DFISVDFKS-INLPESEDEEIWSALV 295 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L LRDYVQK F KV++GLSGGIDSAL AAIA ALGKENV I++P Y+S S++DA Sbjct: 296 LGLRDYVQKCGFSKVVLGLSGGIDSALVAAIATAALGKENVFAILMPSPYSSEHSVKDAL 355 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+ LG ++ I +L+ + + +S GI ENIQSRIRGN+LMA+SN Sbjct: 356 ELAENLGIAKQIISIENLMKDYDNSLSSLFTGTNFGIAEENIQSRIRGNLLMAISNKFGY 415 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT-----SGLGP 455 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+V+ L W N + SG Sbjct: 416 LLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVYSLCQWLNEQTVNNNKKFSGSQN 475 Query: 456 L--TE---VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEY 510 L TE +IP +IL K+PSAEL+ Q D++SLP Y +LDDI+ R+VE ES Sbjct: 476 LLMTEKQNIIPKNILTKAPSAELKEGQKDEDSLPAYEVLDDILFRLVEKCESLDKIIAAG 535 Query: 511 ND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +D E V V L+ +E+KRRQAP G KI+ ++FG PI+ K Sbjct: 536 HDLEVVNKVVKLVMRAEFKRRQAPPGLKISTRAFGTGWRMPIAKKL 581 >gi|288962507|ref|YP_003452802.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] gi|288914773|dbj|BAI76258.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] Length = 571 Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 213/568 (37%), Positives = 301/568 (52%), Gaps = 24/568 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I Q NP VG + GN RR RE+ R DL++F+E F +GYP +DLV + F + Sbjct: 9 LRIVCVQANPTVGALRGNFDIVRRKREQ-YRGKADLLVFSECFGTGYPLQDLVLRPGFRR 67 Query: 65 ACSSAIDTLKSDTH-DGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +A+D L + DGG +++G P N+ +++ + + K LPN + Sbjct: 68 DFRTALDALAAGMRGDGGPAVLIGGPLDGAALPYNAAFLIETDGSMRILLKHILPNDEVY 127 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F G P+ FR RLGI ICED W + + + L +GA+ L N S + K Sbjct: 128 DEKRVFAPGPMPSPVDFRGFRLGIAICEDFW-HGKVAQALAAEGADVLIVPNGSHFRSGK 186 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R I + LP++YVNQ+GGQD L+FDG S+ D + L F E Sbjct: 187 QAVRLAIGRRTVKATGLPVLYVNQIGGQDSLVFDGGSYVMD-RAGLVIAQAGFQE----C 241 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQ----EEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + + + + + +P E EA Y A VL LRDYV KN F V++G+ Sbjct: 242 DLDITLERGEGGGVDPRRGDVLGMPPNSYPDEPEAMYRALVLGLRDYVDKNGFPGVVLGM 301 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AA+AVDALG + V + +P +TS S+EDA A LG + +PI + Sbjct: 302 SGGIDSALSAAVAVDALGADRVLPVRMPSPHTSAASMEDAERAAALLGTRLLTVPIAPAM 361 Query: 360 NHFFSLMSQFLQE----EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 F +++ + P ENIQ+R RG LMALSN M+L+T NKSE+SVGY Sbjct: 362 EAFDRMLAPVFADLPPAAPDDTSFENIQARARGMTLMALSNRLGLMVLSTGNKSEMSVGY 421 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGDM GG++ LKD+YKT VF LA WRN+H LGP V+P I+ K PSAELR Sbjct: 422 ATLYGDMCGGYSVLKDVYKTVVFALARWRNTHVPAGLLGPHGAVMPDRIITKPPSAELRA 481 Query: 476 HQTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYVEHLLYGSEY 527 QTD+++L Y LD ++ +VE E + Q + + ++Y Sbjct: 482 GQTDEQALGAYEHLDAVLATMVEGLNGADRAAELAGAAVGQPIPTAYAERIGRMTARAQY 541 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KR Q+P G +T +++G P++N + Sbjct: 542 KRDQSPPGVVVTERTYGPGWRLPVTNHY 569 >gi|289772035|ref|ZP_06531413.1| NAD(+) synthase [Streptomyces lividans TK24] gi|289702234|gb|EFD69663.1| NAD(+) synthase [Streptomyces lividans TK24] Length = 596 Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 217/604 (35%), Positives = 314/604 (51%), Gaps = 65/604 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGDI GN + +G L+ F E+ ++GYP EDL + S Sbjct: 8 VPRLRLALNQIDSTVGDIDGNAESVLHWTRHSAERGAHLVAFPEMTLTGYPVEDLALRSS 67 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F++A +A+ +L + D G G ++VG PR Q N+ +L G + Sbjct: 68 FVEASRAALRSLAARLADEGLGTVPVIVGHLDRSATAQPRYGQPAGAPQNAAAVLYGGEV 127 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + R + + + ICED+W++ + A Sbjct: 128 ALSFAKHHLPNYGVFDEFRYFVPGDTLPVVRVRGVDVALAICEDLWQDGGRVPAARSARA 187 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ GGQDEL+FDG S D Sbjct: 188 GLLLSVNASPYERDKDDTRLELVRRRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGT 247 Query: 229 LAFQMKHFSEQNFM-----------------------------TEWHYDQQLSQWN-YMS 258 + + F+E + E +Q L ++S Sbjct: 248 VLARAPQFTEGCMVLDLDLPAADADPPTGVVDDGLRIDRVVLPGEAGREQPLPAGEPWLS 307 Query: 259 DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK 318 A PL ++E Y+A V LR YV KN F V+IGLSGGIDSAL A+IA DALG Sbjct: 308 GGHAE----PLDDDEEVYSALVTGLRAYVAKNGFRSVLIGLSGGIDSALVASIACDALGA 363 Query: 319 ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV 378 E+V + +P KY+S S +DAA A+ G Y + I + + + + E +G+ Sbjct: 364 EHVYGVSMPSKYSSGHSRDDAAELARRTGLHYRTVSIEPMFDAYTGAL------ELTGLA 417 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 EN+QSR+RG +LMALSN ++L NKSE++VGY TLYGD GG+ P+KD+YKT VF Sbjct: 418 EENLQSRLRGTLLMALSNQEGHLVLAPGNKSELAVGYSTLYGDSVGGYGPIKDVYKTSVF 477 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE 498 +LA WRN G P +P + + K PSAELRP Q D +SLP YP+LD I+ V+ Sbjct: 478 RLAEWRNRAARDRGRTP---PVPENSITKPPSAELRPGQVDTDSLPDYPVLDAILALYVD 534 Query: 499 NEES-----FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + D+E T+R V+ +EYKRRQ P GTKI+ K FG+DR P++N Sbjct: 535 RDRGADEIVAAGYDRELVTRTLRMVDT----AEYKRRQYPPGTKISPKGFGKDRRLPVTN 590 Query: 554 KFRD 557 ++R+ Sbjct: 591 RWRE 594 >gi|154488718|ref|ZP_02029567.1| hypothetical protein BIFADO_02025 [Bifidobacterium adolescentis L2-32] gi|154082855|gb|EDN81900.1| hypothetical protein BIFADO_02025 [Bifidobacterium adolescentis L2-32] Length = 565 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 222/579 (38%), Positives = 325/579 (56%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K R A +QG +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDSNADKVMRYAHLAAQQGAQVVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G +VVG D+E N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELASDSLGELYVVVGTVGTDRETSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L K+ + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVNGARIGVAICEDIWQDGGPVAELAKENIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRLDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFVVDTDGSLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E ++ + D T+ +E Y ACVL L+DY+ KN+F V Sbjct: 241 MED--LSFFDLDTSAEH------QKVGTIAAKPDPDEEVYTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G ENV I +P Y+S S +DAA A+ +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGENVYGISMPSMYSSDGSKDDAADLARNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F S +Q E G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PL---FVSFQNQL---ELEGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNS-----------HGITSGLG----PLTE--V 459 T+YGD GG+ P+KDL KT+V++++ WRN H + + G PL + + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNEQGSAGTPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + DE TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAMYIEHAHGRADLLADGFDEATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|312195611|ref|YP_004015672.1| NAD+ synthetase [Frankia sp. EuI1c] gi|311226947|gb|ADP79802.1| NAD+ synthetase [Frankia sp. EuI1c] Length = 597 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 222/615 (36%), Positives = 321/615 (52%), Gaps = 73/615 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ++ VGD+ GN + A +G L+ F EL ++GYPPEDLV ++S Sbjct: 1 MPQLRIALAQVDTTVGDLDGNADLVSAWTKRALAEGAHLVAFGELTLTGYPPEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-------------PRQDQEGVLNSVVILDA 105 ++ A +A+ L D GAG +VVG+ P + + N+ +L Sbjct: 61 YVAASRAALHRLARRLEDEGAGEIAVVVGYLDASPTPAPAVGRPAGEPQ---NTAAVLWR 117 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHL 163 G ++A K +LPNY F E R F+ G ND V R + + + ICED+W+ Sbjct: 118 GEVVARYAKHHLPNYGVFDEFRYFVPG--NDFPVLRLHGVDVALTICEDLWQAGGPVAVA 175 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 + G L +N SPY K R E+ + PI YVN VGGQDELIFDG S Sbjct: 176 RAAGVGLLLCINGSPYEQGKSHHRDELCARRAVEAGAPIAYVNLVGGQDELIFDGDSLVA 235 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS----------ASTMYIPLQEEE 273 D Q+ + + F+E + D L D ++M + +E Sbjct: 236 DAAGQVIARAEVFTETLMVV----DLDLPSGAEAGPDGLVTGPVDALDGTSMTVTRRELT 291 Query: 274 AD----------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 + Y A V RDYV+KN F V++GLSGGIDSAL A I Sbjct: 292 TEPLPAFPARPPALAARPDPAAELYEALVTGTRDYVRKNGFRSVVLGLSGGIDSALVATI 351 Query: 312 AVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 AVDALG E V T+ +P ++S S++DAA A G +++V+ I V+ F + Sbjct: 352 AVDALGAEAVHTVAMPSVHSSAGSVQDAADLAHRQGTRHEVIAIQPTVDAFHGALEGTGG 411 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 G+ AEN+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GG+ P+KD Sbjct: 412 LH--GLAAENLQARVRGTLLMALSNEHGHLVLTTGNKSELATGFSTLYGDSAGGYAPIKD 469 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPY----P 487 + KT V+ L+ WRN+ G P IP I+ K PSAEL P Q D + LP Y P Sbjct: 470 VSKTNVWALSRWRNAEAERRGATP---PIPEIIITKPPSAELAPGQLDSDRLPDYGILDP 526 Query: 488 ILDDIIKRIVENEESF-INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRD 546 +LDD + + + E +D D +R V+ +EYKRRQ P G K+T+K+FGRD Sbjct: 527 VLDDYVSQDMGRAELVAAGHDPAVVDRVIRLVDL----AEYKRRQNPPGPKVTSKAFGRD 582 Query: 547 RLYPISNKFRDHISE 561 R PI++++R+ ++ Sbjct: 583 RRLPITSRWREKPTQ 597 >gi|330469435|ref|YP_004407178.1| NAD+ synthetase [Verrucosispora maris AB-18-032] gi|328812406|gb|AEB46578.1| NAD+ synthetase [Verrucosispora maris AB-18-032] Length = 588 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 227/599 (37%), Positives = 323/599 (53%), Gaps = 56/599 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q+NP VGD+ GN R A G L+LF E+ ++GYP EDLVF++S Sbjct: 1 MPTLRLALCQVNPSVGDLTGNADIVRAWSRRAADAGAQLVLFPEMVLTGYPVEDLVFRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-----PRQ---DQE---GVLNSVVILDAGN 107 F+ A +A+D L +D G G IVVG+ P Q D E G N+ +L G Sbjct: 61 FVAASKAALDRLATDLAADGLGAVPIVVGYLDADGPPQVSGDAEPGRGARNAAALLHRGE 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 + K +LPNY F E R F+ G + + + + + ICED+W+ ++ Sbjct: 121 VRITYFKHHLPNYGVFDEDRYFVPGDTLTVVRLGGVDVALTICEDLWQAGGPFAAARQAD 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + S+N SPY NK R +V + + I YVN VGGQDEL+F+G S Sbjct: 181 VGLVVSINGSPYELNKDDLRLPVVRRRAAESQATIAYVNMVGGQDELVFEGDSMIVAPDG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD------------------------SAS 263 L + F E + + + D + Sbjct: 241 TLLARAPQFVEHLLVHDVQVPPAVDASEVADGDRVGDGLRLVRRTVEGLPPTPDGPAALG 300 Query: 264 TMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 + P+ +E + A VL LRDYV KN F V++GLSGGIDSA+ AAIAVDALG + V Sbjct: 301 GVIEPVADEAEVWQALVLGLRDYVNKNRFPSVVLGLSGGIDSAVVAAIAVDALGPDRVVG 360 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 + LP +++S S EDAA AK G Y + PI +V+ F + +S SG+ EN+Q Sbjct: 361 VSLPSQHSSEHSREDAADLAKRTGLDYRIEPIQPMVDTFLANLSL------SGVAVENLQ 414 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R+RG ILMALSN ++LTT NKSE++VGY TLYGD GGFNP+KD++KT V++LA W Sbjct: 415 ARVRGVILMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGFNPIKDVWKTLVWRLAKW 474 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE--- 500 RN+ G P IP + + K PSAEL P Q D ++LP Y +LD I+ V+ + Sbjct: 475 RNAEAARLGGTP---PIPENSIGKPPSAELSPGQLDSDTLPDYDVLDPILIGYVDGDLGR 531 Query: 501 ESFI--NNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + + +D D+ +R V+ +EYKRRQ+ GTKI+ K+FGRDR PI+N++R+ Sbjct: 532 DGLVASGHDAAVVDKVLRMVDT----AEYKRRQSAPGTKISMKAFGRDRRLPITNRWRE 586 >gi|295839307|ref|ZP_06826240.1| glutamine-dependent NAD+ synthetase [Streptomyces sp. SPB74] gi|197696920|gb|EDY43853.1| glutamine-dependent NAD+ synthetase [Streptomyces sp. SPB74] Length = 586 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 210/592 (35%), Positives = 311/592 (52%), Gaps = 44/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VVGD+AGN A +G L+ F E+ ++GYP EDL + + Sbjct: 1 MPQLRLAMNQIDAVVGDLAGNADAVLHWTRHAAERGAHLVAFPEMVLTGYPVEDLALRST 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-----PRQDQEGV-----LNSVVILDAGNI 108 F++A +A+ L + + G G +V+G+ Q + G+ N+ +L G + Sbjct: 61 FVEASRAALHALATRLVEAGLGGLPVVLGYLDRSETDQHRYGMPAGSPRNAAAVLHGGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 ALRFAKHHLPNYGVFDEFRYFVPGDTLPVVRVHGVDVALAICEDLWQDGGRVPATRAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R E+V + Y+ GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLELVRKRAREAGCTTAYLAMSGGQDELVFDGDSIVVDKDGS 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQ------------LSQWNYMSDDSASTMYIP-------- 268 + + F+E F+ + L + + Y P Sbjct: 241 VITRAPQFTEGCFLLDLDLPPAPPEEPAGTVHDGLRIEHVTLSPTPLPAYEPEYTGQYAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L++ E Y A V LR YV+KN F V+IGLSGGIDSALCAAIA DA+G E+V + +P Sbjct: 301 RLEDAEEVYGALVTGLRAYVRKNGFRTVLIGLSGGIDSALCAAIACDAIGAEHVHGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A G Y +PI + + + + +G+ EN+Q+R+R Sbjct: 361 SKYSSEHSKDDAADLAARTGLHYRTVPIAPMFDAYMDALGF------TGLAEENLQARLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LM +SN ++L NKSE++VGY TLYGD G + P+KD+YK+QVF LA WRN Sbjct: 415 GTTLMGISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSQVFALARWRNQA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF-INN 506 G P IP + + K PSAELRP Q D +SLP Y +LD ++ V+ ++ Sbjct: 475 AEQRGETP---PIPENTIAKPPSAELRPGQVDTDSLPDYDVLDRVLAMYVDQDQGADAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 ++ E V V ++ G+EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDPEVVARVLRMVDGAEYKRRQYPPGTKISPKGFGKDRRMPITNRWRER 583 >gi|322435346|ref|YP_004217558.1| NAD+ synthetase [Acidobacterium sp. MP5ACTX9] gi|321163073|gb|ADW68778.1| NAD+ synthetase [Acidobacterium sp. MP5ACTX9] Length = 570 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 226/586 (38%), Positives = 317/586 (54%), Gaps = 52/586 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP VGD GN K A G+DL++F EL + GYPP DL+ K++F+ Sbjct: 2 VKIALAQINPTVGDFVGNTRKILEFAGRAADAGVDLVVFPELAVCGYPPADLLEKRAFVD 61 Query: 65 ACSSAIDTLKSDTHDGG-AGIVVG--FPRQDQEG--VLNSVVILDAGNIIAVRDKINLPN 119 AI ++ T G ++ G P EG V N V++ AG + AV+ K LP Sbjct: 62 RAGEAIGEIQQWTGIAGRPAVLCGSVMPSGVSEGKQVRNVAVLMQAGKVRAVQQKTLLPF 121 Query: 120 YSEFHEKRTF----ISGYSNDPIVFRDIRLGILICEDIWKNSNIC--------------- 160 Y F E+R F ++ ++ L + ICED W + Sbjct: 122 YDVFDEQRYFEPATQQALTSIMTAKGEVPLAVTICEDAWNDKGFWPRRLYAIDPIERLME 181 Query: 161 ------KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL 214 + L+ Q A+ + +++ASP++ K + R E++ + VNQVGG D L Sbjct: 182 TWDSQPESLRGQ-AKVIVNISASPFWKGKQQVRQEMLAALAVRHGAVVAMVNQVGGNDSL 240 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQ--NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE 272 IFDGAS L F E F T ++ SQ + PL + Sbjct: 241 IFDGASVVMGADGTLIGMGAAFVEDLVIFETGAVVEEPTSQKRDVGH--------PLDDI 292 Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 +A ++A VL RDYV+K F K +IGLSGGIDSAL AAIAV+ALG ENV + +P +Y+S Sbjct: 293 KAMWDALVLGTRDYVRKCGFSKAVIGLSGGIDSALVAAIAVEALGAENVMGVGMPSEYSS 352 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 S +DA A+ LG ++++L IH+ + ++ P G+ EN+Q+RIRG +LM Sbjct: 353 EGSKDDARVLAENLGVRFEMLAIHEGYEAYMKMLGPLFAGTPFGLAEENLQARIRGTLLM 412 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ALSN A++LTT NKSE+SVGY TLYGDM GG + D+ KT+V++L+ + N Sbjct: 413 ALSNKFGALVLTTGNKSEMSVGYCTLYGDMVGGLAVIADVVKTKVYELSRYANRE----- 467 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEY 510 EVIP + LEK PSAELRP Q D +SLPPY +LD I++ VE S I +Q+ Sbjct: 468 ----REVIPVATLEKPPSAELRPGQKDTDSLPPYEVLDPILEAYVERYCSAEQIAGEQKV 523 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + E VR V L+ SEYKR+QA K+T KSFG R +PI+ K + Sbjct: 524 DVELVRQVLKLVERSEYKRQQAAPVLKVTRKSFGMGRRFPIAAKVQ 569 >gi|21220709|ref|NP_626488.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces coelicolor A3(2)] gi|13751883|emb|CAC37264.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces coelicolor A3(2)] Length = 613 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 217/604 (35%), Positives = 314/604 (51%), Gaps = 65/604 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGDI GN + +G L+ F E+ ++GYP EDL + S Sbjct: 25 VPRLRLALNQIDSTVGDIDGNAESVLHWTRHSAERGAHLVAFPEMTLTGYPVEDLALRSS 84 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F++A +A+ +L + D G G ++VG PR Q N+ +L G + Sbjct: 85 FVEASRAALRSLAARLADEGLGTVPVIVGHLDRSATAQPRYGQPAGAPQNAAAVLYGGEV 144 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + R + + + ICED+W++ + A Sbjct: 145 ALSFAKHHLPNYGVFDEFRYFVPGDTLPVVRVRGVDVALAICEDLWQDGGRVPAARSARA 204 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ GGQDEL+FDG S D Sbjct: 205 GLLLSVNASPYERDKDDTRLELVRRRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGT 264 Query: 229 LAFQMKHFSEQNFM-----------------------------TEWHYDQQLSQWN-YMS 258 + + F+E + E +Q L ++S Sbjct: 265 VLARAPQFTEGCMVLDLDLPAADADPPTGVVDDGLRIDRVVLPGEAGREQPLPAGEPWLS 324 Query: 259 DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK 318 A PL ++E Y+A V LR YV KN F V+IGLSGGIDSAL A+IA DALG Sbjct: 325 GGHAE----PLDDDEEVYSALVTGLRAYVAKNGFRSVLIGLSGGIDSALVASIACDALGA 380 Query: 319 ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV 378 E+V + +P KY+S S +DAA A+ G Y + I + + + + E +G+ Sbjct: 381 EHVYGVSMPSKYSSGHSRDDAAELARRTGLHYRTVSIEPMFDAYTGAL------ELTGLA 434 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 EN+QSR+RG +LMALSN ++L NKSE++VGY TLYGD GG+ P+KD+YKT VF Sbjct: 435 EENLQSRLRGTLLMALSNQEGHLVLAPGNKSELAVGYSTLYGDSVGGYGPIKDVYKTSVF 494 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE 498 +LA WRN G P +P + + K PSAELRP Q D +SLP YP+LD I+ V+ Sbjct: 495 RLAEWRNRAARDRGRTP---PVPENSITKPPSAELRPGQVDTDSLPDYPVLDAILALYVD 551 Query: 499 NEES-----FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + D+E T+R V+ +EYKRRQ P GTKI+ K FG+DR P++N Sbjct: 552 RDRGADEIVAAGYDRELVTRTLRMVDT----AEYKRRQYPPGTKISPKGFGKDRRLPVTN 607 Query: 554 KFRD 557 ++R+ Sbjct: 608 RWRE 611 >gi|297559901|ref|YP_003678875.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844349|gb|ADH66369.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 590 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 221/600 (36%), Positives = 315/600 (52%), Gaps = 58/600 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIA----KARRAREEANRQGMDLILFTELFISGYPPEDLV 57 + +L+IA+AQ+NP GD+ GN++ ARRA EE G L++ E+ ++GYP EDL Sbjct: 1 MAQLRIALAQVNPTTGDLDGNLSLVVDSARRAAEE----GAHLVVLPEMVVTGYPVEDLA 56 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAG---IVVGF-PRQDQEGVL---------NSVVILD 104 + SF+ A A L +D G G +VVG+ R++ G NSV +L Sbjct: 57 LRNSFVSASIKATRALAADLAREGLGELPVVVGYLSRREGPGARYGQPAGAPQNSVAVLH 116 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G ++ K +LPNY F E R F+ G + + R + + + +CED+W+ + Sbjct: 117 RGGVVLSSAKHHLPNYGVFDEFRNFVPGDTLSVVRVRGVDVALAVCEDLWQEGGPVTAAR 176 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 G L SLN SPY +K R E+ + V + YVN VGGQDEL+F+G S D Sbjct: 177 AAGVGLLVSLNGSPYERHKDDVRLELCQRRAREVGAALAYVNMVGGQDELVFEGDSLIVD 236 Query: 225 GQQQLAFQMKHFSEQNFMTEW--------------HYDQQLSQWNYMSDDS-------AS 263 + +L + F+E + + D + +S D A+ Sbjct: 237 SEGELVARAPQFAETLLVADLDLPEAGPAPDGPGARVDGLRVMRHTVSADPVAPYPPRAA 296 Query: 264 TMYI---PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN 320 T+ PL + Y A V LRDY KN F V++G+SGGIDSAL A IAVDALG + Sbjct: 297 TVTPRPDPLSDTGEVYRALVTGLRDYTVKNGFGSVLVGVSGGIDSALVATIAVDALGADR 356 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 V +++P ++S S+ DA A+ G + I V F + +G+ AE Sbjct: 357 VHGVLMPSAHSSDHSVGDAEELARRQGFATRTIAIAPAVEAFTRSTGEA-GVPLTGLAAE 415 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N+Q+R+RG +LMALSN ++L T NKSE + GY TLYGD GGF P+KD +KT V++L Sbjct: 416 NLQARVRGTLLMALSNEEGHLVLATGNKSEAATGYSTLYGDSVGGFAPIKDCWKTLVWEL 475 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV--- 497 A WRN + G P IP + + K PSAELRP Q D +SLP Y LD ++ V Sbjct: 476 ARWRNEEAVRLGQTP---PIPENSISKPPSAELRPDQLDTDSLPDYTQLDAVLDAYVGTD 532 Query: 498 --ENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 E E F Y+ E VR V ++ +EYKRRQ+ GTKI+A++ RDR PI+N++ Sbjct: 533 KGEAELVFAG----YDPELVRRVIRMVDRAEYKRRQSAPGTKISARNLSRDRRVPITNRW 588 >gi|294629011|ref|ZP_06707571.1| glutamine-dependent NAD(+) synthetase [Streptomyces sp. e14] gi|292832344|gb|EFF90693.1| glutamine-dependent NAD(+) synthetase [Streptomyces sp. e14] Length = 591 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 215/597 (36%), Positives = 310/597 (51%), Gaps = 52/597 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+A N R + QG L+ F E+ ++GYP EDL + S Sbjct: 8 VPQLRLALNQIDSRVGDLAANAESILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSS 67 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-----PRQDQEGV-----LNSVVILDAGNI 108 F+ A +A+ L + G G +VVG+ Q + G+ N+ +L G + Sbjct: 68 FVTASRTALRELAARLAGEGLGELPVVVGYLDRSESAQPKYGMPAGAPRNAAAVLHRGEV 127 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + A Sbjct: 128 VLTFAKHHLPNYGVFDEFRYFVPGDTMPVLRVHGVDVALAICEDLWQDGGRVPAARTARA 187 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R E+V + Y+ GGQDEL+FDG S + Sbjct: 188 GLLLSVNASPYEREKDDTRLELVRKRAQEAGCTTAYLAMTGGQDELVFDGDSIVVGADGE 247 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIP-------- 268 + + F E + + D L + + Y P Sbjct: 248 VIARAAQFEETCVVLDLELPAAAADAPSGVVDDGLRVDRVVLSEEPLPAYEPVPAAGCGE 307 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y A V LR YV KN F V+IGLSGGIDSAL AAIA DA+G ENV + +P Sbjct: 308 RLDDDEEVYTALVTGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDAVGPENVYGVSMP 367 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G + +PI + + + + +G+ EN+QSR+R Sbjct: 368 SKYSSEHSKDDAAELARRTGLNFRTVPIVPMFDAYMDSLGL------TGLAEENLQSRLR 421 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMALSN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 422 GTLLMALSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAKWRNRA 481 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES----- 502 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ ++ Sbjct: 482 AAERGQTP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDKGADEIV 538 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 D E T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N +R+H+ Sbjct: 539 AAGYDPELVARTLRMVDT----AEYKRRQYPPGTKISPKGFGKDRRLPITNGWREHL 591 >gi|224283338|ref|ZP_03646660.1| Putative amidohydrolase [Bifidobacterium bifidum NCIMB 41171] gi|313140489|ref|ZP_07802682.1| glutamine-dependent NAD synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313132999|gb|EFR50616.1| glutamine-dependent NAD synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 565 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 218/579 (37%), Positives = 321/579 (55%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+AQ++ VGD+ GN K A +G +++F E+ ++GYP EDL +++ Sbjct: 1 MTHLRFALAQIDTCVGDLDGNADKIMHYAHLAAHEGAHVVIFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G G + VG D + N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELEADGLGDLYVAVGTVGTDHASDKPRNRMVVLHDGMVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + +R+G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFAAGDRTVVLDIDGVRIGVAICEDIWQDGGPVARLADEHIDVLMTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R+++ + + V P+IYVNQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTHTRYDLAVRRAAEVGAPMIYVNQVGGQDDLVFDGGSFVVDRDGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + D + ++D +P +EE Y ACVL L+DY+ KN F V Sbjct: 241 MEHLGLFDLDTDAEHQTTGDIAD-------LPDPDEEV-YTACVLGLKDYMAKNRFSGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G NV I +P Y+S S +DAA A +G YDV PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGHNVHGISMPSMYSSIGSKDDAADLAANIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + N + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PMFNVYQG------QLKLEGVAAENLQARIRGVIVMAYSNSLGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----------------NSHGITSGLGPLTEV 459 T+YGD GG+ P+KDL KT+V++L+ WR N +G P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWELSRWRNRAAAAGVGIGGLRIVGNENGDAGTPLPGGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + ++++TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYELLDKVLAAYIEHAHGRADLLADGFDEKTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|311064605|ref|YP_003971330.1| glutamine-dependent NAD(+) synthetase NadE [Bifidobacterium bifidum PRL2010] gi|310866924|gb|ADP36293.1| NadE Glutamine-dependent NAD(+) synthetase [Bifidobacterium bifidum PRL2010] Length = 565 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 218/579 (37%), Positives = 322/579 (55%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+AQ++ VGD+ GN K A +G +++F E+ ++GYP EDL +++ Sbjct: 1 MTHLRFALAQIDTCVGDLDGNADKIMHYAHLAAHEGARVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G G + VG D + N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELEADGLGDLYVAVGTVGTDHASDKPRNRMVVLHDGMVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + +R+G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFAAGDRTVVLDIDGVRIGVAICEDIWQDGGPVARLADEHIDVLMTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R+++ + + V P+IYVNQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTHTRYDLAVRRAAEVGAPMIYVNQVGGQDDLVFDGGSFVVDRDGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + D + + ++D +P +EE Y ACVL L+DY+ KN F V Sbjct: 241 MEHLGLFDLDTDAEHQTTSDIAD-------LPDPDEEV-YTACVLGLKDYMAKNRFSGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G NV I +P Y+S S +DAA A +G YDV PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGRNVHGISMPSMYSSIGSKDDAADLAANIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + N + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PIFNVYQG------QLKLEGVAAENLQARIRGVIVMAYSNSLGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----------------NSHGITSGLGPLTEV 459 T+YGD GG+ P+KDL KT+V++L+ WR N +G P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWELSRWRNRAAAAGVGIGGLRIVGNENGDAGTPLPGGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + ++++TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYELLDKVLAAYIEHAHGRADLLADGFDEKTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|83589417|ref|YP_429426.1| NH(3)-dependent NAD(+) synthetase [Moorella thermoacetica ATCC 39073] gi|83572331|gb|ABC18883.1| NH(3)-dependent NAD(+) synthetase [Moorella thermoacetica ATCC 39073] Length = 577 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 218/589 (37%), Positives = 315/589 (53%), Gaps = 57/589 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQL+P +GDI G++AK R+A EA + G L++F EL ++GYPP DL+ + F++ Sbjct: 1 MRIAMAQLDPTIGDIGGSLAKIRQAVAEARQHGAGLVIFPELAVTGYPPRDLLCRHDFLE 60 Query: 65 ----ACSSAIDTLKSDTHDGGAGIVVGFP---RQDQEGVLNSVVILDAGNIIAVRDKINL 117 A + I L +T I++G P R + + N+ ++ G + +DK L Sbjct: 61 RVERALAEDIAPLSRET-----AIIIGAPVRGRGNPAFLYNAALLYSGGELCGRQDKSLL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI----------CKHLKKQG 167 PNY F E R F P+ +RLG+ ICEDIW + + + QG Sbjct: 116 PNYDVFDESRYFKPATRRLPVFLEGLRLGLTICEDIWNDKDYWNRQLYDIDPVAEMLAQG 175 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 AE L +++ASPY++ K+ R +++ PI+Y+NQVGG DELIFDG S D Sbjct: 176 AEILINISASPYHYGKIALRADMLRSLARKYGRPILYINQVGGNDELIFDGTSLAIDANG 235 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP--------------LQEEE 273 + F+E + + Q + A IP L EE Sbjct: 236 NVVSLAASFAEDLVLLDLERPQAGAALTLKPVKRARPGAIPAGVAPEAGRNETEFLTGEE 295 Query: 274 AD--------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 Y A VL + DY+ K F K ++GLSGGIDS++ AA+A A+G ENV + Sbjct: 296 IVISEDISYVYRALVLGIADYLHKTGFRKALVGLSGGIDSSVTAALAAAAMGPENVLGVA 355 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQS 384 +P +Y+SP S DA A LG + +PI + + M+ P G +A EN+Q+ Sbjct: 356 MPSRYSSPGSRSDARKLAANLGIAFREIPIEGMFKAYLEAMNG--GGPPRGDLAEENVQA 413 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 RIRGNILM +SN + LTT NKSE++VGY TLYGDMSGG L D+ K V+ LA + Sbjct: 414 RIRGNILMFISNREGYLTLTTGNKSEMAVGYCTLYGDMSGGLAVLADVPKVMVYDLARYI 473 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFI 504 N E+IP +L K PSAELRP Q DQ+SLPPY +LD I++ +E E+S Sbjct: 474 NRD---------REIIPADVLVKPPSAELRPGQVDQDSLPPYEVLDAILQAYIEEEKSAE 524 Query: 505 N-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 + ++ + VR + + +EYKRRQA G ++T+K+FG R PI+ Sbjct: 525 EIAGRGFDLDLVREIIRKVDRAEYKRRQAAPGLRVTSKAFGMGRRMPIA 573 >gi|310287707|ref|YP_003938965.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium bifidum S17] gi|309251643|gb|ADO53391.1| Glutamine-dependent NAD(+) synthetase [Bifidobacterium bifidum S17] Length = 565 Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 218/579 (37%), Positives = 321/579 (55%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+AQ++ VGD+ GN K A +G +++F E+ ++GYP EDL +++ Sbjct: 1 MTHLRFALAQIDTCVGDLDGNADKIMHYAHLAAHEGAHVVIFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G G + VG D + N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELEADGLGDLYVAVGTVGTDHASDKPRNRMVVLHDGMVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + +R+G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFAAGDRTVVLDIDGVRIGVAICEDIWQDGGPVARLVDEHIDVLMTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R+++ + + V P+IYVNQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTHTRYDLAVRRAAEVGAPMIYVNQVGGQDDLVFDGGSFVVDRDGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + D + ++D +P +EE Y ACVL L+DY+ KN F V Sbjct: 241 MEHLGLFDLDTDAEHQTTGDIAD-------LPDPDEEV-YTACVLGLKDYMAKNRFSGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G NV I +P Y+S S +DAA A +G YDV PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGHNVHGISMPSMYSSIGSKDDAADLAANIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + N + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PMFNVYQG------QLKLEGVAAENLQARIRGVIVMAYSNSLGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----------------NSHGITSGLGPLTEV 459 T+YGD GG+ P+KDL KT+V++L+ WR N +G P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWELSRWRNRAAAAGVGIGGLRIVGNENGDAGTPLPGGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + ++++TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYELLDKVLAAYIEHAHGRADLLADGFDEKTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|258514323|ref|YP_003190545.1| NAD+ synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257778028|gb|ACV61922.1| NAD+ synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 558 Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 223/581 (38%), Positives = 330/581 (56%), Gaps = 55/581 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP +GD+ GN AK ++ +A + G+DL++ EL ++GYPP+DL+++K F++ Sbjct: 1 MKIALAQINPTIGDLTGNSAKIKQYLNKALQAGVDLMICPELAVTGYPPKDLLYRKEFLR 60 Query: 65 ACSSAI--DTLKSDTHDGGAGIVVGFPRQD--QEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + D L G G+++G P + ++ + NS ++++ G II++ DK LPNY Sbjct: 61 EVNQVVERDILPCT---GDIGLILGVPVEGDGEDDLYNSAIVMENGKIISLHDKTLLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI----------CKHLKKQGAEF 170 F EKR F G P+ FRD+ LG+ ICEDIW + + + L +G E Sbjct: 118 DVFDEKRYFKPGLIRMPLHFRDLVLGVTICEDIWNDKDYWPRQKYAVDPVQELADRGIEI 177 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + ++ ASPY++ K R +I+ L IIYVNQVGG DELIFDG S + Q+ Sbjct: 178 IINIAASPYHYGKQNLRMQIMQQLAKKYRLHIIYVNQVGGNDELIFDGCSMVVNKHGQVV 237 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----LQEEEAD-------YNAC 279 + K F+E + E + +S S + P Q EA ++A Sbjct: 238 RKAKSFAEDFLVFEID--------DLREKESVSEKFFPAAGQTQLHEAGEENIASVHDAL 289 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ K F+K +IGLSGGIDSA+ AA+AV ALGKENV + +P +Y+S S DA Sbjct: 290 VLGIRDYIGKIGFNKALIGLSGGIDSAVTAALAVAALGKENVLGVAMPSRYSSAGSKSDA 349 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A LG + ++P+ + + F ++ +Q + ENIQ+RIRG+ILM LSN Sbjct: 350 EKLAANLGIDFRIIPVESIFDVFLTVFNQG-ANPLMDLAEENIQARIRGSILMFLSNRED 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +LTT NKSE +VGY TLYGDM G + D+ K V++LA + N EV Sbjct: 409 YFVLTTGNKSETAVGYCTLYGDMCGSLAVIGDVPKVMVYELARYINRQ---------NEV 459 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-----YNDET 514 IP + + K+PSAELRP Q DQ+SLPPY ILD+II+ VE +S +E Y Sbjct: 460 IPETTIIKAPSAELRPDQLDQDSLPPYDILDEIIRLYVEEGKS----SEEIAVLGYEPLL 515 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + + + +EYKR+QA ++T+K+FG R PI ++ Sbjct: 516 INNIIRKINAAEYKRQQAAPTLRVTSKAFGSGRRMPIVQRW 556 >gi|320107734|ref|YP_004183324.1| NAD+ synthetase [Terriglobus saanensis SP1PR4] gi|319926255|gb|ADV83330.1| NAD+ synthetase [Terriglobus saanensis SP1PR4] Length = 553 Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 223/576 (38%), Positives = 313/576 (54%), Gaps = 48/576 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP VGD AGN++ A+R G +L++F EL + GYPP DL+ KK+F++ Sbjct: 1 MKIALAQINPTVGDFAGNVSVILDFALRASRLGAELVIFPELAVCGYPPADLIEKKTFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-------FPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A A+ + + T G I+ G P + N + G + ++ K+ L Sbjct: 61 AAQEALAQVAASTEKNGLAILCGSVLHSGAVPGKTAR---NVAALCQRGKVSFIQQKMLL 117 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQG 167 P Y F E+R F S I + + I ICED W + S+ + L Sbjct: 118 PFYDVFDEQRYFEPAVSQSLIEINGVNVAISICEDAWNDKGFWPNRLYASDPIERLMSSA 177 Query: 168 AE-----FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 E L +++ASP++ KL R +++ + VNQVGG D L+FDG+SF Sbjct: 178 EEGNAPRLLLNISASPFWRGKLTTRRKMLAALAQRYGAVVAMVNQVGGNDSLVFDGSSFA 237 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 +L Q K F E + + +++ +DD+A ++A VL Sbjct: 238 VAPDGRLLAQAKSFEEDLILFDTSSAERVDS-TAEADDTAQL-----------WDALVLG 285 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 RDYV+K F K I+GLSGGIDSA+ AAIAVDALG ENV+ I +P +Y+S S+EDA A Sbjct: 286 TRDYVRKCGFKKAIVGLSGGIDSAVVAAIAVDALGAENVKGIGMPSEYSSSGSVEDARAL 345 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG +D+ I + + F ++ Q P G+ EN+Q RIRG +LMALSN + A++ Sbjct: 346 AENLGIAFDLFAIRSIYDSFTLALAPSFQGTPFGLAEENLQPRIRGTLLMALSNKTGALV 405 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 LTT NKSE++VGY TLYGDM G + D+ K +V+ LA + N VIP Sbjct: 406 LTTGNKSEMAVGYCTLYGDMVGALAVIGDVVKMRVYDLARYANRK---------RAVIPA 456 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEH 520 L K PSAELRP Q D +SLPPY +LD I++ VE ES I Q N E VR+V Sbjct: 457 DTLTKPPSAELRPDQKDTDSLPPYEVLDPIVEAYVERYESVGQIAETQGVNAELVRHVVQ 516 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ SEYKR+QA K+T KSFG R +PI+ K + Sbjct: 517 LIERSEYKRQQAAPVLKVTQKSFGPGRRFPIAAKVQ 552 >gi|258404559|ref|YP_003197301.1| NAD+ synthetase [Desulfohalobium retbaense DSM 5692] gi|257796786|gb|ACV67723.1| NAD+ synthetase [Desulfohalobium retbaense DSM 5692] Length = 548 Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 217/569 (38%), Positives = 307/569 (53%), Gaps = 39/569 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q NP++GDI GN+ RA E A QG L L EL ++GYPP DL+ ++ +Q Sbjct: 1 MRLALVQNNPIIGDIHGNMQALVRAGERAFAQGARLALAPELALTGYPPRDLLLNEAVLQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQD------QEGVLNSVVILDAGNIIAVRDKINL 117 + A++ L + G A V+G P R D + GV N V+L+ G + V K L Sbjct: 61 SAWRAVEELAARLPTGLA-FVLGTPLRTDNAPELPEGGVYNGAVLLEGGAVRQVFAKTLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICK----------HLKKQG 167 P Y F E R F G R G+ ICED W + + K L QG Sbjct: 120 PTYDVFDETRYFSPGPGPGVFELDGWRFGVTICEDAWNDKDFWKKHRYPADPVEELATQG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + L +L+ASP+ K + R E+ +P+ + NQVGG D+L+F G S D Sbjct: 180 IDGLINLSASPFSLGKHRVREEMFASLAHKYAVPLYFANQVGGNDDLVFPGRSLALDASG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 Q+ + + F E + E Q +DD + + A VL RDYV Sbjct: 240 QVIGRGRGFVEDLVIVE----QTPGSGPLPADD--------FERPAEAWAAVVLGTRDYV 287 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +K+ F K ++GLSGG+DSALCAA+AV+ALG ENV +++P YTS S+EDA A A LG Sbjct: 288 RKSGFSKALLGLSGGVDSALCAAVAVEALGAENVLGVLMPSPYTSAASIEDAQALADTLG 347 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 VLPI ++N F + + ENIQSRIRGN+LMALSN ++LLTT N Sbjct: 348 IAQQVLPIEPVMNAFEETLRPAFTGYTPDVTEENIQSRIRGNLLMALSNKYGSLLLTTGN 407 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY T+YGDM+G + D+ KT V+++ W N EV+P IL+K Sbjct: 408 KSELAVGYCTIYGDMAGALGVIADMPKTLVYEVCRWLNRE--------RGEVVPQRILDK 459 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSE 526 +PSAELRP Q D +SLP Y LD ++ +V+ S + Y+ R V+ L+ +E Sbjct: 460 APSAELRPDQKDSDSLPDYATLDGLLGLLVDRHYSVEQCVEAGYDAGMAREVQRLVRRAE 519 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G KIT ++FG P++ ++ Sbjct: 520 FKRRQAPPGIKITDRAFGTGWRMPLAARW 548 >gi|268317860|ref|YP_003291579.1| NAD+ synthetase [Rhodothermus marinus DSM 4252] gi|262335394|gb|ACY49191.1| NAD+ synthetase [Rhodothermus marinus DSM 4252] Length = 571 Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 222/580 (38%), Positives = 325/580 (56%), Gaps = 48/580 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLNP+VGD+ GN K +A RQG +L++F E+ ++GYPP+DL+ +FI+ Sbjct: 1 MKIALAQLNPIVGDLQGNRRKIVDFAHQAYRQGAELVIFPEMCVAGYPPQDLLDMPAFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV----LNSVVILDAGNIIAVRDKINLPNY 120 A + ++T+ + G+++G P +++ V N+ ++L+ G I+A K LP Y Sbjct: 61 AVAHTVETIALEVPRE-LGVILGAPIRNESPVGKRLFNAALLLEGGRIVARVPKRLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEF 170 F E R F G + +R +R+G+ ICED+W N N L QG + Sbjct: 120 DVFDEYRYFEPGPPQPVVEWRGLRIGLHICEDMWNNEDWAPYHLYDENPIDELAAQGIDL 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 +++ASP+ K +R I+ G +P IYVNQVG ELIFDG S + Sbjct: 180 FVNISASPFSLGKHDERSRIIEGICREHGVPFIYVNQVGANTELIFDGDSRVHAPDGSIL 239 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQK 289 F E L W+ +D + Y+ + E D ++A VL +RDY K Sbjct: 240 LCAPSFQEA-----------LLIWDTEADYAP---YVHRRTEIEDLHDALVLGIRDYFYK 285 Query: 290 NN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 F KV++GLSGGIDSA+ A+AV ALG E V + +P KY+SP+S+EDA A+ LG Sbjct: 286 TGAFEKVVLGLSGGIDSAVVCALAVAALGPERVVGVAMPSKYSSPESVEDARQLAENLGI 345 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + ++PI V+ F ++ + P + ENIQ+R+RG LMALSN + +LL+T NK Sbjct: 346 TFHIIPIMPAVDAFREMLRPVFDDLPEDVTEENIQARVRGVTLMALSNKFRYLLLSTGNK 405 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++VGY TLYGD +GG L D+YKTQV++LA + N+ VIP IL K Sbjct: 406 SEMAVGYVTLYGDTNGGLAVLADVYKTQVYRLARYINARAGRY-------VIPERILTKP 458 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEE------SFINNDQEYNDETVRYVEHLL 522 PSAELRP Q D +SLPPY +LD I++R +E+ E + D+ + +R V+ Sbjct: 459 PSAELRPGQKDTDSLPPYEVLDVILQRYIEHREEVDEIVAATGFDRALVADILRRVDR-- 516 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 +EYKRRQ P G ++T K+FG R PI ++ + EE Sbjct: 517 --NEYKRRQTPPGLRVTGKAFGIGRRLPIVMRWNRAVLEE 554 >gi|255530325|ref|YP_003090697.1| NAD+ synthetase [Pedobacter heparinus DSM 2366] gi|255343309|gb|ACU02635.1| NAD+ synthetase [Pedobacter heparinus DSM 2366] Length = 546 Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 208/568 (36%), Positives = 321/568 (56%), Gaps = 41/568 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +G+ N K E+A QG+DLI+F EL + GYPP D + FI+ Sbjct: 1 MKIALAQLNYHIGNFEYNTHKIIDHIEQAKIQGVDLIVFAELAVCGYPPRDFLEFDEFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKINLPNY 120 C + + H G +VG P ++ + + N+ ++ G + V K LPNY Sbjct: 61 LCEKSAQQIAE--HCKGIACIVGLPVKNDVLAGKDLYNAAYFIEDGRLKRVVKKALLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-------ICKHLKKQGAEFLFS 173 F E R F + I F+ I++ + ICED+W +N L +Q + + + Sbjct: 119 DVFDEYRYFEPASHFECIDFQGIKIAVTICEDLWNINNNPLYIASPMDELIRQKPKLMIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + ++R +++ +LP++YVNQVG Q E+IFDG S FD + L +M Sbjct: 179 IAASPFSYCHDEERVVVLSDNARKYNLPLLYVNQVGAQTEIIFDGGSLAFDAKGNLIDEM 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-----EADYNACVLSLRDYVQ 288 +F E + E+ +D+ Y+P+Q + E + A V+ ++DY Sbjct: 239 PYFKEALRVYEF-------------EDNRIKGYVPMQHQAIPDIEQIHQALVMGIKDYFA 285 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K+ F K ++GLSGGIDSA+ A+A ALG ENV +++P KY+S S++DA K +GC Sbjct: 286 KSGFSKAVLGLSGGIDSAIVCALACRALGPENVMAVLMPSKYSSDHSIQDALDLVKNIGC 345 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +++V+PI + + F ++M+ ++ P + ENIQ+R RG ++MA+SN +LL TSNK Sbjct: 346 EHEVIPIKEAADAFDNMMAPAFKDLPFNLTEENIQARCRGIVVMAMSNKFGYILLNTSNK 405 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE +VGYGTLYGDM G + D+YKTQV+QLA++ N GI VIP + + K Sbjct: 406 SECAVGYGTLYGDMCGAIGVIGDVYKTQVYQLANYINKDGI---------VIPENSIVKP 456 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEY 527 PSAELRP Q D +SLP Y ILD I+ + +E ++S Q Y++ VR + ++ +E+ Sbjct: 457 PSAELRPGQKDSDSLPDYDILDKILFQYIEQKQSSSAIIAQGYDEGLVRRIIKMVNTAEF 516 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KR Q P +++ K+FG R PI K+ Sbjct: 517 KRYQTPPILRVSPKAFGMGRRMPIVGKY 544 >gi|239907746|ref|YP_002954487.1| probable glutamine-dependent NAD(+) synthetase [Desulfovibrio magneticus RS-1] gi|239797612|dbj|BAH76601.1| probable glutamine-dependent NAD(+) synthetase [Desulfovibrio magneticus RS-1] Length = 583 Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 209/583 (35%), Positives = 308/583 (52%), Gaps = 39/583 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ QLNP VGD+A N A A G D+++F E+ ++GYPPEDL+ K Sbjct: 1 MPALRLALCQLNPTVGDVAANAADVVSRLTAARDGGADIVVFPEMVVAGYPPEDLLLKPD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC +A + ++ G + G P + + ++N+ ++ G + + K LPNY Sbjct: 61 FVAACMAAARDIARESQ--GLTAIFGCPWFEGD-LVNAAIVAHDGAVAGIVAKRFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIW-KNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + G+ +CEDIW + + K GA L +++ASPY+ Sbjct: 118 VFDENRYFAAGQGTTVFDRGGLIFGVSVCEDIWYPDGPPTEQAKHGGARLLINISASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ + + + Y N VGGQDEL+FDG S F L + + F E Sbjct: 178 MGKGTSRERMLATRAADNGAFVAYANLVGGQDELVFDGHSLVFAPDGALLARGRQFDEDM 237 Query: 241 FMTEWHYDQQLSQ---------WN------------------YMSDDSASTMYIPLQEEE 273 + D Q W + +TM PL+ Sbjct: 238 VWCDLDVDLPTRQRLLDPRCRKWEPAPACRPVRTALSPLAAPARPALAQATMAAPLEPVA 297 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V + RDYV+K+ F V +GLSGGIDS+L A IA DALG ENV + +P +++S Sbjct: 298 EVYRALVTATRDYVRKSGFCGVALGLSGGIDSSLTAIIAADALGPENVLGVAMPTRFSSD 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 SLEDA A A+ LG + + I + F + + P + EN+Q R+RG +LMA Sbjct: 358 DSLEDAQALAERLGIELKTVVIEPIFQAFLDALGPIFGDRPFDVTEENLQPRVRGTLLMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN ++LTT NKSE+ VGY TLYGD +GG+ +KD+ KT V+ L+ WRN +GL Sbjct: 418 LSNKFGRLVLTTGNKSEVGVGYSTLYGDTAGGYAVIKDVPKTLVYALSRWRNEQ---AGL 474 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYND 512 +VIP +L K P+AELRP+Q D +SLP Y +LD ++ VE S ++ + Sbjct: 475 ----DVIPERVLVKPPTAELRPNQKDSDSLPEYDVLDPTLQAYVELGLSPAAMLERGLDP 530 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V V L+ +EYKRRQ+P G KIT+++FG+D PI N++ Sbjct: 531 AVVDRVTRLVDRNEYKRRQSPPGPKITSRAFGKDWRLPIVNRY 573 >gi|289640878|ref|ZP_06473049.1| NAD+ synthetase [Frankia symbiont of Datisca glomerata] gi|289509454|gb|EFD30382.1| NAD+ synthetase [Frankia symbiont of Datisca glomerata] Length = 616 Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 221/607 (36%), Positives = 315/607 (51%), Gaps = 59/607 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ++ VGD+A N A R G L+ F E+ ++GYP EDLV ++S Sbjct: 1 MTQLRVALAQVDTTVGDLAANADLVSAWAGRAVRAGAHLVAFPEMTLTGYPAEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEG--VLNSVVILDAGNI 108 F QA +A+D L D GAG +VVG+ PR + N+ +L G + Sbjct: 61 FAQASRAAVDRLARRLADEGAGELAVVVGYLDSSRNPTPRLGRPAGEPQNAAAVLWRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 A K +LPNY F E R F+ GY + + +G+ ICED+W++ + Sbjct: 121 AARYAKHHLPNYGVFDEFRYFVPGYDFPVLRLHGVDVGLTICEDLWQDGGPVAVARAAAV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +N SPY K +R E+ + + YVN VGGQDEL+FDG S D + Sbjct: 181 GLLVCINGSPYERGKAFQRDELAAARAREAGAALAYVNLVGGQDELVFDGGSLVVDADGR 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD------------DSASTMYI--------- 267 + + F+E T D L ++ D+ I Sbjct: 241 TLARAEQFTE----TLLTVDLDLPAGALVAGAPVAGPVVTGPVDAGDGTTIAVSRVVLAD 296 Query: 268 ----PLQEEEAD-----------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 P + E Y A V RDYV+KN F V++GLSGGIDSAL A IA Sbjct: 297 EPVSPFEAREPTVAQRLDSAAELYAAVVTGTRDYVRKNGFASVVLGLSGGIDSALVATIA 356 Query: 313 VDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 VDALG V T+ +P ++S S+ DAA A+ G + V+PI +V+ F ++ Sbjct: 357 VDALGAARVHTVAMPSVHSSAGSVADAAELARRTGVTHTVVPIQPVVDAFHDALAG--TG 414 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 +G+ AEN+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GGF P+KD+ Sbjct: 415 GLAGLAAENLQARVRGTLLMALSNAHGHLVLTTGNKSELATGFSTLYGDSAGGFAPIKDV 474 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDI 492 KT V++LA WRN+ G P IP I+ K PSAEL P Q D + LP Y LD + Sbjct: 475 PKTLVWELARWRNAQAPRDGEAP---PIPEEIIVKPPSAELAPGQLDSDRLPDYSTLDAV 531 Query: 493 IKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPI 551 + VE ++ +D +TV V L +EYKRRQ P G K+T+K+FGRDR PI Sbjct: 532 LDDYVERDQGRTELITAGHDPDTVERVIRLADLAEYKRRQNPPGPKVTSKAFGRDRRLPI 591 Query: 552 SNKFRDH 558 ++ +R+ Sbjct: 592 TSHWRER 598 >gi|225352292|ref|ZP_03743315.1| hypothetical protein BIFPSEUDO_03908 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157539|gb|EEG70878.1| hypothetical protein BIFPSEUDO_03908 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 565 Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 224/581 (38%), Positives = 328/581 (56%), Gaps = 41/581 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K R A +QG +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDSNAGKIMRYVRRAAQQGAQVVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F +A + + L ++ G G +VVG D+E N +V+L G + DK Sbjct: 61 FRKAAWNKANWLATELAADGLGDLFVVVGTVGTDRETSKPRNRLVVLHDGVVWDGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L +Q + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVNGARIGVAICEDIWQDGGPVAELAEQHIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P++Y+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRLDLAVRRAAEVNAPMVYLNQVGGQDDLVFDGGSFVVDADGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E ++ + D + + S P +EE Y ACVL L+DY+ KN+F V Sbjct: 241 MED--LSFFDLDTTAER-----QKAGSIAAKPDPDEEV-YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA AK +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGANVYGISMPSMYSSDGSKDDAADLAKNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F S Q E G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PL---FVSFQKQLDLE---GVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSH-------------GITSGLG--PLTE--V 459 T+YGD GG+ P+KDL KT+V++++ WRN G GL PL + + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNEQGLAGTPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVEN---EESFINNDQEYNDETVR 516 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ E + + +++ TV Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYELLDQVLAMYIEHAHGREDLLADG--FDETTVD 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 525 TVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|229817481|ref|ZP_04447763.1| hypothetical protein BIFANG_02744 [Bifidobacterium angulatum DSM 20098] gi|229785270|gb|EEP21384.1| hypothetical protein BIFANG_02744 [Bifidobacterium angulatum DSM 20098] Length = 565 Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 227/583 (38%), Positives = 321/583 (55%), Gaps = 45/583 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ GN K + A ++ F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDGNADKVLQYARIAASNHARVVAFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F A + + L ++ G G +VVG D+E LN +V+L G + A DK Sbjct: 61 FRTAAWNKANWLATELEADGLGDLFVVVGTVGTDREHGKPLNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + + +G+ ICEDIW++ L ++G + L ++N Sbjct: 121 LPNYGVFDEFRIFTPGNKSVVLDIDGVNVGVAICEDIWQDGGPVAELAERGIDVLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ---- 232 SPY K R + + + V P+IYVNQVGGQD+L+FDG SF D L + Sbjct: 181 SPYEEGKTDTRLALAQRRAAEVGAPLIYVNQVGGQDDLVFDGGSFVVDADGTLLERSPMF 240 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 M++ S N T D+QL AST+ L +E Y ACVL L+DY+ KN+F Sbjct: 241 MENLSYINLNTA--ADKQL----------ASTIVDKLDPDEEVYTACVLGLKDYMAKNHF 288 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 V +GLSGGIDSAL AA+A DA G NV I +P Y+S S +DAA A+ LG YD+ Sbjct: 289 TGVTLGLSGGIDSALVAAMAADACGGGNVHGISMPSMYSSDGSKDDAADLAENLGAHYDI 348 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 PI L + Q G+ AEN+Q+RIRG I+MA SN + + T NKSE++ Sbjct: 349 QPIEPLFTAYQH------QLHLDGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELA 402 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-GLGPLTEV------------ 459 GY T+YGD GG+ P+KDL KT+V++L+ WRN G+G L V Sbjct: 403 CGYSTIYGDAVGGYAPIKDLLKTRVWELSRWRNRAAAEGMGIGGLKIVGNEQGGAGVPLK 462 Query: 460 ----IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-T 514 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E + + DE T Sbjct: 463 NGVMIPVNSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEKAHGRADLLADGFDEAT 522 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V V L+ +E+KRRQ P+G K+TA +FGRDR PI++ FR+ Sbjct: 523 VDTVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITSAFRE 565 >gi|297194731|ref|ZP_06912129.1| NH(3)-dependent NAD(+) synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|297152418|gb|EDY66850.2| NH(3)-dependent NAD(+) synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 585 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 211/598 (35%), Positives = 311/598 (52%), Gaps = 52/598 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLAGNAEAIVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEG--VLNSVVILDAGNI 108 F++A + + L + G G ++VG+ PR Q N+ +L G + Sbjct: 61 FVEASRATLRALAARLDSEGFGELPVIVGYLDRSETGRPRYGQPAGSPRNAAAVLHRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + I + + + ICED+W++ + A Sbjct: 121 ALSFAKHHLPNYGVFDEFRYFVPGDTMPVIRVHGVDVALAICEDLWQDGGRVPAARSAKA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R E+V + Y+ +GGQDEL+FDG S + Sbjct: 181 GLLISINASPYEREKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVGADGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQW-NYMSDDSASTMYIPLQEE--------------- 272 + + F+E + + + + + DD + L +E Sbjct: 241 VVARAPQFAEGSVVLDLELPAAAADAPEGVVDDGLRIDRVVLSQEPLPACEAELTGGYAD 300 Query: 273 -----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 E Y+A V+ LR Y KN F V+IGLSGGIDSAL AAIA DALG +NV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + +PI + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTVPIEPMFDAYMGSLGL------TGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTMLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTTVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES----- 502 G P IP + + K PSAELRP Q D +SLP Y +LD +++ V+ ++ Sbjct: 475 AAERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYDVLDRLLELYVDRDQGKDAIV 531 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 D+ +T+R V+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ S Sbjct: 532 AAGFDEALVTKTLRMVDT----AEYKRRQYPPGTKISAKGFGKDRRLPITNRWREATS 585 >gi|302545965|ref|ZP_07298307.1| glutamine-dependent NAD(+) synthetase [Streptomyces hygroscopicus ATCC 53653] gi|302463583|gb|EFL26676.1| glutamine-dependent NAD(+) synthetase [Streptomyces himastatinicus ATCC 53653] Length = 589 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 212/598 (35%), Positives = 312/598 (52%), Gaps = 54/598 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN + QG L+ F E+ ++GYP EDL + S Sbjct: 4 VPQLRLALNQIDSTVGDLAGNAESIVHWTRHSAEQGAHLVAFPEMVLTGYPVEDLALRSS 63 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL---------NSVVILDAGNII 109 F++A +A+ L G G ++VG+ + + N+ +L G I+ Sbjct: 64 FVEASRTALRALAERLDAEGLGELPVIVGYLDRSERARRYGQPAGSPQNAAAVLHRGAIV 123 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G + + I + + ICED+W++ GA Sbjct: 124 LTFAKHHLPNYGVFDEFRYFVPGDTMPVVRVHGIDVALAICEDLWQDGGRVPAAHSAGAG 183 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY K R ++V + Y+ +GGQDEL+FDG S ++ Sbjct: 184 LLLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIIVGRDGEV 243 Query: 230 AFQMKHFSE-------------QNFMTEWHYDQQLSQWNYMSDDSASTMYIP-------- 268 + F+E + + E D L + Y P Sbjct: 244 IARAPQFAEGCVVVDLDLPAADPDAVPEGVVDDGLRIDHRTLSADPLPAYDPEPGLAGGE 303 Query: 269 ---LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 L ++E Y A V+ LR YV KN F V+IGLSGGIDSAL AAIA DA+G +NV + Sbjct: 304 AERLGDDEEIYTALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDAVGAQNVYGVA 363 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P +Y+S S+ DA A+ G + +PI + + + + +G+ EN+QSR Sbjct: 364 MPSRYSSEHSIGDATELARRTGLNFRTVPIAPMFDAYMGSLHL------TGLAEENLQSR 417 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +RG +LMALSN ++L NKSE++ GY TLYGD G + P+KD+YKT +F+LA WRN Sbjct: 418 LRGTMLMALSNQEGHIVLAPGNKSELACGYSTLYGDSVGAYGPIKDVYKTSIFRLAKWRN 477 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 G T IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 478 RAAEERG---QTLPIPENSITKPPSAELRPGQVDTDSLPDYDVLDRILELYVDRDQ---- 530 Query: 506 NDQE-----YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 QE Y+DE V + L+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+H Sbjct: 531 GRQEIVAAGYDDELVTRILRLVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWREH 588 >gi|296453931|ref|YP_003661074.1| NAD+ synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296183362|gb|ADH00244.1| NAD+ synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 565 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 219/581 (37%), Positives = 324/581 (55%), Gaps = 41/581 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELAAQLNDDGLGNLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERGPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKV 295 E +T W +D ++ +P L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDS-------TAEHQVKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGV 291 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V I Sbjct: 292 TLGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQSI 351 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 L N + Q + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 352 EPLFNAYQQ------QLDLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGY 405 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI----------------TSGLGPLTE- 458 T+YGD GG+ P+KDL KT+V++++ WRN +G+ PL + Sbjct: 406 STIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNAGI-PLKDG 464 Query: 459 -VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVR 516 +IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + ++ TV Sbjct: 465 VMIPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQATVD 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 525 TVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|290961002|ref|YP_003492184.1| carbon-nitrogen ligase [Streptomyces scabiei 87.22] gi|260650528|emb|CBG73644.1| putative carbon-nitrogen ligase [Streptomyces scabiei 87.22] Length = 584 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 216/596 (36%), Positives = 317/596 (53%), Gaps = 52/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGDIA N R + QG L+ F E+ ++GYP EDL ++S Sbjct: 1 MPQLRLALNQIDSTVGDIARNAEAVVRWTRHSAEQGAHLVAFPEMVLTGYPVEDLALRQS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F++A SA+ L + D G G +V+G+ P+ Q N+ +L G + Sbjct: 61 FVEASRSALAALAARLADEGFGELPVVLGYLDRSESAAPKYGQPAGAPRNAGAVLYRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 ALTYAKHHLPNYGVFDEFRYFVPGDTMPVVRLHGVDIALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRHGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIP-------- 268 + + FSE + + D L + + Y P Sbjct: 241 VVARAPQFSEGCVVLDLDLPAGAAEPVTGIVDDGLRVDRLVVSEEPLPAYEPELTGGYAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR Y KN F V+IGLSGGIDSAL AA+A DALG +NV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAALACDALGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + + I + + + + E +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTISIAPMFDAYMA------STELTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTLLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAEWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES----- 502 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ ++ Sbjct: 475 AAERGQTP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDQGADAIV 531 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 D+E +T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDRELVVKTLRMVDT----AEYKRRQYPPGTKISPKGFGKDRRLPITNRWREQ 583 >gi|78357134|ref|YP_388583.1| NH(3)-dependent NAD(+) synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219539|gb|ABB38888.1| NH(3)-dependent NAD(+) synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 550 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 212/567 (37%), Positives = 310/567 (54%), Gaps = 35/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ QLNPVVGD+A N + A A+ G L + +EL + GYPP DL+ FI Sbjct: 1 MRIALLQLNPVVGDLAANASAIAGAVRSASAGGARLCVTSELALCGYPPRDLLLMDEFIS 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKINLPNY 120 AC +D L + D ++VG P + V N+ V+L G K+ LP Y Sbjct: 61 ACRGHLDRLAQELADC-CPVLVGAPVAAAGDYPDTVRNAAVLLRDGVAEVAGSKVLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----------NICKHLKKQGAE 169 F E+R F G+ + R+G+ ICEDIW + + L +G + Sbjct: 120 DVFDERRYFTPGHRCGLVTVDGYRVGVSICEDIWNDKEYWGEHRRYPHDPVAELASEGVD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L +L+ASP+ K +R ++ + + +P++YVNQVGG D+LIF G S L Sbjct: 180 LLVNLSASPFSLGKQAQRESMLGAVAARIGVPVVYVNQVGGNDDLIFAGKSMVMGADGTL 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F + + + + ++ D+ + E + A VL RDY K Sbjct: 240 LARAAGFVPEVLLAD----ACAASAGAVAPDAP-------EPEAQIWQALVLGTRDYAAK 288 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F ++GLSGGIDSAL A IA +ALG ENV +M+P Y+S S++D+ A + LG + Sbjct: 289 CGFKGAVLGLSGGIDSALVACIAAEALGPENVLGVMMPSPYSSRGSVDDSVALVQNLGIR 348 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 V+PI L+ F + +S+ + + ENIQSRIRGNILMA+SN +LLTT NKS Sbjct: 349 SRVVPIEPLMRSFDAALSESFAGLDADVTEENIQSRIRGNILMAMSNKFGKVLLTTGNKS 408 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY T+YGDM+GG + DL KT V+ + W NS G EVIP ++LEK+P Sbjct: 409 ELAVGYCTIYGDMAGGLGVIADLPKTMVYAVCRWLNS---VRGF----EVIPRAVLEKAP 461 Query: 470 SAELRPHQTDQESLPPYPILDDIIKR-IVENEESFINNDQEYNDETVRYVEHLLYGSEYK 528 SAELRP Q D +SLP Y +LDD+++R IV + ++ ETVR + L+ +E+K Sbjct: 462 SAELRPDQKDVDSLPDYAVLDDVLERHIVRKQGMAAIVAAGHHPETVRRIIGLVRRAEFK 521 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 RRQAP G K+T ++FG P++ ++ Sbjct: 522 RRQAPPGLKVTDRAFGSGWRMPVAARY 548 >gi|284030550|ref|YP_003380481.1| NAD+ synthetase [Kribbella flavida DSM 17836] gi|283809843|gb|ADB31682.1| NAD+ synthetase [Kribbella flavida DSM 17836] Length = 590 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 222/595 (37%), Positives = 313/595 (52%), Gaps = 52/595 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQLN VGD+ GN K A +G +I F EL ++GYP EDL + S Sbjct: 1 MPQLRLALAQLNVTVGDLDGNADKIVSWTRNAVERGAHVIAFPELALTGYPVEDLALRGS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVV--------------GFPR--QDQEGVLNSVVILDA 105 F+ A S + TL D G G +V G R + + NS ++ Sbjct: 61 FVDASQSKVQTLARRLADEGLGDIVVVCGYLDRATGTAMGVDRLGRPKGSPTNSAAVIHQ 120 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 G ++ K +LPNY F E R F+ G + + + + ++ICED+W++ + Sbjct: 121 GKVVTSAVKHHLPNYGVFDEFRHFVPGDTLQVVRIHGVDVALVICEDLWQDGGPVAVTRA 180 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 GA L +N+SPY NK R E+V+ + P+ YVN VGGQDEL+FDG S D Sbjct: 181 AGAGLLLVVNSSPYEANKDDVRGELVSRRAREAGCPLAYVNLVGGQDELVFDGDSLIADA 240 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI------------------ 267 + ++ + F + + D L + D+ + I Sbjct: 241 EGKVFARAPQFEHGSMIV----DLDLPAATGIPVDAHEGIRIVHTVLHEEPLPAYEPIAV 296 Query: 268 ---PLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 P +EA+ Y A V LRDYV KN F V++GLSGGIDS+L AAIA DA+G E+V Sbjct: 297 AQAPRLSDEAELYAAIVTGLRDYVHKNGFTSVLLGLSGGIDSSLVAAIACDAIGAEHVVG 356 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 + P Y+S S +DAA A G Y V+PI +V F + +G+ EN+Q Sbjct: 357 VSNPSVYSSDHSKDDAAELAARTGLNYRVVPIQPMVQPFLDTLGL------TGLAEENLQ 410 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R+R I M LSN ++L NKSE+SVGY T+YGD GG+ PLKDL KT V +LA W Sbjct: 411 ARVRAVIWMGLSNADGHLVLACGNKSELSVGYSTIYGDAVGGYAPLKDLPKTLVRRLAKW 470 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 RN+ + GL P IP + + K PSAELRP Q D +SLPPY +LDD++ VE + Sbjct: 471 RNADAVAKGLQP---PIPENAIAKPPSAELRPGQVDTDSLPPYDLLDDMLDDYVEQDRGS 527 Query: 504 IN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ E V V L+ +EYKRRQ P G K++ K+FGRDR PI+N +R+ Sbjct: 528 AELVAAGFDPELVSKVIQLVDKAEYKRRQFPPGPKLSHKAFGRDRRLPITNAWRE 582 >gi|312128589|ref|YP_003993463.1| nad+ synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778608|gb|ADQ08094.1| NAD+ synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 540 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 214/567 (37%), Positives = 321/567 (56%), Gaps = 44/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K + + + +++F EL I GYPP+DL+F+K FI+ Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIEIIK--SHRDAKILIFPELAICGYPPKDLLFQKDFIE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + + D + ++VG P + + NS +IL G I + K LP+Y Sbjct: 59 AVDKAIEKIAKEVED--SYVIVGSPTKSHHVSKLFNSAIILYQGKIEKIIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R F + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFTPSPTREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELCQKGAKVFIN 176 Query: 174 LNASPYYHNKLK-KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ +R +++ + +P+IYVNQVGG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVLSSDGRLVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E ++ + D S A VL +RDY +K Sbjct: 237 AKEFEEDILEIELENIDKIPEIKIQEDISWIK------------KALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +AV+ALG+ENV + +P +Y+S S++DA + A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGRENVLGVSMPSRYSSEHSIKDAKSLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + PI D+ + + + E P + ENIQ+RIRGNILM +SN ++LTT NKSE Sbjct: 345 IYPIEDVFRAYLRMFNT--SETPLQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSE 402 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PS Sbjct: 403 LAVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPS 453 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE--YNDETVRYVEHLLYGSEYK 528 AELRP+Q DQ++LPPY +LD I+ +E ++S IN E Y E V V ++ +EYK Sbjct: 454 AELRPNQKDQDTLPPYEVLDPILVAYIEEQKS-INEIVEMGYPKELVLKVIKMVERAEYK 512 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R+QA G K+T+K+FG R PI ++ Sbjct: 513 RKQAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|157414047|ref|YP_001484913.1| NAD synthase [Prochlorococcus marinus str. MIT 9215] gi|157388622|gb|ABV51327.1| NAD synthase [Prochlorococcus marinus str. MIT 9215] Length = 565 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 220/575 (38%), Positives = 323/575 (56%), Gaps = 40/575 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A D +L EL + GYP DL+ KK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILYIASKACSISADFVLTPELSLWGYPANDLLLKKNLIK 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 ID L D + G I +G + + NS+ +L+ G + KI LP Sbjct: 61 NQYQIIDQLALDINKKYGNLSITIGIAEIINDSFFPNLYNSIALLEGGEWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F S +V + RLG ICED+W N +I LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLVKKIKNKMWRLGFTICEDLWVNKDIEGRGIHKKNPIIDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG+SF D Sbjct: 181 KKKVDILINLSASPYTFQKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGSSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE+ ++ W +Q + N + S+++ NA VL ++ Sbjct: 241 KNGSKIKQLKSFSEE--LSSWEINQMEPEKNKFENSEMSSIF----------NALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +IGLSGGIDSAL +AIA ALG +NV + +P K++S S DA AK Sbjct: 289 DYAKKCGFKTALIGLSGGIDSALVSAIATAALGSDNVYCVSMPSKWSSSHSKSDAKDLAK 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L ++++PI L+ F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLNINFNIIPIEKLMTSFEDSFVKTIDFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-----HGITSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYK+ VF+L +W +S H + L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKSNVFKLCNWLDSKDSINHRKSYMLNINEDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEY--NDETVRY 517 I +I +K+PSAEL P+Q D +SLPPY ILD+I+K I+E E+ + +EY E + Sbjct: 469 IGENIRKKAPSAELGPNQLDTDSLPPYSILDNILKGIIE-EKKDLKQLEEYGFKKELILK 527 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 + L+ +E+KR+QAP K++++S G D PI+ Sbjct: 528 IISLIKKAEFKRKQAPPILKLSSQSLGSDWRIPIA 562 >gi|212715673|ref|ZP_03323801.1| hypothetical protein BIFCAT_00573 [Bifidobacterium catenulatum DSM 16992] gi|212661040|gb|EEB21615.1| hypothetical protein BIFCAT_00573 [Bifidobacterium catenulatum DSM 16992] Length = 565 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 223/582 (38%), Positives = 324/582 (55%), Gaps = 43/582 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K R A +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDSNADKVMRYAHLAANNNAQVVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F +A + + L ++ G G +VVG D+E N +V+L G + A DK Sbjct: 61 FRKAAWNKANWLATELAADGLGDLFVVVGTVGTDRETSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L +Q + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVDGARIGVAICEDIWQDGGPVAELAEQHIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRLDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFVVDADGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + Q ++ P +EE Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLSFFDLDTAAEHQQVGVIAAK-------PDPDEEV-YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA AK +G YDV PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGSNVYGISMPSMYSSDGSKDDAADLAKNIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F S Q E G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PL---FVSFQKQLDLE---GVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG----------------PLTE-- 458 T+YGD GG+ P+KDL KT+V++++ WRN G+G PL + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNK-AAAEGMGIGGLHVVGNEQGSKGTPLPDGV 465 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVEN---EESFINNDQEYNDETV 515 +IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ E + + +++ TV Sbjct: 466 MIPVNSIEKAPSAELRPGQKDSDSLPEYELLDQVLAMYIEHAHGREDLLADG--FDETTV 523 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 524 DTVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|302550954|ref|ZP_07303296.1| NH(3)-dependent NAD(+) synthetase [Streptomyces viridochromogenes DSM 40736] gi|302468572|gb|EFL31665.1| NH(3)-dependent NAD(+) synthetase [Streptomyces viridochromogenes DSM 40736] Length = 603 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 211/597 (35%), Positives = 315/597 (52%), Gaps = 52/597 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+A N R + QG L+ F E+ ++GYP EDL + S Sbjct: 20 VPQLRLALNQIDSSVGDLAQNAESIVRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSS 79 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F++A +A+ +L + D G G ++VG+ P+ Q N+ +L G + Sbjct: 80 FVEASRAALRSLAARLADEGFGELPVIVGYLDRSATAQPKYGQPAGAPQNAGAVLYGGEV 139 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G S + + + + ICED+W++ + A Sbjct: 140 VLNYAKHHLPNYGVFDEFRYFVPGDSMPVLRVHGVDVALAICEDLWQDGGRVPAARSARA 199 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY NK R ++V + Y+ +GGQDEL+FDG S D + Sbjct: 200 GLLLSINASPYERNKDDTRLDLVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDKNGE 259 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIP-------- 268 + + FSE + + D L + + Y P Sbjct: 260 VVARAPQFSEGCVVLDLDLPAASPDAPTGVVDDGLRIDRVVLSEEPLAAYEPELTGGYAD 319 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR YV KN F V+IGLSGGIDS+L AAIA DA+G +NV + +P Sbjct: 320 RLDDDEEVYSALVVGLRAYVAKNGFTSVLIGLSGGIDSSLVAAIACDAVGAQNVYGVSMP 379 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR+R Sbjct: 380 SKYSSDHSKDDAAELARRTGLNYRTVAIEPMFDAYMGSLRL------TGLAEENLQSRLR 433 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT +F+L+ WRN Sbjct: 434 GTLLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSIFRLSEWRNRA 493 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES----- 502 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 494 ARERGQTP---PIPENSITKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDRGADEIV 550 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 D +T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N +R+ + Sbjct: 551 AAGYDPALVTKTLRMVDT----AEYKRRQYPPGTKISPKGFGKDRRLPITNGWRESV 603 >gi|91070196|gb|ABE11117.1| carbon-nitrogen hydrolase:NAD+ synthase [uncultured Prochlorococcus marinus clone HF10-11D6] Length = 565 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 213/574 (37%), Positives = 320/574 (55%), Gaps = 38/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A+ D +L EL + GYP DL+FKK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILNIASKASSISADFVLTPELSLWGYPANDLLFKKNLIE 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 +D L D H G I +G + + + NS+ +++ G + KI LP Sbjct: 61 NQYQILDQLALDIHKKYGNLSISIGIAEKVNDSFFPNLYNSIALVEGGEWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F S ++ + RLG ICED+W N NI LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLIKQIKNKTWRLGFTICEDLWVNKNIEGRGIHRKNPIIDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R +I + ++ +P+IYVNQ+G D LIFDG SF D Sbjct: 181 KKKVDILVNLSASPYTLKKLELRSKISSFAAQYLQVPLIYVNQIGANDNLIFDGNSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE ++ W +Q + N + S+++ +A VL ++ Sbjct: 241 KNGSKIKQLKSFSED--LSSWEIEQTKPEKNEFKNSEMSSIF----------DALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F ++GLSGGIDSAL +AIA ALG +NV + +P K++S S DA A+ Sbjct: 289 DYAKKCGFKTALVGLSGGIDSALVSAIATAALGSDNVYCVSMPSKWSSSHSKSDAKDLAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + +PI +L+ F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLKISFKSIPIENLITSFEESFIKTISFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L W +S + L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCDWLDSEDSINSRKLYMLDTSVDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYV 518 I +I +K+PSAEL P+Q D +SLPPY +LD I+K I+E ++ +++ + + + + Sbjct: 469 IGENIRKKAPSAELGPNQLDTDSLPPYSVLDKILKGIIEEKKDLQQLEEDGFKKDLILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ +E+KR+QAP K++++S G D PI+ Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRVPIA 562 >gi|256419265|ref|YP_003119918.1| NAD+ synthetase [Chitinophaga pinensis DSM 2588] gi|256034173|gb|ACU57717.1| NAD+ synthetase [Chitinophaga pinensis DSM 2588] Length = 554 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 216/571 (37%), Positives = 320/571 (56%), Gaps = 39/571 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ N +G+ N K + A QG DL++FTEL + GYPP D + FIQ Sbjct: 1 MKIILAQQNYHIGNFELNTQKILEGIKAAEAQGADLVVFTELCVCGYPPRDFLEFDDFIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQ-EG--VLNSVVILDAGNIIAVRDKINLPNY 120 +AID +K+ H ++VG P R Q EG + N+ L G + + K LP Y Sbjct: 61 QSYAAIDKIKA--HTSNIAVLVGAPCRNTQPEGKDLFNAAWFLHEGEVKQIIHKTLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-----IC--KHLKKQGAEFLFS 173 F E R F GY+ + + F+ +L + ICEDIW + IC L +Q + + + Sbjct: 119 DVFDEYRYFEPGYAWNVVPFKGKKLAVTICEDIWNLGDNPLYRICPMDQLIEQQPDVMIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 L+ASP+ +N + R +I+ + +P+ Y N VG Q E++FDG S FD Q + ++ Sbjct: 179 LSASPFDYNHAQDRKKIIRENVKKYGIPMYYCNAVGSQTEIVFDGGSVIFDKQGNIVKEL 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYN------ACVLSLRDYV 287 +F E E + + L Q + + A YIP+ E +YN A ++ ++DY Sbjct: 239 PYFEEA---IEGYDLEVLLQSEQPAPEPA---YIPVNELLPEYNIDRIYHAIIMGIKDYF 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 QK F K I+G SGGIDSA+ A+A +ALGKENV+ I++P Y++ S++DA A +K L Sbjct: 293 QKMGFTKAILGSSGGIDSAVTLALAAEALGKENVRAILMPSPYSTEHSVDDAVALSKNLD 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 YD++ I+D+ F ++ F + P + EN QSRIRGN+LM LSN +LL TSN Sbjct: 353 NPYDIIRINDIYETFLQTLNPFFEGRPFNVAEENTQSRIRGNLLMGLSNKFGYILLNTSN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE+S GYGTLYGDM+GG L D+YK QV+ LA + N E+IP +I++K Sbjct: 413 KSELSTGYGTLYGDMAGGLAVLGDVYKMQVYALARYINRD---------KEIIPANIIDK 463 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYG 524 +PSAELRP+Q D +SLP Y +LD I+ + +E + I Q ++ V ++ Sbjct: 464 APSAELRPNQKDSDSLPDYTVLDSILYQYIERRQGPKEIIA--QGFDAALVTRTLKMVNT 521 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +EYKR Q ++++K+FG R PI K+ Sbjct: 522 NEYKRNQFCPIIRVSSKAFGVGRRVPIVGKY 552 >gi|116748019|ref|YP_844706.1| NAD+ synthetase [Syntrophobacter fumaroxidans MPOB] gi|116697083|gb|ABK16271.1| NH(3)-dependent NAD(+) synthetase [Syntrophobacter fumaroxidans MPOB] Length = 552 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 211/570 (37%), Positives = 314/570 (55%), Gaps = 42/570 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAI Q++P +GD GN AK + A R+G DL++F E+ + GYPP DL+ K SF++ Sbjct: 1 MRIAIGQIDPFIGDFKGNAAKICDGVDRARREGCDLVVFPEMALIGYPPRDLLDKPSFVR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV----LNSVVILDAGNIIAVRDKINLPNY 120 + ++ + G G++ G ++ G N+ V D G A+ K+ LP+Y Sbjct: 61 TSREHWEAIREASR--GIGVIFGAVDENPNGTGKPYHNAAVFFDDGKPAAIAHKMLLPSY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEF 170 F E+R F G + FR RLGI ICED+W + + + L++ Sbjct: 119 DVFDEERYFEPGKHATWVDFRGERLGITICEDVWNVPRFLPRRLYHCDPIRELEQASVSV 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +++ASPY+ K E++ +IYVNQVGG DELIF G S +D +L Sbjct: 179 IVNISASPYHVGKASYVGELLRSHAQRSGTQVIYVNQVGGNDELIFHGHSMVWDEAGKLV 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 F E +F+ YD + + + + E A VL LRDYV+KN Sbjct: 239 ASAADFRE-DFVV---YDTRTH--------AGKLHAVGGDQAEEVIEALVLGLRDYVRKN 286 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F K ++GLSGG+DSAL +AV ALG ENV + +P + +P+SLEDA A+ LG + Sbjct: 287 RFGKAVVGLSGGVDSALTVCLAVLALGAENVLGVGMPGPFNAPESLEDAKELARRLGIAF 346 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + +PI DL + ++ +P + EN+Q+RIRG ILMA+SN +LL+T NKSE Sbjct: 347 ETVPIGDLFDAALRTLAPPFHGQPRDVTEENLQARIRGMILMAISNKFNRILLSTGNKSE 406 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 I+VGY TLYGDM+GG + L D+ KT V++LA N+ + IP L ++PS Sbjct: 407 IAVGYCTLYGDMNGGLSVLGDVPKTMVYELARKLNAQ---------HDWIPERTLVRAPS 457 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEY 527 AELRP QTDQ++LPPY +LD I+ VE E ++ ++ V++V + +EY Sbjct: 458 AELRPDQTDQDTLPPYEVLDAILADYVEKRLPAEEIASHG--WDAALVKWVTDRVDCNEY 515 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 KR QAP ++T K+FG R PI++ +R+ Sbjct: 516 KRWQAPPILRVTTKAFGMGRRNPIAHGYRE 545 >gi|311895757|dbj|BAJ28165.1| putative glutamine-dependent NAD(+) synthetase [Kitasatospora setae KM-6054] Length = 581 Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 215/591 (36%), Positives = 309/591 (52%), Gaps = 48/591 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q++P VGD+A N + R + A G DLI F E+ ++GYP EDL F+ S Sbjct: 1 MPNLRLALCQIDPWVGDLARNSEEVLRWSKRAAASGADLIAFPEMVLTGYPVEDLAFRGS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL------NSVVILDAGNIIAVR 112 F++ +A+ L + G G +VVG+ + + G N +L G ++ Sbjct: 61 FVEGSRAALVELAARLAAEGLGDVPVVVGYLGRGEPGSRYAGRPQNCAAVLRGGEVVTRF 120 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 K LPNY F E R F+ G + + + + ICEDIW+ + A L Sbjct: 121 AKHFLPNYGVFDEYRYFVPGDQLTVLRLHGVDVALAICEDIWQEGGRVAATGQAAAGLLL 180 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 S+N SPY +K R E+V + + P++Y+N VG QDEL+FDG S +L + Sbjct: 181 SVNGSPYERDKDDVRLELVRRRAAEAGCPLVYLNMVGAQDELVFDGESMVVAADGELLAR 240 Query: 233 MKHFSEQNFMTEWHY----DQQLSQWNYMSDDS-------------------ASTMYIPL 269 F E + + + L ++D A + L Sbjct: 241 GPQFEEALLVLDLELPAAKEDGLPDGTVLADGLRLTRVDLGGAPKERPAEPIAPEVVERL 300 Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 +E Y A V R YV+KN V+IGLSGGIDSAL AAIAVDA+G ENV + +P + Sbjct: 301 DDEAEVYAALVEGTRAYVRKNGMRSVLIGLSGGIDSALVAAIAVDAIGAENVYGVSMPSR 360 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 Y+S S +DAA A+ G + + I + + + E +G+ EN+QSR+RG Sbjct: 361 YSSQHSRDDAAELARRTGLHFRTVSIAPMFDAYLG------ATELTGLAEENLQSRLRGT 414 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 LLMAISNQEGQIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTLVFRLARWRNEAAE 474 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-- 507 G P IP + + K PSAELRP Q D +SLP Y +LD ++ R VE +E D Sbjct: 475 ARGEVP---PIPENTIVKPPSAELRPDQKDTDSLPDYDLLDAVLARYVEGDE---GRDAI 528 Query: 508 --QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + E V V L+ +EYKRRQ P G K++ K+FGRDR PI+N++R Sbjct: 529 VAAGFPAEVVDRVVRLVDTAEYKRRQYPPGPKVSPKNFGRDRRLPITNRWR 579 >gi|291302410|ref|YP_003513688.1| NAD+ synthetase [Stackebrandtia nassauensis DSM 44728] gi|290571630|gb|ADD44595.1| NAD+ synthetase [Stackebrandtia nassauensis DSM 44728] Length = 586 Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 217/596 (36%), Positives = 326/596 (54%), Gaps = 55/596 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L++A+AQ N VGD+ GN A A R G ++ F E+ ++GYP EDLVF++S Sbjct: 1 MRTLRLALAQTNSTVGDLDGNAAAVVEWTARAKRAGAHMVAFGEMMLTGYPVEDLVFRES 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVV---------GFPRQDQE-----GVLNSVVILDAGN 107 F++A ++ L S+ + G G +V G R D + G +++ +L +G Sbjct: 61 FVRASRQRVERLASELAEAGLGGIVVVVGYLDADGPARMDADADPGVGPRDALAVLHSGR 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 ++ K +LPNY F E R F+SG + + + + + + +CEDIW+ ++ G Sbjct: 121 VVTRYFKHHLPNYGVFDEDRYFVSGDTLEVVRVGGVDVAVTVCEDIWQPGGPFAVARQAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + ++NASP+ +K R +V + + + + YVN +GGQDEL+FDG + Sbjct: 181 VGLVVNINASPFERDKDDTRLSLVKRRAAEANATVAYVNVIGGQDELVFDGDTMIVKADG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI-------------------- 267 +L + F+E+ + + +D ++D + + + Sbjct: 241 ELVLRGPRFTEELLLADLTFDDA-GDVPEVTDAAMAVRHTEISGGSLPLRRNLITPVKTE 299 Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 PL + + A L LRDYV KN F V+ GLSGGIDSA+ AA+AVDALG + V + P Sbjct: 300 PLSDLAEVWGALTLGLRDYVDKNGFASVLFGLSGGIDSAVVAALAVDALGPDRVHAVSNP 359 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 +Y+S S +DAA A+ G Y V PI +V+ + S +S SG+ EN+Q+R+R Sbjct: 360 SQYSSQHSRDDAADLAQRTGLHYLVEPIQTIVDAYLSQLSL------SGVAVENLQARVR 413 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G I MALSN ++L NKSE +VGY TLYGD GG+ P+KD+ KT VF+LA WRN+ Sbjct: 414 GVIWMALSNQHGHLVLAAGNKSEYAVGYSTLYGDAVGGYAPIKDVPKTLVFELAKWRNAE 473 Query: 448 GITSG-LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES---- 502 G + P IP +I+ K PSAELRP Q D +SLPPY +LD I+ V+ + Sbjct: 474 AKRRGEVAP----IPDNIITKPPSAELRPDQVDTDSLPPYEVLDAILAGYVDGDAGRDDL 529 Query: 503 -FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +D D +R V+ +EYKRRQ+ GTK+T KSFGRDR PI+N+FR+ Sbjct: 530 VAAGHDPAIVDRILRLVDI----AEYKRRQSAPGTKVTGKSFGRDRRLPITNRFRE 581 >gi|94969551|ref|YP_591599.1| NH(3)-dependent NAD(+) synthetase [Candidatus Koribacter versatilis Ellin345] gi|94551601|gb|ABF41525.1| NH(3)-dependent NAD(+) synthetase [Candidatus Koribacter versatilis Ellin345] Length = 556 Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 219/567 (38%), Positives = 306/567 (53%), Gaps = 41/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q+NP VGD GN K A G ++ILF EL I GYPP DLV + +F+ Sbjct: 10 VKIALGQINPTVGDFVGNAEKIVHYAARARTAGAEVILFPELSICGYPPRDLVERATFVA 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF--PRQDQEG--VLNSVVILDAGNIIAVRDKINLPNY 120 + + T G +V G P + G V+NS +L G I+ V+ K LP Y Sbjct: 70 HNREIAEAIARMTV--GITVVAGLVTPANGKTGKSVMNSAAVLRDGRIVHVQSKRLLPTY 127 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI----------CKHLKKQGAEF 170 F E R F + + + ICED W + N + L G + Sbjct: 128 DVFDEMRNFAPADHQELFCQGSTSIALTICEDAWNDKNFWDRRLYGNDPVEDLMVGGGKL 187 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +++ASP+Y K + R +++T H + NQVGG D ++FDG+S + Sbjct: 188 LLNISASPFYVAKQELRRKMLTAIARKYHTVVAMCNQVGGNDSIVFDGSSVVIGPDGSVI 247 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQK 289 Q + F E + +D ++ L E+A+ Y A VL RDYV K Sbjct: 248 AQARSFEEDLIFCD-------------TDALTGDIHPELGSEDANAYAALVLGTRDYVGK 294 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F KVIIGLSGGIDSAL AAIAVDALG ENV + +P Y+S S++DAAA A+ LG + Sbjct: 295 CGFRKVIIGLSGGIDSALTAAIAVDALGAENVMGVGMPGPYSSQGSIDDAAALAENLGIR 354 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 ++++PI D+V F + ++ ENIQ+R RGNILM+LSN AM+L+T NKS Sbjct: 355 FEIVPIGDVVQAFRNTLAPVFSGFHEDTTEENIQARTRGNILMSLSNKFGAMVLSTGNKS 414 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + D+ KT V++L SH + G E+IP + + K P Sbjct: 415 ELAVGYCTLYGDMAGGLAVISDVPKTMVYRL-----SHYVNRG----REIIPQNTITKPP 465 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLYGSEY 527 SAELRP+Q D +SLP Y +LD I+ VE +S I ++ VR V L+ +EY Sbjct: 466 SAELRPNQKDTDSLPEYEVLDAILDDYVEEMKSAKEIAEAHGFDIALVRRVIALIERTEY 525 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNK 554 KR+QA G KI+ K+FG R +PI+ + Sbjct: 526 KRQQAAPGLKISTKAFGVGRRFPIAAR 552 >gi|254448980|ref|ZP_05062434.1| glutamine-dependent NAD+ synthetase signal peptide protein [gamma proteobacterium HTCC5015] gi|198261374|gb|EDY85665.1| glutamine-dependent NAD+ synthetase signal peptide protein [gamma proteobacterium HTCC5015] Length = 543 Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 216/562 (38%), Positives = 314/562 (55%), Gaps = 44/562 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L I + Q NP VGD++GNI A + + L + EL ++GYPPEDL+++ +F+ Sbjct: 13 LGIRLIQCNPKVGDLSGNIDMIAAAVNGTDCEA--LCVLPELALTGYPPEDLLYRDAFMD 70 Query: 65 ACSSAIDTL--KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + ++DTL + +H +++G P +++ + N+ +L G I++V K LPNY Sbjct: 71 EVALSLDTLAQRCASH----ALLLGAPLKEEGRLYNAAFLLQGGEIVSVYRKRVLPNYGV 126 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E+R F G + R+G+ +CED+W+ E + S+NASP++ Sbjct: 127 FDERRYFSEGDQVGVMEVNGHRIGVCVCEDLWQ-PEPAASCASANVEVIVSMNASPFHVG 185 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K +R + + LPI YVN GGQDE++FDG SF G+ +L Q + S + + Sbjct: 186 KQAEREATAAARAAETGLPIAYVNLWGGQDEVVFDGGSFFMSGEGEL--QNRIASGGDGV 243 Query: 243 TEWHYDQQLSQWNYM----SDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 E DQ+ QW DDS A Y A ++ DY+ KN F V++G Sbjct: 244 LEASLDQK--QWRVADATCEDDS---------NLAALYRALTIATSDYINKNGFKGVVLG 292 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A+AVDALG + V+ +M+P +YTS SL+DAA A+ G Y + I Sbjct: 293 LSGGIDSALVLALAVDALGADRVEAVMMPSRYTSQMSLDDAAQIAENFGVAYHTVSIEPS 352 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + + + EN+Q+RIRG +LMALSN ++L T NKSE +VGY TL Sbjct: 353 FDAALNALQPLFGGAAVDTTEENMQARIRGLMLMALSNKKGLLVLPTGNKSEYAVGYSTL 412 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GGF PLKD+ K++VF L+ WRN +G E+IP I+++ PSAEL P Q Sbjct: 413 YGDMVGGFAPLKDVSKSRVFALSRWRNRNG---------EMIPQRIIDRPPSAELAPDQK 463 Query: 479 DQESLPPYPILDDIIKRIVENEES---FINNDQEYND--ETVRYVEHLLYGSEYKRRQAP 533 D++SLP Y ILD I++ +E +S I + +D +TVR V +EYKRRQA Sbjct: 464 DEDSLPAYEILDQILELYIEGAQSPQEIIAKGFKADDVNDTVRRVNL----NEYKRRQAA 519 Query: 534 VGTKITAKSFGRDRLYPISNKF 555 G K+T +FGR+R YPI++ F Sbjct: 520 PGPKVTPCAFGRERRYPITSGF 541 >gi|126696974|ref|YP_001091860.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9301] gi|126544017|gb|ABO18259.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9301] Length = 565 Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 214/574 (37%), Positives = 321/574 (55%), Gaps = 38/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A+ D +L EL + GYP DL+FKK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAQKILNIASKASSISADFVLTPELSLWGYPANDLLFKKNLIK 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 S +D L D + G I VG + + + NS+ +++ G + KI LP Sbjct: 61 NQSQILDQLALDINKKYGNLSITVGIAEKVNDSFFPNLYNSIALVEGGEWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F S ++ + RLG ICED+W N +I LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLIKQIKNKTWRLGFTICEDLWVNKDIEGRGIHRKNPIIDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG SF D Sbjct: 181 KKKVDILVNLSASPYTLKKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGNSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE ++ W +Q + N + S+++ +A VL ++ Sbjct: 241 KNGSKIKQLKSFSED--LSSWEIEQTKPEKNEFKNSEMSSIF----------DALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F ++GLSGGIDSAL +AIA ALG +NV + +P K++S S DA A+ Sbjct: 289 DYAKKCGFKTALVGLSGGIDSALVSAIATAALGSDNVYCVSMPSKWSSSHSKSDAKDLAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + +PI +L++ F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLKISFKSIPIENLMSSFEESFIKTISFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L +W +S + L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCNWLDSEDSINSRKLYMLNTSVDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYV 518 I +I K+PSAEL P Q D +SLPPY ILD I+K I+E ++ +++ Y + + + Sbjct: 469 IGENIRTKAPSAELGPDQLDTDSLPPYSILDKILKGIIEEKKDLQQLEEDGYKKDLILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ +E+KR+QAP K++++S G D PI+ Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRVPIA 562 >gi|72161387|ref|YP_289044.1| NH(3)-dependent NAD(+) synthetase [Thermobifida fusca YX] gi|71915119|gb|AAZ55021.1| NH(3)-dependent NAD(+) synthetase [Thermobifida fusca YX] Length = 577 Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 211/592 (35%), Positives = 311/592 (52%), Gaps = 62/592 (10%) Query: 9 IAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +AQ+NP VGD+ GN + RRA + G L++F E+ ++GYP EDL + +F+ Sbjct: 1 MAQVNPTVGDLEGNSDLIVDYTRRAAD----AGAHLVVFPEMVLTGYPVEDLALRGAFVD 56 Query: 65 ACSSAIDTLKSDTHDGGAG---IVVGF---------PRQDQEGVL--NSVVILDAGNIIA 110 A +A+ L D G G + VG+ P + Q N+V +L G + Sbjct: 57 ASITALHALARRLADTGLGDLPVAVGYLDRHRNTVAPTRGQPAGAPHNAVALLYQGQPVF 116 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K +LPNY F E R F+ G + + I + +ICED+W++ +++ A Sbjct: 117 TSAKHHLPNYGVFDEARNFVPGTTLPVVRLHSIDVAFVICEDLWQDGGPVAAVREAEAGL 176 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +N SPY K R E+ T + + YVN VGGQDEL+FDG S +L Sbjct: 177 LVVINGSPYERGKRDTRLELCTRRARETQATVAYVNLVGGQDELVFDGDSLIVHPDGRLL 236 Query: 231 FQMKHFSEQNFMTEWHYDQQLS--QWNYMSDDSASTM-------------------YIPL 269 + F E + + + W +D T+ P Sbjct: 237 ARAPQFEEHLLVADLELPDAVGAGMWGASADAPGITIQRHLVSADPVPAYEPQPAPLAPR 296 Query: 270 QEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 ++E + Y A VL+ RDYV KN F V++GLSGGIDSAL A IAVDALG + V +++P Sbjct: 297 RDEIGEVYAALVLATRDYVHKNRFPSVLLGLSGGIDSALVATIAVDALGADRVHGVLMPS 356 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +Y++ S+ DA A+ G ++P+ LV F + + G+ EN+Q+R+RG Sbjct: 357 RYSTDHSVTDAEELARRQGINARIIPVAPLVEAFENAVKV------DGLAEENLQARVRG 410 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +LM LSN ++LTT NKSE++VGY TLYGD +GGF P++D++KT V++LA WRN+ Sbjct: 411 QLLMTLSNQEGHLVLTTGNKSELAVGYSTLYGDSAGGFAPIRDVWKTLVWELARWRNAEA 470 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-----ENEESF 503 +G P IP + K PSAELRP Q D +SLP Y +LD ++ V +E Sbjct: 471 ERNGQVP---PIPEHSITKPPSAELRPGQLDTDSLPEYDVLDALLDDYVGTDLGRDELVA 527 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +D E D +R V+ +EYKRRQ P G KI+ ++FGRDR PI++++ Sbjct: 528 AGHDPELVDRVIRMVDR----AEYKRRQYPPGPKISTRNFGRDRRVPITSRW 575 >gi|254525359|ref|ZP_05137411.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9202] gi|221536783|gb|EEE39236.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9202] Length = 565 Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 218/574 (37%), Positives = 323/574 (56%), Gaps = 38/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A D +L EL + GYP DL+ KK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILYIASKACSISADFVLTPELSLWGYPANDLLLKKNLIK 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 ID L D + G I VG + + NS+ +L+ G + KI LP Sbjct: 61 NQYQIIDQLALDINKKYGNLSITVGIAEIINDSFFPNLYNSIALLEGGEWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI----RLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F S +V + RLG ICED+W N +I LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLVKKVKNKMWRLGFTICEDLWVNKDIEGRGIHKKNPIVDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG+SF D Sbjct: 181 KKKVDILINLSASPYTFKKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGSSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE+ ++ W +Q + N + S+++ NA VL ++ Sbjct: 241 KNGSKIKQLKSFSEE--LSSWEINQIEPEKNKFENSEMSSIF----------NALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +IGLSGGIDSAL + IA ALG +NV + +P K++S S DA AK Sbjct: 289 DYAKKCGFKTALIGLSGGIDSALVSVIATAALGSDNVYCVSMPSKWSSSHSKSDAKDLAK 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L ++++PI +L+ F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLNINFNIIPIENLMTSFEESFIKTIDFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-----HGITSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYK+ VF+L +W +S H + L + ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKSNVFKLCNWLDSKDSINHRKSYMLDIIEDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I +I +K+PSAEL P+Q D +SLPPY ILD+I+K I+E ++ ++ Y E + + Sbjct: 469 IGENIRKKAPSAELGPNQLDTDSLPPYSILDNILKGIIEEKKDLKQLEEYGYKKELILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ +E+KR+QAP K++++S G D PI+ Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRIPIA 562 >gi|224370800|ref|YP_002604964.1| NadE [Desulfobacterium autotrophicum HRM2] gi|223693517|gb|ACN16800.1| NadE [Desulfobacterium autotrophicum HRM2] Length = 544 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 224/567 (39%), Positives = 313/567 (55%), Gaps = 39/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ NPV+GD NI + EA G +LI+F EL ISGYPP DL+ + FI Sbjct: 1 MKIAMAQTNPVIGDFDFNIQAMIKRALEARALGCELIVFPELSISGYPPGDLLERNDFID 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPR----QDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +A+ L G G++ G Q + + NS ++ + NI+A DK LP Y Sbjct: 61 NQLNALQELIHSIR--GIGVLCGVVNREICQGERRLFNSALLFEEQNILARTDKQLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEF 170 F E R F G + I ++ + LGI ICEDIW + N L GA+ Sbjct: 119 DIFDELRYFTPGPKSSLISYKGLNLGITICEDIWNDEAGLGQKHYDRNPVADLASLGADL 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 ++ ASP++ K R+ ++ +H + P+I+VNQVGG D +FDG S Q ++A Sbjct: 179 FINIAASPFHGGKQDLRNTLLKKITAHYNRPLIFVNQVGGNDSTLFDGLSLALTAQGEVA 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + FSE + + + +DD +A A V+ RDYV K Sbjct: 239 ARAMDFSEDLVVFDTTTQKGDCHGVSTTDD------------QAILKALVMGTRDYVTKC 286 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F + IIG SGGIDSAL AAIAV ALG++NV+TI +P YTS Q++ED A A LG + Sbjct: 287 GFKQAIIGSSGGIDSALTAAIAVAALGRKNVKTIFMPSIYTSKQNIEDTKALALNLGISW 346 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +PI + + F +L F E P GI +NIQ+RIRG ILMA SN +MLL T NKSE Sbjct: 347 QSIPIAPMYDAFLTLSDTFNPENP-GITEQNIQARIRGTILMAFSNKEGSMLLATGNKSE 405 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM GG + DL K +V++++ N + IP SILEK+PS Sbjct: 406 MAVGYSTLYGDMCGGLAVIGDLPKKKVYEISRLINRE---------RKTIPLSILEKAPS 456 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKR 529 AEL P QTDQ+ LP Y I+D ++K VE+ +S + Q + TV + + +EYKR Sbjct: 457 AELAPDQTDQDDLPSYDIIDAVVKAHVEDHQSIEDMVTQGLDRSTVNEIVQRITRNEYKR 516 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFR 556 QAP ++TAK+FG R +P++ ++R Sbjct: 517 YQAPPILRVTAKAFGAGRRHPMAQRYR 543 >gi|220907650|ref|YP_002482961.1| NAD synthetase [Cyanothece sp. PCC 7425] gi|219864261|gb|ACL44600.1| NAD+ synthetase [Cyanothece sp. PCC 7425] Length = 558 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 226/567 (39%), Positives = 318/567 (56%), Gaps = 31/567 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP+VGD+ GN R A +A G +L++ EL + GYPP DL+ + SFI Sbjct: 1 MKIAIAQLNPLVGDLKGNSQLIRNAAAQAVAAGAELLITPELALCGYPPRDLLIEPSFIS 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A ++ L G G VV + + + NSV +L G I K LP Y Sbjct: 61 ALQQQLEQLAQQLPAGLTTLVGTVVPNLQVGGKPLFNSVALLAEGKIQQTFTKRLLPTYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEFL 171 F E R F G + ++ +R+G+ ICED+W + + L QG + + Sbjct: 121 VFDEDRYFEPGRQTNLLITAQLRIGVTICEDLWNDELFWQRRLYTVDPLAELASQGVDLI 180 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 + +ASP+ K + R I+ PI+YVNQVGG D+LIFDG S D Q ++ Sbjct: 181 LNCSASPFSVGKQQLRERILEHAARRYQQPIVYVNQVGGNDDLIFDGRSVVVDRQGEVIA 240 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDYVQK 289 + K F + EW ++Q D P E+E + A VL ++DY QK Sbjct: 241 RAKAFESDLLVLEWDQEEQ---------DFRPAKCAPQPEDEIAEIWAALVLGVKDYAQK 291 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F + +IGLSGGIDSAL AAIA ALG ENV +++P Y+S S+ DA A A+ LG + Sbjct: 292 CKFAQAVIGLSGGIDSALVAAIATAALGAENVLGVLMPSPYSSDHSISDALALAQNLGIR 351 Query: 350 YDVLPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 LPI +L+ + ++L+ F P GI ENIQ+RIRGN+LMA++N +L++T NK Sbjct: 352 TQTLPIAELMQTYDYTLIPLFSGTNP-GIAEENIQARIRGNLLMAIANKFGYLLISTGNK 410 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++VGY TLYGDMSGG + DL KT+V+ + W N G E IP ++L K+ Sbjct: 411 SEMAVGYCTLYGDMSGGLAAIADLPKTKVYAVCRWLNDQAKLQG----KEAIPQNVLAKA 466 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEY 527 PSAEL+P QTDQ+SLPPY +LDDI+ R++E +S +D TV V L++ +E+ Sbjct: 467 PSAELKPGQTDQDSLPPYEVLDDILDRLIEQHQSVEEMVAAGHDLATVERVIQLVHRAEF 526 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNK 554 KRRQA G K+T ++FG PI+ + Sbjct: 527 KRRQAAPGLKLTPRAFGSGWRMPIAAR 553 >gi|153003186|ref|YP_001377511.1| NAD+ synthetase [Anaeromyxobacter sp. Fw109-5] gi|152026759|gb|ABS24527.1| NAD+ synthetase [Anaeromyxobacter sp. Fw109-5] Length = 567 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 214/577 (37%), Positives = 308/577 (53%), Gaps = 32/577 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +IA+AQ+N VGD AGN AK R E A +G L++F EL + GYPP D + Sbjct: 1 MAPTGRIALAQVNTTVGDFAGNAAKIRAVTERARAEGATLVVFPELALCGYPPRDFLDLP 60 Query: 61 SFIQACSSAIDTLKSDTH-DGGAGIVVGFPR----QDQEGVLNSVVILDAGNIIAVRDKI 115 F++ + + L + IVVGFP GV N+ ++ G + AV K Sbjct: 61 EFLERAARTLAELAAPAEWSRDVAIVVGFPEGVAGAPPPGVYNAAALIADGRVAAVGRKS 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKH----------L 163 LP Y F E R F+ S+ + RLG+ +CED+W + H L Sbjct: 121 LLPTYDVFDETRYFLPSDSSTAADAGGVGLRLGLSVCEDVWNDKRFWVHPRYARDPIAEL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 + GA + +++ASPY K R +++ + PI YVNQVGG D L+FDG S Sbjct: 181 VRGGAGLVVNISASPYAMGKPGLRERMLSASAAGHGAPIAYVNQVGGNDALVFDGGSMLV 240 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 + + F E + E S D A P E + Y+A VL + Sbjct: 241 GSDGAILARAPLFEEVLLVAELATGAA-SAVPLGRDGVAVAPGAPDPEADEVYSALVLGV 299 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDYV+K F I+GLSGGIDSAL A +A DALG NV + +P +Y+S S EDAAA A Sbjct: 300 RDYVRKCGFRSAIVGLSGGIDSALTACLAADALGAANVLGVAMPSRYSSGHSREDAAALA 359 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-NIQSRIRGNILMALSNHSKAML 402 LG + + I + F + + + +P G +AE N+Q+RIRG +LMALSN + ++ Sbjct: 360 DHLGIPFKEISIEPMHAAFLGQI-EAAEGKPLGDLAEQNVQARIRGQLLMALSNDTGGLV 418 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L+T NKSE++VGY TLYGDM+GG + D+ KT V++++ N+ + +IP Sbjct: 419 LSTGNKSELAVGYCTLYGDMAGGLAVIGDVPKTLVYRVSRAANARAGRT-------LIPE 471 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVE 519 K PSAEL+P Q DQ+SLPPY +LDDI++ VE ++ + + + + TVR V Sbjct: 472 RTFTKPPSAELKPGQVDQDSLPPYDVLDDILEAYVEERLPLDAIVA--RGHPEATVRRVL 529 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ SEYKRRQA K++ K+FG R +PI++ +R Sbjct: 530 RMVVASEYKRRQAAPVLKVSEKAFGEGRRFPIAHGYR 566 >gi|146295195|ref|YP_001178966.1| NAD+ synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145408771|gb|ABP65775.1| NH(3)-dependent NAD(+) synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 540 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 212/566 (37%), Positives = 316/566 (55%), Gaps = 42/566 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K R + + + +++F EL I GYPP+DL+F+K FI+ Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIRIIK--SHRDAKILIFPELAICGYPPKDLLFQKDFIE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + + D + +VVG P + + NS +IL G I + K LP+Y Sbjct: 59 AAYKAIEEIAKEVED--SFVVVGSPTKSHHVSKLFNSAIILHQGKIEKIIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R FI + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFIPSPAREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELSQKGAKVFIN 176 Query: 174 LNASPYYHNKLK-KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ +R +++ + +IYVNQVGG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGTAVIYVNQVGGNDELIFDGNSVVVSSDGRLVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E + ++ + D S A VL +RDY +K Sbjct: 237 AKEFEEDILEIKLEKIDKMPEVEIHEDISWIK------------KALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +AV+ALG ENV + +P +Y+S S++DA + A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGPENVLGVAMPSRYSSEHSIKDAKSLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + PI D+ + + + E P + ENIQ+RIRGNILM +SN ++LTT NKSE Sbjct: 345 IYPIEDVFKAYLRMFNT--SEMPLQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSE 402 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PS Sbjct: 403 LAVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPS 453 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKR 529 AELRP+Q D +SLPPY ILD I+ +E +S Q Y + V + ++ +EYKR Sbjct: 454 AELRPNQKDTDSLPPYEILDPILVAYIEELKSVDEIVQMGYPKDLVLKIIKMVERAEYKR 513 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKF 555 +QA G K+T+K+FG R PI ++ Sbjct: 514 KQAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|307717738|ref|YP_003873270.1| glutamine-dependent NAD(+) synthetase [Spirochaeta thermophila DSM 6192] gi|306531463|gb|ADN00997.1| probable glutamine-dependent NAD(+) synthetase [Spirochaeta thermophila DSM 6192] gi|315187354|gb|EFU21110.1| NAD+ synthetase [Spirochaeta thermophila DSM 6578] Length = 549 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 219/569 (38%), Positives = 313/569 (55%), Gaps = 47/569 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I +AQ+NPV+GD +GN+ K EA RQ DL++F EL + GYPP DL+ SF+Q Sbjct: 1 MRIGLAQINPVIGDFSGNVKKICSFAMEAYRQKADLVIFPELALCGYPPMDLLEHPSFVQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 A+ TL+ + G+VVG+ +++ + N+ ++ I+ + K LP Y Sbjct: 61 ENLRALRTLQHELPPE-LGVVVGYVEKNKSAAGKPLHNTAALIHQRRILLRQHKTLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEF 170 F E R F + F+ RLGI ICED+W + + + L QGAE Sbjct: 120 DVFDEARYFEPASERIVVPFKRRRLGIAICEDMWGETEPQPGLRYPIDPIQDLLDQGAEI 179 Query: 171 LFSLNASPYYHNKLKKRHEI--VTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + +ASPYY K+ R +I + G+ S V P++YVN VG D LIFDG S D + + Sbjct: 180 ILIPSASPYYMEKVLLRAKIMELIGKGSGV--PLVYVNMVGANDSLIFDGQSLVTDREGR 237 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE---EADYNACVLSLRD 285 L F+ F E F+ D A +P E E A L +RD Sbjct: 238 LVFRAPAFEEGLFLI---------------DTEALPAPLPPLEVSRLEEVRGALHLGIRD 282 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y+ K F +V +GLSGGIDSAL A +AV+ALG E V ++P +++S S+ DA A A Sbjct: 283 YLTKTGFDRVHLGLSGGIDSALVATLAVEALGPERVSAFLMPSQFSSEGSVHDAMALAGN 342 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG + LPI + + F S + Q P I ENIQ+RIRG ILMA SN ++++LTT Sbjct: 343 LGIQAHTLPIRAVFDTFLSTLEPVFQGLPWDITEENIQARIRGTILMAYSNKMRSLVLTT 402 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY T+YGD +G + DL+KTQV+ LA T VIP IL Sbjct: 403 GNKSELAVGYCTIYGDTAGALAVIGDLFKTQVYALARHIRED---------TGVIPEEIL 453 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKR-IVENEESFINNDQEYNDETVRYVEHLLYG 524 K PSAELRP+QTDQ+SLPPY +LD I++ ++ N + + ++ + VR+V ++ Sbjct: 454 TKPPSAELRPNQTDQDSLPPYEVLDQILELYLLRNLTAEDIIARGFDPDLVRHVLLMVVR 513 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISN 553 +E+KRRQ P KI+ ++FG R PI+ Sbjct: 514 AEHKRRQTPPVLKISPRAFGTGRRIPIAR 542 >gi|78779923|ref|YP_398035.1| NAD+ synthetase [Prochlorococcus marinus str. MIT 9312] gi|78713422|gb|ABB50599.1| NAD+ synthetase [Prochlorococcus marinus str. MIT 9312] Length = 565 Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 212/574 (36%), Positives = 317/574 (55%), Gaps = 38/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A D +L EL + GYP DL+ KK+ I Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILYIASQAYSISADFVLTPELSLWGYPANDLLLKKNLIN 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 S + L D + G I VG + + + NS+ +++ G + KI LP Sbjct: 61 NQSQILHQLALDINKKYGNLSITVGIAERINDSFFPNLYNSIALIENGAWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F S ++ + + R+G ICED+W N +I LK Sbjct: 121 TYEVFDEKRYFRSAEKVSILIKKIKNKNWRIGFTICEDLWVNKDIEGRGIHKKNPIIDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG SF D Sbjct: 181 KKKVDLLVNLSASPYTFKKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGNSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE + + W +Q + N S+++ +A VL +R Sbjct: 241 KNGSKIKQLKAFSEDH--SSWEIEQTKPEKNKFETSEISSIF----------DALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +IGLSGGIDSAL +AIA ALG N+ + +P K++S S DA A Sbjct: 289 DYAKKCGFKTALIGLSGGIDSALVSAIATAALGSNNIYCVSMPSKWSSSHSKNDAKDLAI 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L ++ +PI +L+ F + + L E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLKINFNSIPIENLMTSFEESLIKTLTFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN-----SHGITSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L +W + +H + L + Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCNWLDGEDSINHRKSYMLDTNVNI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYV 518 I +I K+PSAEL P Q D +SLPPY LD+I+K I+E ++ +++ + E + + Sbjct: 469 IGENIRTKAPSAELGPDQLDTDSLPPYSTLDNILKGIIEEKKDLKQLEEDGHEKELILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ +E+KR+QAP K++++S G D +PI+ Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRFPIA 562 >gi|22298723|ref|NP_681970.1| NAD synthetase [Thermosynechococcus elongatus BP-1] gi|22294904|dbj|BAC08732.1| glutamine-dependent NAD(+) synthetase [Thermosynechococcus elongatus BP-1] Length = 572 Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 220/582 (37%), Positives = 317/582 (54%), Gaps = 51/582 (8%) Query: 9 IAQLNPVVGDIAGNI-AKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 IAQLN VG + N A A +E ++ +DL++ EL + GYPP+DL+ + F++A Sbjct: 7 IAQLNSTVGSLRTNAEAIASAVQEICSQHPVDLVITPELALCGYPPKDLLLNRHFVEAMQ 66 Query: 68 SAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNYS 121 + L S A G V+ P D +G + N +L G + V K LP Y Sbjct: 67 QELHHLASALPPAVAVLVGTVLPNPDADVKGQKPLYNGAALLREGEVQQVFAKQLLPTYD 126 Query: 122 EFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNS----------NICKHLKKQG 167 F E R F G + + + +++G+ ICED+W N N L +G Sbjct: 127 VFDECRYFAPGSTENLLTLTTATDQLKIGVTICEDLWNNEQFWGQRYYERNPVAELVAEG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 A+ + +L+ASPY K K R ++ H P+IY NQVGG D+L+FDG S + Q Sbjct: 187 ADLIVNLSASPYCVGKPKLRQALIEHTARQYHCPLIYANQVGGNDDLVFDGTSLAVNRQG 246 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRD 285 ++ + K F E W D + M PL + EA + A VL +RD Sbjct: 247 EVVSRAKGFREDYLAVRWQD----------GDLQPTAMIAPLAKGEAAEIWQALVLGVRD 296 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y +K F +V+IGLSGGIDSAL AAIA A+GKE V +++P Y+S S+ DA A Sbjct: 297 YARKCGFRQVVIGLSGGIDSALVAAIATAAVGKEQVLGVLMPSPYSSEHSITDAKDLAAN 356 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG VLPI L+ + +++ PSG+ ENIQ+RIRG +LMA++N +LL+T Sbjct: 357 LGIATQVLPIAPLMQTYSEVLAPLFAGTPSGVAEENIQARIRGTLLMAIANKFGHLLLST 416 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-------LGPLTE 458 NKSE++VGY TLYGDM+GG + D+ KT+V++L W N GP+ Sbjct: 417 GNKSELAVGYCTLYGDMNGGLAAIADVPKTRVYELCHWLNGQAAQGRPIPDLPIAGPV-- 474 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-----YNDE 513 VIPP IL K+PSAEL+P Q DQ+SLPPY ILD I+ R+++ +S DQE Y+ + Sbjct: 475 VIPPHILSKAPSAELKPGQRDQDSLPPYDILDGILARMIDRHQS----DQEIAAAGYDLD 530 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V++V ++ +E+KR+QA G KIT ++FG PI+ ++ Sbjct: 531 LVQHVRRMVQRAEFKRQQAAPGLKITDRAFGSGWRMPIAAQW 572 >gi|294812315|ref|ZP_06770958.1| NH 3 -dependent NAD + synthetase [Streptomyces clavuligerus ATCC 27064] gi|326440851|ref|ZP_08215585.1| NH(3)-dependent NAD(+) synthetase [Streptomyces clavuligerus ATCC 27064] gi|294324914|gb|EFG06557.1| NH 3 -dependent NAD + synthetase [Streptomyces clavuligerus ATCC 27064] Length = 586 Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 216/595 (36%), Positives = 316/595 (53%), Gaps = 52/595 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD++GN R + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLSGNAESIVRRTRHSAEQGAHLVAFPEMALTGYPVEDLALRAS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F+ A +A+ L D G ++VG+ P Q N+ +L G + Sbjct: 61 FVAASRAALLALAVRLADEDLGELPVIVGYLDRSEAAQPTYGQPAGAPRNAAAVLHRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + I + + + ICED+W++ + GA Sbjct: 121 VLSFAKHHLPNYGVFDEFRYFVPGDTLPVIRVHGVDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY NK R E+V + Y+ +GGQDEL+FDG S D + Sbjct: 181 GLLISINASPYEQNKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDASGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIP-------- 268 + + FSE + + D L + + Y P Sbjct: 241 VVARAPQFSEGCVVLDLELPAAAPGIPSGIVDDGLRIDHVVVSADPLPSYDPELTGGYAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR Y KN F V+IGLSGGIDSAL AAIA DA+G +NV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAAIACDAVGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G + + I L + + ++ +G+ EN+QSR+R Sbjct: 361 SKYSSEHSKDDAAELARRTGLHFRTVSIEPLFDAYMGSLAL------TGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTLLMAVSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTTVFRLAHWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFI 504 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ + E+ + Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPGQMDTDSLPDYDVLDRILELYVDRDQGKEAIV 531 Query: 505 NN--DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D+E T+R V+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 532 AAGFDEELVTRTLRLVDT----AEYKRRQYPPGTKISAKGFGKDRRLPITNRWRE 582 >gi|116754039|ref|YP_843157.1| NAD+ synthetase [Methanosaeta thermophila PT] gi|116665490|gb|ABK14517.1| NH(3)-dependent NAD(+) synthetase [Methanosaeta thermophila PT] Length = 567 Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 205/563 (36%), Positives = 309/563 (54%), Gaps = 42/563 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q+N VGD+ GN + R+A E + DL + E+ + GYPP DL+ F++ Sbjct: 29 MRVALLQINTTVGDLEGNASLIRKAVESLD---ADLAVTPEMALVGYPPRDLLLMPGFVK 85 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKINLPNY 120 + L D D ++VG P ++ + NS +L G++ + K LP Y Sbjct: 86 NAWDVLTRLALDLEDSPP-MLVGIPEPNRSETGRPLFNSAALLADGSVKQIFRKTLLPTY 144 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK--------QGAEFLF 172 F E R F + + GI ICEDIW + +I + + +GA+ Sbjct: 145 DVFDEDRYFEPASGPQMLNLKGRTFGISICEDIWNDRDIFRRRRYHRDPLEDLRGADCFI 204 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASP+ K KR +++ +P+IYVNQVGG D+L+FDG S F +L + Sbjct: 205 NMSASPFTAGKHLKREMMLSSIARKYGVPLIYVNQVGGNDDLVFDGRSCAFSPSGELIAR 264 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 F E + + + S S E + A VL RDYV+K F Sbjct: 265 AAAFEEDVLIVD------------IDSCSGSVSRDDFSPESEIWRALVLGTRDYVRKCGF 312 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 +IGLSGG+DS+L AAIA +ALG ENV +++P YTS +S+EDA A+ L + Sbjct: 313 RSAVIGLSGGVDSSLTAAIAAEALGPENVIGVLMPSPYTSRESMEDALELARNLSIQTIT 372 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI +++ + + + + ENIQ+RIRGN+LMALSN ++L+T NKSE++ Sbjct: 373 IPISEIMAAYERTLEPIFRGVEKDVTEENIQARIRGNLLMALSNKFGHIVLSTGNKSELA 432 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY T+YGDMSGGF L D+ KT V+++A W N G VIP S+LEK+PSAE Sbjct: 433 VGYCTIYGDMSGGFAVLSDVPKTMVYRMARWINMRG---------PVIPQSVLEKAPSAE 483 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 LRP Q DQ++LPPY LD+I+ R +E +EE ++ ++ + VRYV ++ +E+KR Sbjct: 484 LRPGQRDQDTLPPYETLDEILHRHIEQRQSEEEIVSAG--FDQKMVRYVLKMVKTAEFKR 541 Query: 530 RQAPVGTKITAKSFGRDRLYPIS 552 +QAP G K+T ++FG PI+ Sbjct: 542 KQAPPGIKVTDRAFGSGWRMPIA 564 >gi|307353508|ref|YP_003894559.1| NAD+ synthetase [Methanoplanus petrolearius DSM 11571] gi|307156741|gb|ADN36121.1| NAD+ synthetase [Methanoplanus petrolearius DSM 11571] Length = 550 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 212/568 (37%), Positives = 308/568 (54%), Gaps = 38/568 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I + QL+PVVGDI GN + DL++F ELF++GYPP DL+ +KSFI Sbjct: 1 MRITLVQLDPVVGDIDGNTERIDETLRLCRSDKPDLVVFPELFLTGYPPRDLLERKSFID 60 Query: 65 ACSSAI-DTLKSDTHDGGAGIVVGFP----RQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 A+ + ++ GI+ G P ++ G+ NS +++ G + + K LP Sbjct: 61 RSYRAVKEIMEVSAGFPDTGILFGAPLRTGKETGRGLYNSALLVKDGELPFTQHKSLLPM 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNIC----------KHLKKQGAE 169 Y F E R F S D LGI ICED W + + L +GA+ Sbjct: 121 YDVFDEVRYFDPAPSTGVAALGDTTLGISICEDAWNDPLLFPGRFYTFDPQADLAAKGAD 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 +++ASP++ K R EI +P + VNQVGG DELIFDG S C D + Sbjct: 181 LFVNISASPFHAGKECVRFEIFRNHAKKHSVPFVVVNQVGGNDELIFDGRSMCLDAKGDP 240 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F E + + Y PL E E+ + A VL LRDYV+K Sbjct: 241 IVVLSSFEEAIVTID------------TNTPGVPGSYRPLGEAESIHRALVLGLRDYVKK 288 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F KVI+ LSGGIDSA+ +AV+ALG E+V +P Y+S S+ D+ A A+ LG + Sbjct: 289 CGFSKVIVSLSGGIDSAVVCCLAVEALGPESVVAATMPGPYSSAGSVGDSKALAENLGIR 348 Query: 350 YDVLPIHDLVNHFFSLMSQFL-QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +P+ + + + + + +E+ + + ENIQ+RIRGN++MALSN ++L+T NK Sbjct: 349 LLEIPVTKIYDTYTGALGDLVDREKEASVTLENIQARIRGNLIMALSNEYGCLVLSTGNK 408 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++VGY TLYGDMSGG + D+ KT V++LA N VIP +I+ K Sbjct: 409 SEMAVGYCTLYGDMSGGLAVISDVPKTTVYKLAREINRE---------WPVIPEAIILKP 459 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEY 527 PSAELRP+QTDQ+ LPPY ILD I++ ++ +S + + ++ ETV +V + +EY Sbjct: 460 PSAELRPNQTDQDLLPPYEILDGILEAYIDEMDSPADIVAKGFDKETVEWVVAQVNRNEY 519 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KRRQA G K+T K+FG R PI+ K+ Sbjct: 520 KRRQAATGLKVTPKAFGSGRRMPIAAKY 547 >gi|306822540|ref|ZP_07455918.1| NAD synthetase [Bifidobacterium dentium ATCC 27679] gi|309801413|ref|ZP_07695540.1| NAD+ synthase [Bifidobacterium dentium JCVIHMP022] gi|304554085|gb|EFM41994.1| NAD synthetase [Bifidobacterium dentium ATCC 27679] gi|308221928|gb|EFO78213.1| NAD+ synthase [Bifidobacterium dentium JCVIHMP022] Length = 565 Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 222/579 (38%), Positives = 320/579 (55%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K A Q +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDANADKVMHYAHLAAAQHAKVVVFPEMILTGYPIEDLALRGT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G +VVG D+E N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELAADGLDDLFVVVGTVGTDRENSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L KQ + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVDGARIGVAICEDIWQDGGPVAELAKQDIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRFDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFTVDADGTLLQRSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + ++D P +EE Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLALFDLDTTAERQSIGVIADK-------PDPDEEV-YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA A +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGNNVYGISMPSMYSSDGSKDDAADLANNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + Q E G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PL---FVAYQKQLDLE---GVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSH-------------GITSGLG--PLTE--V 459 T+YGD GG+ P+KDL KT+V++++ WRN G SG PL + + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNESGSAGVPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + DE TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAMYIEHAHGRADLLADGFDEATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|52840971|ref|YP_094770.1| glutamine dependent NAD+ synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296761|ref|YP_123130.1| hypothetical protein lpp0800 [Legionella pneumophila str. Paris] gi|52628082|gb|AAU26823.1| glutamine dependent NAD+ synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750546|emb|CAH11948.1| hypothetical protein lpp0800 [Legionella pneumophila str. Paris] Length = 536 Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 226/564 (40%), Positives = 305/564 (54%), Gaps = 33/564 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L I +AQ+NP VG I N K + ++ D+I+F EL +SGYP EDL+F+K Sbjct: 1 MNAPLTILMAQINPTVGAIDANTKKIIDVIQN-HQANHDVIIFPELTLSGYPAEDLLFRK 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + ++ T D ++VG P N I G I K LPNY Sbjct: 60 EYHDKIMLNLQDIQDTTKD--CYVIVGHPMIHIGDCYNGFSIFYQGEKIRAYHKQKLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F E R F G DP V ++ +LG ICED+W+ + L G L SLNASP Sbjct: 118 GVFDEARYFTPG-KKDPCVLSIKNHKLGFCICEDLWQKGPV-DDLLDSGISILISLNASP 175 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + + K + R E++ + IIYVNQ+GGQD+L+FDG S D Q + F E Sbjct: 176 FDYRKYQLREELLRSYAKR-GVYIIYVNQIGGQDDLLFDGQSLAMDNQGIIRALAPAFEE 234 Query: 239 QNFMTEWHYDQQLSQWNYMSD--DSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 L N + D +ST Y L +E Y A V RDYV+KNNF V+ Sbjct: 235 S-----------LCTVNIDGNKIDGSSTPY--LDKEALIYKALVCGTRDYVRKNNFPGVL 281 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AIAVDALG E V +++P +YT+ S EDA L + ++PI Sbjct: 282 LGLSGGIDSALTLAIAVDALGAEQVHAVLMPSRYTASISNEDALEQLSNLKVAHSIIPIE 341 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + ++ P ENIQ+RIRG +LMALSN + M+LTTSNKSE +VGY Sbjct: 342 PMFQSMIESLHPVFKDLPPDTTEENIQARIRGMLLMALSNKTGKMVLTTSNKSETAVGYA 401 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF LKD+ KTQV++L +RN ++ VIP ++ + PSAEL+P+ Sbjct: 402 TLYGDMAGGFAVLKDVLKTQVYELVRYRNK---------ISLVIPERVITRPPSAELKPN 452 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLP Y LD II +E S + + + V + L+ +EYKRRQA G Sbjct: 453 QTDQDSLPEYGELDAIIMAYMEQNLSPSEIIAKGFKPQVVNKIIQLIKRNEYKRRQAAPG 512 Query: 536 TKITAKSFGRDRLYPISNKFRDHI 559 KI+ +FG+D YPI+N F I Sbjct: 513 IKISNLAFGKDWRYPITNGFNQCI 536 >gi|119509152|ref|ZP_01628303.1| NAD(+) synthetase [Nodularia spumigena CCY9414] gi|119466318|gb|EAW47204.1| NAD(+) synthetase [Nodularia spumigena CCY9414] Length = 573 Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 223/572 (38%), Positives = 317/572 (55%), Gaps = 41/572 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GD+ GN K A ++A +G L+L EL + GYPP DL+ SF+ Sbjct: 1 MKIAIAQLNPIIGDLPGNAQKILSAAQKAAAKGARLLLTPELSLCGYPPRDLLLNPSFVA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 A + L +D A ++VG Q+ +G+ NS+ +L G + V K L Sbjct: 61 AMGMTLKQLATDLQPNLA-VLVGTVSQNLKAHSTGGKGLFNSIALLADGEVKQVFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQG 167 P Y F E R F G +I +G+ ICED+W + N L Sbjct: 120 PTYDVFDENRYFEPGLQASYFTLDNIDIGVTICEDLWNDEDFLGKRSYPVNPIADLAILR 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K + R ++ P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDVIVNLSASPYSVGKQQYRESMLKHSALRFEQPMIYTNQVGGNDDLIFDGRSFALNRQG 239 Query: 228 QLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 ++ + F+ + ++ D QLS S + +Y EEE + A VL +R Sbjct: 240 EIVCRANGFTTDLIIVQFDEAQRDLQLS--------SVAPLY--QSEEEEIWQALVLGVR 289 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY QK F KV++GLSGGIDSAL AAIA ALGKENV +++P Y+S S+ DA A + Sbjct: 290 DYAQKCRFSKVVLGLSGGIDSALVAAIASVALGKENVFGVLMPSPYSSSHSVSDALALGE 349 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + +L I +L+ F ++ GI ENIQSRIRGN+LMA++N +LL+ Sbjct: 350 NLGIETTILKIGELMAGFDHTLADLFAGTEFGIAEENIQSRIRGNLLMAIANKFGYLLLS 409 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGDM+GG + D+ KT+V+ L W N + E+IP +I Sbjct: 410 TGNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYALCHWLNR---------VREIIPQNI 460 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLY 523 + K PSAEL+P Q DQ+SLP Y ILDDI++ ++ N +S +D V V ++ Sbjct: 461 ITKPPSAELKPGQIDQDSLPDYEILDDILQHLIHNHQSAAQIVAAGHDPVIVNRVIQMVA 520 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +E+KRRQAP G KIT ++FG PI++ + Sbjct: 521 RAEFKRRQAPPGLKITDRAFGTGWRMPIASNW 552 >gi|239940755|ref|ZP_04692692.1| putative NH3-dependent NAD+ synthetase [Streptomyces roseosporus NRRL 15998] gi|239987233|ref|ZP_04707897.1| putative NH3-dependent NAD+ synthetase [Streptomyces roseosporus NRRL 11379] Length = 584 Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 216/595 (36%), Positives = 317/595 (53%), Gaps = 52/595 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLAGNSEAIVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL----------NSVVILDAGNI 108 F++A A+ L + G G +VVG+ + + N+ +L G I Sbjct: 61 FVEASRQALRALAARLDTEGFGELPVVVGYLDRSEHAAARYGQPAGSPRNAAAVLHRGGI 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G S + I + + ICED+W++ + GA Sbjct: 121 ALNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + + Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDKEGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIP-------- 268 + + FSE + + + D L + + D Y P Sbjct: 241 VIARAPQFSEGSVILDLELPAAAAVAPSGVVDDGLRIDHVVISDEPVAAYEPELAGGYAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L++EE Y+A V+ LR Y KN F V+IGLSGGIDSA+CAAIA DALG +NV + +P Sbjct: 301 RLEDEEEIYSALVVGLRAYAAKNGFSSVLIGLSGGIDSAICAAIACDALGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G + +PI + + + + + +G+ EN+Q+R+R Sbjct: 361 SKYSSGHSKDDAAELARRTGLNFRTVPIAPMFDAYMESL------QLTGLAEENLQARLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA WRN Sbjct: 415 GTTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF---- 503 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYEVLDAILELYVDRDQGMDAIV 531 Query: 504 -INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D E +T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDAELVAKTLRMVDT----AEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 582 >gi|171742677|ref|ZP_02918484.1| hypothetical protein BIFDEN_01791 [Bifidobacterium dentium ATCC 27678] gi|171278291|gb|EDT45952.1| hypothetical protein BIFDEN_01791 [Bifidobacterium dentium ATCC 27678] Length = 565 Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 222/579 (38%), Positives = 320/579 (55%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K A Q +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDANADKVMHYAHLAAAQHAKVVVFPEMTLTGYPIEDLALRGT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G +VVG D+E N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELAADGLDDLFVVVGTVGTDRENSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L KQ + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVDGARIGVAICEDIWQDGGPVAELAKQDIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRFDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFTVDADGTLLQRSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + ++D P +EE Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLALFDLDTTAERQSVGVIADK-------PDPDEEV-YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA A +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGNNVYGISMPSMYSSDGSKDDAADLANNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + Q E G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PL---FVAYQKQLDLE---GVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSH-------------GITSGLG--PLTE--V 459 T+YGD GG+ P+KDL KT+V++++ WRN G SG PL + + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNESGSAGVPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + DE TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAMYIEHAHGRADLLADGFDEATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|284051648|ref|ZP_06381858.1| NAD synthetase [Arthrospira platensis str. Paraca] gi|291566403|dbj|BAI88675.1| probable glutamine-dependent NAD(+) synthetase [Arthrospira platensis NIES-39] Length = 565 Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 214/573 (37%), Positives = 310/573 (54%), Gaps = 38/573 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP VGD+ GN A + A + L+L EL + GYPP DL+ + SFI Sbjct: 1 MKIAIAQINPTVGDLTGNAQLILEAAQWAINEDASLLLTPELALIGYPPRDLLIRPSFIN 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINL 117 A ++ L A ++VG + + N+ +L G I + K L Sbjct: 61 AAQQQLEKLAQQLPVELA-VLVGTVSPNHTASQLGGKPLFNTAALLMGGEIKQMFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRD------IRLGILICEDIWKNSNI-------C---K 161 P Y F E R F ++D + +++G+ ICED+W + C K Sbjct: 120 PTYDVFDEHRYFEPAPTSDFFTLKKPRSEEIVKIGVSICEDLWNDEKFWAQRNYSCDPMK 179 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + +++ +L+ SPY K K R +++ +PIIY NQVG D+LIFDG S Sbjct: 180 DLSDRHVDWVVNLSGSPYRAGKQKLRKAMLSHSARRYGIPIIYNNQVGANDDLIFDGCSL 239 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL 281 +G + + F + EW ++ ++ D + L ++ + A VL Sbjct: 240 VINGSGDVVKSLAAFQTDLQIIEWDFNTS----TFVGDSANIEDTQLLDSDDEIWQALVL 295 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 ++DY +K F KV+IGLSGGIDS+L AAIA +ALG + V +++P Y+S S+EDA Sbjct: 296 GVKDYTRKCGFSKVVIGLSGGIDSSLVAAIATEALGSQQVLGVLMPSPYSSEHSIEDALD 355 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 AK LG LPI ++N F S + GI EN+QSRIRG +LMA+SN + Sbjct: 356 LAKNLGISTQTLPIESVMNAFDSTLYNLFAGTQFGIAEENMQSRIRGTLLMAISNKFGHL 415 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN-SHGITSGLGPLTEVI 460 LL+T NKSEI+VGY TLYGDM+GG + D+ KT+V+ + W N S G E+I Sbjct: 416 LLSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTRVYSICKWLNESRG--------REII 467 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVE 519 P ++L K SAEL+P Q D +SLPPY ILDDI+ R++E ES + +D +TV + Sbjct: 468 PNNVLIKPASAELKPGQFDSDSLPPYHILDDILYRLIERHESVPTIIEAGHDCQTVERIV 527 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ G+E+KRRQAP G KI+ ++FG PI+ Sbjct: 528 KLVMGAEFKRRQAPPGLKISDRAFGTGWRMPIA 560 >gi|33241048|ref|NP_875990.1| NAD synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238577|gb|AAQ00643.1| NAD synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 564 Score = 356 bits (913), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 215/577 (37%), Positives = 328/577 (56%), Gaps = 42/577 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++++AQLNP++GD++GN K A ++A + +L++ EL I GYPP DL+F F++ Sbjct: 1 MRLSLAQLNPLIGDLSGNSKKIIAACKDAYKNNANLLITPELSILGYPPRDLLFNPLFLE 60 Query: 65 ACSSAIDTLKSDTHDGGA--GIVVGF--PRQDQE--GVLNSVVILDAGNIIAVRDKINLP 118 +D + + + ++VG P QD + + NS+ +L + + K LP Sbjct: 61 HQWDILDEIVTYIAEKTPQLTLLVGIAEPAQDLQVPNLFNSIALLKSSGWEVIARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNSNICKH----------LK 164 Y F EKR F + + I+ R RLG+ ICED+W I H L Sbjct: 121 TYDVFDEKRYFRAAQKSGVILLTENERTWRLGLTICEDLWVEEGIQGHRIEGPDPIADLT 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASP+ H K R + + ++ P+IY+NQVGG DELIFDG+SF D Sbjct: 181 SKKIDLLLNLSASPFTHGKGLLRQRLASKAAKRLNCPVIYLNQVGGNDELIFDGSSFITD 240 Query: 225 --GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 G++ L+ + + + W+ S+ S S+ + +++E A VL Sbjct: 241 QKGKKTLSLPL-------------CKESIVTWDATSNSSISSPSLK-EDQEILLQALVLG 286 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++DYV K F V++GLSGGIDSAL A IA ALG E V I++P ++S S+ DA Sbjct: 287 VKDYVGKCGFKSVLLGLSGGIDSALVAIIACAALGAEKVSGILMPSPWSSEGSIIDANNL 346 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK LG K +PI L+ ++ + L + P G+ AEN+Q+RIRG +LMA++N K +L Sbjct: 347 AKRLGIKTSTIPIASLMENYDITLKTTLGKLPQGLTAENLQARIRGTLLMAIANEQKHLL 406 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW---RNSHGITSGLG-PLT- 457 L+T NKSE++VGY TLYGDM+GG + DLYKT +F L W N++ S LG P T Sbjct: 407 LSTGNKSELAVGYCTLYGDMNGGLAVIGDLYKTNIFDLCHWLDSNNAYQCRSDLGLPKTG 466 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVR 516 +++ +IL K PSAEL P+Q D +SLP Y +LD I+K ++E+ ++ +EY V Sbjct: 467 DLVGSAILNKPPSAELSPNQLDSDSLPDYEVLDKILKALIEDRSNYKTLASKEYPSALVT 526 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 V+ LL +E+KRRQAP K++ ++FG PI++ Sbjct: 527 KVKKLLKNAEFKRRQAPPTLKVSEQAFGSGWRIPIAS 563 >gi|283456252|ref|YP_003360816.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium dentium Bd1] gi|283102886|gb|ADB09992.1| nadE Glutamine-dependent NAD(+) synthetase [Bifidobacterium dentium Bd1] Length = 565 Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 221/579 (38%), Positives = 320/579 (55%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K A Q +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDANADKVMHYAHLAAAQHAKVVVFPEMTLTGYPIEDLALRGT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G +VVG D+E N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELAADGLDDLFVVVGTVGTDRENSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L KQ + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVDGARIGVAICEDIWQDGGPVAELAKQDIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRFDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFTVDADGTLLQRSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + ++D P +EE Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLALFDLDTTAERQSVGVIADK-------PDPDEEV-YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA A +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGNNVYGISMPSMYSSDGSKDDAADLANNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + Q E G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PL---FVAYQKQLDLE---GVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSH-------------GITSGLG--PLTE--V 459 T+YGD GG+ P+KDL KT+V++++ WRN G SG PL + + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNESGSAGVPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + + DE T+ V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAMYIEHAHGRADLLADGFDEATIDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|291444194|ref|ZP_06583584.1| NH(3)-dependent NAD(+) synthetase [Streptomyces roseosporus NRRL 15998] gi|291347141|gb|EFE74045.1| NH(3)-dependent NAD(+) synthetase [Streptomyces roseosporus NRRL 15998] Length = 601 Score = 355 bits (912), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 216/595 (36%), Positives = 317/595 (53%), Gaps = 52/595 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 18 VPQLRLALNQIDSTVGDLAGNSEAIVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 77 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL----------NSVVILDAGNI 108 F++A A+ L + G G +VVG+ + + N+ +L G I Sbjct: 78 FVEASRQALRALAARLDTEGFGELPVVVGYLDRSEHAAARYGQPAGSPRNAAAVLHRGGI 137 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G S + I + + ICED+W++ + GA Sbjct: 138 ALNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQDGGRVPAARSAGA 197 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + + Sbjct: 198 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDKEGE 257 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIP-------- 268 + + FSE + + + D L + + D Y P Sbjct: 258 VIARAPQFSEGSVILDLELPAAAAVAPSGVVDDGLRIDHVVISDEPVAAYEPELAGGYAE 317 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L++EE Y+A V+ LR Y KN F V+IGLSGGIDSA+CAAIA DALG +NV + +P Sbjct: 318 RLEDEEEIYSALVVGLRAYAAKNGFSSVLIGLSGGIDSAICAAIACDALGAQNVYGVSMP 377 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G + +PI + + + + + +G+ EN+Q+R+R Sbjct: 378 SKYSSGHSKDDAAELARRTGLNFRTVPIAPMFDAYMESL------QLTGLAEENLQARLR 431 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA WRN Sbjct: 432 GTTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSSVFRLAKWRNRA 491 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF---- 503 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 492 AEERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYEVLDAILELYVDRDQGMDAIV 548 Query: 504 -INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D E +T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 549 AAGFDAELVAKTLRMVDT----AEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 599 >gi|284929537|ref|YP_003422059.1| NH(3)-dependent NAD(+) synthetase [cyanobacterium UCYN-A] gi|284809981|gb|ADB95678.1| NH(3)-dependent NAD(+) synthetase [cyanobacterium UCYN-A] Length = 561 Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 219/580 (37%), Positives = 319/580 (55%), Gaps = 51/580 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI IAQLNP+VG++ N ++ A ++ ++L+L EL + GYPP+DLV +FIQ Sbjct: 1 MKILIAQLNPIVGNLKYNADSIYKSAILAKQKNVELLLTPELSLCGYPPKDLVLNTNFIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 + L A ++VG ++ ++ + NS+V+L I + K L Sbjct: 61 NSWLELQKLAKKIPPKLA-VLVGLVTKNYYSEIKGEKPLFNSIVLLQNNAIKQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISG-------YSNDPIVFRDIRLGILICEDIWK----------NSNIC 160 PNY F EK F SG S+ R+G+ ICED+W +N Sbjct: 120 PNYDVFDEKHYFESGKVSSFFELSSSSKRNESSRIGVTICEDLWNEESFWSKRNYKNNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L + + + +L+ASPY NK K R I+ PIIYVNQ+GG D+LIFDG S Sbjct: 180 RDLVRYKVDLIVNLSASPYVINKQKTRESILKHSAKLYQTPIIYVNQIGGNDDLIFDGHS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 + + ++ + K F + + E+H + D + S + EE ++A V Sbjct: 240 CAVNKKGEVVLRTKGFQIRTEIIEYHQS--------IKDLTLSLNKNSITAEEEVWSALV 291 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DYV K F KV++GLSGGIDS+L A+IAV+ALG +NV I++P Y+S S+ DA Sbjct: 292 LGLKDYVIKCGFSKVVLGLSGGIDSSLVASIAVEALGAKNVLGILMPSPYSSQHSITDAK 351 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A LG ++PI +++ + + + GI EN+QSRIRGNILMA++N Sbjct: 352 HLADNLGINSYMIPIDNIMLAYTYSLDVLFKTVDIGIAEENLQSRIRGNILMAIANKFGH 411 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSEIS+GY TLYGDM+GG + D+ KTQVF L W N E+I Sbjct: 412 LLLSTGNKSEISIGYCTLYGDMNGGIGVIADVSKTQVFSLCKWLNKS---------QEII 462 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRY--- 517 P +IL K PSAEL+P+Q DQ+SLP Y ILDD++ R + + +S QE + Y Sbjct: 463 PINILLKPPSAELKPNQVDQDSLPSYNILDDLLNRFINHHQSI----QELHKVGFEYDLL 518 Query: 518 --VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V L+ +E+KR+QAP G KIT ++FG PI+++ Sbjct: 519 YRVAKLIIRAEFKRKQAPPGLKITNRAFGTGWRMPIASQL 558 >gi|116071296|ref|ZP_01468565.1| NAD+ synthase [Synechococcus sp. BL107] gi|116066701|gb|EAU72458.1| NAD+ synthase [Synechococcus sp. BL107] Length = 558 Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 210/571 (36%), Positives = 315/571 (55%), Gaps = 38/571 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD+ GN + A EA R G D++L EL + GYPP DL+ + I Sbjct: 1 MRLALAQINPLVGDLQGNAERILVAASEAQRDGADVLLTPELSLWGYPPRDLLLQPDRIA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG--FPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNY 120 A + + + S D ++VG P D G+ NS+ ++D AV K LP+Y Sbjct: 61 AQAELLQGM-SQHLDSDLIVLVGVALPTDDDRAPGLTNSIALVDRRGWRAVAHKQLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNI----------CKHLKKQGAE 169 F E+R F G + + + RLG+ ICED+W + N+ + L + + Sbjct: 120 DVFDERRYFRPGTGPNLLQLPNGQRLGLTICEDLWVDDNLQRERLAGPDPIEQLIPEQPD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L ASP+ +K R ++ ++ P++Y+NQVGG DEL+FDG SF Sbjct: 180 VVINLAASPFDADKPLLRQKLAATAARRLNCPVVYLNQVGGNDELVFDGGSFVMSASGDP 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 ++ +Q ++ W + + + ++ DD ++ A VL ++DY K Sbjct: 240 LLELPCCCDQ--VSLWDSEAEPANRDHSPDDPLDRLF----------RALVLGVQDYACK 287 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F K ++GLSGGIDS L A IA ALG ++V T+++P ++S S++DA A AK LG K Sbjct: 288 CGFQKALLGLSGGIDSGLVAVIATAALGADHVSTLLMPSPWSSAGSIDDAVALAKRLGLK 347 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 LPI L++ F + ++ L +PSG+ AEN+QSRIRG +LMA++N +LLTT NKS Sbjct: 348 TTTLPIRPLMDGFDTTLNPALGADPSGVTAENLQSRIRGTLLMAVANQEGQLLLTTGNKS 407 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL-----TEVIPPSI 464 E++VGY TLYGDM+GG + DLYKT VF L W +S G E++ +I Sbjct: 408 ELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWLDSPASRHCRGDYHLPEHGELVGDAI 467 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHL 521 K PSAELRP Q D +SLP Y LD ++K +++ E I +N E V VE L Sbjct: 468 RRKPPSAELRPDQKDSDSLPDYSALDALLKDLIQERRHGEDLIA--AGHNPELVSRVEQL 525 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L +E+KRRQA K++ ++FG PI+ Sbjct: 526 LKRAEFKRRQAAPLLKVSPQAFGSGWRLPIA 556 >gi|123966858|ref|YP_001011939.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9515] gi|123201224|gb|ABM72832.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9515] Length = 565 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 207/574 (36%), Positives = 325/574 (56%), Gaps = 38/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQLNP+VGD+ GN K +A+ D++L EL + GYP +DL+ KK+ I+ Sbjct: 1 MKFFLAQLNPIVGDLDGNAKKILYVANKAHLNSADMVLTPELSLWGYPAKDLLLKKNLIE 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 + +D L + G I VG + + + NSVV++++G+ + KI LP Sbjct: 61 RQYTILDQLSKSINKKYGDLSITVGIAEKIDDSFFPNLYNSVVLIESGHWKTIARKIILP 120 Query: 119 NYSEFHEKRTFIS----GYSNDPIVFRDIRLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F S + I + ++G+ ICED+W N NI LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVISKKIKDKTYKIGLTICEDLWVNENIDGRGIHEKNPISQLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASPY K K R++I + ++++P++Y+NQVG D+LIFDG SF + Sbjct: 181 SKKIDLLLNLSASPYTFKKFKLRNKISSFAAQYLNVPLVYINQVGANDDLIFDGNSFIIN 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE F+ W+ ++ L N +++ +S + + ++A VL ++ Sbjct: 241 KNGSKIKQLKSFSEDTFI--WNINENL---NLVTEKKSSDI-------SSVFDALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +IGLSGGIDSAL + IA ALG EN+ + +P K++S S DA + Sbjct: 289 DYAKKCGFRSALIGLSGGIDSALVSVIATAALGHENIFCVSMPSKWSSNHSKIDAKDLVE 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + + I ++++ F + + G+ +NIQSRIRG +LMAL+N K +LL Sbjct: 349 RLNVNLNTISIENIMSSFEDSFLESFNFKVEGVTNQNIQSRIRGTLLMALANQEKHLLLA 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L +W +S L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCNWLDSEDSLERRKAYKLDTKVKI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYV 518 I I +K+PSAEL P+Q D +SLPPY +LD I+K I+E ++ +Q+ + + + + Sbjct: 469 IGDQIRKKAPSAELGPNQLDTDSLPPYSLLDKILKGIIEEKKDLQLLEQDGHTKKQILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ +E+KR+QAP K++++S G D PI+ Sbjct: 529 ITLIKKAEFKRKQAPPILKLSSQSLGSDWRVPIA 562 >gi|78184072|ref|YP_376507.1| NAD+ synthase [Synechococcus sp. CC9902] gi|78168366|gb|ABB25463.1| NAD+ synthase [Synechococcus sp. CC9902] Length = 558 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 209/571 (36%), Positives = 314/571 (54%), Gaps = 38/571 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD+ GN + A EA R G D++L EL + GYPP DL+ + + I Sbjct: 1 MRLALAQINPLVGDLQGNAERILVAASEAQRDGADVLLTPELSLWGYPPRDLLLQPARIA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG--FPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNY 120 A + + + S D ++VG P D G+ NS+ ++D AV K LP+Y Sbjct: 61 AQAELLQWM-SQQLDSDLIVLVGVALPTDDDRAPGLTNSIALVDRRGWRAVAHKQLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNI----------CKHLKKQGAE 169 F E+R F G + + + RLG+ ICED+W + N+ + L + + Sbjct: 120 DVFDERRYFRPGTGPNLLQLPNGQRLGLTICEDLWVDDNLQRERLAGPDPIEQLISEQPD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L ASP+ +K R ++ ++ P++Y+NQVGG DEL+FDG SF Sbjct: 180 VVINLAASPFDADKPLLRQKLAATAARRLNCPVVYLNQVGGNDELVFDGGSFVMSASGDP 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 ++ +Q ++ W + + + + DD ++ A VL +RDY +K Sbjct: 240 LLELPCCCDQ--VSLWDSEAEPANRDQGPDDPLDRLF----------RALVLGVRDYARK 287 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F K ++GLSGGIDS L A IA ALG + V T+++P ++S S++DA A AK LG K Sbjct: 288 CGFQKALLGLSGGIDSGLVAVIATAALGADQVSTLLMPSPWSSAGSIDDAIALAKRLGLK 347 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 LPI L++ F + ++ L +P+G+ AEN+QSRIRG +LMA++N +LLTT NKS Sbjct: 348 TTTLPIRPLMDGFDTTLNPALGADPNGVTAENLQSRIRGTLLMAVANQEGQLLLTTGNKS 407 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL-----TEVIPPSI 464 E++VGY TLYGDM+GG + DLYKT VF L W +S G E++ +I Sbjct: 408 ELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWLDSPASRHCRGDYHLPEHGELVGDAI 467 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHL 521 K PSAELRP Q D +SLP Y LD ++K +++ E I +N V VE L Sbjct: 468 RRKPPSAELRPDQKDSDSLPDYSALDALLKDLIQERRHGEDLIA--AGHNPALVSRVEQL 525 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L +E+KRRQA K++ ++FG PI+ Sbjct: 526 LKRAEFKRRQAAPLLKVSPQAFGSGWRLPIA 556 >gi|172037669|ref|YP_001804170.1| NAD synthetase [Cyanothece sp. ATCC 51142] gi|171699123|gb|ACB52104.1| NH(3)-dependent NAD(+) synthetase [Cyanothece sp. ATCC 51142] Length = 562 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 212/577 (36%), Positives = 322/577 (55%), Gaps = 42/577 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GDI N + + A + +L+L EL + GYPP+DL+F F++ Sbjct: 1 MKIAIAQLNPIIGDIENNAQHIYKVAQIAVERKAELLLTPELSLCGYPPKDLLFNTGFVE 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLP 118 ++ L A G V P +EG + NS+V+++ I + K LP Sbjct: 61 KLQIELEKLAKQLPKKLAVLVGTVTENPHAYREGEKPLFNSIVLIENQAIKQIFHKRLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF-------RDIRLGILICEDIWKN----------SNICK 161 Y F E R F G ++ + I++G+ +CED+W + +N + Sbjct: 121 TYDVFDEDRYFEPGKESNFFQLSSHDSNSKPIKIGVTVCEDLWNDEEFWGKRNYETNPIQ 180 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L G + + +L+ASPY K K R ++ +PIIY NQVGG D+LIFDG SF Sbjct: 181 DLVNNGVDLVVNLSASPYSIGKQKVRESMLKYTAQRHQVPIIYTNQVGGNDDLIFDGNSF 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACV 280 + ++ + K F E + + +Y++D ++ EEA+ ++A V Sbjct: 241 AVNKNGEITLRAKGFQTAIETIECDDNNHDFKISYIADS--------IETEEAEIWSALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DY K F K ++GLSGGIDS+L AAIA +ALGKENV I++P Y+S S+ DA Sbjct: 293 LGLKDYAHKCGFSKAVLGLSGGIDSSLVAAIAAEALGKENVLGILMPSPYSSSHSISDAE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A LG K LPI D++ + S++ + G+ EN+QSRIRGN+LMA++N Sbjct: 353 ALVNNLGIKRYTLPIKDVMKAYDSILEPLFKGTEFGVAEENLQSRIRGNLLMAIANKFGH 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H E+I Sbjct: 413 LLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFHLCKWLNRH---------QEII 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVE 519 P ++L K PSAEL+P Q DQ+SLP Y ILD I+ R++ +S + ++ + + V Sbjct: 464 PRNVLIKPPSAELKPDQVDQDSLPSYDILDGILDRLIHRHQSIKEIEAAGFDYDIICKVV 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KR+QAP G K++ ++FG PI+++++ Sbjct: 524 KLVTRAEFKRKQAPPGLKVSDRAFGTGWRMPIASRWK 560 >gi|86741832|ref|YP_482232.1| NH(3)-dependent NAD(+) synthetase [Frankia sp. CcI3] gi|86568694|gb|ABD12503.1| NH(3)-dependent NAD(+) synthetase [Frankia sp. CcI3] Length = 606 Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 214/615 (34%), Positives = 316/615 (51%), Gaps = 70/615 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ++ VGD+AGN + A G LI F EL ++GYPPEDLV ++S Sbjct: 1 MAQLRIALAQVDTTVGDLAGNADLVSTWTKRAVADGAHLIAFGELTLTGYPPEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-------------PRQDQEGVLNSVVILDA 105 F+ A A+ L + G G +VVG+ P + + N+ +L Sbjct: 61 FVAASQRALVALARRLAEEGCGEIAVVVGYLDASAQPAPNVGRPAGEPQ---NAAAVLWG 117 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 G ++A K +LPNY F E R F+ G + + I +G+ ICED+W+ ++ Sbjct: 118 GEVVARYAKHHLPNYGVFDEFRYFVPGMAFPVLRLHGIDVGLTICEDLWQQGGPITVARR 177 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 G + +N SPY K +R + + + YVN VGGQDEL+FDG S D Sbjct: 178 SGVGLVLCINGSPYEQGKSFQRDALCAERAREAAAALAYVNLVGGQDELVFDGDSLVVDA 237 Query: 226 QQQLAFQMKHFSEQNFMTEWHY---------------DQQLSQWNYMSDDSASTMYIPLQ 270 +L + FSE +T+ D + + +TM + Sbjct: 238 AGELVARAPVFSEALLITDLDLPAAGSGPARAVSGAVDAGAVDAGAVDAEDGTTMTVTRT 297 Query: 271 EEEAD----------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 A+ Y A V + RDY++KN F V +GLSGGIDSAL Sbjct: 298 VLAAEPLAPFAPLPPVVADRPEPAGELYTALVTATRDYIRKNGFSSVALGLSGGIDSALV 357 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A IAVDA+G + V T+ LP Y+S S+ DAA A+ G ++ V+PI + F + + Sbjct: 358 ATIAVDAIGADAVHTVALPSGYSSGHSVTDAAELARRQGTRHAVVPIEPIAAAFRAAAAA 417 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 EN+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GG+ P Sbjct: 418 LGGLHGL--ADENLQARVRGTLLMALSNQHGHLILTTGNKSELATGFSTLYGDSAGGYAP 475 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPI 488 +KD+ KT+V+ LA WRN+ G P IP I+ K+PSAEL P Q D + LP Y I Sbjct: 476 IKDVSKTRVWGLARWRNAAAEKRGEVP---PIPEEIIVKAPSAELAPGQLDSDRLPDYGI 532 Query: 489 LDDIIKRIVENEES-----FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 LD ++ V ++ +D D+ +R V+ +EYKRRQ P G K+T+K+F Sbjct: 533 LDPVLDDYVSHDRGRAELIAAGHDPAVVDKVIRLVDL----AEYKRRQNPPGPKVTSKAF 588 Query: 544 GRDRLYPISNKFRDH 558 GRDR PI++++R++ Sbjct: 589 GRDRRLPITSRWREN 603 >gi|242280331|ref|YP_002992460.1| NAD+ synthetase [Desulfovibrio salexigens DSM 2638] gi|242123225|gb|ACS80921.1| NAD+ synthetase [Desulfovibrio salexigens DSM 2638] Length = 549 Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 215/567 (37%), Positives = 317/567 (55%), Gaps = 36/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ QLN VGD+ GN+ +A ++G L L +EL ++GYPP DL+ F+ Sbjct: 1 MKIALLQLNLTVGDLEGNVELILDGVRKAAKRGARLCLTSELALTGYPPRDLLLNADFVC 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV----LNSVVILDAGNIIAVRDKINLPNY 120 C A+ + +G A ++ G + EG+ N+ +++ G + V K LP Y Sbjct: 61 RCREAVSEISRRMPEGMA-LLAGGVDLNHEGIGNPLRNAAWLIEHGAVPKVFYKWLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEF 170 F E+R F + + F +++G+ ICED+W + SN + + Sbjct: 120 DVFDEQRYFEPAENINFFEFDGLKIGVTICEDVWNDRENNNGRRYGSNPIPQIMDMNPDV 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +L+ASP+ K + R +++ S +P+ Y NQVGG D+L+FDG S F+ L Sbjct: 180 LVNLSASPFSIGKQRTREKLLGDIASKYKVPVFYANQVGGNDDLVFDGRSCAFNTDGDLV 239 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + F E + E S DD EE + A VL LRDY+ K Sbjct: 240 ARGHGFVEDVVIVE----SDCSAGRIEEDD--------FCEEAEAWQAMVLGLRDYLGKT 287 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F KV++GLSGGIDSAL AA+A +ALG ENV +++P Y+S S++D+ K +G Sbjct: 288 GFSKVVLGLSGGIDSALTAAVAAEALGAENVTGVLMPSPYSSKGSVDDSLDLVKNIGINC 347 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +PI L+ F ++ + P+ + ENIQSRIRGN++MA+SN A+L+TT NKSE Sbjct: 348 TTIPIDKLMGQFEEALAPTFEGLPANVTEENIQSRIRGNLVMAISNKMGALLVTTGNKSE 407 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY T+YGDM+GG + DLYKT VF++ W N G E+IP +I+EK PS Sbjct: 408 LAVGYCTIYGDMAGGLAVISDLYKTLVFRVCRWLNEQG-------RGEIIPVAIIEKPPS 460 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENE--ESFINNDQEYNDETVRYVEHLLYGSEYK 528 AELRP Q D++SLPPY +LD II+ VE ES I + ++ ETV++V L+ SE+K Sbjct: 461 AELRPGQKDEDSLPPYDVLDRIIELRVEGHKAESEIIAETGFDVETVQHVLRLIRISEFK 520 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R+QA G KIT+++FG PI+ +F Sbjct: 521 RKQAAPGLKITSRAFGTGWRMPIACRF 547 >gi|159904106|ref|YP_001551450.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9211] gi|159889282|gb|ABX09496.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9211] Length = 576 Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 207/584 (35%), Positives = 323/584 (55%), Gaps = 37/584 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI- 63 +++A+ Q+N +VGD+ GN K +E ++ +DL++ EL + GYPP DL+ + + Sbjct: 1 MRLALGQINSLVGDLKGNSHKILTVCKEVAQKEVDLLITPELSLWGYPPRDLLLDPALVY 60 Query: 64 ---QACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLP 118 + + +++ D + + V P D + + N++ ++ + K LP Sbjct: 61 YQWTILNKMVGSIEKDCPNLSVLVGVAEPTPDCQIPKLFNAIALVQRKGWRIIARKQLLP 120 Query: 119 NYSEFHEKRTFI----SGYSNDPIVFRDIRLGILICEDIW----------KNSNICKHLK 164 Y F EKR F SG + I + R+G+ ICED+W + ++ L+ Sbjct: 121 TYDVFDEKRYFRPAENSGILDIEINSKPWRIGLTICEDLWVEEKLQGQRVEGADPLSDLR 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++G + L +++ASP+ K R E+ + P+IYVNQVGG DEL+FDGASF D Sbjct: 181 EKGIDLLINMSASPFSLKKKSLRKELAVKASQRLKCPVIYVNQVGGNDELVFDGASFAID 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 + +L+ ++ + E H D Y S + +EEE N VL ++ Sbjct: 241 QKGELSLELPRYKE-------HIDIWEPGRTYKIPPSLTKE----REEEMLMNTLVLGVK 289 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K +F V++GLSGGIDSAL A IA ALG NV +++P ++S SL DA AK Sbjct: 290 DYAEKCDFKSVLLGLSGGIDSALVAVIATAALGAANVHGVLMPSPWSSNNSLTDALNLAK 349 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + + +PI L+N + + + + E P + AEN+Q+RIRG +LMA++N + +LL+ Sbjct: 350 RLGIQTNTIPISSLMNAYDTELKEVFGESPKDVTAENLQARIRGTLLMAIANQQQHLLLS 409 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF L W +S + GL E+ Sbjct: 410 TGNKSELAVGYCTLYGDMNGGVSVIGDLYKTSVFNLCDWLDSKAADNCKESLGLPKQKEL 469 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYV 518 I SI K PSAELRP Q D +SLP Y +LD I+K ++E+ + I + ++ E V+ + Sbjct: 470 IGVSIRTKPPSAELRPGQLDSDSLPEYKVLDPILKALIEDRINPIELIKSGFDSEVVQRI 529 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 + LL SE+KRRQAP K++ ++FG PI+ + + E Sbjct: 530 QLLLKQSEFKRRQAPPVFKVSNQAFGSGWRVPIAASYSRLLKNE 573 >gi|307298266|ref|ZP_07578070.1| NAD+ synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916352|gb|EFN46735.1| NAD+ synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 569 Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 219/581 (37%), Positives = 321/581 (55%), Gaps = 44/581 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+AQ+N VGDI GN K A ++A +++LF EL I+GYPPEDL+ F++ Sbjct: 3 VRTALAQINTTVGDINGNKNKIIEAIDQATASDSEILLFPELTITGYPPEDLLLNTGFLR 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ + + T IV+GF E + N+ ++ +G I AV K++LPNYS F Sbjct: 63 ENLAALKEIANYTEGSKTMIVLGFVDFSNE-IYNAAAVIHSGEIRAVYRKMSLPNYSVFD 121 Query: 125 EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E+R F G + P++ R + +GI ICED+W S GA + +L+ASP+ Sbjct: 122 ERRYFSPG--SHPLLARYGEANIGINICEDLWVPSGPINEQAIGGANLILNLSASPFSGM 179 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF---DGQQQLAFQMKHFSEQ 239 K K R ++ + I+YVN VGGQD+L+FDG S C DG+ L K F E Sbjct: 180 KSKTRSALLLTRAMEYSSIIVYVNLVGGQDDLVFDGRS-CVAMPDGRLLLG---KAFEED 235 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE--------------------EEADYNAC 279 + + D + +M + L+E E Y+ Sbjct: 236 MILLDIDTDVSTRYNLFEGKRKDYSMQVSLEEVSITPSHRQSPSVNPDSSCQELCKYDEL 295 Query: 280 VLSL----RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 + +L RDYV+KN F KV++GLSGG+DS+L AA+AV A+G +NV+ +M+P + TS +S Sbjct: 296 IAALEIGIRDYVKKNGFKKVVLGLSGGMDSSLVAALAVRAIGNDNVKGVMMPSRITSGES 355 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 DA L + +PI D++ S + I EN+Q+RIRG ILMALS Sbjct: 356 KRDALELVNNLQIEGLEIPIDDIMCTTLSTLEPVFTGTSEDITEENLQARIRGMILMALS 415 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N ++L T NKSE++ GY TLYGDM+GGF LKDLYKTQV+++A N Sbjct: 416 NKFGWLVLITGNKSEMATGYATLYGDMAGGFAVLKDLYKTQVYRIAERINELA------- 468 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDET 514 ++IP ++ K+PSAELR Q DQ+SLPPY ILD+I++ +E +S E + +T Sbjct: 469 KRDMIPRNVFSKAPSAELREGQKDQDSLPPYEILDEILRLHIEEGQSAEEIVLEGFERDT 528 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V + LL SEYKR+Q P G K++ ++FG+D PI+N + Sbjct: 529 VEHSLKLLRRSEYKRKQCPPGIKVSKRAFGKDWRMPITNHY 569 >gi|222528265|ref|YP_002572147.1| NAD+ synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455112|gb|ACM59374.1| NAD+ synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 540 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 210/567 (37%), Positives = 318/567 (56%), Gaps = 44/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K R + + + +++F EL I GYPP+DL+F+K FI+ Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIRIIK--SHRDAKILIFPELAICGYPPKDLLFQKDFIE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + + D + ++VG P + + NS +I+ G I + K LP+Y Sbjct: 59 AVDKAIEEIAKEVED--SFVIVGSPTKSHHVSKLFNSAIIIHQGKIEKMIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R FI + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFIPSPAREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELSQKGAKVFIN 176 Query: 174 LNASPYYHNKLK-KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ +R +++ + +P+IYVNQVGG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVLSSDGRLVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E ++ + D S A VL +RDY +K Sbjct: 237 AKEFEEDILEIELEKIDKMPEVEIHEDISWIK------------KALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALG ENV + +P +Y+S SL+DA A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAAEALGPENVLGVAMPSRYSSEHSLKDAKQLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLM--SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 V I + + + S+ Q++ + ENIQ+RIRGNILM +SN ++LTT NKS Sbjct: 345 VYSIEEPFKAYLKMFNGSEVAQQD---LAEENIQARIRGNILMFISNRENRLVLTTGNKS 401 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K P Sbjct: 402 ELAVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPP 452 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP+Q DQ++LPPY +LD I+ +E ++S + Y + V V ++ +EYK Sbjct: 453 SAELRPNQKDQDTLPPYEVLDPILIAYIEEQKSIEEIVEMGYPKDLVLKVIKMVERAEYK 512 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R+QA G K+T+K+FG R PI ++ Sbjct: 513 RKQAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|148360612|ref|YP_001251819.1| glutamine dependent NAD+ synthetase [Legionella pneumophila str. Corby] gi|296106322|ref|YP_003618022.1| NAD synthase (glutamine-hydrolysing) [Legionella pneumophila 2300/99 Alcoy] gi|148282385|gb|ABQ56473.1| glutamine dependent NAD+ synthetase [Legionella pneumophila str. Corby] gi|295648223|gb|ADG24070.1| NAD synthase (glutamine-hydrolysing) [Legionella pneumophila 2300/99 Alcoy] gi|307609529|emb|CBW99027.1| hypothetical protein LPW_08121 [Legionella pneumophila 130b] Length = 536 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 220/562 (39%), Positives = 302/562 (53%), Gaps = 29/562 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L + +AQ+NP VG I N K + ++ D+I+F EL +SGYP EDL+F+K Sbjct: 1 MNAPLTVLMAQINPTVGAIDANTNKILDVIKN-HQASHDVIIFPELTLSGYPAEDLLFRK 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + ++ T D ++VG P N I G I K LPNY Sbjct: 60 EYHDKILINLHDIQDTTKD--CYVIVGHPMMHIGDCYNGFSIFYQGEKIREYHKQKLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F E R F G DP V ++ +LG +CED+W+ + L G L SLNASP Sbjct: 118 GVFDEARYFTPG-KKDPCVLSIKNHKLGFCVCEDLWQKGPV-DDLLDSGISILISLNASP 175 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + + K + R E++ + IIYVNQ+GGQD+L+FDG S D Q + F E Sbjct: 176 FDYRKYQLREELLRSYAKQ-GVSIIYVNQIGGQDDLLFDGQSLAMDNQGIIRALAPAFEE 234 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 L N + ++ L +E Y A V RDYV+KNNF V++G Sbjct: 235 S-----------LCTVNIDGNKIDGSITPYLDKEALIYKALVCGTRDYVRKNNFPGVLLG 283 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AIAVDALG E V +++P +YT+ S EDA L + ++PI + Sbjct: 284 LSGGIDSALTLAIAVDALGAEQVHAVLMPSRYTASISNEDALEQLSNLKVAHSIIPIEPM 343 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + ++ P ENIQ+RIRG +LMALSN + M+LTTSNKSE +VGY TL Sbjct: 344 FQSMIESLHPVFKDLPPDTTEENIQARIRGMLLMALSNKTGKMVLTTSNKSETAVGYATL 403 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGF LKD+ KTQV++L +RN ++ VIP ++ + PSAEL+P+QT Sbjct: 404 YGDMAGGFAVLKDVLKTQVYELVRYRNK---------ISLVIPERVITRPPSAELKPNQT 454 Query: 479 DQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLP Y LD II +E S + + + V + L+ +EYKRRQA G K Sbjct: 455 DQDSLPEYGELDAIIMAYMEQNLSPSEIIAKGFKPQVVNKIIQLIKRNEYKRRQAAPGIK 514 Query: 538 ITAKSFGRDRLYPISNKFRDHI 559 I+ +FG+D YPI+N F I Sbjct: 515 ISNLAFGKDWRYPITNGFNQCI 536 >gi|312134229|ref|YP_004001567.1| nad+ synthetase [Caldicellulosiruptor owensensis OL] gi|311774280|gb|ADQ03767.1| NAD+ synthetase [Caldicellulosiruptor owensensis OL] Length = 540 Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 214/567 (37%), Positives = 313/567 (55%), Gaps = 44/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + Q+NP+VGDI GN K + + + +++F EL I GYPP+DL+F+K FI Sbjct: 1 MKILLCQINPIVGDIEGNTKKIIEIIK--SHKDAKILVFPELSICGYPPKDLLFQKDFID 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + D + ++VG P + + NS +IL G I V K LP+Y Sbjct: 59 AIEKAIEKIAKAVED--SFVIVGSPTKSHHVSKLFNSAIILHQGKIEKVIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R F+ G + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFMPGPTREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELYQKGAKVFIN 176 Query: 174 LNASPYYHNKLK-KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ +R +++ P+IYVNQVGG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKDAAKAYGFPVIYVNQVGGNDELIFDGNSMVISSDGRLVGK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E ++ + D S A VL +RDY K Sbjct: 237 AKEFEEDIVEIELEKIDKIPEIEIHEDISWIK------------KALVLGIRDYFDKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +AV+ALGKENV + +P +Y+S SL+DA A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGKENVLGVAMPSRYSSEHSLKDARKLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 V I + F + + F E + + ENIQ+RIRGNILM +SN ++LTT NKS Sbjct: 345 VYSIEE---PFKAYLRMFNGSEVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKS 401 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K P Sbjct: 402 ELAVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPP 452 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP+Q DQ++LPPY +LD I+ +E ++S Y + V + ++ +EYK Sbjct: 453 SAELRPNQKDQDTLPPYEVLDPILVAYIEEQKSIDEIVSMGYPKDLVIKIIKIVERAEYK 512 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R+QA G K+T+K+FG R PI ++ Sbjct: 513 RKQAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|149277080|ref|ZP_01883222.1| NAD+ synthetase [Pedobacter sp. BAL39] gi|149231957|gb|EDM37334.1| NAD+ synthetase [Pedobacter sp. BAL39] Length = 546 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 204/562 (36%), Positives = 312/562 (55%), Gaps = 31/562 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +G+ N K + A +G DL++F EL I GYP D + + FI Sbjct: 1 MKIALAQLNYHIGNFESNTKKIIEHVQLARSKGADLVVFAELAICGYPARDFLEFEEFIT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKINLPNY 120 C A++ + + G +VG P ++Q + + N+ V ++ G+I K LPNY Sbjct: 61 LCEQAVEEIAAQCT--GIACIVGLPVKNQVLAGKDLYNAAVFIEDGDIKQTVRKALLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-------ICKHLKKQGAEFLFS 173 F E R F + F+ ++ + ICED+W +N L +Q + + + Sbjct: 119 DVFDEYRYFEPATQFACVPFQGKKIALTICEDLWNINNNPLYISSPMDELIRQQPDLMIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + +R +++ LP++YVNQVG Q E+IFDG S FD Q QL +M Sbjct: 179 IAASPFSYCHDDERVVVLSDNARKYQLPLLYVNQVGAQTEIIFDGGSMAFDNQGQLLDEM 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 +FSE + E+ D ++ + +P + E ++A VL ++DY QK+ F Sbjct: 239 AYFSEDLRIYEFEDD------HFKGLSPVAQRAVP--DIEQIHDALVLGIKDYFQKSGFS 290 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSAL A+A ALG ENV +++P KY+S S++DA + GCK++++ Sbjct: 291 KAVLGLSGGIDSALVCALACRALGPENVMAVLMPSKYSSDHSVKDALDLVENFGCKHEII 350 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I + + F +++ Q P + ENIQ+R RG ++MA+SN +LL TSNKSE +V Sbjct: 351 EIKAVADAFDEILAPAFQGLPFNLTEENIQARCRGVVVMAMSNKFGYILLNTSNKSECAV 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM G + D+YKTQV+QL + N GI +IP + + K PSAEL Sbjct: 411 GYGTLYGDMCGAIGVIGDVYKTQVYQLCHYMNKDGI---------LIPENSIVKPPSAEL 461 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP Q D +SLP Y LD I+ +E ++S Q ++++ VR V ++ +E+KR Q Sbjct: 462 RPGQKDSDSLPDYDTLDQILYHYIEQKQSSARIIAQGFDEQLVRRVIKMVNNAEFKRYQT 521 Query: 533 PVGTKITAKSFGRDRLYPISNK 554 P +++ K+FG R PI K Sbjct: 522 PPILRVSPKAFGMGRRMPIVGK 543 >gi|67920546|ref|ZP_00514066.1| NAD+ synthase [Crocosphaera watsonii WH 8501] gi|67858030|gb|EAM53269.1| NAD+ synthase [Crocosphaera watsonii WH 8501] Length = 562 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 214/575 (37%), Positives = 322/575 (56%), Gaps = 42/575 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GDI N +A E A + L+L EL + GYPP+DL+ SF++ Sbjct: 1 MKIAIAQLNPIIGDIENNAQNICKAAEIAVQGEAQLLLTPELSLCGYPPKDLLLNASFVE 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLP 118 + ++ L + G V+ P EG + NS+V+++ I + K LP Sbjct: 61 MLWAELEKLAKTIPNNLTVLVGTVIENPNAYNEGKKPLFNSIVLIENQTIKQIFHKRLLP 120 Query: 119 NYSEFHEKRTFISGY--------SNDPIVFRDIRLGILICEDIWKN----------SNIC 160 Y F E R F G SN P + +++G+ ICED+W + +N Sbjct: 121 TYDVFDEDRYFEPGKESNFFQLSSNIPNT-KPLKIGVTICEDLWNDEEFWGKRNYENNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L K G + + +L+ASPY K K R ++ +PIIY NQVGG D+LIFDG S Sbjct: 180 QDLVKYGVDLVVNLSASPYSVGKQKIREAMLKHSAERYQVPIIYTNQVGGNDDLIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F + +++ + K + + E+ + + + +Y+++ + EEE +++ V Sbjct: 240 FAVSRKGEISLRAKGYQTAIEVIEYDQNNEDLKTSYIANSIET-------EEEEIWSSLV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DY K F K I+GLSGGIDS+L AAIAV+ALGKENV I++P Y+S S+ D Sbjct: 293 LGLKDYATKCGFSKAILGLSGGIDSSLVAAIAVEALGKENVLGILMPSPYSSSHSISDGE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A LG L I D++ + L+ + G+ EN+QSRIRGN+LMA++N Sbjct: 353 ALVNNLGINSHTLAIGDVMKAYDLLLEPLFKNTEFGVAEENLQSRIRGNLLMAIANKFGH 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H EVI Sbjct: 413 LLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFSLCKWLNRH---------QEVI 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVE 519 P +I+ K PSAEL+P Q DQ+SLP Y ILD I+ R++ +S ++ +T+ + Sbjct: 464 PHNIIVKPPSAELKPDQLDQDSLPAYDILDAILDRLIHRHQSVKEITAAGFDYDTICKIV 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 L+ +E+KR+QAP G K++ ++FG PI+++ Sbjct: 524 KLVNRAEFKRKQAPPGLKVSDRAFGTGWRMPIASR 558 >gi|254391519|ref|ZP_05006720.1| NH(3)-dependent NAD(+) synthetase [Streptomyces clavuligerus ATCC 27064] gi|197705207|gb|EDY51019.1| NH(3)-dependent NAD(+) synthetase [Streptomyces clavuligerus ATCC 27064] Length = 589 Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 215/595 (36%), Positives = 314/595 (52%), Gaps = 52/595 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L + + Q++ VGD++GN R + QG L+ F E+ ++GYP EDL + S Sbjct: 4 VPQLLLTLNQIDSTVGDLSGNAESIVRRTRHSAEQGAHLVAFPEMALTGYPVEDLALRAS 63 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSVVILDAGNI 108 F+ A +A+ L D G ++VG+ P Q N+ +L G + Sbjct: 64 FVAASRAALLALAVRLADEDLGELPVIVGYLDRSEAAQPTYGQPAGAPRNAAAVLHRGEV 123 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + I + + + ICED+W++ + GA Sbjct: 124 VLSFAKHHLPNYGVFDEFRYFVPGDTLPVIRVHGVDVALAICEDLWQDGGRVPAARSAGA 183 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY NK R E+V + Y+ +GGQDEL+FDG S D + Sbjct: 184 GLLISINASPYEQNKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDASGE 243 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIP-------- 268 + + FSE + + D L + + Y P Sbjct: 244 VVARAPQFSEGCVVLDLELPAAAPGIPSGIVDDGLRIDHVVVSADPLPSYDPELTGGYAE 303 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR Y KN F V+IGLSGGIDSAL AAIA DA+G +NV + +P Sbjct: 304 RLDDDEEVYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAAIACDAVGAQNVYGVSMP 363 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G + + I L + + ++ +G+ EN+QSR+R Sbjct: 364 SKYSSEHSKDDAAELARRTGLHFRTVSIEPLFDAYMGSLAL------TGLAEENLQSRLR 417 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 418 GTLLMAVSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTTVFRLAHWRNRA 477 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFI 504 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ + E+ + Sbjct: 478 AEERGQTP---PIPEASITKPPSAELRPGQMDTDSLPDYDVLDRILELYVDRDQGKEAIV 534 Query: 505 NN--DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D+E T+R V+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 535 AAGFDEELVTRTLRLVDT----AEYKRRQYPPGTKISAKGFGKDRRLPITNRWRE 585 >gi|282861535|ref|ZP_06270599.1| NAD+ synthetase [Streptomyces sp. ACTE] gi|282563351|gb|EFB68889.1| NAD+ synthetase [Streptomyces sp. ACTE] Length = 584 Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 217/595 (36%), Positives = 312/595 (52%), Gaps = 52/595 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLAGNSESVVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL----------NSVVILDAGNI 108 F++A A+ L + D G G +VVG+ + + N+ +L G + Sbjct: 61 FVEASRRALRALAARLADEGFGELPVVVGYLDRSEHTAARYGQPAGSPRNAAAVLHRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G S + I + + ICED+W+ + GA Sbjct: 121 ALNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQEGGRVPAARAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMMGGQDELVFDGDSIVVDKDGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIP-------- 268 + + FSE + + + + +L + + D Y P Sbjct: 241 VLARAPQFSEGSVILDLDLPAAAAEVPSGIVNDELRIDHVVLSDEPLPAYEPELAGGYAQ 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR Y KN F V+IGLSGGIDSAL AAIA DALG ENV + +P Sbjct: 301 RLDDDEELYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAAIACDALGPENVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G Y + I + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNYRTVSIEAMFDAYMGELGL------TGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES----- 502 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPDQVDTDSLPDYDVLDRILELYVDRDQGRDAIV 531 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D E +T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDAELVTKTLRMVDT----AEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 582 >gi|171912399|ref|ZP_02927869.1| NAD+ synthetase [Verrucomicrobium spinosum DSM 4136] Length = 543 Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 213/566 (37%), Positives = 312/566 (55%), Gaps = 36/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+N VGD +GN A +A EA QG L++ EL ++GYPP DLV + F+ Sbjct: 1 MKIGLAQINTTVGDFSGNSALILKAYREAVAQGAQLVITPELAMTGYPPRDLVHRSRFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ---EGVLNSVVILDAGNIIAVRDKINLPNYS 121 A+ L G ++VGF ++ + N+ +L AG I V K LP Y Sbjct: 61 GNIEALRQLAGAV--GAVPLIVGFVDVNEGAGKPFRNAAAVLQAGRIHQVVAKTLLPTYD 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL---------KKQGAEFLF 172 F E R F + P+V IR+G+ ICEDIW + + + L KQG + L Sbjct: 119 VFDEDRYFEPEENLVPVVIEGIRVGVTICEDIWTDDYLPRRLYDVEPPIELAKQGVDLLV 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +L+ASP+ K R +++ + +P++Y N VGG D+L+FDG S ++ + Sbjct: 179 NLSASPFSLGKPTIREKMLGELAAETGVPVVYCNAVGGNDQLVFDGNSLVIGKDGEVLAR 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 + F+E+ ++ + +S A P+ E Y A VL LRDYV K F Sbjct: 239 LASFAEE-----------VAVVDVLSGAGARAAE-PMVVAEELYQALVLGLRDYVTKCGF 286 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 ++GLSGGIDSAL A +A +ALG NV + LP Y+S S +DA A+ LG +Y+ Sbjct: 287 KSCVLGLSGGIDSALVAVLAAEALGPANVLGVSLPSVYSSEGSKDDARELAEKLGIQYET 346 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI + + +P + EN+QSRIRG ILM+LSN +LLTT NKSE++ Sbjct: 347 IPIQSVFEALKGQTREVFAGKPEDVTEENMQSRIRGLILMSLSNKFGHLLLTTGNKSEMA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY T+YGDM GG + + DL KT+V++++ W N E+IP + +EK PSAE Sbjct: 407 VGYCTIYGDMCGGLSVISDLPKTKVYEVSRWINRE---------REIIPWASIEKPPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP Q DQ++LP Y +LD I++ VE +S + Y++E VR+V + +E+KR Q Sbjct: 458 LRPDQKDQDTLPEYDVLDGILELFVEQGQSIAEIVARGYDEELVRWVLRRVDLNEWKRHQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKFRD 557 A G K+T+K+FG R PI +FR+ Sbjct: 518 AAPGLKVTSKAFGMGRRIPIVQRFRE 543 >gi|196230695|ref|ZP_03129556.1| NAD+ synthetase [Chthoniobacter flavus Ellin428] gi|196225036|gb|EDY19545.1| NAD+ synthetase [Chthoniobacter flavus Ellin428] Length = 543 Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 210/564 (37%), Positives = 299/564 (53%), Gaps = 36/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI AQLN VGD+ GN K A + +QG +L+L EL ++GYPP+DLVFK F+ Sbjct: 1 MKIGFAQLNTTVGDLRGNAEKILAAYRDLVKQGAELVLTPELALTGYPPQDLVFKSRFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ---EGVLNSVVILDAGNIIAVRDKINLPNYS 121 +D L G ++VGF + + N+ +L G + K LP Y Sbjct: 61 LNLEKLDELHRSV--GEVPLLVGFIDINHGSGQPFHNAAAVLQRGQPLRKVHKSLLPTYD 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK---------KQGAEFLF 172 F E R F +PI + G+ ICEDIW + + L +QG E + Sbjct: 119 VFDEDRYFEPAKCVEPIEIAGKKFGVTICEDIWTEKYLPRRLYGNSPVGSLVEQGIEAIL 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +L+ASP+ K +R E++ LPI Y N +GG D+L+FDG S FD L + Sbjct: 179 NLSASPFSIGKAARRAEMLGALAREHRLPIHYCNAIGGNDQLVFDGNSLAFDATGALHTR 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 + F+E+ + E + S P EE Y A L RDY+ K F Sbjct: 239 LAPFAEECAVVELN-----------PSSSTPVTAFPSAPEELFY-ALSLGTRDYLHKCGF 286 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 H ++GLSGGIDSA+ A IA ALG E+V + +P +Y+S S++D+ A AK LG + Sbjct: 287 HSTVLGLSGGIDSAVTACIAAHALGTEHVLGVTMPTQYSSQGSVDDSLAIAKNLGIRCLT 346 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI F + P EN+Q R+RG LMALSN ++LLTT NKSE++ Sbjct: 347 IPIQRSFETFREQFREVFTGLPEDTTEENMQPRLRGMTLMALSNKFGSLLLTTGNKSELA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGDM GG + D+ KT V++LA W N E+IP + +EK PSAE Sbjct: 407 VGYCTLYGDMCGGLAVISDVPKTMVYELAEWINRD---------REIIPRATIEKPPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 L+P Q DQ++LPPY +LD I++ VE + S + ++++TVR+V + +EYKR Q Sbjct: 458 LKPDQRDQDTLPPYEVLDPILQLYVEEQLSGAEIIARGFDEKTVRWVVRRVDLNEYKRAQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKF 555 A G K+T ++FG R P++ +F Sbjct: 518 AVPGLKVTGRAFGLGRKMPVAQRF 541 >gi|328952407|ref|YP_004369741.1| NAD+ synthetase [Desulfobacca acetoxidans DSM 11109] gi|328452731|gb|AEB08560.1| NAD+ synthetase [Desulfobacca acetoxidans DSM 11109] Length = 546 Score = 352 bits (904), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 214/567 (37%), Positives = 307/567 (54%), Gaps = 39/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + I IAQL+ VVGDI GN A+A + EA DL++F EL+++ YPP DL+ K S I Sbjct: 1 MNITIAQLDAVVGDIDGNAARAVKVFSEAAGNS-DLVVFPELYLTAYPPRDLLEKHSLIN 59 Query: 65 ACSSAIDTLKS-DTHDGGAGIVVGFP----RQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 A++ L+ G+++G P +G+ N+ +++ G I + K LP Sbjct: 60 RVQQAVEELREVSARHPETGLLIGAPVPTGLATGKGLYNAALLIYQGQI-NWQAKSLLPT 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW----KNS------NICKHLKKQGAE 169 Y F E R F F+D LG+ ICED W N+ N + L +QGA Sbjct: 119 YDVFDESRYFDPPALVRVFPFKDEILGVSICEDAWYEYDANARRLYLFNPIQELAQQGAT 178 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 +++ASP++ K + R ++ G +P I VNQVGG DELIFDG S D Q Sbjct: 179 IFINISASPFHCGKEEIRRRLIQGHCQAYQVPFILVNQVGGNDELIFDGRSMVLDAQGTP 238 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F E + S + +Y P E + ++A +L L+DY++K Sbjct: 239 VAVLPAFEEAVVTVD------------TSVSGRAEIYQPAAEIASVHDALILGLKDYLRK 286 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F K ++GLSGGIDSA+ +A ALG ENV +++P Y+SP S+ D+ A LG K Sbjct: 287 CGFSKAVVGLSGGIDSAVTCYLARQALGLENVLGVIMPSLYSSPGSIADSERLADNLGVK 346 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 +PI + + S + + ENIQ+RIRGNILMA SN M+L+T NKS Sbjct: 347 TCTVPITPIYQAYLSSLPACFPVGDLDVALENIQARIRGNILMAFSNRLGYMVLSTGNKS 406 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDMSGG + D+ KT ++ LA + N E+IP IL K P Sbjct: 407 ELAVGYCTLYGDMSGGLAVISDVPKTMIYDLARYINRQ---------RELIPQEILTKPP 457 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP+Q DQ++LPPY ILD I++ + + D+ ++ ETVR+V + +EYK Sbjct: 458 SAELRPNQRDQDTLPPYEILDQILEYYINEGWGYQEIVDRGFDPETVRWVIQAVDRNEYK 517 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 RRQA G K+T+K+FG R PI+ ++ Sbjct: 518 RRQAAPGLKVTSKAFGSGRRMPIAARY 544 >gi|182439051|ref|YP_001826770.1| putative NH3-dependent NAD+ synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779702|ref|ZP_08238967.1| NAD+ synthetase [Streptomyces cf. griseus XylebKG-1] gi|178467567|dbj|BAG22087.1| putative NH3-dependent NAD+ synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660035|gb|EGE44881.1| NAD+ synthetase [Streptomyces cf. griseus XylebKG-1] Length = 584 Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 215/595 (36%), Positives = 315/595 (52%), Gaps = 52/595 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLAGNAEAIVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL----------NSVVILDAGNI 108 F++A ++ L + G G +VVG+ + + N+ +L G I Sbjct: 61 FVEASRQSLRALAARLDAEGFGELPVVVGYLDRSEHAAARYGQPAGSPRNAAAVLHRGGI 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G S + I + + ICED+W++ + GA Sbjct: 121 ALNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + + Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDKEGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIP-------- 268 + + FSE + + + D L + + D Y P Sbjct: 241 VIARAPQFSEGSVILDLELPAAGAEAPSGVVDDGLRIDHVVLSDRPVEAYEPELAGGYAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L +EE Y+A V+ LR Y KN F V+IGLSGGIDSA+CAAIA DALG ++V + +P Sbjct: 301 RLGDEEEIYSALVVGLRAYAAKNGFSSVLIGLSGGIDSAICAAIACDALGAQHVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + +PI + + + + E +G+ EN+Q+R+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTVPIEPMFDAYMESL------ELTGLAEENLQARLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA WRN Sbjct: 415 GTTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF---- 503 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYEVLDAILELYVDRDQGLDAIV 531 Query: 504 -INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 D E +T+R V+ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDAELVAKTLRMVD----AAEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 582 >gi|312623382|ref|YP_004024995.1| nad+ synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203849|gb|ADQ47176.1| NAD+ synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 540 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 213/568 (37%), Positives = 319/568 (56%), Gaps = 46/568 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K R + + + +++F EL I GYPP+DL+F+K FI+ Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIRIIK--SHRDAKILIFPELAICGYPPKDLLFQKDFIE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + + D + ++VG P + + NS +I G I + K LP+Y Sbjct: 59 AVDKAIEEIAKEVDD--SFVIVGSPTKSHHVSKLFNSAIIFHQGKIEKIIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R FI + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFIPSPAREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELSQKGAKMFIN 176 Query: 174 LNASPYYHNKLK-KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASP+++ KLK +R +++ + +P+IYVNQVGG DELIFDG S ++ + Sbjct: 177 LSASPFHYTKLKTQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVVSSNGKVVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E ++ + D S A VL +RDY +K Sbjct: 237 AKEFEEDILEIELEKIDKMPEVEIHEDISWIK------------KALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALG ENV + +P +Y+S SL+DA A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAAEALGPENVLGVAMPSRYSSEHSLKDAKQLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 V I + F + + F E + + ENIQ+RIRGNILM +SN ++LTT NKS Sbjct: 345 VYSIEE---PFKAYLKMFNGSEIALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKS 401 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K P Sbjct: 402 ELAVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPP 452 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE--YNDETVRYVEHLLYGSEY 527 SAELRP+Q DQ++LPPY +LD I+ +E+++S IN E Y + V V ++ +EY Sbjct: 453 SAELRPNQKDQDTLPPYEVLDPILISYIEDQKS-INEIVEMGYPKDLVLKVIKMVERAEY 511 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KR+QA G K+T+K+FG R PI ++ Sbjct: 512 KRKQAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|126660538|ref|ZP_01731644.1| NAD synthetase [Cyanothece sp. CCY0110] gi|126618181|gb|EAZ88944.1| NAD synthetase [Cyanothece sp. CCY0110] Length = 562 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 214/576 (37%), Positives = 328/576 (56%), Gaps = 40/576 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GDI N +A + A + L+L EL + GYPP+DL+ SF++ Sbjct: 1 MKIAIAQLNPIIGDIENNAQNIYKAAQIAVEKNAQLLLTPELSLCGYPPKDLLLNASFVK 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLP 118 + + L + + A G V P +EG + NS+++++ I + +K LP Sbjct: 61 NTWTQLQELANKLPNNLAVLVGTVTENPHAYREGEKPLFNSIILIENQAIKQIFNKRLLP 120 Query: 119 NYSEFHEKRTFISGYSND-------PIVFRDIRLGILICEDIWKN----------SNICK 161 Y F E R F G ++ + I++G+ +CED+W + +N + Sbjct: 121 TYDVFDEDRYFEPGKESNFFQLSSRISSIKSIKIGVTVCEDLWNDEEFWGKRNYQTNPIQ 180 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L G + +L+ASPY K K R ++ ++PIIY NQVGG D+LIFDG SF Sbjct: 181 DLVNNGVNLVVNLSASPYSIGKQKIREAMLKHTAKRHNIPIIYTNQVGGNDDLIFDGNSF 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL 281 + + ++A + K F + E+ + Q + +Y++D I +EEE + A VL Sbjct: 241 AVNRKGEIALRAKGFQTAIEIIEYEENSQDLKVSYIADS------IETKEEEI-WLALVL 293 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 L+DY K F K ++GLSGGIDS+L AAIAV+ALGKENV I++P Y+S S+ DA A Sbjct: 294 GLKDYAHKCGFSKAVLGLSGGIDSSLVAAIAVEALGKENVLGILMPSPYSSTHSIRDAEA 353 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 L + L I D++ + SL+ Q G+ EN+QSRIRGN+LMA++N + Sbjct: 354 LVNNLEINSNTLAIGDVMKAYDSLLEPLFQGTEFGVAEENLQSRIRGNLLMAVANKFGHL 413 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H EVIP Sbjct: 414 LLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFSLCKWLNRH---------QEVIP 464 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEH 520 +++ K PSAEL+P Q D++SLP Y ILD I+ R++ +S + + ++ + + V Sbjct: 465 HNVIIKPPSAELKPDQVDEDSLPSYDILDAILDRLIHRHQSIKEIEADGFDHDIICKVVK 524 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KR+QAP G K++ ++FG PI+++++ Sbjct: 525 LVTRAEFKRKQAPPGLKVSDRAFGTGWRMPIASRWQ 560 >gi|302870926|ref|YP_003839562.1| NAD+ synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302573785|gb|ADL41576.1| NAD+ synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 540 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 214/567 (37%), Positives = 314/567 (55%), Gaps = 44/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + Q+NP+VGDI GN K + + +++F EL I GYPP+DL+F+K FI Sbjct: 1 MKILLCQINPIVGDIEGNTKKIIEIIK--SHADAKILIFPELSICGYPPKDLLFQKDFID 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + D + ++VG P + + NS +IL G I V K LP+Y Sbjct: 59 AVEKAIEKIAKVVED--SFVIVGSPTKSHHVSKLFNSAIILHQGKIEKVIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R FI + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFIPSLAREVVTIEGINFGISICEDIWNINNDENALYDINVLDELYQKGAKVFIN 176 Query: 174 LNASPYYHNKLK-KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ +R +++ + +P+IYVNQVGG DELIFDG S ++ + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVLSSSGKVVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E ++ + D S A VL +RDY +K Sbjct: 237 TKEFEEDILEIELEKIDKMPEVEIHEDISWIK------------KALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALGKENV + +P +Y+S SL+DA A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLATEALGKENVLGVAMPSRYSSEHSLKDAKQLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 V I + F S + F E + + ENIQ+RIRGNILM +SN ++LTT NKS Sbjct: 345 VYSIEE---PFKSYLKMFNGSEVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKS 401 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K P Sbjct: 402 ELAVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPP 452 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP+Q DQ++LPPY +LD I+ +E ++S + Y + V V ++ +EYK Sbjct: 453 SAELRPNQKDQDTLPPYEVLDPILVAYIEEQKSIDEIVEMGYPKDLVLKVIKMVERAEYK 512 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R+QA G K+T+K+FG R PI ++ Sbjct: 513 RKQAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|282892089|ref|ZP_06300564.1| hypothetical protein pah_c207o013 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497984|gb|EFB40328.1| hypothetical protein pah_c207o013 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 544 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 201/567 (35%), Positives = 310/567 (54%), Gaps = 40/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ+NP++GD+ GN + A E+ + +DL++F EL + GYPPED++ +F++ Sbjct: 1 MRVLLAQINPIIGDLKGNTQQILAAIEKGKQNRIDLMVFPELALCGYPPEDILLLPNFME 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 + T+ S T G +++G PR + ++ + NS I+ I+ +DK LP Y Sbjct: 61 EVECHLKTIVSQTQ--GIAVLLGLPRSNPDVLEKKLYNSAAIIQDQKILGYQDKQLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICK----------HLKKQGAEF 170 F E+R F G + I ICED+W++SN+ K +L + Sbjct: 119 DVFDERRYFEPGNHTRLWSLCGKNIAITICEDMWQHSNLLKFTNYRQDPIQNLLPLSPDL 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +L+ASP+ +L+ R + + P + NQVGG D LIFDG S D +L Sbjct: 179 LINLSASPFCIGQLRHRFTTICKAAMTLQCPAVLCNQVGGNDSLIFDGHSCFVDNMGRLC 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 K F E + + + L + ++ E Y+A VL +RDY K+ Sbjct: 239 SVAKGFQEDLHIVD--LSEPLPPFEWIESPV-----------EMLYSALVLGVRDYFHKS 285 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +GLSGGIDSAL A IAV+ALG +NV + +P +Y+S SLEDA AK L + Sbjct: 286 GFKHACLGLSGGIDSALVACIAVEALGHQNVLGVAMPSRYSSTGSLEDAKKLAKNLQIEL 345 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +PI + L++ F + +P+ EN+Q+RIRG ILM+LSN ++L+T NKSE Sbjct: 346 LNIPIEGPFQSYLHLLNPFFENKPADATEENLQARIRGMILMSLSNKHGYIVLSTGNKSE 405 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM GG + D+ K +V+ L+ W N + E+IP + + K PS Sbjct: 406 LAVGYSTLYGDMCGGLGVINDVSKQEVYALSKWINRN---------REIIPWNTIHKPPS 456 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEES--FINNDQEYNDETVRYVEHLLYGSEYK 528 AELRP+Q D ++LP Y ILD I+K VE ++ +I + E V+ + ++ +EYK Sbjct: 457 AELRPNQKDSDTLPSYEILDAILKDYVEEHQTPQWIAEKHHFPVELVQSIIRKIHQNEYK 516 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 RRQ+P G ++T K+F R +PI K+ Sbjct: 517 RRQSPPGLRVTEKAFTIGRKFPIVQKW 543 >gi|320352986|ref|YP_004194325.1| NH(3)-dependent NAD(+) synthetase [Desulfobulbus propionicus DSM 2032] gi|320121488|gb|ADW17034.1| NH(3)-dependent NAD(+) synthetase [Desulfobulbus propionicus DSM 2032] Length = 541 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 212/573 (36%), Positives = 311/573 (54%), Gaps = 56/573 (9%) Query: 5 LKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 +KIA+ Q NP++G N I KAR+AR DL++F EL + GYPP+DL+ Sbjct: 1 MKIALIQTNPIIGAFERNLRQVLHWIGKARQAR-------CDLVVFPELTLCGYPPQDLL 53 Query: 58 FKKSFIQACSSA-IDTLKSDTHDGGAGIVVGFPRQDQ---EGVLNSVVILDAGNIIAVRD 113 + +F+ A +D +K G +VG P + Q + + NS +L+ I Sbjct: 54 ERPAFLDGHDRALVDLVK---QLAGISCIVGVPERRQGPGKPLYNSAYVLERDKIAVRAR 110 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH-------LKKQ 166 K LP Y F E R F G ++ + + G+ ICEDIW NS I + Sbjct: 111 KQLLPTYDVFDETRYFEPGTTSTVFPCKGVHCGLTICEDIWWNSEIYPTDPLKDLVIGPI 170 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + L +++ASPY++ KL++R ++ T +LP++YVNQVGGQD LIFDG S + Sbjct: 171 VPDCLINISASPYHYGKLEERQQVFTRLCRDNNLPLLYVNQVGGQDGLIFDGHSMVMTPR 230 Query: 227 QQLAFQMKHFSEQNFMTEWH-YDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 L F E + + +D+ Q + DS + + A VL +RD Sbjct: 231 GTLRAVAAGFGEDMLVVDSEDWDRDGGQ---LPADSVADVE----------QALVLGVRD 277 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y+ K F + ++GLSGGIDSA+ A IA ALG ENV + +P YTS S++DA A Sbjct: 278 YLHKTGFRRAVLGLSGGIDSAVTAVIACRALGPENVLCVAMPSPYTSQASIDDARQLAAN 337 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LGC ++++ I L+ + + ++ +NIQ+RIRGN+LMALSN K +LLTT Sbjct: 338 LGCDFEIIAISALMETYRASLAPLFTGLAEDATEQNIQARIRGNLLMALSNKFKRLLLTT 397 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY TLYGDMSGG + D+ K V++LA N E+IP I+ Sbjct: 398 GNKSEMAVGYCTLYGDMSGGLAVIADVPKIMVYELAHLLNRE---------RELIPERII 448 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLL 522 + P+AEL+P Q DQ+ LPPY +LD ++K +E E+ + N Y+ + VR + + Sbjct: 449 TRPPTAELKPDQCDQDDLPPYEVLDGVLKAYLEEHKSIEAIVANG--YDAQMVRDIVRRI 506 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +EYKR+QAP+G K+T K+FG R YP+ F Sbjct: 507 KLNEYKRKQAPLGIKVTTKAFGPGRRYPLVQGF 539 >gi|87125423|ref|ZP_01081269.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. RS9917] gi|86167192|gb|EAQ68453.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. RS9917] Length = 585 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 214/589 (36%), Positives = 317/589 (53%), Gaps = 47/589 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAK--ARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++IA+AQ+NP+VGD+ GN A+ A + + + DL+L EL + GYPP DL+ + Sbjct: 1 MRIALAQINPLVGDLPGNAARILAACQQSQQQSEPADLLLTPELSLWGYPPRDLLLNPTG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG------VLNSVVILDAGNIIAVRDKIN 116 + + +D L D HD + V + G + N+V ++ AG V K Sbjct: 61 VAQQQTVMDHLSQDLHDLAPALAVLVGVVEPAGDSALPHLFNAVALIQAGRWRVVGRKQL 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIW----------KNSNICKH 162 LP+Y F E R F + + + RLG+ ICED+W + Sbjct: 121 LPSYDVFDESRYFRAASGPSCLTLNLAGQPWRLGLTICEDLWVEPALQNQRLTGPDPVAA 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L+ G + L +L+ASP+ K R E+ + ++ P+IYVNQVGG DELIFDG SF Sbjct: 181 LEPLGVDLLLNLSASPFAQEKSPLRRELAARAAARLNCPVIYVNQVGGNDELIFDGGSFV 240 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM-----------YIPLQE 271 D +Q + + Q + + + L W+ S +AS + + + Sbjct: 241 IDRPRQEGQAVPTLTLQLPICK----EALDLWDAGSTAAASELNPKGAAAIRPDHHAMSR 296 Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 EE A VL + DY K F + ++GLSGGIDSAL A IA ALG + VQ +++P ++ Sbjct: 297 EEQLLRALVLGVHDYAGKCGFQRALLGLSGGIDSALVAVIACAALGADRVQALLMPSPWS 356 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 S S+EDAAA A LG D PI L++ F + ++ LQ P+ + AEN+QSRIRG +L Sbjct: 357 SRGSIEDAAALAHRLGLHTDTTPIEALMDSFAATLTPVLQGPPADVTAENLQSRIRGTLL 416 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 MA++N +LL+T NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + Sbjct: 417 MAVANQQGQLLLSTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFALCDWLDSPASQT 476 Query: 452 -----GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESF 503 GL E++ I EK PSAELRP Q D +SLP Y +LD +++ ++E EE+ Sbjct: 477 CRRDLGLPTNGELVGRPIREKPPSAELRPDQKDSDSLPDYAVLDPLLRDLIEEHCGEEAL 536 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 + + + ET+ V L +E+KRRQAP K++ ++FG PI+ Sbjct: 537 LQ--RGHAPETITRVLRLFRRAEFKRRQAPPLLKVSRQAFGTGWRLPIA 583 >gi|170078390|ref|YP_001735028.1| NAD synthetase [Synechococcus sp. PCC 7002] gi|169886059|gb|ACA99772.1| NH(3)-dependent NAD(+) synthetase [Synechococcus sp. PCC 7002] Length = 568 Score = 350 bits (898), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 221/581 (38%), Positives = 324/581 (55%), Gaps = 43/581 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTEL---FISGYPPEDLVFKKS 61 +KIAIAQLNP +GD+ GN + A EEA + L+L EL ++S P DL+ Sbjct: 1 MKIAIAQLNPTIGDLTGNAERILVAAEEAAIANVRLLLTPELSPLWVSR--PRDLLLHAD 58 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-------NSVVILDAGNIIAVRDK 114 FI + + T+ + A ++VG + E + NS+ ++D G + + K Sbjct: 59 FIDRMQAQLTTVAAKIPPTLA-VLVGLATPNPEAIAKGEKALHNSIALIDQGKVQHIFHK 117 Query: 115 INLPNYSEFHEKRTFISGYSND-------PIVFRDIRLGILICEDIWKNS---------- 157 LP Y F E R F G ++ P V +++G+ ICED+W + Sbjct: 118 QLLPTYDVFDEDRYFEPGKQSNWFFLHPSPTV-APLKIGVTICEDLWNDQAFWGKRQYEI 176 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 N + L + G + + +L+ASPY K + R ++ PI+Y NQVGG D+LIFD Sbjct: 177 NPLEQLAEAGVDLIVNLSASPYTVGKQRLREGMLHHGAQRYRTPILYANQVGGNDDLIFD 236 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ-LSQWNYMSDDSASTMYIPLQEEEAD- 275 G S FD + QL + F E E+ DQQ LS + T+ +EA+ Sbjct: 237 GGSVAFDREGQLVGRSPSFQESLLAVEFSPDQQTLSLPQGLPAAFQQTISPEYDADEAEI 296 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 + A VL LRDY +K F K+++GLSGGIDSAL AAIAV A+G ENV +++P Y+S S Sbjct: 297 FAALVLGLRDYARKCGFSKIVLGLSGGIDSALVAAIAVAAVGAENVLGVLMPSPYSSEHS 356 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L DA A + L +++++PI + F +++ G+ EN+QSRIRGN+LMA++ Sbjct: 357 LSDAIALVENLQIRHEIIPIEPAMQAFETMLGDLFAGTEFGVAEENLQSRIRGNLLMAIA 416 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N +L++T NKSE++VGY TLYGDM+GG + D+ K +VF L W N Sbjct: 417 NKFGYLLVSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKMRVFSLCQWLNRD-------- 468 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDET 514 E+IPP+I+ K PSAELRP Q DQ+SLPPYP+LD+I+KR++ +S + Y+ +T Sbjct: 469 -RELIPPAIITKPPSAELRPDQLDQDSLPPYPVLDEILKRVIHRNQSAPELHAAGYDHDT 527 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V V LL+ +E+KRRQA G KIT ++FG PI+ ++ Sbjct: 528 VAQVLKLLHRAEFKRRQAAPGLKITDRAFGTGWRMPIACRW 568 >gi|333027559|ref|ZP_08455623.1| putative NH(3)-dependent NAD(+) synthetase [Streptomyces sp. Tu6071] gi|332747411|gb|EGJ77852.1| putative NH(3)-dependent NAD(+) synthetase [Streptomyces sp. Tu6071] Length = 586 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 212/598 (35%), Positives = 315/598 (52%), Gaps = 56/598 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VVGD+ N + A +G L+ F E+ ++GYP EDL + + Sbjct: 1 MPQLRLALNQIDAVVGDLDANAESVVQWTRHAAERGAHLVAFPEMVLTGYPVEDLALRST 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVGF-----PRQDQEGV-----LNSVVILDAGNI 108 F++A +A+ L + D GG +V+G+ Q + G+ N+ +L G + Sbjct: 61 FVEASRAALHALAARLVDEGLGGLPVVLGYLDRSETDQHRYGMPAGSPRNAAAVLHQGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 VLRFAKHHLPNYGVFDEFRYFVPGDTLPVVRVHGVDVALAICEDLWQDGGRVPATRAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R ++V + YV GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYVAMSGGQDELVFDGDSIVVDKDGS 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM------------------YIP-- 268 + + F+E F+ + L +++ A T+ Y P Sbjct: 241 VITRAPQFTEGCFLLD------LDLPPAPAEEPAGTVHDGLRIEHVTISPTPLPAYEPEY 294 Query: 269 -------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 L++ E Y A V LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV Sbjct: 295 TGEYAERLEDAEEVYGALVTGLRAYVEKNGFRSVLIGLSGGIDSALTAAIACDAIGAENV 354 Query: 322 QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + +P KY+S S +DAA A G Y PI + + + + + +G+ EN Sbjct: 355 YGVSMPSKYSSEHSKDDAADLAARTGLHYRSAPIAPMFDAYMAALGF------TGLAEEN 408 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +Q+R+RG LM +SN ++L NKSE++VGY TLYGD G + P+KD+YK+QVF LA Sbjct: 409 LQARLRGTTLMGISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSQVFALA 468 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 WRN G P IP + + K PSAELRP Q D +SLP Y +LD I+ V+ ++ Sbjct: 469 RWRNQAAEQRGETP---PIPENTIAKPPSAELRPGQVDTDSLPDYDVLDRILAMYVDRDQ 525 Query: 502 -SFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 S ++ V V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R++ Sbjct: 526 GSDAIVAAGFDPAVVARVLRMVDNAEYKRRQYPPGTKISAKGFGKDRRMPITNRWREN 583 >gi|302336809|ref|YP_003802015.1| NAD+ synthetase [Spirochaeta smaragdinae DSM 11293] gi|301633994|gb|ADK79421.1| NAD+ synthetase [Spirochaeta smaragdinae DSM 11293] Length = 552 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 219/568 (38%), Positives = 314/568 (55%), Gaps = 36/568 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q+N V+GD +GN K E+A QG DL++ EL + GYPP DL+ SF + Sbjct: 1 MKIALGQMNAVIGDFSGNRKKILDYAEKAAGQGSDLLITPELSLCGYPPMDLLDYASFSR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE---GVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ L+ D G A + VG+ + E G+ N V ++ G ++ + K LP Y Sbjct: 61 ENIHSLRILQRDLPKGIA-VAVGYVSVNNEAGKGLRNCVSVIRDGEVLFSQAKSLLPTYD 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEFL 171 F E R F + F ++G ICEDIW + + L GA+ + Sbjct: 120 VFDEARYFEPASTRKVFPFMGRKIGFAICEDIWWETEEAAGTRYPVDPVAELLDAGADMI 179 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 S +ASPYY+ KL R+ +++ S +P++YVN VGG D LIFDGAS +L Sbjct: 180 ISPSASPYYNGKLGVRYRLLSRIGSMGDVPVVYVNMVGGNDNLIFDGASMLVSPDGRLC- 238 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQK 289 H S W D +++ DS+ + + L EE EA A VL +RDYV+K Sbjct: 239 ---HIS-----PSWEED-----LSFIDPDSSISSSLALPEEGMEAVRRALVLGIRDYVEK 285 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F +V +GLSGGIDSAL A +AV+ALG+E V+ +P +Y+S SL DA A LG Sbjct: 286 CGFSRVHLGLSGGIDSALVATLAVEALGREQVRVFAMPSRYSSEGSLSDARKLADNLGIS 345 Query: 350 YDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + +PI + V+ SL F +P + EN+Q+RIRG ++MA SN ++LLTT NK Sbjct: 346 LETIPIEPMFVSSLDSLTPHFAGRQPD-VAEENVQARIRGLLMMAYSNKWGSLLLTTGNK 404 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++ GY TLYGDM GG + + DL+K +VF L N I G E+IP +I+ K Sbjct: 405 SELATGYCTLYGDMCGGLSVIGDLFKVEVFALCKHINERSIERG---GNEIIPQAIISKP 461 Query: 469 PSAELRPHQTDQESLPPYPILDDII-KRIVENEESFINNDQEYNDETVRYVEHLLYGSEY 527 PSAELR Q D++SLPPY +LD I+ +++NE + ++ E V + L+ +EY Sbjct: 462 PSAELREDQKDEDSLPPYEVLDGILFHYLLKNESADEIARAGFDREQVGQILSLVGKNEY 521 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KRRQAP KI+ ++FG R PI+ K Sbjct: 522 KRRQAPPVLKISPRAFGTGRRMPIARKI 549 >gi|302518666|ref|ZP_07271008.1| NAD(+) synthase [Streptomyces sp. SPB78] gi|302427561|gb|EFK99376.1| NAD(+) synthase [Streptomyces sp. SPB78] Length = 586 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 212/598 (35%), Positives = 315/598 (52%), Gaps = 56/598 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VVGD+ N + A +G L+ F E+ ++GYP EDL + + Sbjct: 1 MPQLRLALNQIDAVVGDLDANADSVVQWTRHAAERGAHLVAFPEMVLTGYPVEDLALRST 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVGF-----PRQDQEGV-----LNSVVILDAGNI 108 F++A +A+ L + D GG +V+G+ Q + G+ N+ +L G + Sbjct: 61 FVEASRAALHALAARLVDEGLGGLPVVLGYLDRSETDQHRYGMPAGSPRNAAAVLHQGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 VLRFAKHHLPNYGVFDEFRYFVPGDTLPVVRVHGVDVALAICEDLWQDGGRVPATRAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R ++V + YV GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYVAMSGGQDELVFDGDSIVVDKDGS 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM------------------YIP-- 268 + + F+E F+ + L +++ A T+ Y P Sbjct: 241 VITRAPQFTEGCFLLD------LDLPPAPAEEPAGTVHDGLRIEHVTISPTPLPAYEPEY 294 Query: 269 -------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 L++ E Y A V LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV Sbjct: 295 TGEYAERLEDAEEVYGALVTGLRAYVEKNGFRSVLIGLSGGIDSALTAAIACDAIGAENV 354 Query: 322 QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + +P KY+S S +DAA A G Y PI + + + + + +G+ EN Sbjct: 355 YGVSMPSKYSSEHSKDDAADLAARTGLHYRSAPIAPMFDAYMAALGF------TGLAEEN 408 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +Q+R+RG LM +SN ++L NKSE++VGY TLYGD G + P+KD+YK+QVF LA Sbjct: 409 LQARLRGTTLMGISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSQVFALA 468 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 WRN G P IP + + K PSAELRP Q D +SLP Y +LD I+ V+ ++ Sbjct: 469 RWRNQAAEQRGETP---PIPENTIAKPPSAELRPGQVDTDSLPDYDVLDRILAMYVDRDQ 525 Query: 502 -SFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 S ++ V V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R++ Sbjct: 526 GSDAIVAAGFDPAVVARVLRMVDNAEYKRRQYPPGTKISAKGFGKDRRMPITNRWREN 583 >gi|307327840|ref|ZP_07607023.1| NAD+ synthetase [Streptomyces violaceusniger Tu 4113] gi|306886552|gb|EFN17555.1| NAD+ synthetase [Streptomyces violaceusniger Tu 4113] Length = 584 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 205/592 (34%), Positives = 308/592 (52%), Gaps = 44/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+ GN + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLDGNTESILHWTRHSAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL---------NSVVILDAGNII 109 F++A +A+ +L + G G +VVG+ + + N+ +L G + Sbjct: 61 FVEASRAALHSLAERLNAEGLGELPVVVGYLDRSERARRYGQPAGSPQNAGAVLHRGTVA 120 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G + + I + + ICED+W++ GA Sbjct: 121 LTFAKHHLPNYGVFDEFRYFVPGDTLPMVRVHGIDIALAICEDLWQDGGRVPASCSAGAG 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY K R ++V + Y+ +GGQDEL+FDG S D ++ Sbjct: 181 LLLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDGEV 240 Query: 230 AFQMKHFSE-------------QNFMTEWHYDQQLSQWNYMSDDSASTMYIP-------- 268 + F+E + + E D L + Y P Sbjct: 241 IARAPQFAEGCVLLDLELPAADPDSVPEGVVDDGLRIDHVTLSADPLPGYEPELAGGEAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y A V+ LR Y KN F V+IGLSGGIDSAL AA+A DA+G +NV + +P Sbjct: 301 RLGDDEEVYTALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAALACDAVGAQNVYGVAMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 +Y+S S+ DA A+ G + + I + + + + + +G+ EN+QSR+R Sbjct: 361 SRYSSEHSVADATELARRTGLNFRTVSIAPMFDAYMDSL------QLTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++ GY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTTLMAISNQEGHIVLAPGNKSELACGYSTLYGDSVGAYGPIKDVYKTSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-N 506 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ + Sbjct: 475 AEERGQTP---PIPENSISKPPSAELRPGQVDTDSLPDYEVLDRILELYVDRDQGRKDIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 Y+D V + L+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 532 AAGYDDPLVTRILRLVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWRER 583 >gi|158313601|ref|YP_001506109.1| NAD+ synthetase [Frankia sp. EAN1pec] gi|158109006|gb|ABW11203.1| NAD+ synthetase [Frankia sp. EAN1pec] Length = 601 Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 215/608 (35%), Positives = 319/608 (52%), Gaps = 63/608 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ++ VGD+ GN ++A + L++F E+ ++GYP EDLV ++S Sbjct: 1 MAQLRIALAQVDTTVGDLDGNAELVSSWTKQALARSAHLVVFGEMTLTGYPAEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-------------PRQDQEGVLNSVVILDA 105 F+ A ++A++ L + GAG +VVG+ P + + N V +L Sbjct: 61 FVAASAAALERLAVRLAEEGAGEIAVVVGYLDASPTPAPAVGRPAGEPQ---NCVAVLWQ 117 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 G + A K +LPNY F E R F+ G + + +G+ +CED+W+ ++ Sbjct: 118 GRVAARSAKHHLPNYGVFDEFRYFVPGTTFPVFRLHGVDVGLTVCEDLWQEGGPVAVARE 177 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 G L +N SPY K R E+ + + YVN VGGQDEL+FDG S D Sbjct: 178 VGVGLLLCINGSPYEQGKSYHRDELCARRAREAGATLAYVNLVGGQDELVFDGDSLVVDA 237 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQ--------QLSQWNYMSDDSASTMYI--------PL 269 ++ + F+E + + + + +TM + PL Sbjct: 238 DGEVLARAPVFAETLLTVDLDLPEGAGTGVGPETGPDGPVDAGDGTTMAVSRVVLAADPL 297 Query: 270 QEEE------AD--------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA 315 E AD Y A V RDYV+KN F V +GLSGGIDSAL A IAVDA Sbjct: 298 PAWEPRPATVADRPDPAGELYAAVVTGTRDYVRKNGFRSVALGLSGGIDSALVATIAVDA 357 Query: 316 LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS 375 LG + V T+ +P ++S SL+DAA A ++ V+PI V F + ++ Sbjct: 358 LGPDAVHTVAMPSAHSSQGSLDDAAELAHRQRTRHSVVPIEPTVAAFHAALAAAGGL--H 415 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 G+ AEN+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GGF P+KD+ KT Sbjct: 416 GLAAENLQARVRGTLLMALSNEHGHLVLTTGNKSELATGFSTLYGDSAGGFAPIKDVSKT 475 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKR 495 V+ LA WRN+ + G P IP I+ K PSAEL P Q D + LP Y +LD ++ Sbjct: 476 NVWVLARWRNARAVARGEVP---PIPEEIIVKPPSAELAPGQLDSDRLPDYSVLDAVLDD 532 Query: 496 IVEN-----EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 V + E + +D D +R V+ +EYKRRQ P G K+T+K+FGRDR P Sbjct: 533 YVSHDLGRAELTAAGHDPATVDRVIRLVDL----AEYKRRQNPPGPKVTSKAFGRDRRLP 588 Query: 551 ISNKFRDH 558 I++++R+ Sbjct: 589 ITSRWRER 596 >gi|320011138|gb|ADW05988.1| NAD+ synthetase [Streptomyces flavogriseus ATCC 33331] Length = 586 Score = 349 bits (896), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 213/598 (35%), Positives = 309/598 (51%), Gaps = 58/598 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDATVGDLAGNSESILHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-PRQDQEGVL---------NSVVILDAGNI 108 F++A A+ L D G G +VVG+ R + V N+ +L G + Sbjct: 61 FVEASRRALRALAVRLADEGFGELPVVVGYLDRSEHPAVRYGQPAGSPRNAAAVLHRGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G S + I + + ICED+W++ + GA Sbjct: 121 ALNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQDGGRVPAARAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ GGQDEL+FDG S + Sbjct: 181 GLLLSVNASPYERDKDDTRLELVRRRAREAGCTTAYLAMTGGQDELVFDGDSIVVGKDGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQW------------NYMSDDSASTMYIP-------- 268 + + FSE + + ++ + + + Y P Sbjct: 241 VIARAPQFSEGTVILDLDLPAASAEAPSGVVADGLRIDHVVLSEEPLPAYEPELAGGYAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR Y KN F V+IGLSGGIDSAL A IA DALG +NV + +P Sbjct: 301 RLDDDEELYSALVVGLRAYAAKNGFSSVLIGLSGGIDSALVAVIACDALGADNVYGLSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + +PI + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTVPIEPMFDAYMDSLGL------TGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTMLMAVSNQEGQIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND 507 G P IP + + K PSAELRP Q D +SLP Y +LD I+ E +++ D Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPDQVDTDSLPDYDVLDRIL-------ELYVDRD 524 Query: 508 Q--------EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 Q ++D V ++ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 525 QGRDAIVAAGFDDALVTRTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 582 >gi|318059140|ref|ZP_07977863.1| NH(3)-dependent NAD(+) synthetase [Streptomyces sp. SA3_actG] gi|318075637|ref|ZP_07982969.1| NH(3)-dependent NAD(+) synthetase [Streptomyces sp. SA3_actF] Length = 586 Score = 349 bits (895), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 212/598 (35%), Positives = 315/598 (52%), Gaps = 56/598 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VVGD+ N + A +G L+ F E+ ++GYP EDL + + Sbjct: 1 MPQLRLALNQIDAVVGDLDANADSVVQWTRHAAERGAHLVAFPEMVLTGYPVEDLALRST 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVGF-----PRQDQEGV-----LNSVVILDAGNI 108 F++A +A+ L + D GG +V+G+ Q + G+ N+ +L G + Sbjct: 61 FVEASRAALHALAARLVDEGLGGLPVVLGYLDRSETDQHRYGMPAGSPRNAAAVLHQGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 VLRFAKHHLPNYGVFDEFRYFVPGDTLPVVRVHGVDVALAICEDLWQDGGRVPATRAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R ++V + YV GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYVAMSGGQDELVFDGDSIVVDKDGS 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM------------------YIP-- 268 + + F+E F+ + L +++ A T+ Y P Sbjct: 241 VITRAPQFTEGCFLLD------LDLPPAPAEEPAGTVHDGLRIEHVTISPTPLPAYEPEY 294 Query: 269 -------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 L++ E Y A V LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV Sbjct: 295 TGEYAERLEDAEEVYGALVTGLRAYVRKNGFRSVLIGLSGGIDSALTAAIACDAIGAENV 354 Query: 322 QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + +P KY+S S +DAA A G Y PI + + + + + +G+ EN Sbjct: 355 YGVSMPSKYSSEHSKDDAADLAARTGLHYRSAPIAAMFDAYMAALGF------TGLAEEN 408 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +Q+R+RG LM +SN ++L NKSE++VGY TLYGD G + P+KD+YK+QVF LA Sbjct: 409 LQARLRGTTLMGISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSQVFALA 468 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 WRN G P IP + + K PSAELRP Q D +SLP Y +LD I+ V+ ++ Sbjct: 469 RWRNQAAEQRGETP---PIPENTIAKPPSAELRPGQVDTDSLPDYDVLDRILAMYVDRDQ 525 Query: 502 -SFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 S ++ V V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R++ Sbjct: 526 GSDAIVAAGFDPAVVARVLRMVDNAEYKRRQYPPGTKISAKGFGKDRRMPITNRWREN 583 >gi|312878522|ref|ZP_07738403.1| NAD+ synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311794700|gb|EFR11148.1| NAD+ synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 540 Score = 349 bits (895), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 214/568 (37%), Positives = 317/568 (55%), Gaps = 46/568 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K + + + +++F EL I GYPP+DL+F+K FI Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIEIIK--SHRDAKILIFPELSICGYPPKDLLFQKDFID 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AID + + D + ++VG P + + NS +I G I + K LP+Y Sbjct: 59 AIDKAIDQIAKEVED--SYVIVGSPTKSHHVSKLFNSAIIFYRGKIEKMIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R F + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFTPSPTREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELFQKGAKVFIN 176 Query: 174 LNASPYYHNKLK-KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ +R +++ + +P+IYVNQVGG DELIFDG S + +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVLSSKGRLIAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E + + + D S A VL +RDY +K Sbjct: 237 AKEFEEDILEIELEKIDNMPEVDIHEDISWIK------------KALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALG+ENV + +P +Y+S SL+DA A LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLATEALGRENVLGVAMPSRYSSEHSLKDAQKLASNLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 V I + F S + F E + + ENIQ+RIRGNILM +SN ++LTT NKS Sbjct: 345 VYSIEE---PFKSYLKMFNGSEVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKS 401 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K P Sbjct: 402 ELAVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPP 452 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE--YNDETVRYVEHLLYGSEY 527 SAELRP+Q DQ++LPPY +LD I+ +E+++S IN E Y + V V ++ +EY Sbjct: 453 SAELRPNQKDQDTLPPYEVLDPILVAYIEDQKS-INEIVEMGYPKDLVLKVIKMVERAEY 511 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KR+QA G K+T+K+FG R PI ++ Sbjct: 512 KRKQAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|51246771|ref|YP_066655.1| glutamine-dependent NAD(+) synthetase [Desulfotalea psychrophila LSv54] gi|50877808|emb|CAG37648.1| probable glutamine-dependent NAD(+) synthetase [Desulfotalea psychrophila LSv54] Length = 551 Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 213/578 (36%), Positives = 318/578 (55%), Gaps = 52/578 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + Q NP++GD A N K +A G L++F EL +SGYPP DL+ + FI+ Sbjct: 1 MKIGLVQYNPLIGDFAHNCKKIVSWATKAQEAGCSLVVFPELAVSGYPPLDLLERSVFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEG--VLNSVVILDAGNIIAVRDKINLP 118 +A+D L + GI V F R+ + G + NSV++ G ++ R K LP Sbjct: 61 EHQAALDRLLGEL----PGIDVMFGAVEKREGKGGRALYNSVLVAREGRVVYRRRKQLLP 116 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKN----------SNICKHLKK 165 Y F E R F G + + F + G+ ICED+W + S + + ++ Sbjct: 117 TYDVFDESRYFEPGRAEESEKFYTLGGTTFGVTICEDVWHDEVGHYALSPVSGMVESCRE 176 Query: 166 QGAEF--LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 + + +++ASP+ K +R I + P +Y NQVGGQD LIFDG S Sbjct: 177 KNISLAAVINISASPFQRGKEAQRRRIFAESALALGAPFLYCNQVGGQDSLIFDGGSLAI 236 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 + ++ + +E + YD + + + AS EE+ Y A VL + Sbjct: 237 SERGEVLGEAASCAEDLLV----YDTESQECSAPPRPLASP-------EESVYQALVLGV 285 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY++K F V++GLSGGIDSAL AAIAVDALG ENVQ + LP +Y+S S +DA + A Sbjct: 286 RDYIRKCGFTSVVLGLSGGIDSALTAAIAVDALGAENVQGVALPSQYSSGGSYDDAQSLA 345 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + LGC + ++PI DL F S ++ + +N+Q+RIRGN+LMALSN +LL Sbjct: 346 ENLGCDFKMIPIKDLFYAFESSLAPIFTGLEEDVTEQNLQARIRGNLLMALSNKFNKLLL 405 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GG + D+ K V+ L+ + N HG E+IP + Sbjct: 406 TTGNKSEMAVGYCTLYGDMNGGLAVISDVPKQLVYALSRYVNRHG---------EIIPEN 456 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVEN----EESFINNDQEYNDETVRYVE 519 + K PSAEL+P Q DQ+ LP Y +LD +++ +E+ EE + ++ + V+ V Sbjct: 457 TISKPPSAELKPDQCDQDDLPDYDVLDRVLELHLEDGCGCEEIVAHG---FDRQMVQDVL 513 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + +EYKR+QA VG K+T+K+FG R +P + FR+ Sbjct: 514 RRVRLNEYKRKQAAVGLKVTSKAFGYGRRFPNAQNFRN 551 >gi|288920335|ref|ZP_06414647.1| NAD+ synthetase [Frankia sp. EUN1f] gi|288348283|gb|EFC82548.1| NAD+ synthetase [Frankia sp. EUN1f] Length = 597 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 217/613 (35%), Positives = 315/613 (51%), Gaps = 69/613 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ++ VGD+ N ++A QG L+ F E+ ++GYP EDLV ++S Sbjct: 1 MAQLRIALAQVDTTVGDLDANADLVSSWTKQALTQGAHLVAFGEMTLTGYPAEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF-------------PRQDQEGVLNSVVILDA 105 F+ A ++ ++ L + + G G +VVG+ P + + N V +L Sbjct: 61 FVAASAATLERLAARLDEEGTGSVAVVVGYLDASPTPAPAVGRPAGEPQ---NCVAVLWQ 117 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 G + A K +LPNY F E R F+ G + + +G+ +CED+W+ +K Sbjct: 118 GRVAARSAKHHLPNYGVFDEFRYFVPGTTFPVFRLHGVDVGLTVCEDLWQAGGPVAVARK 177 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 G L +N SPY K R E+ + + Y+N VGGQDEL+FDG S D Sbjct: 178 VGVGLLLCINGSPYEQGKSFHRDELCARRAREADATLAYINLVGGQDELVFDGDSLVVDP 237 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI------------------ 267 + + F E+ +T D L N + T + Sbjct: 238 TGAVLARAPVF-EETLLT---VDLDLPARNTPGTATGMTGQVAAGDGTMMEVSHIVLAGE 293 Query: 268 PLQEEEAD--------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 PL E Y A V RDYV+KN F V +GLSGGIDSAL A IAV Sbjct: 294 PLPAWEPRPHQIAQRPDPVGELYAAVVTGTRDYVRKNGFRSVALGLSGGIDSALVATIAV 353 Query: 314 DALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 DALG E V T+ +P ++S SL+DAA A+ G ++ V+PI V F + ++ Sbjct: 354 DALGGEAVHTVAMPSAHSSQGSLDDAAELARRQGTQHSVVPIEPTVAAFHAALAAAGGL- 412 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 G+ AEN+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GGF P+KD+ Sbjct: 413 -HGLAAENLQARVRGTLLMALSNEHGHLVLTTGNKSELATGFSTLYGDSAGGFAPIKDVS 471 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDII 493 KT V+ L+ WRN+ G P IP I+ K PSAEL P Q D + LP Y LD ++ Sbjct: 472 KTMVWALSRWRNAQATARGEVP---PIPEEIIVKPPSAELAPGQLDSDRLPDYTELDAVL 528 Query: 494 KRIVEN-----EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRL 548 V + E + +D D +R V+ +EYKRRQ P G K+T+K+FGRDR Sbjct: 529 DDYVSHDLGRAELTAAGHDPATVDRVIRLVDL----AEYKRRQNPPGPKVTSKAFGRDRR 584 Query: 549 YPISNKFRDHISE 561 PI++++R+ E Sbjct: 585 LPITSRWRERERE 597 >gi|312792463|ref|YP_004025386.1| nad+ synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179603|gb|ADQ39773.1| NAD+ synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 540 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 213/568 (37%), Positives = 315/568 (55%), Gaps = 46/568 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K + + + +++F EL I GYPP+DL+F+K FI Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIEIIK--SHRDAKILIFPELSICGYPPKDLLFQKDFIA 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AID + + D + ++VG P + + NS +I G I + K LP+Y Sbjct: 59 AIDKAIDQIAKEVED--SYVIVGSPTKSHHVSKLFNSAIIFYRGKIEKMIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R F + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFTPSPTREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELFQKGAKVFIN 176 Query: 174 LNASPYYHNKLK-KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ +R +++ + +P+IYVNQ+GG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQIGGNDELIFDGNSVVLSSDGRLVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E + + + D S A VL +RDY +K Sbjct: 237 AKEFEEDILEIELEKIDNMPEVDIHEDISWIK------------KALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALG+ENV + +P +Y+S SL+DA A LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLATEALGRENVLGVAMPSRYSSEHSLKDAQKLASNLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 V I + F S + F E + + ENIQ+RIRGNILM +SN ++LTT NKS Sbjct: 345 VYSIEE---PFKSYLKMFNGSEVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKS 401 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K P Sbjct: 402 ELAVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPP 452 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE--YNDETVRYVEHLLYGSEY 527 SAELRP+Q DQ++LPPY +LD I+ +E ++S IN E Y + V V ++ +EY Sbjct: 453 SAELRPNQKDQDTLPPYEVLDPILVAYIEEQKS-INEIVEMGYPKDLVLKVIKMVERAEY 511 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KR+QA G K+T+K+FG R PI ++ Sbjct: 512 KRKQAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|54293718|ref|YP_126133.1| hypothetical protein lpl0771 [Legionella pneumophila str. Lens] gi|53753550|emb|CAH15005.1| hypothetical protein lpl0771 [Legionella pneumophila str. Lens] Length = 536 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 221/566 (39%), Positives = 301/566 (53%), Gaps = 37/566 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRA--REEANRQGMDLILFTELFISGYPPEDLVF 58 M L + +AQ+NP VG I N K +AN D+I+F EL +SGYP EDL+F Sbjct: 1 MNAPLTVLMAQINPTVGAIDANTNKILDVIKNHQANH---DVIIFPELTLSGYPAEDLLF 57 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +K + + ++ T D ++VG P N I G I K LP Sbjct: 58 RKEYHDKIMLNLQDIQDTTKD--CYVIVGHPMIHIGDCYNGFSIFYQGEKIRAYHKQKLP 115 Query: 119 NYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 NY F E R F G DP V ++ +LG ICED+W+ + L L SLNA Sbjct: 116 NYGVFDEARYFTPG-KKDPCVLSIKNHKLGFCICEDLWQKGPV-DDLLDSDISILLSLNA 173 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SP+ + K + R E++ + IIYVNQ+GGQD+L+FDG S D Q + F Sbjct: 174 SPFDYRKYQLREELLRSYAKR-GVSIIYVNQIGGQDDLLFDGQSLAMDNQGIIRALAPAF 232 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E L N + ++ L +E Y A V RDYV+KNNF V+ Sbjct: 233 EES-----------LCTVNIDGNKIDGSITPYLDKEALIYKALVCGTRDYVRKNNFPGVL 281 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL IAVDALG E V +++P +YT+ S EDA L + ++PI Sbjct: 282 LGLSGGIDSALTLTIAVDALGAEQVHAVLMPSQYTASISNEDALEQLSNLKVAHSIIPIE 341 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + ++ P ENIQ+RIRG +LMALSN + M+LTTSNKSE +VGY Sbjct: 342 PMFQSMIESLHPVFKDLPPDTTEENIQARIRGMLLMALSNKTGKMVLTTSNKSETAVGYT 401 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF LKD+ KTQV++L +RN ++ VIP ++ + PSAEL+P+ Sbjct: 402 TLYGDMAGGFAVLKDVLKTQVYELVRYRNK---------ISLVIPERVITRPPSAELKPN 452 Query: 477 QTDQESLPPYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 QTDQ+SLP Y LD II +E S I + + + V + L+ +EYKRRQA Sbjct: 453 QTDQDSLPEYGELDAIIMAYMEQNLSPSEIIA--KGFKPQVVNKIIQLIKRNEYKRRQAA 510 Query: 534 VGTKITAKSFGRDRLYPISNKFRDHI 559 G KI+ +FG+D +PI+N F I Sbjct: 511 PGIKISNLAFGKDWRFPITNGFNQCI 536 >gi|312891312|ref|ZP_07750831.1| NH(3)-dependent NAD(+) synthetase [Mucilaginibacter paludis DSM 18603] gi|311296272|gb|EFQ73422.1| NH(3)-dependent NAD(+) synthetase [Mucilaginibacter paludis DSM 18603] Length = 554 Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 206/561 (36%), Positives = 304/561 (54%), Gaps = 21/561 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA+AQLN VG+ N K E A RQG DL++F+EL + GYP D FI Sbjct: 3 INIALAQLNYHVGNFESNTKKIIGTIETARRQGADLVVFSELCVCGYPARDFFEFTEFIG 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYSE 122 C A + + D I + P ++G + NS ++ G + AV +K LPNY Sbjct: 63 LCEEAAQQIAAVCTDIACIIGLPTPNLKEQGKDLFNSAYFIENGKVKAVVNKALLPNYDV 122 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-------SNICKHLKKQGAEFLFSLN 175 F E R F + I F+ R+ + ICED+W + L +Q + + ++ Sbjct: 123 FDEYRYFEPETDFNCIDFKGHRIALTICEDLWNTIENPLYITRPMDKLIEQQPDVMINIA 182 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASP+ +N K+R +I++ HLP+ YVNQVG Q ELIFDG S FD + + ++ + Sbjct: 183 ASPFAYNHDKERIDILSNNSKQYHLPLFYVNQVGAQTELIFDGGSLVFDDKGDMLDELPY 242 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F E + + D+ + + + + + E + +L +RDY K+ F + Sbjct: 243 FKEH--IAYYQLDKAGDKAVISFNHTPTVKPEYTGDIEQIHQGLLLGIRDYFYKSGFTRA 300 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+GLSGGIDSA+ A+A +ALG +NV ++LP +++S S+ DA LGCK + + I Sbjct: 301 ILGLSGGIDSAVVCALAAEALGPDNVMAVLLPSRFSSDHSVTDADDLVTNLGCKSETIAI 360 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 ++ F + + Q P I ENIQSR R +LMA+ N +LL TSNKSE +VGY Sbjct: 361 KNITEAFETALHPQFQNLPFNIAEENIQSRSRAVLLMAMCNKFGYILLNTSNKSEAAVGY 420 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 GTLYGDM GG + L D+YKTQV+QLA++ N E+IP + + K PSAELRP Sbjct: 421 GTLYGDMCGGISVLGDVYKTQVYQLANYINRE---------REIIPINSIVKPPSAELRP 471 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 Q D +SLP Y ILD I+ +EN +S Y+++ VR + L+ +E+KR Q P Sbjct: 472 GQKDSDSLPDYDILDTILLEYIENRKSSKEIISMGYDEQVVRRIIKLVNTAEHKRYQTPP 531 Query: 535 GTKITAKSFGRDRLYPISNKF 555 +++ K+FG R PI K+ Sbjct: 532 ILRVSPKAFGMGRRMPIVGKY 552 >gi|33862002|ref|NP_893563.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640370|emb|CAE19905.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 565 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 210/570 (36%), Positives = 311/570 (54%), Gaps = 38/570 (6%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSS 68 IAQLNP+VGD+ GN K +A D++L EL + GYP +DL+ KK+ I+ S Sbjct: 5 IAQLNPIVGDLEGNAKKILTETGKAYSNCADMVLTPELSLWGYPAKDLLLKKNLIERQYS 64 Query: 69 AIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNYSE 122 +D L G + VG + + + NS+V+++ G + KI LP Y Sbjct: 65 ILDQLSISIFKKYGNLSVAVGIAEKIDDSFFPNLYNSIVLIERGKWKTIARKIILPTYEV 124 Query: 123 FHEKRTFIS----GYSNDPIVFRDIRLGILICEDIWKNSNI----------CKHLKKQGA 168 F EKR F S + I + +LGI ICED+W N NI LK + Sbjct: 125 FDEKRYFRSEQRVSVISKTIKNKTYKLGITICEDLWVNENIEGRGIHKKNPIIDLKSKKI 184 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + L +L+ASPY K R++I + ++ +P+IYVNQ+G D+LIFDG SF + Sbjct: 185 DLLLNLSASPYTFKKFNLRNKISSFAAKYLQVPLIYVNQIGANDDLIFDGNSFIMNKNGS 244 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 Q+K FSE + W ++ L+ + D+ S+ E + ++A VL ++DY + Sbjct: 245 KIKQLKSFSEDT--SSWDINENLN----LVDEKISS------EISSVFDALVLGVKDYAK 292 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K F +IGLSGGIDSAL + IA ALG E + + +P K++S S DA L Sbjct: 293 KCGFRSALIGLSGGIDSALVSVIATAALGSEKIFCVSMPSKWSSEHSKIDAKDLVARLNI 352 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + + I ++++ F + L + GI +NIQSRIRG +LMAL+N +LL+T NK Sbjct: 353 NLNTISIENIMSSFEKSFIESLNFKTEGITNQNIQSRIRGTLLMALANQENHLLLSTGNK 412 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-----HGITSGLGPLTEVIPPS 463 SE++VGY TLYGDM+GG + + DLYKT VF+L W +S H L ++I Sbjct: 413 SELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCRWLDSKDSIEHRKAYKLDTKVKIIGDQ 472 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLL 522 I K PSAEL P Q D +SLPPY +LD I+K I+E ++ +Q+ + E + + L+ Sbjct: 473 ICNKPPSAELGPDQLDTDSLPPYSLLDKILKGIIEEKKDLQLLEQDGHTKEQILKIITLI 532 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 +E+KR+QAP K++++S G D PI+ Sbjct: 533 KKAEFKRKQAPPILKLSSQSLGSDWRVPIA 562 >gi|229820340|ref|YP_002881866.1| NAD+ synthetase [Beutenbergia cavernae DSM 12333] gi|229566253|gb|ACQ80104.1| NAD+ synthetase [Beutenbergia cavernae DSM 12333] Length = 547 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 214/573 (37%), Positives = 316/573 (55%), Gaps = 42/573 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQ+N VGD+ GN R A G DL+ F E+ ++GYP EDL + S Sbjct: 1 MSTLRLALAQVNSAVGDLEGNAQTVLRLALAAQAAGADLVAFPEMVLTGYPIEDLALRGS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINL 117 F +A ++ L + D GAG +VVG + +G N+ +L G ++A K +L Sbjct: 61 FRRAVAAQERRLAAALVDEGAGDVHVVVGSLSEAADGRPTNTAAVLRDGRVVARYTKHHL 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 PNY F E R F SG +DP+V D+ R+G+ ICEDIW++ L G + L + Sbjct: 121 PNYGVFDEYRIFASG--SDPVVV-DVAGHRVGLAICEDIWRDGGTVAQLASPGVDLLLVI 177 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 N SPY K R + + + + P+ YVN +GGQD+L+FDG SF D + + Sbjct: 178 NGSPYERGKGYLRSRLAAERAAELSAPVAYVNLIGGQDDLVFDGGSFVLDVDGTVVARSP 237 Query: 235 HFSEQNFMT----EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 F E + +Q + DD+A Y+A VL LRDY +KN Sbjct: 238 TFDEDLLLLDLPGAGDPPEQPGHVARVDDDTAQM-----------YDAVVLGLRDYARKN 286 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F V++G+SGGIDSAL A +A DA+G ++V + +P Y+S SL DA A+ G Y Sbjct: 287 GFTDVVLGISGGIDSALTATVACDAVGADHVLGVAMPSAYSSEHSLADARELAERTGLTY 346 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 PI V+ F + G+ AEN+Q+R+RG +LMA+SN +++ NKSE Sbjct: 347 REQPIEPFVDAFQGELRL------DGVPAENLQARVRGVVLMAISNAEGHLVIAPGNKSE 400 Query: 411 ISVGYGTLYGDMS-GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 ++VGY T+Y S GGF PLKD+ KT+V++LA +RN+ +G P IP S + K P Sbjct: 401 LAVGYSTIYDAGSIGGFAPLKDVLKTRVWELARYRNARARAAGETP---PIPESSITKPP 457 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEHLLYGS 525 SAELRP Q D +SLP Y +LDD++ VE + D+ + + V V L+ + Sbjct: 458 SAELRPGQKDSDSLPDYELLDDVLDAYVERA---LGRDELEASGFAPDVVDLVLRLVDRA 514 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 E+KRRQ P+G K+T+ +FGRDR P+++++R+ Sbjct: 515 EWKRRQYPLGPKVTSLAFGRDRRLPVTSRWREE 547 >gi|116626533|ref|YP_828689.1| NH(3)-dependent NAD(+) synthetase [Candidatus Solibacter usitatus Ellin6076] gi|116229695|gb|ABJ88404.1| NH(3)-dependent NAD(+) synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 544 Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 215/563 (38%), Positives = 309/563 (54%), Gaps = 39/563 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q+NP GD+ GN + RA A QG DL+ EL + GY P DL+ + F++ Sbjct: 1 MRLALLQINPTAGDLEGNSSLIIRAARSAEAQGADLMATPELALMGYLPRDLLMNQGFVR 60 Query: 65 ACSSAIDTLKSDTHDGG---AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + D G+ P + NS V+L G++ K LP Y Sbjct: 61 RGCERLSQIAKELKDAPPLLVGVATPNPSDVGRPLYNSAVLLQNGSVGPAFHKSLLPTYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH----------LKKQGAEFL 171 F E R F + + ++LGI ICED+W + + + L + GA+ + Sbjct: 121 VFDEDRYFEPYHGAQILELNGVKLGISICEDVWNDRDFWQRRRYHQDPIEELAQAGAQAI 180 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +L+ASP+ K + R ++ LP+ VNQVG D+LIFDG S FD Q +L Sbjct: 181 LNLSASPFSVGKQELRERMLGHMAQKYGLPVTIVNQVGANDDLIFDGRSAAFDAQGRLFA 240 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + K F E + D S+ DD + P E +NA VL +RDY +K Sbjct: 241 RAKGFQEDVLLV----DLLGSEGTVAPDD-----FTP---EAEIWNALVLGVRDYARKTR 288 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV++GLSGGIDSAL AAIA DA+G ENV +M+P Y+S S++D+ A+ LG + Sbjct: 289 FRKVLLGLSGGIDSALTAAIAADAMGPENVLGVMMPSVYSSQGSVDDSVELARNLGIQTM 348 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 LPI ++ + +++ + ENIQSRIRGN+LMALSN ++LLTT NKSE+ Sbjct: 349 KLPIGGIMKTYDGVLADAFAGLKPDVTEENIQSRIRGNLLMALSNKFGSLLLTTGNKSEM 408 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 SVGY TLYGDM+GG + DL K V++++ WRN G IP S + K PSA Sbjct: 409 SVGYCTLYGDMNGGLAVIADLPKMMVYRVSRWRNLRG---------PAIPESTITKPPSA 459 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLLYGSEYK 528 ELRP QTDQ+SLPPY +LD+I++ VE + E I Q Y+++TVR V L+ +E+K Sbjct: 460 ELRPDQTDQDSLPPYELLDEILELHVEQCQSAEEIIA--QGYDEQTVRRVLRLVRIAEFK 517 Query: 529 RRQAPVGTKITAKSFGRDRLYPI 551 R+QA K+T+++FG PI Sbjct: 518 RKQAAPVLKVTSRAFGTGWRMPI 540 >gi|218885553|ref|YP_002434874.1| NAD+ synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756507|gb|ACL07406.1| NAD+ synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 556 Score = 346 bits (887), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 206/573 (35%), Positives = 314/573 (54%), Gaps = 42/573 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA+ QLN VVGD+AGN A+ A +A +G L + EL I GYPP DL+ + F+ Sbjct: 1 MNIALLQLNMVVGDVAGNAARIEAAVRDAAARGAGLCVTPELAICGYPPRDLLLRSDFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN----SVVILDAGNIIAVRDKINLPNY 120 C A++ L D ++VG P + V N + V+L G + K+ LP Y Sbjct: 61 GCRKALEALAQRLKDAPP-VLVGAPVPNPTPVGNRLHNAAVLLHEGTVTVATRKVLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH-----------LKKQGAE 169 F E+R F G + + RLG+ +CEDIW + + L G + Sbjct: 120 DVFDERRYFEPGVNCGAVTVAGWRLGVTVCEDIWNDKTFWQEHRQYETDPVADLGLAGVD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L+ASP+ K R +++ S +P++Y NQVGG D+L+F G S FD L Sbjct: 180 AIINLSASPFTLGKQAVRERMLSRVASRYRVPVLYANQVGGNDDLLFAGKSVAFDAVGHL 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + + F E + + ++ + S P + E + A V+ RDY +K Sbjct: 240 IARGRPFEEDTVLVD------------VAAGTGSICPDPAEPEAQVWQALVMGTRDYARK 287 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F ++GLSGG+DSAL AA+A +ALG ENV+ +++P ++S S+ DA A A+ LG Sbjct: 288 CGFTGAVLGLSGGVDSALVAAVAAEALGPENVRVLLMPSPHSSEGSVTDALAVARNLGLS 347 Query: 350 YD---VLPIHDLVNHFFSLMSQF---LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 D +PI ++ F + ++ L + ENIQSRIRGN+LMA+SN S A+LL Sbjct: 348 ADAVHTVPIGPMMEGFDAALAPVFGALGRTARDVTEENIQSRIRGNLLMAVSNKSGAVLL 407 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY T+YGDM+GG + D+ KT V+++ WRN+ +G ++IP + Sbjct: 408 TTGNKSELAVGYCTIYGDMAGGLAVIADVPKTLVYRVCRWRNAQ---AGY----DLIPTA 460 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIK-RIVENEESFINNDQEYNDETVRYVEHLL 522 IL+K+PSAELRP Q D +SLPPY +LD I++ +V + + + ++ V V L+ Sbjct: 461 ILDKAPSAELRPDQKDTDSLPPYDVLDAILECCVVHHMDRNAVVAEGFDPAVVDNVLRLV 520 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 SE+KRRQA G K+T ++FG P++++ Sbjct: 521 RISEFKRRQAAPGLKVTDRAFGTGWRMPVASRL 553 >gi|116619755|ref|YP_821911.1| NH(3)-dependent NAD(+) synthetase [Candidatus Solibacter usitatus Ellin6076] gi|116222917|gb|ABJ81626.1| NH(3)-dependent NAD(+) synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 544 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 214/563 (38%), Positives = 308/563 (54%), Gaps = 39/563 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q+NP GD+ GN + RA A QG DL+ EL + GY P DL+ + F++ Sbjct: 1 MRLALLQINPTAGDLEGNSSLIVRAARSAEAQGADLMATPELALMGYLPRDLLMNQGFVR 60 Query: 65 ACSSAIDTLKSDTHDGG---AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + D G+ P + NS V+L G++ K LP Y Sbjct: 61 RGCEKLSQIAKELKDAPPLLVGVATPNPSDVGRPLYNSAVLLQNGSVGPAFHKSLLPTYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH----------LKKQGAEFL 171 F E R F + + ++LGI ICED+W + + + L + GA+ + Sbjct: 121 VFDEDRYFEPYHGAQILELNGVKLGISICEDVWNDRDFWQRRRYHQDPIEELAQAGAQAI 180 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +L+ASP+ K + R ++ LP+ VNQVG D+LIFDG S FD Q +L Sbjct: 181 LNLSASPFSVGKQELRERMLGHMARKYGLPVTIVNQVGANDDLIFDGRSAAFDAQGRLFA 240 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + K F E + D + DD + P E +NA VL +RDY +K Sbjct: 241 RAKGFQEDVLLV----DLLGGEGTVAPDD-----FTP---EAEIWNALVLGVRDYARKTR 288 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV++GLSGGIDSAL AAIA DA+G ENV +M+P Y+S S++D+ A+ LG + Sbjct: 289 FRKVLLGLSGGIDSALTAAIAADAMGPENVLGVMMPSVYSSQGSVDDSVELARNLGIQTM 348 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 LPI ++ + +++ + ENIQSRIRGN+LMALSN ++LLTT NKSE+ Sbjct: 349 KLPIGGIMKTYDGVLADAFAGLKQDVTEENIQSRIRGNLLMALSNKFGSLLLTTGNKSEM 408 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 SVGY TLYGDM+GG + DL K V++++ WRN G IP S + K PSA Sbjct: 409 SVGYCTLYGDMNGGLAVIADLPKMMVYRVSRWRNLRG---------PAIPESTITKPPSA 459 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLLYGSEYK 528 ELRP QTDQ+SLPPY +LD+I++ VE + E I Q Y+++TVR V L+ +E+K Sbjct: 460 ELRPDQTDQDSLPPYELLDEILELHVEQCQSAEEIIA--QGYDEQTVRRVLRLVRIAEFK 517 Query: 529 RRQAPVGTKITAKSFGRDRLYPI 551 R+QA K+T+++FG PI Sbjct: 518 RKQAAPVLKVTSRAFGTGWRMPI 540 >gi|254468201|ref|ZP_05081607.1| NAD+ synthetase [beta proteobacterium KB13] gi|207087011|gb|EDZ64294.1| NAD+ synthetase [beta proteobacterium KB13] Length = 524 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 202/559 (36%), Positives = 308/559 (55%), Gaps = 45/559 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q NPV+GDI N +++ D+ + EL + GYPP+DL+F K FI+ Sbjct: 1 MKVCLIQSNPVMGDIKNNF---NWIKKQIISNDADIFIAPELALIGYPPDDLLFDKEFIK 57 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + H +++G + + NS I+ NI + K LPNY F Sbjct: 58 KQEQAFNEFQP--HLKNKLLIIGGVHVKKNKIFNSAFIISQNNI-KHQHKQCLPNYGVFD 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + ++ ++ ILICED W + ++ K + + +F +NASP+ +KL Sbjct: 115 EKRYFSPGDHQKIVTYKKKKILILICEDFW-DKDLEKKYQDKQIDFCVVINASPFEIDKL 173 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R + +IY+N VGGQD+++FDG SF + + Q+ HF + + Sbjct: 174 NLRINRAKKINRKIKSNLIYLNMVGGQDDVVFDGGSFTLNKNNNICTQLDHFKCHTKLVK 233 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 +++ Q L EE+ NAC+L +DY++KN + +GLSGGID Sbjct: 234 EFSPEKVPQ--------------SLSIEESVLNACILGTKDYIKKNKIKNIFLGLSGGID 279 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A IA A+ KEN+ IM+ KYTS S++DA AK LG + + L+N Sbjct: 280 SALVAYIASKAINKENINCIMMRSKYTSKISIDDAKNLAKNLGVNFIDKNLSSLINQINL 339 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + I ENIQ+R RG ILMAL+N ++L+TSNKSE +VGY TLYGDM G Sbjct: 340 NLKDDFKNLKQDITEENIQARSRGLILMALANKKNGVVLSTSNKSESAVGYSTLYGDMVG 399 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + P+KD+ KT +++++ + N++ ++IP I+ ++PSAEL+P+QTDQ+SLP Sbjct: 400 AYAPIKDIPKTLIYKISKFINAN---------EKIIPERIITRAPSAELKPNQTDQDSLP 450 Query: 485 PYPILDDIIKRIVENEESFINNDQEYND--------ETVRYVEHLLYGSEYKRRQAPVGT 536 Y LD II E FI+ Q ++ +TV+ + L+ SE+KRRQ+P G Sbjct: 451 AYEELDKII-------EFFIDEGQSVDEIISMGFKAQTVKKIVKLILRSEFKRRQSPPGP 503 Query: 537 KITAKSFGRDRLYPISNKF 555 KIT+K+FGR+R +PI+N F Sbjct: 504 KITSKAFGRERRFPITNNF 522 >gi|182415565|ref|YP_001820631.1| NAD+ synthetase [Opitutus terrae PB90-1] gi|177842779|gb|ACB77031.1| NAD+ synthetase [Opitutus terrae PB90-1] Length = 573 Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 209/576 (36%), Positives = 308/576 (53%), Gaps = 30/576 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ+NP VGD+A N A + QG +L+ F EL + GYPP DL+FK+ F++ Sbjct: 1 MRVGLAQINPTVGDLASNRRLILDAYQSLVAQGAELVAFPELAVCGYPPRDLLFKRRFVR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 C ++ + + G ++G ++ G N+ AG I+A K LP Y Sbjct: 61 DCEDSLQQIAAQI--GSVPALIGTVTRNTTGSGRPTYNAAAFCRAGQIVATARKCLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIW-----------KNSNICKHLKKQG 167 F E R F ++ PIV R+GI ICEDIW + ++ + L Q Sbjct: 119 DVFDEDRYFEP--ASAPIVVEHAGARIGITICEDIWTHPMISTRQLHRGADPVQQLAAQH 176 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +++ASP++ +K R ++ + +Y+N VGG DELIFDG S Sbjct: 177 CDLMVNVSASPWHFDKDNLRETLIADTARALGCATVYLNVVGGNDELIFDGRSLACTADG 236 Query: 228 QLAFQMKHFSEQNFMTEWHYDQ-QLSQWNYMSDDSASTMYIP-----LQEEEAD-YNACV 280 + ++ F + + + + + + +P + E AD ++A V Sbjct: 237 SVIEKLPAFQDALRVIDVPSTHVPPTARKAAAPAATLPARLPAATGCVASECADTFDALV 296 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L LRDY K+ F + +I LSGGIDSAL A IA ALG ENV + LP +S S +DA Sbjct: 297 LGLRDYAHKSGFKRALIALSGGIDSALVAVIATAALGAENVTGVSLPSAISSQHSRDDAR 356 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+ LG +++ + I + V ++++ + + ENIQ+RIRG I+MALSN A Sbjct: 357 QLAQNLGIRFETIAIAEPVAATEAVLADAFRGRTRDVTEENIQARIRGVIMMALSNKFGA 416 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LLTT NKSE++VGY TLYGDM+GG + DLYKTQV+ +A W N + LG E+I Sbjct: 417 LLLTTGNKSEMAVGYCTLYGDMAGGLAVISDLYKTQVYSVARWIN-QVYAARLGRTGEII 475 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVE 519 P S + K PSAELRP Q DQ+SLPPY +LD I++ VE S + Q + + V V Sbjct: 476 PASTITKPPSAELRPDQLDQDSLPPYDVLDAILRSYVEEGHSRRDIVAQGFAEAVVNDVV 535 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +EYKR+QA G KIT +FG R PI K+ Sbjct: 536 RKVDLNEYKRKQAAPGLKITPLAFGVGRRIPIVQKY 571 >gi|221069081|ref|ZP_03545186.1| NAD+ synthetase [Comamonas testosteroni KF-1] gi|220714104|gb|EED69472.1| NAD+ synthetase [Comamonas testosteroni KF-1] Length = 567 Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 218/577 (37%), Positives = 321/577 (55%), Gaps = 38/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ +AQLN +VGDI+GNI + R A A + DL++F+EL + GY P DL+ + SF+Q Sbjct: 2 LKVTLAQLNYMVGDISGNIRRMREAATRAAAEQADLVVFSELSLCGYYPGDLLDEPSFLQ 61 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFP-RQDQEG--VLNSVVILDAGNIIAVRDKINLPNY 120 + + L T VVG P R D G + NS+++L G I DK LP Y Sbjct: 62 RLDAGLQELLQATRQFPDLHWVVGAPTRHDGPGKPLHNSLLVLKNGQIRLQYDKQLLPTY 121 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKN------SNICKHLKKQGAEFLFS 173 + F E+R F G ++ + ++G L+CED W + +N + + + S Sbjct: 122 NIFDERRHFEPGADTAKVLRVGNCQVGFLVCEDGWNDQGADYATNPFVRMGDAAPDLVIS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + K ++RHE+ T + L I+Y+NQ+GGQD+++FDGASF + + L F+ Sbjct: 182 INASPSHLGKREQRHEVFTQAAARHKLAILYINQIGGQDQIVFDGASFAVEPEAGLVFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEADYNACVLSLRDYVQKN 290 + F E + E + +Q + + D + +P Q E VL LRDY ++ Sbjct: 242 RRFEEDIYTLELN-----TQGRFQACDGQTLPTVPAQGLATMEFYRQQIVLGLRDYARRC 296 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++G SGGIDSAL A+AVDALG ENV I +P Y+S S++D+ + LG + Sbjct: 297 GFQQVVVGSSGGIDSALTLALAVDALGAENVVGITMPSSYSSAGSVDDSVLLCRNLGIRL 356 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 PI +LV + E G+ EN+Q+R RG LM SN +LLTT NKSE Sbjct: 357 YEHPIKELVTTYARQFEASFGEPLKGLALENLQARARGTTLMEFSNAFGHLLLTTGNKSE 416 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +SVGY TLYGD +GG L DLYKT+VF+L+ N H E+IP +I++K PS Sbjct: 417 VSVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHINQHAG-------RELIPQAIIDKPPS 469 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEE----------SFIN--NDQEYNDETVRYV 518 AEL P Q D++SLPPY +LD+I+K +E + +F+ + ET+ V Sbjct: 470 AELAPGQKDEDSLPPYAVLDEILKWHIEGQHLSSKEYAQAAAFVTRLRAEAGGPETIARV 529 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + L++ SEYKRRQAP ++ ++FG R PI+ + Sbjct: 530 QKLVFRSEYKRRQAPPMLRVRPRAFGTGRQMPIAAHY 566 >gi|126657598|ref|ZP_01728753.1| NAD(+) synthetase [Cyanothece sp. CCY0110] gi|126621054|gb|EAZ91768.1| NAD(+) synthetase [Cyanothece sp. CCY0110] Length = 561 Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 219/576 (38%), Positives = 328/576 (56%), Gaps = 48/576 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNPV+GDI N K A ++A ++ + L+L EL + GYPP DL+ SFI+ Sbjct: 1 MKIAIAQLNPVIGDIENNAKKILDAAQKAVKKNVRLLLTPELSLCGYPPRDLLLYPSFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 + + L A ++VG + ++ + NS V+L+ G I V K L Sbjct: 61 FLTIQLQELAKQLPPQLA-VLVGTVTPNHAATIKGEKPLFNSAVLLENGEIKQVFHKWLL 119 Query: 118 PNYSEFHEKRTF----------ISGYSNDPIVFRDIRLGILICEDIWKNS---------- 157 P Y F E R F IS +N + I++G+ ICED+W + Sbjct: 120 PTYDVFDEYRYFEPGKELNFFQISLNNNSEEI---IKIGVTICEDLWNDEQFWQKRSYQQ 176 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 N + L + + +L+ASPY+ +K K R +++ H +PIIYVNQ+GG D+LIFD Sbjct: 177 NPIEELVNINIDLIINLSASPYHLHKPKLRTQMLQSSSYHYQVPIIYVNQIGGNDDLIFD 236 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYN 277 G SF + + + F+E + E+ + N ++ +P++EEE ++ Sbjct: 237 GNSFVVNEKGNIVLAATAFTEDFKIFEFDPKDKKIPLNSINH------LLPIEEEEL-FS 289 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A VL L+DY +K F KV++GLSGGIDSAL AAIA +A+G++NV +++P Y+S S++ Sbjct: 290 ALVLGLKDYAKKCQFTKVVLGLSGGIDSALVAAIAAEAIGEKNVLGVLMPSPYSSDHSIK 349 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 DA K LG + +LPI +++ + ++ E G+ EN+Q+RIRGN+LMAL+N Sbjct: 350 DAKKLVKNLGINHHILPIGEVMKTYDQVLDPLFSETEFGVAEENLQARIRGNLLMALANK 409 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H Sbjct: 410 FGYLLLSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVFSLCHWLNRH---------E 460 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVR 516 E+IP +IL K PSAEL+P+Q DQ+SLP Y ILD I+ + + SF Q ++ V+ Sbjct: 461 EIIPNNILIKPPSAELKPNQFDQDSLPSYEILDVILNLNINHYRSFHEICQAGFDPHIVK 520 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 V L+ +E+KR+Q+P+ K+T K+FG PIS Sbjct: 521 QVLKLVTRAEFKRKQSPLVLKVTDKAFGTGWRMPIS 556 >gi|124022199|ref|YP_001016506.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9303] gi|123962485|gb|ABM77241.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9303] Length = 564 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 216/577 (37%), Positives = 321/577 (55%), Gaps = 44/577 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQLNP+VGD+AGN K A EA G DL+L EL + GYPP DL+ + + Sbjct: 1 MRLALAQLNPLVGDLAGNGEKILAACREAADLGADLVLTPELSLWGYPPRDLLLSHNHLV 60 Query: 65 ACSSAIDTLKSD-THDG-GAGIVVGFPRQDQEGVL----NSVVILDAGNIIAVRDKINLP 118 S ++ + S H+ ++VG Q + L N++ ++ + V K LP Sbjct: 61 QQSDVLNQMASILAHEAPDLAVLVGLAEQAHDPQLPQLFNALALIKSSQWQVVARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNSNI----------CKHLK 164 Y F EKR F + + F R RLG+ ICED+W + L Sbjct: 121 TYDVFDEKRYFRPAGTPAVLEFERDGRRWRLGLTICEDLWVEEALQGKRIAGPDPIAALL 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 Q + L +L+ASP+ +K R + + P+IYVNQVGG DEL+FDGASF D Sbjct: 181 PQNIDLLLNLSASPFSQSKELLRQRLAARAAQRLSAPVIYVNQVGGNDELVFDGASFVVD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSL 283 +LA Q+ E ++ W+ S +A+ + +P E E + A VL + Sbjct: 241 EHAELALQLPSCRES-----------VAIWDATS--TATHLDVPTIEPLEKLFRALVLGV 287 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY K F + ++GLSGGIDSAL A IA ALG + V ++++P ++S S++DA A A Sbjct: 288 RDYAGKCGFKRALLGLSGGIDSALVAVIAAAALGADQVTSLLMPSPWSSAGSIDDALALA 347 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 K LG + I L+ +F + + L + P G+ AEN+QSRIRG +LMAL+N +LL Sbjct: 348 KRLGMATHTVSIATLMTNFEAALIPPLGKPPEGVTAENLQSRIRGTLLMALANQQDQLLL 407 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTE 458 +T NKSE++VGY TLYGDM+GG + D+YKT VF+L W +S + GL E Sbjct: 408 STGNKSELAVGYCTLYGDMNGGLAVIGDVYKTNVFRLCDWLDSPAAETCRKEVGLPTKGE 467 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETV 515 +I +I +K PSAELRP+Q D +SLP Y +LD ++K ++E + E ++ + +N + Sbjct: 468 LIGTTIRQKPPSAELRPNQRDSDSLPDYALLDPLLKALIEERLSTEQLVS--RGHNPALI 525 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 V+ LL +E+KRRQAP K+++++FG PI+ Sbjct: 526 GRVQQLLRRAEFKRRQAPPLLKVSSQAFGSGWRLPIA 562 >gi|88807389|ref|ZP_01122901.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. WH 7805] gi|88788603|gb|EAR19758.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. WH 7805] Length = 579 Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 219/580 (37%), Positives = 313/580 (53%), Gaps = 37/580 (6%) Query: 5 LKIAIAQLNPVVGDIAGN---IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++IA+AQ+NPVVGD+ GN I A A + + DL++ EL + GYPP DL+F + Sbjct: 3 MRIALAQINPVVGDLLGNADRIHSALDATKVDGKTSADLLVTPELSLWGYPPRDLLFSTA 62 Query: 62 FIQACSSAIDTLKS--DTHDGGAGIVVGFPR----QDQEGVLNSVVILDAGNIIAVRDKI 115 ++ A+D L+ D A ++VG Q + N++ ++ A V K Sbjct: 63 HLEQQQQALDRLQQRLDAEQQDAALLVGMAEVASDQQHPRLYNAMALVQASGWNVVARKQ 122 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNSNICKH--------- 162 LP+Y F E R F + S I R D RLG+ ICED+W + + K Sbjct: 123 LLPSYDVFDETRYFRASCSPSTISLRVNNHDWRLGLTICEDLWVDQELQKRRLVGPDPIA 182 Query: 163 -LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + + L + +ASP+ K R ++ + + P++YVNQVGG DELIFDGASF Sbjct: 183 ALMHERIDALINCSASPFSRGKATLRRKLASRAAGRLQCPVVYVNQVGGNDELIFDGASF 242 Query: 222 CF-DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 G+ Q+ F + S+ N L EA + A V Sbjct: 243 VMAPGESTPQLQLPDFCVSTAVWTAQLPASPSEQNPHPHQHGQDQDAGL---EALFRALV 299 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 + DY K F K ++GLSGGIDSAL A IA ALG E VQT+++P ++S S+EDA Sbjct: 300 TGVGDYATKCGFKKALLGLSGGIDSALVAVIAAAALGPEQVQTLLMPSPWSSSGSIEDAL 359 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A A LG ++PI L++ F + ++ L EPSGI AEN+QSRIRG +LMA++N Sbjct: 360 ALATRLGISSRIVPIQTLMDGFEATLTPALDAEPSGITAENLQSRIRGTLLMAMANQQGQ 419 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGP 455 +LL+T NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + GL Sbjct: 420 LLLSTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFALCHWLDSPDAGACRSELGLAF 479 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES---FINNDQEYND 512 +I +ILEK PSAELRP Q D ++LP Y +LD ++ ++E+ S IN + +D Sbjct: 480 DGPLIDRAILEKPPSAELRPDQKDSDALPDYGVLDPLLVDLIEHRMSGVQLINAGHDPDD 539 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 V +E L +E+KRRQAP K++ ++FG PI+ Sbjct: 540 --VTRIERLFRRAEFKRRQAPPLLKVSNQAFGSGWRLPIA 577 >gi|294056440|ref|YP_003550098.1| NAD+ synthetase [Coraliomargarita akajimensis DSM 45221] gi|293615773|gb|ADE55928.1| NAD+ synthetase [Coraliomargarita akajimensis DSM 45221] Length = 547 Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 216/569 (37%), Positives = 301/569 (52%), Gaps = 42/569 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI IAQ+N VGD+AGN A ++ +G +LILF EL + GYPP DL+FK F+ Sbjct: 1 MKIGIAQINTTVGDLAGNKQLILDAYQQLVTEGAELILFPELAVCGYPPRDLLFKSRFVS 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-----NSVVILDAGNIIAVRDKINLPN 119 + + + + A V+GF E N+ +AG + V K LPN Sbjct: 61 DTEACLLEIAKEISSTPA--VIGFVENRPEVATGRPFYNAAAWCEAGEVKTVGRKSLLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNI------CKH----LKKQG 167 Y F E+R F ++ P ++ + I +G+ ICEDIW + +I C L Q Sbjct: 119 YDVFDEERYFEP--ADGPAIYHWKGINVGLTICEDIWMHPDIPTSRRYCTDPVDMLAGQK 176 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + L +L+ASP++ K + R +V + P +Y N VGG DELIFDG S ++ Sbjct: 177 IDLLLNLSASPWHAGKNEAREPLVQDAADRCNCPAVYCNAVGGNDELIFDGGSLVAHHER 236 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 L + F + D ++S N + + L A ++A VL LRDY Sbjct: 237 GLVAGLAAFRTDLRVV----DLEVSNGNV-------SEHFNLTGNAATHDALVLGLRDYA 285 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 K+ F K +IGLSGGIDSA+ A+A +A G ENV I LP +S S +DAA A+ LG Sbjct: 286 HKSGFRKALIGLSGGIDSAVVCALAAEAFGPENVIGIALPSAISSQHSRDDAAGLAQNLG 345 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 +Y + I D V S + + + + ENIQ+R RG +LMA+SN A+LLTT N Sbjct: 346 IEYHEVAIADTVAAAESALGPLFEGRTADVTEENIQARARGLLLMAMSNKFGALLLTTGN 405 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSEISVGY TLYGDM GG + DL K +V+ LA + N E+IP + ++K Sbjct: 406 KSEISVGYCTLYGDMCGGLAVISDLPKMKVYALARYINRE---------REIIPVNTIDK 456 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSE 526 PSAELRP Q D++SLPPYP+LD I++ VE S Q Y+ + V + +E Sbjct: 457 PPSAELRPDQKDEDSLPPYPVLDGILRLYVEKGLSRTEIIAQGYDADIVNDIVRKTDLNE 516 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 YKR+QA G K T +FG R PI K+ Sbjct: 517 YKRKQAAPGLKTTPLAFGVGRRIPIVQKY 545 >gi|317154964|ref|YP_004123012.1| NAD+ synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316945215|gb|ADU64266.1| NAD+ synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 556 Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 212/572 (37%), Positives = 302/572 (52%), Gaps = 41/572 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + QLNPVVGDI GN A R+ EA G DL L E+ ++GYPP DL+ F+ Sbjct: 1 MKIGVLQLNPVVGDIEGNCAAIRQGVAEARSLGADLCLTPEMAVTGYPPRDLLLYGGFVA 60 Query: 65 ACSSAIDTLKSDTHD---GGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A D L + D GG +++G P + V N+ + G + V K L Sbjct: 61 RARGAADALARELEDDAPGGTPLLLGGVEPNPCNLGKPVFNAAFWCEGGAVRRVFRKTLL 120 Query: 118 PNYSEFHEKRTFISGYSNDP----IVFRDIRLGILICEDIWKNSNI----------CKHL 163 P Y F E R F + D + F+ + + ICED W + + + Sbjct: 121 PTYDVFDEARYFEPAPTGDQAGNILRFKGRTIAVTICEDAWNDKDYWETRSYARDPLEEA 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 G + + +L+ASP + K + R +++ +P++Y NQ GG D+LIFDG S F Sbjct: 181 AVHGPDLILNLSASPLFLGKQRLREDMLGAVARKYGVPLVYANQTGGNDDLIFDGRSCAF 240 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 L + F+ M +D + + ++ D E + A V+ Sbjct: 241 GPDGALTGRAPGFTPGVAM----FDIDAPKPDAIAPDD-------FGREAETWRALVMGT 289 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDYV+K+ F +IGLSGGIDSA+ AA+A +ALG ENV +++P Y+S S++D+ A A Sbjct: 290 RDYVRKSCFSTALIGLSGGIDSAVTAAVAAEALGAENVTCVLMPSPYSSRGSVDDSLALA 349 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 LG LPI ++N + ++ ENIQSRIRGN+LMALSN AMLL Sbjct: 350 ANLGVTTLTLPIAPIMNAYALALAGPFAGLAEDTTEENIQSRIRGNLLMALSNKRGAMLL 409 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY T+YGDMSGGF + D+ KT VF LA W N+H + IP + Sbjct: 410 TTGNKSELAVGYCTIYGDMSGGFAVVSDMDKTGVFALARWYNAH--------VRPAIPEA 461 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 I+ K PSAELRP Q DQ+SLPPY +LD I+ +E +S ++ +TV V L+ Sbjct: 462 IITKPPSAELRPDQKDQDSLPPYDVLDAILALHIERHQSARQIIGAGFDPQTVDRVLRLV 521 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +E+KRRQA G K+T +SFG P++ + Sbjct: 522 RSAEFKRRQAAPGIKLTPRSFGTGWRMPLACR 553 >gi|299529607|ref|ZP_07043044.1| NAD+ synthetase [Comamonas testosteroni S44] gi|298722470|gb|EFI63390.1| NAD+ synthetase [Comamonas testosteroni S44] Length = 567 Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 218/577 (37%), Positives = 320/577 (55%), Gaps = 38/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ IAQLN +VGDI+GNI + R A A + DL++F+EL + GY P DL+ + SF+Q Sbjct: 2 LKVTIAQLNYMVGDISGNIRRMREAATRAAAEQADLVVFSELSLCGYYPGDLLDEPSFLQ 61 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFP-RQDQEG--VLNSVVILDAGNIIAVRDKINLPNY 120 + + L T VVG P R + G + NS+++L G I DK LP Y Sbjct: 62 RLDAGLQELLQATRQFPDLHWVVGAPTRHNGPGKPLHNSLLVLKNGQIRLQYDKQLLPTY 121 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKN------SNICKHLKKQGAEFLFS 173 + F E+R F G ++ + ++G L+CED W + +N + + + S Sbjct: 122 NIFDERRHFEPGADTAKVLRVGNCQVGFLVCEDGWNDQGADYATNPFVRMGDAAPDLVIS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + K ++RHE+ T + L I+Y+NQ+GGQD+++FDGASF + + L F+ Sbjct: 182 INASPSHLGKREQRHEVFTQAAARHKLAILYINQIGGQDQIVFDGASFAVEPEAGLVFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEADYNACVLSLRDYVQKN 290 + F E E + +Q + + D + +P Q E VL LRDY ++ Sbjct: 242 RRFEEDVCTLELN-----AQGRFQACDGTALPTVPAQGLATMEFYRQQIVLGLRDYARRC 296 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++G SGGIDSAL A+AVDALG +NV I +P Y+S S++D+ + LG + Sbjct: 297 GFQQVVVGSSGGIDSALTLALAVDALGADNVVGITMPSSYSSAGSVDDSVLLCRNLGIRL 356 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 PI +LV + E G+ EN+Q+R RG LM SN +LLTT NKSE Sbjct: 357 YEHPIKELVTTYARQFEASFGEPLKGLALENLQARARGTTLMEFSNAFGHLLLTTGNKSE 416 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +SVGY TLYGD +GG L DLYKT+VF+L+ N H E+IP +I++K PS Sbjct: 417 VSVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHINRHAG-------RELIPQAIIDKPPS 469 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEE----------SFIN--NDQEYNDETVRYV 518 AEL P Q D++SLPPY +LD+I+K +E + +F+ Q ET+ V Sbjct: 470 AELAPGQKDEDSLPPYAVLDEILKWHIEGQHLSNKEYAHAATFVAKLRTQAGGPETIARV 529 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + L++ SEYKRRQAP ++ ++FG R PI+ + Sbjct: 530 QKLVFRSEYKRRQAPPMLRVRPRAFGTGRQMPIAAHY 566 >gi|264676785|ref|YP_003276691.1| NAD+ synthetase [Comamonas testosteroni CNB-2] gi|262207297|gb|ACY31395.1| NAD+ synthetase [Comamonas testosteroni CNB-2] Length = 567 Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 219/582 (37%), Positives = 321/582 (55%), Gaps = 48/582 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ +AQLN +VGDI+GNI + R A A + DL++F+EL + GY P DL+ + SF+Q Sbjct: 2 LKVTLAQLNYMVGDISGNIRRMREAATRAAAEQADLVVFSELSLCGYYPGDLLDEPSFLQ 61 Query: 65 ACSSAIDTLKS------DTHDGGAGIVVGFP-RQDQEG--VLNSVVILDAGNIIAVRDKI 115 + + L D H VVG P R D G + NS+++L G I DK Sbjct: 62 RLDAGLQELLQATRLLPDLH-----WVVGAPTRHDGPGKPLHNSLLVLKNGQIRLQYDKQ 116 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKN------SNICKHLKKQGA 168 LP Y+ F E+R F G ++ + ++G L+CED W + +N + Sbjct: 117 LLPTYNIFDERRHFEPGADTAKVLRVGNCQVGFLVCEDGWNDQGADYATNPFVRMGDAAP 176 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + + S+NASP + K ++RHE+ T + L I+Y+NQ+GGQD+++FDGASF + + Sbjct: 177 DLVISINASPSHLGKREQRHEVFTQAAARHKLAILYINQIGGQDQIVFDGASFAVEPEAG 236 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEADYNACVLSLRD 285 L F+ + F E E + +Q + + D + +P Q E VL LRD Sbjct: 237 LVFEARRFEEDVCTLELN-----AQGRFQACDGTALPAVPTQGLPTMEFYRQQIVLGLRD 291 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y ++ F +V++G SGGIDSAL A+AVDALG +NV I +P Y+S S++D+ + Sbjct: 292 YARRCGFKQVVVGSSGGIDSALTLALAVDALGADNVVGITMPSSYSSAGSVDDSVLLCRN 351 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG + PI +LV + E G+ EN+Q+R RG LM SN +LLTT Sbjct: 352 LGIRLYEHPIKELVTTYARQFEASFGEPLKGLALENLQARARGTTLMEFSNAFGHLLLTT 411 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE+SVGY TLYGD +GG L DLYKT+VF+L+ N H E+IP +I+ Sbjct: 412 GNKSEVSVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHINRHAG-------RELIPQAII 464 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE----------SFIN--NDQEYNDE 513 +K PSAEL P Q D++SLPPY +LD+I+K +E + +F+ Q E Sbjct: 465 DKPPSAELAPGQKDEDSLPPYAVLDEILKWHIEGQHLSNKEYAHAATFVAKLRTQAGGPE 524 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 T+ V+ L++ SEYKRRQAP ++ ++FG R PI+ + Sbjct: 525 TIARVQKLVFRSEYKRRQAPPMLRVRPRAFGTGRQMPIAAHY 566 >gi|325105211|ref|YP_004274865.1| NH(3)-dependent NAD(+) synthetase [Pedobacter saltans DSM 12145] gi|324974059|gb|ADY53043.1| NH(3)-dependent NAD(+) synthetase [Pedobacter saltans DSM 12145] Length = 546 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 209/568 (36%), Positives = 304/568 (53%), Gaps = 39/568 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +GD + NI K + +G DL++F E+ + GY P D + F+ Sbjct: 1 MKIALAQLNYCIGDFSSNIDKIISVLNDEKERGTDLVVFAEMSVCGYLPNDFLNYNQFVI 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EG--VLNSVVILDAGNIIAVRDKINLPNY 120 C +I+ + H G +VG P + EG + NS + G + V K LP Y Sbjct: 61 KCQESIEQIAQ--HAVGIACIVGAPEVNPILEGKDLYNSAFFFEEGAVKQVVRKSLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-----IC--KHLKKQGAEFLFS 173 F E R F S I F+ ++ + ICED+W N C L K+ +F+ + Sbjct: 119 DIFDEYRYFESAVDFKCIEFKGYKIAVTICEDLWNLGNNPLYKSCPMDELIKEEPDFMIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + ++R I++ LP++YVNQVG +LIFDG S FD + ++ Sbjct: 179 IAASPFDYKHEEQRLMILSQNSRKYQLPLLYVNQVGANTDLIFDGGSLVFDKAGDIVAEL 238 Query: 234 KHFSE--QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDYVQK 289 +F E Q F E QL + + S +Q+E Y A VL +RDY K Sbjct: 239 AYFKEDVQVFNIE-----QLRSSIVLGEKS-------IQKERVGQVYEALVLGIRDYFHK 286 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + F +GLSGGIDSA+ A+AV+ALG ENV ++LP KY+S S++DA A LGC+ Sbjct: 287 SGFRTATLGLSGGIDSAVVCALAVEALGAENVFPVLLPSKYSSDHSIKDAIDLANNLGCQ 346 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 Y +PI + F ++ P + ENIQ+R RG +LMA SN +LL TSNKS Sbjct: 347 YTTIPITKITESFEESLADEFAGLPQNLAEENIQARTRGVLLMAFSNKFGHILLNTSNKS 406 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E +VGYGTLYGDM G + + D YKTQV++LA + N E+IP + + K+P Sbjct: 407 ECAVGYGTLYGDMCGAISVIGDCYKTQVYKLADYINRE---------REIIPKNTITKAP 457 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP Q D +SLP Y +LD+I+ +E ++S + ++ V V +L+ +E+K Sbjct: 458 SAELRPDQKDSDSLPEYDLLDEILLEYIEMQKSADEIIEAGFDSPVVHRVTNLVNKAEFK 517 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 R Q +I+ KSFG R PI K++ Sbjct: 518 RFQTAPILRISPKSFGIGRRMPIVAKYK 545 >gi|4469317|emb|CAB38325.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces coelicolor A3(2)] Length = 538 Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 201/550 (36%), Positives = 287/550 (52%), Gaps = 62/550 (11%) Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAG---IVVGF--------PRQDQEGVL--NSV 100 EDL + SF++A +A+ +L + D G G ++VG PR Q N+ Sbjct: 3 EDLALRSSFVEASRAALRSLAARLADEGLGTVPVIVGHLDRSATAQPRYGQPAGAPQNAA 62 Query: 101 VILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNIC 160 +L G + K +LPNY F E R F+ G + + R + + + ICED+W++ Sbjct: 63 AVLYGGEVALSFAKHHLPNYGVFDEFRYFVPGDTLPVVRVRGVDVALAICEDLWQDGGRV 122 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + A L S+NASPY +K R E+V + Y+ GGQDEL+FDG S Sbjct: 123 PAARSARAGLLLSVNASPYERDKDDTRLELVRRRAQEAGCTTAYLAMTGGQDELVFDGDS 182 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHY-----DQQLSQWNYMSDDSASTMYI-------- 267 D + + F+E + + D + W + D AST + Sbjct: 183 IVVDRDGTVLARAPQFTEGCMVLDLDLPAADADPPRASW---TTDCASTGWCSPGRLGGS 239 Query: 268 ---------------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 PL ++E Y+A V LR YV KN F V+IGLSGGIDSAL A+IA Sbjct: 240 SRCPPVALLSGGHAEPLDDDEEVYSALVTGLRAYVAKNGFRSVLIGLSGGIDSALVASIA 299 Query: 313 VDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 DALG E+V + +P KY+S S +DAA A+ G Y + I + + + + Sbjct: 300 CDALGAEHVYGVSMPSKYSSGHSRDDAAELARRTGLHYRTVSIEPMFDAYTGAL------ 353 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 E +G+ EN+QSR+RG +LMALSN ++L NKSE++VGY TLYGD GG+ P+KD+ Sbjct: 354 ELTGLAEENLQSRLRGTLLMALSNQEGHLVLAPGNKSELAVGYSTLYGDSVGGYGPIKDV 413 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDI 492 YKT VF+LA WRN G P +P + + K PSAELRP Q D +SLP YP+LD + Sbjct: 414 YKTSVFRLAEWRNRAARDRGRTP---PVPENSITKPPSAELRPGQVDTDSLPDYPVLDAV 470 Query: 493 IKRIVENEES-----FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDR 547 + V+ + D+E T+R V+ +EYKRRQ P GTKI+ K FG+DR Sbjct: 471 LALYVDRDRGADEIVAAGYDRELVTRTLRMVDT----AEYKRRQYPPGTKISPKGFGKDR 526 Query: 548 LYPISNKFRD 557 P++N++R+ Sbjct: 527 RLPVTNRWRE 536 >gi|33863728|ref|NP_895288.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9313] gi|33635311|emb|CAE21636.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9313] Length = 581 Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 216/579 (37%), Positives = 321/579 (55%), Gaps = 48/579 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQLNP+VGD+AGN K A EA G DL+L EL + GYPP DL+ + + Sbjct: 18 MRLALAQLNPLVGDLAGNGEKILAACREAADLGADLVLTPELSLWGYPPRDLLLSHNHLV 77 Query: 65 ACSSAIDTLKS----DTHDGGAGIVVGFPRQDQEGVL----NSVVILDAGNIIAVRDKIN 116 S ++ + S + D ++VG Q + L N++ ++ + V K Sbjct: 78 QQSDVLNKMASILAREVPD--LAVLVGLAEQAHDPQLPQLFNALALIKSSQWQVVARKQL 135 Query: 117 LPNYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNSNI----------CKH 162 LP Y F EKR F + + F R RLG+ ICED+W + Sbjct: 136 LPIYDVFDEKRYFRPAGTPAVLEFERDGRRWRLGLTICEDLWVEEALQGKRIAGPDPIAA 195 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L Q + L +L+ASP+ +K R + + P+IYVNQVGG DEL+FDGASF Sbjct: 196 LLPQNIDLLLNLSASPFSQSKELLRQRLAARAAQRLSAPVIYVNQVGGNDELVFDGASFV 255 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVL 281 D +LA Q+ E L+ W+ S +A+ + IP E E + A VL Sbjct: 256 VDEHAELALQLPSCREA-----------LAIWDATS--TATHLDIPTIEPLEKLFRALVL 302 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 +RDY K F + ++GLSGGIDSAL A IA A+G + V ++++P ++S S++DA A Sbjct: 303 GVRDYAGKCGFKRALLGLSGGIDSALVAVIAAAAVGADQVTSLLMPSPWSSAGSIDDALA 362 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 AK LG + I L+ +F + + L + P G+ AEN+QSRIRG +LMAL+N + Sbjct: 363 LAKRLGMATHTVSIATLMTNFEAALIPPLGKPPEGVTAENLQSRIRGTLLMALANQQDQL 422 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPL 456 LL+T NKSE++VGY TLYGDM+GG + D+YKT VF+L W +S + GL Sbjct: 423 LLSTGNKSELAVGYCTLYGDMNGGLAVIGDVYKTNVFRLCDWLDSPAAETCRKEVGLPTK 482 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDE 513 E+I +I +K PSAELRP+Q D +SLP Y +LD ++K ++E + E ++ + ++ Sbjct: 483 GELIGTTIRQKPPSAELRPNQRDSDSLPDYALLDPLLKALIEERLSTEQLVS--RGHDPA 540 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 + V+ LL +E+KRRQAP K+++++FG PI+ Sbjct: 541 LIGRVQQLLRRAEFKRRQAPPLLKVSSQAFGSGWRLPIA 579 >gi|317968990|ref|ZP_07970380.1| carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. CB0205] Length = 561 Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 212/573 (36%), Positives = 311/573 (54%), Gaps = 41/573 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD++GN A+ A A G DL++ +EL + GYPP DL+ + S Sbjct: 1 MRVALAQINPLVGDLSGNGAQLLEACRHAAEGGADLVVSSELALWGYPPRDLLLRPSLRH 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + +D L D G + G+ Q + NSV +++ G V K LP+Y Sbjct: 61 KQDAVLDGLARDLPTGQSLLLGVSETVSDGQQPDLFNSVALVEKGVWRIVARKRLLPSYD 120 Query: 122 EFHEKRTFISGYSNDPIVF------RDIRLGILICEDIWKNSNI----------CKHLKK 165 F E+R F + +P + R RLG+ ICED+W + L Sbjct: 121 VFDERRYFRP--AEEPCLLELEREGRRWRLGLTICEDLWVEEQLHSQRLLGGDPVGDLAA 178 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + L +L+ASP+ K + R E+ + P++YVNQ GG DELIFDG SF Sbjct: 179 LKPDLLINLSASPFGQGKPQLRRELAKSAAQRLGAPVLYVNQAGGNDELIFDGGSFATTA 238 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 ++A Q+ F + + L+ W + +A+ IP +EE A VL +RD Sbjct: 239 NGEVAAQLA-FGKAD----------LACWTLGNATAAAP--IPC-DEELLLRALVLGVRD 284 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y +K F K ++GLSGGIDSAL A +A ALG + VQ +++P ++S S+ D+ A Sbjct: 285 YARKCGFGKALLGLSGGIDSALVAVLAAAALGAKQVQALLMPSPWSSEGSINDSLELANR 344 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG +PI L+ F + +S L P+G+ AEN+QSRIRG +LMA++N +LLTT Sbjct: 345 LGISTQTVPIEGLMGGFDAALSAPLGGTPAGVTAENLQSRIRGTLLMAMANQQGQLLLTT 404 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVI 460 NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + GL E+I Sbjct: 405 GNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFHLCDWIDSEAAQAVRQELGLPAEGELI 464 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETV-RYVE 519 +I K PSAELRP Q D +SLP Y +LD ++K ++E +S Q+ D + V Sbjct: 465 GSAIRSKPPSAELRPDQKDSDSLPDYAVLDPLLKALLEEHQSPEELAQQGTDPALAERVM 524 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 LL +E+KRRQAP K++ ++FG PI+ Sbjct: 525 GLLRRAEFKRRQAPPVLKLSQRAFGSGWRMPIA 557 >gi|113955214|ref|YP_731491.1| NAD+ synthetase [Synechococcus sp. CC9311] gi|113882565|gb|ABI47523.1| NAD+ synthetase [Synechococcus sp. CC9311] Length = 573 Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 211/584 (36%), Positives = 313/584 (53%), Gaps = 45/584 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMD----LILFTELFISGYPPEDLVFKK 60 ++IA+AQ NP+VGD++ N + A E + Q + L++ EL + GYPP DL+ Sbjct: 1 MRIALAQTNPLVGDLSRNAKRLVEACLEISDQAHNTPPALVVSPELSLWGYPPRDLLLSP 60 Query: 61 SFIQACSSAIDTLKSDTHDGG------AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 + +Q S A++ L+ G+V P Q + N+ +++A V K Sbjct: 61 AHLQQQSEALNQLQQGLSHALPQTALLVGVVEPAPDQQHPRLFNAAALVEANGWRVVARK 120 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNSNI----------C 160 LP Y F E R F + F+ D RLG+ ICED+W + Sbjct: 121 QLLPTYDVFDESRYFRPANQASVLSFKAEGQDWRLGLTICEDLWVEDALQAQRLVGPDPI 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +L + + L +L+ASP+ K RH++ + P++YVNQVGG DEL+FDG S Sbjct: 181 ANLIPEQVDVLLNLSASPFGRTKASIRHQLAARAAQRLDCPVVYVNQVGGNDELVFDGGS 240 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD----Y 276 F ++ Q+ E ++ W+ SA+T+ E AD + Sbjct: 241 FVMAANGEVELQLPTCREA-----------IACWDSTYRSSAATVGTTYPSEGADLEQLF 289 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A VL +RDYV K F + ++GLSGGIDSAL A IA ALG + VQ +++P ++S S+ Sbjct: 290 QALVLGVRDYVSKCGFQRALLGLSGGIDSALVAVIAAAALGADRVQALLMPSPWSSIGSI 349 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 +DA A AK L LPI DL+ F + ++ L++ PSG+ AEN+QSRIRG +LMA++N Sbjct: 350 DDAEALAKRLRISTSTLPIQDLMQGFEATLTPALEQAPSGVTAENLQSRIRGTLLMAVAN 409 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS----- 451 +LL+T NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + Sbjct: 410 QQGQLLLSTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFSLCRWLDSPDSKTSRKAL 469 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 GL ++I IL K PSAELRP+Q D +SLP Y LD ++K ++E S + Sbjct: 470 GLPVHNDLIGLEILNKPPSAELRPNQQDSDSLPDYSTLDPLLKDLIEKHSSGTQLIAAGH 529 Query: 512 DET-VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 D V+ +E L +E+KRRQAP K++ ++FG PI+++ Sbjct: 530 DPADVQRIEQLFRRAEFKRRQAPPVLKVSRQAFGTGWRLPIASR 573 >gi|260436677|ref|ZP_05790647.1| glutamine-dependent NAD(+) synthetase (NAD (+) synthase[glutamine-hydrolyzing]) [Synechococcus sp. WH 8109] gi|260414551|gb|EEX07847.1| glutamine-dependent NAD(+) synthetase (NAD (+) synthase[glutamine-hydrolyzing]) [Synechococcus sp. WH 8109] Length = 557 Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 210/572 (36%), Positives = 314/572 (54%), Gaps = 41/572 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQLNPV+GD GN + A A Q ++L+L EL + GYPP D + + S ++ Sbjct: 1 MRIALAQLNPVIGDFEGNAKRILEAVLRAEEQAVELVLTPELSLWGYPPRDQLLEPSRLK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIV-VGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYS 121 + L + + +V P D + N VV+++ + K LP+Y Sbjct: 61 QQDMVLQWLVNQLNSSVTLLVGAALPATDARSPRLHNGVVLVNRLGWRPIAQKQLLPSYD 120 Query: 122 EFHEKRTFISGYSNDPIVFR---DIRLGILICEDIWKNSNICK----------HLKKQGA 168 F E+R F G + P + R R+G+ ICED+W + + + L + Sbjct: 121 VFDERRYFRPG--DGPCLLRLPNGKRVGLTICEDLWVDDGLQRERLDGPDPIDQLIPEQP 178 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQ 226 + + +L ASP+ +K R ++ ++ P+IY+NQVGG DEL+FDGASF DG Sbjct: 179 DLVINLAASPFDASKPALRQQLAAAAAQRLNCPLIYLNQVGGNDELVFDGASFVMGADGA 238 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 QL + ++ L+ W+ SD S P+ E + A VL +RDY Sbjct: 239 MQLELPV-------------CEEHLAVWD--SDHPTSIQIQPMPPLERLFRALVLGVRDY 283 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +K F+K ++GLSGGIDSAL A IA ALG E V +++P ++S S++DA A A+ L Sbjct: 284 ARKCGFNKALLGLSGGIDSALVAVIASAALGNEAVSALLMPSPWSSAGSIDDALALAERL 343 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G + + +PI L+ + ++ L P G+ AEN+QSRIRG +LMA++N +LLTT Sbjct: 344 GLQTNTVPIAGLMEGYDQALTAPLGATPQGVTAENLQSRIRGTLLMAVANQQGQLLLTTG 403 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH---GITSGLGPLT--EVIP 461 NKSE++VGY TLYGDM+GG + DLYKT VF L W +S G LG T E++ Sbjct: 404 NKSELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWLDSDAALGCRQALGLPTHGELVG 463 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEH 520 +I K PSAELRP+Q D +SLP Y LD ++K +++ +S + +D V+ VE Sbjct: 464 EAIRRKPPSAELRPNQKDSDSLPDYHALDALLKALIQERQSGPTLVEAGHDPALVQRVER 523 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 LL +E+KRRQA K++ ++FG PI+ Sbjct: 524 LLKKAEFKRRQAAPLLKVSPQAFGSGWRLPIA 555 >gi|332705803|ref|ZP_08425879.1| NH(3)-dependent NAD [Lyngbya majuscula 3L] gi|332355595|gb|EGJ35059.1| NH(3)-dependent NAD [Lyngbya majuscula 3L] Length = 626 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 222/629 (35%), Positives = 319/629 (50%), Gaps = 82/629 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP +GDI GN + A Q + L+L EL + GYPP DL+ F + Sbjct: 1 MKIAIAQLNPTIGDITGNAQRILEVANTAASQDVRLLLTPELSLCGYPPRDLLLNPKFRE 60 Query: 65 ACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLP 118 + ++ + L A G V + + G + NS+ +L+ G + + K LP Sbjct: 61 SMTTQVQQLAQQLPLSLAVLVGTVTPNTKAELAGGKPLYNSIALLEGGKVRQIFHKRLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF-------------RDIRLGILICEDIWKNS-------- 157 Y F E R F G ++ I++G+ ICED+W + Sbjct: 121 TYDVFDENRYFEPGRESNSFTIDHQPSAITTQNAHSPIKIGVTICEDLWNDEEFWGKRSY 180 Query: 158 --NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 N L +QG + + +L+ASPY K K R ++ S H PI+Y NQ+GG D+LI Sbjct: 181 QVNPITDLVQQGVDLVVNLSASPYSAGKQKTREAMLRHSASRYHTPILYANQLGGNDDLI 240 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE---- 271 FDG S F+ ++ + + F + E YD++ + + + Sbjct: 241 FDGCSVAFNQAGEMVCRARAFETDLVILE--YDRETHDLVTPPETTIESPPSAAIAPAPA 298 Query: 272 --EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 +E ++A VL +RDY +K F KV+IGLSGGIDSAL AAIA ALG ENV I++P Sbjct: 299 SLDEEIWSALVLGVRDYTRKCGFKKVVIGLSGGIDSALVAAIATAALGPENVLGILMPSP 358 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 Y+S S++DA + A+ LG K L I L+ F ++ G+ ENIQSRIRG Sbjct: 359 YSSDHSVKDALSLAQNLGIKTHTLAIGSLMEGFDQTLTSLFAGTEFGVAEENIQSRIRGT 418 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +LMA++N +LL+T NKSE++VGY TLYGDM+GG + D+ KT+V+ L W NS Sbjct: 419 LLMAIANKFGYLLLSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCRWLNSRAE 478 Query: 450 TS--------------------------------------GLGPL--TEVIPPSILEKSP 469 S G PL TE+IP +IL K P Sbjct: 479 ESQVNQKLQVSTLNLEPSDSSSKLQADQRQPANLTDSNAKGEQPLSQTEIIPANILIKPP 538 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSE 526 SAEL+P Q DQ+SLP Y ILDDI++R+++ E I D + E V + L+ E Sbjct: 539 SAELKPGQVDQDSLPSYDILDDILERLIQQHQAPEQII--DAGHQPEVVHKIIRLVARVE 596 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G K+T ++FG PI++++ Sbjct: 597 FKRRQAPPGLKVTDRAFGTGWRMPIASRW 625 >gi|332670746|ref|YP_004453754.1| NAD+ synthetase [Cellulomonas fimi ATCC 484] gi|332339784|gb|AEE46367.1| NAD+ synthetase [Cellulomonas fimi ATCC 484] Length = 555 Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 214/577 (37%), Positives = 309/577 (53%), Gaps = 44/577 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+IA+AQ++ VGD+ GN A A G L++F E+ ++GYP EDL + S Sbjct: 1 MTTLRIALAQIDTCVGDVDGNAAAVLSWARRAADAGAHLVVFPEMTLTGYPIEDLALRAS 60 Query: 62 FIQACSSAID---------------TLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA 105 F + +A+ L + G G V D G+ N V+L Sbjct: 61 FRRGAEAALQRTAAELAAAGLGDLAVLVGTVGERGQGDVDA---PDDRGLPTNQAVLLQH 117 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 G ++ DK +LPNY F E R F G + + R+G+++CEDIW++ + + Sbjct: 118 GRVVTRYDKHHLPNYGVFDEFRIFAPGDATCVVDVAGRRVGVVVCEDIWQDGGPVAQMDE 177 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + L LN SPY K R E+ + V P+ YVN VGGQD+L+FDG SF Sbjct: 178 NDVDLLVVLNGSPYEEGKGHVRVELAQRRAREVDAPVAYVNLVGGQDDLVFDGGSFVVGT 237 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA---STMYIPLQEEEADYNACVLS 282 +L F E + W+ +A + PL +E Y A V Sbjct: 238 DGELLAGAPQFVEHLLL-----------WDLAERGTAPVRGAVAAPLAPDEEVYRAIVTG 286 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L YV+KN F V++GLSGGIDSAL AAIA DA+G ENV + +P ++S S +DAA Sbjct: 287 LAGYVRKNGFRSVVLGLSGGIDSALTAAIAADAIGGENVVGVSMPSSFSSAHSKDDAADL 346 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK LG V PI +V+ F +Q E G+ EN+Q+R+RG +LMA+SN ++ Sbjct: 347 AKRLGADLRVQPIASVVDAF---QAQLALE---GVAEENLQARVRGVLLMAVSNREGHLV 400 Query: 403 LTTSNKSEISVGYGTLYGDMS-GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 + NKSE++ GY T+Y S GGF PLKD+ K++V+ LA WRN++ G P IP Sbjct: 401 IAPGNKSELATGYATIYDAGSIGGFAPLKDVDKSRVWALARWRNAYAEARGEVP---PIP 457 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 S + K PSAELRP Q DQ+SLPPY +LD+++ VE+ E + ++ V V Sbjct: 458 ESSITKPPSAELRPGQLDQDSLPPYDLLDEVLDAYVEHAEGRAELLARGFDPAVVDKVVT 517 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P+++++R+ Sbjct: 518 LVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTSRWRE 554 >gi|332665535|ref|YP_004448323.1| NAD+ synthetase [Haliscomenobacter hydrossis DSM 1100] gi|332334349|gb|AEE51450.1| NAD+ synthetase [Haliscomenobacter hydrossis DSM 1100] Length = 545 Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 203/566 (35%), Positives = 300/566 (53%), Gaps = 38/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQ N +G+ GN+ K + E+A +QG D+I F EL GYP D + FI Sbjct: 1 MRIAIAQFNAHIGNFEGNLTKMLQMTEDAKQQGADIICFPELATCGYPARDFLEFDDFIH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EG--VLNSVVILDAGNIIAVRDKINLPNY 120 ++I TL G IVVG P ++ EG + NSV L G + V+ K LP Y Sbjct: 61 QADASIHTLAKAAQ--GIAIVVGSPTRNPQIEGKDLYNSVYFLAYGRVEFVQHKALLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN------IC--KHLKKQGAEFLF 172 F E R F + + R+ + +CEDIW N IC + E + Sbjct: 119 DVFDEYRYFQPASEFKIVEYMGKRIALTVCEDIWNVGNENPLYTICPMDEMMPYQPELMI 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASP+ H+ +R +V + ++PI YVN VGGQ EL+FDG S + + Sbjct: 179 NVSASPFSHDHAPERIHVVRANVERYNVPIFYVNHVGGQTELLFDGGSVVMSPNGNVHDE 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 M F E + + D+ ++ + + ++A ++ +RDY K Sbjct: 239 MPFFEE--CIRVYELDEVMAGQKQVEQTRNKIALM--------HDALLMGIRDYFGKLGL 288 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K I+GLSGGIDSA+ +A ALG +NV+ +++P +Y+S S+ DA A+ LG +YD+ Sbjct: 289 KKAILGLSGGIDSAVTVVLAARALGADNVRVLLMPSQYSSDHSVNDARKLAENLGVQYDL 348 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 L + + + + P I EN+Q+RIRG +LMA SN +LL TSNKSE++ Sbjct: 349 LAVEPMYQAYMETLKPHFWGFPFNITEENLQARIRGMLLMAFSNKFGHILLNTSNKSEMA 408 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGYGTLYGDM GG + L D+YKT+V++LA + N G EVIP + + K PSAE Sbjct: 409 VGYGTLYGDMCGGLSVLGDVYKTEVYELAHYINKDG---------EVIPENSITKPPSAE 459 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEES---FINNDQEYNDETVRYVEHLLYGSEYKR 529 LRP Q D +SLP Y ILD ++ +E + I + ++D VR V L+ +E+KR Sbjct: 460 LRPDQKDSDSLPDYDILDAVLYNYIERHQGPKELI--EMGFDDALVRRVLRLVNINEFKR 517 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKF 555 Q +++AK+FG R PI K+ Sbjct: 518 HQTAPVLRVSAKAFGMGRRMPIVGKY 543 >gi|322370893|ref|ZP_08045448.1| NH(3)-dependent NAD(+) synthetase [Haladaptatus paucihalophilus DX253] gi|320549570|gb|EFW91229.1| NH(3)-dependent NAD(+) synthetase [Haladaptatus paucihalophilus DX253] Length = 557 Score = 336 bits (862), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 209/574 (36%), Positives = 300/574 (52%), Gaps = 31/574 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++A+ Q N VGDIAGN K A DL++F+EL + GYPP+DLV + + Sbjct: 1 MSTVRVALGQQNYTVGDIAGNERKIEDGIHRAREANADLVVFSELALVGYPPQDLVKRTA 60 Query: 62 FIQACSSAIDTLKSDTHDGGA--GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ A A+D + ++T D A G V P + V N+V + G + +K LP Sbjct: 61 FVDAQRDALDRIAAETTDITALVGFVARNPEPYGKEVQNAVAVCRDGEVTGQTEKRLLPT 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKH----------LKKQGA 168 Y F E R F D LG+ ICED W ++ + L GA Sbjct: 121 YDVFDEDRFFQPATRQSVHALPDGTELGVSICEDAWNEPDVWERPEYDEDPIEDLVDAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + L + +ASP+Y K R + + +++VNQVG DEL+FDG SF Sbjct: 181 DLLVNCSASPFYGGKGAFRERLFGAHANDHGKWLVFVNQVGANDELVFDGRSFVVAPDGT 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 +A ++ F E++F YD L + + D A P +A L +RDYV+ Sbjct: 241 IACRLAAF-EEDFAV---YDVPLDVESPATHDVADE---PATGPAEIRSALALGIRDYVR 293 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K F V++GLSGGIDS++ AA+A DALG ENV + +P +YTS S DA A+ LG Sbjct: 294 KTGFENVVVGLSGGIDSSITAALAADALGPENVLGVGMPTRYTSDASEIDARELAENLGI 353 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + LPI + F ++ L E P G+ EN+Q+RIR LMA++N +LL TSN+ Sbjct: 354 DFLDLPIENTFEAFERELTPILDETP-GVTEENVQARIRATTLMAIANEQGRLLLATSNR 412 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++VGY TLYGDM G P+ D KT V+ LA N H E IP ++EK Sbjct: 413 SELAVGYTTLYGDMCGALAPIADCPKTFVYDLARHLNEH---------EETIPERVIEKP 463 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEY 527 PSAELR QTD++ LPPY ILD I+ V+ ++ + +D E V V +L+ +EY Sbjct: 464 PSAELRADQTDEDDLPPYEILDSILAGYVDEGQTTDELVESGHDREIVERVLSMLHRAEY 523 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKFRDHISE 561 KR QA K++ K+FG YP++ + +S+ Sbjct: 524 KRFQAAPVLKVSPKAFGVGWRYPLAANYEGVLSK 557 >gi|297569897|ref|YP_003691241.1| NAD+ synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925812|gb|ADH86622.1| NAD+ synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 569 Score = 336 bits (861), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 210/582 (36%), Positives = 307/582 (52%), Gaps = 45/582 (7%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 +K+A+ Q+NP +GD N I + RRA AN G +L + EL ISGYPPEDL+ + Sbjct: 1 MKLALIQINPRIGDFRHNTEVIIDRCRRA---AN-LGCELAVLPELAISGYPPEDLLERP 56 Query: 61 SFIQACSSAIDTLKSDTHDGG--AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F+ A++ L + G G ++ P + + N+ ++ G I+A K LP Sbjct: 57 DFLAHHQRALERLLKEIRGIGVLCGAIIPNPAPTGKPLHNAALLFADGEILATTTKRLLP 116 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH---------------L 163 Y F E R F G I F+ +RL I ICED+W + H Sbjct: 117 TYDVFGESRYFEPGPPGKIIEFQGLRLAITICEDVWNHVIFTPHRPYHHDPVAELLGPPA 176 Query: 164 KKQG-----AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + G A+ L ++ ASP+ K +R +I +P+++VNQVGGQD LIFDG Sbjct: 177 ARSGNTPAPADLLVNIAASPFESGKTARREQIFQTISRRYQIPLVFVNQVGGQDSLIFDG 236 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--Y 276 S ++ ++ + F E +T + Q + + + + + EA Sbjct: 237 DSLAYNTDGRVICRAARFQED--LTVFALPQASGPGEETAPSAGANLPGADHDLEAAEIL 294 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A VL D+V+K F + I+GLSGG+DSAL A IA ALG V + LP Y++P S Sbjct: 295 AALVLGTGDFVRKCGFSQTILGLSGGLDSALTAVIAAQALGPAKVLGLALPSAYSAPASQ 354 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-SGIVAENIQSRIRGNILMALS 395 EDA A A LG Y+VLPI ++ + ++ L ++ G+V +N+Q+RIRGN+LMA S Sbjct: 355 EDARALAANLGLAYEVLPIDQVLAAYRPALAPLLGDQSWPGLVEQNLQARIRGNLLMAES 414 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N S +LL T NKSE++VGY TLYGDM G L D+ KT V++LA N Sbjct: 415 NRSGRLLLNTGNKSELAVGYCTLYGDMCGALAVLADVPKTMVYRLAKLVNRE-------- 466 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE-ESFINNDQEYNDET 514 E+IP +E+ PSAEL P Q D + LPPY +LD I++ +E + E+ + Y Sbjct: 467 -EEIIPRRTIERPPSAELAPGQRDDDELPPYEVLDPILQAYLEEQLEAAAIIQRGYPATV 525 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 V V ++ +E+KRRQAP G KI+ K+FG RLYP++ ++ Sbjct: 526 VNEVIERIHRNEHKRRQAPPGLKISGKAFGAGRLYPLTANYQ 567 >gi|300313858|ref|YP_003777950.1| NH(3)-dependent NAD(+) synthetase [Herbaspirillum seropedicae SmR1] gi|300076643|gb|ADJ66042.1| NH(3)-dependent NAD(+) synthetase protein [Herbaspirillum seropedicae SmR1] Length = 565 Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 203/575 (35%), Positives = 306/575 (53%), Gaps = 35/575 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IAIAQ NP +GD GN+A + A + G DL++F EL I GY P DL+ + F+ Sbjct: 2 LRIAIAQCNPTIGDFEGNLALHLDGLQRAAQAGADLVVFPELSICGYYPGDLLEEARFLD 61 Query: 65 ACSSAI-DTLKSDTHDGGAGIVVGFPRQDQ---EGVLNSVVILDAGNIIAVRDKINLPNY 120 + + D + + G V+G PR++ + + N+++ + G I+A K LP Y Sbjct: 62 RAEATLQDVIDATRRLPGLTAVIGAPRRNPGPGKPLFNALLAVREGRIVAEYHKQLLPVY 121 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 F + R F +G ++ + +R+G LICED W + N + L + A+ + S Sbjct: 122 GVFDDGRHFEAGPETACVLPLKGMRVGFLICEDGWNDDLRSYRVNPFEKLAQADAQLVVS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP K +RH + + ++YVNQVGGQD+L++DG SF Q LAF+ Sbjct: 182 INASPSDVGKRSQRHALFQAACLRRQMALLYVNQVGGQDQLVYDGGSFAMSPLQGLAFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSA-STMYIPLQEEEADYNACVLSLRDYVQKNNF 292 +E + + + L + TM P E +L LRDY ++ F Sbjct: 242 ARLAEDFQVLAFEGGRFLRSDGVGAPQCIDQTMATP----EFHRRQILLGLRDYARRCGF 297 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 KV++G SGGIDSA+ A+A +ALG +NV + +P ++S S+ D+ +ALG Sbjct: 298 GKVVVGSSGGIDSAVTIALAAEALGAQNVVAVTMPSVFSSAGSVSDSETLCQALGVTLFR 357 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 PI DLV F + G+ EN+Q+R+RG ILM SN A+LLTT NKSEIS Sbjct: 358 HPIADLVREFEDGFATAFGAPLRGLPLENLQARVRGAILMEYSNGYDALLLTTGNKSEIS 417 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGD +GG + DLYKT+V+ LA N+ E+IP +I++K+PSAE Sbjct: 418 VGYCTLYGDTNGGLGLIGDLYKTEVYALARHLNAQAG-------REIIPAAIIDKAPSAE 470 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ------------EYNDETVRYVEH 520 L P Q D +SLPPY +LD+I+K +E + Q + V + Sbjct: 471 LAPDQRDTDSLPPYEVLDEILKWHIEGSRLPADEAQAAARTVEQLSGTDTGAALVERICR 530 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ +EYKRRQ+P ++ +++FG R PI+ ++ Sbjct: 531 MVARNEYKRRQSPPVIRLRSRAFGSGRQIPIAVRY 565 >gi|300770964|ref|ZP_07080841.1| NAD synthetase [Sphingobacterium spiritivorum ATCC 33861] gi|300762237|gb|EFK59056.1| NAD synthetase [Sphingobacterium spiritivorum ATCC 33861] Length = 546 Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 200/563 (35%), Positives = 308/563 (54%), Gaps = 31/563 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +G+ N + A Q DLI+F EL I GYP +DL+ FIQ Sbjct: 1 MKIALAQLNYHIGNFEKNNSAIIHTITRAKEQQADLIIFAELAIGGYPAKDLLRNAVFIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP--RQDQEG--VLNSVVILDAGNIIAVRDKINLPNY 120 C+ AI+ + S HD ++G P D EG + N V + G + + K LP+Y Sbjct: 61 NCADAIELIASHCHD--IACIIGAPIRNTDPEGKSLYNGAVFIQDGKVSHISKKGLLPDY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW----KNSNI---CKHLKKQGAEFLFS 173 F E R F + + F+ + + +CED+W NS + + L ++ + + Sbjct: 119 DVFDEYRYFEPSRNFNCFKFKGETIALTVCEDLWDDDSSNSYVGDPMEELLRENPSLIVN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + + R ++ Q++ + P++YVNQVG ++IFDG S + ++ ++ Sbjct: 179 IAASPFSYTHFENRLTVLRKQVARANCPLLYVNQVGAHMDIIFDGRSLALNKSGEIVREL 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F E++ + L+ N S ++ I L E A +L LRDY K+ F Sbjct: 239 GKF-EEDLQVVTFENGDLASAN--SSITSGHTEIALIHE-----ALILGLRDYFLKSGFK 290 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K +GLSGG+DSA+ AA+A +A+G ENV I++P Y+S SL+DA K GC++ ++ Sbjct: 291 KATLGLSGGLDSAVVAALACEAIGAENVLAILMPSVYSSDHSLKDALDLVKNTGCQHHII 350 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI D+ F +S+ + ENIQ+R RG +LMA+SN ++L TSNKSE +V Sbjct: 351 PIKDVAQAFEGTLSKVFEGLQPDTTEENIQARTRGTLLMAISNKLGHIVLNTSNKSEAAV 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM+G + + D+YKTQ + LA + N E+IP + + K PSAEL Sbjct: 411 GYGTLYGDMAGSISVIGDVYKTQAYDLAKYINRE---------REIIPQNTIVKPPSAEL 461 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQA 532 RP Q D +SLPPY ILD ++ +++E E+S + DE V + L+ +E+KR QA Sbjct: 462 RPDQKDSDSLPPYDILDAVLFQLIELEKSGSEVVKTGFDEALVLRISKLVNNAEFKRFQA 521 Query: 533 PVGTKITAKSFGRDRLYPISNKF 555 P +++ K+FG R P+ K+ Sbjct: 522 PPILRVSPKAFGSGRSMPLVAKY 544 >gi|116073675|ref|ZP_01470937.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. RS9916] gi|116068980|gb|EAU74732.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. RS9916] Length = 573 Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 209/581 (35%), Positives = 316/581 (54%), Gaps = 41/581 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NP+VGD++GN + A +A Q DL++ EL I GYPP DL+ ++ + Sbjct: 1 MRIALAQINPLVGDLSGNAQRILEASRQAIDQQADLVVTPELAIWGYPPRDLLLNRARVN 60 Query: 65 ACSSAIDTLKSDTHDGGA--GIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 +D L + + A G++VG +G + N+ ++ G V K LP Sbjct: 61 EQQQVMDQLSRELGELNAELGVLVGLVEGTADGQHPRLFNAAALIRQGQWEVVGRKQLLP 120 Query: 119 NYSEFHEKRTFISGYSND----PIVFRDIRLGILICEDIW----------KNSNICKHLK 164 Y F E R F PI R +LG+ +CED+W K + L Sbjct: 121 TYDVFDESRYFRPADGPSMLTFPIGDRTWQLGLTLCEDLWVDPTLHGQRLKGPDPIAALA 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASP+ +K RH++ + + P++YVNQVGG DEL+FDGASF Sbjct: 181 TKKCDLLLNLSASPFGRDKTAVRHQLAQQAANRLQCPVVYVNQVGGNDELVFDGASFVM- 239 Query: 225 GQQQLAFQMKHFSEQNFMTEW--HYDQQLSQWNYMSDDSA--STMYIPLQEEEADYNACV 280 K + FM + ++ W+ + +S+ ++ P+ EE + A V Sbjct: 240 ------LPGKGAASAGFMPLQLPSCRESVAVWDAKASESSPLASTASPIPVEEELFRALV 293 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L +RDY K F + ++GLSGGIDSAL A IA ALG + VQ +++P ++S S++DAA Sbjct: 294 LGVRDYAGKCGFQQTLLGLSGGIDSALVAVIAAAALGGDRVQGLLMPSPWSSQGSIDDAA 353 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A A LG LPI L++ + + ++ L P+ + AEN+QSRIRG +LMA++N Sbjct: 354 ALASRLGLSTQTLPIAPLMHSYDAALTPALAGPPTDVTAENLQSRIRGTLLMAVANQQGQ 413 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG----PL 456 +LLTT NKSE++VGY TLYGDM+GG + DLYK+ VF + W +S+ PL Sbjct: 414 LLLTTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFAVCDWLDSNRSKPCRQDFHLPL 473 Query: 457 -TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYND 512 E+I +I EK PSAELRP Q D +SLP Y +LD ++K ++E E + + Sbjct: 474 DGELIGQAIREKPPSAELRPDQKDSDSLPDYALLDPLLKDLIEERCGREQLLKRGHPAAE 533 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 V V+ L SE+KRRQA K+++++FG PI++ Sbjct: 534 --VDRVQRLFRRSEFKRRQAAPLLKVSSQAFGSGWRLPIAS 572 >gi|254432694|ref|ZP_05046397.1| glutamine dependent NAD+ synthetase [Cyanobium sp. PCC 7001] gi|197627147|gb|EDY39706.1| glutamine dependent NAD+ synthetase [Cyanobium sp. PCC 7001] Length = 567 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 209/579 (36%), Positives = 308/579 (53%), Gaps = 45/579 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQLNP+VGD+AGN + RA +A G DL+L EL + GYPP DL+ + + Sbjct: 1 MRLALAQLNPLVGDLAGNAERILRAWRKAAAAGADLVLTPELSLWGYPPRDLLLHPARLA 60 Query: 65 ACSSAIDTLKSDT--HDGGAGIVVGFPRQDQEGVL----NSVVILDAGNIIAVRDKINLP 118 A ++ +D L ++VG L N++ ++D+ V K LP Sbjct: 61 AQTTVLDQLAGALAGQANAPALLVGIAETSGSRELPNLHNALALVDSCGWRVVARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF------RDIRLGILICEDIWKNSNI----------CKH 162 Y F E+R F G ++P V R RLG+ +CED+W + Sbjct: 121 TYDVFDEQRYFRPG--SEPAVLELRRGERPWRLGLTVCEDLWVEEELQGQRLAGPDPVAA 178 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L+ E L +L+ASP+ K + RH + + P++YVNQVGG DEL+FDGASF Sbjct: 179 LRGLQVELLINLSASPFSPAKTELRHALAARAAQRLGCPVVYVNQVGGNDELVFDGASFV 238 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN--YMSDDSASTMYIPLQEEEADYNACV 280 + +A Q+ E L W+ S D + E + A V Sbjct: 239 VESSGAVACQLPSCREG-----------LEIWSPTTTSPDPSLPAPALPPPMEQVFRALV 287 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L +RDY +K F ++GLSGGIDSAL A IA ALG V+ +++P ++S S++DA+ Sbjct: 288 LGVRDYARKCGFQCGLLGLSGGIDSALVAVIATAALGPAAVRALLMPSPWSSAGSVDDAS 347 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A A+ LG + +PI L+ F + + L P+G+ AEN+QSRIRG +LMA++N Sbjct: 348 ALAQRLGLRVSTVPIGPLMAGFDAALQPALGHAPTGLTAENLQSRIRGTLLMAVANQEGQ 407 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGP 455 +LL+T NKSE++VGY TLYGDM+GG + + DLYK+ VF LA+W +S ++ GL Sbjct: 408 LLLSTGNKSELAVGYCTLYGDMNGGLSVIGDLYKSTVFALAAWLDSPEASACRLELGLPA 467 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDE 513 E++ +I K PSAELRP Q D +SLP Y LD +++ +VE S + D + Sbjct: 468 EGELVGRAIRAKPPSAELRPDQRDSDSLPEYDRLDPLLEALVEERRSVEELAVDPRFG-P 526 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 V LL +E+KRRQA K++ +F PI+ Sbjct: 527 MAEQVARLLRRAEFKRRQAAPVLKVSGHAFDSGWRMPIA 565 >gi|158338012|ref|YP_001519188.1| NAD synthetase [Acaryochloris marina MBIC11017] gi|158308253|gb|ABW29870.1| NAD+ synthetase [Acaryochloris marina MBIC11017] Length = 569 Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 213/572 (37%), Positives = 313/572 (54%), Gaps = 40/572 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP +GD+ GN A A ++G L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQLNPTIGDLVGNAEAIAAAATAAEQEGATLLLTPELSLCGYPPRDLLLDPSFVE 60 Query: 65 ACSSAIDTLKSDTH-DGGAGIVVGFPRQD--QEG--VLNSVVILDAGNIIAVRDKINLPN 119 A + +D L TH ++VG +Q+ Q G + NS+V L G I K LP Sbjct: 61 AAQTTLDQLA--THLPAKLHVLVGSVQQNAAQGGKPLFNSIVHLHNGEIQQCFHKHLLPT 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICK----------HLKKQGAE 169 Y F E R F G+ + + ++ ++G+ ICED+W NS + L + Sbjct: 119 YDVFDEDRYFEPGHQPNVLDLKEGKIGVTICEDLWNNSEFWEKQAYAVDPVAELMSYNVD 178 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L+ASP+ K R ++ H P+IY NQVGG D+LIFDG S + Q + Sbjct: 179 LIINLSASPFCVGKQALREAMLRHHAQQYHCPLIYANQVGGNDDLIFDGRSVAVNRQGDV 238 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQW--NYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 + K F+ + ++ L +SD +A ++A VL LRDY Sbjct: 239 VGRAKGFAPDLLLFDYEAHDLLPSRIEPAVSDINAEI-----------WSALVLGLRDYA 287 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 QK F + ++GLSGGIDS+L AAIA ALG ENV +++P Y+S S++DA A+ LG Sbjct: 288 QKCGFSQAVLGLSGGIDSSLVAAIAAAALGPENVLGVLMPSPYSSDHSIKDAEDLAQNLG 347 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 L I + + ++S G+ ENIQ+RIRGN+LMA++N +L++T N Sbjct: 348 MPTTQLAIASAMQTYDQILSSVFAGTEPGVAEENIQARIRGNLLMAIANKFGRLLISTGN 407 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V++L W N+H L +IP S++ K Sbjct: 408 KSEMAVGYCTLYGDMNGGLAAIADVPKTRVYELCRWLNTH-TPPELEEHGIIIPDSVITK 466 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEES-----FINNDQEYNDETVRYVEHLL 522 PSAEL+P Q DQ+SLP Y +LDDI+ R V++ +S + D ++ V+ Sbjct: 467 PPSAELKPGQVDQDSLPDYDVLDDILYRYVDHHQSSQQIIAAGHPTAIVDRIIQMVKR-- 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +E+KRRQAP G KIT ++FG PI+ + Sbjct: 525 --AEFKRRQAPPGLKITDRAFGTGWRMPIAAR 554 >gi|332295837|ref|YP_004437760.1| NAD+ synthetase [Thermodesulfobium narugense DSM 14796] gi|332178940|gb|AEE14629.1| NAD+ synthetase [Thermodesulfobium narugense DSM 14796] Length = 552 Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 208/570 (36%), Positives = 301/570 (52%), Gaps = 48/570 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI I Q+NP++G+ N + A ++ DL++ E+ ++GYPP+DL+ + +F + Sbjct: 1 MKIVIGQVNPIIGNFEYNFKLIQDAYKKGLEVNADLVVLPEMVVTGYPPKDLLERDNFCK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYS 121 + + T D I+ G D+ G + N ++ II KI LP Y Sbjct: 61 RAFKYNELIVDLTKD--IPILFGSIQENDKVGRKIYNVGILAKNRKIIGCARKILLPYYD 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIW----------KN---SNICKHLKKQGA 168 F E R F G S I + + I ICED+W KN +CK+ KQ Sbjct: 119 VFDETRYFEPGDSPFFINIANKNILITICEDLWGLGKEGYLYGKNPIKDALCKNKDKQKI 178 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + +++ASPY++ K +R EI + ++YVN VG DELIFDGASF + Sbjct: 179 DLAINISASPYHYMKFNQRKEIFSNITKEFKFDLLYVNCVGANDELIFDGASFFMTSMGE 238 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE----EADYNACVLSLR 284 L + F E +Y+ D S L E E Y A V L+ Sbjct: 239 LRYLASFFEED--------------ISYLDTDIISFESHSLNENFDVTELMYKALVFGLK 284 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 +Y +K NF+ ++GLSGGIDS+L A IA DA G +NV +++ Y S +SLEDA +K Sbjct: 285 EYGKKTNFNGAVLGLSGGIDSSLTACIACDAFGSDNVMGLIMNSPYNSKESLEDALELSK 344 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + ++PI L+ + ++ + + EN+Q+RIRGN+LMA+SN +LL+ Sbjct: 345 NLNIRSVIIPIEPLMKSYDESLADIFKGYKKDVTEENLQARIRGNLLMAVSNKFGKLLLS 404 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGD++GG + D+YK V+++A W NS +VIP + Sbjct: 405 TGNKSEMAVGYTTLYGDLAGGLAVISDVYKEDVYKIARWINSK---------KKVIPERV 455 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEY--NDETVRYVEHLL 522 K PSAELRP Q DQE LPPY ILD I+K +E +S IN Y + TV V ++ Sbjct: 456 FIKKPSAELRPGQYDQEKLPPYEILDKILKLFIEEAKS-INEIISYGFDRNTVTEVVSMV 514 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 +EYKRRQAP K+T K+FG R YPI+ Sbjct: 515 IKNEYKRRQAPPTLKVTGKAFGYGRRYPIA 544 >gi|78213695|ref|YP_382474.1| NH(3)-dependent NAD(+) synthetase [Synechococcus sp. CC9605] gi|78198154|gb|ABB35919.1| NAD+ synthetase [Synechococcus sp. CC9605] Length = 561 Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 209/574 (36%), Positives = 311/574 (54%), Gaps = 41/574 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQLNPVVGD GN + A A Q ++L+L EL + GYPP D + + S IQ Sbjct: 1 MRIALAQLNPVVGDFEGNAKRILEAVRRAEEQAVELVLTPELSLWGYPPRDQLLEPSRIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIV-VGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYS 121 + + L + + +V P D + N VV+++ + K LP+Y Sbjct: 61 QQDTMLQWLVNQLNSSVTLLVGAALPASDARSPRLHNGVVLVNRLGWRPIAQKQLLPSYD 120 Query: 122 EFHEKRTFISGYSNDPIVF---RDIRLGILICEDIWKNSNICK----------HLKKQGA 168 F E+R F G+ P + RLG+ ICED+W + + + L + Sbjct: 121 VFDERRYFRPGHG--PCLLSLPNGKRLGLTICEDLWVDDGLQRERLDGPDPIDQLVPEQP 178 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQ 226 + + +L ASP+ K R ++ ++ P+IY+NQVGG DEL+FDGASF DG Sbjct: 179 DLVINLAASPFDAAKPALRQQLAAAAAQRLNCPLIYLNQVGGNDELVFDGASFVVGADGA 238 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST--MYIPLQEEEADYNACVLSLR 284 QL + ++ L+ W+ + + P+ E + A VL +R Sbjct: 239 VQLELPV-------------CEEHLAVWDSGHPTTVRSHGQIQPMDPIERLFRALVLGVR 285 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F + ++GLSGGIDSAL A IA ALG E V +++P ++S S++DA A A+ Sbjct: 286 DYARKCGFKQALLGLSGGIDSALVAVIATAALGNEAVSALLMPSPWSSSGSIDDALALAE 345 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + + +PI L+ + ++ L +P G+ AEN+QSRIRG++LMA++N +LLT Sbjct: 346 RLGLQTNTVPIAGLMEGYDQALTAPLGAKPQGVTAENLQSRIRGSLLMAVANQQGQLLLT 405 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS---HGITSGLGPLT--EV 459 T NKSE++VGY TLYGDM+GG + DLYKT VF L W +S G LG T E+ Sbjct: 406 TGNKSELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWLDSDAARGCRQALGLPTHGEL 465 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYV 518 + +I K PSAELRP+Q D +SLP Y LD ++K +++ +S +D V V Sbjct: 466 VGEAIRRKPPSAELRPNQKDSDSLPDYDALDALLKALIQERQSGPTLVAAGHDPALVERV 525 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 E LL +E+KRRQA K++ ++FG PI+ Sbjct: 526 ERLLKRAEFKRRQAAPLLKVSPQAFGSGWRLPIA 559 >gi|311742909|ref|ZP_07716717.1| NAD synthetase [Aeromicrobium marinum DSM 15272] gi|311313589|gb|EFQ83498.1| NAD synthetase [Aeromicrobium marinum DSM 15272] Length = 623 Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 213/598 (35%), Positives = 302/598 (50%), Gaps = 50/598 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ+N VVG I N+ A+ G L++ E+ ++GYP ED+ ++ + Sbjct: 36 VPQLRLALAQINAVVGAIDTNVELVLEQCRRAHAAGAHLVVTPEMVLTGYPIEDMAYRAT 95 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF----------PRQDQEGV-----LNSVVIL 103 FI A A+ L + G G +VVG D+ GV NS ++ Sbjct: 96 FITASQRAVAELAARLEADGLGELVVVVGHLDSAKPPTLEAVPDRLGVPKNAPTNSASVI 155 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 G I+ DK +LPNY F E R F++G + + + I ICEDIW++ Sbjct: 156 TGGRIVTRYDKHHLPNYGVFDEFRHFVAGDETQVVQVGGVDVAIAICEDIWQDGP-SAAA 214 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 + A L LN SPY K R E+ + + YVN VGGQDEL+FDG + Sbjct: 215 RAAEAGLLVVLNGSPYEAAKDDVRLELCARRAREGECAVAYVNLVGGQDELVFDGDTLVV 274 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ-------------LSQWNYMSDDSASTMYIPLQ 270 D +L + F + + L ++ + P Sbjct: 275 DAGGELLARAPQFETDLLVVDLDLPAATAPMPDPETRFHGLRVERHVVTSEPVPAFDPRP 334 Query: 271 EEEAD--------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ 322 AD Y A VL LRDYV KN F V++GLSGGIDS L AIAVDALG + V Sbjct: 335 SAIADRWDDLGERYQAVVLGLRDYVAKNGFTSVLMGLSGGIDSTLVGAIAVDALGADRVF 394 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI 382 + P ++S S DAA A+ G D +PI + F +L +Q + G+ EN+ Sbjct: 395 GVSNPSDWSSEHSRSDAAELARRTGLHLDTVPISPV---FDALQAQLSLD---GLAEENL 448 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 Q+RIR I M LSN ++L NKSE++ GY T+YGD GG+ P+KDL KT V+ LA Sbjct: 449 QARIRAVIWMGLSNQHGHLVLACGNKSELATGYSTIYGDAVGGYAPIKDLPKTLVWDLAR 508 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES 502 WRN+ G P IP + K PSAELRP Q D +SLPPY +LD I+ VE + Sbjct: 509 WRNAWSTERGETP---PIPEDTITKPPSAELRPGQLDTDSLPPYELLDAILDAYVERDLG 565 Query: 503 FINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +E ++ E V+ V L+ +EYKRRQ P G K++ ++FGRDR PI+N++R+ + Sbjct: 566 ATEVIEEGFDPELVQRVVTLVDRAEYKRRQYPPGPKVSRRNFGRDRRVPITNRWRESL 623 >gi|227537569|ref|ZP_03967618.1| NAD(+) synthase [Sphingobacterium spiritivorum ATCC 33300] gi|227242571|gb|EEI92586.1| NAD(+) synthase [Sphingobacterium spiritivorum ATCC 33300] Length = 546 Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 195/563 (34%), Positives = 302/563 (53%), Gaps = 31/563 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +G+ N + A Q DLI+F EL I GYP +DL+ FIQ Sbjct: 1 MKIALAQLNYHIGNFEKNNSAIIHTITRAKEQQADLIIFAELAIGGYPAKDLLRNAVFIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP--RQDQEG--VLNSVVILDAGNIIAVRDKINLPNY 120 C+ AID + ++ HD ++G P D EG + N V + G + + K LP+Y Sbjct: 61 NCADAIDLIAANCHD--IACIIGAPIRNTDPEGKSLYNGAVFIQDGKVSHISKKGLLPDY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-------S 173 F E R F + F+ + + +CED+W + + ++ E L + Sbjct: 119 DVFDEYRYFEPSRHFNCFKFKGETIALTVCEDLWDDDSSNSYVGDPMEELLLEKPSLIVN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + + R ++ Q++ + P++YVNQVG ++IFDG S + ++ ++ Sbjct: 179 IAASPFSYTHFENRLTVLRKQVARANCPLLYVNQVGAHMDIIFDGRSLALNKGGEIVREL 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F E + + +S + ++ I + A +L LRDY K+ F Sbjct: 239 GKFEEDLQVVTFENGDLVSTNSSITSGHTEIALI--------HEALILGLRDYFLKSGFK 290 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K +GLSGG+DSA+ AA+A +A+G ENV I++P Y+S SL+DA K GC + ++ Sbjct: 291 KATLGLSGGLDSAVVAALACEAIGAENVLAILMPSVYSSNHSLKDALDLVKNAGCTHHII 350 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI D+ F +S+ + ENIQ+R RG +LMA+SN ++L TSNKSE +V Sbjct: 351 PIKDVAQAFEGTLSKAFEGLQPDTTEENIQARTRGTLLMAISNKLGHIVLNTSNKSEAAV 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM+G + + D+YKTQ + LA + N E+IP + + K PSAEL Sbjct: 411 GYGTLYGDMAGSISVIGDVYKTQAYDLAKYINRE---------REIIPQNTIIKPPSAEL 461 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQA 532 RP Q D +SLPPY ILD ++ +++E E+S + DE V + L+ +E+KR QA Sbjct: 462 RPDQKDSDSLPPYDILDAVLYQLIELEKSGSEVVKTGFDEALVLRISKLVNNAEFKRFQA 521 Query: 533 PVGTKITAKSFGRDRLYPISNKF 555 P +++ K+FG R P+ K+ Sbjct: 522 PPILRVSPKAFGSGRSMPLVAKY 544 >gi|94264028|ref|ZP_01287828.1| NAD(+) synthase (glutamine-hydrolyzing) [delta proteobacterium MLMS-1] gi|93455539|gb|EAT05726.1| NAD(+) synthase (glutamine-hydrolyzing) [delta proteobacterium MLMS-1] Length = 581 Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 215/591 (36%), Positives = 298/591 (50%), Gaps = 46/591 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +KIA+ Q+NPV+GD A N K A G L + EL +SGYPP DL+ + + Sbjct: 4 VAAMKIALLQINPVIGDFAANARKIVDGCGRAAAAGCQLAILPELALSGYPPRDLLERPA 63 Query: 62 FIQACSSAIDTLKSDTHDGG--AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F A++ L D G G V P + +G+ N+ ++ G I+A K LP Sbjct: 64 FRAEHQRALEDLVRQITDIGVLCGAFVAHP-EAGKGLANAALLFAGGEILATVGKRLLPA 122 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI----------------CKHL 163 Y F E R F G P FR + LGI ICEDIW C+ + Sbjct: 123 YDVFDESRYFRPGPPVAPCRFRGVNLGITICEDIWNMEGAAVPPADPRGGLPPAYDCEPV 182 Query: 164 KK-------QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 ++ QG + L ++ ASP+ K R E++ G + LP+ VNQVGGQD LIF Sbjct: 183 RELVAAAGEQGIDLLVNIAASPFTVGKDAFREELLAGIATRYRLPVALVNQVGGQDSLIF 242 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD- 275 DG S + + F+E + + + + S E +D Sbjct: 243 DGGSLALAADGRPLVKAARFAEDLVVLDLDNKKNKKGSDPFSPGGGKKA----TEMGSDP 298 Query: 276 -----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 A L RDYV K F +V+IGLSGG+DSAL AAIA ALG E V + +P Y Sbjct: 299 FLAEIMAALELGTRDYVHKCGFGRVVIGLSGGLDSALTAAIAARALGPEQVLGVAMPSPY 358 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 ++ SLEDA A A LG ++ LPI + F + ++ L E + +N+Q+RIRGN+ Sbjct: 359 SAAASLEDARALAVNLGIEFAELPIATARDTFLTTLAPLLGEVSGELTDQNLQARIRGNL 418 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMA++N +LL T NKSE++VGY TLYGDM G L D+YKT V+ LA W N Sbjct: 419 LMAIANQQGRLLLATGNKSELAVGYCTLYGDMCGALAVLADVYKTVVYDLAGWLNRK--- 475 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE- 509 E+IP +E+ PSAEL P Q D + LPPY ILD I++ +E + Q Sbjct: 476 ------RELIPARTIERPPSAELAPEQRDDDELPPYEILDPILQAHLEEQLPATAIVQRG 529 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 + V V + + +EYKR+QAP KITAK+FG YPI+ + + I+ Sbjct: 530 HEPAVVADVINRVRLNEYKRQQAPPALKITAKAFGPGWRYPIAANYSERIN 580 >gi|318042265|ref|ZP_07974221.1| carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. CB0101] Length = 565 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 217/577 (37%), Positives = 321/577 (55%), Gaps = 43/577 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD+AGN A+ +A + A QG DL++ EL + GYPP DL+ + + Q Sbjct: 1 MRLALAQINPLVGDLAGNGAQLLKACQAAAAQGADLVVAPELALWGYPPRDLLLRPALHQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIV-VGFPRQD--QEGVLNSVVILDAGNIIAVRDKINLPNYS 121 +D L +D +G A ++ V P D Q + NS ++ G V K LP+Y Sbjct: 61 QQQHTLDHLAADLPEGLALLLGVSEPAGDGQQPDLFNSAALVVRGGWRIVARKRLLPSYD 120 Query: 122 EFHEKRTFISGYSNDPIVF------RDIRLGILICEDIWKNSNI----------CKHLKK 165 F E+R F +++P + R RLG+ ICED+W + L+ Sbjct: 121 VFDERRYFRP--ADEPCLLELERGGRHWRLGLSICEDLWVEEELHPQRLLGADPVAELQA 178 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 G + L +L+ASP+ K + R E+ +H P++YVNQVGG DEL+FDG SF Sbjct: 179 LGPDLLINLSASPFGDGKAQLRRELAAAAARRLHCPVVYVNQVGGNDELVFDGGSFVTTA 238 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 ++A Q+ F++ + W S S A+ +P + +E VL +RD Sbjct: 239 HGEVACQLA-FAKTDLGV-WD-----STCGSPSAGRAAGAVLP-KPDELLLRTLVLGVRD 290 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y +K F K ++GLSGGIDSAL A IA ALG +NVQ +++P ++S S+ D+ A A Sbjct: 291 YARKCGFRKALLGLSGGIDSALVAVIAAAALGPDNVQALLMPSPWSSAGSINDSLALADR 350 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG + I L+ F + ++ L P+G+ AEN+QSRIRG +LMA++N +LLTT Sbjct: 351 LGMATHTVAIEALMTSFDAALTPPLGGAPAGLTAENLQSRIRGTLLMAVANQQGQLLLTT 410 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVI 460 NKSE++VGY TLYGDM+GG + DLYKT VF+L +W +S + GL E++ Sbjct: 411 GNKSELAVGYCTLYGDMNGGLAVIGDLYKTGVFRLCAWLDSEAAATCRQEMGLPTHGELV 470 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES-----FINNDQEYNDETV 515 +I +K PSAELRP Q D +SLP Y +LD +++ ++E +S D+ D Sbjct: 471 GRAIRDKPPSAELRPDQQDSDSLPDYAVLDPLLQALLEQHQSPEELVATGVDRALADR-- 528 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 V LL +E+KRRQAP K+ +SFG PI+ Sbjct: 529 --VMQLLRRAEFKRRQAPPVLKLGQRSFGSGWRMPIA 563 >gi|81298916|ref|YP_399124.1| NAD synthetase [Synechococcus elongatus PCC 7942] gi|81167797|gb|ABB56137.1| NH(3)-dependent NAD(+) synthetase [Synechococcus elongatus PCC 7942] Length = 574 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 217/581 (37%), Positives = 318/581 (54%), Gaps = 38/581 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQLNP +GD+ GN EA + G L+L EL + GYPP DL+ F+ Sbjct: 1 MKLAIAQLNPTIGDLTGNTQAIVAVAREAQQAGARLLLTPELSLCGYPPRDLLLLPDFLA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-QEGV------LNSVVILDAGNIIAVRDKIN- 116 A + ++ L + A ++VG P + Q G+ N V+++ G I RD+ Sbjct: 61 AIADQLEQLCREAPKDIA-LLVGAPLPNPQAGIEGGKPLFNGAVLIENGEI---RDRFYK 116 Query: 117 --LPNYSEFHEKRTFISG---YSNDPIVFRDIRLGILICEDIWKN----------SNICK 161 LP Y F E R F SG + + +R+G+ ICED+W S+ Sbjct: 117 QLLPTYDVFDEDRYFQSGQGGWFDLQAEGETLRVGVSICEDLWNEPEFWGERRYESDPIA 176 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + L +L+ASPY K K R ++ +P++Y NQVGG D+LIFDG SF Sbjct: 177 ALVADQIDLLVNLSASPYCFGKPKLREALLRHTCRRYQIPLLYANQVGGNDDLIFDGNSF 236 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACV 280 + ++ + KH + + +W QQ+ Q + AS Q++ A+ + V Sbjct: 237 VLNAAGEVLQRGKHCQAELLIVDW---QQI-QLAPATTAIASPSLTESQQDLAELWEVLV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L LRDY +K F +++GLSGGIDSAL AA+A A+ ENV I++P Y+S S+ DA Sbjct: 293 LGLRDYTRKCGFKSIVLGLSGGIDSALVAALAAAAIEAENVLAILMPSPYSSDHSITDAI 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A A+ L +++ + I L+ F +S + ENIQSRIRG +LMA +N + Sbjct: 353 ALAENLQIRHETIAIAPLMTAFEHSLSDLFAGRSPDVTEENIQSRIRGTLLMAAANKLGS 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG---ITSGLGPL- 456 +L+TT NKSE++VGY TLYGDM+GG + DL KT V+QL W NS + S P Sbjct: 413 LLVTTGNKSELAVGYCTLYGDMNGGLAAIADLPKTWVYQLCHWLNSEAAAEVRSQHFPQA 472 Query: 457 -TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDET 514 TE+IP SIL K+PSAELRP Q DQ+SLP Y +LDDI+ R++E +S ++ E Sbjct: 473 PTEIIPDSILTKAPSAELRPDQVDQDSLPDYAVLDDILVRLIEKHQSRKEILAAGHSSEV 532 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + V L+ +E+KR+QA G K++ ++FG PI+ ++ Sbjct: 533 LDKVLGLVRRAEFKRKQAAPGLKVSDRAFGTGWRMPIACRW 573 >gi|332702582|ref|ZP_08422670.1| NAD+ synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332552731|gb|EGJ49775.1| NAD+ synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 551 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 207/573 (36%), Positives = 306/573 (53%), Gaps = 42/573 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+ +++ + QLNP VGDI GN A+ +A A QG L L +E+ ++GYPP DL+ Sbjct: 1 MVLAMRLGLIQLNPTVGDIEGNAARIEQAVRRATAQGARLCLTSEMALTGYPPRDLLLFG 60 Query: 61 SFIQACSSAIDTLKSDTHDGG---AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 SF++ + A++ L + G V P + + N+ V+L G + K L Sbjct: 61 SFVRRVTEALEDLARRLANEAPVLVGTVEANPGPCGKLLRNAAVLLGGGRVRHSFHKTLL 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNI----------CKHLKK 165 P Y F E R F S +P +F +R+ + +CEDIW + + + L Sbjct: 121 PTYDVFDESRYFEP--SQEPKLFELDGLRMAVTVCEDIWNDKDYWPRRNYAFDPLEALAS 178 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 Q + + +L+ASP++ K +R ++ P+ YVNQVGG D+LIFDG S FD Sbjct: 179 QAPDVILNLSASPFHLGKQAERERMLAAISRKYKAPLAYVNQVGGNDDLIFDGRSTVFDS 238 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP--LQEEEADYNACVLSL 283 Q ++ ++ F+E + +AS + +P L A V+ Sbjct: 239 QGRILARLAAFAEDVAVVNL---------------AASPVPLPADLSGPADALEALVMGT 283 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY +K F ++GLSGGIDSAL AA+A ALG +NV +++P Y+S S++D+ A Sbjct: 284 RDYARKCGFKSALLGLSGGIDSALTAAVAARALGPDNVLGVLMPSPYSSRGSIDDSLELA 343 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + LG + LPI L+ F + + + + ENIQSRIRGN+LMALSN +MLL Sbjct: 344 RNLGLRTLTLPIAPLMAAFEQTLEEPFRGLCPDVTEENIQSRIRGNLLMALSNKYCSMLL 403 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY T+YGDMSGG + D KT V+ ++ N+ T +IP S Sbjct: 404 TTGNKSELAVGYCTIYGDMSGGLAVISDAPKTLVYAMSRQLNADSPTP-------IIPES 456 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL K PSAELRP Q DQ+SLPPY +LD I+ +E +++ TV V L+ Sbjct: 457 ILTKPPSAELRPGQVDQDSLPPYDVLDAILALHIEEHRGLEEIVAAGFDEPTVHRVLKLV 516 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +E+KRRQA G +IT ++FG PI+ ++ Sbjct: 517 AIAEFKRRQAAPGLRITRRAFGTGWRMPIARRW 549 >gi|218510739|ref|ZP_03508617.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli Brasil 5] Length = 259 Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 161/259 (62%), Positives = 198/259 (76%), Gaps = 1/259 (0%) Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V Sbjct: 1 GGIDSAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVT 60 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYG Sbjct: 61 GFSSALSDLFEGTDSGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYG 120 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNP+KDLYK QV+ L+ WRN + S LGP EVIP +I++K+PSAELRP Q DQ Sbjct: 121 DMNGGFNPIKDLYKMQVYALSRWRNENVPPSALGPSGEVIPQNIIDKAPSAELRPDQKDQ 180 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYP+LDDI++ +VE E + +D TV VEHLLY +EYKRRQ+ G KIT Sbjct: 181 DSLPPYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKIT 240 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 241 KKNFGRDRRYPITNRFRDR 259 >gi|226328040|ref|ZP_03803558.1| hypothetical protein PROPEN_01931 [Proteus penneri ATCC 35198] gi|225203744|gb|EEG86098.1| hypothetical protein PROPEN_01931 [Proteus penneri ATCC 35198] Length = 422 Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 182/429 (42%), Positives = 253/429 (58%), Gaps = 20/429 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKAR---RAREEANRQGMDLILFTELFISGYPPEDLV 57 M +KLK+A+AQLN VVGDI GN + +A+EEA DL++F+EL + GY PEDL+ Sbjct: 11 MSRKLKLAMAQLNWVVGDIEGNCERMLSTIKAQEEA-----DLVMFSELALCGYSPEDLL 65 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F+ F Q C + + L+ + IVVG P + N++ G + A K L Sbjct: 66 FRPDFQQRCETQLTRLEQASKK--TAIVVGHPWWQNGKIYNALSFFYKGELQARYFKQQL 123 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F EKR F G + F+ LG+LICEDIW N I LK+ GA+ + S+NAS Sbjct: 124 PNYGVFDEKRYFQQGNERCVVPFKGYHLGLLICEDIWINEPI-DALKQAGADLVLSINAS 182 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K R +++ HLP+IY+NQ+GGQDEL+FDG S FD + + ++ F Sbjct: 183 PYNREKPHVRTQLIKEHCQRTHLPVIYLNQIGGQDELVFDGCSKVFDERGAITHRLAAFD 242 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 EQ + E+ + N + + PL + Y A VL+ RDYV KN F I+ Sbjct: 243 EQTTIVEF------DELNIIPMVDPAPELSPLAQV---YQALVLATRDYVIKNGFKGAIL 293 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDS L AIA DALGKE+VQ +M+P++YTS S+ DA A LG ++D + I Sbjct: 294 GLSGGIDSGLTVAIAADALGKESVQAVMMPFRYTSEMSIHDAKEQADLLGVEFDTVSIEP 353 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + F + ++ ++ + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY T Sbjct: 354 MFDAFMAQLAPMFKDTAADTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYST 413 Query: 418 LYGDMSGGF 426 LYGDM+GGF Sbjct: 414 LYGDMAGGF 422 >gi|148240345|ref|YP_001225732.1| glutamine-dependent NAD(+) synthetase [Synechococcus sp. WH 7803] gi|147848884|emb|CAK24435.1| glutamine-dependent NAD(+) synthetase [Synechococcus sp. WH 7803] Length = 577 Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 218/581 (37%), Positives = 314/581 (54%), Gaps = 39/581 (6%) Query: 5 LKIAIAQLNPVVGDIAGN---IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++IA+AQ+NPVVGD+ GN I A A E + DL++ EL + GYPP DL+F + Sbjct: 1 MRIALAQINPVVGDLLGNADRIHAALAATEVNGKVSADLLVTPELSLWGYPPRDLLFSAA 60 Query: 62 FIQACSSAIDTLKSDTHDG--GAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKI 115 ++ A+D L+ H ++VG P Q + N++ ++ A V K Sbjct: 61 HLEQQQQALDQLQQRLHAEQLDVALLVGVAEVAPDQQHPRLFNALALVQARGWQVVARKQ 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNSNI----------CK 161 LP+Y F E R F + S + R D +LG+ ICED+W + + Sbjct: 121 LLPSYDVFDETRYFRASSSPSTLSLRVNNRDWQLGLSICEDLWVDEELHGQRLVGPDPIA 180 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + + L + +ASP+ K RHE+ + P++YVNQVGG DELIFDGASF Sbjct: 181 SLIPERLDALINCSASPFSRRKGTLRHELAARAAERLQCPVVYVNQVGGNDELIFDGASF 240 Query: 222 CF-DGQQQLAFQMKHFS-EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 G Q+ F+ T +L Q + A+T P + EA + Sbjct: 241 VIAPGDDTPLLQLPEFAVSTEVWTAASSTDRLEQ-PSRAHQQANT---PDDDLEALFRGL 296 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V ++DY K F ++GLSGGIDSAL A IA ALG ++VQ++++P ++S S+ DA Sbjct: 297 VTGVKDYATKCGFKAALLGLSGGIDSALVAVIAAAALGPDHVQSLLMPSPWSSSGSIADA 356 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A A LG ++PI L+ F + ++ L EPSGI AEN+QSRIRG +LMA++N Sbjct: 357 LALATRLGIASQIVPIQTLMEGFEATLTPALNAEPSGITAENLQSRIRGTLLMAMANQQG 416 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLG 454 +LL+T NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + GLG Sbjct: 417 QLLLSTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFALCHWLDSPDAGACRAELGLG 476 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYN 511 +I +ILEK PSAELRP Q D +SLP Y LD ++ ++E E I + + Sbjct: 477 GSGPLIGQAILEKPPSAELRPDQKDSDSLPDYERLDPLLMDLIEQRMSGEQLIGAGHDPD 536 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 D V+ +E L +E+KRRQAP K++ ++FG PI+ Sbjct: 537 D--VKRIERLFRRAEFKRRQAPPLLKVSKQAFGSGWRLPIA 575 >gi|56751408|ref|YP_172109.1| NAD synthetase [Synechococcus elongatus PCC 6301] gi|56686367|dbj|BAD79589.1| glutamine-dependent NAD(+) synthetase [Synechococcus elongatus PCC 6301] Length = 574 Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 215/578 (37%), Positives = 316/578 (54%), Gaps = 32/578 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQLNP +GD+ GN EA + G L+L EL + GYPP DL+ F+ Sbjct: 1 MKLAIAQLNPTIGDLTGNTQAIVAVAREAQQAGARLLLTPELSLCGYPPRDLLLLPDFLA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-QEGV------LNSVVILDAGNIIAVRDKINL 117 A + ++ L + A ++VG P + Q G+ N V+++ G I K L Sbjct: 61 AIADQLEQLCREAPKDIA-LLVGAPLPNPQAGIEGGKPLFNGAVLIENGEIRDRFYKQLL 119 Query: 118 PNYSEFHEKRTFISG---YSNDPIVFRDIRLGILICEDIWKN----------SNICKHLK 164 P Y F E R F SG + + +R+G+ ICED+W S+ L Sbjct: 120 PTYDVFDEDRYFQSGQGGWFDLQAEGETLRVGVSICEDLWNEPEFWGERRYESDPIAALV 179 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + L +L+ASPY K K R ++ +P++Y NQVGG D+LIFDG SF + Sbjct: 180 ADQIDLLVNLSASPYCFGKPKLREALLRHTCRRYQIPLLYANQVGGNDDLIFDGNSFVLN 239 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSL 283 ++ + KH + + +W QQ+ Q + AS Q++ A+ + VL L Sbjct: 240 AAGEVLQRGKHCQAELLIVDW---QQI-QLAPATTAIASPSLTESQQDLAELWEVLVLGL 295 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY +K F +++GLSGGIDSAL AA+A A+ ENV I++P Y+S S+ DA A A Sbjct: 296 RDYTRKCGFKSIVLGLSGGIDSALVAALAAAAIEAENVLAILMPSPYSSDHSITDAIALA 355 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + L +++ + I L+ F +S + E+IQSRIRG +LMA +N ++L+ Sbjct: 356 ENLQIRHETIAIAPLMTAFEHSLSDLFAGRSPDVTEEDIQSRIRGTLLMAAANKLGSLLV 415 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG---ITSGLGPL--TE 458 TT NKSE++VGY TLYGDM+GG + DL KT V+QL W NS + S P TE Sbjct: 416 TTGNKSELAVGYCTLYGDMNGGLAAIADLPKTWVYQLCHWLNSEAAAEVRSQHFPQAPTE 475 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRY 517 +IP SIL K+PSAELRP Q DQ+SLP Y +LDDI+ R++E +S ++ E + Sbjct: 476 IIPDSILTKAPSAELRPDQVDQDSLPDYAVLDDILVRLIEKHQSRKEILAAGHSSEVLDK 535 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V L+ +E+KR+QA G K++ ++FG PI+ ++ Sbjct: 536 VLGLVRRAEFKRKQAAPGLKVSDRAFGTGWRMPIACRW 573 >gi|296130694|ref|YP_003637944.1| NAD+ synthetase [Cellulomonas flavigena DSM 20109] gi|296022509|gb|ADG75745.1| NAD+ synthetase [Cellulomonas flavigena DSM 20109] Length = 621 Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 207/616 (33%), Positives = 306/616 (49%), Gaps = 71/616 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQL VGD+AGN A A D++L E+ + GYP EDL+ + Sbjct: 1 MTTLRVALAQLPVRVGDMAGNATALTHAVATAGSWQADVVLTPEMGVCGYPVEDLLAEPE 60 Query: 62 FIQACSSAIDTLKSDTH---------------DGGAGIVVGFPRQD--QEGVLNSVVILD 104 F++A +A + T G AG D + G+ N V+ Sbjct: 61 FVRAAMAATQQVARSTDRTVALLGAPWVTGSLPGAAGARPAGSATDTRERGLRNVAVVAQ 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSND----------PIVFRDIRLGILICEDIW 154 G + K LP YS F + R +G + P+ F G+L+CED+W Sbjct: 121 GGQVHGAHAKTLLPTYSVFDDARHVEAGPAQQDLYRVLTPEGPVTF-----GVLVCEDVW 175 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL 214 ++ + + +++ GA+ + LNASPY+ K + R V +PI YVN VGGQDEL Sbjct: 176 SDA-LVQEVRRGGAQAVVVLNASPYHVGKQRLREAAVAAAARSAGVPIAYVNAVGGQDEL 234 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLS-QWNYMSDDSAST--------- 264 +FDG SF DG + + + F+ + ++ W+ + T Sbjct: 235 VFDGGSFAVDGDGVVVARGRSFATDLVTVDLPVAAEVDPSWDVVDLGVTHTERCPLPPPP 294 Query: 265 MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 + P + + Y A V RDY + +V++GLSGGIDSAL A IAVDALG + V + Sbjct: 295 LTAPREVHDEVYTALVTGFRDYCTRVGLPQVVLGLSGGIDSALAATIAVDALGPDAVWGV 354 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG----IVAE 380 +P Y+S S++DA A A LG ++DV+PI D +++ L + + E Sbjct: 355 GMPGPYSSGGSVDDARALADNLGIRFDVVPITDAYLERHRVLAGLLTDRTGATGQPVAWE 414 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG-GFNPLKDLYKTQ--- 436 N+Q+R+RG LM L+N + A++ TT N+SE +VGY TLYGD G NPL DL KT Sbjct: 415 NLQARLRGTTLMTLANATGALVCTTGNRSESAVGYFTLYGDSCGTAPNPLGDLLKTTVTL 474 Query: 437 --------VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPI 488 V+ LA WRN +G P IP + L K SAEL P Q D +SLPPYP+ Sbjct: 475 RDGTVLPGVYGLAQWRNDRAAAAGQAP---PIPAATLTKPASAELAPGQQDSDSLPPYPV 531 Query: 489 LDDIIKRIVENEE-------SFINN--DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 LD ++ +E+ S + + D + TV V L+ SE+KRRQ P+ K++ Sbjct: 532 LDRLLLAFLEDHASARELAGSLVADGWDPQAAAGTVDRVLTLVDRSEFKRRQVPIRIKVS 591 Query: 540 AKSFGRDRLYPISNKF 555 +FGRDR P++N + Sbjct: 592 RLAFGRDRRMPLANHW 607 >gi|148242969|ref|YP_001228126.1| glutamine-dependent NAD(+) synthetase [Synechococcus sp. RCC307] gi|147851279|emb|CAK28773.1| glutamine-dependent NAD(+) synthetase [Synechococcus sp. RCC307] Length = 558 Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 212/568 (37%), Positives = 312/568 (54%), Gaps = 33/568 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q NP+VGD+ GN + ++ +A G +L L EL + GYPP DL+ + + Q Sbjct: 1 MRIALIQSNPLVGDLQGNRQRLQQQCLQAAEAGAELALAPELALWGYPPRDLLLQPALRQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S G G+++G + + N++ +++ G V K LP+Y F Sbjct: 61 Q-QDRQLDQLSGALPPGFGLLLGVVETSGQKLFNAMALVERGGWRLVARKRLLPSYDVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIW-------KNSNIC---KHLKKQGAEFLFSL 174 E+R F SG + + RLG+ +CED+W +N+ +C L+ + L +L Sbjct: 120 EQRYFHSGDQPALLSWGGQRLGLTLCEDLWVEPQISGRNAPLCDPIAELQPLKPDLLINL 179 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 +ASP+ K ++R ++ + P++YVNQVGG DELIFDG SF D L Q+ Sbjct: 180 SASPFGQGKAERRRQLAGAAQQRLGCPVLYVNQVGGNDELIFDGNSFVLDATGALQQQLP 239 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 + L W+ S S T PL E + VL ++DY +K F K Sbjct: 240 CG-----------ESALQIWDSQSATS-PTPPEPLSPEAQLWRMLVLGVQDYARKCGFRK 287 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++GLSGGIDSAL AA+AV ALG + V+ +++P Y+S SL+D+ A A L +P Sbjct: 288 ALLGLSGGIDSALVAALAVAALGSQQVRALLMPSPYSSEGSLQDSLALASRLNLATSTVP 347 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I L+ + S + L ++P GI AEN+QSRIRG +LMA++N +LL T NKSE++VG Sbjct: 348 IEPLMQQYDSSLDPALGQKPEGITAENLQSRIRGTLLMAVANSEGQLLLATGNKSELAVG 407 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVIPPSILEKSP 469 Y TLYGDM+GG + DLYK++VF+L W +S GL VI +IL K P Sbjct: 408 YCTLYGDMNGGLAVIGDLYKSEVFRLTRWLDSPAAAGERQRCGLPADGPVIGDAILNKPP 467 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLLYGSE 526 SAELRP Q D +SLP YP LD +++R +E + E I + + + V+ + LL SE Sbjct: 468 SAELRPDQKDSDSLPDYPYLDRLLQRFIEEHASPEELIASGEP--SDAVQRIWRLLKRSE 525 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNK 554 +KRRQA K++A+SFG PIS + Sbjct: 526 FKRRQAAPVLKLSARSFGCGWRMPISAR 553 >gi|330507845|ref|YP_004384273.1| glutamine-dependent NAD(+) synthetase [Methanosaeta concilii GP-6] gi|328928653|gb|AEB68455.1| glutamine-dependent NAD(+) synthetase [Methanosaeta concilii GP-6] Length = 550 Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 218/568 (38%), Positives = 311/568 (54%), Gaps = 43/568 (7%) Query: 5 LKIAIAQLNPVVGDIAGN---IAKA-RRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 +KIA+ QLNP +GD+AGN IA+A RRA + DL + +EL + GYPP DL+ + Sbjct: 1 MKIALLQLNPTIGDLAGNKGLIARAIRRAPD------FDLAVTSELALLGYPPCDLLLNE 54 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKIN 116 F++ A+D L + D ++VG + + + NS ++ G + K Sbjct: 55 EFVERSWQALDELAEELADLPP-VLVGQAEPNTSAGERPLFNSAALIRDGKVTETFQKSM 113 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN--------ICKHLKKQGA 168 L FHE R F G + LGILI E + +S+ L+ +GA Sbjct: 114 LSGCDLFHEDRYFQPGKEARLLQIEGQSLGILIGELLLGSSDNERQDRPDPIAELRAKGA 173 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + + +L+ASP+ K R ++ LPI+ VNQVGG D+LIFDG S FD + Sbjct: 174 DAIVNLSASPFTAGKQLLREARLSDLAKKHCLPILSVNQVGGNDDLIFDGRSCFFDAAGR 233 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 L + + F E + + +++ +DD I + A VL RDYV Sbjct: 234 LIARGRGFEEDIIVADLDEPKEI----IAADDFTFEAEI--------WRALVLGTRDYVH 281 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K F V++GLSGGIDS+L AAIAV ALG NV ++LP YT S++DA A A LG Sbjct: 282 KCGFSSVLLGLSGGIDSSLVAAIAVQALGPNNVLGVLLPSPYTRQSSIDDALALAANLGI 341 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 K + + D++ F +++ P I ENIQ+RIR +LMALSN ++LL T N+ Sbjct: 342 KTISILLTDIMGSFELELAEHFAGRPKDITEENIQARIRATLLMALSNKYGSILLATGNR 401 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE+SVGY T+YGDM+GG + DL KT V+++A W NS VIPPSI++K Sbjct: 402 SELSVGYCTIYGDMAGGLAVISDLPKTMVYRIAEWLNSTASKP-------VIPPSIIKKP 454 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEY 527 PSAELRP QTDQ+SLPPYP+LD+I+KR ++ +S + + DE TV V L+ +E+ Sbjct: 455 PSAELRPGQTDQDSLPPYPLLDEILKRYIDEHQSRADLLRAGLDEVTVDRVISLVKNAEF 514 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KR QA +G K+ KSFG P++ + Sbjct: 515 KRVQAALGLKVIDKSFGEGWRMPVACRI 542 >gi|298530532|ref|ZP_07017934.1| NAD+ synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298509906|gb|EFI33810.1| NAD+ synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 550 Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 206/565 (36%), Positives = 311/565 (55%), Gaps = 36/565 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + QLNPVV D GN +A EA+ QG D+ + EL + GYP DL+ ++ ++ Sbjct: 1 MKIGLLQLNPVVCDFEGNARGIVQACMEASGQGADICVTPELAVIGYPARDLLLREDILE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 C ++ + +T G +++G FP + E V NS +LD G +I V K+ LP Y Sbjct: 61 KCMQSVRFIARETSGVGP-LLLGSPWCFPGRTGE-VYNSACLLDKGRVIKVFSKVLLPEY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEF 170 F EKR F + + ++ +G+ ICED W + N + L +QGA+ Sbjct: 119 DVFDEKRYFCAAEAPGVFEYKGKVVGVSICEDAWNDEDFWDRPRGGVNPMQELARQGADI 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +++ASP+ K R ++ + I+ NQVGG D+L+F G S F + Sbjct: 179 IINMSASPFGLGKHGIRQAMMGSLAVKHRVFFIFCNQVGGFDDLVFPGRSMVFGPDGSIM 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + + F F+ + + SD + +P + + A VL RDYV+K+ Sbjct: 239 GRGREFERDVFVFDTSNPAK-------SDSHEHDLDVPAEA----WRALVLGTRDYVRKS 287 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++GLSGG+DSAL AA+A ALG ENV +++P ++SP S++D+ A++LG K Sbjct: 288 GFSRVLLGLSGGMDSALTAAVAASALGPENVTGVLMPSPHSSPGSIDDSMKLAESLGIKT 347 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 LPI L+ F + + ENIQSRIRGN+LMA+SN MLL T NKSE Sbjct: 348 VTLPISSLMQGFDQALEDVFSGMHPDVTEENIQSRIRGNLLMAMSNKWGDMLLNTGNKSE 407 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY T+YGDM+G L D+ KT V+ +A W ++ G GP +IP +I+ K PS Sbjct: 408 LAVGYCTIYGDMAGSLAVLADVPKTLVYDIARWLSTKG-----GP---IIPEAIINKPPS 459 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELRP Q D++SLP Y ILD+I++ VE S + + + V+ V ++ SE+KR Sbjct: 460 AELRPGQKDRDSLPEYDILDEILRLYVEKGASMQEICTRGFEADVVQKVLDMVNRSEFKR 519 Query: 530 RQAPVGTKITAKSFGRDRLYPISNK 554 QAP G KIT +FG R P++++ Sbjct: 520 YQAPPGIKITDVAFGPGRRMPLASR 544 >gi|326802565|ref|YP_004320384.1| NAD+ synthetase [Sphingobacterium sp. 21] gi|326553329|gb|ADZ81714.1| NAD+ synthetase [Sphingobacterium sp. 21] Length = 547 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 202/565 (35%), Positives = 310/565 (54%), Gaps = 40/565 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IAIAQ N +G+ N K EA R+G DL++F E+ I GY +DL +SF+ AC Sbjct: 3 IAIAQTNYHIGNFERNTEKIIATIAEAKRKGADLVVFPEITIGGYLAKDLFRYRSFLDAC 62 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 ++I+ + + G ++G P + + + + N+ + + G + K LP+Y Sbjct: 63 ETSIEQIAASCV--GIACIIGAPVRSKLTKGKQLYNAALFIVDGAVKDTVHKTLLPDYDV 120 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-------SNICKHLKKQGAEFLFSLN 175 F E R F + + ++ R+ + ICED+W + L KQ + ++ Sbjct: 121 FDEYRYFEPNNTFKCVDYKGNRIALTICEDLWNEHFPSLYPQDPMIELAKQQPNIMINVA 180 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 ASP+ + + R +VT LP +YVN +G ++IFDG S FD + +L + Sbjct: 181 ASPFSESHFEARCAVVTAHSKRHALPALYVNTIGAHADIIFDGRSLVFDEKAKLIDVLNP 240 Query: 236 FSEQNFMTEWHYDQQLSQWN--YMSDDSASTMYIPLQEEEADYN---ACVLSLRDYVQKN 290 F+E D + Q N + +T+Y +E E+ N A VL ++D+ K+ Sbjct: 241 FAE---------DLRYYQLNGKELVARQLTTVY---KEPESIVNIHEALVLGIKDFFAKS 288 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F K I+GLSGGIDSA+ AA+A +ALG NV +++P Y++ S++DA LGC + Sbjct: 289 GFKKAILGLSGGIDSAVVAALACEALGSTNVMGVLMPSIYSTGHSVDDAMDLVGNLGCLH 348 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +V+PI + F ++M++ + + + I ENIQ+R+R +LMA+SN +LL TSNKSE Sbjct: 349 EVIPIKEATEAFDNMMAKAFKGKENDITEENIQARVRAIVLMAMSNKHGYILLNTSNKSE 408 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +VGYGTLYGDM+G + D+ KT+V+QLA + N +GI VIP + + K+PS Sbjct: 409 AAVGYGTLYGDMAGSLGVIGDVLKTKVYQLAHYINRNGI---------VIPENTITKAPS 459 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKR 529 AELRP Q D +SLP Y +LD I+ R VE E S + DE V+ V L+ GSE+KR Sbjct: 460 AELRPDQKDSDSLPEYNVLDAILHRYVELEMSSKEIIADGFDEALVQRVIKLVVGSEFKR 519 Query: 530 RQAPVGTKITAKSFGRDRLYPISNK 554 Q+P ++T K+FG R P+ K Sbjct: 520 FQSPPILRVTRKAFGVGRAMPLVAK 544 >gi|254445246|ref|ZP_05058722.1| NAD synthase family [Verrucomicrobiae bacterium DG1235] gi|198259554|gb|EDY83862.1| NAD synthase family [Verrucomicrobiae bacterium DG1235] Length = 546 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 218/571 (38%), Positives = 304/571 (53%), Gaps = 47/571 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+N VGD+AGN A A + QG +L++F EL + GYPP DL+FK+ F+ Sbjct: 1 MKIGLAQINTTVGDLAGNQALILEAYQSLAAQGAELVVFPELAVCGYPPRDLLFKRRFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ + + G V+GF P + N+ G I + K LP Y Sbjct: 61 DQLESLQQIAAQV--GSIPAVIGFVDPNPSKSGRDFYNAAAFCQNGEIQQIGRKTLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICK---------HLKKQGAE 169 F E R F + P+VF ++G+ ICEDIW N++I + +LK+Q + Sbjct: 119 DVFDEDRYFEP--AKLPLVFEWDGKKVGVTICEDIWGNTDISRARYPHAPVEYLKQQNLD 176 Query: 170 FLFSLNASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 +L+ASP+ + K ++R +V+ + P IYVN +GG DELIFDG S + Q Sbjct: 177 LHLNLSASPWHWGGKGEQREGLVSSASKTCNCPTIYVNAIGGNDELIFDGRSMVSNSSGQ 236 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYN---ACVLSLRD 285 + + FS + + DSAS P + N A VL LRD Sbjct: 237 IIAGLAAFSADLAVVDL--------------DSASEAIAPSFRQNLMANIEDALVLGLRD 282 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 YV K+ F K +IGLSGGIDSA+ AA+A ALG ENV + LP +S S DA AK Sbjct: 283 YVHKSGFKKALIGLSGGIDSAVVAALAAKALGPENVTGVSLPSAISSDHSKSDAQDLAKF 342 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG + + I D+V+ +S + ENIQ+R RG +LMALSN +LLTT Sbjct: 343 LGIPFHTIAIADIVSAAEGTLSPLTAGYGRDVTEENIQARARGLLLMALSNKLGTLLLTT 402 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY TLYGDM GG + DL KT+VF+LA + N T IP + + Sbjct: 403 GNKSELAVGYCTLYGDMCGGLAVISDLPKTKVFELARYMNREKPT---------IPVNTI 453 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYG 524 EK PSAELRP Q D++SLPPY ILD I++ VE S + +Q Y+ V+ + + Sbjct: 454 EKPPSAELRPDQKDEDSLPPYDILDGILEGYVERGLSSKDLIEQGYDSAVVKDMIRKVDL 513 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +EYKR+QA G K+T +FG R PI ++ Sbjct: 514 NEYKRKQAAPGLKLTPLAFGVGRRIPIVQRY 544 >gi|195953782|ref|YP_002122072.1| NAD synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195933394|gb|ACG58094.1| NAD+ synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 561 Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 203/569 (35%), Positives = 307/569 (53%), Gaps = 37/569 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K L +++ Q+N VG N+ K +A + +I+F EL + GY P+D+++ F Sbjct: 4 KILNVSLCQINTTVGTFEKNLEKTCDFISKA--KNSHIIVFPELSLCGYMPQDIIYSSKF 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + + LK + + IVVGF R+++ V NS+ +L G ++ DK LPNY+ Sbjct: 62 LDLNKLYFEKLKEHSKSIDSVIVVGFVREEK-AVYNSLGVLFKGEVLGFYDKRFLPNYNV 120 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F SG + + DIR G ICEDIW + +GAE L ++NASPY Sbjct: 121 FDEKRYFKSGEKDLLLDINDIRCGFSICEDIWYPDGTERQDALKGAEVLININASPYALK 180 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K + + + S ++YVN VG DEL+F+G S + + K F E Sbjct: 181 KQTFKENFLKARASDNLCFLVYVNLVGANDELVFNGESLVIGPKGDTIAKAKAFEEDILH 240 Query: 243 TEWHYDQQLSQ------WNYMSDDSA--------------STMYIPLQEEEADYNACVLS 282 + ++ W + +T+++ L +EE A LS Sbjct: 241 VSLDIKEVFTKRRTDLRWQEVCKPINSNISINISKNQRYDNTIHLSLPKEEELIKAITLS 300 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++DY +K F K I+GLSGGIDSAL +AV ALGKE+V+ + +P + +S +DA A Sbjct: 301 IKDYFKKQGFSKAILGLSGGIDSALVLYLAVLALGKESVKAVYMPTVFNKEESYKDAKAL 360 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + L +V+PI ++ + Q I EN+Q+RIR NIL +SN ++ Sbjct: 361 CENLDVDLEVIPIENIRTAY----EQIFSYHNFDIADENLQARIRANILFYISNKENRIV 416 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L+TSNKSE +VGY T+YGDM+GGF+P+KDLYKT+V+++A + N E+IP Sbjct: 417 LSTSNKSESAVGYTTIYGDMAGGFSPIKDLYKTEVYEIAYFINKD---------KEIIPK 467 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLL 522 + + K PSAELRP+Q DQ++LPPY +LD I+ ++E E + E++ E V V +L Sbjct: 468 NTINKPPSAELRPNQKDQDTLPPYDVLDKILWLLIE-EYKDKEDITEFDREVVEKVYDML 526 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPI 551 +EYKR+QAP+G K+ ++FG YPI Sbjct: 527 LKAEYKRKQAPIGPKLHERAFGIGWRYPI 555 >gi|33865038|ref|NP_896597.1| putative glutamine dependent NAD(+) synthetase [Synechococcus sp. WH 8102] gi|33638722|emb|CAE07017.1| putative glutamine dependent NAD(+) synthetase [Synechococcus sp. WH 8102] Length = 568 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 208/571 (36%), Positives = 307/571 (53%), Gaps = 36/571 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQLNPVVGD+ GN + A A+ +G L+L EL + GYPP DL+ + + + Sbjct: 1 MRLALAQLNPVVGDLRGNAERILAAARSASAEGATLLLTPELSLWGYPPRDLLLQPARLA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG--FPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNY 120 S+ +D L + DG ++VG P D G+ N + ++D G V K LP+Y Sbjct: 61 LQSAVLDGL-VEQLDGLCSLLVGVALPCDDDRAPGLYNGIALVDQGGWRGVARKQLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVF---RDIRLGILICEDIWKNSNICKH----------LKKQG 167 F E+R F G + P + RLG+ ICED+W + + L + Sbjct: 120 DVFDERRYFRPG--DGPCLLTLEEGERLGLTICEDLWVEDALQRERLAGPDPIAALVEAK 177 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + L +L ASP+ +K R ++ ++ P++Y+NQVGG DEL+FDG+S Sbjct: 178 PDLLINLAASPFDPSKPALRRQLAGQAARRLNCPVVYLNQVGGNDELVFDGSSLVVAPDG 237 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ E + + QQ + A P +EE A VL +RDY Sbjct: 238 STLLELPACREAVQVWDSSGPQQAT---------APLSQTPCREELL-LRALVLGVRDYA 287 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 K F + ++GLSGGIDSAL A IA ALG EN+ +++P ++S S+ DA A A L Sbjct: 288 GKCGFQRALLGLSGGIDSALVAVIAAAALGPENISALLMPSPWSSSGSINDATALANRLN 347 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K LPI L+ F + ++ L ++P G+ AEN+QSRIRG +LMA++N +LLTT N Sbjct: 348 IKTHTLPIQGLMQGFDTSLTPALGQQPQGVTAENLQSRIRGTLLMAVANQQGQLLLTTGN 407 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVIPP 462 KSE++VGY TLYGDM+GG + DLYKT VF L W +S + GL E++ Sbjct: 408 KSELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWIDSPEARNCREDLGLPQQGELVGE 467 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHL 521 +I K PSAELRP Q D +SLP Y LD ++K +++ + +D V V+ L Sbjct: 468 AIRRKPPSAELRPDQKDSDSLPDYSELDPLLKGLIQERTTPQALVAAGHDIPLVERVQRL 527 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L +E+KRRQA K++ ++FG PI+ Sbjct: 528 LQRAEFKRRQAAPLLKVSPQAFGSGWRLPIA 558 >gi|323699831|ref|ZP_08111743.1| NAD+ synthetase [Desulfovibrio sp. ND132] gi|323459763|gb|EGB15628.1| NAD+ synthetase [Desulfovibrio desulfuricans ND132] Length = 552 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 209/570 (36%), Positives = 304/570 (53%), Gaps = 41/570 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + QLNP+VGD+ GN AK A A+ G DL + +E+ ++GYPP DL+ SF+ Sbjct: 1 MKIGLLQLNPIVGDLDGNAAKILDAARRASALGADLCVTSEMALTGYPPRDLLLYGSFVD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 + L + DG +++G ++ G V N + G I+ K LP Y Sbjct: 61 RARQRAEDLARELADGPP-LLLGAVERNLSGQGKPVFNCALFCKGGEIVRSVRKTLLPTY 119 Query: 121 SEFHEKRTFISGYSNDP----IVFRDIRLGILICEDIWKNSNI------CKHLKKQGAEF 170 F E R F DP + + + +CED W + + + ++ A F Sbjct: 120 DVFDEARYFEPAPPGDPEANILRLDGATVAVTVCEDAWNDKDYWDARTYARDPLEEAAAF 179 Query: 171 ----LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + +L+ASP + K R +++ P++Y NQ GG D+L+FDG S F Sbjct: 180 RPDVIVNLSASPLFLGKQVLREDMLGAVARKYGTPMVYANQTGGNDDLVFDGRSCAFAPD 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 L + + F E + D N +++D E + A V RDY Sbjct: 240 GALMARARGFEEDVLLV----DTDAPSANTIAEDD-------FCREAETWRALVTGTRDY 288 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K+ F ++GLSGGIDSA+ AA+A +ALG +NV +++P Y+S S++D+ A+ L Sbjct: 289 VRKSGFATALVGLSGGIDSAVTAAVAAEALGADNVTCVLMPSPYSSRGSIDDSLELAENL 348 Query: 347 GCKYDVLPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 G K LPI ++ F +L F P ENIQSRIRGN+LMALSN A+LLTT Sbjct: 349 GVKTLTLPIEPIMAEFERTLAGPFAGYGPD-TTEENIQSRIRGNLLMALSNKYGALLLTT 407 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY T+YGDMSGGF + D+ KT VF LA W N+H +GP IP +I+ Sbjct: 408 GNKSELAVGYCTIYGDMSGGFAVISDVDKTGVFALAKWYNAH-----VGP---NIPGAII 459 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYG 524 K PSAELRP Q DQ+SLP Y +LD I+ VE++ S + Y++ V V +L+ Sbjct: 460 TKPPSAELRPDQKDQDSLPEYAVLDAILALHVEHQRSRREIIEAGYDEAVVNKVLNLVRA 519 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +E+KRRQA G K+T +SFG P++ + Sbjct: 520 AEFKRRQAAPGIKLTPRSFGTGWRMPLACR 549 >gi|121606606|ref|YP_983935.1| NAD+ synthetase [Polaromonas naphthalenivorans CJ2] gi|120595575|gb|ABM39014.1| NH(3)-dependent NAD(+) synthetase [Polaromonas naphthalenivorans CJ2] Length = 566 Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 205/575 (35%), Positives = 318/575 (55%), Gaps = 35/575 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKI +AQLN +GD+AGN+ K A A D+++F+E+ ++ Y P DL+ + F+ Sbjct: 2 LKITVAQLNFTIGDLAGNVVKMVAAARAAWADQSDIVVFSEMALTAYYPGDLLDEDGFMA 61 Query: 65 ACSSAI-DTLKSDTHDGGAGIVVGFP-RQDQEG--VLNSVVILDAGNIIAVRDKINLPNY 120 A D L + G VVG P R+ G ++N++ ++ G ++ K LP Y Sbjct: 62 RVDVAFADILLASRQTPGLHWVVGLPARRAAPGKKLINALRVIQGGEVLLEYAKQLLPTY 121 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G ++ R ++ G LICED W + N + L+ + + S Sbjct: 122 NIFDERRHFEPGQDVAKVLRIRGVQAGFLICEDGWNDHGQDYAVNPFERLRGAAPDLVIS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + ++RH++ + LPI+YVNQVGG D+L++DGASF + Q + ++ Sbjct: 182 INASPSNTGQREQRHQVFSAASRRNQLPIVYVNQVGGHDQLVYDGASFAVEPQAGVVYEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYN-ACVLSLRDYVQKNNF 292 F E+ ++ +D ++ ++ D + + + A Y VL LRDY ++ F Sbjct: 242 GRFVEE--VSTLRFDN--GRFLTLAGDRPAKVPVEGLPLMAFYRRQIVLGLRDYARRCGF 297 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + +IG SGGIDSAL A+A +ALG NV I +P +++S S++D+A + LG + Sbjct: 298 SRAVIGSSGGIDSALTLALAAEALGPANVVAITMPSQFSSAGSVDDSAILCRNLGVELLR 357 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 PI+ LV F + GI EN+Q+R RG +LM SN +LLTT NKSE+S Sbjct: 358 HPINGLVAEFSGGFKAAFGQPLQGIALENLQARSRGTVLMEYSNSFGHLLLTTGNKSELS 417 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGD +GG + DLYKT+VF L+ N T+G E+IP +I++K+PSAE Sbjct: 418 VGYCTLYGDTNGGLGLIGDLYKTEVFALSRHLNE---TAG----KEIIPQAIIDKAPSAE 470 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVEN----------EESFIN--NDQEYNDETVRYVEH 520 L P Q D +SLPPYP+LD+++K ++E F++ + N + + Sbjct: 471 LAPGQKDVDSLPPYPVLDEVLKLLIEGPLLAPGEYEKAACFVDALRKEAENRAMIERIRG 530 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ +EYKRRQAP ++ A++FG R PI+ KF Sbjct: 531 MIARNEYKRRQAPPIIRLRARAFGTGRQMPIAAKF 565 >gi|239820928|ref|YP_002948113.1| NAD+ synthetase [Variovorax paradoxus S110] gi|239805781|gb|ACS22847.1| NAD+ synthetase [Variovorax paradoxus S110] Length = 566 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 198/574 (34%), Positives = 304/574 (52%), Gaps = 33/574 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I +AQLNP +GD+AGN A+ A A DL++F+EL ++ Y P DL+ + F+ Sbjct: 2 LRITVAQLNPTIGDLAGNTARMIEAARRAAADESDLVVFSELSLTAYYPADLLEEDGFMD 61 Query: 65 ACSSAIDTLKSDTHDGGA-GIVVGFP-RQDQEG--VLNSVVILDAGNIIAVRDKINLPNY 120 A L S + + A VG P R++ G + N + ++ AG + K LP Y Sbjct: 62 RVEEAFGQLLSASREMPALHWAVGLPARREGAGKKLRNVLRVISAGEVRLEYAKQLLPTY 121 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G ++ R R+G LICED W + N ++ + + S Sbjct: 122 NVFDERRHFEPGPDVARVLRIRGTRVGFLICEDGWNDEGQDYLVNPFDRMRDAAPDLVVS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP K ++RH I LPI+YVNQVGG D+L++DGASF + Q + ++ Sbjct: 182 INASPSNIGKREQRHRIFGAASRRNGLPILYVNQVGGHDQLVYDGASFAVEPQAGVVYEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F+E + + L+ + L E VL LRDY ++ F Sbjct: 242 HRFAEDVSTLRFEDGRFLTP---AGEAPPPVPPQGLPTLEFYRQQIVLGLRDYARRCGFR 298 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + ++G SGGIDSAL A+AV+ALG +NV I +P +++S S++D+ + LG + Sbjct: 299 QAVVGSSGGIDSALTLALAVEALGAQNVVAITMPSRFSSAGSVDDSERLCRNLGVPLEAH 358 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I +V+ F + + EN+Q+R+RG +LM SN +LLTT NKSEISV Sbjct: 359 AIAGVVSQFEQGFETAFGQGLEDVALENLQARVRGTVLMGYSNSFGHLLLTTGNKSEISV 418 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGD +GG + DLYKT+VF L+ N+ E+IP +IL+K PSAEL Sbjct: 419 GYCTLYGDTNGGLGLIGDLYKTEVFALSRHLNAQAG-------RELIPQAILDKEPSAEL 471 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENE----------ESFINNDQEY--NDETVRYVEHL 521 P Q D +SLP Y +LD+++K ++E + SF++ + + V + + Sbjct: 472 APGQKDADSLPSYEVLDEVLKLLIEGQRLGAQEYEQARSFVDRLRATPEGEALVERIRGM 531 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +EYKRRQ+P ++ ++FG R PI+ ++ Sbjct: 532 VARNEYKRRQSPPIVRVRPRAFGSGRQMPIAARW 565 >gi|37522156|ref|NP_925533.1| NH(3)-dependent NAD(+) synthetase [Gloeobacter violaceus PCC 7421] gi|35213156|dbj|BAC90528.1| NH(3)-dependent NAD(+) synthetase [Gloeobacter violaceus PCC 7421] Length = 540 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 195/563 (34%), Positives = 297/563 (52%), Gaps = 38/563 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ QLN VGD+ GN + RA EA G DL + EL + GYPP DL+ ++F+ Sbjct: 1 MRVALLQLNSTVGDLVGNAGRIERAAREAAAAGADLAITHELALPGYPPRDLLLDRAFVA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 L + G ++VG P + N+ ++L+ G K LP Y Sbjct: 61 DVQQTAQRL-AHALAGVVPVLVGTAVPSAVGRPLANAALLLEGGECRETVLKGLLPTYDI 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI----------CKHLKKQGAEFLF 172 F E R F +G PI + +G+ +CEDIW + + L QGA +L Sbjct: 120 FDEDRYFEAGQRAYPIEIAGVAMGVHVCEDIWNDREFWPRPRYRRDPVEELAGQGARYLL 179 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +L++SP+Y K + R ++ LP++YVNQVGG DEL+FDG S FDG+ +L + Sbjct: 180 NLSSSPFYAGKQQLRERLLAHAARRHRLPVLYVNQVGGNDELLFDGRSCVFDGEGRLTAR 239 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNN 291 + F+E + + DS + P EA+ + A V+ DY +K Sbjct: 240 ARAFAEDMLLVDL--------------DSLAGRIEPQPTGEAEIWEALVMGTADYARKCG 285 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F + ++ LSGGIDSAL AI ALG NV +M+P Y+S S++D+ A A LG + Sbjct: 286 FQQGLVALSGGIDSALTLAIVAAALGPVNVLAVMMPSPYSSAGSIDDSLALAANLGVETL 345 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 LPI + F +++ + + + EN+Q+RIRG ++MALSN ++ T NKSE Sbjct: 346 KLPIAPAMAAFDQILAPAFADLAADVTEENLQARIRGTLMMALSNKWNRLVFITGNKSET 405 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VG+ TLYG +G + DLYK +V++LA W N G VIP IL K+PSA Sbjct: 406 AVGFNTLYGCTAGALAVIADLYKGEVYRLAHWLNRDG---------AVIPEGILTKAPSA 456 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRR 530 ELRP Q D + LPPY +LD I++ +E + E Y+ E ++ V ++ +E+KR+ Sbjct: 457 ELRPDQRDSDILPPYDVLDGILRAHLEGGRTPEEIAGEGYHPEVIKKVLAMVRRAEFKRK 516 Query: 531 QAPVGTKITAKSFGRDRLYPISN 553 Q P G +++ ++FG PI++ Sbjct: 517 QLPPGLRVSPRAFGIGWRMPIAH 539 >gi|220915428|ref|YP_002490732.1| NAD+ synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953282|gb|ACL63666.1| NAD+ synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 569 Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 210/579 (36%), Positives = 306/579 (52%), Gaps = 34/579 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +IA+AQ+N VGD AGN A+ R A E A G L +F EL + GYPP DL+ Sbjct: 1 MARSGRIALAQVNTTVGDFAGNAARVRAAAEVAREAGAALAVFPELTVCGYPPRDLLDLP 60 Query: 61 SFIQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKI 115 F++ A++ L + G +VVGFP GV N+ ++ G ++AV K Sbjct: 61 DFLERARQALEELARPAAWSKGIALVVGFPEAPDGAPPPGVYNAAALISDGRVVAVGRKS 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKH---------- 162 LP Y F E R F+ ++ + + LG+ +CEDIW + + Sbjct: 121 LLPTYDVFDETRYFLPAGASTTAAAPEGLGVPLGLSVCEDIWNDQRFWERPRYARDPIAD 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L + GA + +++ASPY K R +++ PI YVNQVGG D L+FDG S Sbjct: 181 LVRAGAGLVVNVSASPYAMGKAPLRERMLSASARDHGAPIAYVNQVGGNDALLFDGGSML 240 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACV 280 + + F E + + L+ + P + +AD A V Sbjct: 241 LARDGAVLARAPLFEEAVLVCDLEGGAPLALG--LDGRPLPPPPPPPADAQADEVLRALV 298 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 + +RDYV+K F + ++GLSGGIDSAL A IA +ALG ENV + +P +Y+S S EDAA Sbjct: 299 MGVRDYVRKCGFRQAVVGLSGGIDSALTACIAAEALGAENVLGVAMPSRYSSGHSREDAA 358 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--SGIVAENIQSRIRGNILMALSNHS 398 A+ LG ++ + I + H L + P + +N+Q+R+RG ILMA+SN + Sbjct: 359 ELARNLGVRFREIGIEPM--HAAFLAALAADGAPPLCDLADQNVQARVRGQILMAISNDT 416 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 A++LTT NKSEI+VGY TLYGDM+GG + D+ KT V+++A N+ + Sbjct: 417 GALVLTTGNKSEIAVGYCTLYGDMAGGLAAIGDVPKTLVYRVARAANARAGRT------- 469 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET-VRY 517 ++P K PSAEL+P Q DQ+SLPPY +LDDI++ VE +DE VR Sbjct: 470 LVPERTFTKPPSAELKPGQLDQDSLPPYDVLDDILQAYVEERRPLEAIVARGHDEAIVRR 529 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 V ++ SEYKRRQA K++ K+FG R +PI+ +R Sbjct: 530 VLRMVVQSEYKRRQAAPVLKVSEKAFGEGRRFPIAQGYR 568 >gi|86156713|ref|YP_463498.1| NH(3)-dependent NAD(+) synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773224|gb|ABC80061.1| NH(3)-dependent NAD(+) synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 569 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 207/577 (35%), Positives = 299/577 (51%), Gaps = 30/577 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +IA+AQ+N VGD AGN A+ R A E A G L +F EL + GYPP DL+ Sbjct: 1 MARSGRIALAQVNTTVGDFAGNAARVRAAAEVARDAGAALAVFPELTVCGYPPRDLLDLP 60 Query: 61 SFIQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKI 115 F++ A++ L + G +VVGFP V N+ ++ G + AV K Sbjct: 61 DFLERARQALEELARPAAWSKGIALVVGFPEAPAGAPPPGVYNAAALISEGRVAAVGRKS 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKH---------- 162 LP Y F E R F+ ++ + + LG+ +CEDIW + Sbjct: 121 LLPTYDVFDETRYFLPAGASTTAAAPEGLGVPLGLSVCEDIWNDQRFWDRPRYARDPIAD 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L + GA + +++ASPY K R +++ PI YVNQVGG D L+FDG S Sbjct: 181 LVRAGAGLVVNVSASPYAMGKAPLRERMLSASARDHGAPIAYVNQVGGNDALLFDGGSML 240 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 + + F E + + L+ + + A V+ Sbjct: 241 LARDGAVLARAPLFEEVVLVCDLDGGAPLALGLDGRPLPPPPAPPADPQADEVLRALVMG 300 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RDYV+K F + ++GLSGGIDSAL A +A +ALG ENV + +P +Y+S S EDAA Sbjct: 301 VRDYVRKCGFRQAVVGLSGGIDSALTACVAAEALGAENVLGVAMPSRYSSGHSREDAAEL 360 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--SGIVAENIQSRIRGNILMALSNHSKA 400 A+ LG + + I + H L + P + +N+Q+RIRG ILMA+SN + A Sbjct: 361 ARNLGVGFREIGIEPM--HAAFLAALAADGAPPLCDLADQNVQARIRGQILMAISNDTGA 418 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++LTT NKSEI+VGY TLYGDM+GG + D+ KT V+++A N+ + ++ Sbjct: 419 LVLTTGNKSEIAVGYCTLYGDMAGGLAAIGDVPKTLVYRVARAANARAGRT-------LV 471 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVE 519 P K PSAEL+P Q DQ+SLPPY +LDDI++ VE +DE TVR V Sbjct: 472 PERTFTKPPSAELKPGQLDQDSLPPYDVLDDILQAYVEERRPLEAIVARGHDEATVRRVL 531 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ SEYKRRQA K++ K+FG R +PI+ +R Sbjct: 532 RMVVQSEYKRRQAAPVLKVSEKAFGEGRRFPIAQGYR 568 >gi|120609669|ref|YP_969347.1| NH(3)-dependent NAD(+) synthetase [Acidovorax citrulli AAC00-1] gi|120588133|gb|ABM31573.1| NH(3)-dependent NAD(+) synthetase [Acidovorax citrulli AAC00-1] Length = 566 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 220/582 (37%), Positives = 320/582 (54%), Gaps = 49/582 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I +AQLN VGDI GN+ + A +A + G DL++FTEL + GY P D++ + F++ Sbjct: 2 LRITLAQLNLTVGDIEGNVQRMTDAARQAAQAGADLVVFTELALCGYYPGDMLEESGFME 61 Query: 65 ACSSAIDTLKSDTHDGGAGI--VVGFPRQDQ---EGVLNSVVILDAGNIIAVRDKINLPN 119 + I L+ D G+ VVG P + Q + + NS+++L G I K LP Sbjct: 62 RVDAGIAALQ-DASRATPGLHWVVGTPTRAQGPGKRLHNSLLVLRDGAIRLTYAKQLLPT 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLG-----ILICEDIWKN------SNICKHLKKQGA 168 Y+ F E+R F G P V R +R+G L+CED W + +N + L Sbjct: 121 YNIFDERRHFEPG----PDVARVLRIGHAQIGFLVCEDGWNDAVADYATNPFQRLADAAP 176 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + + S+NASP + K + RH++ LP++YVNQVGGQD++++DGASF + + Sbjct: 177 DLVVSINASPSHIGKREVRHQVFGDAARRHGLPVVYVNQVGGQDQIVYDGASFAAEPEAG 236 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP---LQEEEADYNACVLSLRD 285 + F+ F+E + T L + S D +P L + VL LRD Sbjct: 237 VVFEAPRFAE-DVRTLC-----LEGGRFRSADGGPLPPVPREGLPTMDFYRQQIVLGLRD 290 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y ++ F +V++G SGGIDSAL A+A +A+G ENV + +P +++S S++D+ A + Sbjct: 291 YARRCGFGQVVVGSSGGIDSALTLALAAEAMGAENVIAVTMPSRFSSSGSVDDSVALCRN 350 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG + PI DLV + + + G+ EN+Q+RIRG ILM SN +LLTT Sbjct: 351 LGIRLHTHPIADLVAGYAAQFEASFGQSLEGLPLENLQARIRGTILMEYSNAFGHLLLTT 410 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSEISVGY TLYGD +GG L DLYKT+VF+L+ N+H E+IP +I+ Sbjct: 411 GNKSEISVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHVNAHAG-------RELIPQAII 463 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE----------ESFINNDQ--EYNDE 513 EK PSAEL P Q D +SLPPYP+LD ++K ++E E F Q E Sbjct: 464 EKEPSAELAPGQRDVDSLPPYPVLDQVLKLLIEGEGLSHAEYADARDFAARLQHDEAGRA 523 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V V ++ +EYKRRQAP ++ AK+FG R PI+ K+ Sbjct: 524 LVHRVRRMIARNEYKRRQAPPILRVRAKAFGNGRQMPIAAKY 565 >gi|326315766|ref|YP_004233438.1| NAD+ synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372602|gb|ADX44871.1| NAD+ synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 566 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 218/582 (37%), Positives = 321/582 (55%), Gaps = 49/582 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I +AQLN VGDI GN+ + A +A + G DL++FTEL + GY P D++ + F++ Sbjct: 2 LRITLAQLNLTVGDIEGNVQRMTDAARQAAQAGADLVVFTELALCGYYPGDMLEESGFME 61 Query: 65 ACSSAIDTLKSDTHDGGAGI--VVGFPRQDQ---EGVLNSVVILDAGNIIAVRDKINLPN 119 + + L+ D G+ VVG P + Q + + NS+++L G I K LP Sbjct: 62 RVDAGMAALQ-DASRATPGLHWVVGTPTRAQGPGKRLHNSLLVLQDGAIRLTYAKQLLPT 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLG-----ILICEDIWKN------SNICKHLKKQGA 168 Y+ F E+R F G P V R +R+G L+CED W + +N + L Sbjct: 121 YNIFDERRHFEPG----PDVARILRIGQAQIGFLVCEDGWNDAVADYATNPFQRLADAAP 176 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + + S+NASP + K + RH++ LP++YVNQVGGQD++++DGASF + + Sbjct: 177 DLVVSINASPSHIGKREVRHQVFGDAARRHGLPVVYVNQVGGQDQIVYDGASFAAEPEAG 236 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP---LQEEEADYNACVLSLRD 285 + F+ F+E + T L + S D + +P L + VL LRD Sbjct: 237 VVFEAPRFAE-DVRTLC-----LEDGRFRSGDGGALPPVPREGLPTMDFYRQQIVLGLRD 290 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y ++ F +V++G SGGIDSAL A+A +A+G ENV + +P +++S S++D+ A + Sbjct: 291 YARRCGFGQVVVGSSGGIDSALTLALAAEAMGAENVVAVTMPSRFSSSGSVDDSVALCRN 350 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG + PI DLV + + + G+ EN+Q+RIRG ILM SN +LLTT Sbjct: 351 LGVRLHTHPIADLVAGYAAQFEASFGQPLEGLPLENLQARIRGTILMEYSNAFGHLLLTT 410 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSEISVGY TLYGD +GG L DLYKT+VF+L+ N+H E+IP +I+ Sbjct: 411 GNKSEISVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHVNAHAG-------RELIPQAII 463 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE----------ESFINNDQ--EYNDE 513 +K PSAEL P Q D +SLPPYP+LD ++K ++E E F Q E Sbjct: 464 DKEPSAELAPGQRDVDSLPPYPVLDQVLKLLIEGEGLSHAEYADARDFAARLQHDEAGRA 523 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V V ++ +EYKRRQAP ++ AK+FG R PI+ K+ Sbjct: 524 LVNRVRRMIARNEYKRRQAPPILRVRAKAFGNGRQMPIAAKY 565 >gi|57239002|ref|YP_180138.1| putative glutamine-dependent NAD(+) synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58578940|ref|YP_197152.1| putative glutamine-dependent NAD(+) synthetase [Ehrlichia ruminantium str. Welgevonden] gi|57161081|emb|CAH57988.1| putative glutamine-dependent NAD+ synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58417566|emb|CAI26770.1| Probable glutamine-dependent NAD(+) synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 513 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 198/544 (36%), Positives = 286/544 (52%), Gaps = 42/544 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL I I+QLN + D N K ++ ++ D+ +F+ ISGY K Sbjct: 1 MNKLSIFISQLNYIPEDPNYNYNKILKSYNKSTSLSADIAIFSRYAISGYIQNIPTLSKD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F CS+ I+ L T I++G ++ + ++ ++ G I Sbjct: 61 FFNQCSNIIEKLAIHTKKHNTAILIGSIKEFNNIIHETIYLIKNGIIT------------ 108 Query: 122 EFHEKRTFISG--YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 E TFI+ ++ P F I I I + + H + L ++ +PY Sbjct: 109 ---ELVTFITNTLHAIIPTTF-SINKTIFTLYPISEELELPIHSENT---ILLIMDNTPY 161 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF-CFDGQQQLAFQMKHFSE 238 N RHE + + H ++Y+NQ+GG + ++F G SF F+ Q Sbjct: 162 TQNT-NIRHEAIVKLTHNKH--VVYINQIGGYNSVVFHGKSFFTFNNQY----------- 207 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 NF+ W D ++ + + + + + +DY A +L+L+DYVQKN+ KVI+G Sbjct: 208 -NFLNTWEEDSKIFKADSRKSNYNNAVVYSDNNIRSDYQALMLALKDYVQKNSMTKVILG 266 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A IA D LG NV + MLP KYTS S+ DA CA LG Y+ L I + Sbjct: 267 LSGGIDSALVATIAADGLGPANVLSFMLPTKYTSETSMIDAQECATRLGISYNTLSIETI 326 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 ++++ I EN+QSRIRG ILMALSN K MLL+T NKSE VGY TL Sbjct: 327 FQTSLTILNNIFAGTQEDITEENLQSRIRGLILMALSNKFKLMLLSTGNKSESLVGYATL 386 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GGF P+KD+YKT+V++L+ WRN + + L T++IP I+ K PSAELR +Q Sbjct: 387 YGDMCGGFAPIKDIYKTRVYELSQWRNKNIPINSLCKNTDIIPYRIITKHPSAELRYNQI 446 Query: 479 DQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 DQ++LP Y ILD I+ +V+ E IN + ++ + V YV HL+ SE+KR+QAP G Sbjct: 447 DQDTLPAYAILDSILTLLVDQRLSIEEVIN--KGHSSKNVNYVAHLIKKSEFKRKQAPTG 504 Query: 536 TKIT 539 IT Sbjct: 505 LIIT 508 >gi|197120716|ref|YP_002132667.1| NAD+ synthetase [Anaeromyxobacter sp. K] gi|196170565|gb|ACG71538.1| NAD+ synthetase [Anaeromyxobacter sp. K] Length = 569 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 207/577 (35%), Positives = 302/577 (52%), Gaps = 30/577 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +IA+AQ+N VGD AGN A+ R A E A G L +F EL + GYPP DL+ Sbjct: 1 MARSGRIALAQVNTTVGDFAGNAARVRAAAEVAREAGAALAVFPELTVCGYPPRDLLDLP 60 Query: 61 SFIQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKI 115 F++ A++ L + G +VVGFP V N+ ++ G ++AV K Sbjct: 61 DFLERARQALEELARPAAWSKGIALVVGFPEAPAGAPPPGVYNAAALISDGRVVAVGRKS 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKH---------- 162 LP Y F E R F+ ++ + + LG+ +CEDIW + + Sbjct: 121 LLPTYDVFDETRYFLPAGASTTAAAPEGLGVPLGLSVCEDIWNDQRFWERPRYARDPIAD 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L + GA + +++ASPY K R +++ PI YVNQVGG D L+FDG S Sbjct: 181 LVRAGAGLVVNVSASPYAMGKAPLRERMLSASARDHGAPIAYVNQVGGNDALLFDGGSML 240 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 + + F E + + L+ + + A V+ Sbjct: 241 LARDGAVLARAPLFQEAVLVCDLEGGAPLALGLDGRPLPPPAPPPADPQADEVLRALVMG 300 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RDYV+K F + ++GLSGGIDSAL A IA +ALG ENV + +P +Y+S S EDAA Sbjct: 301 VRDYVRKCGFRQAVVGLSGGIDSALTACIAAEALGAENVLGVAMPSRYSSGHSREDAAEL 360 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--SGIVAENIQSRIRGNILMALSNHSKA 400 A+ LG ++ + I + H L + P + +N+Q+R+RG ILMA+SN + A Sbjct: 361 ARNLGVRFREIGIEPM--HAAFLAALAADGAPPLCDLADQNVQARVRGQILMAISNDTGA 418 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++LTT NKSEI+VGY TLYGDM+GG + D+ KT V+++A N+ + ++ Sbjct: 419 LVLTTGNKSEIAVGYCTLYGDMAGGLAAIGDVPKTLVYRVARAANARAGRT-------LV 471 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE-TVRYVE 519 P K PSAEL+P Q DQ+SLPPY +LDDI++ VE +DE TVR V Sbjct: 472 PERTFTKPPSAELKPGQLDQDSLPPYDVLDDILQAYVEERRPLEAIVARGHDEATVRRVL 531 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ SEYKRRQA K++ K+FG R +PI+ +R Sbjct: 532 RMVVQSEYKRRQAAPVLKVSEKAFGEGRRFPIAQGYR 568 >gi|58616998|ref|YP_196197.1| putative glutamine-dependent NAD(+) synthetase [Ehrlichia ruminantium str. Gardel] gi|58416610|emb|CAI27723.1| Probable glutamine-dependent NAD(+) synthetase [Ehrlichia ruminantium str. Gardel] Length = 513 Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 198/544 (36%), Positives = 287/544 (52%), Gaps = 42/544 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL I I+QLN + D N K ++ ++ D+ +F+ ISGY K Sbjct: 1 MNKLSIFISQLNYIPEDPNYNYNKILKSYNKSTSLSADIAIFSRYAISGYIQNIPTLSKD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F CS+ I+ L T I++G ++ + ++ ++ G I Sbjct: 61 FFNQCSNIIEKLAIHTKKHNTAILIGSIKELNNIIHETIYLIKNGIIT------------ 108 Query: 122 EFHEKRTFISGY--SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 E TFI+ + P F I I I + + H + L ++ +PY Sbjct: 109 ---ELVTFITNTLPAIIPTTF-SINKTIFTLYPISEELELPIHSENT---ILLIMDNTPY 161 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF-CFDGQQQLAFQMKHFSE 238 N RHE + + H ++Y+NQ+GG + ++F G SF F+ Q Sbjct: 162 TQNT-NIRHEAIVKLTHNKH--VVYINQMGGYNSVVFHGKSFFTFNNQY----------- 207 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 NF+ W D ++ + + + + + +DY A +L+L+DYVQKN+ KVI+G Sbjct: 208 -NFLNTWEEDSKIFKADSRKSNYNNAVVHSDNNIRSDYQALMLALKDYVQKNSMTKVILG 266 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A IA D LG NV + MLP KYTS S+ DA CA LG Y++L I + Sbjct: 267 LSGGIDSALVATIAADGLGPANVLSFMLPTKYTSETSMIDAQECAARLGISYNILSIETI 326 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 ++++ I EN+QSRIRG ILMALSN K MLL+T NKSE VGY TL Sbjct: 327 FQTSLTILNNIFAGTQEDITEENLQSRIRGLILMALSNKFKLMLLSTGNKSESLVGYATL 386 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GGF P+KD+YKT+V++L+ WRN + + L T++IP I+ K PSAELR +Q Sbjct: 387 YGDMCGGFAPIKDIYKTRVYELSQWRNKNIPINSLCKNTDIIPYRIITKHPSAELRYNQI 446 Query: 479 DQESLPPYPILDDIIKRIVENE---ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 DQ++LP Y ILD I+ +V+ E IN + ++ + V YV HL+ SE+KR+QAP+G Sbjct: 447 DQDTLPAYAILDSILTLLVDQRLSIEEVIN--KGHSSKNVNYVAHLIKKSEFKRKQAPIG 504 Query: 536 TKIT 539 IT Sbjct: 505 LIIT 508 >gi|238060379|ref|ZP_04605088.1| NAD+ synthetase [Micromonospora sp. ATCC 39149] gi|237882190|gb|EEP71018.1| NAD+ synthetase [Micromonospora sp. ATCC 39149] Length = 536 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 200/547 (36%), Positives = 288/547 (52%), Gaps = 59/547 (10%) Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAG---IVVGF-----PRQ---DQE---GVLNSVVI 102 +F++SF+ A +A+ L +D G G +VVG+ P Q D E G N+ + Sbjct: 1 MFRRSFVAASQAALRRLAADLAADGLGGLPVVVGYLDADGPPQVSSDAEPGRGARNAAAV 60 Query: 103 LDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH 162 L G ++A K +LPNY F E R F+ G + + + + + ICED+W+ Sbjct: 61 LHGGEVVATYFKHHLPNYGVFDEDRYFVPGDTLTVVRVGGVDVALTICEDMWQAGGPFAA 120 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 ++ G + ++N SPY NK R +V + + + YVN VGGQDEL+F+G S Sbjct: 121 ARQAGVGLVVTINGSPYELNKDDIRLPLVRRRAAEAGATVAYVNMVGGQDELVFEGDSLI 180 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHY----DQQLSQWNYMSDDSASTMYI----------- 267 L + F E M + ++ + A M I Sbjct: 181 VGADGTLLARAPQFVEHLLMHDVELPAAAERAGGDGARAGGEVADGMRIVRATVGDVPPA 240 Query: 268 ------------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA 315 P+ +E + A VL LRDYV KN F V++GLSGGIDSA+ AA+AVDA Sbjct: 241 PGGAAAVGGIIEPVADEAEVWQALVLGLRDYVDKNRFPSVVLGLSGGIDSAVVAALAVDA 300 Query: 316 LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS 375 LG V + LP +++S S DA AK G Y V PI +V+ F + MS S Sbjct: 301 LGPGRVVGVSLPSQHSSEHSRADAEDLAKRTGLDYRVAPIQPMVDTFLANMSL------S 354 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 G+ EN+Q+R+RG +LMALSN ++LTT NKSE++VGY TLYGD GGFNP+KD++KT Sbjct: 355 GVAVENLQARVRGVLLMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGFNPVKDVWKT 414 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKR 495 +++LA WRN+ G P IP + + K PSAEL P Q D ++LP Y +LD I+ Sbjct: 415 LIWRLAKWRNADAARRGETP---PIPENSIGKPPSAELSPGQLDSDTLPDYDVLDPILIG 471 Query: 496 IVENEESFI-----NNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 ++ + +D D +R V+ +EYKRRQ+ GTKI+ K+FGRDR P Sbjct: 472 YIDGDLGRTGLVESGHDPAIIDRVLRMVDT----AEYKRRQSAPGTKISMKAFGRDRRLP 527 Query: 551 ISNKFRD 557 I+N++R+ Sbjct: 528 ITNRWRE 534 >gi|83814287|ref|YP_444548.1| NAD(+) synthase (glutamine-hydrolysing) [Salinibacter ruber DSM 13855] gi|83755681|gb|ABC43794.1| NAD(+) synthase (glutamine-hydrolysing) [Salinibacter ruber DSM 13855] Length = 567 Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 205/573 (35%), Positives = 309/573 (53%), Gaps = 53/573 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NP +GD+ GN K A+ +G DL++F EL ++GYPPEDL+ F + Sbjct: 1 MQIALAQINPTIGDLEGNREKILDYARRADDRGADLVVFPELCVTGYPPEDLLENPFFKR 60 Query: 65 ACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKIN---LP 118 A +D L ++ D G I P D+ G + N+ ++L+ G AV+D++ LP Sbjct: 61 AVQRTVDHLARALPADLGVIIGAPVPNGDRFGKPLHNAALLLENG---AVQDRVYKTLLP 117 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK-------------NSNICKHLKK 165 Y F E R F + +R +R+G+ +CED+W + L Sbjct: 118 TYDIFDEDRHFEPAEERRLLEWRGLRIGLHVCEDMWNVHQPEGVDQSERYERDPVAELAA 177 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS--FCF 223 + +++ASP+ K + R ++V P + NQVG E+I DG S Sbjct: 178 LDPDLFVNISASPFSIGKHEVRDKLVEHICRRHERPFLLCNQVGANTEIIHDGDSRVHAA 237 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLS 282 DG Q +++ L W+ S A T ++ AD ++A VL Sbjct: 238 DGTQ-------------VACAASFEEDLLFWDTESSPEACTTG---RDAIADLHDALVLG 281 Query: 283 LRDYVQKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 +RDY +K F K ++GLSGGIDSA+ A+AV+ALG E V + +P + +S S+ D+ A Sbjct: 282 VRDYYEKTGIFDKALVGLSGGIDSAVTCALAVEALGPERVVGVTMPSEISSEGSVTDSQA 341 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMS-QFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A LG ++ +PI V+ F +++ +F EP G+ EN+QSR RG LMALSN Sbjct: 342 LADNLGIEFKEIPIKPAVDAFDDMLADEFAGTEP-GVAEENVQSRARGVTLMALSNKFGH 400 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE+++GY TLYGD +GG L D+ KT+V++LA N + +G VI Sbjct: 401 LLLSTGNKSEVAIGYVTLYGDTNGGVAVLSDVLKTRVYELARHIN---VRAG----ANVI 453 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYV 518 P + +EK PSAELR Q D ++LPPY LD I++R VE ++ I + +++ VR V Sbjct: 454 PQNTIEKPPSAELRAGQKDTDTLPPYETLDAILERYVEQKKELGTIVGETGLDEDLVRGV 513 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPI 551 + +EYKRRQAP G ++T K+FG R PI Sbjct: 514 LRQVDQNEYKRRQAPPGLRVTEKAFGIGRRIPI 546 >gi|73666890|ref|YP_302906.1| NAD+ synthase [Ehrlichia canis str. Jake] gi|72394031|gb|AAZ68308.1| DNA-directed RNA polymerase, subunit H [Ehrlichia canis str. Jake] Length = 505 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 194/532 (36%), Positives = 284/532 (53%), Gaps = 39/532 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I IAQLN +I N K + E+ ++ DL +F I GY + K F C Sbjct: 6 IFIAQLNYNPENIDYNYDKITKLYTESVKKAADLAIFARYSIPGYIQKIPYLSKDFFNQC 65 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 AI+ L T++ I++G +Q + + ++ G I A+ EF + Sbjct: 66 DHAINKLALQTYNKNTAIIIGSIKQQNNKIFEIIYLIKNGKIEAL---------IEFSTE 116 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 F S+ F ++ + + I K + + K L ++ +PY + Sbjct: 117 YQF----SDIAATFTINKINVSLLP-ISKIPTLPSYTKD---TLLLIMDNTPYTQ-ETNS 167 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF-CFDGQQQLAFQMKHFSEQNFMTEW 245 R +++ + +Y+NQVGG + +F G SF F+GQ NF+ W Sbjct: 168 RDNMISKLTCDKYA--VYINQVGGYNNRVFHGKSFFTFNGQY------------NFLNMW 213 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 D + Y D + T Y+ + E+DY A +L+LRDYV KN+ +IIGLSGGID Sbjct: 214 QEDSNI----YSIDFAKQTHYMTTCDNIESDYQALMLALRDYVYKNSMASIIIGLSGGID 269 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A+IA DALG +NV + MLP KYTS S+ D+ CAK L YD+LPI + + + Sbjct: 270 SALVASIAADALGPKNVHSFMLPTKYTSQTSITDSQECAKRLEISYDILPIEKIFQNSLA 329 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + EN+Q+RIRG ILMALSN K MLL+T NKSEI VGY TLYGDM G Sbjct: 330 VLQNTFANTEEDVTEENLQARIRGIILMALSNKFKFMLLSTGNKSEIFVGYATLYGDMCG 389 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF P+KD+YKT+V++L+ WRN + + L +VIP I+EK PSAEL +Q DQ++LP Sbjct: 390 GFAPIKDIYKTKVYELSKWRNKNIPKNSLCQKIDVIPSQIIEKHPSAELCYNQKDQDTLP 449 Query: 485 PYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVG 535 Y LD ++ +++ S + ++ YN + V Y+ HL+ S++KR QAP G Sbjct: 450 DYTTLDSVLTLLIDKNYSVEDVIKKGYNFQDVNYIVHLIKKSQFKREQAPTG 501 >gi|68171125|ref|ZP_00544534.1| NAD+ synthase [Ehrlichia chaffeensis str. Sapulpa] gi|88658554|ref|YP_507618.1| glutamine-dependent NAD(+) synthetase [Ehrlichia chaffeensis str. Arkansas] gi|67999450|gb|EAM86090.1| NAD+ synthase [Ehrlichia chaffeensis str. Sapulpa] gi|88600011|gb|ABD45480.1| glutamine-dependent NAD(+) synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 505 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 187/531 (35%), Positives = 288/531 (54%), Gaps = 37/531 (6%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I I+QLN +I N ++ +E+ Q D+ +F+ +SG+ + K+F C Sbjct: 6 IFISQLNYNPENIDYNYDSITKSYQESVYQAADIAIFSRYAVSGHIQKIPTLHKNFFNQC 65 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 ++ I+ L T++ I++G ++ + ++ ++ G I + I P S+ + Sbjct: 66 TNIINKLALQTNNKNTAIIIGSIKKKNNVIFETIYLIKNGEITEL---IEFPTDSQSSD- 121 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 IS +I + +L I K L + L + + Y Sbjct: 122 ---ISA----TFTINNINVLLLPISKIPK-------LPIHNNDTLLLIMDNTQYTKNTNS 167 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF-CFDGQQQLAFQMKHFSEQNFMTEW 245 R ++++ + + +Y+NQ+GG + L+F G SF F+GQ NF+ W Sbjct: 168 RDDLISKLTFNKYA--VYINQIGGYNNLVFHGKSFFTFNGQY------------NFLNMW 213 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 D ++ + + D+ + I E+DY A +L+LRDY+ KN VI+GLSGGIDS Sbjct: 214 QEDSKVCKADLAKQDNHT---ITSNSIESDYQALMLALRDYIYKNAMTSVIMGLSGGIDS 270 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 AL A+IA DALG NV ++MLP KYTS S+ D+ CA LG Y++L I ++ + Sbjct: 271 ALVASIAADALGPNNVHSLMLPTKYTSQMSITDSKECAMRLGISYNILSIEEIFQTSLAA 330 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + I EN+Q+RIRGNILMALSN K MLL+T NKSE+ VGY TLYGDM GG Sbjct: 331 LQNTFIDTQEDITEENLQARIRGNILMALSNKFKFMLLSTGNKSELFVGYATLYGDMCGG 390 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 F P+KD+YKT+V++L+ WRN + + L +VIP I+EK PSAELR +Q DQ++LP Sbjct: 391 FAPIKDIYKTRVYELSKWRNKNIPVNSLCKKIDVIPSQIIEKHPSAELRYNQKDQDTLPD 450 Query: 486 YPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVG 535 Y ILD I+ +++ S + ++ YN + V Y+ HL+ S++KR QA G Sbjct: 451 YAILDSILTLLIDQNHSTEDIIKKGYNIQDVNYIIHLIQKSQFKREQASTG 501 >gi|297180988|gb|ADI17190.1| NAD synthase [uncultured Rhodobacterales bacterium HF0070_10D05] Length = 343 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 161/344 (46%), Positives = 224/344 (65%), Gaps = 7/344 (2%) Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEA 274 +FDG +F + LA ++ F E + ++ WN + + A +P ++E Sbjct: 4 VFDGGTFALNRGGSLAIKLPLFEEA--LEHIVLEETDIGWNIIKGELAK---VPC-DKEL 57 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 DY+A V+ LRDY +K+ F KV++GLSGGIDSAL A IA DA+G NV++IMLP +TS Sbjct: 58 DYHAMVMGLRDYCKKSGFEKVVLGLSGGIDSALVAVIASDAIGSANVRSIMLPSPHTSQT 117 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 SL DA + LGCK D LPI+D + +S + + ENIQSR+RG +LMA+ Sbjct: 118 SLIDATDLVENLGCKSDTLPINDSLTAIDKTLSSTFEGRKIDLTEENIQSRLRGLLLMAV 177 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN MLLTT NKSE+SVGY T+YGDM+GGFNP+KDLYKT+VF+++ WRN + + G Sbjct: 178 SNKFGEMLLTTGNKSEVSVGYSTIYGDMAGGFNPIKDLYKTKVFEISKWRNKNHRSWMKG 237 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDE 513 P +IP +I+ K+P+AELRP+Q D +SLP YP+LD I+ +V+ + S + + YN Sbjct: 238 PPGSIIPDNIITKAPTAELRPNQKDSDSLPDYPVLDAILTILVDEDGSTSDCLKAGYNKS 297 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V VE LLYGSEYKR Q+ GT+++ ++F DR YPI NK+RD Sbjct: 298 DVSKVEKLLYGSEYKRFQSAPGTRLSQRAFWLDRRYPIVNKWRD 341 >gi|217966619|ref|YP_002352125.1| NAD+ synthetase [Dictyoglomus turgidum DSM 6724] gi|217335718|gb|ACK41511.1| NAD+ synthetase [Dictyoglomus turgidum DSM 6724] Length = 526 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 200/559 (35%), Positives = 305/559 (54%), Gaps = 44/559 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI IAQ+NP++GDI GN K + A +A D+++F+EL + GYPP DL+ Sbjct: 1 MKITIAQINPIIGDIEGNFIKIKDAILKALSDKSDIVVFSELSLLGYPPFDLLKNNIIKN 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + I++G P + + NS+ + II DK N Sbjct: 61 KIEEGVKRILQENFP--INILLGAPYFEDNRIYNSIYWIKENKIIKRIDKFYFSN-DPIG 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIW---KNSNICKHLKKQGAEFLFSLNASPYYH 181 + F G + D + + ++G+ I +D +SN +LK ++ + +++S YY Sbjct: 118 QGNYFSYG-TPDFLEIDNKKIGLFIGDDFIFSSDHSNYKDYLKT--SDLILIISSSFYYF 174 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K ++R E ++ + +IYVNQVGG ELIF+G S + +L F+ + F E Sbjct: 175 GKRQERIEKISQLAKGIEKEVIYVNQVGGNGELIFEGGSLAISKKGELLFEGEIFKE--- 231 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D + + S+ I Y+ VL +RD+++K+ F K +IGLSG Sbjct: 232 ------DIKTIDLKNLYPTSSKGEDISFL-----YDGLVLGVRDFIKKSGFQKAVIGLSG 280 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL A IA +ALG+ENV + LP YTS +S+EDA +K LG ++ ++PI D+ Sbjct: 281 GIDSALVACIAREALGEENVLGVSLPSIYTSRESIEDAEKLSKNLGIEFRIIPISDI--- 337 Query: 362 FFSLMSQFLQEEPSG-----IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 F+S + + PSG + EN+QSRIRGN+LM +SN + +LL T N+SE GY Sbjct: 338 FYSYLKEL---NPSGNPIMDVAEENLQSRIRGNLLMFISNREEYILLATGNRSEALTGYC 394 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGD +G + D+YKT V++LA++ N + E+IP +IL K+PSAELRP Sbjct: 395 TLYGDTAGALEVIGDIYKTTVYELANYVNKN---------NEIIPQNILAKAPSAELRPG 445 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D++SLPPY ILD I+K V+ +S Q Y E V+ V + SEYKRRQ P Sbjct: 446 QKDEDSLPPYSILDPILKAYVDENKSLEEIVQMGYKREIVKTVIEKVERSEYKRRQIPPV 505 Query: 536 TKITAKSFGRDRLYPISNK 554 +I +K+ ++R++P+ K Sbjct: 506 LRIRSKNPLKERIFPLVYK 524 >gi|294506296|ref|YP_003570354.1| glutamine-dependent NAD(+) synthetase [Salinibacter ruber M8] gi|294342624|emb|CBH23402.1| glutamine-dependent NAD(+) synthetase [Salinibacter ruber M8] Length = 567 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 205/574 (35%), Positives = 308/574 (53%), Gaps = 55/574 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NP +GD+ GN K A+ G DL +F EL ++GYPPEDL+ F + Sbjct: 1 MQIALAQINPTIGDLEGNREKILDYARRADDCGADLAVFPELCVTGYPPEDLLENPFFKR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEG--VLNSVVILDAGNIIAVRDKIN---L 117 A +D L + G+++G P D+ G + N+ ++L+ G AV+D++ L Sbjct: 61 AVQRTVDHL-AQALPSDLGVIIGAPVPNGDRFGKPLHNAALLLENG---AVQDRVYKTLL 116 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK-------------NSNICKHLK 164 P Y F E R F + +R +R+G+ +CED+W + L Sbjct: 117 PTYDIFDEDRHFEPAEERRLLEWRGLRIGLHVCEDMWNVHQPEGVDQSERYERDPVAELA 176 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS--FC 222 + +++ASP+ K + R ++V P + NQVG E+I DG S Sbjct: 177 ALDPDLFVNISASPFSIGKHEVRDKLVEHICRRHERPFLLCNQVGANTEIIHDGDSRVHA 236 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVL 281 DG Q +++ L W+ S A T ++ AD ++A VL Sbjct: 237 ADGTQ-------------VACAASFEEDLLFWDTESSPEACTTG---RDAIADLHDALVL 280 Query: 282 SLRDYVQKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 +RDY +K F K ++GLSGGIDSA+ A+AV+ALG E V + +P + +S S+ D+ Sbjct: 281 GVRDYYEKTGIFDKALVGLSGGIDSAVTCALAVEALGPERVVGVTMPSEISSEGSVTDSQ 340 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMS-QFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A A LG ++ +PI V+ F +++ +F EP G+ EN+QSR RG LMALSN Sbjct: 341 ALADNLGIEFKEIPIKPAVDAFDDMLADEFAGTEP-GVAEENVQSRARGVTLMALSNKFG 399 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +LL+T NKSE+++GY TLYGD +GG L D+ KT+V++LA N + +G V Sbjct: 400 HLLLSTGNKSEVAIGYVTLYGDTNGGVAVLSDVLKTRVYELARHIN---VRAG----ENV 452 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRY 517 IP + +EK PSAELR Q D ++LPPY LD I+KR VE ++ I + +++ VR Sbjct: 453 IPQNTIEKPPSAELRAGQKDTDTLPPYETLDAILKRYVEQKKELGTIVGETGLDEDLVRG 512 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPI 551 V + +EYKRRQAP G ++T K+FG R PI Sbjct: 513 VLRQVDQNEYKRRQAPPGLRVTEKAFGIGRRIPI 546 >gi|297620461|ref|YP_003708598.1| putative glutamine-dependent NAD(+) synthetase [Waddlia chondrophila WSU 86-1044] gi|297375762|gb|ADI37592.1| putative glutamine-dependent NAD(+) synthetase [Waddlia chondrophila WSU 86-1044] Length = 544 Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 192/567 (33%), Positives = 299/567 (52%), Gaps = 40/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ IAQ+NP VGD+ GN +A L+LF EL +SGYPP+D + F + Sbjct: 1 MRVLIAQINPTVGDLEGNCQLILDGIAKAKSLKAHLVLFPELALSGYPPDDFLLLSDFTE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 A ++ + + G ++VG P+ + +G + NS I+ +I ++DK LP Y Sbjct: 61 AIDRYLEKIVEASK--GIAVIVGTPKMNPQGRHLKLCNSAAIIHDQTLIGLQDKSLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH----------LKKQGAEF 170 F E R F ++G+ ICEDIW+++ + L Q + Sbjct: 119 DVFDELRYFEPAAKTFVWQLCGKKIGVTICEDIWQHTPAARETSYHRDPVEDLAAQSPDL 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +L+ASP+ + +R E + P++ NQVGG D LIFDG S +G +L Sbjct: 179 LINLSASPFRRGRSLERIETCQAIAKTLKCPVLLCNQVGGNDSLIFDGRSVAVNGDAELI 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 K F E + + Y + +S D T E A VL LRDY +K Sbjct: 239 DLAKGFEEDFLLVDLSYPSE-----EISHDVDHT--------EELRKALVLGLRDYFRKQ 285 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F K +G+SGGIDSA+ AA+AV+ALGKENV +++P ++TS +S+EDA K LG + Sbjct: 286 GFSKACLGISGGIDSAVVAALAVEALGKENVLGVLMPSRFTSKRSIEDARQLVKNLGIDH 345 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I + + L+ + + + EN+Q+R+RG ILMALSN ++L+T NKSE Sbjct: 346 REISIEEPFQCYLDLLQPHFEGKQPDVTEENLQARVRGMILMALSNKHGYIVLSTGNKSE 405 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++GY TLYGD GG + D+ K V+ LA N+ EVIP +I++++PS Sbjct: 406 LAMGYATLYGDTVGGMAVISDVAKMDVYALAESYNAE---------EEVIPQTIIDRAPS 456 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENE--ESFINNDQEYNDETVRYVEHLLYGSEYK 528 AELR Q D +SLP Y ++D ++K VE I + +Y + V+ + ++ +EYK Sbjct: 457 AELREGQLDSDSLPDYEVIDTVVKAYVEEHMCPQAIADKFDYPIDLVKDLIGRVHCNEYK 516 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 RRQ G ++++++F R +PI K+ Sbjct: 517 RRQMAPGLRVSSRAFTIGRRFPIVQKW 543 >gi|87301245|ref|ZP_01084086.1| putative glutamine dependent NAD(+) synthetase [Synechococcus sp. WH 5701] gi|87284213|gb|EAQ76166.1| putative glutamine dependent NAD(+) synthetase [Synechococcus sp. WH 5701] Length = 568 Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 205/573 (35%), Positives = 298/573 (52%), Gaps = 35/573 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD+ GN A+ + A G DL++ EL + GYPP DL+ + S + Sbjct: 1 MRLALAQINPLVGDLRGNAAQLLEHSQRAALAGADLVISPELSLWGYPPRDLLLRPSLLL 60 Query: 65 ACSSAIDTLKSDTHDGGAGI---VVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ L ++ G + V ++ + N+ ++ G+ V K LP+Y Sbjct: 61 EQGRVLEALAAELPPGLGLLLGLVDPIAGRELPALYNAAALVQRGSWRVVARKRLLPSYD 120 Query: 122 EFHEKRTFISG----YSNDPIVFRDIRLGILICEDIWKNSNICKH----------LKKQG 167 F E+R F G P R RLG+ ICED+W + H L Q Sbjct: 121 VFDERRYFQPGDQACLLEWPGADRVWRLGLTICEDLWVEERVQGHRLAGADPIAELAPQR 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + L +L+ASP+ K + R E+ + + P++YVNQVGG DEL+FDG SF D Q Sbjct: 181 PDLLLNLSASPFAQGKPELRLELAGAAAARLGCPVVYVNQVGGNDELVFDGGSFVIDPQA 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ Q+ Q + W D + A+ E + VL + DY Sbjct: 241 RVLRQLP--CAQVALELWEPD-------LLDTAPAAPASPAPPPLEQLFRVLVLGVHDYA 291 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +K F +V++GLSGGIDSAL A IA ALG E VQ +++P Y+S S DA A LG Sbjct: 292 RKCGFQRVVLGLSGGIDSALVAVIAAAALGPEQVQALLMPSPYSSAGSRLDAIDLANRLG 351 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 + + I L+ F + P G+ AEN+QSRIRG +LMA++N +LL+T N Sbjct: 352 LPHQTVAIKTLMEAFDHSLDPVFGGAPQGLTAENLQSRIRGTLLMAVANQQGRLLLSTGN 411 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVIPP 462 KSE++VGY TLYGDM+GG + DLYKT VF+L W ++ GL E+I Sbjct: 412 KSELAVGYCTLYGDMNGGLAVIGDLYKTTVFRLCHWLDTEAAADCRQSLGLPASGELIGA 471 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVE 519 +I K PSAELRP Q D +SLP Y LD +++ +E + E I Q + E R V Sbjct: 472 AIRTKPPSAELRPDQRDTDSLPDYDQLDPLLRAYIEELRSPEELIVQGQ-VDGELARRVY 530 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 LL +E+KRRQA K++ ++FG PI+ Sbjct: 531 RLLRTAEFKRRQAAPLLKVSGRAFGGGWRMPIA 563 >gi|126179381|ref|YP_001047346.1| NAD+ synthetase [Methanoculleus marisnigri JR1] gi|125862175|gb|ABN57364.1| DNA-directed RNA polymerase, subunit H [Methanoculleus marisnigri JR1] Length = 529 Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 199/560 (35%), Positives = 294/560 (52%), Gaps = 45/560 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI++ Q+N VVGD+AGN + EA R DLI+ EL ++G PP DL+ + FI Sbjct: 1 MKISLLQVNTVVGDLAGNAGRIAAGTREAARHRPDLIVAPELSLTGCPPRDLLLQAGFIT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 + +D L + D ++VGF + G + N+ +L G + K + Sbjct: 61 RSLAVLDDLAAGLADAPP-VLVGFAEPNPAGTGRPLFNAAALLRDGEVRGTFRKTAI--S 117 Query: 121 SEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F E R F + P F + +G+ I E+I + + + +L+ASP Sbjct: 118 GSFDEGRYF-EPAAGSPGTFHLGERTVGVAIGEEIRCGGEV--------PDVIVNLSASP 168 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + + R E+ + + I+ N VGG D+L+FDG S F L + F+E Sbjct: 169 FVIGRQCLREEMFSRAAKENRVAIVSANLVGGNDDLVFDGRSVAFSADGTLIARGAAFAE 228 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + + + + DD I + A VL RDYV K F V +G Sbjct: 229 EIVTIDL---ARPAPQAVAPDDQGPESEI--------WRALVLGTRDYVHKCGFRSVHLG 277 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDS+L AA+A ALG+ENV ++LP +TS +S+EDA A LG + +PI + Sbjct: 278 LSGGIDSSLVAAVAARALGQENVLGVLLPSPHTSAESIEDARELAANLGIRVQCIPIAPM 337 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + F S ++ I EN+Q+RIR +LMAL+N +MLL+T NKSE++VGY TL Sbjct: 338 MEAFDSGLADVFAGLAPDITEENLQARIRATVLMALANKFGSMLLSTGNKSEVAVGYCTL 397 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD +GG + + D+ K V+++A W N+ VIP +L+K PSAELRP QT Sbjct: 398 YGDAAGGLSVIADVPKGMVYRIARWLNAE---------RPVIPERVLKKPPSAELRPGQT 448 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQ----EYNDETVRYVEHLLYGSEYKRRQAPV 534 DQE LPPY +LD I+ R+++ ES D+ Y +ETVR V ++ +E+KRRQAP Sbjct: 449 DQEILPPYDLLDAILHRLIDCLES---PDEIIAAGYPEETVREVAGMVERAEFKRRQAPP 505 Query: 535 GTKITAKSFGRDRLYPISNK 554 G K+T ++F D PI+ K Sbjct: 506 GIKVTDRAFSTDWHMPIAAK 525 >gi|206900131|ref|YP_002251717.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum H-6-12] gi|206739234|gb|ACI18292.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum H-6-12] Length = 527 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 193/563 (34%), Positives = 302/563 (53%), Gaps = 51/563 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+NP +GDI GN+ K + A +A D+I+F EL + GYPP DL+ + Sbjct: 1 MKITLAQINPTIGDIEGNLIKIKNAILKAISDKSDVIIFPELSLLGYPPFDLLKNRIIRD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + I++G P + +SV + +I DK N Sbjct: 61 KLERALQKILEEKF--SINILLGAPYFENNKTYDSVYWIKENKVIKRIDKFYFSN-DPLG 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDI---WKNSNICKHLKKQGAEFLFSLNASPYYH 181 + F + I D ++ ILI +D + S +LK + + +++S YY Sbjct: 118 QNDYFSKDAKPEYIEINDKKIAILISDDTLFSYDFSGFNDYLK--NSNLILIVSSSFYYF 175 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE--- 238 K K++ E ++ ++ +IY+NQVGG EL+F+G S + + F+ + F+E Sbjct: 176 GKRKEKIEKISNFAKNLGKKVIYINQVGGNGELVFEGGSLVISEEGTVIFEGEIFNEDIK 235 Query: 239 ----QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 ++ H ++ LS YN+ V+ LRD+++K+ F K Sbjct: 236 TIDLESLFPILHKNEDLSFL---------------------YNSLVMGLRDFIKKSGFRK 274 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 +IGLSGGIDSAL A IA +ALGK+NV + LP YTS +S+EDA ++ LG ++ ++P Sbjct: 275 AVIGLSGGIDSALVACIATEALGKDNVLGVSLPSIYTSKESIEDAKILSQNLGIEFRIIP 334 Query: 355 IHDLVNHFFSLMSQF-LQEEPSGIVA-ENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I ++ F+S + + E+P VA EN+QSRIRGN+LM +SN +LL T N+SE Sbjct: 335 ISEI---FYSYLKELNPSEKPVMDVAEENLQSRIRGNVLMFISNREGYLLLATGNRSEAL 391 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 GY TLYGD +G + D+YKT V++LA++ N E+IP +I+ K+PSAE Sbjct: 392 TGYCTLYGDTAGAIEVIGDIYKTTVYELANYINKE---------KEIIPQNIITKAPSAE 442 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQ 531 LRP Q D++SLPPY +LD I+K V+ + Q Y +E V+ V + SEYKR+Q Sbjct: 443 LRPGQKDEDSLPPYSVLDPILKAYVDENKPMEEILQMGYKEELVKTVIEKVEKSEYKRKQ 502 Query: 532 APVGTKITAKSFGRDRLYPISNK 554 P ++ +K+ R+R +P+ K Sbjct: 503 IPPVLRVRSKNPLRERFFPLVYK 525 >gi|42525160|ref|NP_970540.1| NH(3)-dependent NAD(+) synthetase [Bdellovibrio bacteriovorus HD100] gi|39577371|emb|CAE81194.1| NH(3)-dependent NAD(+) synthetase [Bdellovibrio bacteriovorus HD100] Length = 540 Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 201/567 (35%), Positives = 293/567 (51%), Gaps = 42/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NPV+ D N K +A ++ DL++F E + GY P DL+ ++ + Sbjct: 1 MRIAVAQINPVLADFQFNKEKILDFVNQAVQRKCDLVVFPECTLFGYHPFDLLEREKLVA 60 Query: 65 ACSSAI-DTLKSDTHDGGA--GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + D +K + G G++ P + NS ++ G K LP Sbjct: 61 KQEAEFKDLIKKLPKNIGVIMGLITRNPAKKGRPYFNSAALIAKGEKPRFFHKQLLPTGD 120 Query: 122 EFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEF 170 F E R SG S + ++ + + ICEDIW N +KKQ + Sbjct: 121 VFDEARFIESGDVSKNYFKWKGKKFFLTICEDIWAWPDAKGNSPYRENPLAKVKKQKIDM 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +L+ASPY+ K+K+R + ++ + PI+YVN VG QDE+IFDG SF D + + Sbjct: 181 VINLSASPYFVGKMKQREYVTQKTAAYFNAPIMYVNLVGAQDEIIFDGGSFVLDKKGKKL 240 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + FSE + + + L WN L+ E A VL +RD+ +K Sbjct: 241 LTCQQFSEDINVIDLN---TLEVWNKNPK---------LEAIEELRRALVLGIRDFCEKT 288 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 KV +GLSGGIDSA+ A +AVDALG NV + LP + +PQSL A A +G + Sbjct: 289 GIKKVHLGLSGGIDSAVVAVLAVDALGPANVVGVGLPGPFNAPQSLTLAKDLASNMGVDF 348 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I + +++ L E IV EN+Q+R+RG LMA SN +MLLTT NKSE Sbjct: 349 KTVEIGPMYESVLKALNKGLGLEGFSIVNENLQARLRGLTLMAWSNKENSMLLTTGNKSE 408 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 + GY TLYGDM GG PL DL K QV+ LA + N G EVIP I+++ PS Sbjct: 409 YASGYSTLYGDMCGGLAPLGDLTKAQVYALARYYNKQG---------EVIPQEIIDRPPS 459 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 AELRP+Q DQ+SLP Y LD + +VE T +++ +L +E+KR Sbjct: 460 AELRPNQKDQDSLPEYDDLDKAVTYLVEKSGP-------AKSATEKWLLPVLMRTEFKRW 512 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFRD 557 QAP K++ SFGR R YP++++ R+ Sbjct: 513 QAPPILKVSQHSFGRGRRYPVAHRARE 539 >gi|212703476|ref|ZP_03311604.1| hypothetical protein DESPIG_01520 [Desulfovibrio piger ATCC 29098] gi|212673090|gb|EEB33573.1| hypothetical protein DESPIG_01520 [Desulfovibrio piger ATCC 29098] Length = 550 Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 179/574 (31%), Positives = 292/574 (50%), Gaps = 48/574 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q N V GD+AGN + A EA QG DL + EL + G P + + F + Sbjct: 1 MKIALLQCNTVTGDVAGNAERILAAVREAAAQGADLCVTPELALCGVAPGSYLRAEDFAE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD--QEGVL-NSVVILDAGNIIAVRDKINLPNYS 121 C + + L DG ++VG P G+L N+ +++ G V K+ Y Sbjct: 61 GCKAGLQMLADALQDGPP-LLVGAPVASVYASGLLSNAAILVQKGRWSVVSRKV-YQTYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICED-------IWKNSNICKH-----LKKQGAE 169 + E R F G S + RLG+++C++ WK H L ++G + Sbjct: 119 QDSEARFFDRGVSCGILALDGWRLGVVLCQESATEDGAFWKTQYASGHNPLMELVQRGVD 178 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + + A P+ + ++++ + H+ + VN VGG D +++G S FD Q+ Sbjct: 179 AIVHMAAVPFSKGVQRLSEQMLSHVAARHHVHLFSVNMVGGNDSRVYNGQSLAFDPTGQI 238 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI----PLQEEEADYNACVLSLRD 285 + K F+E + D+A + I P EA ++A L +RD Sbjct: 239 LARGKAFAEDVLLV----------------DTAGSGGIVHPRPACLPEAIWDALTLGVRD 282 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 +V K K I+ LSGG+DSAL +A +ALG +NV +++P Y+S S+ D+ A+ Sbjct: 283 FVHKCGLEKAIVALSGGMDSALVLCVAAEALGADNVTAVLMPSPYSSEGSVSDSLELAEN 342 Query: 346 LGCKYDVLPIHDLVNHFFSLMS---QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 LG + LPI ++ F + ++ + P EN+Q+RIRG ++ +L+N ++A++ Sbjct: 343 LGVRTLTLPIEPVMESFSAALAPGLDLFETFPGDTTFENLQARIRGIMVSSLANRARALV 402 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T NKSE +VGY TLYGD G + DL KT+V+ LA W N H + +IP Sbjct: 403 LNTGNKSECAVGYSTLYGDTVGALGVIADLTKTEVYTLAGWYNHHRQAT-------IIPQ 455 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLL 522 +I +K+PSAELRP Q D +SLPPY +LD +++ ++ ++ Q+ ++ + V L Sbjct: 456 AIFDKAPSAELRPGQKDSDSLPPYDVLDPVLESLIFAGQT-AAQPQDADEGLRKEVRRKL 514 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + +E+KRRQ P+G I+ FG P++ ++R Sbjct: 515 FAAEFKRRQEPLGLHISRMPFGTGWQVPVAGRYR 548 >gi|110668487|ref|YP_658298.1| NAD(+) synthase (glutamine-hydrolyzing) [Haloquadratum walsbyi DSM 16790] gi|109626234|emb|CAJ52692.1| NAD(+) synthase (glutamine-hydrolyzing) [Haloquadratum walsbyi DSM 16790] Length = 561 Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 192/578 (33%), Positives = 285/578 (49%), Gaps = 47/578 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KIAI Q NP+VGD++GN + A E+A G+ LI+ EL + GYPP DL+ ++ Sbjct: 1 MSLPIKIAIVQHNPIVGDVSGNCTQIIEAYEQATDAGVGLIITPELALLGYPPRDLLHRQ 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINL 117 A +A++TL+ T G IV D+ + NS + G +K L Sbjct: 61 RVRDAEQTALETLRHLTEQGPPLIVGHTASADRTSGPPLTNSATVFVDGEATVQYNKRLL 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ----------G 167 P Y F E R F G + D +GI ICED W + + + Q Sbjct: 121 PTYDIFDEHRYFSRGTESQTTHIDDTTVGITICEDAWYDHEVTGQQRHQTDPIAPYETAD 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ- 226 + L +L+ASPY NK R + + P+++ NQVGG D+++FDG SF D Sbjct: 181 VDLLVNLSASPYRVNKSSARFDRFGRHARRIDAPVVFANQVGGNDDILFDGTSFILDSDG 240 Query: 227 QQLAFQMKHFSE------QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 Q+A +N T + +Q M + Sbjct: 241 SQIASATSGEPRVLIGQPKNNSTSGTTPSETAQLRRMLE--------------------- 279 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L +RDY+ K+ F VIIGLSGGIDS++ AA+A +A+G NV I LP T+ + DA Sbjct: 280 LGIRDYLDKSGFDDVIIGLSGGIDSSVTAALAAEAIGPSNVHGITLPSAITTENNRTDAE 339 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNILMALSNHSK 399 A+ LG ++D + I L ++ ++ GI EN+Q+R+RG +LM +SN Sbjct: 340 RVAQNLGIQFDEIGIEHLSQSLLDAINGVTPGDDTRGITRENVQARVRGLLLMGVSNDLD 399 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 A++LT NKSE +VGY TLYGD G PL D K +V+ LA N+ T + Sbjct: 400 ALVLTPDNKSEAAVGYCTLYGDAVGAIAPLGDCTKRRVYALAEDFNTDIPTWA---DSTP 456 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN--DETVRY 517 IP S+++K+P+AEL QTD + +PPY I D ++ + V ++ +E N E V+ Sbjct: 457 IPHSVIQKAPTAELAEGQTDVDDIPPYEITDAVVSQYVGDKYPLTQIVEETNATKEQVKT 516 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V + SE+KR+Q P ++T K+F YPI+ + Sbjct: 517 VVENITQSEFKRKQTPPALRVTTKAFDSGWRYPIAASY 554 >gi|303327761|ref|ZP_07358201.1| glutamine-dependent NAD+ synthetase [Desulfovibrio sp. 3_1_syn3] gi|302862122|gb|EFL85056.1| glutamine-dependent NAD+ synthetase [Desulfovibrio sp. 3_1_syn3] Length = 552 Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 188/573 (32%), Positives = 291/573 (50%), Gaps = 44/573 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q N V GD+AGN + A +A R+G DL + EL + G P + F Q Sbjct: 1 MKIALLQCNSVTGDVAGNQERILEAARQAAREGADLCVTPELALCGVAPGHYLRAVDFAQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD--QEGVL-NSVVILDAGNIIAVRDKI--NLP- 118 C +A+ L DG ++VG P G+L N+ V++D G K+ N+ Sbjct: 61 GCRTALRNLAEALKDGPP-LLVGAPVPSVYAAGLLSNAGVLVDKGQWQVASRKVYQNMGR 119 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICED-------IWKNSNICKH-----LKKQ 166 N + + R F G S + RLG+++CED WK H L ++ Sbjct: 120 NSGQDDDVRYFDRGVSCGILSLGGWRLGVVLCEDAVAEDGAFWKTQYASGHNPLMELVQR 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 G + + + A+PY + +++ + H+ + VN GG D +++G S FD Sbjct: 180 GVDAVVHMAAAPYCVGAQEAGEHMLSHVAARHHIHLFSVNPAGGNDSRVYNGQSLAFDPT 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 QL + K F+E + + + S + EEA + A L RD+ Sbjct: 240 GQLLARGKAFAEDVLVVD------------TARGSGRVEELCRSAEEAGWRALTLGTRDF 287 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K + I+GLSGG+DSAL IAV+ALG + V +++P YTS SL DA A L Sbjct: 288 VRKCGAERAILGLSGGMDSALVCCIAVEALGADKVTGVLMPSPYTSEDSLTDARRLADNL 347 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEP---SGIVAENIQSRIRGNILMALSNHSKAMLL 403 G +LPI L+ F + + L P + EN+Q+RIRG +L +L+N ++A++L Sbjct: 348 GVSTVILPIEPLMQAFEATLKPGLDLFPPYAGEVTFENVQARIRGTLLTSLANRARALVL 407 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T NKSE ++GY TLYGD G + DL K+QV+ +A W N+H G E+IP + Sbjct: 408 NTGNKSEGAMGYCTLYGDAVGALGVIADLTKSQVYAVARWYNAH---RG----AEIIPRN 460 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLY 523 + +K+PSAELRP Q D +S+PPY LD +++ ++E D+ +D R V L+ Sbjct: 461 VFDKAPSAELRPGQKDADSIPPYEELDPMLEELLEPTAQ--GQDKPMSD-VCREVRDKLF 517 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +E+KRRQ P+ ++ FG P++ ++R Sbjct: 518 RAEFKRRQEPLALHVSRVPFGAGWQAPVAGRYR 550 >gi|291514607|emb|CBK63817.1| NAD+ synthetase [Alistipes shahii WAL 8301] Length = 526 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 188/562 (33%), Positives = 303/562 (53%), Gaps = 45/562 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLN +GD+ GN +K + +A Q DL++F E +SG P DL+ K +F++ Sbjct: 1 MKIAIAQLNYTIGDVDGNASKIIDSIHKAKAQHADLVIFAEQAVSGTPAFDLLRKTTFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A+ + S DG A IV G P +G +++ ++ ++ K Y Sbjct: 61 LCEDALVEIAS-CCDGIAAIV-GLPILTADGTISAAALIQDRKVLRYIGK----KYITAR 114 Query: 125 EKRTFI---SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 + F+ GY I + + I++ +D+ + + Q E + S+NA Y Sbjct: 115 REMGFLVPSKGYEYATI--KGHKCAIIVGDDLSRERDF-----DQSVETVISINARKYGK 167 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 + R+E++ ++ VNQVGG ++++DG S + + +L MK+F E Sbjct: 168 GTMTYRYEMMRNLAFVESKNLVLVNQVGGSTDIVYDGTSGALNSRGELVLMMKNFEE--- 224 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD---YNACVLSLRDYVQKNNFHKVIIG 298 D Q+ + + SA + IP + Y A LRD+ +KN + K IG Sbjct: 225 ------DFQI----FDTKASARPITIPSTYNDRTRLVYEAARCGLRDFFRKNGYRKASIG 274 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSA+ A+IA DALG ENV+ +++P ++S +S+EDA A+ LG +Y+V+PI ++ Sbjct: 275 LSGGIDSAVVASIAADALGAENVRALLMPSPFSSLESVEDAKELARNLGIEYNVIPISEI 334 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + + + ENIQ+RIR +LMAL N + +LL +SNKSE ++G TL Sbjct: 335 YTSVVNTLKPVIGGTEFDATEENIQTRIRTVLLMALQNKTDYILLNSSNKSENALGLCTL 394 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD +G F+P DLYK++++ +A + N T G IP SIL K PS+EL P Q Sbjct: 395 YGDTAGAFSPTGDLYKSEMYDVARYINR---TQG-----NPIPESILTKEPSSELHPGQK 446 Query: 479 DQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 D + LPPY ++D I+ R++E + E +N ++ E V + ++ +E KR Q P Sbjct: 447 DSDILPPYEVVDAILFRMIEEGQHREEIVN--AGFDSEVVEKIHGMIMRNEKKRYQFPPV 504 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 ++++ +FG +RL P++NK+ D Sbjct: 505 LRLSSCTFGHERLMPLTNKYGD 526 >gi|160901039|ref|YP_001566621.1| NAD+ synthetase [Delftia acidovorans SPH-1] gi|160366623|gb|ABX38236.1| NAD+ synthetase [Delftia acidovorans SPH-1] Length = 566 Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 216/578 (37%), Positives = 316/578 (54%), Gaps = 41/578 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I IAQLNP VGDIAGN+A+ A A R DL++F EL + GY P DL+ + +F + Sbjct: 2 LRITIAQLNPTVGDIAGNVARMAEAAARAARAQADLLVFPELSLCGYYPGDLLDEPAFRE 61 Query: 65 ACSSAIDTLKSDTHDGGA-GIVVGFP-RQDQEG--VLNSVVILDAGNIIAVRDKINLPNY 120 + L T V+G P R G + NS+++L G + DK LP Y Sbjct: 62 RLEQGLQQLLQATRQWPQLHWVIGAPTRASGPGKPLHNSLLVLKDGAVRLRYDKQLLPTY 121 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKN------SNICKHLKKQGAEFLFS 173 + F E+R F G ++ ++G L+CED W + +N + + + S Sbjct: 122 NIFDERRHFEPGPDAAKVLRIGQAQVGFLVCEDGWNDAGADYATNPFARMADAAPDLVVS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVH-LPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +NASP + K ++RHEI GQ + H LPI+YVNQ+GGQD+++FDGASF + + + F+ Sbjct: 182 INASPSHLGKREQRHEIF-GQAATRHGLPILYVNQIGGQDQIVFDGASFAVEPGRGVVFE 240 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP---LQEEEADYNACVLSLRDYVQK 289 + F E + T Q ++ M +P L E VL LRDY ++ Sbjct: 241 AERFVE-DLRT-----LQFDDGRFLDAAGQPCMSVPAEGLPTMEFYRRQIVLGLRDYARR 294 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F + ++G SGGIDSAL A+A +ALG +NV + +P +++S S++D+ + LG Sbjct: 295 CGFTRAVVGSSGGIDSALTLALAAEALGADNVVAVTMPSRFSSSGSVDDSVILCRNLGIT 354 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 PI +LV+ + + G+ EN+Q+RIRG LM SN +LLTT NKS Sbjct: 355 LHEHPIRELVDGYARQFEASFGQPLQGLPLENLQARIRGTTLMEYSNAFGHLLLTTGNKS 414 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 EISVGY TLYGD +GG L DLYKT+VF+L+ N ++G E+IP +I++K P Sbjct: 415 EISVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHVNR---SAG----RELIPQAIIDKPP 467 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENE----------ESFINN--DQEYNDETVRY 517 SAEL P Q D++SLPPY +LD+I+K +E E F+ Q E V Sbjct: 468 SAELAPDQKDEDSLPPYAVLDEILKYAIEGRHLSTAEYGTAERFVTQLLGQPGGAELVDR 527 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V+ +++ SEYKRRQAP ++ ++FG R PI+ + Sbjct: 528 VKRMIFRSEYKRRQAPPILRVRPRAFGTGRQMPIAAHY 565 >gi|282897595|ref|ZP_06305595.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Raphidiopsis brookii D9] gi|281197518|gb|EFA72414.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Raphidiopsis brookii D9] Length = 414 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 177/416 (42%), Positives = 244/416 (58%), Gaps = 21/416 (5%) Query: 149 ICEDIWKNS----------NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHV 198 ICED+W + N L G + + +L+ASPY K K R ++ + Sbjct: 3 ICEDLWNDEEFWGKKCYAVNPIADLSVVGVDLIVNLSASPYTVGKQKTREAMLRHTAVNF 62 Query: 199 HLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 PIIY NQVGG D+LIFDG SF + Q ++ ++ + F+ + E ++Q + S Sbjct: 63 QQPIIYTNQVGGNDDLIFDGYSFAVNSQGEILYRGRGFTPDFLIVE--FNQHTQEVELAS 120 Query: 259 D-DSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALG 317 + D I E+E ++A VL ++DYV+K F +VI+GLSGGIDSAL AAIA ALG Sbjct: 121 NPDQNPIAPIYESEDEEIWHALVLGVKDYVKKCRFSQVILGLSGGIDSALVAAIATAALG 180 Query: 318 KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 KENV +++P Y+S S+ DA + LG K +LPI +L+ F + + GI Sbjct: 181 KENVLGVLMPSPYSSQHSVSDALKLGQNLGIKTQILPIGELMKSFDHTLFELFTGTEFGI 240 Query: 378 VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 ENIQSRIRG +LMA+SN +LL+T NKSEI+VGY TLYGDM+GG + D+ KT+V Sbjct: 241 AEENIQSRIRGILLMAISNKFGYLLLSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTRV 300 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV 497 + + +W N EVIP +IL K PSAEL+P QTDQ+SLPPY ILDDI++R++ Sbjct: 301 YSICNWLNGQN-------QQEVIPQNILTKPPSAELKPGQTDQDSLPPYNILDDILQRLI 353 Query: 498 ENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 +S +D V V L+ GSE+KRRQA G KIT ++FG PI+ Sbjct: 354 NQHQSVEEIIAGGHDLGIVNRVIKLVAGSEFKRRQAAPGLKITDRAFGTGWRMPIA 409 >gi|313157073|gb|EFR56503.1| NAD+ synthase [Alistipes sp. HGB5] Length = 526 Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 188/562 (33%), Positives = 301/562 (53%), Gaps = 45/562 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLN +GDI GN +K + +A Q DL++F E +SG P DL+ K +F++ Sbjct: 1 MKIAIAQLNYTIGDIDGNASKIIDSINKAKAQRADLVIFAEQAVSGTPAFDLLRKTTFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A+ + S DG A IV G P +EG +++ ++ ++ K Y Sbjct: 61 LCEDALVEIAS-CCDGIAAIV-GLPILTREGTISAAALIQDRKVLRYVGK----KYITAR 114 Query: 125 EKRTFI---SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 + F+ G+ I + + I++ +D+ + +H + E + S+NA Y Sbjct: 115 REMGFLVPSKGFEYATI--KGHKCAIIVGDDLSR-----EHDFDKSVETVISINARKYGK 167 Query: 182 NKLKKRHEIVTGQISHVHLP-IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE-- 238 + R++++ +S V I+ VNQVGG ++++DG S F+ + +L MK F E Sbjct: 168 GAMTYRYDMMR-HLSFVEAKNIVLVNQVGGATDIVYDGTSGAFNNRGELVLMMKQFEEDF 226 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 Q F T+ Y +D +Y A LRD+ KN + K IG Sbjct: 227 QIFDTKAQNPPVGVPSTY--NDRTRMVY----------QAARCGLRDFFLKNGYKKACIG 274 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSA+ A +A DALG NV+ ++LP +++S S+EDA A+ LG +Y+V+PI ++ Sbjct: 275 LSGGIDSAVVACLAADALGAGNVRALLLPSQFSSDHSVEDAKKLAENLGIEYNVIPITEI 334 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + + + ENIQ+RIR +LMA+ N + +LL +SNKSE ++G TL Sbjct: 335 YTSVVNTLKPVIGGREFDATEENIQTRIRTVLLMAVQNKTDYILLNSSNKSENALGLCTL 394 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD +G F+P DLYK++++ +A + N VIP +IL+K PS+EL P Q Sbjct: 395 YGDTAGAFSPTGDLYKSEMYDVARYINR--------TFGNVIPENILDKEPSSELHPGQK 446 Query: 479 DQESLPPYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 D + LPPY ++D I+ R++E + E +N ++ E V + ++ +E KR Q P Sbjct: 447 DSDILPPYEVVDAILLRMIEEGQHREEIVN--AGFDSEVVEKIHCMIMRNEKKRYQFPPV 504 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 +++ SFG +RL P++NK+ D Sbjct: 505 LRLSMCSFGHERLMPLTNKYGD 526 >gi|325280766|ref|YP_004253308.1| NAD+ synthetase [Odoribacter splanchnicus DSM 20712] gi|324312575|gb|ADY33128.1| NAD+ synthetase [Odoribacter splanchnicus DSM 20712] Length = 522 Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 192/550 (34%), Positives = 302/550 (54%), Gaps = 37/550 (6%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IAI QLN GDI GN K A ++A Q +LILF EL +SG P+DL+ ++ F+ AC Sbjct: 3 IAIPQLNYKAGDIQGNSEKIISAIQKAQNQKAELILFPELAVSGALPQDLLEREEFVNAC 62 Query: 67 SSAIDTLKSD-THDGGAGIVVGFPRQDQE-GVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 AI+ + + TH +VG P D E G++ NS + G ++ K L +Y F Sbjct: 63 RMAIEKIAATCTHIAA---IVGAPNLDSENGIMYNSAYFIQHGEVVDGVHKNILSDYDIF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R FI+G N PI +++ + IL D +++ I K F+ + +P+ + Sbjct: 120 SESRYFIAGEDNTPIRYKNQNIRILF--DEYESEYIDKT-----DSFVIFIGMTPFTVDS 172 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +++ +++ + +I VN VG ++FDG S ++ + + A Q+ F+E Sbjct: 173 SREKRKVLATLAQKYNKNLIAVNHVGSYTSVLFDGNSMVYNYKGKKACQLNEFAE----- 227 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDYVQKNNFHKVIIGLSG 301 D QL N + T+ P+ ++ + A V +RDY +KN F K I+GLSG Sbjct: 228 ----DFQLIDTNKLG---TPTLQSPVSQDRIALLHKALVFGIRDYFEKNGFQKAILGLSG 280 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+ AA+A +ALG +NV +++P Y++ S++DA A A+ +G ++ + I + Sbjct: 281 GIDSAVVAALAAEALGAQNVMGLLMPSCYSTEHSVQDALALAENIGMPHETIAIKAIYEQ 340 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + + +++P + EN+Q+R RG ++MA+SN + L TSNKSE +VGYGTLYGD Sbjct: 341 YLEALHPLFKDQPFNVAEENLQARTRGMLVMAMSNKYGYIPLNTSNKSEAAVGYGTLYGD 400 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 + G + D++KT ++ LA + N + I +IP + ++K+PSAELRP+Q DQ+ Sbjct: 401 LCGSLGTIGDVFKTDIYALARYINRNQI---------IIPENTIQKAPSAELRPNQKDQD 451 Query: 482 SLPPYPILDDIIKRIV-ENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLP Y LD I+K + EN + Y TV V ++ +EYKR Q P KI+ Sbjct: 452 SLPDYNELDGILKLYLEENHSPEMIIKAGYPKATVEKVIQMVKRNEYKRAQCPPIIKISK 511 Query: 541 KSFGRDRLYP 550 K+FG R YP Sbjct: 512 KAFGYGRKYP 521 >gi|297171548|gb|ADI22546.1| NAD synthase [uncultured Oceanospirillales bacterium HF0500_09M11] Length = 339 Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 153/352 (43%), Positives = 220/352 (62%), Gaps = 19/352 (5%) Query: 208 VGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI 267 +GGQDEL+FDGASF DG+ + Q F E + L + + + Sbjct: 1 MGGQDELVFDGASFVVDGEAGVCVQGASFEEALVPVD------LGREGGALKVRGEVLPV 54 Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 P ++EE+ Y A VL+ RDYV KN F ++GLSGGIDSAL A+AVDALG + V+ +M+P Sbjct: 55 P-EDEESLYRALVLATRDYVNKNGFKGALLGLSGGIDSALTLAVAVDALGPDRVEAVMMP 113 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 ++YT+ S+EDA AKAL Y LPI N F S++ + + EN+Q+R R Sbjct: 114 FRYTADISIEDAEQQAKALRVHYRSLPIEPAFNGFMSILEEAFADHQPDTTEENLQARCR 173 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMALSN + +++LTT NKSE++VGY TLY D++GGF+ LKD++KT V+++A WRN Sbjct: 174 GVLLMALSNKNGSVVLTTGNKSEMAVGYATLYRDVAGGFSVLKDVFKTWVYRVARWRNQK 233 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE---ESFI 504 +E+IP ++ + PSAEL P Q D +SLP Y LD I++R VE + E+ I Sbjct: 234 A-------GSEIIPERVITRPPSAELAPDQVDSDSLPGYDELDAILERYVEQDMSAEAVI 286 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + ++ +TV V L +EYKRRQA VG +++ ++FG+DR YPI+N +R Sbjct: 287 RDG--FDRDTVYRVVKLTDRNEYKRRQAAVGPRVSRRAFGKDRRYPITNGWR 336 >gi|284104806|ref|ZP_06386155.1| NAD+ synthetase [Candidatus Poribacteria sp. WGA-A3] gi|283830185|gb|EFC34443.1| NAD+ synthetase [Candidatus Poribacteria sp. WGA-A3] Length = 391 Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 157/379 (41%), Positives = 217/379 (57%), Gaps = 28/379 (7%) Query: 202 IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS 261 + Y N VGGQDE++FDG S D + + F E+ + + +D+ + Sbjct: 13 VSYTNMVGGQDEVVFDGNSLIVDRTGTVITRAGAFEEELLVADLSFDRPRETNPVGREKR 72 Query: 262 ASTMY------------------IPLQ------EEEADYNACVLSLRDYVQKNNFHKVII 297 A Y +PL+ + E Y A V +RDYV+KN F +V+I Sbjct: 73 AGQRYPVKRVRLASVVRRKPNKPVPLKNPPVPHDVEEIYQALVTGVRDYVRKNRFQRVLI 132 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +SGGIDSAL A IAVDALG + V + +P +TS +S DA A K L + +PI Sbjct: 133 AVSGGIDSALTAVIAVDALGPDRVTGVFMPSPFTSRESRVDANALMKVLNVRLLTIPITR 192 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 L + +S E + EN+Q+RIRG I+MALSN ++LTT NKSEISVGY T Sbjct: 193 LWKQYVRTLSSTFGERAPDVTEENLQARIRGTIVMALSNKFGHLVLTTGNKSEISVGYAT 252 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF +KD+ K V+ LA +RN + + VIP I++++PSAEL+P Q Sbjct: 253 LYGDMAGGFAVIKDVSKILVYDLARYRNRKAVDAHGA---AVIPQRIIDRAPSAELKPDQ 309 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ++LPPY +LD I++ VE E S Q + +TV+ V L+ SEYKRRQAPVG Sbjct: 310 TDQDALPPYEVLDPILEAYVEKERSLQEIAGQGFPLQTVKRVMTLVDRSEYKRRQAPVGI 369 Query: 537 KITAKSFGRDRLYPISNKF 555 KIT K+ G+DR PI+N++ Sbjct: 370 KITQKALGKDRRMPITNRY 388 >gi|220904026|ref|YP_002479338.1| NAD+ synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868325|gb|ACL48660.1| NAD+ synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 560 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 183/575 (31%), Positives = 288/575 (50%), Gaps = 40/575 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q N V GD+AGN+ + A +A G +L + EL + G P + + F Sbjct: 1 MKIALLQCNSVTGDVAGNMQRILEASRQAAAAGAELCVTPELALCGVAPGHYLCAEDFAA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD--QEGVL-NSVVILDAGNIIAVRDKINLPNYS 121 C +A+D L + DG A ++VG P G+L N+ V++D G+ K+ Sbjct: 61 GCRTALDLLALELRDGPA-LLVGAPVPSVYASGLLSNAAVLVDKGSWQVASRKVYQGGAQ 119 Query: 122 ----EFHEKRTFISGYSNDPIVFRDIRLGILICED-------IWK-----NSNICKHLKK 165 + + R F G S + R+G+++CED WK N L + Sbjct: 120 GMGPDTDDSRYFDRGISCGILTIGGWRMGVVLCEDARSEEEAFWKIRYASGHNPLMELVQ 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 +G + L + A+PY +++ + H+ + VN VGG D ++ G S FD Sbjct: 180 RGVDALVHMTAAPYSEGAQAAGEHMLSHVAARHHVHLFSVNLVGGNDSRVYSGQSLAFDP 239 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 QL + K F+E + E + + S+ EE ++A L RD Sbjct: 240 TGQLLARGKAFAEDVLVVETAGSAPGGASGGKAPEPLSSCV-----EENLWHALTLGTRD 294 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 +V+K KVI+GLSGG+DS+L +AV+ALG ENV +++P Y+S S+ DA + A+ Sbjct: 295 FVRKCGAEKVIVGLSGGMDSSLVCCVAVEALGAENVTGVLMPSPYSSEGSVSDAHSLAQN 354 Query: 346 LGCKYDVLPIHDLVNHFFSLMS---QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 LG + LPI ++ F ++ + P EN+Q+RIRG +L +L+N + A++ Sbjct: 355 LGIRTVTLPIESVMKVFEQALAPGLELFTSRPGDTTFENLQARIRGVVLSSLANRAGALV 414 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T NKSE ++GY TLYGD G + DL KTQ + +A W N + EVIP Sbjct: 415 LNTGNKSEAAMGYSTLYGDTVGALAVIGDLTKTQTYAVARWYNEY-------RQAEVIPQ 467 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRY-VEHL 521 + K+PSAELRP Q D++SLPPY LD +++ ++ S N +R V + Sbjct: 468 QVFGKAPSAELRPGQKDEDSLPPYGQLDPVLEELLLPGAS----SAAANISPLRLEVRNR 523 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KRRQ P+ ++ FG P++ ++R Sbjct: 524 LFAAEFKRRQEPLALFVSRVPFGAGWQAPVAGRYR 558 >gi|319779599|ref|YP_004130512.1| NAD synthetase [Taylorella equigenitalis MCE9] gi|317109623|gb|ADU92369.1| NAD synthetase [Taylorella equigenitalis MCE9] Length = 545 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 180/565 (31%), Positives = 291/565 (51%), Gaps = 36/565 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ +AQLNP+ GD GN A +D++++ + SGY + L+ ++ ++ Sbjct: 3 IRFGLAQLNPITGDFDGNEKLMTDYLTIAKENNIDVLVYPKFSFSGYGSDGLMLREDYLN 62 Query: 65 ACSSAIDTLKSDTHDGGAG-IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +D D +G I D V +S+ ++++ I V + L Sbjct: 63 KEFQTVDHFGRVVADSFSGSIFTTSFDNDNNSVYSSLKLVESRPQIPVTHDMGL------ 116 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICE-DIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + F++ ND R+G I D W + + ++F L+A PY+ Sbjct: 117 -DSELFVTTTENDK------RVGYAIFSGDSWMKPELVDKALSKVSQFAIVLDAKPYHTE 169 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQQQLAFQMKHFSEQN 240 + E++ I L ++Y N +GG DE +FDG SF DG+ + A + N Sbjct: 170 SFNETVELLKEHICSKGLKVVYCNLLGGHDECVFDGTSFVMGEDGEVR-ALGTRFKQGLN 228 Query: 241 FMTEWHYDQQLSQWNYMSDDSAS----TMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 +D +++ ++ S S T+Y E ++A L+ +Y++KNNF +++ Sbjct: 229 VFEISIFDDEVTHHEFIEYSSNSLNSETLYELDCLEAEIWSALCLATNNYIRKNNFSQIV 288 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AIA DA+G +N + +P ++T+ S +DA L KYD++PI Sbjct: 289 LGLSGGIDSALVLAIASDAIGAQNCHALSMPSEFTAQMSNDDAKTMCSTLKVKYDIVPIR 348 Query: 357 DLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 + + L++ + + EN+Q+R+RG ILMAL+N A++L+T NKSE + Sbjct: 349 PMYQVIHDSLKPLLEQIETQSKDVTLENLQARVRGVILMALANKKNALVLSTGNKSESAT 408 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDM G F+ + D+ KT V++LA WRNS T IP I+E++PSAEL Sbjct: 409 GYCTLYGDMVGAFSVISDVPKTLVYRLAMWRNSQSST---------IPQRIIERAPSAEL 459 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLYGSEYKRRQ 531 P Q DQ+SLPPY +LD II +V N++S + + E + LL SE+KRRQ Sbjct: 460 APGQVDQDSLPPYDVLDQIIDGLVLNDKSSSELKITTSLSPEEIDKTSKLLKISEFKRRQ 519 Query: 532 APVGTKITAKSFGRDRLYPISNKFR 556 A +G KI+ +SF P+++K++ Sbjct: 520 AALGPKISKRSFFSGWNVPVTHKYK 544 >gi|297564424|ref|YP_003683397.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848873|gb|ADH70891.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 583 Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 193/598 (32%), Positives = 289/598 (48%), Gaps = 61/598 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL+IA+AQ NP VGD+ GN +A+ G L++F E+ ++GY EDL + Sbjct: 1 MVKLRIALAQTNPTVGDLEGNCDSVVAYARQASDAGAHLVVFPEMVVTGYSVEDLALRDG 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PR--QDQEGVLNSVVILDAGNI 108 F+ A + A L G G +VVGF PR Q NS+ +L G I Sbjct: 61 FVSASTKATHNLADRLAAEGLGHLPVVVGFLNRREGPGPRFGQPSGAPQNSLAVLHRGRI 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 V K +LPNY F E R F+ G + + + + ICED+W++ G Sbjct: 121 RLVSAKHHLPNYGVFDEFRYFVPGDTLPVLRLHGVDVAFAICEDLWQDGGPVTAAADAGV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +LN SPY +K R + + + I YVN GGQD+L+F+G S D Sbjct: 181 GMLVTLNGSPYERHKDDVRLALCQRRAREIGAAIGYVNMTGGQDDLVFEGDSLVVDADGD 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD------------------SASTMYIPLQ 270 L + F E +T+ S D + S + P + Sbjct: 241 LVSRAPQFEEALLVTDLSLPPAESPEEPARADGFRVVRYAVTDRPSPPPGTRSPVLTPRR 300 Query: 271 EEEAD----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 + +D Y A V +RD+V+KN F V++ +SGG DSAL A IA DA+G ENV +++ Sbjct: 301 DPMSDLGEVYTALVTGVRDHVRKNGFTSVLVSVSGGADSALTATIAADAVGAENVHALVM 360 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P + ++ +LEDA A K G V P VNH + + G N+ ++ Sbjct: 361 PARDSTAAALEDADALIKRQGLTNRVYP----VNHLLDALESTIAAADEGGT-RNLLAQA 415 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMALS ++L T +KSE++ G T +GD G + PLKD +KT V++LA WRN+ Sbjct: 416 RGALLMALSREEGHLVLATGDKSELATGLCTHHGDAVGAYAPLKDCWKTLVWELARWRNT 475 Query: 447 HGITSGLGPLTEVIPPSILEKSP-SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 +G P IP L ++P S P + P Y +LD ++ +++I Sbjct: 476 EDARAGRTP---PIPERSLGRNPVSGWGAPGSVPAQ--PEYGVLDGLL-------DAYIG 523 Query: 506 NDQ--------EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 DQ ++ + VR+V L+ +E+KRRQ P G KIT ++ GRDR PI++++ Sbjct: 524 TDQGIAAMTAAGFDPDLVRHVVRLVDRAEHKRRQYPPGPKITKRNLGRDRRLPITSRW 581 >gi|148254909|ref|YP_001239494.1| NH(3)-dependent NAD(+) synthetase [Bradyrhizobium sp. BTAi1] gi|146407082|gb|ABQ35588.1| NH(3)-dependent NAD(+) synthetase [Bradyrhizobium sp. BTAi1] Length = 459 Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 167/467 (35%), Positives = 256/467 (54%), Gaps = 21/467 (4%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +I +AQLNP VGD+AGN A+AR AR +A G DL+ ELF++GYPP DLV + +F Sbjct: 7 RITLAQLNPTVGDVAGNAARAREARAKAAADGADLVALPELFMAGYPPTDLVREPAFQST 66 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +AI+TL +T DGG +++G P + + + N+ +LD G I A+R K NLP+ + Sbjct: 67 CRAAIETLAGETADGGPAVLIGTPWAEDDRLFNACALLDGGRIAALRFKANLPDG---DQ 123 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASPYY 180 +R F G + P+ R +R+G+ I EDI + ++ + L + GAE + + S Y Sbjct: 124 RRLFARGPAAGPVSVRGVRIGVAIGEDIRVEASSDDESVVETLAETGAEIIVVPSGSAYV 183 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +R ++ LP++++NQVGGQD ++FDGASF + +A Q+ F+ + Sbjct: 184 RGGGDRRLSAAVAVVTGSDLPLVWLNQVGGQDGVVFDGASFALNADLSVATQLSGFAAEV 243 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 W + W+ + + +EADY ACVL LRD+ KN F V++ L+ Sbjct: 244 VTLTWS--RGADGWH-----GHGPVANAIDGDEADYAACVLGLRDHALKNGFSGVLLDLA 296 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGI + L A IAVDALG + V+ ++LP + T+P + +DA A A LG D+ PI V Sbjct: 297 GGISTVLSAEIAVDALGPDKVRGVLLPGRDTAPGANDDAKALAARLGITLDIWPIEAAVE 356 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + L V +++ + IRG +L AL+ S +++ SN S++ G GT + Sbjct: 357 GFEKILPRPLATG----VQDDLLAHIRGTMLRALARTSGLLVVAASNTSDLP-GRGTRHA 411 Query: 421 -DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 D+S GF PL D+ QV +LA+ R G E P E Sbjct: 412 DDVSCGFAPLADISTMQVMRLAALRGRWTPGDARGRAVEATAPDACE 458 >gi|295698538|ref|YP_003603193.1| NAD+ synthetase [Candidatus Riesia pediculicola USDA] gi|291157327|gb|ADD79772.1| NAD+ synthetase [Candidatus Riesia pediculicola USDA] Length = 544 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 180/571 (31%), Positives = 303/571 (53%), Gaps = 54/571 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K+K+ + Q+N +GDI N K +R E+ ++ ++I+F EL + G+ P+ L + Sbjct: 1 MKNKIKVVLVQMNSKLGDIKQNFDKIKRQIEKFKKKKPNIIVFPELSLIGFCPDLLNYHP 60 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIA--VRD--- 113 F + C + + + +VVG + + N + + ++ ++D Sbjct: 61 YPDFYKTCCFYMSKI-CKLSNKDTIVVVGHFFKVRNKFYNVLSCFQSKKLLTRFLKDDFQ 119 Query: 114 ----KINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K N+ ++ + +E I+GY R+ LI EDI+ I KK+ + Sbjct: 120 SNNSKKNINHFYKRYESILIINGY----------RISFLIGEDIFSREKIYNE-KKKKID 168 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 LF + + PY K + + + + + I+Y+N VGGQDELIF+G S FD + Sbjct: 169 LLFLICSFPYSFRKNRVSDNFLKKMSTEMKIRIVYLNSVGGQDELIFEGNSRYFDQVGRS 228 Query: 230 AFQMKHFSEQN-FMT----EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 + +F E++ F T + +Q S + Y+A VLS R Sbjct: 229 FCLIPYFLEKSCFFTIDRNSISFKEQFSHHR--------------SKISRLYDALVLSTR 274 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DYV KN+F ++IGLSGGIDSAL +IA+DA+GKE+V+ IM+P TS +S+EDA + Sbjct: 275 DYVNKNHFLGIVIGLSGGIDSALSLSIAIDAIGKESVKAIMMPSINTSQESIEDAKKQCE 334 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 +G +V+ I + F + + + +V EN+Q+R R LM +SN ++ +LL+ Sbjct: 335 LVGTTLEVISIQKIFGQFSCQLKKMFKSLKC-VVLENLQARCRAVFLMGISNQNRYLLLS 393 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSN+SE+ GY T+YGDMSGGF PLKD+ KT VF L+ +RN+ + +VIP +I Sbjct: 394 TSNRSELYTGYTTIYGDMSGGFAPLKDIPKTIVFSLSKYRNT---------INKVIPENI 444 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLL 522 + K P++ELR D++ LP Y +LD+I+ ++ + S I + +E++ V L Sbjct: 445 ILKKPTSELRKKGFDEDDLPKYSLLDEILFYYIDKKYSIQKILSKIPLKNESILEVIKLF 504 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + +E+KR+Q+P+G + + ++ YP+++ Sbjct: 505 HSNEFKRKQSPIGPILFSNKTTFEKTYPVNH 535 >gi|90417922|ref|ZP_01225834.1| possible NAD(+) synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90337594|gb|EAS51245.1| possible NAD(+) synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 538 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 153/452 (33%), Positives = 251/452 (55%), Gaps = 13/452 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L++AIAQ+ + GD+AGN+AKAR AR+EA G L++F F++G P D +F+ Sbjct: 10 RLRLAIAQIAAIPGDLAGNLAKARAARDEAAGAGAQLVVFPAGFLAGSPHPDSPLAAAFV 69 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC A+D L +DT GG G+V+G PR+ +GV +SV +LDAG I+ RD+++LP+ F Sbjct: 70 SACMDAVDQLANDTGYGGPGLVIGSPRRSDDGVHDSVAVLDAGRILTWRDRVDLPHARSF 129 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E + +G P+ FR +RLGI I +D+ + ++C+ L + GAE L + +A P+ + Sbjct: 130 EEPPAYRAGPMPGPVAFRGLRLGIPIGDDLRGDLDVCETLAESGAELLLAPSAMPFRRDG 189 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 + +RH+ V Q+ LP+++VN VGGQ + DG +F F + LA Q F F++ Sbjct: 190 IDRRHQAVLRQVIETDLPMVFVNGVGGQGVGVMDGGAFAFQADRTLALQSPQFGAGLFLS 249 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +W + S W + D + +P EEA + ACV ++R + + V + L G Sbjct: 250 DWQ--RTASGWRCETRD---VVDLP-GPEEAIWRACVCAIRAHAEAQGTETVALALHGDA 303 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 D+A+ AA+AVDA+G V+ ++ P + A LG VLP+ + Sbjct: 304 DTAIVAAMAVDAMGPSLVKGLLTPDADRDTADTDAVRTGAAQLGIACHVLPLTPV----- 358 Query: 364 SLMSQFLQEEPSGIVAEN-IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 L + ++ S + A ++++RG +L+AL+ + A LL +N++ + +G G G + Sbjct: 359 -LAAMTADDDVSDVPASRAARAQMRGALLVALAERTGAALLGATNRTALRLGNGEADGVL 417 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + G NP+ DL ++ + LA WR H LG Sbjct: 418 AAGLNPIADLSRSDLADLARWRRGHRPADSLG 449 >gi|269958931|ref|YP_003328720.1| NAD+ synthetase [Anaplasma centrale str. Israel] gi|269848762|gb|ACZ49406.1| NAD+ synthetase [Anaplasma centrale str. Israel] Length = 506 Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 186/538 (34%), Positives = 269/538 (50%), Gaps = 41/538 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 + IAQLN D+ GN K E+A G ++L + ISGY + + F Sbjct: 4 VFIAQLNYNARDMRGNFEKILAGYEKAVSSGARIMLLSRCAISGYLDKAPLPFGEFTALY 63 Query: 67 SSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 ++ L S T + IVVG R+D + L V+ L +G I R +++P Sbjct: 64 RKYLENLASHTLNKQTCIVVGGVERRDAQ--LCEVIYLLSGGTI--RTLMHIPKRLRDAF 119 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-YHNKL 184 +SG + L+ E+ + + G + L + S + + N L Sbjct: 120 VMFSVSGLT-----------AALLLEESPDVEHGGASIPSNGLDLLILMGKSTHGWPNAL 168 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++ +G+ + YVN +GG + +F G S + + + Sbjct: 169 SSCVKL-SGKCGAT---LAYVNLLGGYEHRVFPGGSLLCNNDKA-----------HLCAL 213 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W DQ + D P EE DY +L+LRDY KN F V++G+SGGID Sbjct: 214 WSEDQSIMNPCATLDSVGE----PPTSEEQDYQNLMLALRDYTHKNGFASVVLGMSGGID 269 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A IA DALG + V T MLP +YT+P S+EDAA CA LG + V+ I ++ Sbjct: 270 SALVATIATDALGPQYVHTFMLPTRYTTPSSVEDAAKCALNLGTSHTVMSIEEIYRTTLG 329 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S SG+ EN+QSRIRG LMA SN +LL T NKSE+ GY TLYGDM G Sbjct: 330 ALSTLPANSLSGVAEENMQSRIRGMSLMAASNKMGWLLLATGNKSELLTGYTTLYGDMCG 389 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF P+KD+YKT+V++LA WRN+ L T VIP I+ K+PSAELRP Q DQ++LP Sbjct: 390 GFAPIKDVYKTRVYELAKWRNNKIPRGSLCQKTNVIPEEIIRKAPSAELRPDQKDQDTLP 449 Query: 485 PYPILDDIIKRIV---ENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 Y +LD ++ +V + +E + + ++ E V V +L+ S +K +QAP G I+ Sbjct: 450 EYSVLDRVLHALVDLGQTQEEIVRSG--FSGELVETVMNLVQKSSFKLQQAPCGPIIS 505 >gi|56416653|ref|YP_153727.1| NH3-dependent NAD+ synthetase protein [Anaplasma marginale str. St. Maries] gi|56387885|gb|AAV86472.1| NH3-dependent NAD+ synthetase protein [Anaplasma marginale str. St. Maries] Length = 506 Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 181/537 (33%), Positives = 265/537 (49%), Gaps = 39/537 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 + IAQLN D+ GN K E+A G ++L + ISGY + + F Sbjct: 4 VFIAQLNYNARDVRGNFEKILAGYEKAVSSGARIMLLSRCAISGYLDKAPLPFGEFTALY 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 ++ L S T + IVVG + + + +L G I R +++P Sbjct: 64 RKYLENLASHTLNKQTCIVVGCVERRDAQLCEVIYLLSGGTI---RTLMHVPKRLRDAFV 120 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-YHNKLK 185 +SG + L+ E+ + + G + L + S + + N L Sbjct: 121 MFSVSGLT-----------AALLLEESPDVEHGGASIPSNGLDLLILMGKSTHGWPNALS 169 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW 245 + +G+ + YVN +GG + +F G S + + + W Sbjct: 170 SCVRL-SGKCGAT---LAYVNLLGGYEHRVFPGGSLLCNNDKA-----------HLCALW 214 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 DQ + D P EE DY +L+LRDY KN F V++G+SGGIDS Sbjct: 215 SEDQSIMNPCATLDSVGE----PPTSEEQDYQNLMLALRDYTHKNGFASVVLGMSGGIDS 270 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 AL A IA DALG + V T MLP +YT+P S+EDAA CA LG + V+ I ++ Sbjct: 271 ALVATIATDALGPQCVHTFMLPTRYTTPSSVEDAAKCALNLGTSHTVMSIEEIYRTTLGA 330 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 +S SG+ EN+QSRIRG LMA SN +LL T NKSE+ GY TLYGDM GG Sbjct: 331 LSTLPANSLSGVAEENMQSRIRGISLMAASNKMGWLLLATGNKSELLTGYATLYGDMCGG 390 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 F P+KD+YKT+V++LA WRN++ L T VIP I+ K+PSAELRP Q DQ++LP Sbjct: 391 FAPIKDVYKTRVYELARWRNNNMPQGSLCQKTNVIPEEIIRKAPSAELRPDQKDQDTLPE 450 Query: 486 YPILDDIIKRIV---ENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 Y +LD ++ +V + +E + + ++ + V V +L+ S +K +QAP G I+ Sbjct: 451 YSVLDRVLHALVDLGQTQEEIVRSG--FSRDLVETVMNLVQKSSFKLQQAPCGPIIS 505 >gi|222475017|ref|YP_002563432.1| NH3-dependent NAD+ synthetase protein (nadE) [Anaplasma marginale str. Florida] gi|255004123|ref|ZP_05278924.1| NH3-dependent NAD+ synthetase protein (nadE) [Anaplasma marginale str. Virginia] gi|222419153|gb|ACM49176.1| NH3-dependent NAD+ synthetase protein (nadE) [Anaplasma marginale str. Florida] Length = 506 Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 186/538 (34%), Positives = 268/538 (49%), Gaps = 41/538 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 + IAQLN D+ GN K E+A G ++L + ISGY + + F Sbjct: 4 VFIAQLNYNARDVRGNFEKILAGYEKAVSSGARIMLLSRCAISGYLDKAPLPFGEFTALY 63 Query: 67 SSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 ++ L S T + IVVG R+D + L V+ L +G I R +++P Sbjct: 64 RKYLENLASHTLNKQTCIVVGGVERRDAQ--LCEVIYLLSGGTI--RTLMHIPKRLRDAF 119 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-YHNKL 184 +SG + L+ E+ + + G + L + S + + N L Sbjct: 120 VMFSVSGLT-----------AALLLEESPDVEHGGASIPSNGLDLLILMGKSTHGWPNAL 168 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + +G+ + YVN +GG + +F G S + + + Sbjct: 169 SSCVRL-SGKCGAT---LAYVNLLGGYEHRVFPGGSLLCNNDKA-----------HLCAL 213 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W DQ + D P EE DY +L+LRDY KN F V++G+SGGID Sbjct: 214 WSEDQSIMNPCATLDSVGE----PPTSEEQDYQNLMLALRDYTHKNGFASVVLGMSGGID 269 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A IA DALG + V T MLP +YT+P S+EDAA CA LG + V+ I ++ Sbjct: 270 SALVATIATDALGPQCVHTFMLPTRYTTPSSVEDAAKCALNLGTSHTVMSIEEIYRTTLG 329 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S SG+ EN+QSRIRG LMA SN +LL T NKSE+ GY TLYGDM G Sbjct: 330 ALSTLPANSLSGVAEENMQSRIRGISLMAASNKMGWLLLATGNKSELLTGYTTLYGDMCG 389 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF P+KD+YKT+V++LA WRN+ L T VIP I+ K+PSAELRP Q DQ++LP Sbjct: 390 GFAPIKDVYKTRVYELAKWRNNKIPRGSLCQKTNVIPEEIIRKAPSAELRPDQKDQDTLP 449 Query: 485 PYPILDDIIKRIV---ENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 Y +LD ++ +V + +E + + ++ E V V +L+ S +K +QAP G I+ Sbjct: 450 EYSVLDRVLHALVDLGQTQEEIVRSG--FSGELVETVMNLVQKSSFKLQQAPCGPIIS 505 >gi|167751854|ref|ZP_02423981.1| hypothetical protein ALIPUT_00096 [Alistipes putredinis DSM 17216] gi|167660095|gb|EDS04225.1| hypothetical protein ALIPUT_00096 [Alistipes putredinis DSM 17216] Length = 527 Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 184/563 (32%), Positives = 299/563 (53%), Gaps = 50/563 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN VGD+AGN K + A +G DL++F E ISG P DL+ K F++ Sbjct: 1 MKIALAQLNYTVGDVAGNTNKIIESVRRAKAEGADLVVFAEQAISGAPSFDLLRKNPFLE 60 Query: 65 ACSSAIDTLKS--DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 C A+ + + DT D +VG P +EG +++ ++ G ++ K N+ E Sbjct: 61 QCEDALMRIAAECDTVDA----IVGLPILTKEGTISAAALIQQGRVVRYVGKQNITVRRE 116 Query: 123 FHEKRTFIS-GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F++ + + R R +++ +D++ + K + E + +++A Y Sbjct: 117 LG----FLTPSKGCEYVTIRGCRCALVVGDDLFHTPDFDKSV-----ETVINIHARRYRK 167 Query: 182 NKLKKRHEIVTGQISHVHLP-IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE-- 238 L +R++++ I++V ++ VNQVGG EL++DG S D + +L +K F E Sbjct: 168 GDLSRRYDVIR-NIAYVKGKNVVMVNQVGGATELVYDGMSGVMDNRGKLVRLLKSFEEDF 226 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD---YNACVLSLRDYVQKNNFHKV 295 Q F TE + + S +P+ + Y A LRD+ KN + K Sbjct: 227 QVFDTE--------------NPACSVESVPVSVNDRTRFIYEAACCGLRDFFVKNGYKKA 272 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +G+SGGIDSA+ A +AV ALG ENV+ +M+P +++S S+EDA A+ LG ++ V+PI Sbjct: 273 CVGVSGGIDSAVVACLAVAALGAENVRGLMMPSQFSSEGSVEDAKQLAENLGIEFHVVPI 332 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + + ENIQSRIR +LMAL N + +LL SNKSE ++G Sbjct: 333 TEAYRSIVDTLIPVIGGTDFDATEENIQSRIRTLMLMALQNKNGYVLLNCSNKSENALGI 392 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGD G F+ DLYKT+++ LA + N IP +IL K PS+ELRP Sbjct: 393 CTLYGDTGGAFSVTGDLYKTEMYDLARYINRK--------FGAPIPENILTKEPSSELRP 444 Query: 476 HQTDQESLPPYPILDDIIKRIVEN---EESFINNDQEYNDETVRYVEHLLYGSEYKRRQA 532 +Q D + LP Y ++D I+ R++E+ E IN ++ + V+ + ++ +E KR Q Sbjct: 445 NQKDSDMLPSYEVVDAILYRLIEDGQSREEIIN--AGFDSDEVQKIYAMVMRNEKKRFQY 502 Query: 533 PVGTKITAKSFGRDRLYPISNKF 555 P ++++ SFG + P+++K+ Sbjct: 503 PPVLRLSSSSFGHEYRMPLTHKY 525 >gi|256752431|ref|ZP_05493290.1| NAD+ synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256748700|gb|EEU61745.1| NAD+ synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 333 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 149/353 (42%), Positives = 211/353 (59%), Gaps = 22/353 (6%) Query: 205 VNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST 264 +NQVG DELIFDGASF + + + Q+K F E + + + L + + +D + Sbjct: 1 MNQVGANDELIFDGASFVVNEEGKRVVQLKAFEEDIKVFDIDELKNLRKLPEIKEDISWV 60 Query: 265 MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 YNA VL +RDY +K+ F K ++GLSGGIDSA+ AIAV+ALGKENV + Sbjct: 61 -----------YNALVLGVRDYCKKSGFKKAVVGLSGGIDSAVVCAIAVEALGKENVLAV 109 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 +P +Y+S S DA A LG ++ V+PI + + S+ + + ENIQ+ Sbjct: 110 SMPSRYSSEGSKSDARILADNLGIEFRVIPIEPVFKSYLSVFNGD-NNVIGDLAEENIQA 168 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 RIRGN L +SN ++LTT NKSE+++GY TLYGDMSG P+ D+ KT V+ LA + Sbjct: 169 RIRGNYLTFISNREGHIVLTTGNKSELAMGYCTLYGDMSGSLAPIADVPKTMVYDLARFI 228 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFI 504 N E+IP SI+EK+PSAELRP+Q D++SLPPY ILD+I+K +E S Sbjct: 229 NRE---------REIIPISIIEKAPSAELRPNQKDEDSLPPYKILDEILKMYIEENRSAK 279 Query: 505 N-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ Y++ V+ V + + EYKR+QA G KIT K+FG R PI + F+ Sbjct: 280 EIIEKGYDERLVKDVINKVNRVEYKRKQAAPGLKITTKAFGTGRRMPIVHNFK 332 >gi|218509453|ref|ZP_03507331.1| NAD synthetase [Rhizobium etli Brasil 5] Length = 217 Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 117/207 (56%), Positives = 148/207 (71%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+ GN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVTGNLAKAREARVDAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQD+ G NSV +LD G +IAVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTVDGGPGVIIGFPRQDENGRYNSVAVLDGGKVIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI ICEDIW +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFHQGAMPGPVNFRGVRLGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQ 211 RH +V Q+ LP+IY Q+GGQ Sbjct: 191 DIRHHVVLKQVIETGLPLIYAAQLGGQ 217 >gi|301166608|emb|CBW26184.1| NH(3)-dependent NAD(+) synthetase [Bacteriovorax marinus SJ] Length = 578 Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 189/590 (32%), Positives = 293/590 (49%), Gaps = 53/590 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I I Q + +GD + G +L +F ELF++GYP +DL ++SFI+ Sbjct: 1 MQINIQQTHHTIGDFDAIFTYIENLLRDNQGSG-ELFIFPELFLTGYPLQDLCLQRSFIE 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP--RQDQEGVLNSV--VILDAGN--IIAVRDKINLP 118 + ++ L + +++G D EG+ + VI + G + + K LP Sbjct: 60 RYNDFLEKLNALQDKLNPTLLLGGLDYEMDSEGLPLRIRNVIFEFGPKPLEPIYTKKLLP 119 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF-------- 170 NY F E++ F +G + FRD + G+LICED+W +S K+ E Sbjct: 120 NYDIFDEQKYFSAGSESCIYQFRDKKFGLLICEDMWMSSMHSTDPVKELYELTENEDITL 179 Query: 171 --LFSLNASPYYHNKLKKRHEIVTGQISHVHL-PIIYVNQVGGQDELIFDGASFCFDGQQ 227 + +L+ASP+Y K K R I +IS + P Y N+VGG+DE++FDG+SF +G Sbjct: 180 DGVINLSASPFYLGKDKTRL-IRASEISTLFCCPFFYTNRVGGEDEILFDGSSFVVNGSS 238 Query: 228 Q-----------LAFQMKHFSE--------QNFMTEWHYDQQLSQWNYMSDDSASTMYIP 268 L +M FS + + W + L + N ++ Sbjct: 239 VTHRAKFYQPDILKIEMSKFSPVEKSLRALSDRVNSW---ESLFKANITKNEQGQYRIPE 295 Query: 269 LQEEEAD--YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-ENVQTIM 325 L +++ + + +++Y +K+ F + LSGGIDSAL A+ +L + +N++ I Sbjct: 296 LSDQDCEEILQSLRFGIQEYARKSGFKNFDVALSGGIDSALVLAVMKLSLEEDQNLEAIF 355 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P +++ S + + K +G K PI + + ++ G+ ENIQSR Sbjct: 356 MPGFFSATMSYDLSFEMCKKIGVKLTTFPIKFAHSSLRTQYQDVFKDPMEGLCDENIQSR 415 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +RG IL A SN +M+L TSNKSE+SVGY TLYGD G +PL DLYK++VF L+ + N Sbjct: 416 LRGAILYARSNQRNSMVLNTSNKSELSVGYSTLYGDSVGAISPLGDLYKSEVFALSRYIN 475 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 E+IP I+++ PSAELR Q D +SLP YP+LD I++ I+ S N Sbjct: 476 KQ--------YGEIIPVGIIDRPPSAELREDQEDSQSLPEYPVLDTILEGILSYRLSTKN 527 Query: 506 -NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 + + + V V L SEYKR+Q KI AKSFG PI K Sbjct: 528 LIEMGLDADEVSKVFKLYTRSEYKRKQFCPIIKIKAKSFGTGYRIPICKK 577 >gi|94986688|ref|YP_594621.1| NH(3)-dependent NAD(+) synthetase [Lawsonia intracellularis PHE/MN1-00] gi|94730937|emb|CAJ54300.1| NH(3)-dependent NAD(+) synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 525 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 170/540 (31%), Positives = 274/540 (50%), Gaps = 42/540 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA+ QL+ + GDI N + +A + G + + EL + G+P DL + I C Sbjct: 5 IALLQLHTITGDIIANTQNILQQVSKAKKDGATVCITPELSLCGHP--DLHEIPTIISTC 62 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH-- 124 +++ + + +GG I+VG + N+ ++ G I + K +++F+ Sbjct: 63 INSLQQIAKEC-NGGPSIIVGSIETTPTNIYNTTFLIQNGQIHTLCKK----PFTQFYPS 117 Query: 125 ---EKRTFISGYSNDPIVFRDIRLGILICEDIWKN--SNICKHLKKQG-----AEFLFSL 174 E+ I+ +N+ F I + + +K + +C + Q E + Sbjct: 118 IKKEEYILINNNNNNGFCFTSINKQLFLIVTGYKTLINYVCNKIIYQNEQLKKVEAILCP 177 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 ++ P+ +++ +T ++ P+ + NQ G IF G S C + Q+ Q Sbjct: 178 SSEPFIASQIPHFFYELTSISDQLNKPLYFCNQAGEDKNYIFLGGSQCINSQETKNNQSL 237 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E + + H L ++ S+ + + A + ++ YV+KN F Sbjct: 238 LFQENYIVVKNHSSVSLKDMSFNSN-------------KLLWEALIHGIQQYVKKNGFSD 284 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++GLSGGIDS++ AA+AV+ALG+ V I++P ++S S+ DA A L K +LP Sbjct: 285 VVLGLSGGIDSSIVAALAVEALGEHRVHGILMPSPWSSEGSITDAELLANNLDVKTYLLP 344 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 IH L++ F +S+ P + ENIQSRIRG +LMA+SN M+L+T NKSE +VG Sbjct: 345 IHTLIDSFTHSLSELFIGYPPDVTEENIQSRIRGVLLMAISNKFGWMVLSTGNKSERAVG 404 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGD GG P+ DLYKT+V+ LA W N ++IP S+L K PSAELR Sbjct: 405 YCTLYGDTCGGLAPIGDLYKTEVYHLAQWYNQ-------SKQKDIIPTSVLTKPPSAELR 457 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAP 533 P Q DQ+SLPPY LD I++ ++ + N DQE N+ + ++ L+ + +KR Q P Sbjct: 458 PGQLDQDSLPPYKELDFILQMLLSKNPT--NIDQELLNNPKLNDIKRLIQKNAFKRMQGP 515 >gi|146341601|ref|YP_001206649.1| putative glutamine-dependent NAD(+) synthetase (NadE-like) [Bradyrhizobium sp. ORS278] gi|146194407|emb|CAL78432.1| putative glutamine-dependent NAD(+) synthetase (NadE-like) [Bradyrhizobium sp. ORS278] Length = 442 Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 154/472 (32%), Positives = 237/472 (50%), Gaps = 50/472 (10%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISG---YPPEDLVFKKSF 62 KI +AQLNP GDIAGN AK R AR +A G DL++ ELF+SG Y E L Sbjct: 7 KITLAQLNPTAGDIAGNAAKVREARAKAATDGADLVVLPELFLSGGLAYDVEPL------ 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 C +AI+ L +T D G +++G P D + +++ +LDAG I A R KINL ++ Sbjct: 61 ---CRAAIEALAHETADSGPAVLIGTPWADDGKLHDAMALLDAGRIAATRFKINL---AD 114 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----NICKHLKKQGAEFLFSLNASP 178 H++R F G + P+ R +R+GI I EDIW + N+ + L + GAE + A+ Sbjct: 115 GHQQRLFTRGPAAGPVSVRGVRIGIAIGEDIWPEALGGENVVETLAETGAELILVAAAAR 174 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y + +R +++ LP+I++N GGQ + +FDGASF + +A Q+ F + Sbjct: 175 YVLGEGDRRLSAAVARVTESDLPLIWLNLTGGQGDDVFDGASFALNADLSMAVQLPAFVD 234 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE-EEADYNACVLSLRDYVQKNNFHKVII 297 W W S PL + EEADY A VL LRD V K V++ Sbjct: 235 DVSTLAWRRGND--GWQCRGPVS------PLIDGEEADYAARVLGLRDRVAKGGLTGVVL 286 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 L+ +++AL AIAVDALG V+ +ML T Q+ ++A A A LG +V+PI Sbjct: 287 ELTADVEAALSLAIAVDALGPAQVRAVMLSGPDT--QAPDEAIAAATRLGVAAEVVPIAA 344 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 V F ++++ L +++ + +R +L A+++ S A+ Sbjct: 345 AVAGFENILAGPLSHSAH----DDLLTSVRATLLKAMASLSGALACRP------------ 388 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 + G D+ ++ +LA+ RN LG EVIPP +++++P Sbjct: 389 ----LQGSGRQTCDVTSGELIRLAALRNRWKPVGALGASGEVIPPDLIDRAP 436 >gi|126640909|ref|YP_001083893.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Acinetobacter baumannii ATCC 17978] gi|126386793|gb|ABO11291.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Acinetobacter baumannii ATCC 17978] Length = 364 Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 141/357 (39%), Positives = 202/357 (56%), Gaps = 16/357 (4%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 +A +Q DLI+F EL + GYP EDL+ + + + A L S+ D +V GF Q Sbjct: 7 QAKKQDADLIIFPELSVIGYPAEDLLLRPNLNKRMQKAFAQL-SEVKD--IVMVFGFVNQ 63 Query: 92 DQEGV-LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILIC 150 ++G NS ++ G ++ V +K NLPNY F EKR F G+ + + + G+LIC Sbjct: 64 TEDGQRYNSAAVMKDGQVLGVFNKHNLPNYGVFDEKRYFQKGHQHLVFEYLGHKFGVLIC 123 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG 210 EDIW + N K L + + + LN+SPY K + R + ++ +HL I+YVNQVGG Sbjct: 124 EDIW-SINTVKQLSQLNVDTVLVLNSSPYEVGKPQHRKQTLSELAKQLHLNIVYVNQVGG 182 Query: 211 QDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ 270 QD+LIFDG SF + ++A Q F E ++ E+ D +L Y +SA P Sbjct: 183 QDDLIFDGTSFVSNQNGEIALQAPSFKEDLYIAEFDRDTKL----YKVVESA-----PAL 233 Query: 271 EEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 E A+ Y V++ RDYV+++ F VI+GLSGGIDSAL AIAVDA+G E VQ +M+PY Sbjct: 234 ETFAEIYQGLVMATRDYVERSGFPGVILGLSGGIDSALTLAIAVDAIGAERVQAVMMPYT 293 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 YTS S+EDAA A+ +G + + IH +VN F + F P+ E I R+ Sbjct: 294 YTSQISVEDAAEQARRMGVTFGIAEIHSIVNSFMQTLYPFFGNSPAD-ATEEIYKRV 349 >gi|288959136|ref|YP_003449477.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] gi|288911444|dbj|BAI72933.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] Length = 555 Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 181/569 (31%), Positives = 283/569 (49%), Gaps = 24/569 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L IA+AQ NP+ GD N + R R EA +G DL+L +SG P DL Sbjct: 1 MTDRLSIALAQFNPLAGDPVANADRIRAIRAEAAARGADLLLCPAGAVSGSPLSDLAAFP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL-PN 119 +F+ A A+ L DT DGG ++VG P +D N+ ++LD G I A R + + + Sbjct: 61 AFLDAVERAVRGLADDTGDGGPALLVGAPWRDGPRRHNAALLLDDGKISAARFQCVMESD 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + E+ F G P+ R +R+G+LI D+ ++ + L + GAE L + ASP+ Sbjct: 121 EAGAAEEDCFDPGPMPGPVNVRGVRVGLLIGGDL-VTGDVAETLVESGAELLVGMLASPF 179 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 ++ R + ++ LP++ VN VGGQ+E +FDG SF +L Q F+E Sbjct: 180 APGRVDARIQAGVARVVDCGLPLVAVNLVGGQEERVFDGGSFALASGGRLVAQAPLFAEH 239 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 +T W W D + M P + EA Y A +L L D V K V++GL Sbjct: 240 LLLTRWERGAD-DGW----DGDEAEMIAPAEGVEALYCALLLGLHDAVTKGGVPGVVVGL 294 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTS--------PQSLEDAAACAKALGCKYD 351 +GG+DSAL AAIAVDALG E V + P SLEDAA + LGC+ D Sbjct: 295 TGGLDSALVAAIAVDALGPERVLAVRAPLPAGEADLLADNLADSLEDAAEIVELLGCRLD 354 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + + ++ SL++ S ++ +R+R L AL++ A+LL++ ++++ Sbjct: 355 NVVLAPVLKAADSLLAPAFAGRESTVLVNQFHARLRAATLAALADRMGALLLSSVDRTDR 414 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +G GT + G+ L D+ KT V LA WRN++ GP ++P +L + A Sbjct: 415 LLGLGT--EEAGCGYAVLADVPKTAVLDLARWRNANQPAGSRGPAGLLVPERVLARRLKA 472 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRR 530 E LPP LDD++ ++++ S + + + E+V V L+ +E RR Sbjct: 473 E------TPAGLPPVEALDDLLAGMLDSGLSVADLAGRGHAAESVATVWRLVVQAEAGRR 526 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +AP G +I+ + R R +PI+ D + Sbjct: 527 KAPPGPRISRPTAARLRRFPITGGLADLV 555 >gi|224531610|ref|ZP_03672242.1| NAD+ synthetase [Borrelia valaisiana VS116] gi|224511075|gb|EEF81481.1| NAD+ synthetase [Borrelia valaisiana VS116] Length = 512 Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 172/551 (31%), Positives = 279/551 (50%), Gaps = 44/551 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ V D+ I + +EA +G D+++F +F+ +L + + Q Sbjct: 1 MKISIAQTKYSVLDLDKCIVDFKINYDEALLKGSDVLVFPSMFLGSTKYAELFDRLKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K +D +V G + ++ + ++ +I + NLP + + Sbjct: 61 DICKFIEIMKEQVNDSTL-VVFGHSVYESGKFVDIISVISNHEVILTVSQYNLPEFF-IY 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 + F D ++F ++ + ++LKK A++L + S + K Sbjct: 119 KNNVFAVLNFEDALLFEEL------------SPQFGENLKK--AQYLIVPSKSYFTREKN 164 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R + +L ++Y N G +D ++DG SF + ++ Q K F E +F++ Sbjct: 165 SLRLKFFERVAVENNLDVVYSNFYGVEDSAVYDGCSFFINSLGKIK-QAKGF-EFDFISN 222 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + D+ + ++ E A L LR+Y+ + F KV +GLSGGID Sbjct: 223 DAFQD-------LKFDTCNGLF------EKIILAISLVLREYIYFSGFSKVHLGLSGGID 269 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A +A ALG ENV I +P K++S S+ DA +K LG K +PI DL F Sbjct: 270 SALVACLACFALGAENVVGISMPSKFSSVDSISDAKELSKKLGFKLIEMPIKDL----FE 325 Query: 365 LMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TLYGD Sbjct: 326 VSSRFFEGHFDVKGVTGENLQARLRGLLLMSYSNSKNSLLLNTGNKSEIAVGYCTLYGDT 385 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 GG + DL+KT+V+ LA + N+ G +IP +I+ K PSAEL+ Q D + Sbjct: 386 CGGLALIGDLFKTEVYDLAKYINAK-----FGEC--IIPVNIILKEPSAELKFDQKDSDY 438 Query: 483 LPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 LP Y +LDDI+ R + + ES + + TV V +L + +EYKRRQ K++ K+ Sbjct: 439 LPKYEVLDDILNRYLIDNESINSIYLHFEKGTVDKVLNLYFKNEYKRRQGAPIVKVSKKT 498 Query: 543 FGRDRLYPISN 553 FG + PI N Sbjct: 499 FGFELSIPILN 509 >gi|119953308|ref|YP_945517.1| glutamine-dependent NAD(+) synthetase [Borrelia turicatae 91E135] gi|119862079|gb|AAX17847.1| glutamine-dependent NAD(+) synthetase [Borrelia turicatae 91E135] Length = 522 Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 174/550 (31%), Positives = 266/550 (48%), Gaps = 44/550 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI IAQ V + ++ E A + +D+++F +F+ G E+L + +++ Sbjct: 7 VKICIAQTKCRVFKFKHILGVFKKNYEYALQNKVDILVFPFIFVGGIEYENLFHRAEYLK 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D +K D D +V G + +L+ V +++ + ++N P Sbjct: 67 KILDGLDFIK-DQVDDRLCVVFGHYSFYEGKLLDCVSVVNDHQFVLTTREVNKP------ 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILI--CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F+ Y I ++ +L ED + N + K A++L + S + Sbjct: 120 ----FLFNYKGQSIAVLNLDDDLLFQGLEDKF-NGSFSK------ADYLLVPSKSYFTGE 168 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L ++Y N G +FDG SF + ++ Q K F + Sbjct: 169 KNNLRLKFFKEVAMKNNLEVVYANLCGVYGSTVFDGLSFFINEYGKIK-QAKKFEDDILF 227 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E +D +L D S ++ L E A + SLR+YV + F KV +G+SGG Sbjct: 228 NEGFHDLEL--------DCESKIFDKLIE------ALISSLREYVDLSGFDKVHLGVSGG 273 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+ A IA ALG V I +P +++S S+ DA A+ LG K +PI + Sbjct: 274 IDSAVVAYIACAALGAHRVVGISMPSRFSSKGSVFDAKELARGLGFKLIDMPIEGMFQFV 333 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + + G+ EN+Q+R+RG LM+ SN +K++LL T NKSEI+VGY TLYGD Sbjct: 334 LEFFNGYFNTK--GVTEENLQARLRGLFLMSYSNANKSLLLNTGNKSEIAVGYCTLYGDS 391 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 GG + DL+K V+ LA + N L VI +IL K PSAELRP Q D +S Sbjct: 392 CGGIALIGDLFKRDVYNLAKYIN-------LREGRSVISVNILSKEPSAELRPDQKDSDS 444 Query: 483 LPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 LP Y ILD+I+ R + E + + E V V L SEYKRRQ + K++ K+ Sbjct: 445 LPKYEILDEILSRYLLENEPLELLYESFGKEVVAKVLDLYSSSEYKRRQGSMIVKVSRKA 504 Query: 543 FGRDRLYPIS 552 FG D L PIS Sbjct: 505 FGDDILLPIS 514 >gi|119026012|ref|YP_909857.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium adolescentis ATCC 15703] gi|118765596|dbj|BAF39775.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium adolescentis ATCC 15703] Length = 327 Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 137/308 (44%), Positives = 188/308 (61%), Gaps = 25/308 (8%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 P +EE Y ACVL L+DY+ KN+F V +GLSGGIDSAL AA+A DA+G ENV I +P Sbjct: 27 PDPDEEV-YTACVLGLKDYMAKNHFKGVCLGLSGGIDSALVAAMAADAVGGENVYGISMP 85 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 Y+S S +DAA A+ +G YD+ PI L F S +Q E G+ AEN+Q+RIR Sbjct: 86 SMYSSDGSKDDAADLARNIGAHYDIQPIEPL---FVSFQNQL---ELEGVAAENLQARIR 139 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS- 446 G I+MA SN + + T NKSE++ GY T+YGD GG+ P+KDL KT+V++++ WRN Sbjct: 140 GVIVMAYSNSKGLLAVATGNKSELACGYSTIYGDAVGGYAPIKDLLKTRVWEISRWRNKA 199 Query: 447 ----------------HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILD 490 G P +IP + +EK+PSAELRP Q D +SLP Y +LD Sbjct: 200 AAAGMGIGGLHVVGNEQGSAGTALPDGVMIPVNSIEKAPSAELRPGQKDSDSLPEYALLD 259 Query: 491 DIIKRIVENEESFINNDQEYNDE-TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 ++ +E+ + + DE TV V L+ +E+KRRQ P+G K+TA +FGRDR Sbjct: 260 QVLAMYIEHAHGRADLLADGFDEATVDTVMRLVDRAEWKRRQYPLGPKVTALAFGRDRRL 319 Query: 550 PISNKFRD 557 P++N FR+ Sbjct: 320 PVTNAFRE 327 >gi|167945297|ref|ZP_02532371.1| NAD(+) synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 254 Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 116/234 (49%), Positives = 154/234 (65%), Gaps = 9/234 (3%) Query: 269 LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 L EEEA Y A VL +RDYV KN F+ I+GLSGGIDSAL A+AVDALG V+ +M+P Sbjct: 18 LSEEEAVYGALVLGVRDYVCKNGFNGAILGLSGGIDSALTLAVAVDALGANQVEVVMMPS 77 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +YT+ S EDAA A+ LG ++ +PI F ++ P+ + ENIQ+R RG Sbjct: 78 RYTADMSNEDAAEQARILGVEHRTIPIEPAFKAFLGMLEPEFAGRPADVTEENIQARCRG 137 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 ILMA+SN +LLTT NKSE+SVGY TLYGDM+GGF P+KD+ K V++L +RN Sbjct: 138 VILMAISNKKGRILLTTGNKSEMSVGYATLYGDMAGGFAPIKDVPKLLVYRLCEYRNR-- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES 502 L+ VIP ++E+ PSAEL P Q D +SLP Y +LD +++R VE ++S Sbjct: 196 -------LSPVIPQRVIERPPSAELAPGQKDSDSLPDYAVLDPVLERYVEQDQS 242 >gi|203287963|ref|YP_002222978.1| NH(3)-dependent NAD synthetase [Borrelia recurrentis A1] gi|201085183|gb|ACH94757.1| NH(3)-dependent NAD synthetase [Borrelia recurrentis A1] Length = 522 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 170/548 (31%), Positives = 260/548 (47%), Gaps = 40/548 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+ + + + + E A + +D+++F +FI G E+L ++ +++ Sbjct: 7 VKICVAQIKCRIFRFNEILNEFKVNCEYAIQNKVDILVFPFIFIEGIEYENLFYRPEYVK 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ID +K D G +V G + + + ++ I ++N+P Sbjct: 67 KILYCIDFIKGQV-DAGLCVVFGHYNFYDGKLFDCISVVSDHQYILTTREVNVP------ 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 + Y I ++ +L + +K H ++L + S + K Sbjct: 120 ----VLFSYKGQSIAVLNLDDELLFHKSQYKF-----HDSFSKIDYLVIPSKSYFTCEKN 170 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R E +L I Y N G D ++FDG SF + ++ Q K F E Sbjct: 171 NLRLEFFKDVAIKNNLEIAYANLYGIYDSIVFDGLSFFINKYGKIK-QAKEFEYDILFNE 229 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 YD + D S ++ L A V+SLR+YV F KV +G+SGGID Sbjct: 230 EFYDLEF--------DCESKIFDKLL------GALVISLREYVALAGFEKVHLGVSGGID 275 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A IA ALG V I +P +++S S+ DA A LG + +PI + Sbjct: 276 SALVAYIACTALGANRVIGIFMPSRFSSKGSVLDAERLANELGFELIHMPIESMFQFSLD 335 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + +L + G+ EN+Q+R+RG LM+ SN ++++LL T NKSEI+VGY TLYGD G Sbjct: 336 YLDGYLNTK--GVTEENLQARLRGLFLMSYSNANRSLLLNTGNKSEIAVGYCTLYGDSCG 393 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 G + + DL+K V+ LA + N EVI +IL K PSAELR Q D +SLP Sbjct: 394 GISLIGDLFKLDVYNLARYVNKK-------EGREVIFSNILLKEPSAELRADQKDSDSLP 446 Query: 485 PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 Y +LD I+ R + E + + E V V L GSEYKRR+ P+ K++ K+FG Sbjct: 447 TYEVLDGILNRYLLENEPLELLYKSFGKEVVVRVLDLYSGSEYKRRKGPMIVKVSKKAFG 506 Query: 545 RDRLYPIS 552 D PIS Sbjct: 507 SDIFLPIS 514 >gi|187918386|ref|YP_001883949.1| glutamine-dependent NAD(+) synthetase [Borrelia hermsii DAH] gi|119861234|gb|AAX17029.1| glutamine-dependent NAD(+) synthetase [Borrelia hermsii DAH] Length = 522 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 170/549 (30%), Positives = 269/549 (48%), Gaps = 42/549 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI IAQ + +++ + E A + +D+++F +FI G ++L + ++ Sbjct: 7 VKICIAQTKCRLFKFKQILSEFKENYEYAIQNKVDILVFPFIFIGGIEYKNLFDRAEYLS 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D +K D +V G + +L+ + +++ + ++N+P ++ Sbjct: 67 KILYCLDFIKEQVDDR-LCVVFGHYSFYEGKLLDCISVVNNHRFVLTSREVNVPVLFDYK 125 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKN-SNICKHLKKQGAEFLFSLNASPYYHNK 183 K + D ++F+ E + SNI ++L + S + +K Sbjct: 126 GKSIAVLNLG-DELLFQGFD------EKFSASFSNI---------DYLLIPSKSYFTGDK 169 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R E +L + Y N G D ++FDG SF + ++ Q + F + Sbjct: 170 NNLRLEFFKKIAVKNNLEVAYANLYGTYDSIVFDGLSFFINKYGKIK-QAREFKDDILFN 228 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 E +D +L D S ++ L E A + SL++YV+ + F KV +G+SGGI Sbjct: 229 ERFHDLEL--------DCESKIFDRLIE------ALISSLKEYVKLSGFDKVHLGVSGGI 274 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A IA ALG V + +P +++S S+ DA A+ LG K +PI + Sbjct: 275 DSALVAYIACVALGAHRVVGVSMPSRFSSKGSVFDAKELARELGFKLIDMPIESMFQSAL 334 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + G+ EN+Q+R+RG LM+ SN +K++LL T NKSEI+VGY TLYGD Sbjct: 335 EFFDGYF--DTKGVTEENLQARLRGIFLMSYSNANKSLLLNTGNKSEIAVGYCTLYGDSC 392 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GG + DL+K V+ LA + N L VIP IL K PSAELRP Q D +SL Sbjct: 393 GGIALIGDLFKRDVYSLAKYIN-------LKEGRSVIPVDILLKEPSAELRPGQKDSDSL 445 Query: 484 PPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 P Y ILD+I+ + + ES + + E V V L SEYKRR+ P+ K++ K+F Sbjct: 446 PRYEILDEILSQYLLKNESLELLYESFGKEVVTKVLDLYSRSEYKRRKGPMIVKVSRKAF 505 Query: 544 GRDRLYPIS 552 G D L PIS Sbjct: 506 GNDILLPIS 514 >gi|203284429|ref|YP_002222169.1| NH(3)-dependent NAD synthetase [Borrelia duttonii Ly] gi|201083872|gb|ACH93463.1| NH(3)-dependent NAD synthetase [Borrelia duttonii Ly] Length = 522 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 170/548 (31%), Positives = 260/548 (47%), Gaps = 40/548 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+ + + + + E A + +D+++F +FI G E+L ++ +++ Sbjct: 7 VKICVAQIKCRIFRFNEILNEFKVNCEYAIQNKVDILVFPFIFIEGIEYENLFYRPEYVK 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ID +K D G +V G + + + ++ I ++N+P Sbjct: 67 KILYCIDFIKGQV-DAGLCVVFGHYNFYDGKLFDCISVVSDHQYILTTREVNVP------ 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 + Y I ++ +L + +K H ++L + S + K Sbjct: 120 ----VLFSYKGQSIAVLNLDDELLFHKSQYKF-----HDSFSKIDYLVIPSKSYFTCEKN 170 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R E +L I Y N G D ++FDG SF + ++ Q K F E Sbjct: 171 NLRLEFFKDVAIKNNLEIAYANLYGIYDSIVFDGLSFFINKYGKIK-QAKEFEYDILFNE 229 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 YD + D S ++ L A V+SLR+YV F KV +G+SGGID Sbjct: 230 EFYDLEF--------DCESKIFDKLL------GALVISLREYVALAGFEKVHLGVSGGID 275 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A IA ALG V I +P +++S S+ DA A LG + +PI + Sbjct: 276 SALVAYIACTALGANRVVGISMPSRFSSKGSVLDAERLANELGFELIHMPIESMFQFSLD 335 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + +L + G+ EN+Q+R+RG LM+ SN ++++LL T NKSEI+VGY TLYGD G Sbjct: 336 YLDGYLNTK--GVTEENLQARLRGLFLMSYSNANRSLLLNTGNKSEIAVGYCTLYGDSCG 393 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 G + + DL+K V+ LA + N EVI +IL K PSAELR Q D +SLP Sbjct: 394 GISLIGDLFKLDVYNLARYVNKK-------EGREVIFSNILLKEPSAELRADQKDSDSLP 446 Query: 485 PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 Y +LD I+ R + E + + E V V L GSEYKRR+ P+ K++ K+FG Sbjct: 447 TYEVLDGILNRYLLENEPLELLYKSFGKEVVVRVLDLYSGSEYKRRKGPMIVKVSKKAFG 506 Query: 545 RDRLYPIS 552 D PIS Sbjct: 507 SDIFLPIS 514 >gi|225552102|ref|ZP_03773042.1| NAD+ synthetase [Borrelia sp. SV1] gi|225371100|gb|EEH00530.1| NAD+ synthetase [Borrelia sp. SV1] Length = 512 Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 168/555 (30%), Positives = 273/555 (49%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D IA + +EA +G D+++F +F+ + + Q Sbjct: 1 MKISIAQTKYRALDFDKCIADFKINYDEALLRGSDVLVFPSMFLGNTKYGEFFGLSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K +D IV G + ++ + ++ +I + NLP + + Sbjct: 61 NICKFIEFMKEQVNDNTL-IVFGHSVYEGGKFVDVISVISNHKVILTVSQCNLPGFFSYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + I + D ++F+++ +LG ED+ K A++L + S + Sbjct: 120 DNLFAILNFE-DALLFKELIPKLG----EDLKK------------AQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L +IY N G +D ++DG SF + ++ Q K F Sbjct: 163 KNNLRLKFFQRVAIENNLDVIYSNFYGVEDSAVYDGCSFFINSFGKIK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+D+ + E E A LR YV + F KV +G+S Sbjct: 216 ----------EFDFISNDTFQDLKFDTSNELFEKIILAISFVLRKYVSFSGFSKVHLGVS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS+L A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGIDSSLVAYLACFALGAENVVGISMPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + S+F + + GI EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FEVSSRFFERYFDVKGITGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + + DL+KT+++ L ++ N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLSLIGDLFKTEIYDLVNYINAKFDQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + ES + + V V +L + +EYKR+Q K+ Sbjct: 435 DSDYLPKYEVLDVILNRYLIGNESVDSIYLNFEKGIVDKVLNLYFKNEYKRKQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SKKTFGFELSMPILN 509 >gi|219684272|ref|ZP_03539216.1| NAD+ synthetase [Borrelia garinii PBr] gi|219672261|gb|EED29314.1| NAD+ synthetase [Borrelia garinii PBr] Length = 512 Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 168/553 (30%), Positives = 270/553 (48%), Gaps = 48/553 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ V D IA + EEA +G ++++F +F+ + + + Q Sbjct: 1 MKISIAQTKYRVLDFNKCIADFKINYEEALLRGSEVLVFPSIFLDKTKHSEFFERSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ ++ D +V G+ ++ V + +I + NLP + + Sbjct: 61 NICKCIEFIREQVDDR-ILVVFGYSVYKGGKFVDVVSAISNHKVILTVSQCNLPGFFSYK 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 + + + D +F + LG E++ K A++L + S + K Sbjct: 120 DNVFAVLNFE-DASLFNE--LGPKFGENLKK------------AQYLIVPSKSYFTKEKN 164 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R + +L ++Y N G +D ++DG SF + ++ Q K F Sbjct: 165 NLRLKFFERVAVENNLDVVYSNFYGAEDSAVYDGCSFFINSFGKIK-QAKGF-------- 215 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +++++S+D+ + + E A L LR+YV + F KV +G+SGG Sbjct: 216 --------EFDFISNDAFQDLKFDTCNDFFEKIILAISLVLREYVCFSGFSKVHLGISGG 267 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 268 IDSALVACLACFALGDENVVGISMPSKFSSKGSISDAKELSRKLGFKLIEMPIKDL---- 323 Query: 363 FSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + S+FL+ + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TLYG Sbjct: 324 FEVSSRFLEGHFDVKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTLYG 383 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D GG + DL+KT+V+ L + N+ +IP +I+ K PSAELR Q D Sbjct: 384 DTCGGLALIGDLFKTEVYDLVKYINTKFDEC-------IIPVNIILKEPSAELRFDQKDS 436 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 + LP Y +LD I+ R + + ES + + V V L + +EYKRRQ K++ Sbjct: 437 DYLPKYEVLDVILNRYLIDNESVDSIYLHFEKSVVDKVLTLYFKNEYKRRQGAPIVKVSK 496 Query: 541 KSFGRDRLYPISN 553 K+FG + PI N Sbjct: 497 KTFGFELSIPILN 509 >gi|219685276|ref|ZP_03540096.1| NAD+ synthetase [Borrelia garinii Far04] gi|219673372|gb|EED30391.1| NAD+ synthetase [Borrelia garinii Far04] Length = 512 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 166/553 (30%), Positives = 270/553 (48%), Gaps = 48/553 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ V D IA + EEA +G ++++F +F+ + + + Q Sbjct: 1 MKISIAQAKYRVLDFNKCIADFKINYEEALLRGSEVLVFPSIFLDKTKHSEFFERSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K D +V G+ ++ V + +I + NLP + + Sbjct: 61 NICKCIEFIKEQVDDR-ILVVFGYSVYKGGKFVDVVSAISNHKVILTVSQCNLPGFFSYK 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 + + + D +F ++ + ++LKK A++L + S + K Sbjct: 120 DNVFAVLNFE-DASLFNEL------------SPKFGENLKK--AQYLIVPSKSYFTKEKN 164 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R + +L ++Y N G +D ++DG SF + ++ Q K F Sbjct: 165 NLRLKFFERVAVENNLDVVYSNFYGAEDSAVYDGCSFFINSFGKIK-QAKGF-------- 215 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +++++S+D+ + + E A L LR+YV + F KV +G+SGG Sbjct: 216 --------EFDFISNDAFQDLKFDTCNDFFEKIILAISLVLREYVCFSGFSKVHLGISGG 267 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL A +A ALG ENV I +P K++S S+ DA ++ LG + +PI DL Sbjct: 268 IDSALVACLACFALGAENVVGISMPSKFSSKGSISDAKELSRKLGFELIEMPIKDL---- 323 Query: 363 FSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TLYG Sbjct: 324 FEVSSRFFEGHFDVKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTLYG 383 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D GG + DL+KT+V+ L + N+ +IP +I+ K PSAELR Q D Sbjct: 384 DTCGGLALIGDLFKTEVYDLVKYINAKFDEC-------IIPVNIILKEPSAELRFDQKDS 436 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 + LP Y +LD I+ R + + ES + + V V L + +EYKRRQ K++ Sbjct: 437 DYLPKYEVLDVILNRYLIDNESVDSIYLHFEKSVVDKVLTLYFKNEYKRRQGAPIVKVSK 496 Query: 541 KSFGRDRLYPISN 553 K+FG + PI N Sbjct: 497 KTFGFELSIPILN 509 >gi|119713267|gb|ABL97333.1| putative NAD(+) synthase [uncultured marine bacterium HF10_12C08] Length = 246 Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 117/245 (47%), Positives = 157/245 (64%), Gaps = 3/245 (1%) Query: 316 LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS 375 LG E V+ I++P ++TS +S EDA K LG + + I D+VN + S +S + Sbjct: 1 LGPERVKGILMPSQFTSEESNEDANQLGKKLGIELISVSIEDIVNSYDSTLSNLFVGKEK 60 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 I ENIQSR RG ILMA SN M++T NKSE+SVGY TLYGDM GGF+ +KD+YK+ Sbjct: 61 DITEENIQSRTRGAILMAYSNKFGHMVVTNGNKSEVSVGYSTLYGDMCGGFSVVKDIYKS 120 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKR 495 +++L+ WRN + + EVIP +I+ K P+AEL+ Q D +SLPPY +LD I+ Sbjct: 121 DLYKLSEWRNENLPSFSAIKAKEVIPKNIIAKEPTAELKEDQKDSDSLPPYDVLDKILYL 180 Query: 496 IVENEESFINN--DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 +VE E S IN + Y V V++LLY SEYKRRQA G KI+ ++FG DR YPI+N Sbjct: 181 LVEKESS-INEIISKGYEPSLVTKVQNLLYNSEYKRRQAAPGVKISERNFGYDRRYPITN 239 Query: 554 KFRDH 558 FRD Sbjct: 240 AFRDK 244 >gi|226321830|ref|ZP_03797356.1| NAD+ synthetase [Borrelia burgdorferi Bol26] gi|226233019|gb|EEH31772.1| NAD+ synthetase [Borrelia burgdorferi Bol26] Length = 512 Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 168/555 (30%), Positives = 271/555 (48%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D IA + EA +G D+++F +F+ + + Q Sbjct: 1 MKISIAQAKYRALDFDKCIADFKINYYEALLRGSDVLVFPSMFLGNTKYGEFFGLSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K +D IV G + ++ + ++ I + NLP + + Sbjct: 61 NICKFIEFMKEQVNDNTL-IVFGHSVYEGGKFVDVISVISNHKAILTVSQCNLPGFFRYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + + + D ++F+++ + G ED+ K A++L + S + Sbjct: 120 DNLFAVLNFE-DALLFKEVIPKFG----EDLKK------------AQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L +IY N G +D ++DG SF + ++ Q K F Sbjct: 163 KNNLRLKFFQRVAIENNLDVIYSNFYGVEDSAVYDGCSFFINSFGKVK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+D+ + E E A L LR YV + F KV +G+S Sbjct: 216 ----------EFDFISNDTFQDLKFDTCNELFEKIILAISLVLRKYVSFSGFSKVHLGVS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGVDSALIAYLACFALGAENVVGISMPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L ++ N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLALIGDLFKTEVYDLVNYINAKFDQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + ES + ++ V V +L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEVLDVILNRYLIGNESVDSIYLDFEKGIVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SEKTFGFELSMPILN 509 >gi|312148340|gb|ADQ30999.1| NAD+ synthetase [Borrelia burgdorferi JD1] Length = 512 Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 168/555 (30%), Positives = 271/555 (48%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D IA + EA +G D+++F +F+ + + Q Sbjct: 1 MKISIAQAKYRALDFDKCIADFKINYYEALLRGSDVLVFPSMFLGNTKYGEFFGLSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K +D IV G + ++ + ++ I + NLP + + Sbjct: 61 NICKFIEFMKEQVNDNTL-IVFGHSVYEGGKFVDVISVISNHKAILTVSQCNLPGFFRYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + + + D ++F+++ + G ED+ K A++L + S + Sbjct: 120 DNLFAVLNFE-DALLFKEVIPKFG----EDLKK------------AQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L +IY N G +D ++DG SF + ++ Q K F Sbjct: 163 KNNLRLKFFQRVAIENNLDVIYSNFYGVEDSAVYDGCSFFINSFGKVK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+D+ + E E A L LR YV + F KV +G+S Sbjct: 216 ----------EFDFISNDTFQDLKFDTCNELFEKIILAISLVLRKYVSFSGFSKVHLGVS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGVDSALIAYLACFALGAENVVGISMPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L ++ N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLALIGDLFKTEVYDLVNYINAKFDQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + + ES + + V V +L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEVLDVILNRYLIDNESVDSIYLNFEKGIVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SEKTFGFELSMPILN 509 >gi|51598774|ref|YP_072962.1| NH(3)-dependent NAD+ synthetase [Borrelia garinii PBi] gi|51573345|gb|AAU07370.1| NH(3)-dependent NAD+ synthetase [Borrelia garinii PBi] Length = 512 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 166/555 (29%), Positives = 273/555 (49%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+I Q V D I + EEA +G ++++F +F+ +L + + Q Sbjct: 1 MKISIVQTKYRVLDFNQCIDDFKINYEEALLRGSEVLVFPSMFLDKTKHSELFERSQYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYSE 122 I+ ++ D I+V F +G +N + ++ +I + N P + Sbjct: 61 NICKFIEFIREQVDDR---ILVVFGHSVYKGGEFVNIISVISNHKVILTISQCNFPGFFS 117 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + + + + D ++F ++ + ++LKK A++L + S + Sbjct: 118 YKDNVFAVLNFE-DALLFNEL------------SPKFGENLKK--AQYLIVPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L ++Y N G +D ++DG SF + ++ Q K F Sbjct: 163 KNNLRLKFFERVAVENNLDVVYSNFYGAEDSAVYDGCSFFINSFGKIK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+D+ + + E A L LR+YV+ + F KV +G+S Sbjct: 216 ----------EFDFISNDAFQDLKFDTYNDFFEKIIIAISLVLREYVRFSGFSKVHLGVS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A +A ALG +NV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGIDSALVACLACFALGADNVVGISMPSKFSSTGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + S+FL+ + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FEVSSRFLEGHFDVKGVTEENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L + N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDACGGLALIGDLFKTEVYDLVKYINAKFDQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y LD I+ R + + ES + + V V L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEFLDVILSRYLIDNESVDSIYLHFEKGVVDKVLTLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SKKTFGFELSIPILN 509 >gi|88606869|ref|YP_505429.1| putative glutamine-dependent NAD(+) synthetase [Anaplasma phagocytophilum HZ] gi|88597932|gb|ABD43402.1| putative glutamine-dependent NAD(+) synthetase [Anaplasma phagocytophilum HZ] Length = 600 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 121/270 (44%), Positives = 167/270 (61%), Gaps = 5/270 (1%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y VL+LRDYV+K+ F V++GLSGGIDSAL AAIA DALG E+V T ML ++TS S Sbjct: 333 YQMLVLALRDYVKKSGFSGVLLGLSGGIDSALVAAIASDALGAEHVHTFMLTTRHTSQSS 392 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 + DA CA+ LG ++V+ I + + ++ EN+QSRIRG LMA+S Sbjct: 393 VTDAQRCAELLGTHHEVVSIEEAFCTCIESLKTYIDTPTPNNALENMQSRIRGMYLMAIS 452 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N + +LL T NKSE+ GY TLYGD GG+ P+ ++YKT+V+ L WRNS+ + L Sbjct: 453 NANSLLLLATGNKSELLTGYMTLYGDTCGGYAPINNVYKTKVYDLVKWRNSNIPANSLCR 512 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE---NEESFINNDQEYND 512 VIP +I+ K+PSAEL+P+QTDQ++LP Y LD I+ +V+ E + + Y + Sbjct: 513 KMHVIPENIITKAPSAELKPNQTDQDTLPEYDKLDGILSLLVDRFATREDIVLSG--YTE 570 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 E V V +L+ S +K Q G I AKS Sbjct: 571 EEVDLVMNLVKKSAFKLDQVAPGPDIRAKS 600 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 24/226 (10%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +I + QLN + N + EA+ D++LF+ + GY + + + +Q Sbjct: 3 RILVKQLNYGPNAVHSNCERILAECREAS--AGDIVLFSRYAVCGYFDKAPLLSGNLLQL 60 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKINLPNYS-EF 123 C+ +++L S A I+ G QD GVL ++ ++ GN I LP S Sbjct: 61 CNKHLESLASSIGSACA-IIGGLALQD--GVLTEAIYLISDGN---YEKLIELPISSYNA 114 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA----EFLFSLNASPY 179 EK +S +R+ +L+ E ++ H Q + L L S Y Sbjct: 115 AEKHIVLS--------LGGLRIALLLEEHTAHSNAQTWHGAYQNVPTDIDVLILLGRSQY 166 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + L + ++ I H IY+N +GG +F G S DG Sbjct: 167 SYYSLLSSNAAIS--IMQNHRAFIYLNILGGYGSDVFAGGSLIHDG 210 >gi|224534665|ref|ZP_03675237.1| NAD synthase family protein [Borrelia spielmanii A14S] gi|224513913|gb|EEF84235.1| NAD synthase family protein [Borrelia spielmanii A14S] Length = 515 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 172/555 (30%), Positives = 276/555 (49%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ V D I + EA +G D+++F +F+ +L + Q Sbjct: 1 MKISIAQTKYRVLDFDKCIDDFKINYNEALLRGSDVLVFPFMFLGHAGCGELFRYSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ID ++ +D IV G+ ++ + ++ +I + N P + + Sbjct: 61 NICKCIDFMREQVNDSTL-IVFGYSVYKDGKFVDIISVISDHEVILTVTQCNSPEFFTYK 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 + + + +D ++F+++ + ++LKK A +L + S + K Sbjct: 120 DNVFAVLNFEDD-LLFKEL------------SPKFGENLKK--ARYLIIPSKSYFTKEKN 164 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R ++ L +IY N G +D ++DG SF + +L Q K F Sbjct: 165 NLRLKLFERVAIENELDVIYSNFYGVEDSAVYDGHSFFINSSGKLK-QAKGF-------- 215 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +++++S+D+ + E E A L LR+YV F KV +G+SGG Sbjct: 216 --------EFDFISNDAFQDLKFDTCNELFEKIILAISLVLREYVGFLGFSKVHLGVSGG 267 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 268 IDSALVACLACFALGAENVVGISMPSKFSSEGSISDAKELSRKLGFKLIEMPIKDL---- 323 Query: 363 FSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + S+ + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TLYG Sbjct: 324 FEVSSRSFGDYFDVKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTLYG 383 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D GG + DL+KT+V+ LA + N+ +IP +I+ K PSAELR Q D Sbjct: 384 DTCGGLALIGDLFKTEVYDLAKYINAKFDQC-------IIPVNIILKEPSAELRFDQKDS 436 Query: 481 ESLPPYPILDDIIKR-IVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLP Y +LD I+ R +++NE FI++ + V V +L + +EYKRRQ K+ Sbjct: 437 DSLPKYEVLDVILNRYLIDNE--FIDSIYLHFEKGIVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SKKTFGFELPIPILN 509 >gi|223888702|ref|ZP_03623293.1| NAD+ synthetase [Borrelia burgdorferi 64b] gi|225548732|ref|ZP_03769779.1| NAD+ synthetase [Borrelia burgdorferi 94a] gi|223885518|gb|EEF56617.1| NAD+ synthetase [Borrelia burgdorferi 64b] gi|225370762|gb|EEH00198.1| NAD+ synthetase [Borrelia burgdorferi 94a] gi|312149113|gb|ADQ29184.1| NAD+ synthetase [Borrelia burgdorferi N40] Length = 512 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 168/555 (30%), Positives = 270/555 (48%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D IA + EA +G D+++F +F+ + + Q Sbjct: 1 MKISIAQAKYRALDFDKCIADFKINYYEALLRGSDVLVFPSMFLGNTKYGEFFGLSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K +D IV G + ++ + ++ I + NLP + + Sbjct: 61 NICKFIEFMKEQVNDNTL-IVFGHSVYEGGKFVDVISVISNHKAILTVSQCNLPGFFRYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + + + D ++F+++ + G ED+ K A++L + S + Sbjct: 120 DNLFAVLNFE-DALLFKEVIPKFG----EDLKK------------AQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L +IY N G +D ++DG SF + ++ Q K F Sbjct: 163 KNNLRLKFFQRVAIENNLDVIYSNFYGVEDSAVYDGCSFFINSFGKVK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+D+ + E E A L LR YV + F KV +G+S Sbjct: 216 ----------EFDFISNDTFQDLKFDTCNELFEKIILAISLVLRKYVSFSGFSKVHLGVS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGVDSALIAYLACFALGAENVVGISMPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L ++ N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLALIGDLFKTEVYDLVNYINAKFDQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + ES + + V V +L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEVLDVILNRYLIGNESVDSIYLNFEKGIVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SEKTFGFELSMPILN 509 >gi|224532714|ref|ZP_03673331.1| NAD+ synthetase [Borrelia burgdorferi WI91-23] gi|224512332|gb|EEF82716.1| NAD+ synthetase [Borrelia burgdorferi WI91-23] Length = 512 Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 168/555 (30%), Positives = 270/555 (48%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D IA + EA +G D+++F +F+ + + Q Sbjct: 1 MKISIAQAKYRALDFDKCIADFKINYYEALLRGSDVLVFPSMFLGNTKYGEFFGLSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K +D IV G + ++ + ++ I + NLP + + Sbjct: 61 NICKFIEFMKEQVNDNTL-IVFGHSVYEGGKFVDVISVISNHKAILTVSQCNLPGFFRYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + + + D ++F+++ + G ED+ K A++L + S + Sbjct: 120 DNLFAVLNFE-DALLFKELIPKFG----EDLKK------------AQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L +IY N G +D ++DG SF + ++ Q K F Sbjct: 163 KNNLRLKFFQRVAIENNLDVIYSNFYGVEDSAVYDGCSFFINSFGKVK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+D+ + E E A L LR YV + F KV +G+S Sbjct: 216 ----------EFDFISNDTFQDLKFDTCNELFEKIILAISLVLRKYVSFSGFSKVHLGVS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGVDSALIAYLACFALGAENVVGISMPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L ++ N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLALIGDLFKTEVYDLVNYINAKFNQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + ES + + V V +L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEVLDVILNRYLIGNESVDSIYLNFEKGIVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SEKTFGFELSMPILN 509 >gi|216264850|ref|ZP_03436842.1| NAD+ synthetase [Borrelia burgdorferi 156a] gi|215981323|gb|EEC22130.1| NAD+ synthetase [Borrelia burgdorferi 156a] Length = 512 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 168/555 (30%), Positives = 270/555 (48%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D IA + EA +G D+++F +F+ + + Q Sbjct: 1 MKISIAQAKYRALDFDKCIADFKINYYEALLRGSDVLVFPSMFLGNTKYGEFFGLSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K +D IV G + ++ + ++ I + NLP + + Sbjct: 61 NICKFIEFMKEQVNDNTL-IVFGHSVYEGGKFVDVISVISNHKAILTVSQCNLPGFFRYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + + + D ++F+++ + G ED+ K A++L + S + Sbjct: 120 DNLFAVLNFE-DALLFKELIPKFG----EDLKK------------AQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L +IY N G +D ++DG SF + ++ Q K F Sbjct: 163 KNNLRLKFFQRVAIENNLDVIYSNFYGVEDSAVYDGCSFFINSFGKVK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+D+ + E E A L LR YV + F KV +G+S Sbjct: 216 ----------EFDFISNDTFQDLKFDTCNELFEKIILAISLVLRKYVSFSGFSKVHLGVS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGVDSALIAYLACFALGAENVVGISMPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L ++ N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLALIGDLFKTEVYDLVNYINAKFDQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + ES + + V V +L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEVLDVILNRYLIGNESVDSIYLNFEKGVVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SEKTFGFELSMPILN 509 >gi|195941656|ref|ZP_03087038.1| NH(3)-dependent NAD+ synthetase [Borrelia burgdorferi 80a] gi|221218080|ref|ZP_03589546.1| NAD+ synthetase [Borrelia burgdorferi 72a] gi|224533645|ref|ZP_03674234.1| NAD+ synthetase [Borrelia burgdorferi CA-11.2a] gi|226321002|ref|ZP_03796547.1| NAD+ synthetase [Borrelia burgdorferi 29805] gi|221192028|gb|EEE18249.1| NAD+ synthetase [Borrelia burgdorferi 72a] gi|224513318|gb|EEF83680.1| NAD+ synthetase [Borrelia burgdorferi CA-11.2a] gi|226233603|gb|EEH32339.1| NAD+ synthetase [Borrelia burgdorferi 29805] Length = 512 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 168/555 (30%), Positives = 270/555 (48%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D IA + EA +G D+++F +F+ + + Q Sbjct: 1 MKISIAQAKYRALDFDKCIADFKINYYEALLRGSDVLVFPSMFLGNTKYGEFFGLSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K +D IV G + ++ + ++ I + NLP + + Sbjct: 61 NICKFIEFMKEQVNDNTL-IVFGHSVYEGGKFVDVISVISNHKAILTVSQCNLPGFFRYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + + + D ++F+++ + G ED+ K A++L + S + Sbjct: 120 DNLFAVLNFE-DALLFKELIPKFG----EDLKK------------AQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L +IY N G +D ++DG SF + ++ Q K F Sbjct: 163 KNNLRLKFFQRVAIENNLDVIYSNFYGVEDSAVYDGCSFFINSFGKVK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+D+ + E E A L LR YV + F KV +G+S Sbjct: 216 ----------EFDFISNDTFQDLKFDTCNELFEKIILAISLVLRKYVSFSGFSKVHLGVS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGVDSALIAYLACFALGAENVVGISMPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L ++ N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLALIGDLFKTEVYDLVNYINAKFDQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + ES + + V V +L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEVLDVILNRYLIGNESVDSIYLNFEKGIVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SEKTFGFELSMPILN 509 >gi|225549498|ref|ZP_03770464.1| NAD+ synthetase [Borrelia burgdorferi 118a] gi|225369775|gb|EEG99222.1| NAD+ synthetase [Borrelia burgdorferi 118a] Length = 512 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 169/557 (30%), Positives = 272/557 (48%), Gaps = 56/557 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D IA + EA +G D+++F +F+ + + Q Sbjct: 1 MKISIAQAKYRALDFDKCIADFKINYYEALLRGSDVLVFPSMFLGNTKYGEFFGLSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYSE 122 I+ +K +D I++ F EG ++ + ++ I + NLP + Sbjct: 61 NICKFIEFMKEQVNDN---ILIVFGHSVYEGGKFVDVISVISNHKAILTVSQCNLPGFFR 117 Query: 123 FHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + + + + D ++F+++ + G ED+ K A++L + S + Sbjct: 118 YKDNLFAVLNFE-DALLFKELIPKFG----EDLKK------------AQYLIIPSKSYFT 160 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + +L +IY N G +D ++DG SF + ++ Q K F Sbjct: 161 KEKNNLRLKFFQRVAIENNLDVIYSNFYGVEDSAVYDGCSFFINSFGKVK-QAKGF---- 215 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIG 298 +++++S+D+ + E E A L LR YV + F KV +G Sbjct: 216 ------------EFDFISNDTFQDLKFDTCNELFEKIILAISLVLRKYVSFSGFSKVHLG 263 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGG+DSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 264 VSGGVDSALIAYLACFALGAENVVGISMPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL 323 Query: 359 VNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 F + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY Sbjct: 324 ----FQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYC 379 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGD GG + DL+KT+V+ L ++ N+ +IP +I+ K PSAELR Sbjct: 380 TLYGDTCGGLALIGDLFKTEVYDLVNYINAKFDQC-------IIPVNIILKEPSAELRFD 432 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q D + LP Y +LD I+ R + ES + + V V +L + +EYKRRQ Sbjct: 433 QKDSDYLPKYEVLDVILNRYLIGNESVDSIYLNFEKGIVDKVLNLYFKNEYKRRQGAPIV 492 Query: 537 KITAKSFGRDRLYPISN 553 K++ K+FG + PI N Sbjct: 493 KVSEKTFGFELSMPILN 509 >gi|218249235|ref|YP_002375030.1| NAD+ synthetase [Borrelia burgdorferi ZS7] gi|218164423|gb|ACK74484.1| NAD+ synthetase [Borrelia burgdorferi ZS7] Length = 512 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 167/555 (30%), Positives = 270/555 (48%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D IA + EA +G D+++F +F+ + + Q Sbjct: 1 MKISIAQAKYRALDFDKCIADFKINYYEALLRGSDVLVFPSMFLGNTKYGEFFGLSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ +K +D IV G + ++ + ++ I + NLP + + Sbjct: 61 NICKFIEFMKEQVNDNTL-IVFGHSVYEGGKFVDVISVISNHKAILTVSQCNLPGFFRYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + + + D ++F+++ + G ED+ K ++L + S + Sbjct: 120 DNLFAVLNFE-DALLFKEVIPKFG----EDLKK------------TQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L +IY N G +D ++DG SF + ++ Q K F Sbjct: 163 KNNLRLKFFQRVAIENNLDVIYSNFYGVEDSAVYDGCSFFINSFGKVK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+D+ + E E A L LR YV + F KV +G+S Sbjct: 216 ----------EFDFISNDTFQDLKFDTCNELFEKIILAISLVLRKYVSFSGFSKVHLGVS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGVDSALIAYLACFALGAENVVGISMPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + S+F + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L ++ N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLALIGDLFKTEVYDLVNYINAKFDQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + ES + ++ V V +L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEVLDVILNRYLIGNESVDSIYLDFEKGIVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SEKTFGFELSMPILN 509 >gi|216263555|ref|ZP_03435550.1| NAD+ synthetase [Borrelia afzelii ACA-1] gi|215980399|gb|EEC21220.1| NAD+ synthetase [Borrelia afzelii ACA-1] Length = 512 Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 169/555 (30%), Positives = 268/555 (48%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D + + EA +G D+++F +F+ +L + Q Sbjct: 1 MKISIAQTKYRGLDFDKCLEDFKINYNEALLRGSDVLVFPSMFLDHTKYSELFGHSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ ++ D I+ G ++ + ++ +I + N P + + Sbjct: 61 NICKCIEFIREQVDDR-ILIIFGHSVYKDGKFVDIISVISDHKVILTVSQCNSPGFFTYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E + + D ++F+++ + G ++LKK A++L + S + Sbjct: 120 ENVFAVLNFE-DALLFKELIPKFG--------------ENLKK--AQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L I+Y N G +D ++DG SF + +L Q K F Sbjct: 163 KNNLRLKFFKRVAVENNLDIVYSNFYGAEDSAVYDGCSFFINSFGKLK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+DS + E E A L LR+YV + F KV +GLS Sbjct: 216 ----------EFDFISNDSFQDLKFDTCNELFEKIILAISLVLREYVCFSGFSKVHLGLS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGIDSALVACLACFALGAENVVGISMPSKFSSEGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F S+ + + G+ EN+Q+R+RG +LMA SN ++LL T NKSEI+VGY TL Sbjct: 324 --FEASSRSFESHFDVKGVTGENLQARLRGLLLMAYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L + N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLALIGDLFKTEVYDLVKYINAKFDQC-------IIPVNIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + + ES + + V V +L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEVLDIILNRYLIDNESVDSIYLYFEKSIVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SKKTFGFELSIPILN 509 >gi|111115348|ref|YP_709966.1| NH(3)-dependent NAD+ synthetase [Borrelia afzelii PKo] gi|110890622|gb|ABH01790.1| NH(3)-dependent NAD+ synthetase [Borrelia afzelii PKo] Length = 512 Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 168/555 (30%), Positives = 268/555 (48%), Gaps = 52/555 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ D + + EA +G D+++F +F+ +L + Q Sbjct: 1 MKISIAQTKYRGLDFDKCLEDFKINYNEALLRGSDVLVFPSMFLDHTKYSELFGHSKYSQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ ++ D I+ G ++ + ++ +I + N P + + Sbjct: 61 NICKCIEFIREQVDDRTL-IIFGHSVYKDGKFVDIISVISDHKVILTVSQCNSPGFFTYK 119 Query: 125 EKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E + + D ++F+++ + G ++LKK A++L + S + Sbjct: 120 ENVFAVLNFE-DALLFKELIPKFG--------------ENLKK--AQYLIIPSKSYFTKE 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + +L I+Y N G +D ++DG SF + +L Q K F Sbjct: 163 KNNLRLKFFERVAVENNLDIVYSNFYGAEDSAVYDGCSFFINSFGKLK-QAKGF------ 215 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++++S+DS + E E A L LR+YV + F KV +GLS Sbjct: 216 ----------EFDFISNDSFQDLKFDTCNELFEKIILAISLVLREYVCFSGFSKVHLGLS 265 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A +A ALG ENV I +P K++S S+ DA ++ LG K +PI DL Sbjct: 266 GGIDSALVACLACFALGAENVVGISMPSKFSSEGSISDAKELSRKLGFKLIEMPIKDL-- 323 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F S+ + + G+ EN+Q+R+RG +LM+ SN ++LL T NKSEI+VGY TL Sbjct: 324 --FEASSRSFESHFDVKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTL 381 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD GG + DL+KT+V+ L + N+ +IP +I+ K PSAELR Q Sbjct: 382 YGDTCGGLALIGDLFKTEVYDLVKYINAKFDQC-------IIPINIILKEPSAELRFDQK 434 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 D + LP Y +LD I+ R + + ES + + V V +L + +EYKRRQ K+ Sbjct: 435 DSDYLPKYEVLDIILNRYLIDNESVDSIYLYFEKSIVDKVLNLYFKNEYKRRQGAPIVKV 494 Query: 539 TAKSFGRDRLYPISN 553 + K+FG + PI N Sbjct: 495 SKKTFGFELSIPILN 509 >gi|225165886|ref|ZP_03727657.1| NAD(+) synthase (glutamine-hydrolyzing) [Opitutaceae bacterium TAV2] gi|224799868|gb|EEG18326.1| NAD(+) synthase (glutamine-hydrolyzing) [Opitutaceae bacterium TAV2] Length = 293 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 130/281 (46%), Positives = 169/281 (60%), Gaps = 10/281 (3%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 ++A VL LRDY K+ F + +I LSGGIDSAL AAIA +A G +NV I LP +S S Sbjct: 20 FDALVLGLRDYATKSGFKRALIALSGGIDSALVAAIAAEAFGPDNVTGIALPSAISSQHS 79 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 +DAAA A+ L YD + I V + ++ P + ENIQ+RIRG I+MALS Sbjct: 80 RDDAAALARNLNLHYDSIDIAAPVAATETALAAQFSGFPRDVAEENIQARIRGVIMMALS 139 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N A+LLTT NKSE++VGY TLYGDM GG + D++KTQV+ L+ W N Sbjct: 140 NKLGALLLTTGNKSELAVGYCTLYGDMCGGLAVISDVFKTQVYALSRWINRD-------- 191 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDET 514 E+IP S +EK PSAELRP Q DQ+SLPPY ILD I+ VE S +Q ++ Sbjct: 192 -REIIPRSTIEKPPSAELRPGQVDQDSLPPYDILDAILHGYVERGLSRAELAEQGFDPAV 250 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V V + +EYKR+QA G KIT +FG R P+ ++ Sbjct: 251 VNDVVRKVDLNEYKRKQAAPGLKITPLAFGTGRRIPLVQRY 291 >gi|218513775|ref|ZP_03510615.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli 8C-3] Length = 171 Score = 213 bits (541), Expect = 9e-53, Method: Composition-based stats. Identities = 94/161 (58%), Positives = 120/161 (74%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+ KAR AR +A ++G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLTKAREARADAAQEGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQD+ G NSV +LD G +IAVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTVDGGPGVIIGFPRQDENGRYNSVAVLDGGKVIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F G P+ FR IRLGI ICEDIW +C+ L + Sbjct: 131 EKRVFHQGAMPGPVNFRGIRLGIPICEDIWGELGVCETLAE 171 >gi|284048868|ref|YP_003399207.1| NAD+ synthetase [Acidaminococcus fermentans DSM 20731] gi|283953089|gb|ADB47892.1| NAD+ synthetase [Acidaminococcus fermentans DSM 20731] Length = 635 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 163/549 (29%), Positives = 258/549 (46%), Gaps = 71/549 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA AQ+ G+ N KA +A +A +D++L EL + GY DL + +F+Q Sbjct: 3 VKIACAQIQIEPGNPEANTRKALQAIAKARAAQVDILLLPELMVPGYLLGDLWEQSAFLQ 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV--------LNSVVILDAGNII------A 110 C + + + + G ++ G D V N+ + G ++ Sbjct: 63 DCEAWGREIIAASE--GLCVIFGNIATDPAKVNEDGRVRKYNAAFVAQDGKLLRGGLPYP 120 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDP------------------IVFRDIRLGILICED 152 K +LP+Y EF + R F S P + R+++LG+L+CED Sbjct: 121 FISKTSLPDYREFDDSRYFHSIAKLLPELGPDVTIEDLVKPVSLTLRGRELKLGVLLCED 180 Query: 153 IWKNS---NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 W + N+ + LKK GA+ L +L+ SPY +K +KRH++ Q +P++Y N VG Sbjct: 181 GWTENYHYNVPELLKKNGAQILCNLSCSPYTFHKNRKRHDLFVNQSRSCAIPLVYCNNVG 240 Query: 210 ----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM 265 G++ +DG S +D + ++ F E ++ W+ D S + Sbjct: 241 IQNNGKNVFTYDGCSCMYDARGEMVTDSPAFQEDLLVSLWNPDTG-------SIQGERGL 293 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 PL + + Y + ++ + K+ IG+SGGIDSA+ AA VD LG ENV + Sbjct: 294 QEPLSDAQEIYRSLRYGASLFLDQLGIRKMTIGVSGGIDSAVTAAFYVDILGPENVLLVN 353 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN-----------HFFSLMSQF-LQEE 373 +P +Y S + A A+ALG Y +LPI ++V+ H ++ + F L+ Sbjct: 354 MPSQYNSDLTKNLAQKMAEALGASYAILPIQEVVDKTILQFSSTDIHNYATGNDFHLKVT 413 Query: 374 PSGIVAENIQSRIRG-NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 P AENIQ+R RG +L L++ SNK+E++VGY T YGD++G + DL Sbjct: 414 P--FAAENIQARDRGARVLAGLASLFGGGFSCNSNKAEMTVGYATFYGDIAGVLALIGDL 471 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP--YPILD 490 +K QV+ L + N EVIP I + PSAEL QT P YP D Sbjct: 472 WKHQVYGLGRYLNEEVFRR------EVIPDEIFKIKPSAELSAAQTVGTGGDPLVYPYHD 525 Query: 491 DIIKRIVEN 499 +++ VE+ Sbjct: 526 YLLQAFVES 534 >gi|88608610|ref|YP_505997.1| NAD+ synthetase [Neorickettsia sennetsu str. Miyayama] gi|88600779|gb|ABD46247.1| NAD+ synthetase [Neorickettsia sennetsu str. Miyayama] Length = 268 Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 113/267 (42%), Positives = 161/267 (60%), Gaps = 5/267 (1%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 E Y + + LR Y++ + VI+GLSGGIDSAL AAIA DA G V+T+M+P YTS Sbjct: 2 EKYYLSVLHELRKYLKNTDMLDVIVGLSGGIDSALVAAIATDAFGNSRVRTVMMPSPYTS 61 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 SL+DA A LG + V+ I L+ F + S + E I +N+QSRIR LM Sbjct: 62 TDSLDDALEIAHRLGVAHTVIRIDGLLQSFKEVFSHCVTWEEQDITEQNLQSRIRAVTLM 121 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 LSN +K+M+L+TSN+SEI GY TLYGD GG+ P+ KTQV++LA WRN + S Sbjct: 122 GLSNKTKSMVLSTSNRSEILTGYFTLYGDSCGGYAPISPFLKTQVYKLAQWRNGNIPESS 181 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI-VENEESFINNDQEYN 511 + +IP S+L K+P+AEL+ +Q D + LP Y ILD I+ I + + + ++ D+ Sbjct: 182 MLQKISIIPESVLRKAPTAELKYNQRDCDELPEYEILDQILTAISCKQDLTILSIDERIV 241 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKI 538 V V+ ++YKRR P+G ++ Sbjct: 242 SMVVERVKK----AQYKRRYLPIGPEL 264 >gi|163744675|ref|ZP_02152035.1| NAD synthetase [Oceanibulbus indolifex HEL-45] gi|161381493|gb|EDQ05902.1| NAD synthetase [Oceanibulbus indolifex HEL-45] Length = 491 Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 168/560 (30%), Positives = 264/560 (47%), Gaps = 74/560 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ + QLNP VGD+ GN A+AR+A E G L+ E+F++G+ + L+ K Sbjct: 1 MSDRFRLTLGQLNPTVGDLPGNAAQARKAWEAGRDAGAQLVALPEMFLTGHNAKALLRKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + + ++ L + DG A + +G P + V N+ ++L G I + +L Sbjct: 61 AFQRDVLTHLEALAAHCADGPA-LALGAPWVEGTQVYNAYLVLIGGKIAHRVLQHSLERG 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S+F ISG P +R+G I D W ++ + + GAE L NA+P+ Sbjct: 120 SDFDA--APISG----PFAVAGLRIGAPIGTDGW-TGDVAETQAETGAELLLVPNAAPHQ 172 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 + +R + ++ LP+IY+N GGQDEL++DG SF + +LA + F + Sbjct: 173 RGAMDRRLNHMVARVIETELPLIYLNMTGGQDELVYDGGSFALNPGGKLALHLPAFDDA- 231 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T + W ++ D A E DY A V+ LRDYV K F +V++ + Sbjct: 232 -ITHVDLARGAEGWQIVAGDLAPQP----DALERDYRALVVGLRDYVTKMGFTQVLVEQA 286 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 G D+AL AA+A+DALG ENV+ I P K T+ +L D+ A LG K Sbjct: 287 EGNDTALTAALALDALGPENVRQIAPPAKGTAHSALRDSLA---ELGTK----------- 332 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + +++ +RG +L A ++ + MLLT NKS ++G + G Sbjct: 333 ----------------VSDDSLAPHLRGLMLRASADAAGEMLLTAQNKSAAAIGQAAMPG 376 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D FNP+KDLY+T+V L WRN LGP+ + PS SA Sbjct: 377 D----FNPIKDLYQTEVGDLCRWRNDARRDWMLGPVDAMPAPSQYSPEDSA--------- 423 Query: 481 ESLPPYPILDDIIKRIVENEESFINN--DQEYNDETVR-YVEHLLYGSEYKRRQAPVGTK 537 LD ++ RI+ NE + + YN ++ R EH+ R AP G + Sbjct: 424 --------LDGVL-RILLNENGTVGDCVAAGYNQQSAREAAEHISISQPQTHRSAP-GPQ 473 Query: 538 ITAKSFGRDRLYPISNKFRD 557 +TA YP + ++RD Sbjct: 474 LTAMRA----PYPTAARWRD 489 >gi|254796492|ref|YP_003081328.1| NAD+ synthetase [Neorickettsia risticii str. Illinois] gi|254589738|gb|ACT69100.1| NAD+ synthetase [Neorickettsia risticii str. Illinois] Length = 275 Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 110/253 (43%), Positives = 152/253 (60%), Gaps = 3/253 (1%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR Y++ + VI+GLSGGIDSAL A IA DA G V+T+M+P YTS S++DA Sbjct: 19 LRKYLKNTDTLDVIVGLSGGIDSALVATIATDAFGNSRVRTVMMPSPYTSTDSIDDALEI 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A LG + V+ I L+ F + S + E I +N+QSRIR ILM LSN + +M+ Sbjct: 79 AHRLGVAHTVIRIDGLLQSFKEVFSHCVTWEEQDITEQNLQSRIRAVILMGLSNKTNSMV 138 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L+TSN+SEI GY TLYGD GG+ P+ KTQV++LA WRN + S + T VIP Sbjct: 139 LSTSNRSEILTGYFTLYGDSCGGYAPISAFLKTQVYKLAQWRNGNIPESSMLQKTGVIPE 198 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLL 522 +L K+P+AEL+ +Q D + LP Y ILD I+ I+ ++ ++ V V + Sbjct: 199 PVLRKAPTAELKYNQKDCDELPEYEILDQILTAILCKQDL---TTLSIDERIVSMVVERV 255 Query: 523 YGSEYKRRQAPVG 535 +EYKRR P+G Sbjct: 256 KKAEYKRRYLPIG 268 >gi|163784679|ref|ZP_02179502.1| glutamine-dependent NAD(+) synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159880053|gb|EDP73734.1| glutamine-dependent NAD(+) synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 341 Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 128/344 (37%), Positives = 181/344 (52%), Gaps = 32/344 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+++A+AQ+NP VGDI N K ++A ++ +D+I F EL I+GYPPEDL+ K S Sbjct: 1 MKKIRLALAQINPTVGDIEKNAEKIIDYIKKAQKKEVDIIAFPELAITGYPPEDLLLKDS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI A A+ + T D ++VGF + QE + N+ +L G I+ + K LPNY Sbjct: 61 FINANLEAVKKIALHTKD--IIVIVGFVDK-QEDIYNAAGVLYNGEIVGIYHKNYLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F G + ++G+ ICEDIW N +GAE + ++NASPY Sbjct: 118 VFDEVRYFQKGNEITLLNIEGYKIGLSICEDIWYPENPINIQAIEGAELIININASPYTL 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ R E++ + + I YVN VGGQDEL+FDG+S + K F E Sbjct: 178 GKINYREEMLKVRAKDNFVSIAYVNMVGGQDELVFDGSSSVILPNGNFEVRGKSFEEDLL 237 Query: 242 MTEWHYD----QQLS-------QWNYMSDDSASTMY---------IPLQEE--------- 272 + + D QL + Y ++ ++ IPL E+ Sbjct: 238 VCDIDLDAIFRNQLKDNRLRNLRAKYKREERVKEIFLDYKIKKHEIPLNEKIVLNSLSEA 297 Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 E Y A VL L+DY++KN F KV+IGLSGGIDS+L A IA DAL Sbjct: 298 EEIYKALVLGLKDYIKKNGFEKVVIGLSGGIDSSLVATIATDAL 341 >gi|291533322|emb|CBL06435.1| NH(3)-dependent NAD(+) synthetase [Megamonas hypermegale ART12/1] Length = 632 Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 161/558 (28%), Positives = 261/558 (46%), Gaps = 75/558 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +Q++ N+ + +A +EA + D+I+F E+ I GY D + +F++ Sbjct: 2 VKICFSQIDVEPSHPDLNVERMLQAIDEAKQNNTDIIIFPEMCIPGYLLGDTWEQTAFLK 61 Query: 65 ACSSAIDTLKSDTHDGG---AGIVVGFPRQDQEGVL---NSVVILDAGNIIAVRD----- 113 C S + + + + D I V + +++ +G + N++ G +I Sbjct: 62 DCLSYGEDIIAASQDICIIFGNIAVDWDKKNTDGRVRKYNALYTAYNGKLIKPEKSPYPF 121 Query: 114 --KINLPNYSEFHEKRTFISGYS---------ND-------PIVFRDIRLGILICEDIWK 155 K PNY EF + R F S S ND I +++ LG ++CED W Sbjct: 122 VIKTLFPNYREFDDSRYFFSLQSLATELKLNLNDILSPVKVNIKGQELNLGCILCEDGWS 181 Query: 156 NSN-------ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQV 208 + +C++ K + L +++ASPY K KRH + Q ++P+IYVN + Sbjct: 182 DDYAFAPIDILCQNYK---LDMLINISASPYTFGKNNKRHRVFAKQAKDNNIPLIYVNNI 238 Query: 209 G----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST 264 G G+ FDG+S +D + + QN + N + +D + Sbjct: 239 GIQNNGKTIYTFDGSSTVYDENGNIIATCPAYKAQN-----------NYINLLGNDEYTP 287 Query: 265 MYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 + IP ++ ++ Y A ++ +++ KVIIG+SGGIDSA+ +A+ D LG EN+ Sbjct: 288 LPIPQNDDISNIYQALHYGIKKFLKNIRMQKVIIGISGGIDSAVASALYADILGAENITL 347 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL----VNHFFSLMSQFL------QEE 373 I +P K+ S + ++ A LGC Y ++PI ++ VN F + L + + Sbjct: 348 INMPSKFNSATTKGLSSQLAHNLGCNYAIVPIQEVVDFTVNQFENTDITHLATNDIHKVQ 407 Query: 374 PSGIVAENIQSRIR-GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 S V ENIQ+R R IL ++ +NK+E +VGY TLYGD SG L DL Sbjct: 408 VSSFVKENIQARDRSARILAGMAASIGGCFTCNANKAETTVGYSTLYGDQSGFLAGLADL 467 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESLPP--YPIL 489 +K QV++LA + N H EVIP I++ PSAEL Q D P YP Sbjct: 468 WKYQVYELAHYLNEHVYK------CEVIPQGIIDIVPSAELSSEQDVDAGKGDPIKYPYH 521 Query: 490 DDIIKRIVENEESFINND 507 D + + VE+ + D Sbjct: 522 DYLFRAFVESWQKVTPED 539 >gi|317485273|ref|ZP_07944153.1| NAD synthase [Bilophila wadsworthia 3_1_6] gi|316923399|gb|EFV44605.1| NAD synthase [Bilophila wadsworthia 3_1_6] Length = 280 Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 117/280 (41%), Positives = 168/280 (60%), Gaps = 10/280 (3%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 IP ++ ++ + +RDYV+KN F V++GLSGG+DSAL AA+AVDALGK++V +M+ Sbjct: 4 IPAKDWKSVWELLTSGIRDYVRKNGFTDVVLGLSGGMDSALVAALAVDALGKDHVHGVMM 63 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P ++S S+ D+ A A LG + +PI ++ F ++ + ENIQSRI Sbjct: 64 PSPWSSEGSITDSEALAANLGMETFTVPISPMMEAFEKALAPAFAGRERDVTEENIQSRI 123 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG I+M+ SN MLL T NKSE++ GY T+YGD GG P+ DLYKT+V+QLA W N Sbjct: 124 RGVIMMSFSNKFHWMLLATGNKSEVAAGYCTMYGDTCGGLAPIADLYKTEVYQLAQWFNE 183 Query: 447 H-GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 G+ + IP +I +K+PSAELRP Q DQ+SLP Y +LD I+ ++E + + Sbjct: 184 REGMCA--------IPQNIFDKAPSAELRPGQKDQDSLPEYDMLDSILHALIEESKRAED 235 Query: 506 ND-QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 D E V V+ L+ S +KR Q P + +FG Sbjct: 236 IDLPGVTPEDVNRVQSLMRRSAFKRLQLPPLLPVGNHAFG 275 >gi|300871886|ref|YP_003786759.1| NAD+synthetase [Brachyspira pilosicoli 95/1000] gi|300689587|gb|ADK32258.1| NAD+synthetase [Brachyspira pilosicoli 95/1000] Length = 625 Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 173/618 (27%), Positives = 282/618 (45%), Gaps = 97/618 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAI Q + N +K + EEA D+I+F EL +SGY D+ +SF++ Sbjct: 1 MKIAICQFEIIPSMPVINASKMIKYIEEARDNKADIIVFPELSVSGYMVGDMWESESFVR 60 Query: 65 AC---SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL---NSVVILDAGNIIAVRD----- 113 C I D + I + +++ +G + N++ + G +I Sbjct: 61 ECERLGEEIIKASKDIYVIFGNIALDKAKKNFDGRVRKYNALFVAKDGKLIDNNTTEYNF 120 Query: 114 --KINLPNYSEFHEKRTFIS----GYSND------------PIVFRDIRLGILICEDIW- 154 K LPNY EF + R F S ND I + I+LG+ ICED+W Sbjct: 121 FIKTLLPNYKEFDDSRHFYSLKDLALENDVSIKKYLKPLDIEINKQKIKLGLTICEDMWA 180 Query: 155 KNSNIC-KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG---- 209 KN N+ + K + ++++S Y K++ + + + P+IY N VG Sbjct: 181 KNYNVNPMEIMKDDVDMFINISSSFYILEDETKKNNMFSDIAKKYNKPLIYANNVGIQNN 240 Query: 210 GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL 269 G++ FDG S +D + +L + + E+ + E+ DD + I + Sbjct: 241 GKNVFTFDGCSRVYDEKGKLLLKGDRYKEEVYYIEF-------------DDKSKKEEIAV 287 Query: 270 QEE---EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 +EE + Y+ V +R +++ ++V+IG+SGGIDSAL +A+ V ALG +NV + + Sbjct: 288 KEENEYKLIYDTVVYGIRKFMKSIGMNRVVIGVSGGIDSALSSAMYVSALGADNVLLVNM 347 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM--SQFLQE------EPSGIV 378 P K+ S + A + + LGC Y V+PI + V++ + S ++E + S V Sbjct: 348 PSKFNSNTTKNLAKSLSDNLGCAYMVMPIQESVDYTIKQLETSPIIKEGKESFLKVSSFV 407 Query: 379 AENIQSRIRGN-ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 ENIQ+R R + IL A++ + +NK+E VGY T+YGD +G F L DL+K Q+ Sbjct: 408 TENIQARDRSSRILAAIAASFGGVFTCNANKTETIVGYSTMYGDGAGFFACLGDLWKYQI 467 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESLPP--YPILDDIIK 494 + LA + N EVIP + PSAEL Q D+ P Y D + K Sbjct: 468 YGLARYVNDKVYKR------EVIPEGTINIVPSAELSTAQAVDEGKGDPIKYDYHDYLFK 521 Query: 495 RIVENEESFINND---------------------QEYNDETVRYVEHL-LYGSEY----- 527 + E+ + I D ++Y + ++E L + +Y Sbjct: 522 TMFESWKRIIPEDVLEWYIDGVLEEKIGCKKGLLKKYFKTDIEFIEDLEKWWKQYTGMAV 581 Query: 528 -KRRQAPVGTKITAKSFG 544 KR QAP I+ ++FG Sbjct: 582 SKRIQAPPILSISKRAFG 599 >gi|225619428|ref|YP_002720654.1| NAD+ synthetase [Brachyspira hyodysenteriae WA1] gi|225214247|gb|ACN82981.1| D+ synthetase [Brachyspira hyodysenteriae WA1] Length = 630 Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 167/623 (26%), Positives = 281/623 (45%), Gaps = 103/623 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA++QL + N + +A ++ D+++F EL ISGY D+ + FI+ Sbjct: 1 MKIAVSQLEIIPSMPCDNTVRIISFISKAKKENADIVIFPELCISGYMIGDMFESEGFIR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF-------PRQDQEGVL---NSVVILDAGNIIAVRD- 113 C + L + GI V F +++ +G + N++ + G +I Sbjct: 61 EC----EELGEEIIKSSNGIYVIFGNVASDRKKKNFDGRIRKYNAMFVAKDGKLIHNNTT 116 Query: 114 ------KINLPNYSEFHEKRTFIS----GYSND--------PIVFR----DIRLGILICE 151 K LPNY EF + R F S + N+ P+ I+LG+ ICE Sbjct: 117 EYPFIIKSLLPNYKEFEDPRHFFSLKDLAFENNTDIKNYLKPLEIECNGEKIKLGLTICE 176 Query: 152 DIWKNSNICKHL----KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVH-LPIIYVN 206 D W + + + + + ++++SPY K KRH + G+I+ H P++Y N Sbjct: 177 DAWSKNYLFSPMDIINTNKDVDLFINISSSPYTLVKDAKRHSMY-GEIASKHNTPLVYTN 235 Query: 207 QVG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA 262 VG G+ FDG S +D L K + E + + + Sbjct: 236 NVGIQNNGKTVYTFDGGSSVYDNNGNLLLTGKRYEEDLYFIDIDVKNK---------SFG 286 Query: 263 STMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 T+ I + E + Y+ + +R +++ +KV+IG+SGGIDSAL +A+ V+A+GK+NV Sbjct: 287 KTIEIKEENEYKLIYDTVIYGIRKFMKSIGINKVVIGVSGGIDSALSSAMYVNAIGKDNV 346 Query: 322 QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM--SQFLQE------E 373 + +P K+ S + A + LGC Y V+PI + V++ + S ++E + Sbjct: 347 LLVNMPSKFNSNTTKNLAKTLSDNLGCAYMVVPIQESVDYTVKQLETSPIIKEGKEDHLK 406 Query: 374 PSGIVAENIQSRIRGN-ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 S V ENIQ+R R + +L A++ + +NK+E VGY T+YGD +G F L DL Sbjct: 407 LSSFVIENIQARDRSSRVLSAIAASFGGVFTCNANKTETMVGYSTMYGDGAGFFACLADL 466 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESLPPY----- 486 +K Q++ LA++ N E+IP + PSAEL Q D+ P Sbjct: 467 WKYQIYGLANYVNKEVFKK------EIIPEGTINIVPSAELSTAQAVDEGKGDPIKYDYH 520 Query: 487 -------------PILDDIIKRIVENE------------ESFINNDQEYNDETVRYVEHL 521 IL+DI++ +E + + + E+ D+ R+ + Sbjct: 521 DYLFKFLMESWNRAILEDILEFYIEGNLEEKIGCQKGILKKYFKSGAEFVDDLERWWKQY 580 Query: 522 LYGSEYKRRQAPVGTKITAKSFG 544 + KR QAP ++ +SFG Sbjct: 581 MGMGISKRIQAPPILAVSRRSFG 603 >gi|290968510|ref|ZP_06560049.1| NAD+ synthetase [Megasphaera genomosp. type_1 str. 28L] gi|290781506|gb|EFD94095.1| NAD+ synthetase [Megasphaera genomosp. type_1 str. 28L] Length = 632 Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 160/546 (29%), Positives = 246/546 (45%), Gaps = 66/546 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L I +AQ++ G+ N ++ A G D+I+F EL I GY D+ + FI Sbjct: 2 LTIGLAQIDIHAGNPRYNTETMKQQIRRAEDAGCDVIIFPELTIPGYFIGDVWEQADFIA 61 Query: 65 ---ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRD---- 113 AC I +DT G V PR+ Q+ N++ I I + Sbjct: 62 DAIACGEEIRQ-AADTITVIFGNVAMDPRRRQKDGRPRKYNALFIAQNRRFIGPENSPYP 120 Query: 114 ---KINLPNYSEFHEKRTFIS------GYSNDPIVFR-----------DIRLGILICEDI 153 K LPNY EF + R F S DP ++ LG LICED Sbjct: 121 YYIKTLLPNYREFSDTRYFTSLTEVAAEQHTDPTALLSPVTLSLGAAGNLCLGPLICEDS 180 Query: 154 WKNSNICKHLKKQGAEF----LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 W +S K ++ A++ +++ASP+ K ++RH + + + +H P +YVN G Sbjct: 181 WDDSYPLKPMETLAAQYPIDLFINISASPFTLGKNRRRHRLFSKTLKKLHCPAVYVNCTG 240 Query: 210 ----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM 265 G++ FDG+S ++ LA++ F+E+ + Y++ + + Sbjct: 241 IQNNGKNIYTFDGSSSAYNKDGSLAYEGTAFAEE--LAIVRYNETTRHFA-----TPQQN 293 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 + P E + Y A L ++ + KV+IG+SGGIDSA+ AA+ L EN+ + Sbjct: 294 HQPPTEIASIYTALHYGLTSFLAASGLQKVVIGVSGGIDSAVNAALYATVLPPENLLLVN 353 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG--------- 376 +P +Y S + A A L C Y V+P+ D V + Q +P Sbjct: 354 MPTRYNSETTRSLAKKTALNLNCPYAVIPVEDSVLLTEQQLQQVTNRQPRAARAPLTITQ 413 Query: 377 IVAENIQSRIRGN-ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 V EN+Q+R R + IL A++ + +NK+E+SVGY TLYGD +G DL+K Sbjct: 414 AVLENVQARDRSSRILAAVAAAFGGVFTCNANKAELSVGYATLYGDSAGFLALTGDLWKH 473 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESLPP--YPILDDI 492 Q++ LA + N H EVIP L+ PSAEL HQ D+ P YP D + Sbjct: 474 QIYDLARYLNDHVFKR------EVIPQGTLDIVPSAELSAHQKVDEGRGDPLIYPYHDYL 527 Query: 493 IKRIVE 498 + +E Sbjct: 528 LAAFIE 533 >gi|218680241|ref|ZP_03528138.1| NAD synthetase [Rhizobium etli CIAT 894] Length = 139 Score = 187 bits (475), Expect = 4e-45, Method: Composition-based stats. Identities = 82/128 (64%), Positives = 103/128 (80%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IAIAQLNP VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 LRIAIAQLNPTVGDVAGNLAKAREARTDAGREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQD+ G NSV +LD G +IAVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTADGGPGVIIGFPRQDEAGRYNSVAVLDGGKVIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISG 132 EKR F G Sbjct: 131 EKRVFHQG 138 >gi|296125152|ref|YP_003632404.1| NAD+ synthetase [Brachyspira murdochii DSM 12563] gi|296016968|gb|ADG70205.1| NAD+ synthetase [Brachyspira murdochii DSM 12563] Length = 630 Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 157/538 (29%), Positives = 247/538 (45%), Gaps = 90/538 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAI+Q+ + N + A A + D+I+F EL +SGY D+ K FI Sbjct: 1 MKIAISQIEIIPSMPCDNTVRIISAISSAKKNNADIIVFPELCVSGYMLGDMWESKGFIN 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF-------PRQDQEGVL---NSVVILDAGNIIAVRD- 113 C + L + GI V F +++ +G L N++ G +I Sbjct: 61 EC----EELGEEIIKSSNGIYVIFGNVASDKSKKNFDGRLRKYNALFAAKDGKLIHNNTT 116 Query: 114 ------KINLPNYSEFHEKRTFIS----GYSND--------PIVFR----DIRLGILICE 151 K LPNY EF + R F S + N+ P+ I+LG+ ICE Sbjct: 117 PYPFIIKSLLPNYKEFEDPRHFFSLKDLAFENNADIKEYLKPLEIECNGEKIKLGLTICE 176 Query: 152 DIWKNS---------NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVH-LP 201 D W ++ NI K + + ++++SPY K KRH++ G+I+ H +P Sbjct: 177 DAWSSNYSFSPMDIININKDV-----DLFINISSSPYTLVKDTKRHKMY-GEIASKHNIP 230 Query: 202 IIYVNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM 257 ++YVN VG G+ FDG S +D L + + + E Sbjct: 231 LVYVNNVGIQNNGKTVYTFDGGSSVYDNNGNLLLTANRYEDNVYYIEM------------ 278 Query: 258 SDDSASTMYIPLQEEEAD-----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 D + P++ +E D Y+ + ++ + + K++IG+SGGIDSAL +A+ Sbjct: 279 -DIKNKSYPKPIEIQEDDEYKFIYDTVIYGIKKFTKSIGVKKIVIGVSGGIDSALSSAMY 337 Query: 313 VDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM--SQFL 370 V ALGK+NV + +P K+ S + + A A LGC Y V+PI + V++ + S + Sbjct: 338 VSALGKDNVYLVNMPSKFNSSTTKDLAKTLADNLGCSYMVVPIQESVDYTVKQLESSPII 397 Query: 371 QE------EPSGIVAENIQSRIRGN-ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 ++ + S V ENIQ+R R + IL A++ + +NK+E VGY T+YGD + Sbjct: 398 KDGNENYLKLSSFVIENIQARDRSSRILSAIAASIGGVFTCNANKTETMVGYSTMYGDSA 457 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 G F L DL+K Q++ LA + N E+IP + PSAEL Q E Sbjct: 458 GFFACLADLWKYQIYGLAKYVNEKVFGE------EIIPEGTINIVPSAELSTAQAVDE 509 >gi|323702011|ref|ZP_08113680.1| NAD+ synthetase [Desulfotomaculum nigrificans DSM 574] gi|323533097|gb|EGB22967.1| NAD+ synthetase [Desulfotomaculum nigrificans DSM 574] Length = 636 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 157/554 (28%), Positives = 258/554 (46%), Gaps = 63/554 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q+ + G N EEA + ++I+F E+ I GY D + SF++ Sbjct: 3 IKIAMCQMEVIPGRPDINTETMLAMIEEARMKNAEIIVFPEMCIPGYLLGDTWEQTSFLK 62 Query: 65 ACSSAIDTLKSDTHDG---GAGIVVGFPRQDQEGVL---NSVVILDAGNIIA-------V 111 C S + + + ++D + V + + +G + N+ I ++ Sbjct: 63 DCESYGEQIIAKSNDLIIIFGNVAVDWDKIGDDGRVRKYNACFIAHDQKLLGGDNFPYPF 122 Query: 112 RDKINLPNYSEFHEKRTFISGYS------------NDPIVF----RDIRLGILICEDIWK 155 R K LPNY EF E+R F S P+ + LG ++CED W Sbjct: 123 RIKTLLPNYREFEEERHFYSLRKLAEELNQKLDELMQPVYLSYKGERLGLGCILCEDSWY 182 Query: 156 NSNICKHLK----KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-- 209 + K ++ K G ++++SP+ K KR+ + + Q +P++Y+N VG Sbjct: 183 ENYFTKPIELINNKGGVHLFINISSSPFTLGKNNKRNRLFSRQARETGVPLVYINNVGIQ 242 Query: 210 --GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI 267 G+ FDG+S ++ + + + +Q+ D LS + S + Sbjct: 243 NNGKTIYTFDGSSTIYNCRGNIIYHCHQPFKQSLDI---VDLNLSNGGTNKNIINS---V 296 Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 P Q+ Y + +++ + + +KV+IG+SGGIDSA+ AA+ ALG ENV + +P Sbjct: 297 PDQDISCIYRSLDYAVKKFTKSIGINKVVIGVSGGIDSAVSAALYTKALGPENVMLVNMP 356 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM----------SQFLQEEPSGI 377 KY S + + A A LGC YDVLPI ++V+H + ++ + + S Sbjct: 357 SKYNSNTTKDLAKILANNLGCFYDVLPIQEVVDHTIKQIENNPAVRLADNKKINLKISPF 416 Query: 378 VAENIQSRIRGNILMALSNHSKAMLLTT-SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 +AENIQ+R R L+A + + T +NKSE++VGY TLYGD +G L DL+K Q Sbjct: 417 IAENIQARDRSARLLAAVAAAFGGVFTCNANKSEMTVGYSTLYGDQAGFLAALADLWKHQ 476 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP---YPILDDII 493 V++LA + N + EVIP I+ PSAEL Q+ + + YP D + Sbjct: 477 VYELAHYLNQYVYGH------EVIPQGIINLVPSAELSFEQSVDKGMGDPIIYPYHDYLF 530 Query: 494 KRIVENEESFINND 507 + +E E D Sbjct: 531 RSFIEPWERVTPED 544 >gi|260881079|ref|ZP_05403553.2| NAD synthase family protein [Mitsuokella multacida DSM 20544] gi|260849451|gb|EEX69458.1| NAD synthase family protein [Mitsuokella multacida DSM 20544] Length = 633 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 164/560 (29%), Positives = 255/560 (45%), Gaps = 89/560 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 MLK LKIA+AQ+ V G N A R EEA +G D+++F E+ + GY D + Sbjct: 1 MLKLLKIAMAQMEVVPGHPDVNTATILRFIEEARAKGADVVIFPEMAVPGYFLGDTWEQS 60 Query: 61 SFIQACSSA---IDTLKSDTHDGGAGIVVGFPRQDQEGVL---NSVVILDAGNIIAVRD- 113 +F++ C S I D + + + +++ +G + N+ I G +I + Sbjct: 61 AFLRDCESYGRDIIAASKDITVMFGNVAIDWQKKNNDGRVRKYNAFFIARDGELIQPDNM 120 Query: 114 ------KINLPNYSEFHEKRTFIS--------GYSNDPIV------FRD--IRLGILICE 151 K +PNY EF + R F S G + ++ RD R+G L+CE Sbjct: 121 PYPYTIKTLMPNYREFDDTRHFFSLQKLARELGTTPSKLLSPVTLKIRDDYYRVGCLLCE 180 Query: 152 DIWKNSNICKHLK----KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ 207 D W + + K+ +F +++ASPY K KR+ + Q +P+ YVN Sbjct: 181 DGWSDDYEFAPFELLEEKEQLDFYVNISASPYTLGKNDKRNRVFGRQAREAGVPLFYVNC 240 Query: 208 VG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAS 263 +G G+ FDG+S ++ + + + E +T + M D A Sbjct: 241 IGLQNNGKTVYTFDGSSTAYNESGHVVRTLPEYEE--VLT-------ILPLAGMKDMPA- 290 Query: 264 TMYIPLQEEEAD-------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 E+EAD Y A + ++ + K++IG+SGGIDSA+ AA+ + Sbjct: 291 -------EKEADEPDIAHIYRALHYGIGHFLANIHMKKIVIGISGGIDSAVAAALYAKVV 343 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-- 374 G EN+ + +P + S + + A LGC+Y ++PI + V+H + L+E P Sbjct: 344 GPENLLLVNMPSVFNSATTKGLSQELANNLGCQYMIIPIQESVDHTI----KQLEETPMV 399 Query: 375 ------------SGIVAENIQSRIR-GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 S VAENIQ+R R +L + +NK+E +VGY TLYGD Sbjct: 400 HLGTGSESHLRVSSFVAENIQARDRSARVLAGAAAAFGGGFTCNANKAETTVGYSTLYGD 459 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQ 480 SG L DL+K QV+ LA + N T+ G EV+P I++ PSAEL Q D+ Sbjct: 460 QSGFLAALADLWKYQVYALAHYMN----TTVYG--REVVPQGIIDIVPSAELSSAQNVDE 513 Query: 481 ESLPP--YPILDDIIKRIVE 498 P YP D + + VE Sbjct: 514 GKGDPIKYPYHDFLFRSFVE 533 >gi|330838658|ref|YP_004413238.1| NAD+ synthetase [Selenomonas sputigena ATCC 35185] gi|329746422|gb|AEB99778.1| NAD+ synthetase [Selenomonas sputigena ATCC 35185] Length = 629 Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 158/558 (28%), Positives = 247/558 (44%), Gaps = 75/558 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI- 63 LKIA AQ+ G N A R EEA D+++F E+ I GY D + +F+ Sbjct: 2 LKIASAQMEIQPGRPDANTANILRQMEEAKANHADIVIFPEMAIPGYLLGDTWEQDAFLR 61 Query: 64 --QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRD----- 113 +AC++ + + V + +++ +G N+ + G + Sbjct: 62 DAEACAADVIAASEGIAVIFGSVAVDWTKKNNDGRPRKYNACFVASEGKLCHPEAMPYPF 121 Query: 114 --KINLPNYSEFHEKRTFIS--------GYSNDPIVF--------RDIRLGILICEDIWK 155 K LPNY EF + R F S G + ++ R ++G L+CED W Sbjct: 122 VIKTLLPNYREFDDTRHFFSLQKLARELGTTPKSLISPVSLKIRGRRWKIGCLLCEDGWS 181 Query: 156 NSNICKHLK----KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-- 209 ++ +K + +F ++++SPY K +KR + + P+IYVN VG Sbjct: 182 DNYETAPMKLLEEYEDLDFYVNISSSPYTLGKDEKRRRLFSAAAKAAGTPLIYVNNVGLQ 241 Query: 210 --GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI 267 G+ FDGAS + + + E +Y+ + +++ Sbjct: 242 NNGKTVYTFDGASAVYSAEGLCVTAAPSYEEG--------------LHYIDVEEIASLPA 287 Query: 268 PLQEEEAD----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 E++ + Y A +R+++ + KV++G SGGIDSA+ AA+ LG ENV Sbjct: 288 RTPEKKTEIAQIYEALSYGVRNFLDSIDMKKVVVGASGGIDSAVAAALYTSVLGAENVLL 347 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE----------E 373 + +P ++ S + + A A AK LGC Y V PI + V H ++ E Sbjct: 348 VNMPSRFNSETTKDLAHALAKNLGCYYAVFPIEESVQHTMEQIAATPIELLKTGEKKTLA 407 Query: 374 PSGIVAENIQSRIRGN-ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 S +AENIQ+R R + IL AL+ +NK+E SVGY TLYGD +G L DL Sbjct: 408 VSSFLAENIQARDRSSRILAALAAAFGGGFSCNANKAETSVGYSTLYGDQAGFLAALADL 467 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESLPP--YPIL 489 +K QV+ LA + N H EV+P + ++ PSAEL Q D+ P YP Sbjct: 468 WKHQVYDLARYMNEHIFKR------EVVPQATIDIVPSAELSDAQNVDEGKGDPLLYPYH 521 Query: 490 DDIIKRIVENEESFINND 507 D + + VE E D Sbjct: 522 DYLFRAFVERWEKATPED 539 >gi|115379832|ref|ZP_01466899.1| NH3-dependent NAD+ synthetase [Stigmatella aurantiaca DW4/3-1] gi|310818275|ref|YP_003950633.1| nh3-dependent nad+ synthetase [Stigmatella aurantiaca DW4/3-1] gi|115363166|gb|EAU62334.1| NH3-dependent NAD+ synthetase [Stigmatella aurantiaca DW4/3-1] gi|309391347|gb|ADO68806.1| NH3-dependent NAD+ synthetase [Stigmatella aurantiaca DW4/3-1] Length = 629 Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 159/623 (25%), Positives = 266/623 (42%), Gaps = 86/623 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +K+ +A +N VG + N+ +A + + L LF E I GYP EDLV + Sbjct: 1 MRLIKVGLASVNTTVGAFSRNVDRALTLARRMAAEDVTLGLFQEQLIGGYPAEDLVQWQG 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI ++ +T V+G Q LN ++ AG+++ + K LP Y+ Sbjct: 61 FIDHQWPELERFARETAALSTVFVLGVAVAHQGLRLNCAAVVAAGHVLGLVPKEKLPTYN 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRL---------GIL---ICEDIWKNSNICKHLKKQGAE 169 F+E RT+ GY V R + L G+L +CEDIW + GAE Sbjct: 121 IFYEGRTYSRGYPGMAEVHRGVPLGDYLFRFDFGVLAPEVCEDIWSADGPQRRRTYSGAE 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF-------- 221 + +L+ASP+ + R E++ + + I Y N +G D +IFDG F Sbjct: 181 LVVNLSASPFRLGFVDTRRELLATRAADHQCTIAYANALGSNDGIIFDGGGFLNQNGRSI 240 Query: 222 -------------CFDGQQQLAFQMKHFSEQNFMTEWHYD---------------QQLSQ 253 D ++ + + ++ + ++ EW D + + Sbjct: 241 LETPRFQEGFTSAVVDLERTMRLRAENTTWRSDREEWVADGGKLVPILDCMGILQTRREK 300 Query: 254 WNYMSDDSASTMYIPLQEE---------EADYNACVLSLRDYVQKNNFHKVI-IGLSGGI 303 Y S S ++P ++ E +A L + DY +K KVI + LSGG Sbjct: 301 LAYPSPPHRS-FFLPGPDQRRPAREALCEDILDALALGVGDYFEKTRAFKVIGVSLSGGR 359 Query: 304 DSALCAAIA---VDALGKEN----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 DS L IA + +N +Q +P +Y+S + + A + LG + V+PI Sbjct: 360 DSLLTLLIAHRYAKRVRPDNPGSLLQAFYMPSRYSSDTTRDAAETITRELGVPFQVIPIE 419 Query: 357 DLVNHFFSLMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + +++ Q L ++ + + +NIQ+R+R + SN S + L T N SE +VGY Sbjct: 420 EAFDRELAVVKQMLGDKAVTHLTEQNIQARLRAQRMWNWSNSSSGLFLQTGNMSEKAVGY 479 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T+ GD+ G + ++ KT V L + G+ +L K EL Sbjct: 480 TTIGGDLMGALAVIANVPKTVVMYLLDYLQEKTGYEGI--------RKVLSKPAGPELAH 531 Query: 476 HQTDQESLPPYPILDDII-----KRIVENE--ESFINNDQEYNDETVR-YVE---HLLYG 524 +Q +E L P+PILD +++V E ++ + E ++ YVE L Sbjct: 532 NQVGEEELMPFPILDACFYLFAGEKLVPAELVQALTSMFPEVEPSQIKVYVEKFVRLFLQ 591 Query: 525 SEYKRRQAPVGTKITAKSFGRDR 547 S YK Q+P+ I R+R Sbjct: 592 SIYKWVQSPLSLHIGNLDLDRER 614 >gi|312130302|ref|YP_003997642.1| nad+ synthetase [Leadbetterella byssophila DSM 17132] gi|311906848|gb|ADQ17289.1| NAD+ synthetase [Leadbetterella byssophila DSM 17132] Length = 660 Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 159/573 (27%), Positives = 254/573 (44%), Gaps = 89/573 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ A LN D AGN +A EA +G+ ++ EL ISGY ED + Q Sbjct: 2 LKVGAAALNQTPLDWAGNRKNILKAIHEAKAEGVQILCLPELCISGYGCEDAFYAPDVTQ 61 Query: 65 ACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 ++ + + GIV VG P + + + N+ ++ G ++ K +LPNY Sbjct: 62 RSLESLAIVA----EASVGIVTCVGLPIRLRNKIYNAAALITDGEVLGFVLKQHLPNYGV 117 Query: 123 FHEKRTF----------ISGYSND-PI--VFRDI---RLGILICEDIWKNSNICKHLKKQ 166 F+E R F IS P+ +F +I RLGI ICED W L ++ Sbjct: 118 FYEDRWFQRWKPGKTGSISWKGKTYPVGDLFFEIGGYRLGIEICEDAWVPQRPGSKLNEK 177 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-ELIFDGASFCFDG 225 G +F+ + +ASP+ K + R ++VT IY N +G + LIFDG + G Sbjct: 178 GVDFILNPSASPFSFGKFQTREKLVTDASRAFSCVYIYSNLLGNESGRLIFDGDTMISTG 237 Query: 226 QQQLA----FQMKHFS------------------EQNFMTEWHYDQQLSQWN-YMSDDSA 262 + +A F ++ + ++ ++ + + QW + S Sbjct: 238 GELVASSDRFSYADYTLTTAIVEVETNRIEQAKIKSEYLQDFSFISKEHQWEETFTPTST 297 Query: 263 STMYIPLQ-----EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI------ 311 + P + +EE A L L DY++K+ + LSGG DS+ C A+ Sbjct: 298 KALLEPFERGGHLKEEEFARAVSLGLFDYLRKSRSFGFTLSLSGGADSSACLALCTLMLR 357 Query: 312 -AVDALGKEN-------------------VQTIMLPYKY-----TSPQSLEDAAACAKAL 346 A +++G E +Q++++ Y +S +L+ AAA AK Sbjct: 358 LAEESVGLEKLKDKLSYIPGVKECQDLAQIQSLLMITLYQGTRNSSEDTLQSAAALAKDC 417 Query: 347 GCKYDVLPIHDLVNHFFSLMSQ----FLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 G ++ V I DLV+ + ++Q L E I +NIQ+R+R + L+N +L Sbjct: 418 GARFFVFDIDDLVSSYTEKVAQQIDRKLSWETDDIPLQNIQARVRAPGVWLLANIHNHLL 477 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 LTTSN+SE +VGY T+ GD +G P+ + KT + W G L Sbjct: 478 LTTSNRSEAAVGYCTMDGDTAGSIAPISGIDKTWLRTWLVWLEKVGCEVKGKHLRLEGLK 537 Query: 463 SILEKSPSAELRP---HQTDQESLPPYPILDDI 492 + P+AELRP QTD++ L PYP+L+ + Sbjct: 538 YVNALQPTAELRPIERTQTDEKDLMPYPVLNQL 570 >gi|121535218|ref|ZP_01667033.1| NAD+ synthetase [Thermosinus carboxydivorans Nor1] gi|121306209|gb|EAX47136.1| NAD+ synthetase [Thermosinus carboxydivorans Nor1] Length = 634 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 161/558 (28%), Positives = 248/558 (44%), Gaps = 88/558 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQ+ + G N R EA +Q DL++F E+ I GY D + +F++ Sbjct: 2 LRIAMAQMEVIPGRPDINTKTMLRMINEARQQRADLVIFPEMAIPGYLLGDTWEQPAFLR 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF--------PRQDQEGV--LNSVVILDAGNIIA---- 110 C D GI V F R D V N+ + G ++ Sbjct: 62 DC----DYYGRKIIAASDGICVVFGNVAVDWDKRGDDGRVRKYNACFVAQNGALLGGENF 117 Query: 111 ---VRDKINLPNYSEFHEKRTFIS--------GYSNDPIV--------FRDIRLGILICE 151 R K PNY EF + R F S G + + ++ R +RLG L+CE Sbjct: 118 PYPFRIKTLHPNYREFDDTRHFFSLRKLALELGVTAEELLQPVTAWVNGRPLRLGCLLCE 177 Query: 152 DIWKNSNICKHL----KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ 207 D W + K + +K+ + L ++++SP+ K KR+ + + Q + +P+IYVN Sbjct: 178 DGWSDDYFTKPIEILRQKERLDALINISSSPFTLGKNNKRNRVFSKQAADSRIPLIYVNN 237 Query: 208 VG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNY------M 257 VG G+ FDG S ++ + ++ F E +D L+ + Sbjct: 238 VGLQNNGKTVYTFDGFSTAYNCRGEIIAYCPPFQEMLHC----FDLDLANGGLQQPPLAV 293 Query: 258 SDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALG 317 DDS ++ Y A + ++ +V+IG+SGGIDSA+ AA+ LG Sbjct: 294 PDDSGI---------DSIYQALRYGVEKFLAAIGMKRVVIGVSGGIDSAVTAALYTQVLG 344 Query: 318 KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS---------- 367 + V + +P +Y SP + AA A+ LGC Y V+PI V+H +S Sbjct: 345 PDRVLLVNMPSRYNSPTTKSLAADLARNLGCLYTVVPIQQSVDHTVDQISRTPIVNLSAG 404 Query: 368 --QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT-SNKSEISVGYGTLYGDMSG 424 Q L+ P + ENIQ+R R + ++A + T +NKSE++VGY TLYGD +G Sbjct: 405 GEQTLEVTP--FMTENIQARDRSSRVLAGLAAAFGGGFTCNANKSELTVGYSTLYGDQAG 462 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESL 483 L DL+K QV+ L + N +VIP E PSAEL Q D+ Sbjct: 463 FLAALADLWKHQVYALGQYLNDEVYKQ------DVIPRKTFELVPSAELSVEQAVDEGKG 516 Query: 484 PP--YPILDDIIKRIVEN 499 P YP D + + +E+ Sbjct: 517 DPLIYPYHDYLFRAFIEH 534 >gi|134299319|ref|YP_001112815.1| NAD+ synthetase [Desulfotomaculum reducens MI-1] gi|134052019|gb|ABO49990.1| NH(3)-dependent NAD(+) synthetase [Desulfotomaculum reducens MI-1] Length = 635 Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 168/559 (30%), Positives = 259/559 (46%), Gaps = 88/559 (15%) Query: 4 KLKIAIAQLNPVVGDIAGN-------IAKARRAREEANRQGMDLILFTELFISGYPPEDL 56 KLKI I Q+ + G N I +AR AR D+++F E+ I GY D Sbjct: 2 KLKIMIGQMEVIPGHPDQNTNTMLEMIGQAREAR-------ADMVVFPEMCIPGYLLGDT 54 Query: 57 VFKKSFIQACSSAIDTLKSDTHD-----GGAGIVVGFPRQDQEGVL---NSVVILDAGNI 108 ++SF++ C + + + G GI + ++ +G + N+ + G + Sbjct: 55 WEQQSFLRDCEEYGREIVAASQGLTVLFGNVGI--DWDKKGDDGRVRKYNAFFVAQNGKL 112 Query: 109 I-------AVRDKINLPNYSEFHEKRTFIS------GYSNDP----------IVFRDIRL 145 + + R K PNY EF ++R F S Y P I + + L Sbjct: 113 LGRENFPYSFRIKTLQPNYREFDDERHFYSLRKLAQEYGKSPEELLSPVYVNIGGQKLAL 172 Query: 146 GILICEDIWKN----SNICKHLKKQGAEFLF-SLNASPYYHNKLKKRHEIVTGQISHVHL 200 G L+CED W + LK++G LF ++++SP+ K +KR+ I + Q + Sbjct: 173 GCLLCEDGWSEDFYVTKPVTALKEKGPIDLFINISSSPFTVGKNQKRNRIFSRQAQEAAV 232 Query: 201 PIIYVNQVG----GQDELIFDGASFCFDGQQQ-LAFQMKHFSEQNFMTEWHYDQQLSQWN 255 P+IYVN VG G+ FDG+S + + + + + FS+ + E H + Sbjct: 233 PLIYVNNVGIQNNGKTIYAFDGSSTVYAKNGEVINYCSEPFSQSAEIFELHLN------- 285 Query: 256 YMSDDSASTM--YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 SD S ST I QE + Y A +R ++ KV+IG+SGGIDSA+ AA+ Sbjct: 286 --SDGSPSTAGKLIDNQETISVYQALNYGVRQFLSSIGMKKVVIGISGGIDSAVSAALYA 343 Query: 314 DALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF---- 369 DA+G EN+ + +P K+ S + A A+ L C Y VLPI V++ + Sbjct: 344 DAIGPENLLLVNMPSKFNSQTTKNLARELAENLRCFYTVLPIQKSVDYTLKQIESTPIIN 403 Query: 370 ------LQEEPSGIVAENIQSRIRGN-ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 +Q + S +AENIQ+R R + IL A++ +NK+E +VGY TLYGD Sbjct: 404 AASGDRIQLKISSFMAENIQARDRSSRILAAVAAAFGGGFTCNANKAETTVGYSTLYGDQ 463 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT--DQ 480 +G + DL+K QV+ LA + N EVIP I++ PSAEL Q D Sbjct: 464 AGFLAAIADLWKYQVYDLARYLNQQVYHR------EVIPQGIIDIVPSAELSFDQAVDDG 517 Query: 481 ESLP-PYPILDDIIKRIVE 498 + P YP D + + V+ Sbjct: 518 KGDPLVYPYHDYLFRAFVQ 536 >gi|260887366|ref|ZP_05898629.1| NAD synthase family protein [Selenomonas sputigena ATCC 35185] gi|260862904|gb|EEX77404.1| NAD synthase family protein [Selenomonas sputigena ATCC 35185] Length = 621 Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 151/542 (27%), Positives = 239/542 (44%), Gaps = 75/542 (13%) Query: 21 GNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI---QACSSAIDTLKSDT 77 N A R EEA D+++F E+ I GY D + +F+ +AC++ + Sbjct: 10 ANTANILRQMEEAKANHADIVIFPEMAIPGYLLGDTWEQDAFLRDAEACAADVIAASEGI 69 Query: 78 HDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRD-------KINLPNYSEFHEKR 127 + V + +++ +G N+ + G + K LPNY EF + R Sbjct: 70 AVIFGSVAVDWTKKNNDGRPRKYNACFVASEGKLCHPEAMPYPFVIKTLLPNYREFDDTR 129 Query: 128 TFIS--------GYSNDPIVF--------RDIRLGILICEDIWKNSNICKHLK----KQG 167 F S G + ++ R ++G L+CED W ++ +K + Sbjct: 130 HFFSLQKLARELGTTPKSLISPVSLKIRGRRWKIGCLLCEDGWSDNYETAPMKLLEEYED 189 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG----GQDELIFDGASFCF 223 +F ++++SPY K +KR + + P+IYVN VG G+ FDGAS + Sbjct: 190 LDFYVNISSSPYTLGKDEKRRRLFSAAAKAAGTPLIYVNNVGLQNNGKTVYTFDGASAVY 249 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD----YNAC 279 + + E +Y+ + +++ E++ + Y A Sbjct: 250 SAEGLCVTAAPSYEEG--------------LHYIDVEEIASLPARTPEKKTEIAQIYEAL 295 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 +R+++ + KV++G SGGIDSA+ AA+ LG ENV + +P ++ S + + A Sbjct: 296 SYGVRNFLDSIDMKKVVVGASGGIDSAVAAALYTSVLGAENVLLVNMPSRFNSETTKDLA 355 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE----------EPSGIVAENIQSRIRGN 389 A AK LGC Y V PI + V H ++ E S +AENIQ+R R + Sbjct: 356 HALAKNLGCYYAVFPIEESVQHTMEQIAATPIELLKTGEKKTLAVSSFLAENIQARDRSS 415 Query: 390 -ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 IL AL+ +NK+E SVGY TLYGD +G L DL+K QV+ LA + N H Sbjct: 416 RILAALAAAFGGGFSCNANKAETSVGYSTLYGDQAGFLAALADLWKHQVYDLARYMNEHI 475 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESLPP--YPILDDIIKRIVENEESFIN 505 EV+P + ++ PSAEL Q D+ P YP D + + VE E Sbjct: 476 FKR------EVVPQATIDIVPSAELSDAQNVDEGKGDPLLYPYHDYLFRAFVERWEKATP 529 Query: 506 ND 507 D Sbjct: 530 ED 531 >gi|295106574|emb|CBL04117.1| NAD+ synthetase [Gordonibacter pamelaeae 7-10-1-b] Length = 272 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 93/225 (41%), Positives = 134/225 (59%), Gaps = 4/225 (1%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y CV +LR + + F +IGLSGG+DS++ A + VDA G ++V ++LP Y+S S Sbjct: 7 YRLCVEALRGFAEGAGFSDAVIGLSGGMDSSIVAVMCVDAFGADHVHGVLLPGPYSSEHS 66 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 +EDA A LG + V+ + + F ++++ E +G+ AEN Q+R R LMALS Sbjct: 67 VEDARELAGNLGIEAQVVSVCEPYEAFERVLARACGGELAGLAAENTQARCRMVCLMALS 126 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N ML+ T NKSE +GY TLYGD +G F PL LYKT V+ +A WRN+ +G P Sbjct: 127 NAYGWMLVNTGNKSEAMMGYSTLYGDTAGAFAPLGGLYKTDVYAVARWRNAQAEAAGAVP 186 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN 499 +P + K PSAEL P+Q D++S+ YP LD +++ VE Sbjct: 187 ---PVPERVFAKPPSAELSPNQEDEKSMGIDYPTLDALLQAHVER 228 >gi|330859232|emb|CBX69582.1| hypothetical protein YEW_DZ17170 [Yersinia enterocolitica W22703] Length = 193 Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 91/177 (51%), Positives = 128/177 (72%), Gaps = 10/177 (5%) Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYGDM+GGF+ LKD+ KT VF+ Sbjct: 21 ENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYGDMAGGFDVLKDVPKTLVFK 80 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVEN 499 L+ +RN+ ++ VIP ++ + PSAEL P Q D++SLPPY ILD I++ VE Sbjct: 81 LSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDEDSLPPYDILDAILEGYVEQ 131 Query: 500 EESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++S + E DET VR V L+ +EYKRRQ+ VG +ITA++FG+DR YPI++ F Sbjct: 132 DKSVADLVAEGFDETIVRKVIRLVDINEYKRRQSAVGPRITARNFGKDRRYPITSGF 188 >gi|108757841|ref|YP_634968.1| putative glutamine-dependent NAD+ synthetase [Myxococcus xanthus DK 1622] gi|27804867|gb|AAO22904.1| NH3-dependent NAD+ synthetase [Myxococcus xanthus] gi|108461721|gb|ABF86906.1| putative glutamine-dependent NAD+ synthetase [Myxococcus xanthus DK 1622] Length = 630 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 149/555 (26%), Positives = 233/555 (41%), Gaps = 75/555 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +K+ +A +N VG N KA + +G+ L +F E I+GYP ED+V + Sbjct: 1 MRLVKLGLASVNTTVGSFTRNTDKALALAGKMAAEGVTLGVFQEQLIAGYPAEDMVQWQG 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ ++ +T VVG Q LN ++ G I+ + K LP YS Sbjct: 61 FMDRQWPELERFARETAPLPTVFVVGVGVAHQGLRLNCAAVVAGGRILGLVPKEKLPTYS 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGIL------------ICEDIWKNSNICKHLKKQGAE 169 F+E RTF G V R + LG +CEDIW + GAE Sbjct: 121 VFYEARTFGRGQPGMAEVHRGVPLGDYLFHFDFGVVAPEVCEDIWSADGPMRRRTYSGAE 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L+ASP+ ++ R E++ + + I Y N VG D LIFDG F + + Sbjct: 181 LVVNLSASPFRLGFVETRRELIATRAADHQCTIAYSNAVGSNDGLIFDGGGFLNQNGRHV 240 Query: 230 AFQMKHFSE---------------QNFMTEWHYDQQ--------------LSQWNYMSDD 260 + F E + T W D++ +Q + D Sbjct: 241 -METPRFQEGYTAAVVDLDRTLRLRAEATTWRVDRESWLAQGGQAVPVLDCTQVVHTKRD 299 Query: 261 SAS-------TMYIPLQEE---------EADYNACVLSLRDYVQKNNFHKVI-IGLSGGI 303 + + + ++P + E +A L + DY +K KV+ I LSGG Sbjct: 300 ALTFPVPPHRSFFLPSPDTRRTARDALCEDILDALSLGVGDYFEKTRAFKVLGIALSGGR 359 Query: 304 DSALCAAIA---VDALGKEN----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 DS L IA EN +Q +P +Y+S + + A A+ LG + V+ I Sbjct: 360 DSLLTLLIAHRYAKRARPENPGSLIQAFYMPSRYSSDATRDAAETIARELGVAFQVVSID 419 Query: 357 DLVNHFFSLMSQFL-QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + ++ L ++ + I +NIQ+R+R + SN + L T N SE SVGY Sbjct: 420 EAFERERAVAKTMLGGKDVTPITEQNIQARLRAQRMWNWSNSCGGLFLQTGNMSEKSVGY 479 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T+ GD+ G + ++ KT V L + T+G + +V L K EL Sbjct: 480 TTIGGDLMGALAVIANVPKTVVMYLLDYLQD---TTGYEGIRKV-----LAKPAGPELAH 531 Query: 476 HQTDQESLPPYPILD 490 Q +E L P+PILD Sbjct: 532 DQVGEEELMPFPILD 546 >gi|257792558|ref|YP_003183164.1| NAD+ synthetase [Eggerthella lenta DSM 2243] gi|317488850|ref|ZP_07947380.1| NAD synthase [Eggerthella sp. 1_3_56FAA] gi|325832788|ref|ZP_08165551.1| NAD+ synthase [Eggerthella sp. HGA1] gi|257476455|gb|ACV56775.1| NAD+ synthetase [Eggerthella lenta DSM 2243] gi|316911924|gb|EFV33503.1| NAD synthase [Eggerthella sp. 1_3_56FAA] gi|325485927|gb|EGC88388.1| NAD+ synthase [Eggerthella sp. HGA1] Length = 280 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 99/250 (39%), Positives = 139/250 (55%), Gaps = 12/250 (4%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y CV +L+ ++ F V+IGLSGG+DS+L A + DALG + V +++P Y++ S Sbjct: 15 YRLCVNALKGFMDDAGFSDVVIGLSGGMDSSLVAVMCADALGADRVHGVLMPGPYSTDHS 74 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 ++DA A+ LG + + I + F + +++ + SG+ AEN Q+R R LMALS Sbjct: 75 VDDALDLARNLGIRTRTVSIAEPYRAFEAALAEACGGKLSGLAAENTQARCRMVCLMALS 134 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N ML+ T NKSE +GY TLYGD +G F P+ LYKT VF +A WRN +G P Sbjct: 135 NAYGWMLVNTGNKSEAMMGYSTLYGDTAGAFAPIGGLYKTDVFAVARWRNRQAEIAGEVP 194 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN--------EESFINN 506 IP + K PSAEL P Q D++S+ YP LD ++K V+ E F Sbjct: 195 ---PIPEHVFVKPPSAELSPDQEDEKSMGIDYPTLDRLLKAHVDRGLDAAALVSEGFDAA 251 Query: 507 DQEYNDETVR 516 D E TVR Sbjct: 252 DVERVLRTVR 261 >gi|257462842|ref|ZP_05627248.1| NAD synthetase [Fusobacterium sp. D12] gi|317060469|ref|ZP_07924954.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. D12] gi|313686145|gb|EFS22980.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. D12] Length = 259 Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/269 (38%), Positives = 157/269 (58%), Gaps = 23/269 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ VQ+ F KVI+GLSGGIDSAL A +AV ALGKENV T+ +PYK +S +S+E A Sbjct: 12 IQEQVQQAGFQKVILGLSGGIDSALVAYLAVKALGKENVLTVKMPYKTSSKESIEHANLV 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + LG + + I +V+ +FS +Q E + + N +R R IL S A++ Sbjct: 72 LRDLGLQEKTIEITPMVDAYFS-----MQAEATSLRRGNYMARTRMAILFDQSALENALV 126 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+EI +GYGTL+GDM+ FNP+ D+YK V++L+ + +P Sbjct: 127 IGTSNKTEILLGYGTLFGDMACAFNPIGDIYKKDVWELSRYMG--------------VPQ 172 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEH 520 I++K PSA+L QTD+E L Y + D+I++R V+ ++S E Y + V+ V Sbjct: 173 EIIDKQPSADLWEGQTDEEELGLSYQLADEILERFVDKKQSLEEMLAEGYEEIVVQKVIQ 232 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + S YKR+ P+ K+ A GRD ++ Sbjct: 233 KVKASSYKRKLNPIA-KVGA-VLGRDFIF 259 >gi|223985929|ref|ZP_03635965.1| hypothetical protein HOLDEFILI_03271 [Holdemania filiformis DSM 12042] gi|223962116|gb|EEF66592.1| hypothetical protein HOLDEFILI_03271 [Holdemania filiformis DSM 12042] Length = 625 Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 171/626 (27%), Positives = 277/626 (44%), Gaps = 113/626 (18%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q+N G N+A R +A + DLI+F E+ +SGY +D + + Sbjct: 1 MKIALGQINVKQGQPTENLAAMREMIVQAKAEKADLIVFPEMALSGYCLQDKWLDQDWCA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG----FP-RQDQEGVLNSVVILDAGNIIA-----VRDK 114 S D L + + G GI+ G P Q Q G V +A A R+ Sbjct: 61 YLESLNDELLALSQ--GIGILYGNLGTRPIGQAQRGRDGRPVRYNAAYFCADGQWVKREN 118 Query: 115 INL---------PNYSEFHEKRTFISGY------------SNDPIVF----RDIRLGILI 149 +L P+Y F + R F+SG P +F + R+G+ I Sbjct: 119 SSLDGMYIKHLNPDYRVFDDSRYFLSGMEIAMRNQTPVEEGLRPFLFEKDGKTWRIGVEI 178 Query: 150 CEDIWKNS---NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVH---LPII 203 CED+W ++ KQ + + +L+ SP+ NK + R + V + +P++ Sbjct: 179 CEDLWSEDYALDVTDAYLKQDVDLIVNLSCSPWTLNKERSRDKRVRQHAASAQGAFVPLV 238 Query: 204 YVNQVG----GQDELIFDGASFCFD--GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM 257 YVN G G++ ++FDG S +D G++QL+ F + + H + L++ Sbjct: 239 YVNACGMQNNGKNVMVFDGDSTIYDEQGERQLSLN-DQFEPECRIVGLHEREVLTR---- 293 Query: 258 SDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH---KVIIGLSGGIDSALCAAIAVD 314 Q E A V ++R++ K F K I+GLSGG+DS++ +A+ V Sbjct: 294 ------------QPETKLMRALVSAIREF-DKQMFSPKMKWIVGLSGGLDSSITSALLVY 340 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 ALG + V + +Y S + +A A A+ LG I +V+ + + + Sbjct: 341 ALGAQRVVGYNMASRYNSLTTKNNAKALAERLGILIREGSIEKIVDATVDTLQDYGYPQA 400 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 G+ ENIQ+R+RG++L + ++ +++ NK E ++GY TLYGD G +P+ D K Sbjct: 401 EGLALENIQARLRGHLLSSFASMEGGVIVNNGNKVEAALGYCTLYGDAIGALSPIADCTK 460 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSIL----------EKSPSAELRPHQTDQ---- 480 Q+F LA I + G E+IP ++L E PSAEL+ Q D Sbjct: 461 VQLFDLA-----KQINAAFG--REIIPANLLPEMDGDRLIWEFPPSAELKDDQRDPMKWF 513 Query: 481 ------ESLPPYP------ILDDIIKRIVENEESFINNDQEYN--DETVRYVEHL----- 521 L YP I+DD ++ ++ E I Y DE +V+ L Sbjct: 514 YHDWLINQLTEYPGGRVEEIMDDYLQGRLQTSE--IGRWLRYYGLDEPQAFVQDLEWVLR 571 Query: 522 -LYGSEYKRRQAPVGTKITAKSFGRD 546 + G+ +KR Q P I+ +FG D Sbjct: 572 TMQGAVFKRIQFPPLILISRGAFGSD 597 >gi|256827581|ref|YP_003151540.1| NAD+ synthetase [Cryptobacterium curtum DSM 15641] gi|256583724|gb|ACU94858.1| NAD+ synthetase [Cryptobacterium curtum DSM 15641] Length = 276 Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 131/224 (58%), Gaps = 4/224 (1%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y+ CV +LR + + F + +IGLSGGIDSALCA + VDA G +V ++LP Y+S S Sbjct: 7 YDTCVAALRTFAHQAGFTECVIGLSGGIDSALCAVLCVDAFGASSVHGVLLPGPYSSAHS 66 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 +EDA A+ LG Y VL I + F L+++ + + ++N Q+R R LMALS Sbjct: 67 VEDAEDEARTLGIDYQVLSIVEPYQAFAELLAEPCGKAWDNLPSQNTQARCRMVCLMALS 126 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N ML+ T NKSE +GY TLYGD +G F P+ LYKT V+ L+ RN +G Sbjct: 127 NAHGWMLVNTGNKSEAMMGYSTLYGDTAGAFAPIGGLYKTDVYTLSRARNERARAAG--- 183 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE 498 L E IP +L K PSAEL P Q D+ SL Y LD I+ R E Sbjct: 184 LPEPIPTRVLVKPPSAELAPGQEDESSLGIDYATLDAILIRYFE 227 >gi|258645791|ref|ZP_05733260.1| putative NAD+ synthetase [Dialister invisus DSM 15470] gi|260403162|gb|EEW96709.1| putative NAD+ synthetase [Dialister invisus DSM 15470] Length = 626 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 143/522 (27%), Positives = 244/522 (46%), Gaps = 70/522 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I+ QL+ + G+I N + R + A +Q D+++F EL +SGY DL + +F++ Sbjct: 2 IRISTVQLSVIPGNIRANFEQMEREIQNARKQNTDILIFPELCLSGYMIGDLWEQNAFLR 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF-------PRQDQEGVL---NSVVILDAGNII----- 109 C + D I+V F +++ +G + N+ G + Sbjct: 62 EC----ERYGQKIADAAENIIVIFGNIAVDPKKKNNDGRVRKYNAAFAACNGQFLKNDRG 117 Query: 110 -AVRDKINLPNYSEFHEKRTFIS-----GYSND-------PIVF----RDIRLGILICED 152 + K LP+Y +F +KR F S N P F +R GI++CED Sbjct: 118 LSYTIKTLLPDYRQFDDKRHFTSLPELAAEENQSVSSLLAPFTFTIRQETLRAGIVLCED 177 Query: 153 IW-KNSNICKH--LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 W +N+ + L ++ + LF+L+ASP+ K KRH + + +S + P++Y+N+ G Sbjct: 178 SWDENARLSPMEILSEKNIDILFNLSASPFTLEKNDKRHRLFSASLSRLGCPMLYINRRG 237 Query: 210 ----GQDELIFDGASFCFDGQQQL-AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST 264 G+D +DG + +D + L A + + +E++ + ++L+ M Sbjct: 238 LENNGKDCYTYDGMTAAYDPKGTLLAEAVPYQAERSCFSFDIAAKKLTAEKEMKPFRGD- 296 Query: 265 MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 M +P A L++++ + +V+IG+SGGIDSA+ AA+ L EN+ + Sbjct: 297 MLLP---------ALRYGLKEFLSAIHAGRVVIGISGGIDSAVNAALYRSVLPAENLLLV 347 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM--------SQFLQEEPSG 376 P ++ S + A A+ L + LPI +N S + S +G Sbjct: 348 NTPTRFNSETTKNLARRLAENLEAPFVELPIDSFINETVSQIDDLQIPSSSDMKTLHLTG 407 Query: 377 IVAENIQSRIRGN-ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 + ENIQ+R R IL LS+ + +NK+E++VGYGTLYGD+SG DL+K Sbjct: 408 FMKENIQARDRSTRILATLSSAFGGIFTCNANKTELTVGYGTLYGDLSGALAATADLWKH 467 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 Q++ L N + + +IP I PSAEL +Q Sbjct: 468 QIYALGRTLNRYFDKN-------MIPDEIFTVRPSAELSENQ 502 >gi|147677253|ref|YP_001211468.1| hypothetical protein PTH_0918 [Pelotomaculum thermopropionicum SI] gi|146273350|dbj|BAF59099.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 635 Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 155/550 (28%), Positives = 251/550 (45%), Gaps = 74/550 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKIA+ Q+ V G N + EA R+ +I+F EL I GY D +++F++ Sbjct: 2 LKIALGQMEVVPGRPDINTSTMLDMIAEARRKKAKMIIFPELAIPGYLLGDTWEQQAFLR 61 Query: 65 ACSSAIDTLKSDTHD-----GGAGIVVGFPRQD-QEGVLNSVVILDAGNIIA-------V 111 C + + D G G+ G D + N+ I G + Sbjct: 62 DCEECGRRIIEASEDICVLFGNVGVDWGKTGDDGRVRRYNAFFIAHNGRLCGGENFPYPF 121 Query: 112 RDKINLPNYSEFHEKRTFIS--------GYSNDPI---VFRD-----IRLGILICEDIWK 155 R K PNY EF + R F S G S + + VF + ++LG ++CED W Sbjct: 122 RIKTLNPNYREFDDTRYFYSLRKLAPELGKSVEDLLRPVFLNLDGETVKLGCMLCEDGWS 181 Query: 156 NSNICKHL----KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-- 209 + K + + A+ ++++SP+ K KR+ + + Q+ +P+IYVN VG Sbjct: 182 DDYSVKPMAAINRNGPADLFINISSSPFTLGKNNKRNRVFSRQVRETGVPLIYVNNVGIQ 241 Query: 210 --GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI 267 G+ FDG S ++G+ + F+ + + ++ Q+ ++ + I Sbjct: 242 NNGKTVYTFDGYSTVYNGRGEAVGYCHPFTAELKIVDFDLAQK--------GENLPPVSI 293 Query: 268 PLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P ++ Y A L +++ +V+IG+SGGIDSA+ A + L ENV + + Sbjct: 294 PDDRGIDSIYQALRYGLSKFLRSIGMDRVVIGVSGGIDSAVSACLYTQVLDPENVLLVNM 353 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP------------ 374 P + S + + A + LG Y V+PI V+ L ++ + E P Sbjct: 354 PSIFNSQTTRDLAYKLSSNLGSLYCVVPIQSAVD----LTARQISETPVLNLKDGSKFYL 409 Query: 375 --SGIVAENIQSRIRGNILMALSNHSKAMLLTT-SNKSEISVGYGTLYGDMSGGFNPLKD 431 S V ENIQ+R R + ++A + T +NKSE++VGY TLYGD +G L D Sbjct: 410 SVSSFVLENIQARDRSSRVLAGLAAAFGGGFTCNANKSELTVGYCTLYGDEAGFLAALAD 469 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESLPP--YPI 488 L+K QV++LA + N + T+VIP I++ PSAEL P Q D+ P YP Sbjct: 470 LWKHQVYELAEYLNKYVYG------TDVIPQEIIDLVPSAELSPDQAVDEGKGDPIIYPY 523 Query: 489 LDDIIKRIVE 498 D + + +E Sbjct: 524 HDYLFRAFME 533 >gi|218288869|ref|ZP_03493120.1| NAD+ synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218240958|gb|EED08135.1| NAD+ synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 283 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 105/271 (38%), Positives = 160/271 (59%), Gaps = 21/271 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LRD V K F K + GLSGGIDSAL A +A +ALG++ V +++PY+ +SP+SLEDA Sbjct: 24 LRDEVTKVGFQKAVFGLSGGIDSALTAFLAAEALGRDRVHAVLMPYRTSSPKSLEDALKV 83 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 +ALG + V+ I V+ +F+ + + L E + + N +R R L LS A++ Sbjct: 84 VEALGIPHTVIDITAPVDAYFAQVDRVLGYEANALRRGNRMARERMVTLYDLSAAMNALV 143 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGT +GDM+ NP+ DLYK QV QLA +H LG +P Sbjct: 144 LGTSNKTELLLGYGTQFGDMASALNPIGDLYKCQVRQLA----AH-----LG-----VPR 189 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETVRYV 518 SILEK+PSA+L QTD++ L Y D+I+ + V+ + + ++ + Y + VR + Sbjct: 190 SILEKAPSADLWADQTDEKELGFSYDEADEILYQWVDLRMSPDEIVS--RGYPERLVRAI 247 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + ++YKRR P+ K++ ++ G D Y Sbjct: 248 VERVRRNQYKRRM-PIIAKLSGRTIGLDFRY 277 >gi|258512082|ref|YP_003185516.1| NAD+ synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478808|gb|ACV59127.1| NAD+ synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 283 Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 104/271 (38%), Positives = 159/271 (58%), Gaps = 21/271 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LRD V K F K + GLSGGIDSAL A +A +ALG++ V +++PY+ ++PQSLEDA Sbjct: 24 LRDEVTKVGFQKAVFGLSGGIDSALTAFLAAEALGRDRVHAVLMPYRTSNPQSLEDALKV 83 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 +ALG + ++ I V+ +F + + L E + + N +R R L LS A++ Sbjct: 84 VEALGIPHTIIDITAPVDAYFEQVDRVLGYEANALRRGNRMARERMVTLYDLSAAMNALV 143 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGT +GDM+ NP+ DLYK QV QLA +H LG +P Sbjct: 144 LGTSNKTELLLGYGTQFGDMASALNPIGDLYKCQVRQLA----AH-----LG-----VPR 189 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETVRYV 518 SILEK+PSA+L QTD++ L Y D+I+ + V+ + + ++ + Y + VR + Sbjct: 190 SILEKAPSADLWADQTDEKELGFSYDEADEILYQWVDLRMSPDEIVS--RGYPERLVRAI 247 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + ++YKRR P+ K++ ++ G D Y Sbjct: 248 VERVRRNQYKRRM-PIIAKLSGRTIGLDFRY 277 >gi|323343215|ref|ZP_08083446.1| hypothetical protein HMPREF0357_11627 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463279|gb|EFY08474.1| hypothetical protein HMPREF0357_11627 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 584 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 138/499 (27%), Positives = 234/499 (46%), Gaps = 49/499 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQL + N + E++ + DLI+F EL + GY D + +S I Sbjct: 1 MKIAIAQLRVKANNPQANFEMIQEIVEKSKGKA-DLIVFPELAVGGYLVGDRMNNQSNID 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNII--------AVRDKIN 116 + D ++ + + GIV G Q + + N+ G + V K Sbjct: 60 ELMAYNDRIRLLSDE--IGIVWGNIYQKNDRLYNAAFFAYKGEWVERANHESAGVYMKHL 117 Query: 117 LPNYSEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKH---LKKQGAEFLF 172 LPNY F +KR F G N +P +F+ R+ I +CED+W S+ K + + + + Sbjct: 118 LPNYGIFDDKRYFEPGDHNFEPFIFKGDRISIQVCEDLWDKSSDLKPTELMMQHSPDLMI 177 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG----GQDELIFDGASFCFDGQQQ 228 +++ SP++ +K R E + Q ++ +P IYVN G G++ ++FDG S + Sbjct: 178 NISCSPWHKHKESMRLEEIRRQ--NLDIPFIYVNATGMQNNGKNVVLFDGGSMVVSSESV 235 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 + D Q + D P E++ Y+A + ++R + + Sbjct: 236 T----------------YLDANFKQTFDIVDLKVQVTNKPSYEDKM-YHALISAIRYFDE 278 Query: 289 KNNFH--KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 + + K I+G+SGG+DS++ A+ V ALGK+ V + +P ++ + +A +K L Sbjct: 279 EALSYGPKWIVGVSGGLDSSVSIALLVKALGKDRVVGVTMPSQFNRDITKNNAYHLSKVL 338 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G K+ +PI + + M + +G+ EN+Q+R+RG+ LM +S+ +++ Sbjct: 339 GFKFLEIPIAAMTDATVESMKFGAYSDVTGLAFENVQARLRGHTLMTVSSLENGVVMNNG 398 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NK E+++GY TLYGD G L DL K +V + N G + E + P LE Sbjct: 399 NKIEVALGYATLYGDAIGALAILGDLTKMEVGMIGRTLNR---IEGQEIVPENLIPVELE 455 Query: 467 K------SPSAELRPHQTD 479 +PSAEL Q D Sbjct: 456 NRVDWEFAPSAELAQDQFD 474 >gi|258593162|emb|CBE69483.1| NH(3)-dependent NAD(+) synthetase [NC10 bacterium 'Dutch sediment'] Length = 273 Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 104/266 (39%), Positives = 147/266 (55%), Gaps = 22/266 (8%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 VQK F +V+IGLSGG+DSAL A + ALG ENV +++PYK +SP+S E A K L Sbjct: 23 VQKAGFSRVVIGLSGGVDSALSAYLGAKALGAENVWALLMPYKTSSPESREHAELVVKQL 82 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 + DV+ I +V+ +F E + N +R R IL S KA++L TS Sbjct: 83 RIQSDVIDITPMVDAYFERFP-----ESDHVRRGNKMARERMTILFDHSAKLKALVLGTS 137 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NK+E+ +GYGTLYGDM+ NPL DLYKTQV QLA + IP +I++ Sbjct: 138 NKTELLLGYGTLYGDMASAINPLGDLYKTQVRQLACYMG--------------IPEAIVQ 183 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYG 524 K+PS +L QTD+ L Y +D ++ +V+ +++ VR V + Sbjct: 184 KAPSGDLWVGQTDEAELGFSYEEVDRVLNLMVDRRYEIPEIIAAGFDERFVRAVLAKVQA 243 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYP 550 S+YKRR P+ KI+A++ RD YP Sbjct: 244 SQYKRR-PPLIAKISARTIDRDFRYP 268 >gi|323142171|ref|ZP_08077008.1| NAD+ synthase [Phascolarctobacterium sp. YIT 12067] gi|322413363|gb|EFY04245.1| NAD+ synthase [Phascolarctobacterium sp. YIT 12067] Length = 457 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 115/376 (30%), Positives = 184/376 (48%), Gaps = 41/376 (10%) Query: 148 LICEDIWKNS---NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIY 204 ++CED W + N+ + L GA+ L +L+ SPY K +KR+ + + Q +P+IY Sbjct: 1 MLCEDGWTENYHLNVPQTLAANGAQLLCNLSCSPYTLGKNRKRNRLFSAQARTAGIPLIY 60 Query: 205 VNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD 260 N VG G++ +DG + ++G L +++ E+ +D ++++ Sbjct: 61 CNNVGIQNNGKNIFTYDGCTSAYNGDGSLVTSAPMYADT--FLEFTWDTKVNR----IIP 114 Query: 261 SASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN 320 + +P QE E+ Y A ++Q+ ++ +GLSGGIDSA+ A + D LG EN Sbjct: 115 TCPPAELP-QEPESVYRALRYGTAKFLQQCGIKRMTVGLSGGIDSAVTAVMYADILGPEN 173 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP------ 374 V + LP ++ S + A A+ALG Y V+PI + + L + L+E P Sbjct: 174 VLLLNLPSRFNSAATRNSAQQLAQALGANYAVMPISE----SYELTVKQLEETPITNLAD 229 Query: 375 --------SGIVAENIQSRIRG-NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 SG++ ENIQ+R RG ++ A S SNK+E+++GY T YGD+ G Sbjct: 230 GSSFNLQLSGLIKENIQARDRGARVIAAASAAFGGAFSCNSNKAELAIGYATFYGDICGA 289 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 + DL+K QV+ L + N EVIP +I PSAEL QT P Sbjct: 290 MAMIGDLWKHQVYALGHYLNEVIYKR------EVIPEAIFNIRPSAELSDAQTVGNGGDP 343 Query: 486 --YPILDDIIKRIVEN 499 Y D +++ +EN Sbjct: 344 LVYGYHDYLLRAFIEN 359 >gi|227824732|ref|ZP_03989564.1| NAD+ synthetase [Acidaminococcus sp. D21] gi|226905231|gb|EEH91149.1| NAD+ synthetase [Acidaminococcus sp. D21] Length = 490 Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 121/383 (31%), Positives = 185/383 (48%), Gaps = 41/383 (10%) Query: 141 RDIRLGILICEDIWKNS---NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 ++++LG+ ICED W + N+ + L K GA+ L +++ SP+ K +KR E+ Q Sbjct: 27 KEVKLGVFICEDGWTENYDFNVPQILTKNGAQLLINISCSPFTLQKNRKRGELFKKQARD 86 Query: 198 VHLPIIYVNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ 253 LP++Y N VG G++ FDG S + + + F E+ F+T +D + Sbjct: 87 CGLPLLYCNGVGIQNNGKNIFTFDGCSTFYTKEGNVLCDAPSF-EEAFLTG-SFDTETGA 144 Query: 254 WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 + S T++ + E E Y++ ++ + K+ IGLSGGIDSA+ AA V Sbjct: 145 LS-----STGTVHPKMTEIEEIYHSLYYGASKFLDQLGIRKMTIGLSGGIDSAVTAAFYV 199 Query: 314 DALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 LG ENV + LP ++ S + A A+ALG Y V+PI + V SL + LQ Sbjct: 200 HILGPENVLLLNLPSRFNSSLTKGLAQKMAEALGTHYAVIPIEESV----SLTEKQLQSA 255 Query: 374 P--------------SGIVAENIQSRIRG-NILMALSNHSKAMLLTTSNKSEISVGYGTL 418 S ENIQ+R RG ++ +++ SNKSE++VGY T Sbjct: 256 TIHDYGTGKDETLSVSSFALENIQARDRGARVIAGMASLWGGGFSCNSNKSEMTVGYATF 315 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD++G + DL+K QV+ L + N +VIP + PSAEL QT Sbjct: 316 YGDIAGVMALIGDLWKHQVYALGRYLNEQVYHK------DVIPDEVFTIKPSAELSQKQT 369 Query: 479 DQESLPP--YPILDDIIKRIVEN 499 P YP D + + VE+ Sbjct: 370 VGTGGDPLHYPYHDYLFRAFVES 392 >gi|269217228|ref|ZP_06161082.1| NAD+ synthetase [Slackia exigua ATCC 700122] gi|269129365|gb|EEZ60450.1| NAD+ synthetase [Slackia exigua ATCC 700122] Length = 268 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/224 (39%), Positives = 133/224 (59%), Gaps = 4/224 (1%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 + CV +LRD+ ++ + V+IGLSGGIDS+L A + D G E+V +++P Y++ S Sbjct: 7 HRVCVDALRDFAEETSATDVVIGLSGGIDSSLVACLCCDVFGSEHVHGVLMPGPYSTSHS 66 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L DA A+ALG + + I++ F ++S+ + G+ AEN Q+R R ILMA+S Sbjct: 67 LIDAQELARALGIETQQISINEPFQAFGRILSEHMGGF-GGVAAENTQARCRMIILMAIS 125 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N + +++ T N+SE +GY TLYGD G F P+ LYKT VF + + N SG Sbjct: 126 NMTGWLVVNTGNRSEAMMGYSTLYGDTVGAFAPIGGLYKTDVFAASRFVNEQAEASG--- 182 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVEN 499 L IP ++L K PSAEL P Q D+++L Y LD ++ +E+ Sbjct: 183 LAAPIPENVLIKPPSAELAPDQRDEDALGAYETLDAMLIEHIEH 226 >gi|124009585|ref|ZP_01694259.1| NH(3)-dependent NAD(+) synthetase [Microscilla marina ATCC 23134] gi|123984824|gb|EAY24799.1| NH(3)-dependent NAD(+) synthetase [Microscilla marina ATCC 23134] Length = 673 Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 161/599 (26%), Positives = 254/599 (42%), Gaps = 102/599 (17%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +K+A A LN D N A A QG+ L+ EL I+GY ED + + Sbjct: 1 MQLIKVAAAILNQTPLDWEQNTQNIIEAINNARNQGVSLLCLPELCITGYGCEDAFYAPN 60 Query: 62 FIQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 C+ A++ L K H G + VG P Q + N+ ++ G + K L Sbjct: 61 ---TCAQALEVLVKILPHTQGMVVSVGLPLFVQNQLFNTACLIVNGKVAGFVAKKFLAGQ 117 Query: 121 SEFHEKRTFISGYSNDPI-----------------VFRDI---RLGILICEDIWKNSNIC 160 +E+R F + S + V+ DI ++G ICED W + Sbjct: 118 GIHYEQRWFKAWKSGEITTIQLPEMLGGAEVKVGDVYFDIGGVKIGYEICEDAWVANRPG 177 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGA 219 + L K G + L + +AS + KL+ R V + IY N +G + I+DG Sbjct: 178 RDLYKYGIDILLNPSASHFAFGKLEIRKRFVLEGSRAFGVSYIYANLLGNEAGRAIYDGG 237 Query: 220 SFCFDGQQQLAFQMKHFSEQNF-MTEWHYDQQLS---------------------QWNYM 257 + + +A K FS N+ +T D +L+ Q ++ Sbjct: 238 ALVATNGEMIA-TGKRFSYANWEVTTTTIDIELTRLAQIQNQIPFDTADDYRHRVQCDFT 296 Query: 258 SDDSASTM---------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + A + P +EE A L+L DY++K+ ++ LSGG DSA Sbjct: 297 YPECAPMLPHLEQEAWEKSPFIKEEEFSRAVSLALFDYMRKSFSRGFVVSLSGGADSAAV 356 Query: 309 AAIA--VDALGKENV-------------------------------QTIMLPYKYTSPQ- 334 AA+ + LG ENV Q I Y+ T Sbjct: 357 AALCYLLIELGIENVGATYFLNKLGHVKALAQLDQSSANLPHQIAQQLITCAYQATRNSG 416 Query: 335 --SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF----LQEEPSGIVAENIQSRIRG 388 +L AA AK +G ++ L + L ++ S++S+ L E I +NIQ+R+R Sbjct: 417 KVTLNAAAKLAKGIGSEFHELDVEPLRENYVSMVSKAIGRPLTWEQDDITLQNIQARLRS 476 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +N A+LL+TSN+SE +VGY T+ GD SGG +P+ + K + Q W + G Sbjct: 477 PGIWMFANLKGALLLSTSNRSEAAVGYATMDGDTSGGVSPIAGIDKAFLRQWLRWLQNDG 536 Query: 449 ITSGLGPLTEVIPPSIL--EKSPSAELRP---HQTDQESLPPYPILDDIIKRIVENEES 502 +T +P L + P+AELRP HQTD+ L PY +LDDI + + ++ + Sbjct: 537 LTLATPDQKLTLPALELVNNQQPTAELRPQDSHQTDEGDLMPYDLLDDIEEHAIRDKRT 595 >gi|162457292|ref|YP_001619659.1| putative NAD synthetase [Sorangium cellulosum 'So ce 56'] gi|161167874|emb|CAN99179.1| Putative NAD synthetase [Sorangium cellulosum 'So ce 56'] Length = 639 Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 136/565 (24%), Positives = 229/565 (40%), Gaps = 85/565 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +KI IA +N VG + N + R + L +F E I GY EDLV + Sbjct: 1 MRLVKIGIANVNATVGAVRSNTDRCLSLARAMARDDVTLAVFPEQVIGGYAAEDLVQWPA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ + + +T ++G + N+ I+ AG ++A K LP Y+ Sbjct: 61 FVASQQRELRRFAEETAQLRTVFIIGVTVGVGGDLFNAGAIVHAGRVLAFSPKEKLPTYN 120 Query: 122 EFHEKRTFISGY-----------SNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAE 169 F+E RTF G D + D + + +CEDIW + GAE Sbjct: 121 IFYEARTFSRGMPLMELDADGVLCGDRVYAFDFGTIAVEVCEDIWSPDGPMRRRCYAGAE 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +++ASP+ R E++ + + + Y N VGG D L+FDG F + + Sbjct: 181 IVCNISASPFRAGVTGTRREMIATRAADNQCTVAYANLVGGNDGLVFDGGGFINQNGRPM 240 Query: 230 AFQMKHFSE---------------QNFMTEWHYDQQ---------------------LSQ 253 + F E + + W D + ++ Sbjct: 241 -LEAPRFREGFSAAVVDLDRTTRCRREASTWRSDLEEFRRASARMVQVLRIDGETADRAR 299 Query: 254 WNYMSDDSASTMYIP--------LQEEEAD--YNACVLSLRDYVQK-NNFHKVIIGLSGG 302 Y + + +T ++P ++E D Y A L + DY +K F + + LSGG Sbjct: 300 LAYPAPPAGTTPFLPSAALPAISARDELLDDFYEALALGVADYYRKIGAFKSIGLALSGG 359 Query: 303 IDSALCAAIAVDALG---------------KENVQTIMLPYKYTSPQSLEDAAACAKALG 347 DS L +A A+ + ++ +P +Y+S + AA A LG Sbjct: 360 RDSLLTLLVAWRAVQLIHPGLEGAALRERMRASLHAFFMPSRYSSDATHRAAAQIADDLG 419 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 + V+PI D + E + + + +N+Q+RIRG + +N S A+ L T Sbjct: 420 VSFAVIPIEDAFPRELEAAQAMVGEGGQLTELTKQNVQARIRGGRMWNWANTSGALFLQT 479 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 N SE ++GY T+ GD+ G F+ + +L KT V L + G+ L Sbjct: 480 GNMSEKALGYTTVGGDLEGAFSVIANLPKTVVIALLERLSQRFRFQGI--------QQTL 531 Query: 466 EKSPSAELRPHQTDQESLPPYPILD 490 + EL +Q+ + L P+ +LD Sbjct: 532 ATTAGPELAENQSGEAELMPFEVLD 556 >gi|257453148|ref|ZP_05618447.1| NAD synthetase [Fusobacterium sp. 3_1_5R] gi|317059683|ref|ZP_07924168.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 3_1_5R] gi|313685359|gb|EFS22194.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 3_1_5R] Length = 259 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 99/266 (37%), Positives = 147/266 (55%), Gaps = 23/266 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ F KVI+GLSGGIDSAL A +AV ALGKENV I +PYK +S +S+E A Sbjct: 12 IQEQVKNAGFKKVILGLSGGIDSALVAYLAVKALGKENVIAIKMPYKTSSQESIEHANLV 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 K LG + + I +V+ +F+ Q E S + N +R R +L S A++ Sbjct: 72 LKDLGLEDRTIEITPMVDAYFT-----NQAEASSLRRGNYMARTRMTVLFDQSALENALV 126 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+EI +GYGTL+GDM+ FNP+ D+YK V+ L+ + +P Sbjct: 127 IGTSNKTEILLGYGTLFGDMACSFNPIGDIYKKDVWSLSRYMG--------------VPK 172 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 I+EK PSA+L QTD++ L Y D+I++R+V+ ++S Y + V V Sbjct: 173 EIIEKQPSADLWAGQTDEQELGLSYKEADEILERLVDKKQSLEEIVAAGYEEGIVNKVIQ 232 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRD 546 + S YKR+ P+ + GRD Sbjct: 233 KVKASAYKRKLNPIAK--VGEVLGRD 256 >gi|294782577|ref|ZP_06747903.1| NAD+ synthetase [Fusobacterium sp. 1_1_41FAA] gi|294481218|gb|EFG28993.1| NAD+ synthetase [Fusobacterium sp. 1_1_41FAA] Length = 258 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 148/260 (56%), Gaps = 26/260 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L++ +KN F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P SL A Sbjct: 19 LKENFKKNGFSKAVLGLSGGIDSALAAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + LG V+ I D+++ +F +++P+ + N +R R +IL S+ A++ Sbjct: 79 VEDLGIDSKVIEITDMIDAYFK-----NEKDPTSLRMGNKMARERMSILYDYSSKENALV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+EI +GY T +GD + FNP+ DLYKT V++L+ + N IP Sbjct: 134 VGTSNKTEIYLGYSTQFGDAACAFNPIGDLYKTNVWELSRYLN--------------IPK 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE---ESFINNDQEYNDETVRYV 518 ++EK PSA+L QTD++ + Y D ++ R++E E +N + ++ V + Sbjct: 180 ELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKTVEEILN--EGFDKSLVENI 237 Query: 519 EHLLYGSEYKRRQAPVGTKI 538 + SEYKRR P+ KI Sbjct: 238 VRRMNRSEYKRRM-PLIAKI 256 >gi|262068274|ref|ZP_06027886.1| NAD+ synthetase [Fusobacterium periodonticum ATCC 33693] gi|291378012|gb|EFE85530.1| NAD+ synthetase [Fusobacterium periodonticum ATCC 33693] Length = 258 Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 148/260 (56%), Gaps = 26/260 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L++ +KN F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P SL A Sbjct: 19 LKENFKKNGFSKAVLGLSGGIDSALAAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + LG V+ I D+++ +F +++P+ + N +R R +IL S+ A++ Sbjct: 79 VEDLGINSKVIEITDMIDAYFK-----NEKDPTSLRMGNKMARERMSILYDYSSKENALV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+EI +GY T +GD + FNP+ DLYKT V++L+ + N IP Sbjct: 134 IGTSNKTEIYLGYSTQFGDSACAFNPIGDLYKTNVWELSRYLN--------------IPK 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE---ESFINNDQEYNDETVRYV 518 ++EK PSA+L QTD++ + Y D ++ R++E E +N + ++ V + Sbjct: 180 ELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKTVEEILN--EGFDKSLVENI 237 Query: 519 EHLLYGSEYKRRQAPVGTKI 538 + SEYKRR P+ KI Sbjct: 238 VRRMNRSEYKRRM-PLIAKI 256 >gi|297180987|gb|ADI17189.1| predicted amidohydrolase [uncultured Rhodobacterales bacterium HF0070_10D05] Length = 214 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/216 (42%), Positives = 123/216 (56%), Gaps = 2/216 (0%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KK +I +AQLNP VGD+ GN A A E+A + G DLI FTELFI+GY +DL+ K Sbjct: 1 MAKKFQITLAQLNPTVGDLEGNYKVAFEAWEQAQKMGSDLIAFTELFITGYNTQDLIKKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 SF +A I L G A I +G P ++ + N+ IL GNI V K +LPN Sbjct: 61 SFFKAAQDQILQLAKACRKGPA-IAIGGPAYIEDKLYNAYYILADGNIANVIMKHHLPNQ 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F EKR F G + P IR+G ICED W +S++ + L + GA+ L N SPYY Sbjct: 120 NVFDEKRIFDEGEISGPYQIGPIRIGSPICEDAW-HSDVSETLSETGAQVLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 + K R + ++ +LP+IY+N VG QD+ F Sbjct: 179 NGKNDVRLNKMVARVVETNLPLIYLNMVGAQDDQSF 214 >gi|237740329|ref|ZP_04570810.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 2_1_31] gi|229422346|gb|EEO37393.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 2_1_31] Length = 258 Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 147/260 (56%), Gaps = 26/260 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L++ +KN F K I+GLSGGIDSAL A + DALGKENV IM+PYK ++P SL A Sbjct: 19 LKENFKKNGFSKAILGLSGGIDSALAAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + LG V+ I D+++ +F +++ + + N +R R +IL S+ A++ Sbjct: 79 VEDLGINSKVIEITDMIDAYFK-----NEKDSTSLRMGNKMARERMSILYDYSSKENALV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+EI +GY T +GD + FNP+ DLYKT V++L+ + N IP Sbjct: 134 IGTSNKTEIYLGYSTQFGDSACAFNPIGDLYKTNVWELSRYLN--------------IPK 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE---ESFINNDQEYNDETVRYV 518 ++EK PSA+L QTD++ + Y D ++ R++E E +N + ++ V + Sbjct: 180 ELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKTVEEILN--EGFDKSLVENI 237 Query: 519 EHLLYGSEYKRRQAPVGTKI 538 + SEYKRR P+ KI Sbjct: 238 VRRMNRSEYKRRM-PLIAKI 256 >gi|218782772|ref|YP_002434090.1| NAD+ synthetase [Desulfatibacillum alkenivorans AK-01] gi|218764156|gb|ACL06622.1| NAD+ synthetase [Desulfatibacillum alkenivorans AK-01] Length = 664 Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 164/630 (26%), Positives = 261/630 (41%), Gaps = 109/630 (17%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++IA A LN D GN+A+ R+A A G + +L EL I+GY ED F Sbjct: 1 MKIIRIAAASLNQTPLDWKGNMARIRQAVSLAEEAGANFLLLPELCITGYGCED-AFSAH 59 Query: 62 FIQACSSA-IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ CS + L +T + ++VG P ++ V N +L G ++ + K +L Sbjct: 60 FVIDCSHRFLVALARETPN--MAVIVGLPVLHRKAVYNCAAVLAGGKVLGLVPKQHLAGD 117 Query: 121 SEFHEKRTFI-----------SGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQG 167 +E R F G I F IR G+ ICED W L ++G Sbjct: 118 GLHYEPRWFRPWKPGVQDEWQGGVPMGDIDFDVNGIRFGLEICEDAWVADRPGARLARRG 177 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASF-CFDG 225 A+ +F+ +AS + K + R V +Y N +G + ++DG + F G Sbjct: 178 ADIIFNPSASHFSIGKTRIRRNFVIDGSRAFGCAYVYANLLGNEAGRAVYDGGNMIAFAG 237 Query: 226 QQQLAFQMKHFSEQNFMT---------------------------------EWHYDQQLS 252 + A F + T EW ++L Sbjct: 238 ELTAASPRLGFEDVVLTTATVDVDLGRAKQARTGSFEPMIEPDGDCIKAAIEWEDVRRL- 296 Query: 253 QWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA--- 309 + + D A P +E+ A L+L DY++K+ ++ LSGG DS CA Sbjct: 297 --DPPAVDHAPWEDGPKVKEQEFTRAIALALFDYLRKSRARGFVVSLSGGADSTACALLV 354 Query: 310 ----AIAVDALGKEN-VQTIMLP-------------------YKYT---SPQSLEDAAAC 342 + ++ALG E V+ + +P Y+ T S S A Sbjct: 355 RTMVRLGLNALGPEEFVKKLGVPGLKPNDPIDYMVERLLICVYQATENSSKASQNAARQV 414 Query: 343 AKALGCKYDVLPIHDLVNHFFSLM----SQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A +LG + L + L + S++ + L E I +NIQ+R R + L+N Sbjct: 415 AASLGATFYNLDVEPLAAGYRSMIEHAVGRALTWEQDDIGLQNIQARTRAPGVWLLANVY 474 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +LL+TSN+SE +VGY T+ GD G P+ + K + + W GP T Sbjct: 475 NMLLLSTSNRSEAAVGYATMDGDTCGSIAPIAGIDKDFLLKWLRWMFE---AQPFGPCTA 531 Query: 459 VIPPSILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIVENEE-----------SFI 504 + +L++ PSAELRP QTD+ L PY L+ I + + +++ +F Sbjct: 532 L--ELVLQQKPSAELRPAALDQTDEADLMPYDALNFIELQAIRDKQGPTEAYFKTCTAFP 589 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKR-RQAP 533 N +E + + L G+++KR R AP Sbjct: 590 NTPEERVYQWIEKFFTLWSGNQWKRERYAP 619 >gi|312898607|ref|ZP_07757997.1| NAD+ synthetase [Megasphaera micronuciformis F0359] gi|310620526|gb|EFQ04096.1| NAD+ synthetase [Megasphaera micronuciformis F0359] Length = 631 Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 146/550 (26%), Positives = 243/550 (44%), Gaps = 74/550 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKI +AQL G+ GN+ + + +EA + DL++F EL I GY D + ++ Sbjct: 2 LKIGLAQLLVEPGNARGNVTRMKEYIQEAVTKNCDLVIFPELCIPGYFIGDNWDQTDYMN 61 Query: 65 ACSSAIDTLKSDTHD-----GGAGIVVGFPRQDQEGVL---NSVVILDAGNIIA------ 110 C S + +++ + + G + G + + +G + N++ I G IA Sbjct: 62 ECISLGEEIRALSENITVIFGNVALEKG--KINPDGRIRKYNAMFIAQNGKFIAPGRSPY 119 Query: 111 -VRDKINLPNYSEFHEKRTFIS---------GYSND-----PIVFR---DIRLGILICED 152 K LP+Y EF + R F S + D + F+ ++ +G LICED Sbjct: 120 PFYIKTLLPDYREFDDLRYFTSLTEVATERHAFPEDFLSPLHLTFKNGDELIIGPLICED 179 Query: 153 IWKNSNICKHLK----KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQV 208 W + K + + +++ SP+ K ++RH + ++ P +YVN Sbjct: 180 SWDENYAVKPMSYLNDSYDIDLYVNISNSPFTLGKPERRHRLFGHSLNRFKKPAVYVNCT 239 Query: 209 G----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST 264 G G++ FDG++ ++ L ++ F N + +D + M S+ Sbjct: 240 GVQNNGKNIYTFDGSAGAYNNDGSLFYE--GFPYTNELVVLTFDPDTRSFTGMKSISSQR 297 Query: 265 MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 E + Y A ++ + ++ KV+IG+SGGIDSA+ AA+ E++ + Sbjct: 298 -----SETASIYEALHYGIQKFTEQAGIRKVVIGVSGGIDSAVNAALYATVFKPEDMLLV 352 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE----------- 373 +P Y S + A AK +GC Y V+P+ D + QFLQ Sbjct: 353 NMPSTYNSQMTKSLAEESAKNIGCTYAVIPVQDSLEL---TRKQFLQMNLTRNGEVLSSL 409 Query: 374 -PSGIVAENIQSRIRGN-ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 + + EN+Q+R R + IL A + +NK+E++VGY TLYGD +G D Sbjct: 410 TLTPFMEENVQARDRSSRILAAAAAAFGGAFTCNANKAEMTVGYATLYGDGAGFLAATAD 469 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ--TDQESLPP-YPI 488 L+K QV+ LA + N+ EV+P ++ PSAEL Q T + P YP Sbjct: 470 LWKHQVYDLAHYLNTEVFGR------EVVPQGSIDIIPSAELSAAQDITKGQGDPLIYPY 523 Query: 489 LDDIIKRIVE 498 D + VE Sbjct: 524 HDYLFSAFVE 533 >gi|257064671|ref|YP_003144343.1| NAD+ synthetase [Slackia heliotrinireducens DSM 20476] gi|256792324|gb|ACV22994.1| NAD+ synthetase [Slackia heliotrinireducens DSM 20476] Length = 268 Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 97/265 (36%), Positives = 139/265 (52%), Gaps = 5/265 (1%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y C+ L ++ V++GLSGGIDS+L A + V+ LG E+V MLP Y++ S Sbjct: 7 YQVCINGLTQFLHSTRTTDVVLGLSGGIDSSLVACMCVEVLGPEHVHGYMLPGPYSTDHS 66 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L DA A LG +++ I + F + ++ G+ AEN Q+R R +LMALS Sbjct: 67 LIDAQLLANNLGLNTEIISIVGAYDAFAAELAAHCNGF-GGLAAENTQARCRMVMLMALS 125 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N ML+ T NKSE +GY TLYGD +G + P+ LYKT VF + + N+ +GL P Sbjct: 126 NAHGWMLINTGNKSEACMGYSTLYGDTAGAYAPIGGLYKTDVFAASRYVNARAEQAGLTP 185 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDET 514 IP +L K PSAEL P Q D+ +L Y LD ++ VE+ Y+ + Sbjct: 186 ---PIPEHVLVKPPSAELAPGQVDEATLGSYAELDRLLIDHVEHGMGIPELVMAGYDADE 242 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKIT 539 V+ V + E+KR P K+ Sbjct: 243 VQRVVKRVASYEFKRNLEPPFPKVA 267 >gi|291542608|emb|CBL15718.1| NAD+ synthetase [Ruminococcus bromii L2-63] Length = 636 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 145/611 (23%), Positives = 268/611 (43%), Gaps = 86/611 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N +EA++ G L++F EL ++GY DL +++ + Sbjct: 6 IKVASATPKIRVADCKTNTINIIEQIKEAHKNGASLVVFPELCVTGYTCSDLFYQRVLLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +++ + +T D + G P + + N ++ G+I+ + K+N+PNYSEF+ Sbjct: 66 AAEKSVEKILKETADLDIISIAGVPVAIESALYNCAAVIYKGDILGIVPKVNIPNYSEFY 125 Query: 125 EKRTFISGYS--------------NDPIVF-----RDIRLGILICEDIWKNSNICKHLKK 165 E R + SG + +D +VF RD G+ +CED+W ++ K Sbjct: 126 EVRHYTSGKNLYDEISYAGVETIISDNLVFCCDKMRDFSFGVEVCEDLWVAASPSVEHAK 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + + S K + R ++V Q + IY + G+ +++F G + Sbjct: 186 HGATIICNPSTSDDVIGKAQYRRDLVKMQSGKLCCAYIYSDSGFGESTTDMVFSGQNIIS 245 Query: 224 DGQQQLAFQMKHF--------------------------SEQNFMTEWHYDQQLSQWNYM 257 + LA + K F S+ N T ++D L + Sbjct: 246 ENASLLA-ESKRFTTGIIYADIDVQKLSAERRKTNTFTKSDDNNFTSVYFDMPLKH-TEL 303 Query: 258 SDDSASTMYIPLQEEEAD--------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 + + + T +IP + + D A L+ R + ++GLSGG+DS L Sbjct: 304 TREFSQTPFIPSNKSDLDARCEEIITMQATGLATR--LAHTGIQNAVLGLSGGLDSTLAL 361 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V D LG ++N+ T+ +P T+ ++ +A A+A G ++ + I V F+ Sbjct: 362 IVCVHAFDMLGIDRKNIHTVTMPCFGTTKRTKSNAQLLAEAYGVSFEDINITKAVRQHFA 421 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ E + I EN Q+R R ILM LSN +++ T + SE+++G+ T GD Sbjct: 422 DINH--DESVTNITYENSQARERTQILMDLSNKYNGLVIGTGDLSELALGWATYNGDHMS 479 Query: 425 GFNPLKDLYKTQVFQLASWRNSH--GI--TSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 + + KT V L ++ H G+ T L L + P +L + E+ Q + Sbjct: 480 MYAVNVSIPKTLVRYLTAYEAQHSEGVLKTVLLDVLDTPVSPELLPPDKNGEIA--QKTE 537 Query: 481 ESLPPYPILDDIIKRIVE-----NEESFINNDQ---EYNDETVR-----YVEHLLYGSEY 527 + + PY + D + +V N+ ++ +Y++ T++ +V + ++ Sbjct: 538 DVVGPYELHDFFLYYLVRFGFEPNKIYYLAKKSFAGKYDNATIKKWLTTFVRR-FFTQQF 596 Query: 528 KRRQAPVGTKI 538 KR P G K+ Sbjct: 597 KRSCLPDGPKV 607 >gi|183220721|ref|YP_001838717.1| putative glutamine-dependent NAD(+) synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910822|ref|YP_001962377.1| NAD(+) synthase (glutamine-hydrolyzing) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775498|gb|ABZ93799.1| NAD(+) synthase (glutamine-hydrolyzing) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779143|gb|ABZ97441.1| Putative glutamine-dependent NAD(+) synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 646 Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 161/628 (25%), Positives = 261/628 (41%), Gaps = 103/628 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K KIA LN D GN + A + DLILF EL ISGY ED F+ S Sbjct: 1 MTKYKIAAVSLNTTPLDFLGNFETIQSAILSKETRDADLILFPELCISGYGCEDAFFRPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + +D +K T ++VG P + N + +L G I A+ K+NL N Sbjct: 61 LWEKGKEVLDKIK--TISPNQVVIVGLPIFIDSFLYNCMAVLLHGKIQAIVPKLNLANTG 118 Query: 122 EFHEKRTFIS--GYSNDPIV--------------FRDIRLGILICEDIWKNSNICKHLKK 165 +E+R F S + N + ++D+ I ICED W + + Sbjct: 119 VHYERRWFHSPKTFLNQSVTIGGMEIPFGHFLFSWKDLHFAIEICEDSWSSFKPSQVYNL 178 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-ELIFDGASF--- 221 GA+ L S AS + K R +I T + ++ N G + +IF+G +F Sbjct: 179 AGADVLLSPGASHFAMGKQNIRRQIFTETSRSQNNLQVFTNLCGNESGRIIFEGGAFFAS 238 Query: 222 ---------------------CFDGQQQLAFQMKHFSEQ--NFMTEWHYDQQLSQWNYMS 258 F + + + +HF E T LS N Sbjct: 239 CGRLVKEGPRLHFTPFAITSHSFHLDEIRSAKARHFREPLPEPKTTLIPKINLSPLNPEE 298 Query: 259 DDSASTMYIPLQEEEADYNA---------------CVLSLRDYVQKNNFHKVIIGLSGGI 303 ++ + + ++E NA L L DY++K+ + LSGG Sbjct: 299 AKTSPFLVLDKRDESISPNADPTENLSPFEEFTKAVSLGLFDYLRKSKTKGYTLSLSGGA 358 Query: 304 DSALCAAIA---------------VDALGKENVQTIMLPYKYTS---PQSLEDAAACAKA 345 DSA CA + + LG ++ Y+ TS P + E A ++ Sbjct: 359 DSATCAILVSTFVTIAKKENGDDHLTKLGWNEKNLLVTLYQKTSNNSPITEEIAKTLSEE 418 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQF----LQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 L C++ + I ++V+ SL+ L + + +NIQ+R+R ++ L+N + + Sbjct: 419 LDCEFHSISIDEMVSSSVSLIESVKGTKLNWKEHDLALQNIQARVRSPLIWLLANLNGHL 478 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN--SHGITSGLGPLTEV 459 LL+T N+SE +VGY T+ GD SG PL + K + + W + G + P + Sbjct: 479 LLSTGNRSEAAVGYTTMDGDSSGSIAPLAGVSKEFLLE---WLDDIQKGNNRYISPKQSI 535 Query: 460 IPPSILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIV---ENEESFINN-DQEYND 512 + P+AEL+P HQ D++ L PYPIL+ I +++V NE + +EY Sbjct: 536 --QMLRNTKPTAELKPLTEHQEDEKDLMPYPILNSIERKLVYLTMNESEVLEELKKEYPW 593 Query: 513 ET-------VRYVEHLLYGSEYKRRQAP 533 E+ ++ + L S++KR + P Sbjct: 594 ESKEQLFGYLQKFKTLFRISQWKRERLP 621 >gi|291278883|ref|YP_003495718.1| NAD(+) synthase [Deferribacter desulfuricans SSM1] gi|290753585|dbj|BAI79962.1| NAD(+) synthase [Deferribacter desulfuricans SSM1] Length = 275 Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 156/296 (52%), Gaps = 48/296 (16%) Query: 271 EEEADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 E DY L D++ +K V++GLSGGIDSAL A +A ALGK+ V L Sbjct: 5 ELNLDYRLVTKVLTDFIKNETEKVGIKNVVVGLSGGIDSALSATLATLALGKDRVYAYAL 64 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 PYK +S +SL+DA A LG ++++ I D V+ +F + S + N+ +R+ Sbjct: 65 PYKTSSKESLDDAKLVADFLGVNFEIIEITDFVDPYFD-----KNPDISKLRKGNVMARM 119 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +L S ++L TSNK+E+ +GYGT YGD++ NP+ DLYKTQV++LA + N Sbjct: 120 RMIVLFDKSAEVGGLVLGTSNKTELLLGYGTWYGDLASAINPIGDLYKTQVWELAVYLN- 178 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE----- 500 IP ++EK P+A+L Q+D++ L Y +D ++K ++++ Sbjct: 179 -------------IPKRVIEKKPTADLWEGQSDEDELGFTYKEVDRLLKAMIDDRKDSVE 225 Query: 501 -------ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 E+FINN ++ + +++K RQ P+ KI+ ++ +D Y Sbjct: 226 LIRMGFSENFINN-----------IKERIRKNQFK-RQLPIIAKISNRTIDKDFRY 269 >gi|253583212|ref|ZP_04860410.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium varium ATCC 27725] gi|251833784|gb|EES62347.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium varium ATCC 27725] Length = 273 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 96/272 (35%), Positives = 151/272 (55%), Gaps = 26/272 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L++ V K F KV++GLSGGIDSAL A +A A G ENV IM+PYK +S +S+E A Sbjct: 19 LKEEVGKVGFSKVVLGLSGGIDSALVAFLAAKAFGPENVLGIMMPYKTSSKESVEHAELV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 KALG + + I +V +F+ L+++ + N +R R +IL S +A++ Sbjct: 79 IKALGIRSKKIEITPMVEAYFN-----LEQDMDSLRKGNKMARERMSILFDHSAKERALV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+EI +GY T +GD + NP+ DLYKT V+ L+ +P Sbjct: 134 LGTSNKTEIMLGYSTQFGDSASAVNPIGDLYKTHVWNLSRHMG--------------VPR 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETVRYV 518 ++EK PSA+L QTD++ L Y + D+I+ R+++ E I + ++ +TV + Sbjct: 180 ELVEKKPSADLWEGQTDEQELGFSYKMADEILYRLIDERMTSEEIIR--EGFSKDTVEKI 237 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 + S+YKR+ P K++ ++ G + YP Sbjct: 238 IKKIKLSQYKRK-LPTIAKVSKRTMGMEFRYP 268 >gi|319789732|ref|YP_004151365.1| NAD+ synthetase [Thermovibrio ammonificans HB-1] gi|317114234|gb|ADU96724.1| NAD+ synthetase [Thermovibrio ammonificans HB-1] Length = 278 Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 96/268 (35%), Positives = 151/268 (56%), Gaps = 21/268 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ +QK F K ++GLSGG+DS+L A +AV ALG NV I +PY+ +SP S EDA Sbjct: 25 IREELQKAGFSKAVVGLSGGVDSSLAAFLAVKALGNNNVIGISMPYRTSSPSSREDAKLV 84 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG ++ + I ++ ++ S+F + +P + N +R R +IL ++ A++ Sbjct: 85 AQVLGIEFHEIDITPQIDAYY---SRFQEADP--VRKGNKMARERMSILYDFAHWKGALV 139 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNKSE+ +GY T +GD + NPL DLYKTQV+QLA + +P Sbjct: 140 IGTSNKSELLIGYSTRWGDSAHDVNPLGDLYKTQVWQLAEFTG--------------VPE 185 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 I++K PSA+L P QTD+ + Y LD I+ V+ S + + + V V + Sbjct: 186 RIVKKKPSADLWPGQTDEGEIGLTYRELDQILIGYVDLRLSSAELKKLFEPKKVERVLSM 245 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + S+YKR+ P+ KI ++ +D LY Sbjct: 246 VKRSQYKRK-LPIICKIAQRTVDKDFLY 272 >gi|320102986|ref|YP_004178577.1| NAD+ synthetase [Isosphaera pallida ATCC 43644] gi|319750268|gb|ADV62028.1| NAD+ synthetase [Isosphaera pallida ATCC 43644] Length = 692 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 165/659 (25%), Positives = 273/659 (41%), Gaps = 136/659 (20%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A LN VGD +GN + EAN +G+ L+L E+ I GY D + + I+ Sbjct: 7 RVAVATLNQTVGDWSGNARRIGETFAEANHRGVRLLLLPEMCIPGYSLGDRLLRGGTIER 66 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 L T D A +VG P + + + N++ +L G I + K NL +E Sbjct: 67 SWDRAQALAEQTGDLVA--LVGLPIRFENVLFNAMAVLAGGRIAGLVAKENLATGDVEYE 124 Query: 126 KRTFISGYSNDPIVFRDI------------------RLGILICEDIWKNSNICKHLKKQG 167 R F S + + R GI ICED WK G Sbjct: 125 HRYFQPWPSGRLVPYEGPDGTHVPLGTQMFQAEGIGRFGIEICEDAWKGIRPGSLFALAG 184 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGA------- 219 AE + + +AS + K + R ++ +Y + VG L+FDG+ Sbjct: 185 AELIVNPSASWFAIGKHRVRRRMIQQASEEDCCAYLYTSLVGCDATRLVFDGSMFIAVNG 244 Query: 220 -------SFCFDGQQQLAFQMKHFSE--QNFMTE--WHYDQQ-LSQWNY----------- 256 F F+ + L ++ +E Q M + W QQ L++ ++ Sbjct: 245 RIEGEGPRFVFEREWTLMDRVIDLTELHQTRMEKGSWRDQQQRLARGDFGQVPNVTRLTA 304 Query: 257 ----MSDDSAST---MYIPLQEE--------------------EADYN------ACVLSL 283 ++D A ++P + E EAD N A L L Sbjct: 305 VGRCATNDPAPAPRPYWLPPEPEHPDPSLRHLETGALRGRTITEADLNHLELELALALGL 364 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAI---------------AVDALGKENVQTIMLPY 328 RD+++K+ + LSGG DSA+ A + A+ ++ + + L Sbjct: 365 RDHLRKSGIDTCCLALSGGRDSAMVAYLVHRMQRYDHPELDDPALRSIMAQRLICAYLAT 424 Query: 329 KYTSPQSLEDAAACAKALGCKY---DVLPIHDLVNHFFSLMS--QFLQEEPS-GIVAENI 382 +S + E A A+ +G + D+ P D + M+ Q +EP + +NI Sbjct: 425 DNSSRATREAARTVAEEIGATFHLGDIQPALDQTLRTVAQMTGVQLSWDEPRHDLTLQNI 484 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 Q+R+RG + ++N +A+LL TSNKSE +VGY T+ GD SGG PL D+ K+ V Sbjct: 485 QARMRGTTIWTIANLHRALLLVTSNKSEAAVGYTTMDGDSSGGLAPLADVPKSLVMLWLD 544 Query: 443 WRNS-HGITSGLGPLTEVIPPSILEKSPSAELRPH---QTDQESLPPYPILD-------- 490 W HG P +I + SAELRP Q+D+E L P+ ILD Sbjct: 545 WAARFHGYRG---------PQAIAVMAASAELRPPDRVQSDEEDLMPFTILDQLMYAFVQ 595 Query: 491 ------DIIKR---IVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 +I +R + + + N+ + + + ++V + + +++KR + + ++TA Sbjct: 596 LGLDPLEIFRRFWPVFRDHPRYRNDPRPFAADIRKFVRLMCF-AQWKRDRQAISFRVTA 653 >gi|253702073|ref|YP_003023262.1| NAD synthetase [Geobacter sp. M21] gi|251776923|gb|ACT19504.1| NAD+ synthetase [Geobacter sp. M21] Length = 273 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 30/273 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD V K K ++GLSGGIDSAL A IA +ALG ENV +PY+ ++P+S A Sbjct: 19 VRDEVHKVGLRKGVLGLSGGIDSALVAYIAAEALGPENVYAYCMPYRTSNPESEAHARLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A++LG Y V+ I +V+ +F L E S + N +R R IL S ++ Sbjct: 79 AESLGINYKVIGITGMVDAYFDLYP-----EASNMRRGNKMARERMTILYDHSADVAGLV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGTL+GDM+ NP+ D+YK+QV++L + +G +P Sbjct: 134 LGTSNKTELLLGYGTLHGDMASALNPIGDIYKSQVWEL---------SEAMG-----VPH 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINN--DQEYNDETVR 516 ++EK PSA+L QTD++ L Y D+++ R+V+ + E I + ++ D R Sbjct: 180 EVIEKKPSADLWAGQTDEQELGFTYRDADELLYRMVDQRMSREELIAAGFEAQFIDNVHR 239 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 V+ GS +KRR P+ K++ ++ RD Y Sbjct: 240 KVQ----GSHFKRR-LPIIAKVSNRTIDRDFRY 267 >gi|237807362|ref|YP_002891802.1| NAD+ synthetase [Tolumonas auensis DSM 9187] gi|237499623|gb|ACQ92216.1| NAD+ synthetase [Tolumonas auensis DSM 9187] Length = 678 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 154/594 (25%), Positives = 250/594 (42%), Gaps = 96/594 (16%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA A +N D+ GN+A R A +A +Q D++L EL ++GY ED+ F Sbjct: 1 MRQTLTIATASINTTPLDLDGNLALIRAAVADAVQQQADVLLLPELALTGYGCEDMFFSA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPN 119 ++ + + L ++T + VGFP G V N+V +L + V K +L Sbjct: 61 DWVSGVPAYLSQL-AETLPPSMMVAVGFPLLITGGQVFNAVALLSQYQVHGVVCKQHLAR 119 Query: 120 YSEFHEKRTFISGYSND--------------PIVFR--DIRLGILICEDIWKNSNICKHL 163 +E R F + + IVF IRLG ICED W S + L Sbjct: 120 NGIHYEPRWFTPWPAGEVMTLELAGQHVPVGDIVFEVEGIRLGFEICEDSWVASRPGRSL 179 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG-ASF 221 ++ + + + +AS + K K R + V +Y N +G + ++DG A Sbjct: 180 YERQVDVIMNPSASHFALGKQKVRRQFVCEGSRAYGAVYVYTNLLGCEAGRAVYDGDAMI 239 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEW------HYDQQLSQWNYMSDDSASTMYIPLQEEEAD 275 +G+ ++ F+ + + +S + + +P +E D Sbjct: 240 ASNGELVMSSDRLSFAPWRVQSATVDIGLNRSQRMISSQRLQPAEQRGIVIVPFDWQEED 299 Query: 276 YN-----------------AC---VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---- 311 Y+ AC L L D+ +K + LSGG DSALC + Sbjct: 300 YHRALSPQTTFADEDPHAAACRAIALGLWDWQRKTYTSGYALSLSGGADSALCGTLVWFA 359 Query: 312 ---AVDALGKE-------------------------------NVQTIMLPYKYTSPQSLE 337 AV LG+E NV T + S Sbjct: 360 QVQAVLTLGEEAYAQTLAQGRINVALRGDKPLLAWIHDDVMPNVLTTVYQGSAHSGNVTR 419 Query: 338 DAAA-CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-----SGIVAENIQSRIRGNIL 391 +AAA A +G + I +LV + L++ ++P + +NIQ+R+R + Sbjct: 420 NAAAGLADEMGALHYDWSIAELVAGYLKLVNDLTPDDPMTWERDDLALQNIQARVRSPGI 479 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI-- 449 ++N +L+ TSN SE SVGY T+ GD SG +P+ + K++V Q+ + GI Sbjct: 480 WLIANRQNKLLMATSNLSEASVGYCTMDGDTSGVLSPIGGVSKSRVLQINRYIMEQGIPL 539 Query: 450 --TSGLGPLTEVIPPSILEKSPSAELRP-HQTDQESLPPYPILDDIIKRIVENE 500 + L L +I+ ++P+AELRP QTD+ L PYP++ D I+RI + + Sbjct: 540 QDSPDLPRLALAAMEAIVNQAPTAELRPVEQTDEADLMPYPVM-DAIRRINQTQ 592 >gi|15594867|ref|NP_212656.1| NH(3)-dependent NAD+ synthetase [Borrelia burgdorferi B31] gi|2688436|gb|AAC66885.1| NH(3)-dependent NAD+ synthetase [Borrelia burgdorferi B31] Length = 222 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/230 (38%), Positives = 132/230 (57%), Gaps = 13/230 (5%) Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQ 383 +P K++S S+ DA ++ LG K +PI DL F + S+F + + G+ EN+Q Sbjct: 1 MPSKFSSAGSISDAKELSRKLGFKLIEMPIKDL----FQVSSRFFEGYFDIKGVTGENLQ 56 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R+RG +LM+ SN ++LL T NKSEI+VGY TLYGD GG + DL+KT+V+ L ++ Sbjct: 57 ARLRGLLLMSYSNSQNSLLLNTGNKSEIAVGYCTLYGDTCGGLALIGDLFKTEVYDLVNY 116 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 N+ +IP +I+ K PSAELR Q D + LP Y +LD I+ R + ES Sbjct: 117 INAKFDQC-------IIPVNIILKEPSAELRFDQKDSDYLPKYEVLDVILNRYLIGNESV 169 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + + V V +L + +EYKRRQ K++ K+FG + PI N Sbjct: 170 DSIYLNFEKGIVDKVLNLYFKNEYKRRQGAPIVKVSEKTFGFELSMPILN 219 >gi|196229945|ref|ZP_03128809.1| NAD+ synthetase [Chthoniobacter flavus Ellin428] gi|196226271|gb|EDY20777.1| NAD+ synthetase [Chthoniobacter flavus Ellin428] Length = 665 Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 163/587 (27%), Positives = 249/587 (42%), Gaps = 94/587 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K L +A A LN D GN A EA +G+ ++ EL I+GY ED + Sbjct: 1 MKLLHVAAATLNQTPLDWEGNKRNILAAIAEARVRGVSVLCLPELCITGYGCEDAFHSAA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + T G + +G P + + N+ ++ G I+ K L Sbjct: 61 THATAWEVLQEILPATR--GMIVSLGLPIFHRNALFNTAGLVVDGRIVGFVGKQFLAGDG 118 Query: 122 EFHEKRTFI---SGYSND--------PI---VFR--DIRLGILICEDIWKNSNICKHLKK 165 +E R F SG + PI F DIR+G ICED W + +L + Sbjct: 119 IHYEPRWFKPWPSGLQSTIERNGRSCPIGDLCFDCGDIRIGFEICEDAWVAARPGANLAR 178 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-ELIFDGASFCFD 224 Q + L + +AS + K++ R V L +Y N VG + IFDG + Sbjct: 179 QSVDLLLNPSASHFAFGKIEVRRRFVAEGSRAFGLTYVYANMVGNESGRAIFDGGALIAT 238 Query: 225 GQQQLAFQMKHFS-------------EQNFMTE-----WHYDQQLSQWN----------- 255 G + +A + FS E+ M + + D Q S+ Sbjct: 239 GGRLVA-EGNRFSFADCEVTSAVVDLERTRMGQARTGSFQPDLQSSESGCVRCDFDFPVP 297 Query: 256 YMSDDSASTMYI---PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA------ 306 ++D+ AS P +EE A VL L DY++K+ H ++ LSGG DSA Sbjct: 298 AIADNGASRAAWEESPQIKEEEFTRAIVLGLFDYLRKSRSHGFVVSLSGGADSAAVTILA 357 Query: 307 -LCAAIAVDALGKEN-----------------------VQTIMLPYKYTSPQSLEDAAAC 342 L A + + +LG+E V T+ +S + A Sbjct: 358 ALTARLGLVSLGREGFLAKLGYRHDLSELPEAKLVGALVTTVYQGTANSSETTRHAARVV 417 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMS----QFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A+A+G + + LV + L+S + L I +NIQ+R+R L+N Sbjct: 418 AEAVGVTHCEWEVDGLVAEYTRLVSTAIGRSLTWSTDDIPLQNIQARVRAPGAWMLANLR 477 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLT 457 A+LL TSN+SE +VGY T+ GD GG +P+ + K + Q +W HG +G P Sbjct: 478 NALLLATSNRSEAAVGYATMDGDTCGGLSPIAGIDKAFLRQWLAWMEQHGPAETGAIPEL 537 Query: 458 EVIPPSILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIVENEE 501 VI ++P+AELRP HQTD+E L PYPILD I + + +++ Sbjct: 538 HVIN----AQAPTAELRPQEYHQTDEEDLMPYPILDAIERAAIRDKQ 580 >gi|325294859|ref|YP_004281373.1| NH(3)-dependent NAD(+) synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065307|gb|ADY73314.1| NH(3)-dependent NAD(+) synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 279 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 156/288 (54%), Gaps = 26/288 (9%) Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 ++ ++++ + +R+ K F K ++G+SGG+DSAL A + V ALGKEN+ I Sbjct: 8 FLKIKDKTFIRDVLTFFIREEFHKVGFKKAVVGISGGVDSALSAFLGVMALGKENIIGIS 67 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +PY+ +S S+EDA A LG ++ + I V+ ++ + + + N +R Sbjct: 68 MPYRTSSNSSIEDARLVANTLGIEFHEIDITPQVDSYYEMFP-----DADNVRRGNKMAR 122 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R +IL ++ A++L TSNKSE+ +GY T +GD NPL DLYKTQV++LA + Sbjct: 123 ERMSILYDFAHWKGALVLGTSNKSELLIGYSTRWGDGVHDINPLGDLYKTQVWELAEFVG 182 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEE 501 +P I++K PSA+L P QTD+ + Y +LD I+ V+ E+ Sbjct: 183 --------------VPERIVKKKPSADLWPGQTDEGEIGLSYHLLDQILAGYVDLRLGEK 228 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 I + Y + V+ V L+ S+YKRR P+ KI+ ++ +D LY Sbjct: 229 ELI--EAGYEKKVVKRVLKLVQNSQYKRR-LPIICKISQRTVDKDFLY 273 >gi|313675277|ref|YP_004053273.1| nad+ synthetase [Marivirga tractuosa DSM 4126] gi|312941975|gb|ADR21165.1| NAD+ synthetase [Marivirga tractuosa DSM 4126] Length = 616 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 144/547 (26%), Positives = 229/547 (41%), Gaps = 77/547 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA A LN + D AGN +A +A+ G++L+ F EL I GY ED+ + Q Sbjct: 1 MKIAGATLNQIPMDWAGNAHNVLQALHDADEMGVELLCFPELSICGYGCEDVFLSEWMWQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + T K G P + + + N V I + K NL N + Sbjct: 61 KAFKTL-TEKILPFAPKFAFTAGLPVKFEGKMYNCVAFCKNREIQYIIPKQNLANDGVHY 119 Query: 125 EKRTF------------ISGYS---NDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGA 168 E R F I G + D ++ F + ++G ICED W+ L K+G Sbjct: 120 EPRWFTAWEVGKKSEINIKGTNILIGDYVIDFEEYKIGFEICEDAWREDRPANRLCKRGV 179 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCFDGQQ 227 + + +AS + +K R ++V + IY N +G + +I+DG Sbjct: 180 NLILNPSASHFAIDKSLSRQDLVVSSSQNYDCTYIYANLLGNEAGRMIYDG-ELIIAKNG 238 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 +L F+ + S +N+ QL W+ + S + + A L+L DY+ Sbjct: 239 ELKFRNELLSFRNY--------QLGIWDTQKEHSKIAESFESKPNQEFRKAVSLALFDYL 290 Query: 288 QKNNFHKVIIGLSGGIDSALCAAI-------AVDALG----------------------- 317 +K+ + I+ LSGG DS+ A + ++ LG Sbjct: 291 RKSYSNGFILSLSGGADSSTSAVLVAEMIRLGIEELGLEQFLKKINKADWFETLKTEQDC 350 Query: 318 KENVQTIMLPYKYTSPQ-----SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ---- 368 ++ + +L Y S + + E A A +G + I D V + +S+ Sbjct: 351 RKTIANRLLTTAYQSTENSGYSTFESAKKLANEIGAIFYHWNIDDEVKGYTQKVSENIGR 410 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 L + I +NIQ+R R I+ L+N A+LLTTSN+SE SVGY T+ GD SG P Sbjct: 411 KLNWDQDDIALQNIQARARSPIIWILANIKNALLLTTSNRSEGSVGYTTMDGDTSGSIAP 470 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH---QTDQESLPP 485 + + K + Q W ++ L + + P+AELRP Q+D+ L P Sbjct: 471 IAAIDKPFIIQWLRWAENNLGYKSLSYVNSL--------QPTAELRPEDQAQSDETDLMP 522 Query: 486 YPILDDI 492 YP+L I Sbjct: 523 YPLLQKI 529 >gi|257467376|ref|ZP_05631687.1| NAD synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|315918506|ref|ZP_07914746.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|313692381|gb|EFS29216.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 259 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 95/266 (35%), Positives = 144/266 (54%), Gaps = 23/266 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ F KVI+GLSGGIDSAL A +AV ALGKENV I +PYK +S +S++ A Sbjct: 12 IQEQVKNAGFKKVILGLSGGIDSALVAYLAVKALGKENVIAIKMPYKTSSQESIDHANLV 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + L + + I +V+ +F Q S + N +R R +L S A++ Sbjct: 72 LQDLDLQEKTVEITPMVDAYFE-----NQTSASSLRRGNYMARTRMTVLFDQSALENALV 126 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+EI +GYGTL+GDM+ FNP+ D+YK V+ L+ + +P Sbjct: 127 IGTSNKTEILLGYGTLFGDMACSFNPIGDIYKKDVWSLSRYMG--------------VPK 172 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 I+EK PSA+L QTD++ L Y D+I++R+V+ ++S Y + V V Sbjct: 173 EIIEKQPSADLWAGQTDEQELGLSYKEADEILERLVDKKQSLEEIVAAGYEEGIVNKVIQ 232 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRD 546 + S YKR+ P+ + GRD Sbjct: 233 KVKSSAYKRKLNPIAK--VGEVLGRD 256 >gi|148265774|ref|YP_001232480.1| NAD synthetase [Geobacter uraniireducens Rf4] gi|189030449|sp|A5G7Y9|NADE_GEOUR RecName: Full=NH(3)-dependent NAD(+) synthetase gi|146399274|gb|ABQ27907.1| NH(3)-dependent NAD(+) synthetase [Geobacter uraniireducens Rf4] Length = 273 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 94/271 (34%), Positives = 153/271 (56%), Gaps = 26/271 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ V+K K ++GLSGGIDSAL A +A +ALG ENV +PY+ ++P+S A Sbjct: 19 IREEVRKIGLQKAVLGLSGGIDSALVAYLAAEALGPENVYACTMPYRTSNPESEAHARLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG Y V+ I +V+ +F ++ + + N +R R IL S A++ Sbjct: 79 AERLGINYRVIEITPMVDAYFQMVP-----DADNMRRGNKMARERMTILYDHSAAYSALV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGTL+GDM+ NP+ D+YKTQV+QL + +G +P Sbjct: 134 LGTSNKTELLLGYGTLFGDMASALNPIGDIYKTQVWQL---------SEAMG-----VPR 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETVRYV 518 ++EK PSA+L QTD++ L Y +D+++ ++V+ N + I Q ++ + + + Sbjct: 180 EVIEKKPSADLWAGQTDEQELGFTYREVDELLYQMVDLRCNRQELIA--QGFSADFIDKI 237 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + S +KRR PV K++ ++ RD Y Sbjct: 238 YGKVQNSHFKRR-LPVIAKVSTRTIDRDFRY 267 >gi|257467723|ref|ZP_05631819.1| NAD synthetase [Fusobacterium ulcerans ATCC 49185] gi|317062016|ref|ZP_07926501.1| NAD+ synthetase [Fusobacterium ulcerans ATCC 49185] gi|313687692|gb|EFS24527.1| NAD+ synthetase [Fusobacterium ulcerans ATCC 49185] Length = 273 Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 150/270 (55%), Gaps = 22/270 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ V K F+KV++GLSGGIDSAL A +A A G ENV IM+PYK +S +S+E A Sbjct: 19 LREEVGKVGFNKVVLGLSGGIDSALVAFLAAKAFGPENVLGIMMPYKTSSKESVEHAELV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 KA G + + I +V+ +F+ L + + + N +R R +IL S K+++ Sbjct: 79 VKASGIRSKKIEITPMVDAYFA-----LDPDMNSLRKGNKMARERMSILFDHSAKEKSLV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+EI +GY T +GD + NP+ DLYKT V+ L+ +P Sbjct: 134 LGTSNKTEIMLGYSTQFGDSASAVNPIGDLYKTHVWNLSKHMG--------------VPR 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEH 520 ++EK PSA+L QTD++ L Y + D+I+ R+++ + QE + +TV + Sbjct: 180 ELIEKKPSADLWEGQTDEQELGFSYKMADEILYRLIDERMTPEEIIQEGFLKDTVEKIIK 239 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 + S+YKR+ P K++ ++ G + YP Sbjct: 240 KIKLSQYKRK-LPTIAKVSKRTMGMEFRYP 268 >gi|322418214|ref|YP_004197437.1| NAD+ synthetase [Geobacter sp. M18] gi|320124601|gb|ADW12161.1| NAD+ synthetase [Geobacter sp. M18] Length = 273 Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 153/273 (56%), Gaps = 30/273 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD V K K ++GLSGGIDSAL A IA +ALG ENV +PY+ ++P+S A Sbjct: 19 VRDEVYKVGIRKGVLGLSGGIDSALVAYIAAEALGPENVHAYCMPYRTSNPESEAHARLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A++LG ++VL I ++V+ +F L+ + + N +R R IL S ++ Sbjct: 79 AESLGINFEVLEITEMVDAYFDLVP-----DADNMRRGNKMARERMTILYDHSAAVGGLV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGTL+GDM+ NP+ D+YK+QV++L + +G +P Sbjct: 134 LGTSNKTELLLGYGTLHGDMASALNPIGDIYKSQVWEL---------SEAMG-----VPR 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINN--DQEYNDETVR 516 ++EK PSA+L QTD++ L Y D+++ R+V+ + E I D + D + Sbjct: 180 EVIEKKPSADLWAGQTDEQDLGFTYREADELLYRMVDQRMSREELIAAGFDAHFIDNVHK 239 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 V+ GS +KRR P+ K++ ++ RD Y Sbjct: 240 KVQ----GSHFKRR-LPIIAKVSNRTIDRDFRY 267 >gi|187251062|ref|YP_001875544.1| NAD+ synthetase [Elusimicrobium minutum Pei191] gi|186971222|gb|ACC98207.1| NAD+ synthetase [Elusimicrobium minutum Pei191] Length = 271 Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 138/259 (53%), Gaps = 13/259 (5%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y L+ + ++NN K +IG+SGGID A+ +A+AVD G NV + +P K++S +S Sbjct: 10 YKEITAGLKKFTKENNIKKCVIGISGGIDCAVVSALAVDVFGPSNVYGVAIPTKFSSKES 69 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L A AK L + ++ I M + +P + +NIQ R+R N+LMA+S Sbjct: 70 LTLAKKLAKNLKINFQIINIDGTFEAIVKEMGGIKKLKP--LTVQNIQPRLRSNVLMAVS 127 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + ++L T NK+E++ GY TLYGD G PL LYK V++LA++ N + Sbjct: 128 SEVGGVVLATGNKTEVATGYYTLYGDSCGAIAPLACLYKEMVYKLAAYINRN-------- 179 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE--NEESFINNDQEYNDE 513 E+IP + + P+AEL +Q D++ L PY +LD I+ ++ E S I Sbjct: 180 -KELIPQGTITRPPTAELAHNQKDEDDLLPYSVLDKILHMYLDLKLEPSTIAKKLNITVA 238 Query: 514 TVRYVEHLLYGSEYKRRQA 532 V +E+ + +K+ QA Sbjct: 239 EVEKIENRYRKNMFKKAQA 257 >gi|149175182|ref|ZP_01853804.1| Putative glutamine-dependent NAD(+) synthetase [Planctomyces maris DSM 8797] gi|148845791|gb|EDL60132.1| Putative glutamine-dependent NAD(+) synthetase [Planctomyces maris DSM 8797] Length = 663 Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 159/588 (27%), Positives = 247/588 (42%), Gaps = 90/588 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +++A LN D AGN+ + A A QG LI EL I+GY ED F Sbjct: 1 MQLVQVAAVALNQTPLDWAGNVKNIKTAISTARDQGASLISLPELCITGYGCEDAFFSPD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 Q A+ L T G + VG P + N ++ I+ K +L Sbjct: 61 VQQRALHALQELLPLTE--GIVVSVGLPLFYGGALYNCACLISNQRILGFVAKNHLAGDG 118 Query: 122 EFHEKRTF------------ISG--YSNDPIVFR--DIRLGILICEDIWKNSNICKHLKK 165 +E R F I G Y +VF IR+G ICED W + L + Sbjct: 119 IHYEPRWFKAWNSPHVSQVEIEGQSYPLGNLVFDCGGIRIGFEICEDAWAARRPGRDLSQ 178 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCFD 224 + + + +AS + K R +V + IY N +G + +I+DGA+ Sbjct: 179 AAVDLILNPSASHFAFGKQDIRRRLVLESSRAYGVSYIYSNLLGNEAGRIIYDGATLIAS 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN------YMSDDSAST---MYIPLQ----- 270 LA + + +T D L++ N + D T + P Q Sbjct: 239 NGTLLAEGPRLSFKAVVLTTAVIDIDLTRMNRARLMSFQPDQLGKTENRVVAPFQFPKIE 298 Query: 271 ---------EEEADYN--------ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI-- 311 EA N A L L DY++K+ ++ LSGG DS+ AA+ Sbjct: 299 PQPTLKTTAAWEASQNVKSEEFARAVALGLFDYLRKSRSQGFVVSLSGGADSSAVAALVW 358 Query: 312 -----AVDALGKEN-----------VQTIMLP-------YKYT--SPQSLEDAAA-CAKA 345 V LG + Q LP Y+ T S + E AAA A+A Sbjct: 359 LLVKLGVAELGLHSFLSKLSHIPDLAQAADLPARLLTCVYQATRNSSDTTEQAAAKLAEA 418 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEE----PSGIVAENIQSRIRGNILMALSNHSKAM 401 +G Y L + +V ++ L+S L E I +NIQ+R+R + ++N A+ Sbjct: 419 IGADYLKLDVDAIVQNYVELVSDALGRELNWNTDDIALQNIQARVRAPGVWMIANLRNAL 478 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSGLGPLTEVI 460 LL TSN+SE +VGY T+ GD GG +P+ + K + Q W G + +G P+ +++ Sbjct: 479 LLATSNRSEAAVGYTTMDGDTCGGLSPISGIDKAFLRQWLLWMEKTGPVETGNLPILKLV 538 Query: 461 PPSILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIVENEESFIN 505 ++ P+AELRP HQTD+ L PY +LD I + + +++ ++ Sbjct: 539 N----QQVPTAELRPEASHQTDETDLMPYELLDWIERAAIRDKQGPVD 582 >gi|77919810|ref|YP_357625.1| NAD synthetase [Pelobacter carbinolicus DSM 2380] gi|77545893|gb|ABA89455.1| NH(3)-dependent NAD(+) synthetase [Pelobacter carbinolicus DSM 2380] Length = 652 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 157/615 (25%), Positives = 254/615 (41%), Gaps = 90/615 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I + V D+A N + R+ E LF EL ++ Y DL F+ + Sbjct: 11 VRIGVCTPATKVADVAYNCEQIRKLVAET--PDCRFFLFPELCLTAYTCADLFFQPLLVD 68 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AI L T + +VVG P + + N V L G I+ + K LPN EF+ Sbjct: 69 QARKAIVQLAEFTAEHRVTMVVGAPIAHRGRLFNCAVFLSGGRILGIVPKRFLPNTQEFY 128 Query: 125 EKRTFISG----------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHL 163 E+R F S + ND ++FR D +GI ICED+W + L Sbjct: 129 EERWFSSAADLTATELMWDGESIPFGND-LLFRAEGLPDCMIGIEICEDVWVANPPSGQL 187 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS- 220 GA L +L+ASP K++ R +V Q + +Y + G+ +L+F G S Sbjct: 188 AVAGANVLLNLSASPELLGKMEYRRALVQNQSARCLAAYVYASSGPGESSTDLVFSGHSL 247 Query: 221 -------------FCFDGQQQLA-FQMKHFSEQNFMTEWHYDQQLSQWNYMSDD------ 260 F FD Q +A ++ + F Y S +Y D Sbjct: 248 IAENGTILAETERFRFDSQIAVADVDIERLVNERFKNN-SYGGARSDASYRVIDFLLTDV 306 Query: 261 --------SASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDS 305 A+T ++P EEE + C L + +V+IG+SGG+DS Sbjct: 307 TTERLRRPVAATPFVPPVEEERAHR-CHEIFEIQTTGLAKRLLHTGAKRVVIGISGGLDS 365 Query: 306 ALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V A K ++TI +P T+ ++ +A A+ LG V+ I V Sbjct: 366 TLALLVTVKAFDKLGYDRSGIETITMPGFGTTQRTRGNAERLAELLGTGLRVISIDAAVR 425 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F+ + E I EN Q+R R ILM ++N +L+ T + SE+++G+ T G Sbjct: 426 QHFADIGH--DETVHDITYENSQARERTQILMNVANQVGGLLIGTGDLSELALGWCTYNG 483 Query: 421 DMSGGFNPLKDLYKTQVFQLASW----RNSHGITSGLGPLTEV-IPPSILEKSPSAELRP 475 D + + KT V L +W S I++ L + + + P +L + E++ Sbjct: 484 DHMSMYAVNTGVPKTLVRYLVAWCADAEFSGDISAILHDVCDTPVSPELLPPHENGEIK- 542 Query: 476 HQTDQESLPPYPILDDIIKRIVENEES----FINNDQEYNDE-TVRYVEHLL-------Y 523 Q ++ + PY + D + +V + F Q + D+ T R + H L + Sbjct: 543 -QRTEDKVGPYLLHDFYLYHVVRLQHRPSKIFFLARQAFGDQFTAREILHWLQTFYRRFF 601 Query: 524 GSEYKRRQAPVGTKI 538 ++KR P G K+ Sbjct: 602 SQQFKRSCLPDGPKV 616 >gi|21673395|ref|NP_661460.1| NAD synthetase [Chlorobium tepidum TLS] gi|25090735|sp|Q8KEX2|NADE_CHLTE RecName: Full=NH(3)-dependent NAD(+) synthetase gi|21646493|gb|AAM71802.1| NH(3)-dependent NAD+ synthetase [Chlorobium tepidum TLS] Length = 277 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 91/272 (33%), Positives = 155/272 (56%), Gaps = 28/272 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ ++K F V++GLSGGIDSA+ +AV ALG ENV +M+PYK +S +SL+ A Sbjct: 21 IRNEIRKFGFGSVVLGLSGGIDSAVVCELAVRALGVENVLALMMPYKTSSQESLDHAELM 80 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 LG +Y+++P+ ++V+ FF+ + + S + N+ +R R L +S ++ Sbjct: 81 VDRLGIRYEIMPVTEVVDAFFA-----TRPDASRLRRGNVMARSRMLCLYDVSARDGCLV 135 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGT++GDM+ NP+ DLYKTQ+F G+ LG IP Sbjct: 136 LGTSNKTELMLGYGTMFGDMASAVNPIGDLYKTQIF---------GLARHLG-----IPA 181 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINND----QEYNDETVRY 517 +++K PSA+L Q+D+ L Y +D ++ ++E ++ D + + + Sbjct: 182 PLIDKPPSADLWEGQSDEADLGFSYEEVDQLLYMMLEER---MDRDAILAEGIDSAFYQR 238 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 V ++ ++YK R PV K+++++ G D Y Sbjct: 239 VRSMVVRNQYK-RMMPVIAKLSSRTPGIDFRY 269 >gi|189425287|ref|YP_001952464.1| NAD synthetase [Geobacter lovleyi SZ] gi|238692115|sp|B3E4K8|NADE_GEOLS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189421546|gb|ACD95944.1| NAD+ synthetase [Geobacter lovleyi SZ] Length = 273 Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/270 (35%), Positives = 148/270 (54%), Gaps = 24/270 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+D + K K ++GLSGGIDSAL +A +ALG ENV I +PY+ ++P+S A Sbjct: 19 LQDEIWKVGAKKAVLGLSGGIDSALVCHLAAEALGPENVHAICMPYRTSNPESEAHARLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+A G ++ V+ I +V+ +F QF + + + N +R R +L S ++ Sbjct: 79 AEASGVQFSVVGITPMVDAYF---DQF--PDANNMRRGNKMARERMTVLFDHSALYGGLV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV-IP 461 L TSNK+E+ +GYGTLYGDM+ NP+ DLYKTQV+QL+ EV +P Sbjct: 134 LGTSNKTELLLGYGTLYGDMASALNPIGDLYKTQVWQLSE---------------EVGVP 178 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVE 519 ++EK PSA+L QTD+E L Y +D+++ R+V+ + E V + Sbjct: 179 KPVIEKKPSADLWAGQTDEEELGFTYREVDELLYRMVDQRADTAELVAAGFKQEFVSSIY 238 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + S +KRR PV K++ ++ RD Y Sbjct: 239 SKVQNSHFKRR-LPVIAKVSGRTIDRDFRY 267 >gi|110597954|ref|ZP_01386235.1| NAD+ synthetase [Chlorobium ferrooxidans DSM 13031] gi|110340403|gb|EAT58892.1| NAD+ synthetase [Chlorobium ferrooxidans DSM 13031] Length = 277 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 149/269 (55%), Gaps = 22/269 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L + ++K F V++GLSGGIDSA+ +AV ALG+ENV +M+PY+ +SP+SLE A Sbjct: 21 LSNEIRKFGFRSVVLGLSGGIDSAVVCELAVRALGRENVLALMMPYRSSSPESLEHAELM 80 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + LG + + + I +V+ FS + E + NI +R R L +S ++ Sbjct: 81 IRRLGIRSEEVSITPVVDALFSSVP-----ETELLRRGNIMARTRMVFLYDVSARDGRLV 135 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSNK+E+ +GYGT++GDM+ NPL DLYKTQV G+ LG IP Sbjct: 136 AGTSNKTELLLGYGTMFGDMASAINPLGDLYKTQV---------RGLARHLG-----IPE 181 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETV-RYVEH 520 ++EK+PSA+L Q+D++ L Y +D ++ R++E +E DE V Sbjct: 182 PLIEKAPSADLWEGQSDEDDLGFSYEAVDLLLYRMLEKRMDKAAILREGVDEPFYDRVRK 241 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 ++ ++YK R PV KI+ ++ G D Y Sbjct: 242 MVVRNQYK-RMMPVIAKISGRTPGIDFRY 269 >gi|331090662|ref|ZP_08339511.1| hypothetical protein HMPREF9477_00154 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400076|gb|EGG79727.1| hypothetical protein HMPREF9477_00154 [Lachnospiraceae bacterium 2_1_46FAA] Length = 637 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 123/475 (25%), Positives = 213/475 (44%), Gaps = 61/475 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V DI+ N + + +E G +++F EL ++GY DL F+ ++ Sbjct: 6 VKVAAATPDIRVADISYNTEQICKLIDETVANGAKIVVFPELCVTGYTCGDLFFQDILLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A++ + T D A + VG P + N L+ G II + K LPNYSEF+ Sbjct: 66 RSKEALNEIAEYTKDKDALVFVGVPLAINGKLYNVAAALNRGKIIGLVTKTFLPNYSEFY 125 Query: 125 EKRTFISG--------YSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E RTF +G Y + + F ++ + ICED+W Sbjct: 126 EMRTFQAGPEEARVILYEGEQVAFGPQILFKAKNMEELIVSAEICEDVWSPIPPSIMAAT 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L + +AS + K R +++GQ + + +Y N G+ +L+F G + Sbjct: 186 AGATILVNCSASSETYGKDGYRTSLISGQSARMIAGYVYANAGAGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSE--------QNFMTEWHYD---QQLSQWNYMS-------------D 259 + L ++ ++ + E + QQ+S +++ Sbjct: 246 ENGMVLKESRRYMNDVIYSEIDVHRLLNERRKNTTFQQMSGKHFLVTVPFEIEKEETELT 305 Query: 260 DSASTM-YIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 S S M +IP E+E D C L L+ +Q N V+IG+SGG+DS L + Sbjct: 306 RSISQMPFIPEDEKERD-ECCEEILMIQALGLKKRLQHTNCRNVVIGVSGGLDSTLALLV 364 Query: 312 AV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 AV D LG ++N+ + +P T+ ++ ++A + LG + I + V + F + Sbjct: 365 AVKTFDMLGIDRKNITAVTMPCFGTTDRTYQNACVLIEKLGVTLREISIQEAVRNHFKDI 424 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 Q +E+ EN Q+R R +LM ++N M++ T + SE+++G+ T GD Sbjct: 425 GQ--REDLFDTTYENAQARERTQVLMDIANMENGMVIGTGDMSELALGWATYNGD 477 >gi|197119783|ref|YP_002140210.1| NAD synthetase [Geobacter bemidjiensis Bem] gi|197089143|gb|ACH40414.1| NAD+ synthetase [Geobacter bemidjiensis Bem] Length = 273 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 152/273 (55%), Gaps = 30/273 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD V K K ++GLSGGIDSAL A IA +ALG ENV +PY+ ++P+S A Sbjct: 19 VRDEVCKVGLRKGVLGLSGGIDSALVAYIAAEALGPENVYAYCMPYRTSNPESEAHARLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A++LG + V+ I +V+ +F L + S + N +R R IL S ++ Sbjct: 79 AESLGINFKVIEITGMVDAYFDLYP-----DASNMRRGNKMARERMTILYDHSAEVAGLV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGTL+GDM+ NP+ D+YK+QV++L + +G +P Sbjct: 134 LGTSNKTELLLGYGTLHGDMASALNPIGDIYKSQVWEL---------SEAMG-----VPH 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINN--DQEYNDETVR 516 ++EK PSA+L QTD++ L Y D+++ R+V+ + E I + ++ D R Sbjct: 180 EVIEKKPSADLWAGQTDEQELGFTYRDADELLYRMVDQRMSREELIAAGFEAQFIDNVHR 239 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 V+ GS +KRR P+ K++ ++ RD Y Sbjct: 240 KVQ----GSHFKRR-LPIIAKVSNRTIDRDFRY 267 >gi|193215470|ref|YP_001996669.1| NAD synthetase [Chloroherpeton thalassium ATCC 35110] gi|193088947|gb|ACF14222.1| NAD+ synthetase [Chloroherpeton thalassium ATCC 35110] Length = 273 Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 147/269 (54%), Gaps = 30/269 (11%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K F +V++GLSGGIDSA+ ++A ALGKENV +M+PYK ++P SL A K L Sbjct: 21 VKKFGFKRVVLGLSGGIDSAVSCSLATKALGKENVLAVMMPYKTSNPDSLNHATLLVKQL 80 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G +V I V+ +F + + S + NI +R R L +S A+++ TS Sbjct: 81 GIGSEVAEITPFVDAYFKQVP-----DASNLRKGNIMARARMMTLYDISARDAALVVGTS 135 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NK+E+ +GYGTL+GDM+ NP+ DLYKT ++ LA +P ++ Sbjct: 136 NKTELLLGYGTLFGDMASAINPIGDLYKTHIWALARHLE--------------VPEPLIT 181 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVR-----YVEH 520 K PSA+L Q+D++ L Y +D+++ +VE S D E ++ + V+ Sbjct: 182 KKPSADLWEGQSDEDELGFTYQEVDELLYFMVEERLS----DAEILEKGISKVFLDRVKR 237 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 L+ ++YK R PV KI++++ G D Y Sbjct: 238 LVVRNQYK-RMGPVIAKISSRTLGIDFRY 265 >gi|256027925|ref|ZP_05441759.1| NAD synthetase [Fusobacterium sp. D11] gi|289765872|ref|ZP_06525250.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. D11] gi|289717427|gb|EFD81439.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. D11] Length = 258 Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 94/265 (35%), Positives = 144/265 (54%), Gaps = 22/265 (8%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +N V LR+ +K F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P S Sbjct: 12 HNELVEFLRENFKKAGFSKAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDS 71 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L A + L + I D+++ +F ++E S + N +R R +IL S Sbjct: 72 LNHAKLVIEDLKINSKTIEITDMIDAYFK-----NEKEASSLRMGNKMARERMSILFDYS 126 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + A+++ TSNK+EI +GY T +GD + NP+ DLYKT ++ L+ + Sbjct: 127 SKENALVVGTSNKTEIYLGYSTQFGDSACALNPIGDLYKTNIWDLSRYLK---------- 176 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDE 513 IP ++EK PSA+L QTD++ + Y D ++ R++E ++ E +N + Sbjct: 177 ----IPNELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKTVEEVLAEGFNKD 232 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKI 538 V + + SEYKRR P+ KI Sbjct: 233 LVDNIVRRMNRSEYKRRM-PLIAKI 256 >gi|19704537|ref|NP_604099.1| NAD synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328416|ref|ZP_06870942.1| NAD(+) synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|25090755|sp|Q8REA7|NADE_FUSNN RecName: Full=NH(3)-dependent NAD(+) synthetase gi|19714821|gb|AAL95398.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154490|gb|EFG95282.1| NAD(+) synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 258 Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 93/265 (35%), Positives = 144/265 (54%), Gaps = 22/265 (8%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +N V LR+ +K F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P S Sbjct: 12 HNELVEFLRENFKKAGFSKAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDS 71 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L A + L + I D+++ +F ++E + + N +R R +IL S Sbjct: 72 LNHAKLVVEDLKINSKTIEITDMIDAYFK-----NEKEATSLRMGNKMARERMSILFDYS 126 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + A+++ TSNK+EI +GY T +GD + NP+ DLYKT ++ L+ + Sbjct: 127 SKENALVVGTSNKTEIYLGYSTQFGDAACALNPIGDLYKTNIWDLSRYLK---------- 176 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDE 513 IP ++EK PSA+L QTD++ + Y D ++ R++E ++ E +N + Sbjct: 177 ----IPNELIEKKPSADLWEGQTDEQEMGLTYKEADQVMYRLLEENKTVEEVLAEGFNKD 232 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKI 538 V + + SEYKRR P+ KI Sbjct: 233 LVDNIVRRMNRSEYKRRM-PLIAKI 256 >gi|254302954|ref|ZP_04970312.1| NAD(+) synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323146|gb|EDK88396.1| NAD(+) synthase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 258 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 141/258 (54%), Gaps = 22/258 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ +K F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P SL A Sbjct: 19 LRESFKKVGFSKAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + LG + I D+++ +F ++E + + N +R R +IL S+ A++ Sbjct: 79 VEDLGINSKTIEITDMIDAYFK-----NEKEATSLRMGNKMARERMSILFDYSSKENALV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+EI +GY T +GD + NP+ DLYKT ++ L+ + IP Sbjct: 134 VGTSNKTEIYLGYSTQFGDSACALNPIGDLYKTNIWDLSRYLK--------------IPN 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEH 520 ++EK PSA+L QTD++ + Y D ++ R++E + E +N + V + Sbjct: 180 ELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKKVEEVLAEGFNKDLVDNIVR 239 Query: 521 LLYGSEYKRRQAPVGTKI 538 + SEYKRR P+ KI Sbjct: 240 RMNRSEYKRRM-PLIAKI 256 >gi|237744259|ref|ZP_04574740.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 7_1] gi|229431488|gb|EEO41700.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 7_1] Length = 258 Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 93/265 (35%), Positives = 144/265 (54%), Gaps = 22/265 (8%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +N V LR+ +K F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P S Sbjct: 12 HNELVEFLRENFKKAGFSKAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDS 71 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L A + L + I D+++ +F ++E + + N +R R +IL S Sbjct: 72 LNHAKLVVEDLKINSKTIEITDMIDAYFK-----NEKEATSLRMGNKMARERMSILFDYS 126 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + A+++ TSNK+EI +GY T +GD + NP+ DLYKT ++ L+ + Sbjct: 127 SKENALVVGTSNKTEIYLGYSTQFGDSACALNPIGDLYKTNIWDLSRYLK---------- 176 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDE 513 IP ++EK PSA+L QTD++ + Y D ++ R++E ++ E +N + Sbjct: 177 ----IPNELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKTVEEVLAEGFNKD 232 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKI 538 V + + SEYKRR P+ KI Sbjct: 233 LVDNIVRRINRSEYKRRM-PLIAKI 256 >gi|87309963|ref|ZP_01092096.1| NH(3)-dependent NAD(+) synthetase [Blastopirellula marina DSM 3645] gi|87287209|gb|EAQ79110.1| NH(3)-dependent NAD(+) synthetase [Blastopirellula marina DSM 3645] Length = 666 Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 154/587 (26%), Positives = 241/587 (41%), Gaps = 91/587 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +K+A A +N D GN + A EEAN ++ EL I+GY ED Sbjct: 1 MKLVKVAAAVVNQTPLDWQGNCDRILAAIEEANLNEASILCLPELCITGYGCEDAFLSAD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + + T D + +G P + + N V +L G I+ K NL Sbjct: 61 VQRTALAMLHMIAPRTRD--MFVTLGLPMSYRGVLYNVVAVLADGEIVGFVPKQNLAGDG 118 Query: 122 EFHEKRTF------------ISG--YSNDPIVFR--DIRLGILICEDIWKNSNICKHLKK 165 +E R F + G Y +VFR D +G+ ICED W + Sbjct: 119 IHYEPRWFKPWPEGLRAEVELEGRTYPFGDLVFRIDDALIGLEICEDAWVADRPGSRQAR 178 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCFD 224 G + + + +AS + K + R V H +Y N +G + I+DG + Sbjct: 179 IGVDIILNPSASHFAFGKHEIRQRFVLEGSRAFHTSYVYANLLGNEAGRAIYDGDAMIAS 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY---------IPLQ----- 270 G + LA + +T D L++ D+ Y +P Sbjct: 239 GGRMLAIGSRLSFHAYLVTTAVIDLDLTRMYRARSDAFRPDYQGSLQPVVRVPFNLPEIE 298 Query: 271 -----------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA----LCA 309 ++E A L L DY++K++ ++ LSGG DSA LC+ Sbjct: 299 PEPVHFVRAAWETGSDTKKEEFTRAVALGLYDYLRKSHSRGYVVSLSGGADSAATALLCS 358 Query: 310 ---AIAVDALG----KENVQTIMLPYKYTSPQSLEDAAA-CAKALGCK------------ 349 +A LG KE++Q I + S +L A C C Sbjct: 359 LSLRMAAKELGFGALKESLQFIPAAKEAESIDALVTATLDCVYQATCNSGETTLQAAQQI 418 Query: 350 -------YDVLPIHDLVNHFFSLMSQFLQEEPSG----IVAENIQSRIRGNILMALSNHS 398 + I LV + L +Q L S I +NIQ+R R + L+N Sbjct: 419 AAAIHANFHHFQIDRLVELYTELGAQALGRPLSWATDDIALQNIQARTRSPSVWMLANLR 478 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 ++LL+TSN+SE +VGY T+ GD SGG P+ + K + Q +W G +G GP E Sbjct: 479 GSLLLSTSNRSEAAVGYATMDGDTSGGLCPIAGIDKAFLRQWLNWMEITG-PAGFGPTPE 537 Query: 459 VIPPSILEKSPSAELRPH---QTDQESLPPYPILDDIIKRIVENEES 502 + +I ++P+AELRP QTD++ L PY +LD I + + +++S Sbjct: 538 L--NAINVQAPTAELRPQESKQTDEDDLMPYELLDAIERAAIRDKQS 582 >gi|222054594|ref|YP_002536956.1| NAD+ synthetase [Geobacter sp. FRC-32] gi|221563883|gb|ACM19855.1| NAD+ synthetase [Geobacter sp. FRC-32] Length = 274 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 150/271 (55%), Gaps = 26/271 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ VQK + ++GLSGGIDSAL A +A +ALG ENV +PY+ ++P+S A Sbjct: 20 IREEVQKIGVRRAVLGLSGGIDSALVAYLAAEALGAENVYACTMPYRTSNPESEAHARLI 79 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG Y V+ I +++ +F QF + S + N +R R IL S A++ Sbjct: 80 AEDLGINYQVIEITPMIDAYF---QQF--PDASNMRRGNKMARERMTILYDHSAAHGALV 134 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGTL+GDM+ N + D+YKTQV+QL + +G +P Sbjct: 135 LGTSNKTELLLGYGTLFGDMASALNAIGDIYKTQVWQL---------SEAMG-----VPR 180 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETVRYV 518 ++EK PSA+L QTD++ L Y +D+++ +V+ N + D+ + + V Sbjct: 181 EVIEKKPSADLWAGQTDEQELGFTYREVDELLYWMVDHRCNRHELL--DKGFAATFIDTV 238 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + S +KRR PV K++ ++ RD Y Sbjct: 239 SAKVQNSHFKRRM-PVIAKVSNRTIDRDFRY 268 >gi|34764278|ref|ZP_00145121.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885949|gb|EAA23282.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 258 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 93/265 (35%), Positives = 144/265 (54%), Gaps = 22/265 (8%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +N V LR+ +K F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P S Sbjct: 12 HNELVEFLRENFKKAGFSKAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDS 71 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L A + L + I D+++ +F +++ S + N +R R +IL S Sbjct: 72 LNHAKLVVEDLKINAKTIEITDMIDAYFK-----NEKDASSLRMGNKMARERMSILFDYS 126 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + A+++ TSNK+EI +GY T +GD + NP+ DLYKT ++ L+ + Sbjct: 127 SKENALVVGTSNKTEIYLGYSTQFGDSACALNPIGDLYKTNIWDLSRYLK---------- 176 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDE 513 IP ++EK PSA+L QTD++ + Y D ++ R++E ++ E +N + Sbjct: 177 ----IPNELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKTVEEILAEGFNKD 232 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKI 538 V + + SEYKRR P+ KI Sbjct: 233 LVDNIVRRMNKSEYKRRM-PLIAKI 256 >gi|311747673|ref|ZP_07721458.1| putative glutamine-dependent NAD(+) synthetase [Algoriphagus sp. PR1] gi|126575660|gb|EAZ79970.1| putative glutamine-dependent NAD(+) synthetase [Algoriphagus sp. PR1] Length = 614 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 145/567 (25%), Positives = 242/567 (42%), Gaps = 94/567 (16%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KI+ A +N D +GN+ + RA +EA + +++ EL I+GY EDL Sbjct: 1 MTSPIKISAATVNQTPLDWSGNLDRIIRAVKEAKSEKAEILCLPELAITGYGSEDLFLSY 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q S + L + G + VG P + Q+ V N+V +++ + K + Sbjct: 61 WFPQKALSQLSKLIPECK--GITVAVGLPIRVQDKVYNTVAVIENAELKGFVAKQFMAID 118 Query: 121 SEFHEKRTFISGYSNDPIVF----------------RDIRLGILICEDIWK-NSNICKHL 163 +E R F +N+ I + I G ICED W+ N L Sbjct: 119 GVHYEFRWFTPWKANEVIQVEFEGKSFPLGDLTFHHKGIHYGFEICEDAWRGNERPGYRL 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG---- 218 K + + +F+ +AS + K + R E++ Y N +G + +IFDG Sbjct: 179 KDRKVDLIFNPSASHFAMGKSQLRVELIEESSKIFDCYYCYANLLGNEAGRMIFDGEIML 238 Query: 219 --ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADY 276 + + L+FQ F ++F Y+ + + P+ +E ++ Sbjct: 239 GKSGVVISRNELLSFQ--DFQVRSF--------------YLKPEVQNLQ--PVISKEKEF 280 Query: 277 -NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--------- 326 A L+L DY++K+ ++ LSGG DS+ AI V + K ++ + L Sbjct: 281 AQAASLALFDYLRKSKSKGFVLSLSGGADSS-TIAILVSEMVKRGIKDLGLLLFCQKAGI 339 Query: 327 ---------PYKY---------------TSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 P KY +S + A + A+++G + I + V + Sbjct: 340 PLPPKEITEPEKYLVGKLLTTAYQGTKNSSDDTFNSAKSLAESIGATFYQWTIDEEVKTY 399 Query: 363 FSLMSQF----LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + Q L E I +NIQ+R R I+ L+N + A+LL+TSN+SE VGY T+ Sbjct: 400 TEKIEQAIGRKLTWEQDDITLQNIQARSRSPIIWMLANINNALLLSTSNRSEGDVGYATM 459 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP--- 475 GD SG +P+ + K + Q SW + GL + + P+AELRP Sbjct: 460 DGDTSGSISPIAAVDKFFILQWLSWAEKNLDQPGLKWVNSL--------QPTAELRPLER 511 Query: 476 HQTDQESLPPYPILDDIIKRIVENEES 502 QTD++ L PY ++ +I K + + S Sbjct: 512 TQTDEKDLMPYSVILEIEKLAIRDRRS 538 >gi|149194281|ref|ZP_01871378.1| NAD(+) synthase [Caminibacter mediatlanticus TB-2] gi|149135456|gb|EDM23935.1| NAD(+) synthase [Caminibacter mediatlanticus TB-2] Length = 272 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 148/264 (56%), Gaps = 26/264 (9%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 + K K I GLSGGIDSA+ A +A ALGK N + MLP +++S S+EDA K Sbjct: 28 ITKTGLKKGICGLSGGIDSAVVAVLAKKALGK-NFKAFMLPSQFSSSSSIEDAKELCKKF 86 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 +Y+++ I L+N + + + N +R+R IL S A+++ TS Sbjct: 87 DIEYEIISIEPLLNAY---------KIEDKVRLGNFSARMRMAILYDKSAELNALVIGTS 137 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE+ +GYGTLYGD++ NP+ DLYK+++F+ A + LG +P SI++ Sbjct: 138 NKSELMLGYGTLYGDLASALNPIGDLYKSEIFEFAKY---------LG-----VPESIIK 183 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGS 525 K PSA+L Q+D+ L Y +D +++ V+N + Q+Y+ + V +V +Y + Sbjct: 184 KPPSADLWQGQSDEAELGYSYSEIDPVLEDFVDNRATKKELLQKYDKDLVEFVLKKVYQN 243 Query: 526 EYKRRQAPVGTKITAKSFGRDRLY 549 ++KR+ P+ K+ +++ G D LY Sbjct: 244 QFKRK-LPIIAKLKSRTIGHDFLY 266 >gi|229496094|ref|ZP_04389816.1| glutamine-dependent NAD+ synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316990|gb|EEN82901.1| glutamine-dependent NAD+ synthetase [Porphyromonas endodontalis ATCC 35406] Length = 647 Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 159/620 (25%), Positives = 262/620 (42%), Gaps = 86/620 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+ + +A+ QG++++ F EL ++GY DL + + Sbjct: 6 VKVAAAVPYVKVADCYYNVERISEMVHQADAQGVEIVTFPELSVTGYTCGDLFLQPFLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++A+ L DT D ++VG P + +E + NS V+ G+I+ K LPNY EF Sbjct: 66 EANAALCQLVRDTADTRTLVIVGMPVRVEEKLFNSAVVFQQGHILGAIPKTYLPNYREFQ 125 Query: 125 EKRTFIS-----------GYSNDP----IVFRDIR--LGILICEDIWKNSNICKHLKKQG 167 EKR F G P I+FR R +GI ICED+W L G Sbjct: 126 EKRWFSPSDVLQYKTVRIGEHTVPIGRNILFRSGRVGIGIEICEDMWTPYTPGTRLSLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K I++G S +YV+ G+ +L++ G +F + Sbjct: 186 AHIIFNLSASNENAGKHNYLRSIISGLSSQGLCGYVYVSCGYGESSTDLVYTGKAFISE- 244 Query: 226 QQQLAFQMKHFSEQNFM-----------TEW-----------HYDQ-QLSQWNYM--SDD 260 ++ +MK F M TE H+ Q +L++ + S++ Sbjct: 245 IGKIVKEMKRFEYCERMIVSDIDVSHVQTERLLNSSFKSAVSHFTQEELTEIPFALRSEE 304 Query: 261 SASTMYIPLQEE-------------EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++ + P++ E + V L ++ +IG+SGG+DS L Sbjct: 305 ESAPVDRPIERNPFMPTGVDPDERCEEMFQIQVCGLVQRLRHMKAEHAVIGISGGLDSTL 364 Query: 308 CAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V A L N+ + +P TS ++ E+A + LG + I + Sbjct: 365 ALLVTVRAFDILGLPHSNIIGVTMPGFGTSTRTRENAHKMMRHLGVTLQEIDITEACMQH 424 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F+ + E EN+Q+R R +LM ++N A ++ T + SEI++G+ T GD Sbjct: 425 FAAIGH--DPEVHDTTYENVQARERTQLLMDIANRYNAPVIGTGDLSEIALGWCTYNGDH 482 Query: 423 SGGFNPLKDLYKTQVFQLASWRN---SHGITSGLGPLTEV----IPPSILEKSPSAELRP 475 ++ + KT V + W SHG L +V I P ++ E P Sbjct: 483 MSMYSVNATVAKTSVALIIDWHARVLSHGDEVLKKTLLDVVDTPISPELIPGVNGDE--P 540 Query: 476 HQTDQESLPPYPILDDIIKRIV--ENEESFINNDQEYNDETV-------RYVEHL---LY 523 HQ QE++ PY + D I + +N+ S I E + RY+ + Sbjct: 541 HQKTQEAIGPYELHDFFIYHFLFKKNQPSKIFYLARVAFEGIYPPSVIKRYMLLFFRRFF 600 Query: 524 GSEYKRRQAPVGTKITAKSF 543 +YKR P G K+ A S Sbjct: 601 SQQYKRNCMPDGPKVGAVSL 620 >gi|78224058|ref|YP_385805.1| NAD synthetase [Geobacter metallireducens GS-15] gi|78195313|gb|ABB33080.1| NH(3)-dependent NAD(+) synthetase [Geobacter metallireducens GS-15] Length = 271 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 97/284 (34%), Positives = 153/284 (53%), Gaps = 28/284 (9%) Query: 274 ADYNACVLS------LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 AD N +L +R+ V K K ++GLSGGIDSAL A +A +ALG EN+ ++P Sbjct: 2 ADVNVKLLRRILVGFIREEVTKVGIRKAVLGLSGGIDSALVAYLAAEALGPENIHACIMP 61 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 Y+ ++P+S A A+ LG Y V+ I +++ +FS + + N +R R Sbjct: 62 YRTSNPESEAHARLAAEHLGIHYQVIDITPMIDAYFSRFP-----DADSMRRGNKMARER 116 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 IL S A++L TSNK+E+ +GYGTLYGDM+ NP+ D+YKTQV+QL Sbjct: 117 MTILYDHSAALPALVLGTSNKTELLLGYGTLYGDMASALNPIGDIYKTQVWQL------- 169 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINN 506 + +G +P I+EK PSA+L QTD++ L Y +D ++ +V+ S Sbjct: 170 --SEEMG-----VPRDIIEKQPSADLWAGQTDEQELGFTYREVDKLLYSMVDQRMSREEL 222 Query: 507 DQE-YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 ++ + + + V + S +KRR P+ K++ ++ RD Y Sbjct: 223 EKNGFAADFIATVSARIQNSHFKRR-LPIIAKVSNRTIDRDFRY 265 >gi|39995758|ref|NP_951709.1| NAD synthetase [Geobacter sulfurreducens PCA] gi|39982522|gb|AAR33982.1| NAD+ synthetase [Geobacter sulfurreducens PCA] gi|298504768|gb|ADI83491.1| NAD+ synthetase [Geobacter sulfurreducens KN400] Length = 273 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/271 (34%), Positives = 150/271 (55%), Gaps = 26/271 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ V K K ++GLSGGIDSAL A +A +ALG +NV I++PY+ ++P+S A Sbjct: 19 LREEVHKVGVRKAVLGLSGGIDSALVAFLAAEALGPDNVHAIIMPYRTSNPESEAHARLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG ++V+ I +V+ +F+ + + N +R R IL S A++ Sbjct: 79 AEQLGINHEVIEITPMVDAYFTRFP-----DADNMRRGNKMARERMTILYDHSAALGALV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGTLYGDM+ NP+ D+YKTQV+QL+ T +P Sbjct: 134 LGTSNKTELLLGYGTLYGDMASALNPIGDIYKTQVWQLSE--------------TMGVPR 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETVRYV 518 I+EK PSA+L QTD++ L Y +D+++ +++ N + + + + + V Sbjct: 180 QIIEKKPSADLWAGQTDEQELGFTYREVDELLYCMIDLRMNRLELLA--RGFVADFIDTV 237 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + S +KRR PV K++ ++ RD Y Sbjct: 238 SGKVQNSHFKRR-LPVIAKVSNRTIDRDFRY 267 >gi|110638806|ref|YP_679015.1| glutamine-dependent NAD(+) synthetase [Cytophaga hutchinsonii ATCC 33406] gi|110281487|gb|ABG59673.1| glutamine-dependent NAD(+) synthetase [Cytophaga hutchinsonii ATCC 33406] Length = 626 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 135/573 (23%), Positives = 240/573 (41%), Gaps = 96/573 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++I A +N D N+ A EEA ++++ EL I+GY EDL Sbjct: 1 MSTIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLFLTDW 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + D + +G P + N V +++ G + K L N Sbjct: 61 VAETAIEYCFEIAASCTD--ITVSLGLPMRIAGITYNCVCLVENGIVKGFSAKQFLANEG 118 Query: 122 EFHEKRTFISGYSNDPIVF----------------RDIRLGILICEDIWKNSNICKHLKK 165 +E R F + N F +D R+G ICED W+ + + Sbjct: 119 VHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLYNVKDARIGFEICEDAWRTDRVGIRHYE 178 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 +GA + + +AS + K R+++V G +Y N +G + +DG Sbjct: 179 KGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANLLGNE------AGRMIYDG 232 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-----YNACV 280 + +A + K + ++ + + + ++ DSA T L +++ + + A Sbjct: 233 EVLIAHKGKLIQRNDRLSFKNVNLIYAD---IATDSAETPETVLTQDDLEKEFEFWEATS 289 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-------------LGKENVQTIM-- 325 L L DY++K+ ++ LSGG DS+ CA + + L K N++T+ Sbjct: 290 LGLFDYMRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDL 349 Query: 326 -----LPYK--------------YTSPQSLED-----AAACAKALGCKYDVLPIHDLVNH 361 LP++ Y S ++ D A A+++G + + + + Sbjct: 350 PALQHLPFEEQAKKITAVFLTTAYQSTRNSGDETYTSAKTLAESIGATFYNWSVDEEIEQ 409 Query: 362 FFSLMSQFLQE----EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + ++ E I +NIQ+R R I+ L+N +A+L+TTSN+SE VGY T Sbjct: 410 YKATIENVIERPLTWEKDDITLQNIQARGRAPIIWMLTNVKQALLITTSNRSEGDVGYAT 469 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASW----RNSHGITSGLGPLTEVIPPSILEK-SPSAE 472 + GD +GG P+ + K + W RN HG+ I+ K +P+AE Sbjct: 470 MDGDTAGGIAPIAGVDKDFIRSWLRWAEKNRNQHGL-------------HIVNKLAPTAE 516 Query: 473 LRPH---QTDQESLPPYPILDDIIKRIVENEES 502 LRP QTD+ L PY +L I ++ ++ S Sbjct: 517 LRPSEYTQTDERDLMPYDVLARIERKAIKERLS 549 >gi|237742199|ref|ZP_04572680.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 4_1_13] gi|229429847|gb|EEO40059.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 4_1_13] Length = 258 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/265 (34%), Positives = 143/265 (53%), Gaps = 22/265 (8%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +N V LR+ +K F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P Sbjct: 12 HNELVEFLRENFKKAGFSKAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDG 71 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L A + L + I D+++ +F +++ S + N +R R +IL S Sbjct: 72 LNHAKLVVEDLKINAKTIEITDMIDAYFK-----NEKDASSLRMGNKMARERMSILFDYS 126 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + A+++ TSNK+EI +GY T +GD + NP+ DLYKT ++ L+ + Sbjct: 127 SKENALVVGTSNKTEIYLGYSTQFGDSACALNPIGDLYKTNIWDLSRYLK---------- 176 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDE 513 IP ++EK PSA+L QTD++ + Y D ++ R++E ++ E +N + Sbjct: 177 ----IPNELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKTVEEVLAEGFNKD 232 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKI 538 V + + SEYKRR P+ KI Sbjct: 233 LVDNIVRRMNRSEYKRRM-PLIAKI 256 >gi|212550475|ref|YP_002308792.1| glutamine-dependent amidohydrolase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548713|dbj|BAG83381.1| glutamine-dependent amidohydrolase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 641 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 148/616 (24%), Positives = 264/616 (42%), Gaps = 90/616 (14%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI QL V D N + + EAN Q + ++ F EL IS Y DL +++ I Sbjct: 8 RIGAAIPQLK--VADCEFNAQQVAKHITEANDQEVQVVCFPELSISSYTCGDLFLQRTLI 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + L + + +VG P + + N V+ G I + K+ LPNYSEF Sbjct: 66 EGAEKVLVELLHNMQNLPICFIVGTPIEYNSKLYNCAVVCQHGKIKGIVPKVYLPNYSEF 125 Query: 124 HEKRTFISGYSNDP---IVFRD-----------------IRLGILICEDIWKNSNICKHL 163 +EKR F S YSND I + D I+ I ICED+W + Sbjct: 126 YEKRWFES-YSNDESTIITYADNTVLFGTNLLFSLDLDLIKFSIEICEDLWSVIPPSSYH 184 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA+ +F+L+AS K + +++ Q + H +Y + G+ +L++ G ++ Sbjct: 185 AIAGAQLIFNLSASDELIGKQQYVKSLISQQSARCHTAYVYTSAGFGESTTDLVYSGNAY 244 Query: 222 CFD-GQQQLAFQMKHFSEQNFMTEWHYD---------------------QQLSQWNYMSD 259 ++ G+ + F EQ + E YD + ++ Y + Sbjct: 245 VYENGKLLIESNRFQFHEQLIVCEIDYDLLNSERRKNTSFIGQPTTNNYKHIAIHQYPTI 304 Query: 260 DSA-------STMYIPLQEEEAD-----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 +S ST +IPL + + ++ + L + N +IIG+SGG+DS L Sbjct: 305 NSPKLKRTINSTPFIPLSKNHNESCKEIFSIQISGLAKRIIHTNAQSLIIGVSGGLDSTL 364 Query: 308 CAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V D LG ++ V + +P TS ++ +A + +L + + I N Sbjct: 365 ALLVCVKTIDKLGLSRKMVCGVTMPCFGTSSRTYLNALSLMTSLEIRIRKIDITKACNQH 424 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + ++ + EN+Q+R R ILM L+N +++ TS+ SE+++G+ T GD Sbjct: 425 FKDIGH--GDDIHDLTYENVQARERTQILMDLANQLNGIVIGTSDMSELALGWTTYNGDH 482 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------- 475 + + KT V L W + + L +++ I+ S EL P Sbjct: 483 MSMYGINAGIPKTLVCYLVKWIAA----TQLNESDKIVLSDIISTPISPELLPIDNKKQQ 538 Query: 476 -HQTDQESLPPYPILDDIIKRIVEN-----------EESFINN-DQEYNDETVRYVEHLL 522 Q+ ++ L PY + D + I+ + + +F + +++ + +R Sbjct: 539 IAQSTEDILGPYELHDFFLYHILRHGFTPSKIYFLAKHAFTDTYSEDFILKWMRVFYKRF 598 Query: 523 YGSEYKRRQAPVGTKI 538 + +++KR P G KI Sbjct: 599 FSNQFKRNCIPDGPKI 614 >gi|294785222|ref|ZP_06750510.1| NAD+ synthetase [Fusobacterium sp. 3_1_27] gi|294486936|gb|EFG34298.1| NAD+ synthetase [Fusobacterium sp. 3_1_27] Length = 258 Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 92/265 (34%), Positives = 144/265 (54%), Gaps = 22/265 (8%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +N V LR+ +K F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P S Sbjct: 12 HNELVEFLRENFKKAGFSKAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDS 71 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L A + L + I ++++ +F +++ S + N +R R +IL S Sbjct: 72 LNHAKLVVEDLKINAKTIEITNMIDAYFK-----NEKDASSLRMGNKMARERMSILFDYS 126 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + A+++ TSNK+EI +GY T +GD + NP+ DLYKT ++ L+ + Sbjct: 127 SKENALVVGTSNKTEIYLGYSTQFGDSACALNPIGDLYKTNIWDLSRYLK---------- 176 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDE 513 IP ++EK PSA+L QTD++ + Y D ++ R++E ++ E +N + Sbjct: 177 ----IPNELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLEENKTVEEVLAEGFNKD 232 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKI 538 V + + SEYKRR P+ KI Sbjct: 233 LVDNIVRRMNRSEYKRRM-PLIAKI 256 >gi|313682703|ref|YP_004060441.1| nh(3)-dependent nad(+) synthetase [Sulfuricurvum kujiense DSM 16994] gi|313155563|gb|ADR34241.1| NH(3)-dependent NAD(+) synthetase [Sulfuricurvum kujiense DSM 16994] Length = 266 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 94/267 (35%), Positives = 150/267 (56%), Gaps = 27/267 (10%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K KV++GLSGGIDSA+ A +A A G +++ I +P Y+S SL+DA Sbjct: 19 VRKTGLQKVVVGLSGGIDSAVVAVLAHRAFG-DDLLCIKMPSHYSSMSSLDDADELCGTF 77 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G + + I ++ + S + S + N+ +R+R L +S A++L TS Sbjct: 78 GLRSETYSIEPMLKAYES-------SDMSPLRIGNLSARLRMVTLFDISAREGALVLGTS 130 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE+ +GYGTL+GD++ NP+ DLYKT+VF+LA + LG +P SI++ Sbjct: 131 NKSELMLGYGTLHGDLASAINPIGDLYKTEVFELARY---------LG-----VPSSIID 176 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLY 523 K PSA+L Q+D+ + PY LD ++KR VE + I +D E N + V + +Y Sbjct: 177 KPPSADLWAGQSDEAEIGYPYADLDRVLKRYVEERHTVEEIVSDGE-NSQLVDMIVTRIY 235 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYP 550 +++KR+ P+ K+T+++ D YP Sbjct: 236 KNQFKRKM-PLIAKLTSRTPNHDFNYP 261 >gi|256845472|ref|ZP_05550930.1| NAD+ synthetase [Fusobacterium sp. 3_1_36A2] gi|256719031|gb|EEU32586.1| NAD+ synthetase [Fusobacterium sp. 3_1_36A2] Length = 258 Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 92/266 (34%), Positives = 144/266 (54%), Gaps = 24/266 (9%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +N V LR+ +K F K ++GLSGGIDSAL A + DALGKENV IM+PYK ++P S Sbjct: 12 HNELVEFLRENFKKAGFSKAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDS 71 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 L A + L + I ++++ +F +++ S + N +R R +IL S Sbjct: 72 LNHAKLVVEDLKINAKTIEITNMIDAYFK-----NEKDASSLRMGNKMARERMSILFDYS 126 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + A+++ TSNK+EI +GY T +GD + NP+ DLYKT ++ L+ + Sbjct: 127 SKENALVVGTSNKTEIYLGYSTQFGDSACALNPIGDLYKTNIWDLSRYLK---------- 176 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINN--DQEYND 512 IP ++EK PSA+L QTD++ + Y D ++ R++E E + + +N Sbjct: 177 ----IPNELIEKKPSADLWEGQTDEQEMGLTYKEADQVLYRMLE-ENKIVEEILAEGFNK 231 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKI 538 + V + + SEYKRR P+ KI Sbjct: 232 DLVDNIVRRINRSEYKRRM-PLIAKI 256 >gi|18976470|ref|NP_577827.1| NAD synthetase [Pyrococcus furiosus DSM 3638] gi|25090761|sp|Q8U4I9|NADE_PYRFU RecName: Full=NH(3)-dependent NAD(+) synthetase gi|18892011|gb|AAL80222.1| NH(3)-dependent NAD+ synthetase [Pyrococcus furiosus DSM 3638] Length = 257 Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 154/267 (57%), Gaps = 24/267 (8%) Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 ++ V L +++++N V+IG+SGG+DSA A +A ALGK+ + +++PY + Sbjct: 5 NFEKVVTRLVEFIKENAKQGVVIGISGGVDSATVAYLATKALGKDKILGLIMPY--YENK 62 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +EDA A+ LG +Y ++ I +V+ S + L + G NI +R+R +L + Sbjct: 63 DVEDAKLVAENLGIRYKIINIKPIVDTIQSSLDVALDRKSLG----NIMARVRMVLLYSY 118 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +N ++L TSN+SE GY T +GD + + PL ++YKT+V+++A +G Sbjct: 119 ANSLGRLVLGTSNRSEFLTGYFTKWGDGASDYAPLINIYKTEVWEVARI---------IG 169 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESF--INNDQEYN 511 +P SI+EK PSA L QTD++ L Y +LD+++ R+V+ + S I N+ + Sbjct: 170 -----VPQSIVEKKPSAGLWEGQTDEDELGISYKLLDELLWRLVDLKMSKEEIANELNVS 224 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKI 538 +E V +VE L+ SE+KRR P+G K+ Sbjct: 225 EEIVEHVEKLVKNSEHKRR-LPIGPKV 250 >gi|256032930|pdb|3ILV|A Chain A, Crystal Structure Of A Glutamine-Dependent Nad(+) Synthetase From Cytophaga Hutchinsonii Length = 634 Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 135/569 (23%), Positives = 235/569 (41%), Gaps = 96/569 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L ++I A +N D N+ A EEA ++++ EL I+GY EDL Sbjct: 3 LSTIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLFLTDW 62 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + D + +G P + N V +++ G + K L N Sbjct: 63 VAETAIEYCFEIAASCTD--ITVSLGLPXRIAGITYNCVCLVENGIVKGFSAKQFLANEG 120 Query: 122 EFHEKRTFISGYSNDPIVF----------------RDIRLGILICEDIWKNSNICKHLKK 165 +E R F + N F +D R+G ICED W+ + + Sbjct: 121 VHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLYNVKDARIGFEICEDAWRTDRVGIRHYE 180 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 +GA + + +AS + K R+++V G +Y N +G + +DG Sbjct: 181 KGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANLLGNE------AGRXIYDG 234 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-----YNACV 280 + +A + K + ++ + + + ++ DSA T L +++ + + A Sbjct: 235 EVLIAHKGKLIQRNDRLSFKNVNLIYAD---IATDSAETPETVLTQDDLEKEFEFWEATS 291 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-------------LGKENVQTIM-- 325 L L DY +K+ ++ LSGG DS+ CA + L K N +T+ Sbjct: 292 LGLFDYXRKSRSKGFVLSLSGGADSSACAIXVAEXIRKGLKELGLTAFLQKSNXETLFDL 351 Query: 326 -----LPYK--------------YTSPQSLED-----AAACAKALGCKYDVLPIHDLVNH 361 LP++ Y S ++ D A A+++G + + + + Sbjct: 352 PALQHLPFEEQAKKITAVFLTTAYQSTRNSGDETYTSAKTLAESIGATFYNWSVDEEIEQ 411 Query: 362 FFSLMSQFLQE----EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + ++ E I +NIQ+R R I+ L+N +A+L+TTSN+SE VGY T Sbjct: 412 YKATIENVIERPLTWEKDDITLQNIQARGRAPIIWXLTNVKQALLITTSNRSEGDVGYAT 471 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASW----RNSHGITSGLGPLTEVIPPSILEK-SPSAE 472 GD +GG P+ + K + W RN HG+ I+ K +P+AE Sbjct: 472 XDGDTAGGIAPIAGVDKDFIRSWLRWAEKNRNQHGL-------------HIVNKLAPTAE 518 Query: 473 LRPH---QTDQESLPPYPILDDIIKRIVE 498 LRP QTD+ L PY +L I ++ ++ Sbjct: 519 LRPSEYTQTDERDLXPYDVLARIERKAIK 547 >gi|258650735|ref|YP_003199891.1| NAD+ synthetase [Nakamurella multipartita DSM 44233] gi|258553960|gb|ACV76902.1| NAD+ synthetase [Nakamurella multipartita DSM 44233] Length = 679 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 143/563 (25%), Positives = 242/563 (42%), Gaps = 85/563 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + + D N A + + QG+ + LF EL ++GY +DL+ +++ + A Sbjct: 13 RVAACTADVWIADPTRNAAGIAAVARQCSEQGVAVALFPELSLTGYAIDDLLGQQALLDA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +AI L + T D I+VG P + ++ + N V+L G+++ V KI+LPNY EF+E Sbjct: 73 VHAAIGELCTATADLLPVIIVGAPLRHRDRLFNCAVVLHRGSVLGVVPKIHLPNYREFYE 132 Query: 126 KRTFISG----YSNDPIVFRD----------------IRLGILICEDIWKNSNICKHLKK 165 +R F SG + P+ +D + +G+ ICED++ L Sbjct: 133 RRQFASGDGIVGQSIPVAGQDAPFGTDLLFPAADLPGLTIGVEICEDMFVPVPPSSGLAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + R + Q +Y G+ +L +DG + F Sbjct: 193 AGATVLLNLSGSPITIGRADTRAALCRAQSMRCLSAYLYAAAGRGESTTDLSWDGQTSIF 252 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD-----QQLSQWNYMSDDSAS-------TMYIPLQE 271 + LA + F+E +T D Q+ ++ D+ + T+ LQ Sbjct: 253 ENGVLLA-KGPRFAEDPVVTVADVDLDRLRQERARQGTFDDNRRAVGGPVPRTVEFTLQP 311 Query: 272 EEAD---------------------------YNACVLSLRDYVQKNNFHKVIIGLSGGID 304 +AD YN V L ++ V+IG+SGG+D Sbjct: 312 PDADLGLRRVVERFPFVPADPERLAQDCYEAYNIQVDGLVQRLRAIGTRTVVIGVSGGLD 371 Query: 305 SA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S + AA A+D LG + N++ +P T + +A A +ALG + L I Sbjct: 372 STHALIVAARAMDLLGYPRTNIRGFTMPGFATGTSTKANAWALMRALGITANELDIRPAA 431 Query: 360 NHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + EE I EN+Q+ +R + L L+NH ++L T + SE+++G+ T Sbjct: 432 RQMLADLDHPFGRGEEVYDITFENVQAGLRTDYLFRLANHHHGIVLGTGDLSELALGWST 491 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP---SILEKSPSAEL 473 GD +N + KT + L W +GL ++ + SIL S EL Sbjct: 492 YGVGDQMSHYNVNAGVPKTLIQHLIRW------VAGLADFSDDVDEILLSILGTEISPEL 545 Query: 474 RP------HQTDQESLPPYPILD 490 P Q+ ++S+ PY + D Sbjct: 546 IPVKDGEVPQSTEKSIGPYELQD 568 >gi|182412867|ref|YP_001817933.1| NAD+ synthetase [Opitutus terrae PB90-1] gi|177840081|gb|ACB74333.1| NAD+ synthetase [Opitutus terrae PB90-1] Length = 658 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 158/587 (26%), Positives = 252/587 (42%), Gaps = 93/587 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +K+A LN D N A A +A G+ ++ EL ISGY ED F Sbjct: 1 MKPIKVAAGILNQTPLDWDSNRANIITAIRQARETGVGVLCLPELCISGYGCED-AFHAP 59 Query: 62 FI-QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ Q + ++ + +T G + VG P Q V N +L G I K L Sbjct: 60 FVHQTAWTELNIIAGETT--GMAVAVGLPVMHQNSVFNCACLLVDGVIAGFVAKKFLAGD 117 Query: 121 SEFHEKRTFI---SGYSND--------PI--VFRDI---RLGILICEDIWKNSNICKHLK 164 +E R F SG ++ P VF D+ R+G ICED W + L Sbjct: 118 GIHYEPRWFKPWPSGVQHELRVDGRSYPFGDVFFDLDGLRIGFEICEDAWVANRPGASLA 177 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCF 223 +G + +F+ +AS + KL R V +Y N VG + I+DG + Sbjct: 178 SKGVDVIFNPSASHFAFGKLDVRKRFVLEGSRAFGATYVYSNHVGNEAGRAIYDGGALIA 237 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLS----------QWNYMSDDSA---------ST 264 G + +A + + +T D Q + Q S D+ +T Sbjct: 238 SGGKLVAAGPRFSFQGVTVTSAVVDIQQTRLSQARTTSHQPGLTSSDAGCVRLKFAVPAT 297 Query: 265 MYIPLQ------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + P + + E A L+L DY++K+ H ++ LSGG+DSA +A Sbjct: 298 AFEPAKIVMAPWENSAELKAEEFARAEALALFDYMRKSRLHGFVVSLSGGVDSAAVTCLA 357 Query: 313 -------VDALG----------------KENVQTIMLP-----YKYT--SPQSLEDAA-A 341 + LG +V +++ Y+ T S + DAA A Sbjct: 358 GLSVRMGIAELGLNGFLKKLGYAHALREHRDVGSVIRALLTCVYQGTENSSATTRDAARA 417 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMS----QFLQEEPSGIVAENIQSRIRGNILMALSNH 397 A+A+G ++ + +LV + S++S + L I +NIQ+R+R + L+N Sbjct: 418 VAQAVGAEFLEFEVGELVERYTSIVSGAIGRPLTWATDDIALQNIQARVRAPGVWFLANL 477 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 A+LL+TSN+SE +VGY T+ GD GG +P+ + K + Q W HG G+G L Sbjct: 478 RNALLLSTSNRSEAAVGYATMDGDTCGGLSPIAGIDKAYLRQWLVWMEQHG-PDGIGALP 536 Query: 458 EVIPPSILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIVENEE 501 + + ++P+AELRP QTD+ L PY +LD + + +++ Sbjct: 537 AL--RLVNAQAPTAELRPAEQKQTDEGDLMPYTVLDACERAFIRDKK 581 >gi|283780963|ref|YP_003371718.1| NAD+ synthetase [Pirellula staleyi DSM 6068] gi|283439416|gb|ADB17858.1| NAD+ synthetase [Pirellula staleyi DSM 6068] Length = 664 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 155/590 (26%), Positives = 246/590 (41%), Gaps = 97/590 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +++ A LN D GN + A E A Q + ++ EL I+GY ED F Sbjct: 1 MKLIRVGAAVLNQTPLDWDGNRDRILEAIELARSQSVSILCLPELCITGYGCED-AFHAP 59 Query: 62 FIQACSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Q S A+ L+ H G + +G P + N+ ++ G ++ + K NL Sbjct: 60 GTQ--SMAVRVLEEILPHTQGMIVSLGLPVMYHGSLYNAACLVVDGEVVGLACKQNLAGE 117 Query: 121 SEFHEKRTFISGYSN--------------DPIVFR--DIRLGILICEDIWKNSNICKHLK 164 +E R F S IVF D+RLG ICED W L Sbjct: 118 GIHYEPRWFKPWPSMRQSTIDFAGRTLPIGDIVFECGDVRLGFEICEDAWVAERPGSLLA 177 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-ELIFDGAS--- 220 G + + + +AS + K + R V + +Y N +G + I+DG + Sbjct: 178 THGVDLILNPSASHFAFGKHEIRKRFVIEGSRAFQVGYVYANLLGNESGRAIYDGDAMIA 237 Query: 221 -----------FCFDGQQQLA-------FQMKHFSEQNF----MTEWHYDQQLSQWNYMS 258 F + Q +A +M +F TE + S++ + Sbjct: 238 ASGNLLALGERFSYREVQVIAADVDINNIRMNRARSGSFRPVIATE-AWKPVKSKFAFPD 296 Query: 259 DDSASTMY-------IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA----L 307 D T P +EE A L+L DY +K+ ++ LSGG DS+ L Sbjct: 297 RDPVRTEVKASPWESSPTIKEEEFTRAVSLALLDYCRKSRSRGFVVSLSGGADSSGVSVL 356 Query: 308 CAAI---AVDALGKENVQTIMLPY--------------------KYTSPQSLED-----A 339 A++ A+ +G E + + M PY Y S ++ D A Sbjct: 357 IASMVRFALAEIGAEKLASKM-PYLPKLANAKTSHDFVRQLLSCVYQSTRNSGDVTRNAA 415 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE----PSGIVAENIQSRIRGNILMALS 395 A A+G Y + LV H+ +++ + E + +NIQ+R R + L+ Sbjct: 416 RTLAVAIGADYLEFDVDPLVQHYIQMVAGAIGRELDWKQDDLALQNIQARTRSPGVWMLA 475 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N A+LL TSN+SE +VGY T+ GD SGG +P+ + K + + W G GL P Sbjct: 476 NLRGALLLATSNRSEAAVGYATMDGDTSGGLSPIAGIDKAFLRKWLRWMQKEG-PQGLAP 534 Query: 456 LTEVIPPSILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIVENEES 502 +TE+ + ++ P+AELRP QTD++ L PY +LD I + + ++ S Sbjct: 535 ITEL--SVVTDQPPTAELRPPSAKQTDEDDLMPYEVLDAIERAAIRDKLS 582 >gi|327399703|ref|YP_004340572.1| NH(3)-dependent NAD(+) synthetase [Hippea maritima DSM 10411] gi|327182332|gb|AEA34513.1| NH(3)-dependent NAD(+) synthetase [Hippea maritima DSM 10411] Length = 278 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 19/201 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR + K K ++GLSGGIDSA+ A +A +ALGKENV I++PYK +S +S+EDA Sbjct: 24 LRQEITKTGIIKAVLGLSGGIDSAVVAYLAKEALGKENVYAILMPYKLSSKESVEDALKV 83 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 K G Y + I + + + QF ++ + NI +R+R L S+ KA++ Sbjct: 84 VKDTGINYKIFEITKPADAY---IDQF--DDIDKLRKGNIFARMRMITLFDHSSLYKALV 138 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+E+ +GYGT YGDM+ NP+ DLYK Q++QLA + +P Sbjct: 139 VGTSNKTELLLGYGTWYGDMASSLNPIGDLYKNQIYQLARYFK--------------VPE 184 Query: 463 SILEKSPSAELRPHQTDQESL 483 SI+EK PSA+L Q+D++ L Sbjct: 185 SIIEKKPSADLWVGQSDEDEL 205 >gi|331086100|ref|ZP_08335183.1| hypothetical protein HMPREF0987_01486 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407023|gb|EGG86528.1| hypothetical protein HMPREF0987_01486 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 637 Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 130/549 (23%), Positives = 228/549 (41%), Gaps = 70/549 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A N V D+ N+ + R +E QG +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAAVTPNMRVADVEYNVNEICRMIDETTEQGAKVIAFPELCITGYTCGDLFSQEILLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + T + A I VG P + + N+ L+ G ++ + K LPNY EF+ Sbjct: 66 EAKQGLYRIAEYTKEKDALIFVGVPYEVAGKLYNTAAALNHGKVLGLVTKTFLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R F +G + ++ + + + ICED+W Sbjct: 126 EMRQFQAGPQSVQMIETEGHRIPFGPRLLFQAETMKHLVVSAEICEDVWSAVPPSIEAAV 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K + R ++ GQ + + +Y N G+ +L+F G + Sbjct: 186 EGATLIVNCSASNEIAGKEEYRRSLIAGQSARLLAGYVYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ----WNYMSDDSASTMYIPLQEEEADY--- 276 + + L + K F+ +E + L + + S YIP + E+ + Sbjct: 246 ENGEILK-ESKRFTSGAIYSEIDVEMLLGERRKNTTFQRKGEYSIPYIPFEIEKEETMLT 304 Query: 277 -----------------NAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC---A 309 C + L+ + N + ++G+SGG+DS L Sbjct: 305 RKIPMSPFVPENKVTRSRQCEEILMIQAVGLKKRMLHTNCQRAVVGISGGLDSTLALLVT 364 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A + D LG + + ++ +P T+ ++ ++A K LG +PI + V F + Sbjct: 365 AKSFDLLGIDRSQILSVTMPCFGTTDRTYQNACRLTKKLGATLREIPIQNAVRVHFEDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 Q EE + EN Q+R R ILM L+N + M++ T + SE+++G+ T GD + Sbjct: 425 Q--SEEEHDVTYENAQARERTQILMDLANKTNGMVIGTGDMSELALGWATYSGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQE 481 + KT V+ L + L L IL+ S EL P Q +E Sbjct: 483 VNASVPKTLVYHLVRYYAEECEDPELKGLLF----DILDTPVSPELLPPKDGEIVQKTEE 538 Query: 482 SLPPYPILD 490 ++ PY + D Sbjct: 539 TVGPYELHD 547 >gi|313672102|ref|YP_004050213.1| nh(3)-dependent nad(+) synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312938858|gb|ADR18050.1| NH(3)-dependent NAD(+) synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 270 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/269 (32%), Positives = 149/269 (55%), Gaps = 22/269 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ +K F +++GLSGGIDSAL A +AV A+G + + LPYK +S +SL+DA Sbjct: 16 IKEETEKTGFSNLVVGLSGGIDSALSAVLAVKAVGSDKLFAFALPYKTSSRESLDDAKLV 75 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A G V+ I V+ F ++ + N+ +R+R L +S+ +A++ Sbjct: 76 ADEFGINLQVIEITPYVDPFLETLNL-----DDKLRMGNVMARMRMVTLFDMSSKYRALV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGT YGD++ NP+ DLYKTQV++L+ + LG IP Sbjct: 131 LGTSNKTELLLGYGTWYGDLASAINPIGDLYKTQVWELSKY---------LG-----IPE 176 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 ++ K P+A+L QTD++ L Y +D ++ +++ S D ++++ + V Sbjct: 177 KLINKKPTADLWVGQTDEDELGFSYKEVDKLLYHMIDERLSKSELMDLGFSEQFIMNVAE 236 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + +++K RQ P+ KI+ ++ RD Y Sbjct: 237 KVRRNQFK-RQLPIIAKISNRTIDRDFRY 264 >gi|139437275|ref|ZP_01771435.1| Hypothetical protein COLAER_00414 [Collinsella aerofaciens ATCC 25986] gi|133776922|gb|EBA40742.1| Hypothetical protein COLAER_00414 [Collinsella aerofaciens ATCC 25986] Length = 668 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 132/551 (23%), Positives = 234/551 (42%), Gaps = 86/551 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A V D+ GN A A EA +G+ ++ EL ++GY DL ++ + Sbjct: 21 LRVAAASPRIRVADVEGNAEVALAAVREATERGVRALVLPELNLTGYTAADLFHNRTLLH 80 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A+ + +T D +G P E + N + AG ++ + K LPNY EF+ Sbjct: 81 ACEAALVHILDETRDLPIVFTIGLPVAVAENIYNCAAVCCAGELLGLTAKKYLPNYGEFY 140 Query: 125 EKRTFISGYSNDPI----------------VFR-------DIRLGILICEDIWKNSNICK 161 E+R F + DP+ V+R D+ LG+ +CED+W + Sbjct: 141 ERRWFAPSPA-DPVWVEFAGQGPVPLGSGLVYRCCDEGAEDMVLGVEVCEDLWVPAPPST 199 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 + GA + + +AS K R +++ Q + ++ Y + G+ +++F G Sbjct: 200 EMALAGATVILNPSASDEIIGKADYRRSLISNQSARLYCAYAYADASEGESTTDMVFAGE 259 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ------WNYMSDDSASTMYIP----- 268 + ++ +LA K + + + D+ +++ W +DD+ + Sbjct: 260 NLIYENGSKLA-ATKLLTCDMAIADVDLDRLVAERRRSTTWA-RTDDAPEATTVEFSFEG 317 Query: 269 -LQEEEADYNAC------------------------------VLSLRDYVQKNNFHKVII 297 L EE +AC L+ + +I Sbjct: 318 VLAEEPVLRDACDIDRVFPRAPFVPADHGDLAERCETILDLQTAGLKTRLAHTGTKAAVI 377 Query: 298 GLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 GLSGG+DS L + V DALG + + + +P T+ ++ +A + A+ LG + Sbjct: 378 GLSGGLDSTLALLVTVRAFDALGLPRTGITAVSMPGFGTTHRTKSNAESLARDLGVSFRE 437 Query: 353 LPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + IH V F + ++ +P+ + EN Q+R R ILM L+N + ++ T + SE Sbjct: 438 VSIHAAVEQHF----KDIEHDPAVQDVTYENSQARERTQILMDLANQAGGFVIGTGDLSE 493 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++G+ T GD + + KT V L R + + G + EV+ IL+ S Sbjct: 494 LALGWATYNGDHMSMYAVNASVPKTLVRHLV--RYAADVFGGR--IAEVL-LDILDTPVS 548 Query: 471 AELRPHQTDQE 481 EL P D E Sbjct: 549 PELLPPTGDGE 559 >gi|269118886|ref|YP_003307063.1| NAD+ synthetase [Sebaldella termitidis ATCC 33386] gi|268612764|gb|ACZ07132.1| NAD+ synthetase [Sebaldella termitidis ATCC 33386] Length = 261 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 143/257 (55%), Gaps = 25/257 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R V+ + F KVI+GLSGGIDS+L A +A +A GK+NV +++PY+ +SP+S EDA Sbjct: 19 MRREVRNSGFEKVILGLSGGIDSSLVAFLAKEAFGKKNVHGVIMPYRTSSPKSEEDALKV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+A ++ + I ++V+ +FS + S + N +R R IL LS ++++ Sbjct: 79 AEAAKISWEKVEITNMVDSYFSFFP-----DASPLRKGNRMARERMCILYDLSARDRSLV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + T NK+E+ +GY T YGD + P+ DLYKTQV+ L+ + LG +P Sbjct: 134 MGTGNKTEMYLGYSTQYGDAACALLPIADLYKTQVWSLSEY---------LG-----VPK 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINND---QEYNDETVRYV 518 ++EK PSA+L QTD+ L Y DDI+ +++ ++ N+ + E V + Sbjct: 180 EVIEKKPSADLWEGQTDEGELGFSYHDADDILFELIDRKKD--RNEVITLGFKSEVVDSI 237 Query: 519 EHLLYGSEYKRRQAPVG 535 + SE+KRR + Sbjct: 238 LEKIKNSEFKRRMPKIA 254 >gi|167766739|ref|ZP_02438792.1| hypothetical protein CLOSS21_01245 [Clostridium sp. SS2/1] gi|167711493|gb|EDS22072.1| hypothetical protein CLOSS21_01245 [Clostridium sp. SS2/1] Length = 632 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 142/611 (23%), Positives = 267/611 (43%), Gaps = 84/611 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D A N + + +E + G +++F+EL ISGY DL ++ + Sbjct: 6 IKVAAATPKIKVADPAYNTEEILKIIDETEKNGASILVFSELTISGYTCGDLFLQQPLLT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + + T + +VVG P ++ + N V++ G+I+ + K +LPNYSEF+ Sbjct: 66 ECKNQLLRIVKATENKSMLVVVGCPIVIKQKLYNCAVVISDGSILGIVPKTHLPNYSEFY 125 Query: 125 EKRTFIS--------------GYSNDPI--VFR-----DIRLGILICEDIWKNSNICKHL 163 E R F S GY N + +F+ ++ + ICED+W + Sbjct: 126 ELRHFTSGEGLEEDLWFGEEFGYVNVAVNQLFKCKEIPELVVACEICEDLWVPLPPSTYH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + + +AS K R +V+ Q + + IY + G+ ++++ G Sbjct: 186 AMAGATVICNPSASVETTTKESYRRSLVSNQSARLLAAYIYADAGEGESTQDVVYSGHHL 245 Query: 222 -CFDG--------------------QQQLAFQMKHFSEQNFMTEWHYDQQLS---QWNYM 257 C +G Q+ A + K S TE +++Q+ S + N + Sbjct: 246 ICENGSVLAEAKRFTNEIIYADIDVQKLAAERRKMTSFPGGQTEDYFEQEFSLEVKENKI 305 Query: 258 SDDSASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + ++P ++E D C + L+ ++ N ++G+SGG+DS L Sbjct: 306 TRTFPKAPFVPDNQDERD-KRCDEILSLQSMGLKKRLEHTNCKHAVVGISGGLDSTLAVL 364 Query: 311 IAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + A + +EN+ + +P T+ ++ ++A + K LG + I V F+ Sbjct: 365 VTARAFDLLDIPRENLICVTMPCFGTTDRTYQNAVSLIKELGATLKEVRIEKAVRQHFAD 424 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + E + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 425 IGH--DENNHDVTYENSQARERTQILMDMANQYNGMVIGTGDMSELALGWATYNGDHMSM 482 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + + T+ L+EV+ +L+ S EL P Q Sbjct: 483 YAVNCSVPKTLVRYLVLY---YAETTDNKKLSEVL-MDVLDTPVSPELLPPVDGVISQKT 538 Query: 480 QESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV-RYVEHL---LYGSEY 527 ++ + PY + D + ++ + + D Y+DET+ ++++ + ++ Sbjct: 539 EDLVGPYELHDFFLYYMLRFGFPKSKLYRMAKLTFDGVYDDETIKKWLDKFYWRFFSQQF 598 Query: 528 KRRQAPVGTKI 538 KR P G K+ Sbjct: 599 KRSCLPDGPKV 609 >gi|11498605|ref|NP_069833.1| NAD synthetase [Archaeoglobus fulgidus DSM 4304] gi|6093466|sp|O29262|NADE_ARCFU RecName: Full=Probable NH(3)-dependent NAD(+) synthetase gi|2649596|gb|AAB90242.1| NH(3)-dependent NAD+ synthetase (nadE) [Archaeoglobus fulgidus DSM 4304] Length = 247 Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 94/254 (37%), Positives = 134/254 (52%), Gaps = 29/254 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP-QSLEDAAA 341 +R V + V++GLSGG+DSA A + V ALG E V +++P +P Q +EDA Sbjct: 14 IRGVVSSSGSTGVVLGLSGGVDSATVAYLCVRALGSERVFALIMPETGVTPEQDVEDAIN 73 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A++LG +Y ++ I+D+V F E S I N++ RIR + +N + Sbjct: 74 VAESLGMEYKLIEINDIVRVFKEKAG-----EGSKIAEANLKPRIRMVLNYYHANSMNRL 128 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 + T NKSE+ VGY T YGD F P+ DLYKT+VFQLA++ LG +P Sbjct: 129 VAGTGNKSELMVGYFTKYGDGGVDFLPIGDLYKTEVFQLAAY---------LG-----VP 174 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEH 520 I+EK PSA L P QTD+E + Y LD+I+K I + +DE R V Sbjct: 175 RRIIEKKPSARLWPGQTDEEEMGISYAELDEILK--------LIEKGERRDDEKFRRVVQ 226 Query: 521 LLYGSEYKRRQAPV 534 ++ S +KR PV Sbjct: 227 MVERSRHKREMPPV 240 >gi|225019726|ref|ZP_03708918.1| hypothetical protein CLOSTMETH_03679 [Clostridium methylpentosum DSM 5476] gi|224947571|gb|EEG28780.1| hypothetical protein CLOSTMETH_03679 [Clostridium methylpentosum DSM 5476] Length = 689 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 138/546 (25%), Positives = 230/546 (42%), Gaps = 69/546 (12%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I +A P+ VGD N + A+ +G L+LF EL ++ Y DL+ + ++ Sbjct: 60 IRVAAATPLNRVGDTRYNAEQTVSLIRRAHARGASLVLFPELSVTAYSCGDLLLSSTLLR 119 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + +T + +VG P D + N +L G+I + K NLPNY EF+ Sbjct: 120 GTEQAVQHILDETKELDITAIVGLPVSDGVRLYNCAAVLSKGSICGIVPKQNLPNYGEFY 179 Query: 125 EKRTF--ISGYSNDPI---------------VFRDIRLGILICEDIWKNSNICKHLKKQG 167 E R F S D + D ++GI ICED+W NS + L + G Sbjct: 180 EARWFSPASSLQTDTVTLCGQQTSICCELLFTLGDAKIGIEICEDLWVNSPPSERLAEAG 239 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQ--ISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 A + +L+AS K R +V + SH + + ++ G S + Sbjct: 240 ANLICNLSASNAVIGKRSYRSMLVRQRSFCSHCAYLLASAGITESTTDTLYSGHSLIAEN 299 Query: 226 QQQLAFQMK-HFSEQNFMTE--------------------WHYDQQLS---QWNYMSDDS 261 LA M+ +F EQ + W + +L Q + Sbjct: 300 GSILAEAMQDNFEEQLLFADIDLERLSSDRRKMTTFPTGGWAQEIELPHGVQAFSLERRL 359 Query: 262 ASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA 315 + T ++P D YN LSL ++ +IG+SGG+DS L + V A Sbjct: 360 SKTPFLPSSSARKDERMEEIYNIQSLSLAKRLRHTGLKHPVIGISGGLDSTLALLVTVRA 419 Query: 316 LGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLMSQF 369 + K NV I +P TS ++L ++ ALG + I + + HF + Sbjct: 420 MDKLGLDRSNVIGITMPGFGTSGRTLTNSQRLMAALGITSRQIDITEACLKHF-----ED 474 Query: 370 LQEEP--SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + +P + EN+Q+R R IL+ ++N + +++ T + SE+++G+ T GD + Sbjct: 475 IGHDPDVQDVTYENVQARERTQILLDIANKNNGLVVGTGDLSELALGWATYAGDHISMYG 534 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYP 487 + KT V + +W G T G G + E++ IL+ S EL P + + + Sbjct: 535 VNAGVPKTLVRHVVAWT---GRTYG-GEIEEIL-KDILDTPVSPELLPTKDGEIAQKTEE 589 Query: 488 ILDDII 493 I+ D I Sbjct: 590 IIGDYI 595 >gi|167753181|ref|ZP_02425308.1| hypothetical protein ALIPUT_01452 [Alistipes putredinis DSM 17216] gi|167659495|gb|EDS03625.1| hypothetical protein ALIPUT_01452 [Alistipes putredinis DSM 17216] Length = 644 Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 125/497 (25%), Positives = 204/497 (41%), Gaps = 60/497 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+A A + + D N + +G +ILF EL I+ Y DL+ + + + Sbjct: 7 LKVAAAVPHVRIADCDYNAQHITELIRKGADRGASIILFPELCITSYTCGDLIQQPALLH 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + T + +VG P + N V+ G I V K +PNYSEF+ Sbjct: 67 AAEQALGYILAQTRELPIVAIVGMPVTYGNALYNCAVVFAQGRIHGVVPKTYIPNYSEFY 126 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 E R F+SG R ++ G+ ICED+W + H G Sbjct: 127 EARCFMSGEEIGLATIRMCGQDTDFGRNMLFNIGGVKFGVEICEDMWVPAAPSLHQAVDG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A+ LF+L+ASP K +V Q + IY + G+ +L+F G + Sbjct: 187 AQILFNLSASPEVLGKHNYLLTLVKSQSARTQSAYIYCSAGYGESSTDLVFGGNGLIVES 246 Query: 226 QQQLAFQMKHFSEQNFM-----TEWHYDQQLSQWNYMSDDSASTM--------------- 265 + L + +E+ + TE + + + A + Sbjct: 247 GRMLRRTERFSTEEQLIVADIDTEKLLNSRRRTTTFAPHRPAERIIVEIPLPENPANVTL 306 Query: 266 --------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 ++P EE D N + L +Q + KV+IG+SGG+DS L I Sbjct: 307 DREFNSHPFVPQTPEEMDESGREIINIQTMGLAQRLQHTDCKKVVIGVSGGLDSTLALLI 366 Query: 312 AV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 AV D LG ++ + + +P TS ++ ++ A + LG + I F+ + Sbjct: 367 AVRTFDRLGLDRKGIIGVTMPGFGTSNRTYRNSIALMRCLGITSREISIRKACEQHFADI 426 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 +E+ S EN Q+R R ILM ++N M+L T + SE+++G+ T GD + Sbjct: 427 GLNPEEQSSAY--ENAQARERTQILMDIANMEHGMVLGTGDLSELALGWATYNGDQMSMY 484 Query: 427 NPLKDLYKTQVFQLASW 443 L KT + L W Sbjct: 485 GLNASLPKTLIQVLLRW 501 >gi|291560729|emb|CBL39529.1| NAD+ synthetase [butyrate-producing bacterium SSC/2] Length = 632 Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 141/612 (23%), Positives = 268/612 (43%), Gaps = 86/612 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D A N + + +E + G +++F+EL ISGY DL ++ + Sbjct: 6 IKVAAATPKIKVADPAYNTEEILKIIDETEKNGASILVFSELTISGYTCGDLFLQQPLLT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + + T + +VVG P ++ + N V++ G+I+ + K +LPNYSEF+ Sbjct: 66 ECKNQLLRIVKATENKSMLVVVGCPIVIKQKLYNCAVVISDGSILGIVPKTHLPNYSEFY 125 Query: 125 EKRTFIS--------------GYSNDPI--VFR-----DIRLGILICEDIWKNSNICKHL 163 E R F S GY N + +F+ ++ + ICED+W + Sbjct: 126 ELRHFTSGEGLEEDLWFGEEFGYVNVAVNQLFKCKEIPELVVACEICEDLWVPLPPSTYH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + + +AS K R +V+ Q + + IY + G+ ++++ G Sbjct: 186 AMAGATVICNPSASVETTTKESYRRSLVSNQSARLLAAYIYADAGEGESTQDVVYSGHHL 245 Query: 222 CFDGQQQLAFQMKHFS---------------EQNFMTEW-------HYDQQLS---QWNY 256 + LA + K F+ E+ MT + +++Q+ S + N Sbjct: 246 ICENGSVLA-EAKRFTNEIIYADIDVQKLAAERRKMTSFPGGQTDDYFEQEFSLEVKENK 304 Query: 257 MSDDSASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++ ++P ++E D C + L+ ++ N ++G+SGG+DS L Sbjct: 305 ITRTFPKAPFVPDNQDERD-KRCDEILSLQSMGLKKRLEHTNCKHAVVGISGGLDSTLAV 363 Query: 310 AIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + A + +EN+ + +P T+ ++ ++A + K LG + I V F+ Sbjct: 364 LVTARAFDLLDIPRENLICVTMPCFGTTDRTYQNAVSLIKELGATLKEVRIEKAVRQHFA 423 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + E + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 424 DIGH--DENNHDVTYENSQARERTQILMDMANQYNGMVIGTGDMSELALGWATYNGDHMS 481 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQT 478 + + KT V L + + T+ L+EV+ +L+ S EL P Q Sbjct: 482 MYAVNCSVPKTLVRYLVLY---YAETTENKKLSEVL-MDVLDTPVSPELLPPVDGVISQK 537 Query: 479 DQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV-RYVEHL---LYGSE 526 ++ + PY + D + ++ + + D Y+DET+ ++++ + + Sbjct: 538 TEDLVGPYELHDFFLYYMLRFGFPKSKLYRMAKLTFDGVYDDETIKKWLDKFYWRFFSQQ 597 Query: 527 YKRRQAPVGTKI 538 +KR P G K+ Sbjct: 598 FKRSCLPDGPKV 609 >gi|317404986|gb|EFV85346.1| glutamine-dependent NAD(+) synthetase [Achromobacter xylosoxidans C54] Length = 691 Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 138/569 (24%), Positives = 236/569 (41%), Gaps = 92/569 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N A+ ++A + G L+ F EL +S Y +DL +K+ + A Sbjct: 18 RVAVGVPECKVADPAFNAAQTIALAQQAAQGGAVLVAFPELGLSAYTCDDLFHQKALLDA 77 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +A+D + T + ++VG P + + N V++ G I+ V K LPNYSEF+E Sbjct: 78 CEAALDQVARATAELDIAVIVGAPLRVAHQLYNCAVVIAGGRILGVVPKSFLPNYSEFYE 137 Query: 126 KRTFISGYSNDPIVFRDIRL-----------------------GILICEDIWKNSNICKH 162 R F + D V +IRL + ICED+W Sbjct: 138 ARQFSAA---DCAVATEIRLLDQTVPFGPELLFQMEKLPLFQFHVEICEDVWVPIPPSSF 194 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA L +L+AS K RH++V Q + +Y + G+ +L +DG + Sbjct: 195 AALAGATVLVNLSASNIVVGKSAYRHQLVAQQSARCLAAYMYTSAGRGESSTDLAWDGQA 254 Query: 221 FCFDGQQQLAFQMKHFSEQNFM-----TEWHYDQQLSQWNY------------------- 256 ++ + L + +E + + E +++ Q + Sbjct: 255 LIYENGELLGESERFLNESHLLFADVDLERLSRERMHQTTFGQSARRHRDEVRKFRQVPV 314 Query: 257 ------------MSDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIG 298 + A Y+P D YN V +L + + KV+IG Sbjct: 315 PVAAPLEDAELPLERRVARFPYVPADPRRRDERCKEVYNIQVQALAQRLSASGMSKVVIG 374 Query: 299 LSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KY 350 +SGG+DS L A A+D LG + N+ + +P TS ++L+ A +GC + Sbjct: 375 ISGGLDSTHALLVCAQAMDTLGLPRANILAVTMPGFATSTRTLQQARQLMAVVGCTASEV 434 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 D+ P + L + +P I EN+Q+ R N L ++N + A+++ T + S Sbjct: 435 DIRP--SCLQMLKDLGHPYADGQPVYDITFENVQAGERTNHLFRIANFNNAIVIGTGDLS 492 Query: 410 EISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E+++G+ T GD ++ + KT + L W G LG + +L Sbjct: 493 ELALGWCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESG---RLGEAGAAVLLDVLGTD 549 Query: 469 PSAEL-------RPHQTDQESLPPYPILD 490 S EL +P Q ++++ PY + D Sbjct: 550 VSPELVPGGDDGKPTQKSEDTIGPYELQD 578 >gi|317499017|ref|ZP_07957298.1| NAD+ synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893667|gb|EFV15868.1| NAD+ synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 632 Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 141/612 (23%), Positives = 268/612 (43%), Gaps = 86/612 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D A N + + +E + G +++F+EL ISGY DL ++ + Sbjct: 6 IKVAAATPKIKVADPAYNTEEILKIIDETEKNGASILVFSELTISGYTCGDLFLQQPLLT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + + T + +VVG P ++ + N V++ G+I+ + K +LPNYSEF+ Sbjct: 66 ECKNQLLRIVKATENKSMLVVVGCPIVIKQKLYNCAVVISDGSILGIVPKTHLPNYSEFY 125 Query: 125 EKRTFIS--------------GYSNDPI--VFR-----DIRLGILICEDIWKNSNICKHL 163 E R F S GY N + +F+ ++ + ICED+W + Sbjct: 126 ELRHFTSGEGLEEDLWFGEEFGYVNVAVNQLFKCKEIPELVVACEICEDLWVPLPPSTYH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + + +AS K R +V+ Q + + IY + G+ ++++ G Sbjct: 186 AMAGATVICNPSASVETTTKESYRRSLVSNQSARLLAAYIYADAGEGESTQDVVYSGHHL 245 Query: 222 CFDGQQQLAFQMKHFS---------------EQNFMTEW-------HYDQQLS---QWNY 256 + LA + K F+ E+ MT + +++Q+ S + N Sbjct: 246 ICENGSVLA-EAKRFTNEIIYADIDVQKLAAERRKMTSFPGGQTDDYFEQEFSLEVKENK 304 Query: 257 MSDDSASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++ ++P ++E D C + L+ ++ N ++G+SGG+DS L Sbjct: 305 ITRTFPKAPFVPDNQDERD-KRCDEILSLQSMGLKKRLEHTNCKHAVVGISGGLDSTLAV 363 Query: 310 AIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + A + +EN+ + +P T+ ++ ++A + K LG + I V F+ Sbjct: 364 LVTARAFDLLDIPRENLICVTMPCFGTTDRTYQNAVSLIKELGATLKEVRIEKAVRQHFA 423 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + E + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 424 DIGH--DENNHDVTYENSQARERTQILMDMANQYNGMVIGTGDMSELALGWATYNGDHMS 481 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQT 478 + + KT V L + + T+ L+EV+ +L+ S EL P Q Sbjct: 482 MYAVNCSVPKTLVRYLVLY---YAETTENKKLSEVL-MDVLDTPVSPELLPPVDGVISQK 537 Query: 479 DQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV-RYVEHL---LYGSE 526 ++ + PY + D + ++ + + D Y+DET+ ++++ + + Sbjct: 538 TEDLVGPYELHDFFLYYMLRFGFPKAKLYRMAKLTFDGVYDDETIKKWLDKFYWRFFSQQ 597 Query: 527 YKRRQAPVGTKI 538 +KR P G K+ Sbjct: 598 FKRSCLPDGPKV 609 >gi|16127849|ref|NP_422413.1| NAD synthetase [Caulobacter crescentus CB15] gi|221236670|ref|YP_002519107.1| NAD synthetase [Caulobacter crescentus NA1000] gi|13425369|gb|AAK25581.1| NAD(+) synthetase, putative [Caulobacter crescentus CB15] gi|220965843|gb|ACL97199.1| glutamine-dependent NAD(+) synthetase [Caulobacter crescentus NA1000] Length = 678 Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 147/560 (26%), Positives = 238/560 (42%), Gaps = 79/560 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + D A N EA+ +G+ +++F EL ++GY +DL+ +++ + Sbjct: 15 VRVATAVPKVKLADPAANAQNVVALAREAHAEGVAVVVFPELGLTGYTIDDLLQQEALLD 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +AI TL + IVVG P +D + N+ +++ G ++ V K LPNY EF+ Sbjct: 75 AVEAAIATLTEASAGLAPMIVVGGPLRDAGRLYNTAIVIQGGKVLGVVPKSFLPNYREFY 134 Query: 125 EKRTFISG----------------YSNDPIVFRD-----IRLGILICEDIWKNSNICKHL 163 E+R F G + D I+FR +G+ ICED+W + Sbjct: 135 ERRWFTPGAGLTGKTLTLAGQTVPFGTD-ILFRGEGVAPFTVGVEICEDVWTPTPPSTAQ 193 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GAE L +L+AS K + R + Q S + +Y G+ +L +DG Sbjct: 194 ALAGAEILLNLSASNITIGKSETRRLLCASQSSRMIAAYVYSAAGAGESSTDLAWDGHVD 253 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYD-QQLSQ--------WNYMSDDSASTMY--IPLQ 270 + LA + FS T D Q+L Q + M+ AST + +P Sbjct: 254 IHEMGALLA-ETPRFSTGPAWTFADVDVQRLRQERMRVGSFGDAMALSPASTPFRIVPFA 312 Query: 271 --EEEAD---------------------------YNACVLSLRDYVQKNNFHKVIIGLSG 301 E D YN V L ++ + K++IG+SG Sbjct: 313 FDAPEGDLALARPIERFPFTPSDPARLRENCYEAYNIQVQGLARRLEASGLKKLVIGISG 372 Query: 302 GIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L AA A+D LG + N+ LP TS ++ +A A KA+ L I Sbjct: 373 GLDSTQALLVAAKAMDQLGLPRSNILAYTLPGFATSDRTKSNAWALMKAMAVTAAELDIR 432 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E + EN+Q+ +R + L L+NH+ A+++ T + SE+++G Sbjct: 433 PAATQMLKDLDHPFGRGEAVYDVTFENVQAGLRTDYLFRLANHNAALVVGTGDLSELALG 492 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +NP KT + L + G +G T + IL S EL Sbjct: 493 WCTYGVGDHMSHYNPNCGAPKTLIQHLIRFVAHSG---DVGAETTALLDDILATEISPEL 549 Query: 474 RPHQTDQES---LPPYPILD 490 P + Q + + PY + D Sbjct: 550 VPGEAVQATESFVGPYALQD 569 >gi|292669657|ref|ZP_06603083.1| NAD(+) synthase [Selenomonas noxia ATCC 43541] gi|292648454|gb|EFF66426.1| NAD(+) synthase [Selenomonas noxia ATCC 43541] Length = 555 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 146/591 (24%), Positives = 255/591 (43%), Gaps = 109/591 (18%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ + V G N A R EA ++ +F L +SG + +F++ Sbjct: 1 MKIALISMEVVPGRPDQNAAAMREKIAEAKAAHAEIAVFPALSLSGLFLGGVWKHSAFLR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGVLNSV--VILDAGNIIAVRDKINLPNYS 121 C+S + + + D I V F +EG V +++A N + +R+ P + Sbjct: 61 DCASYAEEIAAAAQD----ITVVFGNAAKEEGACAGVSRTLMEARNGV-LREVARRPLHG 115 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 +G S DP+ + F+ + +A+P+ H Sbjct: 116 ---------AGTSFDPLFY-----------------------TAADRNFILAADATPFPH 143 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQQQLAFQMKHFS 237 R T + H+PI Y+N +G QD+ F G++ F+ + ++ Sbjct: 144 C-FGARTLAETAR--EKHMPIFYINTLGLQDKGKTVYAFSGSAQVFNAAGERVLISPAYA 200 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E + + QLS ++A + +++ ++ + + +V+I Sbjct: 201 EGLTIID---STQLSPAAARPAEAAIAPI---------HRTIRYAVQKFLARIHMERVVI 248 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 G+SGGIDSA+ AA+ VDA+G + V + +P K+ S + + AA A++LGC++ ++PI + Sbjct: 249 GISGGIDSAVAAALYVDAIGADKVLLVNMPSKFNSATTKDLAAQLAESLGCRHMIVPIEE 308 Query: 358 LVNHFFSLMSQF-LQEEP---------SGIVAENIQSRIR-GNILMALSNHSKAMLLTTS 406 V + ++ + +P S V EN+Q+R R G +L A++ A + Sbjct: 309 SVAYTAEQLTGIPIMGKPAAEGEHLTISSFVRENMQARDRSGRVLSAVAAAWGAGFTCNA 368 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS--HGITSGLGPLTEVIPPSI 464 NK+E +VGY TLYGD +G + L DL+K Q++ LA + N +G EVIP I Sbjct: 369 NKAESTVGYATLYGDQAGFLSALADLWKYQIYDLARYLNETVYG--------REVIPQGI 420 Query: 465 LEKSPSAELRPHQ-TDQESLPP--YPILDDIIKRIVENEE-------------------- 501 ++ PSAEL Q D+ P YP D + + VE Sbjct: 421 IDIVPSAELSDAQNVDEGKGDPIRYPYHDYLFRAFVEENRIPEDILAHYADGDLEDDIGC 480 Query: 502 ------SFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRD 546 SF + +++ D+ R+ + KR QAP +T +++G D Sbjct: 481 GKGVIASFFSTTKDFIDDLERWWNLYTGMAVAKRIQAPPLISVTGRAYGAD 531 >gi|296109747|ref|YP_003616696.1| NAD+ synthetase [Methanocaldococcus infernus ME] gi|295434561|gb|ADG13732.1| NAD+ synthetase [Methanocaldococcus infernus ME] Length = 247 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 92/252 (36%), Positives = 145/252 (57%), Gaps = 23/252 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ V++ N + V++GLSGGIDS+ A + V ALGK+ V ++LP K T + +EDA Sbjct: 9 IRNVVKEANANGVVVGLSGGIDSSTTAFLCVKALGKDKVLGLILPEKTTRKEDIEDAKKV 68 Query: 343 AKALGCKYDVLPIHDLVNHF--FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+ LG KY ++ I D++ F ++ +F ++ P G N+++R+R +L +N Sbjct: 69 AEMLGIKYYIIDITDVLKAFGLYTPTKEF-EKIPDG----NLKARVRMCVLYYYANKYNY 123 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++ T+NKSEI VGYGT YGD++ F P+ L+KT+V +LA LG + Sbjct: 124 LVAGTANKSEIYVGYGTKYGDLACDFMPIAHLFKTEVRELA---------KKLG-----V 169 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE-NEESFINNDQEYNDETVRYV 518 P I+EK PSA L QTD+ L Y ILD I+K E +E I + + + V+ + Sbjct: 170 PKEIIEKPPSAGLWEGQTDEGELGVSYEILDKILKLYEEGKKEEEIAKELSVDLQIVKRI 229 Query: 519 EHLLYGSEYKRR 530 L+ +E+KR+ Sbjct: 230 FDLIKKNEHKRK 241 >gi|237737754|ref|ZP_04568235.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium mortiferum ATCC 9817] gi|229419634|gb|EEO34681.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium mortiferum ATCC 9817] Length = 273 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/270 (34%), Positives = 142/270 (52%), Gaps = 22/270 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ K F KV++GLSGGIDSAL A +A A G ENV IM+PYK +S +S+E A Sbjct: 19 LREEAGKVGFKKVVLGLSGGIDSALVAFLAAKAFGPENVLGIMMPYKTSSKESVEHAKLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + G + ++ I +V+ +F+ + + S + N +R R +IL S A++ Sbjct: 79 IEKTGIRSKLVEITPMVDAYFA-----MNPDMSSLRKGNKMARERMSILFDHSAAENALV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGT +GD + N + DLYKT V+ L+ +P Sbjct: 134 LGTSNKTELLLGYGTQFGDSASAINAIGDLYKTHVWDLSRHMG--------------VPN 179 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEH 520 +++K PSA+L QTD++ L Y + D+I+ R VE ++ +E Y E V + Sbjct: 180 ELIDKKPSADLWEGQTDEQELGYSYRMADEILYRYVEERKTIDEIVKEGYPQEVVEKIIK 239 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 +YKR PV K+ ++ G YP Sbjct: 240 RTKIMQYKRVM-PVIAKVFSRGIGTGFRYP 268 >gi|325662301|ref|ZP_08150910.1| hypothetical protein HMPREF0490_01649 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471303|gb|EGC74526.1| hypothetical protein HMPREF0490_01649 [Lachnospiraceae bacterium 4_1_37FAA] Length = 637 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 129/549 (23%), Positives = 226/549 (41%), Gaps = 70/549 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A N V D+ N+ + R +E QG +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAAVTPNMRVADVEYNVNEICRMIDETTEQGAKVIAFPELCITGYTCGDLFSQEILLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + T + A I VG P + + N+ L+ G ++ + K LPNY EF+ Sbjct: 66 EAKQGLYRIAEYTKEKDALIFVGVPYEVAGKLYNTAAALNHGKVLGLVTKTFLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R F +G + ++ + + + ICED+W Sbjct: 126 EMRQFQAGPQSVQMIETEGHRIPFGPRLLFQAETMKHLVVSAEICEDVWSAVPPSIEAAV 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K + R ++ GQ + + +Y N G+ +L+F G + Sbjct: 186 EGATLIVNCSASNEIAGKEEYRRSLIAGQSARLLAGYVYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ----WNYMSDDSASTMYIPLQEEEADY--- 276 + L + K F+ +E + L + + S YIP + E+ + Sbjct: 246 ENGAILK-ESKRFTSGAIYSEIDVEMLLGERRKNTTFQRKGEYSIPYIPFEIEKEETMLT 304 Query: 277 -----------------NAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC---A 309 C + L+ + N + ++G+SGG+DS L Sbjct: 305 RKIPMSPFVPENKVTRSRQCEEILMIQAVGLKKRMLHTNCQRAVVGISGGLDSTLALLVT 364 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A D LG + + ++ +P T+ ++ ++A + LG +PI + V F + Sbjct: 365 AKTFDLLGIDRSQILSVTMPCFGTTDRTYQNACRLTEKLGATLREIPIQNAVRVHFEDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 Q EE + EN Q+R R ILM L+N + M++ T + SE+++G+ T GD + Sbjct: 425 Q--SEEEHDVTYENAQARERTQILMDLANKTNGMVIGTGDMSELALGWATYSGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQE 481 + KT V+ L + L L IL+ S EL P Q +E Sbjct: 483 VNASVPKTLVYHLVRYYAEECEDPELKGLLF----DILDTPVSPELLPPKDGEIVQKTEE 538 Query: 482 SLPPYPILD 490 ++ PY + D Sbjct: 539 TVGPYELHD 547 >gi|326330350|ref|ZP_08196660.1| putative NH(3)-dependent NAD(+) synthetase [Nocardioidaceae bacterium Broad-1] gi|325951887|gb|EGD43917.1| putative NH(3)-dependent NAD(+) synthetase [Nocardioidaceae bacterium Broad-1] Length = 674 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 143/579 (24%), Positives = 250/579 (43%), Gaps = 103/579 (17%) Query: 6 KIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++A + V D A N IA+AR EE G+ + LF EL +SGY +DLV +++ Sbjct: 13 RVAACTIPISVADPAANAREVIAQARECSEE----GVAVALFPELCLSGYSIDDLVLQRT 68 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + A +AI + + + IVVG P + + VLN+ V++ G ++ V K LPNY Sbjct: 69 LLDAVHAAISAIVVASEELLPVIVVGAPLRHGDRVLNTAVVIHGGEVLGVVPKSYLPNYR 128 Query: 122 EFHEKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKH 162 EF+EKR + +G D + +D+ + ICED+W Sbjct: 129 EFYEKRWYSTGDDADGTIMLGGEEVPLSNGLLFRCTDVKDLVFHVEICEDMWVPVPPSAK 188 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA L +L+ASP + + R +V + +Y G+ +L +DG + Sbjct: 189 AALAGATVLLNLSASPVTVGRSEARRLLVQSASARCAAAYVYTAAGPGESTTDLSWDGQT 248 Query: 221 FCFD-GQ-----------------------------QQLAFQMKHFSEQNFMTEWHYD-- 248 ++ G+ +Q F +E + +E ++ Sbjct: 249 MVYELGELLGETERFPDSARRTVVDVDLERIRAERIRQSTFDDNRRAEGGYHSEIEFELA 308 Query: 249 ---------QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK-NNFHKVIIG 298 +++ ++ ++ DD + L EA YN V L +Q K++IG Sbjct: 309 PPLTGDGLRRKVDRFPFVPDDPEK---LALDCYEA-YNIQVSGLEKRLQSIGPDTKIVIG 364 Query: 299 LSGGIDSA---LCAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS + AA A++ LG+ ++ +P TS + +A +ALG Y+ L Sbjct: 365 VSGGLDSTHALIVAAKAMERLGRPASDILAFTMPGFATSDDTKSNAIHLMEALGTTYETL 424 Query: 354 PIHDLVNHFFSLMSQFLQE--EPSG-------IVAENIQSRIRGNILMALSNHSKAMLLT 404 I +Q L+E P+G + EN+Q+ +R + L ++N ++L Sbjct: 425 DIR-------PTATQMLKEIGHPAGDGEPVYDVTFENVQAGLRTDFLFRIANQRGGIVLG 477 Query: 405 TSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T + SE+++G+ T GD +N + KT + L W + T + + + Sbjct: 478 TGDLSELALGWATYGVGDQMSHYNVNAGVPKTLIQHLIRWVIT---TEQFDGTADEVLQA 534 Query: 464 ILEKSPSAELRPH---QTDQESLPPYPILDDIIKRIVEN 499 IL++ S EL P Q+ ++ + PY + D + V N Sbjct: 535 ILDQEISPELVPGEELQSTEQKIGPYALQDFTLFHTVRN 573 >gi|295695622|ref|YP_003588860.1| NAD+ synthetase [Bacillus tusciae DSM 2912] gi|295411224|gb|ADG05716.1| NAD+ synthetase [Bacillus tusciae DSM 2912] Length = 281 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 147/272 (54%), Gaps = 26/272 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+D V K F KV++GLSGGIDSA+ A +A A + + +++PYK +SP SL+DA Sbjct: 27 LQDEVSKAGFSKVVLGLSGGIDSAVVAYLAARAFDRGQILAVLMPYKTSSPASLDDARRV 86 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + L +++ I +V+ FF+ E S + N +R R +L S A++ Sbjct: 87 VEQLDLPSEIVDITPMVDAFFA-----GDPEASALRRGNRMARERMCVLYDRSARDGALV 141 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+E+ +GYGT +GDM+ NP+ DLYKTQ+ Q+A + LG +P Sbjct: 142 IGTSNKTELLLGYGTQFGDMASAINPIGDLYKTQIRQVARY---------LG-----VPR 187 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETVRYV 518 I EK PSA+L QTD++ L Y +D ++ +V+ + +N + + V Sbjct: 188 EIQEKPPSADLWADQTDEQELGFTYEEVDRLLYCMVDLQYSRRDLVN--LGFAPRFIDAV 245 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 + +++KRR PV K++ ++ G D YP Sbjct: 246 AKRVRINQFKRR-PPVIAKLSRRTIGVDFRYP 276 >gi|291550637|emb|CBL26899.1| NAD+ synthetase [Ruminococcus torques L2-14] Length = 638 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 139/609 (22%), Positives = 257/609 (42%), Gaps = 82/609 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N A EEA + G +++F EL ++GY DL ++ Sbjct: 6 VKVAAATPDIRVADVEFNTQNIINAMEEAQKNGAKILVFPELCVTGYTCSDLFDHSVLLK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + +T+D + VG P + + N ++ G II K LPNY EF+ Sbjct: 66 ASRKALLEIAENTNDKDMLVFVGAPLEVNGKLYNVAAAMNQGEIIGFTTKTFLPNYGEFY 125 Query: 125 EKRTFISG--------YSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F G + I F ++ + ICED+W Sbjct: 126 EMRQFTPGPQTVREITFEGKKIPFGPQILFQAEGMEELVVAAEICEDVWSPVPPSIQAAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R +++GQ + + IY N G+ +L+F G + Sbjct: 186 EGATVIVNCSASDETIGKDTYRRALISGQSARLISGYIYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSE----------------QNFMTEWHYDQQLSQWNYMSDDSASTM-- 265 + L ++ +E +N + ++ L + + +++ + + Sbjct: 246 ENGTVLKESSRYVNEIIYSELDLQRITGERRKNTTFQPLDEETLVRVPFTVEETKTFLTR 305 Query: 266 ------YIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC---A 309 ++P +E+ C + L+ + N ++G+SGG+DS L Sbjct: 306 TFPKKPFVP-SDEQTRAQRCEEILTIQAMGLKKRLAHTNARTAVVGISGGLDSTLALLVT 364 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A A D LG K+++ + +P T+ ++ ++A +K +G +PI D VN F + Sbjct: 365 ARAFDMLGRDKKDIIAVTMPCFGTTDRTYQNACEMSKKVGATLIEVPIADAVNVHFRDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 E + EN Q+R R +LM ++N + M++ T + SE+++G+ T GD + Sbjct: 425 H--DPEDHSVTYENCQARERTQVLMDIANKTWGMVIGTGDLSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + L + + +L+ S EL P Q ++ Sbjct: 483 VNASVPKTLVRHLVKYAADDTKDEAL----KNVLYDVLDTPVSPELLPPKDGDIAQKTED 538 Query: 482 SLPPYPILDDIIKRIV----ENEESF----INNDQEYNDETV-RYVEHL---LYGSEYKR 529 + PY + D + ++ E + F + D EY+ ET+ +++E + ++KR Sbjct: 539 LVGPYELHDFFLYFMLRFGYEPSKIFRIACMTFDGEYDKETIFKWLETFCRRFFSQQFKR 598 Query: 530 RQAPVGTKI 538 P G K+ Sbjct: 599 SCLPDGPKV 607 >gi|94266924|ref|ZP_01290578.1| NAD(+) synthase (glutamine-hydrolyzing) [delta proteobacterium MLMS-1] gi|93452400|gb|EAT03017.1| NAD(+) synthase (glutamine-hydrolyzing) [delta proteobacterium MLMS-1] Length = 297 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 122/262 (46%), Gaps = 26/262 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +KIA+ Q+NPV+GD A N K A G L + EL +SGYPP DL+ + + Sbjct: 4 VAAMKIALLQINPVIGDFAANARKIVDGCGRAAAAGCQLAILPELALSGYPPRDLLERPA 63 Query: 62 FIQACSSAIDTLKSDTHDGG--AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F A++ L D G G V P + +G+ N+ ++ G I+A K LP Sbjct: 64 FRVEHQRALEDLVRQITDIGVLCGAFVARP-EAGKGLANAALLFAGGEILATVGKRLLPA 122 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI----------------CKHL 163 Y F E R F G P FR + LGI ICEDIW C+ + Sbjct: 123 YDVFDESRYFRPGPPVAPCRFRGVNLGITICEDIWNMEGAAVPPADPRGGLPPAYDCEPV 182 Query: 164 KK-------QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 ++ QG + L ++ ASP+ K R E++ G + LP+ VNQVGGQD LIF Sbjct: 183 RELVAAAGEQGIDLLVNIAASPFTVGKDAFREELLAGIATRYRLPVALVNQVGGQDSLIF 242 Query: 217 DGASFCFDGQQQLAFQMKHFSE 238 DG S + + F+E Sbjct: 243 DGGSLALAADGRPLVKAARFAE 264 >gi|24215689|ref|NP_713170.1| NH(3)-dependent NAD(+) synthetase [Leptospira interrogans serovar Lai str. 56601] gi|24196858|gb|AAN50188.1| NH(3)-dependent NAD(+) synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 642 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 158/628 (25%), Positives = 261/628 (41%), Gaps = 109/628 (17%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED-LVFKK 60 ++ +++ L V D GN+ K +R + + DLILF EL ISGY ED F + Sbjct: 1 MQSVRLTSVSLKTKVFDFQGNLEKIKRVLKLEKKS--DLILFPELCISGYGCEDAFYFPR 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + ++ +S I L H IVVG P + N +L G + + K NL + Sbjct: 59 IWKRSWNSLIQLL---PHTENKIIVVGLPIFQNPYLFNCAAVLCNGVVAGIVPKSNLAST 115 Query: 121 SEFHEKRTFISGYSND--------------PIVFRD--IRLGILICEDIWKNSNICKHLK 164 +E R F G + ++F G+ ICED W L Sbjct: 116 GVHYENRWFTRGEESQENFIAPDGSTIPFGSLIFETDHFSFGVEICEDSWVLQKPSIPLA 175 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIV---TGQISHVHLPIIYVNQVGGQD-ELIFDGAS 220 + G + + S AS + K + R +I + + S+V+L + N G + LIF+G S Sbjct: 176 EAGTDLILSPGASHFAFGKQRIRRQIFQESSRRESNVYL---FSNLCGNESGRLIFEGGS 232 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN-----------------------YM 257 + L+ + F + D + SQ + Y+ Sbjct: 233 MIVQNGKLLSESERLFFGDFSLCSNEIDFEASQADRAKNFRPSGNRFSKTKSTEENKIYL 292 Query: 258 SDD--------SASTMYIPLQEEEADY----NACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + + S + I + +EE Y A L L DY+ +N + LSGG DS Sbjct: 293 GIEFPKRAPKVNKSLLEISVSKEEESYLDFTKAVALGLFDYLMYSNTKGYTLSLSGGADS 352 Query: 306 ALCA-------AIAVDALGKENVQTIMLP--------YKYTSPQSLED---AAACAKALG 347 + CA IA LG+ ++ +P Y+ TS S A + AK + Sbjct: 353 SACALLVTAMKKIAKLELGENFFKSKGIPEESILCTLYQSTSNNSDRTKFLAKSLAKEIQ 412 Query: 348 CKYDVLPIHDLVNHFFSLMSQF----LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + L I + +S+ L+ + + +NIQ+R+R I+ L+N + +LL Sbjct: 413 SIHGDLTIDSEIQSISEKISKLTGISLRWDEHNLTLQNIQARVRSPIIWMLANLNGHLLL 472 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP- 462 +T N+SE SVGY T+ GD SG PL + K + + + ++ G P+ P Sbjct: 473 STGNRSEASVGYTTMDGDSSGSIAPLTGVSKEFILKWLRF-----VSEGKDPILPAYPSI 527 Query: 463 -SILEKSPSAELRP---HQTDQESLPPYPILDDI-------------IKRIVENEESFIN 505 I+ PSAEL+P Q D++ L PYP+L I I +++ + N Sbjct: 528 KEIVNSPPSAELKPPEDKQEDEKDLMPYPLLQKIEELFIVRGAGYSEIIQLLSEDSEIQN 587 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 ++ +E+V+ L + +++KR + P Sbjct: 588 LPPKFLEESVKKYISLFHKNQWKRERLP 615 >gi|45656959|ref|YP_001045.1| NH(3)-dependent NAD(+) synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600196|gb|AAS69682.1| NH(3)-dependent NAD(+) synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 642 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 158/628 (25%), Positives = 260/628 (41%), Gaps = 109/628 (17%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED-LVFKK 60 ++ +++ L V D GN+ K +R + + DLILF EL ISGY ED F + Sbjct: 1 MQSVRLTSVSLKTKVFDFQGNLEKIKRVLKLEKKS--DLILFPELCISGYGCEDAFYFPR 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + ++ +S I L H IVVG P + N +L G + + K NL + Sbjct: 59 IWKKSWNSLIQLL---PHTENKIIVVGLPIFQNPYLFNCAAVLCNGVVAGIVPKSNLAST 115 Query: 121 SEFHEKRTFISGYSND--------------PIVFRD--IRLGILICEDIWKNSNICKHLK 164 +E R F G + ++F G+ ICED W L Sbjct: 116 GVHYENRWFTRGEESQENFIAPDGSTIPFGSLIFETDHFSFGVEICEDSWVLQKPSIPLA 175 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIV---TGQISHVHLPIIYVNQVGGQD-ELIFDGAS 220 + G + + S AS + K + R +I + + S+V+L + N G + LIF+G S Sbjct: 176 EAGTDLILSPGASHFAFGKQRIRRQIFQESSRRESNVYL---FSNLCGNESGRLIFEGGS 232 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN-----------------------YM 257 + L+ + F + D + SQ + Y+ Sbjct: 233 MIVQNGKLLSESERLFFGDFSLCSNEIDFEASQADRAKNFRPSGNRFSKTKSTEENKIYL 292 Query: 258 SDD--------SASTMYIPLQEEEADY----NACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + + S + I + +EE Y A L L DY+ +N + LSGG DS Sbjct: 293 GIEFPKRAPKVNKSLLEISVSKEEESYLDFTKAVALGLFDYLMYSNTKGYTLSLSGGADS 352 Query: 306 ALCA-------AIAVDALGKENVQTIMLP--------YKYTSPQSLED---AAACAKALG 347 + CA IA LG+ ++ +P Y+ TS S A + AK + Sbjct: 353 SACALLVTAMKKIAKLELGENFFKSKGIPEESILCTLYQSTSNNSDRTKFLAKSLAKEIQ 412 Query: 348 CKYDVLPIHDLVNHFFSLMSQF----LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + L I + +S+ L+ + + +NIQ+R+R I+ L+N + +LL Sbjct: 413 SIHGDLTIDSEIQSISEKISKLTGISLRWDKHNLTLQNIQARVRSPIIWMLANLNGHLLL 472 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP- 462 +T N+SE SVGY T+ GD SG PL + K + + + ++ G P+ P Sbjct: 473 STGNRSEASVGYTTMDGDSSGSIAPLTGVSKEFILKWLRF-----VSEGKDPILPAYPSI 527 Query: 463 -SILEKSPSAELRP---HQTDQESLPPYPILDDI-------------IKRIVENEESFIN 505 I+ PSAEL+P Q D++ L PYP+L I I +++ + N Sbjct: 528 KEIVNSPPSAELKPPEDKQEDEKDLMPYPLLQKIEELFIVRGAGYSEIIQLLSEDSEIQN 587 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 + +E+V+ L + +++KR + P Sbjct: 588 LPPRFLEESVKKYISLFHKNQWKRERLP 615 >gi|15669543|ref|NP_248355.1| NH(3)-dependent NAD+ synthetase NadE [Methanocaldococcus jannaschii DSM 2661] gi|6093468|sp|Q58747|NADE_METJA RecName: Full=Probable NH(3)-dependent NAD(+) synthetase gi|1591995|gb|AAB99363.1| NH(3)-dependent NAD+ synthetase (nadE) [Methanocaldococcus jannaschii DSM 2661] Length = 259 Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 91/253 (35%), Positives = 140/253 (55%), Gaps = 17/253 (6%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ V++ N + V++GLSGGIDS++ A + V ALGK+ V +++P K T+P+ +E A Sbjct: 18 IREKVEEANANGVVVGLSGGIDSSVTAYLCVKALGKDKVLGLIMPEKNTNPKDVEHAKMV 77 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG KY + I D++ F + E I N+++RIR IL +N ++ Sbjct: 78 AENLGIKYIISDITDILKAFGA-GGYVPTREFDKIADGNLKARIRMCILYYFANKYNLLV 136 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSNKSEI VGYGT +GD++ P+ +L+KT+V +LA + +P Sbjct: 137 AGTSNKSEIYVGYGTKHGDIACDIRPIGNLFKTEVKKLAKYIG--------------VPK 182 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE-SFINNDQEYNDETVRYVEH 520 I+EK PSA L QTD+E L Y LD I+K + + I+ + ET+ YV Sbjct: 183 EIIEKPPSAGLWEGQTDEEELDIKYETLDTILKLYEKGKTPEEIHKETNIPLETINYVFD 242 Query: 521 LLYGSEYKRRQAP 533 L+ +E+KR P Sbjct: 243 LIKKNEHKRTLPP 255 >gi|258648555|ref|ZP_05736024.1| glutamine-dependent NAD+ synthetase [Prevotella tannerae ATCC 51259] gi|260851328|gb|EEX71197.1| glutamine-dependent NAD+ synthetase [Prevotella tannerae ATCC 51259] Length = 654 Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 131/511 (25%), Positives = 218/511 (42%), Gaps = 77/511 (15%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 +K+A A V D N IA RRA E G D + EL ++ Y +DL + Sbjct: 5 IKVAAATPKVKVADCTYNQEQLIAVVRRAEAE----GCDAVCCPELCLTAYTCQDLFQQD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ A+ L++ T ++VG P Q + + N ++ G+I + K +PNY Sbjct: 61 LLLKQSLQALTGLRAATKGLRVIVLVGLPLQLRGRLFNCAAVICDGHIYGIVPKSYIPNY 120 Query: 121 SEFHEKRTFISGYS----------------NDPIVFRD--IRLGILICEDIWKNSNICKH 162 EF+E R F S +S + ++F+ G+ ICED+W + Sbjct: 121 REFYEARWFSSAFSLEKDATITLEGEMIPVSAGLIFQTPCFSFGVEICEDLWAPQPPSTY 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 L +QGAE +F+L+AS K R +V GQ + H IY G+ +L+F GA Sbjct: 181 LAQQGAEIIFNLSASNELTGKHAYRRALVAGQSARCHCGYIYAGAGFGESTQDLVFSGAD 240 Query: 221 FCFDGQQQLAFQMKHFSEQNFM----------------TEWHYDQQ----------LSQW 254 + + +A ++ + F+ T +H Q L Q Sbjct: 241 LIAENGKIIAESQRYTLDAQFIFSDIDVVQLRHERMVNTSFHTSPQPHTLAPTIIALPQR 300 Query: 255 NYMSDDSASTM-------YIPLQEEEADYNACVL-----SLRDYVQKNNFHKVIIGLSGG 302 N S+ A+ + ++P +E AD +L SL +Q N ++G+SGG Sbjct: 301 N--SETKATLLRSVNPLPFVPEGDELADRCEEILHIQSLSLAQRLQHTNAKTAVVGISGG 358 Query: 303 IDSALCAAIAV---DALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS L + D LG++ ++ I +P T+ ++ +A K LG + I Sbjct: 359 LDSTLALLVCTRTFDLLGRDRADIVGITMPGFGTTDRTYNNALKLMKGLGITIREISIRA 418 Query: 358 LV-NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 HF L + + +V EN Q+R R ILM +N +++ T + SE+++G+ Sbjct: 419 ACEQHFKDLGADMASHD---VVYENGQARERTQILMDGANQMGGLVIGTGDLSELALGWA 475 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 T GD + + KT V L ++ H Sbjct: 476 TYNGDHMSMYGVNASIPKTLVRHLVAYVAQH 506 >gi|73542295|ref|YP_296815.1| NAD synthetase [Ralstonia eutropha JMP134] gi|72119708|gb|AAZ61971.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase:NAD+ synthase [Ralstonia eutropha JMP134] Length = 682 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 148/576 (25%), Positives = 242/576 (42%), Gaps = 107/576 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N A+ +A +QG L+ F EL +S Y +DL +++ + A Sbjct: 15 RVAVGVPVCRVADPAFNAAETIALATQAAKQGAVLVAFPELGLSAYTCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +A+ T+ + A ++VG P + + + N V++ G ++ V K LPNY EF+E Sbjct: 75 CEAALGTIVEASRKLSAAMIVGMPLRVEHQLFNCAVVVARGRVLGVVPKSYLPNYWEFYE 134 Query: 126 KRTFISGYSNDPIVFRDIRL---------GIL--------------ICEDIWKNSNICKH 162 R F D IRL G+L ICED+W Sbjct: 135 ARQFSEA---DNAATDSIRLLGQDVPFGAGLLFEIEDIPFFRFHAEICEDVWVPIPPSSF 191 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG-A 219 GA L +L+AS K RH++V+ Q + +Y + G+ +L +DG A Sbjct: 192 AALAGATVLVNLSASNIVIGKSGYRHQLVSQQSARCLAAYLYTSAGKGESSTDLAWDGQA 251 Query: 220 SFCFDGQ-----------------------------QQLAF---------QMKHFSEQNF 241 C +G+ Q+ F ++ F F Sbjct: 252 LICENGELLAESERFADTSHVLFADVDVERLSRERMHQVTFGHSVRRHKAEVDKFRVVRF 311 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKV 295 E D+ L + A Y+P + D YN V +L + + KV Sbjct: 312 PLEVSRDKALP----LERKVARFPYVPADPRQRDERCHEVYNIQVQALVQRLSASKISKV 367 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC-- 348 +IG+SGG+DS L A A+D LG + N+ +P TS ++L A + +GC Sbjct: 368 VIGVSGGLDSTHALLVCAKAMDRLGLPRSNILAYTMPGFATSDRTLRQARQLMELVGCTA 427 Query: 349 -KYDVLP-----IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + D+ P + DL +H ++ E+ + EN+Q+ R N L L+NH+ A++ Sbjct: 428 REIDIRPSCLAMLKDL-DHPYA-----RGEKVYDVTFENVQAGERTNHLFRLANHNGAIV 481 Query: 403 LTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 + T + SE+++G+ T GD +N + KT + L W G G +EV+ Sbjct: 482 IGTGDLSELALGWCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQVGDSG--SEVL- 538 Query: 462 PSILEKSPSAEL-------RPHQTDQESLPPYPILD 490 +L+ S EL P Q + ++ PY + D Sbjct: 539 IHVLDTDISPELVPGDSNHGPEQKTESTIGPYELQD 574 >gi|332652501|ref|ZP_08418246.1| glutamine-dependent NAD+ synthetase [Ruminococcaceae bacterium D16] gi|332517647|gb|EGJ47250.1| glutamine-dependent NAD+ synthetase [Ruminococcaceae bacterium D16] Length = 641 Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 130/561 (23%), Positives = 238/561 (42%), Gaps = 77/561 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A V D N + EA++QG+ ++ EL ++GY DL + ++ Sbjct: 7 IKVAAGTPKIRVADCRYNAEQIFTLMREADKQGVKVLCLPELCLTGYTCGDLFLHDTLLK 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + T+ T + VG P + Q + N ++ G I+ + KI++PNY E Sbjct: 67 GAEEGLQTILEATRNLELVAAVGLPVRAQYDNKLYNCAALIQKGEILHLVPKIHIPNYGE 126 Query: 123 FHEKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHL 163 F+E R F SG D V ++ LG+ ICED+W L Sbjct: 127 FYEARWFASGAGVDTTVTLCGQQVCMSTNETFACQEMPNLILGVEICEDLWAPEPPSAGL 186 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 + GA + +L+AS K R ++VTGQ +Y + G+ +L+F G + Sbjct: 187 ARSGATIILNLSASNETVGKAAYRRQLVTGQSGRQVCGYVYADAGEGESTTDLVFAGHNM 246 Query: 222 CFDGQQQLAFQMKHFS---------------EQNFMTEWHYDQQLSQW----------NY 256 + LA + F+ E+ MT + D W Sbjct: 247 IAENGALLA--ERRFANGLTISEIDVDRLAYERRRMTSFTPDPDKEYWRGEFSLTLEETR 304 Query: 257 MSDDSASTMYIPLQE----EEADYNACV--LSLRDYVQKNNFHKVIIGLSGGIDSALC-- 308 ++ + + ++P E E + C+ L L+ ++ + ++GLSGG+DS L Sbjct: 305 LTRFVSPSPFVPQDEGDRAERCNEILCIAALGLKKRLEHTHAKTAVVGLSGGLDSTLAVL 364 Query: 309 -AAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 A+A+ L + ++ + +P T+ ++ +A A+ LGC + I + V F Sbjct: 365 ITAVAMQMLDRPASDIIAVTMPCFGTTDRTKSNAVLLAERLGCTLRTIDIGNAVKIHFKD 424 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + Q +++ + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 425 IGQSMEDH--SVTFENGQARERTQVLMDIANQTGGLVIGTGDLSELALGWCTYNGDHMSN 482 Query: 426 FNPLKDLYKTQVFQLASW---------RNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 + + KT V L S+ R + S + L + P +L P+ E + Sbjct: 483 YAVNAGIPKTLVRHLVSFISDDKAQEDRQLSDVLSDI--LDTPVSPELL---PAIEGKIS 537 Query: 477 QTDQESLPPYPILDDIIKRIV 497 Q ++ + PY + D + I+ Sbjct: 538 QKTEDLVGPYELHDFFLYHIL 558 >gi|225574649|ref|ZP_03783259.1| hypothetical protein RUMHYD_02726 [Blautia hydrogenotrophica DSM 10507] gi|225038141|gb|EEG48387.1| hypothetical protein RUMHYD_02726 [Blautia hydrogenotrophica DSM 10507] Length = 635 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 132/550 (24%), Positives = 238/550 (43%), Gaps = 73/550 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N + R E ++G +++F EL I+GY DL +++ ++ Sbjct: 6 VKVAAATPDVRVADCRHNGNEIIRLIREMEKEGAKVMVFPELCITGYTCADLFWQELLVR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + +T D A I VG P + + N + G ++ + KI+LPNY EF+ Sbjct: 66 SAREELVRIVQETSDVDALIFVGLPFEHSGKLYNVAAAVSHGEVLGMVPKIHLPNYGEFY 125 Query: 125 EKRTFISG--------YSNDPIVFRD-----------IRLGILICEDIWKNSNICKHLKK 165 E+R F SG + + ++F + + ICED+W S + Sbjct: 126 EQRNFASGAGVCDLAILNGEEVLFGSELIFACTNMPKLTVAAEICEDLWVTSPPSANHAA 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R +V GQ + + +Y N G+ +L+F G + Sbjct: 186 AGANLIVNLSASSEAVGKDSYRKSLVRGQSARLVCGYVYANAGEGESTQDLVFGGQNLIA 245 Query: 224 DGQQQLAFQMKHF---------------SEQNFMTEWHYDQQLSQW---------NYMSD 259 + LA + K F SE+ MT + D Q ++ Sbjct: 246 ENGALLA-EGKRFQNEIVYGDVDFERISSERRRMTTFESDLGTYQMVPFCLTVEETKLTR 304 Query: 260 DSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AA 310 A ++P E++ D N + L+ + + + ++G+SGG+DS L A Sbjct: 305 QFAPNPFVPSNEKDRDDRCDEILNIQAMGLKKRLAHIHGERAVVGISGGLDSTLALLVTA 364 Query: 311 IAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 D LG +EN+ + +P T+ ++ +A + LG + I + V F + Q Sbjct: 365 RTFDLLGLPRENILAVTMPCFGTTDRTYRNACELTRRLGATLQEVDIKEAVRVHFENIGQ 424 Query: 369 FLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 +P+ + EN Q+R R +LM L+N +++ T + SE+++G+ T GD + Sbjct: 425 ----DPALHDVTYENSQARERTQVLMDLANQCNGLVVGTGDLSELALGWATYNGDHMSMY 480 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L + + T L++++ +L+ S EL P Q + Sbjct: 481 GVNASVPKTLVRHLVHY---YARTCEDERLSQIL-LDVLDTPVSPELLPPEDGNISQKTE 536 Query: 481 ESLPPYPILD 490 + + PY + D Sbjct: 537 DLVGPYELHD 546 >gi|254519746|ref|ZP_05131802.1| NAD+ synthetase [Clostridium sp. 7_2_43FAA] gi|226913495|gb|EEH98696.1| NAD+ synthetase [Clostridium sp. 7_2_43FAA] Length = 634 Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 149/624 (23%), Positives = 266/624 (42%), Gaps = 96/624 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V DI N+ +EA + G I+F EL I+ Y DL + S ++ Sbjct: 4 IKVAAACPMTRVADIDYNLENILICLDEAYKNGAKSIVFPELAITSYTCSDLFMQYSLLE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + AI+ L + I +G P + + N I+ G ++ + K +PNYSEF+ Sbjct: 64 KANLAIEKLIKKSAGLDMLIAIGAPLSFKNVLFNCAYIIFDGKLLGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISG-----------YSNDP-----IVFRDIR--LGILICEDIWKNSNICKHLKKQ 166 EKR F G + D ++F R G ICED+W +L Sbjct: 124 EKRWFSEGLGIIDEKVDFAFQKDVPFGTNLIFTSGRYSFGFEICEDLWVTIPPSSYLSLL 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDGASF-- 221 GA + +L+AS +K R +++ Q + IY + G + +L+F G Sbjct: 184 GANIIGNLSASNELVSKKDYREALISNQSARCMSAYIY-SSAGVHESTTDLLFSGHMLIA 242 Query: 222 ---------------------CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD 260 C D + + ++K+ S ++ ++ ++ +NYM+ Sbjct: 243 ENGTMLKENERFQRNNEVIYSCIDVFRLNSERLKNISFRDASRIVPFEAEVINFNYMN-- 300 Query: 261 SASTM-----------YIP----LQEEEAD--YNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +T+ ++P L+EE +N +L ++ N K +IG+SGG+ Sbjct: 301 --TTINNFDRFIDKHPFVPSNAKLREERCKEIFNIQAAALAKRMEHTNLKKAVIGISGGL 358 Query: 304 DSALCAAIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + V L +N+ TI +P T+ ++ +A K LGC + I Sbjct: 359 DSTLALLVVVKTFELLGLDNKNIVTITMPGFGTTDRTYNNALTLCKELGCDLREINIVKA 418 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T Sbjct: 419 ALQHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTY 476 Query: 419 YGDMSGGF--NPL--KDLYKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL 473 GD + NP K L + V +A +S ++ L + + + P +L KS E+ Sbjct: 477 NGDHMSMYSVNPSIPKTLVRYLVRYVAEKESSTEVSDTLLDILDTPVSPELLPKSDKGEI 536 Query: 474 RPHQTDQESLPPYPILDDIIKRIVEN-----------EESFINNDQEYNDETVRYVEHLL 522 Q ++ + PY + D + ++N E++F D +E ++++ + Sbjct: 537 T--QKTEDIVGPYELHDFFLYHFIKNGSSKERIKLLAEKAF--KDDYSKEEIAKWLDKFI 592 Query: 523 Y---GSEYKRRQAPVGTKITAKSF 543 Y ++KR P G K+ + S Sbjct: 593 YRFFTQQFKRSALPDGPKVGSISL 616 >gi|255036591|ref|YP_003087212.1| NAD+ synthetase [Dyadobacter fermentans DSM 18053] gi|254949347|gb|ACT94047.1| NAD+ synthetase [Dyadobacter fermentans DSM 18053] Length = 686 Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 151/627 (24%), Positives = 250/627 (39%), Gaps = 123/627 (19%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A +N N A EA +Q + L+ EL ISGY +D F ++ Sbjct: 4 IKVASGVVNQTPMAWEANTRNITEAIREARKQQVSLLCLPELCISGYGCDDYFFAPDMVE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +T G + VG P + + N+ ++ I K NL N + Sbjct: 64 QAQRCFLEIVDET--AGMIVAVGLPLRHNGSLYNAACLISNKQIAGFYCKQNLANNGIHY 121 Query: 125 EKRTF-----------------------ISGYSNDPIV--FRDIRLGILICEDIWKNSNI 159 E R F I + PI+ +++ ICED W + Sbjct: 122 EARWFKPWQPGVVESIEVNQMFYPIGDVIFDVAAGPILGGSHGVKIAFEICEDGWVANRP 181 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + ++G + + + +AS + NK R ++V IY N +G + ++DG Sbjct: 182 ARRHYERGVDIILNPSASHFAFNKFMVREKLVVDASRSFSCSYIYTNLLGNEAGRAVYDG 241 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFM-------TEWHYDQQLSQWNYMSDDSASTMYIP--- 268 + LA FS ++F+ TE+ Q+ Q T +P Sbjct: 242 DAMIASNGDLLA-SSPRFSYEDFLITTAVIDTEYTRLSQI-QSKITVPPKERTWRVPARY 299 Query: 269 -----------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 L+EEE C L+L DY++K+ + I LSGG DS Sbjct: 300 DFPEIEPVLPQVPDIEPFEKGGALKEEEFARAEC-LALFDYLRKSRSNGFTISLSGGADS 358 Query: 306 ALCAAIA--------------------------VDALGKENVQTIMLPYKY-----TSPQ 334 C A+ DA +E++ +++ Y +S Sbjct: 359 CACTALCGLMIRLADESIGMERFKQKLSYIKDIQDAKTEEDLAKVLIHNIYQGTENSSSD 418 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLM----SQFLQEEPSGIVAENIQSRIRGNI 390 +LE A + A+++G + + I+ LV + L+ + L E I +NIQ+R+R Sbjct: 419 TLESAQSLAESIGSTFYNVNINGLVETYKGLIEDQIGRKLTWEQDDIALQNIQARVRAPG 478 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW------- 443 + L+N S +LL TSN+SE +VGY T+ GD SG +PL + K + Q W Sbjct: 479 VWLLTNLSNHLLLATSNRSEAAVGYATMDGDTSGSISPLAGIDKHYLRQWLRWLETVGCE 538 Query: 444 -RNSHGITSGLGPLTEVIPPSILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIVEN 499 + H GL + + P+AELRP QTD+ L PY L+D+ + + Sbjct: 539 VKGRHIRIEGLKKVNSL--------QPTAELRPLAQTQTDEADLMPYEFLNDLEGLAIRD 590 Query: 500 EESFINNDQEYNDETVRYVEHLLYGSE 526 ++S + + Y + VRY + +Y +E Sbjct: 591 KKSPL---ESYRNLYVRYKD--IYSTE 612 >gi|310779496|ref|YP_003967829.1| NH(3)-dependent NAD(+) synthetase [Ilyobacter polytropus DSM 2926] gi|309748819|gb|ADO83481.1| NH(3)-dependent NAD(+) synthetase [Ilyobacter polytropus DSM 2926] Length = 273 Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 100/285 (35%), Positives = 157/285 (55%), Gaps = 40/285 (14%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 N + +++ + K F KV++GLSGGIDSAL AA+A ALG ENV +M+PYK +S +S+ Sbjct: 13 NVLIDFIKEEIGKAGFEKVVLGLSGGIDSALVAALAAKALGPENVLGVMMPYKSSSKESV 72 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--SGIVAENIQSRIRGNILMAL 394 E A +A G K +++ I D+V+ +F ++ P + N +R R IL Sbjct: 73 EHAKLLVEATGIKTELMEITDMVDAYF-------EKNPDMDNMRKGNKMARERMTILYDR 125 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 S +A++L TSNK+EI +GY T +GD + NP+ DLYKT V++L + LG Sbjct: 126 SAKERALVLGTSNKTEILLGYSTQFGDSASAINPIGDLYKTHVWEL---------SERLG 176 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN--------EESFIN 505 +P I+ K PSA+L Q+D+ L Y + D I+ R+++ EE F Sbjct: 177 -----VPKEIIAKKPSADLWEGQSDENELGFSYNMADRILYRLIDERYERSELIEEGF-- 229 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 ++ D +R ++ S+YKR+ P+ KI+ ++ GR+ YP Sbjct: 230 -EEWIVDTIIRKIKL----SQYKRK-LPLIAKISRRTIGREFRYP 268 >gi|284035572|ref|YP_003385502.1| NAD+ synthetase [Spirosoma linguale DSM 74] gi|283814865|gb|ADB36703.1| NAD+ synthetase [Spirosoma linguale DSM 74] Length = 700 Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 151/611 (24%), Positives = 247/611 (40%), Gaps = 115/611 (18%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K LK+A LN + N A EEA RQ + L+ E ISGY ED F ++ Sbjct: 7 MKLLKVAAGVLNQIPLAWEHNKQNIINAIEEAQRQNVSLLCLPEFCISGYGCEDAFFAQN 66 Query: 62 FI-QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I Q+ +S ++ ++ H + VG P + ++ ++ I+ K + N Sbjct: 67 TIDQSIASLLEIVE---HTNDIVVAVGLPLRHNNRTFDTACLIANKRILGFTAKQYMANN 123 Query: 121 SEFHEKRTF--ISGYSNDPIVFRD--------------IRLGILICEDIWKNSNICKHLK 164 +E R F Y D I D IR+G ICED W S + L Sbjct: 124 GVHYETRWFQPWPPYIRDEIKIGDFTYPFGDVVYDLSGIRIGFEICEDAWVASRPGRLLY 183 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCF 223 ++G + + + AS + K + R V + +Y N +G + +I+DG + Sbjct: 184 ERGIDIILNPTASHFAFLKSQVRERFVVDASRSFGVSYVYSNMLGNEAGRIIYDGDAMVA 243 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP--------------- 268 + L + E + D + ++ N + + + P Sbjct: 244 SNGELLVSGPRLSYEDFVIVPAVIDVEATRLNQTQNRANIALAYPNLRVTDRFDWPEIAP 303 Query: 269 ---------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI-- 311 L+EEE A L L DY++K+ ++ LSGG DS+ AA+ Sbjct: 304 VIQKAQLEGWERGGYLKEEEF-ARAVALGLFDYLRKSRSQGYVLSLSGGADSSAIAALVF 362 Query: 312 -----AVDALGKENVQT---------------------IMLPYKYT---SPQSLEDAAAC 342 AV+ +G + V+ + + Y+ T S + A Sbjct: 363 LMIRMAVENIGMDGVKKKLGYIKAIQDCTTAEEVVGKLLTVMYQGTENSSDDTFNSAKEL 422 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG----IVAENIQSRIRGNILMALSNHS 398 A +G K+ + I+ LV + L+ + L + S + +NIQ+R+R + L+N + Sbjct: 423 ADDIGAKFLNININGLVETYTGLIEEQLGRKLSWDTDDLALQNIQARVRAPSIWMLANIN 482 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP--- 455 A+LLTTSN+SE +VGY T+ GD +G +P+ + K + W + G+ P Sbjct: 483 NALLLTTSNRSEAAVGYATMDGDTAGSISPITGIDKHFLRSWLRWLETVGLNVKNAPEPT 542 Query: 456 -----LTEVIPPSILEK----------SPSAELRPH---QTDQESLPPYPILDDIIKRIV 497 T P L K P+AELRP QTD++ L PY +L+ I Sbjct: 543 DRTSLATSPASPDELIKVKGLNAVNNLQPTAELRPQDKKQTDEDDLMPYDVLNSI----- 597 Query: 498 ENEESFINNDQ 508 EE+ I + Q Sbjct: 598 --EETAIRDKQ 606 >gi|78189245|ref|YP_379583.1| NAD synthetase [Chlorobium chlorochromatii CaD3] gi|78171444|gb|ABB28540.1| NH(3)-dependent NAD(+) synthetase [Chlorobium chlorochromatii CaD3] Length = 276 Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 91/271 (33%), Positives = 144/271 (53%), Gaps = 26/271 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR K F V++GLSGGIDSA+ +AV ALG NV I++PY+ +S SLE A+ Sbjct: 20 LRRETGKFGFTSVVLGLSGGIDSAVVCELAVRALGAPNVLAILMPYETSSSASLEHASLM 79 Query: 343 AKALGCKYDVLPIHDLVNHFFSLM--SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 + LG + + I + + FF+ + +Q L+ N+ +R R L +S Sbjct: 80 VQKLGISAETIAITSVAHAFFASIPDNQLLRR-------GNVMARTRMMYLYDISARDGR 132 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +++ TSNK+E+ +GYGTL+GDM+ NP+ DLYKTQ++ G+ LG I Sbjct: 133 LVMGTSNKTELMLGYGTLFGDMASAINPIGDLYKTQIW---------GLARHLG-----I 178 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE-NEESFINNDQEYNDETVRYV 518 P I++K+PSA+L Q+D+ Y +D ++ +VE + ++ V Sbjct: 179 PSQIIDKAPSADLWEGQSDEADFGFSYEEVDRLLYMMVELRMDKATMLAAGVSEALYERV 238 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 ++ ++YK R PV KI+A++ G D Y Sbjct: 239 RRMVVRNQYK-RMMPVIAKISARTPGVDFRY 268 >gi|110799343|ref|YP_695760.1| NAD synthetase [Clostridium perfringens ATCC 13124] gi|110673990|gb|ABG82977.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens ATCC 13124] Length = 635 Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 143/625 (22%), Positives = 267/625 (42%), Gaps = 98/625 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ A + D N+ + A + + +++F EL IS Y DL K I+ Sbjct: 4 IKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNKKLIE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C+ AI L + + VG P + + N ++ G ++ + K +PNYSEF+ Sbjct: 64 NCNLAIKNLVEFSKGKDILMAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGYS-----------------NDPIV-FRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G++ D I F+++++G ICED+W +L Sbjct: 124 EKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNLALM 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDGAS--- 220 GA + +L+AS +K R +V Q + IY + G + +L+F G Sbjct: 184 GANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIY-SSAGVHESTTDLLFSGHMIIA 242 Query: 221 -------------------------FCFDGQ--QQLAFQMKHFSEQN------FMTE--- 244 F D + + ++F+ F+E N F E Sbjct: 243 ENGTIIKENNRFKRENDLLTGIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLENTE 302 Query: 245 -WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++D+++ + ++ + Y E N +L ++ N K +IG+SGG+ Sbjct: 303 IKNFDREIDKHPFL----PKSQYAMEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGL 358 Query: 304 DSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + V + +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 359 DSTLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNA 418 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T Sbjct: 419 ALQHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTY 476 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEVIPPSILEKSPSAEL 473 GD ++ + KT V L ++ +H I++ L L + P +L K ++ Sbjct: 477 NGDHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEALLDILDTPVSPELLPKDKEGKI 536 Query: 474 RPHQTDQESLPPYPILDDIIKRIVEN-----------EESFINNDQEYNDETV-RYVEHL 521 Q ++ + PY + D + +++ +E+F N +YN+ET+ ++++ Sbjct: 537 A--QKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKN---DYNEETLKKWLDKF 591 Query: 522 L---YGSEYKRRQAPVGTKITAKSF 543 + + ++KR P G K+ + S Sbjct: 592 IRRFFTQQFKRSALPDGPKVGSISL 616 >gi|124003521|ref|ZP_01688370.1| NH(3)-dependent NAD(+) synthetase [Microscilla marina ATCC 23134] gi|123991090|gb|EAY30542.1| NH(3)-dependent NAD(+) synthetase [Microscilla marina ATCC 23134] Length = 623 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 159/620 (25%), Positives = 263/620 (42%), Gaps = 116/620 (18%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +LKI A LN D N+ + A E+A +D++ EL I+GY ED+ Sbjct: 1 MTRLKIGGAALNQTPLDWENNLKNIQNAIEQAKDASVDVLCLPELCITGYGCEDMFLSDW 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ + + + VG P + + + V ++ I+ K NL N Sbjct: 61 VADKALGQLNEIAQWCTN--IVVAVGLPVKFDNDLYDCVCLMHNQEILGFSAKQNLANDG 118 Query: 122 EFHEKRTFIS-----------GYSNDPI-----VFRDIRLGILICEDIWKNSNICKH-LK 164 +E R F + G P + ++I++G+ ICED W H L Sbjct: 119 VHYEPRWFKAWKAGRLEMLKVGTKKYPFGDIIYIAKNIKIGLEICEDAWSGQKRPAHQLN 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCF 223 K+ + + +AS + K K R +++ + +L Y N +G + ++I+DG F Sbjct: 179 KRKVNLILNPSASHFAFAKAKNREKLMLEANAPAYL---YCNLLGNEAGKMIYDGQVFVT 235 Query: 224 DGQQQLAF-QMKHFSEQNFMTEWHYDQQLSQWNYMS-DDSASTMYIPLQEEEADYN---- 277 G Q + Q+ F + +T +Q ++ + ++S +T+ E A +N Sbjct: 236 QGNQVIGRNQLFSFKNVDLLT--------TQVDFKNPENSDATL------EAAQFNKNQE 281 Query: 278 ---ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV--------------------- 313 L+L DY++K+ I+ LSGG DS+ CA + Sbjct: 282 FVQVLSLALFDYMRKSRSKGYILSLSGGADSSTCAVMVAEMVKRGVAELGWEAFLEKSGV 341 Query: 314 --------DALGKEN-----VQTIMLPYKYTSP-----QSLEDAAACAKALGCKYDVLPI 355 DAL +E+ + +L Y S Q+L A A+ LG + I Sbjct: 342 AFDEEQMKDALREEDPPLRHIVKHLLTCVYQSSDNSSYQTLNSAKLLAQDLGATFHHWSI 401 Query: 356 HDLVNHFFS----LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + V + +++Q L I +NIQ+R R I+ L+N A+L+ TSN+SE Sbjct: 402 KEDVTSYSKKIEYIINQSLSWHKHDIALQNIQARARSPIIWMLANIKGALLIATSNRSEG 461 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 SVGY T+ GD SGG +P+ + K + + W + LG E+ + L+ P+A Sbjct: 462 SVGYTTMDGDTSGGISPIAGVDKHFIREWLKW-----AETSLGQ-KELRHVNALQ--PTA 513 Query: 472 ELRP-------HQTDQESLPPYPILDDI----------IKRIVENEESFINNDQEYNDET 514 ELRP QTD++ L PY +L I K+I E +S + D E E Sbjct: 514 ELRPKDDDSTQQQTDEKDLMPYEVLQAIERLTLYERLSPKQIFEQLQSEV-ADIELLKEH 572 Query: 515 VRYVEHLLYGSEYKR-RQAP 533 +R L +++KR R AP Sbjct: 573 IRKFFRLWSRNQWKRERFAP 592 >gi|242399734|ref|YP_002995159.1| NH(3)-dependent NAD(+) synthetase [Thermococcus sibiricus MM 739] gi|259511199|sp|C6A5B5|NADE_THESM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|242266128|gb|ACS90810.1| NH(3)-dependent NAD(+) synthetase [Thermococcus sibiricus MM 739] Length = 254 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/271 (35%), Positives = 145/271 (53%), Gaps = 28/271 (10%) Query: 275 DYNACVLSLRDYVQK----NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 DY + L ++Q+ +N VI+G+SGG+DSA A +A A+GKE V +++PY Sbjct: 5 DYAKVITKLVSFIQEKVEESNVKGVILGISGGVDSATVAYLAARAIGKEKVLGLVMPYHI 64 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + +EDA LG Y V+ I +VN F + L E + + NI SR R + Sbjct: 65 N--RDVEDALLVCNNLGINYKVINIKSIVNEF----EKNLDFELNNVSRGNIMSRTRMIL 118 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L A +N ++L TSN+SE GY T +GD + + PL +LYKT+V+ +A Sbjct: 119 LYAHANSKNYLVLGTSNRSEFLTGYFTKWGDSASDYAPLINLYKTEVWNIARI------- 171 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE 509 LG +P I+ K PSA L QTD++ L Y +LD+I+ R+V+ + N +E Sbjct: 172 --LG-----VPNEIINKKPSAGLWEGQTDEKDLGITYKLLDEILYRLVDLKMKKENIARE 224 Query: 510 YND--ETVRYVEHLLYGSEYKRRQAPVGTKI 538 N V YVE L+ SE+KR+ P+G +I Sbjct: 225 LNIPLNKVEYVESLIKKSEHKRK-LPIGPEI 254 >gi|194335968|ref|YP_002017762.1| NAD+ synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|238693404|sp|B4SEZ8|NADE_PELPB RecName: Full=NH(3)-dependent NAD(+) synthetase gi|194308445|gb|ACF43145.1| NAD+ synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 277 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/267 (34%), Positives = 146/267 (54%), Gaps = 26/267 (9%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 ++K F V++GLSGGIDSA+ +AV ALG++NV +M+PY +S +SLE A K L Sbjct: 25 LRKFGFSSVVLGLSGGIDSAVVCELAVRALGRQNVLGLMMPYASSSMESLEHAELMIKKL 84 Query: 347 GCKYDVLPIHDLVNHFFSLM--SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 G + + +PI +V+ FFS + +Q L+ NI +R R +L +S ++ Sbjct: 85 GIQAEEMPITPVVDAFFSSVPENQLLRR-------GNIMARTRMILLYDVSARDGRLVTG 137 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNK+E+ +GYGTL+GDM+ NP+ DLYKTQV G+ L IP + Sbjct: 138 TSNKTELLLGYGTLFGDMASAINPIGDLYKTQV---------RGLARHLA-----IPEPL 183 Query: 465 LEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE-ESFINNDQEYNDETVRYVEHLL 522 + K+PSA+L Q+D++ L Y +D ++ ++E + Q + V ++ Sbjct: 184 IVKAPSADLWEGQSDEDDLGFSYEAVDLLLYMMLEKRMDKHAILGQGIEEPFYDRVRKMV 243 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLY 549 ++YK R PV K++ ++ G D Y Sbjct: 244 VRNQYK-RMMPVIAKLSGRTPGIDFRY 269 >gi|256810614|ref|YP_003127983.1| NAD+ synthetase [Methanocaldococcus fervens AG86] gi|256793814|gb|ACV24483.1| NAD+ synthetase [Methanocaldococcus fervens AG86] Length = 253 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 93/253 (36%), Positives = 140/253 (55%), Gaps = 17/253 (6%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V++ + V+IGLSGGIDSA+ A + V ALGK V I++P K T+P+ +E A Sbjct: 12 IKEKVEEAKANGVVIGLSGGIDSAVTAYLCVKALGKYRVLGIIMPEKNTNPKDVEHAKMV 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG KY + I D++ F + E I N+++RIR IL +N ++ Sbjct: 72 AENLGIKYTISDITDILKAFGA-GGYVPTREFDKIADGNLKARIRMCILYYFANKYNLLV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSNKSEI VGYGT YGD + P+ +L+KT+V +LA + LG +P Sbjct: 131 AGTSNKSEIYVGYGTKYGDTACDIRPIGNLFKTEVRELAKY---------LG-----VPK 176 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE-ESFINNDQEYNDETVRYVEH 520 I+ K PSA L QTD+E L Y LD I+K E + + I+ + + + V +V + Sbjct: 177 EIINKPPSAGLWEGQTDEEELGIKYETLDKILKLYEEGKSKEEISKELNISVDVVEHVFN 236 Query: 521 LLYGSEYKRRQAP 533 L+ +E+KR P Sbjct: 237 LIKKNEHKRTLPP 249 >gi|118443772|ref|YP_878612.1| NAD synthetase [Clostridium novyi NT] gi|118134228|gb|ABK61272.1| glutamine-dependent NAD+ synthetase [Clostridium novyi NT] Length = 637 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 146/620 (23%), Positives = 251/620 (40%), Gaps = 88/620 (14%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I +A PVV GDI N+ + + A ++ L++ EL I+ Y DL ++ I+ Sbjct: 4 IRVASACPVVNVGDIKFNVENIKNCIDLALKENSKLVILPELSITAYTCADLFLNQTLIE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I VG P + N I+ G I+ + K LPNYSEF+ Sbjct: 64 KSMEGIKDICDFSLDKDILIAVGAPLLFNYSLYNCAYIIYNGKILGIVPKNYLPNYSEFY 123 Query: 125 EKRTFISG-----------YSNDP-----IVFR--DIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G + ND ++F + + G ICED+W +L Sbjct: 124 EKRWFTEGHDIISEKVNLPFQNDVPFGINLLFTSGNFKFGFEICEDLWTVIPPSSYLALM 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R +V+ Q + +Y + +++F G + Sbjct: 184 GANIIGNLSASNELVSKADYRKFVVSSQSARCMSSYVYASSGVFESTTDVVFSGHLMIAE 243 Query: 225 GQQQLA-----------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS 261 + L +MK+ S ++ H +N+ + Sbjct: 244 NGRILKSNNRFQRENEVITSIIDVDKINNMRMKNLSFRDSKRACHIKPLEISFNFKDTNI 303 Query: 262 AST-------MYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++P E E + +N L + KVI+G+SGG+DS L Sbjct: 304 CNFDRKINKHPFVPSNEHEREVRSKEIFNIQSAGLAKRLNHTGLKKVIVGISGGLDSTLA 363 Query: 309 AAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 +AV+ L ++N+ TI +P T+ ++ +A K LG + + I D F Sbjct: 364 LLVAVNTFDLLKLPRKNIITITMPGFGTTDRTYNNAVDLCKKLGTDFREINIVDSCLQHF 423 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + E + EN+Q+R R ILM L+N A+L+ T + SEI++G+ T GD Sbjct: 424 KDIGH--PAEIHDVTYENVQARERTQILMDLANKEAALLVGTGDLSEIALGWATYNGDHM 481 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD---- 479 ++ + KT V L + H + I IL+ S EL P D Sbjct: 482 SMYSVNCSIPKTLVRYLVKFSAEHNSEKDISD----ILIDILDTPVSPELLPKDKDGKIA 537 Query: 480 ---QESLPPYPILDDIIKRIVENEESFIN--------NDQEYNDETV-RYVEHLL---YG 524 ++ + PY + D + + +F +Y++ET+ ++++ + + Sbjct: 538 QKTEDIVGPYELHDFFLYYFMRQNATFEKILYLAKEAFKDDYDEETIKKWLDKFMRRFFT 597 Query: 525 SEYKRRQAPVGTKITAKSFG 544 ++KR P G K+ S Sbjct: 598 QQFKRSAIPDGPKVGTISLS 617 >gi|167772565|ref|ZP_02444618.1| hypothetical protein ANACOL_03943 [Anaerotruncus colihominis DSM 17241] gi|167665043|gb|EDS09173.1| hypothetical protein ANACOL_03943 [Anaerotruncus colihominis DSM 17241] Length = 637 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 139/615 (22%), Positives = 241/615 (39%), Gaps = 83/615 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+A V D N A A A + G L++ EL ++GY DL +++ I+ Sbjct: 6 IKVAVATPEIRVADCVFNTAAAVGMARRAAQCGARLLVLPELCLTGYTCGDLFLRETLIE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ +L + T IV G P + N ++ G ++ + K +LPNY EF+ Sbjct: 66 GARAALASLCAQTRALPVLIVAGLPVVSGAKLYNCAAVVYQGRVLGIVPKTHLPNYGEFY 125 Query: 125 EKR----------TFISGYSNDPIVF----------RDIRLGILICEDIWKNSNICKHLK 164 E+R F+ GY + F + + +CED+W Sbjct: 126 ERRWFVPAPDGSCGFVRGYGEGEVPFGRMLFQCEELGEFCFAVELCEDLWAPVAPSAAYA 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K R +VTGQ + +Y N G+ +L+F G S Sbjct: 186 AAGATVIANLSASVETVGKDDYRRALVTGQSGRLVCGYLYANAGEGESTTDLVFSGHSMI 245 Query: 223 FDGQ--------------------QQLAFQMKHFS------EQNFMTEWHYDQQLSQWNY 256 + Q+LAF+ + + Q+F+T + L++ Sbjct: 246 AENGSMLAQTGRFEQTMAVSEIDVQRLAFERRRLTTFPAGDAQSFLT-IPFSMPLTETKL 304 Query: 257 MSDDSASTMYIPLQEEEADYNACVL-----SLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 A P A +L L+ + ++G+SGG+DSAL + Sbjct: 305 TRPVPALPFVPPKGPGRDQCCAGILQVQAHGLKKRIDHTGAKTAVVGISGGLDSALALLV 364 Query: 312 AVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 V A+ + +V + +P T+ ++ +A + LG + + I V F+ + Sbjct: 365 CVRAMELLGRPRTDVHAVTMPCFGTTARTRGNAQIICERLGVTFSCVDITASVRRHFADI 424 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 E + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 425 GH--DEAVRDVTFENAQARERTQVLMDIANETGGLVVGTGDLSELALGWATYNGDQMSMY 482 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L ++ L IL+ S EL P Q + Sbjct: 483 GVNASVPKTLVRHLVAYEAERACDDAL----RAALCDILDTPVSPELLPPDDGAIAQKTE 538 Query: 481 ESLPPYPILDDIIKRIVENEES--------FINNDQEYNDETVRYVEHLLY----GSEYK 528 + + PY + D + ++ S Q Y ET+ Y Y ++K Sbjct: 539 DLVGPYELHDFFLYHVLRWGFSPHKTLRLALYAFGQAYPRETILYWMRTFYRRFFAQQFK 598 Query: 529 RRQAPVGTKITAKSF 543 R P G KI + S Sbjct: 599 RSCMPDGPKIGSVSL 613 >gi|238927338|ref|ZP_04659098.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Selenomonas flueggei ATCC 43531] gi|238884620|gb|EEQ48258.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Selenomonas flueggei ATCC 43531] Length = 555 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 143/516 (27%), Positives = 220/516 (42%), Gaps = 73/516 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ + V G N A R EA G DL LF L +SG + +F+ Sbjct: 1 MKIALISMEVVPGRPDRNAATMRGKIAEAKAAGADLALFPALSLSGLFLGGGWKQPAFLG 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C++ + + + GI V F GN+ A + + H Sbjct: 61 DCATYAEEIAAAAD----GITVMF-----------------GNVAAGGEGCCGLARTLLH 99 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 + + + P+ R L+ E G + + +ASP+ Sbjct: 100 ARGGVLREVARRPLHGASTRFSPLLYE-------------LPGERVILAADASPF-PLCF 145 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + R T Q + L +YVN +G QD+ + F G Q AF+ + +T Sbjct: 146 EARTLAKTAQEQNAVL--LYVNALGIQDK---GKTVYTFAGSAQ-AFRAD--GARALITP 197 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN----NFHKVIIGLS 300 + D D+A+ P + E +LR VQK + +V+IG+S Sbjct: 198 AYKD------GITIVDTAALPAPPNKPAEPAIAPIYRTLRYAVQKFLARIHMERVVIGIS 251 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ AA+ VDA+G ENV + +P ++ S + AA A LG ++ ++PI + V+ Sbjct: 252 GGIDSAVAAALYVDAIGAENVLLVNMPSRFNSATTKGLAAQLADNLGSRHMIVPIEESVS 311 Query: 361 HFFSLMSQFLQEEP----------SGIVAENIQSRIR-GNILMALSNHSKAMLLTTSNKS 409 + +S+ E S V EN+Q+R R G +L ++ A NK+ Sbjct: 312 YTAKQLSEIPIEGAAAAPGEHLTISSFVRENMQARNRSGRVLATIAAAWGAGFTCNGNKA 371 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E +VGY TLYGD++G L DL+K QV+ LA + N H E IP I++ P Sbjct: 372 ETTVGYATLYGDLAGFLCALADLWKYQVYDLARYLNEHVYGR------EAIPQGIIDIVP 425 Query: 470 SAELRPHQ-TDQESLPP--YPILDDIIKRIVENEES 502 SAEL Q D+ P YP D + + EN E+ Sbjct: 426 SAELSDAQNVDEGKGDPIRYPYHDHLFRAFAENNET 461 >gi|193212251|ref|YP_001998204.1| NAD synthetase [Chlorobaculum parvum NCIB 8327] gi|238692622|sp|B3QM51|NADE_CHLP8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|193085728|gb|ACF11004.1| NAD+ synthetase [Chlorobaculum parvum NCIB 8327] Length = 277 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/272 (31%), Positives = 147/272 (54%), Gaps = 28/272 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ ++K F V++GLSGGIDSA+ +A +LG +NV +++PYK +S +SLE A Sbjct: 21 IRNEIRKFGFRSVVLGLSGGIDSAVVCELAARSLGADNVLALLMPYKTSSRESLEHAQLM 80 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 LG + + +P+ +V+ FF + + S + N+ +R R L +S ++ Sbjct: 81 VDRLGIRAETMPVTGVVDAFFE-----TRPDASRLRRGNVMARSRMLCLYDVSARDGCLV 135 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGT++GDM+ NP+ DLYKTQ++ G+ LG +P Sbjct: 136 LGTSNKTELMLGYGTMFGDMASAVNPIGDLYKTQLW---------GLARHLG-----VPS 181 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETV----RY 517 +++K PSA+L Q+D+ L Y +D ++ ++E + D + Sbjct: 182 ELIDKQPSADLWEGQSDEADLGFSYEEVDQLLYMMLEER---MERDAILAEGIAPAFYDR 238 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 V ++ ++YK R PV K+++++ G D Y Sbjct: 239 VRQMVVRNQYK-RMMPVIAKLSSRTPGIDFRY 269 >gi|223935828|ref|ZP_03627743.1| NAD+ synthetase [bacterium Ellin514] gi|223895429|gb|EEF61875.1| NAD+ synthetase [bacterium Ellin514] Length = 671 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 147/589 (24%), Positives = 245/589 (41%), Gaps = 94/589 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +K+A A LN D N A + A Q + ++ EL ++GY ED + Sbjct: 1 MKLIKVAAAVLNQTPLDWPHNKQNILAAIDTARAQHVSVLCLPELCVTGYGCEDAFQSAN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + T G + +G P Q + N ++ G I+ K L Sbjct: 61 TQRMAWRMLQEILVSTR--GMIVSLGLPIFHQNNLFNCACLISNGKILGFVAKKFLAGDG 118 Query: 122 EFHEKRTFI---SGYSND---------PI--VFRD---IRLGILICEDIWKNSNICKHLK 164 +E R F SG N PI ++ D +++G ICED W + L Sbjct: 119 IHYEPRWFKPWPSGVRNTLTTETGETFPIGDLYFDCGGLKIGFEICEDAWAANRPGAALA 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCF 223 G + + + +AS + K++ R V + IY N +G + I+DG + Sbjct: 179 LHGVDMILNPSASHFAFGKIEIRKRFVLEGSRAFGVTYIYANLLGNEAGRAIYDGGALIA 238 Query: 224 DGQQQLAFQMKHFSEQNF-MTEWHYDQQLSQWNYMSDDS--------------ASTMYIP 268 + LA + FS +F +T D +++ S A +Y P Sbjct: 239 SAGKLLA-EGNRFSFADFQITTALIDVDITRMAQARLASLKPQLEEAERGSIRAPFVYPP 297 Query: 269 LQEEEADYN-----------------ACVLSLRDYVQKNNFHKVIIGLSGGIDSA----L 307 L + + N A L+L DY++K+ ++ LSGG+DSA L Sbjct: 298 LDPQPTEINLATWENSLQLKAEEFTRAEALALFDYLRKSRSQGFVVSLSGGVDSATVSCL 357 Query: 308 CAAIAVDALGKENVQTIMLPYKYT-------SPQSL--------------------EDAA 340 A + +G+ ++T + Y +P+ L E A Sbjct: 358 VAIMVHLGIGELGLETFVRKLDYIPNIADRRTPRELIKRLLTCVYQSTANSSETTREAAK 417 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE----PSGIVAENIQSRIRGNILMALSN 396 AKALG ++ + L + ++ S+ L E I +N+Q+R+R + L N Sbjct: 418 KVAKALGAQFLEFDVEHLREAYVAIASKALGRELNWAEDDIALQNVQARVRSPGVWLLVN 477 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 A+LL+TSN+SE +VGY T+ GD SGG +P+ + K + W G G G + Sbjct: 478 VQNALLLSTSNRSEAAVGYATMDGDTSGGLSPIAGIDKAFLQGWLRWLEREGPI-GFGAI 536 Query: 457 TEVIPPSILEKSPSAELRPH---QTDQESLPPYPILDDIIKRIVENEES 502 + ++ ++P+AELRP QTD+ L PYP+LD I + + +++S Sbjct: 537 PAL--AAVNCQTPTAELRPQESSQTDEADLMPYPVLDAIERAGIRDKQS 583 >gi|226323895|ref|ZP_03799413.1| hypothetical protein COPCOM_01670 [Coprococcus comes ATCC 27758] gi|225207444|gb|EEG89798.1| hypothetical protein COPCOM_01670 [Coprococcus comes ATCC 27758] Length = 638 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 142/610 (23%), Positives = 254/610 (41%), Gaps = 84/610 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A ++ V D+ N + + +EA + G +I+F EL ++GY DL + ++ Sbjct: 6 IKVAAVTVDIRVADVWHNCKEICKRMKEAEKAGAKIIVFPELCLTGYTCSDLFTQDILLK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + +T A + VG P + N L+ G I+ K LPNY EF+ Sbjct: 66 EVRRALAKVAEETRHTEALVFVGLPLAIDGELYNVAAALNDGKILGFTTKTFLPNYGEFY 125 Query: 125 EKRTFISG--------YSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F G Y + I+F D+ + ICED+W + Sbjct: 126 EMRQFRQGPKKARVISYEGEEILFGPQILYQAAEMDDLVVSAEICEDVWSPIPPSIEAAR 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA L + +AS K R E++ GQ + + +Y N G+ +++F G + Sbjct: 186 EGAIILVNCSASDETIGKDSYREELIKGQSARLIAGYVYANAGDGESTTDVVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW-------------------------NYMS 258 + L + K F+ + ++E + LS+ ++ Sbjct: 246 ENGTILK-EAKRFANEMIVSEIDIFRLLSERRKNTTFQTTEERYLPKVLFHISVEETALT 304 Query: 259 DDSASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 A T ++P E + C + L+ + + ++G+SGG+DS L + Sbjct: 305 RSFAQTPFVPQNMAERE-RRCEEILMIQAMGLKKRLVHTHSRTAVVGISGGLDSTLALLV 363 Query: 312 ---AVDALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A D GK+ ++ + +P T+ ++ ++A +K LG +PI D V+ F + Sbjct: 364 TSKAFDMAGKDRKDIIAVTMPCFGTTDRTYQNACLMSKKLGATLKEVPIADAVHVHFRDI 423 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 EE + EN Q+R R +LM ++N M++ T + SE+++G+ T GD + Sbjct: 424 GH--DEEVHDVTYENSQARERTQVLMDIANQEWGMVIGTGDMSELALGWATYNGDHMSMY 481 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L + + T L EV+ +L+ S EL P Q + Sbjct: 482 GVNASVPKTLVRHLVQY---YADTCEDQELKEVL-LDVLDTPVSPELLPPKDGEIAQKTE 537 Query: 481 ESLPPYPILDDIIKRIVE--NEESFINN------DQEYNDETV----RYVEHLLYGSEYK 528 + + PY + D + ++ E S I + Y+ ET+ + + ++K Sbjct: 538 DLVGPYELHDFYLYYVLRFGFEPSKIYRLAKFAFEGTYDSETIMKWLKTFYRRFFAQQFK 597 Query: 529 RRQAPVGTKI 538 R P G KI Sbjct: 598 RSCLPDGPKI 607 >gi|238923736|ref|YP_002937252.1| NAD synthetase [Eubacterium rectale ATCC 33656] gi|238875411|gb|ACR75118.1| NAD synthetase [Eubacterium rectale ATCC 33656] Length = 635 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 137/611 (22%), Positives = 259/611 (42%), Gaps = 87/611 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + +E G +++F EL I+GY +DL ++ I Sbjct: 6 IKVAAATPKVKVADTVYNGQLIKALMKECTDNGAKVVVFPELCITGYTCQDLFWQDKLIA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + + +G P + + N ++ G ++A+ K LPNY+EF+ Sbjct: 66 AAEDELIGIADYSRSLDGIFFIGLPYEINGMLYNMAAVVSRGEVLAMVPKTFLPNYNEFY 125 Query: 125 EKRTFISGYSNDPIV--------------------FRDIRLGILICEDIWKNSNICKHLK 164 E R F SG + V +++ + +CED+W + Sbjct: 126 EARHFASGENLSTYVTLKNGQQVSVDTDFIFSCKQLPKLKIAVELCEDLWTPNPPSIRHA 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K R E+V+GQ + + IY + G+ ++++ G + Sbjct: 186 MSGATVIVNLSASDEVTGKAIYRRELVSGQSARLICGYIYASAGDGESTQDVVYSGHNLI 245 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHY-----------------DQQLSQWNYMSDDSASTM 265 + LA + F+ + +E+ D + ++++ D+ + Sbjct: 246 CENGNVLA-ESGRFTNETIYSEFDVERIETERRRMTTFVVEDDHRWAEFDLEVKDTTLSR 304 Query: 266 Y------IPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 Y +P + + D C + L+ ++ N +IG+SGG+DS L + Sbjct: 305 YVNPAPFVPADKTDRD-RRCDEILMIQAMGLKKRLEHTNCKTAVIGISGGLDSTLALLVT 363 Query: 313 V---DALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V D LGK+ ++ + +P T+ ++ ++A K LG + + I D VN F + Sbjct: 364 VRAFDLLGKDHKDIAAVTMPGFGTTDRTYDNAVNLIKCLGATFIEVDIKDAVNIHFRDIG 423 Query: 368 QFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 Q +PS + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 424 Q----DPSVHDVTYENGQARERTQILMDIANKENGMVIGTGDLSELALGWATYNGDHMSM 479 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + + T G L E +L+ S EL P Q Sbjct: 480 YAVNASVPKTLVRHLVKY---YADTCG-SDLLESTLLDVLDTPVSPELLPPENGKISQKT 535 Query: 480 QESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETV-RYVEHL---LYGSEY 527 ++ + PY + D + ++ + I + +Y+DE + +++++ + ++ Sbjct: 536 EDLVGPYELHDFFLYNMLRCGYAPAKVYRLARIAFEGKYDDEFILKWLKNFYRRFFAQQF 595 Query: 528 KRRQAPVGTKI 538 KR P G K+ Sbjct: 596 KRSCLPDGPKV 606 >gi|116327703|ref|YP_797423.1| NAD(+) synthase (glutamine-hydrolyzing) [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120447|gb|ABJ78490.1| NAD(+) synthase (glutamine-hydrolyzing) [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 644 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 168/629 (26%), Positives = 262/629 (41%), Gaps = 111/629 (17%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +++ L V D GN+ K +R E+ + DLILF EL ISGY ED F Sbjct: 1 MQPVRLTSVSLKTRVFDFTGNLNKIKRVLEQ--EKNSDLILFPELCISGYGCEDSFFFPR 58 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + +++ L T + +VVG P + N +L G + + K NL + Sbjct: 59 IWKKSWNSLTELLPLTKN--KIVVVGLPIFQNPYLFNCAAVLCNGVVAGIVPKSNLASTG 116 Query: 122 EFHEKRTFISGYSN--------------DPIVFRDIRL--GILICEDIWKNSNICKHLKK 165 +E R F G ++F R G+ ICED W L + Sbjct: 117 VHYENRWFTRGEETRKNFAAPDGSVIPFGSLIFETDRFSFGVEICEDSWVLQKPSIPLAE 176 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIV---TGQISHVHLPIIYVNQVGGQD-ELIFDGAS- 220 G + + S AS + K + R I + + S+V+L + N G + LIF+G S Sbjct: 177 AGTDLILSPGASHFAFGKQRIRRRIFQENSRRESNVYL---FSNLCGNESGRLIFEGGSM 233 Query: 221 --------------------FC---FDGQQQLAFQMKHF--SEQNFMTEWHYDQQLSQWN 255 FC D + A + K+F S F + +++ Sbjct: 234 IVQNGKLISESQRLFFGDFNFCSSEIDFETSRADRAKNFRPSRNRFNPKKSFEENRIHLG 293 Query: 256 YMSDDSASTMYIPL------QEEEA--DYN-ACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 S + PL QEEE+ D+ A L L DY+ + + LSGG DS+ Sbjct: 294 LKFPKRTSKINHPLPEPSVSQEEESYLDFTRAVALGLFDYLINSKTKGYTLSLSGGADSS 353 Query: 307 LCA-------AIAVDALGKE--NVQTI----MLPYKYTSPQSLEDAA-ACAKALGCKYDV 352 +CA IA LG++ N Q I +L Y + + D + AKAL DV Sbjct: 354 VCALLVTAMKKIAKQELGEDFFNSQGIEEDFILSTLYQATVNNSDRTRSLAKALA--EDV 411 Query: 353 LPIHD--LVNHFFSLMSQFLQE--------EPSGIVAENIQSRIRGNILMALSNHSKAML 402 +H ++ +SQ + E +V +NIQ+RIR I+ L+N + +L Sbjct: 412 KSVHGELTIDTEVQNISQKISEITGISFNWNEHNLVLQNIQARIRSPIIWMLANLNGHLL 471 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L+T N+SE SVGY T+ GD SG PL + K + + + + G + P Sbjct: 472 LSTGNRSEASVGYTTMDGDSSGSVAPLAGVSKEFILKWMRF-----VAEGRDSILPAYPS 526 Query: 463 --SILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIVENEESF------INNDQEYN 511 I+ PSAEL+P Q D++ L PYP+L I + + F ++ D E Sbjct: 527 VKEIVLSPPSAELKPLEDEQEDEKDLMPYPLLQKIEELFIVRGAGFSEIVQLLSKDSEIQ 586 Query: 512 -------DETVRYVEHLLYGSEYKRRQAP 533 +E+VR L + +++KR + P Sbjct: 587 KSVSGGLEESVRKYIALFHRNQWKRERLP 615 >gi|238917216|ref|YP_002930733.1| NAD+ synthase [Eubacterium eligens ATCC 27750] gi|238872576|gb|ACR72286.1| NAD+ synthase [Eubacterium eligens ATCC 27750] Length = 659 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 147/621 (23%), Positives = 266/621 (42%), Gaps = 95/621 (15%) Query: 2 LKKLKIAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 LK I A + P V D NI + EA ++ + +F E+ I+GY DL Sbjct: 14 LKDGYIRAAAMTPKIKVADCEYNIENIKALMIEAYKKDTAIAVFPEMCITGYTCNDLFLH 73 Query: 60 KSFIQACSSAIDTLKSDTH--DGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 + SA++ L S H + G++ VG P + + N V + G I+ + K+ Sbjct: 74 DRLLD---SALEGLVSIKHFSENVKGMISFVGLPYEMNGKLYNVVAGVMNGQILGMVPKM 130 Query: 116 NLPNYSEFHEKRTFISGYS--------------NDPIVF-----RDIRLGILICEDIWKN 156 LPNY EF+E+R F G++ ++F R +++G+ ICED+W Sbjct: 131 YLPNYGEFYERRQFTPGFNECVYVNVDGEEVPFGSELLFTFDNNRKVKIGVEICEDLWTP 190 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--EL 214 GA + + +AS K R ++V+GQ + + +Y + GG+ ++ Sbjct: 191 QPPSIKHAMNGATIIVNASASNETIGKDTYRKQLVSGQSARLVCGYVYSSAGGGESTQDI 250 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS-----DDSASTM---- 265 +F + + LA + F++++ + ++ S+ M+ ++SA T Sbjct: 251 VFSAHNLICENGSTLA-EAHKFADESVYADIDVERICSERRRMTTYAVDENSAYTEVQAH 309 Query: 266 -----------------YIPLQEEEADYNAC--VLSLRDY-----VQKNNFHKVIIGLSG 301 ++P ++E D + C +L+++ Y ++ N +IG+SG Sbjct: 310 GLINKELKLIRYFDKAPFVPSDKKERD-SRCEEILNIQSYGLKKRLEHTNCKNAVIGISG 368 Query: 302 GIDSALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L + V A + + I +P T+ ++ +A K LGC + I Sbjct: 369 GLDSTLALLVTVRAFDMCGFDRSGIHCITMPCFGTTDRTYNNAVKLTKQLGCSLREINIM 428 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 V F + E + EN Q+R R ILM ++N + M++ T + SE+++G+ Sbjct: 429 KAVRQHFEDIGH--DENNHNVTYENGQARERTQILMDIANQTNGMVIGTGDMSELALGWA 486 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T GD + + KT V L + + T G L+ V+ +L+ S EL P Sbjct: 487 TYNGDHMSMYGVNASVPKTLVRHLVQF---YADTCGNEELSSVL-NDVLDTPVSPELLPP 542 Query: 477 QTD-------QESLPPYPILD----DIIKRIVENEESF----INNDQEYNDETV----RY 517 + D ++ + PY + D +++ E E+ F EY+D+T+ R Sbjct: 543 KEDGTIAQKTEDLVGPYELHDFFMYHMLRFGAEPEKIFRIAKYAFAGEYDDKTIYKWLRT 602 Query: 518 VEHLLYGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 603 FTWRFFAQQFKRSCLPDGPKV 623 >gi|224541818|ref|ZP_03682357.1| hypothetical protein CATMIT_00990 [Catenibacterium mitsuokai DSM 15897] gi|224525241|gb|EEF94346.1| hypothetical protein CATMIT_00990 [Catenibacterium mitsuokai DSM 15897] Length = 634 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 125/547 (22%), Positives = 228/547 (41%), Gaps = 68/547 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + ++ N + R +EAN +++ EL ++GY EDL F+K + Sbjct: 8 IRVAAGSFKVSIANVKKNAQEIIRLSKEANANHTQVLVLNELCLTGYTIEDLFFQKRVLN 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + +T D IV+G P + + N ++L G+I+ K +PNY EF+ Sbjct: 68 ESETQLQYILDETKDLDTVIVIGMPLVIRNDLYNCALVLHRGDILGAVPKTYIPNYHEFY 127 Query: 125 EKRTFISGYSNDPIV--------------FRDI-----RLGILICEDIWKNSNICKHLKK 165 E R F SG D + F D+ ++G+ ICED+W Sbjct: 128 EGRHFKSGRDLDEYITLCDQEIHVTTEQLFEDVNHPWLKIGVEICEDVWAPHTPSTDACL 187 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---------ELIF 216 GA + + +AS K R +++ + + +Y N G+ LI+ Sbjct: 188 NGATLIVNPSASNNLTGKSDYRRSLISATSARLVCGYVYSNTGVGESTTDVVFSNHHLIY 247 Query: 217 DGASFCFDGQQ--------QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM--- 265 + + + Q + + H +E+ MT + + +M DD + Sbjct: 248 ENGTLLKESTQYSTGLIYADMDLEKIH-TERIEMTTYESEDYFDAVPFMLDDEELDLDRY 306 Query: 266 -----YIPLQEE------EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI--- 311 ++P +E E +N L ++ + KV++G+SGG+DS L + Sbjct: 307 YDPHPFVPSDKEKRAARCEEVFNIQTHGLMQRLEAAHIKKVVVGMSGGLDSTLALLVMHK 366 Query: 312 AVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A LG+ ++ + +P T+ ++L +A K L + I D VN F ++ Sbjct: 367 AYKMLGRPVSDIIAVTMPCFGTTDRTLNNALTLMKELEVTSMTVNIKDAVNQHFKDINH- 425 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 E + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 426 -NPEVHDVTYENCQARERTQVLMDIANQAGGIVVGTGDLSEVALGWSTYNGDHMSMYGVN 484 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESL 483 + KT V L + + T G + E IL S EL P Q ++ + Sbjct: 485 VSVPKTLVRYLVDYVS----TLYKGEVLEATLQDILHTPVSPELLPAKDGEITQKTEDIV 540 Query: 484 PPYPILD 490 PY + D Sbjct: 541 GPYELHD 547 >gi|168210750|ref|ZP_02636375.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens B str. ATCC 3626] gi|170711208|gb|EDT23390.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens B str. ATCC 3626] Length = 635 Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 142/625 (22%), Positives = 267/625 (42%), Gaps = 98/625 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ A + D N+ + A + + +++F EL IS Y DL + I+ Sbjct: 4 IKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNEKLIE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C+ AI L + + VG P + + N ++ G ++ + K +PNYSEF+ Sbjct: 64 NCNLAIKNLVEFSKGKDILMAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGYS-----------------NDPIV-FRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G++ D I F+++++G ICED+W +L Sbjct: 124 EKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNLALM 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDGAS--- 220 GA + +L+AS +K R +V Q + IY + G + +L+F G Sbjct: 184 GANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIY-SSAGVHESTTDLLFSGHMIIA 242 Query: 221 -------------------------FCFDGQ--QQLAFQMKHFSEQN------FMTE--- 244 F D + + ++F+ F+E N F E Sbjct: 243 ENGTIIKENNRFKRENDLLTGIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLENTE 302 Query: 245 -WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++D+++ + ++ + Y E N +L ++ N K +IG+SGG+ Sbjct: 303 IKNFDREIDKHPFL----PKSQYAMEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGL 358 Query: 304 DSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + V + +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 359 DSTLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNA 418 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T Sbjct: 419 ALQHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTY 476 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEVIPPSILEKSPSAEL 473 GD ++ + KT V L ++ +H I++ L L + P +L K ++ Sbjct: 477 NGDHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEALLDILDTPVSPELLPKDKEGKI 536 Query: 474 RPHQTDQESLPPYPILDDIIKRIVEN-----------EESFINNDQEYNDETV-RYVEHL 521 Q ++ + PY + D + +++ +E+F N +YN+ET+ ++++ Sbjct: 537 A--QKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKN---DYNEETLKKWLDKF 591 Query: 522 L---YGSEYKRRQAPVGTKITAKSF 543 + + ++KR P G K+ + S Sbjct: 592 IRRFFTQQFKRSALPDGPKVGSISL 616 >gi|110801895|ref|YP_698452.1| NAD synthetase [Clostridium perfringens SM101] gi|110682396|gb|ABG85766.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens SM101] Length = 635 Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 141/624 (22%), Positives = 266/624 (42%), Gaps = 96/624 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ A + D N+ + A + + +++F EL IS Y DL + I+ Sbjct: 4 IKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNEKLIE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C+ AI L + I VG P + + N I+ G ++ + K +PNYSEF+ Sbjct: 64 NCNLAIKNLVEFSKGKDILIAVGAPFLYRYSLYNCAYIILNGELLGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGYS-----------------NDPIV-FRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G++ D I F+++++G ICED+W +L Sbjct: 124 EKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNLALM 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV--------------------- 205 GA + +L+AS +K R +V Q + IY Sbjct: 184 GANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIYSSAGVHESTTDLLFSGHMIIAE 243 Query: 206 --------NQVGGQDEL---IFDGASFCFDGQQQLAFQMKHFSEQN------FMTE---- 244 N+ +++L I D + + ++F+ F+E N F E Sbjct: 244 NGTIIKENNRFKRENDLLTGIVDLFKLNAERIKNISFRNSTFNENNDPKFIPFNLENTEI 303 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 ++D+++ + ++ + Y + E N +L ++ N K +IG+SGG+D Sbjct: 304 KNFDREIDKHPFL----PKSQYAMEERCEEILNIQAAALAKRLEHTNLKKAVIGISGGLD 359 Query: 305 SALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S L + V + +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 360 STLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELNCDFREINIVNAA 419 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T Sbjct: 420 LQHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTYN 477 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEVIPPSILEKSPSAELR 474 GD ++ + KT V L ++ +H I++ L L + P +L K ++ Sbjct: 478 GDHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEALLDILDTPVSPELLPKDKEGKIA 537 Query: 475 PHQTDQESLPPYPILDDIIKRIVEN-----------EESFINNDQEYNDETV-RYVEHLL 522 Q ++ + PY + D + +++ +E+F N +Y++ET+ ++++ + Sbjct: 538 --QKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKN---DYDEETLKKWLDKFI 592 Query: 523 ---YGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ + S Sbjct: 593 RRFFTQQFKRSALPDGPKVGSISL 616 >gi|253580238|ref|ZP_04857504.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848331|gb|EES76295.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 638 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 136/552 (24%), Positives = 237/552 (42%), Gaps = 76/552 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A A V D N ++ R E ++ + ++ F EL I+GY +DL ++ + Sbjct: 6 IKTAAATPYITVADCNANGSEIIRLIHEMEKEHVKVMTFPELCITGYTCQDLFLQRRLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + +T D A + VG P ++ + N +L+ G II + K LPNY EF+ Sbjct: 66 SAWETLLKITKETADVDALVFVGVPFRNHGKLYNVAAVLNRGEIIGLVPKTYLPNYGEFY 125 Query: 125 EKRTFISG---------------YSNDPIVF-----RDIRLGILICEDIWKNSNICKHLK 164 E+R F SG + D I+F ++ ICED+W Sbjct: 126 EQRHFASGLGCLEYVDIEGKRVPFGTD-ILFICEEEPELVAAAEICEDLWVTLPPSVLHA 184 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 + GA + +L+AS K R ++V+GQ + + +Y N G+ +L+F G + Sbjct: 185 QAGANLIVNLSASNEMVGKDSYRRDLVSGQSARLVCGYVYANAGEGESTQDLVFGGQNMI 244 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHY----DQQLSQWNYMSDDSASTM------------- 265 + LA + K F +E D++ Y D + + Sbjct: 245 AENGVILA-EGKRFHNGIVCSEIDVQRLNDERRRLTTYQPADDSDHIKVCFHLNVEETKL 303 Query: 266 --------YIPLQEEEADY------NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 ++P ++EE D N + L+ + + HK +GLSGG+DS L + Sbjct: 304 TRKYSQYPFVPSRKEERDMRCDEILNIQAMGLKKRMDHIHCHKATVGLSGGLDSTLALLV 363 Query: 312 AVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A ++++ I +P T+ ++ ++A ++ LG + I + VN F + Sbjct: 364 IARAFDLSDADRKDIHCITMPCFGTTDRTYQNACKLSQCLGATLSEINIKEAVNVHFRDI 423 Query: 367 SQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + +PS + EN Q+R R ILM +N ++L+ T + SE+++G+ T GD Sbjct: 424 AH----DPSVHDVTYENSQARERTQILMDSANQDGSILVGTGDLSELALGWATYNGDHMS 479 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQT 478 + + KT V L + + T LTEV+ IL+ S EL P Q Sbjct: 480 MYGVNASVPKTLVRHLVRY---YADTCKDEKLTEVL-LDILDTPVSPELLPPKDGKIAQK 535 Query: 479 DQESLPPYPILD 490 ++ + PY + D Sbjct: 536 TEDLVGPYELHD 547 >gi|253681569|ref|ZP_04862366.1| NAD(+) synthase (glutamine-hydrolyzing) [Clostridium botulinum D str. 1873] gi|253561281|gb|EES90733.1| NAD(+) synthase (glutamine-hydrolyzing) [Clostridium botulinum D str. 1873] Length = 638 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 148/621 (23%), Positives = 258/621 (41%), Gaps = 92/621 (14%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I +A PVV GDI NI ++ + ++ LI+ EL I+GY DL ++ I+ Sbjct: 4 IKVASACPVVNVGDIKFNIENIKKCINLSIKENSKLIVLPELSITGYTCADLFLNQTLIE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + + + I VG P + N I+ G I+ + K LPNYSEF+ Sbjct: 64 ESIEGIKDICNFSLNKDILISVGAPILYNYCLYNCAYIIYNGKILGIVPKSYLPNYSEFY 123 Query: 125 EKRTFISGYS-----NDPIVFRDI-------------RLGILICEDIWKNSNICKHLKKQ 166 EKR F GY+ D +DI + G ICED+W +L Sbjct: 124 EKRWFTEGYNIIDKKVDLYFQKDIPFGVNLIFSSGNFKFGFEICEDLWTVIPPSSYLVLM 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R IV+ Q + +Y + +++F G + Sbjct: 184 GANIIGNLSASNELVSKADYRTSIVSSQSARCMCSYVYASSGVFESTTDVVFSGHLIISE 243 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQW---NYMSDDSASTM---------------- 265 + L + E +T +L+ N DS T Sbjct: 244 NGKILCENNRFQRENEVITSIIDIDKLNNMRIKNLSFRDSKGTCPFTPFEIDFKFKNTSI 303 Query: 266 -----------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E E + +N L + KVI+G+SGG+DS L Sbjct: 304 DVFDRPIHKHPFVPASEHEREIRSKEIFNIQSAGLAKRLSHTKLEKVIVGISGGLDSTLA 363 Query: 309 AAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY-DVLPIHDLVNHF 362 +AV+ + ++N+ TI +P T+ ++ +A K LG + ++ ++ + HF Sbjct: 364 LLVAVNTFDLLKIPRKNIITITMPGFGTTDRTYNNAVELCKKLGTDFREINIVNSCLQHF 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + E + EN+Q+R R ILM L+N A+L+ T + SEI++G+ T GD Sbjct: 424 KDIGHP---AEIHDVTYENVQARERTQILMDLANKEGALLIGTGDLSEIALGWATYNGDH 480 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSAELRPHQ 477 ++ + KT V L + H + L + P +L K + ++ Q Sbjct: 481 MSMYSVNCSIPKTLVRYLVQFVAEHESEDNISEILIDILNTPVSPELLPKDKNGKIT--Q 538 Query: 478 TDQESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETV-RYVEHLL--- 522 ++ + PY + D + K ++ +E+F N +Y++ T+ ++++ + Sbjct: 539 KTEDIVGPYELHDFFLYYFIGQNATPEKILLLAKEAFKN---DYDENTIKKWLDKFIRRF 595 Query: 523 YGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ S Sbjct: 596 FTQQFKRSAMPDGPKVGTISL 616 >gi|194333535|ref|YP_002015395.1| NAD synthetase [Prosthecochloris aestuarii DSM 271] gi|194311353|gb|ACF45748.1| NAD+ synthetase [Prosthecochloris aestuarii DSM 271] Length = 278 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/274 (33%), Positives = 146/274 (53%), Gaps = 26/274 (9%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V L++ ++K F ++GLSGGIDSA+ +A ALG ENV +M+PY+ +S S++ A Sbjct: 19 VTFLQNEIRKFGFTSAVLGLSGGIDSAVVCELASRALGPENVLAVMMPYRSSSQASIDHA 78 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 G +V I +V+ FFS ++E S + NI +R R L +S Sbjct: 79 RLMVDKTGVNAEVADISAVVDAFFS-----GRQEASRLRKGNIMARSRMLFLYDISARDG 133 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++ TSNK+E+ +GYGTL+GDM+ NP+ DLYKTQ++ LA + Sbjct: 134 RLVIGTSNKTELLLGYGTLFGDMASAINPVGDLYKTQLWGLARHLD-------------- 179 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETV 515 IP ++ K PSA+L Q D+E L Y +DD++ ++E + + I ++ Sbjct: 180 IPDELVSKPPSADLWEGQCDEEDLGFSYQEVDDLLYMMLEKRLDRATIIG--LGWDSSLY 237 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 V ++ ++YK R PV KI++++ G D Y Sbjct: 238 DRVRTMVIRNQYK-RMMPVIAKISSRTPGIDFRY 270 >gi|300311219|ref|YP_003775311.1| glutamine-dependent NAD synthetase [Herbaspirillum seropedicae SmR1] gi|300074004|gb|ADJ63403.1| glutamine-dependent NAD synthetase protein [Herbaspirillum seropedicae SmR1] Length = 685 Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 143/563 (25%), Positives = 232/563 (41%), Gaps = 81/563 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A + V D N + E+A +G L+ F EL +S Y EDL +++ + A Sbjct: 15 RVAVAVPDCKVADPGFNAQRTIALAEQAAARGAVLVSFPELGLSAYSCEDLFQQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ ++ + A ++VG P + + N V+L G I+ V K LPNYSEF+E Sbjct: 75 SLQALQSVLEASMRIPAALIVGLPLKVDHQLYNCAVVLHHGRILGVVPKSYLPNYSEFYE 134 Query: 126 KRTFIS----------------GYSNDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 R F S G+ + ++F D R I ICED+W Sbjct: 135 ARQFSSADCAVTRSVHLLGQEVGFGSH-LLFEIRNIPDFRFHIEICEDVWVPIPPSSFAA 193 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K RH++V+ Q + +Y + G+ +L +DG + Sbjct: 194 LAGATVLVNLSASNIVVGKSGYRHQLVSQQSARCLAAYLYSSAGNGESTTDLAWDGQALI 253 Query: 223 FDGQQQLA---------------FQMKHFSEQNF-------MTEWHYDQ----------- 249 + + LA ++ S + F H D+ Sbjct: 254 CENGELLAESERFAQGGHVIYADVDLERLSRERFHQTTFGQSVRRHADEVRRFEVVGFEV 313 Query: 250 QLSQWNY--MSDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSG 301 Q+ Q + A Y+P E+ + Y+ V +L + KV+IG+SG Sbjct: 314 QIPQQQALPLQRRVARFPYVPANAEQRELRCREVYSIQVQALVQRLSSAGLKKVVIGVSG 373 Query: 302 GIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L A A+D LG + N+ +P TS ++L A +GC + I Sbjct: 374 GLDSTHALLVCAKAMDKLGLPRSNILAYTMPGFATSSRTLVQAHQLMAQVGCSAQEIDIR 433 Query: 357 DLVNHFFS-LMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 L + + EP I EN+Q+ R N L L+NH A+++ T + SE+++G Sbjct: 434 PSCEQMLKDLGHPYSRGEPVYDITFENVQAGERTNHLFRLANHHGAIVIGTGDLSELALG 493 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP------LTEVIPPSILEK 467 + T GD +N + KT + + W G P L I P ++ Sbjct: 494 WCTYGVGDHMSHYNVNASVPKTLITHMVRWVAESGSLELKQPEVLIHVLETEISPELVPG 553 Query: 468 SPSAELRPHQTDQESLPPYPILD 490 + E P Q Q+ + PY + D Sbjct: 554 ASDGE--PGQRTQDFIGPYELQD 574 >gi|261403192|ref|YP_003247416.1| NAD+ synthetase [Methanocaldococcus vulcanius M7] gi|261370185|gb|ACX72934.1| NAD+ synthetase [Methanocaldococcus vulcanius M7] Length = 251 Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 93/257 (36%), Positives = 140/257 (54%), Gaps = 25/257 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD V++ + V+IGLSGGIDS+L A + V ALGK+ V I++P KY++ + +E A Sbjct: 12 IRDKVEEARVNGVVIGLSGGIDSSLTAYLCVKALGKDRVLGIIMPEKYSNRKDIEHAIMV 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK+LG KY + I D++ F + E I N+++RIR IL +N ++ Sbjct: 72 AKSLGIKYIISDITDILKAFGA-GGYVPTREFDKIADGNLKARIRMCILYYFANKYNLLV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 T+NKSE VGYGT +GD++ P+ +L+KT+V ++A + LG IP Sbjct: 131 AGTANKSETYVGYGTKHGDIACDIKPIGNLFKTEVREMAKY---------LG-----IPK 176 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQ-----EYNDETVR 516 I+EK PSA L QTD++ L Y LD I+K E +N D+ E V Sbjct: 177 EIIEKPPSAGLWEGQTDEDELGVKYETLDKILK----CYEEGMNADEVVKKLGVEKEVVD 232 Query: 517 YVEHLLYGSEYKRRQAP 533 + +L+ +E+KR P Sbjct: 233 KIFNLIKKNEHKRTLPP 249 >gi|15894337|ref|NP_347686.1| NAD synthetase [Clostridium acetobutylicum ATCC 824] gi|15023963|gb|AAK79026.1|AE007620_7 NH(3)-dependent NAD(+) synthetase [Clostridium acetobutylicum ATCC 824] gi|325508465|gb|ADZ20101.1| NAD synthetase [Clostridium acetobutylicum EA 2018] Length = 636 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 148/627 (23%), Positives = 255/627 (40%), Gaps = 102/627 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+ A V D+ N+ + ++A +++F EL I+ Y DL + + I Sbjct: 6 VKISSACPKTNVADVDFNVKNIKLCIDKALADNSKVVVFPELSITSYTCGDLFGQSTLIN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L D +VVG P + N +L G+I+ + K +PNY EF+ Sbjct: 66 NSLKGIKELCDFLIDKDIVVVVGAPLLYNYCLYNCAYVLFNGSILGIVPKSYIPNYVEFY 125 Query: 125 EKRTFISG------YSNDP----------IVFR--DIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G ++ P ++FR D++LGI ICED+W +L Sbjct: 126 EKRWFTEGLNLKGQFAQFPFQQDVPFGCDLIFRCGDLKLGIEICEDLWAPIPPSSYLSLM 185 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDG-ASFCF 223 GA + +++AS +K R +++ Q IY + +++F G C Sbjct: 186 GANVILNISASNEVVSKADYRRSLISNQSGRCMCSYIYSSAGVFESSTDVVFSGHLLICE 245 Query: 224 DGQ------------------------QQLAFQMKHFSEQNFMTEW---HYDQQLSQWNY 256 +G+ Q + F + + ++ + D LS W+ Sbjct: 246 NGRILSENDRFERDNLVLTSMIDLEKLQSERLKNSTFKDSVRLCDFKPNYIDFNLSNWDI 305 Query: 257 MSDDS--ASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 D S ++P E + + +N L + +IG+SGG+DS L Sbjct: 306 GDFDRFIDSHPFVPSNERQREERCKEIFNIQTAGLAKRFTHTGLKRAVIGISGGLDSTLA 365 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY---DVLPIHDL-- 358 + V D LG ++N+ T+ +P T+ ++ +A K LGC + D++P L Sbjct: 366 LVVTVKTFDMLGIDRKNIITVTMPGFGTTDKTYNNAVDLCKHLGCDFREIDIVPACLLHF 425 Query: 359 --VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 +NH EE + EN+Q+R R ILM ++N +L+ T + SE+++G+ Sbjct: 426 KDINH---------PEEKHDVTYENVQARERTQILMDIANKEGGLLIGTGDLSELALGWC 476 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSA 471 T GD + + KT V L + +T + L + P +L K Sbjct: 477 TYNGDHMSMYAVNCSIPKTLVRYLVDYVAEKELTGEVSKTLIDILNTPVSPELLPKDAKG 536 Query: 472 ELRPHQTDQESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETVRYVEH 520 + Q ++ + PY + D + K I E++F N Y+ ET+ + Sbjct: 537 NI--SQKTEDIIGPYELHDFFLYYFIKQGSEPEKIIFMAEKAFKNT---YSRETIEKWFN 591 Query: 521 L----LYGSEYKRRQAPVGTKITAKSF 543 L + ++KR P G K+ S Sbjct: 592 LFIKRFFNQQFKRSAIPDGPKVGTISL 618 >gi|326790646|ref|YP_004308467.1| NAD+ synthetase [Clostridium lentocellum DSM 5427] gi|326541410|gb|ADZ83269.1| NAD+ synthetase [Clostridium lentocellum DSM 5427] Length = 647 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 143/617 (23%), Positives = 262/617 (42%), Gaps = 88/617 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N + + + A+++G +I F EL I+GY DL F+ + ++ Sbjct: 5 VKLAAAVPSVRVADCYYNKEQILKQIQLADQEGAQVIGFPELCITGYTCADLFFQTTLLE 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ + T IV+G P ++ + N +L G ++ V K +PNY+EF+ Sbjct: 65 SAKKALGEIAKATRKMEMLIVLGLPLMIEDELYNCAAVLLKGKVLGVVPKSYIPNYNEFY 124 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F G ++F ++++G+ ICED+W L G Sbjct: 125 EKRWFALGTDLGIGEMTLLGEKVPVGTDLLFECGELKVGVEICEDVWTPIPPSSLLTLAG 184 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDGASFC-- 222 A + +L+AS K R ++++ Q + +YV+ G ++ +L+F G S Sbjct: 185 ANVIVNLSASNEIIAKRNYRRQLISQQSARTLCAYLYVS-AGAEESTTDLVFSGHSLIAE 243 Query: 223 -----------------------FDGQQQLAFQMKHF--SEQNFMTEWHY--DQQLSQWN 255 + Q+ + K + S + FM E + LS Sbjct: 244 NGAIIKENEKLIDTDYVLVADIDLERLQKDRIKGKSYGDSRKLFMPEVRRIEGETLSYRG 303 Query: 256 YMSDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 A ++P E D ++ V L+ + + IIG+SGG+DS L Sbjct: 304 TFKGRIARKPFVPHAAETRDKRCEDIFSLQVAGLKKRLSHTGSKRAIIGISGGLDSTLAL 363 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 +AV D LG ++ V + +P T+ ++ E+A + LG +PI FS Sbjct: 364 LVAVQVFDDLGWDRKGVVGVTMPGFGTTDRTYENALQLMRELGITMREIPIAAACKQHFS 423 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + E I EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 424 DIGH--DENVHDITYENTQARERTKILMNIANQGGGMVVGTGDLSELALGWCTYNGDHMS 481 Query: 425 GF----NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 + + K L ++ V+ ++ ++ + L L + P +L + E+ Q + Sbjct: 482 MYAVNTSVPKTLVRSLVYTISKRQSEKVKDTLLDVLDTPVSPELLPVGKNGEML--QKTE 539 Query: 481 ESLPPYPILDDIIKRIVE-----------NEESFINNDQE----YNDETV----RYVEHL 521 +++ PY + D + ++ + +F ++E Y+ ET+ + Sbjct: 540 DTVGPYELHDFFLYYLLRFGFSPSKIYFLAKTAFAVKEEEIDELYSHETILKWLKVFYRR 599 Query: 522 LYGSEYKRRQAPVGTKI 538 + ++KR P G KI Sbjct: 600 FFSQQFKRSCLPDGPKI 616 >gi|291523610|emb|CBK81903.1| NAD+ synthetase [Coprococcus catus GD/7] Length = 638 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 134/559 (23%), Positives = 229/559 (40%), Gaps = 74/559 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A + V D N A A EA QG+ L++ EL ++GY DL ++S + Sbjct: 6 LRVAAATPDIRVADCNFNGASAAALVSEAYEQGVSLLVLPELCLTGYTCSDLFLQESLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ TL T D ++ G P + N +L G+I+ K LP YSEF+ Sbjct: 66 GAGKALLTLTEATRDKNMVVLAGLPLTVNGVLYNVAAVLHDGDILGFVPKSYLPTYSEFY 125 Query: 125 EKRTFISGYSNDPIVFRDIR-------------------LGILICEDIWKNSNICKHLKK 165 E R + SG + V + R LGI ICED+W Sbjct: 126 EGRHYHSGADIETDVLFNGRTYPFGTRLLFRCRQMPAFTLGIEICEDLWVAQPPSISHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R +V+GQ + + IY + G+ +L+F + Sbjct: 186 AGATVIANLSASDETTGKDIYRRSLVSGQSARLVCGYIYADAGEGESSTDLVFGAHNLIC 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ------WNYMSDDSASTMYIPLQEEEADYN 277 + LA + + FS Q M + + +S+ W D+ + L+ E D Sbjct: 246 ENGSILA-ESERFSNQMIMADMDMSKLISERRRMTTWQPKFDNGYRVIDFDLEMHEVDLR 304 Query: 278 ACV-------------------------LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + + L+ + + ++G+SGG+DS L + Sbjct: 305 RFIDPHPFVPDDAMDRTRRCEEILTIQAMGLKKRLAHTHCRHAVVGISGGLDSTLALLVT 364 Query: 313 VDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A + + + + +P T+ ++ +A + LG + + I + V FS + Sbjct: 365 VRAFDMLDMDRSQIMAVTMPCFGTTDRTYHNACELVRRLGATLEEVDIKEAVTLHFSDIG 424 Query: 368 QFLQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 Q +P+ + EN Q+R R +LM ++N M++ T + SE+++G+ T GD Sbjct: 425 Q----DPANHDVTYENGQARERTQVLMDIANRLGGMVIGTGDMSELALGWATYNGDHMSM 480 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + T+ L E + IL+ S EL P Q Sbjct: 481 YGVNASVPKTLVRHLVRYCAD---TADSQTLKETL-LDILDTPVSPELIPPEDGQISQKT 536 Query: 480 QESLPPYPILDDIIKRIVE 498 ++ + PY + D + I+ Sbjct: 537 EDLVGPYELHDFFLYHILR 555 >gi|78186447|ref|YP_374490.1| NAD synthetase [Chlorobium luteolum DSM 273] gi|123583355|sp|Q3B5D4|NADE_PELLD RecName: Full=NH(3)-dependent NAD(+) synthetase gi|78166349|gb|ABB23447.1| NH(3)-dependent NAD(+) synthetase [Chlorobium luteolum DSM 273] Length = 277 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 157/295 (53%), Gaps = 40/295 (13%) Query: 269 LQEEEADYNACVLS------LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ 322 +Q ++ D N +L L++ ++K F V++GLSGGIDSA+ A +AV ALG E+V Sbjct: 1 MQPQDLDLNYGLLEDILKAFLQNEIRKFGFSSVVLGLSGGIDSAVVAELAVRALGPEHVL 60 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG--IVAE 380 + +PYK +S +SLE A + L K + P+ + + FF ++ P G + Sbjct: 61 ALKMPYKESSRESLEHADLMIRRLNIKAEERPVTPMADDFF-------RDVPEGERLRRG 113 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 NI +R R +L +S +++ TSNK+E+ +GYGT++GDM+ NPL DLYKTQV Sbjct: 114 NIMARTRMVLLYDVSARDGSLVAGTSNKTELLLGYGTMFGDMASAVNPLGDLYKTQV--- 170 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE- 498 G+ LG IP +++K+PSA+L Q+D+ L Y +D ++ ++E Sbjct: 171 ------RGLARHLG-----IPSILIDKAPSADLWEGQSDESDLGFSYGEVDLLLYMMLEL 219 Query: 499 --NEESFINN--DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 E+ + + D V ++ ++YK R PV KI+ ++ G D Y Sbjct: 220 RMEREAILGEGVSASFYDR----VRKMVVRNQYK-RLMPVIAKISGRTPGIDFRY 269 >gi|189346066|ref|YP_001942595.1| NAD synthetase [Chlorobium limicola DSM 245] gi|189340213|gb|ACD89616.1| NAD+ synthetase [Chlorobium limicola DSM 245] Length = 283 Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 101/295 (34%), Positives = 151/295 (51%), Gaps = 38/295 (12%) Query: 267 IPLQEEEADYNAC--VLS--LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ 322 +P ++ DY+ +L+ LR+ VQK F V IGLSGGIDSA+ +AV A G V Sbjct: 2 MPARDLHLDYSLVEDILTSFLRNEVQKFGFRSVAIGLSGGIDSAVVIELAVRAFGAGQVL 61 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-- 380 +M+PY+ +SP+SLE A LG + +V+ I V+ F++ P G + Sbjct: 62 GVMMPYRSSSPESLEHAELMISRLGVRSEVVDISPAVD-------AFVRSVPEGDLLRRG 114 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 NI +R R L +S +++ TSNK+E+ +GYGTL+GDM+ NP+ DLYKTQ+ Sbjct: 115 NIMARTRMVYLYDISARDCRLIIGTSNKTELLLGYGTLFGDMASAINPVGDLYKTQL--- 171 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN 499 G+ LG IP ++ K PSA+L Q+D+ L Y D I+ ++E Sbjct: 172 ------RGLARHLG-----IPEPLIAKVPSADLWEGQSDEADLGFSYEDADSILYMMLEK 220 Query: 500 EESFINNDQEYNDETV-----RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + Q E V V ++ ++YK R PV KI+ ++ G D Y Sbjct: 221 R----MDRQSMLAEGVPAAFYDRVRKMVVSNQYK-RMMPVIAKISGRTPGIDFRY 270 >gi|291537241|emb|CBL10353.1| NAD+ synthetase [Roseburia intestinalis M50/1] Length = 644 Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 144/615 (23%), Positives = 259/615 (42%), Gaps = 93/615 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A V D N ++ +EA G +I+ EL I+GY DL ++ ++ Sbjct: 6 VKVAAVTPKIRVADTGYNAKVICQSVKEAAEAGAKVIVLPELCITGYTCGDLFLQEKLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + T D A + VG P + + N L+ G I+ + K LPNY+EF+ Sbjct: 66 EAKEELLHIAAFTTDVDAIVFVGLPLAYKGKLYNVAAALNRGKILGIVPKTYLPNYNEFY 125 Query: 125 EKRTFISGYS-----------NDPIVFR---------DIRLGILICEDIWKNSNICKHLK 164 E R F G P+ R ++ + +CED+W + Sbjct: 126 EARHFTRGMEEVADVRLTEELTVPMGTRQLFTCLELPELVIAAELCEDLWTMNPPSIGHA 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K R E+V GQ + + IY + G+ ++++ G + Sbjct: 186 MHGATLIVNLSASDETTGKPAYRRELVKGQSARLLCGYIYASAGDGESTQDVVYSGHNLI 245 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI------PLQEEEADY 276 + + LA + + F Q TE + S+ M+ T + LQ EE Sbjct: 246 AENGRLLA-ESELFDAQTISTEIDVSRLASERRRMTTFETVTEPVYRENVFSLQMEETKL 304 Query: 277 NACV-------------------------LSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 + + L+ ++ + +IG+SGG+DS L + Sbjct: 305 TRYIDPMPFVPSGERDRTLRCEEILSIQSMGLKKRLEHTHCKSAVIGISGGLDSTLALLV 364 Query: 312 AV---DALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 V DALG + N++ + +P T+ ++ ++A + + LG + + I D VN F + Sbjct: 365 TVRAFDALGMDHSNIKAVTMPGFGTTDRTYDNAVSLIRCLGADFIEVDIKDAVNIHFRDI 424 Query: 367 SQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 Q +PS + EN Q+R R ILM ++N S M++ T + SE+++G+ T GD Sbjct: 425 GQ----DPSMHDVTYENGQARERTQILMDIANKSGGMVIGTGDLSELALGWATYNGDHMS 480 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQT 478 + + KT V L + + T G L +V+ +L+ S EL P Q Sbjct: 481 MYAVNASVPKTLVRHLVRY---YADTCGDETLKQVL-LDVLDTPVSPELLPPEDGKISQK 536 Query: 479 DQESLPPYPILDDIIKRIVE-----------NEESFINNDQEYNDETV-RYVEHL---LY 523 ++ + PY + D + ++ +++F Y+D T+ +++E + Sbjct: 537 TEDLVGPYELHDFYLYHMLRLSYAPAKVYRLAKQAFAGT---YDDATIFKWLETFYRRFF 593 Query: 524 GSEYKRRQAPVGTKI 538 ++KR P G K+ Sbjct: 594 AQQFKRSCLPDGPKV 608 >gi|157737493|ref|YP_001490176.1| NH(3)-dependent NAD+ synthetase [Arcobacter butzleri RM4018] gi|315637219|ref|ZP_07892439.1| NAD+ synthetase [Arcobacter butzleri JV22] gi|157699347|gb|ABV67507.1| NH(3)-dependent NAD+ synthetase [Arcobacter butzleri RM4018] gi|315478491|gb|EFU69204.1| NAD+ synthetase [Arcobacter butzleri JV22] Length = 254 Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 75/221 (33%), Positives = 131/221 (59%), Gaps = 22/221 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+D V K F KV +GLSGG+DSA+ A + +A GK N+ +++P +++S S+E A Sbjct: 15 LKDEVSKAGFEKVTVGLSGGLDSAVVAILCKEAFGK-NLNCVLMPSQFSSQSSIEHAIEV 73 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + +YD++ I +V+ F M + + N +R+R ++L +S K+++ Sbjct: 74 CEKFDIRYDIVSIEPMVSAFLKNM------DNDKLRIGNFSARMRMSVLYDISFKEKSLV 127 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNKSE+ +GYGT++GD++ NP+ ++YK+ F+ A LG +P Sbjct: 128 VGTSNKSELLLGYGTIFGDIACAINPIGEIYKSDEFEFAKL---------LG-----VPE 173 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES 502 SIL K+PSA+L Q+D++ L Y +DD++K +V++++S Sbjct: 174 SILTKAPSADLWEGQSDEDELGHTYKEIDDLLKLMVDDKKS 214 >gi|34540346|ref|NP_904825.1| NAD synthetase [Porphyromonas gingivalis W83] gi|34396658|gb|AAQ65724.1| glutamine-dependent NAD+ synthetase [Porphyromonas gingivalis W83] Length = 647 Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 142/567 (25%), Positives = 236/567 (41%), Gaps = 78/567 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + R EA+ +G++++ F EL I+GY DL F+ + Sbjct: 6 MKVAAAVPFVKVADCEYNIERIDRMVHEADAKGVEIMTFPELSITGYSCGDLFFQPFLQE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ L T + ++VG P + +E + NS V+ G I+ K LPNY EF Sbjct: 66 RANEALCRLVEQTANTTVMVIVGMPLRVEEKLFNSAVVFQQGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTF----------IS-GYSNDPI----VFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E R F IS G + PI +F+ + +GI ICED+W L G Sbjct: 126 EARWFSPAHTLQYSTISIGQHSVPIGRNLIFKCGTVGVGIEICEDMWTPFTPGTRLCLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L++S K +++G S +Y + G+ +++F G +F + Sbjct: 186 AEVIFNLSSSNENAGKHSYLRSLISGLSSQGICAYVYASSGYGESSTDIVFTGKAFIAEA 245 Query: 226 QQQLAFQMKHFSEQNFM------------------------TEWHYDQQLSQWNYMSDDS 261 ++ +M+ F + M T +D++ +Q + Sbjct: 246 -GEIVEEMERFRYEERMIISDIDVSRIQTERLINSSFKAAVTFHTHDEKFNQLPFKLRSR 304 Query: 262 ASTMYI-------PLQEEEAD--------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++ + P E+ D N V L + +IG+SGG+DSA Sbjct: 305 QESLPMTRRVDRNPFMPEDKDRKERSREMINIQVCGLMQRLLHMGAEHAVIGISGGLDSA 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + A L ++N+ + +P TS ++ +A A +A+G + I + Sbjct: 365 LALIVCAQAFDRLDLPRKNIIAVTMPGFGTSDRTYRNAFALMEAIGVTIKEIDIKEACLR 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + E EN Q+R R ILM L+N A ++ T + SE+++G+ T GD Sbjct: 425 HFEAIGH--NPEVQDTTFENTQARERTQILMNLANIYNAPVIGTGDLSELALGWVTYNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILEKSPSAELRP----- 475 + + KT V L H SG L + I+ S EL+P Sbjct: 483 HMSMYAVNAGIAKTTVQILV----DHIAHSGWLDEAASAVLLDIVRTPISPELKPVGQDG 538 Query: 476 --HQTDQESLPPYPILDDIIKRIVENE 500 Q ++ + PY + D I + NE Sbjct: 539 NISQKTEDLVGPYELHDFFIYHFLHNE 565 >gi|240143633|ref|ZP_04742234.1| glutamine-dependent NAD+ synthetase [Roseburia intestinalis L1-82] gi|257204381|gb|EEV02666.1| glutamine-dependent NAD+ synthetase [Roseburia intestinalis L1-82] Length = 660 Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 144/615 (23%), Positives = 259/615 (42%), Gaps = 93/615 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A V D N ++ +EA G +I+ EL I+GY DL ++ ++ Sbjct: 22 VKVAAVTPKIRVADTGYNAKVICQSVKEAAEAGAKVIVLPELCITGYTCGDLFLQEKLLR 81 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + T D A + VG P + + N L+ G I+ + K LPNY+EF+ Sbjct: 82 EAKEELLHIAAFTTDVDAIVFVGLPLAYKGKLYNVAAALNRGKILGIVPKTYLPNYNEFY 141 Query: 125 EKRTFISGYS-----------NDPIVFR---------DIRLGILICEDIWKNSNICKHLK 164 E R F G P+ R ++ + +CED+W + Sbjct: 142 EARHFTRGMEEVADVRLTEELTVPMGTRQLFTCLELPELVIAAELCEDLWTMNPPSIGHA 201 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K R E+V GQ + + IY + G+ ++++ G + Sbjct: 202 MHGATLIVNLSASDETTGKPAYRRELVKGQSARLLCGYIYASAGDGESTQDVVYSGHNLI 261 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI------PLQEEEADY 276 + + LA + + F Q TE + S+ M+ T + LQ EE Sbjct: 262 AENGRLLA-ESELFDAQTISTEIDVSRLASERRRMTTFETVTEPVYRENVFSLQMEETKL 320 Query: 277 NACV-------------------------LSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 + + L+ ++ + +IG+SGG+DS L + Sbjct: 321 TRYIDPMPFVPSGERDRTLRCEEILSIQSMGLKKRLEHTHCKSAVIGISGGLDSTLALLV 380 Query: 312 AV---DALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 V DALG + N++ + +P T+ ++ ++A + + LG + + I D VN F + Sbjct: 381 TVRAFDALGMDHSNIKAVTMPGFGTTDRTYDNAVSLIRCLGADFIEVDIKDAVNIHFRDI 440 Query: 367 SQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 Q +PS + EN Q+R R ILM ++N S M++ T + SE+++G+ T GD Sbjct: 441 GQ----DPSMHDVTYENGQARERTQILMDIANKSGGMVIGTGDLSELALGWATYNGDHMS 496 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQT 478 + + KT V L + + T G L +V+ +L+ S EL P Q Sbjct: 497 MYAVNASVPKTLVRHLVRY---YADTCGDETLKQVL-LDVLDTPVSPELLPPEDGKISQK 552 Query: 479 DQESLPPYPILDDIIKRIVE-----------NEESFINNDQEYNDETV-RYVEHL---LY 523 ++ + PY + D + ++ +++F Y+D T+ +++E + Sbjct: 553 TEDLVGPYELHDFYLYHMLRLSYAPAKVYRLAKQAFAGT---YDDATIFKWLETFYRRFF 609 Query: 524 GSEYKRRQAPVGTKI 538 ++KR P G K+ Sbjct: 610 AQQFKRSCLPDGPKV 624 >gi|331270057|ref|YP_004396549.1| NAD+ synthetase [Clostridium botulinum BKT015925] gi|329126607|gb|AEB76552.1| NAD+ synthetase [Clostridium botulinum BKT015925] Length = 638 Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 148/622 (23%), Positives = 259/622 (41%), Gaps = 92/622 (14%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I +A PVV GDI NI ++ + ++ LI+ EL I+GY DL ++ I+ Sbjct: 4 IRVASACPVVNVGDIKFNIENIKKCINLSIKENSKLIVLPELSITGYTCADLFLNQTLIE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + + + I VG P + N I+ G I+ + K LPNYSEF+ Sbjct: 64 ESIEGIKDICNFSLNKDILISVGAPLLYNYCLYNCAYIIYNGKILGIVPKSYLPNYSEFY 123 Query: 125 EKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY+ N P ++F + G ICED+W +L Sbjct: 124 EKRWFTEGYNLIDKKVDLSFQKNIPFGINLIFSSGTFKFGFEICEDLWTVIPPSSYLALM 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R IV+ Q + +Y + +++F G + Sbjct: 184 GANIIGNLSASNELVSKADYRTSIVSSQSARCMCSYVYASSGVFESTTDVVFSGHLIISE 243 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQW---NYMSDDSASTM---------------- 265 + L + E +T +L+ N DS T Sbjct: 244 NGRILRENDRFQRENQIITSIIDVDKLNNMRIKNLSFRDSKRTCPFAPFEIVFEFNNTNI 303 Query: 266 -----------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E E + +N L + KVI+G+SGG+DS L Sbjct: 304 DVFDRPIHKHPFVPANEHEREIRSKEIFNIQSSGLAKRLNHTRLEKVIVGISGGLDSTLA 363 Query: 309 AAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY-DVLPIHDLVNHF 362 +AV+ + ++N+ TI +P T+ ++ +A K LG + ++ ++ + HF Sbjct: 364 LLVAVNTFDLLKIPRKNIITITMPGFGTTDRTYNNAVDLCKKLGTDFREINIVNSCLQHF 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + E I EN+Q+R R ILM L+N A+L+ T + SEI++G+ T GD Sbjct: 424 KDIGHP---AEIHDITYENVQARERTQILMDLANKEGALLIGTGDLSEIALGWATYNGDH 480 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSAELRPHQ 477 ++ + KT V L + H + L + P +L K ++ Q Sbjct: 481 MSMYSVNCSIPKTLVRYLVQFAAEHESEDNISEILIDILNTPVSPELLPKDKDGKI--AQ 538 Query: 478 TDQESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETV-RYVEHLL--- 522 ++ + PY + D + K ++ +++F N +Y+++T+ ++++ + Sbjct: 539 KTEDIVGPYELHDFFLYYFIRQNATPEKILLLAKKAFKN---DYDEDTIKKWLDKFIRRF 595 Query: 523 YGSEYKRRQAPVGTKITAKSFG 544 + ++KR P G K+ S Sbjct: 596 FTQQFKRSAIPDGPKVGTISLS 617 >gi|313826865|gb|EFS64579.1| NAD+ synthetase [Propionibacterium acnes HL063PA1] gi|314979103|gb|EFT23197.1| NAD+ synthetase [Propionibacterium acnes HL072PA2] gi|315089649|gb|EFT61625.1| NAD+ synthetase [Propionibacterium acnes HL072PA1] gi|327334026|gb|EGE75741.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL096PA3] Length = 689 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 149/648 (22%), Positives = 259/648 (39%), Gaps = 119/648 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV----------------------FR-----DIRLGILICEDIWKNSN 158 KR F G ++ FR D+ + +CED+W Sbjct: 135 KRHFAVGTGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----QQLSQWNYMSDDSA--------- 262 DG + ++ LA + E + + + D ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSF--DDNALAQPAQAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T++ P + D YN V LR ++ K+ Sbjct: 313 RTTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D +G + ++ +P T+ + +A +ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +VL I MS + E + EN+Q+ +R + L ++N ++L T + Sbjct: 433 EVLDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDL 492 Query: 409 SEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILE 466 SE+++G+ T GD + + KT + L W I+SG T V+ S+L Sbjct: 493 SELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVLESVLG 548 Query: 467 KSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN--------------------- 499 S EL P Q+ Q + PY + D + ++ + Sbjct: 549 TEISPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVG 608 Query: 500 --EESFINNDQEYND-----ETVRYVEHLLYGSEYKRRQAPVGTKITA 540 F + D+ D + R G+++KR P G K+ A Sbjct: 609 SWSPGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVA 656 >gi|313813912|gb|EFS51626.1| NAD+ synthetase [Propionibacterium acnes HL025PA1] Length = 689 Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 139/575 (24%), Positives = 238/575 (41%), Gaps = 101/575 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQTSRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV----------------------FR-----DIRLGILICEDIWKNSN 158 KR F G ++ FR D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----QQLSQWNYMSDDSA--------- 262 DG + ++ LA + E + + + D ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSF--DDNALAQPAQAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T++ P + D YN V LR ++ K+ Sbjct: 313 RTTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D +G + ++ +P T+ + +A +ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSG-------IVAENIQSRIRGNILMALSNHSKAMLL 403 +VL I MS P+G + EN+Q+ +R + L ++N ++L Sbjct: 433 EVLDIRPAATQMLKGMSH-----PAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVL 487 Query: 404 TTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIP 461 T + SE+++G+ T GD + + KT + L W I+SG T V+ Sbjct: 488 GTGDLSELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVL 543 Query: 462 PSILEKSPSAELRPH------QTDQESLPPYPILD 490 S+L S EL P Q+ Q + PY + D Sbjct: 544 ESVLGTEISPELVPARPGEKIQSTQAKIGPYELQD 578 >gi|289428164|ref|ZP_06429863.1| NAD+ synthetase [Propionibacterium acnes J165] gi|289158644|gb|EFD06848.1| NAD+ synthetase [Propionibacterium acnes J165] Length = 689 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 138/570 (24%), Positives = 237/570 (41%), Gaps = 91/570 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV----------------------FR-----DIRLGILICEDIWKNSN 158 KR F G ++ FR D+ + +CED+W Sbjct: 135 KRHFAVGTGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----QQLSQWNYMSDDSA--------- 262 DG + ++ LA + E + + + D ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSF--DDNALAQPAQAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T++ P + D YN V LR ++ K+ Sbjct: 313 RTTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D +G + ++ +P T+ + +A +ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +VL I MS + E + EN+Q+ +R + L ++N ++L T + Sbjct: 433 EVLDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDL 492 Query: 409 SEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILE 466 SE+++G+ T GD + + KT + L W I+SG T V+ S+L Sbjct: 493 SELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVLESVLG 548 Query: 467 KSPSAELRPH------QTDQESLPPYPILD 490 S EL P Q+ Q + PY + D Sbjct: 549 TEISPELVPARPGEKIQSTQAKIGPYELQD 578 >gi|188995305|ref|YP_001929557.1| NAD synthetase [Porphyromonas gingivalis ATCC 33277] gi|188594985|dbj|BAG33960.1| glutamine-dependent NAD synthetase [Porphyromonas gingivalis ATCC 33277] Length = 647 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 140/566 (24%), Positives = 234/566 (41%), Gaps = 76/566 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + R EA+ +G++++ F EL I+GY DL F+ + Sbjct: 6 MKVAAAVPFVKVADCEYNIERIDRMVHEADTKGVEIMTFPELSITGYSCGDLFFQPFLQE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ L T + ++VG P + +E + NS V+ G I+ K LPNY EF Sbjct: 66 RANEALCRLVEQTANTTVMVIVGMPLRVEEKLFNSAVVFQQGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTF----------IS-GYSNDPI----VFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E R F IS G + PI +F+ + +GI ICED+W L G Sbjct: 126 EARWFSPAHTLQYSTISIGQHSVPIGRNLIFKCGTVGVGIEICEDMWTPFTPGTRLCLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L++S K +++G S +Y + G+ +++F G +F + Sbjct: 186 AEVIFNLSSSNENAGKHSYLRSLISGLSSQGICAYVYASSGYGESSTDIVFTGKAFIAEA 245 Query: 226 QQQLAFQMKHFSEQNFM------------------------TEWHYDQQLSQWNYMSDDS 261 ++ +M+ F + M T +D++ +Q + Sbjct: 246 -GEIVEEMERFRYEERMIISDIDVSRIQTERLINSSFKAAVTFHTHDEKFNQLPFKLRSR 304 Query: 262 ASTMYI-------PLQEEEAD--------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++ + P E+ D N V L + +IG+SGG+DSA Sbjct: 305 QESLPMTRRVDRNPFMPEDKDRKERSREMINIQVCGLMQRLLHMGAEHAVIGISGGLDSA 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + A L ++N+ + +P TS ++ +A A +A+G + I + Sbjct: 365 LALIVCAQAFDRLDLPRKNIIAVTMPGFGTSDRTYRNAFALMEAIGVTIKEIDIKEACLR 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + E EN Q+R R ILM L+N A ++ T + SE+++G+ T GD Sbjct: 425 HFEAIGH--NPEVQDTTFENTQARERTQILMNLANIYNAPVIGTGDLSELALGWVTYNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V L G L + I+ S EL+P Sbjct: 483 HMSMYAVNAGIAKTTVQILVDHIAHRG---WLDEAASAVLLDIVRTPISPELKPVGQDGN 539 Query: 476 -HQTDQESLPPYPILDDIIKRIVENE 500 Q ++ + PY + D I + NE Sbjct: 540 ISQKTEDLVGPYELHDFFIYHFLHNE 565 >gi|116331638|ref|YP_801356.1| NAD(+) synthase (glutamine-hydrolyzing) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125327|gb|ABJ76598.1| NAD(+) synthase (glutamine-hydrolyzing) [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 644 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 167/629 (26%), Positives = 261/629 (41%), Gaps = 111/629 (17%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +++ L V D GN+ K +R E+ + DLILF EL ISGY ED F Sbjct: 1 MQPVRLTSVSLKTRVFDFTGNLNKIKRVLEQ--EKNSDLILFPELCISGYGCEDSFFFPR 58 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + +++ L T + +VVG P + N +L G + + K NL + Sbjct: 59 IWKKSWNSLTELLPLTKN--KIVVVGLPIFQNPYLFNCAAVLCNGVVAGIVPKSNLASTG 116 Query: 122 EFHEKRTFISGYSN--------------DPIVFRDIRL--GILICEDIWKNSNICKHLKK 165 +E R F G ++F R G+ ICED W L + Sbjct: 117 VHYENRWFTRGEETRKNFAAPDGSVIPFGSLIFETDRFSFGVEICEDSWVLQKPSIPLAE 176 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIV---TGQISHVHLPIIYVNQVGGQD-ELIFDGAS- 220 G + + S AS + K + R I + + S+V+L + N G + LIF+G S Sbjct: 177 AGTDLILSPGASHFAFGKQRIRRRIFQENSRRESNVYL---FSNLCGNESGRLIFEGGSM 233 Query: 221 --------------------FC---FDGQQQLAFQMKHF--SEQNFMTEWHYDQQLSQWN 255 FC D + A + K+F S F + +++ Sbjct: 234 IVQNGKLISESQRLFFGDFNFCSSEIDFETSRADRAKNFRPSRNRFNPKKSFEENRIHLG 293 Query: 256 YMSDDSASTMYIPL------QEEEA--DYN-ACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + PL QEEE+ D+ A L L DY+ + + LSGG DS+ Sbjct: 294 LKFPKRTPKINHPLPEPSVSQEEESYLDFTRAVALGLFDYLINSKTKGYTLSLSGGADSS 353 Query: 307 LCA-------AIAVDALGKE--NVQTI----MLPYKYTSPQSLEDAA-ACAKALGCKYDV 352 +CA IA LG++ N Q I +L Y + + D + AKAL DV Sbjct: 354 VCALLVTAMKKIAKQELGEDFFNSQGIEEDFILSTLYQATVNNSDRTRSLAKALA--EDV 411 Query: 353 LPIHD--LVNHFFSLMSQFLQE--------EPSGIVAENIQSRIRGNILMALSNHSKAML 402 +H ++ +SQ + E +V +NIQ+RIR I+ L+N + +L Sbjct: 412 KSVHGELTIDTEVQNISQKISEITGISFNWNEHNLVLQNIQARIRSPIIWMLANLNGHLL 471 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L+T N+SE SVGY T+ GD SG PL + K + + + + G + P Sbjct: 472 LSTGNRSEASVGYTTMDGDSSGSVAPLAGVSKEFILKWMRF-----VAEGRDSILPAYPS 526 Query: 463 --SILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIVENEESF------INNDQEYN 511 I+ PSAEL+P Q D++ L PYP+L I + + F ++ D E Sbjct: 527 VKEIVLSPPSAELKPLEDEQEDEKDLMPYPLLQKIEELFIVRGAGFSEIVQLLSKDSEIQ 586 Query: 512 -------DETVRYVEHLLYGSEYKRRQAP 533 +E+VR L + +++KR + P Sbjct: 587 KSVSGGLEESVRKYIALFHRNQWKRERLP 615 >gi|313808558|gb|EFS47018.1| NAD+ synthetase [Propionibacterium acnes HL087PA2] gi|313819098|gb|EFS56812.1| NAD+ synthetase [Propionibacterium acnes HL046PA2] gi|313821625|gb|EFS59339.1| NAD+ synthetase [Propionibacterium acnes HL036PA1] gi|313823761|gb|EFS61475.1| NAD+ synthetase [Propionibacterium acnes HL036PA2] gi|314926101|gb|EFS89932.1| NAD+ synthetase [Propionibacterium acnes HL036PA3] gi|314960940|gb|EFT05041.1| NAD+ synthetase [Propionibacterium acnes HL002PA2] gi|314985915|gb|EFT30007.1| NAD+ synthetase [Propionibacterium acnes HL005PA2] gi|314989225|gb|EFT33316.1| NAD+ synthetase [Propionibacterium acnes HL005PA3] gi|315084910|gb|EFT56886.1| NAD+ synthetase [Propionibacterium acnes HL027PA2] gi|315087441|gb|EFT59417.1| NAD+ synthetase [Propionibacterium acnes HL002PA3] gi|327450400|gb|EGE97054.1| NAD+ synthetase [Propionibacterium acnes HL013PA2] gi|328757666|gb|EGF71282.1| NAD+ synthetase [Propionibacterium acnes HL020PA1] gi|332676654|gb|AEE73470.1| glutamine-dependent NAD(+) synthase [Propionibacterium acnes 266] Length = 689 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 150/653 (22%), Positives = 260/653 (39%), Gaps = 129/653 (19%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV----------------------FR-----DIRLGILICEDIWKNSN 158 KR F G ++ FR D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----QQLSQWNYMSDDSA--------- 262 DG + ++ LA + E + + + D ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSF--DDNALAQPAQAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T++ P + D YN V LR ++ K+ Sbjct: 313 RTTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D +G + ++ +P T+ + +A +ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSG-------IVAENIQSRIRGNILMALSNHSKAMLL 403 +VL I MS P+G + EN+Q+ +R + L ++N ++L Sbjct: 433 EVLDIRPAATQMLKGMSH-----PAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVL 487 Query: 404 TTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIP 461 T + SE+++G+ T GD + + KT + L W I+SG T V+ Sbjct: 488 GTGDLSELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVL 543 Query: 462 PSILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN---------------- 499 S+L S EL P Q+ Q + PY + D + ++ + Sbjct: 544 ESVLGTEISPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWR 603 Query: 500 -------EESFINNDQEYND-----ETVRYVEHLLYGSEYKRRQAPVGTKITA 540 F + D+ D + R G+++KR P G K+ A Sbjct: 604 DASVGSWSPGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVA 656 >gi|168207984|ref|ZP_02633989.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens E str. JGS1987] gi|168214779|ref|ZP_02640404.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens CPE str. F4969] gi|168217473|ref|ZP_02643098.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens NCTC 8239] gi|169342391|ref|ZP_02863456.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens C str. JGS1495] gi|169299511|gb|EDS81575.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens C str. JGS1495] gi|170660703|gb|EDT13386.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens E str. JGS1987] gi|170713785|gb|EDT25967.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens CPE str. F4969] gi|182380446|gb|EDT77925.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens NCTC 8239] Length = 635 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 141/625 (22%), Positives = 267/625 (42%), Gaps = 98/625 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ A + D N+ + A + + +++F EL IS Y DL + I+ Sbjct: 4 IKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNEKLIE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C+ AI L + + VG P + + N ++ G ++ + K +PNYSEF+ Sbjct: 64 NCNLAIKNLVEFSKGKDILMAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGYS-----------------NDPIV-FRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G++ D I F+++++G ICED+W +L Sbjct: 124 EKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNLALM 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDGAS--- 220 GA + +L+AS +K R +V Q + IY + G + +L+F G Sbjct: 184 GANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIY-SSAGVHESTTDLLFSGHMIIA 242 Query: 221 -------------------------FCFDGQ--QQLAFQMKHFSEQN------FMTE--- 244 F D + + ++F+ F+E N F E Sbjct: 243 ENGTIIKENNRFKRENDLLTGIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLENTE 302 Query: 245 -WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++D+++ + ++ + Y E N +L ++ N K +IG+SGG+ Sbjct: 303 IKNFDREIDKHPFL----PKSQYAMEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGL 358 Query: 304 DSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + V + +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 359 DSTLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNA 418 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T Sbjct: 419 ALQHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTY 476 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEVIPPSILEKSPSAEL 473 GD ++ + KT V L ++ +H I++ L L + P +L K ++ Sbjct: 477 NGDHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEALLDILDTPVSPELLPKDKEGKI 536 Query: 474 RPHQTDQESLPPYPILDDIIKRIVEN-----------EESFINNDQEYNDETV-RYVEHL 521 Q ++ + PY + D + +++ +E+F N +Y++ET+ ++++ Sbjct: 537 A--QKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKN---DYDEETLKKWLDKF 591 Query: 522 L---YGSEYKRRQAPVGTKITAKSF 543 + + ++KR P G K+ + S Sbjct: 592 IRRFFTQQFKRSALPDGPKVGSISL 616 >gi|145220016|ref|YP_001130725.1| NAD synthetase [Prosthecochloris vibrioformis DSM 265] gi|189083397|sp|A4SFG4|NADE_PROVI RecName: Full=NH(3)-dependent NAD(+) synthetase gi|145206180|gb|ABP37223.1| NH(3)-dependent NAD(+) synthetase [Chlorobium phaeovibrioides DSM 265] Length = 277 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 90/271 (33%), Positives = 150/271 (55%), Gaps = 26/271 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ ++K F +++GLSGGIDSA+ +AV ALG ENV + +PY+ +S +SLE A Sbjct: 21 LRNEIRKFGFQSLVLGLSGGIDSAVVCELAVRALGAENVLAVKMPYRASSRESLEHAELM 80 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + L + + I V+ FF+ + E S + NI +R R +L +S ++ Sbjct: 81 VERLSIRSEEHDISQPVDAFFTGIP-----EESRLRRGNIMARARMIVLYDVSARDGCLV 135 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSNK+E+ +GYGT++GDM+ NP+ DLYK+QV G+ LG IP Sbjct: 136 AGTSNKTELLLGYGTMFGDMASAVNPIGDLYKSQV---------RGLARHLG-----IPA 181 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETVRYV 518 ++++K+PSA+L Q+D+ L Y +D ++ +++E ++ES + + + V Sbjct: 182 ALIDKAPSADLWQGQSDEADLGFTYEEVDILLYQMLELRMDKESILA--EGVPEPFYARV 239 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 ++ ++YKR PV KI+ ++ G D Y Sbjct: 240 RQMVVRNQYKRLM-PVIAKISGRTPGIDFRY 269 >gi|254458620|ref|ZP_05072045.1| NAD+ synthetase [Campylobacterales bacterium GD 1] gi|207084928|gb|EDZ62215.1| NAD+ synthetase [Campylobacterales bacterium GD 1] Length = 268 Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/272 (32%), Positives = 150/272 (55%), Gaps = 27/272 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L D V+K +V++GLSGG+DSA+ A IA K+++ + +P +Y+S SL+DA A Sbjct: 15 LDDEVRKTGIKRVVVGLSGGLDSAVVAVIAHKTF-KDDLLCVKMPSQYSSQSSLDDADAL 73 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + K I ++ + + L + N SR+R + L +S A++ Sbjct: 74 CRDFSMKAITASIEPMLRAY-----EELNPNMDNLRKGNFSSRMRMSTLFDISARENALV 128 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNKSE+ +GYGTLYGD+S NP+ DLYK++V++LA + LG + Sbjct: 129 LGTSNKSELMLGYGTLYGDLSSAVNPIGDLYKSEVYELADY---------LG-----VTR 174 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN---EESFINNDQEYNDETVRYV 518 SI++K+PSA+L Q+D++ L Y LD+ +K VE+ +E + ++ + + + + Sbjct: 175 SIIDKAPSADLWDGQSDEDDLGYTYAQLDEALKLYVEDRLSKEEIV--EKGIDSKMLDMI 232 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 ++ + +KR+ PV K+T+++ D YP Sbjct: 233 IGRIFRNHFKRKM-PVIAKLTSRTINHDFNYP 263 >gi|50843699|ref|YP_056926.1| NAD synthetase [Propionibacterium acnes KPA171202] gi|289425931|ref|ZP_06427683.1| NAD+ synthetase [Propionibacterium acnes SK187] gi|295131790|ref|YP_003582453.1| NAD+ synthetase [Propionibacterium acnes SK137] gi|50841301|gb|AAT83968.1| glutamine-dependent NAD(+) synthetase [Propionibacterium acnes KPA171202] gi|289153707|gb|EFD02416.1| NAD+ synthetase [Propionibacterium acnes SK187] gi|291375470|gb|ADD99324.1| NAD+ synthetase [Propionibacterium acnes SK137] gi|313765123|gb|EFS36487.1| NAD+ synthetase [Propionibacterium acnes HL013PA1] gi|313771610|gb|EFS37576.1| NAD+ synthetase [Propionibacterium acnes HL074PA1] gi|313812007|gb|EFS49721.1| NAD+ synthetase [Propionibacterium acnes HL083PA1] gi|313817151|gb|EFS54865.1| NAD+ synthetase [Propionibacterium acnes HL059PA1] gi|313832441|gb|EFS70155.1| NAD+ synthetase [Propionibacterium acnes HL007PA1] gi|313834129|gb|EFS71843.1| NAD+ synthetase [Propionibacterium acnes HL056PA1] gi|314916870|gb|EFS80701.1| NAD+ synthetase [Propionibacterium acnes HL005PA4] gi|314919048|gb|EFS82879.1| NAD+ synthetase [Propionibacterium acnes HL050PA1] gi|314921122|gb|EFS84953.1| NAD+ synthetase [Propionibacterium acnes HL050PA3] gi|314956238|gb|EFT00610.1| NAD+ synthetase [Propionibacterium acnes HL027PA1] gi|314958737|gb|EFT02839.1| NAD+ synthetase [Propionibacterium acnes HL002PA1] gi|314968763|gb|EFT12861.1| NAD+ synthetase [Propionibacterium acnes HL037PA1] gi|314975106|gb|EFT19201.1| NAD+ synthetase [Propionibacterium acnes HL053PA1] gi|314977516|gb|EFT21611.1| NAD+ synthetase [Propionibacterium acnes HL045PA1] gi|314985895|gb|EFT29987.1| NAD+ synthetase [Propionibacterium acnes HL005PA1] gi|315096853|gb|EFT68829.1| NAD+ synthetase [Propionibacterium acnes HL038PA1] gi|315100085|gb|EFT72061.1| NAD+ synthetase [Propionibacterium acnes HL059PA2] gi|315102754|gb|EFT74730.1| NAD+ synthetase [Propionibacterium acnes HL046PA1] gi|315107307|gb|EFT79283.1| NAD+ synthetase [Propionibacterium acnes HL030PA1] gi|327333034|gb|EGE74766.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL096PA2] gi|327448742|gb|EGE95396.1| NAD+ synthetase [Propionibacterium acnes HL043PA1] gi|327449063|gb|EGE95717.1| NAD+ synthetase [Propionibacterium acnes HL043PA2] gi|327455558|gb|EGF02213.1| NAD+ synthetase [Propionibacterium acnes HL087PA3] gi|327456216|gb|EGF02871.1| NAD+ synthetase [Propionibacterium acnes HL083PA2] gi|328756777|gb|EGF70393.1| NAD+ synthetase [Propionibacterium acnes HL087PA1] gi|328759059|gb|EGF72675.1| NAD+ synthetase [Propionibacterium acnes HL025PA2] gi|328762168|gb|EGF75664.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL099PA1] Length = 689 Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 139/575 (24%), Positives = 238/575 (41%), Gaps = 101/575 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV----------------------FR-----DIRLGILICEDIWKNSN 158 KR F G ++ FR D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----QQLSQWNYMSDDSA--------- 262 DG + ++ LA + E + + + D ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSF--DDNALAQPAQAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T++ P + D YN V LR ++ K+ Sbjct: 313 RTTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D +G + ++ +P T+ + +A +ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSG-------IVAENIQSRIRGNILMALSNHSKAMLL 403 +VL I MS P+G + EN+Q+ +R + L ++N ++L Sbjct: 433 EVLDIRPAATQMLKGMSH-----PAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVL 487 Query: 404 TTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIP 461 T + SE+++G+ T GD + + KT + L W I+SG T V+ Sbjct: 488 GTGDLSELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVL 543 Query: 462 PSILEKSPSAELRPH------QTDQESLPPYPILD 490 S+L S EL P Q+ Q + PY + D Sbjct: 544 ESVLGTEISPELVPARPGEKIQSTQAKIGPYELQD 578 >gi|289191725|ref|YP_003457666.1| NAD+ synthetase [Methanocaldococcus sp. FS406-22] gi|288938175|gb|ADC68930.1| NAD+ synthetase [Methanocaldococcus sp. FS406-22] Length = 253 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/254 (34%), Positives = 143/254 (56%), Gaps = 17/254 (6%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V++ + V++GLSGGIDS++ A + V ALGK+ V +++P K+T+P+ +E A Sbjct: 12 IKENVEEAKANGVVVGLSGGIDSSVTAYLCVKALGKDKVLGLIMPEKHTNPRDIEHAKMV 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG KY + I D++ F + +E + N+++RIR +L +N ++ Sbjct: 72 AENLGIKYIISDITDILKAFGA-GGYVPTKEFDKMADGNLKARIRMCLLYYFANKYNLLV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSNKSEI VGYGT +GD++ P+ +L+KT+V +LA + LG +P Sbjct: 131 AGTSNKSEIYVGYGTKHGDIACDIRPIGNLFKTEVRELAKY---------LG-----VPK 176 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE-SFINNDQEYNDETVRYVEH 520 I+EK PSA L QTD+ L Y LD+I+K + + I+ + ET+ YV Sbjct: 177 EIIEKPPSAGLWEGQTDEGELGIKYETLDEILKLYEKGKTPEEIHKETNIPLETIEYVFD 236 Query: 521 LLYGSEYKRRQAPV 534 L+ +E+KR P Sbjct: 237 LIKKNEHKRTLPPT 250 >gi|220928628|ref|YP_002505537.1| NAD synthetase [Clostridium cellulolyticum H10] gi|219998956|gb|ACL75557.1| NAD+ synthetase [Clostridium cellulolyticum H10] Length = 642 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 150/625 (24%), Positives = 263/625 (42%), Gaps = 105/625 (16%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +LK+A N AG I KA R A+ QG ++F EL ++ Y DL + + Sbjct: 14 ELKVANCDFN------AGEIIKAVRT---ADSQGAQFVVFPELSVTSYTCGDLFLQTTLQ 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + S+++ + S+T I++G P + N VI+ G+I+ V K +PNYSEF Sbjct: 65 KGALSSLEVIISETSSLECVIILGMPLTLDSRLYNCAVIIKNGSILGVVPKCYIPNYSEF 124 Query: 124 HEKRTFISGYSNDP---------------IVFRDIRL-----GILICEDIWKNSNICKHL 163 +E R F SG P I+F + + G+ ICED+W + Sbjct: 125 YEARWFSSGMDRPPETIDMLGKTVPFGIDILFEAVNMDGLCFGMEICEDLWVPIPPSSNQ 184 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA LF+L+AS K + R E++ Q + +YV+ + +L+F G S Sbjct: 185 ALNGATLLFNLSASNDIVGKHEYREELIKLQSAKCSAAYVYVSSGPNESTTDLVFGGHSL 244 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQL--------SQWNYMSDDSAST---MYIPLQ 270 + LA Q + FS M D Q S + + ++++ Y+ Q Sbjct: 245 ICEYGSVLA-QSERFSFDKKMIMSDIDIQRLVNERFKNSAFKHKTNNTVFRKIPFYVKEQ 303 Query: 271 EE------------------------EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++ E +N L ++ +K +IG+SGG+DS Sbjct: 304 KDDKLLRLIDPHPFVPSDPNARNKRCEEIFNIQTSGLGKRLRHTGLNKCVIGISGGLDST 363 Query: 307 LCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVN 360 L + V D LG ++N+ + +P TS +L ++ + + + I + + Sbjct: 364 LALLVIVKTYDKLGLDRKNIHAVTMPGFGTSSNTLGNSLELMRLMNVTSHRIDIKEACLK 423 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 HF + L + + EN+Q+R R ILM ++N +++ T + SE+++G+ T G Sbjct: 424 HFEDIGHDPLNYD---VTYENVQARERTQILMDMANKIGGLVIGTGDLSELALGWATYNG 480 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D + + KT V L W + + T + S+L+ S EL P Sbjct: 481 DHMSMYAVNSGVPKTLVKYLVQWCADYLFDND----TRNVLLSVLDTPISPELLPTDKEG 536 Query: 476 --HQTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQEYNDETV-RYVEHL 521 Q ++ + PY + D + +V E +F + +Y+ T+ +++E Sbjct: 537 CIQQKTEDIVGPYELHDFYLYHMVRYGAEPDKVYKLAERAF---EGKYDKATIKKWLETF 593 Query: 522 L---YGSEYKRRQAPVGTKITAKSF 543 L + ++KR P G K+ + S Sbjct: 594 LKRFFSQQFKRSCLPDGPKVGSISL 618 >gi|94309625|ref|YP_582835.1| NAD synthetase [Cupriavidus metallidurans CH34] gi|93353477|gb|ABF07566.1| Glutamine-dependent NAD(+) synthetase (NAD(+) synthase (glutamine-hydrolyzing)) [Cupriavidus metallidurans CH34] Length = 716 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 139/568 (24%), Positives = 239/568 (42%), Gaps = 86/568 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N + +A G L+ F EL +S Y +DL +++ ++ Sbjct: 44 RVAVGVPECRVADPAFNAEQTILLARQAADGGAVLVAFPELGLSAYTCDDLFHQRALLRE 103 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C A+ + + A ++VG P + + N V++ G I V K LPNY EF+E Sbjct: 104 CELALQRIVEASAGINAALIVGLPVLVEHQLFNCAVVVAGGKIQGVVPKTYLPNYWEFYE 163 Query: 126 KRTFISG-YSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 R F S + P+V R ICED+W Sbjct: 164 ARQFSSADCAATPLVSLLGAEVPFGADLLFEIESIPFFRFHAEICEDVWVPIPPSSFAAL 223 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V+ Q + +Y + G+ +L +DG + + Sbjct: 224 AGATVLVNLSASNIVIGKSGYRHQLVSQQSARCLAAYLYTSAGKGESTTDLAWDGQALIY 283 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD----------------------QQLSQWNYMS--D 259 + + L + + F++ + + D +++ +++ +S Sbjct: 284 ENGELLG-ESERFADSSHLLFADVDLERLSRERMHQTSFGQSVRRHHEEVERFDTVSFHI 342 Query: 260 DSASTMYIPLQEEEAD------------------YNACVLSLRDYVQKNNFHKVIIGLSG 301 D ST +PLQ + A YN V +L + + KV+IG+SG Sbjct: 343 DVPSTQALPLQRKVARFPYVPSDPRQRDERCMEVYNIQVQALVQRLSSSKISKVVIGVSG 402 Query: 302 GIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVL 353 G+DS L A A+D LG + N+ +P TS ++L+ A K +GC + D+ Sbjct: 403 GLDSTHALLVCAKAMDRLGLPRSNILAYTMPGFATSDRTLQQARELMKLVGCTAREIDIR 462 Query: 354 PIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 P + L + + EP + EN+Q+ R N L L+NH+ A+++ T + SE++ Sbjct: 463 P--SCLAMLADLDHPYSRGEPVYDVTFENVQAGERTNHLFRLANHNHAIVIGTGDLSELA 520 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHG-ITSG-----LGPLTEVIPPSIL 465 +G+ T GD +N + KT + L W G + G L L I P ++ Sbjct: 521 LGWCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQVAEGGQDVLLAVLATDISPELV 580 Query: 466 EKSPSA---ELRPHQTDQESLPPYPILD 490 +A + P Q ++ + PY + D Sbjct: 581 PSGATAAGQDKAPEQKTEQIIGPYELQD 608 >gi|325290954|ref|YP_004267135.1| NH(3)-dependent NAD(+) synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324966355|gb|ADY57134.1| NH(3)-dependent NAD(+) synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 661 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 143/629 (22%), Positives = 267/629 (42%), Gaps = 103/629 (16%) Query: 2 LKKL---KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF 58 LKK+ ++ A +GD NI + + +A + + +++F EL ++GY DL Sbjct: 4 LKKMGFIRVGTAVPKVQIGDPMKNIEEISKLINQAAEEKVKVLVFPELCVTGYTCGDLFH 63 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 ++ + A++ L + + I VG P + N VIL G I+ K +P Sbjct: 64 QRLLLDKTEEALEKLVNTVIEIDMVIAVGLPILADNQLFNCAVILYKGEILGAVPKTFIP 123 Query: 119 NYSEFHEKRTFISGYS---------------NDPIVFRD----IRLGILICEDIWKNSNI 159 NY+EF+EKR F S + ++ ++FRD + +G+ +CED+W + Sbjct: 124 NYNEFYEKRWFSSAINRLSDRVILCGQEVPFHEQLLFRDSSSELCIGVEVCEDLWMTISP 183 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + + GA + +L+AS K + R +V+ Q + +YV+ GQ E D Sbjct: 184 SAYHAQYGANLILNLSASNEVVGKKEYRDALVSQQSAKCLAAYVYVS--AGQSESTTD-- 239 Query: 220 SFCFDGQQQLAFQMKHFSEQNF------MTEWHYDQQLSQWNYMSD------DSASTM-- 265 F GQ +A EQ F + ++ +++ M+ D T+ Sbjct: 240 -VVFGGQTLIAENGSILEEQRFQESVITFCDIDMEKLMNERRKMNSFMNRPPDLDYTIIN 298 Query: 266 --------------------------YIPLQEEEAD------YNACVLSLRDYVQKNNFH 293 ++P + E+ D + + L + K+ Sbjct: 299 FNLGKTERTEQETTENCLKRYVDPYPFVPGRREDRDIRCQEIFTIQLTGLAQRLVKSGIK 358 Query: 294 KVIIGLSGGIDSALCAAI---AVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K ++G+SGG+DS L + A D LG ++N+ + +P T+ ++ E+A + LG Sbjct: 359 KAVLGISGGLDSTLALLVCKEAFDKLGYPQDNIIGVTMPGFGTTNRTNENAKLLMRELGI 418 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 +PI + F+ + +P+ I EN+Q+R R ILM L+N +++ T Sbjct: 419 DVREIPITEACLQHFAAIGH----DPAIQDITYENVQARERTQILMDLANREGGIVVGTG 474 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW-----RNSHGITSGLGPLTEVIP 461 + SE+++G+ T GD + + KT V L SW +N+ + L I Sbjct: 475 DLSELALGWCTYNGDHMSNYAVNAGIPKTLVKYLVSWYADTSQNTKVTKTLQDILATPIS 534 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE----NEESFINNDQEYND----- 512 P +L + E+ Q +E + Y + D + ++ ++ F+ + + D Sbjct: 535 PELLPADRTGEI--EQKTEEKIGSYDLHDFFLYHMMRWGYSPKKIFLLAELAFQDKFDSS 592 Query: 513 ETVRYVE---HLLYGSEYKRRQAPVGTKI 538 E +R+++ + ++KR P G K+ Sbjct: 593 EILRWLKVFYQRFFSQQFKRSCLPDGPKV 621 >gi|298674040|ref|YP_003725790.1| NAD+ synthetase [Methanohalobium evestigatum Z-7303] gi|298287028|gb|ADI72994.1| NAD+ synthetase [Methanohalobium evestigatum Z-7303] Length = 263 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/266 (36%), Positives = 141/266 (53%), Gaps = 23/266 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK-YTSPQSLEDAAA 341 +R V++ + V+IGLSGGIDSA+ A +AV+ALG ENV I LP + TS + +D+ Sbjct: 14 IRSKVKEADSTGVVIGLSGGIDSAVTANLAVEALGSENVLGIHLPEEGVTSTKDSKDSEI 73 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A +LG + + I ++N F S + E+P V N++SRIR +L +N M Sbjct: 74 IANSLGINFKNIDISRILNCFISEIPDESGEKPP--VVGNLKSRIRMCLLYYYANSFYKM 131 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ T NKSEI +GY T YGD P+ DLYKT+VF+LA + IP Sbjct: 132 VVGTGNKSEIMLGYFTKYGDGGVDLEPIGDLYKTEVFELAKLLS--------------IP 177 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEH 520 I+ K PSA L QTD+ L PY I+D I+ + E+ N QE D T ++ Sbjct: 178 EHIINKKPSAGLWSGQTDENELGLPYEIIDRILNLVFHGEKP--ENLQEIFDLTPDQIDL 235 Query: 521 LLYGSE---YKRRQAPVGTKITAKSF 543 LL + +KR+ P+ A+ + Sbjct: 236 LLSRMKSNIHKRKVPPIAIVDAARHY 261 >gi|113866776|ref|YP_725265.1| NAD synthetase [Ralstonia eutropha H16] gi|113525552|emb|CAJ91897.1| NAD synthase [Ralstonia eutropha H16] Length = 682 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 144/562 (25%), Positives = 240/562 (42%), Gaps = 99/562 (17%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V D A N A+ +A ++G L+ F EL IS Y +DL +++ + AC +A+ T+ Sbjct: 25 VADPAFNAAETIALAAQAAQKGAVLVAFPELGISAYTCDDLFHQRALLDACEAALATIVE 84 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 + A ++VG P + + + N V++ G I V K LPNY EF+E R F + Sbjct: 85 ASRKLPAALIVGMPLRVEHQLFNCAVVVARGRIQGVVPKSYLPNYWEFYEARQFSAA--- 141 Query: 136 DPIVFRDIRL---------GIL--------------ICEDIWKNSNICKHLKKQGAEFLF 172 D IRL G+L ICED+W GA L Sbjct: 142 DNAAVESIRLLGQDVPFGAGLLFDVEDIPDFRFHAEICEDVWVPIPPSSFAALAGATVLV 201 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG-ASFCFDGQ--- 226 +L+AS K RH++V+ Q + +Y + G+ +L +DG A C +G+ Sbjct: 202 NLSASNIVVGKAGYRHQLVSQQSARCLAAYLYTSAGKGESSTDLAWDGQALICENGELLA 261 Query: 227 --------------------------QQLAFQ---MKHFSEQN--FMTEWHYDQQLSQWN 255 Q+ F +H +E + + + D L + Sbjct: 262 ESERFADTSHLLCADIDVERLSRERMHQVTFGHSVRRHKAEVDKFRVVRFPLDLTLEKSL 321 Query: 256 YMSDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA--- 306 ++ + A Y+P + D YN V +L + + KV+IG+SGG+DS Sbjct: 322 PLARNVARFPYVPADPRQRDERCMEVYNIQVQALVQRLSASKISKVVIGVSGGLDSTHAL 381 Query: 307 LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLP-----IH 356 L A A+D LG + N+ +P TS ++L A + +GC + D+ P + Sbjct: 382 LVCAKAMDRLGLPRANILAFTMPGFATSDRTLLQARQLMQVVGCTATEIDIRPSCLAMLK 441 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 DL + + + E+ + EN+Q+ R N L L+N A+++ T + SE+++G+ Sbjct: 442 DLGHPYAA------GEKVYDVTFENVQAGERTNHLFRLANFHHAIVIGTGDLSELALGWC 495 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL-- 473 T GD +N + KT + L W G G ++V+ ++L+ S EL Sbjct: 496 TYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQVGEGG--SDVL-LAVLDTDISPELVP 552 Query: 474 -----RPHQTDQESLPPYPILD 490 P Q + ++ PY + D Sbjct: 553 GDSNHGPEQKTESTIGPYELQD 574 >gi|293604903|ref|ZP_06687300.1| NAD synthetase [Achromobacter piechaudii ATCC 43553] gi|292816731|gb|EFF75815.1| NAD synthetase [Achromobacter piechaudii ATCC 43553] Length = 688 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 136/563 (24%), Positives = 241/563 (42%), Gaps = 80/563 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ + D A N + ++A + G L+ F EL +S Y +DL +K+ + Sbjct: 15 RVAVGVPECRIADPAFNATQTIELAQQAAQGGAVLVAFPELGLSAYTCDDLFHQKALLDE 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +A+ + T + G++VG P + + N V+ G ++ V K LPNY EF+E Sbjct: 75 CEAALARVVEATAELDIGVIVGAPLRVSHQLFNCAVVAAGGRVLGVVPKSYLPNYGEFYE 134 Query: 126 KRTF----ISGYSNDPIVFRDIRLG----------------ILICEDIWKNSNICKHLKK 165 R F + ++ ++ + + G + ICED+W Sbjct: 135 ARQFSAADCAAVTDIALLGQTVPFGPELLFQMEKLPLFQFHVEICEDVWVPIPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K + RH++V Q + +Y + G+ +L +DG + + Sbjct: 195 AGATVLVNLSASNIVVGKSQYRHQLVAQQSARCLSAYMYTSAGRGESSTDLAWDGQAIIY 254 Query: 224 D-----GQQQLAFQMKH--FSEQNF-------MTEWHYDQQLSQ--------------WN 255 + G+ + H FS+ + M + + Q + + N Sbjct: 255 ENGELLGESERFLNHSHLLFSDVDLDRLSRERMRQTTFGQSVRRHQDEVRKFRSVPVPVN 314 Query: 256 YMSDDS--------ASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSG 301 DD+ A Y+P + D Y+ V +L + + KV+IG+SG Sbjct: 315 PPLDDAELALERRVARFPYVPADPRQRDARCKEVYSIQVQALAQRLSASKMSKVVIGISG 374 Query: 302 GIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVL 353 G+DS L A A+D LG + N+ + +P TS ++L+ A +GC + D+ Sbjct: 375 GLDSTHALLVCAQAMDTLGLPRSNILAVTMPGFATSTRTLQQARRLMAVVGCTASEVDIR 434 Query: 354 PIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 P + L + EP I EN+Q+ R N L ++N S A+++ T + SE++ Sbjct: 435 P--SCLQMLKDLGHPYAHGEPVYDITFENVQAGERTNHLFRIANFSNAIVIGTGDLSELA 492 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS--GLGPLTEVIPPSIL-EKS 468 +G+ T GD ++ + KT + L W G G L +V+ + E Sbjct: 493 LGWCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESGRLGEDGAAVLLDVLGTDVSPELV 552 Query: 469 P-SAELRPHQTDQESLPPYPILD 490 P A+ +P Q ++S+ PY + D Sbjct: 553 PGGADDKPVQKSEDSIGPYELQD 575 >gi|168186390|ref|ZP_02621025.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum C str. Eklund] gi|169295535|gb|EDS77668.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum C str. Eklund] Length = 637 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 145/617 (23%), Positives = 254/617 (41%), Gaps = 94/617 (15%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I +A PVV GD+ NI ++ + A + L+LF EL I+ Y DL ++ I+ Sbjct: 4 IRVASACPVVNVGDVKFNIQNIKKCIDLALNENSKLVLFPELSITSYTCADLFLNQTLIE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + I VG P + N I+ G I+ + K LPNYSEF+ Sbjct: 64 KSMEGIKDICDFSLHKDILIAVGAPLLFNYSLYNCTYIIYNGKILGIVPKSYLPNYSEFY 123 Query: 125 EKRTFISG-----------YSNDP-----IVFR--DIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G + ND ++F + + ICED+W +L Sbjct: 124 EKRWFTEGHDIISEKVNLPFQNDVPFGINLLFTSGNFKFAFEICEDLWTVIPPSSYLALM 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R+ +V+ Q + +Y + +++F G + Sbjct: 184 GANIIGNLSASNELVSKADYRNFVVSSQSARCMSSYVYASSGVFESTTDVVFSGHLMIAE 243 Query: 225 GQQQLA-----------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS 261 + L +MK+ S ++ + +N+ + Sbjct: 244 NGKILKSNNRFQRENEVITSIIDVDKINNMRMKNLSFRDSKRACPFKPLEISFNFKDTNI 303 Query: 262 AST-------MYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++P E E + +N L + KVI+G+SGG+DS L Sbjct: 304 GNFDRKINKHPFVPSNEHEREARSKEIFNIQSAGLAKRLNHTGLKKVIVGISGGLDSTLA 363 Query: 309 AAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY-DVLPIHDLVNHF 362 +AV+ L ++N+ TI +P T+ ++ +A K LG + ++ ++ + HF Sbjct: 364 LLVAVNTFDLLKLPRKNIITITMPGFGTTDRTYNNAVDLCKKLGTDFREINIVNSCLQHF 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + E + EN+Q+R R ILM L+N A+L+ T + SEI++G+ T GD Sbjct: 424 KDIGHP---AEIHDVTYENVQARERTQILMDLANKEAALLVGTGDLSEIALGWATYNGDH 480 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD--- 479 ++ + KT V L + H + I IL+ S EL P D Sbjct: 481 MSMYSVNCSIPKTLVRYLVKFSAEHNSEKNISH----ILMDILDTPVSPELLPKDKDGKI 536 Query: 480 ----QESLPPYPILDDIIKRIVENEESF----------INNDQEYNDETV-RYVEHLL-- 522 ++ + PY + D + + +F ND Y++ET+ ++++ + Sbjct: 537 TQKTEDIVGPYELHDFFLYYFMRQNATFEKILYLAKEAFKND--YDEETIKKWLDKFMRR 594 Query: 523 -YGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 595 FFTQQFKRSAIPDGPKV 611 >gi|227494858|ref|ZP_03925174.1| NAD(+) synthase (glutamine-hydrolyzing) [Actinomyces coleocanis DSM 15436] gi|226831310|gb|EEH63693.1| NAD(+) synthase (glutamine-hydrolyzing) [Actinomyces coleocanis DSM 15436] Length = 683 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 133/563 (23%), Positives = 242/563 (42%), Gaps = 87/563 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D A N + A EA+ QG L++F EL ++GY EDL Sbjct: 13 RVAAVTLPVALADPATNARRIIEAATEAHNQGCSLVVFPELSLTGYTAEDLFLSDVMYDE 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ +K + + I+VG P + + N+ + + G+ +AV+ K+++PNY EF+E Sbjct: 73 VIKALQEIKEASKELTPLILVGSPLRHAANLYNTAIAIHKGHFLAVKPKLHIPNYGEFYE 132 Query: 126 KRTF------------------ISGYSNDPIVFRDIRLGIL---ICEDIWKNSNICKHLK 164 R F + G++ + D+ ++ ICE++W S + Sbjct: 133 VRWFAQISAWQVPAEFKIGKDVVPGFACPALQATDLPAFVVAPEICEELWVTSPVSADAS 192 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ--DELIFDGASFC 222 GA + +L++SP + + R + IY + G+ ++L +DG + Sbjct: 193 ACGATIIANLSSSPVTVGRARDRRLMCQSASHRGACAYIYTSSGEGESTNDLAWDGQALI 252 Query: 223 FDG----------------------------QQQLAFQMKHFSEQNFM----------TE 244 ++ QQQ H S ++ T+ Sbjct: 253 YEAGDLVKENQRFHRGLQLTIADIDLDRLRHQQQRMNTFTHVSAEDTQVIEFELNPPHTD 312 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFH-KVIIGLSG 301 +Q+ ++ Y+ D A+ + E+ EA YN V SL ++ + K ++G+SG Sbjct: 313 LGLQRQIQRFPYVPSDPAT-----MDEDCFEA-YNIQVSSLMRRLESIGPNVKPVLGVSG 366 Query: 302 GIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L A+D LG +E + T +P T+ + +A A ++ALG ++ L I Sbjct: 367 GLDSTQALLVCVEAMDRLGRPREYILTFTMPGFATTEHTRSNAQALSEALGTTFETLDIR 426 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 M EE + EN+Q+ +R + L ++N +++ T + SE+++G Sbjct: 427 PAATQMLKEMGHPFGRGEEVYDVTFENVQAGLRTDFLFRIANARGGIVIGTGDLSELALG 486 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD ++ + KT + L W S G + P+ +++ SIL+ + EL Sbjct: 487 WCTYGVGDHMSHYSVNPGVPKTLMQHLVRWVVSSGKFN--EPVNDIL-NSILDTEITPEL 543 Query: 474 RP------HQTDQESLPPYPILD 490 P Q+ Q S+ PY + D Sbjct: 544 IPLKAGEEPQSTQSSIGPYSLHD 566 >gi|261417135|ref|YP_003250818.1| NAD+ synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373591|gb|ACX76336.1| NAD+ synthetase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 491 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/331 (31%), Positives = 166/331 (50%), Gaps = 37/331 (11%) Query: 187 RHEIVTGQISHVH----LPIIYVNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFSE 238 R E+ ++SH+ +P++ +N VG G++ G S FD ++ F+M FSE Sbjct: 97 RREVENKELSHLAQDCAMPVVCLNGVGTDNTGKNIYALSGGSRVFDCDGKIVFEMPLFSE 156 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVII 297 + E+ D Q+ + S P E A+ ++A V +R+ ++ + +++I Sbjct: 157 AEAVIEF-VDGQVQVYAESSK--------PYTNEIAEIHDALVFMIRENLKMFHISRMVI 207 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 G SGGIDSA+ AA+ +A+G ENV + +P ++ S + A A+ LG Y V PI D Sbjct: 208 GASGGIDSAVSAALYAEAIGPENVYLVNMPTRFNSDTTKNAARDLAENLGTPYMVAPISD 267 Query: 358 LVNHFFSLMSQ--FLQEEP----SGIVAENIQSRIR-GNILMALSNHSKAMLLTTSNKSE 410 ++ + + F++ + +GI EN+Q+R R +IL +++ A + NKSE Sbjct: 268 IIESVCHTLERCSFVRNDTVMKIAGINHENLQARTRSASILSTVASVVGAGVTCNGNKSE 327 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 VGY TLYGD G L DL+KTQV++LA + N E+IP + ++ S Sbjct: 328 AMVGYCTLYGDTCGVMCALGDLWKTQVYELARYINRD---------KEIIPKASIDIPAS 378 Query: 471 AELR-PHQTDQESLPP--YPILDDIIKRIVE 498 AEL D+ P YP D + VE Sbjct: 379 AELSDAMNVDEGKGDPILYPYHDKLFAMWVE 409 >gi|182626233|ref|ZP_02953991.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens D str. JGS1721] gi|177908497|gb|EDT71030.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens D str. JGS1721] Length = 635 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 141/625 (22%), Positives = 267/625 (42%), Gaps = 98/625 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ A + D N+ + A + + +++F EL IS Y DL + I+ Sbjct: 4 IKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNEKLIE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C+ AI L + + VG P + + N ++ G ++ + K +PNYSEF+ Sbjct: 64 NCNLAIKNLVEFSKGKDILMAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGYS-----------------NDPIV-FRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G++ D I F+++++G ICED+W +L Sbjct: 124 EKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNLALI 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDGAS--- 220 GA + +L+AS +K R +V Q + IY + G + +L+F G Sbjct: 184 GANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIY-SSAGVHESTTDLLFSGHMIIA 242 Query: 221 -------------------------FCFDGQ--QQLAFQMKHFSEQN------FMTE--- 244 F D + + ++F+ F+E N F E Sbjct: 243 ENGTIIKENNRFKRENDLLTGIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLENTE 302 Query: 245 -WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++D+++ + ++ + Y E N +L ++ N K +IG+SGG+ Sbjct: 303 IKNFDREIDKHPFL----PKSQYAMEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGL 358 Query: 304 DSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + V + +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 359 DSTLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNA 418 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T Sbjct: 419 ALQHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTY 476 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEVIPPSILEKSPSAEL 473 GD ++ + KT V L ++ +H I++ L L + P +L K ++ Sbjct: 477 NGDHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEALLDILDTPVSPELLPKDKEGKI 536 Query: 474 RPHQTDQESLPPYPILDDIIKRIVEN-----------EESFINNDQEYNDETV-RYVEHL 521 Q ++ + PY + D + +++ +E+F N +Y++ET+ ++++ Sbjct: 537 A--QKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKN---DYDEETLKKWLDKF 591 Query: 522 L---YGSEYKRRQAPVGTKITAKSF 543 + + ++KR P G K+ + S Sbjct: 592 IRRFFTQQFKRSALPDGPKVGSISL 616 >gi|194288870|ref|YP_002004777.1| nad synthetase [Cupriavidus taiwanensis LMG 19424] gi|193222705|emb|CAQ68708.1| Glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) [Cupriavidus taiwanensis LMG 19424] Length = 708 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 141/559 (25%), Positives = 237/559 (42%), Gaps = 93/559 (16%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V D A N + +A ++G L+ F EL +S Y +DL +++ + AC +A+ T+ Sbjct: 51 VADPAFNANETIALATQAAQRGAVLVAFPELGLSAYTCDDLFHQRALLDACQAALATIVE 110 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFI----- 130 + +VVG P + + + N V++ G I V K LPNY EF+E R F Sbjct: 111 ASRKLPVALVVGMPLRVEHQLFNCAVVVARGRIQGVVPKTYLPNYWEFYEARQFSAADNA 170 Query: 131 ---------------SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +G D D R ICED+W GA L +L+ Sbjct: 171 AVDSIELLGQQVPFGAGLLFDIEDIPDFRFHAEICEDVWVPIPPSSFAALAGATVLVNLS 230 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG-ASFCFDGQ------ 226 AS K RH++V+ Q + +Y + G+ +L +DG A C +G+ Sbjct: 231 ASNIVVGKSGYRHQLVSQQSARCLAAYLYTSAGKGESSTDLAWDGQALICENGELLAESE 290 Query: 227 -----------------------QQLAFQ---MKHFSE--QNFMTEWHYDQQLSQWNYMS 258 Q+ F +H +E Q + + D L + + Sbjct: 291 RFADTSHLLFADIDVERLSRERMHQVTFGHSVRRHKAEVDQFRVVRFPLDLTLEKSLPLE 350 Query: 259 DDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCA 309 + A Y+P + D YN V +L + + KV+IG+SGG+DS L Sbjct: 351 RNVARFPYVPADPRQRDERCMEVYNIQVQALVQRLSASKISKVVIGVSGGLDSTHALLVC 410 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLP-----IHDLV 359 A A+D LG + N+ +P TS ++L+ A + +GC + D+ P + DL Sbjct: 411 AKAMDRLGLPRANILAYTMPGFATSGRTLQQARQLMQVVGCTATEIDIRPSCLAMLKDLG 470 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL- 418 + + + E+ + EN+Q+ R N L L+N++ A+++ T + SE+++G+ T Sbjct: 471 HPYAA------GEKVYDVTFENVQAGERTNHLFRLANYNHAIVIGTGDLSELALGWCTYG 524 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL----- 473 GD +N + KT + L W G G ++V+ ++L+ S EL Sbjct: 525 VGDHMSHYNVNASVPKTLISHLVRWVAETGQVGAGG--SDVL-LAVLDTDISPELVPGDS 581 Query: 474 --RPHQTDQESLPPYPILD 490 P Q + ++ PY + D Sbjct: 582 NHGPEQKTESTIGPYELQD 600 >gi|304437340|ref|ZP_07397299.1| NAD synthetase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369596|gb|EFM23262.1| NAD synthetase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 555 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 142/528 (26%), Positives = 230/528 (43%), Gaps = 75/528 (14%) Query: 5 LKIAIAQLNPVVGDIAGN-IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +KIA+ + + G N +A A R RE + +L LF L +SG + + SF+ Sbjct: 1 MKIALISMEIIPGRPDLNAVAMAERIREAKDAHA-ELALFPALSLSGLFLGSVWKQPSFV 59 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + C++ + + + GI V F GN+ A + + + Sbjct: 60 RDCTAYAEEIAAAAD----GITVIF-----------------GNVAAGGEGCCGLSRTLL 98 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 H + + + P+ R L+ E G + + +ASP+ Sbjct: 99 HARDGVLREVARRPLHGAGTRFSPLLYE-------------LPGEHVILAADASPF-PLC 144 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 + R T Q L +YVN +G QD+ + F G Q AF+ + +T Sbjct: 145 FEARTLAKTAQEQRAVL--LYVNTLGLQDK---GKTVYTFAGSAQ-AFRAD--GARALIT 196 Query: 244 EWHYDQ----QLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + D + +D A P+ Y ++R ++ + +V+IG+ Sbjct: 197 PAYKDGVTIVDTAVLPAPADRPAEPAIAPI------YRTLRYAVRKFLARIYMKRVVIGI 250 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ AA+ VDA+G ENV + +P K+ S + AA AK LGC++ ++PI + + Sbjct: 251 SGGIDSAVSAALYVDAIGAENVLLVNMPSKFNSATTKGLAAQLAKNLGCRHMIVPIEESI 310 Query: 360 NHFFSLMSQFLQEEP----------SGIVAENIQSRIR-GNILMALSNHSKAMLLTTSNK 408 ++ +S+ E S V EN+Q+R R G +L ++ A NK Sbjct: 311 SYTAKQLSEIPIEGAAAAPGEHLTISSFVRENMQARNRSGRVLGTIAAAWGAGFTCNGNK 370 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 +E +VGY TLYGD++G L DL+K QV+ LA + N H E IP SI++ Sbjct: 371 AETTVGYATLYGDLAGFLCALADLWKYQVYDLARYLNEHVYGR------ETIPQSIIDIV 424 Query: 469 PSAELRPHQ-TDQESLPP--YPILDDIIKRIVENEESFINNDQEYNDE 513 PSAEL Q D+ P YP D + + VE + + + Y D+ Sbjct: 425 PSAELSDAQNVDEGKGDPIHYPYHDYLFRAFVEADRNPEDILTHYADD 472 >gi|329847616|ref|ZP_08262644.1| putative glutamine-dependent NAD+ synthetase [Asticcacaulis biprosthecum C19] gi|328842679|gb|EGF92248.1| putative glutamine-dependent NAD+ synthetase [Asticcacaulis biprosthecum C19] Length = 654 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 152/618 (24%), Positives = 254/618 (41%), Gaps = 96/618 (15%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A + P V GD N+ + E A G D++++ EL +S Y +DL ++ + Sbjct: 14 VRVACVTPKVHLGDPMANLTEHLSLAERAGAAGADIVVYPELSLSAYSLDDLFTQEVLLD 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L + +VVG P + + N ++ G + + K LPNY E++ Sbjct: 74 AVKEALAALIFFSTKIRPVLVVGLPLRVDGALYNCAAVIANGKALGIVPKSYLPNYREYY 133 Query: 125 EKRTFISGYSN-----DPIVF----------RDIRLGILICEDIWKNSNICKHLKKQGAE 169 E+R F SG D ++F G+ ICED+W + L GA Sbjct: 134 ERRYFASGAGVVNRLVDGVLFGTKQVFAAGGSAFTFGVEICEDLWVPNTPATPLAVAGAN 193 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD--- 224 + +L+ASP K + R + + Y G+ +L +DG S ++ Sbjct: 194 LIVNLSASPVVIGKSRARKRLCAAASERLFCAYAYSAAGPGESTTDLAWDGQSLVYELGN 253 Query: 225 -----------------------GQQQLAFQMKHFSEQNFMTE-------WH------YD 248 ++L H S Q F T+ W + Sbjct: 254 LIAEGERFTSDSLMLADVDLERVAAERLKTGTFHDSGQGFATDVARTGFDWKPHELTDFH 313 Query: 249 QQLSQWNYMSDDSASTMYIPLQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 +Q++++ Y+ DD++ L E+ EA +N V L V V+IG+SGG+DS Sbjct: 314 RQVARFPYVPDDASR-----LDEDCYEA-FNIQVHGLMQRVSSTGSQNVVIGVSGGLDST 367 Query: 307 ---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 + A A D LG + N+ +P TS S DA KALG + L I Sbjct: 368 HALIVACKAFDRLGIPRANIHGYTMPGFGTSTGSKNDALKLMKALGISAEELDIRPAAKR 427 Query: 362 FF-SLMSQFLQ-EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL- 418 + + Q E+ IV EN+Q+ +R + L L+ K ++ T + SE+++G+ T Sbjct: 428 MLMDIGHPYAQGEKVYDIVFENVQAGLRTDFLFRLAGIKKGFVVGTGDLSELALGWCTYG 487 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 GD +N KT + L W + + G I S+L + S EL P + Sbjct: 488 VGDHMSHYNVNCGAPKTLIQHLIRWAANREFDAKTGR----ILTSVLTREISPELIPIEA 543 Query: 479 DQ-----ESLPPYPILDDIIKRIVE-----NEESFINND---QEYNDETVR-YVEHLLYG 524 Q + + PY + D + I ++ +F++ +Y +R ++E LY Sbjct: 544 GQIQRTEDKVGPYELQDFNLYYITRFGLKPSKVAFLSYQAWKDKYELRVIRQWLEVFLYR 603 Query: 525 ----SEYKRRQAPVGTKI 538 S++KR P G K+ Sbjct: 604 FFTISQFKRSAVPNGPKL 621 >gi|330859231|emb|CBX69581.1| hypothetical protein YEW_DZ17160 [Yersinia enterocolitica W22703] Length = 170 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 10/177 (5%) Query: 140 FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVH 199 + RLG+LICED+W + + +K AE + S+NASPY K R ++ Sbjct: 3 LKGYRLGLLICEDLWFDGPV-DAVKAARAEIVLSINASPYNREKPYIRKTLMAAHCQRTG 61 Query: 200 LPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD 259 LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ + Q ++ + Sbjct: 62 LPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQTTLL------QFNECEVVPM 115 Query: 260 DSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 + + PL + Y A VL++RDYV KN F+ ++GLSGGIDSAL AIAVD++ Sbjct: 116 MAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLSGGIDSALTLAIAVDSI 169 >gi|302325452|gb|ADL24653.1| NAD+ synthetase, glutamine-dependent [Fibrobacter succinogenes subsp. succinogenes S85] Length = 518 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/331 (31%), Positives = 166/331 (50%), Gaps = 37/331 (11%) Query: 187 RHEIVTGQISHVH----LPIIYVNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFSE 238 R E+ ++SH+ +P++ +N VG G++ G S FD ++ F+M FSE Sbjct: 124 RREVENKELSHLAQDCAMPVVCLNGVGTDNTGKNIYALSGGSRVFDCDGKIVFEMPLFSE 183 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSLRDYVQKNNFHKVII 297 + E+ D Q+ + S P E A+ ++A V +R+ ++ + +++I Sbjct: 184 AEAVIEF-VDGQVQVYAESSK--------PYTNEIAEIHDALVFMIRENLKMFHISRMVI 234 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 G SGGIDSA+ AA+ +A+G ENV + +P ++ S + A A+ LG Y V PI D Sbjct: 235 GASGGIDSAVSAALYAEAIGPENVYLVNMPTRFNSDTTKNAARDLAENLGTPYMVAPISD 294 Query: 358 LVNHFFSLMSQ--FLQEEP----SGIVAENIQSRIR-GNILMALSNHSKAMLLTTSNKSE 410 ++ + + F++ + +GI EN+Q+R R +IL +++ A + NKSE Sbjct: 295 IIESVCHTLERCSFVRNDTVMKIAGINHENLQARTRSASILSTVASVVGAGVTCNGNKSE 354 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 VGY TLYGD G L DL+KTQV++LA + N E+IP + ++ S Sbjct: 355 AMVGYCTLYGDTCGVMCALGDLWKTQVYELARYINRD---------KEIIPKASIDIPAS 405 Query: 471 AELR-PHQTDQESLPP--YPILDDIIKRIVE 498 AEL D+ P YP D + VE Sbjct: 406 AELSDAMNVDEGKGDPILYPYHDKLFAMWVE 436 >gi|189500742|ref|YP_001960212.1| NAD synthetase [Chlorobium phaeobacteroides BS1] gi|238692258|sp|B3ELE3|NADE_CHLPB RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189496183|gb|ACE04731.1| NAD+ synthetase [Chlorobium phaeobacteroides BS1] Length = 277 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/280 (32%), Positives = 146/280 (52%), Gaps = 44/280 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ ++K F + GLSGGIDSA+ +A ALG ENV +++PY+ +SP+S+ DA Sbjct: 21 IRNEIRKFGFRSAVFGLSGGIDSAVVCELAKRALGPENVLAVLMPYRTSSPESVNDARLM 80 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + G + + + I +V+ FF +S + N+ +R R L +S ++ Sbjct: 81 VEKTGVRSEEVEITGVVDAFFDGVSG-----AGNLRMGNVMARARMLYLYDISARDGRLV 135 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+E+ +GYGTL+GDM+ NP+ DLYKTQ++ LA R+ IP Sbjct: 136 IGTSNKTELLLGYGTLFGDMASAVNPIGDLYKTQLWGLA--RHLQ------------IPE 181 Query: 463 SILEKSPSAELRPHQTDQESLP---------PYPILDDIIKR--IVEN--EESFINNDQE 509 ++ K PSA+L Q+D+ L Y +L+ + R I+E EESF + Sbjct: 182 ELVSKIPSADLWEGQSDEADLGFGYGEVDLLLYMMLEKRMSRSDIIEAGIEESFYDK--- 238 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 V ++ ++YK R PV KI+A++ G D Y Sbjct: 239 --------VRKMVVRNQYK-RMMPVIAKISARTPGIDFRY 269 >gi|189485551|ref|YP_001956492.1| NAD+ synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287510|dbj|BAG14031.1| NAD+ synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 630 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 146/623 (23%), Positives = 274/623 (43%), Gaps = 104/623 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A A + V + + N+A+ + E+AN G++L++F EL ++GY +L + Sbjct: 6 IKTAAATPHISVANPSVNVAEIIKLIEQANACGVELLVFPELCVTGYTCGELFLSDVLMH 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + S A++ + T A + VG P ++ + + V G ++ V K LP+YSEF+ Sbjct: 66 SVSDALNMVCKTTVGEKALVFVGSPIWNEGKLYSCAVAFQNGKVLGVVPKTALPSYSEFY 125 Query: 125 EKRTFISG---------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 E R F+SG + D I+F +++ ICED++ S Sbjct: 126 ELRHFVSGRDISGSIKLCRQTAPFGTD-IIFAAKNNDTVKIAAEICEDMFIISPPSNRHV 184 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA--- 219 + GA + +L+AS K+ R ++ Q + +Y + G+ ++IF G Sbjct: 185 QAGASVIVNLSASNELIGKVDYRKTLIKSQSGRLSAGYVYASAGSGESVSDIIFSGVRII 244 Query: 220 -----------------SFCFDGQQQLAFQMKH------FSEQNFMT-EWHYDQ------ 249 + C Q+LA++ + ++ + T E+++D+ Sbjct: 245 AESGEILAEGGLFESGLTLCEIDTQRLAYERRRLNVFESYNSSGYRTVEFNFDETGTELM 304 Query: 250 -QLSQWNYMSDD-----SASTMYIPLQEEEADYNACVLSLRDYVQKNNF--HKVIIGLSG 301 +SQ ++ +D S + + + +Q R ++ F ++G+SG Sbjct: 305 RHISQLPFVPEDLKSVSSRAELILQMQS------------RALAERLKFTGSNAVLGISG 352 Query: 302 GIDSALCAAIAV----DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 G+DS L A +AV + LG K+++ + +P TS +++E + A+ALG + +PI Sbjct: 353 GLDSCL-ALLAVVRSYEILGRSKKDIIAVTMPGPGTSLKTVESVSELAEALGIQIRKIPI 411 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 D+V + + +E+ V EN Q+R R ILM ++N + +++ T + SE ++G+ Sbjct: 412 TDIVRKHLTDIKHSGKEDT---VYENAQARERTQILMDIANAEEGLVIGTGDLSENALGW 468 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI---TSGLGPLTEVIPPSILEKSPSAE 472 T GD + + KT V L S+ + + + L L I P +L PS Sbjct: 469 CTYNGDHMSMYAVNSSVPKTLVKHLVSYESERVVKYKKALLSILNTEISPELL---PSDN 525 Query: 473 LRPHQTDQESLPPYPILDDII-----------KRIVENEESFINN-DQEYNDETVRYVEH 520 + Q ++ + PY + D + K ++ ++F D E + +R Sbjct: 526 GKISQKTEDIIGPYELHDFFLYYTVRFGQKPDKTLMLALKAFKGKYDIEEIKKYLRVFIE 585 Query: 521 LLYGSEYKRRQAPVGTKITAKSF 543 + S++KR P G KI S Sbjct: 586 RFFASQFKRNCVPDGIKIGTISL 608 >gi|154495845|ref|ZP_02034541.1| hypothetical protein BACCAP_00125 [Bacteroides capillosus ATCC 29799] gi|150275043|gb|EDN02091.1| hypothetical protein BACCAP_00125 [Bacteroides capillosus ATCC 29799] Length = 641 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 140/615 (22%), Positives = 247/615 (40%), Gaps = 90/615 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A V D N EA +QG+ +++ EL ++GY DL + +Q Sbjct: 6 IKVAAGTPEIRVADCRHNAEACFTLMREAAKQGVKVLVLPELCLTGYTCGDLFLNDTLLQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A+ T+ T + +G P +++ + N ++ G I+ + K LPNY E Sbjct: 66 GAEDALATVLEATRNLDMITALGLPVRNKWDNKLYNCAAVIHKGTILGLVPKTALPNYGE 125 Query: 123 FHEKRTFISGYSND---PIVFRDIRL----------------GILICEDIWKNSNICKHL 163 F+E R F SG + P+ +D+ L G+ ICED+W L Sbjct: 126 FYEGRWFASGQGVECYIPLCGQDVDLCARQLFGCTTMPNLVIGVEICEDLWGTQPPSGLL 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 GA + +L+AS K + R +VTGQ + + +Y + G+ E D F Sbjct: 186 AAAGATVMLNLSASDEVVGKAEYRRALVTGQSARLVCGYVYAD--AGEGESTTD---MVF 240 Query: 224 DGQQQLAFQMKHFSEQNF-----MTEWHYDQQLSQWNYMSDDSAS--------------- 263 G +A E+ F ++E D+ + + M+ +AS Sbjct: 241 TGHNLIAENGALLGERRFACGLTVSEIDVDRLVYERRRMNTYAASKDAMEIGRVNFDLER 300 Query: 264 -----------TMYIPL----QEEEAD--YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 T ++P + E D L L+ ++ + ++GLSGG+DS Sbjct: 301 EETHLTRRFSPTPFVPEDSTDRAERCDEILKIAALGLKRRLEHTHASAAVVGLSGGLDST 360 Query: 307 LC---AAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L AA+A+ L + ++ + +P T+ ++ ++A A LG + I + V Sbjct: 361 LAILIAAVAMKLLDRPASDIIAVTMPCFGTTDRTRDNAVELAGRLGATLKRIDIGEAVKQ 420 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + Q + + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 421 HFKDIGQSMDNHD--VTFENGQARERTQVLMDIANQCGGLVVGTGDLSELALGWATYNGD 478 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V L ++ + P + IL+ S EL P Sbjct: 479 HMSMYGVNASIPKTLVRHLVAFVAGDKVAE--DPRLSHVLEDILDTPVSPELLPAVGGEI 536 Query: 476 HQTDQESLPPYPILDDIIKRIVE----NEESFINNDQEYNDETVRYV--------EHLLY 523 Q ++ + PY + D + I+ + F +Q D R V + Sbjct: 537 AQRTEDLVGPYELHDFFLYYIIRWGFPPRKVFRLAEQALGDRYDRAVILKWLKNFYRRFF 596 Query: 524 GSEYKRRQAPVGTKI 538 ++KR P G K+ Sbjct: 597 AQQFKRSCLPDGPKV 611 >gi|284005680|ref|YP_003391500.1| NAD+ synthetase [Spirosoma linguale DSM 74] gi|283820864|gb|ADB42701.1| NAD+ synthetase [Spirosoma linguale DSM 74] Length = 688 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 163/653 (24%), Positives = 265/653 (40%), Gaps = 121/653 (18%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K LK+A LN N A A Q + L+ EL ISGY ED + ++ Sbjct: 1 MKLLKVAAGALNQTPLHWEHNTQNIINAIAAARAQQISLLCLPELCISGYGCEDAFYAQN 60 Query: 62 FI-QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I QA S +D + H + VG P + +N+ ++ I+ K +LPN Sbjct: 61 TIDQAIRSLLDIVP---HTADILVSVGLPMRHGNRTINTACLMSNRRILGFVGKQHLPND 117 Query: 121 SEFHEKR-------------TFISGYSNDPI---VFR--DIRLGILICEDIWKNSNICKH 162 +E+R T + G + PI +F IR+G IC+D W + Sbjct: 118 GIHYEERWFQPWPAGVRDELTLLDGATVYPIGDLLFEISGIRIGFEICQDAWIAGRPGRS 177 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASF 221 L +G + + + +AS + K + R +V + IY N +G + +I+DG + Sbjct: 178 LYDRGVDIILNPSASHFAFFKSEVRERLVVDASRAFGVSYIYTNLLGNEAGRVIYDGDAM 237 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSDDSASTMYIPLQ-------- 270 L + E + D +LSQ S + + MY L+ Sbjct: 238 VASNGVLLVSGARLSYEDFVLVSAVVDVEQTRLSQ--VQSRGTLTRMYPELRVIERFDWP 295 Query: 271 --------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 +EE A L L DY++K+ ++ LSGG DS+ AA Sbjct: 296 RVGPVVQQAELEAWEKGGYLKEEEFARAVALGLFDYLRKSRSQGYVLSLSGGADSSAIAA 355 Query: 311 -------IAVDALGKENV---------------------QTIMLPYKYT---SPQSLEDA 339 +AV+ +G E V Q + + Y+ T S + A Sbjct: 356 TVYLMIRMAVETIGLEGVKKKLAYIRAIQDCTTPEAMIGQLLTVMYQGTENSSDDTFNSA 415 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSL----MSQFLQEEPSGIVAENIQSRIRGNILMALS 395 A +G + + I+ LV + L + + L E I +NIQ+R+R + ++ Sbjct: 416 KQLADDIGATFLRININGLVETYRGLVEEQLGRVLSWETDDIALQNIQARVRAPGIWLIA 475 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI------ 449 N A+LL+TSN+SE +VGY T+ GD +G +P+ + K + W + G+ Sbjct: 476 NLKNALLLSTSNRSEAAVGYATMDGDTAGSISPITGIDKHFLRGWLRWLETVGLNVKNQT 535 Query: 450 ------TSGLGPL--TEVIPPSILEK----SPSAELRP---HQTDQESLPPYPILDDIIK 494 + G GP+ E+I L P+AELRP QTD++ L PY +L+ I Sbjct: 536 IPTDRTSQGPGPVGADELIRVKGLHAVNNLQPTAELRPLDKKQTDEDDLMPYDVLNSI-- 593 Query: 495 RIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDR 547 E + I + Q D V + + Y Y+R + V + K + R++ Sbjct: 594 -----ENAAIRDKQAPLD--VLLLLEIRYADRYERAKLAVWVERFFKLWSRNQ 639 >gi|307720816|ref|YP_003891956.1| NH(3)-dependent NAD(+) synthetase [Sulfurimonas autotrophica DSM 16294] gi|306978909|gb|ADN08944.1| NH(3)-dependent NAD(+) synthetase [Sulfurimonas autotrophica DSM 16294] Length = 268 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 87/277 (31%), Positives = 148/277 (53%), Gaps = 31/277 (11%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 L L + V+K KV++GLSGG+DSA+ A +A A G +++ + +P +Y+S SL+DA Sbjct: 12 TLFLDNEVKKTGITKVVLGLSGGLDSAVVAVLAHKAFG-DDLLCVKMPSQYSSQSSLDDA 70 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + G K + ++ + + + + + N +R+R L +S Sbjct: 71 DELCRDFGLKAITCSVESMLRAY-----EEMNPDLDNLRKGNFSARMRMATLFDISAREN 125 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 A++L TSNKSE+ +GYGTLYGD++ NP+ DLYK++VF+LA + Sbjct: 126 ALVLGTSNKSELMLGYGTLYGDLASAINPIGDLYKSEVFELARYLE-------------- 171 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINN--DQEYNDE 513 + SI+EK PSA+L Q+D+ L Y LD+ +K V+ + E I D++ D Sbjct: 172 VSKSIIEKPPSADLWSGQSDEADLGYTYSQLDEAMKLYVDERLSREEVIAKGVDEKMLDM 231 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 ++ + + +++KR+ PV K+T+++ D YP Sbjct: 232 IIKRI----FRNQFKRKM-PVIAKLTSRTLNHDFNYP 263 >gi|187934473|ref|YP_001885287.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum B str. Eklund 17B] gi|187722626|gb|ACD23847.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum B str. Eklund 17B] Length = 632 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 144/620 (23%), Positives = 253/620 (40%), Gaps = 88/620 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A VGDI NI+ + ++A I+F EL I+ Y DL + + Sbjct: 4 IKVASACPKTKVGDIDYNISNILKCIDDAKNNNSKFIVFPELCITSYTCGDLFLNDTLLN 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + I+ + + T D I +G P + N +L G I+ + K +PNYSEF+ Sbjct: 64 KSITGINQILNATEDCDMLIALGAPLLINNVLYNCAYLLFKGKILGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F G S N P ++F G+ ICED+W +L Sbjct: 124 EKRWFTEGLSLETQEIDLPIQKNVPFGANLIFSSQIANFGVEICEDLWVTIPPSSYLSLL 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQV--GGQDELIFDGASF--- 221 GA + +L+AS +K R +V+ Q + IY + +L+F G Sbjct: 184 GAHIIGNLSASNELVSKKDYRKSLVSNQSARCLCSYIYASAGVHESSTDLLFSGHLMISE 243 Query: 222 --------------------CFDGQQQLAFQMKHFS---------EQNFMTEWHYD-QQL 251 C D + + ++K+ S ++ ++ + + + Sbjct: 244 NGSILKENERFQRENEVIYSCVDIFRLKSERLKNLSFRDATKFTGKKPYIINFKFGCTNI 303 Query: 252 SQWNYMSDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 S ++ D ++P + E + +N +L + K +IG+SGG+DS Sbjct: 304 SHFDRFIDKHP---FVPSSKYEREERCKEIFNIQSAALAKRFEHTGSKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V L K N+ TI +P T+ ++ +A K L C + I D Sbjct: 361 TLALLVVVKTFELLNLDKHNIVTITMPGFGTTDRTYNNALTLCKELNCDLREINIVDASL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + + EN+Q+R R ILM L+N + +L+ T + SE+++G+ T G Sbjct: 421 QHFKDIGH--DKNIHDVTYENVQARERTQILMDLANKEQGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASW-----RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 D ++ + KT V L + NS + + L + P +L K + E+ Sbjct: 479 DHMSMYSVNPSIPKTLVRYLVRYVAEKESNSEVSKTLIDILDTPVSPELLPKDANGEIT- 537 Query: 476 HQTDQESLPPYPILDDIIKRIVENEES-----FINNDQEYNDETVRYVEHLL-------Y 523 Q ++ + PY + D + ++N S F+ + +D + +E L + Sbjct: 538 -QKTEDIVGPYELHDFFLYHFIKNGSSKDRILFLAKEAFKDDYSYEEIEKWLNKFMWRFF 596 Query: 524 GSEYKRRQAPVGTKITAKSF 543 ++KR P G K+ + S Sbjct: 597 TQQFKRSALPDGPKVGSISL 616 >gi|154485114|ref|ZP_02027562.1| hypothetical protein EUBVEN_02837 [Eubacterium ventriosum ATCC 27560] gi|149734067|gb|EDM50186.1| hypothetical protein EUBVEN_02837 [Eubacterium ventriosum ATCC 27560] Length = 637 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 131/551 (23%), Positives = 228/551 (41%), Gaps = 74/551 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A VGD N A+ + +E G L++F EL I+GY DL ++KS + Sbjct: 6 VKVAAATPKIKVGDCGYNGAQICKIIDEVYDNGAQLVVFPELCITGYTCSDLFWQKSMLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + D +VG P + + N ++ G I+ + K +PNYSEF+ Sbjct: 66 MAKTHLQFISEHCEDKEIVAIVGLPMIYRSKLYNVAAVIYDGEILGLVPKTYIPNYSEFY 125 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R F SG + D V F + I ICED+W + Sbjct: 126 EARHFTSGKNKDGYVMIGEEEVPFGTEILFNCVNFENFSFAIEICEDLWVPNPPSTSHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R +V+GQ + IY + G+ +L+F G + Sbjct: 186 AGATVIANLSASDETTGKDIYRTGLVSGQSARTLSAYIYADAGEGESTTDLVFAGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD----QQLSQWNYMSDDSASTMYIPLQEEEADYNA- 278 + L+ Q K F Q + D ++ ++ D+ S + ++ E D+ Sbjct: 246 ENGNILS-QSKRFENQTIYADIDLDRLAAERAKMTTFIPDEELSYEEVEVELEPIDFEVE 304 Query: 279 -------------------C-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 C + L+ ++ N ++G+SGG+DS L + Sbjct: 305 RVIDNAPFVPSNTNEREKRCEEILSIQTMGLKKRLEHTNCKNAVVGISGGLDSTLALLVT 364 Query: 313 VDALGKENVQ-----TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLM 366 A K N+ + +P T+ ++ +A + + LGC + + I + V H M Sbjct: 365 ARAFDKLNLDRKGIIAVTMPGFGTTDRTYTNAVSMIEKLGCTFKEVNISEATVLH----M 420 Query: 367 SQFLQE-EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 +Q + + EN Q+R R +LM +N M++ T + SE+++G+ T GD Sbjct: 421 NQIEHDINIHDVTYENAQARQRTYLLMDFANEHNGMVIGTGDMSELALGWATYNGDHMSM 480 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + + T L++V+ +L+ S EL P Q Sbjct: 481 YGVNAGVPKTLVRHLVKYFSD---TCEDKELSDVL-NDVLDTPVSPELLPPKDGKIAQKT 536 Query: 480 QESLPPYPILD 490 ++ + PY + D Sbjct: 537 EDLVGPYELHD 547 >gi|313794103|gb|EFS42123.1| NAD+ synthetase [Propionibacterium acnes HL110PA1] gi|313803224|gb|EFS44420.1| NAD+ synthetase [Propionibacterium acnes HL110PA2] gi|313839242|gb|EFS76956.1| NAD+ synthetase [Propionibacterium acnes HL086PA1] gi|314963998|gb|EFT08098.1| NAD+ synthetase [Propionibacterium acnes HL082PA1] gi|315078355|gb|EFT50392.1| NAD+ synthetase [Propionibacterium acnes HL053PA2] gi|315081448|gb|EFT53424.1| NAD+ synthetase [Propionibacterium acnes HL078PA1] gi|327334445|gb|EGE76156.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL097PA1] gi|327457535|gb|EGF04190.1| NAD+ synthetase [Propionibacterium acnes HL092PA1] Length = 689 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 138/575 (24%), Positives = 235/575 (40%), Gaps = 101/575 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV----------------------FR-----DIRLGILICEDIWKNSN 158 KR F G ++ FR D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVASSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFM-----TEWHYDQQLSQWNYMSDDSA--------- 262 DG + ++ LA + E + ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLNLLRQERLRQGSF--DDNALAQPAQAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T++ P + D YN V LR ++ K+ Sbjct: 313 RTTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D +G + ++ +P T+ + +A +ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSG-------IVAENIQSRIRGNILMALSNHSKAMLL 403 +VL I MS P+G + EN+Q+ +R + L ++N ++L Sbjct: 433 EVLDIRPAATQMLKGMSH-----PAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVL 487 Query: 404 TTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIP 461 T + SE+++G+ T GD + + KT + L W I+SG T V+ Sbjct: 488 GTGDLSELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVL 543 Query: 462 PSILEKSPSAELRPH------QTDQESLPPYPILD 490 S+L S EL P Q+ Q + PY + D Sbjct: 544 ESVLGTEISPELVPARPGEKIQSTQAKIGPYELQD 578 >gi|14590117|ref|NP_142181.1| NAD synthetase [Pyrococcus horikoshii OT3] gi|6093470|sp|O57921|NADE_PYRHO RecName: Full=Probable NH(3)-dependent NAD(+) synthetase gi|146386765|pdb|2E18|A Chain A, Crystal Structure Of Project Ph0182 From Pyrococcus Horikoshii Ot3 gi|146386766|pdb|2E18|B Chain B, Crystal Structure Of Project Ph0182 From Pyrococcus Horikoshii Ot3 gi|3256568|dbj|BAA29251.1| 257aa long hypothetical NH(3)-dependent NAD(+) synthetase [Pyrococcus horikoshii OT3] Length = 257 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 28/266 (10%) Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 DY+ + + +++++ + V+IG+SGG+DSA A +A ALGKE V +++PY + Sbjct: 5 DYDKVIERILEFIREKGNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPY--FENK 62 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +EDA A+ LG Y V+ I +V+ F + L + G NI SR R +L A Sbjct: 63 DVEDAKLVAEKLGIGYKVINIKPIVDSFVENLELNLDRKGLG----NIMSRTRMIMLYAH 118 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +N ++L TSN+SE GY T +GD + + P+ +LYKT+V+++A +G Sbjct: 119 ANSLGRIVLGTSNRSEFLTGYFTKWGDGASDYAPIINLYKTEVWEIA---------KRIG 169 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE----NEESFINNDQE 509 +P I++K PSA L QTD++ L Y +LD+I+ R+++ EE I D Sbjct: 170 -----VPERIVKKKPSAGLWEGQTDEDELGISYNLLDEILWRMIDLKIGKEE--IAKDLG 222 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVG 535 V VE L+ SE+KRR P+G Sbjct: 223 IPLSLVERVEELIKKSEHKRR-LPIG 247 >gi|314932532|gb|EFS96363.1| NAD+ synthetase [Propionibacterium acnes HL067PA1] Length = 689 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 139/575 (24%), Positives = 237/575 (41%), Gaps = 101/575 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV----------------------FR-----DIRLGILICEDIWKNSN 158 KR F G ++ FR D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----QQLSQWNYMSDDSA--------- 262 DG + ++ LA + E + + + D ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSF--DDNALAQPAQAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T++ P D YN V LR ++ K+ Sbjct: 313 RTTIFTLDPPHDDIGLERPVNRFPFVPNGPDQLAQDCYEAYNIQVYGLRRRLESMGSPKI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D +G + ++ +P T+ + +A +ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSG-------IVAENIQSRIRGNILMALSNHSKAMLL 403 +VL I MS P+G + EN+Q+ +R + L ++N ++L Sbjct: 433 EVLDIRPAATQMLKGMSH-----PAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVL 487 Query: 404 TTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIP 461 T + SE+++G+ T GD + + KT + L W I+SG T V+ Sbjct: 488 GTGDLSELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVL 543 Query: 462 PSILEKSPSAELRPH------QTDQESLPPYPILD 490 S+L S EL P Q+ Q + PY + D Sbjct: 544 ESVLGTEISPELVPARPGEKIQSTQAKIGPYELQD 578 >gi|291548285|emb|CBL21393.1| NAD+ synthetase [Ruminococcus sp. SR1/5] Length = 649 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 140/624 (22%), Positives = 256/624 (41%), Gaps = 101/624 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + +A E ++ + L++F E I+GY DL ++ + Sbjct: 6 IKVAAATPRVTVADCKANGEEILKAIHEMEKEHVKLMVFPEFCITGYTCHDLFLQRCLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + +T + A I VG P + + + N L+ G I+ K ++PNY+EF+ Sbjct: 66 SAWDELLHIAEETRETDALIFVGLPLRHRGKLYNVAAALNHGRIVGFVPKTHIPNYNEFY 125 Query: 125 EKRTFISGYSND-------------------------PIVFR-----DIRLGILICEDIW 154 E+R F D ++F + + +CED+W Sbjct: 126 EQRQFAGAEEEDVEFVDFLKCEKNEEDEFWDEIPFGTELIFECKEFPEFTVAAELCEDLW 185 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-- 212 + GA + +L+AS K R +++GQ + + IY + G+ Sbjct: 186 VPAPPSIRHAVNGAHIIVNLSASDEMVGKDSYRRTLISGQSARLICGYIYASAGEGESTQ 245 Query: 213 ELIFDGASFCFDGQQQLAFQMKH-----FSEQNFMTEWHYDQQLSQWNYMSDDSASTM-- 265 +L+F G + + LA + +SE + +++S + +S S + + Sbjct: 246 DLVFGGQNMIAENGSMLAESRRFENGIIYSEIDVQRLADERRRMSTYPAVSTCSHTRVDF 305 Query: 266 -----------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++P +EE D N + L+ ++ + ++GLSGG Sbjct: 306 SVAEEKTRLTRKYPQYPFVPSVKEERDERCEEILNIQAMGLKKRMEHIHSRSAVVGLSGG 365 Query: 303 IDSALC---AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS L A A D +G +E + + +P T+ ++ ++A ++ LG + + I + Sbjct: 366 LDSTLALLVMARAFDRMGMPREQIHCVTMPCFGTTDRTYQNACKLSRCLGARLTEVNIKE 425 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 VN F + E + EN Q+R R ILM +N +L+ T + SE+++G+ T Sbjct: 426 AVNIHFRDIGH--DPEIHDVTYENSQARERTQILMDTANKEGGVLVGTGDLSELALGWAT 483 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-- 475 GD + + KT V L + + T G L EV+ IL+ S EL P Sbjct: 484 YNGDHMSMYGVNASVPKTLVRHLVRY---YADTCGDEELKEVL-LDILDTPVSPELLPPK 539 Query: 476 ----HQTDQESLPPYPILD-------------DIIKRIVENEESFINNDQEYNDETV--- 515 Q ++ + PY + D D I R+ + + D Y+ ET+ Sbjct: 540 DGKIAQKTEDLVGPYELHDFYLYYMLRAGFTPDKIYRL-----ACLTFDGIYDKETILKW 594 Query: 516 -RYVEHLLYGSEYKRRQAPVGTKI 538 + + ++KR P G K+ Sbjct: 595 LKTFYRRFFAQQFKRSCLPDGPKV 618 >gi|226228191|ref|YP_002762297.1| NH(3)-dependent NAD (+) synthetase [Gemmatimonas aurantiaca T-27] gi|226091382|dbj|BAH39827.1| NH(3)-dependent NAD (+) synthetase [Gemmatimonas aurantiaca T-27] Length = 641 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 137/272 (50%), Gaps = 25/272 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ + + F K ++G+SGG+DSA+ AA+AV ALG NV + LPY+ +S +SL+ A Sbjct: 390 LREEMARRGFGKAVVGISGGVDSAVTAALAVRALGASNVIGVRLPYRTSSAESLDHAQLV 449 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--SGIVAENIQSRIRGNILMALSNHSKA 400 ALG + L I V+ +L EP G N+ +R+R L LS +A Sbjct: 450 IDALGIESRTLDISPAVD-------GYLANEPDADGARRGNVMARVRMIALFDLSARYRA 502 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 + L T NK+E GY T + D S NP+ DLYKTQV++LA + Sbjct: 503 LPLGTGNKTERLFGYFTWHADDSPPVNPIGDLYKTQVWELARHLE--------------L 548 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 P ++ K+P+A+L QTD+ L YP D+I+ ++ + +++E + V Sbjct: 549 PSIVITKAPTADLIVGQTDESDLGISYPRADEILNGLLHGYSDEAMRARGFSEEELGIVS 608 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPI 551 L G+ +KRR P ++ G L P+ Sbjct: 609 RRLNGTHWKRRP-PATALVSQSGIGESYLRPV 639 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 32/200 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARR--AREEANRQGMDLILFTELFISGYPPEDLV-- 57 ++ L IA+ Q P GD GN+A+ R A+ + ++ F E +SGY E V Sbjct: 6 IRPLTIALCQFAPRKGDTVGNLARIGRLCAQAASLEPRPQVVHFPETALSGYFVEGGVRE 65 Query: 58 -----------FKKSFIQAC-SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS----VV 101 ++ AC ++ +D + D +V+GF + ++ + NS + Sbjct: 66 VAVTAGVLAYDLDDAYRAACLTAGLDLVPLD-------VVIGFYERWRDTLHNSAAYITI 118 Query: 102 ILDAGNIIA--VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-SN 158 LD G + V K LP Y F E+R G R +L+CED W + S Sbjct: 119 GLDDGPPVLRHVHRKNFLPTYGLFDEERFVERGTDIRAFETPWGRAALLVCEDAWHSISG 178 Query: 159 ICKHLKKQGAEFLFSLNASP 178 L GA+ +F +A+P Sbjct: 179 TLAAL--DGAQLVFVSSAAP 196 >gi|160932915|ref|ZP_02080304.1| hypothetical protein CLOLEP_01756 [Clostridium leptum DSM 753] gi|156867989|gb|EDO61361.1| hypothetical protein CLOLEP_01756 [Clostridium leptum DSM 753] Length = 640 Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 115/495 (23%), Positives = 212/495 (42%), Gaps = 58/495 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A A V D + N + + EA+ +G+ L++F EL I+GY DL ++ + Sbjct: 6 IKAAAATPEIRVADCSYNAGQTVKLMREASEKGVKLLVFPELCITGYTCSDLFLQRRLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + V G P ++ + N ++ G I+ V K NLPNY+EF+ Sbjct: 66 GALTALRTVMEASRKLSLLTVAGLPLTVEDKLYNCAAVIFQGEILGVVPKTNLPNYNEFY 125 Query: 125 EKRTFISGYSNDPI-------------------VFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F+ + + + ++++ + ICED+W + Sbjct: 126 EKRHFVPAPAENTVCRLFGKEVPFGSKLLFCCDTLSELKVAVEICEDLWSPIPPSNYHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R E+V GQ + IY + G+ +L+F G + Sbjct: 186 AGATIIANPSASNEVIGKDAYRKELVGGQSGRLVCGYIYASAGEGESTTDLVFSGHNLIA 245 Query: 224 D-----GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADY-- 276 + + +L SE + ++LS + + D+ +Y L E+ + Sbjct: 246 ENGAILAESRLFHNSLTISELDVQRLSGERRRLSSFPAVQDEGYQRIYFSLPVEKTNLTR 305 Query: 277 ----------------NAC-------VLSLRDYVQKNNFHKVIIGLSGGIDS--ALC-AA 310 N C L L+ ++ + ++G+SGG+DS ALC A Sbjct: 306 IIDPRPFIPSEQSTLKNRCETILSIQSLGLKKRLEHSRAKTAVVGISGGLDSTLALCVTA 365 Query: 311 IAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A+D L + ++ I +P T+ ++ +A A+ LG + + I V F + Sbjct: 366 RAMDLLNRPRTDIIAITMPCFGTTQRTKSNAEILAQRLGVTLERVDIAKQVLQHFEDIGH 425 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + + EN Q+R R +LM +N + +++ T + SE+++G+ T GD + Sbjct: 426 --SPDDQDVTFENAQARTRTLVLMDWANQTGGLVIGTGDLSELALGWATYNGDHMSMYGV 483 Query: 429 LKDLYKTQVFQLASW 443 + KT + L S+ Sbjct: 484 NASIPKTLIRHLVSY 498 >gi|218514538|ref|ZP_03511378.1| NAD synthetase [Rhizobium etli 8C-3] Length = 113 Score = 130 bits (328), Expect = 4e-28, Method: Composition-based stats. Identities = 65/108 (60%), Positives = 81/108 (75%), Gaps = 1/108 (0%) Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEY 510 S LGP EVIP +I++K+PSAELRP Q DQ+SLPPYP+LDDI++ +VE E + Sbjct: 5 SALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLPPYPVLDDILECLVEKEMAVEEIVARG 64 Query: 511 ND-ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +D TV VEHLLY +EYKRRQ+ G KIT K+FGRDR YPI+N+FRD Sbjct: 65 HDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNFGRDRRYPITNRFRD 112 >gi|282854547|ref|ZP_06263883.1| NAD+ synthetase [Propionibacterium acnes J139] gi|282582408|gb|EFB87789.1| NAD+ synthetase [Propionibacterium acnes J139] gi|314922030|gb|EFS85861.1| NAD+ synthetase [Propionibacterium acnes HL001PA1] gi|314965986|gb|EFT10085.1| NAD+ synthetase [Propionibacterium acnes HL082PA2] gi|314980691|gb|EFT24785.1| NAD+ synthetase [Propionibacterium acnes HL110PA3] gi|315090990|gb|EFT62966.1| NAD+ synthetase [Propionibacterium acnes HL110PA4] gi|315095215|gb|EFT67191.1| NAD+ synthetase [Propionibacterium acnes HL060PA1] gi|315105332|gb|EFT77308.1| NAD+ synthetase [Propionibacterium acnes HL050PA2] gi|327328842|gb|EGE70602.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL103PA1] Length = 689 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 148/648 (22%), Positives = 258/648 (39%), Gaps = 119/648 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELDSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV----------------------FR-----DIRLGILICEDIWKNSN 158 KR F G ++ FR D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLIFHVEVCEDLWMPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALTGAIVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----QQLSQWNYMSDDSA--------- 262 DG + ++ LA + E + + + D ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSF--DDNALAQPTQAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T + P + D YN V LR ++ ++ Sbjct: 313 RTTTFTLDPPHDDIGLERPVNRFPFVSNDPDQLAQNCYEAYNIQVYGLRRRLESMRSPQI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D +G + ++ +P T+ + +A +ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDLCRALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +VL I MS + E + EN+Q+ +R + L ++N ++L T + Sbjct: 433 EVLDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDL 492 Query: 409 SEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILE 466 SE+++G+ T GD + + KT + L W I+SG T V+ S+L Sbjct: 493 SELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVLESVLG 548 Query: 467 KSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN--------------------- 499 S EL P Q+ Q + PY + D + ++ + Sbjct: 549 TEISPELVPAHPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVG 608 Query: 500 --EESFINNDQEYND-----ETVRYVEHLLYGSEYKRRQAPVGTKITA 540 F + D+ D + R G+++KR P G K+ A Sbjct: 609 SWPPGFPDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVA 656 >gi|210616215|ref|ZP_03290995.1| hypothetical protein CLONEX_03214 [Clostridium nexile DSM 1787] gi|210149881|gb|EEA80890.1| hypothetical protein CLONEX_03214 [Clostridium nexile DSM 1787] Length = 639 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 128/550 (23%), Positives = 225/550 (40%), Gaps = 71/550 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A LN V D+ N + R +E G +++F EL I+GY DL + + Sbjct: 6 VKVAAATLNTKVADVEHNKWEIFRLIDETIENGAKIVVFPELCITGYTCGDLFSQDILLS 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A++ + + T VG P + N + G +I + K LPNYSEF+ Sbjct: 66 QSAKALEEIAAYTTGKDGLFFVGLPYVVCNKLYNVAAAVCDGEVIGMVTKTFLPNYSEFY 125 Query: 125 EKRTFISG--------YSNDPIVFR-----------DIRLGILICEDIWKNSNICKHLKK 165 E R F G Y + I F ++ + +CED+W Sbjct: 126 EMRQFQPGPKKADWIPYGEEEIPFGPQILFACEELPNLVVSAEVCEDVWSPVPPSIQAAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R ++++GQ + + +Y N G+ +++F G + Sbjct: 186 AGATIVVNCSASDETVGKDAYRKQLISGQSARLIAGYVYANAGDGESTTDVVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN-----YMSDDSASTMYIPLQ-------- 270 + L+ + + F Q +E D+ +S+ M +D + +P Sbjct: 246 ENGSILS-ESERFMNQTIYSEIDVDRIVSERRKNTTFQMEEDLDRFIRVPFSIKVEDTKL 304 Query: 271 -----------EEEADYNACV--------LSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 E E+ N C + L+ + N ++G+SGG+DS L + Sbjct: 305 TRTFEKLPFVPENESLRNRCCEESLMIQAMGLKKRLNHTNCKSAVVGISGGLDSTLALLV 364 Query: 312 AVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A + + ++ + +P T+ ++ ++A K LG + I D V F + Sbjct: 365 TAKAFDLQGIDRSCIEAVTMPCFGTTDRTYQNACVLTKKLGATLHEVNIQDAVRVHFRDI 424 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 EE + EN Q+R R +LM ++N + M++ T + SE+++G+ T GD + Sbjct: 425 GH--SEEKHDVTYENAQARERTQVLMDIANQTGGMVIGTGDMSELALGWATYNGDHMSMY 482 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L + T L EV+ IL+ S EL P Q + Sbjct: 483 GVNSSVPKTLVRHLVQYCAD---TCEDKELQEVL-VDILDTPVSPELLPPKEGEIAQKTE 538 Query: 481 ESLPPYPILD 490 + + PY + D Sbjct: 539 DLVGPYELHD 548 >gi|288925764|ref|ZP_06419695.1| glutamine-dependent NAD+ synthetase [Prevotella buccae D17] gi|288337419|gb|EFC75774.1| glutamine-dependent NAD+ synthetase [Prevotella buccae D17] Length = 651 Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 133/560 (23%), Positives = 236/560 (42%), Gaps = 78/560 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + A QG+++I+F EL I+GY +DL ++ ++ Sbjct: 6 IKVATAIPSVKVGDVKFNTRQIESQIALAEGQGVEIIVFPELCITGYTCQDLFLQQMLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +A+ L T +VG P + +LN I+ G I+ + K LPNY EF+ Sbjct: 66 SAETAMMMLLDFTRQLDIISIVGLPVVVGDLLLNCAAIIQHGKILGLVPKTYLPNYREFY 125 Query: 125 EKRTFISG----------------YSNDPIVF---RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S + DP +F + G+ CED+W + L Sbjct: 126 EKRWFASAQDLRETTVRFAGHRITVTPDPQIFITSEGAQFGVENCEDVWAPAPPSNKLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV---------NQVGGQDELIF 216 GAE +F+L+AS K ++ Q + IY + V G + LI+ Sbjct: 186 AGAELIFNLSASDELSGKHTYLKSLLAQQSARTITGYIYSSCGFGESTQDVVFGGNALIY 245 Query: 217 DGASFCFDGQQ-QLAFQM--------KHFSEQNFMTEW------------------HYDQ 249 + S +G++ L QM K SE+ + + H + Sbjct: 246 ENGSLIAEGERFALEPQMRIAQIDIEKLRSERRTNSTYVNAQRNVKYAIRSGRYSVHNIE 305 Query: 250 QLSQWN----YMSDDSASTMYIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLS 300 L+ +N + + + +IP + E E +N ++ L + +I+G+S Sbjct: 306 MLASFNRRDFVLEREIDAHPFIPHEAEMGVTCEEIFNIQLMGLAKRIVHTGAKHLILGIS 365 Query: 301 GGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L + V A + ++++ + +P T+ ++ +A +LG + I Sbjct: 366 GGLDSTLALLVCVKAFDKLGMNRKDIIGVTMPGFGTTDRTYRNAITLMGSLGVTIREISI 425 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 D V F + + + EN Q+R R ILM LSN +++ T + SE+++G+ Sbjct: 426 TDAVEQHFKDIGHDISVHD--VTYENAQARERTQILMDLSNELGGIVVGTGDLSELALGW 483 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPS 470 T GD + + KT + + + G+ + L + I P + S Sbjct: 484 ATYNGDHMSMYGVNASVPKTLIQHMVRYVAESGVDEKSRVTLLDIVDTPISPELTPADES 543 Query: 471 AELRPHQTDQESLPPYPILD 490 E+R Q ++ + PY + D Sbjct: 544 GEIR--QKTEDLVGPYELHD 561 >gi|224372660|ref|YP_002607032.1| NAD+ synthetase [Nautilia profundicola AmH] gi|223589516|gb|ACM93252.1| NAD+ synthetase [Nautilia profundicola AmH] Length = 278 Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 145/270 (53%), Gaps = 30/270 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ + K K I GLSGGIDSA+ A +A ALG +N + +LP +++S S+EDA Sbjct: 30 IQEEITKTGLKKGICGLSGGIDSAVVAVLAKKALG-DNFKAFLLPSQFSSKSSVEDALKL 88 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--SGIVAENIQSRIRGNILMALSNHSKA 400 + ++ + I L+N + P + N +R+R IL S A Sbjct: 89 CEKFDIDHETISIAPLLNAY-----------PIDDKVRFGNFSARMRMAILYDKSAELGA 137 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +++ TSNKSE+ +GYGTL+GD++ NP+ DLYKT++F+ A + LG + Sbjct: 138 LVIGTSNKSELLLGYGTLFGDLASALNPIGDLYKTEIFEFAEY---------LG-----V 183 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 I+ K PSA+L Q+D++ L Y LD +++ V+ + ++Y+ + V +V Sbjct: 184 NEEIINKPPSADLWEGQSDEKELGYTYEELDAVLRDFVDERATKEELLRKYDKDLVEFVL 243 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 +Y +++KR+ P+ K+ +++ D LY Sbjct: 244 KKIYFNQFKRKM-PIIAKLKSRTITHDFLY 272 >gi|167758826|ref|ZP_02430953.1| hypothetical protein CLOSCI_01169 [Clostridium scindens ATCC 35704] gi|167663566|gb|EDS07696.1| hypothetical protein CLOSCI_01169 [Clostridium scindens ATCC 35704] Length = 641 Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 141/616 (22%), Positives = 251/616 (40%), Gaps = 96/616 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N K +E ++G ++ F EL ++GY DL ++ +Q Sbjct: 8 VKVAAATPDIRVADVTYNTEKICGLIDETVKEGAKVVAFPELCVTGYTCGDLFTQEVLLQ 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ + S T A I VG P + + N L+ G I+ + K LPNY EF+ Sbjct: 68 EARAALHKIASHTKGKDALIFVGVPVAVEGKLYNVAAALNQGKILGLTTKSFLPNYGEFY 127 Query: 125 EKRTFISGYSNDPIVFRDIR-----------------------LGILICEDIWKNSNICK 161 E R F G P V R+I + ICED W + Sbjct: 128 EMRQFTEG----PSVAREILFDGEKMPFGPQLLFVADSMESLVVSAEICEDAWSSVPPSI 183 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 ++GA + + +AS K R ++ GQ + + +Y N G+ +L+F G Sbjct: 184 EAAREGAVIIANCSASDETVGKSTYRRNLIEGQSARLICGYLYANAGEGESTTDLVFGGH 243 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-------------------WNYMSDD 260 + + L + + F TE + L + + ++ Sbjct: 244 NLIAENGSVLK-EGRRFENGVIYTEIDIKRLLGERRKNTTFQTAKEPKLIRVPFTICKEE 302 Query: 261 SASTMYIP----LQEEEADY-NAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 +A T P + EEE + C + L+ + ++G+SGG+DS L Sbjct: 303 TALTRTFPSRPFVPEEEGERARRCEEILMIQAMGLKKRISHARAKSAVVGISGGLDSTLA 362 Query: 309 ---AAIAVDALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 A A DALG E ++ + +P T+ ++ ++A ++ LG +PI V F Sbjct: 363 LLVTAKAFDALGMERKDIVAVTMPCFGTTDRTYQNACKMSRKLGATLREIPIGASVEQHF 422 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + L + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 423 KDIGHDLDDH--SVTYENSQARERTQVLMDVANQAGGIVIGTGDMSELALGWATYNGDHM 480 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQ 477 + + KT V L + + L + + +L+ S EL P Q Sbjct: 481 SMYGVNASVPKTLVRHLVHYYADSCEDAEL----KAVLYDVLDTPVSPELLPPKDGEIAQ 536 Query: 478 TDQESLPPYPILDDIIKRIVE-----------NEESFINNDQEYNDETVRYVEHL----L 522 ++ + PY + D + ++ + SF + EY++ET+ H Sbjct: 537 KTEDLVGPYELHDFFLYYLLRFGYEPGKIYRIAKRSF---EGEYDEETIYKWLHTFCRRF 593 Query: 523 YGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 594 FTQQFKRSCLPDGPKV 609 >gi|313158587|gb|EFR57981.1| NAD+ synthase [Alistipes sp. HGB5] Length = 683 Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 124/500 (24%), Positives = 211/500 (42%), Gaps = 65/500 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+A A + VGD N + EEA ++G++++ F EL ++ Y DL+ + + Sbjct: 45 LKVAAAVPHVRVGDCDFNTERIAAMAEEAAQRGVEIVAFPELAVTAYTCADLLLLPALLD 104 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L T I+ G P + + N V+ G ++ V K +P+Y+EF+ Sbjct: 105 AADEALARLVKATRKLPLVIIAGAPLRHGSTLYNCAVVFTQGRVLGVVPKTYIPDYTEFY 164 Query: 125 EKRTFIS--GYSNDPIVFRD---------------IRLGILICEDIWKNSNICKHLKKQG 167 E R F S G S + I + G+ ICED+W HL G Sbjct: 165 ENRWFASGAGISEETISVAEQSADFGADLTFGINGTEFGVEICEDLWTAIPPSSHLALNG 224 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC--- 222 A+ +F+L+ASP K ++V Q + +Y + G+ +L+F G Sbjct: 225 AKVIFNLSASPESVGKHAYLRQLVAQQSARTLAGYVYCSAGFGESSTDLVFAGNGIVAEN 284 Query: 223 ---------------------------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN 255 F+ ++ +F+M + +N + E + L + Sbjct: 285 GRILRESGRFRLEEQLVVADIDIQRLEFERRRNTSFRMHEGAAENTVIEMEVPEGL-RAA 343 Query: 256 YMSDDSASTMYIPLQEEEADYNAC--VLSLRDY-VQKNNFH----KVIIGLSGGIDSALC 308 + D ++P Q+E C + ++ + + K H K +IG+SGG+DS L Sbjct: 344 ALDRDIDPMPFVP-QDEAHRSERCEEIFQIQSHGLAKRLVHTRCEKAVIGISGGLDSTLA 402 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V D LG + + I +P T+ ++ +A + LG +PI D F Sbjct: 403 LLVTVRTFDKLGLDRAGIIGITMPGFGTTDRTYNNALELMRGLGVTIREIPIRDACTQHF 462 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S + L E EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 463 SDIG--LDPEDRSAAYENSQARERTQILMDVANMEGGLVVGTGDLSELALGWATYNGDQM 520 Query: 424 GGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 521 SMYGVNASVPKTLVRHLVKW 540 >gi|296448109|ref|ZP_06890010.1| NAD+ synthetase [Methylosinus trichosporium OB3b] gi|296254374|gb|EFH01500.1| NAD+ synthetase [Methylosinus trichosporium OB3b] Length = 676 Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 140/566 (24%), Positives = 233/566 (41%), Gaps = 91/566 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ V D A N+A+ EA+ +G ++LF EL IS Y +DL+ + + + Sbjct: 14 VRVAVGGPRTRVADPAFNVARTIEMAREADARGASIVLFPELGISSYAIDDLLHQDALLA 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ L + + VG P + + + N V+ G I+AV K+ LPNY EF+ Sbjct: 74 AVEAALGELLEASRALHPILAVGAPLRWRSRLYNCAVLARRGEILAVTPKVYLPNYREFY 133 Query: 125 EKRTFISG----------------YSNDPIV----FRDIRLGILICEDIWKNSNICKHLK 164 EKR F SG + +D ++ F + + ICED+W Sbjct: 134 EKRHFASGASIAGEEIDIAGRLAPFGSDVLLEARDFAGLVIHAEICEDVWVPIPPSTRAA 193 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGAS 220 GA L +L+AS K R + G + +Y GQ E L +DG + Sbjct: 194 LAGATVLLNLSASDAIVGKSDYRASLCAGHSARCLSAYLY--SAAGQGESTTDLSWDGEA 251 Query: 221 FCFDGQQQLAFQMK-------------------------------------HFSEQNFMT 243 ++ +LA + F F Sbjct: 252 MIYENGARLASAERFAETPQLIFADLDIGRLEAERMRQGSFGDCADVEAATRFRRVLFDL 311 Query: 244 EWHYDQQL------SQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E D+ L +++ ++ DD A + + +N LR +Q +++I Sbjct: 312 EAPRDKNLGLLREVARFPFVPDDEARLAELCFEA----FNIQSHGLRQRLQAAKIDRIVI 367 Query: 298 GLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS L A A DALG + N+ LP T+ ++ +A +ALG + Sbjct: 368 GVSGGLDSTHALLVAVAAFDALGLPRTNILAYTLPAFATTDRTKANAWRLMRALGVSAEE 427 Query: 353 LPIHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + + + E + EN+Q+ R ++L L+N A++L T + SE Sbjct: 428 IDVGPACRQMLDDIGHPAARGEALYDVTYENVQAGARTSLLFRLANRHDAIVLGTGDLSE 487 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW--RNSHGITSGLGPLTEVIPPSILEK 467 I++G+ T GD +N + KT + L W R++H G T + IL+ Sbjct: 488 IALGWCTYGVGDQMSHYNVNASVPKTLIQHLIRWCARDAH-----FGAATAPVLRDILDT 542 Query: 468 SPSAELRPHQTDQES---LPPYPILD 490 S EL P +T Q + + PY + D Sbjct: 543 EISPELVPGETTQRTEDVVGPYALQD 568 >gi|313829234|gb|EFS66948.1| NAD+ synthetase [Propionibacterium acnes HL063PA2] gi|315110544|gb|EFT82520.1| NAD+ synthetase [Propionibacterium acnes HL030PA2] Length = 689 Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 138/575 (24%), Positives = 237/575 (41%), Gaps = 101/575 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV----------------------FR-----DIRLGILICEDIWKNSN 158 KR F G ++ FR D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----QQLSQWNYMSDDSA--------- 262 DG + ++ LA + E + + + D ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSF--DDNALAQPAQAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T++ P + D YN V LR ++ K+ Sbjct: 313 RTTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDAL--GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D + + ++ +P T+ + +A +ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMRRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSG-------IVAENIQSRIRGNILMALSNHSKAMLL 403 +VL I MS P+G + EN+Q+ +R + L ++N ++L Sbjct: 433 EVLDIRPAATQMLKGMSH-----PAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVL 487 Query: 404 TTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIP 461 T + SE+++G+ T GD + + KT + L W I+SG T V+ Sbjct: 488 GTGDLSELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVL 543 Query: 462 PSILEKSPSAELRPH------QTDQESLPPYPILD 490 S+L S EL P Q+ Q + PY + D Sbjct: 544 ESVLGTEISPELVPARPGEKIQSTQAKIGPYELQD 578 >gi|169349679|ref|ZP_02866617.1| hypothetical protein CLOSPI_00417 [Clostridium spiroforme DSM 1552] gi|169293754|gb|EDS75887.1| hypothetical protein CLOSPI_00417 [Clostridium spiroforme DSM 1552] Length = 636 Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 140/617 (22%), Positives = 243/617 (39%), Gaps = 88/617 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA A + + DI N + + E+A +I+F EL ++GY EDL + + Sbjct: 8 IRIAAASFDTNIADIKNNSLQICKLIEQAYENKAKIIVFPELCLTGYTCEDLFNQDRLLN 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + T + +VVG P Q + N I+ +G ++ + K ++PNY EF+ Sbjct: 68 EAKFQLQNIIEKTINKDIIVVVGLPYQHLNSLYNVAAIIHSGKLLGLVPKTHVPNYQEFY 127 Query: 125 EKRTFISGYSNDPIVFR-------------------DIRLGILICEDIWKNSNICKHLKK 165 E R F S + VF + + G+ ICED+W L Sbjct: 128 EARRFEKAPSKNTTVFFNGQTTPFGTKYIFASSTNCEFKFGVEICEDLWLPDAPSIDLAL 187 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 GA + + +AS K R +V Q + + +Y N G+ F G Sbjct: 188 NGATLILNPSASNEITTKKDYRRLLVKSQSARLICGYVYCNAGNGEST-----TDVVFSG 242 Query: 226 QQQLAFQMKHFSE-QNFMTEWHY---------DQQLSQWNYMSDDSASTMY--------- 266 ++ +E Q F +E Y ++ + S D T+Y Sbjct: 243 HHIISENGTIINESQGFNSEIIYGDLDLKKLSSERRKMTTFKSKDEYETIYFDSTNIDLD 302 Query: 267 --------------IPLQEEEAD--YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + L+E+ ++ L ++ N KV+IG+SGG+DS L Sbjct: 303 TTYYYDPHPFVPNNLELREKRCKEVFDIQTYGLMQRLKATNIKKVVIGISGGLDSTLALL 362 Query: 311 IAVDALGKENVQT-----IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + A K N T I +P T+ ++ +A K L + I + V F Sbjct: 363 VCTMAFKKLNYDTKDIIAITMPCFGTTSRTKNNALGLMKELNVTSYDIDISESVKIQFRD 422 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + Q E + EN+Q+R R ILM +N +++ T + SE+++G+ T GD Sbjct: 423 IEQ--DETIHDVTYENVQARTRTEILMNKANQVGGLVIGTGDLSEVALGWSTYNGDHMSM 480 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD------ 479 + + KT V L + +S G E I +L+ S EL P Q D Sbjct: 481 YAVNVSVPKTLVRYLVDYVSSL----YRGQKLEAILKDVLDTPVSPELLPQQDDKIVQKT 536 Query: 480 QESLPPYPILDDIIKRIVENEE--------SFINNDQEYNDETVR----YVEHLLYGSEY 527 ++ + PY + D I ++ + + + +Y++ET++ + ++ Sbjct: 537 EDIVGPYELHDFFIYHMIRFSDEPKKLLRKTKLAFKDKYDNETIKKWLIKFYWRFFTQQF 596 Query: 528 KRRQAPVGTKITAKSFG 544 KR P G K+ + S Sbjct: 597 KRSCIPDGPKVGSVSLS 613 >gi|149195641|ref|ZP_01872698.1| Putative glutamine-dependent NAD(+) synthetase [Lentisphaera araneosa HTCC2155] gi|149141103|gb|EDM29499.1| Putative glutamine-dependent NAD(+) synthetase [Lentisphaera araneosa HTCC2155] Length = 638 Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 156/616 (25%), Positives = 263/616 (42%), Gaps = 99/616 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ +N D N+ + + A E D ILF E+ ++ Y ED VF ++ Sbjct: 1 MQLSAITINQTPLDWENNLNRIKSAIAEC--PSSDFILFPEMSLTAYGCED-VFLSPHLR 57 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S + L+ H I +G P + + + N+V I+ II K +L N + Sbjct: 58 ERSQEL-LLELLPHSKNQIIAIGLPLEVKSKLYNAVAIIANEKIIGFYCKKHLANDGLHY 116 Query: 125 EKRTF------------ISGYSNDPI---VFR--DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F I+G P+ VF+ + R IC+D W+ + HL + Sbjct: 117 EKRWFEPWPDRHVEKIHIAG-QMVPVGDCVFQVNNFRFAFEICQDAWEETRFDSHLSELQ 175 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCFDGQ 226 + + + +AS + K R +++ + +Y N G + +I+DGA F + Sbjct: 176 LDLILNPSASHFALGKQNLRRQLIIDGAKNFDCHYLYANLNGNEAGRVIYDGAVF-YSDP 234 Query: 227 QQLAFQMKHFSEQNFMT--------------------EWHYDQQLSQWNYMSDDSASTMY 266 +L ++ + +F T + +D Q + + +S+ AS Sbjct: 235 NKLIYESERLHLDDFRTHKFNIAVSAKEKYTSSPCIVHFSHDFQEVKSDQVSNFPASKQ- 293 Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL---------- 316 L+ E A L L DY++K+ I+ LSGG+DSA CA + Sbjct: 294 --LEAHEEFLLAETLGLYDYMRKSWSKGFILSLSGGVDSATCATLVYHMCERLIVELSLE 351 Query: 317 ----------GKENVQT------IMLPYKY-----TSPQSLEDAAACAKALGCKYDVLPI 355 G ++V+ ++L Y + P + A AK++G +Y I Sbjct: 352 QTKAKLFYIPGTDSVKNAQDLCKLLLSCVYQASANSGPVTETAAEELAKSIGAEYHFFNI 411 Query: 356 HDLVNHFFSL----MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 ++ + L + + L E + +NIQ+R R + ++N A+LLTTSN+SE Sbjct: 412 EPVLEIYRGLSQNALGRELAWESDDLAMQNIQARGRAPGVWMMANLKGALLLTTSNRSEA 471 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH-GITSGLGPLTEVIPPSILEKSPS 470 +VGY T+ GD GG +PL + K VF R GL L + + + P+ Sbjct: 472 AVGYATMDGDTCGGLSPLAGIGK--VFLREYLREIEINELCGLSKLPAL--SYVNAQEPT 527 Query: 471 AELRP---HQTDQESLPPYPILDDIIKRIVEN----EESFINNDQEYND-ETVRYVEH-- 520 AELRP Q D+E L PY +LD I K + + +E F + Y D + + Y++ Sbjct: 528 AELRPPGEEQKDEEDLMPYEVLDQIQKLAIRDRLSPKEIFCELRKNYTDKDCLAYLQRFF 587 Query: 521 -LLYGSEYKR-RQAPV 534 L +++KR R AP Sbjct: 588 TLWSRNQWKRERYAPA 603 >gi|152992269|ref|YP_001357990.1| glutamine-dependent NAD+ synthetase [Sulfurovum sp. NBC37-1] gi|151424130|dbj|BAF71633.1| glutamine-dependent NAD+ synthetase [Sulfurovum sp. NBC37-1] Length = 631 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 132/590 (22%), Positives = 252/590 (42%), Gaps = 88/590 (14%) Query: 31 EEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPR 90 +EA + + +++F EL ++GY DL ++ + + + ++ + ++ + +++G Sbjct: 31 KEAADKEVSVVVFPELTLTGYTASDLFLNQTLLASQNESLQYILNNIEELDTIVILGIAL 90 Query: 91 QDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG----------------YS 134 + + + N +L G I+ + K LPN EF+EKR F+SG + Sbjct: 91 LEADRLYNCAAVLQGGEILGIIPKSYLPNKKEFYEKRQFVSGRDIVRTATELLGKEVPFG 150 Query: 135 NDPIVF---RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV 191 D ++F R++ G+ ICED+W + H+ GA LF+L+AS K + R E+V Sbjct: 151 VD-LLFTDGRNMTFGVEICEDLWAVTPPSNHMASNGANLLFNLSASNELIGKHEYREELV 209 Query: 192 TGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 Q + +Y + G+ + ++ G + + LA Q + FS ++ + D Sbjct: 210 RTQSARCMAAYVYSSAGVGESTTDTVYGGHAIISEYGTTLA-QNERFSLESSLITADIDL 268 Query: 250 QLSQWNYMSDDSAS------TMYIPLQ------EEEADYNACVLSLRDYVQKN------- 290 + +W +++ S S T I L+ E + D Y K Sbjct: 269 ERMRWLRINESSYSDGRRKKTRLIKLKSLPMMSELQRDITPAPFVPSRYTDKKLRCDEII 328 Query: 291 --------------NFHKVIIGLSGGIDSALCA-----AIAVDALGKENVQTIMLPYKYT 331 + K ++G+SGG+DS L A + N+ + +P T Sbjct: 329 HIQAHGLIKRMTHAHIKKALMGISGGLDSTLALLSTYRAFEIMGWDSRNIIAVTMPGFGT 388 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 + ++ +A +ALG + I D+ F + E + EN+Q+R R +IL Sbjct: 389 TSRTKSNAVKLCEALGVTLKEVDITDISLKEFDAIEH--NPEELSVTYENVQARARTSIL 446 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 M ++N +++ T + SEI++G+ T GD + + KT + + + S+ + Sbjct: 447 MNMANQEGGLVIGTGDLSEIALGWSTYNGDHMSMYALNSGIPKTLIRYVIEYYKSNKAIA 506 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTD------QESLPPYPILDDIIKRIVE-----NE 500 + P S EL PH D +E + PY + D + ++ ++ Sbjct: 507 DIIDDILDTP-------ISPELLPHSDDVIVQETEEIVGPYELHDFFLYHFIKYGAKPDK 559 Query: 501 ESFINN---DQEYNDETV-RYVEHLL---YGSEYKRRQAPVGTKITAKSF 543 F+ D EY++ETV ++++ L + ++KR P G K+ S Sbjct: 560 IRFLAMKAFDIEYDEETVTKWLKVFLQRFFTQQFKRSCMPDGPKVGTISL 609 >gi|260494156|ref|ZP_05814287.1| NAD+ synthetase [Fusobacterium sp. 3_1_33] gi|260198302|gb|EEW95818.1| NAD+ synthetase [Fusobacterium sp. 3_1_33] Length = 224 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 22/242 (9%) Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSAL A + DALGKENV IM+PYK ++P SL A + L + I D+ Sbjct: 1 MSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLVIEDLKINSKTIEITDM 60 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 ++ +F ++E + + N +R R +IL S+ +++ TSNK+EI +GY T Sbjct: 61 IDAYFK-----NEKEATSLRMGNKMARERMSILFDYSSKENTLVVGTSNKTEIYLGYSTQ 115 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 +GD + NP+ DLYKT ++ L+ + IP ++EK PSA+L QT Sbjct: 116 FGDSACALNPIGDLYKTNIWDLSRYLK--------------IPNELIEKKPSADLWEGQT 161 Query: 479 DQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEHLLYGSEYKRRQAPVGT 536 D++ + Y D ++ R++E ++ E +N + V + + SEYKRR P+ Sbjct: 162 DEQEMGLTYKEADQVLYRMLEENKTVEEVLAEGFNKDLVDNIVRRMNRSEYKRRM-PLIA 220 Query: 537 KI 538 KI Sbjct: 221 KI 222 >gi|315608286|ref|ZP_07883276.1| NAD synthetase [Prevotella buccae ATCC 33574] gi|315250067|gb|EFU30066.1| NAD synthetase [Prevotella buccae ATCC 33574] Length = 651 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 132/560 (23%), Positives = 236/560 (42%), Gaps = 78/560 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + A QG+++I+F EL I+GY +DL ++ ++ Sbjct: 6 IKVATAIPSVKVGDVKFNTRQIESQIALAEGQGVEIIVFPELCITGYTCQDLFLQQMLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +A+ L T +VG P + +LN I+ G I+ + K LPNY EF+ Sbjct: 66 SAETAMMMLLDFTRQLDIISIVGLPVVVGDLLLNCAAIIQHGKILGLVPKTYLPNYREFY 125 Query: 125 EKRTFISG----------------YSNDPIVF---RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S + DP +F + G+ CED+W + L Sbjct: 126 EKRWFASAQDLRETTVRFAGHRITVTPDPQIFITSEGAQFGVENCEDVWAPAPPSNKLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV---------NQVGGQDELIF 216 GAE +F+L+AS K ++ Q + IY + V G + LI+ Sbjct: 186 AGAELIFNLSASDELSGKHTYLKSLLAQQSARTITGYIYSSCGFGESTQDVVFGGNALIY 245 Query: 217 DGASFCFDGQQ-QLAFQM--------KHFSEQNFMTEW------------------HYDQ 249 + S +G++ L QM K SE+ + + H + Sbjct: 246 ENGSLIAEGERFSLEPQMRIAQIDIEKLRSERRTNSTYVNAQRNVKYAIRSGRYSVHNIE 305 Query: 250 QLSQWN----YMSDDSASTMYIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLS 300 L+ +N + + + +IP + E E +N ++ + + +I+G+S Sbjct: 306 MLAPFNRRDFVLEREIDAHPFIPHEAEMGVTCEEIFNIQLMGVAKRIVHTGAKHLILGIS 365 Query: 301 GGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L + V A + ++++ + +P T+ ++ +A +LG + I Sbjct: 366 GGLDSTLALLVCVKAFDKLGMNRKDIIGVTMPGFGTTDRTYRNAITLMGSLGVTIREISI 425 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 D V F + + + EN Q+R R ILM LSN +++ T + SE+++G+ Sbjct: 426 ADAVEQHFKDIGHDISVHD--VTYENAQARERTQILMDLSNELGGIVVGTGDLSELALGW 483 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPS 470 T GD + + KT + + + G+ + L + I P + S Sbjct: 484 ATYNGDHMSMYGVNASVPKTLIQHMVRYVAESGVDEKSRVTLLDIVDTPISPELTPADES 543 Query: 471 AELRPHQTDQESLPPYPILD 490 E+R Q ++ + PY + D Sbjct: 544 GEIR--QKTEDLVGPYELHD 561 >gi|229825579|ref|ZP_04451648.1| hypothetical protein GCWU000182_00941 [Abiotrophia defectiva ATCC 49176] gi|229790142|gb|EEP26256.1| hypothetical protein GCWU000182_00941 [Abiotrophia defectiva ATCC 49176] Length = 654 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 256/600 (42%), Gaps = 103/600 (17%) Query: 36 QGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDG-GAGIV--VGFPRQD 92 +G+ + +F EL I+GY +L ++ + SSA++TLK G ++ VG P + Sbjct: 37 RGVKIAVFPELAITGYTCGELFLQERLL---SSALNTLKKIIKASWGMDMLTFVGLPFET 93 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFI---------------SGYS--N 135 + N + G ++ + K +PNYSE +E R F SGY+ Sbjct: 94 DGKLYNVAAVFKDGELLGMVPKQYIPNYSELYEARHFTPCVGENRLLDWEENKSGYTYFG 153 Query: 136 DPIVF-----RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEI 190 + ++F +++++ ICED+W + GA + +L+ASP K + R + Sbjct: 154 NKLIFENKDIKNLKIAAEICEDLWVVIPPSNYHVMAGATIIANLSASPEIMGKQEYRRNL 213 Query: 191 VTGQISHVHLPIIYVNQVGGQD--ELIFDGASF-CFDG-------------------QQQ 228 V GQ + ++ IY G+ +L+F G + C DG + Sbjct: 214 VQGQSARLNAGYIYATTGEGESTTDLVFGGHNLICEDGIILAEKQRFKNGTIITEIDVNK 273 Query: 229 LAFQMKHFS-----------------EQNFMTEWHYD---QQLSQWNYMSDDSASTMYIP 268 L ++ + + E+ FMT+++ D +++ ++ + ++P Sbjct: 274 LTYERRKMNTCEIAGWENYDFIDFSFEKIFMTDYNADGIKEKMLIETHLERKFPKSPFVP 333 Query: 269 LQEEEADYNA------CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-----G 317 +EE D N+ L L+ + V+IGLSGG+DS L +A + Sbjct: 334 ENKEERDSNSEDVITIQSLGLKKRMAHVGCKYVVIGLSGGLDSTLAVLVACRTMDMLEIS 393 Query: 318 KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 +ENV + +P T+ ++ +A AK LG + I + V + E I Sbjct: 394 RENVIAVTMPCFGTTGRTHNNAVKLAKELGITLREINIKESVLTHLRDIGH--DENDHNI 451 Query: 378 VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 EN Q+R R +LM L+N +++ T + SE+++G+ T GD + + KT V Sbjct: 452 TFENAQARERTQVLMDLANEYGGLVIGTGDMSELALGFATYNGDHMSMYGVNASIPKTLV 511 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QTDQESLPPYPILD 490 QL + G L +V+ I+E S EL P Q ++ + PY + D Sbjct: 512 RQLVRYCAEKADEEGKEVLAQVL-VDIVETPVSPELLPTNEAGELVQKTEDIVGPYELND 570 Query: 491 ----DIIKRIVENEESF----INNDQEYNDETVRYVEHLLY----GSEYKRRQAPVGTKI 538 ++++ +E ++ F + EY++E + + Y +YKR P G K+ Sbjct: 571 FFLYNMVRWGMEPDKLFRLARTAFEDEYSNEEIEKWQKSFYRRFFAQQYKRSCLPDGPKV 630 >gi|57167809|ref|ZP_00366949.1| NAD+ synthetase [Campylobacter coli RM2228] gi|305432169|ref|ZP_07401333.1| NAD+ synthetase [Campylobacter coli JV20] gi|57020931|gb|EAL57595.1| NAD+ synthetase [Campylobacter coli RM2228] gi|304444712|gb|EFM37361.1| NAD+ synthetase [Campylobacter coli JV20] Length = 248 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 128/216 (59%), Gaps = 22/216 (10%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+ + + V++GLSGGIDSAL A + ALG ENV +++P K+++ ++L DA + L Sbjct: 18 VKDSGLNGVVLGLSGGIDSALVATLCKKALG-ENVFALLMPTKFSNQENLNDALKLCQEL 76 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 KY ++ I D++ F S+ E G N +RIR ++L S KA+++ TS Sbjct: 77 NLKYKIIEIQDILEAFLK-QSENTDELSRG----NFAARIRMSLLYDYSALKKALVVGTS 131 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE+ +GYGT+YGD++ FNP+ +LYK++++ LA + N + ++ Sbjct: 132 NKSELLLGYGTIYGDLAYAFNPIGELYKSEIYGLARYLN--------------LNEKFIQ 177 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 K+PSA+L Q+D++ L Y ++D +K + EN++ Sbjct: 178 KAPSADLWIGQSDEKDLGFSYELIDKGLKAL-ENQD 212 >gi|148926972|ref|ZP_01810649.1| putative NH(3)-dependent NAD(+) synthetase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845056|gb|EDK22153.1| putative NH(3)-dependent NAD(+) synthetase [Campylobacter jejuni subsp. jejuni CG8486] Length = 254 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 128/216 (59%), Gaps = 22/216 (10%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+ + + V++GLSGGIDSAL A + ALG ENV +++P K+++ ++L DA + L Sbjct: 24 VKDSGLNGVVLGLSGGIDSALVATLCKKALG-ENVFALLMPTKFSNQENLNDALKLCQEL 82 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 KY ++ I D++ F S+ E G N +RIR ++L S KA+++ TS Sbjct: 83 NLKYKIIEIQDILEAFLK-QSENTDELSRG----NFAARIRMSLLYDYSALKKALVVGTS 137 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE+ +GYGT+YGD++ FNP+ +LYK++++ LA + N + ++ Sbjct: 138 NKSELLLGYGTIYGDLAYAFNPIGELYKSEIYGLARYLN--------------LNEKFIQ 183 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 K+PSA+L Q+D++ L Y ++D +K + EN++ Sbjct: 184 KAPSADLWIGQSDEKDLGFSYELIDKGLKAL-ENQD 218 >gi|297627440|ref|YP_003689203.1| glutamine-dependent NAD(+) synthetase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923205|emb|CBL57799.1| Glutamine-dependent NAD(+) synthetase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 708 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 140/595 (23%), Positives = 240/595 (40%), Gaps = 123/595 (20%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANR---QGMDLILFTELFISGYPPEDLVFKKSF 62 ++A A N + D A N A R E A R G +I F EL ++GY +DL+ + + Sbjct: 17 RVAAATSNTAIADPATN---ATRVIEHARRIAATGASVIAFPELCLTGYAIDDLLLQDTV 73 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + A A+ T+ T D A I+VG P ++ + N V+L G+++ V K LP Y E Sbjct: 74 LDAALDALHTVADATRDLAALIIVGAPLRNGSRLFNCAVVLHHGDVLGVVPKSYLPTYRE 133 Query: 123 FHEKRTFISGY------------------------SNDP--------------------- 137 F+E+R F G +NDP Sbjct: 134 FYERRHFADGADQGGVIDLGAHHPATENVGTDHRDANDPGAQAGEGPSDAADHLVVPFGP 193 Query: 138 -IVFR-----DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV 191 ++FR D+ + + +CED+W GA L ++++SP K ++RH + Sbjct: 194 DLIFRADDLPDLAVHVEVCEDVWVPVPPSSLAALGGATVLVNISSSPITVGKAEQRHLLC 253 Query: 192 TGQISHVHLPIIYVNQVGGQ--DELIFDGASFCFDGQQQLA------------------- 230 S +Y G+ +L +DG + ++ + LA Sbjct: 254 RSTSSRNLAAYVYCAAGLGEPTTDLSWDGQTMIYENGRLLAETERFPTTPGESIADIDLD 313 Query: 231 -FQMKHFSEQNF---------------------MTEWHYDQQLSQWNYMSDDSASTMYIP 268 + + E F T+ + L ++ ++ D A Sbjct: 314 LLRQERLREGTFDDNARHERPAMRTIGFTLHPPRTDLGLRRPLERFPFVPSDPARLN--- 370 Query: 269 LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQT 323 Q+ YN V +L + KV+IG+SGG+DS L AA A+D G + ++ T Sbjct: 371 -QDCYEAYNIQVSALSQRLAAIGGAKVVIGISGGLDSTQALLVAARAMDLAGRPRTDILT 429 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 +P TS + +A ++ALG ++ L I + L + + EN+Q Sbjct: 430 FTMPGFATSAHTRNNAVELSQALGTTFETLDIRPAAEQMLRDLGHPLDD--YDVTYENVQ 487 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLAS 442 + +R + L ++N ++L T + SE+++G+ T GD + + KT + L Sbjct: 488 AGLRTDYLFRIANQRGGIVLGTGDLSELALGWATYGVGDQMSHYAVNCGVPKTLMQHLIR 547 Query: 443 WRNSHG-ITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLPPYPILD 490 W + G +G + + SIL+ S EL P Q+ Q+++ PY + D Sbjct: 548 WVIASGQFDDRVGRVLQ----SILDTEISPELIPVAEGAKPQSTQDTIGPYALHD 598 >gi|166031131|ref|ZP_02233960.1| hypothetical protein DORFOR_00816 [Dorea formicigenerans ATCC 27755] gi|166028978|gb|EDR47735.1| hypothetical protein DORFOR_00816 [Dorea formicigenerans ATCC 27755] Length = 639 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 145/615 (23%), Positives = 252/615 (40%), Gaps = 94/615 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N + + +EA G +I+F EL I+GY DL + + Sbjct: 6 IKVAAATPDIRVADVDYNKGQIIKQMDEAAEAGAKIIVFPELCITGYTCSDLFLQDILLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ + T + A + VG P + N L+ GNI+ K LPNY EF+ Sbjct: 66 SAKKALVEIAEHTKNLDALVFVGVPIAVGGELYNVAAALNHGNILGFTTKSFLPNYGEFY 125 Query: 125 EKRTFISGYSN-DPIVF--RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E R F G + I+F ++I G ICED+W + Sbjct: 126 EMRQFRPGPKKAEKILFGGKEIPFGPQLLFVENQMANLIVSAEICEDVWSPVPPSIEAAR 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R +++GQ + + IY N G+ +L+F G + Sbjct: 186 EGATVIVNCSASDETIGKASYREALISGQSARLISGYIYANAGEGESTTDLVFGGHNLIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW-------------------------NYMS 258 + LA + K FS TE+ + ++ ++ Sbjct: 246 ENGTILA-EAKRFSNGIIYTEFDVQKIANERRKNTTFTETQEHVLPRIPFGLEQTETILT 304 Query: 259 DDSASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC--- 308 S ++P ++E C + L+ + + ++G+SGG+DS L Sbjct: 305 RTFPSRPFVPRDDQE-RAKRCEEILTIQAMGLKKRLAHTHAKSAVVGISGGLDSTLALLV 363 Query: 309 AAIAVDALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A A DALG E + + +P T+ ++ ++A + +G + I D V F + Sbjct: 364 TAKAFDALGLERSGITAVTMPCFGTTDRTYQNACKMSLKVGATLREVRIGDAVMQHFKDI 423 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 Q+ + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 424 GHDPQDH--SVTYENSQARERTQVLMDIANQTGGLVIGTGDMSELALGWATYNGDHMSMY 481 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L + + T L EV+ +L+ S EL P Q + Sbjct: 482 GVNASVPKTLVRHLVHY---YADTCEDSSLKEVL-YDVLDTPVSPELLPPKDGEIAQKTE 537 Query: 481 ESLPPYPILDDI-------------IKRIVENEESFINNDQEYNDETV----RYVEHLLY 523 + + PY + D I RI + ++ EY+DET+ R + Sbjct: 538 DLVGPYELHDFFLYYFLRMGYEPGKIYRIAK-----LSFAGEYDDETIYKWLRTFCWRFF 592 Query: 524 GSEYKRRQAPVGTKI 538 ++KR P G K+ Sbjct: 593 SQQFKRSCLPDGPKV 607 >gi|320530662|ref|ZP_08031708.1| NAD+ synthetase [Selenomonas artemidis F0399] gi|320137070|gb|EFW29006.1| NAD+ synthetase [Selenomonas artemidis F0399] Length = 554 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 34/314 (10%) Query: 202 IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS 261 ++YVN +G QD + FDG ++ +T Y++ L+ + D + Sbjct: 160 VVYVNALGVQDT---GKTVYAFDG----VCRVYRADGAPVLTSAPYEEGLT----VVDTT 208 Query: 262 ASTMYIPLQEEEA---DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK 318 T P EE + Y ++R ++++ + +V++G+SGGIDSA+ AA+ VDA+G Sbjct: 209 QLTSLAPAVEETSIAPVYRTLRYAVRKFLERIHMERVVVGISGGIDSAVSAALYVDAIGA 268 Query: 319 ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---- 374 + V + +P ++ S + AA A+ LGC+ ++PI + V + + +S+ E Sbjct: 269 DRVLLVNMPSRFNSETTKGLAARLAENLGCRSMIVPIEESVAYTAAQLSEIPIEGAAATP 328 Query: 375 ------SGIVAENIQSRIR-GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 S V EN+Q+R R G +L +++ A NK+E +VGY TLYGD++G Sbjct: 329 GEHLTISSFVRENMQARNRSGRVLSSIAAAWGAGFTCNGNKAECTVGYATLYGDLAGFLA 388 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESLPP- 485 L DL+K QV+ LA + N+ E IP I++ PSAEL Q D+ P Sbjct: 389 ALADLWKYQVYDLARYLNAEVYGR------EAIPQGIIDIVPSAELSDAQNVDEGKGDPI 442 Query: 486 -YPILDDIIKRIVE 498 YP D + + E Sbjct: 443 RYPYHDYLFRAFAE 456 >gi|225181299|ref|ZP_03734744.1| NAD+ synthetase [Dethiobacter alkaliphilus AHT 1] gi|225168079|gb|EEG76885.1| NAD+ synthetase [Dethiobacter alkaliphilus AHT 1] Length = 682 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 148/566 (26%), Positives = 236/566 (41%), Gaps = 85/566 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+A V D A N + EEA Q L LF EL IS Y EDL +++ ++ Sbjct: 13 IRVAVAVPEVRVADPAFNATHTIQLAEEAAAQRAVLTLFPELGISAYTNEDLFHQQALLE 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + I L +T + +VVG P + N ++L G I+ + K LPNY EF+ Sbjct: 73 STEREIKRLLRETSFLDSILVVGAPVLVDSSLYNCGLVLHRGQILGIVPKTYLPNYREFY 132 Query: 125 EKRTFIS------------GYSNDPI---VFRDIR------LGILICEDIWKNSNICKHL 163 E R F S G P + ++R + +CED+W + Sbjct: 133 EGRHFRSPDTTTRNTIEYCGQEEIPFGTDLLFNVRNIPNFIFALELCEDLWVPAPPSSFA 192 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L A+ K R+ +V+ Q + +Y G+ +L +DG + Sbjct: 193 ALAGATVIANLTATNLTIGKADYRNALVSNQSARCLCGYMYSAAGPGESTTDLAWDGQAL 252 Query: 222 ------C------FDGQQQLAFQ-------MKHFSEQNFMTE-------------WHYDQ 249 C FD + +L + + + QN TE H D Sbjct: 253 IYEAGECLSKSSRFDLESRLTYSEIDLDKLVMERTRQNSFTENARVLSDYQRFRTVHCDI 312 Query: 250 QLSQWNYM-SDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGG 302 QL+ + + ++P E++ D YN V L +Q +IIG+SGG Sbjct: 313 QLTDGELLLTRQYPRFPFVPSGEKDRDRNCYDAYNIQVHGLVKRLQYTKSETIIIGISGG 372 Query: 303 IDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS L AA A D LG +E ++ +P TS ++ E+A KALG + L I Sbjct: 373 LDSTQSLLVAAKAADMLGWPRERIRAYTMPGFATSSRTKENAWRLIKALGVYGEELDIRP 432 Query: 358 LVNHFFSLMSQFLQEEPSG------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 N LM + SG + ENIQ+ R + L L+N K ++L T + SE+ Sbjct: 433 ACN----LMLSDIGHPASGGTGDYDVTYENIQAGQRTSTLFRLANMHKGIVLGTGDLSEL 488 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG------LGPLTEVIPPSI 464 ++G+ T GD +N + KT + L W+ G L L+ I P + Sbjct: 489 ALGWTTYGVGDHMSHYNVNGSVPKTLIQYLLRWQTVPGRVDEDTRNVLLDILSTEISPEL 548 Query: 465 LEKSPSAELRPHQTDQESLPPYPILD 490 + A+ +P Q ++ + PY + D Sbjct: 549 VPGKSDAD-QPSQRTEDFIGPYELQD 573 >gi|291286023|ref|YP_003502839.1| NAD+ synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290883183|gb|ADD66883.1| NAD+ synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 270 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 90/269 (33%), Positives = 149/269 (55%), Gaps = 22/269 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ +K F V++GLSGGIDSAL AA+A ALG + V +PYK +S +SLEDA Sbjct: 16 IKEETEKIGFENVVLGLSGGIDSALSAALAAKALGGDRVYAYCMPYKLSSKESLEDAIKV 75 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A A ++V+ I +V+ + + + S + N+ +R R L +S ++ Sbjct: 76 ANAFKLNFEVIEITPMVDPYID-----MNPDMSKLRMGNVMARQRMICLFDMSAKVAGLV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L TSNK+E+ +GYGT YGD++ NP+ DLYKTQV++L+ + LG IP Sbjct: 131 LGTSNKTELLLGYGTWYGDLASALNPIGDLYKTQVWELSEY---------LG-----IPE 176 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-YNDETVRYVEH 520 S++ K P+A+L QTD++ L Y D+++ ++V+ +E + + V V Sbjct: 177 SVIVKQPTADLWVGQTDEQELGFTYRQADELLYKMVDERVRTSELIEEGFASDFVNNVYE 236 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 + +++KRR + K++ ++ GRD Y Sbjct: 237 RIRRNQFKRRTTVIA-KVSQRTIGRDFRY 264 >gi|323529669|ref|YP_004231821.1| NAD+ synthetase [Burkholderia sp. CCGE1001] gi|323386671|gb|ADX58761.1| NAD+ synthetase [Burkholderia sp. CCGE1001] Length = 682 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 135/552 (24%), Positives = 233/552 (42%), Gaps = 86/552 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A V D N + R +EA +QG L++F EL IS Y +DL +++ + A Sbjct: 15 RVAVAVPVCRVADPQFNAKETLRLAQEAAQQGAVLVVFPELGISAYTCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +AI + + + + A +V+G P + + + N +++ G + V K LPNY EF+E Sbjct: 75 CETAIGEIVAASTNIPAVLVIGAPLKIEHKLFNCALVISNGKLCGVVPKSYLPNYGEFYE 134 Query: 126 KRTFISGYSNDPI--------------VFRDI------RLGILICEDIWKNSNICKHLKK 165 R F + + + D+ R I ICED+W Sbjct: 135 ARQFSAAENASSTHVTLCGQQAPFSASLLFDVPDAPLFRFHIEICEDVWVPVPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V Q + +Y + G+ +L +DG + + Sbjct: 195 AGATVLVNLSASNIVIGKSAYRHQLVGQQSARCLSAYLYSSAGRGESTTDLAWDGQALIY 254 Query: 224 DGQQQLA-----FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------STMYIPLQ 270 + + LA H + E +++ Q + T+ +P+ Sbjct: 255 ENGELLAESERFLDTSHIIYGDVDLERLSRERMRQTTFAQSTRRHAGEVARFQTVSVPVA 314 Query: 271 EEEAD----------------------------YNACVLSLRDYVQKNNFHKVIIGLSGG 302 +A+ YN V L + N KV+IG+SGG Sbjct: 315 LPDAEHLPLMRAINRFPYVPSNPATRDERCAEVYNIQVQGLLQRLGAANISKVVIGVSGG 374 Query: 303 IDSA---LCAAIAVD--ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLP 354 +DS L A A+D L + ++ +P TS ++L+ A +A+GC + D+ P Sbjct: 375 LDSTQALLVCAKAMDRLKLPRSHILGYTMPGFATSSRTLQQAKDLMQAVGCSMEEIDIRP 434 Query: 355 -----IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + DL +H FS E+ + EN+Q+ R + L L+N +A+++ T + S Sbjct: 435 SCMQMLKDL-HHPFS-----AGEKQYDVTFENVQAGERTSHLFRLANFHQAIVIGTGDLS 488 Query: 410 EISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E+++G+ T GD ++ + KT + L W G +G + IL Sbjct: 489 ELALGWCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESG---QVGEAGSHVLEQILATE 545 Query: 469 PSAELRPHQTDQ 480 S EL P + D+ Sbjct: 546 ISPELVPGKVDK 557 >gi|326201138|ref|ZP_08191010.1| NAD+ synthetase [Clostridium papyrosolvens DSM 2782] gi|325988706|gb|EGD49530.1| NAD+ synthetase [Clostridium papyrosolvens DSM 2782] Length = 642 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 149/632 (23%), Positives = 261/632 (41%), Gaps = 113/632 (17%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ++ +LK+A N AG I KA R E +G ++F EL ++ Y DL + Sbjct: 11 IVPELKVANCDFN------AGEIIKAVRTAEN---EGAQFVVFPELAVTSYTCGDLFLQT 61 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + S+++ + S+T I+VG P + N V++ G+I+ V K +PNY Sbjct: 62 TLQKRALSSLEVIISETAHMECVIIVGMPLTLDSRLYNCAVVIKNGSILGVVPKCYIPNY 121 Query: 121 SEFHEKRTFISGYSN--------------------DPIVFRDIRLGILICEDIWKNSNIC 160 SEF+E R F SG + + GI ICED+W Sbjct: 122 SEFYEARWFSSGLDKPAETVNILGKTVPFGIDLLFEAANMEGLCFGIEICEDLWVPIPPS 181 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 + GA LF+L+AS K + R E++ Q + +Y + + +L+F G Sbjct: 182 SNQALNGATLLFNLSASNDIVGKHEYREELIKMQSAKCAAAYVYASSGPNESTTDLVFGG 241 Query: 219 AS--------------FCFDGQ--------QQLAFQ------MKH------FSEQNFMTE 244 S F FD + Q+L + KH F + F Sbjct: 242 HSLISEYGSVLARTERFSFDEKMIISDIDIQRLVNERFKNSAFKHNTNDMVFRKVLFCVA 301 Query: 245 WHYDQQLSQW-----NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 H +L +W SD +A + E +N L ++ +K +IG+ Sbjct: 302 EHKTGKLQRWIDPHPFVPSDPNARN-----KRCEEIFNIQTSGLGKRLKHTGLNKCVIGI 356 Query: 300 SGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + V D LG ++N+ + +P TS +L ++ + + + Sbjct: 357 SGGLDSTLALLVIVKTYDRLGLDRKNIHAVTMPGFGTSSNTLGNSLELMRLMNVTTHRID 416 Query: 355 IHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I + + HF + L+ + + EN+Q+R R ILM ++N +++ T + SE+++ Sbjct: 417 IKEACLKHFEDIGHDPLKYD---VTYENVQARERTQILMDMANKIGGLVIGTGDLSELAL 473 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 G+ T GD + + KT V L W + + + + S+L+ S EL Sbjct: 474 GWATYNGDHMSMYAVNSGVPKTLVKYLVQWCADYLFNNDI----RNVLLSVLDTPISPEL 529 Query: 474 RP-------HQTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQEYNDETV 515 P Q ++ + PY + D + +V E++F +Y + T+ Sbjct: 530 LPTDKEGCIQQKTEDIVGPYELHDFYLYHLVRYGAEPDKIYKLAEQAF---SGKYENATI 586 Query: 516 -RYVEHLL---YGSEYKRRQAPVGTKITAKSF 543 +++E L + ++KR P G K+ + S Sbjct: 587 KKWLETFLRRFFSQQFKRSCLPDGPKVGSISL 618 >gi|303244613|ref|ZP_07330946.1| NAD+ synthetase [Methanothermococcus okinawensis IH1] gi|302485039|gb|EFL47970.1| NAD+ synthetase [Methanothermococcus okinawensis IH1] Length = 254 Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 84/218 (38%), Positives = 122/218 (55%), Gaps = 16/218 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 + + V+ N + V++GLSGGIDS+L A + V ALGK+ V I++P K ++P E A Sbjct: 14 VNNMVKNANANGVVVGLSGGIDSSLVATLCVKALGKDKVLGIIMPEKNSNPMDKEHAELI 73 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK LG KY + I D++ F + E + + N++ RIR IL +N + ++ Sbjct: 74 AKKLGIKYIISDITDILKAFGA-GGYVPTREFNKLADGNLKPRIRMCILYYFANKNNLLV 132 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSNKSEI +GYGT YGD+ F + +L+KT+V +LA + LG IP Sbjct: 133 AGTSNKSEIYMGYGTKYGDLGSDFLLIGNLFKTEVRELAKY---------LG-----IPN 178 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN 499 I+ K+PSA L QTD+ L Y +LD I+ RI N Sbjct: 179 EIINKAPSAGLWEGQTDEAELGISYELLDKILIRIEHN 216 >gi|225026303|ref|ZP_03715495.1| hypothetical protein EUBHAL_00544 [Eubacterium hallii DSM 3353] gi|224956367|gb|EEG37576.1| hypothetical protein EUBHAL_00544 [Eubacterium hallii DSM 3353] Length = 647 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 142/616 (23%), Positives = 242/616 (39%), Gaps = 95/616 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ +A ++ V + N K ++A++ G+ L++F EL ++ Y DL +K+ + Sbjct: 10 LKVGVASVDVEVANPIHNKEKVMEVIKKADKNGVKLLVFPELVLTAYTCNDLFLQKTLLD 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + +T IV+G P + N V G I+ V K LPNYSEF+ Sbjct: 70 EAKNQLFAILEETKGQDMVIVLGLPLTVNHKLYNCAVFAQGGKILGVVPKHYLPNYSEFY 129 Query: 125 EKRTFISGYSNDPIVFRDIRL-----------------------GILICEDIWKNSNICK 161 E R F G R IRL G ICED+W Sbjct: 130 EARHFAPGEEE----VRKIRLGGKDVPFGMNLLFCCENMEELVIGCEICEDLWCPLPPST 185 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFD 217 H GA + + +AS K R +V+ Q L Y+ G+ E L++ Sbjct: 186 HHALAGATVICNPSASDETTTKDTYRRNLVSQQ--SARLVCAYLYSCAGEGESTQDLVYS 243 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS-------DDSASTMYIPLQ 270 G + + L + + F TE + + M+ D + +Y L+ Sbjct: 244 GHNMIAEYGSILK-ESRRFQNSYIETEIDLQRLEADRRRMTTFVTEGADKNYERVYFRLK 302 Query: 271 EEEADYN------------------AC-------VLSLRDYVQKNNFHKVIIGLSGGIDS 305 EE + + C + L+ + + ++G+SGG+DS Sbjct: 303 EERTELSRYFERTPFIPSNKIDREKRCDEILTIQAMGLKKRLAHTHCQSAVVGISGGLDS 362 Query: 306 ALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + A + +EN+ + +P T+ ++ +A K LG + I+ V Sbjct: 363 TLAVLVTARAFDMLKIPRENIVCVTMPCFGTTDRTYSNAVTLTKKLGASLREIRINKAVE 422 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 FS + E + EN Q+R R ILM ++N + M++ T + SE+++G+ T G Sbjct: 423 QHFSDIGH--DPEIHNVTYENSQARERTQILMDIANQTNGMVIGTGDMSELALGWATYNG 480 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D + + KT V L + + TS L EV+ IL+ S EL P Sbjct: 481 DHMSMYAVNCSVPKTLVRHLVRY---YADTSEEQELKEVL-LDILDTPVSPELLPPVDGV 536 Query: 476 -HQTDQESLPPYPILDDIIKRIVE----NEESFINNDQEYNDET--------VRYVEHLL 522 Q ++ + PY + D + ++ E+ F Q + +E +R Sbjct: 537 ISQKTEDLVGPYELHDFFLYYMLRFGFHPEKIFRLTRQAFGEEYDVATCYKWLRTFCWRF 596 Query: 523 YGSEYKRRQAPVGTKI 538 + +KR P G K+ Sbjct: 597 FAQHFKRSCLPDGPKV 612 >gi|154492523|ref|ZP_02032149.1| hypothetical protein PARMER_02157 [Parabacteroides merdae ATCC 43184] gi|154087748|gb|EDN86793.1| hypothetical protein PARMER_02157 [Parabacteroides merdae ATCC 43184] Length = 643 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 131/508 (25%), Positives = 218/508 (42%), Gaps = 68/508 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI K +A+ +G+ +I F EL ++GY DL +++ + Sbjct: 6 VKVAAAVPLVQVADCFYNIEKIEGLMRQASEKGVQIIAFPELSVTGYTCLDLFAQQTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ L S+T D +VG P + + ++N+ V+ G I V K LPNY EF Sbjct: 66 GAEAALLQLVSNTADLDILTIVGVPLRTENRLINAAVVFQKGAIRGVVPKTYLPNYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDP----IVFRDIRL--GILICEDIWKNSNICKHLKKQG 167 E+R F S G P ++FR RL GI ICED+W L +G Sbjct: 126 EQRWFTSATELRESTISIGKEEYPMGSHLLFRSGRLTAGIEICEDLWVPVPPSSLLTMEG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANIIFNLSASNELIGKHAYLRSLICQQSARCMAGYVYASSGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLA----FQMKH---FSEQNFMTEWHYDQQLSQWNY------------------MSDD 260 LA F M+ SE + T + Q + + Y +SD Sbjct: 246 GNLLAESPRFTMEEQLVISEIDIETLQNDRQVNTSFMYGTSGLPKEKAQVVDFQVRISDG 305 Query: 261 SASTM------YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 + T + P E E ++ V L + + ++G+SGG+DS L Sbjct: 306 FSLTRPVDPHPFTPSGEALKERCEEIFHIQVAGLAKRLVHAHAQTAVVGISGGLDSTLAL 365 Query: 310 AIAV---DALGKENVQT--IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + V DAL Q I +P T+ ++ +A ++LG +PI + + HF Sbjct: 366 LVTVMTFDALKMPRGQIIGITMPGFGTTDRTYTNACDLIRSLGVTLKEIPIKEACLQHF- 424 Query: 364 SLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + + +PS + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 425 ----RDIDHDPSVHDVTYENSQARERTQLLMDVANQKNGLVIGTGDLSELALGWATYNGD 480 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGI 449 + + KT V L W +H + Sbjct: 481 HMSMYGVNGSIPKTLVKYLVEWVANHKV 508 >gi|225568608|ref|ZP_03777633.1| hypothetical protein CLOHYLEM_04685 [Clostridium hylemonae DSM 15053] gi|225162536|gb|EEG75155.1| hypothetical protein CLOHYLEM_04685 [Clostridium hylemonae DSM 15053] Length = 640 Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 137/609 (22%), Positives = 246/609 (40%), Gaps = 82/609 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+A N + R EE +G +I+F EL ++GY DL + + Sbjct: 6 VKVAAATPDIRVADVAYNTEQICRLIEETADEGAKIIVFPELCVTGYTCGDLFTQDILLT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 SA+ + D A + VG P + N L+ G ++ + K LPNY EF+ Sbjct: 66 DARSALHRIAGFAKDKDALVFVGLPLSVDGELYNVAAALNRGAVLGLTTKTFLPNYGEFY 125 Query: 125 EKRTFISGYSN-------------------DPIVFRDIRLGILICEDIWKNSNICKHLKK 165 E R F G + V + + ICED+W + Sbjct: 126 EMRQFRQGPKEAREILFDGQVIPFGPQLLFESTVMDSLVVSAEICEDVWSPVPPSIEAAR 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R ++ GQ + + +Y N G+ +L+F G + Sbjct: 186 EGATIIVNCSASDETVGKESYRKSLIEGQSARLISGYVYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD----QQLSQWNYMSDDSASTMYIPLQEEEADY--- 276 + L + F +E + ++ + + IP EE D Sbjct: 246 ENGTVLR-SGRRFENGVICSEIDVNRIAGERRKNTTFQTSGERKLFRIPFYIEETDTVLT 304 Query: 277 -----------------NAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC---A 309 C + L+ + ++G+SGG+DS L Sbjct: 305 RTFPSRPFVPGAGEERARRCEEILTIQAMGLKKRLAHARCSSAVVGISGGLDSTLALLVT 364 Query: 310 AIAVDA--LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A A DA L ++ + + +P T+ ++ ++A ++ LG +PI D V+ F + Sbjct: 365 AKAFDALQLSRKGITAVTMPCFGTTDRTYQNACRMSQKLGAVLREVPIADSVSLHFKDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 E + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 425 H--DPEDHSVTFENAQARERTQVLMDIANQTGGLVIGTGDMSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + + T G L ++ +L+ S EL P Q ++ Sbjct: 483 VNASVPKTLVRHLVHY---YADTCGDEELKAIL-YDVLDTPVSPELLPPKDGEIAQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--NEESFINN------DQEYNDETV-RYVEHL---LYGSEYKR 529 + PY + D + ++ E S I + EY++ T+ +++E +G ++KR Sbjct: 539 LVGPYELHDFFLYYMIRFGYEPSKIYRIARLAFEGEYDNITILKWLETFYRRFFGQQFKR 598 Query: 530 RQAPVGTKI 538 P G K+ Sbjct: 599 SCLPDGPKV 607 >gi|182419597|ref|ZP_02950844.1| glutamine-dependent NAD+ synthetase [Clostridium butyricum 5521] gi|237668266|ref|ZP_04528250.1| glutamine-dependent NAD(+) synthetase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376566|gb|EDT74142.1| glutamine-dependent NAD+ synthetase [Clostridium butyricum 5521] gi|237656614|gb|EEP54170.1| glutamine-dependent NAD(+) synthetase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 632 Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 146/623 (23%), Positives = 258/623 (41%), Gaps = 94/623 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A N V D+ NI + EAN +G I+F EL ++ Y DL ++ + Sbjct: 4 IKVASACPNTRVSDVDYNIENILKCITEANEKGCKFIVFPELSVTSYTCGDLFLQEHLLN 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L +T + I VG P + N IL G ++ + K +PNYSEF+ Sbjct: 64 KSYEGIKNLLHNTSNLDMLIAVGAPLISGSILYNCAYILFKGKVLGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGYS------NDPIVFRDIRLG-------------ILICEDIWKNSNICKHLKK 165 EKR F G S N P ++I G + ICED+W +L Sbjct: 124 EKRWFTEGISITNQKVNLPFQ-KEIPFGVDLIFSSNLGNFAVEICEDLWVTIPPSSYLAL 182 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDGASFC 222 GA + +L+AS +K R +++ Q + IY + G + +++F G Sbjct: 183 MGAHIIGNLSASNELVSKADYRRNLISNQSARSICSYIY-SSAGVHESTTDVLFSGHLII 241 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSDDSASTM-------------- 265 + L+ + K F N + + D + + +S AS Sbjct: 242 SENGSLLS-ENKRFQRDNEIIYSYVDVFKLKAERMKNLSFRDASIFLNKTPSMINFQFTN 300 Query: 266 --------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++P EEE D +N SL ++ + K ++G+SGG+DS Sbjct: 301 TEIKGFDRFIDKHPFVPSSEEERDLRCREIFNIQASSLAKRLEHTHSQKAVVGISGGLDS 360 Query: 306 ALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY-DVLPIHDLV 359 L + V L K+N+ TI +P T+ ++ +A + LG ++ + + Sbjct: 361 TLALLVIVKTFELLNLDKKNIVTITMPGFGTTDRTYNNALDLCRELGTDLREINIVKASL 420 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + + + EN+Q+R R ILM L+N +L+ T + SE+++G+ T Sbjct: 421 QHFEDIGH---DKNIHDVTYENVQARERTQILMDLANKENGLLIGTGDLSELALGWCTYN 477 Query: 420 GDMSGGFNPLKDLYKTQVFQLASW---RNSHGITSG--LGPLTEVIPPSILEKSPSAELR 474 GD ++ + KT V L + S+ I S + L + P +L K + ++ Sbjct: 478 GDHMSMYSVNPSIPKTLVRYLVRYVAQNESNEIVSNTLMDILDTPVSPELLPKDSNGQIS 537 Query: 475 PHQTDQESLPPYPILDDIIKRIVEN-----------EESFINNDQEYNDETVRYVEHLL- 522 Q ++ + PY + D + +++ E +F D +E ++++ + Sbjct: 538 --QKTEDIVGPYELHDFFLYHFIKHGSTKERIAFLAEHAF--KDDYSKEEIGKWLDKFMF 593 Query: 523 --YGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ + S Sbjct: 594 RFFTQQFKRSALPDGPKVGSISL 616 >gi|281420249|ref|ZP_06251248.1| putative NH(3)-dependent NAD(+) synthetase [Prevotella copri DSM 18205] gi|281405744|gb|EFB36424.1| putative NH(3)-dependent NAD(+) synthetase [Prevotella copri DSM 18205] Length = 664 Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 145/643 (22%), Positives = 264/643 (41%), Gaps = 112/643 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A VGD+ N + A +G+++I F EL I+GY +DL ++ ++ Sbjct: 6 IKVASAIPAVKVGDVIFNTQQIEEQIALAEGKGVEIITFPELSITGYSCQDLFRQQMLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ L T +VG P + +LN +++ G I+ + K LPNYSEF+ Sbjct: 66 SSEQAVMMLLDFTRKLDIISIVGAPVIAGDLLLNCGIVIQHGQILGIVPKTYLPNYSEFY 125 Query: 125 EKRTFISG---------YSNDPI----------VFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F S Y+ + F ++ G+ ICED+W + L Sbjct: 126 EKRWFASAQDLRDCEVRYAGHKVKLTPDVQIFQTFDGVQFGVEICEDVWAPAPPSNKLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K +++ Q + IY + G+ ++++ G + + Sbjct: 186 AGADLIFNLSASDELIGKHHYLKSLLSQQSARTMTGYIYSSCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFSEQ------------------------NFMTEWHYDQQLSQWNYMSD 259 + L+ Q + FS + N Y Q+N + Sbjct: 246 ENGVLLS-QSERFSIEPQMVISQIDVEKLRSERRTNSTYVNAQRNIKYSVLGGQFNIRNI 304 Query: 260 DSASTM---------------YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ T +IP + E +N ++ L + + V+IG+ Sbjct: 305 EADPTENERDFVLEREVNPHPFIPTSSDMNASCEEIFNIQLMGLAKRIVHTHAKTVVIGI 364 Query: 300 SGGIDSALCAAIAVDALGKENVQT-----IMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + V A K V + +P T+ ++ +A + ++LG + Sbjct: 365 SGGLDSTLALLVCVKAFDKLKVNRKGIVGVTMPGFGTTDRTYNNAISLMQSLGITIKEIS 424 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I V F + Q + EN Q+R R ILM L+N M++ T + SE+++G Sbjct: 425 IAKAVTQHFEDIGQ--DASVHDVTYENSQARERTQILMDLANKMGGMVIGTGDLSELALG 482 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT + L +H SG+ + + I++ S EL Sbjct: 483 WATYNGDHMSMYGVNASIPKTLIRHLV----NHVAESGVDEQSRITLRDIIDTPISPELI 538 Query: 475 P-------HQTDQESLPPYPILDDII-----------KRIVENEESFINNDQE------- 509 P Q ++ + PY + D + K + +++FI+++ E Sbjct: 539 PADENGNIKQKTEDLVGPYELHDFFLYYFLRFGFRPSKIYMLAKKAFIDSELERVKISDN 598 Query: 510 ----YNDETVR-----YVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y++ET++ +V + ++KR P G K+ + S Sbjct: 599 DPDSYDEETIKKWLKTFVRR-FFNQQFKRSCLPDGPKVGSVSL 640 >gi|238024670|ref|YP_002908902.1| NAD synthetase [Burkholderia glumae BGR1] gi|237879335|gb|ACR31667.1| NAD+ synthase [Burkholderia glumae BGR1] Length = 704 Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 154/630 (24%), Positives = 257/630 (40%), Gaps = 114/630 (18%) Query: 18 DIAGNI-AKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 D A N+ A R AR+ A R + IL EL +S Y ++L F+++ + AI L++ Sbjct: 26 DPAANLQATLRLARDAAGRGALVTIL-PELGLSAYTNDELFFQRALLDGVKRAIGKLRAA 84 Query: 77 THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG---- 132 + + IV G P + + N+ V+L G I+ V K LPNY EF+EKR F SG Sbjct: 85 SAELPGLIVAGAPLEWSGRLYNAAVVLHRGRILGVVPKSYLPNYGEFYEKRYFASGLGVT 144 Query: 133 ------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + D ++FR ++ LG+ ICED+W + GA + +L+ Sbjct: 145 GGTLRLDGAEVPFGTD-LLFRADDYPELVLGVEICEDLWAPVPPSTYAAHAGATVIANLS 203 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQM 233 AS K + R V + +Y G+ +L +DG + + + LA + Sbjct: 204 ASNITVGKSEYRRLHVRSHSARCQAAYLYSAAGCGESTTDLAWDGHALVCESGEILA-ET 262 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMS----DDSASTM------------------------ 265 + F++ + D Q + DD A + Sbjct: 263 ERFADTAQLLVADLDLQRIMQERLRVQTFDDCARALGGSAFRNVGFALAPPRGPSGPLQR 322 Query: 266 ------YIPLQEEEADYNACVLS-------LRDYVQKNNFHKVIIGLSGGIDSA---LCA 309 ++P D N C + L ++ +V+IG+SGG+DS L Sbjct: 323 RLDRFPFVPADVAMLDAN-CEETFMIQSHGLAKRLRATGLEQVVIGVSGGLDSTYALLVC 381 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLPIHDLVNHFFS 364 A+ +D LG + N+ LP TS +L++A A LG + D+ P+ D Sbjct: 382 ALTMDRLGLDRRNILAYTLPGYATSRHTLDNAWALMHVLGVSAREIDIKPVSD--RTLAD 439 Query: 365 LMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDM 422 + Q E + EN+Q+ R L L+N ++A+++ T + SE+++G+ T GD Sbjct: 440 IGHPAAQGEARYDVTYENVQAGARSAYLFRLANANRAIVIGTGDLSELALGWCTYGVGDQ 499 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---HQTD 479 +N + KT + Q+ W G I I+E S EL P Q+ Sbjct: 500 MSHYNVNGSVPKTLIQQMVRWLADR---QRFGADAAGILRRIVETEISPELVPGNASQST 556 Query: 480 QESLPPYPILDDIIKRIVE-----NEESFIN----NDQEYNDET---------------- 514 ++++ PY + D + + + +F+ +D E D Sbjct: 557 EQAIGPYALQDFNLYHVTRYGFGPAKIAFLAWHAWHDAEAGDWPPLMDSRPAYDLAAIKR 616 Query: 515 --VRYVEHLLYGSEYKRRQAPVGTKITAKS 542 V +V+ GS++KR P G K+ A S Sbjct: 617 WLVVFVKRFFEGSQFKRSALPNGPKVAAGS 646 >gi|320160187|ref|YP_004173411.1| NH(3)-dependent NAD(+) synthetase [Anaerolinea thermophila UNI-1] gi|319994040|dbj|BAJ62811.1| NH(3)-dependent NAD(+) synthetase [Anaerolinea thermophila UNI-1] Length = 276 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 88/277 (31%), Positives = 145/277 (52%), Gaps = 38/277 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R + + F + +I LSGG+DSA+ +A +ALG +NV + LPY+ +SP+SLE A Sbjct: 22 IRSEIHRMGFERAVINLSGGLDSAVSCFLAAEALGPQNVLALRLPYRTSSPESLEHAQMV 81 Query: 343 AKALGCK---YDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 +A G + +++ P+ D L+ HF E + + NI +R+R +L + Sbjct: 82 IEATGVQSHTFEITPMVDPLIEHF---------PEMNSLRKGNIMARMRMIVLYDQTVAF 132 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 + + T NK+EI +GY TLYGD + NP+ DLYKTQV QLA LG Sbjct: 133 NGLAVGTGNKTEILLGYTTLYGDSACALNPIGDLYKTQVRQLA---------RALG---- 179 Query: 459 VIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE-----YND 512 +P +++K PSA+L QTD+ L Y +D ++ +++ + QE ++ Sbjct: 180 -VPQVVIDKPPSADLWAGQTDEGELGFTYAEVDKLLYLLIDERYT----PQECIEAGFDS 234 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLY 549 V V + +++KR P+ K++ ++ G D LY Sbjct: 235 RFVHAVVERVRKNQFKRMLPPIA-KLSNRTIGYDFLY 270 >gi|294673549|ref|YP_003574165.1| glutamine-dependent NAD+ synthetase [Prevotella ruminicola 23] gi|294471619|gb|ADE81008.1| glutamine-dependent NAD+ synthetase [Prevotella ruminicola 23] Length = 646 Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 137/618 (22%), Positives = 252/618 (40%), Gaps = 83/618 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A A V D+ N+ + +A +G+++++F EL I+GY +DL ++ + Sbjct: 6 VNVAAAVPTVKVADVEYNVQQIESLIAQAEDRGVEVMVFPELCITGYSCQDLFKEQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L T ++VG P + N +L G ++ + K+ LPNY EF+ Sbjct: 66 HAEDGVVKLLDFTRKLNVIVIVGLPVVVNGLLYNCAAVLQGGQLLGIVPKVYLPNYGEFY 125 Query: 125 EKRTFISG----------------YSNDPIVF---RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S S +P VF ++ G+ ICED+W + +L Sbjct: 126 EKRWFASAQDLNATDIYFAGSPVHVSAEPQVFVTADGVKFGVEICEDVWAPTPPSNNLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K ++ Q + + +Y + G+ ++++ G + F Sbjct: 186 AGADVIFNLSASDELIGKHAYLKSLLAQQSARMISGYVYASCGFGESTQDVVYGGNAIIF 245 Query: 224 DGQQQLA----------FQMKHFSEQNFMTEWHYDQQL--SQWNYMSDDSASTM------ 265 + + L +M Q E + +Q N + + A Sbjct: 246 ENGRLLEEGDRFSLLPQIKMCQIDVQALHVERRTNTTFINAQRNAHAREIACKATCQRPF 305 Query: 266 ----------YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 +IP E+ E N V+ L + N K +IG+SGG+DS L Sbjct: 306 ELFRNIDPYPFIPKSEDMQASCEEILNIQVMGLVKRLHHINGKKAVIGISGGLDSTLALL 365 Query: 311 IAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V A L ++ + I +P T+ ++ +A + LG + I V FS Sbjct: 366 VTVKAFDKLGLDRQGIVGITMPGFGTTDRTYNNALKLMETLGVTIREISIAAAVTQHFSD 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 ++ I EN Q+R R ILM ++N A+++ T + SE+++G+ T GD Sbjct: 426 INH--DASVHDITYENSQARERTQILMDVANKENAIVVGTGDLSELALGWATYNGDHMSM 483 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAELRPHQTDQESLP 484 + + KT + L + T L + + I P ++ + ++ Q ++ + Sbjct: 484 YGVNAGVPKTLIRYLVGYVAGEMATDTLMDIIDTPISPELIPADENGNIK--QKTEDLVG 541 Query: 485 PYPILDDII-----------KRIVENEESFINNDQE----YNDETVR----YVEHLLYGS 525 PY + D I K + + +F E Y++ET++ + Sbjct: 542 PYELHDFFIYYFLRYGFSPKKIFLLAKRAFCTATSEKPALYDEETIKKWLTTFCRRFFNQ 601 Query: 526 EYKRRQAPVGTKITAKSF 543 ++KR P G K+ + S Sbjct: 602 QFKRSCLPDGPKVGSVSL 619 >gi|317502930|ref|ZP_07961025.1| NAD synthetase [Prevotella salivae DSM 15606] gi|315665964|gb|EFV05536.1| NAD synthetase [Prevotella salivae DSM 15606] Length = 642 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 128/555 (23%), Positives = 231/555 (41%), Gaps = 76/555 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + + +A QG+++I+F EL I+ Y +DL + + Sbjct: 6 IKVASAIPSVKVGDVNYNTQQIEKLVSKAENQGVEIIVFPELAITSYTCQDLFRQDLLLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + AI +L T +VVG P +LN VI+ G+I+ + K LPNY+EF+ Sbjct: 66 STEEAIQSLLIFTQQLDIIVVVGAPIVVGNLLLNCAVIIQKGHILGIIPKTYLPNYNEFY 125 Query: 125 EKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S P + + ++ G+ ICED+W HL Sbjct: 126 EKRWFASSQDLRPTIISYAGHTLTISAESKLFLTSQGVKFGVEICEDVWAPIPPSNHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV---------NQVGGQDELIF 216 GA+ + +L+A+ K K ++ Q + + +Y + V G + LI+ Sbjct: 186 SGADLILNLSATDELLGKHKYLKSLLAQQSARMISGYVYSSCGFGESTQDVVYGGNALIY 245 Query: 217 DGASFCFDGQQ----------QLAFQMKHFSEQNFMT--------------EWHYDQQLS 252 + + +G++ Q+ + +N T E Y + Sbjct: 246 ENGTLLVEGERFSVDSQLVVTQIDVERLRAERRNNTTFVNAQRAGMLNPNEELCYAIEQK 305 Query: 253 QWNYMSDDSASTMYIPLQEEEAD-----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + ++ + +IP +++ AD +N V+ L + V++G+SGG+DS L Sbjct: 306 KPFHIDRTISPCPFIPEEDDLADSCEEVFNIQVMGLAKRLIHTGCKHVVLGVSGGLDSTL 365 Query: 308 CAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V L ++ + + +P T+ ++ ++A + L + I V Sbjct: 366 ALLVCVRTFDKLKLDRKGIIGVTMPGFGTTDRTYQNAIHLMEKLNISIREISIAKSVTQH 425 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + + I EN Q+R R ILM LSN ++ T + SE+++G+ T GD Sbjct: 426 FEDIGHDMSVH--DITYENGQARERTQILMDLSNQVGGFVIGTGDLSELALGWATYNGDH 483 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------- 475 + + KT + L + + + + P I I+ S EL P Sbjct: 484 MSMYGVNASVPKTLIQHLMRF-----VATTMSPDIASILIDIVNTPISPELLPATQNDSI 538 Query: 476 HQTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 539 SQKTEDLVGPYELHD 553 >gi|154506146|ref|ZP_02042884.1| hypothetical protein RUMGNA_03688 [Ruminococcus gnavus ATCC 29149] gi|153793645|gb|EDN76065.1| hypothetical protein RUMGNA_03688 [Ruminococcus gnavus ATCC 29149] Length = 638 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 131/552 (23%), Positives = 233/552 (42%), Gaps = 76/552 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N + A EEA +++F EL ++GY DL + +Q Sbjct: 6 IKVAAATPDIRVADVPFNTKQICSAIEEAQNNQAKIVVFPELCVTGYTCGDLFTQDVLLQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + T + + VG P + N L G I+ + K LPNY EF+ Sbjct: 66 AAKQALLEITEFTREKDMLVFVGVPLVVDAKLYNVAAALCRGEILGLTTKTFLPNYGEFY 125 Query: 125 EKRTFISG--------YSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F +G ++ + F ++ + ICED+W Sbjct: 126 EMRQFTAGPDVPGEILFNGKKVPFGPGLLFQASSMEELIVSAEICEDVWSPIPPSIRAAM 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R +++ GQ + + IY N G+ +L+F G + Sbjct: 186 EGATVIVNCSASDETIGKDSYRRDLIKGQSARLIAGYIYANAGEGESTTDLVFGGHNLIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTE-----------------WHYDQQLSQWNYMSDDSASTM- 265 + LA ++K F Q TE ++ L + ++ D + + Sbjct: 246 ENGSILA-ELKRFENQIIYTELDIKRIVGERRKNTTFTMEKEKVLPRISFPLDVCETKLT 304 Query: 266 -------YIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC--- 308 ++P E+E C + L+ + + + ++G+SGG+DS L Sbjct: 305 REFPKKPFVPQDEKERALR-CEEILTIQAMGLKKRLLHTHANTAVVGISGGLDSTLALIV 363 Query: 309 AAIAVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A A D +GK+ + I +P T+ ++ +A A+ LG + I D V SL Sbjct: 364 TAKAFDMIGKDKKEILAITMPCFGTTDRTYRNACKMAEQLGATLREVKIADSV----SLH 419 Query: 367 SQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 Q + +P + EN Q+R R +LM ++N + M++ T + SE+++G+ T GD Sbjct: 420 FQDIGHDPKDHSVTYENAQARERTQVLMDIANATNGMVIGTGDMSELALGWATYNGDHMS 479 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQT 478 + + KT V L + + +T+ P + + +L+ S EL P Q Sbjct: 480 MYGVNASVPKTLVRHLVKY--AADVTA--DPKLQEVLYDVLDTPVSPELLPPKDGDIAQK 535 Query: 479 DQESLPPYPILD 490 ++ + PY + D Sbjct: 536 TEDLVGPYELHD 547 >gi|300727137|ref|ZP_07060556.1| glutamine-dependent NAD+ ligase [Prevotella bryantii B14] gi|299775681|gb|EFI72272.1| glutamine-dependent NAD+ ligase [Prevotella bryantii B14] Length = 666 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 126/486 (25%), Positives = 208/486 (42%), Gaps = 71/486 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A N VGDI N + +A +G+++++F EL I+GY +DL ++ ++ Sbjct: 6 IKVASAVPNVKVGDIEYNTHEIESIIAQAEGKGVEIVVFPELSITGYSCQDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +AI L T +VG P +LN V++ G I+++ K LPNYSEF+ Sbjct: 66 ASENAILMLLDFTRKLDIIAIVGAPVAANGLLLNCGVVIQKGQILSIVPKTYLPNYSEFY 125 Query: 125 EKRTFISG----------------YSNDPIVFRD---IRLGILICEDIWKNSNICKHLKK 165 EKR F S + D +FR ++ GI +CED+W + L Sbjct: 126 EKRWFASAQDLKNMSIRYAGHTLQLTPDVQLFRTADGVQFGIEVCEDVWAPAPPSNKLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV---------NQVGGQDELIF 216 GA+ +F+L+AS K ++ Q + IY + V G + LI+ Sbjct: 186 AGADLIFNLSASDELIGKHAYLKSLLAQQSARTMTGYIYSSCGFGESTQDVVYGGNALIY 245 Query: 217 DGASFCFDGQQ-QLAFQM--------KHFSEQ-------NFMTEWHYDQQLSQWNYMSDD 260 + +G + ++ QM K SE+ N Y + Q+ + D Sbjct: 246 ENGQLLEEGDRFSVSSQMVVSQIDVEKLRSERRTNSTYVNAQRNIKYSELNGQFAIRTID 305 Query: 261 SASTMYI------------PLQEEEADYNAC--------VLSLRDYVQKNNFHKVIIGLS 300 + S+ I P +D NA + L + + V+IG+S Sbjct: 306 AKSSDIIHDFKLERKVNAHPFIPTSSDMNASCEEIFNIQTMGLAKRLVHTHCKTVVIGIS 365 Query: 301 GGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L + D LG ++ + + +P T+ ++ +A + LG + I Sbjct: 366 GGLDSTLALLVCCRTFDRLGLDRKGIVGVTMPGFGTTDRTFNNAISLMNGLGITIREISI 425 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 V F + + I EN Q+R R ILM LSN M++ T + SE+++G+ Sbjct: 426 AKSVTQHFEDIGHDISVHD--ITYENGQARERTQILMDLSNQLGGMVIGTGDLSELALGW 483 Query: 416 GTLYGD 421 T GD Sbjct: 484 ATYNGD 489 >gi|119356641|ref|YP_911285.1| NAD synthetase [Chlorobium phaeobacteroides DSM 266] gi|189030354|sp|A1BEN4|NADE_CHLPD RecName: Full=NH(3)-dependent NAD(+) synthetase gi|119353990|gb|ABL64861.1| NH(3)-dependent NAD(+) synthetase [Chlorobium phaeobacteroides DSM 266] Length = 277 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/267 (32%), Positives = 143/267 (53%), Gaps = 26/267 (9%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 ++K F V++GLSGGIDSA+ +A ALG + V +M+PY+ +S S+ A + L Sbjct: 25 IRKFGFRSVVLGLSGGIDSAVVCELASRALGSDQVLALMMPYRSSSTDSIVHAQLLVEKL 84 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G + + I V+ FF + E + NI +R R L +S ++++ TS Sbjct: 85 GIRAETCSITAAVDAFFEGVP-----EEDRLRRGNIMARTRMVYLYDVSARQNSLVVGTS 139 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NK+E+ +GYGTL+GDM+ NP+ DLYKTQ+ G+ LG IP ++ Sbjct: 140 NKTELLLGYGTLFGDMASAVNPVGDLYKTQI---------RGLARHLG-----IPEQLIT 185 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVE---NEESFINNDQEYNDETVRYVEHLL 522 K+PSA+L Q+D+ L Y +D ++ ++E ++ + I +Q ++ V ++ Sbjct: 186 KTPSADLWEGQSDEADLGFSYDEVDHLLFMMLEKRMDKAAII--EQGVSEIFYDRVRKMV 243 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLY 549 ++YK R PV KI++++ G D Y Sbjct: 244 VRNQYK-RMMPVIAKISSRTPGIDFRY 269 >gi|256752430|ref|ZP_05493289.1| NAD(+) synthase (glutamine-hydrolyzing) [Thermoanaerobacter ethanolicus CCSD1] gi|256748699|gb|EEU61744.1| NAD(+) synthase (glutamine-hydrolyzing) [Thermoanaerobacter ethanolicus CCSD1] Length = 200 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 106/198 (53%), Gaps = 12/198 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINTAKYQKADLVVFPELATVGYPPKDFLFMQDFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 A I+ + + G+++G RQD EG L NS + G I+ + DK LPNY F Sbjct: 61 ANEKYINEIVL-PNTNQIGVILGTVRQDTEGNLYNSAFFIYEGEIVEIFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEFLFS 173 EKR F F+ I+LG+ ICEDIWK+ ++ + K + + Sbjct: 120 DEKRYFKPAQLRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQFKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIV 191 ++ASPYY K R E++ Sbjct: 180 ISASPYYLGKENMRVEMI 197 >gi|220922842|ref|YP_002498144.1| NAD synthetase [Methylobacterium nodulans ORS 2060] gi|219947449|gb|ACL57841.1| NAD synthase [Methylobacterium nodulans ORS 2060] Length = 679 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 129/508 (25%), Positives = 211/508 (41%), Gaps = 81/508 (15%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 + + A N+A+ + QG+ + +F EL +S Y EDL+ +++ + +A+ TL Sbjct: 22 IAEPAANVAEVLALARRCHDQGVAVAVFPELCLSAYAIEDLLLQETLLDGVEAAVATLAE 81 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 T D +VVG P + V N+ V+L G ++ V K LPNY EF+EKR F G Sbjct: 82 GTRDLLPLLVVGAPLRHGHRVYNTAVMLHRGRVLGVVPKSYLPNYREFYEKRHFAPGAG- 140 Query: 136 DPIVFRDIRL-----------------------GILICEDIWKNSNICKHLKKQGAEFLF 172 I IRL G+ +CED+W GA L Sbjct: 141 --ITGETIRLAGAAIPFGTDLLFAAEDLPGLVIGVDVCEDMWIPVPPGALAALAGATVLV 198 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQQQ 228 +L+ SP + + R + Q S V Y+ G E L +DG + ++ Sbjct: 199 NLSGSPITIGRAESRKLLC--QSSSVRCLSAYIYAAAGPGESTTDLAWDGQTAIYEDGTL 256 Query: 229 LAFQMKHFSEQNFMTEWHYD-----QQLSQWNYMSDDSASTM------------------ 265 LA + + F + +T D Q+ +Q D++ + + Sbjct: 257 LA-ESERFPDGPQVTVADIDLDRLRQERAQMGSFDDNARAVLGERPWRRIAFTVAPPRHD 315 Query: 266 -----------YIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA-- 306 ++P Q+ YN V L ++ KV+IG+SGG+DS Sbjct: 316 LGLARTVERFPFVPADPARLAQDCYEGYNIQVAGLAQRLRAIRTSKVVIGISGGLDSTHA 375 Query: 307 -LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + AA A D LG + N+ T +P TS ++ +A +LG L I Sbjct: 376 LIVAAKAFDRLGLPRTNILTYTMPGFATSAETKGNAHRLMASLGTTATELDIRPAARQML 435 Query: 364 SLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YG 420 + M F + EP + EN+Q+ +R + L L+N + A+++ T + SE+++G+ T G Sbjct: 436 TDMGHPFGRGEPVYDVTFENVQAGLRTDFLFRLANQNDAIVVGTGDLSELALGWCTYGVG 495 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHG 448 D + + KT + L W S G Sbjct: 496 DQMSHYAVNAGVPKTLIQHLIRWVVSSG 523 >gi|95930747|ref|ZP_01313480.1| NAD+ synthetase [Desulfuromonas acetoxidans DSM 684] gi|95133227|gb|EAT14893.1| NAD+ synthetase [Desulfuromonas acetoxidans DSM 684] Length = 651 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 129/562 (22%), Positives = 226/562 (40%), Gaps = 70/562 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++A+A + + D+ N + A A +QG ++F EL ++GY DL F+ ++ Sbjct: 12 FRLAVASVEHRIADLEFNAEQITSAALRAKKQGCHCVVFPELSLTGYGCGDLFFQSILLE 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + LK T ++VG P + N V++ G I+ V K LPN EF+ Sbjct: 72 RTRQVLGDLKKMTRHEQMILIVGAPIAQGGRLFNCAVVISGGEILGVVPKNFLPNTQEFY 131 Query: 125 EKRTFISGYS---------------NDPIVFRD-----IRLGILICEDIWKNSNICKHLK 164 E+R F + D ++FR LG+ ICED W + + Sbjct: 132 EERWFSAAADRTADEISLCGAMVPFGDDLLFRQKELPGCVLGVEICEDGWVANPPSGQMA 191 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+ASP K R ++V Q + Y + G+ +L+F G S Sbjct: 192 VAGATVLVNLSASPEILGKQDYRRQLVQSQSARCLAAYAYASAGPGESSTDLVFSGHSLI 251 Query: 223 FDGQQQLAFQMK-HFSEQNFMTEWHYDQQLSQW---NYMSDDSASTMY------------ 266 + Q LA + F+ Q + + D+ ++ N + SA Y Sbjct: 252 AENGQLLAETERFSFATQLAIGDVDIDRLYNERHKNNSFAASSAQNAYRKIEFNCAEHAH 311 Query: 267 ------------IPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 +P E D + +L + V+IG+SGG+DS L Sbjct: 312 TPLHRPLPCHPFVPANLNERDQRCEEIFALQTTALAKRLNHIGVRNVVIGISGGLDSTLA 371 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V A K + + + +P T+ ++ +A + LG + ++ I V F Sbjct: 372 LLVTVKAFEKLDLDPQGITAVTMPGFGTTTRTRGNAESLIDLLGAQCRIISIDAAVRQHF 431 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + E I EN Q+R R +LM ++N +++ T + SE+++G+ T D Sbjct: 432 ADIGH--DESVHNITYENSQARERTQLLMDIANQVGGIVIGTGDLSELALGWCTYNADHM 489 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI-----PPSILEKSPSAELRPHQT 478 + + KT V L SW + E I P +L + E+ Q Sbjct: 490 SMYGVNCGVPKTLVRYLVSWCAQASFCGETRRVLEDICATPVSPELLPPDEAGEI--SQV 547 Query: 479 DQESLPPYPILDDIIKRIVENE 500 ++ + PY + D + ++V ++ Sbjct: 548 TEDHVGPYELHDFYLFQVVRHQ 569 >gi|282858831|ref|ZP_06267976.1| NAD+ synthetase [Prevotella bivia JCVIHMP010] gi|282588400|gb|EFB93560.1| NAD+ synthetase [Prevotella bivia JCVIHMP010] Length = 655 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 148/636 (23%), Positives = 261/636 (41%), Gaps = 109/636 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+A+ + A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPSVKVADTQYNLAEIEKQVIIAEGEGVEIIVFPELSLTGYSCQDLFHQQILLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +++ L T ++VG P +LN +++ G +I + K LPNY EF+ Sbjct: 66 NIETSVIQLLDFTRQLDITVIVGAPICADSVLLNCALVIQHGKLIGIVPKTYLPNYGEFY 125 Query: 125 EKRTFISG----------------YSNDPIVF---RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S S+D +F + ++ GI ICED+W L Sbjct: 126 EKRWFASSQDLQFQSIYYVGEKITISSDIQLFTTSQGVKFGIEICEDLWAPIPPSNQLTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K +V Q + IY G+ ++++ G F + Sbjct: 186 AGAELIFNLSASDDLIGKHNYLKSLVAQQSARTISGYIYSGCGFGESTQDVVYGGNGFIY 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM-------YIPLQ 270 + Q LA + K F ++ + D ++ S +++ S M +PLQ Sbjct: 246 ENGQLLA-EAKRFEIESQLIISEVDIEKLRTERRSNTTFVNAQRPSVMQRLRANNQLPLQ 304 Query: 271 ------------------------------------EEEADYNACVLSLRDYVQKNNFHK 294 EE + C L+ R + N Sbjct: 305 NITACIPASIQRDFVLTRLVDKYPFIPKGDKLREHCEEILNIQVCGLAKR--LSHINCKT 362 Query: 295 VIIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 V+IG+SGG+DS L +A D LG + + I +P T+ ++ +A + LG Sbjct: 363 VVIGVSGGLDSTLALLVATQTFDKLGYDRRGIIGITMPGFGTTDRTYNNAITLMQNLGIT 422 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + I V F+ + + + I EN Q+R R ILM +SN +++ T + S Sbjct: 423 IREISIAASVKQHFTDIEHNI--DVHDITYENSQARERTQILMDISNQVGGIVIGTGDLS 480 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E+++G+ T GD + + KT + L S+ +G+ + E I+ Sbjct: 481 ELALGWCTYNGDHMSMYAVNVGIPKTLIKHLVSYVAENGVEDSIKLTLE----DIVNTPI 536 Query: 470 SAELRPH-------QTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQEYN 511 S EL P Q ++ + PY + D + ++ +++F +EY Sbjct: 537 SPELTPADENGEIVQKTEDLVGPYELHDFFLYYVLRFGFRPKKIFWLAQQAF---KEEYA 593 Query: 512 DETVRYVEHLLY----GSEYKRRQAPVGTKITAKSF 543 D + + + Y ++KR P G K+ + S Sbjct: 594 DGIILHWLRIFYKRFFSQQFKRSCLPDGPKVGSVSL 629 >gi|237752180|ref|ZP_04582660.1| NH(3)-dependent nad() synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229376422|gb|EEO26513.1| NH(3)-dependent nad() synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 260 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 19/257 (7%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V ++D V K F+ V+ GLSGGIDSA+ A + A K + + +MLP +S +SL+DA Sbjct: 20 VTFIQDEVTKRGFNAVVFGLSGGIDSAVVARLCQLAFKKTH-KALMLPSNQSSKESLQDA 78 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + G Y++L I + + F + Q S I N+ +R+R L + Sbjct: 79 LELCQKFGIAYEILSIKEPQSAFLQTLPNIAQ---SQIRLGNLSARLRMICLYDYAFAKN 135 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 A+++ TSNKSEI +GYGT++GD++ NP+ +LYKT++++LA LG Sbjct: 136 ALVVGTSNKSEILLGYGTIFGDLACAINPIGNLYKTEIYELAKV---------LG----- 181 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYV 518 IP SIL+K PSA+L Q+D++ L Y ILD I+ + E ++ + + E ++ V Sbjct: 182 IPQSILQKPPSADLYAGQSDEKELGFSYAILDRIMLLLHEEKDDAVILKEGLPKEALQLV 241 Query: 519 EHLLYGSEYKRRQAPVG 535 + + +K+ + Sbjct: 242 KERMQRFAFKQEMPKIA 258 >gi|150401092|ref|YP_001324858.1| NAD+ synthetase [Methanococcus aeolicus Nankai-3] gi|189083396|sp|A6UUS4|NADE_META3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|150013795|gb|ABR56246.1| NAD+ synthetase [Methanococcus aeolicus Nankai-3] Length = 254 Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 16/216 (7%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V + N V++GLSGGIDS+L A I V ALGK+NV +++P K ++ Q E A A L Sbjct: 18 VGEANAKGVVLGLSGGIDSSLVATICVKALGKDNVLGVIMPEKNSNTQDKEHAELLANQL 77 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G KY V I D++ F + +E + N++ RIR IL +N + ++ TS Sbjct: 78 GIKYTVSDITDVLKSFGA-GGYIPTKEFDKMADGNLKPRIRMCILYYFANKNNLLVAGTS 136 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSEI +GYGT YGD+ F + +L+KT+V +L+ + LG +P I+ Sbjct: 137 NKSEIYMGYGTKYGDLGSDFLLIGNLFKTEVRELSKY---------LG-----VPDEIIN 182 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 K+PSA L QTD++ L Y +LD ++ I +N+E Sbjct: 183 KAPSAGLWEGQTDEKELGITYELLDKVLMAIEQNKE 218 >gi|260592513|ref|ZP_05857971.1| putative NH(3)-dependent NAD(+) synthetase [Prevotella veroralis F0319] gi|260535559|gb|EEX18176.1| putative NH(3)-dependent NAD(+) synthetase [Prevotella veroralis F0319] Length = 656 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 134/567 (23%), Positives = 233/567 (41%), Gaps = 87/567 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+A+ + A+ +G+++I F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPSVRVADTQFNLAEIEKQIAIADGKGVEIIAFPELSLTGYSCQDLFHQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AI +L T +VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 NVEQAILSLLDFTRKLDIITIVGAPVAVGSLLLNCALVIQQGKLLGIVAKTYLPNYSEFY 125 Query: 125 EKRTFISG----------------YSNDPIVFRD---IRLGILICEDIWKNSNICKHLKK 165 EKR F S + D +FR + GI ICED+W + HL Sbjct: 126 EKRWFASSQDLRPKRIHFAGHHILVTPDMQIFRTPQGAKFGIEICEDVWAPTPPSNHLTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K + +++ Q + +Y G+ ++++ G +F + Sbjct: 186 AGAEIIFNLSASDELLGKHRYLKSLLSQQSARTICGYVYSGCGFGESTQDVVYGGNAFVY 245 Query: 224 DG----QQQLAFQMK---------------------------------------HFSEQN 240 + +Q FQ++ H+ E Sbjct: 246 ENGLLLEQSKRFQIEPQLVISEIDVERLRGERRTNSTFVNAQRPTATGLSGISGHYGELA 305 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-----YNACVLSLRDYVQKNNFHKV 295 + + ++ ++P E D N V L + N ++ Sbjct: 306 LTVDCQLQICPEREFSLTRQFEQHPFVPSTENMKDACDEILNIQVSGLAKRLVHTNCKRI 365 Query: 296 IIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 I+G+SGG+DS L +AV D LG ++++ + +P T+ ++ ++A K LG Sbjct: 366 IVGISGGLDSTLALLVAVKTFDTLGFDRKDIIGVTMPGFGTTDRTYQNAITLMKDLGVTI 425 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I V F + + EN Q+R R ILM LSN ++L T + SE Sbjct: 426 REINIASSVLQHFKDIEH--DASVHDVTYENSQARERTQILMDLSNQLGGLVLGTGDLSE 483 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++G+ T GD + + KT L + + SG+G T I++ S Sbjct: 484 LALGWCTYNGDHMSMYAVNVSVPKT----LTQFLVRYVAESGVGESTRHTLIDIVDTPIS 539 Query: 471 AELRP-------HQTDQESLPPYPILD 490 EL P Q ++ + PY + D Sbjct: 540 PELTPADEKGDIAQKTEDIVGPYELHD 566 >gi|261880533|ref|ZP_06006960.1| glutamine-dependent NAD+ synthetase [Prevotella bergensis DSM 17361] gi|270332756|gb|EFA43542.1| glutamine-dependent NAD+ synthetase [Prevotella bergensis DSM 17361] Length = 652 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 147/633 (23%), Positives = 264/633 (41%), Gaps = 106/633 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI +A +G+++I+F EL I+GY +DL ++ + Sbjct: 6 IKVASAIPTVQVADCRQNIIGIESLIAQAEGRGVEIIVFPELCITGYTCQDLFRQQPLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +++ L + +VG P + +LN V+L G I+ V K LPNY EF+ Sbjct: 66 AAENSMMHLLDFSRQLDIISIVGLPIVAGDLLLNCAVVLQKGRILGVVPKTYLPNYGEFY 125 Query: 125 EKRTFISG----------------YSNDPIVFRDIR---LGILICEDIWKNSNICKHLKK 165 EKR F S S+ P +FR G+ +CED+W + L Sbjct: 126 EKRWFASSQDLRPTTLRFAGCTIEVSSRPQLFRTCDGAVFGVELCEDVWAPTPPSNGLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K +++ Q + +Y + G+ +L++ G + + Sbjct: 186 AGADLIFNLSASDELTGKHAYLKKLIAQQSARTITGYVYSSAGYGESTQDLVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE----EEADY--- 276 + LA S++ MT Q+ SD +T +I Q E+A++ Sbjct: 246 EDGVLLA-----ESDRFAMTSQMQVAQIDIDRLRSDRRNNTTFINAQRVMLGEQAEFIDT 300 Query: 277 ----------------------------------NACVLSLRDYVQKNNFHKVIIGLSGG 302 N V++L + +IIG+SGG Sbjct: 301 EIIQTRDFKLERDVDPHPFIPAASNMQETCDEILNIQVMALAKRITHTQTKTLIIGVSGG 360 Query: 303 IDSA---LCAAIAVDALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI-H 356 +DS L A D L K+ ++ + +P T+ ++ +A A K+LG + I Sbjct: 361 LDSTMALLVCARTYDKLKKDRKDIIGVTMPGFGTTDRTYTNAIALMKSLGITIREINISQ 420 Query: 357 DLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 ++ HF + + +P+ + EN Q+R R ILM L+N M++ T + SE+++G Sbjct: 421 SIMQHF-----EDIGHDPNVHDVTYENAQARERTQILMDLANQLHGMVIGTGDLSELALG 475 Query: 415 YGTLYGDMSGGF----NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 + T GD + + K L + V +A+ + + L + I P ++ Sbjct: 476 WATYNGDHMSMYAVNTSIPKTLMQFLVRHVATEMDEAVAATLLDIVDTPISPELIPADEE 535 Query: 471 AELRPHQTDQESLPPYPILDDII-----------KRIVENEESFINNDQE-----YNDET 514 ++ Q ++ + PY + D + K + +++F N E Y+DET Sbjct: 536 GAIK--QKTEDLVGPYELHDFFLYYFLRYGFGPRKIFILAQKAFANTSAERTVGNYDDET 593 Query: 515 VRYVEHL----LYGSEYKRRQAPVGTKITAKSF 543 + + + + ++KR P G K+ + S Sbjct: 594 IIHWLQVFCRRFFSQQFKRSCLPDGPKVGSVSL 626 >gi|224437186|ref|ZP_03658167.1| NH(3)-dependent NAD(+) synthetase NadE [Helicobacter cinaedi CCUG 18818] gi|313143652|ref|ZP_07805845.1| NH(3)-dependent NAD synthetase [Helicobacter cinaedi CCUG 18818] gi|313128683|gb|EFR46300.1| NH(3)-dependent NAD synthetase [Helicobacter cinaedi CCUG 18818] Length = 281 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 119/213 (55%), Gaps = 20/213 (9%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 ++CV L+ + F K ++GLSGGIDSA+ AA+ V ALG EN++ +++P +SP Sbjct: 6 DSCVFFLQKEFSQRGFKKGVLGLSGGIDSAVVAALGVLALGSENLKVLLMPSLSSSPIHF 65 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLM---SQFLQ---EEPSGIVAENIQSRIRGNI 390 DA AK L V+ + +HF S + + L+ ++ + N SR+R + Sbjct: 66 NDALNLAKILNLTPQVIKLESFQSHFASHLGFENDLLKSDLDDRQKLRMGNFCSRLRMAL 125 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L ++ A++L TSNKSE+ +GYGT++GD++ NP+ LYKTQ+F LA N Sbjct: 126 LYDYASAENALVLGTSNKSELVLGYGTIFGDLAYAINPIGSLYKTQIFALAKHLN----- 180 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 +P +++ K PSA+L +Q+D+ L Sbjct: 181 ---------LPQNLINKKPSADLFANQSDENDL 204 >gi|331082722|ref|ZP_08331845.1| hypothetical protein HMPREF0992_00769 [Lachnospiraceae bacterium 6_1_63FAA] gi|330400341|gb|EGG79983.1| hypothetical protein HMPREF0992_00769 [Lachnospiraceae bacterium 6_1_63FAA] Length = 637 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 128/561 (22%), Positives = 231/561 (41%), Gaps = 94/561 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + +E + G +++F EL I+GY DL F ++ +Q Sbjct: 6 IKVAAATPQIEVADCIHNTQEIVKKAKEMSAAGARILVFPELCITGYTCHDLFFNETLLQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L + D I VG P + + N+ ++ G I+ + K ++PNY EF+ Sbjct: 66 SAKKQLLVLAEELKDTEGLIFVGLPLEYNGKLYNTAAAINRGEILGIIPKHSIPNYGEFY 125 Query: 125 EKRTFISGYSNDPIVFRDIRLG-----------------------ILICEDIWKNSNICK 161 E R F SG + +I+LG + ICED+W ++ Sbjct: 126 EARYFTSGRD----IESEIKLGDKMVPFGSKVLFECEEMPQLCVAVEICEDVWTPASPGL 181 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA + +L+AS K + R E++ GQ + + +Y G+ +L+F G Sbjct: 182 FHAMAGANVIVNLSASDEIAGKSEYRRELIKGQSARLLCGYVYATAGNGESTQDLVFGGQ 241 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYD-----------QQLSQWNYMSDDSASTMYI- 267 + + LA Q F E Y +++S W + + ++I Sbjct: 242 NLICENGSLLA------EAQLFKNETVYGVLDIQKLRGERRRISTW--LEEKGEKHLHIS 293 Query: 268 ---PLQEEEADYN----------------AC-------VLSLRDYVQKNNFHKVIIGLSG 301 P++E E N C + L+ ++ ++G+SG Sbjct: 294 FHLPMEETELYNNFEKNPFVPDCDTERAKRCEEILTIQAMGLKKRMEHTKCKSAVLGISG 353 Query: 302 GIDSALC---AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L A A+D +G ++N+ + +P T+ ++ +A K LG + + I Sbjct: 354 GLDSTLALLVTARAMDFMGLDRKNITAVTMPCFGTTDRTYTNACELTKRLGAELLEVDIK 413 Query: 357 DLV-NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 V HF + + + + EN Q+R R ++M ++N M++ T + SE+++G+ Sbjct: 414 KAVLQHFEDIGHDYNVHD---VTFENAQARERTQVIMDIANQQGGMVIGTGDFSELALGW 470 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD + + KT V L H + + I +L+ S EL P Sbjct: 471 ATYNGDHMSMYGVNGGVPKTMVRHLV----RHYVDTCQEEKLAEILRDVLDTPVSPELLP 526 Query: 476 ------HQTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 527 PKEGEIAQKTEDLVGPYELHD 547 >gi|284163768|ref|YP_003402047.1| NAD+ synthetase [Haloterrigena turkmenica DSM 5511] gi|284013423|gb|ADB59374.1| NAD+ synthetase [Haloterrigena turkmenica DSM 5511] Length = 264 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/254 (32%), Positives = 131/254 (51%), Gaps = 20/254 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R V + ++GLSGGIDS L A +AV+ALG ENV ++LP + +S ++ DA Sbjct: 22 IRSQVDAADADGTVLGLSGGIDSTLTAHLAVEALGAENVHGLVLPARVSSEGNMSDAERV 81 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ L YDV+ + +V+ +L+ + + E N ++R R + ++NH + ++ Sbjct: 82 AQDLEISYDVIEVEPIVD---ALLEAYPEAEGDREAVGNARARARAVLNYLVANHEERLV 138 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T N+SE +VGY T YGD + +P+ +LYK QV QLA +P Sbjct: 139 LGTGNRSEAAVGYFTKYGDGAVDCHPIGNLYKAQVRQLARHVG--------------VPE 184 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQ--EYNDETVRYVE 519 + K+ +AEL QTD++ + Y LD I+ ++ S + E ETV V Sbjct: 185 ELAAKTATAELWADQTDEDEMGVSYETLDSILATHIDGPLSVDATARLLEVEAETVEKVR 244 Query: 520 HLLYGSEYKRRQAP 533 + SE+KRR P Sbjct: 245 GMYERSEHKRRAPP 258 >gi|291563820|emb|CBL42636.1| NAD+ synthetase [butyrate-producing bacterium SS3/4] Length = 643 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 132/554 (23%), Positives = 230/554 (41%), Gaps = 79/554 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + V D N + + +EA Q + +++F EL ++GY DL + + I Sbjct: 6 IRVAAATPDLKVADPVFNREQTWKMMQEAASQDVKILVFPELGLTGYTCSDLFLQDTLID 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L + D +G P + N + G ++ + K +LPNYSEF+ Sbjct: 66 QAKEELLWLLDASKDMDMLTFIGLPWMKDGKLYNVAAAIKDGELLGLVPKRHLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIV--------------FRDIRLGILI-----CEDIWKNSNICKHLKK 165 E R F G +V FR + LI CED+W K Sbjct: 126 ELRHFNPGPVKPDVVEWGESLIPFGSKILFRCTNIPELIVAAELCEDVWTMDPPSVSHAK 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R ++ GQ + + IY N G+ +L+F G Sbjct: 186 AGATVIANCSASDETTGKAGYRETLIAGQSARLVCAYIYANAGEGESTQDLVFGGHDIIA 245 Query: 224 DGQQQLA----------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS---DDSAST 264 + LA +++K+ E+ MT + ++YM + + T Sbjct: 246 ENGNILAESERFKNGMITADIDLYRLKN--ERRRMTTCQPGAETEDYDYMDFTLNKTELT 303 Query: 265 M--------YIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC- 308 + ++P E+E C + L+ + ++G+SGG+DS L Sbjct: 304 LKRYIDPAPFVPSNEKERTAR-CEEILTIQAMGLKKRLAHTGAKSAVVGISGGLDSTLAL 362 Query: 309 --AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 A A D LG +EN+ ++ +P T+ ++ +A K LG + I V+ F Sbjct: 363 LITARAFDMLGISRENILSVTMPCFGTTDRTYNNAVTLTKKLGATLREVNIRKAVSTHF- 421 Query: 365 LMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + +P+ + EN Q+R R ILM L+N + M++ T + SE+++G+ T GD Sbjct: 422 ---EDIGHDPAIHDVTYENSQARYRTLILMDLANKTNGMVIGTGDMSELALGWATYNGDH 478 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------H 476 + + KT V L + + T G L +V+ +L+ S EL P Sbjct: 479 MSMYGVNASVPKTLVRHLVRY---YADTCGDKALADVL-NDVLDTPVSPELLPPEDGKIS 534 Query: 477 QTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 535 QKTEDLVGPYELHD 548 >gi|292656012|ref|YP_003535909.1| NAD+ synthetase [Haloferax volcanii DS2] gi|291370157|gb|ADE02384.1| NAD+ synthetase [Haloferax volcanii DS2] Length = 276 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 20/286 (6%) Query: 251 LSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 ++ + +S+D+ + + +E EA + D V+ +IGLSGGIDS L A Sbjct: 1 MTSVDVLSEDAPFDLLLSDEELEAHREHITTFIEDTVEAAGADGAVIGLSGGIDSTLTAF 60 Query: 311 IAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL 370 +AV+ALGKE++ +++P + DA A+ LG +YDV+ I + FF F Sbjct: 61 LAVEALGKESLHGLVMPSVANDEDMMSDAEGVAEMLGIEYDVVEIQPIAETFF---DTFP 117 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 + + A N+ R R + ++NH ++L T N++E GY T YGD + NP+ Sbjct: 118 EAADDRMAAGNVYVRTRAVLNYFVANHENRIVLGTGNRAEAMTGYFTKYGDQAVDCNPIG 177 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPIL 489 +LYK QV QLA+ +P ++ ++PSAE+ QTD+ L Y L Sbjct: 178 NLYKQQVRQLAAHVG--------------VPEDLVLQTPSAEMWSGQTDEGELGLTYDAL 223 Query: 490 DDIIKRIVEN--EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 D I+ V+ +S +E V V L+ GS +KR P Sbjct: 224 DAILALHVDGPLSKSATVRHLGVTEEQVDRVVGLVEGSVHKRSMPP 269 >gi|311105838|ref|YP_003978691.1| NAD+ synthetase [Achromobacter xylosoxidans A8] gi|310760527|gb|ADP15976.1| NAD+ synthetase [Achromobacter xylosoxidans A8] Length = 685 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 135/565 (23%), Positives = 235/565 (41%), Gaps = 84/565 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N A+ ++A + G L F EL +S Y +DL +K+ + Sbjct: 15 RVAVGVPECKVADPAFNAAQTIALAQQAAQGGAVLAAFPELGLSAYTCDDLFHQKALLDE 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C A+ + + T + +VVG P + + N V+ G ++ V K LPNY EF+E Sbjct: 75 CEEALARVVAATAEMDIAVVVGAPLRVAHQLFNCAVVAAGGRVLGVVPKSYLPNYGEFYE 134 Query: 126 KRTFISGYS---------------NDPIVFRDIRLGIL-----ICEDIWKNSNICKHLKK 165 R F +G ++F+ +L + ICED+W Sbjct: 135 ARQFSAGDCAIVSEISLLGQTVPFGSELIFQMEKLPLFQFHVEICEDVWVPIPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V Q + +Y + G+ ++ +DG + + Sbjct: 195 AGATVLVNLSASNIVVGKSDYRHQLVAQQSARCLSAYMYTSAGRGESSTDMAWDGQALIY 254 Query: 224 D------------GQQQLAFQ---MKHFSEQNFMTEWHYDQQLSQ--------------W 254 + G L F ++ S + M + + Q + + Sbjct: 255 ENGELLGESERFLGHSHLLFSDVDLERLSRER-MRQTTFGQSVRRHQDEVRKFRSVAVPV 313 Query: 255 NYMSDDS--------ASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLS 300 N +D+ A Y+P + D Y+ V +L + + KV+IG+S Sbjct: 314 NPPLEDAELPLERRVARFPYVPADPQRRDARCKEVYSIQVQALVQRLSASGMSKVVIGIS 373 Query: 301 GGIDSA---LCAAIAVDA--LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L A A+DA L + N+ + +P TS ++L+ A + +GC + I Sbjct: 374 GGLDSTHALLVCAKAMDALELPRSNILAVTMPGFATSSRTLQQARKLMEVVGCTASEIDI 433 Query: 356 H-DLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 + L + +P I EN+Q+ R N L ++N + A+++ T + SE+++ Sbjct: 434 RPSCLQMLKDLGHPYADGKPVYDITFENVQAGERTNHLFRIANFNNAIVIGTGDLSELAL 493 Query: 414 GYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 G+ T GD ++ + KT + L W G LG + +L S E Sbjct: 494 GWCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESG---RLGEEGAQVLLDVLGTDVSPE 550 Query: 473 L-------RPHQTDQESLPPYPILD 490 L +P Q ++S+ PY + D Sbjct: 551 LVPGGADDKPVQKSEDSIGPYELQD 575 >gi|90417816|ref|ZP_01225728.1| glutamine-dependent NAD(+) synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90337488|gb|EAS51139.1| glutamine-dependent NAD(+) synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 691 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 135/571 (23%), Positives = 231/571 (40%), Gaps = 97/571 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +A + D A N A RA E+A+++G+DL++F EL +S Y +DL + + + Sbjct: 20 VRVGVATPGVFIADPARNAAATIRAAEDADKEGVDLLVFPELGLSAYAIDDLHLQDALLD 79 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + SA+ T+ + D + ++VG P + + N V + G I+ V K+ LPNY E++ Sbjct: 80 SVESALATVCERSRDLRSVLLVGAPLRRNGRLYNCAVAIARGRILGVVPKLFLPNYREYY 139 Query: 125 EKRTFISGYSNDPIVFRDIRLG-----------------------ILICEDIWKNSNICK 161 EKR F SG + RDI + ICED W + Sbjct: 140 EKRWFASGAG---MTGRDITVAGQEAPFGIDLLFEASDLPGFVFHTEICEDYWAPTPPST 196 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFD 217 GA L +L+AS K RH + Q + YV G+ E L +D Sbjct: 197 DGAMAGARILCNLSASNIVVGKSADRHLLSASQ--SMRCIAAYVYSAAGRGESTTDLAWD 254 Query: 218 GASFCFD---------------------------GQQQL-----------------AFQM 233 G ++ GQ++L AF+ Sbjct: 255 GQGSIYELGDLLAESKRFADAGQLIVADVDVGRIGQERLRTPTFNDAAALRGHPETAFRT 314 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F+ + + + + ++ Y+ ++ Q+ +N V LR + Sbjct: 315 VRFAHEPAFEDLGLRRPVRRFPYVPNNPERLH----QDCYEAFNIQVEGLRRRFEATPGD 370 Query: 294 KVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 ++IG+SGG+DS + AA A D +G + + +P T + +A A +ALG Sbjct: 371 HMVIGVSGGLDSTHALIVAAKACDQMGLPRSTILGFTMPGFATGDATKANALALMRALGT 430 Query: 349 KYDVLPIHDLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 + + I M F EP + EN+Q+ +R + L L+N ++ T Sbjct: 431 GCEEIDIRPAARQMLGDMGHPFAGGEPVYDVTFENVQAGLRTDYLFRLANQRSGFVIGTG 490 Query: 407 NKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 + SE+++G+ T GD ++ + KT + L W T T + +IL Sbjct: 491 DLSELALGWCTYGVGDQMSHYSVNPGVPKTLIQYLVRWVVR---TEQFDAETGKLLTAIL 547 Query: 466 EKSPSAELRP------HQTDQESLPPYPILD 490 + S EL P Q+ Q+ + PY + D Sbjct: 548 DTEISPELVPVDAEGGMQSTQDKIGPYELHD 578 >gi|150015930|ref|YP_001308184.1| NAD+ synthetase [Clostridium beijerinckii NCIMB 8052] gi|149902395|gb|ABR33228.1| NAD+ synthetase [Clostridium beijerinckii NCIMB 8052] Length = 632 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 138/619 (22%), Positives = 260/619 (42%), Gaps = 86/619 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D+ N+ + ++A + I+F EL ++ Y DL ++ + Sbjct: 4 IKVAAACPKTRVADVDYNVKNILQCIDDAVKNESKFIVFPELCLTAYTCGDLFLQEYLLN 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + T D I VG P + + N +L GN++ + K LPNYSEF+ Sbjct: 64 KALDGIFEILESTKDYDTLIAVGAPLLCESTLYNCAFLLFKGNVLGIVPKSYLPNYSEFY 123 Query: 125 EKRTFISGYSNDP----------------IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F G S + ++F G+ ICED+W +L Sbjct: 124 EKRWFTEGLSIEDERVDLPFQKDVPFGVNLIFSSSIANFGVEICEDLWVTIPPSSYLSLM 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDGASFC- 222 GA + +L+AS +K+ R +++ Q + IY + G + +++F G Sbjct: 184 GAHIIGNLSASNELVSKMDYRKSLISNQSARSICSYIY-SSAGVHESTTDVLFSGHLLIS 242 Query: 223 -----------FDGQQQLAF-----------QMKHFSEQNFMTEWHYDQQLSQWNYMSDD 260 F + ++ + +MK+ S ++ + ++ + SD Sbjct: 243 ENGSLLKENDRFQRENEVIYSIVDVFKLKSERMKNLSFRDSSKFINKKPNTIKFEF-SDV 301 Query: 261 SASTM--------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 S ST ++P E+E + +N L ++ K I+G+SGG+DS Sbjct: 302 SISTFDRFVDKHPFVPSYEKEREVRCKEIFNIQAAGLAKRLEHTGSKKAIVGISGGLDST 361 Query: 307 LCAAIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + V + K+N+ TI +P T+ ++ +A K LG + I Sbjct: 362 LALLVIVKTFELLGIDKKNIVTITMPGFGTTDRTYNNAINLCKELGTDLREINIVKASLQ 421 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + ++ + EN+Q+R R ILM ++N + +L+ T + SE+++G+ T GD Sbjct: 422 HFEDIGH--DKDIHDVTYENVQARERTQILMDIANKERGLLIGTGDLSELALGWCTYNGD 479 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEVIPPSILEKSPSAELRPH 476 ++ + KT V L + H T + L + P +L K + E+ Sbjct: 480 HMSMYSVNPSIPKTLVRYLVQYVAQHESTEVVRDILMDILDTPVSPELLPKDANGEIA-- 537 Query: 477 QTDQESLPPYPILDDIIKRIVENEES-----FINN---DQEYNDETV-RYVEHLL---YG 524 Q ++ + PY + D + +++ + F+ +Y+DE + ++++ + + Sbjct: 538 QKTEDIVGPYELHDFFLYHFIKHGSTKERIFFLARAAFKDDYSDEEIQKWLDKFIFRFFT 597 Query: 525 SEYKRRQAPVGTKITAKSF 543 ++KR P G K+ + S Sbjct: 598 QQFKRSALPDGPKVGSISL 616 >gi|242310391|ref|ZP_04809546.1| NH(3)-dependent NAD synthetase [Helicobacter pullorum MIT 98-5489] gi|239522789|gb|EEQ62655.1| NH(3)-dependent NAD synthetase [Helicobacter pullorum MIT 98-5489] Length = 255 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 81/267 (30%), Positives = 141/267 (52%), Gaps = 23/267 (8%) Query: 275 DYNACVLSLRDYVQKN----NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 +Y + +L D++QK F V+ GLSGGIDSA+ A + A G +N+ I++P Sbjct: 3 NYQKIIETLVDFLQKKVKEKGFKSVVFGLSGGIDSAVVAVLCKQAFG-DNIHGILMPSLQ 61 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 +S S++DA ++ Y + P+ F + + LQ PS I N+ +RIR Sbjct: 62 SSTNSIQDALELCESFKIPYSICPLEKPQKAFLQTL-EGLQNNPSRI--GNLCARIRMIY 118 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L + ++++++ TSNKSEI +GYGT++GD++ NP+ +LYKT++F++A Sbjct: 119 LYDYAFANQSLVIGTSNKSEILLGYGTIFGDLACAINPIGNLYKTEIFKIAKILQ----- 173 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE 509 IP SI K+PSA+L Q+D++ L Y ILD+I+ + + ++ Sbjct: 174 ---------IPQSIQNKAPSADLYEGQSDEKELGFSYAILDEIMLSLEKGLSKKEMLEKN 224 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGT 536 + + +V + E+KR+ + + Sbjct: 225 LSKTAIEFVLQRMQLMEFKRKMPEIAS 251 >gi|313203753|ref|YP_004042410.1| nh(3)-dependent nad(+) synthetase [Paludibacter propionicigenes WB4] gi|312443069|gb|ADQ79425.1| NH(3)-dependent NAD(+) synthetase [Paludibacter propionicigenes WB4] Length = 631 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 137/558 (24%), Positives = 241/558 (43%), Gaps = 87/558 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIA----KARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 +++A A + V D A N++ RR EE + +I F EL ++GY DL F++ Sbjct: 6 VRVAAAIPDLRVADCAFNVSCIADLVRRGEEEKAQ----VICFPELSVTGYTCADLFFQQ 61 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + A++ L+ T + I+VG P + Q + N+ V+L G+I+ V K +LPN Sbjct: 62 QLLSDAEKALNELQMLTFSTTSVIIVGMPVRVQNQLFNTAVVLQGGHILGVVPKTHLPNN 121 Query: 121 SEFHEKRTF------------ISG----YSNDPIVFRD--IRLGILICEDIWKNSNICKH 162 +EF+EKR F +SG + D ++F D GI +CED+W Sbjct: 122 NEFYEKRWFSPSTATGVQRITLSGEDVPFGTD-LLFSDGKFSFGIELCEDLWVPIPPSSQ 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD---------- 212 GA+ +F+L+A+ K + +++ Q + + +Y + G+ Sbjct: 181 HALHGADIIFNLSATNELIGKHQYLRQLIEQQSARCNAGYVYSSAGAGESTTDVVYAGNG 240 Query: 213 ------ELIFDGASFCFDGQ---------QQLAFQMKHFSEQNFMTEWHY------DQQL 251 ++I F F+ Q + A +M++ + N ++ Y D Sbjct: 241 IIVENGKIIASSERFSFEPQLIVSDVDIERLQADRMRNTNYTNEKSDKTYRTIKLEDAHF 300 Query: 252 SQWNYMSDDSASTMYIPLQEEEAD----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 +Q+ PL +A ++ V L + V++G+SGG+DS L Sbjct: 301 TQFELKRTFDKHPFVPPLTNRDASCEEIFSIQVGGLAKRWKHTKAETVVVGISGGLDSTL 360 Query: 308 CAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNH 361 + V D LG ++++ I +P T+ ++ +A K+LG + I D + H Sbjct: 361 ALLVCVKTADKLGIDRKHIFGITMPGFGTTDRTYTNALNLMKSLGITMLEISIKDACIQH 420 Query: 362 FFSLMSQFLQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + + +P + EN Q+R R ILM ++N +++ T + SE ++G+ T Sbjct: 421 F-----KDINHDPDTHDVTYENTQARERTQILMDIANKHNGLVIGTGDLSESALGWATYN 475 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---- 475 GD + + KT V L W +H + S +E I IL+ S EL P Sbjct: 476 GDHMSMYAVNSGVPKTLVRYLVDWA-AHKLESQ----SEEILRDILDTPVSPELLPADES 530 Query: 476 ---HQTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 531 GNIAQKTEDIVGPYELHD 548 >gi|153854639|ref|ZP_01995889.1| hypothetical protein DORLON_01884 [Dorea longicatena DSM 13814] gi|149752743|gb|EDM62674.1| hypothetical protein DORLON_01884 [Dorea longicatena DSM 13814] Length = 651 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 131/549 (23%), Positives = 228/549 (41%), Gaps = 70/549 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A A + V D+A N + +E G +I+F EL ++GY DL + ++ Sbjct: 6 VKAAAATPDIRVADVAYNTENICKMIDETVANGAKVIVFPELCVTGYTCSDLFMQDILLK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + T + A I +G P + N L+ GNI+ + K LPNY EF+ Sbjct: 66 EAKEALFKIADYTKEKDALIFIGVPLAVDGELYNVAAALNRGNILGLTTKTFLPNYGEFY 125 Query: 125 EKRTFISG--------YSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F G I F ++ + ICED+W + Sbjct: 126 EMRQFRPGPDMARWITLDGKKIPFGPQLLFVAEQMEELVVSAEICEDVWSPIPPSTLAAR 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R ++ GQ + + IY N G+ +L+F G + Sbjct: 186 EGATVIVNCSASDETIGKAAYRESLIEGQSARLICGYIYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ----WNYMSDDSASTMYIP----LQEEE-- 273 + LA FS + TE + LS+ + ++ + + IP ++E E Sbjct: 246 ENGTTLA-SSNRFSNEVIYTEIDVKRLLSERRKNTTFQTEKERTLIRIPFEIHVEETELT 304 Query: 274 -------------ADYN-AC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC---A 309 A+ N C + L+ + + ++G+SGG+DS L + Sbjct: 305 RRFASRPFVPSVMAERNLRCEEILTIQAMGLKKRLAHAHAKSAVVGISGGLDSTLALLVS 364 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A A DALG + + + +P T+ ++ ++A + LG +P+ V F + Sbjct: 365 AKAFDALGMDRSGIVAVTMPCFGTTDRTYQNACKMSVKLGATLREIPVGAAVEQHFKDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 E + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 425 H--DPEDHSVTYENSQARERTQVLMDVANQTGGIVIGTGDMSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + + T L EV+ +L+ S EL P Q ++ Sbjct: 483 VNASVPKTLVRHLVHY---YADTCEDQELKEVL-YDVLDTPVSPELLPPKDGEIAQKTED 538 Query: 482 SLPPYPILD 490 + PY + D Sbjct: 539 LVGPYELHD 547 >gi|291558013|emb|CBL35130.1| NAD+ synthetase [Eubacterium siraeum V10Sc8a] Length = 648 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 142/622 (22%), Positives = 258/622 (41%), Gaps = 97/622 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + E ++ + L +F EL I+GY +DL ++ + + Sbjct: 6 IKVAAATPEIKVADCKHNAKQIISLARELAKKDVKLAVFPELCITGYTCQDLFYQTTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + + VVG P Q + + N + G ++ K LPNY+EF+ Sbjct: 66 GAKNALVTILEELSELDMITVVGLPMQFESKLYNCAAVTYHGKVLGYVPKQYLPNYNEFY 125 Query: 125 EKRTF--------------------------ISGYSNDPIVF-----RDIRLGILICEDI 153 E R F +S Y ++F D GI +CED+ Sbjct: 126 EMRHFTAWDGSKCEYFLNRFDTDADGECDDSLSAYFGAGLIFCCNNMHDFSFGIELCEDL 185 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD- 212 W +L + GA + +L+AS K + R +V Q + + IY + G+ Sbjct: 186 WSPCPPSTYLAQDGANIILNLSASNEMIGKSEYRRSLVLNQSARLISGYIYCSAGEGEST 245 Query: 213 -ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE--------------------------W 245 +L+F G + + LA + + FS ++E W Sbjct: 246 QDLVFSGHNIIAENGATLA-ESELFSNDYVISEIDVNKLAFERRKNTSFRNDKCDTETIW 304 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA-CVLSLRDYVQKNNF-----HKVIIGL 299 +D L+ ++ + T +IP +E D +LS++ + K +IG+ Sbjct: 305 -FDMPLTD-TKITRFVSRTPFIPYSADETDKRCELILSMQAHGLKKRLAHTYAKTAVIGI 362 Query: 300 SGGIDSALCAAIAVDA---LGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + +A LG+ ++ + +P T+ ++ +A +A+G + Sbjct: 363 SGGLDSTLALLVCANAMKLLGRPMTDIVAVTMPCFGTTKRTKSNAVKICEAIGVTLREID 422 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I D V F + + + +V EN Q+R R +LM ++N + +++ T + SE+++G Sbjct: 423 ITDSVKQHFLDIGHDIND--LSVVFENGQARERTKVLMNIANQTGGLVIGTGDLSELALG 480 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT + L S+ + T+ L E + IL+ S EL Sbjct: 481 WATYNGDHMSMYGVNCSIPKTLIKHLVSY---YSKTTDNKLLKESL-EDILDTPVSPELL 536 Query: 475 P------HQTDQESLPPYPILD----DIIKRIVENEESF----INNDQEYNDETV----R 516 P Q ++ + PY + D + I+ E+ F D Y+ ET+ + Sbjct: 537 PAHNGEISQKTEDLVGPYELHDFFLYNGIRWGFTPEKVFRLALYAFDGAYDRETILKWLK 596 Query: 517 YVEHLLYGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 597 TFYRRFFSQQFKRSCLPDGPKV 618 >gi|145223229|ref|YP_001133907.1| NAD synthetase [Mycobacterium gilvum PYR-GCK] gi|315443687|ref|YP_004076566.1| NAD+ synthetase [Mycobacterium sp. Spyr1] gi|145215715|gb|ABP45119.1| NAD+ synthetase [Mycobacterium gilvum PYR-GCK] gi|315261990|gb|ADT98731.1| NAD+ synthetase [Mycobacterium sp. Spyr1] Length = 680 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 127/551 (23%), Positives = 224/551 (40%), Gaps = 82/551 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + + D A N R E + + L +F EL +SGY ED+V + + ++ Sbjct: 12 VRVAACTQHVAIADPAANAESVLRMARECHHDHVGLAVFPELTLSGYSIEDIVMQDALLE 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A AI + + + D +VVG P + + V N+ V++ G I+ V K LP Y EF+ Sbjct: 72 AVREAILEVAAGSADLLPVLVVGAPLRFRHRVYNTAVVIHRGRILGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIVFRDIRLG-----------------------ILICEDIWKNSNICK 161 EKR +G +IRLG + ICED++ Sbjct: 132 EKRQIAAGDDES----GEIRLGGADVPFGPDLLFEATDVPGFVLHVEICEDMFVPVPPSA 187 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA L +L+ SP + + R + S +Y G+ +L +DG Sbjct: 188 EAALAGATVLANLSGSPITIGRAEDRSLLARSASSRCLAAYVYAAAGEGESTTDLAWDGQ 247 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQL--------------SQWNYMSDDSASTM 265 + ++ LA Q + F + + D +L + + + +DS + Sbjct: 248 TMIWENGVCLA-QSERFPKGERRSTADVDVELLLNERLRMGTFDDNRRHHLIDEDSYRHI 306 Query: 266 YIPLQEEEAD---------------------------YNACVLSLRDYVQKNNFHKVIIG 298 L + D YN V L ++ ++ KV++G Sbjct: 307 SFVLDPPDGDTGLMREVERFPFVPADPARLEQDCYEAYNIQVSGLEQRLRALHYPKVVLG 366 Query: 299 LSGGIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 LSGG+DS +A A+ +E ++ LP T ++ +A A+ALG ++ + Sbjct: 367 LSGGLDSTHALIVAARAMDREERPRSDILAFTLPGFATGERTRNNATRLAEALGVTFETI 426 Query: 354 PIHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I + + E+ + EN+Q+ +R + L L+NH ++L T + SE+ Sbjct: 427 DITETAELMLKELGHPFSRGEKVYDVTFENVQAGLRTDYLFRLANHRGGIVLGTGDLSEL 486 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++G+ T GD +N + KT + L W S ++ + + S+L+ S Sbjct: 487 ALGWSTYGVGDQMSHYNVNGGVPKTLIQHLIRWVIS---SNQFDDVVNEVLQSVLDTEIS 543 Query: 471 AELRPHQTDQE 481 EL P D+E Sbjct: 544 PELVPAGEDEE 554 >gi|222823902|ref|YP_002575476.1| NH(3)-dependent NAD+ synthetase [Campylobacter lari RM2100] gi|222539124|gb|ACM64225.1| NH(3)-dependent NAD+ synthetase [Campylobacter lari RM2100] Length = 246 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/246 (31%), Positives = 142/246 (57%), Gaps = 27/246 (10%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 +I+GLSGGIDSAL A + A+G E + +++P KY+ ++L+DA L + ++ Sbjct: 23 LILGLSGGIDSALVAHLCKKAVG-EKLFVLLMPTKYSKKENLDDALMLCDHLQIHHKIIY 81 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I +++ + + + ++ + + N+ +R+R ++L S A+++ TSNKSE+ +G Sbjct: 82 IDEVLCAY-----EKICQDLNPLRFGNLAARVRMSLLYDYSALHNALVVGTSNKSELMLG 136 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 YGT+YGD++ FNPL LYK++VF+LA + H + ++K+PSA+L Sbjct: 137 YGTIYGDLACAFNPLATLYKSEVFELAKFIGVH--------------ENFIQKAPSADLW 182 Query: 475 PHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 P+Q+D++ L Y +LD+++K + EN +S N D+ + + V++ + +R+ P Sbjct: 183 PNQSDEKDLGYKYEVLDEVLKAL-ENNQSLENFDENLKNLVLERVQNNAF-----KRKLP 236 Query: 534 VGTKIT 539 K T Sbjct: 237 TTLKNT 242 >gi|159041674|ref|YP_001540926.1| NAD+ synthetase [Caldivirga maquilingensis IC-167] gi|157920509|gb|ABW01936.1| NAD+ synthetase [Caldivirga maquilingensis IC-167] Length = 285 Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 142/274 (51%), Gaps = 24/274 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R YV +IGLSGGIDS++ A++ V ALGK+ V +++PYK T P+ ++DA Sbjct: 26 IRTYVNSVGAKGAVIGLSGGIDSSVTASLLVRALGKDKVLALIMPYKTTPPEDVKDAIQL 85 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-NIQSRIRGNILMALSNHSKAM 401 A+ LG KYDV+ I + F S + F + E IVA NI +RIR IL +N + + Sbjct: 86 AQMLGVKYDVVNIDPIRASFSSTIPAFKESE---IVANGNILARIRMTILYYYANLNNMI 142 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 + T +KSE+ +GY T YGD P+ D+YK+QV L G GL P Sbjct: 143 VAGTGDKSELLIGYFTKYGDGGVDILPIGDVYKSQVRML-------GRRLGL-------P 188 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEH 520 SI+ K S L QT + L Y +D I+ +V+ + QE + + +E Sbjct: 189 DSIVTKPSSPRLWEGQTAEGELGVSYADIDVILHALVDLRMNP-QKAQEATGKPLNLIEQ 247 Query: 521 L---LYGSEYKRRQAPVGTKITAKSFGRDRLYPI 551 + + +E+KRR PV +I ++ G D P+ Sbjct: 248 VWRRVVTTEHKRR-TPVVPRIGLRTIGLDWRMPV 280 >gi|224418532|ref|ZP_03656538.1| NH(3)-dependent NAD+ synthetase [Helicobacter canadensis MIT 98-5491] gi|253826914|ref|ZP_04869799.1| NH(3)-dependent NAD(+) synthetase [Helicobacter canadensis MIT 98-5491] gi|313142058|ref|ZP_07804251.1| NH(3)-dependent NAD synthetase [Helicobacter canadensis MIT 98-5491] gi|253510320|gb|EES88979.1| NH(3)-dependent NAD(+) synthetase [Helicobacter canadensis MIT 98-5491] gi|313131089|gb|EFR48706.1| NH(3)-dependent NAD synthetase [Helicobacter canadensis MIT 98-5491] Length = 252 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 87/264 (32%), Positives = 138/264 (52%), Gaps = 29/264 (10%) Query: 275 DYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 DY+ + L ++ VQK F V+ GLSGGIDSA+ A + A G N I++P Sbjct: 3 DYSKIITKLVEFLQTEVQKRGFKSVVFGLSGGIDSAVVAVLCKQAFGL-NHHAILMPSLQ 61 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 +S SLEDA K + +LP+ F + + L+ P+ + N+ +RIR Sbjct: 62 SSKSSLEDALELCKTFDISHSILPLEKPQKGFLDTL-EGLENNPARM--GNLCARIRMIY 118 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L + A+++ TSNKSEI +GYGT++GD++ NP+ +LYKT++F++A N Sbjct: 119 LYDYAFAKNALVIGTSNKSEILLGYGTIFGDLACAINPIGNLYKTEIFEIAKLLN----- 173 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINN--- 506 +P SI K+PSA+L Q+D++ L Y ILD+I++ + E+ F Sbjct: 174 ---------LPQSIQTKAPSADLYEGQSDEKELGFSYQILDNIMQLL---EQGFSKQEIL 221 Query: 507 DQEYNDETVRYVEHLLYGSEYKRR 530 D+ + V V + E+KR+ Sbjct: 222 DKNLPKKAVDIVIQRIKTMEFKRK 245 >gi|332299226|ref|YP_004441147.1| NAD+ synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332176289|gb|AEE11979.1| NAD+ synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 647 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 141/622 (22%), Positives = 251/622 (40%), Gaps = 89/622 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + +A G++++ EL I+GY DL + ++ Sbjct: 6 VKVAAAVPYVRVADCYYNTSRIKEMIFQAEELGVEILTTPELSITGYTCGDLFHQSFLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L +T + ++VG P + +E + N V G I+ K LPNY EF Sbjct: 66 QAQKALCQLVEETAETDVMVIVGMPVKVEEKLFNGAVAFQHGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S I+F+ + +GI ICED+W L G Sbjct: 126 EKRWFSPSDSLQYKTVQMGPHTVPIGRNIIFKCGQVGIGIEICEDMWTPFTPGTRLSLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K +++G S +Y + G+ +L++ G +F + Sbjct: 186 AHIIFNLSASNENAGKHDYLRSLISGATSQSICGYVYASSGYGESSTDLVYTGKAFIAE- 244 Query: 226 QQQLAFQMKHFSEQNFM-------TEWHYDQQL-----SQWNYMSDDS--ASTMYIPLQE 271 ++ +M+ F + M + H ++ + S N+ +D+ S + E Sbjct: 245 VGKIVKEMRRFEYKERMIVSDIDVSRIHGERLINSSFKSAVNHFTDEEELVSIPFTLRSE 304 Query: 272 EEAD-------------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 EE+ + V L ++ +IG+SGG+DSA Sbjct: 305 EESQPMDRIIERNPFMPEGANPEERCHEMFQIQVCGLIQRLKHMRAEHAVIGISGGLDSA 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + +A L ++ + + +P TS ++ + + LG + I + Sbjct: 365 LALLVTAEAFDLLGLDRKQIIAVTMPGFGTSERTYRNGYTMMQELGVTIREIDIKEATEQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 S + E + EN Q+R R ILM L+N A ++ T + SEI++G+ T GD Sbjct: 425 HLSAIDYKGNREDATF--ENAQARERTQILMDLANMYHAPVIGTGDLSEIALGWCTFNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V + W +H +G PL + I+ S EL P Sbjct: 483 HMSMYAVNSGITKTSVQLIVGWYATH--QAGDTPLATTL-QDIVATPISPELLPIKDTKA 539 Query: 476 --HQTDQESLPPYPILDDIIKRIV----ENEESF----INNDQEYNDETVRYVEHL---- 521 Q Q+ + PY + D I + E ++ F + + Y + +++ + Sbjct: 540 GSEQQTQDLVGPYELHDFFIYHFLLDGFEPKKIFYLAKVAFEGAYTPQEIKHWMGVFFKR 599 Query: 522 LYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ + S Sbjct: 600 FFSQQFKRNAMPDGPKVQSVSL 621 >gi|313887332|ref|ZP_07821023.1| NAD+ synthase [Porphyromonas asaccharolytica PR426713P-I] gi|312923251|gb|EFR34069.1| NAD+ synthase [Porphyromonas asaccharolytica PR426713P-I] Length = 647 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 141/622 (22%), Positives = 251/622 (40%), Gaps = 89/622 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + +A G++++ EL I+GY DL + ++ Sbjct: 6 VKVAAAVPYVRVADCYYNTSRIKEMIFQAEELGVEILTTPELSITGYTCGDLFHQSFLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L +T + ++VG P + +E + N V G I+ K LPNY EF Sbjct: 66 QAQKALCQLVEETAETDVMVIVGMPVKVEEKLFNGAVAFQHGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S I+F+ + +GI ICED+W L G Sbjct: 126 EKRWFSPSDSLQYKTVQMGPHTVPIGRNIIFKCGQVGIGIEICEDMWTPFTPGTRLSLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K +++G S +Y + G+ +L++ G +F + Sbjct: 186 AHIIFNLSASNENAGKHDYLRSLISGATSQSICGYVYASSGYGESSTDLVYTGKAFIAE- 244 Query: 226 QQQLAFQMKHFSEQNFM-------TEWHYDQQL-----SQWNYMSDDS--ASTMYIPLQE 271 ++ +M+ F + M + H ++ + S N+ +D+ S + E Sbjct: 245 VGKIVKEMRRFEYKERMIVSDIDVSRIHGERLINSSFKSAVNHFTDEEELVSIPFTLRSE 304 Query: 272 EEAD-------------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 EE+ + V L ++ +IG+SGG+DSA Sbjct: 305 EESQPMDRVIERNPFMPEGANPEERCHEMFQIQVCGLIQRLKHMRAEHAVIGISGGLDSA 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + +A L ++ + + +P TS ++ + + LG + I + Sbjct: 365 LALLVTAEAFDLLGLDRKQIIAVTMPGFGTSERTYRNGYTMMQELGVTIREIDIKEATEQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 S + E + EN Q+R R ILM L+N A ++ T + SEI++G+ T GD Sbjct: 425 HLSAIDYKGNREDATF--ENAQARERTQILMDLANMYHAPVIGTGDLSEIALGWCTFNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V + W +H +G PL + I+ S EL P Sbjct: 483 HMSMYAVNSGITKTSVQLIVGWYATH--QAGDTPLATTL-QDIVATPISPELLPIKDTKA 539 Query: 476 --HQTDQESLPPYPILDDIIKRIV----ENEESF----INNDQEYNDETVRYVEHL---- 521 Q Q+ + PY + D I + E ++ F + + Y + +++ + Sbjct: 540 GSEQQTQDLVGPYELHDFFIYHFLLDGFEPKKIFYLAKVAFEGAYTPQEIKHWMGVFFKR 599 Query: 522 LYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ + S Sbjct: 600 FFSQQFKRNAMPDGPKVQSVSL 621 >gi|313125263|ref|YP_004035527.1| nh(3)-dependent NAD(+) synthetase [Halogeometricum borinquense DSM 11551] gi|312291628|gb|ADQ66088.1| NH(3)-dependent NAD(+) synthetase [Halogeometricum borinquense DSM 11551] Length = 277 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 20/280 (7%) Query: 257 MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 +SD + + + E EA +N + +RD V ++GLSGGIDS A +A +AL Sbjct: 8 LSDTAPLDLRLSDDELEATHNHILQFIRDVVDGAGAEGAVLGLSGGIDSTATAYLAAEAL 67 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 GKEN+ +++P S +++ DA A+ L +YDV+ I + FF + + Sbjct: 68 GKENLHGLVMPSVVNSDENMSDAERVAQELEIEYDVVEIQPIAETFFDTFPEAANDR--- 124 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 + A N+ R+RG + ++NH ++L T N+SE GY T YGD + NP+ +LYK Q Sbjct: 125 MAAGNVYVRVRGVLNYFVANHENKIVLGTGNRSEALTGYFTKYGDQAVDCNPIGNLYKQQ 184 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKR 495 V QLA+ +P ++ K+PSA + QTD++ + Y LD I+ Sbjct: 185 VRQLAAHVG--------------VPQDLVMKTPSAGMWTGQTDEDEMGMHYDTLDAILAL 230 Query: 496 IVEN--EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 V+ +S + + E + V L S +KR+ P Sbjct: 231 HVDGPLSKSATMDHIDVTGEQIDRVVELYEQSAHKRQMPP 270 >gi|269958040|ref|YP_003327829.1| NAD(+) synthase (glutamine-hydrolyzing) [Xylanimonas cellulosilytica DSM 15894] gi|269306721|gb|ACZ32271.1| NAD(+) synthase (glutamine-hydrolyzing) [Xylanimonas cellulosilytica DSM 15894] Length = 682 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 133/565 (23%), Positives = 235/565 (41%), Gaps = 87/565 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V D A N A + +G+ + +F EL ++GY +DL + ++A Sbjct: 16 RVAAVTVPVRVADPAANAAVVVEQARACHGEGVAVAVFPELCLTGYAIDDLFLQDPLLEA 75 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + A+ + + D +VVG P + VLN ++ G I+ V K LP Y EF+E Sbjct: 76 AADALAVVVDASADLMTVLVVGLPLEAGGRVLNCAAVVHRGRILGVAPKSYLPTYREFYE 135 Query: 126 KRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLKK 165 +R F G R +R+ + +CED+W Sbjct: 136 RRWFAPGDDRRGATIRVLGEDVPFGPDLIFEASDVAGLRVHVEVCEDMWVPVPPSAEAAL 195 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ASP + + R +V + +Y G+ +L +DG + + Sbjct: 196 AGATVLANLSASPITVARAEDRRLMVRSASARCSAAYVYAAAAQGESSTDLSWDGQTMVY 255 Query: 224 ---------------------------------------DGQQQLAFQMKHFSEQNF--- 241 D ++ LA + F F Sbjct: 256 ECGDLLGESERFPDGPRRTVVDVDLDRLRQERLRQGTFDDNRRTLAARTGSFRTVGFELA 315 Query: 242 --MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ +++ ++ ++ DD+ + L EA YN V +L + K++IG+ Sbjct: 316 PPSSDLGLRRKVDRFPFVPDDAER---LALDCYEA-YNIQVTALEQRLTSIGRPKIVIGV 371 Query: 300 SGGIDSA---LCAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS + AA A+D LG+ E++ LP T ++ + A ++LG ++ + Sbjct: 372 SGGLDSTHALIVAAKAMDRLGRPREDILAYTLPGFATGTETKDRAWRLGRSLGVSFEEID 431 Query: 355 IHDLVNHFFS-LMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I + L F + EP + EN+Q+ +R + L L+NH+ ++L T + SE++ Sbjct: 432 IRPAATQLLTDLGHPFGRGEPVYDVTFENVQAGLRTDYLFRLANHNGGIVLGTGDLSELA 491 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +G+ T GD + + KT + L W S TS G T+ + IL++ S Sbjct: 492 LGWATYGVGDQMSHYVINSGVPKTLIQHLIRWVIS---TSQFGAETDTVLAEILDQEISP 548 Query: 472 ELRPH------QTDQESLPPYPILD 490 EL P Q+ + + PYP+ D Sbjct: 549 ELVPAGADGALQSTEAKIGPYPLQD 573 >gi|289582495|ref|YP_003480961.1| NAD+ synthetase [Natrialba magadii ATCC 43099] gi|289532048|gb|ADD06399.1| NAD+ synthetase [Natrialba magadii ATCC 43099] Length = 264 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 84/254 (33%), Positives = 130/254 (51%), Gaps = 20/254 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD + ++GLSGGIDS L A +A DALG ENV ++LP + +++ DA Sbjct: 22 IRDQIDTAGADGAVLGLSGGIDSTLTAYLAADALGAENVHGLVLPAVVSGDENMSDAERV 81 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A LG +D++ I +V+ SL+S + + E N ++R+R + ++NH ++ Sbjct: 82 ALDLGLPHDLIEIEPIVD---SLLSAYPEAEGDREAVGNARARVRAVLNYLVANHENRLV 138 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T N+SE +VGY T YGD + +P+ +LYK QV QLA +P Sbjct: 139 LGTGNRSEAAVGYFTKYGDGAVDCHPIGNLYKAQVRQLARHVG--------------VPE 184 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYN--DETVRYVE 519 + K +AEL QTD++ + Y LD I+ V+ S +E + ETV V Sbjct: 185 DLAAKPATAELWADQTDEDEMGLSYETLDSILVTHVDGPLSVAATCRELDVEPETVERVR 244 Query: 520 HLLYGSEYKRRQAP 533 + SE+KR+ P Sbjct: 245 EMYQHSEHKRQVPP 258 >gi|303235630|ref|ZP_07322237.1| NAD+ synthase [Prevotella disiens FB035-09AN] gi|302484077|gb|EFL47065.1| NAD+ synthase [Prevotella disiens FB035-09AN] Length = 651 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 135/561 (24%), Positives = 238/561 (42%), Gaps = 79/561 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + D N+ + A QG+++I+F E I+GY +DL ++ + Sbjct: 6 IKVATAIPEVRIADTKFNLEAIEKQIVMAEGQGVEIIVFPEFCITGYTCQDLFRQQQLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L T +VG P +LN V++ G I+ + K LPNY+EF+ Sbjct: 66 DAERAMLRLLDFTRQLDIIAIVGTPVSVGSILLNCAVVVQHGKILGIVPKTYLPNYAEFY 125 Query: 125 EKRTFISGY----------------SNDPIVFRD---IRLGILICEDIWKNSNICKHLKK 165 EKR F S + + +P ++R ++ GI ICEDIW L Sbjct: 126 EKRWFASAFDMSPTKVHYAGQLLPITPEPQIYRTADGVKFGIEICEDIWSPIPPSSVLTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K ++ Q + +Y + G+ +++F G +F + Sbjct: 186 DGAEIIFNLSASTEQIGKHSYLEALLAQQSARTLSAYVYSSCGFGESTQDVVFGGNAFVY 245 Query: 224 DGQQQLA----FQM------------KHFSEQNFMTEWHYDQQ------LSQWNY----- 256 + QLA FQM K SE+ T + Q + Y Sbjct: 246 ENGVQLASAKRFQMESQVVICDIDIEKLRSERRLNTTFVNAQHNLFVLPVGSGTYEKKYI 305 Query: 257 --MSDDSASTMYIP---------LQEEEAD------YNACVLSLRDYVQKNNFHKVIIGL 299 M ++A ++ LQ E D +N V L + V++G+ Sbjct: 306 DCMPKENAEREFVLNRNIAPQPFLQGETIDAACEEAFNIQVTGLAKRLLHIKCKTVVLGI 365 Query: 300 SGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + ++A ++++ + +P TS ++ +A + LG + Sbjct: 366 SGGLDSTLALLVCIEAFDRLKFDRKDILAVTMPGFGTSDRTHNNALLLMQELGVTMKEIS 425 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I V F + + + + EN Q+R R ILM L+N +++ T + SE+++G Sbjct: 426 IVPSVTQHFKDIEHDINVQDA--TYENAQARERTQILMDLANEYNGLVIGTGDLSELALG 483 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQL----ASWRNSHGITSGLGPLTEV-IPPSILEKSP 469 + T GD + + KT V QL A+ ++ + L + + I P ++ + Sbjct: 484 WCTYNGDHMSMYAVNGSVPKTLVKQLVGYVANQTDNVKVAESLRDIVDTPISPELVPTNE 543 Query: 470 SAELRPHQTDQESLPPYPILD 490 S E++ Q ++ + PY + D Sbjct: 544 SGEVQ--QKTEDIVGPYELHD 562 >gi|262196819|ref|YP_003268028.1| NAD+ synthetase [Haliangium ochraceum DSM 14365] gi|262080166|gb|ACY16135.1| NAD+ synthetase [Haliangium ochraceum DSM 14365] Length = 704 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 132/547 (24%), Positives = 220/547 (40%), Gaps = 79/547 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D A N A+ A++Q ++LF EL +S Y EDL + + + Sbjct: 13 VRAAVAVPEVRVADPAFNAARTCELARRASQQHAAVLLFPELGLSAYSNEDLFHQDALLD 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + +++G P + + + N V + G I+ V K LPNY EF+ Sbjct: 73 GVLAALQTVLEASETLSPLLLLGAPLRFRGALFNCCVAVYHGRILGVTPKSYLPNYREFY 132 Query: 125 EKRTFISG----------------YSNDPIVFRDIRLGIL----ICEDIWKNSNICKHLK 164 EKR F + + ND + D G ICED+W + Sbjct: 133 EKRQFTAARCALLEEVTLLGQTVPFGNDIVYEADSLPGFAVHAEICEDVWTPIPPSTYAA 192 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K R ++ +Y G+ +L +DG + Sbjct: 193 LAGATVLANLSASNITIGKADYRRDLCAAHSGRCVAAYLYSAAGPGESTTDLAWDGQALI 252 Query: 223 FDGQQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMS----------------------- 258 ++ LA + H SEQ + ++ L + ++ Sbjct: 253 YENDLLLAEAERFHPSEQLIFADVDIERLLQERMRLTSFQDTIADHGERVRAVRRVRFAF 312 Query: 259 --------DDSASTM--------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVI 296 +D A T+ ++P + D YN V L + K++ Sbjct: 313 QVPQDAQPEDRAPTLRRALDRFPFVPSDDAARDERCYEAYNIQVHGLLQRLASTGIDKLV 372 Query: 297 IGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 IG+SGG+DS + AA +D L +EN+ +P TS ++L +A A ALG Sbjct: 373 IGVSGGLDSTHALIVAAKTMDRLDLPRENILAYTMPGFATSERTLRNAHALMSALGATAR 432 Query: 352 VLPIHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + I + + EE + EN+Q+ R + L L+NH+ ++L T + S Sbjct: 433 EIDIRPSCRQMLADLDHPFARGEEVYDVTFENVQAGERSSHLFRLANHNGGLVLGTGDLS 492 Query: 410 EISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E+++G+ T GD +N + KT + L W +G+ L P + IL Sbjct: 493 ELALGWCTYGVGDQMSHYNVNASVPKTLIQHLVRWVADNGV---LNPAASEVLRDILATE 549 Query: 469 PSAELRP 475 S EL P Sbjct: 550 ISPELVP 556 >gi|167751679|ref|ZP_02423806.1| hypothetical protein EUBSIR_02685 [Eubacterium siraeum DSM 15702] gi|167655487|gb|EDR99616.1| hypothetical protein EUBSIR_02685 [Eubacterium siraeum DSM 15702] Length = 648 Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 142/622 (22%), Positives = 259/622 (41%), Gaps = 97/622 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + +E ++ + L +F EL I+GY +DL ++ + + Sbjct: 6 IKVAAATPEIKVADCKHNAKQIISLAKELAKKDVKLAVFPELCITGYTCQDLFYQTTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + + VVG P Q + N + G ++ K LPNY+EF+ Sbjct: 66 GAKNALVTILEELSELDMITVVGLPMQFDSKLYNCAAVTYHGKVLGYVPKQYLPNYNEFY 125 Query: 125 EKRTF--------------------------ISGYSNDPIVF-----RDIRLGILICEDI 153 E R F +S Y ++F D GI +CED+ Sbjct: 126 EMRHFTAWDGSKCEYFLNRFDTDADGECDDSLSAYFGAGLIFCCNTMHDFSFGIELCEDL 185 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD- 212 W +L ++GA + +L+AS K + R +V Q + + IY + G+ Sbjct: 186 WSPCPPSTYLAQEGANIILNLSASNEMIGKSEYRRSLVLNQSARLISGYIYCSAGEGEST 245 Query: 213 -ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE--------------------------W 245 +L+F G + + LA + + FS ++E W Sbjct: 246 QDLVFSGHNIIAENGATLA-ESELFSNDYIISEIDVNKLAFERRKNTSFRNDKCDTETIW 304 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA-CVLSLRDYVQKNNF-----HKVIIGL 299 +D L+ ++ + T +IP +E D +LS++ + K +IG+ Sbjct: 305 -FDIPLTD-TKITRFVSRTPFIPYSADETDKRCELILSMQAHGLKKRLAHTYAKTAVIGI 362 Query: 300 SGGIDSALCAAIAVDA---LGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + +A LG+ ++ + +P T+ ++ +A +A+G + Sbjct: 363 SGGLDSTLALLVCANAMKLLGRPMTDIVAVTMPCFGTTKRTKSNAVKICEAIGVTLREID 422 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I D V F + + + +V EN Q+R R +LM ++N + +++ T + SE+++G Sbjct: 423 ITDSVKQHFLDIGHDIND--LSVVFENGQARERTKVLMNIANQTGGLVIGTGDLSELALG 480 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT + L S+ + T+ L E + IL+ S EL Sbjct: 481 WATYNGDHMSMYGVNCSIPKTLIKHLVSY---YSKTTDNKLLKESL-EDILDTPVSPELL 536 Query: 475 P------HQTDQESLPPYPILD----DIIKRIVENEESF----INNDQEYNDETV----R 516 P Q ++ + PY + D + I+ E+ F D Y+ ET+ + Sbjct: 537 PAHNGEISQKTEDLVGPYELHDFFLYNGIRWGFTPEKVFRLALYAFDGAYDRETILKWLK 596 Query: 517 YVEHLLYGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 597 TFYRRFFSQQFKRSCLPDGPKV 618 >gi|153951376|ref|YP_001398269.1| NAD+ synthetase [Campylobacter jejuni subsp. doylei 269.97] gi|189030352|sp|A7H439|NADE_CAMJD RecName: Full=NH(3)-dependent NAD(+) synthetase gi|152938822|gb|ABS43563.1| NAD+ synthetase [Campylobacter jejuni subsp. doylei 269.97] Length = 246 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 128/224 (57%), Gaps = 23/224 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ + V++GLSGGIDSAL A + AL KENV ++P + ++ +LEDA Sbjct: 14 IQEKVKNSQSQGVVLGLSGGIDSALVATLCKRAL-KENVFAFLMPTQISNKTNLEDALRL 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 L +Y ++ I +++ F Q E + +V+ N +RIR ++L S ++ Sbjct: 73 CVDLNLEYKIIEIQSILDAFIK------QSENTTLVSLGNFAARIRMSLLYDYSAMKNSL 126 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ TSNKSE+ +GYGT+YGD++ FNP+ LYK++++ LA + N H Sbjct: 127 VIGTSNKSELLLGYGTIYGDLAYAFNPIGSLYKSEIYALAKYLNLH-------------- 172 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + ++K+PSA+L +QTD+ L Y +D+ +K + N+E + Sbjct: 173 ENFIKKTPSADLWENQTDEADLGFSYAKIDEGLKALETNDEKLL 216 >gi|296273405|ref|YP_003656036.1| NAD+ synthetase [Arcobacter nitrofigilis DSM 7299] gi|296097579|gb|ADG93529.1| NAD+ synthetase [Arcobacter nitrofigilis DSM 7299] Length = 252 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 128/224 (57%), Gaps = 22/224 (9%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 ++ L+D V+K +V +GLSGG+DSA+ A ++ +A G N+ +++P Y+S S+ A Sbjct: 11 IVFLKDEVKKAGLERVTVGLSGGLDSAIVAILSKEAFGA-NMSCVLMPSHYSSEGSISHA 69 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 K ++++ I +V + M + + N +R+R ++L +S K Sbjct: 70 LEVCKKFDIDHEIVEIAPMVEAYEKFM------DGDKLRIGNFSARMRMSVLYDVSARDK 123 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++++ TSNKSEI +GYGT+YGD++ NP+ ++YK+ ++ + LG Sbjct: 124 SLVVGTSNKSEILLGYGTIYGDVACAINPIGEMYKSDEYEFGKF---------LG----- 169 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES 502 +P SILEK PSA+L Q+D++ L Y +D+I+K++V+ + S Sbjct: 170 VPESILEKRPSADLWEGQSDEDELGYSYKQMDEILKKLVDEKVS 213 >gi|197303706|ref|ZP_03168743.1| hypothetical protein RUMLAC_02435 [Ruminococcus lactaris ATCC 29176] gi|197297226|gb|EDY31789.1| hypothetical protein RUMLAC_02435 [Ruminococcus lactaris ATCC 29176] Length = 636 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 117/496 (23%), Positives = 211/496 (42%), Gaps = 60/496 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N R EEA + +++F EL ++GY DL ++ Sbjct: 6 VKVAAATPDIRVADVEFNKENICRGIEEAEKANAKILVFPELCVTGYTCSDLFDHAVLLK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + T D + VG P + + N L+ G I+ + K LPNY EF+ Sbjct: 66 AAKKALLEIAEFTRDRDLLVFVGVPLEVDGKLYNVAAALNHGKILGLTTKTFLPNYGEFY 125 Query: 125 EKRTFISG--------YSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F G ++ + I F D+ + ICED+W Sbjct: 126 EMRQFTPGPEKARYISFNGEEIPFGPQILFQAAEMEDLIVAAEICEDVWSPVPPSIGAAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R E++ GQ + + IY N G+ +L+F G + Sbjct: 186 EGATVIVNCSASDETIGKDTYRRELIAGQSARLIAGYIYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSE----------------QNFMTEWHYDQQLSQWNYMSDDSASTM-- 265 + L ++ +E +N + ++ L + + + +++ Sbjct: 246 ENGTILKESGRYRNEIIYSEFDLERITGERRKNTTFQTAKERSLIRVGFQIEKGETSLTR 305 Query: 266 ------YIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC---A 309 ++P +E+ C + L+ + N ++G+SGG+DS L Sbjct: 306 TFPKKPFVP-SDEQTRAARCEEILTIQAMGLKKRLAHTNARTAVVGISGGLDSTLALLVT 364 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A A D LG K+++ + +P T+ ++ ++A +K +G +PI + VN F + Sbjct: 365 AKAFDMLGRDKKDILAVTMPCFGTTDRTYQNACEMSKKVGATLIEVPIAEAVNIHFRDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 E + EN Q+R R +LM L+N + M++ T + SE+++G+ T GD + Sbjct: 425 H--DPEDHSVTYENGQARERTQVLMDLANKTWGMVIGTGDMSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASW 443 + KT V L + Sbjct: 483 VNASVPKTLVRHLVKY 498 >gi|240102131|ref|YP_002958439.1| NAD synthetase [Thermococcus gammatolerans EJ3] gi|239909684|gb|ACS32575.1| NH(3)-dependent NAD synthetase (nadE) [Thermococcus gammatolerans EJ3] Length = 254 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 94/272 (34%), Positives = 145/272 (53%), Gaps = 32/272 (11%) Query: 273 EADYNACVLSLRDYVQKN----NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 E +Y + L ++Q+ + V+IG+SGG+DSA A +AV ALG+E V +++PY Sbjct: 3 ELNYGEVIEKLVSFIQEKVGEAKSNGVVIGISGGVDSATTAYLAVKALGRERVLGLIMPY 62 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 + Q ++DA +LG + + I +V+ F + L +P NI SR R Sbjct: 63 --YNNQDVDDARLVCSSLGIECREIGIKPIVDSFVA----GLGFQPDKRSLGNIMSRTRM 116 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +L A +N ++L T N+SE GY T +GD + + PL +LYKT+V+++A Sbjct: 117 VLLYAHANAKNYLVLGTGNRSEFLTGYFTKWGDGASDYAPLINLYKTEVWEVAKL----- 171 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE----NEESF 503 LG +P I+EK P A L QTD++ L Y +LD+I+ R+V+ EE Sbjct: 172 ----LG-----VPERIIEKKPRAGLWEGQTDEDELGISYRLLDEILWRLVDLKMPKEE-- 220 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 I + E V YVE+L+ SE+KRR P+G Sbjct: 221 IAGELGIPVERVEYVENLVRRSEHKRR-LPLG 251 >gi|154174972|ref|YP_001408055.1| NAD+ synthetase [Campylobacter curvus 525.92] gi|112802897|gb|EAU00241.1| NAD+ synthetase [Campylobacter curvus 525.92] Length = 250 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 82/260 (31%), Positives = 144/260 (55%), Gaps = 28/260 (10%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 L++Y+ K + K ++IG+SGGIDSA+ A + A+ K N +++P +S ++++DA Sbjct: 15 LKNYITKKSKSKNLLIGVSGGIDSAVVATLCAAAMPK-NTHALIMPTNASSTKNIDDALN 73 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 K LG + +L I +++ F + + + + G N+ +R+R ++L S A+ Sbjct: 74 LCKKLGLNFKILNIQAILDAFGDSIGEDIDKLRKG----NLSARVRMSLLYDYSASINAL 129 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ TSNKSE+ +GYGT++GD++ NP+ +LYKT++F+ A + LG + Sbjct: 130 VVGTSNKSELMLGYGTIFGDLACAINPIGELYKTEIFEFAKY---------LG-----VD 175 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE--ESFINNDQEYNDETVRYV 518 +I+ K+PSA+L Q+D+ + Y +D+I+K I S Q+ DE V+ V Sbjct: 176 ENIINKAPSADLWDGQSDEADIGYTYETIDEILKGIAGGNLGASVDKFGQDTVDEIVKRV 235 Query: 519 EHLLYGSEYKRRQAPVGTKI 538 E S +RQ P+ KI Sbjct: 236 E-----SNKFKRQMPLIAKI 250 >gi|228470873|ref|ZP_04055718.1| glutamine-dependent NAD+ synthetase [Porphyromonas uenonis 60-3] gi|228307270|gb|EEK16284.1| glutamine-dependent NAD+ synthetase [Porphyromonas uenonis 60-3] Length = 647 Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 144/622 (23%), Positives = 253/622 (40%), Gaps = 89/622 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + +A G++++ EL I+GY DL + + Sbjct: 6 VKVAAAVPYVRVADCYYNTSRIKEMIFQAEELGVEILTTPELSITGYTCGDLFHQSFLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L +T + ++VG P + +E + N V G I+ K LPNY EF Sbjct: 66 QAQKALCQLVEETAETDVMVIVGMPVKVEEKLFNGAVAFQHGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTFIS-----------GYSNDP----IVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F G P I+F+ + +GI ICED+W L G Sbjct: 126 EKRWFSPSDSLQYKTVQMGSHTVPIGRNIIFKCGQVGIGIEICEDMWTPFTPGTRLSLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K +++G S +Y + G+ +L++ G +F + Sbjct: 186 AHIIFNLSASNENAGKHDYLRSLISGATSQSICGYVYASSGYGESSTDLVYTGKAFIAE- 244 Query: 226 QQQLAFQMKHFSEQNFM-------TEWHYDQQL-----SQWNYMSDD------------S 261 ++ +M+ F + M + H ++ + S N+ +D+ Sbjct: 245 VGKIVKEMRRFEYKERMIVSDIDVSRIHGERLINSSFKSAVNHFTDEEELESIPFTLRSE 304 Query: 262 ASTMYI-------PLQEEEAD--------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 A + + P E A+ + V L ++ +IG+SGG+DSA Sbjct: 305 AKSQPMDRVIDRNPFMPEGANPEERCHEMFQIQVCGLIQRLKHMRAEHAVIGISGGLDSA 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + +A L ++ + + +P TS ++ + A +ALG + I + Sbjct: 365 LALLVTAEAFDLLGLDRKQIIAVTMPGFGTSERTYRNGYAMMQALGVTIREIDIKEATEQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 S + E + EN Q+R R ILM L+N A ++ T + SEI++G+ T GD Sbjct: 425 HLSAIDYKGNREDATF--ENAQARERTQILMDLANMYHAPVIGTGDLSEIALGWCTFNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V + W +H +G PL + I+ S EL P Sbjct: 483 HMSMYAVNSGITKTSVQLIVGWYATH--KAGDTPLATTL-QDIVATPISPELLPIKDTKT 539 Query: 476 --HQTDQESLPPYPILDDIIKRIV----ENEESF----INNDQEYNDETVRYVEHL---- 521 Q Q + PY + D I + E ++ F + + Y + +++ + Sbjct: 540 GNEQQTQNLVGPYELHDFFIYHFLLDGFEPKKIFYLAKVAFEGAYTPQEIKHWMGVFFKR 599 Query: 522 LYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ + S Sbjct: 600 FFSQQFKRNAMPDGPKVLSVSL 621 >gi|157415081|ref|YP_001482337.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|189030351|sp|A8FLM3|NADE_CAMJ8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|157386045|gb|ABV52360.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|307747723|gb|ADN90993.1| NH(3)-dependent NAD(+) synthetase [Campylobacter jejuni subsp. jejuni M1] gi|315932509|gb|EFV11446.1| NH(3)-dependent NAD(+) synthetase [Campylobacter jejuni subsp. jejuni 327] Length = 246 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 129/224 (57%), Gaps = 23/224 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ + V++GLSGGIDSAL A + AL KENV +++P + ++ +LEDA Sbjct: 14 IQEKVKNSQSQGVVLGLSGGIDSALVATLCKRAL-KENVFALLMPTQISNKANLEDALRL 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 L +Y ++ I +++ F Q E + +V+ N +RIR ++L S ++ Sbjct: 73 CADLNLEYKIIEIQSILDAFIK------QSENTTLVSLGNFAARIRMSLLYDYSALKNSL 126 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ TSNKSE+ +GYGT+YGD++ FNP+ LYK++++ LA + N H Sbjct: 127 VIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKSEIYTLAKYLNLH-------------- 172 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + ++K+PSA+L +Q+D+ L Y +D+ +K + N+E + Sbjct: 173 ENFIKKAPSADLWENQSDEADLGFSYAKIDEGLKALETNDEKLL 216 >gi|225377677|ref|ZP_03754898.1| hypothetical protein ROSEINA2194_03328 [Roseburia inulinivorans DSM 16841] gi|225210472|gb|EEG92826.1| hypothetical protein ROSEINA2194_03328 [Roseburia inulinivorans DSM 16841] Length = 640 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 133/616 (21%), Positives = 258/616 (41%), Gaps = 89/616 (14%) Query: 2 LKKLKIAIAQLNP--VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K+ + +A + P VV D N A ++A ++G +I+ EL I+GY DL + Sbjct: 1 MKQGFVKVAAVTPKIVVADTKENTALICAEIKKAEKEGAKIIVLPELCITGYTCSDLFLQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + ++ ++ + + T + VG P + + N + G ++ K LPN Sbjct: 61 EKMLREARQSLLEIAAFTFALDCIVFVGLPLEYNGKLYNVAAAVSNGKVLGFVPKTYLPN 120 Query: 120 YSEFHEKRTFISGYS--------------NDPIVFR-----DIRLGILICEDIWKNSNIC 160 Y+EF+E R F G ++F ++++G+ +CED+W Sbjct: 121 YNEFYEARHFTRGMEEMVQVSLGEEVVPMGKKLLFTCQTMPELKIGVELCEDLWTPEPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 GA + +L+AS K R E+V GQ + + IY + G+ ++++ Sbjct: 181 IRHALNGANVIVNLSASDETTGKDIYREELVGGQSARLLCGYIYASAGDGESTQDVVYSA 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD-----DSASTMYIPLQEEE 273 + + + L + K F+ + +E + ++ M+ D + + L+ EE Sbjct: 241 HNIIAENGRILK-KAKRFANETVYSEIDVLRLNAERRRMTTFETRMDGYTEIPFALKIEE 299 Query: 274 ADYNACV-------------------------LSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + + + L+ ++ + +IG+SGG+DS L Sbjct: 300 TELTRYIDPMPFVPGSKTDRERRCDEILSIQAMGLKKRLEHTHCKSAVIGISGGLDSTLA 359 Query: 309 AAIAV---DALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V D LG + N++ + +P T+ ++ ++A + K L + + I D VN F Sbjct: 360 LLVTVRAFDLLGMDHKNIKAVTMPGFGTTDRTYDNAVSLIKCLNADFMEVSIRDAVNIHF 419 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + Q + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 420 RDIGQ--DPKVHDVTYENGQARERTQILMDIANKTGGMVIGTGDLSELALGWATYNGDHM 477 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQ 477 + + KT V L + + T G L E + +L+ S EL P Q Sbjct: 478 SMYAVNASVPKTLVRHLVRY---YADTCGDEAL-EAVLLDVLDTPVSPELLPPEDGKISQ 533 Query: 478 TDQESLPPYPILDDIIKRIVE-----------NEESFINNDQEYNDETV----RYVEHLL 522 ++ + PY + D + ++ + +F+ Y+DET+ + Sbjct: 534 KTEDLVGPYELHDFYLYHMLRLGYAPAKIYRLAKVAFVGT---YDDETILKWLKTFYRRF 590 Query: 523 YGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 591 FAQQFKRSCLPDGPKV 606 >gi|57237655|ref|YP_178903.1| NAD+ synthetase [Campylobacter jejuni RM1221] gi|86152105|ref|ZP_01070317.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|86153555|ref|ZP_01071759.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613744|ref|YP_001000499.1| NAD synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005435|ref|ZP_02271193.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|205356779|ref|ZP_03223538.1| NH(3)-dependent NAD(+) synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|315124332|ref|YP_004066336.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|81675595|sp|Q5HUY2|NADE_CAMJR RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030353|sp|A1VZF8|NADE_CAMJJ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|57166459|gb|AAW35238.1| NAD+ synthetase [Campylobacter jejuni RM1221] gi|85840890|gb|EAQ58140.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|85843281|gb|EAQ60492.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249363|gb|EAQ72323.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|205345346|gb|EDZ31990.1| NH(3)-dependent NAD(+) synthetase [Campylobacter jejuni subsp. jejuni CG8421] gi|315018054|gb|ADT66147.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058264|gb|ADT72593.1| NAD synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 246 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 129/224 (57%), Gaps = 23/224 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ + V++GLSGGIDSAL A + AL KENV +++P + ++ +LEDA Sbjct: 14 IQEKVKNSQSQGVVLGLSGGIDSALVATLCKRAL-KENVFALLMPTQISNKANLEDALRL 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 L +Y ++ I +++ F Q E + +V+ N +RIR ++L S ++ Sbjct: 73 CADLNLEYKIIEIQSILDAFIK------QSENTTLVSLGNFAARIRMSLLYDYSALKNSL 126 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ TSNKSE+ +GYGT+YGD++ FNP+ LYK++++ LA + N H Sbjct: 127 VIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKSEIYALAKYLNLH-------------- 172 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + ++K+PSA+L +Q+D+ L Y +D+ +K + N+E + Sbjct: 173 ENFIKKAPSADLWENQSDEADLGFSYAKIDEGLKALETNDEKLL 216 >gi|288928465|ref|ZP_06422312.1| glutamine-dependent NAD+ synthetase [Prevotella sp. oral taxon 317 str. F0108] gi|288331299|gb|EFC69883.1| glutamine-dependent NAD+ synthetase [Prevotella sp. oral taxon 317 str. F0108] Length = 647 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 141/622 (22%), Positives = 263/622 (42%), Gaps = 87/622 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + ++AN QG ++++F EL I+GY +DL ++ I+ Sbjct: 6 IKVAAAIPAVKVADCHFNAEQTEQQIKQANEQGAEIVVFPELGITGYTCQDLFTQQLLIE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L +T VVG P +LN V+ G+I+ + K LPNYSEF+ Sbjct: 66 QAELAVGSLLENTKTLDIIAVVGVPVAVDSILLNCAVVFQRGHILGIVPKTYLPNYSEFY 125 Query: 125 EKRTFISGY-------------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F S + S + ++ G+ ICED+W + +L Sbjct: 126 EKRWFASTHHLNETSIHYAGQQALLTAQSQIFVTADGVKFGVEICEDVWAPNPPGTYLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV---------NQVGGQDELIF 216 GA+ + +L+AS K ++ Q + +Y + V G + LI+ Sbjct: 186 AGADIVCNLSASDELIGKHTYLKSLLAQQSARTMAGYVYSGCGFGESTQDVVYGGNALIY 245 Query: 217 DGASFC-----FDGQQQLA------FQMK--------HFSEQNFMTEWHYDQQ--LSQWN 255 + FD + Q+ F+++ + + Q+ T + Q L+ Sbjct: 246 ENGKLLTQNKRFDFEPQIVVSEIDIFKLRAERRTNSTYVNAQHGHTALLHTAQAPLTNKP 305 Query: 256 YMSDDSASTM-YIPLQEEEAD-----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 + + + ++P E+ D +N V L ++ + KV++G+SGG+DS L Sbjct: 306 FALQRTIDPLPFVPQDEQMYDSCEEIFNIQVSGLAQRLKHIHASKVVLGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V D LG +E + + +P T+ ++ +A + LG + I V F Sbjct: 366 LVCVRTFDKLGLSREGIIGVTMPGFGTTNRTYRNAIDLMRELGITTHEINIAKSVTQHFE 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + +V EN Q+R R ILM L N +++ T + SE+++G+ T GD Sbjct: 426 DIGHDMAVH--DVVYENGQARERTQILMDLGNKLGGIVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GF----NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAELRPHQTD 479 + + K L K V +A ++ L + + I P ++ + ++ Q Sbjct: 484 MYAVNVSIPKTLIKHLVRHVAQTMHNEATCQTLYDIIDTPISPELIPADEAGNIK--QKT 541 Query: 480 QESLPPYPILDDII-----------KRIVENEESFINNDQE---YNDETVRYVEHL---- 521 ++ + PY + D I + + +F + Q Y+D+ +++ + Sbjct: 542 EDLVGPYELHDFFIYHFLRHGFTPQRLFIMARHAFASPQQRAKHYSDDEIKHWLRVFLRR 601 Query: 522 LYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ + S Sbjct: 602 FFAQQFKRSCLPDGPKVGSVSL 623 >gi|86150226|ref|ZP_01068453.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597508|ref|ZP_01100742.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|218562438|ref|YP_002344217.1| NAD synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|25090805|sp|Q9PPB0|NADE_CAMJE RecName: Full=NH(3)-dependent NAD(+) synthetase gi|85839342|gb|EAQ56604.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190100|gb|EAQ94075.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360144|emb|CAL34938.1| NH(3)-dependent NAD(+) synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315928259|gb|EFV07575.1| NH(3)-dependent NAD(+) synthetase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929367|gb|EFV08573.1| NH(3)-dependent NAD(+) synthetase [Campylobacter jejuni subsp. jejuni 305] Length = 246 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 129/224 (57%), Gaps = 23/224 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ + V++GLSGGIDSAL A + AL KENV +++P + ++ +LEDA Sbjct: 14 IQEKVKNSQSQGVVLGLSGGIDSALVATLCKRAL-KENVFALLMPTQISNKANLEDALRL 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 L +Y ++ I +++ F Q E + +V+ N +RIR ++L S ++ Sbjct: 73 CADLNLEYKIIEIQSILDAFIK------QSENTTLVSLGNFAARIRMSLLYDYSALKNSL 126 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ TSNKSE+ +GYGT+YGD++ FNP+ LYK++++ LA + N H Sbjct: 127 VIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKSEIYALAKYLNLH-------------- 172 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + ++K+PSA+L +Q+D+ L Y +D+ +K + N+E + Sbjct: 173 ENFIKKAPSADLWENQSDEADLGFSYTKIDEGLKALETNDEKLL 216 >gi|284926056|gb|ADC28408.1| NAD synthetase [Campylobacter jejuni subsp. jejuni IA3902] Length = 246 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 129/224 (57%), Gaps = 23/224 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ + V++GLSGGIDSAL A + AL KENV +++P + ++ +LEDA Sbjct: 14 IQEKVKNSQSQGVVLGLSGGIDSALVATLCKRAL-KENVFALLMPTQISNKANLEDALRL 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 L +Y ++ I +++ F Q E + +V+ N +RIR ++L S ++ Sbjct: 73 CADLNLEYKIIEIQSILDAFIK------QSENTTLVSLGNFAARIRMSLLYDYSALKNSL 126 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ TSNKSE+ +GYGT+YGD++ FNP+ LYK++++ LA + N H Sbjct: 127 VIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKSEIYALAKYLNLH-------------- 172 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + ++K+PSA+L +Q+D+ L Y +D+ +K + N+E + Sbjct: 173 ENFIKKAPSADLWENQSDEADLGFSYTKIDEGLKALETNDEKLL 216 >gi|288800158|ref|ZP_06405617.1| glutamine-dependent NAD+ synthetase [Prevotella sp. oral taxon 299 str. F0039] gi|288333406|gb|EFC71885.1| glutamine-dependent NAD+ synthetase [Prevotella sp. oral taxon 299 str. F0039] Length = 653 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 126/509 (24%), Positives = 208/509 (40%), Gaps = 80/509 (15%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I +A P V + NI + + E+A ++ +++I F EL I+GY +DL + + I Sbjct: 7 IKVASTTPTLEVANCKYNINEILKLAEQAEKEHVEIIAFPELSITGYTCQDLFRQTALIN 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ T +VG P + + +LN V+L G I+ V K LPNY EF+ Sbjct: 67 GAEQALCYYIDQTKQFDLISIVGLPLKVGDLLLNVAVVLQKGKILGVIPKTYLPNYGEFY 126 Query: 125 EKRTFISG----------------YSNDPIVFRD---IRLGILICEDIWKNSNICKHLKK 165 EKR F S S P +FR + I ICED+W L Sbjct: 127 EKRWFASSQDLRPTEVVIADQKLLISAKPELFRTASGVLFAIEICEDVWAPIPPSNRLTL 186 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K +++ Q + IY G+ +L+F G + Sbjct: 187 SGADIIFNLSASDELIGKHNYLKSLLSQQSARTICGYIYSGSGFGESTQDLVFGGNILIY 246 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------EEADYN 277 + + +A K FS +N + D ++ + ++ +T YI Q E+ D Sbjct: 247 ENGRLIA-SGKRFSLENQLVTAQIDVEILR----NERRDNTTYINAQRSSELGIEQIDVI 301 Query: 278 AC-------------------------------------VLSLRDYVQKNNFHKVIIGLS 300 +C L L ++ N V+IG+S Sbjct: 302 SCFARDTNIFELERAIDPHPFIPTGEGRDQSLDDILNIQALGLVKRLKHINGKNVVIGIS 361 Query: 301 GGIDSALCAAIAVDALGKENVQT-----IMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L + V A K N+ + +P T+ ++ +A LG + I Sbjct: 362 GGLDSTLALLVCVLAFDKLNLDRKGIIGVTMPGFGTTDRTYNNALELMNKLGITSKEINI 421 Query: 356 -HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 ++ HF + + + EN Q+R R ILM LSN A+++ T + SE+++G Sbjct: 422 SKSVLQHFEDIQHDINNHDAT---YENSQARERTQILMDLSNKLNAIVVGTGDLSELALG 478 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 + T GD + + KT + L + Sbjct: 479 WATYNGDHMSMYGVNASVPKTLILHLVQY 507 >gi|299146343|ref|ZP_07039411.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_23] gi|298516834|gb|EFI40715.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_23] Length = 641 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 131/552 (23%), Positives = 229/552 (41%), Gaps = 71/552 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQLDIISIVGMPVGVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S SN D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNSVRLCGQIVPIGSNLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G F ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGFIYEN 245 Query: 226 QQQLA----FQMKH---FSE----------------------------QNFMTEWHYDQQ 250 LA F MK SE + TE+ ++ Sbjct: 246 GSLLAHSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSKE 305 Query: 251 LSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 L+ + I L E E ++ V L + +IG+SGG+DS L Sbjct: 306 LTLTRKFNSHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVIGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + V D LG ++++ I +P T+ ++ +A K+LG + I D + HF Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHFK 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHNINVHD---VTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRPHQT 478 + + KT V L W +G+ + L + I P ++ + E++ Q Sbjct: 483 SMYGVNASVPKTLVKYLVQWVAVNGMDENSKATLLDIVDTPISPELIPADENGEIK--QK 540 Query: 479 DQESLPPYPILD 490 ++ + PY + D Sbjct: 541 TEDLVGPYELHD 552 >gi|255523359|ref|ZP_05390329.1| NAD+ synthetase [Clostridium carboxidivorans P7] gi|296188293|ref|ZP_06856685.1| NAD+ synthetase [Clostridium carboxidivorans P7] gi|255513013|gb|EET89283.1| NAD+ synthetase [Clostridium carboxidivorans P7] gi|296047419|gb|EFG86861.1| NAD+ synthetase [Clostridium carboxidivorans P7] Length = 637 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 135/617 (21%), Positives = 245/617 (39%), Gaps = 84/617 (13%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I +A +P+ V DI N+ + A QG L++F EL I+ Y DL +++ + Sbjct: 7 IRVAAASPITNVADIKFNLKNIVNCIDNAIEQGSKLVVFPELCITSYTCADLFWQQLLLN 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + S + + I VG P + N I+ G ++ + K +PNY+EF+ Sbjct: 67 EAIDGVEHICSYSKEKDILIAVGAPLIHNNCLYNCAYIIFNGKVLGIVPKSYIPNYTEFY 126 Query: 125 EKRTFISG----------YSNDPIVF--------RDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G + + I F D + G ICED+W +L Sbjct: 127 EKRWFTEGIGIVNKKVNLFFQEEIPFGTNLIFACGDFKFGFEICEDLWVTIPPSSYLSLM 186 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R ++V Q + IY + +L+F G + Sbjct: 187 GANIIGNLSASNEIVSKADYRKDLVKAQSARCMASYIYASSGVFESTTDLVFSGDLLISE 246 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQ---WNYMSDDSASTM---------------- 265 L + E +T +L+ N DS + Sbjct: 247 NGSLLQHNNRFQRENEVITSIVDVNKLNSERLRNVSFRDSTRLIPVEPLQINFEFENLDY 306 Query: 266 -----------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P + E D +N L + K ++G+SGG+DS L Sbjct: 307 KNFDRYIDKHPFVPSNKAERDIRCKEIFNIQTSGLAKRISHTGVKKAVVGISGGLDSTLA 366 Query: 309 AAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + + + EN+ T+ +P T+ ++ +A K LG ++ + I F Sbjct: 367 LLVMIKTFRMLNIQSENIITVTMPGFGTTDRTYNNAVNLCKKLGTEFREINIVPACLQHF 426 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 +S E + EN+Q+R R ILM ++N +L+ T + SE+++G+ T GD Sbjct: 427 KDISH--DVEKHDVTYENVQARERTQILMDIANKEGGLLIGTGDLSELALGWCTYNGDHM 484 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSAELRPHQT 478 + + KT V L + + + L + P +L K + E+ Q Sbjct: 485 SMYGVNCSIPKTLVRYLVKYVAETEVPKDISDILMDILDTPVSPELLPKDKNGEI--AQK 542 Query: 479 DQESLPPYPILDDIIKRIVE-----NEESFINND---QEYNDETV-RYVEHLL---YGSE 526 ++ + PY + D + + N+ F+ + +Y++E + ++ E + + + Sbjct: 543 TEDIVGPYELHDFFLYNFIRQGAEPNKILFLAKEAFKDDYDNEIIEKWFEKFIKRFFTQQ 602 Query: 527 YKRRQAPVGTKITAKSF 543 +KR P G K+ S Sbjct: 603 FKRSAIPDGPKVGTVSL 619 >gi|313896137|ref|ZP_07829691.1| NAD+ synthase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975562|gb|EFR41023.1| NAD+ synthase [Selenomonas sp. oral taxon 137 str. F0430] Length = 554 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 34/314 (10%) Query: 202 IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS 261 ++YVN +G QD + FDG ++ +T Y++ L+ + D + Sbjct: 160 VVYVNALGVQDT---GKTVYAFDG----VCRVYRADGAPVLTSAPYEEGLT----VVDTT 208 Query: 262 ASTMYIPLQEE---EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK 318 T P +E Y ++R ++++ + +V++G+SGGIDSA+ AA+ VDA+G Sbjct: 209 QLTSLEPAVKEPPVAPIYRTLRYAVRKFLERIHMERVVVGISGGIDSAVSAALYVDAIGA 268 Query: 319 ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---- 374 + V + +P ++ S + AA A+ LGC+ ++PI + V++ + +S+ E Sbjct: 269 DRVLLVNMPSRFNSETTKGLAARLAENLGCRSMIVPIEESVSYTAAQLSKIPVEGAAAAP 328 Query: 375 ------SGIVAENIQSRIR-GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 S V EN+Q+R R G +L +++ A NK+E +VGY TLYGD++G Sbjct: 329 GEHLTISSFVRENMQARNRSGRVLSSIAAAWGAGFTCNGNKAECTVGYATLYGDLAGFLA 388 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESLPP- 485 L DL+K QV+ LA N+ E IP I++ PSAEL Q D+ P Sbjct: 389 ALADLWKYQVYDLARHLNAEVYGR------EAIPQGIIDIVPSAELSDAQNVDEGKGDPI 442 Query: 486 -YPILDDIIKRIVE 498 YP D + + E Sbjct: 443 RYPYHDYLFRAFAE 456 >gi|237733660|ref|ZP_04564141.1| NAD+ synthetase [Mollicutes bacterium D7] gi|229383258|gb|EEO33349.1| NAD+ synthetase [Coprobacillus sp. D7] Length = 644 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 140/613 (22%), Positives = 246/613 (40%), Gaps = 82/613 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + ++ N EA +++ EL ++GY EDL + + Sbjct: 16 IRVAAGSFETSIANVKNNSENICNLINEAYHNDARVLVLPELCLTGYTCEDLFNQDRLLN 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + T+ + T++ +VG P Q + N ++ G ++A+ K ++PNY EF+ Sbjct: 76 EAKQQLQTIITATNNKDLITIVGLPYQHLNSLYNVAAVIHQGALLALVPKTHIPNYQEFY 135 Query: 125 EKRTF--------ISGYSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F ++ ++ I F D + G+ ICED+W L Sbjct: 136 EARRFEQAPKENTLTNFNGQKIPFGTHYVFASTTNSDFKFGVEICEDLWLPDAPSTKLAL 195 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG----- 218 GA + + +AS K R +V+ Q + + +Y N G+ +++F G Sbjct: 196 NGANLILNPSASNEITTKSDYRRLLVSSQSARLVCGYVYCNAGNGESTTDVVFSGHHIIS 255 Query: 219 -------ASFCFDGQQQLA-FQMKHF-SEQNFMTEW--HYDQQLSQWNYMSDDSASTMYI 267 S FD + +K SE+ MT + +++ + ++ + D +T Y Sbjct: 256 ENGTMIKESRGFDSELIYGDLDLKKLSSERRKMTTFKSYHNYETIYFDSTNIDLNTTYYY 315 Query: 268 ---PLQEEEADYNA--C-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA 315 P D A C L ++ KV+IG+SGG+DS L + A Sbjct: 316 DPHPFVPSNRDLRAKRCKEVFDIQTRGLMQRLKATGIKKVVIGISGGLDSTLALLVCTMA 375 Query: 316 LGKENVQT-----IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL 370 K N T I +P T+ ++ +A + L + I + V F + Q Sbjct: 376 FKKLNYDTKDIIAITMPCFGTTSRTKNNALGLMEELAVTSIEVDITESVRIQFRDIEQ-- 433 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 E + EN+Q+R R ILM +N +++ T + SE+++G+ T GD + Sbjct: 434 DENIHDVTYENVQARTRTEILMNKANQVGGLVIGTGDLSEVALGWSTYNGDHMSMYAVNV 493 Query: 431 DLYKTQVFQLASWRNS--HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ------ES 482 + KT V L + S H G E I IL+ S EL P + DQ + Sbjct: 494 SVPKTLVRYLVDYVASLYH------GEKLETILKDILDTPVSPELLPQENDQIVQKTEDI 547 Query: 483 LPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVEHLLY----GSEYKRR 530 + PY + D I +V ++ + +Y+ ET++ Y ++KR Sbjct: 548 VGPYELHDFFIYHMVRFGDEPRKLYRKTKLAFKDKYDKETIKKWLTKFYWRFFSQQFKRS 607 Query: 531 QAPVGTKITAKSF 543 P G K+ + S Sbjct: 608 CIPDGPKVGSVSL 620 >gi|14520383|ref|NP_125858.1| NAD synthetase [Pyrococcus abyssi GE5] gi|14548122|sp|Q9V2A9|NADE_PYRAB RecName: Full=Probable NH(3)-dependent NAD(+) synthetase gi|5457598|emb|CAB49089.1| nadE NH(3)-dependent NAD+ synthetase [Pyrococcus abyssi GE5] Length = 257 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 149/264 (56%), Gaps = 24/264 (9%) Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 DY + + D++++ + V++G+SGG+DSA +A ALG+E V +++PY Q Sbjct: 5 DYEKAIERIIDFIREKCSNGVVVGISGGVDSATVTYLATKALGREKVLGLIMPY--YENQ 62 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +EDA ++LG +Y V+ I +V+ S + L ++ G N+ +R R IL A Sbjct: 63 DVEDAKLVVESLGIEYRVINIRPIVDTIVSEIGIELDKKSLG----NVMARTRMMILYAH 118 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +N M+L TSN+SE GY T +GD + + PL +LYKT+V+++A +G Sbjct: 119 ANSMNRMVLGTSNRSEFLTGYFTKWGDGASDYAPLINLYKTEVWEIA---------KRIG 169 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE--NEESFINNDQEYN 511 +P I++K P+A L QTD++ L Y +LD+I+ R+V+ E+ I D Sbjct: 170 -----VPERIVKKKPTAGLWEGQTDEDELGISYKLLDEILWRLVDLKMEKEKIAEDLGIP 224 Query: 512 DETVRYVEHLLYGSEYKRRQAPVG 535 E V +VE+L+ GSE+KRR P+G Sbjct: 225 IEKVEHVENLVKGSEHKRR-LPIG 247 >gi|283957207|ref|ZP_06374669.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283791279|gb|EFC30086.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 236 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 129/224 (57%), Gaps = 23/224 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ + V++GLSGGIDSAL A + AL KENV +++P + ++ +LEDA Sbjct: 14 IQEKVKNSQSQGVVLGLSGGIDSALVATLCKRAL-KENVFALLMPTQISNKANLEDALRL 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 L +Y ++ I +++ F Q E + +V+ N +RIR ++L S ++ Sbjct: 73 CVDLNLEYKIIEIQSILDAFIK------QSENTTLVSLGNFAARIRMSLLYDYSALKNSL 126 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ TSNKSE+ +GYGT+YGD++ FNP+ LYK++++ LA + N H Sbjct: 127 VVGTSNKSELLLGYGTIYGDLACAFNPIGSLYKSEIYALAKYLNLH-------------- 172 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + ++K+PSA+L +Q+D+ L Y +D+ +K + N+E + Sbjct: 173 ENFIKKAPSADLWENQSDEADLGFSYAKIDEGLKALETNDEKLL 216 >gi|91773753|ref|YP_566445.1| NAD synthetase [Methanococcoides burtonii DSM 6242] gi|121686679|sp|Q12V31|NADE_METBU RecName: Full=NH(3)-dependent NAD(+) synthetase gi|91712768|gb|ABE52695.1| NH3-dependent NAD+ synthetase [Methanococcoides burtonii DSM 6242] Length = 263 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 121/215 (56%), Gaps = 17/215 (7%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 ++ ++G+SGGIDSAL A ++V+ALG ENV I +P T +EDA+ A+AL Sbjct: 18 LEGTGIEGAVVGISGGIDSALVAYLSVEALGAENVLGIHMPEASTPKSEIEDASKVAEAL 77 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G + V+ I +++ + + M + S V N+++RIR ++L +N +++ T Sbjct: 78 GIDFKVINITNVLEVYRTAMPDI--DGASAHVDGNLKARIRMSMLYYYANMFGRVVMGTG 135 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSEI +GY T YGD P+ DLYKT+V +++ LG +P SILE Sbjct: 136 NKSEILLGYFTKYGDGGVDIEPIGDLYKTEVREMSKM---------LG-----VPESILE 181 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE 500 K+PSA L QTD++ L Y +D +++ I+ E Sbjct: 182 KAPSAGLWEGQTDEDDLGVTYETIDKVLQPILAGE 216 >gi|300853880|ref|YP_003778864.1| glutamine-dependent NAD(+) synthetase [Clostridium ljungdahlii DSM 13528] gi|300433995|gb|ADK13762.1| glutamine-dependent NAD(+) synthetase [Clostridium ljungdahlii DSM 13528] Length = 637 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 137/610 (22%), Positives = 237/610 (38%), Gaps = 88/610 (14%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V DI N+ + + A + L++F EL I+ Y DL ++ ++ A+ L Sbjct: 18 VADIEFNLNNIKLCIDRALEEKSKLVVFPELCITSYTCADLFEQQLLLEKSVEALKKLCD 77 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--- 132 + D I VG P + N I+ G+I+ + K +PNY EF+EKR F G Sbjct: 78 YSKDIDILIAVGAPLTYNCCLYNCAYIIFQGSILGIVPKSYIPNYEEFYEKRWFTEGLKV 137 Query: 133 -------YSNDPIVFR--------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y + I F + + GI ICED+W +L GA + +L+AS Sbjct: 138 TDEKVNFYFQEDIPFGTNLIFTCGNFKFGIEICEDLWTVVPPSSYLCLMGANIIGNLSAS 197 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIY--VNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 +K R +++ Q + IY +L+F G C + + Sbjct: 198 NEVVSKSTYRRSLISSQSARCMCSYIYSSCGVFESSTDLVFSG-DMCISENGAILESGER 256 Query: 236 FSEQNFMTEWHYDQ-----------------------------QLSQWNYMSDDSASTM- 265 F +N + D Q NY D Sbjct: 257 FKRENQIITTIVDLGRLAAQRLRNVSFRDSVKLFLEKPIEVKFQFETMNYGKFDRTVDKH 316 Query: 266 -YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA--- 315 ++P ++E + +N +L V N + +IG+SGG+DS L + V Sbjct: 317 PFVPSGKDEREIRCREIFNIQTSALAKRVSHTNLKRAVIGISGGLDSTLALLVTVKTFDM 376 Query: 316 --LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 + ++N+ T+ +P T+ ++ +A K+LG + + I D F +S E Sbjct: 377 LKISRDNIITVTMPGFGTTDRTYNNAVDLCKSLGTELREINIVDACLQHFKDISH--DRE 434 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + EN+Q+R R I+M ++N +++ T + SE+++G+ T GD ++ + Sbjct: 435 IHDVTYENVQARERTQIIMDIANKEGGLVIGTGDLSELALGWCTYNGDHMSMYSVNCSIP 494 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QTDQESLPPY 486 KT V L + ++ + I IL+ S EL P Q ++ + PY Sbjct: 495 KTLVRYLVRYVADKEVSKNISD----ILIDILDTPVSPELLPKDKNGKIAQKTEDIVGPY 550 Query: 487 PILDDIIKRIVENEES-----FINNDQEYNDET-------VRYVEHLLYGSEYKRRQAPV 534 + D + V + S F+ ND T ++ + ++KR P Sbjct: 551 ELHDFFLYYFVRHSYSPEKILFLAKQAFKNDYTNDVICKWLKVFTKRFFTQQFKRSAIPD 610 Query: 535 GTKITAKSFG 544 G K+ S Sbjct: 611 GPKVGTVSLS 620 >gi|160881550|ref|YP_001560518.1| NAD+ synthetase [Clostridium phytofermentans ISDg] gi|160430216|gb|ABX43779.1| NAD+ synthetase [Clostridium phytofermentans ISDg] Length = 647 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 129/557 (23%), Positives = 232/557 (41%), Gaps = 78/557 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A N V D N+ + EEA ++G +I+ EL I+GY EDL + + + Sbjct: 6 VKVAAITPNIKVADCEYNVNEIIHQIEEAKQKGAKVIVCPELCITGYTCEDLFLQNTLLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ L + D A I VG P + N V+L G ++ + K N+PNYSEF+ Sbjct: 66 GALDGLNKLIDYSKDIDALIAVGLPFLKDGKLFNVAVVLYQGELLGMVPKRNIPNYSEFY 125 Query: 125 EKRTFISGY----------------SNDPIVFRDI---RLGILICEDIWKNSNICKHLKK 165 E R F +G SN R+I ++GI ICED+W L + Sbjct: 126 EARYFGNGNDIVEHVTINHKKVPFGSNLIFCHREIPYLKVGIEICEDLWVPQPPSGGLCQ 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R +V+ Q + + +Y + G+ +L+F G + Sbjct: 186 AGATVILNLSASNETTGKDIYRKTLVSNQSARLVCGYLYSSAGEGESTTDLVFSGHNMIA 245 Query: 224 DGQQQLAFQMKHFS-------------------------EQNFMTEWHYDQQLSQWNYMS 258 + +A + + E+ T Y + ++ N Sbjct: 246 ENGTVIAESERFVNGVIVSEVDLEKIISERRRISTYLVEEKKDYTYLEYGEYATENNSNY 305 Query: 259 DDSAS-------TMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGID 304 D + S + ++P ++EE + C L L+ +Q V++G+SGG+D Sbjct: 306 DTTLSLTRFIDKSPFVPTKKEERE-KRCDEIIHMQALGLKKRLQHTGSKSVVLGISGGLD 364 Query: 305 SALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S L + A L + + + +P T+ ++ ++A + L + I++ V Sbjct: 365 STLALLVTRRAFDMLELDPKGIVAVTMPCFGTTDRTYQNAILLVQELSATLREIRINEAV 424 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + + + + EN Q+R R +LM ++N ++ T + SE+++G+ T Sbjct: 425 ELHFRDIGHDINKH--DVTFENGQARERTQVLMDIANQVNGFVVGTGDMSELALGWATYN 482 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH--- 476 GD + + KT V L S+ + L + + +L+ S EL P Sbjct: 483 GDHMSMYGVNSSVPKTLVRYLVSYFAEEAKSDTLRNVLK----DVLDTPVSPELLPPKDG 538 Query: 477 ---QTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 539 EIVQKTEDVVGPYELHD 555 >gi|325957778|ref|YP_004289244.1| NH(3)-dependent NAD(+) synthetase [Methanobacterium sp. AL-21] gi|325329210|gb|ADZ08272.1| NH(3)-dependent NAD(+) synthetase [Methanobacterium sp. AL-21] Length = 277 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 150/276 (54%), Gaps = 22/276 (7%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 IP+ + E ++D V ++ V+IGLSGGIDSA A + AL KE + I++ Sbjct: 8 IPMDDGEKTIKQLSEFIKDKVSQSRSAGVVIGLSGGIDSATTAYLCARALEKEQILGIIM 67 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL----MSQFLQEEPSGIVAE-N 381 P + TS + ++DA A+ LG +Y+++ + DL++ F L +S L+ PS +A N Sbjct: 68 PTETTSYEDIDDAVTVAEELGIEYEIIAVDDLISPFNELCMHSVSNKLKNTPSRSLANAN 127 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++RIR IL +N M++ T N++E+ +GY T YGD P+ +LYKT+V +A Sbjct: 128 LKARIRMMILYYHANDLGRMVVGTGNRTELLIGYFTKYGDGGVDILPIGNLYKTEVRSIA 187 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN- 499 LG +P +I++K+P+A L QTD+E L Y LD ++ +V+ Sbjct: 188 QI---------LG-----VPENIIKKAPTAGLWHGQTDEEELGIKYETLDKLLFLMVDKG 233 Query: 500 -EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 ++ I + + + E V +++ + S++K AP Sbjct: 234 LDDQKIAENLDISVEEVLRIKNKVQSSKHKLEPAPT 269 >gi|315499307|ref|YP_004088111.1| nad+ synthetase [Asticcacaulis excentricus CB 48] gi|315417319|gb|ADU13960.1| NAD+ synthetase [Asticcacaulis excentricus CB 48] Length = 679 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 125/524 (23%), Positives = 211/524 (40%), Gaps = 80/524 (15%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 +++F EL ++GY +DL + + + A ++++ L + +V G P + + + N Sbjct: 52 VVVFPELSLTGYTLDDLFLQDALLDAAKASLEALVQASKAWRTIVVCGVPLRIEGVLYNC 111 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV-------------------F 140 +L G I+ + K LPNY EF+EKR F SG + + F Sbjct: 112 AAVLHHGQILGLVPKTFLPNYREFYEKRWFGSGQDLNTQLEIAGQSVRVTPHQIFQARGF 171 Query: 141 RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL 200 LG+ ICED+W +L +GA + +L+ASP K + R I + Sbjct: 172 ESFALGVEICEDMWSPQTPSTNLALKGATLVVNLSASPVTVGKSRVRKRICEATSERLMC 231 Query: 201 PIIYVNQVGGQD--ELIFDGASFCFD-GQ-----------------------QQLAFQMK 234 + G+ +L +DG S ++ G+ QQ + Sbjct: 232 AYAFTASGPGESTTDLAWDGQSLIYELGELLAEGERFLSDTLTIADVDVERIQQERLRTG 291 Query: 235 HFSEQNFMTEW---------HYDQQLSQWNYMSDDSASTMYIPLQEEEAD------YNAC 279 F + +T H LS + + D Y+P E D +N Sbjct: 292 TFRDAGHITSGAEVSRHLFTHLPHTLSDFYRLVDRFP---YVPNARERLDEDCFEAFNIQ 348 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQ 334 V L ++ V+IG+SGG+DS + A A D LG + ++ +P T+ Sbjct: 349 VHGLMRRIESTGAKSVVIGVSGGLDSTHALIVACKAFDRLGLPRAQIRGYTMPGFGTTSG 408 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFF-SLMSQFLQEEPS-GIVAENIQSRIRGNILM 392 S DA +ALG + + I + + + EP +V EN+Q+ +R + L Sbjct: 409 SKSDAHKLMRALGVSAEEIDIRPASKRMLIDIGHPYGKGEPVYDVVFENVQAGLRTDFLF 468 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 L+ ++ T + SE+++G+ T GD +N KT + L W + Sbjct: 469 RLAGQHNGFVVGTGDLSELALGWCTYGVGDHMSHYNVNCGAPKTLIQHLIRWAARTEFDA 528 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQ-----ESLPPYPILD 490 G + S+LE+ S EL P Q Q + + PYP+ D Sbjct: 529 KAGRVLR----SVLEREISPELVPVQNGQAQRTEDKVGPYPLQD 568 >gi|331697568|ref|YP_004333807.1| NAD(+) synthase [Pseudonocardia dioxanivorans CB1190] gi|326952257|gb|AEA25954.1| NAD(+) synthase (glutamine-hydrolyzing) [Pseudonocardia dioxanivorans CB1190] Length = 680 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 129/562 (22%), Positives = 225/562 (40%), Gaps = 80/562 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A L V+ D A N A + G+ + LF EL +SGY ED++ + + + Sbjct: 12 LRVAACTLRTVIADPAANAASVLETARALHDDGVGMALFPELTLSGYSIEDVLLQDTLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + + D +VVG P + + + N V++ G ++ V K LP Y EF+ Sbjct: 72 AVERALADIVAGSADLLPVLVVGAPLRYRHRIHNCAVVIHRGRVLGVAPKSYLPTYREFY 131 Query: 125 EKRTFISG---YSNDPIVFRDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G + D+ G + ICED+W Sbjct: 132 ERRQVAPGDDIAGTLRLAGADVPFGPDLLFAAADVPGFVLHVEICEDMWVPVPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + R + S +Y G+ +L +DG + F Sbjct: 192 AGATVLANLSGSPITVGRADDRALLCRSASSRCLAAYVYAAAGEGESSTDLAWDGQTMIF 251 Query: 224 ---------------------------------------DGQQQLAFQMKHFSEQNFMTE 244 D ++ A ++ F F E Sbjct: 252 ENGVLLAESPRFPRGPRQAVADVDLDLLRAERLRMGTFDDNRRHHAARLDSFRRIEFRLE 311 Query: 245 -----WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 +++ ++ ++ D A Q+ YN V L ++ KV+IG+ Sbjct: 312 PPGHDIGLRREVERFPFVPADPARLE----QDCYEAYNIQVSGLEQRLRAIGQPKVVIGV 367 Query: 300 SGGIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS +A A+ +E ++ LP T ++ +A A+ALG ++ + Sbjct: 368 SGGLDSTHALIVAARAMDREDRPRSDILAFTLPGFATGERTKNNATRLAEALGVTFETID 427 Query: 355 IHDLVNHFF-SLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I + +L F EP + EN+Q+ +R + L +N ++L T + SE++ Sbjct: 428 ITETARLMLRNLAHPFSSGEPVYDVTFENVQAGLRTDYLFRAANQRNGIVLGTGDLSELA 487 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGP-LTEVIPPSIL-EKS 468 +G+ T GD +N + KT + L W +S +G LT+V+ I E Sbjct: 488 LGWSTYGVGDQMSHYNVNGGVPKTLIQHLIRWVVSSKQFDDEVGAVLTDVLDTEITPELV 547 Query: 469 PSAELRPHQTDQESLPPYPILD 490 P + RP Q+ + ++ PY + D Sbjct: 548 PVDDERPVQSSEATVGPYSLQD 569 >gi|73669809|ref|YP_305824.1| NAD synthetase [Methanosarcina barkeri str. Fusaro] gi|72396971|gb|AAZ71244.1| NH(3)-dependent NAD(+) synthetase [Methanosarcina barkeri str. Fusaro] Length = 265 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 142/265 (53%), Gaps = 19/265 (7%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 E N + +R+ +K + ++G+SGGIDSAL A + V ALGK+ V I +P + Sbjct: 14 EIAQNRIIDFIRNETRKAGVNGAVVGISGGIDSALAATLTVKALGKDKVLGIHMPESGLT 73 Query: 333 P-QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 P + +DA A LG ++ + I +++ F + + + E + N+++RIR ++L Sbjct: 74 PSEDSKDAKTLADWLGIEFQTIDISGIISAFVASVPE--SESTDRLSMGNLKARIRMSLL 131 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +N M++ T NK+EI +GY T YGD P+ LYKT+V++L + Sbjct: 132 YFHANRMNRMVIGTGNKTEILLGYFTKYGDGGVDLEPIGRLYKTEVWEL---------SR 182 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES-FINNDQE 509 LG +P +++ K PSA L QTD+ L Y +D+++K++ +NE+S I N Sbjct: 183 RLG-----VPDALITKKPSAGLWAGQTDEAELGISYLKVDEVLKKLEQNEDSETILNTLG 237 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPV 534 + E ++ V + + SE+KR PV Sbjct: 238 ISAEQLKSVMNRIEKSEHKRNAPPV 262 >gi|313905929|ref|ZP_07839285.1| NAD+ synthetase [Eubacterium cellulosolvens 6] gi|313469270|gb|EFR64616.1| NAD+ synthetase [Eubacterium cellulosolvens 6] Length = 638 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 126/549 (22%), Positives = 224/549 (40%), Gaps = 68/549 (12%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V D+ N + R +EA + + + +F EL I+GY +DL + + + + + Sbjct: 17 VADVRFNCEEICRYMDEAAERKIRVSVFPELCITGYTCQDLFLQDELVDKAREGLLYIAA 76 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 T + VG P + N + G I+ + K LPNY+EF+E R F +G Sbjct: 77 HTKELDGLFFVGLPLAIDGKLYNVAAAISRGRILGIVPKTFLPNYNEFYEARHFFTGKEL 136 Query: 136 DPIVFRD-------------------IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 D + D +R+G ICED+W HL GA + +L+A Sbjct: 137 DTEIDLDGSSVPVSPKLVFCCREMPSLRIGAEICEDLWVPEPPSTHLALSGATMIVNLSA 196 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF-----------CF 223 S K + R +V+GQ + + IY + + +L+F G + C Sbjct: 197 SNEVTGKKEYRRSLVSGQSARLVCAYIYASAGATESTQDLVFSGHNILVENGSLLNESCL 256 Query: 224 --DGQQQLAFQMKHFSE-----QNFMTEWHYDQQLSQWNYMSDDSASTMYI---PLQEEE 273 +G +F +K + TE +D + ++ + YI P + Sbjct: 257 YTEGITSASFDLKRIEADRRRMTTYGTEPVHDSRKIPFSLPVAQTELNRYIDPRPFVPSD 316 Query: 274 ADYNAC---------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV---DALG--KE 319 + A + L+ + +IG+SGG+DS L + V D LG ++ Sbjct: 317 PEKRAARCEEILMIQAMGLKKRLAHIGCASAVIGISGGLDSTLALLVTVRAFDLLGFDRK 376 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + + +P T+ ++ E+A K++G + + I V+ F+ + Q E + Sbjct: 377 GILAVTMPGFGTTDRTYENALQLIKSVGAEKKEISIAKAVHVHFADIGQ--DPEVHDVTY 434 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 EN Q+R R +LM L+N + +++ T + SE+++G+ T GD + + KT V Sbjct: 435 ENSQARERTQLLMDLANKTGGIVIGTGDLSELALGWATYNGDHMSMYAVNASVPKTLVRY 494 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLPPYPILDDII 493 L + S P + IL+ S EL P Q ++ PY + D + Sbjct: 495 LVQYFAD----SNEDPALRKVLYDILDTPVSPELLPPEKGEISQKTEDLAGPYELHDFFL 550 Query: 494 KRIVENEES 502 ++ + S Sbjct: 551 YHVLRCQSS 559 >gi|291531233|emb|CBK96818.1| NAD+ synthetase [Eubacterium siraeum 70/3] Length = 648 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 142/622 (22%), Positives = 258/622 (41%), Gaps = 97/622 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + +E ++ + L +F EL I+GY +DL ++ + + Sbjct: 6 IKVAAATPEIKVADCKYNAKQIISLAKELAKKDVKLAVFPELCITGYTCQDLFYQTTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + + VVG P Q N + G ++ K LPNY+EF+ Sbjct: 66 GAKNALITILDELSELDMITVVGLPMQYDSKQYNCAAVTYHGKVLGYVPKQYLPNYNEFY 125 Query: 125 EKRTF--------------------------ISGYSNDPIVF-----RDIRLGILICEDI 153 E R F +S Y ++F D GI +CED+ Sbjct: 126 EMRHFTAWDGSKCEYFFNRFDTDADGECDDSLSAYFGAGLIFCCNNMHDFSFGIELCEDL 185 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD- 212 W +L ++GA + +L+AS K + R +V Q + + IY + G+ Sbjct: 186 WSPCPPSTYLAQEGANIILNLSASNEMIGKSEYRRSLVLNQSARLISGYIYCSAGEGEST 245 Query: 213 -ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE--------------------------W 245 +L+F G + + LA + + FS ++E W Sbjct: 246 QDLVFSGHNIIAENGATLA-ESELFSNDYVISEIDVNKLAFERRKNTSFRNDKCDTETIW 304 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA-CVLSLRDYVQKNNF-----HKVIIGL 299 +D L+ ++ + T +IP +E D +LS++ + K +IG+ Sbjct: 305 -FDIPLTD-TKITRFVSRTPFIPYSADETDKRCELILSMQAHGLKKRLAHTYAKTAVIGI 362 Query: 300 SGGIDSALCAAIAVDA---LGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + +A LG+ ++ + +P T+ ++ +A +A+G + Sbjct: 363 SGGLDSTLALLVCANAMKLLGRPMTDIVAVTMPCFGTTKRTKSNAVKICEAIGVTLREID 422 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I D V F + + + +V EN Q+R R +LM ++N + +++ T + SE+++G Sbjct: 423 ITDSVKQHFLDIGHDIND--LSVVFENGQARERTKVLMNIANQTGGLVIGTGDLSELALG 480 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT + L S+ + T+ L E + IL+ S EL Sbjct: 481 WATYNGDHMSMYGVNCSIPKTLIKHLVSY---YSKTTDNKLLKESL-EDILDTPVSPELL 536 Query: 475 P------HQTDQESLPPYPILD----DIIKRIVENEESF----INNDQEYNDETV----R 516 P Q ++ + PY + D + I+ E+ F D Y+ ET+ + Sbjct: 537 PAHNGEISQKTEDLVGPYELHDFFLYNGIRWGFTPEKVFRLALYAFDGAYDRETILKWLK 596 Query: 517 YVEHLLYGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 597 TFYRRFFSQQFKRSCLPDGPKV 618 >gi|170692828|ref|ZP_02883990.1| NAD synthase [Burkholderia graminis C4D1M] gi|170142484|gb|EDT10650.1| NAD synthase [Burkholderia graminis C4D1M] Length = 682 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 140/569 (24%), Positives = 235/569 (41%), Gaps = 93/569 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A V D N + R EA ++ L++F EL IS Y +DL +++ + A Sbjct: 15 RVAVAVPVCRVADPQFNAQETLRLAREAAQKCALLVVFPELGISAYTCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +AI + + + + A +V+G P + + + N +++ G + V K LPNY EF+E Sbjct: 75 CEAAIGDIVAASTNIPAVLVIGAPLKIEHKLFNCALVISNGKLCGVVPKSYLPNYGEFYE 134 Query: 126 KRTFISGYSNDPI--------------VFRDI------RLGILICEDIWKNSNICKHLKK 165 R F + + + D+ R I ICED+W Sbjct: 135 ARQFSAAENASSTEVMLCGQQAPFSASLLFDVPGAPLFRFHIEICEDVWVPVPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V Q + +Y + G+ +L +DG + + Sbjct: 195 AGATVLVNLSASNIVIGKSGYRHQLVGQQSARCLSAYLYSSAGRGESTTDLAWDGQALIY 254 Query: 224 DGQQQLAFQMKHFSEQNFM----------------------TEWHYD-----QQLSQWNY 256 + + LA + + + T H D Q +S Sbjct: 255 ENGELLAESERFLDTSHIIFGDVDLERLSRERMRQTTFGQSTRRHADEVRKFQVVSVPAS 314 Query: 257 MSDDSASTM--------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGG 302 + D + Y+P D YN V L + N KV+IG+SGG Sbjct: 315 LPDAEHLPLMRAINRFPYVPSNPATRDERCAEVYNIQVQGLLQRLGAANISKVVIGVSGG 374 Query: 303 IDSA---LCAAIAVD--ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLP 354 +DS L A A+D L + ++ +P TS ++L+ A +A+GC + D+ P Sbjct: 375 LDSTQALLVCAKAMDRLKLPRSHILGYTMPGFATSSRTLQQAKDLMQAVGCSMQEIDIRP 434 Query: 355 -----IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + DL NH F+ EE + EN+Q+ R + L L+N A+++ T + S Sbjct: 435 SCMQMLKDL-NHPFA-----TGEEQYDVTFENVQAGERTSHLFRLANFHHAIVIGTGDLS 488 Query: 410 EISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E+++G+ T GD ++ + KT + L W G +G + IL Sbjct: 489 ELALGWCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESG---QVGDAGSRVLEQILATE 545 Query: 469 PSAELRP-------HQTDQESLPPYPILD 490 S EL P Q + ++ PY + D Sbjct: 546 ISPELVPGKVEKVIDQKTESTIGPYELQD 574 >gi|227496377|ref|ZP_03926667.1| NAD(+) synthase (glutamine-hydrolyzing) [Actinomyces urogenitalis DSM 15434] gi|226834104|gb|EEH66487.1| NAD(+) synthase (glutamine-hydrolyzing) [Actinomyces urogenitalis DSM 15434] Length = 734 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 151/661 (22%), Positives = 257/661 (38%), Gaps = 145/661 (21%) Query: 19 IAGNIAKARRAREEA---NRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 +A A AR E+A + +G+ L+ F EL ++GY +DL A AI+ +++ Sbjct: 48 LADPAANARAMIEQARALDGEGVCLVAFPELSLTGYSVDDLFLSDVLATAVLEAIEQIRA 107 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY-- 133 + + +V+G P + + N V++ G ++ + K LP Y EF+E R F G Sbjct: 108 ASAELLPALVIGAPLRVGTRLYNCAVVIQGGRVLGIAPKSYLPTYREFYEGRYFACGTEI 167 Query: 134 ----------------SNDP-----------------------IVFR-----DIRLGILI 149 S+ P ++F + + + Sbjct: 168 GVEHLTLPGVRDDAAPSSAPQPASAGAAQQAAGRGACVPFGADLLFEVPDVPGLTFHVEV 227 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 CED+W GA L +++ SP + + R E++ S +L YV Sbjct: 228 CEDMWVPVPPSSLAALAGACVLVNISGSPITVGRAEDR-ELLARASSARNL-AAYVYAAA 285 Query: 210 GQDE----LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNY--- 256 GQ E L +DG +F ++ Q L + F + T D ++L Q + Sbjct: 286 GQGESSTDLAWDGQTFVYECGQLLG-STERFPDGPRATVVDVDIESLAAERLRQGTFDDN 344 Query: 257 ----MSDDSASTMYIP-LQEEEAD---------------------------YNACVLSLR 284 ++D S + +P L+ D YN V +L Sbjct: 345 RAALLTDASFRRIPVPGLRAPRTDIGLRRAVDRFPFVPDDPARLAQDCYEAYNIQVAALV 404 Query: 285 DYVQKNNFHKVIIGLSGGIDSA---LCAAIAVD--ALGKENVQTIMLPYKYTSPQSLEDA 339 +Q ++IG+SGG+DS + AA AVD LG+E++ I +P TS + +A Sbjct: 405 QRMQAIGLPTIVIGVSGGLDSTHALIVAARAVDRLGLGREHIHAITMPGFATSEHTKSNA 464 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG-----IVAENIQSRIRGNILMAL 394 A A+ALGC + L I + M G + EN+Q+ +R + L + Sbjct: 465 LALARALGCHVEELDIRPAATQMLTEMGHPYGRGERGREVYDVTFENVQAGLRTDFLFRI 524 Query: 395 SNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG- 452 + ++L T + SE+++G+ T GD +N + KT + L W S + S Sbjct: 525 AGQRGGIVLGTGDLSELALGWCTFGVGDQMSHYNVNAGIPKTLIQHLIRWVVSEKLFSDD 584 Query: 453 -----LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVEN-------- 499 L L I P ++ P+A+ P Q+ Q + PY + D + ++ Sbjct: 585 AGRVLLSILDTEISPELV---PAADGEPIQSTQAKIGPYALQDFTLWHVLRRGARPSKIA 641 Query: 500 ---------------EESFINNDQ-EYNDETVRYVEHL----LYGSEYKRRQAPVGTKIT 539 E D+ Y+ T+R E L + +++KR P G K+ Sbjct: 642 FLAEKAWADASTGLWPEGLPEEDRVSYDLATIRRWELLFLRRFFANQFKRSTLPNGPKVV 701 Query: 540 A 540 A Sbjct: 702 A 702 >gi|300710242|ref|YP_003736056.1| NAD synthetase [Halalkalicoccus jeotgali B3] gi|299123925|gb|ADJ14264.1| NAD synthetase [Halalkalicoccus jeotgali B3] Length = 262 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/254 (33%), Positives = 132/254 (51%), Gaps = 20/254 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 + D V ++GLSGGIDS L A +AV+ALGKEN++ ++LP + +S ++ DA Sbjct: 22 IADTVANAGADGAVLGLSGGIDSTLTAYLAVEALGKENLRGLVLPGEVSSEANMSDAERV 81 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ L +YDV+ I+ +V F S + + E + N ++R+R + L+NH ++ Sbjct: 82 ARDLEIEYDVIEINPIVESFVSAVPEV---EGDQVAVGNSRARVRAVLNYLLANHENRIV 138 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T N++E +VGY T YGD + P+ +LYK QV QLA H + + Sbjct: 139 LGTGNRAEAAVGYYTKYGDGAVDCLPIGNLYKQQVRQLA-----HHVG---------VAE 184 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY--NDETVRYVE 519 + EK+P+AEL QTD+ L Y LD ++ ++ S + ++ VR V Sbjct: 185 DLAEKTPTAELWEDQTDEGELGIDYDTLDAVLALHIDGPLSVSATSEAVGCGEDVVRDVR 244 Query: 520 HLLYGSEYKRRQAP 533 L S +KR P Sbjct: 245 ALYERSAHKRAMPP 258 >gi|21226548|ref|NP_632470.1| NAD synthetase [Methanosarcina mazei Go1] gi|25090751|sp|Q8PZP6|NADE_METMA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|20904820|gb|AAM30142.1| NAD(+) synthetase [Methanosarcina mazei Go1] Length = 256 Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 135/261 (51%), Gaps = 19/261 (7%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ-S 335 N + +RD + V++G+SGGIDSAL A +AV ALGK+ V I +P +P Sbjct: 8 NRIIDFIRDETGRAGVKGVVVGISGGIDSALTATLAVKALGKDRVLGIHMPESSLTPAVD 67 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 EDA A A LG +Y + I +++ F + + + E + N+++R R ++L + Sbjct: 68 SEDAEALADWLGIEYRTIDISGIISAFMAAVPE--SESADRLTKGNLKARTRMSLLYFHA 125 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N M++ T NK+EI +GY T YGD P+ LYKT V++L +S LG Sbjct: 126 NRLNRMVIGTGNKTEILLGYYTKYGDGGVDLEPIGGLYKTGVWEL---------SSRLG- 175 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN-EESFINNDQEYNDE 513 IP S++ K PSA L QTD+ L Y +D+++K I + E I + + + Sbjct: 176 ----IPESLITKKPSAGLWAGQTDEADLGISYVKVDEVLKMIEDGVEPEVILDKTGISAD 231 Query: 514 TVRYVEHLLYGSEYKRRQAPV 534 + V + +E+KR+ PV Sbjct: 232 QLNSVTRRIERNEHKRKAPPV 252 >gi|319956656|ref|YP_004167919.1| nh(3)-dependent nad(+) synthetase [Nitratifractor salsuginis DSM 16511] gi|319419060|gb|ADV46170.1| NH(3)-dependent NAD(+) synthetase [Nitratifractor salsuginis DSM 16511] Length = 633 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 141/615 (22%), Positives = 257/615 (41%), Gaps = 85/615 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ A+ +L+ +G+ A N+ + R +A+ + + ++F EL ++GY DL F++ Sbjct: 6 RIGAAVPKLH--LGNPARNVREILRLYRQASNERITAVVFPELCLTGYTLADLFFQERLY 63 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +A + A++ L + D VG + + + N ++ G I+ + K +P+ EF Sbjct: 64 RAQNEALEWLLEQSRDFDTLAAVGMMLRVDDRLYNVAAVIQRGEILGIIPKSYIPDKREF 123 Query: 124 HEKRTFISG----------------YSNDPIVFRD---IRLGILICEDIWKNSNICKHLK 164 +EKR F SG + D ++FRD R+G+ ICED+W + L Sbjct: 124 YEKRQFDSGREIVGETVTLFGREVPFGVD-LIFRDEGEFRMGVEICEDLWALTPPSNLLA 182 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIY---------VNQVGGQDELI 215 GA + +L+AS K R E+V Q + + Y + V G D +I Sbjct: 183 ASGANLILNLSASNELAGKADYRAELVRTQSARLVCVYAYASSGPGESSTDTVFGGDSMI 242 Query: 216 FD-------GASFCFDGQQQLA-FQMKHFSEQNFMTEWHYD---QQLSQWNYMSDDSAST 264 + G F F+ Q A ++ + + D +++ + N Sbjct: 243 AEYGSLLARGERFRFESQLIAADVDLRKLTGLREAETGYCDAPRRKMRRINVAPLPRPDA 302 Query: 265 MYIPLQ----------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + P+ EE + A L R +++ + ++G+SGG+DS L Sbjct: 303 LRRPIDPHPFVPGNPADRNRRCEEISAIQAHALIRR--MKQARIRRAVLGISGGLDSTLA 360 Query: 309 -----AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 A + + + +P T+ ++ +A + LG + +PI L F Sbjct: 361 LLATWKAFQIMERDPSEILAVTMPGFGTTGRTYANAVKLCQTLGVELREVPIQKLALAEF 420 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + E + EN+Q+R R ILM L+N +++ T + SEI++G+ T GD Sbjct: 421 EAIGH--DPETHDVTYENVQARARTEILMNLANKEHGLVVGTGDLSEIALGFSTYNGDHM 478 Query: 424 GGFNPLKDLYKTQVFQLASW--RNSHGITSGLGP-LTEVIPPSILEKSPSAELRPHQTDQ 480 + + KT V L + R ++ LG L+ + P +L P+ E + Q + Sbjct: 479 SMYALNSGIPKTLVRYLVEYYARIHPELSDVLGDILSTPVSPELL---PAEEGQIAQKTE 535 Query: 481 ESLPPYPILD----DIIKRIVENEE----SFINNDQEYNDETVRYVEHL----LYGSEYK 528 E + PY + D IK E + + + D Y++ T+R L + ++K Sbjct: 536 EIVGPYELHDFFLYHFIKYGAEPAKILYLATLAFDGRYDEATIRKWLRLFLRRFFTQQFK 595 Query: 529 RRQAPVGTKITAKSF 543 R P G K+ S Sbjct: 596 RSCMPDGPKVGTISL 610 >gi|310689987|pdb|3P52|A Chain A, Nh3-Dependent Nad Synthetase From Campylobacter Jejuni Subsp. Jejuni Nctc 11168 In Complex With The Nitrate Ion gi|310689988|pdb|3P52|B Chain B, Nh3-Dependent Nad Synthetase From Campylobacter Jejuni Subsp. Jejuni Nctc 11168 In Complex With The Nitrate Ion Length = 249 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 128/224 (57%), Gaps = 23/224 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ + V++GLSGGIDSAL A + AL KENV ++ P + ++ +LEDA Sbjct: 17 IQEKVKNSQSQGVVLGLSGGIDSALVATLCKRAL-KENVFALLXPTQISNKANLEDALRL 75 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 L +Y ++ I +++ F Q E + +V+ N +RIR ++L S ++ Sbjct: 76 CADLNLEYKIIEIQSILDAFIK------QSENTTLVSLGNFAARIRXSLLYDYSALKNSL 129 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ TSNKSE+ +GYGT+YGD++ FNP+ LYK++++ LA + N H Sbjct: 130 VIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKSEIYALAKYLNLH-------------- 175 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + ++K+PSA+L +Q+D+ L Y +D+ +K + N+E + Sbjct: 176 ENFIKKAPSADLWENQSDEADLGFSYTKIDEGLKALETNDEKLL 219 >gi|125972846|ref|YP_001036756.1| NAD synthetase [Clostridium thermocellum ATCC 27405] gi|125713071|gb|ABN51563.1| NH(3)-dependent NAD(+) synthetase [Clostridium thermocellum ATCC 27405] Length = 645 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 142/626 (22%), Positives = 261/626 (41%), Gaps = 106/626 (16%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +LK+ + N I G I K +A G+ +++F EL I+GY DL +++ + Sbjct: 14 RLKVGGCRYNS--DQIIGLIGKGEKA-------GIQILVFPELSITGYTCGDLFHQETLL 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + +T + ++G P + N V + G I+ V K +PNYSEF Sbjct: 65 DDAKVQLGRILEETKNSSCISLIGMPLGIDNQLFNCAVAIQKGRILGVVPKTYVPNYSEF 124 Query: 124 HEKRTFISGYS---------------NDPIVFRDIR----LGILICEDIWKNSNICKHLK 164 +E+R F SG + D ++F D + GI ICED+W Sbjct: 125 YEQRWFSSGRNALRDTIMLCGQEVPFGDDLLFEDEKGEMCFGIEICEDLWVPVPPSSFQA 184 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ---------VGGQDELI 215 GA +F+L+AS K + R E+ Q + +Y + V G +I Sbjct: 185 MAGALVIFNLSASNEIVGKYEYRKELARQQSARCIAGYVYTSSGVDESTTDVVFGGHAMI 244 Query: 216 FDGASFCFDGQQQLAFQMKHFSE-------------QNFMTEWHYD-QQLSQWNYMSDDS 261 F+ S + ++ L + FSE +FM W + ++ + + ++ Sbjct: 245 FENGSLLCESERFLIDEQLIFSEIDIQKLMNDRRKNTSFMELWRDNVREFRKVKFEIEEF 304 Query: 262 AS---TMYIPLQ-----EEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + T Y+P + + C +L ++ + +IG+SGG+DS Sbjct: 305 EAENITRYVPPHPFVPSDGSSRDRRCSEIFAIQTSALAKRIRHTGLKRAVIGISGGLDST 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVN 360 L + A + ++N+ I +P TS + +A K++ + + I D + Sbjct: 365 LALLVTAKAFDLLNIPRKNILAITMPGFGTSDVTYTNAMEFMKSMDVEIREINIKDACLQ 424 Query: 361 HFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 HF + + +PS I EN+Q+R R ILM ++N +++ T + SE+++G+ T Sbjct: 425 HF-----KDIGHDPSIHDITYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTY 479 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSAEL 473 GD + + KT V L W + + S L I P +L P A+ Sbjct: 480 NGDHMSMYAVNASIPKTLVSFLVRWVADNMLESKAKDVLYRILDTPISPELL--PPDAKG 537 Query: 474 RPHQTDQESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETVR-----Y 517 +Q ++ + PY + D + K ++ +++F + +Y D+T++ + Sbjct: 538 EINQKTEDIIGPYELHDFFLYHMLRYGAAPGKILILAKKAF---EGKYTDDTIKKWLKVF 594 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSF 543 V+ + ++KR P G K+ S Sbjct: 595 VKR-FFSQQFKRSCLPDGPKVGTISL 619 >gi|281417044|ref|ZP_06248064.1| NAD+ synthetase [Clostridium thermocellum JW20] gi|281408446|gb|EFB38704.1| NAD+ synthetase [Clostridium thermocellum JW20] Length = 645 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 142/626 (22%), Positives = 261/626 (41%), Gaps = 106/626 (16%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +LK+ + N I G I K +A G+ +++F EL I+GY DL +++ + Sbjct: 14 RLKVGGCRYNS--DQIIGLIGKGEKA-------GIQILVFPELSITGYTCGDLFHQETLL 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + +T + ++G P + N V + G I+ V K +PNYSEF Sbjct: 65 DDAKVQLGRILEETKNSSCISLIGMPLGIDNQLFNCAVAIQKGRILGVVPKTYVPNYSEF 124 Query: 124 HEKRTFISGYS---------------NDPIVFRDIR----LGILICEDIWKNSNICKHLK 164 +E+R F SG + D ++F D + GI ICED+W Sbjct: 125 YEQRWFSSGRNALRDTIMLCGQEVPFGDDLLFEDEKGEMCFGIEICEDLWVPVPPSSFQA 184 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ---------VGGQDELI 215 GA +F+L+AS K + R E+ Q + +Y + V G +I Sbjct: 185 MAGALVIFNLSASNEIVGKYEYRKELARQQSARCIAGYVYTSSGVDESTTDVVFGGHAMI 244 Query: 216 FDGASFCFDGQQQLAFQMKHFSE-------------QNFMTEWHYD-QQLSQWNYMSDDS 261 F+ S + ++ L + FSE +FM W + ++ + + ++ Sbjct: 245 FENGSLLCESERFLIDEQLIFSEIDIQKLMNDRRKNTSFMELWRDNVREFRKVKFEIEEF 304 Query: 262 AS---TMYIPLQ-----EEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + T Y+P + + C +L ++ + +IG+SGG+DS Sbjct: 305 EAENITRYVPPHPFVPSDGSSRDRRCSEIFAIQTSALAKRIRHTGLKRAVIGISGGLDST 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVN 360 L + A + ++N+ I +P TS + +A K++ + + I D + Sbjct: 365 LALLVTAKAFDLLNIPRKNILAITMPGFGTSDVTYTNAMEFMKSMDVEIREINIKDACLQ 424 Query: 361 HFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 HF + + +PS I EN+Q+R R ILM ++N +++ T + SE+++G+ T Sbjct: 425 HF-----KDIGHDPSIHDITYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTY 479 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSAEL 473 GD + + KT V L W + + S L I P +L P A+ Sbjct: 480 NGDHMSMYAVNASIPKTLVSFLVRWVADNMLESKAKEVLYRILDTPISPELL--PPDAKG 537 Query: 474 RPHQTDQESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETVR-----Y 517 +Q ++ + PY + D + K ++ +++F + +Y D+T++ + Sbjct: 538 EINQKTEDIIGPYELHDFFLYHMLRYGAAPGKILILAKKAF---EGKYTDDTIKKWLKVF 594 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSF 543 V+ + ++KR P G K+ S Sbjct: 595 VKR-FFSQQFKRSCLPDGPKVGTISL 619 >gi|310829646|ref|YP_003962003.1| hypothetical protein ELI_4098 [Eubacterium limosum KIST612] gi|308741380|gb|ADO39040.1| hypothetical protein ELI_4098 [Eubacterium limosum KIST612] Length = 665 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 130/609 (21%), Positives = 257/609 (42%), Gaps = 87/609 (14%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 VGD A N EA + + ++ F EL ++GY DL F+++ +A ++A+D +++ Sbjct: 34 VGDCAANADAVIALCAEAFEKQVGIVAFPELCVTGYTCGDLFFQRTLQKAAAAAVDKIRA 93 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--- 132 + IVVG P G+ N V + G I+ + K +P+ E++EKR F S Sbjct: 94 WSEGRAMLIVVGAPVAVGSGLYNCAVAISDGEILGIVPKTYVPDNQEYYEKRWFRSAGQL 153 Query: 133 ------YSNDPI-----------VFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + +P + ++ +GI ICED+W + GA + + + Sbjct: 154 RVSETSFFGEPAPMGTGLLFSHESWEEVVVGIEICEDLWAPVPPSSYQAAAGATIIVNPS 213 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQM 233 AS K + R ++V Q + ++ +Y + G+ +L+F G + + LA Sbjct: 214 ASNEIIGKSEYRRDLVRQQSARLNAGYLYCSSGYGESTTDLVFGGDALICEKGTLLARSR 273 Query: 234 KHFSEQNFMT------EWHYDQQL----------------SQWNYMSDDSASTM------ 265 + +E + +D+QL + + + D+ + Sbjct: 274 RFQTESQLVVADMDVEAILHDRQLQTSFGDSVDILEGRVYEECFFTACDAQDCLRSVNPQ 333 Query: 266 -YIPL------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD---- 314 ++P + E +N ++L V +++G+SGG+DS L + V+ Sbjct: 334 PFVPADTARRNERCEEIFNIQTMALGSRVAHIGDPAMVVGISGGLDSTLALLVCVNVCDQ 393 Query: 315 -ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 + ++ + + +P T+ ++ ++A + ++LG + + I + H + L Sbjct: 394 FGIDRKRIHAVTMPGFGTTDRTYDNAVSLIRSLGATFHEISIREAATHHLEDIGHDLSVH 453 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD------MSGGFN 427 + EN Q+R R ILM L+N +++ T + SE+++G+ T GD ++GG Sbjct: 454 --DVTYENAQARERTQILMDLANRLNGLVIGTGDLSELALGWATYNGDHMSMYGVNGGIP 511 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAELRPHQTDQESLPPY 486 K L + V +A I L + + + P +L P A + Q ++ + PY Sbjct: 512 --KTLVRYLVRYVADENPDEAIRRILYDVLDTPVSPELL--PPDASGKIAQKTEDLVGPY 567 Query: 487 PILDDIIKRIVENEES-----FINN---DQEYNDET----VRYVEHLLYGSEYKRRQAPV 534 + D + ++ N S +++ + Y+D T +R + ++KR P Sbjct: 568 ELHDFFMYHVLRNGYSPDKIYYLSRQAFEGAYDDATLYKWLRNFYWRFFTQQFKRSCLPD 627 Query: 535 GTKITAKSF 543 G K+ S Sbjct: 628 GPKVGTVSL 636 >gi|153953617|ref|YP_001394382.1| NAD synthetase [Clostridium kluyveri DSM 555] gi|219854239|ref|YP_002471361.1| hypothetical protein CKR_0896 [Clostridium kluyveri NBRC 12016] gi|146346498|gb|EDK33034.1| NadE [Clostridium kluyveri DSM 555] gi|219567963|dbj|BAH05947.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 638 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 137/618 (22%), Positives = 244/618 (39%), Gaps = 86/618 (13%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I IA P+ V DI N+ + ++A + L++F EL ++ Y DL ++ ++ Sbjct: 7 IRIAAACPLTNVADIEFNLNNIKICIDKALTEKSKLVVFPELSMTSYTCADLFEQQLLLE 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ L + D I VG P + N ++ G ++ + K +PNY EF+ Sbjct: 67 KSTEALKNLCDYSKDKDILIAVGAPLVFNYCLYNCAYVIFNGELLGIVPKSYIPNYEEFY 126 Query: 125 EKRTFISG----------YSNDPIVFR--------DIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G Y I F + ICED+W +L Sbjct: 127 EKRWFTEGLHIIDERVDLYFQKGIPFGVNLIFTCGKFKFAFEICEDLWAVIPPSSYLTLM 186 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R +V+ Q + +YV+ +L+F G C Sbjct: 187 GANIIGNLSASNEIVSKSFYRRNLVSSQSARCMCSYMYVSSGVFESSTDLVFSG-DLCIC 245 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM------------- 265 L + F+ N + D Q+L ++ + + Sbjct: 246 ENGTLLKANERFNRDNEVITSIVDLGRLNNQRLKNVSFRDNVKKCSQRPVNIEFQFENLD 305 Query: 266 ------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P E E + +N +L V N K +IG+SGG+DS L Sbjct: 306 CGEFDRNIDKHPFVPSNEYEREARCREIFNIQTSALAKRVSHTNLKKAVIGISGGLDSTL 365 Query: 308 CAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V + ++N+ TI +P T+ ++ +A + K LG ++ + I D Sbjct: 366 ALLVTVKTFDVLKISRKNIITITMPGFGTTDRTYNNAVSLCKNLGTEFREINIVDACLQH 425 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F +S + + EN+Q+R R I+M ++N + + T + SE+++G+ T GD Sbjct: 426 FKDISH--NRDIHDVTYENVQARERTQIIMDIANKEGGLAIGTGDLSELALGWCTYNGDH 483 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSAELRPHQ 477 + + KT V L + ++ +G L + P +L K E+ Q Sbjct: 484 MSMYGVNCSVPKTLVRYLVRYVADREVSKNIGDILIDVLNTPVSPELLPKGKDGEI--SQ 541 Query: 478 TDQESLPPYPILDDIIKRIVENEES-----FINNDQEYNDETVRYVEHLL-------YGS 525 ++ + PY + D + V + S F+ +D + +E L + Sbjct: 542 KTEDIVGPYELHDFFLYYFVRHNYSHKKILFLAKHAFKDDYDISTIEKWLNMFIRRFFTQ 601 Query: 526 EYKRRQAPVGTKITAKSF 543 ++KR P G K+ S Sbjct: 602 QFKRSAIPDGPKVGTVSL 619 >gi|316940918|gb|ADU74952.1| NAD+ synthetase [Clostridium thermocellum DSM 1313] Length = 645 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 142/626 (22%), Positives = 261/626 (41%), Gaps = 106/626 (16%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +LK+ + N I G I K +A G+ +++F EL I+GY DL +++ + Sbjct: 14 RLKVGGCRYNS--DQIIGLIGKGEKA-------GIQILVFPELSITGYTCGDLFHQETLL 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + +T + ++G P + N V + G I+ V K +PNYSEF Sbjct: 65 DDAKVQLGRILEETKNSSCISLIGMPLGIDNQLFNCAVAIQKGRILGVVPKTYVPNYSEF 124 Query: 124 HEKRTFISGYS---------------NDPIVFRDIR----LGILICEDIWKNSNICKHLK 164 +E+R F SG + D ++F D + GI ICED+W Sbjct: 125 YEQRWFSSGRNALRDTIMLCGQEVPFGDDLLFEDEKGEMCFGIEICEDLWVPVPPSSFQA 184 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ---------VGGQDELI 215 GA +F+L+AS K + R E+ Q + +Y + V G +I Sbjct: 185 MAGALVIFNLSASNEIVGKYEYRKELTRQQSARCIAGYVYTSSGVDESTTDVVFGGHAMI 244 Query: 216 FDGASFCFDGQQQLAFQMKHFSE-------------QNFMTEWHYD-QQLSQWNYMSDDS 261 F+ S + ++ L + FSE +FM W + ++ + + ++ Sbjct: 245 FENGSLLCESERFLIDEQLIFSEIDIQKLMNDRRKNTSFMELWRDNGREFRKVKFEIEEF 304 Query: 262 AS---TMYIPLQ-----EEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + T Y+P + + C +L ++ + +IG+SGG+DS Sbjct: 305 EAENITRYVPPHPFVPSDGSSRDRRCSEIFAIQTSALAKRIRHTGLKRAVIGISGGLDST 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVN 360 L + A + ++N+ I +P TS + +A K++ + + I D + Sbjct: 365 LALLVTAKAFDLLNIPRKNILAITMPGFGTSDVTYTNAMEFMKSMDVEIREINIKDACLQ 424 Query: 361 HFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 HF + + +PS I EN+Q+R R ILM ++N +++ T + SE+++G+ T Sbjct: 425 HF-----KDIGHDPSIHDITYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTY 479 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSAEL 473 GD + + KT V L W + + S L I P +L P A+ Sbjct: 480 NGDHMSMYAVNASIPKTLVSFLVRWVADNMLESKAKDVLYRILDTPISPELL--PPDAKG 537 Query: 474 RPHQTDQESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETVR-----Y 517 +Q ++ + PY + D + K ++ +++F + +Y D+T++ + Sbjct: 538 EINQKTEDIIGPYELHDFFLYHMLRYGAAPGKILILAKKAF---EGKYTDDTIKKWLKVF 594 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSF 543 V+ + ++KR P G K+ S Sbjct: 595 VKR-FFSQQFKRSCLPDGPKVGTISL 619 >gi|325262098|ref|ZP_08128836.1| glutamine-dependent NAD+ synthetase [Clostridium sp. D5] gi|324033552|gb|EGB94829.1| glutamine-dependent NAD+ synthetase [Clostridium sp. D5] Length = 640 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 138/615 (22%), Positives = 257/615 (41%), Gaps = 94/615 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N K A EEA+++ +++F EL I+GY DL + ++ Sbjct: 6 VKVAAATPDIRVADVTYNTKKICEAIEEADQERAKILVFPELCITGYTCGDLFTQDVLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ + T D + VG P + N L+ G ++ + K LPNY EF+ Sbjct: 66 DAKAALLKIAGFTADKDILVFVGLPLSVDGKLYNVAAALNRGEVLGLTTKTFLPNYGEFY 125 Query: 125 EKRTFISGYS--------------NDPIVFRDIRLGIL-----ICEDIWKNSNICKHLKK 165 E R F G I+F+ + L ICED+W Sbjct: 126 EMRQFTPGPDAAREILFDGSLVPFGPQILFQATTMEELIVSAEICEDVWSPIPPSIQAAM 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K + R E++ GQ + + IY N G+ +L+F G + Sbjct: 186 EGATVIVNCSASDETIGKGRYRRELIQGQSARLIAGYIYANAGEGESTTDLVFGGHNLIT 245 Query: 224 DGQQQLA----------------FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM-- 265 + L +++ +N + +++L + + + +T+ Sbjct: 246 ENGAVLKEARRFRNDMIYSELDIYRLTGERRKNTTFKTTGERRLIRVPFYMELEKTTLTR 305 Query: 266 ------YIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC---A 309 ++P+ E+E C + L+ + + ++G+SGG+DS L Sbjct: 306 HFPKHPFVPVNEKER-ARRCEEILTIQAMGLKKRLAHTHARSAVVGISGGLDSTLALLVT 364 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A A + LG K+ + + +P T+ ++ ++A A LG + I D V+ F + Sbjct: 365 ARAFEMLGRDKKEIIAVTMPCFGTTDRTYQNACKMAVQLGAGLREVGIADAVSIHFRDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + + EN Q+R R +LM ++N M++ T + SE+++G+ T GD + Sbjct: 425 H--DPKDHSVTYENAQARERTQVLMDIANEMGGMVIGTGDMSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGP---LTEVIPPSILEKSPSAELRP------HQT 478 + KT V L + + + P L EV+ +L+ S EL P Q Sbjct: 483 VNASVPKTLVRHLVKY------AADVTPDEQLKEVL-YDVLDTPVSPELLPPKDGNIAQK 535 Query: 479 DQESLPPYPILDDIIKRIVE-----------NEESFINNDQEYNDETV-RYVEHL---LY 523 ++ + PY + D + +V E+F + Y++ T+ +++E + Sbjct: 536 TEDLVGPYELHDFFLYYLVRFGYEPSKIFRLAAETF---EDSYDNVTILKWLETFCRRFF 592 Query: 524 GSEYKRRQAPVGTKI 538 ++KR P G K+ Sbjct: 593 SQQFKRSCLPDGPKV 607 >gi|218132866|ref|ZP_03461670.1| hypothetical protein BACPEC_00727 [Bacteroides pectinophilus ATCC 43243] gi|217991739|gb|EEC57743.1| hypothetical protein BACPEC_00727 [Bacteroides pectinophilus ATCC 43243] Length = 640 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 122/552 (22%), Positives = 225/552 (40%), Gaps = 73/552 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ + + V D N + ++A + +I+F E+ I+GY DL + + + Sbjct: 6 VRVEVVTPDIKVADCIFNTEQICSRIDKAYDAQVSVIVFPEMCITGYTCNDLFLQDTLLS 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ T+ T VVG P + + N ++ G I+ + K +PNY+EF+ Sbjct: 66 DAQKSLATITEYTKGKNMLTVVGLPFEYCNKLYNVAAVIKDGVILGLVPKKYIPNYNEFY 125 Query: 125 EKRTFISG--------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLKK 165 E+R F G Y I+FR + +G+ ICED+W Sbjct: 126 ERRQFTEGFDKAVKVCVAGQQTYMGSRILFRCSDFEKLVVGVEICEDLWTPLPPSVSHAM 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +VTGQ + + Y + G+ +++F G Sbjct: 186 NGATLIVNPSASNETVGKEDYRRSLVTGQSARLVCAYAYASSGDGESTQDIVFGGHDIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST------------------- 264 + LA + F+ + + + +D+ S+ MS +++T Sbjct: 246 ENGTLLA-ETSLFANNSVINDIDFDRLNSERRRMSTFTSATDNDEYTVVDFSLAGTEYTS 304 Query: 265 --------MYIPLQEE------EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 ++P E EA + + L+ + V+IG+SGG+DS L Sbjct: 305 LVRFIDPHPFVPENEATRNKRCEAILSIQAMGLKKRLAHIGCKNVVIGISGGLDSTLALL 364 Query: 311 IAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 +AV A G + + +P T+ ++ ++A K+LGC + + I + V F Sbjct: 365 VAVRAYGLLGLDMSGIHAVTMPGFGTTDRTYDNAVKMIKSLGCTFHEISIRESVTRHFED 424 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + + EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 425 IGHDINVH--DVTYENGQARERTQILMDIANKVNGIVIGTGDMSELALGWATYNGDHMSM 482 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQT 478 + + KT V L + S L + +L+ S EL P Q Sbjct: 483 YGVNASVPKTLVRHLVRYYAEVLADSTLAKVLY----DVLDTPVSPELLPPDENGQIEQK 538 Query: 479 DQESLPPYPILD 490 ++ + PY + D Sbjct: 539 TEDLVGPYELHD 550 >gi|325970640|ref|YP_004246831.1| NAD+ synthetase [Spirochaeta sp. Buddy] gi|324025878|gb|ADY12637.1| NAD+ synthetase [Spirochaeta sp. Buddy] Length = 635 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 140/615 (22%), Positives = 251/615 (40%), Gaps = 85/615 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A+A + D N + +A ++ + L++ EL S Y DL +K+ + Sbjct: 6 IKCAVASARVKIADCHFNTQSVIQLMHQAQQKQVRLLVLPELVTSAYTCADLFLQKTLQE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C AI+ + +++ +V G + + N V++ +G I+ + K +LPNY EF+ Sbjct: 66 GCLEAIEAIVNESKKLDVLLVFGSLLVVEGNLYNCAVVVHSGVILGIVPKQHLPNYQEFY 125 Query: 125 EKRTFI--------------SGYSNDPIVF--RDIRLGIL---ICEDIW-KNSNICKHLK 164 EKR F S + ++F ++IR IL ICED+W NS H Sbjct: 126 EKRWFCTPEDANREITLLGQSTWFGTRLLFQNKEIREFILACEICEDLWVPNSPSIGH-A 184 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + + +AS K + R ++ Q + + +Y + G+ +L+F + Sbjct: 185 LAGATVITNCSASDELVGKEEYRRNLIAMQSAKLVCAYVYSDAGQGESSTDLVFTPHNLI 244 Query: 223 FDGQQQLA------------------FQMKHFSEQNFMTEWHYDQQLS-QWNYMSDDSAS 263 ++ LA ++ Q F + Q +S W + D Sbjct: 245 YENGLPLASAFGISDTLVSTEIDVQKLALERIRMQTFKPDRKAYQTISFSWKVAACDLTR 304 Query: 264 TM----YIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + ++P +E C L L+ +++ + V++GLSGG+DS L + Sbjct: 305 PIDKAPFVP-SDEANRSERCEKILMLQALGLKQRLEQTHIQSVVVGLSGGLDSTLALLVC 363 Query: 313 VDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A L + N+ + +P T+ ++ +A A ALG + I V F + Sbjct: 364 VRAFDLLGLDRSNITAVTMPGFGTTKRTKGNAVKLANALGVALRTISIAKAVGQHFKDIG 423 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + EN Q+R R +LM L+N A+++ T + SE+++G+ T GD + Sbjct: 424 H--DSAVLDVTYENSQARERTQVLMDLANKLNALVVGTGDLSELALGWATYNGDHMSMYG 481 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD-------Q 480 + KT V L S + L +V+ + S EL P +D + Sbjct: 482 VNASVPKTLVRHLVKHVASKSEQTLKKVLLDVVATPV-----SPELLPANSDGTIKQVTE 536 Query: 481 ESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV----RYVEHLLYGSEYK 528 + + PY + D + +IV + I +EY D + + + ++K Sbjct: 537 DIVGPYELHDFFLYQIVRWGFGPSKVYRLACIAFAEEYEDSFILVWLKTFYRRFFNQQFK 596 Query: 529 RRQAPVGTKITAKSF 543 R P G KI + S Sbjct: 597 RSCMPDGPKIGSLSL 611 >gi|153807936|ref|ZP_01960604.1| hypothetical protein BACCAC_02222 [Bacteroides caccae ATCC 43185] gi|149129545|gb|EDM20759.1| hypothetical protein BACCAC_02222 [Bacteroides caccae ATCC 43185] Length = 641 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 133/557 (23%), Positives = 234/557 (42%), Gaps = 81/557 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ + A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVERIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+NS V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINSAVVIQKGKVLGVTAKTYLPNYKEFY 125 Query: 125 EKRTFISG--YSNDPIVF---------------RDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S + D + D GI ICED+W L QG Sbjct: 126 EQRWFTSAIQLTTDNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPII--YVNQVGGQDE----LIFDGASF 221 AE LF+++A N+ +H + IS I YV G E ++F G Sbjct: 186 AEILFNMSAD----NEGIGKHNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGL 241 Query: 222 CFDGQQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNY----------MSDDSASTM---- 265 ++ LA + + FS EQ ++E ++ ++ + D A ++ Sbjct: 242 IYENGSLLA-RSERFSMEEQLIISEIDVERIRAERRINTTFAANQAKLRDKRAVSVATEF 300 Query: 266 ----------------YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 ++P +E E + V L + ++G+SGG+D Sbjct: 301 VNSKELTLTRSFHPHPFVPQGKELNEHCEDIFAIQVAGLAQRLVHTGAKTAVVGISGGLD 360 Query: 305 SALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-L 358 S L + V D LG ++ + I +P T+ ++ +A K+LG + I D Sbjct: 361 STLALLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAINLMKSLGISIREISIKDAC 420 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + HF + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T Sbjct: 421 IQHFKDIDHDINVHD---VTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATY 477 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAEL 473 GD + + KT V L W +G+ T+ L + I P ++ + E+ Sbjct: 478 NGDHMSMYGVNASVPKTLVKYLVQWVAENGVDEDSKTTLLDIVDTPISPELIPADENGEI 537 Query: 474 RPHQTDQESLPPYPILD 490 + Q ++ + PY + D Sbjct: 538 K--QKTEDLVGPYELHD 552 >gi|323484882|ref|ZP_08090237.1| hypothetical protein HMPREF9474_01988 [Clostridium symbiosum WAL-14163] gi|323401763|gb|EGA94106.1| hypothetical protein HMPREF9474_01988 [Clostridium symbiosum WAL-14163] Length = 641 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 118/507 (23%), Positives = 210/507 (41%), Gaps = 68/507 (13%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 E +G +++F EL ++GY +L +K + + L T + G P + Sbjct: 35 EGRERGAKIMVFPELVLTGYTCGELFNQKPLLTKAREELKKLVDFTAGSDMLVFAGVPWE 94 Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS--------------NDP 137 + N+ + G ++A+ K+ LPNYSEF+E R F G+ Sbjct: 95 YNNKLYNTAAAIQDGELLALIPKMCLPNYSEFYELRYFNPGFEKPVAVPWEDGYVLMGSK 154 Query: 138 IVF-----RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVT 192 I+F ++ +G ICED+W + GA + + +AS K R +++ Sbjct: 155 ILFNCANVENLVVGAEICEDVWVLNPPSIGHASAGATVIVNCSASDETTGKSDYRRSLIS 214 Query: 193 GQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD-- 248 GQ + + IY N G+ +L+F G + + LA + + F + + + Sbjct: 215 GQSARLLCGYIYANAGEGESTQDLVFGGQNIIAENGTMLA-ESRRFENETVYADMDLERL 273 Query: 249 ----------QQLSQWNYMSDDSA-------------STMYIPLQEEEADYNAC------ 279 Q + NY+ D + + ++P Q+EE+ C Sbjct: 274 ECERRRMTTYQTAGRENYVFIDFSLYEDENRPERFIDPSPFVP-QDEESRNRRCEEILSI 332 Query: 280 -VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSP 333 + L+ ++ +IG+SGG+DS L + V A L ++ + + +P T+ Sbjct: 333 QAMGLKKRLKHTGCRSAVIGISGGLDSTLALLVTVRAFDLLGLARDKIICVTMPCFGTTD 392 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLV-NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 ++ +A K LG + I D V NHF + + EN Q+R R +LM Sbjct: 393 RTYHNACYLTKKLGASLLEVDIKDAVANHFRDIGH---DSSVHDVTYENSQARERTQVLM 449 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++N M++ T + SE+++G+ T GD + + KT V L + T G Sbjct: 450 DIANKYNGMVIGTGDMSELALGWATYNGDHMSMYGVNSSVPKTLVRHLVRY---FADTCG 506 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTD 479 L+EV+ +L+ S EL P + D Sbjct: 507 EKELSEVL-LDVLDTPVSPELLPPEKD 532 >gi|268610972|ref|ZP_06144699.1| NAD+ synthetase [Ruminococcus flavefaciens FD-1] Length = 637 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 133/552 (24%), Positives = 231/552 (41%), Gaps = 77/552 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA A + V D N + EA+ + + +I F EL ++GY DL + + + Sbjct: 6 IKIACATPDIKVADCQYNADRIIELITEAHSKRVKIICFPELSVTGYTCGDLFLQDALLS 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + S + + +T ++G P + N VI + G ++ K N+PNYSEF+ Sbjct: 66 SAKSELVRIVKETEKLDIVSIIGMPLTVCGKLYNCAVIANKGKVLGAVAKKNIPNYSEFY 125 Query: 125 EKRTFISGYSNDPI-----------------VFR-----DIRLGILICEDIWKNSNICKH 162 E R F + +ND + VF ++ GI ICED+W S + Sbjct: 126 EMRHFTA--ANDGLCADIQLNDEYTIHIEETVFTCKELPELAFGIEICEDMWVGSPPSER 183 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 L GA +F+L+AS K R ++ + + + Y + G+ ++IF G + Sbjct: 184 LAASGAVIIFNLSASDEVIGKADYRRTLIKSRSASLTCAYAYADSGIGESTQDMIFAGHN 243 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAS----------------- 263 + LA + K FS + + + + M+ SAS Sbjct: 244 IIAENGSLLA-ESKAFSSGLSIADIDIKKLYYERRRMNTFSASPSIYTSYFSLNVTNTVL 302 Query: 264 ------TMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 T ++P + + D + C + L ++ ++GLSGG+DS L Sbjct: 303 DRVFSQTPFVPSDKMQLD-SRCEEILTMQAVGLMTRLRHIGCKNAVLGLSGGLDSTLALI 361 Query: 311 IAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 +AV A L ++ + TI +P T+ ++ +A AKA G + I V FS Sbjct: 362 VAVHAFDLLELDRKGIHTITMPCFGTTDRTYNNACLLAKAYGSTLIEINICSSVMQHFSD 421 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + Q + + EN Q+R R +LM +N +++ T + SE+++G+ T GD Sbjct: 422 IGQ--SPDIHDVTYENSQARERTQVLMDKANQFGGIVIGTGDLSELALGWATYNGDHMSM 479 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQT 478 + + KT L W ++ G L +++ IL+ S EL P Q Sbjct: 480 YAVNSSIPKT----LVRWLVNYEAEISEGELKKIL-FDILDTPVSPELLPPKKNGTISQK 534 Query: 479 DQESLPPYPILD 490 ++ + PY + D Sbjct: 535 TEDIVGPYELHD 546 >gi|298372069|ref|ZP_06982059.1| glutamine-dependent NAD+ synthetase [Bacteroidetes oral taxon 274 str. F0058] gi|298274973|gb|EFI16524.1| glutamine-dependent NAD+ synthetase [Bacteroidetes oral taxon 274 str. F0058] Length = 637 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 141/616 (22%), Positives = 248/616 (40%), Gaps = 94/616 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + +A+ G++++ F EL ++ Y DL K SF+ Sbjct: 6 VRVAAAVPLVKVADCKENSERILGLIRQADSAGVEIVCFPELSVTAYTCADLFLKSSFVA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L S T D +VG P + N V G I+ V K LPN +EF+ Sbjct: 66 QAERALAFLLSQTEDLNIVSIVGLPVAADNRLFNCAVAFQRGKILGVVPKSYLPNSNEFY 125 Query: 125 EKRTFISGYSNDP---------------IVF--RDIRLGILICEDIWKNSNICKHLKKQG 167 E R F SG P +F R++ I IC+D+W +G Sbjct: 126 EYRWFASGLGLAPKDITLAGQQCCLCANTLFRSRELSFSIEICQDLWAVVPPSSKQALEG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 + +F+L+AS K R +V + +Y + G+ +++F ++ + Sbjct: 186 SHIIFNLSASDELAGKNDYRRTLVAQHSGRCNAGYVYASAGFGESSTDVLFASSAIIAEN 245 Query: 226 QQQLAFQMK-HFSEQNFMTEW----------------HYDQQLSQWNYMSDDSASTMYIP 268 LA + F +Q +TE +Y + + W S + + Sbjct: 246 GVILAESNRFSFDQQLVITEIDIERLRNDRLHNDSFKNYVSEANLWRVHSFEIKEIGSLD 305 Query: 269 LQEE-----------EADYNACVL------SLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 L E + D C + +L + K +IG+SGG+DS+L + Sbjct: 306 LTREVSKHPFVPAGDKLDERCCEIFDIQSNALAIRLANTGIDKAVIGISGGLDSSLALMV 365 Query: 312 AVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 V+A K N+ I +P T+ ++ +++ ++LG + I V F + Sbjct: 366 TVEAFDKLSIPRSNIIGITMPGFGTTSRTEDNSMVLMESLGISARRISIEKAVMQHFVDI 425 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 ++ EN Q+R R ILM ++N A+++ T + SE+++G+ T GD + Sbjct: 426 GH--NKDIHDTTYENSQARERTQILMDVANKEGALVVGTGDMSELALGWCTYNGDHISMY 483 Query: 427 NPLKDLYKTQVFQLASWR---NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD---- 479 + KT V L W S G T+ I +L+ S EL PH D Sbjct: 484 GVNSGVPKTLVRHLVEWAARCKSDGETAK-------ILLDVLDTPISPELLPHSNDSISQ 536 Query: 480 --QESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETVRYVEHL----L 522 ++ + PY + D + K ++ ++SF N +Y+ E ++ ++ Sbjct: 537 KTEDIVGPYELHDFFLYHFLRFGYNADKMLLFAKKSFEN---DYSVENIKKWLNVFLSRF 593 Query: 523 YGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 594 FSQQFKRSCMPDGVKV 609 >gi|187777631|ref|ZP_02994104.1| hypothetical protein CLOSPO_01223 [Clostridium sporogenes ATCC 15579] gi|187774559|gb|EDU38361.1| hypothetical protein CLOSPO_01223 [Clostridium sporogenes ATCC 15579] Length = 638 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 143/618 (23%), Positives = 243/618 (39%), Gaps = 96/618 (15%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I ++ PV V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDMCIEKKSKLIVFPELSITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I VG P + + N VI+ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAVGAPLLYKNSLYNCAVIIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGY------------SNDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N P ++F D + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQKNIPFGTNLIFSDKFFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM------------- 265 L + K F +N + D ++L ++ + + Sbjct: 248 NGSILK-ENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFKFTIND 306 Query: 266 ------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P EEE +N +L + N K +IG+SGG+DS L Sbjct: 307 VGVFDRPIDKYPFVPSNEEERAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTL 366 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + K EN+ TI +P T+ ++ +A + K L + I D Sbjct: 367 ALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQH 426 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 427 FKDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDH 484 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 ++ + KT V L + + + + I IL+ S EL P Sbjct: 485 MSMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEGNI 540 Query: 477 -QTDQESLPPYPILD-------------DIIKRI--VENEESFINNDQEYNDETVRYVEH 520 Q ++ + PY + D D IK++ + ++S+ D+E D+ Y Sbjct: 541 SQKTEDIVGPYELHDFFLYYFIRQGTTPDKIKQLAKIAFKDSY---DKETIDKWFSYFIR 597 Query: 521 LLYGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 598 RFFTQQFKRSAVPDGPKV 615 >gi|15895058|ref|NP_348407.1| NAD synthetase [Clostridium acetobutylicum ATCC 824] gi|15024753|gb|AAK79747.1|AE007687_4 NH(3)-dependent NAD(+) synthase (nadE) fused to amidohydrolase domain [Clostridium acetobutylicum ATCC 824] gi|325509196|gb|ADZ20832.1| NAD synthetase [Clostridium acetobutylicum EA 2018] Length = 642 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 122/505 (24%), Positives = 207/505 (40%), Gaps = 83/505 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++ +A N V I + KA R R + +++F EL ++GY DL + I+ Sbjct: 18 ELKVANPNYNVKSIISIMKKAYR------RHHIKVLVFPELCVTGYTCGDLFNQNLLIKR 71 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + ++ L T + VG P + + N VI++ GNI+ V K +P Y+EF+E Sbjct: 72 AENELNNLLVSTSNINMITAVGMPVKADNQLFNCAVIINNGNILGVVPKTFIPTYNEFYE 131 Query: 126 KRTFISGYS---------------NDPIVFRDIR----LGILICEDIWKNSNICKHLKKQ 166 KR F S + ++F+DI +GI ICED+W N + Sbjct: 132 KRNFAGAISRISDEIILCGKKVPFGENLLFKDIYSELCIGIDICEDLWVNIPPSSYHTLN 191 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN--QVGGQDELIFDGASFCFD 224 GA + +L+AS K R ++V Q + Y + Q +L+F G S D Sbjct: 192 GANLILNLSASDEIVAKSDYRRDLVRLQSAKCITSYAYASSGQTESTSDLVFSGHSIIAD 251 Query: 225 GQQQLA---------------------------------FQMKHFSEQNFMTEWHYDQQL 251 L + K + NF ++ + L Sbjct: 252 NGSILKDIKFEEASYVKYADVDIEKLISDRIKFNTYMGRIEDKEYRTINFHLGYNENMHL 311 Query: 252 SQWNYMSDDSASTMYIPLQE--------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++ ++ ++P + E D A L R + K +K ++G+SGG+ Sbjct: 312 ERY------VEASPFVPSNKSKRNIRCREILDLQASGLYQR--LNKTGINKAVVGISGGL 363 Query: 304 DSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + V+A K +N+ I +P T+ ++ +A K LG + I Sbjct: 364 DSTLALLVIVEAFKKLKAPMKNIIGITMPGFGTTRRTYNNAVELMKKLGITIKEISIKKA 423 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F+ + Q L + + EN Q+R R ILM ++N A+++ T + SE+++G+ T Sbjct: 424 CIQHFNDIGQDLNTHDT--IYENSQARERTQILMDIANKEGAIVVGTGDLSELALGWCTY 481 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASW 443 GD + + KT V L W Sbjct: 482 NGDQMSMYGVNSSIPKTLVKYLIMW 506 >gi|323693750|ref|ZP_08107947.1| glutamine-dependent NAD+ synthetase [Clostridium symbiosum WAL-14673] gi|323502201|gb|EGB18066.1| glutamine-dependent NAD+ synthetase [Clostridium symbiosum WAL-14673] Length = 641 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 118/507 (23%), Positives = 210/507 (41%), Gaps = 68/507 (13%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 E +G +++F EL ++GY +L +K + + L T + G P + Sbjct: 35 EGRERGAKIMVFPELVLTGYTCGELFNQKPLLTKAREELKKLVDFTAGSDMLVFAGVPWE 94 Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS--------------NDP 137 + N+ + G ++A+ K+ LPNYSEF+E R F G+ Sbjct: 95 YNNKLYNTAAAIQDGELLALIPKMCLPNYSEFYELRYFNPGFEKPVAVPWEDGYVLMGSK 154 Query: 138 IVF-----RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVT 192 I+F ++ +G ICED+W + GA + + +AS K R +++ Sbjct: 155 ILFNCANVENLVVGAEICEDVWVLNPPSIGHASAGATVIVNCSASDETTGKSDYRRSLIS 214 Query: 193 GQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD-- 248 GQ + + IY N G+ +L+F G + + LA + + F + + + Sbjct: 215 GQSARLLCGYIYANAGEGESTQDLVFGGQNIIAENGTMLA-ESRRFENETVYADMDLERL 273 Query: 249 ----------QQLSQWNYMSDDSA-------------STMYIPLQEEEADYNAC------ 279 Q + NY+ D + + ++P Q+EE+ C Sbjct: 274 ECERRRMTTYQTAGRENYVFIDFSLHEDENRPERFIDPSPFVP-QDEESRNRRCEEILSI 332 Query: 280 -VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSP 333 + L+ ++ +IG+SGG+DS L + V A L ++ + + +P T+ Sbjct: 333 QAMGLKKRLKHTGCRSAVIGISGGLDSTLALLVTVRAFDLLGLARDKIICVTMPCFGTTD 392 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLV-NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 ++ +A K LG + I D V NHF + + EN Q+R R +LM Sbjct: 393 RTYHNACYLTKKLGASLLEVDIKDAVANHFRDIGH---DSSVHDVTYENSQARERTQVLM 449 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++N M++ T + SE+++G+ T GD + + KT V L + T G Sbjct: 450 DIANKYNGMVIGTGDMSELALGWATYNGDHMSMYGVNSSVPKTLVRHLVRY---FADTCG 506 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTD 479 L+EV+ +L+ S EL P + D Sbjct: 507 EKELSEVL-LDVLDTPVSPELLPPEKD 532 >gi|160893991|ref|ZP_02074770.1| hypothetical protein CLOL250_01546 [Clostridium sp. L2-50] gi|156864369|gb|EDO57800.1| hypothetical protein CLOL250_01546 [Clostridium sp. L2-50] Length = 667 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 155/662 (23%), Positives = 266/662 (40%), Gaps = 113/662 (17%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANR---QGMDLILFTELFISGYPPEDLVFKKSFI 63 + IA ++P V GN+ K E R + +D+I+ EL ++GY DL + I Sbjct: 13 VRIASVSPRVH--LGNVTKNCEEIETVYRTYAEQVDVIVTPELSLTGYTCGDLFVNRRLI 70 Query: 64 QACSSAIDTLKSDTHD---GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + L T + GA +VVG P + + N L G ++A+ K+ LPNY Sbjct: 71 DRAEEGLLQLAKMTAEYGKKGAALVVGVPYEVDGELFNCGAFLWNGTVLALTPKVYLPNY 130 Query: 121 SEFHEKRTFISG--YSNDPIVFRD-----------------------IRLGILICEDIWK 155 EF+EKR F SG N + D + G+ ICED+W Sbjct: 131 GEFYEKRWF-SGRRVENRTVEMADGSETLFGNSILLEMTDPNQQEEHVTFGMEICEDLWT 189 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDE 213 + L QGAE L +L+AS K + R + S +Y + + Sbjct: 190 PIAPGRLLALQGAEILLNLSASNEVIGKEQYRRTLTGSMSSSCICGYVYTSAGAYESTSD 249 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSE----QNF-MTEWHYDQ-----------QLSQWNYM 257 L+F G + ++ + L ++K F + ++F MT+ +D+ YM Sbjct: 250 LVFSGHNLMYENGKLLG-EIKPFEDGILIRDFNMTKIRHDRLANKSFAECKRNFDAGEYM 308 Query: 258 SDDS--------------ASTMYIP----LQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + + T ++P L+ + + V L+ ++ + +++G+ Sbjct: 309 TVTCEKVFAEKKEVCARVSMTPFVPSKNRLERCRSIFAMQVAGLQRRIEATHASCIVVGV 368 Query: 300 SGGIDSALC---AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L +A AV LG E V I +P T+ ++ ++ + LGC + Sbjct: 369 SGGLDSTLALLVSAQAVKNLGLPPETVTGITMPGFGTTKRTKSNSTTLMELLGCDIREIS 428 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I D V F+ + Q E I EN Q+R R ILM ++N ++ T + SE+++G Sbjct: 429 IVDSVRQHFADIGQ--DEAVHDITYENCQARERTQILMDVANKEGGFVIGTGDLSELALG 486 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT V L +G + +VI I++ S EL Sbjct: 487 WCTYNGDHMSMYAVNTSIPKTLVRTLVDEVGHDMDRNGFPGIKDVI-EDIIDTPVSPELL 545 Query: 475 PHQTD-------------------------QESLPPYPILDDIIKRIVENEESFINNDQE 509 P D + + P + D + + ++ E+ + + E Sbjct: 546 PPNADGTIAQKTEDTVGSYILHDFFLYYTLRYGMEPEEVYDLCKEAVRQSVEALQDGETE 605 Query: 510 ---YNDETVRYVEHLLYG----SEYKRRQAPVGTKITAKSFG--RDRLYPISNKFRDHIS 560 + DE ++ + + Y ++KR P G K+ S D P +F D ++ Sbjct: 606 AYTFTDEEIKKWQKVFYTRFFRQQFKRNCMPDGVKVGTVSVSPRGDLRLPSEIEFEDFLT 665 Query: 561 EE 562 E Sbjct: 666 FE 667 >gi|254168754|ref|ZP_04875596.1| NAD+ synthetase [Aciduliprofundum boonei T469] gi|289596848|ref|YP_003483544.1| NAD+ synthetase [Aciduliprofundum boonei T469] gi|197622380|gb|EDY34953.1| NAD+ synthetase [Aciduliprofundum boonei T469] gi|289534635|gb|ADD08982.1| NAD+ synthetase [Aciduliprofundum boonei T469] Length = 263 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 23/212 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD+V N +IGLSGG+DS+ A + V ALGK+ V + +P T + EDA Sbjct: 18 IRDFVGDKN---AVIGLSGGLDSSTVAFLCVKALGKDKVLGVHMPDSITPKEDKEDAKLV 74 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG ++ + I ++V + L+ E S N+++RIR IL ++N ++ Sbjct: 75 AEKLGIEFRTIEIGEIVEKMNEKIK--LKNEMS---TANLKARIRMAILYGIANDENRLV 129 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSNKSEI +GY T YGD + F P+ DLYKTQV LA LG +P Sbjct: 130 TGTSNKSEILIGYFTKYGDGASDFAPIGDLYKTQVRMLA---------EKLG-----VPS 175 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDII 493 I+ K+P+A L P Q+D++ + Y ILD I+ Sbjct: 176 RIISKAPTAGLLPGQSDEKEIGIKYEILDKIL 207 >gi|282877516|ref|ZP_06286334.1| NAD+ synthetase [Prevotella buccalis ATCC 35310] gi|281300340|gb|EFA92691.1| NAD+ synthetase [Prevotella buccalis ATCC 35310] Length = 685 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 125/530 (23%), Positives = 210/530 (39%), Gaps = 91/530 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+ + +A QG+++I+F EL I+ Y +DL + + Sbjct: 6 IKVACAVPLVKVADCKYNVEQTEAQIAQAEEQGVEIIVFPELGITSYTCQDLFQQNLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +++ L T ++VG P + +LN +++ G II V K LP+YSEF+ Sbjct: 66 ASEASVLHLLEFTRKLDVIVIVGLPIIVGDLLLNCGMVIQQGQIIGVIPKTYLPDYSEFY 125 Query: 125 EKRTFISG----------------YSNDPIVF---RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S + DP +F ++ G+ ICED+W L Sbjct: 126 EKRWFASSQDLKETTIRYAGQQIVVTPDPQIFVTADGVQFGVEICEDVWAPVPPSNTLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD------------- 212 GA+ +F+L+AS K +++ Q S +Y G+ Sbjct: 186 AGADIIFNLSASDAVVGKYNYLKSLLSQQSSRTITGYVYATSGFGESTQDLVYAGNGLIY 245 Query: 213 ---ELIFDGASFCFDGQQQLA-FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP 268 L+ +G F F+GQ Q A ++ + + + Q NY + IP Sbjct: 246 EKGTLLAEGKRFTFEGQIQTAQIDIEMLRAERRTNSTYVNAQRQVNNYAKQKGFADNLIP 305 Query: 269 LQ------EEEADYNACVLSLRDY------------------------------------ 286 Q Y C+ LR Y Sbjct: 306 NQFAIFSSGSTIHYLQCLSCLRSYDFKLEREINPHPFLPDTEQLDESCEEVLNIQSMGLA 365 Query: 287 --VQKNNFHKVIIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDA 339 ++ ++G+SGG+DS L + V D LG ++ + + +P T+ ++ +A Sbjct: 366 TRIKHIGCRNAVLGISGGLDSTLALLVCVLTFDQLGYDRKGIIGVTMPGFGTTDRTYHNA 425 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNH 397 + LG + I VN F + + +P+ EN Q+R R ILM LSN Sbjct: 426 IDLMQELGITIKEIDIRKSVNQHF----EDIGHDPNVHDATYENCQARERTQILMDLSNQ 481 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A+++ T + SE+++G+ T GD + + KT + L + H Sbjct: 482 LNALVVGTGDLSELALGWATYNGDHMSMYGVNAGVPKTMIRFLVRFYAQH 531 >gi|160883261|ref|ZP_02064264.1| hypothetical protein BACOVA_01230 [Bacteroides ovatus ATCC 8483] gi|156111245|gb|EDO12990.1| hypothetical protein BACOVA_01230 [Bacteroides ovatus ATCC 8483] Length = 641 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 130/552 (23%), Positives = 228/552 (41%), Gaps = 71/552 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ ++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAAVIQKGKVLGVTAKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S SN D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGSNLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G F ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGFIYEN 245 Query: 226 QQQLA----FQMKH---FSE----------------------------QNFMTEWHYDQQ 250 LA F MK SE + TE+ ++ Sbjct: 246 GSLLAHSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSKE 305 Query: 251 LSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 L+ + I L E E ++ V L + +IG+SGG+DS L Sbjct: 306 LTLTRKFNSHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVIGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + V D LG ++++ I +P T+ ++ +A K+LG + I D + HF Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHFK 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHNINVHD---VTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRPHQT 478 + + KT V L W +G+ + L + I P ++ + E++ Q Sbjct: 483 SMYGVNASVPKTLVKYLVQWVAVNGMDENSKATLLDIVDTPISPELIPADENGEIK--QK 540 Query: 479 DQESLPPYPILD 490 ++ + PY + D Sbjct: 541 TEDLVGPYELHD 552 >gi|260589318|ref|ZP_05855231.1| glutamine-dependent NAD+ synthetase [Blautia hansenii DSM 20583] gi|260540399|gb|EEX20968.1| glutamine-dependent NAD+ synthetase [Blautia hansenii DSM 20583] Length = 637 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 137/622 (22%), Positives = 252/622 (40%), Gaps = 100/622 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + +E + G +++F EL I+GY DL F ++ +Q Sbjct: 6 IKVAAATPQIEVADCIHNTQEIIKKAKEMSAAGARILVFPELCITGYTCHDLFFNETLLQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L + I VG P + + N+ ++ G I+ + K ++PNY EF+ Sbjct: 66 SAKQQLLVLAEELKGTEGLIFVGLPLEYSGKLYNTAAAINRGEILGIIPKHSIPNYGEFY 125 Query: 125 EKRTFISGYS--------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLKK 165 E R F SG ++F + + ICED+W ++ Sbjct: 126 EARYFTSGRDIEGEIKLGDKMVSFGSKVLFECEEMPQLCVAAEICEDVWTPASPGLFHAM 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R +++ GQ + + +Y G+ +L+F G + Sbjct: 186 AGANVIVNLSASDEIAGKSEYRRDLIKGQSARLLCGYVYATAGNGESTQDLVFGGQNLIC 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD-----------QQLSQWNYMSDDSASTMYI----P 268 + LA Q F E Y +++S W + + ++I P Sbjct: 246 ENGSLLA------EAQLFKNETVYGVLDIQKLRGERRRISTW--LEEKGEKHLHISFHLP 297 Query: 269 LQEEEADYN----------------AC-------VLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++E E N C + L+ ++ ++G+SGG+DS Sbjct: 298 MEETELYNNFEKNPFVPDCDTERAKRCEEILTIQAMGLKKRMEHTKCKSAVLGISGGLDS 357 Query: 306 ALC---AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV- 359 L A A+D +G ++N+ + +P T+ ++ +A K LG + + I V Sbjct: 358 TLALLVTARAMDFMGLDRKNITAVTMPCFGTTDRTYTNACELTKRLGAELLEVDIKKAVL 417 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + + + + EN Q+R R ++M ++N M++ T + SE+++G+ T Sbjct: 418 QHFEDIGHDYNVHD---VTFENAQARERTQVIMDIANQQGGMVIGTGDFSELALGWATYN 474 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---- 475 GD + + KT V L + T L E++ +L+ S EL P Sbjct: 475 GDHMSMYGVNGGVPKTMVRHLV---RHYADTCQEEKLAEIL-RDVLDTPVSPELLPPKEG 530 Query: 476 --HQTDQESLPPYPILD-------------DIIKRIVENEESFINNDQEYNDETVRYVEH 520 Q ++ + PY + D I RI + I ++E + +R Sbjct: 531 EIAQKTEDLVGPYELHDFFLYYMLRFHFSPSKIYRIAKKTFEGIYTEEEIL-KWMRKCYW 589 Query: 521 LLYGSEYKRRQAPVGTKITAKS 542 + ++KR P G K+ + S Sbjct: 590 RFFSQQFKRSCLPDGPKVGSVS 611 >gi|158604989|gb|ABW74802.1| NAD+ synthetase [Campylobacter concisus 13826] Length = 245 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/260 (30%), Positives = 146/260 (56%), Gaps = 27/260 (10%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V SL+D K K+++G+SGGIDSA+ A + A E +++P ++ ++++DA Sbjct: 12 VFSLKD---KTKGKKLLLGVSGGIDSAVVATLCARAKPDE-THALIMPTASSNKENMDDA 67 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + L KY VL I ++N F+ + L G N+ +R+R ++L S+ Sbjct: 68 LNLCEKLNIKYKVLSIEGILNAFYETIDVNLSNLRKG----NLAARVRMSLLYDYSSSIN 123 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 A+++ TSNKSE+ +GYGT++GD++ NP+ +LYK+++F+ A LG Sbjct: 124 ALVIGTSNKSELMLGYGTIFGDLACAINPIGELYKSEIFEFAKH---------LG----- 169 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYV 518 + + ++K+PSA+L Q+D+ + Y ++D+I++ + N+E I +++ + V + Sbjct: 170 VDENFIKKAPSADLWDGQSDEGDIGYSYAVIDEILQNLENNKEQAI---KKFGLKAVLDI 226 Query: 519 EHLLYGSEYKRRQAPVGTKI 538 E+ + + +K RQ P+ KI Sbjct: 227 ENRVVSNRFK-RQMPLIVKI 245 >gi|295691441|ref|YP_003595134.1| NAD+ synthetase [Caulobacter segnis ATCC 21756] gi|295433344|gb|ADG12516.1| NAD+ synthetase [Caulobacter segnis ATCC 21756] Length = 684 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 146/559 (26%), Positives = 230/559 (41%), Gaps = 79/559 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A A + D N EA+ G+ +I+F EL ++GY +DL+ ++ + A Sbjct: 22 RVATAVPKVTLADPVANAQSVLALAREAHDAGVAVIVFPELGLTGYTIDDLLQQEVLLDA 81 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +AI TL + D IVVG P +D + N+ V + G ++ V K LPNY EF+E Sbjct: 82 AEAAIATLAEASRDLSPMIVVGAPLRDAGRLYNTGVAIQGGAVLGVVPKSFLPNYREFYE 141 Query: 126 KRTFISG----------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 +R F G + D ++F+ +GI ICED+W + Sbjct: 142 RRWFTPGAGVTGKTLSLAGQAVPFGTD-VLFKASGPTPFTVGIEICEDVWTPNPPSTAQA 200 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GAE L +L+AS K + R + Q +Y G+ +L +DG Sbjct: 201 LAGAEILLNLSASNITIGKSETRRLLCASQSERAIAAYVYSAAGAGESSTDLAWDGHLDI 260 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD-QQLSQWNYMSDDSASTMYI-------------- 267 + Q LA + FS T D +++ Q M + Sbjct: 261 HEMGQLLA-ETARFSTGPAWTFADIDVERIRQERMRVGSFGDAMALAPPRVPFRVIPFDF 319 Query: 268 ----------------------PLQEEEADYNAC---VLSLRDYVQKNNFHKVIIGLSGG 302 P + E Y A V L ++ + K++IG+SGG Sbjct: 320 QPPAGDLALARGVERFPFTPSDPAKLRENCYEAYNIQVQGLARRLEASGLKKLVIGISGG 379 Query: 303 IDSA---LCAAIAVD--ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS L AA AVD AL +EN+ LP TS ++ +A + KA+G L I Sbjct: 380 LDSTQALLVAAKAVDQLALPRENILAYTLPGFATSDRTKSNAWSLMKAMGVTAAELDIRP 439 Query: 358 LVNHFFS-LMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 L F + EP + EN+Q+ +R + L L+NH+ A+++ T + SE+++G+ Sbjct: 440 AATQMLKDLDHPFGRGEPVYDVTFENVQAGLRTDYLFRLANHNAALVVGTGDLSELALGW 499 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +NP KT + L + G T + IL S EL Sbjct: 500 CTYGVGDHMSHYNPNCGAPKTLIQHLIRFVAHSGDVDA---ATTALLEDILATEISPELV 556 Query: 475 PHQTDQES---LPPYPILD 490 P + Q + + PY + D Sbjct: 557 PGEEVQATESFVGPYALQD 575 >gi|167755431|ref|ZP_02427558.1| hypothetical protein CLORAM_00945 [Clostridium ramosum DSM 1402] gi|167704370|gb|EDS18949.1| hypothetical protein CLORAM_00945 [Clostridium ramosum DSM 1402] Length = 644 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 130/555 (23%), Positives = 225/555 (40%), Gaps = 70/555 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + ++ N EA +++ EL ++GY EDL + + Sbjct: 16 IRVAAGSFETSIANVKNNSENICNLINEAYHNDARVLVLPELCLTGYTCEDLFNQDRLLN 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + T+ + T++ +VG P Q + N ++ G ++A+ K ++PNY EF+ Sbjct: 76 EAKQQLQTIITATNNKDLITIVGLPYQHLNSLYNVAAVIHQGALLALVPKTHIPNYQEFY 135 Query: 125 EKRTF--------ISGYSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F ++ ++ I F D + G+ ICED+W L Sbjct: 136 EARRFEQAPKENTLTNFNGQKIPFGTHYVFASTTNSDFKFGVEICEDLWLPDAPSTKLAL 195 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG----- 218 GA + + +AS K R +V+ Q + + +Y N G+ +++F G Sbjct: 196 NGANLILNPSASNEITTKSDYRRLLVSSQSARLVCGYVYCNAGNGESTTDVVFSGHHIIS 255 Query: 219 -------ASFCFDGQQQLA-FQMKHF-SEQNFMTEW--HYDQQLSQWNYMSDDSASTMYI 267 S FD + +K SE+ MT + +++ + ++ + D +T Y Sbjct: 256 ENGTMIKESRGFDSELIYGDLDLKKLSSERRKMTTFKSYHNYETIYFDSTNIDLNTTYYY 315 Query: 268 ---PLQEEEADYNA--C-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA 315 P D A C L ++ KV+IG+SGG+DS L + A Sbjct: 316 DPHPFVPSNRDLRAKRCKEVFDIQTRGLMQRLKATGIKKVVIGISGGLDSTLALLVCTMA 375 Query: 316 LGKENVQT-----IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL 370 K N T I +P T+ ++ +A + L + I + V F + Q Sbjct: 376 FKKLNYDTKDIIAITMPCFGTTSRTKNNALGLMEELAVTSIEVDITESVRIQFRDIEQ-- 433 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 E + EN+Q+R R ILM +N +++ T + SE+++G+ T GD + Sbjct: 434 DENIHDVTYENVQARTRTEILMNKANQVGGLVIGTGDLSEVALGWSTYNGDHMSMYAVNV 493 Query: 431 DLYKTQVFQLASWRNS--HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ------ES 482 + KT V L + S H G E I IL+ S EL P + DQ + Sbjct: 494 SVPKTLVRYLVDYIASLYH------GEKLETILKDILDTPVSPELLPQENDQIVQKTEDI 547 Query: 483 LPPYPILDDIIKRIV 497 + PY + D I +V Sbjct: 548 VGPYELHDFFIYHMV 562 >gi|325003442|ref|ZP_08124554.1| NAD synthetase [Pseudonocardia sp. P1] Length = 681 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 130/533 (24%), Positives = 228/533 (42%), Gaps = 85/533 (15%) Query: 37 GMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV 96 G+ L++F EL +SGY ED++ + + ++A + TL + T + +VVG P + + V Sbjct: 44 GVGLVVFPELTLSGYSIEDVLLQDTLLEAVERELVTLAAATAELLPVLVVGAPLRHRHRV 103 Query: 97 LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG----------------YSNDPIVF 140 N+ V++ G I+ V K LP Y EF+E+R +G + D ++F Sbjct: 104 YNTAVVIHRGRILGVAPKSYLPTYREFYERRQLAAGDDVRDAMITVGGTAYPFGTD-LLF 162 Query: 141 R--DIRLGIL---ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQI 195 R D+ +L ICED W GA L +L+ SP + ++R + Sbjct: 163 RAEDLPGFVLHAEICEDFWVPVPPSAEAALAGATVLANLSGSPITVGRAEQRRLLCRSAS 222 Query: 196 SHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQL-- 251 S +Y G+ ++ +DG + ++ + LA + + F + D L Sbjct: 223 SRCLAGYVYAAAGEGESTTDVSWDGQTLVYENGELLA-ESERFPDGPRRAVADLDLDLIA 281 Query: 252 --SQWNYMSDDSASTM-------------------------------YIPLQEEEAD--- 275 + DD+ T ++P E + Sbjct: 282 AERRRQGTFDDNRRTHADRTDAFRTVTFRLDPPGHDIGLRRTVERFPFVPADAERLEQDC 341 Query: 276 ---YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLP 327 Y+ V L ++ KV+IG+SGG+DS + AA A+D LG + ++ +P Sbjct: 342 YEAYSIQVSGLEQRLRAIGQPKVVIGVSGGLDSTHALIVAARAMDRLGRPRSDILAFTMP 401 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-FLQEEPS-GIVAENIQSR 385 TS + +A A ++ALG ++ L I + + F + EP + EN+Q+ Sbjct: 402 GFATSDHTRGNAVALSEALGVTFETLDITGTARTMLTEIGHPFGRGEPVYDVTFENVQAG 461 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWR 444 +R + L L+N ++L T + SE+++G+ T GD +N + KT + L W Sbjct: 462 LRTDYLFRLANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNGGVPKTLMQHLIRWV 521 Query: 445 NSH-----GITSGLGPL--TEVIPPSILEKSPSAELRPHQTDQESLPPYPILD 490 S G+++ L + TE+ P E PS + Q+ Q ++ PY + D Sbjct: 522 ISSRQFDDGVSAVLRSVLDTEITP----ELVPSDGTQEVQSSQATVGPYALQD 570 >gi|168181474|ref|ZP_02616138.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum Bf] gi|237793865|ref|YP_002861417.1| NAD synthetase [Clostridium botulinum Ba4 str. 657] gi|182675243|gb|EDT87204.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum Bf] gi|229260685|gb|ACQ51718.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum Ba4 str. 657] Length = 638 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 146/626 (23%), Positives = 248/626 (39%), Gaps = 100/626 (15%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I ++ PV V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I VG P + + N VI+ G I+ + K LPNYSEF+ Sbjct: 68 KTLEGIHNICKYSIDKDVLIAVGAPLLYKNSLYNCAVIIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGY------------SNDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N P ++F D + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQKNIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R +V Q IY + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYIYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM------------- 265 L + K F +N + D ++L ++ + + Sbjct: 248 NGSILK-ENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFKFAIND 306 Query: 266 ------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P EEE +N +L + N K +IG+SGG+DS L Sbjct: 307 IGDFDRPIDKYPFVPSNEEERAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTL 366 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNH 361 + K EN+ TI +P T+ ++ +A + K L + I D + H Sbjct: 367 ALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQH 426 Query: 362 FFSL-MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + +++ + + EN+Q+R R ILM ++N +++ T + SE+++G+ T G Sbjct: 427 FKDIGHDKYIHD----VTYENVQARERTQILMDIANKESGLVIGTGDLSELALGWCTYNG 482 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH---- 476 D ++ + KT V L + + + + I IL+ S EL P Sbjct: 483 DHMSMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEG 538 Query: 477 ---QTDQESLPPYPILD-------------DIIKRI--VENEESFINNDQEYNDETVRYV 518 Q ++ + PY + D D IK++ + ++S+ D+E D+ Y Sbjct: 539 NIAQKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSY---DKETIDKWFSYF 595 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFG 544 + ++KR P G K+ S Sbjct: 596 IRRFFTQQFKRSAVPDGPKVGTISLS 621 >gi|325967954|ref|YP_004244146.1| NAD+ synthetase [Vulcanisaeta moutnovskia 768-28] gi|323707157|gb|ADY00644.1| NAD+ synthetase [Vulcanisaeta moutnovskia 768-28] Length = 289 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 139/277 (50%), Gaps = 26/277 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R YV+ + IIGLSGG+DS++ A + V ALGK+NV ++LPYK T P+ + DA Sbjct: 25 IRSYVKDSGATGAIIGLSGGVDSSVTAYLLVKALGKDNVIGLILPYKTTPPEDIRDAKYV 84 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ L KY + I + N F + F +E I N+ RIR IL +N ++ Sbjct: 85 AENLEIKYYYIDIGKIRNAFVESIPVF--DESDKIATGNLLPRIRMTILYYFANRFNKVV 142 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + T +KSE+ +GY T YGD P+ DLYKTQV L + LG +P Sbjct: 143 VGTGDKSELLIGYFTKYGDGGVDILPIGDLYKTQVRYLGKY---------LG-----LPD 188 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYND-----ETVR 516 SI K S L QT + L Y +D I+ +++ +N +Q E V+ Sbjct: 189 SIAFKPSSPRLWEDQTAEGELGVKYEDIDVILHALIDYR---MNTEQAAEATGKPIELVQ 245 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 V + +E+KR+ P+ +I+ ++ G D P++ Sbjct: 246 TVWRRVLNTEHKRKM-PIVPRISMRTLGIDWRMPVNK 281 >gi|260171023|ref|ZP_05757435.1| NAD synthetase [Bacteroides sp. D2] gi|315919343|ref|ZP_07915583.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D2] gi|313693218|gb|EFS30053.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D2] Length = 641 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 130/552 (23%), Positives = 228/552 (41%), Gaps = 71/552 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ ++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAAVIQKGKVLGVTAKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S SN D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGSNLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G F ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGFIYEN 245 Query: 226 QQQLA----FQMKH---FSE----------------------------QNFMTEWHYDQQ 250 LA F MK SE + TE+ ++ Sbjct: 246 GSLLAHSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSKE 305 Query: 251 LSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 L+ + I L E E ++ V L + +IG+SGG+DS L Sbjct: 306 LTLTRKFNSHPFVPQGIELNEHCEEVFSIQVAGLAQRLIHTGAKTAVIGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + V D LG ++++ I +P T+ ++ +A K+LG + I D + HF Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHFK 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHNINVHD---VTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRPHQT 478 + + KT V L W +G+ + L + I P ++ + E++ Q Sbjct: 483 SMYGVNASVPKTLVKYLVQWVAVNGMDENSKATLLDIVDTPISPELIPADENGEIK--QK 540 Query: 479 DQESLPPYPILD 490 ++ + PY + D Sbjct: 541 TEDLVGPYELHD 552 >gi|57641733|ref|YP_184211.1| NAD synthetase [Thermococcus kodakarensis KOD1] gi|73921198|sp|Q5JJ65|NADE_PYRKO RecName: Full=NH(3)-dependent NAD(+) synthetase gi|57160057|dbj|BAD85987.1| NH3-dependent NAD+ synthetase [Thermococcus kodakarensis KOD1] Length = 254 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 93/268 (34%), Positives = 147/268 (54%), Gaps = 28/268 (10%) Query: 275 DYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 DY A + ++ ++ +++ +IG+SGGIDSA A +A A+G ENV +++PY Sbjct: 5 DYRAAIETITSFLSEKLEESGSGGFVIGISGGIDSATAAYLAAKAVGTENVLGLIMPYYE 64 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + +EDA ++LG Y+V+ I +V F S + +P NI SR R + Sbjct: 65 NN--DVEDAKLVCESLGIDYEVINIKPIVESFVSQLGF----QPDKRSLGNIMSRTRMIL 118 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L A +N ++L TSN+SE GY T +GD + + PL +LYKT+V+++A Sbjct: 119 LYAHANQLNRLVLGTSNRSEFLTGYFTKWGDGASDYAPLINLYKTEVWEIAKL------- 171 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE--ESFINND 507 LG +P I++K P+A L QTD++ L Y +LD+I+ R+V+ + + I + Sbjct: 172 --LG-----VPGRIIQKKPTAGLWEGQTDEDELGISYRLLDEILWRLVDLKMPKEKIVEE 224 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPVG 535 + E V YVE L+ SE+KRR PVG Sbjct: 225 LGISVEKVEYVEGLVRRSEHKRR-LPVG 251 >gi|227872480|ref|ZP_03990820.1| NAD(+) synthase (glutamine-hydrolyzing) [Oribacterium sinus F0268] gi|227841681|gb|EEJ51971.1| NAD(+) synthase (glutamine-hydrolyzing) [Oribacterium sinus F0268] Length = 656 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 116/498 (23%), Positives = 212/498 (42%), Gaps = 71/498 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N+ + +A + + L+++ EL ++ Y D+++++S ++ Sbjct: 5 VRVATACPKGRVADPEYNLEQMLILARKAEEENVSLLVYPELCLTSYTAMDMIYQRSLLE 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + T + V+G+ + + N+ V+ G+I+ + K +PN++EF+ Sbjct: 65 AGEKALISFCEQTKEMDVLFVIGYGLLLEGKLFNTGVVTYHGDILGIVPKQFIPNHAEFY 124 Query: 125 EKRTFISGYSNDPIVF---------------------------RDIRLGILICEDIWKNS 157 E+R F G + + F + RL + ICED+W Sbjct: 125 ERRYFQEG--KEEVCFIPNILKGEGYRKEIPFGASLHFVREEDQRFRLAVEICEDLWVPV 182 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELI 215 GA L + +AS K R ++ ++H +Y + + +++ Sbjct: 183 PPSSKHALAGATLLANCSASDELVGKRGSRRRLLEHYSGNLHASYLYSSAGPSESTQDMV 242 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY----DQQLSQWNYMSDDSAS-TMYIPLQ 270 F + + L + + F E F + + +++ Q Y + S T Y ++ Sbjct: 243 FSAHCLISENGRILK-ENQPFEEGIFWADVNLALLEGERMRQSTYFVKEEPSYTQYFSMK 301 Query: 271 --------------------EEEADYNACVLS-----LRDYVQKNNFHKVIIGLSGGIDS 305 E+E D +LS L+ ++ K+I+GLSGG+DS Sbjct: 302 DKQYTLHRFVSPCPFLPKAVEKEGDRAREILSIQSRGLKKRMEHVGCKKLILGLSGGLDS 361 Query: 306 ALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV- 359 L + ++ KEN+ I +P TS ++ + A AKALG + I V Sbjct: 362 TLALFVCLETFALLGYDKENILCITMPSFGTSKKTHDSAEKLAKALGISLREISIEKAVL 421 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HFF + E IV EN Q+R R ILM L+N A+L+ T + SE+++G+ T Sbjct: 422 QHFFDIGH---DGEKKDIVYENAQARERTQILMDLANKEGALLVGTGDLSELALGFATYN 478 Query: 420 GDMSGGFNPLKDLYKTQV 437 GD + D+ KT + Sbjct: 479 GDHMSMYGVNGDIPKTAI 496 >gi|323138562|ref|ZP_08073630.1| NAD+ synthetase [Methylocystis sp. ATCC 49242] gi|322396196|gb|EFX98729.1| NAD+ synthetase [Methylocystis sp. ATCC 49242] Length = 683 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 136/564 (24%), Positives = 237/564 (42%), Gaps = 86/564 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D A N+A+ EA+++G LILF EL +S Y +DL+ + + + Sbjct: 14 IRAAVACPRVRVADPAFNVARTIEMAREADQRGASLILFPELGLSAYAIDDLLQQDALLA 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ L + IVVG P + + + N + + G ++AV KI LPNY EF+ Sbjct: 74 AVEAALRELIEVSRALHPLIVVGAPLRHRGRLYNCAIAILRGRVLAVTPKIYLPNYREFY 133 Query: 125 EKRTFISG----------------YSNDPIV----FRDIRLGILICEDIWKNSNICKHLK 164 E+R F SG + +D ++ F ++ + + +CED+W Sbjct: 134 ERRHFASGAFVAGEEISVAGQIAPFGSDVLLEAGDFDNLVVHMEVCEDVWVPIPPSSRAA 193 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGAS 220 GA L +L+AS K R + + +Y GQ E L +DG + Sbjct: 194 LAGATVLLNLSASNAIVGKSDHRQILCAAHSARCLSAYLY--SAAGQGESTTDLAWDGEA 251 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYD---------QQLSQWNYMSDDSASTMYIPLQE 271 + Q LA + FS++ + D +Q++ + ++ +T + ++ Sbjct: 252 MIHENGQLLA-KAPRFSDEPQLVLADIDLGRLVAERARQVTFGDCADVEAGATQFRRVEF 310 Query: 272 EEA--------------------------------DYNACVLSLRDYVQKNNFHKVIIGL 299 E A +N L ++ KV+IG+ Sbjct: 311 ELAAPRDRDLGFMRDVPRFPFVPNDETRLAELCFEAFNIQSHGLEQRLRATRMQKVVIGV 370 Query: 300 SGGIDSALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS +AV A+G +EN+ LP T+ ++ +A +ALG + Sbjct: 371 SGGLDSTHALLVAVTAMGRLGLPRENILGYTLPAFATTDRTKSNAWRLMQALGVSAQEID 430 Query: 355 IHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + S + + EE EN+Q+ R ++L L+N A+++ T + SE++ Sbjct: 431 VSAACTQMLSDIGHPVARGEEIYDATYENVQAGARTSLLFRLANQHDAIVIGTGDLSELA 490 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW--RNSHGITSGLGPLTEVIPPSILEKSP 469 +G+ T GD +N + KT + L W R++ G T + +L Sbjct: 491 LGWCTYGVGDQMSHYNVNASVPKTLIQHLIRWCARDAR-----FGAETVAVLEDVLATEI 545 Query: 470 SAELRPHQTDQES---LPPYPILD 490 S EL P +T Q + + PY + D Sbjct: 546 SPELIPGETAQRTEAFVGPYALQD 569 >gi|302381441|ref|YP_003817264.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Brevundimonas subvibrioides ATCC 15264] gi|302192069|gb|ADK99640.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Brevundimonas subvibrioides ATCC 15264] Length = 681 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 136/562 (24%), Positives = 228/562 (40%), Gaps = 83/562 (14%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A PVV D A N + +A QG DLI+F EL +SGY +DL + + + Sbjct: 16 VRVAAATPVVHIADPAANAEEHVALIRQAGAQGCDLIVFPELSLSGYAIDDLHMQAALLA 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L + G VVG P + + +LN+ V+L G + V K LPNY E++ Sbjct: 76 EVDRQIGHLARVAGEAGLVAVVGAPVRHGDRLLNTAVVLAGGEVTGVVPKTYLPNYREYY 135 Query: 125 EKRTFISG---------------YSNDPIVFR-DIR----LGILICEDIWKNSNICKHLK 164 EKR F SG + ++F D R +G+ ICED W Sbjct: 136 EKRWFSSGDDIGAETLRIGGQDSWVGTRLLFEADDRPGFVVGVEICEDFWAPVPPSTRQA 195 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K +R + + Q + ++ G+ +L +DG + Sbjct: 196 LAGARILLNLSASNIVIGKADERAMLCSSQSARTLSAYVFTASGWGESTTDLAWDGQATI 255 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD-------------------QQLSQWNYM-----S 258 + +LA + F+ ++ +T D ++L + Y+ + Sbjct: 256 HELGAKLA-SGERFALESHLTVADIDIERIGQDRLRNGTFADCARRELDEEGYIRLGFRT 314 Query: 259 DDSASTM----------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGG 302 D+A ++P D +N V L + ++ IG+SGG Sbjct: 315 RDAAPAGPLIRPLDRFPFVPDDPARLDQDCFEAFNIQVQGLMRRMTATGAERLCIGVSGG 374 Query: 303 IDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A L + N+ +P TS + +A A ALG + I Sbjct: 375 LDSTQALLVACRAFDRLNLPRTNILGFTMPGFATSDGTKSNAWALMTALGVTGAEIDIRP 434 Query: 358 LVNHFFS-LMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + + +P I EN+Q+ +R + L L+N ++A +L T + SE+++G+ Sbjct: 435 AAERMLADIKHPYADGQPVHDITFENVQAGLRTDYLFRLANQNRAFVLGTGDLSELALGW 494 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W G + +IL+ S EL Sbjct: 495 ATYGVGDHMSHYNVNGGVAKTLIRHLIRWVADREPDGGAADVLY----AILDTEISPELV 550 Query: 475 PH------QTDQESLPPYPILD 490 P Q+ + ++ PY + D Sbjct: 551 PAGADGQIQSTEATVGPYALND 572 >gi|313836422|gb|EFS74136.1| NAD+ synthetase [Propionibacterium acnes HL037PA2] gi|314929035|gb|EFS92866.1| NAD+ synthetase [Propionibacterium acnes HL044PA1] gi|314971017|gb|EFT15115.1| NAD+ synthetase [Propionibacterium acnes HL037PA3] gi|328906681|gb|EGG26456.1| NAD synthetase [Propionibacterium sp. P08] Length = 689 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 132/570 (23%), Positives = 228/570 (40%), Gaps = 91/570 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +IA +GD N E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RIAACTTPVHIGDPGSNAGGILDTCRELDSRNVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+ L+ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIEALRQASRGLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYSNDPIV---------------------------FRDIRLGILICEDIWKNSN 158 KR F +G + D+ + +CED+W + Sbjct: 135 KRHFAAGADTTGTIDLSGRQKSHAASTEVPFGADQLFQATDLPDLIFHVEVCEDLWVPVS 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP + ++RHE+ S +Y G+ +L + Sbjct: 195 PSSRAALAGAVVEVNLSGSPITVGRSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----QQLSQWNYMSDDSA--------- 262 DG + ++ L + E F + + D ++L Q ++ DD+A Sbjct: 255 DGQTMIYENGSLLTATDRFSPEPGFCLADIDLDLLRQERLRQGSF--DDNALAQPAEAPW 312 Query: 263 -STMY-----------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKV 295 +T + P + D YN V LR ++ ++ Sbjct: 313 RTTAFTLDPPHDDIGLERPVNRFPFVPHDPDQLAQDCYEAYNIQVYGLRRRLESIGSPRI 372 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L AA A+D +G + ++ +P T+ + +A ALG Sbjct: 373 VIGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTNHTKNNALDLCHALGIPC 432 Query: 351 DVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +VL I M + E + EN+Q+ +R + L ++N ++L T + Sbjct: 433 EVLDIRPAATQMLKGMGHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDL 492 Query: 409 SEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILE 466 SE+++G+ T GD + + KT + L W I+SG T V+ S+L Sbjct: 493 SELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRW----CISSGQFNEATNVVLESVLG 548 Query: 467 KSPSAELRPH------QTDQESLPPYPILD 490 S EL P Q+ Q + PY + D Sbjct: 549 TEISPELVPARPGEKIQSTQAKIGPYELQD 578 >gi|260912484|ref|ZP_05919020.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633403|gb|EEX51557.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 647 Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 116/478 (24%), Positives = 203/478 (42%), Gaps = 64/478 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + AN QG ++++F EL I+GY +DL ++ I+ Sbjct: 6 IKVAAAIPAVKVADCHFNAEQTEQQIRLANEQGAEIVVFPELGITGYTCQDLFTQQLLIE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L T VVG P +LN V+ G I+ + K LPNYSEF+ Sbjct: 66 QAEQAVGSLLEKTQTLDIIAVVGVPVAVDSILLNCAVVFQRGRILGIVPKTYLPNYSEFY 125 Query: 125 EKRTFISGYS-NDP------------------IVFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F S + ND + ++ G+ ICED+W + +L Sbjct: 126 EKRWFASTHHLNDTSILYAGQQTLLTAQSQIFVTADGVKFGVEICEDVWAPNPPGTYLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ + +L+AS K ++ Q + +Y G+ ++++ G + + Sbjct: 186 AGADIVCNLSASDELIGKHTYLKSLLAQQSARTMAGYVYSGCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM------------ 265 + + L Q K F + + D ++ + Y++ T Sbjct: 246 ENGKLLT-QSKRFDFEPQIVISEIDIFKLRAERRTNSTYVNAQHGHTALLHTAQEPLINK 304 Query: 266 ------------YIPLQEEEAD-----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E+ D +N V L ++ + KV++G+SGG+DS L Sbjct: 305 PFNLQRTIDPLPFVPQDEQMHDSCEEIFNIQVSGLAQRLKHIHASKVVLGISGGLDSTLA 364 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V D LG +E + + +P T+ ++ ++A + LG + I V F Sbjct: 365 LLVCVRTFDKLGLPREGIIGVTMPGFGTTNRTYQNAINLMRELGITIREISIAKSVTQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + + +V EN Q+R R ILM L N +++ T + SE+++G+ T GD Sbjct: 425 EDIGHDIAVH--DVVYENGQARERTQILMDLGNKLGGIVVGTGDLSELALGWATYNGD 480 >gi|302334987|ref|YP_003800194.1| NAD+ synthetase [Olsenella uli DSM 7084] gi|301318827|gb|ADK67314.1| NAD+ synthetase [Olsenella uli DSM 7084] Length = 648 Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 142/619 (22%), Positives = 250/619 (40%), Gaps = 92/619 (14%) Query: 5 LKIAIAQLNPVVGDIAGNI-AKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +K+A V D+ N+ A A + G L++ EL ++GY EDL ++ + Sbjct: 6 VKVAARSPKVSVADVHANVDACVAEAADAVRSDGAKLVVLPELCVTGYTCEDLFWQDELL 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + TL T A ++VG P + + + N L G ++ + K N+PNY+EF Sbjct: 66 DAAERGLRTLAERTTVLDALVLVGIPARVNDKLYNCAAALAHGELLGLVPKRNIPNYNEF 125 Query: 124 HEKRTFISG-----------YSNDPI---------VFRDIRLGILICEDIWKNSNICKHL 163 +E R F +G + N P +++ + +CED+W S Sbjct: 126 YEARHFAAGPTDVSHVRFADWENIPFGTSQLFACSTLLQLKVAVEVCEDLWVASPPSIAH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 + GA + +L+AS K R E+V GQ + + +Y + G+ +L+F Sbjct: 186 AQAGATVICNLSASNAVVGKADYRRELVVGQSARLVSAYVYASAGWGESTQDLVFSAHDL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQ----------------------QLSQWNYMSD 259 + LA Q F E TE +++ ++ + Sbjct: 246 IAENGVLLA-QASPFGEAAVTTEIDVASLSAERRRLSTFGCTPTAQDAGYEVTTFSLATA 304 Query: 260 DSASTM------YIPLQ-EEEADYNACVLSLRDY-VQKNNFHK----VIIGLSGGIDSAL 307 D+ T ++P A+ VLS++ + + K H ++G+SGG+DS L Sbjct: 305 DTRLTRRVDPHPFVPANPARRAERCEDVLSIQSHGLAKRLSHTRSDCAVVGVSGGLDSTL 364 Query: 308 C---AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 A A D LG + + + +P T+ ++ +A A LG + I V Sbjct: 365 ALLVCARAFDILGLDRSGILAVTMPGFGTTDRTHGNATVLADTLGATLREVDITTAVLQH 424 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 FS + E + EN Q+R R +LM ++N +++ T + SE+++G+ T D Sbjct: 425 FSDIGH--DESDHSVTYENAQARERMQVLMDMANQEGGLVVGTGDLSELALGWATYNADH 482 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------- 475 + + KT V L R IT+ G L+ V+ +L+ S EL P Sbjct: 483 MSMYGVNAGIPKTLVRHLV--RYVADITASDG-LSRVL-LDVLDTPVSPELLPATAHGTI 538 Query: 476 HQTDQESLPPYPILD----DIIKRIVENEESFI--------NNDQEYNDETV----RYVE 519 Q ++ + PY + D +++R + + Y+D T+ R Sbjct: 539 SQRTEDLVGPYELHDFFLYQVLRRGFAPRKVYRLARYALGEGTAAGYDDATILKWLRTFY 598 Query: 520 HLLYGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 599 RRFFSQQFKRSCLPDGPKV 617 >gi|148252556|ref|YP_001237141.1| NAD synthetase [Bradyrhizobium sp. BTAi1] gi|146404729|gb|ABQ33235.1| Glutamine-dependent NAD(+) synthetase [Bradyrhizobium sp. BTAi1] Length = 678 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 129/528 (24%), Positives = 210/528 (39%), Gaps = 74/528 (14%) Query: 36 QGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG 95 QG + +F EL +SGY +DLV + + A + TL +HD ++VG P + Sbjct: 43 QGAAVAVFPELCLSGYAIDDLVKQDPLLDAVQRGLLTLVEASHDLTPVLIVGAPLRFSHR 102 Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG----------------YSNDPIV 139 V N V++ G ++ V KI LP Y EF+E R F SG + D + Sbjct: 103 VYNCAVVIHRGEVLGVVPKIYLPTYREFYEGRHFASGAGIRGEMIEVAETMAPFGTDLLF 162 Query: 140 ----FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQI 195 + +G+ +CED+W L GA L +L+ SP + + R + Sbjct: 163 AAADVAGLVIGVEVCEDMWIPVTPASELALAGATVLANLSGSPITVGRAESRSLLCRSTS 222 Query: 196 SHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSE--QNFMTEWHYDQQL 251 + IY G+ +L +DG + F+ LA + + F + Q + D Sbjct: 223 ARCLAAYIYAAAGVGESTTDLAWDGQTSIFENGVLLA-ESERFRQTGQTIFADVDLDLLR 281 Query: 252 SQWNYMS--DDSASTM------------------------------YIPLQEEEAD---- 275 + M DD+A ++P D Sbjct: 282 QERALMGTFDDNARAQTRGEHYRRIGFELQPTKDDIGFMRSIERFPFVPSDAARLDQDCY 341 Query: 276 --YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPY 328 YN V L ++ +++IG+SGG+DS + AA A+D LG + N+ +P Sbjct: 342 EAYNIQVAGLTQRLRATGTKRIVIGVSGGLDSTHALIVAAKAMDLLGLPRTNILAYTMPG 401 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRI 386 T QS A A KAL L I + E + EN+Q+ + Sbjct: 402 FATGAQSKSYAHALMKALEVSAAELDIRPAATQMLKDIGHPFGRGEAVYDVTFENVQAGL 461 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWR- 444 R + L L+N ++L T + SE+++G+ T GD +N + KT + L W Sbjct: 462 RTDYLFRLANDRGGLVLGTGDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVI 521 Query: 445 NSHGITSGLGPLTEVIPPSIL--EKSPSAELRPHQTDQESLPPYPILD 490 SH ++ + E + + + E P E Q+ Q ++ PY + D Sbjct: 522 ASHQFSADVDRTLEAVLAAEISPELVPVKEGETPQSTQAAIGPYELQD 569 >gi|281423268|ref|ZP_06254181.1| glutamine-dependent NAD+ synthetase [Prevotella oris F0302] gi|281402604|gb|EFB33435.1| glutamine-dependent NAD+ synthetase [Prevotella oris F0302] Length = 642 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 138/623 (22%), Positives = 253/623 (40%), Gaps = 94/623 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + +A +G+++++F EL I+GY +DL + + Sbjct: 6 IKVASAIPSVKVGDVKYNTLQIENLIVQAESRGVEIVVFPELSITGYTCQDLFRQTLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ L + +VG P +LN ++L G I+ + K LPNY+EF+ Sbjct: 66 ATDTAVMMLLDFSRKLNVISIVGAPILVGNLLLNCALVLQQGEILGIIPKTYLPNYNEFY 125 Query: 125 EKRTFISG----------------YSNDPIVF---RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S S DP +F + ++ G+ ICED+W L Sbjct: 126 EKRWFASSQDLRPTEIRYAGHKLLVSADPKLFVTSQGVKFGVEICEDVWAPIPPSNRLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV---------NQVGGQDELIF 216 GA+ +F+L+A+ K K ++ Q + + +Y + V G + LI+ Sbjct: 186 SGADIIFNLSATNELIGKHKYLKSLLAQQSARMMSGYVYSSCGFGESTQDVVYGGNALIY 245 Query: 217 DGASFCFDGQQ----------QLAFQMKHFSEQNFMTEWHYDQQ-----LSQWNYMSDDS 261 + +G++ Q+ + N T + +Q W + D Sbjct: 246 ENGVLLAEGERFSLTPQLVVSQIDVERLRVERSNNTTFVNAQRQGIMNGSEVWCHGIDAK 305 Query: 262 ASTM---------YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 +IP + E +N VL L + V++G+SGG+DS L Sbjct: 306 TDFCLERTIDPCPFIPQDDGLTTSCEEIFNIQVLGLAKRLVHTGCKHVVLGISGGLDSTL 365 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + + K + + + +P T+ ++ ++A ++L +PI V Sbjct: 366 ALLVCIRTFDKLQMDRKGIIGVTMPGFGTTDRTYQNAIQLMESLNITIREIPIAKSVTQH 425 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + + + EN Q+R R ILM LSN M++ T + SE+++G+ T GD Sbjct: 426 FEDIGHDMTIH--DVTYENGQARERTQILMDLSNQVGGMVIGTGDLSELALGWATYNGDH 483 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 + + KT + L + + + + I I++ S EL P Sbjct: 484 MSMYGVNASVPKTLIQYLMRY-----VATTMSSRVSDILMDIIDTPISPELIPADAGNTI 538 Query: 477 -QTDQESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETVR----YVEH 520 Q ++ + PY + D + K + +++F + Y+DE ++ Sbjct: 539 CQKTEDLVGPYELHDFFLYYFLRFGFRPRKIFMLAQKAFAGH---YDDEVIKKWLTTFCR 595 Query: 521 LLYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ + S Sbjct: 596 RFFSQQFKRSCLPDGPKVGSVSL 618 >gi|254417780|ref|ZP_05031504.1| hydrolase, carbon-nitrogen family [Brevundimonas sp. BAL3] gi|196183957|gb|EDX78933.1| hydrolase, carbon-nitrogen family [Brevundimonas sp. BAL3] Length = 681 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 133/561 (23%), Positives = 225/561 (40%), Gaps = 83/561 (14%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A PV VGD N + +A QG+DL++F EL +S Y +DL + + + Sbjct: 16 VRVAAATPVSHVGDPKANAEEHLALIRQAADQGVDLMVFPELSLSAYAIDDLHMQAALLD 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + T + VVG P ++ + + N V++ AG ++ V K LPNY E++ Sbjct: 76 EVERQIAVIAQATGEHDLVAVVGAPIRNGDALYNCAVVMGAGEVLGVVPKTYLPNYREYY 135 Query: 125 EKRTFISGYSNDPIVFR------DIRLGIL--------------ICEDIWKNSNICKHLK 164 EKR F + V R D G++ ICED W Sbjct: 136 EKRWFAPATARAEDVIRLNGETVDFAPGLVFEAVNRPGFVFAVEICEDYWAPLPPSTRAA 195 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K +R + + ++ G+ +L +DG + Sbjct: 196 LAGARILLNLSASNIVIGKADERAMLSASHSARTLSAYVFTASGWGESTTDLAWDGQATI 255 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD-----------QQLSQWNYMSDDSASTM------ 265 + +LA + + F+ +N +T D S+ + + A+ + Sbjct: 256 HELGSKLA-EGERFALENHLTLADVDVDRIGLDRLRNGTFSECARVEGEPATVVPFMARE 314 Query: 266 ---------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGID 304 ++P + D +N V L + N +++IG+SGG+D Sbjct: 315 DVVESELIRPLDRFPFVPDEAGRLDQDCYEAFNIQVQGLMRRMTATNGERLVIGVSGGLD 374 Query: 305 SALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S +A A L + N+ +P TS + +A A KALG + I Sbjct: 375 STQALLVACRAFDRLNLPRTNILGFTMPGFATSDGTKSNAWALMKALGVTGAEIDIRPAA 434 Query: 360 NHFFSLMSQ-FLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F + + EP I EN+Q+ +R + L L+N ++A +L T + SE+++G+ T Sbjct: 435 EQMFKDIGHPYAAGEPVHDITFENVQAGLRTDYLFRLANQNRAFVLGTGDLSELALGWAT 494 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP--SILEKSPSAELR 474 GD +N + KT + L W + E P +IL S EL Sbjct: 495 YGVGDHMSHYNVNGGVAKTLIRHLIRWVADRELVG-----AEASPTLHAILNTEISPELV 549 Query: 475 PH-----QTDQESLPPYPILD 490 P Q+ + ++ PY + D Sbjct: 550 PAKDGVIQSTEGTVGPYALND 570 >gi|110347015|ref|YP_665833.1| NAD synthetase [Mesorhizobium sp. BNC1] gi|110283126|gb|ABG61186.1| NAD+ synthase [Chelativorans sp. BNC1] Length = 681 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 152/645 (23%), Positives = 269/645 (41%), Gaps = 116/645 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A V D N+A+ + RQG+ L++F EL + Y +D++ + + +Q Sbjct: 12 IRVAACTPKCEVADPGYNVAETVALARDGARQGVALMVFPELGLCAYAIDDILGQAALLQ 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AI+ + + + + +++G P + + N V++ G I+ V K +LPNY EF+ Sbjct: 72 RVEQAIEEIAAASAELSPVLLIGAPLAREGRLYNCAVVIHRGRILGVVPKGHLPNYREFY 131 Query: 125 EKRTFIS---------GYSNDPIVF-RDIRLG----------ILICEDIWKNSNICKHLK 164 EKR F S G + P+ F D+ + +CED+W + Sbjct: 132 EKRWFASGRNLKRATIGIAGQPVPFGMDLIFAAEDLPGFVFHVELCEDLWGPAPPSDFAA 191 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS-- 220 GA L +L+AS K + R + Q + IY G+ +L +DG + Sbjct: 192 LAGALILANLSASSITVGKAETRRLLCATQSARCWAAYIYSAAGPGESTTDLAWDGQACI 251 Query: 221 ------------FCFDGQQQLA------------------------------FQMKHFSE 238 F D Q +A F+ F Sbjct: 252 YELGLLLAETERFPLDSQMAIADVDVERLTLERLRTGTFNEAAIAQNMPEDRFRRIGFQF 311 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + MT+ + ++++ Y DSA Q+ Y+ V L +Q +V IG Sbjct: 312 EPPMTDLGLRRIVARFPYAPADSARLD----QDCYEAYSIQVQGLMKRLQATGIRRVCIG 367 Query: 299 LSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS + AA A D LG + ++ +P T + ++A A ++LG + + Sbjct: 368 VSGGLDSTHALIVAAKAFDRLGWQRSDILGFTMPGFATGDATKDNAWALMRSLGVTAEEI 427 Query: 354 PIHDLVNHFFS-LMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I L + L F + E + EN+Q+ +R +IL +N A++L T + SEI Sbjct: 428 DIKPLAQQMLAGLRHPFAKGEMVYDVTFENVQAGLRTDILFRAANQRGAIVLGTGDLSEI 487 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW-RNSHGITSG-----LGPLTEVIPPSI 464 ++G+ T GD +N + KT + L W S+ +G L L VI P + Sbjct: 488 ALGWSTYGVGDQMSHYNVNASVPKTLIQHLIRWVAQSNAFDAGTNATLLSILDTVISPEL 547 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE-----NEESFI--------------- 504 + P+ E P Q+ +E + PY + D + + ++ +F+ Sbjct: 548 I---PADEGGPSQSTEEKIGPYELQDFTLFYLTRYGLKPSKIAFLAFHAWRDIAAGAWPP 604 Query: 505 ----NNDQEYNDETVR-YVEHLLYG----SEYKRRQAPVGTKITA 540 + + Y+ T++ ++E LY S++KR +P G K+TA Sbjct: 605 QYPDDRRRAYDLPTIKSWMEVFLYRFFTISQFKRSASPNGPKVTA 649 >gi|168177897|ref|ZP_02612561.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum NCTC 2916] gi|226947789|ref|YP_002802880.1| NAD synthetase [Clostridium botulinum A2 str. Kyoto] gi|182670412|gb|EDT82386.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum NCTC 2916] gi|226841373|gb|ACO84039.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A2 str. Kyoto] Length = 638 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 141/623 (22%), Positives = 248/623 (39%), Gaps = 96/623 (15%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I ++ PV V DI NI ++ + + LI+F EL I+ Y +L ++ I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQRLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I +G P + + N V++ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAIGAPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N P ++F D + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM------------- 265 L + K F +N + D ++L ++ + + Sbjct: 248 NGSILK-ENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAIND 306 Query: 266 ------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P EE+ +N +L + N K +IG+SGG+DS L Sbjct: 307 VGDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTL 366 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + K EN+ TI +P T+ ++ +A + K L + I D Sbjct: 367 ALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQH 426 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 427 FKDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDH 484 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 ++ + KT V L + + + ++E++ IL+ S EL P Sbjct: 485 MSMYSVNCSIPKTLVRYLVRYVAENEVAK---EISEIL-IDILDTPVSPELLPKDKEGNI 540 Query: 477 -QTDQESLPPYPILD-------------DIIKRI--VENEESFINNDQEYNDETVRYVEH 520 Q ++ + PY + D D IK++ + ++S+ D+E D+ Y Sbjct: 541 VQKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSY---DKETIDKWFSYFIR 597 Query: 521 LLYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ S Sbjct: 598 RFFTQQFKRSAVPDGPKVGTISL 620 >gi|294496566|ref|YP_003543059.1| NH(3)-dependent NAD(+) synthetase [Methanohalophilus mahii DSM 5219] gi|292667565|gb|ADE37414.1| NH(3)-dependent NAD(+) synthetase [Methanohalophilus mahii DSM 5219] Length = 260 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 120/228 (52%), Gaps = 18/228 (7%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP-YKYTSPQS 335 N V +R+ + ++G+SGG+DSAL A +AV+ALG ENV + LP T P+ Sbjct: 8 NRIVDFIREKCEDAGVTGSVVGISGGVDSALVAHLAVEALGAENVLGLHLPELNVTPPED 67 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 + A A LG ++ + I +V + + M + + V N+++RIR +IL + Sbjct: 68 VLHATEVANGLGIEFRTIEIGGIVQTYLANMPG--SDPANKYVNGNLKARIRMSILYYYA 125 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N ++ T NK+EI +GY T YGD P+ DLYKT+VFQ+A Sbjct: 126 NLDSRLVAGTGNKTEILLGYYTKYGDGGVDLEPIGDLYKTEVFQMAEMTG---------- 175 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES 502 +P I++KSPSA L QTD++ L Y +D I+ +++ EE+ Sbjct: 176 ----VPGEIIDKSPSAALWEGQTDEKELGHSYATIDSILIKMLAGEEA 219 >gi|295093434|emb|CBK82525.1| NH(3)-dependent NAD(+) synthetase [Coprococcus sp. ART55/1] Length = 663 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 141/652 (21%), Positives = 261/652 (40%), Gaps = 118/652 (18%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L++A +G ++GN+ + EE + D+I+ EL I+GY DL + Sbjct: 1 MKNMLRVAAVTPKVHIGSVSGNVREIMDIYEEY-KDAADVIVTPELSITGYTCADLFENR 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I + L T G + +VVG P + + N L G ++A+ K LPNY Sbjct: 60 KLIDGARRGLLQLAMATCTGQSALVVGLPFEVDGELFNCAAFLQGGRVVAIVPKTYLPNY 119 Query: 121 SEFHEKRTFISGYSN-------DP------------------------IVF--------- 140 EF+EKR F + + DP ++F Sbjct: 120 GEFYEKRWFSARKYDAVMVNLMDPEDDGDELEYNAGSKKAGDRAVGSEVLFGNNVMIEMG 179 Query: 141 ---RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 + ++LGI ICED W + + L GAE + +L+AS K RH+++ S Sbjct: 180 SGDQRVKLGIEICEDAWTPVSPGRLLAMAGAEVILNLSASNEVIGKAAYRHKLIGSVSSD 239 Query: 198 VHLPIIYVN--QVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF-----MTEWHYDQ- 249 +YV+ +L+F G + ++ + L ++K F + +T+ +D+ Sbjct: 240 CLCGYVYVSAGMYESTSDLVFSGHNLMYENGKLLG-EVKPFEDGVLIRDISLTKIRHDRI 298 Query: 250 ------------QLSQWNYMSDDS------------ASTMYIP----LQEEEADYNACVL 281 ++ + D+ T ++P L+ A + V Sbjct: 299 ANKSFADCKRDFAFRKYETVVCDTPLMDKGNVLMKVKMTPFVPSGNKLERCMAIFKMQVA 358 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSL 336 L+ ++ + V++G+SGG+DS L ++ A L V I +P T+ ++ Sbjct: 359 GLQRRIEATHCKCVVVGVSGGLDSTLALLVSAQAVKNAGLPSTTVVGITMPGFGTTNRTK 418 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 ++ + LGC + I V F+ + Q E I EN Q+R R ILM ++N Sbjct: 419 NNSTELMRLLGCDSREISIAASVRQHFADIGQ--DESVHDITYENCQARERTQILMDVAN 476 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGF----NPLKDLYKTQVFQLASWRNSHGITSG 452 ++ T + SE+++G+ T GD + + K L ++ V ++ + G +G Sbjct: 477 KEGGFVVGTGDLSELALGWCTYNGDHMSMYAVNTSIPKTLVRSLVNEVGHFMEVDGF-AG 535 Query: 453 LGPLTEV-----IPPSILEKSPSAELRPHQTDQESLPPYPILD----------------- 490 + P+ + + P +L +P + Q ++++ Y + D Sbjct: 536 IAPIIDDIIDTPVSPELLPPNPDGTI--AQKTEDTVGSYILHDFFLYYTLRYGMSPEEVN 593 Query: 491 DIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 ++ K V + + +D E D+ + + ++KR P G K+ S Sbjct: 594 ELCKEAVRQSDEYNFSDSEI-DKWQKVFYTRFFRQQFKRNCMPDGVKVGTVS 644 >gi|261366932|ref|ZP_05979815.1| putative NH(3)-dependent NAD(+) synthetase [Subdoligranulum variabile DSM 15176] gi|282571048|gb|EFB76583.1| putative NH(3)-dependent NAD(+) synthetase [Subdoligranulum variabile DSM 15176] Length = 645 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 127/537 (23%), Positives = 219/537 (40%), Gaps = 77/537 (14%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I A ++P V D A N + A + + + L+ EL ++GY DL + ++ Sbjct: 13 IRAAAVSPALRVADCAYNAEQIIDAMQAFAAENVQLLCLPELSLTGYTCSDLFLQTPLLR 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + VVG P + + N ++ G ++ + K LPNYSEF+ Sbjct: 73 GAEKGLVNILQASKGLNLVTVVGVPVRHNSKLYNCAAVVCGGELLGLVPKTYLPNYSEFY 132 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKN-SNICKHLK 164 E+R F++G + D LGI +CED+W C H Sbjct: 133 EQRHFVTGMREAECIEYAGQETLMGTQLLFSCKQMPDFVLGIEVCEDLWAPVPPSCSH-A 191 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K R ++V GQ + +Y + G+ ++ F G + Sbjct: 192 LAGATVIANLSASDETIGKAAYREQLVAGQSGRLLCAYLYADAGHGESTTDMTFAGHNLI 251 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNY------------------------MS 258 + LA Q FS + + E + + + + +S Sbjct: 252 AENGVILA-QTAPFSGEEAIAELDLGRMVQERQHNTSFLPQNQGYTTVEFELMPTEICLS 310 Query: 259 DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK---------VIIGLSGGIDSALCA 309 + T ++P Q+ A C L LR +Q K ++G+SGG+DS L Sbjct: 311 RTVSPTPFVP-QDATARAERCELILR--IQAEGLAKRMEHTHARCAVLGISGGLDSCLAL 367 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 +AV A + + + +P T+ ++ +A +ALG + + I D VN F+ Sbjct: 368 LVAVRACKVLDRDPKEIVALTMPCFGTTRRTRSNAEILCEALGVSFAEINITDTVNQHFA 427 Query: 365 LMSQFLQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + Q +PS + EN Q+R+R LM +N + ++ T + SE+++G+ T GD Sbjct: 428 DIGQ----DPSTYDVTFENCQARVRTLELMDYANKNGGFVIGTGDLSELALGWATYNGDH 483 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 + + KT V + + T G L+ V+ IL+ S EL P D Sbjct: 484 MSMYGVNAGVPKTLVRHIVHYVAD---TCGEETLSRVL-LDILDTPVSPELLPTAED 536 >gi|296170500|ref|ZP_06852087.1| NAD synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894852|gb|EFG74574.1| NAD synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 680 Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 130/564 (23%), Positives = 230/564 (40%), Gaps = 84/564 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + + D A N R E + G+ + +F EL +SGY ED+V + + Sbjct: 12 VRVAACTHHTTIADPAANAESVLRLARECHDDGVAVAVFPELTLSGYSIEDIVMQDLLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++++ + + D +VVG P + + + N+ +++ G ++ V K LP Y EF+ Sbjct: 72 DVQAAVESIVAASSDLLPILVVGAPLRHRHRIYNTAIVVHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISG---YSNDPIVFRDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G I D+ G + ICED++ Sbjct: 132 ERRQLAPGDDERGTIRICDADVPFGPDLLFAASDIPGFVLHVEICEDMFVPIPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASF 221 GA L +L+ SP + + R + + + YV G+ E L +DG + Sbjct: 192 AGATVLANLSGSPITIGRAEDR--CLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTM 249 Query: 222 CFDGQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMS--DD-------SASTM------ 265 ++ + LA + E+ + + D S+ M DD SA + Sbjct: 250 VWENGELLASSERFPKGERRSVADVDIDLLRSERLRMGTFDDNRRHHRGSAESFRRVDFR 309 Query: 266 ------------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSG 301 ++P E + YN V L ++ NF K++IG+SG Sbjct: 310 LDPPGGDIGLRRDIERFPFVPANRERLEQDCYEAYNIQVAGLEQRLRALNFPKIVIGVSG 369 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T ++ +A +ALG + + I Sbjct: 370 GLDSTHALIVAARAMDREQRPRSDILAFTLPGFATGDRTKRNAIELCRALGVTFSEIDIT 429 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + F M E+ + EN+Q+ +R + L L+N ++L T + SE+ +G Sbjct: 430 ETAMLMFKEMDHPFGRGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELGLG 489 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHG-----ITSGLGPL--TEVIPPSILE 466 + T GD +N + KT + L W S G +T L + TE+ P E Sbjct: 490 WSTYGVGDQMSHYNVNGGVPKTLIQHLIRWVISSGQFESDVTDVLQSVLDTEISP----E 545 Query: 467 KSPSAELRPHQTDQESLPPYPILD 490 PS E Q+ ++ + PY + D Sbjct: 546 LVPSGEEEDLQSSEDKVGPYALQD 569 >gi|254417841|ref|ZP_05031565.1| NAD synthase family [Brevundimonas sp. BAL3] gi|196184018|gb|EDX78994.1| NAD synthase family [Brevundimonas sp. BAL3] Length = 657 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 127/512 (24%), Positives = 209/512 (40%), Gaps = 74/512 (14%) Query: 41 ILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSV 100 ++F EL +SGY +DL+ +++ + + L +++ D ++VG P + + + N Sbjct: 1 MVFPELGLSGYSIDDLLLQRALLDEVERQLVNLVAESRDLHPVVLVGAPLRREGRLYNCA 60 Query: 101 VILDAGNIIAVRDKINLPNYSEFHEKRTFISG---------------YSNDPIVFRDIRL 145 V + G ++ V K +LPNY EF+EKR F SG + D + D Sbjct: 61 VAIHRGRVLGVVPKGHLPNYREFYEKRWFASGRDVEGEITIGGETAPFGMDLLFQADDVD 120 Query: 146 GIL----ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLP 201 G++ ICED+W + GA L +L+AS K R + Q Sbjct: 121 GLIFHVEICEDVWAPAPPSDFAALAGALILTNLSASNIVVGKADTRRRLCELQSGRCWAA 180 Query: 202 IIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD 259 IY G+ +L +DG + ++ QLA + + FS + M D + Q M Sbjct: 181 YIYSAAGYGESTTDLAWDGQACIYELGAQLA-ETERFSLGSQMAVADIDVERLQLERMRT 239 Query: 260 DS------ASTM-----------------------------YIPLQEEEAD------YNA 278 + A+ M ++P D +N Sbjct: 240 GTFNEAAIANGMPDRRFRRVTFHLDPPVRNLGLQRRIDRFPFVPNDPSRLDQDCYEAFNI 299 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALGK--ENVQTIMLPYKYTSP 333 V L ++ K+ IG+SGG+DSA + AA D LG+ ++ +P TS Sbjct: 300 QVSGLAKRLEATGTAKICIGVSGGLDSAHALIVAAKVFDLLGRPRTDILGFTMPGFGTSA 359 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFS-LMSQFLQEEPS-GIVAENIQSRIRGNIL 391 ++ +A A LG + + I L L F + EP EN+Q+ +R ++L Sbjct: 360 RTKSNAYALMNGLGVTVEEIDIKPLAQQMLQDLRHPFARGEPVYDTTFENVQAGLRTDLL 419 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 +N M+L T N SE+++G+ T GD +N L KT + L W ++ + Sbjct: 420 FRAANQRNGMVLGTGNMSELALGWCTYGVGDQMSHYNVNGSLPKTLIQHLVRWTAANRL- 478 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 P + IL + S EL P + ES Sbjct: 479 --FDPAVSDVLLDILATTISPELIPQTAEGES 508 >gi|254168784|ref|ZP_04875625.1| NAD+ synthetase [Aciduliprofundum boonei T469] gi|197622221|gb|EDY34795.1| NAD+ synthetase [Aciduliprofundum boonei T469] Length = 263 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 114/212 (53%), Gaps = 23/212 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD+V N +IGLSGG+DS+ A + V ALG++ V + +P TS + EDA Sbjct: 18 IRDFVGDKN---AVIGLSGGLDSSTVAFLCVKALGRDRVLGVHMPDSVTSKEDKEDAKLV 74 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A LG ++ + I ++V + L E S N+++RIR IL ++N ++ Sbjct: 75 ADELGIEFRTIEIGEIVEKMNEKIK--LNNEMS---TANLKARIRMAILYGIANDENRLV 129 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSNKSEI +GY T YGD + F P+ DLYKTQV LA LG +P Sbjct: 130 TGTSNKSEILIGYFTKYGDGASDFAPIGDLYKTQVRMLA---------EKLG-----VPF 175 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDII 493 I+ K P+A L P Q+D++ + Y ILD I+ Sbjct: 176 RIISKVPTAGLLPGQSDEKEIGIKYEILDKIL 207 >gi|153814951|ref|ZP_01967619.1| hypothetical protein RUMTOR_01166 [Ruminococcus torques ATCC 27756] gi|317501609|ref|ZP_07959802.1| glutamine-dependent NAD+ synthetase [Lachnospiraceae bacterium 8_1_57FAA] gi|331088525|ref|ZP_08337439.1| hypothetical protein HMPREF1025_01022 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847519|gb|EDK24437.1| hypothetical protein RUMTOR_01166 [Ruminococcus torques ATCC 27756] gi|316896986|gb|EFV19064.1| glutamine-dependent NAD+ synthetase [Lachnospiraceae bacterium 8_1_57FAA] gi|330407865|gb|EGG87356.1| hypothetical protein HMPREF1025_01022 [Lachnospiraceae bacterium 3_1_46FAA] Length = 639 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 111/496 (22%), Positives = 201/496 (40%), Gaps = 64/496 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N + RA ++A +G ++ F EL ++GY DL + + Sbjct: 6 VKVAAATPDIRVADVEYNTEQICRAIDQAYEKGAKIVAFPELCVTGYTCGDLFTQNVLLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + T VG P + + N+ ++ G +I K LPNY EF+ Sbjct: 66 AAYGAVKKIAGHTKGKNILAFVGMPLTEGGKLYNTAAAVNDGKVIGFTTKTFLPNYGEFY 125 Query: 125 EKRTFISG--------YSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F G + + + F D+ +G ICED+W Sbjct: 126 EMRQFTPGPDSVRWIQFDGEKVPFGPKILFQDDETADLIVGAEICEDVWSPVPPSIEEAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R ++ GQ + + +Y N G+ +L+F G + Sbjct: 186 AGATIIVNCSASDETVGKGSYRTRLIAGQSARLIAGYVYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM------------------ 265 + L Q + + + +E ++ + + + S + Sbjct: 246 EDGTILR-QSERYKNEIIYSEIDLEKIVGERRKNTTFSPEKLNCGCPVVVPFHVGICDTV 304 Query: 266 ---------YIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALC- 308 ++P +E A + C + L+ + N ++G+SGG+DS L Sbjct: 305 LTRNFSQHPFVP-SDEAARAHICDEILTIQAMGLKKRLSHTNAKSAVVGISGGLDSTLAL 363 Query: 309 --AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 A A D LG K+ + + +P T+ ++ +A + G +PI + VN F Sbjct: 364 LVTAKAFDMLGRDKKEIIAVTMPCFGTTDRTYNNACEMTRQTGATLIEVPIGEAVNVHFR 423 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + + EN Q+R R +LM ++N M++ T + SE+++G+ T GD Sbjct: 424 DIGH--DPDVHDVTYENAQARERTQVLMDIANREAGMVIGTGDMSELALGWATYNGDHMS 481 Query: 425 GFNPLKDLYKTQVFQL 440 + + KT V L Sbjct: 482 MYGVNASVPKTLVRHL 497 >gi|163816125|ref|ZP_02207493.1| hypothetical protein COPEUT_02309 [Coprococcus eutactus ATCC 27759] gi|158448545|gb|EDP25540.1| hypothetical protein COPEUT_02309 [Coprococcus eutactus ATCC 27759] Length = 677 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 140/652 (21%), Positives = 261/652 (40%), Gaps = 118/652 (18%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L++A +G ++GN+ + EE + D+I+ EL I+GY DL + Sbjct: 15 MKNMLRVAAVTPKVHIGSVSGNVREIMDIYEEY-KDAADIIVTPELSITGYTCADLFENR 73 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I + L T G + +VVG P + + N L G ++A+ K LPNY Sbjct: 74 KLIDGARRGLLQLAMATCTGQSALVVGLPFEVDGELFNCAAFLQGGRVMAIVPKTYLPNY 133 Query: 121 SEFHEKRTFISGYSN-------DP------------------------IVF--------- 140 EF+EKR F + + DP ++F Sbjct: 134 GEFYEKRWFSARKYDAVMVNLMDPEDDGDELEYNAGSKKAGGRGVGSEVLFGNNVMIEMG 193 Query: 141 ---RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 + ++LGI ICED W + + L GAE + +L+AS K RH+++ S Sbjct: 194 SGDQRVKLGIEICEDAWTPVSPGRLLAMAGAEVILNLSASNEVIGKAAYRHKLIGSVSSD 253 Query: 198 VHLPIIYVN--QVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF-----MTEWHYDQ- 249 +YV+ +L+F G + ++ + L ++K F + +T+ +D+ Sbjct: 254 CLCGYVYVSAGMYESTSDLVFSGHNLMYENGKLLG-EVKPFEDGVLIRDISLTKIRHDRI 312 Query: 250 ------------QLSQWNYMSDDS------------ASTMYIP----LQEEEADYNACVL 281 ++ + D+ T ++P L+ A + V Sbjct: 313 ANKSFADCKRDFAFRKYETVVCDTPLMDKGNVLMKVKMTPFVPSGNKLERCMAIFKMQVA 372 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSL 336 L+ ++ + V++G+SGG+DS L ++ A L V I +P T+ ++ Sbjct: 373 GLQRRIEATHCKCVVVGVSGGLDSTLALLVSAQAVKNAGLPSTTVVGITMPGFGTTNRTK 432 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 ++ + LGC + I V F+ + Q E + EN Q+R R ILM ++N Sbjct: 433 NNSTELMRLLGCDSREISIAASVRQHFADIGQ--DESVHDVTYENCQARERTQILMDVAN 490 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGF----NPLKDLYKTQVFQLASWRNSHGITSG 452 ++ T + SE+++G+ T GD + + K L ++ V ++ + G +G Sbjct: 491 KEGGFVVGTGDLSELALGWCTYNGDHMSMYAVNTSIPKTLVRSLVNEVGHFMEVDGF-AG 549 Query: 453 LGPLTEV-----IPPSILEKSPSAELRPHQTDQESLPPYPILD----------------- 490 + P+ + + P +L +P + Q ++++ Y + D Sbjct: 550 IAPIIDDIIDTPVSPELLPPNPDGTI--AQKTEDTVGSYILHDFFLYYTLRYGMSPEEVN 607 Query: 491 DIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 ++ K V + + +D E D+ + + ++KR P G K+ S Sbjct: 608 ELCKEAVRQSDEYNFSDSEI-DKWQKVFYTRFFRQQFKRNCMPDGVKVGTVS 658 >gi|78777049|ref|YP_393364.1| NAD(+) synthase [Sulfurimonas denitrificans DSM 1251] gi|78497589|gb|ABB44129.1| NH(3)-dependent NAD(+) synthetase [Sulfurimonas denitrificans DSM 1251] Length = 257 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 27/238 (11%) Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 Y P+ E+ + L + V K V++GLSGGIDSA+ A +A G +N+ + Sbjct: 4 YAPIAEQLQHF------LYEEVHKTGIKNVVLGLSGGIDSAVVALLASRVFG-DNLLCVK 56 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P Y+S SL+DA + A + I ++ + + + + + N+ +R Sbjct: 57 MPSHYSSQSSLDDADEFSLAFNLRSITSSIEPMLKAY-----EEVNPDMDNLRRGNLSAR 111 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R + L LS A++L TSNKSE+ +GYGTLYGD++ NP+ DLYK++V++LA + N Sbjct: 112 LRMSTLFDLSAKHNALVLGTSNKSELMLGYGTLYGDLACALNPIGDLYKSEVYELAEYLN 171 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES 502 + SI++K+PSA+L Q+D+ L Y LD ++K +E + S Sbjct: 172 --------------VTNSIMKKAPSADLWAGQSDEADLGYTYSQLDKVLKLYIEEQLS 215 >gi|332158343|ref|YP_004423622.1| NAD synthetase [Pyrococcus sp. NA2] gi|331033806|gb|AEC51618.1| NAD synthetase [Pyrococcus sp. NA2] Length = 257 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 94/266 (35%), Positives = 148/266 (55%), Gaps = 24/266 (9%) Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 +Y+ V L D+++ V++G+SGG+DSA A +A ALG+E V +++PY + Sbjct: 5 NYDKVVERLVDFIRDVGKSGVVVGISGGVDSATVAYLATKALGRERVLGLIMPY--FENK 62 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +EDA A++LG Y V+ I +V+ F ++ L + G NI +R R IL A Sbjct: 63 DVEDAKLVAESLGIGYKVINIRPIVDSFRENLNLELDRKALG----NIMARTRMIILYAH 118 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +N ++L TSN+SE GY T +GD + + PL +LYKT+V+++A +G Sbjct: 119 ANSLGRIVLGTSNRSEFLTGYFTKWGDGASDYAPLINLYKTEVWEIA---------KRIG 169 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVE--NEESFINNDQEYN 511 +P I++K PSA L QTD++ L Y +LD+I+ R+V+ E+ I + Sbjct: 170 -----VPERIVKKKPSAGLWEGQTDEDELGISYALLDEILWRLVDLGMEKEKIAKELNIP 224 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTK 537 V +VE L+ GSE+KRR P+G K Sbjct: 225 MSKVEHVEKLVKGSEHKRR-LPLGPK 249 >gi|20092334|ref|NP_618409.1| NAD synthetase [Methanosarcina acetivorans C2A] gi|25090757|sp|Q8TK88|NADE_METAC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|19917581|gb|AAM06889.1| NAD+ synthetase [Methanosarcina acetivorans C2A] Length = 256 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 19/265 (7%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 E N + +R+ K ++G+SGGIDSAL A + V+ALGKE V + +P + Sbjct: 4 EKAQNRIIEFIRNETDKAGVDGAVVGISGGIDSALTATLTVEALGKERVLGLHMPESSLT 63 Query: 333 PQ-SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 P EDA A LG +Y + I +V+ F + + + E + N+++R R ++L Sbjct: 64 PAVDSEDAKILADWLGIEYRTIDISGIVSAFMASIPE--SESSDRLTRGNLKARTRMSLL 121 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +N M++ T NK+EI +GY T YGD P+ +YKT+V++L+ Sbjct: 122 YFHANRLNRMVVGTGNKTEILLGYYTKYGDGGVDLEPIGGIYKTEVWELSRR-------- 173 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN-EESFINNDQE 509 LG IP ++ K PSA L QTD+ L Y +DD+++ I E E+ I D Sbjct: 174 -LG-----IPDPLITKKPSAGLWTGQTDEAELGISYLKVDDVLRMIEEGAEQEKILKDTG 227 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPV 534 + E + V + +E+KR+ PV Sbjct: 228 ISIEQLNSVTRRIERNEHKRKSPPV 252 >gi|294646816|ref|ZP_06724437.1| NAD+ synthetase [Bacteroides ovatus SD CC 2a] gi|292637761|gb|EFF56158.1| NAD+ synthetase [Bacteroides ovatus SD CC 2a] Length = 626 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 133/556 (23%), Positives = 238/556 (42%), Gaps = 79/556 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLITVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGY---SND--------PI----VFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N+ PI +F D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLA----FQMKHFSEQNFMTEWHYDQ-----------QLSQWNYMSDDSASTM----- 265 LA F MK EQ ++E ++ +Q N + D A ++ Sbjct: 246 GSLLARSERFSMK---EQLIISEIDVERIRAERRINTTFAANQAN-LGDKKAVSIATEFV 301 Query: 266 ---------------YIP----LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++P L E E ++ V L + ++G+SGG+DS Sbjct: 302 NSKELTLTRKFNAHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVVGISGGLDS 361 Query: 306 ALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LV 359 L + V D LG ++ + I +P T+ ++ +A K+LG + I D + Sbjct: 362 TLALLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACI 421 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T Sbjct: 422 QHFKDIEHDVNVHD---VTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYN 478 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELR 474 GD + + KT V L W +G+ + L + I P ++ + E++ Sbjct: 479 GDHMSMYGVNASVPKTLVKYLVQWVAENGMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 475 PHQTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 539 --QKTEDLVGPYELHD 552 >gi|167745420|ref|ZP_02417547.1| hypothetical protein ANACAC_00111 [Anaerostipes caccae DSM 14662] gi|167655141|gb|EDR99270.1| hypothetical protein ANACAC_00111 [Anaerostipes caccae DSM 14662] Length = 632 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 134/611 (21%), Positives = 253/611 (41%), Gaps = 86/611 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + +A + L++F+EL +SGY DL + ++ Sbjct: 6 IKVAAATPKVKVADPEYNTKEIIKIIRQAGDEEASLLVFSELAVSGYTCGDLFLQDPLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +K +T + VG P + + N V L G I+ V KI+LPNY EF+ Sbjct: 66 ESLKGLMEIKKETKGMDMVVTVGCPLVVEHKLYNCGVFLFDGRILGVVPKIHLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIVFRD-------------------IRLGILICEDIWKNSNICKHLKK 165 E R F G + D + + + ICED+W H Sbjct: 126 EARHFAKGKREVKDILLDGEYVPFGANILLECTNIPELTIAMEICEDLWVPLPPSTHHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +V+ Q + + +Y N G+ ++++ G Sbjct: 186 AGATVICNPSASVETTTKEVYRSALVSNQSARLLSGYVYANAGEGESTTDVVYSGHHLIC 245 Query: 224 DGQQQLAFQMKHF---------------SEQNFMTEWHYDQQLSQW-----------NYM 257 + LA + K F +E+ MT + +++ ++ N + Sbjct: 246 ENGTVLA-EAKRFVNDIIYADMDVKRLVAERRKMTTF-FEEDSEEYRSVPFILPVKVNQI 303 Query: 258 SDDSASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + ++P EE + C + L+ ++ N ++G+SGG+DS L Sbjct: 304 TRKFPKNPFVPSSREERE-KRCDEILSIQSMGLKKRLEHTNCTHAVVGISGGLDSTLAVL 362 Query: 311 IAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V A + +EN+ + +P T+ ++ ++A + LG + I V F Sbjct: 363 VTVRAFDMLDIPRENIICVTMPCFGTTDRTYQNAVSLIHELGATLKEVNIEKAVRQHFKD 422 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +E+ + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 423 IEH--EEDVHDVTYENSQARERTQILMDIANKYNGMVIGTGDMSELALGWATYNGDHMSM 480 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + + T L++V+ +L+ S EL P Q Sbjct: 481 YAVNCSVPKTLVRYLVLY---YAETVENKELSDVL-MDVLDTPVSPELLPPVDGVISQKT 536 Query: 480 QESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV-RYVEHL---LYGSEY 527 ++ + PY + D + ++ + + +Y+DET+ ++++ + ++ Sbjct: 537 EDLVGPYELHDFFLYYMLRFGFPKAKLYRMAKLTFAGDYDDETIQKWLDKFYWRFFSQQF 596 Query: 528 KRRQAPVGTKI 538 KR P G K+ Sbjct: 597 KRSCLPDGPKV 607 >gi|317473033|ref|ZP_07932333.1| NAD+ synthetase [Anaerostipes sp. 3_2_56FAA] gi|316899462|gb|EFV21476.1| NAD+ synthetase [Anaerostipes sp. 3_2_56FAA] Length = 632 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 134/611 (21%), Positives = 253/611 (41%), Gaps = 86/611 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + +A + L++F+EL +SGY DL + ++ Sbjct: 6 IKVAAATPKVKVADPEYNTKEIIKIIRQAGDEEASLLVFSELAVSGYTCGDLFLQDPLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +K +T + VG P + + N V L G I+ V KI+LPNY EF+ Sbjct: 66 ESLKGLMEIKKETKGMDMVVTVGCPLVVEHKLYNCGVFLFDGRILGVVPKIHLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIVFRD-------------------IRLGILICEDIWKNSNICKHLKK 165 E R F G + D + + + ICED+W H Sbjct: 126 EARHFAKGKREVKDILLDGEHVPFGANILLECTNIPELTIAMEICEDLWVPLPPSTHHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +V+ Q + + +Y N G+ ++++ G Sbjct: 186 AGATVICNPSASVETTTKEVYRSALVSNQSARLLSGYVYANAGEGESTTDVVYSGHHLIC 245 Query: 224 DGQQQLAFQMKHF---------------SEQNFMTEWHYDQQLSQW-----------NYM 257 + LA + K F +E+ MT + +++ ++ N + Sbjct: 246 ENGTVLA-EAKRFVNDIIYADMDVKRLVAERRKMTTF-FEEDSEEYRRVPFILPVKVNQI 303 Query: 258 SDDSASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + ++P EE + C + L+ ++ N ++G+SGG+DS L Sbjct: 304 TRKFPKNPFVPSSREERE-KRCDEILSIQSMGLKKRLEHTNCTHAVVGISGGLDSTLAVL 362 Query: 311 IAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V A + +EN+ + +P T+ ++ ++A + LG + I V F Sbjct: 363 VTVRAFDMLDIPRENIICVTMPCFGTTDRTYQNAVSLIHELGATLKEVNIEKAVRQHFKD 422 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +E+ + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 423 IEH--EEDVHDVTYENSQARERTQILMDIANKYNGMVIGTGDMSELALGWATYNGDHMSM 480 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + + T L++V+ +L+ S EL P Q Sbjct: 481 YAVNCSVPKTLVRYLVLY---YAETVENKELSDVL-MDVLDTPVSPELLPPVDGVISQKT 536 Query: 480 QESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV-RYVEHL---LYGSEY 527 ++ + PY + D + ++ + + +Y+DET+ ++++ + ++ Sbjct: 537 EDLVGPYELHDFFLYYMLRFGFPKAKLYRMAKLTFAGDYDDETIQKWLDKFYWRFFSQQF 596 Query: 528 KRRQAPVGTKI 538 KR P G K+ Sbjct: 597 KRSCLPDGPKV 607 >gi|170759603|ref|YP_001785884.1| NAD synthetase [Clostridium botulinum A3 str. Loch Maree] gi|169406592|gb|ACA55003.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A3 str. Loch Maree] Length = 638 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 142/626 (22%), Positives = 248/626 (39%), Gaps = 96/626 (15%) Query: 4 KLKIAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 K I ++ PV V DI NI ++ + + LI+F EL I+ Y +L + Sbjct: 5 KYYIRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSL 64 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I I + + D I +G P + + N V++ G I+ + K LPNYS Sbjct: 65 LISKALDGIHNICKYSIDKDVLIAIGAPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYS 124 Query: 122 EFHEKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHL 163 EF+EKR F GY N P ++F D + +CED+W +L Sbjct: 125 EFYEKRWFTEGYKIKSEKINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYL 184 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASF 221 GA + +L+AS +K R +V Q +Y + +L+F G Sbjct: 185 ALMGANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLL 244 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM---------- 265 + L + K F +N + D ++L ++ + + Sbjct: 245 IGENGSILK-ENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFA 303 Query: 266 ---------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGID 304 ++P EE+ +N +L + N K +IG+SGG+D Sbjct: 304 INDVGDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLD 363 Query: 305 SALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S L + K EN+ TI +P T+ ++ +A + K L + I D Sbjct: 364 STLALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAA 423 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T Sbjct: 424 LQHFKDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYN 481 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH--- 476 GD ++ + KT V L + + + ++E++ IL+ S EL P Sbjct: 482 GDHMSMYSVNCSIPKTLVRYLVRYVAENEVAK---EISEIL-IDILDTPVSPELLPKDKE 537 Query: 477 ----QTDQESLPPYPILD-------------DIIKRI--VENEESFINNDQEYNDETVRY 517 Q ++ + PY + D D IK++ + ++S+ D+E D+ Y Sbjct: 538 GNIVQKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSY---DKETIDKWFSY 594 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ S Sbjct: 595 FIRRFFTQQFKRSAVPDGPKVGTISL 620 >gi|114704940|ref|ZP_01437848.1| NAD synthetase [Fulvimarina pelagi HTCC2506] gi|114539725|gb|EAU42845.1| NAD synthetase [Fulvimarina pelagi HTCC2506] Length = 692 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 134/563 (23%), Positives = 225/563 (39%), Gaps = 81/563 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+A D A N + EA+ G DL+++ EL +SGY +DL + + + Sbjct: 22 VRVAVATPTVRNADPAFNATAIQAQAREASEAGADLVVYPELCLSGYANDDLHLQAALVA 81 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + I +L T + G ++VG + + N+ V + G I+ V K LPNY E++ Sbjct: 82 RTAQEIASLAEATRELGPLLLVGAIVERSGSLYNTAVAIHRGTILGVVPKTYLPNYREYY 141 Query: 125 EKRTFISGYSND----PIVFRDIRLG----------------ILICEDIWKNSNICKHLK 164 EKR F SG + + + G + ICED W S Sbjct: 142 EKRWFASGAGTEGQTIALAGTSVPFGPDLLFAAENMPSFTVHVEICEDYWSPSPPSIDGA 201 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 G L +L+AS K ++RH + Q IY G+ +L +DG Sbjct: 202 LAGGTILCNLSASNITIGKSRERHLLSASQSMRCLAAYIYSAAGHGESTTDLAWDGQGGI 261 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD-----QQLSQWNYMSDDSASTM------------ 265 ++ +A + FS +N + D Q+ + D + Sbjct: 262 YELGDLMA-ESARFSHENALVYSDIDTGRIRQERLRMPTFHDAAVQRGKPESRFRRIAFE 320 Query: 266 ------------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSG 301 ++P E+ D +N V L + ++IG+SG Sbjct: 321 HRPGVAVTDLKRPVRRFPFVPNDAEKLDQDCYEAFNIQVEGLITRYKATPGEMMVIGISG 380 Query: 302 GIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + AA A D +G +E + +P T + +A A +A+G + + I Sbjct: 381 GLDSTHALIVAAKACDRMGVSREKILAFTMPGFATGDSTKSNAWALMRAIGVTAEEIDIR 440 Query: 357 DLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 F+ M F EP I EN+Q+ +R + L L+N ++ T + SE+++G Sbjct: 441 PAARQLFADMGHPFSDGEPVYDITFENVQAGLRTDYLFRLANQRGGFVIGTGDLSELALG 500 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD + + KT + L W S G P T+ + +IL+ S EL Sbjct: 501 WCTYGVGDQMSHYAVNTGVPKTLIQYLIRWCVSSG---QFDPETDTVLNAILDTEISPEL 557 Query: 474 RPH------QTDQESLPPYPILD 490 P Q+ +E + PY + D Sbjct: 558 VPPDAAGGLQSTEEKIGPYELND 580 >gi|32266507|ref|NP_860539.1| NH(3)-dependent NAD(+) synthetase NadE [Helicobacter hepaticus ATCC 51449] gi|46396330|sp|Q7VHF9|NADE_HELHP RecName: Full=NH(3)-dependent NAD(+) synthetase gi|32262558|gb|AAP77605.1| NH(3)-dependent NAD(+) synthetase NadE [Helicobacter hepaticus ATCC 51449] Length = 274 Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 21/214 (9%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 N C+ ++ +Q+ F KV++GLSGGIDSA+ A +A ALG ENV+ +++P ++ + Sbjct: 6 NPCIHFIQKQLQERGFKKVVLGLSGGIDSAVVATLATLALGSENVRALLMPSLSSNEEHF 65 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHF-----FSLMSQFLQ--EEPSGIVAENIQSRIRGN 389 DA A L + ++ + +F L ++++ + + N +RIR Sbjct: 66 NDAFNLAHNLELESKIIQLAPFQENFAKQEGMDLSGKYMEKLDMNQKMRMGNFCARIRMT 125 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +L ++ A++L TSNKSEI +GYGT++GD++ NP+ LYKTQ+F A N Sbjct: 126 MLYDCASADNALVLGTSNKSEILLGYGTIFGDLAYAINPIGGLYKTQIFAFARALN---- 181 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 +P I+ K PSA+L +Q+D+ L Sbjct: 182 ----------VPQEIIAKKPSADLFANQSDETDL 205 >gi|298483704|ref|ZP_07001878.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D22] gi|298270121|gb|EFI11708.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D22] Length = 641 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 133/556 (23%), Positives = 238/556 (42%), Gaps = 79/556 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLITVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGY---SND--------PI----VFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N+ PI +F D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLATNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLA----FQMKHFSEQNFMTEWHYDQ-----------QLSQWNYMSDDSASTM----- 265 LA F MK EQ ++E ++ +Q N + D A ++ Sbjct: 246 GSLLARSERFSMK---EQLIISEIDVERIRAERRINTTFAANQAN-LGDKKAVSIATEFV 301 Query: 266 ---------------YIP----LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++P L E E ++ V L + ++G+SGG+DS Sbjct: 302 NSKELTLTRKFNAHPFVPQGIELNEHCEEIFSIQVAGLAQRLVHTGAKTAVVGISGGLDS 361 Query: 306 ALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LV 359 L + V D LG ++ + I +P T+ ++ +A K+LG + I D + Sbjct: 362 TLALLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACI 421 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T Sbjct: 422 QHFKDIEHDMNVHD---VTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYN 478 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELR 474 GD + + KT V L W +G+ + L + I P ++ + E++ Sbjct: 479 GDHMSMYGVNASVPKTLVKYLVQWVAENGMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 475 PHQTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 539 --QKTEDLVGPYELHD 552 >gi|237722311|ref|ZP_04552792.1| glutamine-dependent NAD synthetase [Bacteroides sp. 2_2_4] gi|293372030|ref|ZP_06618429.1| NAD+ synthetase [Bacteroides ovatus SD CMC 3f] gi|229448121|gb|EEO53912.1| glutamine-dependent NAD synthetase [Bacteroides sp. 2_2_4] gi|292633041|gb|EFF51623.1| NAD+ synthetase [Bacteroides ovatus SD CMC 3f] Length = 641 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 133/556 (23%), Positives = 238/556 (42%), Gaps = 79/556 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGY---SND--------PI----VFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N+ PI +F D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLA----FQMKHFSEQNFMTEWHYDQ-----------QLSQWNYMSDDSASTM----- 265 LA F MK EQ ++E ++ +Q N + D A ++ Sbjct: 246 GSLLARSERFSMK---EQLIISEIDVERIRAERRINTTFAANQAN-LGDKKAVSIATEFV 301 Query: 266 ---------------YIP----LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++P L E E ++ V L + ++G+SGG+DS Sbjct: 302 NSKELTLTRKFNAHPFVPQGIELNEHCEEIFSIQVAGLAQRLVHTGAKTAVVGISGGLDS 361 Query: 306 ALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LV 359 L + V D LG ++ + I +P T+ ++ +A K+LG + I D + Sbjct: 362 TLALLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACI 421 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T Sbjct: 422 QHFKDIEHDMNVHD---VTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYN 478 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELR 474 GD + + KT V L W +G+ + L + I P ++ + E++ Sbjct: 479 GDHMSMYGVNASVPKTLVKYLVQWVAENGMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 475 PHQTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 539 --QKTEDLVGPYELHD 552 >gi|237715911|ref|ZP_04546392.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D1] gi|262407524|ref|ZP_06084072.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 2_1_22] gi|294808853|ref|ZP_06767582.1| NAD+ synthetase [Bacteroides xylanisolvens SD CC 1b] gi|229443558|gb|EEO49349.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D1] gi|262354332|gb|EEZ03424.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 2_1_22] gi|294443895|gb|EFG12633.1| NAD+ synthetase [Bacteroides xylanisolvens SD CC 1b] Length = 641 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 133/556 (23%), Positives = 238/556 (42%), Gaps = 79/556 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLITVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGY---SND--------PI----VFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N+ PI +F D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLA----FQMKHFSEQNFMTEWHYDQ-----------QLSQWNYMSDDSASTM----- 265 LA F MK EQ ++E ++ +Q N + D A ++ Sbjct: 246 GSLLARSERFSMK---EQLIISEIDVERIRAERRINTTFAANQAN-LGDKKAVSIATEFV 301 Query: 266 ---------------YIP----LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++P L E E ++ V L + ++G+SGG+DS Sbjct: 302 NSKELTLTRKFNAHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVVGISGGLDS 361 Query: 306 ALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LV 359 L + V D LG ++ + I +P T+ ++ +A K+LG + I D + Sbjct: 362 TLALLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACI 421 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T Sbjct: 422 QHFKDIEHDVNVHD---VTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYN 478 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELR 474 GD + + KT V L W +G+ + L + I P ++ + E++ Sbjct: 479 GDHMSMYGVNASVPKTLVKYLVQWVAENGMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 475 PHQTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 539 --QKTEDLVGPYELHD 552 >gi|295087593|emb|CBK69116.1| NH(3)-dependent NAD(+) synthetase [Bacteroides xylanisolvens XB1A] Length = 641 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 133/556 (23%), Positives = 237/556 (42%), Gaps = 79/556 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLITVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGY---SND--------PI----VFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N+ PI +F D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLA----FQMKHFSEQNFMTEWHYDQ-----------QLSQWNYMSDDSASTM----- 265 LA F MK EQ ++E ++ +Q N + D A ++ Sbjct: 246 GSLLARSERFSMK---EQLIISEIDVERIRAERRINTTFAANQAN-LGDKKAVSIATEFV 301 Query: 266 ---------------YIP----LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++P L E E ++ V L + ++G+SGG+DS Sbjct: 302 NSKELTLTRKFNAHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVVGISGGLDS 361 Query: 306 ALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LV 359 L + V D LG + + I +P T+ ++ +A K+LG + I D + Sbjct: 362 TLALLVCVKTFDKLGLSRNGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACI 421 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T Sbjct: 422 QHFKDIEHDMNVHD---VTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYN 478 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELR 474 GD + + KT V L W +G+ + L + I P ++ + E++ Sbjct: 479 GDHMSMYGVNASVPKTLVKYLVQWVAENGMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 475 PHQTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 539 --QKTEDLVGPYELHD 552 >gi|323358755|ref|YP_004225151.1| NAD synthase [Microbacterium testaceum StLB037] gi|323275126|dbj|BAJ75271.1| NAD synthase [Microbacterium testaceum StLB037] Length = 685 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 127/561 (22%), Positives = 228/561 (40%), Gaps = 82/561 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + + D A N + + +G+ + +F EL ++GY +DLV + + A Sbjct: 17 RVAACTIPVAIADPATNADAVLESARACDAEGVAVAVFPELCLTGYAIDDLVMQDPLLDA 76 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A++ + S + D ++VG P + + N V++ G ++ V K LP Y EF+E Sbjct: 77 VETALERVVSASVDLLPMLLVGAPLRHGNRLFNCAVVIHRGRVLGVAPKAYLPTYREFYE 136 Query: 126 KRTFISGYSN--------------------DPIVFRDIRLGILICEDIWKNSNICKHLKK 165 R + G D + + + +CED+W Sbjct: 137 SRWYARGDDQAGQHIRVAGETVPFGPDLLFDAVDVPGLTVHAEVCEDVWVPIPPSSGAAL 196 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASF 221 GA L +L+ SP + R+ + Q + YV GQ E + +DG + Sbjct: 197 AGATVLANLSGSPITIGRADDRN--LLSQSQSMRCLAAYVYAAAGQGESTNDVSWDGQTM 254 Query: 222 CFDGQQQL-----------------------------------------AFQMKHFSEQN 240 ++G Q L AF+ F Sbjct: 255 IYEGGQLLDTTERFPDGPRRSVADIDLDRLRQERIRQGTFDDNRRTTAPAFRTVSFELAP 314 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + L ++ ++ DD A Q+ +N V L +Q K ++G+S Sbjct: 315 PAADIGLRRALDRFPFVPDDPARLA----QDCYEAFNIQVSGLVQRLQAIGNPKPVLGVS 370 Query: 301 GGIDSA---LCAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L A A+D +G+ ++ T LP TS ++ +A A A+A+G + + I Sbjct: 371 GGLDSTHALLVIARAMDRMGRPRSDILTYTLPGFATSEKTKRNAIALAEAVGASIEEIDI 430 Query: 356 HDLVNHFFSLMSQ-FLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 + S M F EP + EN+Q+ +R + L L+N + +++ T + SEI++ Sbjct: 431 RPAASEMLSRMGHPFASGEPVHDVTFENVQAGLRTDYLFRLANQNNGIVVGTGDLSEIAL 490 Query: 414 GYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG--LGPLTEVIPPSI-LEKSP 469 G+ T GD ++ + KT + + W S G S +G L V+ I E P Sbjct: 491 GWSTYGVGDQMSHYSVNPGVPKTLIQHVIRWVISSGELSAETVGVLQAVLDTEISPELVP 550 Query: 470 SAELRPHQTDQESLPPYPILD 490 + + Q+ ++ + PY + D Sbjct: 551 AGQDGRMQSTEDRIGPYNLHD 571 >gi|322804823|emb|CBZ02376.1| NAD synthetase [Clostridium botulinum H04402 065] Length = 638 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 141/623 (22%), Positives = 247/623 (39%), Gaps = 96/623 (15%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I ++ PV V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I +G P + + N V++ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAIGAPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N P ++F D + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM------------- 265 L + K F +N + D ++L ++ + + Sbjct: 248 NGSILK-ENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAIND 306 Query: 266 ------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P EE+ +N +L + N K +IG+SGG+DS L Sbjct: 307 VGDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTL 366 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + K EN+ TI +P T+ ++ +A + K L + I D Sbjct: 367 ALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQH 426 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 427 FKDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDH 484 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 ++ + KT V L + + + ++E++ IL+ S EL P Sbjct: 485 MSMYSVNCSIPKTLVRYLVRYVAENEVAK---EISEIL-IDILDTPVSPELLPKDKEGNI 540 Query: 477 -QTDQESLPPYPILD-------------DIIKRI--VENEESFINNDQEYNDETVRYVEH 520 Q ++ + PY + D D IK++ + ++S+ D+E D+ Y Sbjct: 541 VQKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSY---DKETIDKWFSYFIR 597 Query: 521 LLYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ S Sbjct: 598 RFFTQQFKRSAVPDGPKVGTISL 620 >gi|332828239|gb|EGK00951.1| hypothetical protein HMPREF9455_02740 [Dysgonomonas gadei ATCC BAA-286] Length = 646 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 135/542 (24%), Positives = 224/542 (41%), Gaps = 77/542 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + V D N + + EA +G+ +I+F EL I+ Y DL ++ ++ Sbjct: 7 VRVAAASPSLKVADCDYNTDEILKQIHEAQSKGVSVIVFPELGITAYTCGDLFLQRLLLE 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + T D ++VG P + + N V++ AG I K LPNY+EF+ Sbjct: 67 EAEKSLQRICDATRDLSVTVIVGVPVEISGRLYNMAVVVAAGYIHGAVPKTFLPNYNEFY 126 Query: 125 EKRTFISGYSNDP---------------IVFRD--IRLGILICEDIWKNSNICKHLKKQG 167 EKR F S ++FR I ICED+W G Sbjct: 127 EKRWFSSSEELKAQSASLCGQCVPVGINLIFRTPGFSFAIEICEDLWTPIPPSCAAALSG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS----- 220 AE +F+L+AS K R +V+ Q + +Y G+ ++IF G+S Sbjct: 187 AEVIFNLSASNETTGKHAYRKALVSQQSARCIAGYVYAAAGAGESTTDIIFAGSSLIAEN 246 Query: 221 ---------FCFDGQQQLA-----------FQMKHF--SEQNFMTEWHYDQQLSQWNYMS 258 F FD Q A + K F SE + +++ N Sbjct: 247 GSVLAEAERFSFDSQLIAADIDIERLRNDRLRNKSFSLSEYRVLDNIQFEEIDIDINKEE 306 Query: 259 DDSA------STMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + A ST ++P Q+ D ++ V L + N +IG+SGG+DS Sbjct: 307 KEFALNRYVSSTPFVPAQDATLDERCDEIFSMQVGGLAKRMLHVNGKTAVIGVSGGLDST 366 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVN 360 L + V L +E + I +P T+ ++ +A ++LG + I D +V Sbjct: 367 LALLVLVKTFDKLNLSREGIYGITMPGFGTTDRTYTNAIKLMRSLGVTIKEISIKDAVVQ 426 Query: 361 HFFSLMSQFLQEEPSG---IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 HF + E +G I EN Q+R R ILM +N +++ T + SE+++G+ T Sbjct: 427 HFKDI------EHDAGTHDITYENSQARERTQILMDYANKVNGLVIGTGDLSELALGWCT 480 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 GD + + KT V L SW + + +++I +++ S EL P Sbjct: 481 YNGDHMSMYAVNTGVPKTLVRTLVSWVAE----TQMDQESKIILEDVVDTPVSPELLPAA 536 Query: 478 TD 479 D Sbjct: 537 ED 538 >gi|153938594|ref|YP_001389901.1| NAD synthetase [Clostridium botulinum F str. Langeland] gi|152934490|gb|ABS39988.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum F str. Langeland] gi|295317984|gb|ADF98361.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum F str. 230613] Length = 638 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 143/623 (22%), Positives = 246/623 (39%), Gaps = 96/623 (15%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I ++ PV V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I VG P + + N VI+ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAVGAPLLYKNSLYNCAVIIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N P ++F D + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM------------- 265 L + K F +N + D ++L ++ + + Sbjct: 248 NGSILK-ENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAIND 306 Query: 266 ------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P EE+ +N +L + N K +IG+SGG+DS L Sbjct: 307 VGNFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTL 366 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + K EN+ TI +P T+ ++ +A + K L + I D Sbjct: 367 ALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQH 426 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 427 FKDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDH 484 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 ++ + KT V L + + + ++E++ IL+ S EL P Sbjct: 485 MSMYSVNCSIPKTLVRYLVRYVAENEVAK---EISEIL-IDILDTPVSPELLPKDKEGNI 540 Query: 477 -QTDQESLPPYPILD-------------DIIKRI--VENEESFINNDQEYNDETVRYVEH 520 Q ++ + PY + D D IK + + ++S+ D+E D+ Y Sbjct: 541 VQKTEDIVGPYELHDFFLYYFIRQGATPDKIKLLAKIAFKDSY---DKETIDKWFSYFIR 597 Query: 521 LLYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ S Sbjct: 598 RFFTQQFKRSAVPDGPKVGTISL 620 >gi|329954457|ref|ZP_08295548.1| NAD+ synthase [Bacteroides clarus YIT 12056] gi|328527425|gb|EGF54422.1| NAD+ synthase [Bacteroides clarus YIT 12056] Length = 643 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 141/616 (22%), Positives = 248/616 (40%), Gaps = 83/616 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + A+ +G+ +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNAGQIEKEIIIADGKGVQIIAFPELCITGYTCADLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G I+ + K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQMDIISILGMPVPLNGVLLNTAVVIQKGKILGIVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S R D GI ICED+W L QG Sbjct: 126 EKRWFTSAREVSETTARLCGQVVPMGRNLLFETADTTFGIEICEDLWAPIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNLSADNEGIGKHAYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMSDDSA-------------STMYI---- 267 LA + F EQ ++E + ++ + +A ST Y+ Sbjct: 246 GTLLASSERFSFGEQVVISEIDVEHIRTERRVNTTFTACHANCAPEVPVRISTEYVNSGD 305 Query: 268 ----------------PLQEEEAD--YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 P E + ++ V L + N ++G+SGG+DS L Sbjct: 306 LNLTRTFDPHPFVPQGPALNERCEEIFSIQVSGLAQRLVHTNAKSAVVGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + V D LG ++ + + +P T+ ++ +A +LG + I D + HF Sbjct: 366 LVCVKTFDKLGWDRKGIIGVTMPGFGTTDRTHTNAVDLMTSLGVTMREVSIKDACIQHFK 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDINVHD---VVYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASW--RNSHGITSGLGPLTEV---IPPSILEKSPSAELRPHQT 478 + + KT V L W N TS L V I P ++ + +R Q Sbjct: 483 SMYGVNGSIPKTLVKHLVKWVAENDMDETSRATLLDIVDTPISPELIPADENGNIR--QI 540 Query: 479 DQESLPPYPILDDII-----------KRIVENEESFIN-NDQEYNDETVRYVEHLLYGSE 526 ++ + PY + D + K +F + D+E + +R + + Sbjct: 541 TEDLVGPYELHDFFLYYFLRCGFRPSKIFFLAARTFKDVYDEETIKKWLRTFCRRFFNQQ 600 Query: 527 YKRRQAPVGTKITAKS 542 +KR P G K+ + S Sbjct: 601 FKRSCLPDGPKVGSIS 616 >gi|299140492|ref|ZP_07033630.1| glutamine-dependent NAD+ synthetase [Prevotella oris C735] gi|298577458|gb|EFI49326.1| glutamine-dependent NAD+ synthetase [Prevotella oris C735] Length = 642 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 136/628 (21%), Positives = 255/628 (40%), Gaps = 104/628 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + +A +G+++I+F EL I+GY +DL + + Sbjct: 6 IKVASAIPSVKVGDVKYNTLQIENLIVQAESRGVEIIVFPELSITGYTCQDLFRQTLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ L + +VG P +LN +++ G I+ + K LPNY+EF+ Sbjct: 66 ATDTAVMMLLDFSRKLNVISIVGAPILVGNLLLNCALVIQQGEILGIIPKTYLPNYNEFY 125 Query: 125 EKRTFISG----------------YSNDPIVF---RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S S DP +F ++ G+ ICED+W L Sbjct: 126 EKRWFASSQDLRPTEIRYAGHKLLVSADPKLFVTSLGVKFGVEICEDVWAPIPPSNRLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV---------NQVGGQDELIF 216 GA+ +F+L+A+ K K ++ Q + + +Y + V G + LI+ Sbjct: 186 SGADIIFNLSATNELIGKHKYLKSLLAQQSARMMSGYVYSSCGFGESTQDVVYGGNALIY 245 Query: 217 DGASFCFDGQQ-----QLA--------FQMKHFSEQNFM--------------------- 242 + +G++ QL +++ + F+ Sbjct: 246 ENGVLLAEGERFSLTPQLVVSQIDVERLRVERSNNTTFVNAQRQGVMNGSEVLCHGIDAK 305 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 T++ ++ + ++ D T E +N VL L + V++G+SGG Sbjct: 306 TDFCLERTIDPCPFIPQDDGLTTSC-----EEIFNIQVLGLAKRLVHTGCKHVVLGISGG 360 Query: 303 IDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS L + + K + + + +P T+ ++ ++A ++L +PI Sbjct: 361 LDSTLALLVCIRTFDKLQMDRKGIIGVTMPGFGTTDRTYQNAIQLMESLKITIREIPIAK 420 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 V F + + + EN Q+R R ILM LSN M++ T + SE+++G+ T Sbjct: 421 SVTQHFEDIGHDMTIH--DVTYENGQARERTQILMDLSNQVGGMVIGTGDLSELALGWAT 478 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 GD + + KT + L + + + + I I++ S EL P Sbjct: 479 YNGDHMSMYGVNASVPKTLIQYLMRY-----VATTMSSRVSDILMDIIDTPISPELIPAD 533 Query: 478 TD-------QESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETVR--- 516 D ++ + PY + D + K + +++F + Y+DE ++ Sbjct: 534 ADNTICQKTEDLVGPYELHDFFLYYFLRFGFRPRKIFMLAQKAFAGH---YDDEVIKKWL 590 Query: 517 -YVEHLLYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ + S Sbjct: 591 TTFCRRFFSQQFKRSCLPDGPKVGSVSL 618 >gi|221195361|ref|ZP_03568416.1| glutamine-dependent NAD+ synthetase [Atopobium rimae ATCC 49626] gi|221184548|gb|EEE16940.1| glutamine-dependent NAD+ synthetase [Atopobium rimae ATCC 49626] Length = 657 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 116/502 (23%), Positives = 211/502 (42%), Gaps = 68/502 (13%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + +A + P V D+ N+ + ++A +I+ EL I+GY EDL ++ + Sbjct: 6 VKVAAITPKVRVADVTYNVESCLSSIKKAYAEHEARVIVLPELCITGYTCEDLFWQDELL 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A S + ++ T D A ++VG P + + N +L G ++ + K N+P Y+EF Sbjct: 66 DAAESGLASIALHTFDVDALVLVGLPVRVASKLYNCAAVLYGGEVLGLVPKQNIPMYNEF 125 Query: 124 HEKRTFISG----YSNDPIVFRDIRLG----------------ILICEDIWKNSNICKHL 163 +E R F +G S D +F +I G ICED+W + Sbjct: 126 YEGRHFTAGPEVVTSVDFSIFGEIPFGANQLFSCESLPELVVAAEICEDLWVANPPSVAH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+ASP K + R +V+ Q + + +Y G+ +L+F G + Sbjct: 186 AMAGATLICNLSASPAIAGKAEYRRSLVSNQSARLVCGYLYAGSGEGESTTDLVFSGHNL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS---------DDSASTMYIPLQEE 272 + LA F++ ++E +++ +S D Y+ L E Sbjct: 246 ICENGHILA-DTGCFTDGIAVSEIDVASLVAERRRLSTFFVAPSPEDARHIVTYVALDFE 304 Query: 273 E---------------------ADYNACVLSLRDY-----VQKNNFHKVIIGLSGGIDSA 306 + A+ VLS++ + + +V++G+SGG+DS Sbjct: 305 DMTKLTRFVDPRPFVPASDDRRAERCEEVLSIQAHGLATRLAHTGSQRVVVGISGGLDST 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + V A L + + + +P T+ ++ +A A+ LG + + I V Sbjct: 365 LALLVTVRAFDQLGLDRGGIVAVTMPGFGTTDRTYTNAVRLARTLGAELREISITAAVRQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + E + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 HFIDIGH--DEANHDVTYENAQARERTQILMDVANQVRGMVIGTGDLSELALGWATYNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASW 443 + + KT V L + Sbjct: 483 QMSMYGVNASVPKTLVRHLVHY 504 >gi|255692263|ref|ZP_05415938.1| glutamine-dependent NAD+ synthetase [Bacteroides finegoldii DSM 17565] gi|260621994|gb|EEX44865.1| glutamine-dependent NAD+ synthetase [Bacteroides finegoldii DSM 17565] Length = 641 Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 126/553 (22%), Positives = 228/553 (41%), Gaps = 73/553 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +ILF E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIILFPEMSITGYTCGDLFSQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V + G I+ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVIVNSTVINAAVTIQKGKILGVTAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S R D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLRTETVRLCGQVVPIGANLLFETSDTTFGIEICEDLWATIPPGSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNMSADNEGIGKHSYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSASTM------------------ 265 LA Q + FS EQ ++E ++ ++ + +AS Sbjct: 246 GTLLA-QSERFSMEEQLVVSEIDVERIRAERRVNTTFAASQANLEGKRAIAIATEFVNSK 304 Query: 266 ------------YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E E ++ V L + ++G+SGG+DS L Sbjct: 305 ELNLTRKFNAHPFVPQDNELHEHCEEVFSIQVAGLTQRLVHTGAKTAVVGISGGLDSTLA 364 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHF 362 + V D LG ++ + I +P T+ ++ +A +LG + I D + HF Sbjct: 365 LLVCVKTFDKLGWSRKGILGITMPGFGTTDRTYHNAVNLMNSLGISIREISIKDACIQHF 424 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIDHDVNVHD---VTYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDH 481 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRPHQ 477 + + KT V L W +G+ + L + I P ++ + +++ Q Sbjct: 482 MSMYGVNAGVPKTLVKYLVQWVAKNGVDEESKATLLDIVDTPISPELIPADENGDIK--Q 539 Query: 478 TDQESLPPYPILD 490 ++ + PY + D Sbjct: 540 KTEDLVGPYELHD 552 >gi|307596131|ref|YP_003902448.1| NAD+ synthetase [Vulcanisaeta distributa DSM 14429] gi|307551332|gb|ADN51397.1| NAD+ synthetase [Vulcanisaeta distributa DSM 14429] Length = 289 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 136/274 (49%), Gaps = 20/274 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R YV+ +IGLSGG+DS++ A + V ALG++NV ++LPYK T P+ + DA Sbjct: 25 IRSYVRDAGASGAVIGLSGGVDSSVTAYLLVKALGRDNVIGLILPYKTTPPEDIRDAKYV 84 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG KY + I + N F + F +E I N+ RIR +L +N ++ Sbjct: 85 AETLGIKYYYIDIGRIRNAFAESIPGF--DESDKIAVGNLLPRIRMTLLYYFANRFNKVV 142 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 T +KSE+ +GY T YGD P+ DLYKTQV L + LG +P Sbjct: 143 AGTGDKSELLIGYFTKYGDGGVDILPIGDLYKTQVRYLGKY---------LG-----LPD 188 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYND--ETVRYVE 519 +I K S L QT + L Y +D I+ +V+ S + E V+ V Sbjct: 189 NIAFKPSSPRLWEGQTAEGELGVKYEDVDVILHALVDYRMSVEQAAEATGKPIELVQAVW 248 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + +E+KR+ P+ +++ ++ G D P++ Sbjct: 249 RRVLNTEHKRK-PPIVPRVSMRTLGIDWRMPVNK 281 >gi|332297495|ref|YP_004439417.1| NAD+ synthetase [Treponema brennaborense DSM 12168] gi|332180598|gb|AEE16286.1| NAD+ synthetase [Treponema brennaborense DSM 12168] Length = 679 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 129/571 (22%), Positives = 227/571 (39%), Gaps = 90/571 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + A A V D N ++A + G LI+F EL I+GY DL +++ + Sbjct: 6 FRAACASPAVTVADCVKNADAIIEQIQQAAQHGAALIVFPELSITGYTCGDLFLQRTLQR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++ + ++T GA +VG P + + N + G ++AV K +PNY+EF+ Sbjct: 66 SAVAQLERIAAETAGCGALSLVGLPLAADDTLYNCAAYVYGGEVVAVVPKTFIPNYAEFY 125 Query: 125 EKRTFISG----------------------------YSNDPIVFRDIR-----LGILICE 151 E+R F + D I+ RD+R + ICE Sbjct: 126 ERRHFSPAPDANAPDAACTRTEGKTVCLSQRFPAVPFGTD-ILIRDVRNRDAVIAAEICE 184 Query: 152 DIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ 211 D+W + + GA + +L+AS K + R +V Q + + +Y + G+ Sbjct: 185 DVWVPAAPSQRHALSGATVIANLSASNEIIGKAEYRRMLVQSQSARLQCAYLYADAGNGE 244 Query: 212 D--ELIFDGASFCFDGQQQLA--------FQMKHFSEQNFMTEWHYDQQLSQWNYMSD-D 260 +++F + + LA F + + E +Q + Sbjct: 245 STTDMVFAAHNIAAENGSVLAESELFGTGLIFADFDLELLLQERRRTGTFAQCARDAGVG 304 Query: 261 SASTMYIPL---QEEEAD----------------------YNACVLSLR-----DYVQKN 290 S ++Y+ L E EAD V+ L+ ++ Sbjct: 305 SYRSIYVDLPSRAEAEADELRYRRIDPHPFVPSGTRERTERCRRVVELQAEGLAKRLRHT 364 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 N +IGLSGG+DS L + +A L ++ + +P T+ ++ +A +K Sbjct: 365 NARTAVIGLSGGLDSTLALLVTAEAFRRCKLDPAGIEAVTMPCFGTTERTHRNAVRLSKR 424 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 L + +PI + V F+ + E + EN Q+R R ILM ++N + +++ T Sbjct: 425 LHTSFREIPIAEAVRQHFADIGH--DESVHDVTYENAQARERTQILMDVANKTGGLVIGT 482 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 + SE ++G+ T GD + + KT V L +W S L V+ IL Sbjct: 483 GDLSESALGWATYNGDHMSMYGVNSSVPKTLVRYLVAWFADEA-DSADAELAAVL-RDIL 540 Query: 466 EKSPSAELRP------HQTDQESLPPYPILD 490 + S EL P Q +E + PY + D Sbjct: 541 DTPVSPELLPPEDGAISQKTEELVGPYELHD 571 >gi|313113491|ref|ZP_07799080.1| NAD+ synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310624218|gb|EFQ07584.1| NAD+ synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 641 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 145/606 (23%), Positives = 247/606 (40%), Gaps = 83/606 (13%) Query: 10 AQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 A L+P V D A N+ + A +A +G+ L +F E ++GY DL +++ Sbjct: 9 AALSPALRVADCAYNVRQITDALHKAAARGVKLAVFPEFCLTGYTCGDLFLQRTLQTGAL 68 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 A+ TL +T +VG P + N +L G I+ + K LPNY EF+EKR Sbjct: 69 DALSTLLEETKALDVVTLVGLPLLVHGKLYNCAAVLCHGRILGLVPKTYLPNYGEFYEKR 128 Query: 128 TFISGYSNDPIV--------------FR-----DIRLGILICEDIWKNSNICKHLKKQGA 168 F G + +V FR LG+ ICED+W GA Sbjct: 129 QFTPGSTEVELVEVCGQQVPFGTSLLFRCRQMPSFVLGVEICEDLWSALPPSTFHALAGA 188 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC---- 222 + +L+AS K + R +V+ Q + + +Y + G+ +++F G Sbjct: 189 TVIANLSASDETVGKAEYRRALVSNQSARLLCGYLYASAGHGESTQDMVFAGHDLIAENG 248 Query: 223 --------FDG---QQQLAFQ-MKHFSEQNFMTEWHYDQ-QLSQWNYMSDDSASTMYI-- 267 FDG + ++ Q M+ +N E + Q +++ ++ T +I Sbjct: 249 TILAENAPFDGGCAETEIDCQRMEAERARNTSFELSGEGYQTVEFDLEPAETTLTRWIDP 308 Query: 268 -PLQEEEADYNA--CVLSLR---DYVQKNNFH----KVIIGLSGGIDSALCAAIAVDA-- 315 P + A C L L+ D + K H +IG+SGG+DS L +AV A Sbjct: 309 APFVPGDPKRRAERCELILKMQADGLAKRLDHAHAKTAVIGISGGLDSCLALLVAVRAMK 368 Query: 316 -LGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 LG+ +V + +P T+ ++ +A L + + I + V+ F+ + Q E Sbjct: 369 QLGRPARDVLAVTMPCFGTTKRTRSNAEILCDELQVSFKEIDIANTVHSHFADIGQ--DE 426 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 + EN Q+R+R LM +N + +++ T + SE+++G+ T GD + + Sbjct: 427 SVLDVTFENGQARVRTLELMDTANRTGGLVVGTGDLSELALGWATYNGDHMSMYGVNAGV 486 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLPPY 486 KT V L + T L + IL+ S EL P Q ++ + PY Sbjct: 487 PKTLVRHLVRYEADIAATDAL----RTVLLDILDTPVSPELLPAKDGEIAQKTEDLVGPY 542 Query: 487 PILDDII----------KRIVENEESFINNDQEYNDET----VRYVEHLLYGSEYKRRQA 532 + D + +I ++ EY D +R + ++KR Sbjct: 543 ELHDFYLYQVLRFGFGPAKIFRLAKTAFAGRPEYPDSVLYKWLRNFYWRFFAQQFKRSCL 602 Query: 533 PVGTKI 538 P G K+ Sbjct: 603 PDGPKV 608 >gi|317050601|ref|YP_004111717.1| NAD+ synthetase [Desulfurispirillum indicum S5] gi|316945685|gb|ADU65161.1| NAD+ synthetase [Desulfurispirillum indicum S5] Length = 632 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 142/611 (23%), Positives = 244/611 (39%), Gaps = 86/611 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ML +IA A V D+A N A+ A++Q +++F EL ++GY DL ++ Sbjct: 1 MLGFYRIATALPGLRVADVAWNRAQIEELAIRAHQQQCAVVVFPELSLTGYTCADLFHQE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +QA A+++L + + +VVG P Q + N +++ G+I+ K +LPN Sbjct: 61 SLLQAVRKALESLCRFSRELDTALVVGAPLPQQGRLYNCALVIQRGHILGAVPKTHLPNK 120 Query: 121 SEFHEKRTFISGYS----------------NDPIVFR---DIRLGILICEDIWKNSNICK 161 EF+E+R F + ++FR I +CED+W Sbjct: 121 REFYERRWFTPASALPENSTITIGDDSVPFGSRLIFRCDQHYAFAIELCEDLWSVIPPSS 180 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA + + +AS K R E+V Q + Y G+ +L+F G Sbjct: 181 SHALAGATVILNPSASNELVAKADYRRELVQNQSARCLAAYAYAGSGIGESSTDLLFGGH 240 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYD-QQLSQWNY----MSDDSASTMY--IPL--- 269 + L + F N + D Q+LSQ +D+ T Y IPL Sbjct: 241 HLLCENGLVLE-ESPRFERGNHLFSADVDCQKLSQLRMSETSFADNPIPTGYRTIPLHPV 299 Query: 270 ------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + E ++ +L ++ K IIG+SGG+DS Sbjct: 300 LPIGELQRYIPPHPFVPGDPQRRDERCEEIFSIQTAALAKRLKHIGSPKAIIGISGGLDS 359 Query: 306 ALCAAI-----AVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + A+ ++ I +P T+ ++ E+A KAL + + I Sbjct: 360 TLALLVTHRTFALLERNPSDIIAITMPGFGTTNRTYENAVTLCKALETDFREIAISQASL 419 Query: 361 HFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F L+ +P+ + EN+Q+R R ILM ++N +++ T + SEI++G+ T Sbjct: 420 EHFKLIGH----DPAIHDVTYENVQARERTEILMNIANKHGGIVIGTGDLSEIALGWSTY 475 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV----IPPSILEKSPSAELR 474 GD ++ + KT + L W S + L ++ I P +L + E Sbjct: 476 NGDHMSMYSVNCGVPKTLIRYLVEWVASRSEDAMEELLMDIVNTPITPELLPRDEQKECT 535 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET--VRYVEHLLYGSEYKRRQA 532 Q ++ + PY E + F+ + +Y T VR++ L + +Y Sbjct: 536 --QKTEDIIGPY-----------ELHDFFLYHTVKYGASTPKVRHLAALAFAGKYDEASI 582 Query: 533 PVGTKITAKSF 543 +I K F Sbjct: 583 ARWHEIFVKRF 593 >gi|148378539|ref|YP_001253080.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A str. ATCC 3502] gi|153932876|ref|YP_001382927.1| NAD synthetase [Clostridium botulinum A str. ATCC 19397] gi|153935328|ref|YP_001386356.1| NAD synthetase [Clostridium botulinum A str. Hall] gi|148288023|emb|CAL82090.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A str. ATCC 3502] gi|152928920|gb|ABS34420.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A str. ATCC 19397] gi|152931242|gb|ABS36741.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A str. Hall] Length = 638 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 141/623 (22%), Positives = 247/623 (39%), Gaps = 96/623 (15%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I ++ PV V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIDNIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I +G P + + N V++ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAIGSPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N P ++F D + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM------------- 265 L + K F +N + D ++L ++ + + Sbjct: 248 NGSILK-ENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAIND 306 Query: 266 ------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P EE+ +N +L + N K +IG+SGG+DS L Sbjct: 307 VGDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTL 366 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + K EN+ TI +P T+ ++ +A + K L + I D Sbjct: 367 ALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQH 426 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 427 FKDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDH 484 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 ++ + KT V L + + + ++E++ IL+ S EL P Sbjct: 485 MSMYSVNCSIPKTLVRYLVRYVAENEVAK---EISEIL-IDILDTPVSPELLPKDKEGNI 540 Query: 477 -QTDQESLPPYPILD-------------DIIKRI--VENEESFINNDQEYNDETVRYVEH 520 Q ++ + PY + D D IK++ + ++S+ D+E D+ Y Sbjct: 541 VQKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSY---DKETIDKWFSYFIR 597 Query: 521 LLYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ S Sbjct: 598 RFFTQQFKRSAVPDGPKVGTISL 620 >gi|189218737|ref|YP_001939378.1| NAD synthetase [Methylacidiphilum infernorum V4] gi|189185595|gb|ACD82780.1| NAD synthetase and glutamine amidotransferase [Methylacidiphilum infernorum V4] Length = 670 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 127/534 (23%), Positives = 219/534 (41%), Gaps = 84/534 (15%) Query: 26 ARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIV 85 A R+ A+++ L++F EL +S Y EDL + + ++ A++ L +T + Sbjct: 15 AELCRQAADKKAT-LVVFPELCLSAYSCEDLFHQSALLEVSLRALEYLLEETAPLSLLTL 73 Query: 86 VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF---------------- 129 VG P + + + N + G I+ V K LPNY EF+E R F Sbjct: 74 VGLPLRVNQLLYNCGCLFSRGKILGVIPKSYLPNYREFYESRQFSQAALATEEYVDLLGQ 133 Query: 130 ---------ISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 I + P+ +L I ICED+W GA L +L+AS Sbjct: 134 KAIPFGTNLIFEWEQQPL----FKLAIEICEDLWVPLPPSSFAALAGATVLVNLSASNIT 189 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLA-------- 230 K R +V Q IY G+ +L +DG ++ +LA Sbjct: 190 IGKSDYRKLLVASQSGRCISAYIYSAAGFGESTTDLAWDGEGLIYENGTKLAETRRFAYD 249 Query: 231 ------------FQMKHFSEQNF-MTEWHYDQQLSQWNYMS---DDSASTMYI------- 267 Q + +F T+ H+ +++S + ++ D + ++ + Sbjct: 250 SQLVFADVDLDRLQADRMRQNSFGQTKVHFKKEISSFKTLTFSLDVNKESILLLERVLER 309 Query: 268 -------PLQEEEADYNACVLSLRDYVQK---NNFHKVIIGLSGGIDSA---LCAAIAVD 314 PL ++ + + +Q+ + K +IG+SGG+DSA + A A+D Sbjct: 310 FPYVPSDPLTRDQRCQEVYAIQTQGLIQRLKATSIRKTVIGISGGLDSAHALIVCAKAMD 369 Query: 315 ALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ- 371 LG ++N+ +P T+ ++LE A +A GC+ + I F + Sbjct: 370 ILGFPRQNILACTMPGFATTKKTLEQARRLIEATGCREYFIDIRPSCMQLFKDIGHPFAR 429 Query: 372 -EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPL 429 E+ + EN+Q+ R N L L+N A+++ TS+ SE+++G+ T GD ++ Sbjct: 430 GEKLYDVTFENVQAGERTNHLFRLANFENALVVGTSDLSELALGWSTYGVGDHMAHYHVN 489 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + KT + L W + T LG + IL+ S EL P + QE L Sbjct: 490 ASVPKTLIKFLIRWVSK---TQELGEKVSEVLDEILDTVISPELIPGENAQEPL 540 >gi|268679972|ref|YP_003304403.1| NAD+ synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268618003|gb|ACZ12368.1| NAD+ synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 267 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 120/229 (52%), Gaps = 25/229 (10%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 N + L+ V+K F VI+G+SGG+DSA+ A +A A KEN +MLP +S SL Sbjct: 21 NHLITFLQHEVKKAGFSNVIVGISGGVDSAVVAVLAQKAF-KENFLALMLPSSTSSKASL 79 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--SGIVAENIQSRIRGNILMAL 394 E A + + + +PI L +F +P S + N +R+R +L + Sbjct: 80 EHATELCEKFAIRVERIPIGALAESYF-------HNDPHASKLRIGNFCARMRMAVLYDI 132 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + A++L TSNKSEI +GYGT++GD++ NP+ +L KT++F A LG Sbjct: 133 AAREHALVLGTSNKSEILLGYGTIFGDLACALNPIGELLKTEIFAFAEH---------LG 183 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES 502 +P SIL K+PSA+L Q D+E Y +D ++ ++ +S Sbjct: 184 -----VPSSILNKAPSADLWEGQKDEEEFGFSYAQIDKVLLTYLKEHKS 227 >gi|315638188|ref|ZP_07893370.1| NAD(+) synthase [Campylobacter upsaliensis JV21] gi|315481724|gb|EFU72346.1| NAD(+) synthase [Campylobacter upsaliensis JV21] Length = 249 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 133/241 (55%), Gaps = 24/241 (9%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 VI+GLSGGIDSAL A + AL K+ V +++P ++++ +L+DA + L KY ++ Sbjct: 26 VILGLSGGIDSALVATLCKKAL-KDEVFALLMPTQHSNEANLKDALKLCEDLNLKYKIIN 84 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I ++ F E + I N +RIR ++L S +++ TSNKSE+ +G Sbjct: 85 IETILQAFLKE-----SEMTNQIRTGNYAARIRMSLLYDYSALKNYLVVGTSNKSELMLG 139 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 YGT+YGD++ FNP+ LYK++++ LA + N + + L+K+PSA+L Sbjct: 140 YGTIYGDLACAFNPIGKLYKSEIYTLAKYLN--------------LDANFLQKAPSADLW 185 Query: 475 PHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 +Q+D+E L Y ++D+ ++ + +N+ I+ + N + ++ + +KR P Sbjct: 186 ENQSDEEDLGFSYALIDEGLRALEKNDALQIS---KLNPRLISMLQKRTKQNAFKRVMPP 242 Query: 534 V 534 + Sbjct: 243 I 243 >gi|323448856|gb|EGB04749.1| hypothetical protein AURANDRAFT_55011 [Aureococcus anophagefferens] Length = 736 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 135/562 (24%), Positives = 224/562 (39%), Gaps = 92/562 (16%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 +GD N A + A G +F EL + GY +DL+ + + ++ A+ LK+ Sbjct: 31 LGDPLRNAAAIGELYDRAVADGSSCCVFPELCVCGYALDDLLQQDAILRETLEALALLKA 90 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--- 132 T G A +VVG P + + N V+L G + V K LPN+ EF+E R F+SG Sbjct: 91 RTAPGKALLVVGAPLRVDGRLYNCAVVLHGGRALGVIPKSYLPNFREFYEARQFVSGRER 150 Query: 133 -----------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLKKQGAEF 170 + D +VFR D +G+ +C+D+W +GA Sbjct: 151 CCGDVLPGTFLGEAGVPFRAD-VVFRCAENADFCVGVEVCQDVWVPVPPSTFQAFRGATV 209 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ--DELIFDGASFCFDGQQQ 228 L +L+AS +K + RH +V S + +Y + G+ ++L +DG + ++ Sbjct: 210 LCNLSASNITIDKSRYRHALVASMSSKNYCAYLYTSAGAGESTNDLAWDGQAVIYECGDL 269 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQ----------WNYMSDD------------------ 260 L + + F++ H D L + W+ D Sbjct: 270 LG-ESERFADDVRGQALHGDVDLGRVAQDRSRDMTWSQNGRDFRDLVEKVRVVDFSLVPG 328 Query: 261 ---------SASTMYIP-----LQEEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 A Y+P L E + YN V L ++ + K++IG+SGG+DS Sbjct: 329 GSHGLGFRRVAKRPYVPSDPATLAERCYECYNIQVSGLAQRMRASGLKKLVIGVSGGLDS 388 Query: 306 A---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L A+D LG + N +P T+ + A + LG + L I Sbjct: 389 THALLVCCQALDKLGLPRSNCLAYTMPGFATTAATKSYALELMRCLGVTAETLDITPSCE 448 Query: 361 HFFSLMSQFLQEEPSG-----IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + G + EN+Q+ R N L L+NH A ++ T + SE+++G+ Sbjct: 449 VMLGDLGHAYAAGERGRAVYDVTFENVQAGERTNHLFRLANHKGAFVVGTGDLSELALGW 508 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD + + K+ + + W S +G + SIL S EL Sbjct: 509 CTYGVGDHMSHYCVNASVPKSLIQCVIQWVISSDF---VGAEANAVLTSILAVEISPELV 565 Query: 475 PH------QTDQESLPPYPILD 490 P Q+ +++L PY + D Sbjct: 566 PQEDGEAMQSTEDALGPYDLHD 587 >gi|71483021|gb|AAZ32455.1| NH(3)-dependent NAD+ synthetase [uncultured euryarchaeote Alv-FOS1] Length = 264 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 83/238 (34%), Positives = 122/238 (51%), Gaps = 21/238 (8%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV++GLSGG+DSA+ + +LG E V + +P T + EDA AK ++ + Sbjct: 27 KVVVGLSGGLDSAVVLKLCAMSLGPERVLAVHMPDSVTPEEESEDARNVAKEAEVEFREI 86 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I D V + + E SG VA N+++R+R ++L ++N ++ TSNKSE+ Sbjct: 87 RIDDAVETIADMAAL----ESSGAVA-NLKARVRMSVLFGIANQESRLVAGTSNKSELLT 141 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY T YGD + F P+ DLYKTQV LA IP IL+K+PSA L Sbjct: 142 GYFTKYGDGASDFAPIGDLYKTQVRALAEKIG--------------IPERILKKAPSANL 187 Query: 474 RPHQTDQESLP-PYPILDDIIKRIVEN-EESFINNDQEYNDETVRYVEHLLYGSEYKR 529 P QTD+ L Y LD+++ I N + I E+++ V + L S +KR Sbjct: 188 LPGQTDEAELGVDYDTLDEVLHGIELNLTPAEIMEIGEFDEALVSKIYALYLKSRHKR 245 >gi|170756133|ref|YP_001780184.1| NAD synthetase [Clostridium botulinum B1 str. Okra] gi|169121345|gb|ACA45181.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum B1 str. Okra] Length = 638 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 140/623 (22%), Positives = 247/623 (39%), Gaps = 96/623 (15%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I ++ PV V DI NI ++ + + LI+F EL I+ Y +L + + Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLMS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I +G P + + N V++ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAIGAPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N P ++F D + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTM------------- 265 L + K F +N + D ++L ++ + + Sbjct: 248 NGSILK-ENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAIND 306 Query: 266 ------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P EE+ +N +L + N K +IG+SGG+DS L Sbjct: 307 VGDFDRPIDKYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTL 366 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + K EN+ TI +P T+ ++ +A + K L + I D Sbjct: 367 ALLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQH 426 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 427 FKDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDH 484 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 ++ + KT V L + + + ++E++ IL+ S EL P Sbjct: 485 MSMYSVNCSIPKTLVRYLVRYVAENEVAK---EISEIL-IDILDTPVSPELLPKDKEGNI 540 Query: 477 -QTDQESLPPYPILD-------------DIIKRI--VENEESFINNDQEYNDETVRYVEH 520 Q ++ + PY + D D IK++ + ++S+ D+E D+ Y Sbjct: 541 VQKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKITFKDSY---DKETIDKWFSYFIR 597 Query: 521 LLYGSEYKRRQAPVGTKITAKSF 543 + ++KR P G K+ S Sbjct: 598 RFFTQQFKRSAVPDGPKVGTISL 620 >gi|240170907|ref|ZP_04749566.1| NAD synthetase [Mycobacterium kansasii ATCC 12478] Length = 680 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 133/568 (23%), Positives = 238/568 (41%), Gaps = 92/568 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + + G+ L +F EL +SGY ED++ + + + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLGLARQCHDDGVALAVFPELTLSGYSIEDILMQDALLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + + D +VVG P + + + N+ V++ G+++ V K LP Y EF+ Sbjct: 72 AVEDALLDVVAQSADLLPVLVVGAPLRYRHRIYNTAVVVHRGSVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISG---YSNDPIVFRDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R +G + I D+ G + ICED++ Sbjct: 132 EQRQVAAGDDERGSVRICGSDVPFGPDLLFTASDLPGFVLHVEICEDMFVPVPPSAEASL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + S +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRCLLARSASSRCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS----DD-------SASTM------- 265 + LA Q + F + + D +L + + DD +A + Sbjct: 252 ENGVLLA-QSERFPKGERRSVADVDTELLRSERLRMGTFDDNRRHHRAAAESFRRIEFRV 310 Query: 266 -----------------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 311 DPPTGDIGLRRTVERFPFVPADPRRLQQDCYEA-YNIQVSGLEQRLRALHYPKVVIGVSG 369 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T ++ +A A+ALG ++ + I Sbjct: 370 GLDSTHALIVAARAMDREERPRSDILAFTLPGFATGERTKTNAVKLARALGATFEEIDIR 429 Query: 357 DLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D S M E+ + EN+Q+ +R + L ++N ++L T + SE+ +G Sbjct: 430 DTAALMLSEMGHPFARGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELGLG 489 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPL------TEVIPP 462 + T GD +N + KT + L W ITSG +G + TE+ P Sbjct: 490 WSTYGVGDQMSHYNVNAGVPKTLIQHLIRWV----ITSGEFDEHVGEVLQSVLDTEITP- 544 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILD 490 E PS E Q+ + + P+ + D Sbjct: 545 ---ELVPSGEEEELQSSEAKVGPFALQD 569 >gi|118580580|ref|YP_901830.1| NAD synthetase [Pelobacter propionicus DSM 2379] gi|118503290|gb|ABK99772.1| NAD+ synthetase [Pelobacter propionicus DSM 2379] Length = 689 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 136/568 (23%), Positives = 227/568 (39%), Gaps = 91/568 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D A N + +A Q + +F EL +S Y +DL +++ + Sbjct: 14 IRAAVAVPEVKVADPAHNAGQTIAMMRQAWEQSALIAIFPELGLSAYSCDDLFHQQTLLD 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+D + + D VVG P Q + N V+L G I+ V K LP Y EF+ Sbjct: 74 GSMDALDAVLKASMDIPVITVVGLPLQVHSMLFNCAVVLYRGRILGVAPKSFLPGYREFY 133 Query: 125 EKRTFI-SGYS---------------NDPIVFRDIRLGIL-----ICEDIWKNSNICKHL 163 E R F+ + Y+ + ++F+ +L ICED+W Sbjct: 134 ELRQFVPAAYAPVEKIDLLGQQGIPFGNRLLFQVEEQPLLTFYTEICEDVWVPIPPSSFA 193 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA L +L+AS K R +V Q +Y G+ +L +DG Sbjct: 194 ALAGASVLINLSASNITVGKADYRRSLVANQSGRCLSAYLYSAAGIGESTTDLAWDGHGM 253 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC-- 279 F+ L + K FS ++ M D M S + ++E A + Sbjct: 254 IFENGACLG-ETKRFSYESQMIFADIDLDRLAQERMRQTSYGQSVLRHRDEVAGFRTVRF 312 Query: 280 --------VLSLRDYVQKNNF--------------------------------HKVIIGL 299 VL L + ++ F K++IG+ Sbjct: 313 SASLPRERVLPLERFYERFPFVPSDPSRRDERCKEVYEIQVQGLVKRFKATGADKMVIGV 372 Query: 300 SGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY---D 351 SGG+DS L A A+D +G + ++ +P TS ++LE A + +GC Y D Sbjct: 373 SGGLDSTQALLVCARAMDVMGLSRMHILAYTMPGFATSQRTLEQARELIRTVGCTYHEID 432 Query: 352 VLP-----IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 + P + D+ + FF + I EN+Q+ R + L L+N + +++ TS Sbjct: 433 IRPSCLQMLQDIGHPFFHGKPVY------DITFENVQAGERTSHLFRLANQTGGLVVGTS 486 Query: 407 NKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 + SE+ +G+ T GD ++ + KT + L W +T LGP + +L Sbjct: 487 DLSELGLGWCTYGVGDHMAHYHVNASVPKTLIQYLIRWA---ALTHQLGPEVSTVLMDVL 543 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDII 493 E S EL P + D++ P +D++ Sbjct: 544 ETEISPELVPGKEDEDQ--PVQRTEDVV 569 >gi|27379658|ref|NP_771187.1| NAD synthetase [Bradyrhizobium japonicum USDA 110] gi|27352810|dbj|BAC49812.1| glutamine-dependent NAD(+) synthetase [Bradyrhizobium japonicum USDA 110] Length = 677 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 121/536 (22%), Positives = 219/536 (40%), Gaps = 88/536 (16%) Query: 34 NRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ 93 + Q + +F EL +SGY EDLV + + A + + + ++VG P + Sbjct: 41 HEQSAAVAVFPELCLSGYAIEDLVKQDPLLDAVERGLAAIVEASDALMTVLIVGAPLRFG 100 Query: 94 EGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFIS--GYSNDPIVFRDIR------- 144 + N V++ GN++ V K LP Y EF+E R F S G + + IVF + Sbjct: 101 HRIYNCAVVIHRGNVLGVVPKSYLPTYREFYEGRHFASGAGIAGETIVFGGLHAPFGVDL 160 Query: 145 -----------LGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTG 193 +G+ ICED+W L GA L +L+ SP + + R + Sbjct: 161 LFAAEDVPGLTIGVEICEDMWIPVTPASELALAGASVLINLSGSPITIGRARSRALLCQS 220 Query: 194 QISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG-------------------------- 225 + +Y G+ +L +DG + ++ Sbjct: 221 TSARCLAAYVYSAAGAGESTTDLAWDGQTSIYENGVLLAEGERFRQGGQITFADVDLDLL 280 Query: 226 ---------------QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ 270 Q++ F+ F+ + ++ + +++ ++ ++ D + L Sbjct: 281 RQERALMGTFDDNRRQREAFFRKVTFALKPPASDIGFLRKVERFPFVPSDES------LL 334 Query: 271 EEEA--DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQT 323 E++ YN V L ++ +V+IG+SGG+DS + AA AVD LG +EN+ Sbjct: 335 EQDCYEAYNIQVAGLVQRMRATGTKRVVIGVSGGLDSTHALIVAAKAVDLLGLPRENILA 394 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAEN 381 +P T +S +A A K+L + L I + E+ + EN Sbjct: 395 YTMPGFATGSESKTNALALMKSLQTNWQELDIRTTATQMLKDIGHPFGKGEKVYDVTFEN 454 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQL 440 +Q+ +R + L L+NH +++ T + SE+++G+ T GD +N + KT + L Sbjct: 455 VQAGLRTDYLFRLANHHGGIVIGTGDLSELALGWCTYGVGDQMAHYNVNAGVPKTLIQHL 514 Query: 441 ASW-----RNSHGITSGLGP-LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILD 490 W + S + L L+ I P ++ P + Q+ + S+ PY + D Sbjct: 515 IRWVIASQQFSDDVNRTLASILSAEISPELVPVKPGEK---PQSTEASVGPYELQD 567 >gi|296129628|ref|YP_003636878.1| NAD+ synthetase [Cellulomonas flavigena DSM 20109] gi|296021443|gb|ADG74679.1| NAD+ synthetase [Cellulomonas flavigena DSM 20109] Length = 686 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 139/612 (22%), Positives = 249/612 (40%), Gaps = 114/612 (18%) Query: 37 GMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV 96 G+ + + EL +SGY +DL + + A A+ T+ + + IVVG P V Sbjct: 44 GVAVAVMPELCLSGYAVDDLFLQDVLLDAVRDALATIVEASRELLPVIVVGAPLAHGTRV 103 Query: 97 LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG---YSNDPIVFRDIRLG------- 146 LN+ V++ G ++ V K LP Y EF+E+R F G + +++ +G Sbjct: 104 LNTAVVVHRGRVLGVAPKSYLPTYREFYERRWFAPGDDVRGTTTVAGQEVPIGPDLLFAA 163 Query: 147 ---------ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 + +CED+W H GA L +L++SP + ++R +V + + Sbjct: 164 ADLPGLVLHVEVCEDMWVPVPPSTHAALAGATVLVNLSSSPVTVGRAEERRLLV--RSAS 221 Query: 198 VHLPIIYVNQVGGQDE----LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD-QQLS 252 YV GQ E L +DG + ++ + LA + K F++ +T D +L Sbjct: 222 ARCLAAYVYAAAGQGESSTDLAWDGQTLVYELGELLA-EGKRFADGQVLTVADVDLDRLR 280 Query: 253 QWNYMS---DD------------SASTMYIPLQEEEAD---------------------- 275 Q + DD S T+ L+ D Sbjct: 281 QERLRTGTFDDNRRALGLAAAGGSHRTVPFTLEPPPGDVGLRRAVDRFPFVPDDPARLAL 340 Query: 276 -----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIM 325 YN V +L ++ K++IG+SGG+DS + AA A+D LG + ++ Sbjct: 341 DCYESYNIQVSALEQRLRAVGGAKIVIGVSGGLDSTHALIVAARAMDRLGRPRSDILAFT 400 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQ 383 +P TS +L A A ++LG + + I + + E E + EN+Q Sbjct: 401 MPGFATSDATLASALALMQSLGTTAETIDIRPAARQMLADLGHPAGEGAEQYDVTFENVQ 460 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLAS 442 + +R + L +N ++L T + SE+++G+ T GD + + KT + L Sbjct: 461 AGLRTDYLFRAANQRGGIVLGTGDLSELALGWCTYGVGDQMSHYGVNAGVPKTLIQHLIR 520 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLPPYPILDDIIKRI 496 W G T + ++ + S EL P Q+ ++++ PY + D + ++ Sbjct: 521 WVVGEG---HFDDATNEVLLRVVGQEISPELVPVREGERMQSTEDTIGPYALHDFALFQV 577 Query: 497 VE-----NEESFI-------------------NNDQEYNDETV-RYVEHLL---YGSEYK 528 + + +F+ + EY+ TV R++E + + S++K Sbjct: 578 LRHGMRPSRIAFLAWHAWHDARAGAWPPGWPADRRPEYDLPTVRRWLEVFVRRFFASQFK 637 Query: 529 RRQAPVGTKITA 540 R P G K+ A Sbjct: 638 RSALPNGPKVAA 649 >gi|302874477|ref|YP_003843110.1| NAD+ synthetase [Clostridium cellulovorans 743B] gi|307690916|ref|ZP_07633362.1| NAD synthetase [Clostridium cellulovorans 743B] gi|302577334|gb|ADL51346.1| NAD+ synthetase [Clostridium cellulovorans 743B] Length = 634 Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 147/616 (23%), Positives = 245/616 (39%), Gaps = 92/616 (14%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I ++ PV VGDI N + E A + I+F EL ++ Y DL + I Sbjct: 4 IKVSSACPVTKVGDIKYNYEEIVHCIESAAAENSKAIVFPELALTSYTCGDLFTHNTLIS 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + I+ L + + + VG P + +LN ++ G I+ + K +PNYSEF+ Sbjct: 64 QALTYIEKLIEASKNKDILVAVGSPFLYKSRLLNCCFVIFEGKILGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGY------------SNDPI----VFR--DIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G N P+ +F+ G ICED+W +L Sbjct: 124 EKRWFSEGIDLKSKLIDLPFQKNIPLGTDLIFKCGSASFGFEICEDLWVTIPPSSYLALG 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIY---------VNQVGGQDELIFD 217 GA + +L+AS K R +V Q IY + + G LI + Sbjct: 184 GANIIGNLSASNEIIGKANYRRNLVENQSGRCICSYIYSSSGVHESSTDILFGGHLLISE 243 Query: 218 GASFC----------------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS 261 AS D + ++K+ S ++ D + ++Y S D Sbjct: 244 NASLLKENKRFQRDNEIISAIIDLDKLNTERLKNISFRDNSKVLDLDFKEINFSYKSLDF 303 Query: 262 AST-------MYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++P +E N L ++ N K IIG+SGG+DS L Sbjct: 304 GTFDRYINPHPFVPGNPKEMKERCTEILNIQAAGLAKRIEHTNLKKAIIGISGGLDSTLA 363 Query: 309 AAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V + EN+ TI +P T+ ++ +A K LG + + I F Sbjct: 364 LLVIVRTFELLNIPMENIITITMPGFGTTDRTYNNAIDLCKGLGTTFREINIVAAALQHF 423 Query: 364 SLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 S + +PS + EN+Q+R R ILM L+N +L+ T + SE+++G+ T GD Sbjct: 424 SDIGH----DPSIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGFCTYNGD 479 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD-- 479 ++ + KT V L + H + I IL+ S EL P D Sbjct: 480 HMSMYSVNTSVPKTLVRYLVRYVADHLSNDNI----RKILLDILDTPVSPELLPKDKDGK 535 Query: 480 -----QESLPPYPILDDII----KRIVENEE-----SFINNDQEYNDETVRYVEHLL--- 522 ++ + PY + D + ++ E E+ D+ +DE ++++ + Sbjct: 536 IAQKTEDIVGPYELHDFFLYYFMRQGAEREKIHFLAKVAFKDKYTDDEITKWLDKFIFRF 595 Query: 523 YGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 596 FTQQFKRSALPDGPKV 611 >gi|293374266|ref|ZP_06620594.1| NAD+ synthetase [Turicibacter sanguinis PC909] gi|325844815|ref|ZP_08168267.1| NAD+ synthase [Turicibacter sp. HGF1] gi|292647099|gb|EFF65081.1| NAD+ synthetase [Turicibacter sanguinis PC909] gi|325489002|gb|EGC91390.1| NAD+ synthase [Turicibacter sp. HGF1] Length = 641 Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 150/642 (23%), Positives = 265/642 (41%), Gaps = 93/642 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + VG+ N+ +A E A ++ + +++F EL +SGY DL+ + +Q Sbjct: 7 IKVGTSSPRVSVGNPIANVEVMLKALEVAKQKQLGILVFPELSVSGYTCGDLLLQTYLLQ 66 Query: 65 ACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + AI+ L + + DG +VVG P + N V++ I+ + K LPN SEF Sbjct: 67 DVNRAIELLLEKNPFDGI--VVVGAPISIHRNLYNCAVVIQKNEILGIIPKYYLPNDSEF 124 Query: 124 HEKRTFISG-----------YSNDPIVFRD---------IRLGILICEDIWKNSNICKHL 163 +E R F G Y N + F D + + IC D+W S+ L Sbjct: 125 YEGRWFTRGHEIVRHFDEINYLNRTVPFGDLIFENELHNVSFAVEICLDLWVASSPSSRL 184 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIY------------------- 204 GA+ + +L+ S K + R ++V Q S + +Y Sbjct: 185 ALNGADIILNLSTSNELFQKSRYRRDLVRVQSSKLVSGYVYCSSGVYESTTDGVFSGHSI 244 Query: 205 VNQVG---------GQDELIF-----DGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ 250 ++Q+G +DEL D + F+ ++ F+ ++ + Sbjct: 245 ISQIGEILTESELFSRDELNMTIADIDVSRIQFNRRRSTPFRQSGEDNMAYVQRVPFTLV 304 Query: 251 LSQWNYMSDDSASTMYIPLQEEEADY----NACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++ T ++P EE+ + N V L + ++IG+SGG+DS Sbjct: 305 VNDEYTFEKPLDETPFVPKVEEKESFEEIMNIQVAGLAKRMIHTKAQTLLIGVSGGLDST 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK-YDVLPIHDLVN 360 L +A L ++N+ + TS ++ +A K LG +D+ +++ Sbjct: 365 LALLLAAKTFDLINLPRKNIIAYTIRGFGTSNRTNTNANNLMKTLGVTHHDIDLRESVLS 424 Query: 361 HFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 HF + + +P+ I EN Q+R R NILM L+N ++L T N SE+++G+ T Sbjct: 425 HF-----KTIGHDPNQVDITYENAQARERTNILMNLANKMNGLVLGTGNMSELALGWCTY 479 Query: 419 YGDMSGGFNPLKDLYKTQV-FQLASWR--NSHGITSGL--GPLTEVIPPSILEKSPSAE- 472 GD + + KT V F + + S +T+ L + IL+ S E Sbjct: 480 NGDHMSMYAINAGVPKTLVKFMVKQFMLLESATLTNNAEDAELLQYTLADILDTPISPEL 539 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEES-----------FINN-DQEYNDETVRYVEH 520 L Q +E + Y I D I+ ++ N ++ F ++ D+E E ++ Sbjct: 540 LNTEQNTEEIIGKYEIHDFILYHMLNNGDTEDRIFDLMKIAFKDDFDEEKLLEYLQIFYR 599 Query: 521 LLYGSEYKRRQAPVGTKITAKSFG--RDRLYPISNKFRDHIS 560 Y ++KR P G K+ S D P ++R +S Sbjct: 600 RFYSQQFKRSALPDGPKVLDISLSPRTDWRMPSDAEYRRRLS 641 >gi|57242097|ref|ZP_00370037.1| NAD+ synthetase [Campylobacter upsaliensis RM3195] gi|57017289|gb|EAL54070.1| NAD+ synthetase [Campylobacter upsaliensis RM3195] Length = 249 Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 133/241 (55%), Gaps = 24/241 (9%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 VI+GLSGGIDSAL A + AL K+ V +++P ++++ +L+DA + L KY ++ Sbjct: 26 VILGLSGGIDSALVATLCKKAL-KDEVFALLMPTQHSNEANLKDALKLCEDLNLKYKIIN 84 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I ++ F E + I N +RIR ++L S +++ TSNKSE+ +G Sbjct: 85 IETILQAFLKE-----SEMTNQIRTGNYAARIRMSLLYDYSALKNYLVVGTSNKSELMLG 139 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 YGT+YGD++ FNP+ LYK++++ LA + N + + L+K+PSA+L Sbjct: 140 YGTIYGDLACAFNPIGKLYKSEIYTLAKYLN--------------LDVNFLQKAPSADLW 185 Query: 475 PHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 +Q+D+E L Y ++D+ ++ + +N+ I+ + N + ++ + +KR P Sbjct: 186 ENQSDEEDLGFSYTLIDEGLRALEKNDTLQIS---KLNPRLISMLQKRTKQNAFKRVMPP 242 Query: 534 V 534 + Sbjct: 243 I 243 >gi|281358389|ref|ZP_06244871.1| NAD+ synthetase [Victivallis vadensis ATCC BAA-548] gi|281315216|gb|EFA99247.1| NAD+ synthetase [Victivallis vadensis ATCC BAA-548] Length = 633 Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 121/483 (25%), Positives = 204/483 (42%), Gaps = 80/483 (16%) Query: 9 IAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A PV V D+ N+++ EA + ++F EL ++GY DL F++ ++ Sbjct: 7 LAAAVPVIRVADVEFNLSQMLECYREACVKQAAAVVFPELSVTGYSCGDLFFQERLLERA 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 SA T G + GFP + EG+ N + G I + K LPNY EF+EK Sbjct: 67 ESAAAGFAKATAGQGTVAIFGFPLKFGEGIYNVAAVAQNGMIRGLVPKSLLPNYREFYEK 126 Query: 127 RTFISGYS---------NDPIVF---------RDIRLGILICEDIWKNSNICKHLKKQGA 168 R F SG P+ F R R + +CED+W L GA Sbjct: 127 RHFRSGAKVAGELVRIDRRPVPFGSDLWFDGGRGFRFAVELCEDLWGVRPPSSGLALAGA 186 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFD 224 +F+L+A +K R ++V Q + YV G E ++F G + D Sbjct: 187 RAIFNLSAGTELASKAAYRRDLVKQQSARCL--AAYVLASAGVHESTSDVVFGGHALIAD 244 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTMYIPLQEEEA---- 274 +LA + + F N + D + S+ ++ ++ +Y ++ EEA Sbjct: 245 -NGRLAAENRRFDRGNSVIYADVDFGRLGAARCSESSFNDNEPLDRVYRRVELEEAAGSP 303 Query: 275 ----DYNA---------------CV-------LSLRDYVQKNNFHKVIIGLSGGIDSALC 308 YN C+ L ++ + ++IG+SGG+DS L Sbjct: 304 DLEFAYNPPRPFVPEGAADRRERCLEIFDIQCAGLAKRIEHTHAKTMVIGISGGLDSTLA 363 Query: 309 AAIAVDA---LGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLPIHDLVN 360 +A + LG+ ++ +P T+ ++ +A K LG + D+ P + Sbjct: 364 LLVAAECCKLLGRPASDIAAFTMPGFGTTGRTYNNAVKLCKLLGVTLREVDIRPA--CLR 421 Query: 361 HFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 HF + + +P+ + EN+Q+R R ILM ++N S M++ T + SEI++G+ T Sbjct: 422 HF-----EDIGHDPAVLDTAYENVQARERTQILMDVANKSGGMVVGTGDLSEIALGWSTY 476 Query: 419 YGD 421 GD Sbjct: 477 NGD 479 >gi|146343329|ref|YP_001208377.1| NAD synthetase [Bradyrhizobium sp. ORS278] gi|146196135|emb|CAL80162.1| Glutamine-dependent NAD(+) synthetase (EC 6.3.5. 1) (NAD(+) synthase [glutamine-hydrolyzing]) [Bradyrhizobium sp. ORS278] Length = 678 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 131/533 (24%), Positives = 213/533 (39%), Gaps = 80/533 (15%) Query: 34 NRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ 93 + QG + +F EL +SGY +DLV + + A + TL +HD ++VG P + Sbjct: 41 HEQGAAVAVFPELCLSGYAIDDLVKQDPLLDAVQRGLLTLVEASHDLMPVLIVGAPLRFS 100 Query: 94 EGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG----------------YSNDP 137 V N V++ G ++ V K LP Y EF+E R F SG + D Sbjct: 101 HRVYNCAVVIHRGEVLGVIPKSYLPTYREFYEGRHFASGAGIRGEMIEVAETMAPFGTDL 160 Query: 138 IV----FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTG 193 + + +G+ +CED+W L GA L +L+ SP + + R + Sbjct: 161 LFAAADVAGLVIGVEVCEDMWVPVTPASELALAGATVLVNLSGSPITVGRAESRSLLCRS 220 Query: 194 QISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSE--QNFMTEWHYDQ 249 + IY G+ +L +DG + F+ LA + + F + Q + D Sbjct: 221 TSARCLAAYIYAAAGVGESTTDLAWDGQTSIFENGVLLA-ESERFRQTGQTIFADVDLDL 279 Query: 250 QLSQWNYMS--DDSAST---------MYIPLQEEEAD----------------------- 275 + M DD+A + LQ E+D Sbjct: 280 LRQERALMGTFDDNARAQDQSVHWRRIGFELQPAESDIGFRRAIERFPFVPSDAARLDQD 339 Query: 276 ----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIML 326 YN V L ++ +++IG+SGG+DS + AA A+D LG + N+ + Sbjct: 340 CYEAYNIQVAGLTQRLRATGTKRIVIGVSGGLDSTHALIVAAKAMDLLGLPRTNILAYTM 399 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQS 384 P T QS A A K+L L I + EE + EN+Q+ Sbjct: 400 PGFGTGAQSKSYAHALMKSLEVSAAELDIRPAATQMLKDIGHPFGRGEEVYDVTFENVQA 459 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW 443 +R + L L+N ++L T + SE+++G+ T GD +N + KT + L W Sbjct: 460 GLRTDYLFRLANDRGGLVLGTGDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRW 519 Query: 444 -----RNSHGITSGL-GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILD 490 + S + L L+ I P ++ P E Q+ Q ++ PY + D Sbjct: 520 VIASRQFSAEVDRTLEAVLSAEISPELV---PVKEGETPQSTQAAIGPYELQD 569 >gi|291276811|ref|YP_003516583.1| putative NH(3)-dependent NAD(+) synthetase [Helicobacter mustelae 12198] gi|290964005|emb|CBG39844.1| putative NH(3)-dependent NAD(+) synthetase [Helicobacter mustelae 12198] Length = 263 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 114/221 (51%), Gaps = 16/221 (7%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 +L L++ +Q +FH V++GLSGGIDSA+ A + A + I +P +S Q LEDA Sbjct: 14 LLFLKNTLQAKSFHSVVLGLSGGIDSAVVAVLCKHAFPNTTL-AISMPTLSSSKQHLEDA 72 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + + V I F F +PS + N +RIR NIL S Sbjct: 73 RILCEHFEIPHIVHSIAPYEEIFTRNEKDFDTPKPSALRLGNFLARIRMNILYDYSMQKN 132 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 A+++ TSNKSE+ +GYGT+YGD++ NP+ +KT++F LA Sbjct: 133 ALVIGTSNKSELMLGYGTIYGDLAYAINPIGGFFKTEIFALAKALE-------------- 178 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN 499 +P SIL K PSA+L P Q+D + L Y +D +++ I N Sbjct: 179 LPDSILTKEPSADLYPDQSDAKELGYTYAQIDPLLEAIHTN 219 >gi|253567615|ref|ZP_04845026.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_6] gi|251841688|gb|EES69768.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_6] Length = 641 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 126/560 (22%), Positives = 228/560 (40%), Gaps = 87/560 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ + A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVERIESQIAIAEGKGVQIIVFPEMSITGYTCGDLFGQQILLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S R D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTEDTVRLCGQIVPIGANLLFETSDTTFGIEICEDLWATIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPII--YVNQVGGQDE----LIFDGASF 221 AE +F+++A N+ +H + IS I YV G E ++F G Sbjct: 186 AEIIFNMSAD----NEGIGKHHYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGL 241 Query: 222 CFDGQQQLAFQMKHFSEQNFM-----------------------------------TEWH 246 ++ LA + E+ + TE+ Sbjct: 242 IYENGSLLARSKRFCMEEQLIISEIDVERIRAERRINTTFAASQGNPGDKKAISVATEFI 301 Query: 247 YDQQLSQWNYMSDDSASTMYIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 ++L+ ++ D S ++P E E ++ + L + ++G+SG Sbjct: 302 NSKELT----LTRDFNSHPFVPQGAELDEHCEEVFSIQIAGLAQRLVHTKAKTAVVGISG 357 Query: 302 GIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L + V D LG ++++ + +P T+ ++ +A K+LG + I Sbjct: 358 GLDSTLALLVCVKTFDKLGLPRKDILGVTMPGFGTTDRTYNNAIDLMKSLGISIREISIQ 417 Query: 357 D-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 D + HF + + + EN Q+R R ILM ++N + M++ T + SE+++G+ Sbjct: 418 DACIQHFKDIDHDINVHD---VTYENSQARERTQILMDIANQTWGMVVGTGDLSELALGW 474 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPS 470 T GD + + KT V L W + + + L + I P ++ + Sbjct: 475 ATYNGDHMSMYGVNGSIPKTLVKYLVQWVAENDMDEDAKATLLDIVDTPISPELIPADEN 534 Query: 471 AELRPHQTDQESLPPYPILD 490 E++ Q ++ + PY + D Sbjct: 535 GEIK--QKTEDLVGPYELHD 552 >gi|186476920|ref|YP_001858390.1| NAD synthetase [Burkholderia phymatum STM815] gi|184193379|gb|ACC71344.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia phymatum STM815] Length = 685 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 140/573 (24%), Positives = 233/573 (40%), Gaps = 101/573 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N + R EA QG L+ F EL + Y +DL +++ + A Sbjct: 15 RVAVGVPRCRVADPAFNADETLRLAHEAAAQGAALVAFPELGLPAYTCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +A+ + + ++VG P Q + N +++ G ++ K LPNY EF+E Sbjct: 75 CKTALAKIVDASKKLPVALIVGMPLQVDHSLYNCAIVVARGAVLGAVPKTYLPNYGEFYE 134 Query: 126 KRTFISGYSNDPIVFRDI-----------------------RLGILICEDIWKNSNICKH 162 R + D V RDI R + ICED+W Sbjct: 135 ARQYAPA---DCAVARDIDLLGQRVPFGASLLFELTDVPDFRFHVEICEDVWVPIPPSSF 191 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA L +L+AS K RH++V Q + +Y + G+ ++ +DG + Sbjct: 192 ASLAGATVLVNLSASNVVVGKSGYRHQLVGQQSARCLAAYLYTSAGRGESSTDMAWDGQA 251 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNY-MS-----DDSASTM--- 265 ++ + LA + + F + + M D +++ Q + MS D++A Sbjct: 252 LIYENGEMLA-ESERFLDDSHMIFADIDLERLSHERMRQTTFGMSVQRHKDEAAKFQVVR 310 Query: 266 ---------------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIG 298 Y+P D YN V +L + +N KV+IG Sbjct: 311 VAIGLDASQALPLARKVERFPYVPADSRRRDERCNEVYNIQVQALVQRLSASNIQKVVIG 370 Query: 299 LSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KY 350 +SGG+DS L A A+D LG + ++ + +P TS ++L+ A +GC + Sbjct: 371 VSGGLDSTHALLVCAKAMDRLGLPRTHIVGVTMPGFATSDRTLKQARELMDVVGCTPMEI 430 Query: 351 DVLP-----IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 D+ P + DL H +S E I EN+Q+ R N L L+N +++ T Sbjct: 431 DIRPSCEQMLKDL-GHPYS-----AGEAKYDITFENVQAGERTNHLFRLANFHNGIVIGT 484 Query: 406 SNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-------LT 457 + SE+++G+ T GD ++ + KT + L W G G T Sbjct: 485 GDLSELALGWCTYGVGDHMSHYSVNASVPKTLITHLVRWVAETGAVGRSGSDTLLNVLAT 544 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILD 490 E+ P + KS A Q + + PY + D Sbjct: 545 EISPELVPGKSAGAI---EQKTESFIGPYELQD 574 >gi|29345615|ref|NP_809118.1| NAD synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|29337507|gb|AAO75312.1| glutamine-dependent NAD+ synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 641 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 126/560 (22%), Positives = 228/560 (40%), Gaps = 87/560 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ + A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVERIESQIAIAEGKGVQIIVFPEMSITGYTCGDLFGQQILLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S R D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTEDTVRLCGQIVPIGANLLFETSDTTFGIEICEDLWATIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPII--YVNQVGGQDE----LIFDGASF 221 AE +F+++A N+ +H + IS I YV G E ++F G Sbjct: 186 AEIIFNMSAD----NEGIGKHHYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGL 241 Query: 222 CFDGQQQLAFQMKHFSEQNFM-----------------------------------TEWH 246 ++ LA + E+ + TE+ Sbjct: 242 IYENGSLLARSKRFCMEEQLIISEIDVERIRAERRINTTFAASQGNPGDKKAISVATEFV 301 Query: 247 YDQQLSQWNYMSDDSASTMYIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 ++L+ ++ D S ++P E E ++ + L + ++G+SG Sbjct: 302 NSKELT----LTRDFNSHPFVPQGAELDEHCEEVFSIQIAGLAQRLVHTKAKTAVVGISG 357 Query: 302 GIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L + V D LG ++++ + +P T+ ++ +A K+LG + I Sbjct: 358 GLDSTLALLVCVKTFDKLGLPRKDILGVTMPGFGTTDRTYNNAIDLMKSLGISIREISIQ 417 Query: 357 D-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 D + HF + + + EN Q+R R ILM ++N + M++ T + SE+++G+ Sbjct: 418 DACIQHFKDIDHDINVHD---VTYENSQARERTQILMDIANQTWGMVVGTGDLSELALGW 474 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPS 470 T GD + + KT V L W + + + L + I P ++ + Sbjct: 475 ATYNGDHMSMYGVNGSIPKTLVKYLVQWVAENDMDEDAKATLLDIVDTPISPELIPADEN 534 Query: 471 AELRPHQTDQESLPPYPILD 490 E++ Q ++ + PY + D Sbjct: 535 GEIK--QKTEDLVGPYELHD 552 >gi|20094854|ref|NP_614701.1| NAD synthase [Methanopyrus kandleri AV19] gi|25090760|sp|Q8TVH1|NADE_METKA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|19888078|gb|AAM02631.1| NAD synthase [Methanopyrus kandleri AV19] Length = 284 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 26/261 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR ++ ++GLSGG+DS+ +AV+ALG+ENV ++LP + T + +EDA Sbjct: 26 LRGKFEEAGREIAVVGLSGGVDSSTTLGLAVEALGRENVVALILPERDTPEEDVEDAVEA 85 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAM 401 A+ G +Y V I +++ F + ++ P S N++ R+R +L +N + Sbjct: 86 AERFGVEYHVHDITEVLRAFGT--GSYVPCHPFSRKSDANLKPRVRMCVLYYFANELDGL 143 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +L T N++E GY TL+GD + P++ LYKTQV+ +A LG +P Sbjct: 144 VLGTGNRTEWLTGYFTLHGDGACDVAPIRHLYKTQVYVIAEH---------LG-----VP 189 Query: 462 PSIL-EKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE-------ESFINNDQEYND 512 I+ EK PSA L P QTD+ L YP LD ++ +V+ + E + Sbjct: 190 ERIVEEKEPSARLWPGQTDEGELGIDYPTLDALLYALVDEGLGPRKAVDWLGERGVEATE 249 Query: 513 ETVRYVEHLLYGSEYKRRQAP 533 E V L+ S +KRR AP Sbjct: 250 EDAEKVLDLVRSSSFKRRPAP 270 >gi|45358912|ref|NP_988469.1| NAD+ synthase-like protein [Methanococcus maripaludis S2] gi|45047778|emb|CAF30905.1| NAD+ synthase related protein [Methanococcus maripaludis S2] Length = 258 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/234 (34%), Positives = 128/234 (54%), Gaps = 19/234 (8%) Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 Q EE N C +R+ V+ + V++GLSGGIDSAL A ++V ALGK V +++P K Sbjct: 7 QLEELANNICDF-IREQVENADAKGVVVGLSGGIDSALVAYLSVMALGKNRVFGVIMPEK 65 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRG 388 ++P + A++LG +YDV I ++ F + +++ +E V N++ RIR Sbjct: 66 NSNPDDEKYGKLVAESLGIEYDVFDITPVLVAFGA--GGYVEGKEFDKRVDSNLKPRIRM 123 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +N ++ TSNKSEI +GYGT YGD+ F + +L+KT+V QLA + Sbjct: 124 TEVYYHANKKNYLVAGTSNKSEIYMGYGTKYGDLGSDFLTIGNLFKTEVRQLAGYVG--- 180 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 +P I++K+PSA L QTD++ L Y LD ++ + + +E Sbjct: 181 -----------VPKEIIDKAPSAGLWEGQTDEDELGISYETLDKLLNLMEKGKE 223 >gi|239626146|ref|ZP_04669177.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520376|gb|EEQ60242.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 659 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 119/542 (21%), Positives = 219/542 (40%), Gaps = 96/542 (17%) Query: 36 QGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG 95 +G+ L++F EL ++ Y DL F+ S + + + + D +G P + Sbjct: 37 RGVKLMVFPELCLTAYTCSDLFFQTSLLAKAREQLSRIIKASRDKDILAFIGMPWERDGK 96 Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVF--------------- 140 + N+ + G ++ + K NLPNYSEF+E R F G N+ VF Sbjct: 97 LYNAAAAIHRGKLLGIIPKKNLPNYSEFYEARHFCPG--NERPVFVSWEGGQVPMGMNLL 154 Query: 141 ------RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQ 194 R++ + ICED+W GA + + +AS K RHE++ Q Sbjct: 155 FRCSNLRNLTIAAEICEDVWVPCPPSIRHSLAGATVIVNCSASDETTGKDMYRHELICSQ 214 Query: 195 ISHVHLPIIYVNQVGGQD--ELIFDG-------------------ASFCFD-GQQQLAFQ 232 + + +Y N G+ +L+F G S C D ++L + Sbjct: 215 SARLVCGYVYANAGEGESTQDLVFGGQNIIAENGTCLVESRRFTNESICADLDMERLDSE 274 Query: 233 MKHFS----------EQNFM---------TEWHYDQQLSQWNYMSDDSASTM-------Y 266 + S E +M + + + Q +Q + + + + + + Sbjct: 275 RRRMSTFPAPEEARREGGYMIVDFELSLDSAVNTNAQTAQADGLKESARDVLRFIDPAPF 334 Query: 267 IPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA---- 315 +P E + C + L+ ++ ++GLSGG+DS L + V A Sbjct: 335 VPGDERQRSRR-CEEILSIQAMGLKKRLEHTGSQHAVVGLSGGLDSTLALLVTVRAFDAL 393 Query: 316 -LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 L + N+ I +P T+ ++ +A A A +G + + I V+ F+ + Q + Sbjct: 394 KLPRTNIHCITMPCFGTTDRTYNNACAMAAKVGAELREINIRQAVSQHFTDIGQDMDNH- 452 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 + EN Q+R R +LM ++N +++ T + SE+++G+ T GD + + K Sbjct: 453 -DVAYENSQARERTQVLMDIANQVGGLVIGTGDMSELALGWATYNGDHMSMYGVNASVPK 511 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLPPYPI 488 T V L + + T L +V+ +L+ S EL P Q ++ + PY + Sbjct: 512 TLVRHLVRY---YADTCREKELADVL-LDVLDTPVSPELLPPEDGKISQKTEDLVGPYEL 567 Query: 489 LD 490 D Sbjct: 568 HD 569 >gi|257052428|ref|YP_003130261.1| NAD synthetase [Halorhabdus utahensis DSM 12940] gi|256691191|gb|ACV11528.1| NAD+ synthetase [Halorhabdus utahensis DSM 12940] Length = 275 Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 20/259 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 + D + + ++GLSGG+DS+L A +AV+A+G EN+ +++P ++ DA Sbjct: 34 IADQLDAAGVDRAVLGLSGGVDSSLVAHLAVEAIGAENLHGLVMPSSVNDEATMSDAERV 93 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A LG +YDV+ I+ +V+ F + + + E + N++ R R + ++N A++ Sbjct: 94 AMELGIEYDVIEINPIVDTF---LDAYPEAEGEKMAVGNVRVRARAVLNYLVANTENALV 150 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T N++E GY T YGD + +P+ +LYK QV QLA +P Sbjct: 151 LGTGNRTESLTGYFTKYGDGAVDCHPIANLYKQQVRQLARHVG--------------VPQ 196 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE--ESFINNDQEYNDETVRYVE 519 I E++P+A + QTD+ L Y LD I+ +E E S + E V V Sbjct: 197 EIAERTPTAGMWVDQTDEGELGVEYDTLDSILALAIEGEVGTSATARIVGVDREIVERVR 256 Query: 520 HLLYGSEYKRRQAPVGTKI 538 L S +KR P K+ Sbjct: 257 DLFEQSGHKRSMPPAPAKL 275 >gi|298384535|ref|ZP_06994095.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_14] gi|298262814|gb|EFI05678.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_14] Length = 641 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 126/560 (22%), Positives = 227/560 (40%), Gaps = 87/560 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+ + A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNVERIESQIAIAEGKGVQIIVFPEMSITGYTCGDLFGQQILLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S R D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTEDTVRLCGQIVPIGANLLFETSDTTFGIEICEDLWATIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPII--YVNQVGGQDE----LIFDGASF 221 AE +F+++A N+ +H + IS I YV G E ++F G Sbjct: 186 AEIIFNMSAD----NEGIGKHHYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGL 241 Query: 222 CFDGQQQLAFQMKHFSEQNFM-----------------------------------TEWH 246 ++ LA + E+ + TE+ Sbjct: 242 IYENGSLLARSKRFCMEEQLIISEIDVERIRAERRINTTFAASQGNPGDKKAISVATEFI 301 Query: 247 YDQQLSQWNYMSDDSASTMYIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 ++L+ ++ D S ++P E E ++ + L + ++G+SG Sbjct: 302 NSKELT----LTRDFNSHPFVPQGAELDEHCEEVFSIQIAGLAQRLVHTKAKTAVVGISG 357 Query: 302 GIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L + V D LG ++++ + +P T+ ++ +A K+LG + I Sbjct: 358 GLDSTLALLVCVKTFDKLGLPRKDILGVTMPGFGTTDRTYNNAIDLMKSLGISIREISIQ 417 Query: 357 D-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 D + HF + + + EN Q+R R ILM ++N + M++ T + SE+++G+ Sbjct: 418 DACIQHFKDIDHDINVHD---VTYENSQARERTQILMDIANQTWGMVVGTGDLSELALGW 474 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPS 470 T GD + + KT V L W + + + L + I P ++ + Sbjct: 475 ATYNGDHMSMYGVNGSIPKTLVKYLVQWVAENDMDEDAKATLLDIVDTPISPELIPADEN 534 Query: 471 AELRPHQTDQESLPPYPILD 490 E++ Q ++ + PY + D Sbjct: 535 GEIK--QKTEDLVGPYELHD 552 >gi|315231443|ref|YP_004071879.1| NAD synthetase [Thermococcus barophilus MP] gi|315184471|gb|ADT84656.1| NAD synthetase [Thermococcus barophilus MP] Length = 254 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/238 (34%), Positives = 129/238 (54%), Gaps = 24/238 (10%) Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSA A +AV ALGK+ V +++PY Q ++DA + LG Y ++ I +V+ F Sbjct: 38 DSATTAFLAVKALGKDKVLGLIMPY--YENQDVKDAKLVCETLGINYKIINIKPIVDAF- 94 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + L EP I N+ R R +L A +N ++L TSNKSE+ GY T +GD + Sbjct: 95 ---EKSLDFEPDKITKGNVMVRTRMTLLYAHANQYNLLVLGTSNKSELLTGYYTKWGDGA 151 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + PL +LYKT+V+++A LG +P I++K P+A L QTD+ L Sbjct: 152 SDYAPLINLYKTEVWEIA---------KRLG-----VPERIIKKKPTAGLWIGQTDEGEL 197 Query: 484 P-PYPILDDIIKRIVENEESFINNDQEYN--DETVRYVEHLLYGSEYKRRQAPVGTKI 538 Y +LD+I+ R+V+ + +E N + + YVE+L+ SE+KR+ P G +I Sbjct: 198 GISYKLLDEILYRLVDLKMPKEKIAEELNIPIKKIEYVENLIKKSEHKRK-LPAGPEI 254 >gi|309789946|ref|ZP_07684522.1| NAD synthetase [Oscillochloris trichoides DG6] gi|308227966|gb|EFO81618.1| NAD synthetase [Oscillochloris trichoides DG6] Length = 683 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 133/527 (25%), Positives = 214/527 (40%), Gaps = 82/527 (15%) Query: 43 FTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVI 102 F EL +S Y EDL + + + A +A+ + + + D ++VG P + + + N V Sbjct: 50 FPELGLSAYSNEDLFHQDALLDASLAALQRVVAVSTDLNPLLLVGVPLRHEGRLFNCAVA 109 Query: 103 LDAGNIIAVRDKINLPNYSEFHEKRTFISG----------------YSNDPIVFRD---- 142 + G I+ V K LPNY EF+EKR F + + ND I + Sbjct: 110 IYRGQIVGVTPKSYLPNYREFYEKRQFAAARDALSHEIRVLGQTVPFGNDLIYVAEDLPG 169 Query: 143 IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPI 202 +R+ ICED+W GA L +L+AS K R E+ Q Sbjct: 170 LRIHSEICEDVWTPVPPSTLAALAGATVLCNLSASNITIGKADYRRELCAAQSGRCVAAY 229 Query: 203 IYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHF-SEQNFMTEWHYDQQLSQWNYMSD 259 +Y G+ +L +DG + ++ + LA + SEQ + + D+ L + Sbjct: 230 LYSAAGPGESTTDLAWDGHALIYENHECLAESQRFCDSEQVILADIDLDRLLQDRMRLGS 289 Query: 260 --DSASTM-------------------------------YIPLQEEEAD------YNACV 280 DS + Y+P D YN V Sbjct: 290 FGDSVADQRERLRQMRQIPFAFQVPQGEIRLLRHVERFPYVPDNPATRDERCYEAYNIQV 349 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQS 335 L ++ K++IG+SGG+DS + AA +D LG + N+ +P TS ++ Sbjct: 350 HGLLQRLRSTKIEKLVIGVSGGLDSTQALIVAARTLDRLGLPRRNILAYTMPGFATSDRT 409 Query: 336 LEDAAACAKALGCKYDVLPIH-DLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMA 393 L +A A ALG + + I + L F++ P I EN+Q+ R + L Sbjct: 410 LRNAHALMAALGVHAEEIDIRPSALQMLRDLGHPFVEGAPQYDITFENVQAGERTSHLFR 469 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 L+N+ A++L T + SE+++G+ T GD +N + KT + L W HG Sbjct: 470 LANYHNALVLGTGDLSELALGWATYGVGDHMSHYNVNASVPKTLIQHLIRWVVRHG---E 526 Query: 453 LGPLTEVIPPSILEKSPSAEL---------RPHQTDQESLPPYPILD 490 G + SIL+ S EL P Q+ + + PY + D Sbjct: 527 FGAEANRVLQSILDTEISPELVPATAGSQDEPAQSTEAKIGPYALQD 573 >gi|163853433|ref|YP_001641476.1| NAD synthetase [Methylobacterium extorquens PA1] gi|163665038|gb|ABY32405.1| NAD+ synthetase [Methylobacterium extorquens PA1] Length = 690 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 133/551 (24%), Positives = 222/551 (40%), Gaps = 83/551 (15%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 GD A N+A +A+ G L +F EL +S Y EDL+ + + + A + + L + Sbjct: 35 GDPAANVADISGLARQAHEAGAALAVFPELCVSSYAIEDLLLQATLLDAVETGVARLVEE 94 Query: 77 THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG---- 132 + + +VVG P + + + N V + G ++ V K LPNY EF+EKR F SG Sbjct: 95 SAELTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYEKRHFASGAGIT 154 Query: 133 ------------YSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + D I D RL I +CED+W GA + + + Sbjct: 155 AETIRLGGLEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMDAVLAGATVIANPSG 214 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQQQLAFQ 232 SP + R ++T S L YV G E L +DG + + +LA + Sbjct: 215 SPITVGRADSR-ALLTRAASMRGL-CAYVYAAAGTGESTTDLSWDGQTSIDENGVRLA-E 271 Query: 233 MKHFSEQNFMTEWHYD-----QQLSQWNYMSDDSA-------STMYIPLQEEEAD----- 275 + F + +T D Q+ Q + D++ T+ L E+D Sbjct: 272 GQRFPQAPVVTLADIDLDLIAQERLQAGSLDDNAPRHGTPPWRTIPFRLDPPESDLGLER 331 Query: 276 ----------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAA 310 YN V L + + +IG+SGG+DS + A Sbjct: 332 RVERFPFVPADPARLAQDCYEAYNIQVAGLAQRLAATGTKRAVIGVSGGLDSTHALIVVA 391 Query: 311 IAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A D LG ++++ LP TS ++ +A A +ALG + + I + M Sbjct: 392 KAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAARQMLTDMGH 451 Query: 369 FL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGG 425 E + EN+Q+ +R + L L+N +++ T + SE+++G+ T GD Sbjct: 452 PFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWSTYGVGDQMSH 511 Query: 426 FNPLKDLYKTQVFQLASWRNSHG------ITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 + + KT + L W + G I + L I P ++ P++E Q+ Sbjct: 512 YGVNAGVPKTLIQHLIRWVIASGQFGEAEIRTLRAVLDTEISPELV---PASEGEGPQST 568 Query: 480 QESLPPYPILD 490 + + PY + D Sbjct: 569 EAKIGPYALQD 579 >gi|325298106|ref|YP_004258023.1| NAD+ synthetase [Bacteroides salanitronis DSM 18170] gi|324317659|gb|ADY35550.1| NAD+ synthetase [Bacteroides salanitronis DSM 18170] Length = 643 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 122/553 (22%), Positives = 235/553 (42%), Gaps = 71/553 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N +A A G+ +I+F EL ++GY DL + ++ Sbjct: 6 VKVAAAVPLVKVADCQYNAEQAESLIARAEGSGVQVIVFPELNLTGYSCGDLFGQALLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T ++G P + + ++N V++ G I+ + K LPNY EF+ Sbjct: 66 QAEMALMRVLNNTRQLDIISIMGMPVRVESVLMNCAVVIQKGKILGIVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS-NDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQ 166 E R F S ++ D V R ++R GI +CED+W L + Sbjct: 126 EHRWFASAFTYPDEKVVRLCGQLAPVGANLLFESSEMRFGIELCEDVWAPVPPSSALALK 185 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GAE +F+L+A +K + ++ Q + ++ + G+ +++F G + ++ Sbjct: 186 GAEIIFNLSADTENISKHQYLRSLLAQQSARCLSGYVFASSGFGESTTDVVFAGNALIYE 245 Query: 225 GQQQLAFQMK-HFSEQNFMTEWHYDQQLSQ-------WNYMSDDSASTM----------- 265 LA + F +Q ++E ++ S+ + + A T+ Sbjct: 246 NGTLLAASERFSFDKQLVISEIDVERLRSERLVNTTFASSVRQAGAGTLKVIQTERVPEK 305 Query: 266 ------------YIP----LQEEEAD--YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P L +E + ++ V L + V++G+SGG+DS L Sbjct: 306 ELSLTRKIEPHPFVPAGGKLLDERCEEIFSIQVAGLAKRLVHTGCKTVVVGISGGLDSTL 365 Query: 308 CAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V D LG ++ + I +P T+ ++ +A ++LG + I + Sbjct: 366 ALLVCVKTFDKLGLSRKGIVGITMPGFGTTGRTHRNAVELMRSLGVTSREISIREACLQH 425 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + Q + + EN Q+R R ILM +N +++ T + SE+++G+ T GD Sbjct: 426 FEDIGQ--DADVHDVTYENSQARERTQILMDYANKIGGLVIGTGDLSELALGWATYNGDH 483 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRPHQ 477 + + KT V L +W G+ T+ L + I P ++ + ++ Q Sbjct: 484 MSMYGVNASIPKTLVRYLVNWVAETGVDADSQTTLLDIIDTPISPELIPADENGNIK--Q 541 Query: 478 TDQESLPPYPILD 490 ++ + PY + D Sbjct: 542 KTEDLVGPYELHD 554 >gi|218129931|ref|ZP_03458735.1| hypothetical protein BACEGG_01514 [Bacteroides eggerthii DSM 20697] gi|317476849|ref|ZP_07936092.1| NAD+ synthetase [Bacteroides eggerthii 1_2_48FAA] gi|217988041|gb|EEC54366.1| hypothetical protein BACEGG_01514 [Bacteroides eggerthii DSM 20697] gi|316907024|gb|EFV28735.1| NAD+ synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 641 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 118/500 (23%), Positives = 208/500 (41%), Gaps = 64/500 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + A+ +G+ +I+F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRIKVADCKFNAGQIEKEIIIADGKGVQIIVFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G I+ V K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQMDIISILGMPVPLNGMLLNTAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S R D GI ICED+W L QG Sbjct: 126 EKRWFASACEVSETTARLCGQVVPMGRNLLFETADTTFGIEICEDLWAPIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNLSADNEGIGKHAYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMSDDSA-------------STMYI---- 267 LA + F Q ++E + ++ + +A ST Y+ Sbjct: 246 GTLLAGSERFSFEGQLVVSEIDVEHIRTERRVNTTFAACHANCAPEIPVRISTEYVNSGD 305 Query: 268 ----------------PLQEEEAD--YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 P+ +E + ++ V L + N ++G+SGG+DS L Sbjct: 306 LNLTRTFEPHPFVPQGPVLDERCEEVFSIQVSGLAQRLVHTNAKSAVVGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + V D LG ++ + + +P T+ ++ +A +LG + I D + HF Sbjct: 366 LVCVKTFDKLGWDRKGIIGVTMPGFGTTDRTHTNAVDLMTSLGVTMREVCIKDACIQHFK 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDINVHD---VVYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 483 SMYGVNSSIPKTLVKHLVKW 502 >gi|322368311|ref|ZP_08042880.1| NAD synthetase [Haladaptatus paucihalophilus DX253] gi|320552327|gb|EFW93972.1| NAD synthetase [Haladaptatus paucihalophilus DX253] Length = 264 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%) Query: 267 IPLQEEEADY--NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 + L +EE D + V +R+ V ++GLSGGIDS L A +A +ALG EN+ + Sbjct: 4 LELSDEELDARRDHIVSFIRETVADAGTETAVLGLSGGIDSTLTAYLAAEALGTENLHGL 63 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 ++P + ++ DA A LG YDV I+ +V+ F + + + E + N ++ Sbjct: 64 VMPGAVSREDNMSDAEWVASELGITYDVFEINPIVDSF---LDAYSEAEGDHMAVGNARA 120 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R R + ++NH +++L T N++E VGY T YGD + +P+ +LYK QV QLA Sbjct: 121 RTRAVMNYLVANHEGSVVLGTGNRTEALVGYFTKYGDGAVDCHPIGNLYKQQVRQLAKHV 180 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESF 503 + P + EK +A L QTD+E L Y LD I+ V+ S Sbjct: 181 GA--------------PDELAEKEATAGLWAGQTDEEELGIDYDTLDAILALHVDGPLSV 226 Query: 504 INNDQEYNDET---VRYVEHLLYGSEYKRRQAPV 534 ++ T VR + + SE+KR P Sbjct: 227 SATARQVEGATADDVRRIGEMYDRSEHKRGVPPA 260 >gi|237750879|ref|ZP_04581359.1| NH(3)-dependent NAD synthetase [Helicobacter bilis ATCC 43879] gi|229373324|gb|EEO23715.1| NH(3)-dependent NAD synthetase [Helicobacter bilis ATCC 43879] Length = 253 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 112/201 (55%), Gaps = 20/201 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L++ V F +V+IGLSGGIDSA+ + AL N + +++P +S +S+ED+ Sbjct: 16 LQNEVSNRGFKQVVIGLSGGIDSAVVTLLCHKALCG-NTKALLMPSTSSSKESIEDSILL 74 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 ++ Y +LPI D + F +L ++ + + N SR+R L ++ + ++ Sbjct: 75 CESFKIDYAILPIKDFDSIFCNLY-----KDHTRLSRGNFCSRMRMATLYHIAQMEQRLV 129 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNK+EI +GYGT++GD++ NP+ +LYKTQ++ LA IP Sbjct: 130 IGTSNKTEIMLGYGTIFGDLACAINPIGNLYKTQIYMLAELLE--------------IPR 175 Query: 463 SILEKSPSAELRPHQTDQESL 483 I++K+PSA+L QTD+ L Sbjct: 176 QIIDKAPSADLYAGQTDENEL 196 >gi|154149217|ref|YP_001406584.1| NAD+ synthetase [Campylobacter hominis ATCC BAA-381] gi|189030328|sp|A7I243|NADE_CAMHC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|153805226|gb|ABS52233.1| NAD+ synthetase [Campylobacter hominis ATCC BAA-381] Length = 247 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 134/253 (52%), Gaps = 25/253 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+ + K I+G+SGG+DSA+ +A+ A K N ++LP K + ++L DA + Sbjct: 14 LKKSLSKTYTENFIVGISGGLDSAVVSALCAKAKPK-NTFGLILPAKSSDKKNLNDAISH 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + G KY+++ I + F +E S I N +R+R ++L S ++ Sbjct: 73 CEKWGIKYEIISIEPFLQAF----RDSRNDEISRIRLGNFAARVRMSLLYDFSAKISGVV 128 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSN SE +GYGT+YGD++ FNP+ +L+KT++F+ A + N I Sbjct: 129 VGTSNLSERMLGYGTIYGDLACAFNPIGELFKTEIFEFAKFLN--------------IDE 174 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 I+ K+PSA+L Q+D+ L Y LD+I++ I+ + +++ ET+ ++++ Sbjct: 175 KIISKAPSADLWEGQSDEGDLGYDYASLDEILRAILRKKSL-----AKFDQETINFIQNR 229 Query: 522 LYGSEYKRRQAPV 534 + +++K + + Sbjct: 230 IKNNKFKLKMPKI 242 >gi|150402519|ref|YP_001329813.1| NAD+ synthetase [Methanococcus maripaludis C7] gi|150033549|gb|ABR65662.1| NAD+ synthetase [Methanococcus maripaludis C7] Length = 258 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/234 (33%), Positives = 127/234 (54%), Gaps = 19/234 (8%) Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 Q +E N C +R+ V+ + V++GLSGGIDSAL A ++V ALGKENV +++P K Sbjct: 7 QLDELANNICDF-IREQVENADAKGVVVGLSGGIDSALVAYLSVKALGKENVFGVIMPEK 65 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRG 388 ++P + A++LG Y + I ++ F + +++ +E V N++ RIR Sbjct: 66 NSNPDDEKYGKLVAESLGIDYTIFDITPVLVAFGA--GGYVEGKEFDKRVDANLKPRIRM 123 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +N ++ TSNKSEI +GYGT YGD+ F + +L+KT+V QLA + Sbjct: 124 TEVYYHANKKNYLVAGTSNKSEIYMGYGTKYGDLGSDFLTIGNLFKTEVRQLAGYVG--- 180 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 +P I++K+PSA L QTD+ L Y LD ++ + + +E Sbjct: 181 -----------VPKEIIDKAPSAGLWDGQTDEGELGISYETLDKLLNLMEKGKE 223 >gi|329891230|ref|ZP_08269573.1| carbon-nitrogen hydrolase family protein [Brevundimonas diminuta ATCC 11568] gi|328846531|gb|EGF96095.1| carbon-nitrogen hydrolase family protein [Brevundimonas diminuta ATCC 11568] Length = 682 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 135/567 (23%), Positives = 225/567 (39%), Gaps = 95/567 (16%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A PVV D A N + R +A QG D+++F EL +S Y +DL + + ++ Sbjct: 18 VRVAAATPVVHVADPAANAEEHERLIRQAGAQGADMLVFPELSLSAYAIDDLHMQAALLE 77 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L + G V+G P ++ + + N V+L G ++ V K LPNY E++ Sbjct: 78 EVERRIARLAEVADEAGVIAVIGAPIRNGDALFNCAVVLGGGEVLGVVPKSYLPNYREYY 137 Query: 125 EKRTF--ISGYSNDPIVFR----DIRLGIL--------------ICEDIWKNSNICKHLK 164 EKR F + S D +V D G++ ICED W Sbjct: 138 EKRWFAPAASRSEDAVVLNGASVDFAPGLIFEATNRPGFVFAVEICEDFWAPQPPSTRAA 197 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K +R + Q + ++ G+ +L +DG + Sbjct: 198 LAGARILCNLSASNIVIGKADERALLCASQSARTLSAYVFAASGWGESTTDLAWDGQATI 257 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD---------------------------------- 248 + +LA + + F+ + +T D Sbjct: 258 HELGARLA-EGERFALHSHLTIADVDVDRIGLDRLRNGTFADCARIEGEAATVVPFEAGE 316 Query: 249 -------QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + L ++ ++ DD+A Q+ +N V L + ++IG+SG Sbjct: 317 GPTGALIRPLDRFPFVPDDAARLD----QDCFEAFNIQVQGLMRRMTATGSKTLVIGVSG 372 Query: 302 GIDSA---LCAAIAVDAL--GKENVQTIMLPYKYTSPQSLEDAAACAKAL---GCKYDVL 353 G+DS L A A D L + + +P TS + +A A KAL G + D+ Sbjct: 373 GLDSTQALLVACRAFDRLEQPRTGILAFTMPGFATSDGTKSNAWALMKALGVTGAEIDIR 432 Query: 354 PIHDLVNHFFSLMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 P + + F +P I EN+Q+ +R + L L+N + +L T + SE++ Sbjct: 433 PAAE--QMLRDIGHAFADGQPVHDITFENVQAGLRTDYLFRLANQNHGFVLGTGDLSELA 490 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP--SILEKSP 469 +G+ T GD +N + KT + L W G+ +P +IL Sbjct: 491 LGWCTYGVGDHMSHYNVNGGVAKTLIQHLIRWVAERGLVG-----EAAVPTLHAILATEI 545 Query: 470 SAELRPH------QTDQESLPPYPILD 490 S EL P Q+ Q + PY + D Sbjct: 546 SPELVPAGADGAIQSTQSIVGPYALND 572 >gi|111222668|ref|YP_713462.1| NAD synthetase [Frankia alni ACN14a] gi|111150200|emb|CAJ61895.1| NAD(+) synthase (glutamine-hydrolyzing) [Frankia alni ACN14a] Length = 713 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 134/548 (24%), Positives = 225/548 (41%), Gaps = 88/548 (16%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGG 81 +A ARRA + G+D++++ EL +S Y +DL + + + A A+DT+ + + G Sbjct: 65 TVALARRA----DADGVDVVVYPELGLSSYALDDLHLQDALLDAVEQAVDTVCRASAELG 120 Query: 82 AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--------- 132 ++VG P + + + N+ + + G I+ V K LPNY E++EKR F SG Sbjct: 121 PLLLVGAPLRHRGRLYNTALAISRGRILGVVPKTFLPNYREYYEKRWFASGAGVTGEEIT 180 Query: 133 -------YSNDPIV----FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 + D I D+ +GI ICED W + GA L +L+AS Sbjct: 181 VAGRTVPFGTDLIFEATDLADLVVGIEICEDYWAPIPPSSYAAMAGATLLANLSASNIVV 240 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R + Q + +Y G+ +L +DG + LA + + F++ Sbjct: 241 GKAADRAHLSAAQSARALAAYVYSAAGTGESTTDLAWDGQGTIHELGDLLA-ESERFADT 299 Query: 240 NFMTEWHYDQQLSQWNYMSD----DSASTM------------------------------ 265 + D + M DSA+ Sbjct: 300 PQLLVADVDLARVRQERMRTGTFHDSAAVAGRPEQRFRTVRFDHRPHRRDVGLRRHQRRF 359 Query: 266 -YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDA 315 ++P E D +N V L + +++IG+SGG+DS + AA A D Sbjct: 360 PFVPDTAERLDLDCYEAFNIQVHGLARRYRATGGGRMVIGVSGGLDSTHALIVAAKACDR 419 Query: 316 LG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 LG + + LP TS ++ +A A +ALG + + I + + E Sbjct: 420 LGVPRTTILGYTLPGFATSAETKANAWALMRALGVEAAEIDIRPAARQLLADLGHPAAEG 479 Query: 374 PS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLK 430 + + EN+Q+ +R + L L+NH ++ T + SE+++G+ T GD + Sbjct: 480 AADYDVTYENVQAGLRTDYLFRLANHHGGFVVGTGDLSELALGWCTYGVGDQMSHYAVNA 539 Query: 431 DLYKTQVFQLASWRNSHG-ITSGLGPL------TEVIPPSILEKSPS-AELRPHQTDQES 482 + KT + L W SH + G L TE+ P E P+ AE Q+ Q+ Sbjct: 540 GVPKTLIQYLIRWAVSHDQFDADTGKLLTAVLDTEISP----ELVPADAETGAMQSTQDR 595 Query: 483 LPPYPILD 490 + PY + D Sbjct: 596 IGPYELHD 603 >gi|312136978|ref|YP_004004315.1| nh(3)-dependent nad(+) synthetase [Methanothermus fervidus DSM 2088] gi|311224697|gb|ADP77553.1| NH(3)-dependent NAD(+) synthetase [Methanothermus fervidus DSM 2088] Length = 257 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/266 (31%), Positives = 143/266 (53%), Gaps = 31/266 (11%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 E +Y+ + + ++ V++ + V++GLSGGIDS++ A ++ ALG +NV +++P Sbjct: 3 EMEYSEVINKIENFISRKVEEAGANGVVLGLSGGIDSSVVAYLSKKALGSKNVFGLIMPS 62 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 + T + ++DA + AK LG Y+++ I ++ F S+ + + + I N+ R+R Sbjct: 63 ETTKEEDVKDAISIAKNLGINYEIINIEPILKKFRSM----CKHKGNKIAIANLGPRVRM 118 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 IL SN +++ T NKSE+ +GY T YGD P+ DLYKTQV ++A Sbjct: 119 TILYYHSNSLNSLVAGTGNKSELLIGYFTKYGDGGVDILPIGDLYKTQVRKIAYE----- 173 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINND 507 LG +P I+EK PSA L QTD++ + Y LD I+ +VE + + N Sbjct: 174 ----LG-----VPKKIIEKPPSAGLWRGQTDEDEIGLDYETLDKILFLMVEKK---LKNH 221 Query: 508 QEYND-----ETVRYVEHLLYGSEYK 528 + + +T+ VE ++ +E+K Sbjct: 222 EIHEKLGIPLKTIGRVEEMIKNAEHK 247 >gi|293190123|ref|ZP_06608661.1| putative NH(3)-dependent NAD(+) synthetase [Actinomyces odontolyticus F0309] gi|292821099|gb|EFF80051.1| putative NH(3)-dependent NAD(+) synthetase [Actinomyces odontolyticus F0309] Length = 693 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 128/579 (22%), Positives = 234/579 (40%), Gaps = 96/579 (16%) Query: 29 AREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF 88 A E + +G+ + +F EL +SGY +DL + + A+ + + D +VVG Sbjct: 36 AARELDARGVAMGVFPELCVSGYAIDDLFLQDVLLDNVEKALAQIVEASADLLPFLVVGA 95 Query: 89 PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFIS----------------- 131 P + + N V + G ++A+ K +LPNY EF+EKR F++ Sbjct: 96 PLRKDNALYNCAVAIHRGRVLAIVPKSHLPNYREFYEKRHFVTMPPRACERIEVPWGGVE 155 Query: 132 GYSNDPIVFR------------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 +S P+ + +GI ICED+W L GA L +L+ASP Sbjct: 156 EFSGGPVWVPFGQVLLSADDVPGLTIGIEICEDMWVPVTPATELALAGATVLANLSASPI 215 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFS 237 + R +V + +Y G+ +L +DG + ++ +LA + F Sbjct: 216 TVGRGADRELMVRSVSARCSAAYVYTAAGMGESSTDLAWDGEAMIYEAGDRLAIG-ERFQ 274 Query: 238 EQNFMTEWHYDQQL--------------SQWNYMSDDSASTMYI---------------- 267 E +T D + +Q + D+ + + Sbjct: 275 EGAHITIADVDLERLRTERKRQNSFTDNAQRYFAGDERMAPQEVEFTLDPPRTNLGLERP 334 Query: 268 ----------PLQEEEADYNACVLSLRDYVQKNNF---HKVIIGLSGGIDSA---LCAAI 311 P + E+ Y A + + VQ+ K+IIG+SGG+DS + AA Sbjct: 335 VNRFPFVPNDPTRLEQDCYEAYNIQVAGLVQRLRAIGNPKIIIGVSGGLDSTHALVVAAH 394 Query: 312 AVDALGKENVQTI--MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+D LG+ + LP TS ++ ++A + LG + + I + + Sbjct: 395 AMDLLGRPRTDILCYTLPGFATSERTKKNATLLCQYLGTSFQEIDIRPAATQMLADIGHP 454 Query: 370 LQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGF 426 E + + EN+Q+ +R + L L+NH + ++L T + SE+++G+ T GD + Sbjct: 455 YGEGEATYDVTFENVQAGLRTDYLFRLANHLRGIVLGTGDLSELALGWCTYGVGDQMSHY 514 Query: 427 NPLKDLYKTQVFQLASWR------NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 + KT + L W + H L L I P ++ P ++ Q+ Q Sbjct: 515 AVNTGVPKTLMQHLIRWVVASKQFDDHVGEVLLSILNTEISPELVPAKPGEKM---QSTQ 571 Query: 481 ESLPPYPILD----DIIKRIVENEESFINNDQEYNDETV 515 + + PY + D +++R + ++ ++D +V Sbjct: 572 DKIGPYNLQDFTLYHVLRRGARPSKIAFLAEKAWSDASV 610 >gi|257387221|ref|YP_003176994.1| NAD synthetase [Halomicrobium mukohataei DSM 12286] gi|257169528|gb|ACV47287.1| NAD+ synthetase [Halomicrobium mukohataei DSM 12286] Length = 277 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 124/247 (50%), Gaps = 21/247 (8%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA-KALGCK 349 IIGLSGGIDS L + +AV+ALG NV +++P + ++ DA A + L + Sbjct: 42 GVETAIIGLSGGIDSTLTSHLAVEALGAANVYGLVMPSEVNREANMSDAERVASELLDIE 101 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 YDV+ + + + F + + E + N++ R R + +NH +++L T N+S Sbjct: 102 YDVIEVEPIADAF---LDGYPDAEGDQLAVGNLRVRCRAVLNYLAANHRDSIVLGTGNRS 158 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E VGY T YGD + +P+ +LYK QV QLA+ +P + EK+ Sbjct: 159 EALVGYFTKYGDGAVDCHPIANLYKGQVRQLATHVG--------------VPDDLAEKTA 204 Query: 470 SAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE--YNDETVRYVEHLLYGSE 526 SAE+ QTD+ L YP LD I+ VE S E +++ V +V L GSE Sbjct: 205 SAEMWLDQTDEAELGIDYPTLDSILALHVEGGVSASATAAEIGVDEDAVEHVRTLYEGSE 264 Query: 527 YKRRQAP 533 +KR P Sbjct: 265 HKRAAPP 271 >gi|31793618|ref|NP_856111.1| NAD synthetase [Mycobacterium bovis AF2122/97] gi|57116990|ref|NP_216954.2| NAD synthetase [Mycobacterium tuberculosis H37Rv] gi|121638320|ref|YP_978544.1| NAD synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662273|ref|YP_001283796.1| NAD synthetase [Mycobacterium tuberculosis H37Ra] gi|161350066|ref|NP_336996.2| NAD synthetase [Mycobacterium tuberculosis CDC1551] gi|215404376|ref|ZP_03416557.1| NAD synthetase [Mycobacterium tuberculosis 02_1987] gi|215412194|ref|ZP_03420958.1| NAD synthetase [Mycobacterium tuberculosis 94_M4241A] gi|215427824|ref|ZP_03425743.1| NAD synthetase [Mycobacterium tuberculosis T92] gi|215431386|ref|ZP_03429305.1| NAD synthetase [Mycobacterium tuberculosis EAS054] gi|215446685|ref|ZP_03433437.1| NAD synthetase [Mycobacterium tuberculosis T85] gi|224990814|ref|YP_002645501.1| NAD synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|260187447|ref|ZP_05764921.1| NAD synthetase [Mycobacterium tuberculosis CPHL_A] gi|260205744|ref|ZP_05773235.1| NAD synthetase [Mycobacterium tuberculosis K85] gi|289448082|ref|ZP_06437826.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis CPHL_A] gi|289575133|ref|ZP_06455360.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis K85] gi|289758570|ref|ZP_06517948.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T85] gi|294994452|ref|ZP_06800143.1| NAD synthetase [Mycobacterium tuberculosis 210] gi|298525918|ref|ZP_07013327.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis 94_M4241A] gi|306776709|ref|ZP_07415046.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu001] gi|306785235|ref|ZP_07423557.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu003] gi|306789594|ref|ZP_07427916.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu004] gi|306793921|ref|ZP_07432223.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu005] gi|306798315|ref|ZP_07436617.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu006] gi|306804191|ref|ZP_07440859.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu008] gi|306808761|ref|ZP_07445429.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu007] gi|306968593|ref|ZP_07481254.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu009] gi|307080526|ref|ZP_07489696.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu011] gi|307085126|ref|ZP_07494239.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu012] gi|61228446|sp|P0A5L6|NADE_MYCTU RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|61228447|sp|P0A5L7|NADE_MYCBO RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|31619211|emb|CAD97325.1| GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE NADE (NAD(+) SYNTHASE [GLUTAMINE-HYDROLYSING]) [Mycobacterium bovis AF2122/97] gi|41353704|emb|CAB03781.2| GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE NADE (NAD(+) SYNTHASE [GLUTAMINE-HYDROLYSING]) [Mycobacterium tuberculosis H37Rv] gi|121493968|emb|CAL72445.1| Glutamine-dependent NAD(+) synthetase nadE [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148506425|gb|ABQ74234.1| NAD(+) synthetase [Mycobacterium tuberculosis H37Ra] gi|224773927|dbj|BAH26733.1| NAD synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|289421040|gb|EFD18241.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis CPHL_A] gi|289539564|gb|EFD44142.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis K85] gi|289714134|gb|EFD78146.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T85] gi|298495712|gb|EFI31006.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis 94_M4241A] gi|308214870|gb|EFO74269.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu001] gi|308330057|gb|EFP18908.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu003] gi|308333897|gb|EFP22748.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu004] gi|308337700|gb|EFP26551.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu005] gi|308341381|gb|EFP30232.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu006] gi|308344868|gb|EFP33719.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu007] gi|308349179|gb|EFP38030.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu008] gi|308353799|gb|EFP42650.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu009] gi|308361692|gb|EFP50543.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu011] gi|308365304|gb|EFP54155.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu012] Length = 679 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 125/562 (22%), Positives = 227/562 (40%), Gaps = 81/562 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIVF---RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G + D+ G + ICED++ Sbjct: 132 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 252 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 310 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 311 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 369 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 370 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 429 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G Sbjct: 430 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALG 489 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 490 WSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPEL 546 Query: 474 RPH-----QTDQESLPPYPILD 490 P Q+ + + P+ + D Sbjct: 547 IPTGEEELQSSEAKVGPFALQD 568 >gi|307565300|ref|ZP_07627793.1| NAD+ synthetase [Prevotella amnii CRIS 21A-A] gi|307345969|gb|EFN91313.1| NAD+ synthetase [Prevotella amnii CRIS 21A-A] Length = 655 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 119/490 (24%), Positives = 211/490 (43%), Gaps = 76/490 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V DI N+++ + +A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVASAIPAVKVADIQYNLSEIEKQVIKAEGEGVEIIVFPELSLTGYSCQDLFQQQVLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L T I+VG P +LN +++ G ++ + K LPNY EF+ Sbjct: 66 NIEIAVVQLLDFTRQLDITIIVGAPICVNSVLLNCALVIQHGKLLGIVPKTYLPNYGEFY 125 Query: 125 EKRTFISG----------------YSNDPIVF---RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S S D +F + +R GI ICED+W L Sbjct: 126 EKRWFASSQDLQLQSIYYVGDKMDISTDIQLFSTSQGVRFGIEICEDLWSPLPPSNQLTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K +V Q + +Y + G+ ++++ G + + Sbjct: 186 AGAELIFNLSASDDLIGKHNYLKTLVAQQSARTICGYVYSSCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHF--SEQNFMTEWHYD----QQLSQWNYMSDDSASTM------------ 265 + + LA + K F Q ++E D ++ + +++ + M Sbjct: 246 ENGKLLA-EAKRFEVEAQIIISEIDIDRLRIERRANTTFVNAQRPTMMQRLRANNQAILS 304 Query: 266 ------------------------YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVI 296 +IP EE E N V L + N V+ Sbjct: 305 NIPTCIPPSIQREFILTRSVYKYPFIPKGEELREHCEEILNIQVCGLAKRLLHINCKTVV 364 Query: 297 IGLSGGIDSALC---AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 IG+SGG+DS L A++A D LG ++ + + +P T+ ++ +A + L Sbjct: 365 IGVSGGLDSTLALLVASLAFDKLGYNRKGIIGVTMPGFGTTDRTYSNAITLMQKLDITIR 424 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + V F+ + + + EN Q+R R ILM +SN + +++ T + SE+ Sbjct: 425 EINISESVKQHFADIEHDINLHNT--TYENSQARERTQILMDISNQAGGIVIGTGDLSEL 482 Query: 412 SVGYGTLYGD 421 ++G+ T GD Sbjct: 483 ALGWCTYNGD 492 >gi|153870829|ref|ZP_02000144.1| glutamine-dependent NAD(+) synthetase [Beggiatoa sp. PS] gi|152072702|gb|EDN69853.1| glutamine-dependent NAD(+) synthetase [Beggiatoa sp. PS] Length = 456 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 134/275 (48%), Gaps = 43/275 (15%) Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI-------AVDALGK 318 + P +EE A L L DY++K+ H ++ LSGG DS+ A + V LG Sbjct: 104 HTPNLKEEEFTRAVSLGLFDYLRKSRSHGFVLSLSGGADSSTIACLVRFMVELGVAELGI 163 Query: 319 E----NVQTIMLPYKYTSP----------QSLED--------AAACAKALGCKYDVLPIH 356 + + I LP + S Q+ E+ A AK LG +Y I+ Sbjct: 164 KGFCAKLSYISLPNTHVSDLVKSLLTCVYQATENSSRVTRLAAETLAKNLGAEYFQFNIN 223 Query: 357 DLVNHFFSLMSQFLQEEPSG----IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 LV + SL+SQ LQ+E + I +NIQ+R R + +N A+LL TSN+SE++ Sbjct: 224 KLVKGYLSLVSQVLQQELTWEKHDIALQNIQARARSPSVWLFANLKNALLLATSNRSEVA 283 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL--EKSPS 470 GY T+ GD SGG +PL + K + W G T L P IP L ++ P+ Sbjct: 284 QGYATMDGDTSGGLSPLAGIDKDFLRHWLRWTELEGPTQ-LTP----IPTLALVNQQEPT 338 Query: 471 AELRPH---QTDQESLPPYPILDDIIKRIVENEES 502 AELRP QTD+ L PYP+L+ I K + + ++ Sbjct: 339 AELRPREMVQTDEADLMPYPLLNVIEKAAIRDRQT 373 >gi|114326951|ref|YP_744108.1| NAD synthetase [Granulibacter bethesdensis CGDNIH1] gi|114315125|gb|ABI61185.1| glutamine-dependent NAD(+) synthetase [Granulibacter bethesdensis CGDNIH1] Length = 702 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 127/537 (23%), Positives = 215/537 (40%), Gaps = 85/537 (15%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 A+ QG+ +++F EL +SGY +DLV + + A +AI L + + IV+G P + Sbjct: 60 RADAQGVAVVVFPELCLSGYAIDDLVQQDVLLDAVDAAIGALLRRSAGWMSVIVIGAPVR 119 Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLG----- 146 + N+ ++L G ++ V K LPNY EF+E+R F G S + + IR+G Sbjct: 120 QGGRLFNAAIVLHRGRVLGVVPKSYLPNYREFYERRHFTPGLS---VQGQSIRIGDEDAP 176 Query: 147 ------------------ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 + ICED+W + GA L +L+ SP + R Sbjct: 177 FGTDLLFAAEDVEGLILHVEICEDMWMPVSPASLGALNGATVLANLSGSPITIGRADSRA 236 Query: 189 EIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWH 246 + +Y G+ +L +DG + ++ LA + F+++ M Sbjct: 237 LLSRSASMRCVAATVYAAAGWGESTTDLAWDGQATIYENGTLLA-ETPRFAQEATMAVAD 295 Query: 247 YDQQLSQWNYMS----DDSASTM-----------------------------YIP----- 268 D L M +++ M ++P Sbjct: 296 IDPGLLMQERMRVHGFEENRHAMAGAAMRRIGFRLDPPSRDLGLRRRVERFPFVPADPAR 355 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDAL--GKENVQ 322 Q+ YN V L + K++IG+SGG+DS + AA A+D L + ++ Sbjct: 356 LAQDCYEAYNIQVRGLAQRLSAAKIGKLVIGVSGGLDSTHALIVAARAMDVLQRPRSDIL 415 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ--EEPSGIVAE 380 +P T ++ +A A + LG L I + + E+ I E Sbjct: 416 AYTMPGFATGDETRNNALALMRVLGVSAHELDIRPAARQMLADLEHPFAGGEQVYDITFE 475 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQ 439 N+Q+ +R + L L+N ++L T + SE+++G+ T GD +N + KT + Sbjct: 476 NVQAGLRTDYLFRLANQHNGIVLGTGDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQH 535 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLPPYPILD 490 L W G S VI +IL S EL P Q+ + ++ PY + D Sbjct: 536 LIRWAGGSGDFSD---EARVIFEAILNTEISPELIPVAKGEKPQSTEGTIGPYALHD 589 >gi|218261602|ref|ZP_03476348.1| hypothetical protein PRABACTJOHN_02016 [Parabacteroides johnsonii DSM 18315] gi|218223916|gb|EEC96566.1| hypothetical protein PRABACTJOHN_02016 [Parabacteroides johnsonii DSM 18315] Length = 641 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 122/502 (24%), Positives = 211/502 (42%), Gaps = 68/502 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D NI K +A+ +G+ +I F EL ++ Y DL +++ + Sbjct: 6 VKVAAAVPHIQVADCFYNIEKIEGLMRQASEKGVQIIAFPELSVTAYTCLDLFAQQTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ L S+T D +VG P + ++N+ V+ G I V K LPNY EF Sbjct: 66 GAETALLQLVSNTADLNILAIVGVPLRTGNQLINAAVVFQKGVIRGVVPKTYLPNYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQG 167 E+R F S G P ++FR + +GI ICED+W L +G Sbjct: 126 EQRWFTSATELRTSTISIGEEEYPMGSHLLFRSGQLTIGIEICEDLWVPVPPSSLLAMEG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANIIFNLSASNELIGKHTYLRSLICQQSARCMAGYVYASSGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLAFQMKHFSEQNFM----------------TEWHY--------DQQLSQWNYMSDDS 261 LA + E+ + T + Y Q+ + + D Sbjct: 246 GNLLAESPRFTMEEQLVISEIDIETLQNDRQVNTSFMYGASGLLKEKAQVVDFQVRTPDG 305 Query: 262 ASTM-------YIP----LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 S + P L+E E ++ V L + + ++G+SGG+DS L Sbjct: 306 FSLTRPIDPHPFTPSGDALKERCEEIFHIQVAGLAKRLIHAHAQTAVVGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + V DAL + + I +P T+ ++ +A ++LG + I + + HF Sbjct: 366 LVTVMTFDALKIPRGQIIGITMPGFGTTDRTYTNACDLIRSLGVTLKEISIKEACLQHF- 424 Query: 364 SLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + + PS + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 425 ----RDIDHGPSVHDVTYENSQARERTQLLMDVANQKNGLVIGTGDLSELALGWATYNGD 480 Query: 422 MSGGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 481 HMSMYGVNGSIPKTLVKYLVEW 502 >gi|15611380|ref|NP_223031.1| NAD synthetase [Helicobacter pylori J99] gi|8928241|sp|Q9ZMB0|NADE_HELPJ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|4154831|gb|AAD05885.1| NH(3)-DEPENDENT NAD+ SYNTHETASE [Helicobacter pylori J99] Length = 260 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 119/232 (51%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY ++ L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIVYLCDFLEKEVQKKGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + F ++ S N +R Sbjct: 61 SVSMPESRTDALNLCEKFSIPYTEYSIAPYDKIFGSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA + N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELAYYLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|224983478|pdb|3DLA|A Chain A, X-Ray Crystal Structure Of Glutamine-Dependent Nad+ Synthetase From Mycobacterium Tuberculosis Bound To Naad+ And Don gi|224983479|pdb|3DLA|B Chain B, X-Ray Crystal Structure Of Glutamine-Dependent Nad+ Synthetase From Mycobacterium Tuberculosis Bound To Naad+ And Don gi|224983480|pdb|3DLA|C Chain C, X-Ray Crystal Structure Of Glutamine-Dependent Nad+ Synthetase From Mycobacterium Tuberculosis Bound To Naad+ And Don gi|224983481|pdb|3DLA|D Chain D, X-Ray Crystal Structure Of Glutamine-Dependent Nad+ Synthetase From Mycobacterium Tuberculosis Bound To Naad+ And Don Length = 680 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 125/562 (22%), Positives = 227/562 (40%), Gaps = 81/562 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 13 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 73 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 132 Query: 125 EKRTFISGYSNDPIVF---RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G + D+ G + ICED++ Sbjct: 133 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 193 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 252 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 253 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 311 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 312 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 370 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 371 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 430 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G Sbjct: 431 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALG 490 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 491 WSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPEL 547 Query: 474 RPH-----QTDQESLPPYPILD 490 P Q+ + + P+ + D Sbjct: 548 IPTGEEELQSSEAKVGPFALQD 569 >gi|254232573|ref|ZP_04925900.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis C] gi|254365215|ref|ZP_04981261.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis str. Haarlem] gi|289746221|ref|ZP_06505599.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis 02_1987] gi|289751045|ref|ZP_06510423.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T92] gi|289754547|ref|ZP_06513925.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis EAS054] gi|13882232|gb|AAK46810.1| NH(3)-dependent NAD(+) synthetase, putative [Mycobacterium tuberculosis CDC1551] gi|124601632|gb|EAY60642.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis C] gi|134150729|gb|EBA42774.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis str. Haarlem] gi|289686749|gb|EFD54237.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis 02_1987] gi|289691632|gb|EFD59061.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T92] gi|289695134|gb|EFD62563.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis EAS054] gi|326904053|gb|EGE50986.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis W-148] Length = 738 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 125/562 (22%), Positives = 227/562 (40%), Gaps = 81/562 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 71 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 130 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 131 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 190 Query: 125 EKRTFISGYSNDPIVF---RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G + D+ G + ICED++ Sbjct: 191 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 250 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 251 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 310 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 311 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 369 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 370 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 428 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 429 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 488 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G Sbjct: 489 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALG 548 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 549 WSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPEL 605 Query: 474 RPH-----QTDQESLPPYPILD 490 P Q+ + + P+ + D Sbjct: 606 IPTGEEELQSSEAKVGPFALQD 627 >gi|160915475|ref|ZP_02077686.1| hypothetical protein EUBDOL_01483 [Eubacterium dolichum DSM 3991] gi|158432595|gb|EDP10884.1| hypothetical protein EUBDOL_01483 [Eubacterium dolichum DSM 3991] Length = 563 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 135/542 (24%), Positives = 234/542 (43%), Gaps = 84/542 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ +N + G N + ++A + +D+I+F + ISGY D ++ + Sbjct: 14 MKVALVTMNVLQGKCEENFSFMMDKIQQAKKDHVDMIVFPQNAISGYLLGDQWLDDAWCR 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVI-LDAGNIIAVRDKINLPNYSEF 123 S D L ++ D IV G R + N+ + V+ +N +Y Sbjct: 74 YVDSFNDRLVEESED--IAIVWGNIRYRNQRRFNAAFFAYQKKTHMRVKKNVN-ADYQ-- 128 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 + R F N I F++ L + +I A+ +++A PY Sbjct: 129 CDARYFEESSINSAIEFKNYVLALNFQNEI------------TLADLNINIDAHPY---- 172 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 E G +V +YVN VG G++ ++ G S+ + Q++L +Q +F Sbjct: 173 ---DMEEANGLYGNV----VYVNAVGMQNQGKNVMVMQGGSYVHN-QRKLLYQASYFQAD 224 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK--NNFHKVII 297 + + H +++ P ++ D A L +R++ ++ N II Sbjct: 225 YAVVDIHAQKEVQ---------------PQKKHLLD--ALTLGIREFDKQIFNAKMPWII 267 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DS++ A+ ALG + V + KY ++ +A A ALG Y I Sbjct: 268 GLSGGLDSSVSCALLAYALGAKRVHGFNMATKYNRDTTISNAQKEAAALGIHYHDGSIQM 327 Query: 358 LVNHFFSLMSQFLQE------EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 LV+ + FL+E + S +V ENIQ+R RG +L + ++ NK E Sbjct: 328 LVD---ASRDTFLKEYGFDAQKDSTLVMENIQARARGYLLGGFAGILGGVIANNGNKVEY 384 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL------ 465 +GY TLYGD G + + DL K Q+F LA N EV+P ++L Sbjct: 385 MLGYCTLYGDSVGALSLIGDLTKVQLFALAEELNKRFA-------KEVVPMNLLPVLEEN 437 Query: 466 ----EKSPSAELRPHQTDQESLPPYPILDDIIKR---IVENEESFINNDQEYNDETVRYV 518 E +PSAEL+ Q D + L D + R ++ E ++N+ E +E ++++ Sbjct: 438 KLHWEMAPSAELKEDQYDPMKWFYHDYLVDHLGRDLDVLSLMEGYLNHTLE--EELMKWI 495 Query: 519 EH 520 ++ Sbjct: 496 KY 497 >gi|296132671|ref|YP_003639918.1| NAD+ synthetase [Thermincola sp. JR] gi|296031249|gb|ADG82017.1| NAD+ synthetase [Thermincola potens JR] Length = 648 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 135/619 (21%), Positives = 240/619 (38%), Gaps = 101/619 (16%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V D A NI++ + +EA+ + + +++F EL I+GY DL +K ++ + L Sbjct: 18 VADPAYNISEILKIVKEADEKNVAVLVFPELSITGYTCADLFGQKLLLEKAVEFLGELLQ 77 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 T +VG P + + N V + G I+ KI+LPNY EF+EKR F SG+ Sbjct: 78 QTETLDVLTIVGLPLMVEHKLFNCGVAVHRGRILGAVPKIHLPNYKEFYEKRWFTSGHVL 137 Query: 136 DPIVFR--------------------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 V LG+ ICED+W +L GA+ + +L+ Sbjct: 138 GQSVSEINLLGQYVPCGRIMIKAEKPSFLLGMEICEDLWAVIPPSSYLALNGADIIANLS 197 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYV----------------NQVGGQDELIFDGA 219 A +K R +++ Q + IY N + L+ + Sbjct: 198 AGNELVSKADYRRQLILQQSARCMCGYIYASAGVYESTTDLVFGGHNMIAENGILLKESE 257 Query: 220 SFCFD-------------------------------GQQQLAFQMKHFSEQNFMTEWHYD 248 F D G + F ++ M + + Sbjct: 258 RFKRDSSLIITEIDVERLASERMLNKTYADNYEINAGSRNFVIVETEFLKEYDMEDIGLE 317 Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEAD--YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + ++ + ++ + A+ EE +N V L +Q N V++G+SGG+DS Sbjct: 318 RPVAPYPFVPGNPATV------EERCREIFNIQVAGLAKRLQHTNMKHVVLGISGGLDST 371 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + L EN+ + +P T+ + +A KAL + I Sbjct: 372 LALLVTAQTFDTLHLPAENIVAVTMPGFGTTDITYTNALDLMKALHVTIREIDIKPACLQ 431 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + +Q+ I EN+Q+R R ILM L+N+ +++ T + SE+++G+ T GD Sbjct: 432 HFKDIGHNVQD--LDITYENVQARERTQILMDLANNIGGLVVGTGDLSELALGWATYNGD 489 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSAELRPH 476 ++ + KT V L W + + L I P +L S ++ Sbjct: 490 HMSMYSVNCSIPKTLVKFLVRWVADNIVNEQTAEVLQKILNTPISPELLPPDTSGKIA-- 547 Query: 477 QTDQESLPPYPILDDIIKRIVE-----NEESFINN---DQEYNDETVRYVEHLLY----G 524 Q ++ + PY + D + V + F+ + ++Y+ E ++ + Y Sbjct: 548 QKTEDLIGPYELHDFFLYYTVRFGMHPKKVLFLADCAFKEKYSREEIKKWLKVFYNRFFS 607 Query: 525 SEYKRRQAPVGTKITAKSF 543 ++KR P G K+ S Sbjct: 608 QQFKRSCLPDGPKVGTVSL 626 >gi|18310040|ref|NP_561974.1| NAD synthetase [Clostridium perfringens str. 13] gi|18144719|dbj|BAB80764.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 553 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 123/546 (22%), Positives = 235/546 (43%), Gaps = 98/546 (17%) Query: 84 IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS--------- 134 + VG P + + N ++ G ++ + K +PNYSEF+EKR F G++ Sbjct: 1 MAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYSEFYEKRWFTEGFNIKGLNVDLD 60 Query: 135 --------NDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 D I F+++++G ICED+W +L GA + +L+AS +K Sbjct: 61 FQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNLALMGANLICNLSASNELVSKSS 120 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDGAS---------------------- 220 R +V Q + IY + G + +L+F G Sbjct: 121 YRKSLVQNQSARTMCSYIY-SSAGVHESTTDLLFSGHMIIAENGTIIKENNRFKRENDLL 179 Query: 221 ------FCFDGQ--QQLAFQMKHFSEQN------FMTE----WHYDQQLSQWNYMSDDSA 262 F D + + ++F+ F+E N F E ++D+++ + ++ Sbjct: 180 TGIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLENTEIKNFDREIDKHPFL----P 235 Query: 263 STMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LG 317 + Y E N +L ++ N K +IG+SGG+DS L + V + Sbjct: 236 KSQYAMEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGLDSTLALLVVVKTFDMLNIP 295 Query: 318 KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 +EN+ TI +P T+ ++ +A K L C + + I + F + ++ + Sbjct: 296 RENIITITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNAALQHFEDIGH--DKDIHDV 353 Query: 378 VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 EN+Q+R R ILM L+N +L+ T + SE+++G+ T GD ++ + KT V Sbjct: 354 TYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTYNGDHMSMYSVNCSIPKTLV 413 Query: 438 FQLASWRNSHGITSG-----LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDI 492 L ++ +H I++ L L + P +L K ++ Q ++ + PY + D Sbjct: 414 RFLVNYFANHEISNDAKEALLDILDTPVSPELLPKDKEGKIA--QKTEDIVGPYELHDFF 471 Query: 493 IKRIVEN-----------EESFINNDQEYNDETV-RYVEHLL---YGSEYKRRQAPVGTK 537 + +++ +E+F N +Y++ET+ ++++ + + ++KR P G K Sbjct: 472 LYHFIKHGSSPERILFLAKEAFKN---DYDEETLKKWLDKFIRRFFTQQFKRSALPDGPK 528 Query: 538 ITAKSF 543 + + S Sbjct: 529 VGSISL 534 >gi|291458959|ref|ZP_06598349.1| putative NH(3)-dependent NAD(+) synthetase [Oribacterium sp. oral taxon 078 str. F0262] gi|291418213|gb|EFE91932.1| putative NH(3)-dependent NAD(+) synthetase [Oribacterium sp. oral taxon 078 str. F0262] Length = 666 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 126/552 (22%), Positives = 217/552 (39%), Gaps = 93/552 (16%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 EA +G L++ EL ++GY DL + + A+ L S T + IV+G P Sbjct: 33 EAAEKGAGLLVLPELCLTGYTAGDLFLQSELQEGALRALSWLLSKTRELPLLIVLGLPLS 92 Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN-------DPIV----- 139 + NS +L G ++ K NLPNYSEF+E+R F DP+ Sbjct: 93 FSGKLYNSAAVLHRGRVLGFVPKKNLPNYSEFYERRWFSPAEDGIFEYLYRDPLTKDCCS 152 Query: 140 -------------FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 D L + +CED+W + GA + + +AS K Sbjct: 153 LPFGMRLLFQAEDLPDFCLALELCEDLWVPNPPSTEHAAAGAYLIANCSASDETVGKADY 212 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R E++ + + +Y N G+ +L+F G S + LA + + F+ ++E Sbjct: 213 RRELLRSASARICAAYLYANAGEGESTQDLVFGGQSMIAENGSILA-ESRRFTTGLTISE 271 Query: 245 WHYD----QQLSQWNYMSDDSASTMYIPLQ------------------------------ 270 + ++ Y + + IP + Sbjct: 272 IDLERIRQERTRLGTYPAPRAEGYRRIPFRFFEGGRPSFLSGSSFSGGSGEDGSLFRRID 331 Query: 271 ---------EEEADYNACVLSLRDYVQKNNFHKV-----IIGLSGGIDSALCAAIAVDA- 315 EE A +LS++ K + ++G+SGG+DS L + A Sbjct: 332 PHPFVPSSGEERARRCEEILSIQALGLKKRLSHIGTKQAVLGISGGLDSTLALLVTARAF 391 Query: 316 ----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 + +EN+ ++ +P T+ ++L++A +A+G + I V F + Sbjct: 392 DLLKIPRENILSVTMPAFGTTKRTLDNARRLTEAIGATLREIDIRLSVEQHFRDIGH--D 449 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 + +V EN Q+R R +LM LSN +++ T + SE+++GY T GD + Sbjct: 450 AKKRDVVYENAQARERTQVLMDLSNACGGIVVGTGDLSELALGYATYNGDHMSMYAVNAG 509 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLPP 485 + KT V L + G L+E + IL+ S EL P Q +E + P Sbjct: 510 VPKTLVRHLVRYIAD---IEKRGALSETL-LDILDTPVSPELLPPSGETISQKTEELVGP 565 Query: 486 YPILDDIIKRIV 497 Y + D + +I+ Sbjct: 566 YELHDFFLYQIL 577 >gi|329960868|ref|ZP_08299147.1| NAD+ synthase [Bacteroides fluxus YIT 12057] gi|328532154|gb|EGF58958.1| NAD+ synthase [Bacteroides fluxus YIT 12057] Length = 666 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 121/509 (23%), Positives = 206/509 (40%), Gaps = 70/509 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + A+ +G+ +I F EL ++GY DL ++ ++ Sbjct: 32 VKVAAAVPRVKVADCKFNASEIEKEIIIADGKGVQIIAFPELCVTGYTCGDLFAQQLLLE 91 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 92 EAEMGLMQILNNTRQLDIISILGMPVALNGVLLNTAVVIQKGKVLGVVPKTYLPNYKEFY 151 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S R D GI ICED+W L QG Sbjct: 152 EKRWFTSACEVSETSVRLCGQIIPMGRNLLFDTADTTFGIEICEDLWAPVPPSSALALQG 211 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPII--YVNQVGGQDE----LIFDGASF 221 AE LF+L+A N+ +H + IS I YV G E ++F G Sbjct: 212 AEILFNLSAD----NEGIGKHAYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGL 267 Query: 222 CFDGQQQLAFQMK-HFSEQNFMT----EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADY 276 ++ LA + F EQ ++ E+ ++ + + S S +P+ Sbjct: 268 IYENGSLLAAGKRFSFEEQVVISEIDVEYLRTERRVNTTFAACRSCSAPELPVHVAAEYV 327 Query: 277 NACVLSLRDYVQKNNF-------------------------------HKVIIGLSGGIDS 305 N+ L+L + F +IG+SGG+DS Sbjct: 328 NSKDLNLTRTFDPHPFVPQGATLDERCEEVFSIQVSGLAQRLVHTKAKSAVIGISGGLDS 387 Query: 306 ALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V D LG ++ + + +P T+ ++ +A +LG + I + Sbjct: 388 TLALLVCVKTFDKLGWARKGIIGVTMPGFGTTDRTYTNAMDLMNSLGITVREVSIKEACI 447 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T G Sbjct: 448 QHFKDIDH--DADVHDVVYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNG 505 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 D + + KT V L W +G+ Sbjct: 506 DHMSMYGVNGSVPKTLVRHLVKWVAENGM 534 >gi|325268980|ref|ZP_08135601.1| NAD synthetase [Prevotella multiformis DSM 16608] gi|324988601|gb|EGC20563.1| NAD synthetase [Prevotella multiformis DSM 16608] Length = 656 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 122/492 (24%), Positives = 204/492 (41%), Gaps = 78/492 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+A+ + A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPAVKVADTKFNLAETEKQIAIAEGKGVEVIVFPELSLTGYSCQDLFHQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L T +VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 NAEQAVLSLLDFTRQLDITAIVGAPVAVGPLLLNCALVIQQGRLLGIVAKTFLPNYSEFY 125 Query: 125 EKRTFISG----------------YSNDPIVFRD---IRLGILICEDIWKNSNICKHLKK 165 EKR F S + D +FR + I ICED+W + HL Sbjct: 126 EKRWFASSQDLRPQRIHFAGHRILVTPDMQIFRTAQGAKFAIEICEDVWAPTPPSNHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV---------NQVGGQDELIF 216 GAE +F+L+AS K ++ Q + +Y + V G + LIF Sbjct: 186 AGAEIIFNLSASDELIGKHAYLKSLLAQQSARTISGYVYSSCGFGESTQDVVYGGNALIF 245 Query: 217 DGAS-------FCFDGQQQLA-FQMKHFSEQNFMTEWHYDQQ------------------ 250 + S F D Q ++ ++ + + Q Sbjct: 246 ENGSLLEQSDRFRLDAQLIISEIDVERLRSERRTNSTFVNAQRPVAAGLAGITGQAGELG 305 Query: 251 -----LSQWNYMSDDSASTMY-----IPLQEEEAD-----YNACVLSLRDYVQKNNFHKV 295 L N M + + + + IP E D +N V L + N V Sbjct: 306 MRVDCLPPANPMREFTLTRRFTPHPFIPGTENMKDVCEEIFNIQVSGLAKRLVHTNCRTV 365 Query: 296 IIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 IIG+SGG+DS L +AV D LG ++ + + +P T+ ++ +A + LG Sbjct: 366 IIGISGGLDSTLALLVAVRTFDKLGLDRKGIVGVTMPGFGTTDRTYRNAMTLMENLGITI 425 Query: 351 DVLPI-HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + I ++ HF + + + EN Q+R R ILM LSN +++ T + S Sbjct: 426 REVNIAASVLQHFKDIGHDAAVHD---VTYENAQARERTQILMDLSNQLGGLVIGTGDLS 482 Query: 410 EISVGYGTLYGD 421 E+++G+ T GD Sbjct: 483 ELALGWCTYNGD 494 >gi|108800509|ref|YP_640706.1| NAD synthetase [Mycobacterium sp. MCS] gi|119869648|ref|YP_939600.1| NAD synthetase [Mycobacterium sp. KMS] gi|126436125|ref|YP_001071816.1| NAD synthetase [Mycobacterium sp. JLS] gi|108770928|gb|ABG09650.1| NAD+ synthetase [Mycobacterium sp. MCS] gi|119695737|gb|ABL92810.1| NAD+ synthetase [Mycobacterium sp. KMS] gi|126235925|gb|ABN99325.1| NAD+ synthetase [Mycobacterium sp. JLS] Length = 680 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 120/550 (21%), Positives = 217/550 (39%), Gaps = 82/550 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +IA + + D GN R + + L +F EL ++GY ED+V + ++A Sbjct: 13 RIAACTHHTSIADPKGNAESVLRMARDCHDDNAALAVFPELTLTGYSIEDIVMQDGLLEA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ + + + + +VVG P + + V N+ V++ G ++ V K +PNY EF+E Sbjct: 73 VEAALLQVVTASAELLPVLVVGAPLRYRHRVYNTAVVIHRGQVLGVVPKSYIPNYREFYE 132 Query: 126 KRTFISGYSNDPIVFRDIRLG-----------------------ILICEDIWKNSNICKH 162 R +G +IR+G + ICED+W Sbjct: 133 NRQIAAGDEERG----EIRVGGQEVPFGPDLLFEATDVPGFVLHVEICEDMWVPVPPSAE 188 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA L +L+ SP + + R + S +Y G+ +L +DG + Sbjct: 189 AALAGATVLANLSGSPITIGRSEDRCLLARSASSRCLAAYVYAAAGEGESTTDLAWDGQT 248 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQL--------------SQWNYMSDDSASTMY 266 ++ LA Q + F + + D QL + + + +DS + Sbjct: 249 MIWENGSCLA-QSERFPKGERRSIADVDLQLLRNERLRMGTFDDNRRHHLIDEDSFRRIE 307 Query: 267 IPLQEEEAD---------------------------YNACVLSLRDYVQKNNFHKVIIGL 299 L D YN V L ++ ++ K+++GL Sbjct: 308 FTLDPPTGDIGLYREVERFPFVPADPARLEQDCYEAYNIQVAGLEQRLRALHYPKIVLGL 367 Query: 300 SGGIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS +A A+ +E ++ LP T + +A A+ALG ++ + Sbjct: 368 SGGLDSTHALIVAARAMDREERPRSDILAFTLPGFATGEHTRNNATRLAEALGVTFETID 427 Query: 355 IHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I + M E+ + EN+Q+ +R + L L+N ++L T + SE++ Sbjct: 428 ITSTAKLMLTEMDHPFSRGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELA 487 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +G+ T GD +N + KT + L W ++ + S+L+ + Sbjct: 488 LGWSTYGVGDQMSHYNVNGGVPKTLIQHLIRWVI---LSKQFDDTVNEVLQSVLDTEITP 544 Query: 472 ELRPHQTDQE 481 EL P D+E Sbjct: 545 ELVPSGEDEE 554 >gi|167969761|ref|ZP_02552038.1| NAD synthetase [Mycobacterium tuberculosis H37Ra] Length = 679 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 124/562 (22%), Positives = 227/562 (40%), Gaps = 81/562 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIVF---RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G + D+ G + ICED++ Sbjct: 132 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 252 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 310 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 311 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 369 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 370 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 429 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G Sbjct: 430 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALG 489 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + + W S G G + S+L+ + EL Sbjct: 490 WSTYGVGDQMSHYNVNAGVPKTLIQHMIRWVISAG---EFGEKVGEVLQSVLDTEITPEL 546 Query: 474 RPH-----QTDQESLPPYPILD 490 P Q+ + + P+ + D Sbjct: 547 IPTGEEELQSSEAKVGPFALQD 568 >gi|289570592|ref|ZP_06450819.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T17] gi|289544346|gb|EFD47994.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T17] Length = 547 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 116/515 (22%), Positives = 209/515 (40%), Gaps = 73/515 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIVF---RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G + D+ G + ICED++ Sbjct: 132 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 252 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 310 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 311 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 369 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 370 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 429 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G Sbjct: 430 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALG 489 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + T GD +N + KT + L W S G Sbjct: 490 WATYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG 524 >gi|219558436|ref|ZP_03537512.1| NAD synthetase [Mycobacterium tuberculosis T17] Length = 606 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 116/515 (22%), Positives = 209/515 (40%), Gaps = 73/515 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 71 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 130 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 131 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 190 Query: 125 EKRTFISGYSNDPIV---FRDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G + D+ G + ICED++ Sbjct: 191 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 250 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 251 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 310 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 311 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 369 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 370 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 428 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 429 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 488 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G Sbjct: 489 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALG 548 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + T GD +N + KT + L W S G Sbjct: 549 WATYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG 583 >gi|303239669|ref|ZP_07326194.1| NAD+ synthetase [Acetivibrio cellulolyticus CD2] gi|302592840|gb|EFL62563.1| NAD+ synthetase [Acetivibrio cellulolyticus CD2] Length = 640 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 136/609 (22%), Positives = 251/609 (41%), Gaps = 88/609 (14%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V + N A+ ++A+++ + ++F EL I+ Y DL + + ++ S ++ + Sbjct: 17 VANCEYNAAQIVELIKKADKEYVKFLVFPELCITAYSCGDLFHQDALLKEASKQLENILE 76 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS- 134 +T + ++G P + N V++ +G I+ K +PNYSEF+E+R F +G Sbjct: 77 NTKNTDLVAIIGIPLSLNNQLFNCAVVIQSGKILGAVPKTFIPNYSEFYEERWFATGNKA 136 Query: 135 ----------NDP----IVFR-----DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 N P I+F D+ GI ICED+W + G+ +F+ + Sbjct: 137 LSDTINICGHNVPFGVDILFENRENSDLCFGIEICEDLWVPIPPSSYQCMYGSTLVFNTS 196 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYV--NQVGGQDELIFDGASFC----------- 222 AS K + R E+V Q + +Y N +++F G + Sbjct: 197 ASNELIGKYEYRRELVRQQSARCIAGYVYTSSNTNESTTDVVFGGHALISEYGSILSESQ 256 Query: 223 -FDGQQQLAF-----------QMKHFSEQNFMTEWHY-----DQQLSQWNYMSDDSASTM 265 F +QL + + K+ S + E Y +Q SQ + Sbjct: 257 RFVDDEQLIYSEIDIQKLINDRRKNTSFMEGVVEKKYRRILFEQSESQSLALVRHVPPHP 316 Query: 266 YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV---DAL 316 ++P D ++ +L ++ +IG+SGG+DS L + + L Sbjct: 317 FVPSDTGNRDVRCKEIFSIQTSALAKRIKHTGLKHAVIGISGGLDSTLALLVTAKTYELL 376 Query: 317 G--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 G +N+ I +P T+ + +A KA+ + I+D F + Sbjct: 377 GIPADNIIAITMPGFGTTNATYTNAMELMKAMNVNIREININDACLQHFKDIGH--DANI 434 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 + EN+Q+R R ILM L+N +++ T + SE+++G+ T GD ++ + K Sbjct: 435 HDVTYENVQARERTQILMDLANKLGGLVIGTGDLSELALGWCTYNGDHMSMYSVNCSIPK 494 Query: 435 TQVFQLASWRNSHGITSGLGP-----LTEVIPPSILEKSPSAELRPHQTDQESLPPYPIL 489 T V L W + + + L I P +L PSAE +Q ++ + PY + Sbjct: 495 TLVKFLVKWVAENMVDKNVKEILDRILDTPISPELL--PPSAEGEINQKTEDIVGPYELH 552 Query: 490 DDII----------KRIVE-NEESFINNDQEYNDETVRYVEHL----LYGSEYKRRQAPV 534 D + K+IV E++F D +Y++E +++ + + ++KR P Sbjct: 553 DFFLYHMIRYGASPKKIVYLAEKAF---DSKYSNEEIKHWLKIFIKRFFIQQFKRSCLPD 609 Query: 535 GTKITAKSF 543 G K+ S Sbjct: 610 GPKVGTISL 618 >gi|76800682|ref|YP_325690.1| NAD(+) synthase (glutamine-hydrolyzing) 2 [Natronomonas pharaonis DSM 2160] gi|76556547|emb|CAI48118.1| NAD(+) synthase (glutamine-hydrolyzing) 2 [Natronomonas pharaonis DSM 2160] Length = 270 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 25/270 (9%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 + EA V + V + V++GLSGG+DS A +AV+ALG E V ++LP Sbjct: 14 DTEAMAAEAVDCIETTVDAADADGVVVGLSGGLDSTTTATLAVEALGSERVYGLVLPSSK 73 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 +S +DA A LG ++ + + L+ F ++ + +V N+ +R+R ++ Sbjct: 74 LGSKSAQDAETVADVLGIDHETIHLQPLLACFGDMVPGPVDLHGDPVVRGNLVARLRMSM 133 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L +N + +++ T+N+SE +GY T +GD + PL LYKT+V +LA Sbjct: 134 LYLTANAMERLVVGTTNRSEHLLGYFTKHGDGAADVLPLAHLYKTEVERLADALE----- 188 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEE------SF 503 +PP I EK P+A P Q+D+ PY +D ++KR+V ++ S Sbjct: 189 ---------VPPFIAEKPPTAGFYPGQSDRADFGAPYTTVDAVLKRLVADDRTTDAICSE 239 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 + D D R+ E + +KRR+ P Sbjct: 240 LGVDAAVVDRVKRHHEQ----TAHKRRRPP 265 >gi|108562758|ref|YP_627074.1| NAD synthetase [Helicobacter pylori HPAG1] gi|123247027|sp|Q1CUH2|NADE_HELPH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|107836531|gb|ABF84400.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori HPAG1] Length = 260 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 119/232 (51%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY ++ L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIVYLCDFLEKEVQKKGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P++ DA + K +Y + P + F ++ S N +R Sbjct: 61 SASMPENKTDALSLCKKFSISYTEYSIAPYDAIFGSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|317132891|ref|YP_004092205.1| NAD+ synthetase [Ethanoligenens harbinense YUAN-3] gi|315470870|gb|ADU27474.1| NAD+ synthetase [Ethanoligenens harbinense YUAN-3] Length = 644 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 115/475 (24%), Positives = 188/475 (39%), Gaps = 64/475 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ V D A N R E+A + L++F EL ++GY DL ++ + Sbjct: 6 IRAAVVSPRITVADCAENARVIGRWMEQAEGKQAGLVVFPELCLTGYTCGDLFLHQTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A SA++TL ++ A +VVG P + + + N +L G ++ V K LPNY+EF+ Sbjct: 66 AAESALETLLKESRGFDAVMVVGLPVRRTK-LYNCAAVLHRGRLLGVVPKTYLPNYAEFY 124 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R F SG V D G+ ICED+W L Sbjct: 125 EQRHFTSGVRAGGTVTLAGQEAPFGTDLLFACENLPDFVFGVEICEDVWVPVPPSCRLAL 184 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K IV Q +Y G+ +L+F G Sbjct: 185 AGATVIANLSASTQVAGKAAYLRGIVGTQSGRCISGYLYAGSGEGESSTDLVFSGHLIVA 244 Query: 224 D----------GQQQLA--FQMKHFSEQ-NFMTEWHYDQQLSQWNYMSDDSASTMYIPL- 269 + G+ LA M+ +E+ T + + + + Y PL Sbjct: 245 ENGRILEEREGGEGMLAADLDMQLLAEERRRTTSFGAEGEAGGCRRVPFRLTPVRYAPLL 304 Query: 270 ----------QEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 E E C L + ++ +SGG+DS L +A Sbjct: 305 RLVGRHPFVPPEGERYRERCKEVLDIQTAGLAKRLAHTRAKTAVVAVSGGLDSTLALLVA 364 Query: 313 VDALGKEN------VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A+ EN + I +P TS ++ +A A +++G V+PI V + Sbjct: 365 HRAI--ENAGLSCAITAITMPGPGTSGRTRGNADALCRSIGATLKVIPISGAVEGH---L 419 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + + EN Q+R R I M +SN +++ T + SE+++G+ T GD Sbjct: 420 ADIGHDGSPDTAFENAQARERMQIAMDVSNMEGGIVVGTGDMSELALGFTTYNGD 474 >gi|167763453|ref|ZP_02435580.1| hypothetical protein BACSTE_01827 [Bacteroides stercoris ATCC 43183] gi|167698747|gb|EDS15326.1| hypothetical protein BACSTE_01827 [Bacteroides stercoris ATCC 43183] Length = 641 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 126/552 (22%), Positives = 223/552 (40%), Gaps = 71/552 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A + V D N + + A+ +G+ +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAASVPRVRVADCKFNAGQIEKEIIIADGKGVQIIAFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G I+ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQMDIISILGMPVPLNGVLLNTAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S R D GI ICED+W L QG Sbjct: 126 EKRWFTSACEVSETTARLCGQIVPMGRNLLFETADTTFGIEICEDLWAPIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNLSADNEGIGKHAYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMSDDSA-------------STMYI---- 267 LA + F EQ ++E + ++ + +A ST Y+ Sbjct: 246 GTLLAGSERFSFEEQVVISEIDVEHIRTERRVNTTFAACRANCAPEVPVRVSTEYVNSKD 305 Query: 268 -----------------PLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 L E E ++ V L + N ++G+SGG+DS L Sbjct: 306 LNLTRVFDPHPFVPQGAALDERCEEIFSIQVSGLAQRLLHTNAKSAVVGISGGLDSTLAL 365 Query: 310 AIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + V K + + + +P T+ ++ +A +LG + I D + HF Sbjct: 366 LVCVKTFDKLSWNRKGIIGVTMPGFGTTDRTHTNAVDLMASLGVTMREVSIKDACIQHFK 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDINVHD---VVYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRPHQT 478 + + KT V L W + I + L + I P ++ + +R Q Sbjct: 483 SMYGVNGSIPKTLVKHLVKWVAENDIDETSRATLLDIVDTPISPELIPADENGNIR--QI 540 Query: 479 DQESLPPYPILD 490 ++ + PY + D Sbjct: 541 TEDLVGPYELHD 552 >gi|261416210|ref|YP_003249893.1| NAD+ synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372666|gb|ACX75411.1| NAD+ synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326885|gb|ADL26086.1| NAD+ synthetase, glutamine-dependent [Fibrobacter succinogenes subsp. succinogenes S85] Length = 664 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 116/519 (22%), Positives = 204/519 (39%), Gaps = 87/519 (16%) Query: 9 IAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 A ++PV V D A N + ++ +EA G ++F EL I+GY DL ++ +Q Sbjct: 7 FASVSPVLKVADTAYNTEEIIKSAKEAASNGAAFVVFPELCITGYTCSDLFHQELLLQNS 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +A+ + D + VG P + + N L G +IAV KI+LPN EF+EK Sbjct: 67 FNALLKIAGAFADSDVVLAVGLPLRMFGRLYNCAAFLQHGKLIAVTPKIHLPNQREFYEK 126 Query: 127 RTFISGY---------------------------------------SNDPIVFRDIRLGI 147 R F SG + ++R+G+ Sbjct: 127 RHFSSGRDLLRGAVGGSVGAIRCYFDGVGEVPVTNYFTVKCGALGQNGSECAGSEVRVGV 186 Query: 148 LICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ 207 +CED+W L GA + +L+AS K R +V Q + +Y + Sbjct: 187 ELCEDLWTPVPPSGELALAGANVIVNLSASDALVGKRDYRRNLVLNQSARCMAAYVYASA 246 Query: 208 VGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSD 259 + +++F G + +A + K FS + + D Q+LS+ ++ Sbjct: 247 GVHESTTDMVFSGHLMIAENGSLIA-ESKPFSRETEIVYADVDVERLNMQRLSEGSFQDF 305 Query: 260 DSASTM------------------------YIPLQEEEAD------YNACVLSLRDYVQK 289 DS + ++P E D +N L ++ Sbjct: 306 DSREIVARAASFDGLRAVEKLQYRFVSPMPFVPGSLESRDQSCTEIFNIQCAGLAKRLEA 365 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAK 344 + + +IGLSGG+DS L + + + ++ +P T+ ++ +A A+ Sbjct: 366 SRSKRAVIGLSGGLDSTLALLVVAETFKLLKRPALEILSLTMPGFGTTKRTKNNAVLLAE 425 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + + I D F + + + EN+Q+R R ILM ++N +++ Sbjct: 426 LLGVELRTVSIKDACLQHFKDIGH--DPQKLDVTYENVQARERTQILMDVANGEGGIVIG 483 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 T + SEI++G+ T D + D+ KT V + W Sbjct: 484 TGDLSEIALGWSTYNADHMSMYAVNCDIPKTLVRHIVHW 522 >gi|282879644|ref|ZP_06288375.1| NAD+ synthetase [Prevotella timonensis CRIS 5C-B1] gi|281306592|gb|EFA98621.1| NAD+ synthetase [Prevotella timonensis CRIS 5C-B1] Length = 686 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 123/528 (23%), Positives = 220/528 (41%), Gaps = 87/528 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+ + + ++A QG+++I+F EL I+ Y +DL +K ++ Sbjct: 7 VKVACAVPLVKVADCIYNVEQTKAQIQQAEEQGVEIIVFPELGITSYTCQDLFQQKLLLE 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +I L T +VG P + +LN +++ G I+ V K LP+YSEF+ Sbjct: 67 ASEVSILHLLDFTRQLDVISIVGLPIVVGDLLLNCAMVIQRGQILGVIPKTYLPDYSEFY 126 Query: 125 EKRTFISG----------------YSNDPIVFRD---IRLGILICEDIWKNSNICKHLKK 165 EKR F S + DP ++ ++ G+ ICED+W L Sbjct: 127 EKRWFASSQDLKETTIRYAGQNIVVTPDPQIYTTDDGVQFGVEICEDVWAPVPPSNTLAL 186 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K +++ Q S IY G+ +L++ G + Sbjct: 187 AGADLIFNLSASDAVIGKYDYLKSLLSQQSSRTITGYIYAASGYGESTQDLVYAGNGLIY 246 Query: 224 DGQQQLA----FQMK---HFSE-----------------------QNFMTEWHYDQQLSQ 253 + LA F M+ H ++ F ++ + LS Sbjct: 247 ENGVLLAEGKRFTMESQIHCAQIDIEMLRAERRINSTYVNAQRQVNTFASQRGFSSSLSP 306 Query: 254 WNY-MSDDSASTMYIPL--QEEEADY-------------------NACV-------LSLR 284 + + +++++ YIP E E + ++CV ++L Sbjct: 307 NQFAIFNNTSAIHYIPCIAPENETTFTLEREINPHPFVPAPNLLPDSCVEVLNIQTMALA 366 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDA 339 + ++G+SGG+DS L + V D LG ++ + + +P T+ ++ +A Sbjct: 367 TRLSHIQAKTAVLGVSGGLDSTLALLVCVMTFDKLGLDRKGIIGVTMPGFGTTGRTYHNA 426 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 LG + I V F + Q + + EN Q+R R ILM LSN Sbjct: 427 MDLMHKLGITVKEINIEKSVMQHFEDIGHDPQVQ--DVTYENSQARERTQILMDLSNQLN 484 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 +++ T + SE+++G+ T GD + + KT + L ++ H Sbjct: 485 GLVVGTGDMSELALGWATYNGDHMSMYAVNAGVPKTLLRHLVNYYAQH 532 >gi|183983739|ref|YP_001852030.1| glutamine-dependent NAD(+) synthetase NadE [Mycobacterium marinum M] gi|183177065|gb|ACC42175.1| glutamine-dependent NAD(+) synthetase NadE [Mycobacterium marinum M] Length = 680 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 120/521 (23%), Positives = 215/521 (41%), Gaps = 85/521 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + + G+ L +F EL +SGY ED++ + + + Sbjct: 12 VRVAACTHHTTLGDPAANAASVLGLARQCHDDGVALAVFPELTLSGYSIEDILLQDALLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + + + +V+G P + Q + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVQDALLDVVTASANLLPVLVIGAPLRCQHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISG---YSNDPIVFRDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R +G + D+ G + ICED++ Sbjct: 132 ERRQVAAGDDERGTIRVCGADVPFGPDLLFGASDLPGFVLHVEICEDMFVPIPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATILANLSGSPITIGRAEDRALLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHF-----------------SEQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 + LA + + F SE+ M +D + ++D ++ Sbjct: 252 ENGVLLA-ESERFPRGERRCVADVDTELLRSERLRMGT--FDDNRRHYRSLADSFRPVVF 308 Query: 267 --------IPLQEE-------EAD-----------YNACVLSLRDYVQKNNFHKVIIGLS 300 I L+ E AD YN V L ++ N+ KV+IG+S Sbjct: 309 RLDPPAGDIGLRRELERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALNYPKVVIGVS 368 Query: 301 GGIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS +A A+ +E ++ LP T ++ +A AKALG ++ + I Sbjct: 369 GGLDSTHALIVAARAMDREGRPRSDILAFTLPGFATGDRTKNNAIKLAKALGVSFEEIDI 428 Query: 356 H-------DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 D + H FS E+ + EN+Q+ +R + L ++NH ++L T + Sbjct: 429 TETARLMLDTIGHPFS-----SGEKVYDVTFENVQAGLRTDYLFRIANHRGGIVLGTGDL 483 Query: 409 SEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 SE+ +G+ T GD +N + KT + L W S G Sbjct: 484 SELGLGWSTYGVGDQMSHYNVNAGVPKTLIQHLMRWVISSG 524 >gi|260438659|ref|ZP_05792475.1| glutamine-dependent NAD+ synthetase [Butyrivibrio crossotus DSM 2876] gi|292809253|gb|EFF68458.1| glutamine-dependent NAD+ synthetase [Butyrivibrio crossotus DSM 2876] Length = 635 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 121/496 (24%), Positives = 206/496 (41%), Gaps = 63/496 (12%) Query: 7 IAIAQLNP--VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I A ++P V D N + +EA + + +++F EL ++GY DL + + ++ Sbjct: 6 IRCAAVSPDVTVADPLANELSIKAYMDEAAKNNVSVLVFPELCLTGYTCNDLFLQDTLLK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L T D VG P + N L G II + K NLP+YSEF+ Sbjct: 66 NSLDAVIRLAEYTKDKNFIAFVGLPFMYGNCLYNVAAALCDGRIIGLIPKKNLPSYSEFY 125 Query: 125 EKRTFISGY--------SNDPIVF--------RDIR---LGILICEDIWKNSNICKHLKK 165 E R F G+ N + F +DI +G ICED+W + Sbjct: 126 ETRHFTPGFDECVNITVGNCSVPFGSKLLFACKDIPSLVIGAEICEDVWVPLPPSINHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K + R ++++GQ + + IY N G+ +L+F G + Sbjct: 186 AGATVIVNCSASDETVGKDRYRRDLISGQSARLISAYIYANAGEGESTQDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSAS-------------- 263 + LA + K F + D ++++ + +S D + Sbjct: 246 ENGTVLA-ESKRFKNGIIYGDTDLDRLKNERRRMTTFPNVSKDYTTVYFSLAIKDLSLNR 304 Query: 264 ----TMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 T ++P EE + C + L+ ++ +IG+SGG+DS L + Sbjct: 305 FYNMTPFVPSSVEERELR-CEEILSIQAMGLKKRLKHTGSKHAVIGISGGLDSTLALLVI 363 Query: 313 VDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A + +EN+ +P T+ ++ +A AL + I + VN F + Sbjct: 364 VKAFDMLSIPRENIIAYTMPCFGTTDRTYNNACNLVAALHGTLKEVNIKNAVNIHFEDIG 423 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 Q + I EN Q+R R ILM +N M++ T + SE+++G+ T GD + Sbjct: 424 Q--DPDKHDITYENCQARERTQILMDGANLYNGMVIGTGDLSELALGWATYNGDHMSMYA 481 Query: 428 PLKDLYKTQVFQLASW 443 + KT V L + Sbjct: 482 VNSGIPKTLVRHLVRF 497 >gi|160941169|ref|ZP_02088506.1| hypothetical protein CLOBOL_06062 [Clostridium bolteae ATCC BAA-613] gi|158435730|gb|EDP13497.1| hypothetical protein CLOBOL_06062 [Clostridium bolteae ATCC BAA-613] Length = 659 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 125/565 (22%), Positives = 227/565 (40%), Gaps = 102/565 (18%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A V D N + + +G+ L++F EL ++ Y DL +K+ ++ Sbjct: 6 LRVAAATPKVRVADPQYNAQQIMDLIGQGYSRGVKLMVFPELCLTAYTCADLFGQKALLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + T + +G P + + N+ + G +I V K NLPNYSEF+ Sbjct: 66 RAKEELGRIVRFTDGKDILVFLGLPWERDGKLYNAAAAIQKGRLIGVVPKRNLPNYSEFY 125 Query: 125 EKRTFISGYSNDPI---------------VFR-----DIRLGILICEDIWKNSNICKHLK 164 E R F G + P+ +FR ++ + ICED+W Sbjct: 126 EARNFCPG-NERPVMTCWNGEKVPMGTNLLFRCNTMPELTVAAEICEDVWVPCPPSIRHA 184 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG---- 218 GA + + +AS K RH+++ Q + + +Y N G+ +L+F G Sbjct: 185 LAGATVVVNCSASDETTGKDMYRHDLICSQSARLVCGYVYANAGEGESTQDLVFGGQNII 244 Query: 219 ---------------ASFCFDGQ-QQLAFQMKHFS----------EQNFMT-EWHYDQQL 251 S C D ++L + + S E ++T E+ +D Sbjct: 245 AENGTCLVESRRFINESICADMDLERLDSERRRMSTFPDPAAAREEGGYLTVEFSFDA-- 302 Query: 252 SQWNYMSDDSASTM----------------------YIPLQEEEADYNAC-------VLS 282 +S+DSA + ++P E + + C + Sbjct: 303 -----VSEDSAGSQDTQTHGSTQPGGDVLRYVDPAPFVPRDERQRN-RRCEEILSIQAMG 356 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLE 337 L+ ++ H+ +IGLSGG+DS L + V A + + + I +P T+ ++ Sbjct: 357 LKKRLEHTGCHEAVIGLSGGLDSTLALLVTVRAFDSLRIPRSGIHCITMPCFGTTDRTYN 416 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 +A A +G K + I + V F + + + + EN Q+R R +LM ++N Sbjct: 417 NACTLAGKVGAKLREINIREAVTRHFEDIGHDMDKH--DVTYENSQARERTQVLMDIANE 474 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 +++ T + SE+++G+ T GD + + KT V L + + T L Sbjct: 475 VGGLVIGTGDMSELALGWATYNGDHMSMYGVNGSVPKTLVRHLVRY---YADTCNEKELA 531 Query: 458 EVIPPSILEKSPSAELRPHQTDQES 482 +V+ +L+ S EL P + Q S Sbjct: 532 DVL-LDVLDTPVSPELLPPEDGQIS 555 >gi|254779027|ref|YP_003057132.1| NAD synthetase [Helicobacter pylori B38] gi|254000938|emb|CAX28876.1| NH(3)-dependent NAD(+) synthetase [Helicobacter pylori B38] Length = 260 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY ++ L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIVYLCDFLEKEVQKKGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + F ++ S N +R Sbjct: 61 SASMPESKTDALNLCETFSIPYTEYSIAPYDKIFGSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSNSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|189463554|ref|ZP_03012339.1| hypothetical protein BACCOP_04278 [Bacteroides coprocola DSM 17136] gi|189429657|gb|EDU98641.1| hypothetical protein BACCOP_04278 [Bacteroides coprocola DSM 17136] Length = 644 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 112/509 (22%), Positives = 215/509 (42%), Gaps = 67/509 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + EA+ +G+ +I+F EL ++GY DL + ++ Sbjct: 6 VKVAAAIPLVKVADCQFNAQQTSKLIVEADSKGVQVIIFPELNLTGYSCGDLFGQTLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T +VG P ++N V+ G I+ + K LPNY EF+ Sbjct: 66 QAEIALMQVMNETRQLDIISIVGMPVVVNSTLMNCAVVCQRGKILGIVPKTYLPNYKEFY 125 Query: 125 EKRTFI--SGYSNDPIV----------------FRDIRLGILICEDIWKNSNICKHLKKQ 166 E+R F + +++D +V D+ G+ ICED+W HL + Sbjct: 126 EQRWFAPSTAHADDEMVRICGQHVPVSSDLIFESTDLCFGVEICEDVWATIPPSSHLALK 185 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA+ +F+++A +K + ++ Q + ++ + G+ +++F G + ++ Sbjct: 186 GADVIFNMSADTENISKHQYLRSLLAQQSARCLAGYVFASSGFGESTTDVVFAGNALIYE 245 Query: 225 GQQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY--------IPLQEEEAD 275 LA + F EQ ++E ++ + + +AS IP++ +A+ Sbjct: 246 NGTLLAASERFSFEEQLVVSEIDIERLRGERMVNTTFAASVRTYKDYPVKRIPIEMTKAN 305 Query: 276 -----------------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++ V L + V++G+SGG+DS Sbjct: 306 EDFTLTRAVEPHPFVPAGGKLLDERCEEIFSIQVAGLAKRLVHTGCKTVVVGISGGLDST 365 Query: 307 LCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVN 360 L + V D LG ++ + I +P T+ ++ +A +L + I D + Sbjct: 366 LALLVCVKTFDKLGLSRKGIVGITMPGFGTTDRTYHNALDLMSSLQVTTKEISIRDACIQ 425 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 HF + + + EN Q+R R ILM +N +++ T + SE+++G+ T G Sbjct: 426 HFKDIDHDISVHD---VTYENGQARERTQILMDYANKVGGLVIGTGDLSELALGWATYNG 482 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 D + + KT V L +W G+ Sbjct: 483 DHMSMYGVNASIPKTLVRYLVTWVAETGV 511 >gi|295100992|emb|CBK98537.1| NAD+ synthetase [Faecalibacterium prausnitzii L2-6] Length = 641 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 140/612 (22%), Positives = 249/612 (40%), Gaps = 87/612 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK A + V D N ++ ++A +G+ L +F E ++GY DL +++ Q Sbjct: 6 LKAAALSPSLRVADCNYNASQIVSQLQDAAARGVRLAVFPEFCLTGYTCGDLFLQRTLQQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ T+ + + +VG P + + N +L G ++ + K LPNY EF+ Sbjct: 66 GALDALQTVLDASRELDVVALVGLPLLVRGKLYNCAAVLCGGRLLGLVPKTYLPNYGEFY 125 Query: 125 EKRTFISGYS--------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLKK 165 EKR F G + ++FR LG+ ICED+W Sbjct: 126 EKRQFTPGSTEVENVTVCGQEVPFGTSLLFRCRQMPSFVLGVEICEDLWSALPPSTFHTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG----- 218 GA + +L+AS K + R +V+ Q + + +Y + G+ +++F G Sbjct: 186 AGATVIANLSASDETVGKAEYRRALVSNQSARLLCGYLYASAGHGESTQDMVFAGHDLIA 245 Query: 219 ----------------ASFCFDGQQQLAFQMKHF----SEQNFMTEWHYDQQLSQWNYMS 258 A D Q+ + + ++ S + ++T +D L++ +S Sbjct: 246 ENGALLAETSPFEGGRAETELDCQRMESERARNTSFEPSAEGYLT-VDFDLALTE-TRLS 303 Query: 259 DDSASTMYIPLQEEEADYNACVLSLR---DYVQKNNFH----KVIIGLSGGIDSALCAAI 311 T +IP +E C L L+ D + K H +IG+SGG+DS L Sbjct: 304 RRVDPTPFIP-HDERRRTQRCELILKMQADGLAKRLEHAHAKTAVIGISGGLDSCLALLA 362 Query: 312 AVDA---LGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 AV A LG+ +V + +P T+ ++ +A L + + I + V+ F + Sbjct: 363 AVRAMKQLGRPTGDVLAVTMPCFGTTHRTRSNAEILCDELAVSFTEIDIANTVHSHFRDI 422 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 Q E + EN Q+R+R LM +N + +++ T + SE+++G+ T GD + Sbjct: 423 GQ--DESVLDVTFENGQARVRTLELMDTANRTGGLVVGTGDLSELALGWATYNGDHMSMY 480 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L + ++ L + IL+ S EL P Q + Sbjct: 481 GVNAGVPKTLVRHLVQYEADIAASAEL----RRVLLDILDTPVSPELLPARDGEISQKTE 536 Query: 481 ESLPPYPILDDII----------KRIVENEESFINNDQEYNDET----VRYVEHLLYGSE 526 + + PY + D + +I ++ EY DE +R + + Sbjct: 537 DLVGPYELHDFYLYYVLRFGFGPSKIFRLAKAAFAGRAEYPDEVLYKWLRNFYWRFFAQQ 596 Query: 527 YKRRQAPVGTKI 538 +KR P G K+ Sbjct: 597 FKRSCLPDGPKV 608 >gi|208434277|ref|YP_002265943.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori G27] gi|238064812|sp|B5ZA97|NADE_HELPG RecName: Full=NH(3)-dependent NAD(+) synthetase gi|208432206|gb|ACI27077.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori G27] Length = 260 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY ++ L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIVYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + F ++ S N +R Sbjct: 61 SVSMPESKTDALNLCETFSIPYTEYSIAPYDKIFGSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA + N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERILGYGTLFGDLACAINPIGELFKTEVYELAYYLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|218532293|ref|YP_002423109.1| NAD synthetase [Methylobacterium chloromethanicum CM4] gi|218524596|gb|ACK85181.1| NAD+ synthetase [Methylobacterium chloromethanicum CM4] Length = 690 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 136/552 (24%), Positives = 218/552 (39%), Gaps = 85/552 (15%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 GD A N+A +A+ G L +F EL +S Y EDL+ + + + A + + L + Sbjct: 35 GDPAANVADISGLARQAHGAGAALAVFPELCVSSYAIEDLLLQATLLDAVETGVARLVEE 94 Query: 77 THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG---- 132 + +VVG P + + + N V + G ++ V K LPNY EF+EKR F SG Sbjct: 95 SAGLTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYEKRHFASGAGIT 154 Query: 133 ------------YSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + D I D RL I +CED+W GA + + + Sbjct: 155 AETIRLGGLEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMDAVLAGATVIANPSG 214 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQQQLAFQ 232 SP + R ++T S L YV G E L +DG + + +LA + Sbjct: 215 SPITVGRADSR-ALLTRAASMRGL-CAYVYAAAGTGESTTDLSWDGQTSIDENGVRLA-E 271 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMS----DDSASTMYIP--------LQEEEAD----- 275 + F + +T D L + DD+A P L E+D Sbjct: 272 GQRFPQAPVVTLADIDLDLIAQERLQAGSLDDNARRHGTPPWRTIPFRLDPPESDLGLER 331 Query: 276 ----------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAA 310 YN V L + + +IG+SGG+DS + A Sbjct: 332 RVERFPFVPADPARLAQDCYEAYNIQVAGLAQRLAATGTKRAVIGVSGGLDSTHALIVVA 391 Query: 311 IAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A D LG ++++ LP TS ++ +A A +ALG + + I + M Sbjct: 392 KAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAARQMLADMGH 451 Query: 369 FL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGG 425 E + EN+Q+ +R + L L+N +++ T + SE+++G+ T GD Sbjct: 452 PFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWSTYGVGDQMSH 511 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILEKSPSAELRPH------QT 478 + + KT + L W I SG G ++L+ S EL P Q+ Sbjct: 512 YGVNAGVPKTLIQHLIRWV----IASGQFGEAENRTLRAVLDTEISPELVPASEGEGPQS 567 Query: 479 DQESLPPYPILD 490 + + PY + D Sbjct: 568 TEAKIGPYALQD 579 >gi|308234429|ref|ZP_07665166.1| NAD+ synthetase [Atopobium vaginae DSM 15829] gi|328944276|ref|ZP_08241740.1| NAD synthetase [Atopobium vaginae DSM 15829] gi|327491195|gb|EGF22970.1| NAD synthetase [Atopobium vaginae DSM 15829] Length = 647 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 123/481 (25%), Positives = 199/481 (41%), Gaps = 70/481 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKKSFI 63 +K+A + VG ++ N+A A R LI+ EL I+GY EDL ++ I Sbjct: 6 IKVATRSPHVQVGCVSENVAACYEEILSAYRDDEARLIVLPELSITGYTCEDLFWQAQLI 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 ++ L + A I+VG P + + N ++ G ++ + K LP Y+EF Sbjct: 66 TEAQQGVERLIQKCANLDALILVGAPVSVRSNLYNCAIVFHRGRLLGIVPKHALPTYNEF 125 Query: 124 HEKRTFISG-----------YSNDPIVFR---------DIRLGILICEDIWKNSNICKHL 163 +E R F G +S+ P + + + ICED+W Sbjct: 126 YELRHFTPGEHEVTYINFASFSHVPFGMNQLFTCSSVPQLTVAVEICEDLWTPCPPSIAH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGA 219 GA + +L+AS K R +VT Q HL YV G E L+F Sbjct: 186 ALAGATIICNLSASDAQIGKCAYRRNLVTNQ--SAHLIAGYVYACAGWTESTQDLVFSSH 243 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM-------------- 265 + + LA + K FS TE D L Q + ST+ Sbjct: 244 NLIAENGTLLA-ESKPFSHTGVSTEIDVD-MLDQERRRTSTYTSTIAAIKTYVTTSFDLQ 301 Query: 266 --------------YIPLQEEEADYNA-CVLSLRDY-VQKNNFH----KVIIGLSGGIDS 305 ++P Q E A VLS++ + + K H V++G+SGG+DS Sbjct: 302 VRPCTLTRFIDPHPFVPAQTAELSARAEDVLSIQAHGLAKRLLHTHTKTVVLGVSGGLDS 361 Query: 306 ALC---AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L A A D +G + + + +P T+ ++ +AA A L +PI V Sbjct: 362 TLALLVCARAFDMIGLDRAGIIAVTMPGFGTTERTHGNAAVLADVLHATLKEIPISAAVL 421 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + ++ +V EN Q+R R ILM ++N A+++ T + SE+++G+ T G Sbjct: 422 QHFEDIAHDVHDK--DVVYENSQARERTQILMDIANQEGALVIGTGDLSELALGWATYNG 479 Query: 421 D 421 D Sbjct: 480 D 480 >gi|317013776|gb|ADU81212.1| NAD synthetase [Helicobacter pylori Gambia94/24] Length = 260 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY ++ L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIIYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + F ++ S N +R Sbjct: 61 SVSMPESKTDALDLCETFSIPYTEYSIAPYDKIFGSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVVGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|15790889|ref|NP_280713.1| NAD synthetase [Halobacterium sp. NRC-1] gi|169236634|ref|YP_001689834.1| NAD synthetase [Halobacterium salinarum R1] gi|25090799|sp|Q9HNM7|NADE_HALSA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|229485729|sp|B0R6W9|NADE_HALS3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|10581458|gb|AAG20193.1| NAD+ synthetase [Halobacterium sp. NRC-1] gi|167727700|emb|CAP14488.1| NAD( ) synthase (glutamine-hydrolyzing) [Halobacterium salinarum R1] Length = 268 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 121/254 (47%), Gaps = 20/254 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD V + ++GLSGGIDS A + VD LG + + +++P + Q++ DA Sbjct: 30 IRDTVAAAGAERCVLGLSGGIDSTTVAHLTVDELGADALHGLVMPGAVSRDQNMSDAERV 89 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG +YDV+ I V + +E + N ++R R I ++NH ++ Sbjct: 90 AEDLGIEYDVVEIDPFVTQLTDVFPDAAGDE---VAVGNARARTRAVINYFVANHGDGVV 146 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T N++E GY T YGD + NP+ +LYK QV QLA LG +P Sbjct: 147 LGTGNRAEAMTGYYTKYGDQAVDCNPIGNLYKMQVRQLA---------RDLG-----VPE 192 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN--EESFINNDQEYNDETVRYVE 519 ++ K+P+AEL QTD L Y +D ++ V+ S + + V V Sbjct: 193 DLVTKAPTAELWADQTDAGELGVDYDTIDAVLAVHVDGGLPASATATHLDIDPSVVETVR 252 Query: 520 HLLYGSEYKRRQAP 533 L S++KR P Sbjct: 253 DLYGASKHKRAMPP 266 >gi|307637024|gb|ADN79474.1| NAD synthetase [Helicobacter pylori 908] gi|325995617|gb|ADZ51022.1| NAD synthetase [Helicobacter pylori 2018] gi|325997213|gb|ADZ49421.1| NAD synthetase [Helicobacter pylori 2017] Length = 260 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + F ++ S N +R Sbjct: 61 SVSMPESKTDALDLCETFSIPYTEYSIAPYDKIFGSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSNSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL+K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILDKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|293402297|ref|ZP_06646435.1| putative NAD synthase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304404|gb|EFE45655.1| putative NAD synthase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 552 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 134/497 (26%), Positives = 215/497 (43%), Gaps = 76/497 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A+ +N G A N+ ++ + A G DLI+F + +SGY D+ + F + Sbjct: 3 MKAALVTMNVKAGQCAENVQYMKQQIKRAKEDGADLIVFPQNAVSGYLLGDVWLDEDFCR 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S D L ++ D IV G R N+ A + K ++ Sbjct: 63 YADSFNDELIRESED--IAIVWGNIRYRNRRRFNAA-------FFAYQKKTHM------R 107 Query: 125 EKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 K+ + Y D + F + I I ED+ N + Q A+ +L+A PY Sbjct: 108 VKQNELLPYMQDAVYFEENPINSAIEYKEDMVFALNFGDEI--QLADMNINLDARPY--- 162 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQQQLAFQMKHFSE 238 ++K + H H +IYVN G Q+ ++ +G S C + +Q +F E Sbjct: 163 DMQKAY--------HPHGNVIYVNACGMQNMDHSVMLMEGGS-CVLRNGKCLYQAPYFQE 213 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + + Q+ + S +A TM I Q+ +A A L I+G Sbjct: 214 DYALVDLA-SQKEDKEKPRSLLAALTMGI--QQFDAQVFAGKLPW------------IVG 258 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGG+DS++ AA+ V ALGK+ V L ++ + +A A+ALG Y I L Sbjct: 259 MSGGLDSSVTAALLVYALGKQRVYGYNLATRHNRDITKSNARQEAQALGIAYREGAIEAL 318 Query: 359 VNHFFSLMSQFLQEEPSGI------VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 V + + LQE + V EN+Q+R RG +L + + +++ +NK E++ Sbjct: 319 VE---ATETTLLQEYGYDVKQYPILVKENLQARARGYLLNSFAGMLGGVVVNNANKVEVA 375 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL------- 465 +GY TLYGD G + + DL K Q+F L+ N EV+P ++L Sbjct: 376 LGYCTLYGDSIGALSLIGDLTKVQLFALSKELNDVFA-------KEVVPHALLPDVQGNA 428 Query: 466 ---EKSPSAELRPHQTD 479 E PSAEL+ Q D Sbjct: 429 ITWEMPPSAELKEDQLD 445 >gi|240140853|ref|YP_002965333.1| NAD(+) synthase (glutamine-hydrolyzing) with a nitrilase-like domain [Methylobacterium extorquens AM1] gi|240010830|gb|ACS42056.1| NAD(+) synthase (glutamine-hydrolyzing) with a nitrilase-like domain [Methylobacterium extorquens AM1] Length = 682 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 136/552 (24%), Positives = 218/552 (39%), Gaps = 85/552 (15%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 GD A N+A +A+ G L +F EL +S Y EDL+ + + + A + + L + Sbjct: 27 GDPAANVADISGLARQAHGAGAALAVFPELCVSSYAIEDLLLQATLLDAVETGVARLVEE 86 Query: 77 THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG---- 132 + +VVG P + + + N V + G ++ V K LPNY EF+EKR F SG Sbjct: 87 SAGLTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYEKRHFASGAGIT 146 Query: 133 ------------YSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + D I D RL I +CED+W GA + + + Sbjct: 147 AETIRLGGLEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMDAVLAGATVIANPSG 206 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQQQLAFQ 232 SP + R ++T S L YV G E L +DG + + +LA + Sbjct: 207 SPITVGRADSR-ALLTRAASMRGL-CAYVYAAAGTGESTTDLSWDGQTSIDENGVRLA-E 263 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMS----DDSASTMYIP--------LQEEEAD----- 275 + F + +T D L + DD+A P L E+D Sbjct: 264 GQRFPQAPVVTLADIDLDLIAQERLQAGSFDDNARRHGTPSWRTIPFRLDPPESDLGLER 323 Query: 276 ----------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAA 310 YN V L + + +IG+SGG+DS + A Sbjct: 324 RVERFPFVPADPARLAQDCYEAYNIQVAGLAQRLAATGTKRAVIGVSGGLDSTHALIVVA 383 Query: 311 IAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A D LG ++++ LP TS ++ +A A +ALG + + I + M Sbjct: 384 KAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAARQMLADMGH 443 Query: 369 FL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGG 425 E + EN+Q+ +R + L L+N +++ T + SE+++G+ T GD Sbjct: 444 PFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWSTYGVGDQMSH 503 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILEKSPSAELRPH------QT 478 + + KT + L W I SG G ++L+ S EL P Q+ Sbjct: 504 YGVNAGVPKTLIQHLIRWV----IASGQFGEAENRTLRAVLDTEISPELVPASEGEGPQS 559 Query: 479 DQESLPPYPILD 490 + + PY + D Sbjct: 560 TEAKIGPYALQD 571 >gi|152990287|ref|YP_001356009.1| glutamine-dependent NAD+ synthetase [Nitratiruptor sp. SB155-2] gi|151422148|dbj|BAF69652.1| glutamine-dependent NAD+ synthetase [Nitratiruptor sp. SB155-2] Length = 626 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 139/577 (24%), Positives = 251/577 (43%), Gaps = 84/577 (14%) Query: 34 NRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ 93 +++ + + LF EL I+GY DL F++ Q A++ +K DG ++VG P + Sbjct: 32 SQKEVAITLFPELCITGYTMGDLFFQEIVHQKILEALEEIKKCVMDGV--VIVGAPLWYK 89 Query: 94 EGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG------------YSNDPIV-F 140 E + N V++ I+ + K L NY EF+EKR F SG + D + + Sbjct: 90 ERLYNCAVVMQNQKIVGIVPKSYLANYREFYEKRWFHSGKDIKGATLLDVPFGTDLLFRY 149 Query: 141 RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL 200 +++ G+ ICED+W + + GA +F+L+AS K R E+V Q + + Sbjct: 150 KELCFGLEICEDLWTLTPPSFTMAAAGANVIFNLSASDELVGKHAYRKELVKTQSARIVG 209 Query: 201 PIIYVNQVGGQ--DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 +Y + G+ +L + GA+ + LA + + F + +T D + + S Sbjct: 210 AYVYASSGVGESSSDLCYSGATIIAENGSILA-EGERFVFDDVVTIADIDIEKLKILRQS 268 Query: 259 DDSASTMYI---------PLQEE---EADYNACVL----SLRDYVQKNNFH--------- 293 + S + PL E + YN ++R+ V F Sbjct: 269 ETSFGDADVQNFREVALSPLPETKDVKRPYNPHPFVPPKNMREEVCHEIFSIQSSALARR 328 Query: 294 --------KVIIGLSGGIDSAL----CAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDA 339 K++IG+SGG+DS L CA + + L K ++ + +P T+ + + A Sbjct: 329 VMHIAKETKLVIGVSGGLDSTLALLVCAKVC-EILQKPYSDIVGVSMPGFGTTDATKKSA 387 Query: 340 AACAKALGCKYDVLPI-HDLVNHFFSLMSQFLQEEP--SGIVAENIQSRIRGNILMALSN 396 +A+G Y + I ++ HF + + +P + EN Q+R R ILM L+N Sbjct: 388 RKLCEAIGVTYKQIDITKSVLRHF-----EDIDHDPDICDVTYENAQARERTQILMDLAN 442 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++ T + SEI++G+ T GD +N + KT V + W T L Sbjct: 443 EVGGIVIGTGDLSEIALGFATYNGDHMAMYNVNAGVPKTLVRYVIEWVAMQQ-TDITQIL 501 Query: 457 TEVI-PPSILEKSPSAELRPHQTDQESLPPYPILDDII----------KRIVENEESFIN 505 E+I P E P+ + Q ++ + PY + D + K+IV + + Sbjct: 502 LEIINRPVSPELLPAKNGKITQKTEDIIGPYELHDFFLYHFLKYGAEPKKIVAMAK--VA 559 Query: 506 NDQEYNDETVRYVEHL----LYGSEYKRRQAPVGTKI 538 +++Y++ ++ L + +++KR P G K+ Sbjct: 560 FEEKYDECMIKKWLKLFLKRFFANQFKRNAMPDGVKV 596 >gi|218754169|ref|ZP_03532965.1| NAD synthetase [Mycobacterium tuberculosis GM 1503] gi|297635046|ref|ZP_06952826.1| NAD synthetase [Mycobacterium tuberculosis KZN 4207] gi|297732037|ref|ZP_06961155.1| NAD synthetase [Mycobacterium tuberculosis KZN R506] gi|313659373|ref|ZP_07816253.1| NAD synthetase [Mycobacterium tuberculosis KZN V2475] Length = 679 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 125/562 (22%), Positives = 226/562 (40%), Gaps = 81/562 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIVF---RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E R G + D+ G + ICED++ Sbjct: 132 ELRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 252 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 310 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 311 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 369 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 370 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 429 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G Sbjct: 430 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALG 489 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 490 WSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPEL 546 Query: 474 RPH-----QTDQESLPPYPILD 490 P Q+ + + P+ + D Sbjct: 547 IPTGEEELQSSEAKVGPFALQD 568 >gi|217033378|ref|ZP_03438809.1| hypothetical protein HP9810_9g131 [Helicobacter pylori 98-10] gi|216944319|gb|EEC23744.1| hypothetical protein HP9810_9g131 [Helicobacter pylori 98-10] Length = 260 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA K +Y + P + + F ++ S N +R Sbjct: 61 SASMPESKTDALDLCKKFSIPYTEYSIAPYDAIFSSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|254563362|ref|YP_003070457.1| NAD(+) synthase [Methylobacterium extorquens DM4] gi|254270640|emb|CAX26644.1| NAD(+) synthase (glutamine-hydrolyzing) with a nitrilase-like domain [Methylobacterium extorquens DM4] Length = 690 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 136/552 (24%), Positives = 219/552 (39%), Gaps = 85/552 (15%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 GD A N+A +A+ G L +F EL +S Y EDL+ + + + A + + L + Sbjct: 35 GDPAANVADISGLARQAHGAGAALAVFPELCVSSYAIEDLLLQATLLDAVETGVARLVEE 94 Query: 77 THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG---- 132 + +VVG P + + + N V + G ++ V K LPNY EF+EKR F SG Sbjct: 95 SAGLTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYEKRHFASGAGIT 154 Query: 133 ------------YSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + D I D RL I +CED+W GA + + + Sbjct: 155 AETIRLAGLEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMDAVLAGATVIANPSG 214 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQQQLAFQ 232 SP + R ++T S L YV G E L +DG + + +LA + Sbjct: 215 SPITVGRADSR-ALLTRAASMRGL-CAYVYAAAGTGESTTDLSWDGQTSIDENGVRLA-E 271 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMS----DDSA--------STMYIPLQEEEAD----- 275 + F + +T D L + DD+A T+ L E+D Sbjct: 272 GQRFPQAPVVTLADIDLDLIAQERLQAGSFDDNARRHGTSPWRTIPFRLDPPESDLGLER 331 Query: 276 ----------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAA 310 YN V L + + +IG+SGG+DS + A Sbjct: 332 RVERFPFVPADPARLAQDCYEGYNIQVAGLAQRLAATGTKRAVIGVSGGLDSTHALIVVA 391 Query: 311 IAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A D LG ++++ LP TS ++ +A A +ALG + + I + M Sbjct: 392 KAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAARQMLADMGH 451 Query: 369 FL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGG 425 E + EN+Q+ +R + L L+N +++ T + SE+++G+ T GD Sbjct: 452 PFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWSTYGVGDQMSH 511 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILEKSPSAELRPH------QT 478 + + KT + L W I SG G ++L+ S EL P Q+ Sbjct: 512 YGVNAGVPKTLIQHLIRWV----IASGQFGEAENRTLRAVLDTEISPELVPASEGEGPQS 567 Query: 479 DQESLPPYPILD 490 + + PY + D Sbjct: 568 TEAKIGPYALQD 579 >gi|148643231|ref|YP_001273744.1| ammonia-dependent NAD+ synthetase, NadE [Methanobrevibacter smithii ATCC 35061] gi|148552248|gb|ABQ87376.1| ammonia-dependent NAD+ synthetase, NadE [Methanobrevibacter smithii ATCC 35061] Length = 266 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 17/237 (7%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 +P + + + + ++D V + N +++GLSGGIDS L A +A +A+GKENV I++ Sbjct: 4 LPKLDTKTTKESIIKFIQDKVSEANAKGLVVGLSGGIDSTLTAYLATEAVGKENVFGIVM 63 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P T + AK L Y + I ++N F ++Q+ + E + N+++RI Sbjct: 64 PSTTTPTEDKIHGTDIAKILDIDYKEMAIDSVLNEFL-YITQY-KTENEQLAIGNLKARI 121 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +I+ +N ++ T NKSEI +GY T +GD + P+ DLYKT VF+LA + Sbjct: 122 RMSIIYYYANSKGYLVSGTGNKSEILIGYFTKHGDGACDIEPIGDLYKTDVFELAKYMG- 180 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES 502 +P I+ K P A L +QTD++ + Y LD I+ + + E S Sbjct: 181 -------------VPEEIINKPPRAGLWNNQTDEDEIGMTYENLDKILYQYNDKETS 224 >gi|307726056|ref|YP_003909269.1| NAD+ synthetase [Burkholderia sp. CCGE1003] gi|307586581|gb|ADN59978.1| NAD+ synthetase [Burkholderia sp. CCGE1003] Length = 682 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 131/546 (23%), Positives = 232/546 (42%), Gaps = 74/546 (13%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A V D N + R +EA +QG L++F EL IS Y +DL +++ + A Sbjct: 15 RVAVAVPVCRVADPQFNAQETLRLAQEAAQQGAALVVFPELGISAYSCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +AI + + + + A +V+G P + + N +++ G + V K LPNY EF+E Sbjct: 75 CKAAIADIVAASTNIPAILVIGAPLAVEHKLFNCALVISNGKLCGVVPKSYLPNYGEFYE 134 Query: 126 KRTFISG--YSNDPIVFRD------------------IRLGILICEDIWKNSNICKHLKK 165 R F + S I R + ICED+W Sbjct: 135 ARQFSAAENASTSEITLCGQQVPFSASLLFEVPQAPLFRFHVEICEDVWVPVPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V Q + +Y + G+ +L +DG + + Sbjct: 195 AGATVLVNLSASNIVIGKSGYRHQLVGQQSARCLSAYLYSSAGRGESTTDLAWDGQALIY 254 Query: 224 DGQQQLA---------------FQMKHFSEQNF------MTEWHYDQQLSQWNYMSDDSA 262 + + LA ++ S + + + Q+++++ +S + Sbjct: 255 ENGEMLAESERFLDTSHIIYGDVDLERLSRERMRQTTFGQSTRRHAQEVARFQVISVPVS 314 Query: 263 --STMYIPLQ-----------------EEEAD-YNACVLSLRDYVQKNNFHKVIIGLSGG 302 + ++PL E A+ YN V L + KV+IG+SGG Sbjct: 315 LPAAQHLPLMRAINRFPYVPSNPATRDERCAEVYNIQVQGLLQRLGAAKISKVVIGVSGG 374 Query: 303 IDSA---LCAAIAVD--ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH- 356 +DS L A A+D L + N+ +P TS ++L+ A +A+GC + + I Sbjct: 375 LDSTQALLVCAKAMDRLKLPRSNILGYTMPGFATSSRTLQQAKDLMQAVGCSMEEIDIRP 434 Query: 357 DLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + L F + E+ + EN+Q+ R + L L+N +A+++ T + SE+++G+ Sbjct: 435 SCMQMLKDLHHPFAEGEKQYDVTFENVQAGERTSHLFRLANFHQAIVIGTGDLSELALGW 494 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD ++ + KT + L W G +G + IL S EL Sbjct: 495 CTYGVGDHMSHYSVNASVPKTLITHLVRWVAESG---QVGDAGSRVLEQILATEISPELV 551 Query: 475 PHQTDQ 480 P + ++ Sbjct: 552 PGKEEK 557 >gi|154507772|ref|ZP_02043414.1| hypothetical protein ACTODO_00254 [Actinomyces odontolyticus ATCC 17982] gi|153797406|gb|EDN79826.1| hypothetical protein ACTODO_00254 [Actinomyces odontolyticus ATCC 17982] Length = 693 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 126/579 (21%), Positives = 234/579 (40%), Gaps = 96/579 (16%) Query: 29 AREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF 88 A E + +G+ + +F EL +SGY +DL + + + A+ + + D +VVG Sbjct: 36 AARELDARGVAMGVFPELCVSGYAIDDLFLQDALLDNVEKALAQIVEASADLLPLLVVGA 95 Query: 89 PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFIS----------------- 131 P + + N V + G ++A+ K +LPNY EF+EKR F++ Sbjct: 96 PLRKDNALYNCAVAIHRGRVLAIVPKSHLPNYREFYEKRHFVTMPPRACERIEVPWGGIE 155 Query: 132 GYSNDPIVFR------------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 +S P+ + +GI ICED+W L GA L +L+ASP Sbjct: 156 EFSGGPVWVPFGQVLLSADDVPGLTIGIEICEDMWVPVTPATELALAGATVLANLSASPI 215 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFS 237 + R +V + +Y G+ +L +DG + ++ +LA + F Sbjct: 216 TVGRGADRELMVRSVSARCSAAYVYTAAGMGESSTDLAWDGEAMIYEAGDRLAIG-ERFQ 274 Query: 238 EQNFMTEWHYDQQL--------------SQWNYMSDDSASTMYI---------------- 267 E +T D + +Q + D+ + + Sbjct: 275 EGAHITIADVDLERLRTERKRQNSFTDNAQRYFAGDERMAPQEVEFTLDPPRTNLGLERP 334 Query: 268 ----------PLQEEEADYNACVLSLRDYVQKNNF---HKVIIGLSGGIDSA---LCAAI 311 P + E+ Y A + + VQ+ K++IG+SGG+DS + A+ Sbjct: 335 VNRFPFVPNDPTRLEQDCYEAYNIQVAGLVQRLRAIGNPKIVIGVSGGLDSTHALVVASR 394 Query: 312 AVDALGKENVQTI--MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+D LG+ + LP TS ++ ++A + LG + + I + + Sbjct: 395 AMDLLGRPRTDILCYTLPGFATSERTKKNATLLCQYLGTSFQEIDIRPAATQMLADIGHP 454 Query: 370 LQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGF 426 E + + EN+Q+ +R + L L+NH ++L T + SE+++G+ T GD + Sbjct: 455 YGEGEATYDVTFENVQAGLRTDYLFRLANHLGGIVLGTGDLSELALGWCTYGVGDQMSHY 514 Query: 427 NPLKDLYKTQVFQLASWR------NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 + KT + L W + H L L I P ++ P ++ Q+ Q Sbjct: 515 AVNTGVPKTLMQHLIRWVVASKQFDDHVGEVLLSILHTEISPELVPAKPGEKM---QSTQ 571 Query: 481 ESLPPYPILD----DIIKRIVENEESFINNDQEYNDETV 515 + + PY + D +++R + ++ ++D +V Sbjct: 572 DKIGPYNLQDFTLYHVLRRGARPSKIAFLAEKAWSDASV 610 >gi|148823640|ref|YP_001288394.1| NAD synthetase [Mycobacterium tuberculosis F11] gi|253798482|ref|YP_003031483.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 1435] gi|289553770|ref|ZP_06442980.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 605] gi|289762607|ref|ZP_06521985.1| NAD synthetase [Mycobacterium tuberculosis GM 1503] gi|148722167|gb|ABR06792.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis F11] gi|253319985|gb|ACT24588.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 1435] gi|289438402|gb|EFD20895.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 605] gi|289710113|gb|EFD74129.1| NAD synthetase [Mycobacterium tuberculosis GM 1503] gi|328458250|gb|AEB03673.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 4207] Length = 738 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 125/562 (22%), Positives = 226/562 (40%), Gaps = 81/562 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 71 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 130 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 131 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 190 Query: 125 EKRTFISGYSNDPIVF---RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E R G + D+ G + ICED++ Sbjct: 191 ELRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 250 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 251 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 310 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 311 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 369 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 370 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 428 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 429 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 488 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G Sbjct: 489 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALG 548 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 549 WSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPEL 605 Query: 474 RPH-----QTDQESLPPYPILD 490 P Q+ + + P+ + D Sbjct: 606 IPTGEEELQSSEAKVGPFALQD 627 >gi|317012170|gb|ADU82778.1| NAD synthetase [Helicobacter pylori Lithuania75] Length = 260 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEVQKKGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P++ DA + +Y + P + + F ++ S N +R Sbjct: 61 SVSMPENKTDALILCEKFSIPYTEYSIAPYDKIFDSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA + N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELAYYLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|254551488|ref|ZP_05141935.1| NAD synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 679 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 125/562 (22%), Positives = 226/562 (40%), Gaps = 81/562 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIVF---RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E R G + D+ G + ICED++ Sbjct: 132 ELRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 252 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 310 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 311 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 369 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 370 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 429 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G Sbjct: 430 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALG 489 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 490 WSTYGVGDQMSHYNVDAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPEL 546 Query: 474 RPH-----QTDQESLPPYPILD 490 P Q+ + + P+ + D Sbjct: 547 IPTGEEELQSSEAKVGPFALQD 568 >gi|150399411|ref|YP_001323178.1| NAD+ synthetase [Methanococcus vannielii SB] gi|150012114|gb|ABR54566.1| NAD+ synthetase [Methanococcus vannielii SB] Length = 258 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 24/224 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ V+ N ++GLSGGIDS+L A + V ALGKENV +++P K ++P+ + Sbjct: 19 IREQVENANAKGAVVGLSGGIDSSLVAYLLVRALGKENVFGLIMPEKNSNPKDEKHGKLV 78 Query: 343 AKALGCKYDVLPIHDLVNHF----FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A+ LG Y + I ++ F + L +F + N++ RIR L +N Sbjct: 79 AEKLGINYSIFDITPVLVAFDAGGYVLGKEFDKRSDG-----NLKPRIRMTKLYYEANKK 133 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 ++ TSNKSEI +GYGT +GD+ F L +L+KT+V QL+++ Sbjct: 134 NYLVSGTSNKSEIYMGYGTKHGDLGCDFLTLGNLFKTEVRQLSNYLE------------- 180 Query: 459 VIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 IP I+EK+PSA L QTD+ L Y LD I+ + + +E Sbjct: 181 -IPREIIEKAPSAGLWEGQTDEGELGITYEKLDQILNLMEKGKE 223 >gi|238924754|ref|YP_002938270.1| NAD synthetase [Eubacterium rectale ATCC 33656] gi|238876429|gb|ACR76136.1| NAD synthetase [Eubacterium rectale ATCC 33656] gi|291527169|emb|CBK92755.1| NAD+ synthetase [Eubacterium rectale M104/1] Length = 650 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 144/632 (22%), Positives = 251/632 (39%), Gaps = 98/632 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + +GD N E ++ + L++F EL I+GY D+ +K + Sbjct: 7 RVAASSPEIYLGDCVNNADNIIHIAESLAKKDVQLVVFPELCITGYSCADMFLRKELLAQ 66 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEFH 124 +D +K+ D + VG P +D+ G L N + +G I+ + K +PNY EF+ Sbjct: 67 AQQELDRIKTALQDLSILVCVGLPIEDEAGRLFNCAAYVHSGEIVGIVPKTYIPNYGEFY 126 Query: 125 EKRTFISG------------YSNDP-------IVFRDIR---LGILICEDIWKNSNICKH 162 EKR F S +N P I+ +D+R +G ICED+W ++ Sbjct: 127 EKRWFTSADKRLSDEITLNYVANRPTVPFSPNIIIKDLRGAIVGTEICEDLWVSAPPSGE 186 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 L K GA + + +AS K + R +V Q +Y + G+ +L+F G Sbjct: 187 LCKAGANIIINPSASNDVIGKREYRRSLVAMQSGRCRAGYVYASSGAGESSTDLVFSGHC 246 Query: 221 FCFDGQQ------QLAFQM-KHFSEQNFM------TEWHYDQQLS-QWNYMSD---DSAS 263 D + + +M K SE + M +E D+ ++ + Y SD D Sbjct: 247 IIADNGRIAGETSDYSKRMNKKVSEDDVMSSGFVISEIDIDRCMNDRHRYNSDSWADVPD 306 Query: 264 TMYIPLQEEE--ADY---------------------NAC--VLSLR-----DYVQKNNFH 293 + + L E DY N C +LSL+ + Sbjct: 307 VIKVILNGENRMKDYQIWPKKVNPYPFVPSDKNNRKNRCMEILSLQAKGLEQRLISTGIK 366 Query: 294 KVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 V++G+SGG+DS L + DA + K N+ I +P T+ + A + G Sbjct: 367 NVVLGISGGLDSTLALLVCCDAFEALGIPKRNIYGITMPGFGTTSTTKTIADRLMEEFGV 426 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I + ++ + ENIQ+R R +L +N +++ T + Sbjct: 427 TAVEVNIEAACRQHMKDIGH--PDDVFDVTYENIQARERTQVLFDYANMVDGLVIGTGDM 484 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQV-FQLASWRNSHGITSGL-GPLTEV----IPP 462 SE+++G+ T GD + + KT V + + ++ + T + L E+ I P Sbjct: 485 SELALGWCTYNGDHMSNYAVNCSVPKTLVKYIVQAYASECASTDEMKNVLCEIADLPISP 544 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES-----------FINNDQEYN 511 +L P + Q +ES+ Y + D + + N ES F N + Sbjct: 545 ELL--PPDKDGNIAQKTEESIGKYDLHDFFLYHFLRNGESRDRILKLAEIAFANVSKGEI 602 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 ++T+ ++KR P G K+ S Sbjct: 603 EKTLETFFTRFRQQQFKRSCIPDGPKVGTVSL 634 >gi|222445462|ref|ZP_03607977.1| hypothetical protein METSMIALI_01101 [Methanobrevibacter smithii DSM 2375] gi|261349976|ref|ZP_05975393.1| NAD+ synthetase [Methanobrevibacter smithii DSM 2374] gi|222435027|gb|EEE42192.1| hypothetical protein METSMIALI_01101 [Methanobrevibacter smithii DSM 2375] gi|288860759|gb|EFC93057.1| NAD+ synthetase [Methanobrevibacter smithii DSM 2374] Length = 266 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 17/237 (7%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 +P + + + + ++D V + N +++GLSGGIDS L A +A +A+GKENV I++ Sbjct: 4 LPKLDTKTTKESIIKFIQDKVSEANAKGLVVGLSGGIDSTLTAYLATEAVGKENVFGIVM 63 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P T + AK L Y + I ++N F ++Q+ + E + N+++RI Sbjct: 64 PSTTTPTEDKIHGTDIAKILDIDYKEMAIDSVLNEFL-YVTQY-KTENEQLAIGNLKARI 121 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +I+ +N ++ T NKSEI +GY T +GD + P+ DLYKT VF+LA + Sbjct: 122 RMSIIYYYANSKGYLVSGTGNKSEILIGYFTKHGDGACDIEPIGDLYKTDVFELAKYMG- 180 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES 502 +P I+ K P A L +QTD++ + Y LD I+ + + E S Sbjct: 181 -------------VPEEIINKPPRAGLWNNQTDEDEIGMTYENLDKILYQYNDKETS 224 >gi|145591249|ref|YP_001153251.1| NAD+ synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145283017|gb|ABP50599.1| NH(3)-dependent NAD(+) synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 281 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 93/156 (59%), Gaps = 2/156 (1%) Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y+QK ++GLSGG+DS A+ +ALG E V ++LP K T PQ +EDA A+ Sbjct: 27 YIQKAKVRGAVVGLSGGVDSCTTLALTAEALGPERVIALILPSKATPPQDVEDAIRVARQ 86 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 G +Y+V+ I ++N + + MS++ ++ + N+ +RIR ++L +N +++ T Sbjct: 87 FGVRYEVIDITPILNAYKTTMSEY--DDKDLVARGNLTARIRMSVLYYYANKRNMLVIGT 144 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +KSE+ +GY T +GD P+ DLYK+QV LA Sbjct: 145 GDKSELMLGYFTKHGDGGVDILPIGDLYKSQVRALA 180 >gi|134045274|ref|YP_001096760.1| NH(3)-dependent NAD(+) synthetase [Methanococcus maripaludis C5] gi|132662899|gb|ABO34545.1| NH(3)-dependent NAD(+) synthetase [Methanococcus maripaludis C5] Length = 258 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 123/221 (55%), Gaps = 18/221 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ V+ + V++GLSGGIDSAL A ++V ALGKENV +++P K ++P + Sbjct: 19 IREQVENADAKGVVVGLSGGIDSALVAYLSVKALGKENVFGVIMPEKNSNPDDEKYGKLV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A+ LG Y V I ++ F + +++ +E V N++ RIR + +N + Sbjct: 79 AETLGINYTVFDITPVLVAFGA--GGYVEGKEFDRRVDANLKPRIRMTEVYYHANKKNYL 136 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 + TSNKSEI +GYGT YGD+ F + +L+KT+V QLA +G L E+I Sbjct: 137 VAGTSNKSEIYMGYGTKYGDLGSDFLTIGNLFKTEVRQLAGH---------VGVLKEII- 186 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 +K+PSA L QTD++ L Y LD ++ + + +E Sbjct: 187 ----DKAPSAGLWDGQTDEDELGISYETLDKLLDLMEKGKE 223 >gi|187735126|ref|YP_001877238.1| NAD+ synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187425178|gb|ACD04457.1| NAD+ synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 644 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 116/486 (23%), Positives = 201/486 (41%), Gaps = 75/486 (15%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L A+ QL V ++ N+ + +A Q ++F EL I+GY DL F+ + Sbjct: 6 RLASAVPQLR--VAEVDYNVDQLTEGFRKAAEQQAAAVVFPELCITGYSCGDLFFQPNLR 63 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +A + + T G VVG P ++ + N+ ++ +G I+A+ K LPNY EF Sbjct: 64 KAALNGLLRFTEATEGSGTIAVVGLPFLHEDALYNTAAVVQSGRILALVPKTVLPNYREF 123 Query: 124 HEKRTFISGYS-----------------NDPIVFRD----IRLGILICEDIWKNSNICKH 162 +EKR F SG IVF + G+ ICED+W Sbjct: 124 YEKRQFTSGRELGTGVKEVTVNGVHIPFGTEIVFHEESSPFSFGVEICEDLWSVIPPSSK 183 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDG 218 L GA + + +A K R E+V Q YV G E +F G Sbjct: 184 LALLGARAILNPSAGTELTGKAAYRRELVRQQSGRCL--CAYVLSSAGVHESTTDTVFGG 241 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS----------ASTMYIP 268 S D + A + + F ++ + D + + +S+ S + +++ Sbjct: 242 HSLIADNGRPAA-EGERFCRESTLIFADVDFERLEAARLSESSFNDSKSLFPAGNALHLA 300 Query: 269 LQEE-------EADYNACV---------------------LSLRDYVQKNNFHKVIIGLS 300 L E+ E +N + L ++ +++IG+S Sbjct: 301 LPEQVPGAPGLEYAFNPALPFLPSPSRRRERCEEIISIQTAGLAKRMEHTRAQRLVIGIS 360 Query: 301 GGIDSALCAAI---AVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L I A AL + ++ + +P T+ ++ ++A + LG + +PI Sbjct: 361 GGLDSTLALLICSRACRALKRPASDILAVTMPGFGTTDRTHDNAVTMCRLLGVELREIPI 420 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + F+ + E + EN+Q+R R ILM L+N + +++ T + SEI++G+ Sbjct: 421 SECCLRHFADIGHDPAERTT--TYENVQARERTQILMDLANKTGGLVVGTGDLSEIALGW 478 Query: 416 GTLYGD 421 T GD Sbjct: 479 STYNGD 484 >gi|288871329|ref|ZP_06117233.2| glutamine-dependent NAD+ synthetase [Clostridium hathewayi DSM 13479] gi|288863862|gb|EFC96160.1| glutamine-dependent NAD+ synthetase [Clostridium hathewayi DSM 13479] Length = 646 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 126/579 (21%), Positives = 236/579 (40%), Gaps = 92/579 (15%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 L++F EL ++ Y DL + + + + + +T +G P + + N+ Sbjct: 50 LMVFPELSLTAYTCGDLFGQDALLYGARRELKEILKETEGSDLLAFIGMPWERSGKLYNT 109 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVF----RDIRLG--IL----- 148 V + G I+ + K N+PNYSEF+E+R F G + P++ ++ +G IL Sbjct: 110 AVAVQNGRILGIVPKSNIPNYSEFYERRYFEPG-NEIPVMVSWEGQNFPMGTNILFACEE 168 Query: 149 ---------ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVH 199 ICED W GA + + +AS K R ++TG + + Sbjct: 169 MPGFVVAAEICEDAWVPCPPSIRHTAAGATVIVNCSASDETTGKDIYRRSLITGHSASLV 228 Query: 200 LPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD------QQL 251 +Y N G+ +L+F G + + LA + K F+ + + + ++L Sbjct: 229 CGYVYANAGDGESTQDLVFGGQNLITENGTCLA-ESKRFANETIFADMDMERLNNERRRL 287 Query: 252 SQWNYMSDDSASTMYIPLQEEEADYNACV-------------------------LSLRDY 286 S + ++ S T+ + EEE D + + L+ Sbjct: 288 STYPVLNTGSYVTVGFHITEEEYDLERPIDPMPFVPTDEGQRNRRCEEILSIQAMGLKKR 347 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAA 341 + +IG+SGG+DS L + V A + + + + +P T+ ++ ++A Sbjct: 348 LAHTGCSHAVIGISGGLDSTLALLVTVRAFDMLNIPRHQIHAVTMPCFGTTDRTYQNACL 407 Query: 342 CAKALGCKYDVLPIHDLVN-HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 K +G + + I + V HF + + + EN Q+R R +LM L+N Sbjct: 408 MTKKVGAELTEIDIREAVTVHFRDIGHDISHHD---VTYENSQARERTQVLMDLANRWGG 464 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 M++ T + SE+++G+ T GD + + KT V L + + T G L V+ Sbjct: 465 MVVGTGDMSELALGWATYNGDHMSMYGVNASVPKTLVRHLVRY---YADTCGEEELKAVL 521 Query: 461 PPSILEKSPSAELRP------HQTDQESLPPYPILDDIIKRIVE-----------NEESF 503 +L+ S EL P Q ++ + PY + D + +++ + +F Sbjct: 522 -LDVLDTPVSPELLPPKEGEIAQKTEDLVGPYELHDFFLYQVLRYGYRPAKVFRLAKAAF 580 Query: 504 INNDQEYNDETV----RYVEHLLYGSEYKRRQAPVGTKI 538 D +Y+ ETV + + ++KR P G K+ Sbjct: 581 ---DGQYDGETVLKWLKVFYRRFFSQQFKRSCLPDGPKV 616 >gi|295104732|emb|CBL02276.1| NAD+ synthetase [Faecalibacterium prausnitzii SL3/3] Length = 642 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 132/598 (22%), Positives = 237/598 (39%), Gaps = 81/598 (13%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V D N + + A ++G+ L +F E ++GY DL +++ Q A++ L + Sbjct: 17 VADCTYNAQQVLAQLQAAAQRGVKLAVFPEFCLTGYTCGDLFLQRTLQQGALDALEWLLA 76 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS- 134 + +VG P + N +L G ++ V K LPNY EF+EKR F G + Sbjct: 77 QSRTLDTVALVGLPLLVHGKLYNCAAVLCRGQLLGVVPKTYLPNYGEFYEKRQFTPGSTE 136 Query: 135 -------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 ++FR LG+ +CED+W GA + +L+A Sbjct: 137 VQTVTVCGQQVPFGTSLLFRCRQMPSFVLGVELCEDLWSALPPSTFHALAGATVIANLSA 196 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG--------------AS 220 S K + R +V Q + + +Y + G+ +++F G A Sbjct: 197 SDETVGKAEYRRALVANQSARLLCGYLYASAGHGESTTDMVFAGHDLIAEDGSILAETAP 256 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSDDSASTMYI---PLQEEEA 274 F D + + +E+ T + + + +++ +++ T I P + Sbjct: 257 FAGDHAETELDCQRMEAERARNTSFEHTAEGYITVEFDLTPEETVLTRRIDPAPFVPGDP 316 Query: 275 DYNACVLSLRDYVQKNNFHK---------VIIGLSGGIDSALCAAIAVDALGK-----EN 320 A L +Q + K +IG+SGG+DS L +AV A+ + + Sbjct: 317 QRRAARCELILKMQADGLAKRLEHAHAKTAVIGISGGLDSCLALLVAVRAMKQLHRSAAD 376 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 V + +P T+ ++ +A LG + + I D V F+ + Q E + E Sbjct: 377 VLAVTMPCFGTTKRTRSNAEILCGELGVSFQEIRIADTVRSHFADIGQ--DETVLDVTFE 434 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N Q+R+R LM L+N + +++ T + SE+++G+ T GD + + KT V L Sbjct: 435 NGQARVRTLELMDLANRTGGLVVGTGDLSELALGWATYNGDHMSMYGVNAGVPKTLVRYL 494 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLPPYPILDDII- 493 + T+ L + IL+ S EL P Q ++ + PY + D + Sbjct: 495 VQYEAETAATAAL----HDVLLDILDTPVSPELLPAKDGEIAQITEDLVGPYELHDFYLY 550 Query: 494 ---------KRIVENEESFINNDQEYNDET----VRYVEHLLYGSEYKRRQAPVGTKI 538 +I ++ EY D +R + ++KR P G K+ Sbjct: 551 YVLRCGFGPAKIYRLAKAAFAGRAEYTDAVLYKWLRNFYWRFFAQQFKRSCLPDGPKV 608 >gi|207092246|ref|ZP_03240033.1| NH(3)-dependent NAD+ synthetase (nadE) [Helicobacter pylori HPKX_438_AG0C1] Length = 260 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY ++ L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIVYLCDFLEKEVQKKGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 SVSMPESKTDALNLCETFSIPYTEYSIAPYDAIFSSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S + ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKTDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|188583705|ref|YP_001927150.1| NAD synthetase [Methylobacterium populi BJ001] gi|179347203|gb|ACB82615.1| NAD+ synthetase [Methylobacterium populi BJ001] Length = 690 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 130/560 (23%), Positives = 219/560 (39%), Gaps = 101/560 (18%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 GD A N+A +A+ G L ++ EL +S Y EDL+ + + + A + + L ++ Sbjct: 35 GDPAANVADILGLARQAHGAGAALAVYPELCVSSYAIEDLLLQATLLDAVEAGVARLVAE 94 Query: 77 THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG---- 132 + +VVG P + + + N V + G ++ V K LPNY EF+EKR F SG Sbjct: 95 SAGLTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYEKRHFASGAGIL 154 Query: 133 ------------YSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + D I D RL I +CED+W GA + + + Sbjct: 155 GETIRLGGAEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMEAVLAGATVIANPSG 214 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SP + R ++T S L YV G E D +DGQ + K Sbjct: 215 SPITVGRADSR-ALLTRAASMRGL-CAYVYAAAGTGESTTD---LSWDGQTSIDEVGKRL 269 Query: 237 SE-----------------------------------QNFMTEWH--------------Y 247 +E + + W Sbjct: 270 AEGERFPAGPVVTLADIDLDLIVQERLQAGSLDDNARHHGLRPWRTVSFRLDPPQGDLGL 329 Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA- 306 ++++ ++ ++ D AS Q+ YN V L + + +IG+SGG+DS Sbjct: 330 ERRVERFPFVPSDPASLA----QDCYEAYNIQVAGLAQRLAATGTKRAVIGVSGGLDSTH 385 Query: 307 --LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + A A D LG ++++ LP TS ++ +A A +ALG + + I Sbjct: 386 ALIVVAKAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAARQM 445 Query: 363 FSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-Y 419 + M E + EN+Q+ +R + L L+N +++ T + SE+++G+ T Sbjct: 446 LADMGHPFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWSTYGV 505 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHG---------ITSGLGPLTEVIPPSILEKSPS 470 GD + + KT + L W + G + + L TE+ P E P+ Sbjct: 506 GDQMSHYGVNAGVPKTLIQHLIRWVIASGQFGEEENRTLRAVLD--TEISP----ELVPA 559 Query: 471 AELRPHQTDQESLPPYPILD 490 AE Q+ + + PY + D Sbjct: 560 AEGEGPQSTEGKIGPYALQD 579 >gi|309812477|ref|ZP_07706230.1| NAD+ synthase [Dermacoccus sp. Ellin185] gi|308433532|gb|EFP57411.1| NAD+ synthase [Dermacoccus sp. Ellin185] Length = 680 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 131/569 (23%), Positives = 228/569 (40%), Gaps = 102/569 (17%) Query: 10 AQLNPV-VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSS 68 A +PV + D N A+ E + +G+ +F EL ++GY +DLVF+ + + Sbjct: 16 AVTHPVALADPTTNAARVLEVARELHDRGVAAAVFPELDLTGYSIDDLVFQDVLLDDVLA 75 Query: 69 AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRT 128 AI T+ + + VG P + + N V++ G ++ V K +LP Y EF+EKR Sbjct: 76 AIKTIVDGSEGLTPVLAVGAPLRKGTRLFNCAVVIKDGEVLGVVPKSHLPTYKEFYEKRW 135 Query: 129 FISG-----------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLKKQ 166 + G + D ++FR D+ + + +CED+W Sbjct: 136 YAPGLDQRGQYIDLGDLGEVPFGPD-LIFRAVDLPDLAIHVEVCEDVWVPIPPSSEAAAA 194 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +L+ SP K +R +V Q +Y G+ +L +DG + +D Sbjct: 195 GASVLMNLSGSPITIGKSSQRSLVVQSQSFRTLAAYVYAASGEGESTTDLAWDGQTMIYD 254 Query: 225 GQQQLAFQMKHFS---------------EQNFMTEWHYD--------------------- 248 Q L + + F Q M YD Sbjct: 255 -QGTLLAESERFPSGPRTSIADVDLGAIRQARMRFNSYDDNRPGIGPARPLREVPFELGA 313 Query: 249 --------QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++ ++ ++ D A Q+ Y V L ++ K++IG+S Sbjct: 314 PDGDRGLLREIERFPFVPADDAQLA----QDCYEAYEIQVSGLEQRMRSIGAPKIVIGVS 369 Query: 301 GGIDSA---LCAAIAVDALGKENVQTI--MLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS + AA A+D +G+ + +P TS + +A A+ALG ++ + I Sbjct: 370 GGLDSTHALIVAARAMDRVGRPRTDILAYTMPGFATSDHTKSNAYKLAEALGVTFEEVDI 429 Query: 356 HDLVNHFFSLMSQFLQEEPSG-------IVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + M P+G + EN+Q+ +R + L ++N ++L T + Sbjct: 430 RPMATQMLKDMGH-----PAGSGEPVYDVTFENVQAGLRTDFLFRIANQKSGIVLGTGDL 484 Query: 409 SEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG------LGPLTEVIP 461 SE+++G+ T GD + + KT + L W S S L L I Sbjct: 485 SELALGWCTYGVGDQMSHYGVNAGVPKTLMQHLIRWVASGDEFSAEVGETLLSILDTEIS 544 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILD 490 P ++ P+ E Q+ Q+S+ PY + D Sbjct: 545 PELV---PTKEGEKPQSTQDSIGPYNLQD 570 >gi|298736726|ref|YP_003729256.1| NH(3)-dependent NAD(+) synthetase [Helicobacter pylori B8] gi|298355920|emb|CBI66792.1| NH(3)-dependent NAD(+) synthetase [Helicobacter pylori B8] Length = 260 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 117/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEVQKKGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + F ++ S N +R Sbjct: 61 SVSMPESKTDALNLCETFSIPYTEYSIAPYDKIFGSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEQDLGYPYSMIDPLLKDI 210 >gi|46199840|ref|YP_005507.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB27] gi|55981869|ref|YP_145166.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB8] gi|46197467|gb|AAS81880.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB27] gi|55773282|dbj|BAD71723.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB8] Length = 281 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 33/279 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ + + K I+ +SGG+DSA A+AV ALG E V + LP++ +SP S E A Sbjct: 28 IREELSWRGYEKAIVAVSGGVDSATTLALAVRALGAERVHALFLPHRESSPTSREHAYLV 87 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ G + + I +V + +L N+ +R R +L S +A+ Sbjct: 88 AETFGVALEEVDITPMVEGYAALTPDLTPHRKG-----NVMARARMIVLFDKSEAYRALP 142 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T NK+E GY T +GD + NPL DLYKTQV++LA LG +P Sbjct: 143 LGTGNKTERLFGYFTWHGDDTPPVNPLGDLYKTQVWRLA---------EHLG-----VPE 188 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN--NDQ-----EYNDETV 515 ++ K P+A+L P QTD+ L + D+I E ++ +DQ + +E + Sbjct: 189 EVVRKPPTADLIPGQTDEADLGLRYLRADVIL------EHYLKGYSDQYILGLGFTEEEL 242 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 R V+ + + +K R P +++ + G L P+ + Sbjct: 243 RRVKERVNRTHWK-RALPTVALLSSTAIGEFYLRPLDYR 280 >gi|159905707|ref|YP_001549369.1| NAD+ synthetase [Methanococcus maripaludis C6] gi|159887200|gb|ABX02137.1| NAD+ synthetase [Methanococcus maripaludis C6] Length = 258 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 79/234 (33%), Positives = 126/234 (53%), Gaps = 19/234 (8%) Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 Q EE N C + + V+ + V++GLSGGIDSAL A ++V A+GK+NV +++P K Sbjct: 7 QLEELANNICDF-ICEQVENADAKGVVVGLSGGIDSALVAYLSVRAIGKDNVFGVIMPEK 65 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRG 388 ++P + A+ LG Y V I ++ F + +++ +E V N++ RIR Sbjct: 66 NSNPDDEKYGKLVAETLGIDYTVFDITPVLVAFGA--GGYVEGKEFDRRVDANLKPRIRM 123 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +N ++ TSNKSEI +GYGT YGD+ F + +L+KT+V QLAS+ Sbjct: 124 TEVYYHANKKNYLVAGTSNKSEIYMGYGTKYGDLGSDFLTIGNLFKTEVRQLASYVG--- 180 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 +P I++K+PSA L QTD+ L Y LD ++ + + +E Sbjct: 181 -----------VPKEIIDKAPSAGLWDGQTDEGELGISYETLDKLLNLMEKGKE 223 >gi|218296057|ref|ZP_03496826.1| NAD+ synthetase [Thermus aquaticus Y51MC23] gi|218243434|gb|EED09963.1| NAD+ synthetase [Thermus aquaticus Y51MC23] Length = 281 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 136/273 (49%), Gaps = 21/273 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ + + K I+ +SGG+DSA A+AV ALG++ V + LP++ +SP S E A Sbjct: 28 IREELAWRGYEKAIVAVSGGVDSATTLALAVRALGQDRVHALFLPHRDSSPLSREHAYLV 87 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ G + + I +V + +L N+ +R R +L S +A+ Sbjct: 88 AETFGVALEEVDITPMVEAYAALTPDLTPHRKG-----NVMARTRMVVLFDKSQAYQALP 142 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T NK+E GY T +GD + NPL DLYKTQV++LA + LG +P Sbjct: 143 LGTGNKTERLFGYYTWHGDDTPPVNPLGDLYKTQVWRLAEY---------LG-----VPE 188 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 ++++K P+A+L P QTD+ L Y D I++ ++ + +E +R V+ Sbjct: 189 AVVKKPPTADLIPGQTDEADLGVRYLRADVILEHYLKGYPDGYLLGLGFTEEEIRRVKEG 248 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 + + +K R P +++ + G L P+ + Sbjct: 249 VNRTHWK-RALPTVALLSSTAIGEFYLRPLDYR 280 >gi|219849407|ref|YP_002463840.1| NAD synthetase [Chloroflexus aggregans DSM 9485] gi|219543666|gb|ACL25404.1| NAD+ synthetase [Chloroflexus aggregans DSM 9485] Length = 691 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 134/543 (24%), Positives = 226/543 (41%), Gaps = 101/543 (18%) Query: 36 QGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG 95 +G ++LF EL +S Y +DL + + + A A+ L + THD A ++VG P + + Sbjct: 47 EGAVVVLFPELGLSAYSNDDLFQQTTLLDAVEQALIDLAAATHDLNALLLVGAPLRHEGR 106 Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS--NDPIVFRDIR--------- 144 + N V L +G I+ V K LPNY EF+EKR F + D I R Sbjct: 107 LFNCAVALCSGQIVGVTPKSYLPNYREFYEKRHFAAARDAIGDTISVAGQRAPFGTNILY 166 Query: 145 ---------LGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQI 195 + + +CED+W GA L +L+AS K R + Q Sbjct: 167 EAEAIPGLAVYVELCEDLWTPLPPSTFAALAGATVLCNLSASNITIGKADYRRALCLSQS 226 Query: 196 SHVHLPIIYVNQVGGQD----------------ELIFDGASFCFDGQ------------- 226 + +Y G+ EL+ + FC D Q Sbjct: 227 ARTIAAYLYSAAGLGESTTDLAWDGHALICENGELLAESRRFCDDEQIIFADVDLERLIQ 286 Query: 227 ---QQLAFQ------------MKHFS---EQNFMTEWHYDQQLSQWNYMSDDSASTMYIP 268 +Q +F M+ + + F+T+ + ++++ Y+ DD P Sbjct: 287 DRMRQTSFSDSIGDYRERLRAMRRITLPIKPPFVTDLR--RTVARFPYVPDD-------P 337 Query: 269 LQEEEADYNACVLSLRDYVQK---NNFHKVIIGLSGGIDS--ALCAAI-AVDALG--KEN 320 +E Y A + + +Q+ KV+IG+SGG+DS AL A+ A+D LG ++N Sbjct: 338 ATRDERCYEAYNIQVHGLIQRMRSAGVTKVVIGVSGGLDSTQALIVAVRAMDRLGLSRQN 397 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCK-YDVLPIHDLVNHFFSLMSQFLQEEPSG--- 376 V +P TS Q+ +A A ALG Y++ D+ ++ G Sbjct: 398 VLAYTMPGFATSAQTHRNAQALMAALGVSAYEI----DIRPSALQMLRDLGHPAGEGKPV 453 Query: 377 --IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLY 433 + EN+Q+ R + L L+N+ A+++ T + SE+++G+ T GD +N + Sbjct: 454 YDVTFENVQAGERTSHLFRLANYHNAIVVGTGDLSELALGWCTYGVGDQMSHYNVNASVP 513 Query: 434 KTQVFQLASWRNSHGITSGL--GPLTEV----IPPSILEKSPSAELRPHQTDQESLPPYP 487 KT + L + G G L E+ I P ++ + + + +P Q +E + PY Sbjct: 514 KTLIQHLIRYVIRSGEFGGEVNKVLEEILATEISPELVPAADNNDDKPAQRTEEIIGPYD 573 Query: 488 ILD 490 + D Sbjct: 574 LQD 576 >gi|291515933|emb|CBK65143.1| NH(3)-dependent NAD(+) synthetase [Alistipes shahii WAL 8301] Length = 641 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 139/616 (22%), Positives = 251/616 (40%), Gaps = 92/616 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+A A + V D N + EEA R+G++++ F EL ++ Y DL+ +++ + Sbjct: 7 LKVAAAVPHVRVADCDYNTERMAAMAEEAARRGVEIVAFPELGVTAYTCGDLLLQQTLLD 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A++ L T ++ G P + + N V+ G ++ V K +P+Y EF+ Sbjct: 67 AADEALERLVRATRKLPLTLIAGAPLRHGSTLYNCAVVFTQGKVLGVVPKTYIPDYGEFY 126 Query: 125 EKRTFIS--GYSNDPIV---------------FRDIRLGILICEDIWKNSNICKHLKKQG 167 E R F S G S++ I GI ICED+W + L G Sbjct: 127 ENRWFASGAGISDEHIAVAGQQADFGADLTFEVNGAEFGIEICEDLWTAAPPSSQLALNG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG------- 218 A+ +F+L+ASP K ++V Q +Y + G+ +L+F G Sbjct: 187 AKVIFNLSASPESVGKHAYLRQLVAQQSGRAIAAYVYCSAGFGESTTDLVFAGNAVIAEN 246 Query: 219 -------ASFC----------------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN 255 A F F+ ++ +F+ + +N + E + L + Sbjct: 247 GCILREAARFSPDEQLVVADVDIERLEFERRRNTSFRANEGATENTVIEMKIPEGL-RGV 305 Query: 256 YMSDDSASTMYIPLQEEEAD--------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + D ++P ++EAD + L + K ++G+SGG+DS L Sbjct: 306 ALDRDIDPMPFVP--KDEADRSERCEEIFRIQSHGLAQRMVHTRSEKAVVGISGGLDSTL 363 Query: 308 CAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + L + + I +P T+ ++ +A + LG +PI D Sbjct: 364 ALLVTARTFDFLHLDRAGIIGITMPGFGTTDRTYNNALELMRGLGVTIREIPIRDACTQH 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + L G EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 424 FQDIG--LDPGCRGAAYENAQARERTQILMDVANMEGGLVIGTGDLSELALGWATYNGDQ 481 Query: 423 SGGFNPLKDLYKTQVFQLASW-----RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 + + KT V L W +++ + L + + P +L AE R Q Sbjct: 482 MSMYGVNASVPKTLVRHLVKWAAATEQDAATRATLLDIIDTPVSPELLPA--DAEGRIAQ 539 Query: 478 TDQESLPPYPILDDII-----------KRIVENEESFINNDQEYNDETV-RYVEHLL--- 522 ++ + PY + D + K ++ E++F D Y+ + R++ + Sbjct: 540 KTEDLVGPYELHDFFLYNFLRAGYGPAKILLLAEQAF---DGSYDRAAILRWLTVFVRRF 596 Query: 523 YGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 597 FTQQFKRSAMPDGPKV 612 >gi|254173447|ref|ZP_04880120.1| NAD+ synthetase [Thermococcus sp. AM4] gi|214032856|gb|EEB73685.1| NAD+ synthetase [Thermococcus sp. AM4] Length = 254 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 84/235 (35%), Positives = 126/235 (53%), Gaps = 24/235 (10%) Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSA A +A ALGKE V +++PY Q +EDA +LG + + I +V+ F Sbjct: 38 DSATTAYLAARALGKEKVLGLIMPY--YKNQDVEDARLVCSSLGIECREINIKPIVDSFV 95 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S + +P NI +R R IL A +N ++L TSN+SE GY T +GD + Sbjct: 96 SQLGF----QPDKRSLGNIMARTRMIILYAHANAKNYLVLGTSNRSEFLTGYFTKWGDGA 151 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + PL +LYKT+V+++A +G +P I+EK P+A L QTD++ L Sbjct: 152 SDYAPLINLYKTEVWEIAKL---------IG-----VPERIIEKKPTAGLWEGQTDEDEL 197 Query: 484 P-PYPILDDIIKRIVE--NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Y +LD+I+ R+V+ E+ I + E V YVE+L+ SE+KRR P+G Sbjct: 198 GISYRLLDEILWRLVDLKMEKGKIAEELGVPVERVEYVENLVRRSEHKRR-LPLG 251 >gi|319902670|ref|YP_004162398.1| NH(3)-dependent NAD(+) synthetase [Bacteroides helcogenes P 36-108] gi|319417701|gb|ADV44812.1| NH(3)-dependent NAD(+) synthetase [Bacteroides helcogenes P 36-108] Length = 641 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 124/554 (22%), Positives = 229/554 (41%), Gaps = 75/554 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+++ + A+ +G+ +++F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKYNVSEIEKEIIIADGKGVQIMVFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIQVLNNTRQMDIISILGMPVALNGVLLNAAVVIQRGKVLGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S ++F D GI ICED+W L QG Sbjct: 126 EKRWFTSACEVPDNSVRLCGQIVPMGRNLLFETADTTFGIEICEDLWATIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKHNYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMSDDSA-------------STMYI---- 267 +A + F EQ ++E + + + +A ST Y+ Sbjct: 246 GMLIAASERFSFEEQVVISEIDVEHLRMERRVNTTFAACRANCASEFPVRISTEYVNSKD 305 Query: 268 -----------------PLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC- 308 L E E ++ V L + ++G+SGG+DS L Sbjct: 306 LNLTRTLDPHPFVPSGAALNERCEEIFSIQVSGLAQRLVHTKAKSAVVGISGGLDSTLAL 365 Query: 309 --AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 A D LG ++++ + +P T+ ++ +A +LG + I + V HF Sbjct: 366 LVCARTFDKLGWFRKDIIGVTMPGFGTTGRTHANAVNLMNSLGVTVREISIKEACVQHFK 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + +V EN Q+R R +LM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DINHDINVHD---VVYENSQARERTQVLMDIANQTWGMVVGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------H 476 + + KT V L W +G+ + + I++ S EL P Sbjct: 483 SMYGVNGSIPKTLVKHLVKWVAENGVDES----SRITLLDIVDTPISPELIPADDNGNIQ 538 Query: 477 QTDQESLPPYPILD 490 Q ++ + PY + D Sbjct: 539 QITEDLVGPYELHD 552 >gi|257438417|ref|ZP_05614172.1| putative NH(3)-dependent NAD(+) synthetase [Faecalibacterium prausnitzii A2-165] gi|257198996|gb|EEU97280.1| putative NH(3)-dependent NAD(+) synthetase [Faecalibacterium prausnitzii A2-165] Length = 644 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 139/608 (22%), Positives = 242/608 (39%), Gaps = 86/608 (14%) Query: 10 AQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 A L+P V D A N + A +G+ L +F E ++GY DL +++ Q Sbjct: 9 AALSPALRVADCAYNTRQILTELRAAAARGVKLAVFPEFCLTGYTCGDLFLQRTLQQGAL 68 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 + + L + + +++G P + + N + G ++ + K LPNY EF+EKR Sbjct: 69 TGLQELLDASRELDTVVLMGLPLMVRGKLYNCAAVFCRGQLLGLVPKTYLPNYGEFYEKR 128 Query: 128 TFISGYS--------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLKKQGA 168 F G + ++FR LG+ +CED+W GA Sbjct: 129 QFTPGSTEVEWVNVCGQDVPFGTSLLFRCRQMPSFVLGVELCEDLWSALPPSTFHALAGA 188 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQ 226 + +L+AS K + R +V Q + + +Y + G+ +++F G + Sbjct: 189 TVIANLSASDETVGKAEYRRALVENQSARLLCGYLYASAGHGESTQDMVFAGHDLIAENG 248 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQ------------------QLSQWNYMSDDSASTMYI- 267 LA ++K F+ TE + Q +++ D+ T ++ Sbjct: 249 TLLA-EVKPFAGGPAETELDCQRMESERARNTSFEPSTEGYQTVEFDLALTDTVLTRWVD 307 Query: 268 --PL--QEEEADYNACVLSLR---DYVQKNNFH----KVIIGLSGGIDSALCAAIAVDA- 315 P E+ C L L+ D + K H +IG+SGG+DS L +AV A Sbjct: 308 PTPFIPHNEQLRAERCELILKMQADGLAKRLEHARAKTAVIGISGGLDSCLALLVAVRAM 367 Query: 316 --LGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 LG+ +V + +P T+ ++ +A L + + I V+ F + Q Sbjct: 368 KQLGRPTTDVLAVTMPCFGTTKRTRSNAEILCDELHVSFTEIDIAATVHSHFRDIGQ--D 425 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 E + EN Q+R+R LM +N + +++ T + SE+++G+ T GD + Sbjct: 426 ESVLDVTYENGQARVRTLELMDTANRTGGLVVGTGDLSELALGWATYNGDHMSMYGVNAG 485 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQESLP 484 + KT V L + T L EV+ IL+ S EL P Q ++ + Sbjct: 486 VPKTLVRHLVRYEADIAATPA---LKEVL-LDILDTPVSPELLPAKDNGEIAQRTEDLVG 541 Query: 485 PYPILDDII----------KRIVENEESFINNDQEYNDET----VRYVEHLLYGSEYKRR 530 PY + D + +I + +EY D +R + ++KR Sbjct: 542 PYELHDFYLYYVLRFGFGPAKIFRLARAAFAGREEYPDAVLYKWLRNFYWRFFAQQFKRS 601 Query: 531 QAPVGTKI 538 P G KI Sbjct: 602 CLPDGPKI 609 >gi|301064187|ref|ZP_07204630.1| NAD+ synthase [delta proteobacterium NaphS2] gi|300441632|gb|EFK05954.1| NAD+ synthase [delta proteobacterium NaphS2] Length = 685 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 130/552 (23%), Positives = 227/552 (41%), Gaps = 78/552 (14%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V D A N+A R A+ L+LF E+ S Y EDL + + + A ++ Sbjct: 25 VADPAYNMACTLRLARRASDHHAALVLFPEMGFSAYTNEDLFHQDALLDAVRINLEEFIE 84 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--- 132 ++ D ++VG P + Q + N +++ G ++ + K LPNY E++EKR F+S Sbjct: 85 ESRDLSPVLLVGAPLRFQGKLFNCALVIYHGEVLGIVPKTYLPNYREYYEKRQFVSARCA 144 Query: 133 -------------YSNDPIV----FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + N+ I L + ICED+W + GA L +++ Sbjct: 145 LESMVRFQGQFVPFGNNLIFEAENLEGFSLHVEICEDMWVPIPPSAYGALAGATVLANMS 204 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG-ASFC---------- 222 AS K R + Q + +Y G+ +L +DG A C Sbjct: 205 ASNITVGKTDYRRMLCVSQSAKCVSAYLYSAAGYGESTTDLAWDGYAMICENQVLLAETD 264 Query: 223 -FDGQQQLAF-----------QMKHFSEQNFMTEWHYDQQLSQ----WNY--------MS 258 F ++Q+ F +M+ S Q+ + E H ++ + +N+ + Sbjct: 265 RFQTEEQIIFADIDLERLQQDRMRTTSFQDSVME-HRERLAAMHRIPFNFNVPLNMLPLE 323 Query: 259 DDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCA 309 + + ++P + D YN V L + KV+IG+SGG+DS + A Sbjct: 324 RNISRFPFVPDETSARDDRCYEVYNIQVQGLMKRMSAAGVKKVVIGVSGGLDSTQALIVA 383 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS-LM 366 A +D LG ++++ +P TS + +A ALG + I F ++ Sbjct: 384 AKTMDRLGLPRDHILGYTMPGFATSETTRNNAGRLMDALGVTAREIDIRPACQQVFKDIV 443 Query: 367 SQFLQ-EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSG 424 F + E+ + EN+Q+ R L L+N A++L T + SE+++G+ T GD Sbjct: 444 HPFAEGEKVYDVTFENVQAGQRTAHLFRLANFHNAIVLGTGDLSELALGWSTYGVGDQMS 503 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEV-IPPSILEKSPSAELRPHQT 478 +N + KT + L W + G S L + E I P ++ +P Q Sbjct: 504 HYNVNGSVPKTLIHHLIRWVANTGQFSKETGAVLTAIAETEISPELVPDDHGDPAKPSQK 563 Query: 479 DQESLPPYPILD 490 + ++ PY + D Sbjct: 564 TESAIGPYELQD 575 >gi|291526096|emb|CBK91683.1| NAD+ synthetase [Eubacterium rectale DSM 17629] Length = 650 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 146/634 (23%), Positives = 248/634 (39%), Gaps = 102/634 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + +GD N E ++ + L++F EL I+GY D+ +K + Sbjct: 7 RVAASSPEIYLGDCVNNADNIIHIAESLAKKDVQLVVFPELCITGYSCADMFLRKELLAQ 66 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEFH 124 +D +K+ D + VG P +D+ G L N + +G I+ + K +PNY EF+ Sbjct: 67 AQQELDRIKTALQDLSILVCVGLPIEDEAGRLFNCAAYVHSGEIVGIVPKTYIPNYGEFY 126 Query: 125 EKRTFISG------------YSNDP-------IVFRDIR---LGILICEDIWKNSNICKH 162 EKR F S +N P I+ +D+R +G ICED+W ++ Sbjct: 127 EKRWFTSADKRLSDEITLNYVANRPTVPFSPNIIIKDLRGAIVGTEICEDLWVSAPPSGE 186 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 L K GA + + +AS K + R +V Q +Y + G+ +L+F G Sbjct: 187 LCKAGANIIINPSASNDVIGKREYRRSLVAMQSGRCRAGYVYASSGAGESSTDLVFSGHC 246 Query: 221 FCFDGQQ------QLAFQM-KHFSEQNFM------TEWHYDQQLS-QWNYMSD---DSAS 263 D + + +M K SE + M +E D+ ++ + Y SD D Sbjct: 247 IIADNGRIAGETSDYSKRMNKKVSEDDVMSSGFVISEIDIDRCMNDRHRYNSDSWADVPD 306 Query: 264 TMYIPLQEEE--ADY---------------------NAC--VLSLR-----DYVQKNNFH 293 + + L E DY N C +LSL+ + Sbjct: 307 VIKVILNGENRMKDYQIWPKKVNPYPFVPSDKNNRKNRCMEILSLQAKGLEQRLISTGIK 366 Query: 294 KVIIGLSGGIDSALCAAIAVD---ALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 V++G+SGG+DS L + D ALG K N+ I +P T+ + A + G Sbjct: 367 NVVLGISGGLDSTLALLVCCDAFEALGIPKRNIYGITMPGFGTASTTKTIADRLMEEFGV 426 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I + ++ + ENIQ+R R +L +N +++ T + Sbjct: 427 TAVEVNIEAACRQHMKDIGH--PDDVFDVTYENIQARERTQVLFDYANMVGGLVIGTGDM 484 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQV--------FQLASWRNSHGITSGLGPLTEVI 460 SE+++G+ T GD + + KT V + AS + + L I Sbjct: 485 SELALGWCTYNGDHMSNYAVNCSVPKTLVKYIVQAYASECASKDEMKNVLCEIADLP--I 542 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES-----------FINNDQE 509 P +L P + Q +ES+ Y + D + + N ES F N + Sbjct: 543 SPELL--PPDKDGNIAQKTEESIGKYDLHDFFLYHFLRNGESRDRILKLAEIAFANVSKG 600 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 ++T+ ++KR P G K+ S Sbjct: 601 EIEKTLETFFTRFRQQQFKRSCIPDGPKVGTVSL 634 >gi|210134525|ref|YP_002300964.1| NAD synthetase [Helicobacter pylori P12] gi|238064811|sp|B6JKQ6|NADE_HELP2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|210132493|gb|ACJ07484.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori P12] Length = 260 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 117/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEVQKKGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + F ++ S N +R Sbjct: 61 SASMPESKTDALNLCEMFSIPYTEYSIAPYDKIFGFHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|317008977|gb|ADU79557.1| NAD synthetase [Helicobacter pylori India7] Length = 260 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P++ DA + +Y + P L F ++ S N +R Sbjct: 61 SVSVPENKTDALNLCEKFSIPYTEYSIAPYDALFGSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA + N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACYLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|62738501|pdb|1XNG|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Helicobacter Pylori gi|62738502|pdb|1XNG|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Helicobacter Pylori gi|62738503|pdb|1XNH|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Helicobacter Pylori Length = 268 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY ++ L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIVYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P++ DA + +Y + P + + F ++ S N +R Sbjct: 61 SVSMPENKTDALNLCEKFSIPYTEYSIAPYDAIFSSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|317181672|dbj|BAJ59456.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori F57] Length = 260 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSAL + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSALVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 LVSMPESKTDALNLCETFSIPYTEYSIAPYDAIFDSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPEKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|110667066|ref|YP_656877.1| NAD synthetase [Haloquadratum walsbyi DSM 16790] gi|109624813|emb|CAJ51221.1| NAD(+) synthase (glutamine-hydrolyzing) [Haloquadratum walsbyi DSM 16790] Length = 275 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 86/284 (30%), Positives = 138/284 (48%), Gaps = 20/284 (7%) Query: 253 QWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 Q + +S D+ + + +E E + + D V ++GLSGGIDS A +A Sbjct: 2 QQSVLSTDAPLDLRLSPEELETVESHVSQFITDIVADAGADGAVLGLSGGIDSTTVADMA 61 Query: 313 VDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 V+ALG ENV +++P + ++ DA A+ L Y+V+ I + FF + + + Sbjct: 62 VNALGAENVHGLVMPSEVNDDANMSDAEWVAEELDIPYEVIEIQPIAESFFEAIPEAADD 121 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 + + N+ R R + L+NH ++L T N+SE GY T YGD + NP+ +L Sbjct: 122 Q---MAVGNVYVRTRAVLNYFLANHENKIVLGTGNRSEALTGYYTKYGDQAVDCNPIGNL 178 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDD 491 YK QV QLA+ S G IP ++ K+PSA + QTD+E L Y +D Sbjct: 179 YKQQVRQLAA---SVG-----------IPEELVMKTPSAGMWVGQTDEEELGLGYDTVDA 224 Query: 492 IIKRIVENEESFINNDQEYN--DETVRYVEHLLYGSEYKRRQAP 533 I+ V+ S ++ + E + V L S++KR+ P Sbjct: 225 ILALHVDGPLSVDATVRQLDVTSEDITRVVELYEKSKHKRQMPP 268 >gi|15644957|ref|NP_207127.1| NAD synthetase [Helicobacter pylori 26695] gi|6093467|sp|O25096|NADE_HELPY RecName: Full=NH(3)-dependent NAD(+) synthetase gi|2313427|gb|AAD07396.1| NH(3)-dependent NAD+ synthetase (nadE) [Helicobacter pylori 26695] Length = 260 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY ++ L D+ VQK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIVYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P++ DA + +Y + P + + F ++ S N +R Sbjct: 61 SVSMPENKTDALNLCEKFSIPYTEYSIAPYDAIFSSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|163846947|ref|YP_001634991.1| NAD synthetase [Chloroflexus aurantiacus J-10-fl] gi|222524771|ref|YP_002569242.1| NAD synthetase [Chloroflexus sp. Y-400-fl] gi|163668236|gb|ABY34602.1| NAD+ synthetase [Chloroflexus aurantiacus J-10-fl] gi|222448650|gb|ACM52916.1| NAD+ synthetase [Chloroflexus sp. Y-400-fl] Length = 697 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 144/569 (25%), Positives = 232/569 (40%), Gaps = 88/569 (15%) Query: 2 LKKLKIAI--AQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 L +L +AI ++ V + IA ARRA E G L+LF EL IS Y +DL + Sbjct: 12 LARLAVAIPAVRIAEPVFNAERTIALARRAAAE----GAILVLFPELGISAYSNDDLFQQ 67 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + + A A+ T+ + +D A ++VG P + + + N V + G II V K LPN Sbjct: 68 STLLDAVEQALLTIAAAANDINALLLVGAPLRHEGRLFNCAVAIYRGQIIGVTPKSYLPN 127 Query: 120 YSEFHEKRTFISG----------------YSNDPI----VFRDIRLGILICEDIWKNSNI 159 Y EF+EKR F + + D I + + + ICED+W Sbjct: 128 YREFYEKRHFAAARDAIGDTIQLAGQNVPFGTDVIYDVTTLPGLAVHVEICEDLWTPLPP 187 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFD 217 GA L +L+AS K R + Q + +Y G+ +L +D Sbjct: 188 STFAALAGATVLCNLSASNITIGKADYRRALCMNQSARTLAAYLYSAAGPGESTTDLAWD 247 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFM-----TEWHYDQQLSQWNY---------------- 256 G + + + LA + E+ + E ++ Q ++ Sbjct: 248 GHALICENGELLAESQRFCDEEQIIFADVDLERLLQERARQTSFSDSIGDYRSHVRHMRR 307 Query: 257 ---------MSDDSASTMYIPL------QEEEADYNACVLSLRDYVQK---NNFHKVIIG 298 ++D S P +E Y A + + +Q+ KV+IG Sbjct: 308 IPLAITLPVVTDLRRSVARFPFVPNDPATRDERCYEAYNIQMHGLMQRMRSAGVEKVVIG 367 Query: 299 LSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS + AA +D LG ++NV +P TS Q+ +A A ALG + Sbjct: 368 VSGGLDSTQALIVAARTMDRLGLPRQNVLAYTMPGFATSSQTRRNAHALMTALGVSAHEI 427 Query: 354 PIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I + E + + EN+Q+ R + L L+N+ A+++ T + SE+ Sbjct: 428 DIRPSALQMLRDLGHPAGEGAAVYDVTFENVQAGERTSHLFRLANYHNAIVVGTGDLSEL 487 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILEKSP 469 ++G+ T GD +N + KT + L + I SG LG + SIL Sbjct: 488 ALGWCTYGVGDQMAHYNVNASVPKTLIQHLIRYV----IRSGELGDEANRVLESILATEI 543 Query: 470 SAEL--------RPHQTDQESLPPYPILD 490 S EL +P Q +E + PY + D Sbjct: 544 SPELVPASSSDDKPAQRTEEIIGPYALQD 572 >gi|188527135|ref|YP_001909822.1| NAD synthetase [Helicobacter pylori Shi470] gi|238691900|sp|B2USG0|NADE_HELPS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|188143375|gb|ACD47792.1| NH(3)-dependent NAD+ synthetase (nadE) [Helicobacter pylori Shi470] Length = 260 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + K+N +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KKNAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + N F ++ S N +R Sbjct: 61 SVSMPESKTDALDLCETFSIPYTEYSIAPYDAIFNSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|212224921|ref|YP_002308157.1| NAD synthetase [Thermococcus onnurineus NA1] gi|212009878|gb|ACJ17260.1| NH3-dependent NAD+ synthetase [Thermococcus onnurineus NA1] Length = 253 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 130/236 (55%), Gaps = 25/236 (10%) Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA A +AV ALG+E V +++PY +EDA + LG +Y ++ I +V+ F Sbjct: 37 IDSATTAYLAVKALGREKVLGLIMPYYENG--DVEDAKLVCENLGIEYKLINIRPIVDEF 94 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + L + G NI +R R +L A +N ++L TSN+SE+ GY T +GD Sbjct: 95 EKAVGE-LDVKSKG----NIMARTRMILLYAHANSRNYLVLGTSNRSELLTGYFTKWGDG 149 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 + + PL ++YKT+V++LA LG +P I++K P+A L QTD++ Sbjct: 150 ASDYAPLINIYKTEVWELA---------KSLG-----VPERIIQKKPTAGLWEGQTDEDE 195 Query: 483 LP-PYPILDDIIKRIVENE--ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 L Y +LD+I+ R+++ + + I + E V YVE L+ SE+KRR P+G Sbjct: 196 LGISYRLLDEILWRLIDLKMPKGEIAEELGIPLEKVEYVELLVKRSEHKRR-LPLG 250 >gi|308063191|gb|ADO05078.1| NAD synthetase [Helicobacter pylori Sat464] Length = 260 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 SVSMPESKTDALDLCETFSIPYTEYSIAPYDAIFDSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|308061680|gb|ADO03568.1| NAD synthetase [Helicobacter pylori Cuz20] Length = 260 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 SVSMPESKTDALNLCETFSIPYTEYSIAPYDAIFDSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|255321438|ref|ZP_05362598.1| NAD+ synthetase [Campylobacter showae RM3277] gi|255301591|gb|EET80848.1| NAD+ synthetase [Campylobacter showae RM3277] Length = 251 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 140/257 (54%), Gaps = 27/257 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQSLEDAA 340 L Y++K+ ++G+SGG+DSA+ AA+ + ++T +++P KY++ ++L DA Sbjct: 15 LASYLEKSGAKGFVLGVSGGLDSAVVAALC----ARTGIETHALLMPTKYSNERNLSDAL 70 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 K L + ++ I +++ F + + E+PS + N+ +R R +L S A Sbjct: 71 KLCKDLKITHKIIEIQPILDSFTAQIG----EQPSNLRMGNLSARARMCLLYDYSAKVNA 126 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +++ TSNKSE +GYGT+YGDM+ NP+ +L+KT++++LA LG I Sbjct: 127 LVVGTSNKSERLLGYGTIYGDMACALNPIGELFKTEIYELARE---------LG-----I 172 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 I+ K+PSA+L Q+D+ + Y LD++++ + E+ + E++ + V V Sbjct: 173 DEKIIAKAPSADLWEGQSDEADIGYTYQRLDEVLRLVQSKSEAELAC--EFDPKLVATVF 230 Query: 520 HLLYGSEYKRRQAPVGT 536 + +++K P+ + Sbjct: 231 SRMRANKFKLSLPPIAS 247 >gi|261837769|gb|ACX97535.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori 51] Length = 260 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 SVSMPESKTDALDLCETFSIPYTEYSIAPYDAIFDSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|288931110|ref|YP_003435170.1| NAD+ synthetase [Ferroglobus placidus DSM 10642] gi|288893358|gb|ADC64895.1| NAD+ synthetase [Ferroglobus placidus DSM 10642] Length = 256 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 119/239 (49%), Gaps = 31/239 (12%) Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAACAKALGCKYDVLPIHDLVNHF 362 DSA A ++ ALGK+ V +++P K +P+ +EDAA + LG + V+ I+++V F Sbjct: 34 DSATVAFLSARALGKDRVLGVIMPEKGVTPEEDIEDAAEVCRILGIDHRVVFINEIVESF 93 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S + G NI+ R+R IL +N ++ T NKSE+ +GY T YGD Sbjct: 94 ISKLGS------DGKALANIKPRVRMTILYFFANKHNLLVAGTGNKSELRIGYFTKYGDG 147 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 F P+ DLYKT+V++LA + LG +P I++K PSA L QTD++ Sbjct: 148 GVDFLPIGDLYKTEVWELAKY---------LG-----VPERIIKKKPSARLWKGQTDEDE 193 Query: 483 LP-PYPILDDIIKRI-----VENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 + Y LD I+K I VE I E V V L+ S +KR P+ Sbjct: 194 IGLSYKRLDSILKSIESGVPVEK----IPEVAGVTKEEVERVLKLIERSRHKREMPPIA 248 >gi|319941134|ref|ZP_08015470.1| NH(3)-dependent NAD(+) synthetase [Sutterella wadsworthensis 3_1_45B] gi|319805491|gb|EFW02293.1| NH(3)-dependent NAD(+) synthetase [Sutterella wadsworthensis 3_1_45B] Length = 637 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 137/586 (23%), Positives = 233/586 (39%), Gaps = 87/586 (14%) Query: 31 EEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLK---SDTHDGGAGIVVG 87 ++A D+++ EL +SGY DL + ++ +A++ +K G +V+G Sbjct: 39 DQAEALKADVLVLPELVLSGYTVADLFLRAPLLEGVLTALECIKDHLKRPESEGLIVVLG 98 Query: 88 FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--------------- 132 P + + N V L ++ + K +LPNY EF+E R F Sbjct: 99 APIRADGRLFNCAVFLQNSRVLGIVPKSHLPNYQEFYEARWFSPASEAVSSTLELLGDTV 158 Query: 133 -YSNDPIVFRDIRLGIL--ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE 189 + D I L I ICED+W GA + +L+AS K K R E Sbjct: 159 PFGTDLIFESASGLAIAAEICEDLWVAQPPAAAAAAAGANVIVNLSASNETAGKAKFRRE 218 Query: 190 IVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLA---FQMKHFS------- 237 +V Q + +Y + G+ +L+F G G + A +Q S Sbjct: 219 LVRLQSARSMCAYVYASSGEGESTTDLVFSGHLLAAAGGRIAAESIWQTGMISADIDLER 278 Query: 238 ---EQNFMTEWHYDQQLSQWNYM---SDDSASTMYIPLQEEEADY---NA---------- 278 E+ + + W + SA + P + + A + NA Sbjct: 279 IELERIRFRSFAQGVETKPWRRIHAAPTPSARSALWPAKVDPAPFIPKNADRRRERAREI 338 Query: 279 ----CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA---VDALGK--ENVQTIMLPYK 329 C L + ++K +V+IG+SGG+DS L +A +D LG+ ++ I +P Sbjct: 339 LRMQCA-GLTERLRKTGIARVVIGVSGGLDSTLALLVAAAAMDELGRPRSDILGISMPGF 397 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 TS + A A + LG ++ + I F+ + E+ +V EN Q+R R Sbjct: 398 GTSSGTRASAEALMRGLGIEFRTIDIRPACRQHFADIGH--PEDRYDVVFENAQARERTQ 455 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 ILM ++N ++L TS+ SE+++G+ T GD + + KT V L + Sbjct: 456 ILMDVANAVGGLVLGTSDMSELALGWATFNGDHMSMYAVNAGVPKTLVQYLVR------V 509 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN---- 499 + P E + +L S EL P Q+ + +L PY + D + ++++ Sbjct: 510 FGEMHPELEEVLAGVLATEISPELLPPDAAGRIQSTEAALGPYALHDFFLYHVMKSGFAR 569 Query: 500 -------EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +F D+ +T Y ++KR P G KI Sbjct: 570 AKIEALAAIAFPEVDKALLSKTAATFFRRFYAQQFKRSSMPDGPKI 615 >gi|109947532|ref|YP_664760.1| NAD synthetase [Helicobacter acinonychis str. Sheeba] gi|122973294|sp|Q17X65|NADE_HELAH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|109714753|emb|CAJ99761.1| NH(3)-dependent NAD+ synthetase [Helicobacter acinonychis str. Sheeba] Length = 260 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 113/218 (51%), Gaps = 27/218 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L QK F KV+ GLSGG+DSA+ ++ KEN +++P + P+S DA Sbjct: 16 LEKETQKRGFKKVVYGLSGGLDSAVVGVLSQKVF-KENAHALLMPSLVSMPESKSDALDL 74 Query: 343 AKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + +Y + P + +F ++ S N SR+R L S S Sbjct: 75 CETFSIPYTEYSIAPYDAIFCSYF--------KDASLTRKGNFCSRLRMAFLYDYSLKSN 126 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 127 SLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELAQHLN-------------- 172 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL+K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 IPKKILDKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|313679249|ref|YP_004056988.1| nh(3)-dependent nad(+) synthetase [Oceanithermus profundus DSM 14977] gi|313151964|gb|ADR35815.1| NH(3)-dependent NAD(+) synthetase [Oceanithermus profundus DSM 14977] Length = 283 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 21/276 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ + + + K ++ SGG+DS++ A+A ALG ENV + LP++ +SP+S+ A Sbjct: 28 IREELAQRGYAKAVVAASGGVDSSVTLALAARALGPENVHALSLPHRDSSPESVAHARLA 87 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ G + + I +V + + N+ +R R + S +A+ Sbjct: 88 AERFGVALETVDITPMVEGYAAQTPDLTPRRKG-----NVMARARMIVTFDKSEQYRALP 142 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T NK+E GY T + D S NPL DLYKTQV+ G+ LG +P Sbjct: 143 LGTGNKTERLFGYFTWHADDSPPVNPLGDLYKTQVW---------GLAEHLG-----VPD 188 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 I+ K+P+A+L P QTD+ L Y D I++ ++ Y E V V+ Sbjct: 189 EIVRKAPTADLEPGQTDEADLGVRYRRADVILEHYLKGYPDAYIVGLGYTPEEVALVKRR 248 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + + YK R P I++ + G L P+ + D Sbjct: 249 VNRTHYK-RHLPAVALISSTAIGEFYLRPLDFRLED 283 >gi|261839181|gb|ACX98946.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori 52] Length = 260 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY ++ L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIVYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P++ DA + +Y + P + F ++ S N +R Sbjct: 61 SVSMPENKTDALNLCETFSIPYTEYSIAPYDKIFGSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEQDLGYPYSVIDPLLKDI 210 >gi|51039824|tpg|DAA00348.1| TPA_exp: putative NH3-dependent NAD synthetase [Caulobacter vibrioides] Length = 586 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 127/481 (26%), Positives = 198/481 (41%), Gaps = 79/481 (16%) Query: 84 IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG----------- 132 IVVG P +D + N+ +++ G ++ V K LPNY EF+E+R F G Sbjct: 2 IVVGGPLRDAGRLYNTAIVIQGGKVLGVVPKSFLPNYREFYERRWFTPGAGLTGKTLTLA 61 Query: 133 -----YSNDPIVFRD-----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + D I+FR +G+ ICED+W + GAE L +L+AS Sbjct: 62 GQTVPFGTD-ILFRGEGVAPFTVGVEICEDVWTPTPPSTAQALAGAEILLNLSASNITIG 120 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + Q S + +Y G+ +L +DG + LA + FS Sbjct: 121 KSETRRLLCASQSSRMIAAYVYSAAGAGESSTDLAWDGHVDIHEMGALLA-ETPRFSTGP 179 Query: 241 FMTEWHYD-QQLSQ--------WNYMSDDSASTMY--IPLQ--EEEAD------------ 275 T D Q+L Q + M+ AST + +P E D Sbjct: 180 AWTFADVDVQRLRQERMRVGSFGDAMALSPASTPFRIVPFAFDAPEGDLALARPIERFPF 239 Query: 276 ---------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG 317 YN V L ++ + K++IG+SGG+DS L AA A+D LG Sbjct: 240 TPSDPARLRENCYEAYNIQVQGLARRLEASGLKKLVIGISGGLDSTQALLVAAKAMDQLG 299 Query: 318 --KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ--EE 373 + N+ LP TS ++ +A A KA+ L I + E Sbjct: 300 LPRSNILAYTLPGFATSDRTKSNAWALMKAMAVTAAELDIRPAATQMLKDLDHPFGRGEA 359 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDL 432 + EN+Q+ +R + L L+NH+ A+++ T + SE+++G+ T GD +NP Sbjct: 360 VYDVTFENVQAGLRTDYLFRLANHNAALVVGTGDLSELALGWCTYGVGDHMSHYNPNCGA 419 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES---LPPYPIL 489 KT + L + G +G T + IL S EL P + Q + + PY + Sbjct: 420 PKTLIQHLIRFVAHSG---DVGAETTALLDDILATEISPELVPGEAVQATESFVGPYALQ 476 Query: 490 D 490 D Sbjct: 477 D 477 >gi|118618969|ref|YP_907301.1| NAD synthetase [Mycobacterium ulcerans Agy99] gi|118571079|gb|ABL05830.1| glutamine-dependent NAD(+) synthetase NadE [Mycobacterium ulcerans Agy99] Length = 680 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 118/519 (22%), Positives = 214/519 (41%), Gaps = 81/519 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + + G+ L +F EL +SGY ED++ + + + Sbjct: 12 VRVAACTHHTTLGDPAANAASVLGLARQCHDDGVALAVFPELTLSGYSIEDILLQDALLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + + + + +V+G P + Q + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVQDVLLDVVTASANLLPVLVIGAPLRYQHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISG---YSNDPIVFRDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R +G + D+ G + ICED++ Sbjct: 132 ERRQVAAGDDERGTIRVCGADVPFGPDLLFAASDLPGFVLHVEICEDMFVPIPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATILANLSGSPITIGRAEDRALLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHFSE------QNFMTEWHYDQQLSQWNY---------MSDDSASTMY-- 266 + LA + + F + TE ++L + ++D ++ Sbjct: 252 ENGVLLA-ESERFPRGERRCVADVDTELLRSERLRMGTFDDNRRHHRSLADSFRPVVFRL 310 Query: 267 ------IPLQEE-------EAD-----------YNACVLSLRDYVQKNNFHKVIIGLSGG 302 I L+ E AD YN V L ++ N+ KV+IG+SGG Sbjct: 311 DPPAGDIGLRRELERFPFVPADPQRLQQDCNEAYNIQVSGLEQRLRALNYPKVVIGVSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH- 356 +DS +A A+ +E ++ LP T ++ +A AKALG ++ + I Sbjct: 371 LDSTHALIVAARAMDREGRPRSDILAFTLPGFATGDRTKNNAIKLAKALGVSFEEIDITE 430 Query: 357 ------DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 D + H FS E+ + EN+Q+ +R + L ++NH ++L T + SE Sbjct: 431 TARLMLDTIGHPFS-----SGEKVYDVTFENVQAGLRTDYLFRIANHRGGIVLGTGDLSE 485 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +G+ T GD +N + KT + L W S G Sbjct: 486 LGLGWSTYGVGDQMSHYNVNAGVPKTLIQHLMRWVISSG 524 >gi|308184133|ref|YP_003928266.1| NAD synthetase [Helicobacter pylori SJM180] gi|308060053|gb|ADO01949.1| NAD synthetase [Helicobacter pylori SJM180] Length = 260 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D+ VQK +F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEVQKRDFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P++ DA + +Y + P + + F ++ S N +R Sbjct: 61 LVSMPENKTDALDLCETFSIPYTEYSIAPYDAIFDSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|308182502|ref|YP_003926629.1| NAD synthetase [Helicobacter pylori PeCan4] gi|308064687|gb|ADO06579.1| NAD synthetase [Helicobacter pylori PeCan4] Length = 260 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 LVSMPESKTDALNLCETFSIPYTEYSIAPYDAIFDSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|332673175|gb|AEE69992.1| NAD+ synthetase [Helicobacter pylori 83] Length = 260 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 LVSMPESKTDALNLCETFSIPYTEYSIAPYDAIFDSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPEKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|317177145|dbj|BAJ54934.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori F16] Length = 260 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLYDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQRVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 LVSMPESKTDALDLCETFSIPYTEYSIAPYDAIFSSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|289582131|ref|YP_003480597.1| NAD+ synthetase [Natrialba magadii ATCC 43099] gi|289531684|gb|ADD06035.1| NAD+ synthetase [Natrialba magadii ATCC 43099] Length = 284 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 79/254 (31%), Positives = 125/254 (49%), Gaps = 21/254 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD V + I LSGGIDS A +AV+ALG +NV I LP ++ DA Sbjct: 35 IRDRVDAAGANGAEIALSGGIDSTTMAYLAVEALGADNVHAITLPKAVNEDTNMSDAERV 94 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----SGIVAENIQSRIRGNILMALSNHS 398 A+ LG +YDV+ I +++ L Q + G N +R+R I ++N Sbjct: 95 AEELGIEYDVIEIDPIMDEILELADAENQNKSEDRWEGRYVGNTSARVRMTITYLIANRE 154 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 ++L T N++E++ GY T YGD NPL +LYK QV Q+A+ LG + Sbjct: 155 NRIVLGTGNRAELATGYVTKYGDGGVDCNPLGNLYKQQVRQVAAH---------LGASED 205 Query: 459 VIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENE--ESFINNDQEYNDETV 515 V+ +K+P+ + +++D+E L Y LD ++ V+ +S + + V Sbjct: 206 VV-----QKTPTGGMVDYESDEEELGLGYDTLDAVLALSVDGNLPKSVVARLTDTTVADV 260 Query: 516 RYVEHLLYGSEYKR 529 +VE + SE+KR Sbjct: 261 SHVETMYEESEHKR 274 >gi|262384264|ref|ZP_06077399.1| NAD synthetase [Bacteroides sp. 2_1_33B] gi|262293967|gb|EEY81900.1| NAD synthetase [Bacteroides sp. 2_1_33B] Length = 640 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 116/501 (23%), Positives = 208/501 (41%), Gaps = 67/501 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPQVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDPI------VFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P+ + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC--- 222 A +F+L+AS K ++ Q + +Y + G+ +L+F G Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 223 ---------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW---NYMSDDSASTMYIP-- 268 F ++QL + QN + + Q + M + + + +P Sbjct: 246 GTLLRESERFSMEEQLV--ISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNR 303 Query: 269 -------------------LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 L+E E ++ V L V + ++G+SGG+DS L Sbjct: 304 TLDLTRAIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLA 363 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHF 362 + V DAL ++ + I +P T+ ++ +A ++LG + I D + HF Sbjct: 364 LLVTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKDACIQHF 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 424 KDINHDIHVHD---VTYENSQARERTQLLMDVANQENGLVIGTGDLSELALGWATYNGDH 480 Query: 423 SGGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 481 MSMYGVNGSIPKTLVKYLVEW 501 >gi|295091182|emb|CBK77289.1| NAD+ synthetase [Clostridium cf. saccharolyticum K10] Length = 666 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 123/569 (21%), Positives = 226/569 (39%), Gaps = 92/569 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A V D+ N + R E + +++F EL ++ Y DL +K + Sbjct: 6 LRVAAATPEVKVADVQFNREEICRLIGEGREKKAKIMVFPELCLTAYTCGDLFIQKPLLT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + L + T + VG P + + N + G I+ + KI +PNYSEF+ Sbjct: 66 AVKRELKALAAFTAGSDMLVFVGLPWEYNNKLYNVAAAIQNGCILGLVPKIWIPNYSEFY 125 Query: 125 EKRTF-----------ISGYS---NDPIVF-----RDIRLGILICEDIWKNSNICKHLKK 165 E+R F G I+F ++ +G ICED+W + Sbjct: 126 ERRHFNPWEFGTVTVEFDGQKIPLGTKIIFSCKNVENLAVGAEICEDVWVLNPPSIAHAA 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +++GQ + + +Y N G+ +L+F G + Sbjct: 186 AGATVIVNCSASDETTGKADYRRSLISGQSARLLCAYVYANAGEGESTQDLVFGGQNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD----QQLSQWNYMSDDSASTMYIPLQ---EEEADY 276 + L + + F + + + ++ Y ++ +++ + +EE + Sbjct: 246 ENGNILR-ESRRFENETIYADIDLERLECERRRMTTYQTEGREDYLFVEFELDLDEEKTW 304 Query: 277 ---------NACVLSLRDYVQKNNF--------------------------------HKV 295 N+ SL +V + F Sbjct: 305 GEENGQEAKNSGYDSLERFVDPSPFVPGNEADRARRCEEILMIQAMGLKKRLVHTHCQNA 364 Query: 296 IIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 ++G+SGG+DS L + V A + + + ++ +P T+ ++ +A + LG Sbjct: 365 VVGISGGLDSTLALLVTVKAFDMAGIPRSQIYSVTMPCFGTTDRTYNNACLLTRKLGATL 424 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I D VN F + + +PS + EN Q+R R +LM ++N + M++ T + Sbjct: 425 MEVDIRDAVNTHF----RDINHDPSVHDVTYENSQARERTQVLMDIANQAGGMVIGTGDM 480 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE+++G+ T GD + + KT V L + T G L V+ IL+ Sbjct: 481 SELALGWATYNGDHMSMYGVNASVPKTLVRHLVRY---FADTCGEEELKNVL-LDILDTP 536 Query: 469 PSAELRP-------HQTDQESLPPYPILD 490 S EL P Q ++ + PY + D Sbjct: 537 VSPELLPPEDNGTIAQKTEDLVGPYELHD 565 >gi|298377406|ref|ZP_06987359.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_19] gi|298265820|gb|EFI07480.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_19] Length = 640 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 124/553 (22%), Positives = 231/553 (41%), Gaps = 74/553 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPHVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDPI------VFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P+ + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC--- 222 A +F+L+AS K ++ Q + +Y + G+ +L+F G Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 223 ---------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW---NYMSDDSASTMYIP-- 268 F ++QL + QN + + Q + M + + + +P Sbjct: 246 GTLLRESERFSMEEQLV--ISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNR 303 Query: 269 -------------------LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 L+E E ++ V L V + ++G+SGG+DS L Sbjct: 304 ALDLTRVIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLA 363 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHF 362 + V DAL ++ + I +P T+ ++ +A ++LG + I + V HF Sbjct: 364 LLVTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACVQHF 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 424 KDIDHDIHVHD---VTYENSQARERTQLLMDVANQANGLVIGTGDLSELALGWATYNGDH 480 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRPHQ 477 + + KT V L W ++ + T+ L + I P ++ ++ Q Sbjct: 481 MSMYGVNGSIPKTLVKYLVEWVANNKVDEASRTTLLDIVDTPISPELIPADEHGNIK--Q 538 Query: 478 TDQESLPPYPILD 490 ++ + PY + D Sbjct: 539 KTEDLVGPYELHD 551 >gi|315586322|gb|ADU40703.1| NAD(+) synthase [Helicobacter pylori 35A] Length = 260 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 LVSMPESKTDALNLCETFSIPYTEYSIAPYDAIFSSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|150006982|ref|YP_001301725.1| NAD synthetase [Parabacteroides distasonis ATCC 8503] gi|149935406|gb|ABR42103.1| putative glutamine-dependent NAD+ synthetase [Parabacteroides distasonis ATCC 8503] Length = 640 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 124/553 (22%), Positives = 231/553 (41%), Gaps = 74/553 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPHVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDPI------VFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P+ + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC--- 222 A +F+L+AS K ++ Q + +Y + G+ +L+F G Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 223 ---------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW---NYMSDDSASTMYIP-- 268 F ++QL + QN + + Q + M + + + +P Sbjct: 246 GTLLRESERFSMEEQLV--ISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPSR 303 Query: 269 -------------------LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 L+E E ++ V L V + ++G+SGG+DS L Sbjct: 304 ALDLTRVIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLA 363 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHF 362 + V DAL ++ + I +P T+ ++ +A ++LG + I + V HF Sbjct: 364 LLVTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACVQHF 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 424 KDIDHDIHVHD---VTYENSQARERTQLLMDVANQANGLVIGTGDLSELALGWATYNGDH 480 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRPHQ 477 + + KT V L W ++ + T+ L + I P ++ ++ Q Sbjct: 481 MSMYGVNGSIPKTLVKYLVEWVANNKVDEASRTTLLDIVDTPISPELIPADEHGNIK--Q 538 Query: 478 TDQESLPPYPILD 490 ++ + PY + D Sbjct: 539 KTEDLVGPYELHD 551 >gi|291086857|ref|ZP_06344653.2| putative NH(3)-dependent NAD(+) synthetase [Clostridium sp. M62/1] gi|291077165|gb|EFE14529.1| putative NH(3)-dependent NAD(+) synthetase [Clostridium sp. M62/1] Length = 714 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 123/569 (21%), Positives = 226/569 (39%), Gaps = 92/569 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A V D+ N + R E + +++F EL ++ Y DL +K + Sbjct: 54 LRVAAATPEVKVADVQFNREEICRLIGEGREKKAKIMVFPELCLTAYTCGDLFIQKPLLT 113 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + L + T + VG P + + N + G I+ + KI +PNYSEF+ Sbjct: 114 AVKRELKALAAFTAGSDMLVFVGLPWEYNNKLYNVAAAIQNGCILGLVPKIWIPNYSEFY 173 Query: 125 EKRTF-----------ISGYS---NDPIVF-----RDIRLGILICEDIWKNSNICKHLKK 165 E+R F G I+F ++ +G ICED+W + Sbjct: 174 ERRHFNPWEFGTVTVEFDGQKIPLGTKIIFSCKNVENLAVGAEICEDVWVLNPPSIAHAA 233 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +++GQ + + +Y N G+ +L+F G + Sbjct: 234 AGATVIVNCSASDETTGKADYRRSLISGQSARLLCAYVYANAGEGESTQDLVFGGQNIIA 293 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD----QQLSQWNYMSDDSASTMYIPLQ---EEEADY 276 + L + + F + + + ++ Y ++ +++ + +EE + Sbjct: 294 ENGNILR-ESRRFENETIYADIDLERLECERRRMTTYQTEGREDYLFVEFELDLDEEKTW 352 Query: 277 ---------NACVLSLRDYVQKNNF--------------------------------HKV 295 N+ SL +V + F Sbjct: 353 GEENGQEAKNSGYDSLERFVDPSPFVPGNEADRARRCEEILMIQAMGLKKRLVHTHCQNA 412 Query: 296 IIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 ++G+SGG+DS L + V A + + + ++ +P T+ ++ +A + LG Sbjct: 413 VVGISGGLDSTLALLVTVKAFDMAGIPRSQIYSVTMPCFGTTDRTYNNACLLTRKLGATL 472 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I D VN F + + +PS + EN Q+R R +LM ++N + M++ T + Sbjct: 473 MEVDIRDAVNTHF----RDINHDPSVHDVTYENSQARERTQVLMDIANQAGGMVIGTGDM 528 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE+++G+ T GD + + KT V L + T G L V+ IL+ Sbjct: 529 SELALGWATYNGDHMSMYGVNASVPKTLVRHLVRY---FADTCGEEELKNVL-LDILDTP 584 Query: 469 PSAELRP-------HQTDQESLPPYPILD 490 S EL P Q ++ + PY + D Sbjct: 585 VSPELLPPEDNGTIAQKTEDLVGPYELHD 613 >gi|320449292|ref|YP_004201388.1| NAD+ synthetase [Thermus scotoductus SA-01] gi|320149461|gb|ADW20839.1| NAD+ synthetase [Thermus scotoductus SA-01] Length = 281 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 21/273 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ + + K I+ +SGG+DSA A+AV ALG++ V + LP++ +SP S E A Sbjct: 28 IREELAWRGYEKAIVAVSGGVDSATTLALAVRALGRKQVHALFLPHRDSSPLSREHAYLV 87 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ G + + I +V ++ M+ L G N+ +R R +L S +A+ Sbjct: 88 AETFGVDLEEVDITPMVEG-YAAMTPDLTPHRKG----NLMARARMMVLFDKSQAYQALP 142 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T NK+E GY T +GD + NPL DLYKTQV+ G+ LG +P Sbjct: 143 LGTGNKTERLFGYFTWHGDDTPPVNPLGDLYKTQVW---------GLARHLG-----VPQ 188 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 +++EK P+A+L P QTD+ L Y D I++ ++ Y E + V+ Sbjct: 189 AVVEKVPTADLIPGQTDEGDLGVRYLRADVILEHYLKGYPDAYIESLGYTQEEIGRVKER 248 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 + + +K R P +++ + G L P+ + Sbjct: 249 VNRTHWK-RALPTVALLSSTAIGEFYLRPLDYR 280 >gi|317180771|dbj|BAJ58557.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori F32] Length = 260 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 LVSMPESKTDALNLCETFSIPYTEYSIAPYDAIFSSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|328949749|ref|YP_004367084.1| NH(3)-dependent NAD(+) synthetase [Marinithermus hydrothermalis DSM 14884] gi|328450073|gb|AEB10974.1| NH(3)-dependent NAD(+) synthetase [Marinithermus hydrothermalis DSM 14884] Length = 282 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 19/201 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ + + K ++ +SGG+DSA A+AV ALG ENV + LP++ + P+SLE A Sbjct: 28 IREELAWRGYTKAVVAVSGGVDSATTLALAVRALGPENVHALALPHRDSRPESLEHARLV 87 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ G +V+ I +V + + N+ +R R +L S A+ Sbjct: 88 AQTFGVALEVVDITPMVEGYAAQTPDLTPHRKG-----NVMARCRMIVLFDKSMAYHALP 142 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T NK+E GY T D + NPL DLYKTQV+ LA + LG +P Sbjct: 143 LGTGNKTERLFGYFTWNADDTPPVNPLGDLYKTQVWALARY---------LG-----VPE 188 Query: 463 SILEKSPSAELRPHQTDQESL 483 ++EK P+A+L P QTD+ L Sbjct: 189 VVVEKPPTADLIPGQTDEADL 209 >gi|317010610|gb|ADU84357.1| NAD synthetase [Helicobacter pylori SouthAfrica7] Length = 260 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 27/218 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L V K F KV+ GLSGG+DSA+ ++ KEN +++P + P+S DA Sbjct: 16 LEKEVHKRGFKKVVYGLSGGLDSAVVGVLSQKVF-KENAHALLMPSSVSMPESKSDALNL 74 Query: 343 AKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + +Y + P + F ++ S N SR+R L S S Sbjct: 75 CETFSIPYTEYSIAPYDAIFGSHF--------KDASLTRKGNFCSRLRMAFLYDYSLKSH 126 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 127 SLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN-------------- 172 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL+K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 IPKKILDKPPSADLFIGQSDEKDLGYPYSVIDPLLKDI 210 >gi|319441771|ref|ZP_07990927.1| NAD synthetase [Corynebacterium variabile DSM 44702] Length = 688 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 128/560 (22%), Positives = 219/560 (39%), Gaps = 85/560 (15%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDT 77 D A N A E + + + +F EL ++GY +DLV + + A + A++TL + + Sbjct: 31 DPATNAQSILDAARELHDDHVGVAVFPELSLTGYAIDDLVLQDVLLDAVTDAVETLVAAS 90 Query: 78 HDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDP 137 D +VVG P + N V++ G I+ V K NLP Y EF+E+R + G D Sbjct: 91 IDLMPVLVVGAPLAHGNRLYNCAVVIHRGEILGVVPKSNLPTYREFYERRWYAPG---DD 147 Query: 138 IVFRDIRLG-----------------------ILICEDIWKNSNICKHLKKQGAEFLFSL 174 I IR+G ICED+W GA L +L Sbjct: 148 IQDATIRIGDNRALFGTDLLFEAADVKGLTFHAEICEDMWVPVPPSARAALNGATVLLNL 207 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ--DELIFDGASFC---------- 222 + SP + RH + + +Y G+ +++ +DG + Sbjct: 208 SGSPITQRRADDRHLLASSASLRCQAAYVYAAAGHGESTNDVAWDGLTMVHERGVLLRET 267 Query: 223 ---------------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD-------- 259 D +Q F + + +++ ++ D Sbjct: 268 ERFPDGTRYSVVDVDLDSIRQARLHQGTFDDNRRTLDDLGEREYRTVDFTLDPPRGEIGL 327 Query: 260 --DSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LC 308 D A ++P Q+ +N V L + K +IG+SGG+DS L Sbjct: 328 RRDLARFPFVPGDPARLAQDCYEAFNIQVAGLAQRLSAIGNPKPVIGVSGGLDSTHALLV 387 Query: 309 AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A A+D G + ++ +P TS + +A A+A+G + + I M Sbjct: 388 IARAMDRAGRPRSDILAYTMPGFATSEHTKSNAVKLAEAIGASIETIDIVPAATELLKKM 447 Query: 367 SQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMS 423 F EP + EN+Q+ +R + L L+NH +++ T + SEI++G+ T GD Sbjct: 448 HHPFGDGEPVYDVTFENVQAGLRTDYLFRLANHHGGIVVGTGDLSEIALGWCTYGVGDQM 507 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------Q 477 + + KT + L W + G+ T + S+L+ S EL P Q Sbjct: 508 SHYGVNCGVPKTLMQHLIRWVIAE--REGVDAATVEVLQSVLDTEISPELVPPGADGKVQ 565 Query: 478 TDQESLPPYPILDDIIKRIV 497 + + ++ PY + D + I+ Sbjct: 566 STESTIGPYALHDFTLWHIL 585 >gi|302386868|ref|YP_003822690.1| NAD+ synthetase [Clostridium saccharolyticum WM1] gi|302197496|gb|ADL05067.1| NAD+ synthetase [Clostridium saccharolyticum WM1] Length = 636 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 120/558 (21%), Positives = 231/558 (41%), Gaps = 74/558 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + V D N + +E + L++F EL ++ Y DL + + ++ Sbjct: 6 IRVAAATPDVKVADPEFNRERICEQIKEGIKNHAKLMVFPELCLTAYTCGDLFGQDALLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + +T +G P ++ + N+ V + G I+ + K LPNYSEF+ Sbjct: 66 RAKKELKEILKETKGHDLLCFIGMPWEESGKLYNTAVAVQNGKILGIVPKTCLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVFR--------------------DIRLGILICEDIW-KNSNICKHL 163 E R F G + P++ + + + +CED W N +H Sbjct: 126 ELRYFQPG-NEIPVMVKWEEDTVPMGANLLFACEDIPQLVVAAEVCEDAWVPNPPSIRH- 183 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + + +AS K R ++TG + + IY N G+ +L+F G + Sbjct: 184 AIAGATVMANCSASDETTGKDIYRRSLITGHSASLVCGYIYANAGEGESTQDLVFGGQNL 243 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD----DSASTMYIP--LQEEEAD 275 + LA + F + + ++ + + M+ D + +P +++EE + Sbjct: 244 IAENGTLLA-ESSRFGNKTVYGDMDLERLVHERRRMTTFPAADRNHYLVVPFRMKKEELE 302 Query: 276 YNACV-------------------------LSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + + L+ + I+G+SGG+DS L Sbjct: 303 LKRLIDPRPFVPDNESERNRRCEEILSIQAMGLKKRLAHTGCKHGIVGISGGLDSTLALL 362 Query: 311 IAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V A + +E + + +P T+ ++ ++A + LG + + I + V+ F Sbjct: 363 VTVRAFDMLKIPREQIHGVTMPCFGTTDRTYQNACTLTRTLGAELTEVNIREAVSLHFRD 422 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + Q +E I EN Q+R R +LM L+N M++ T + SE+++G+ T GD Sbjct: 423 IGQ--REGVHDITYENSQARERTQVLMDLANRLNGMVIGTGDMSELALGWATYNGDHMSM 480 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + + T G L+ V+ +L+ S EL P Q Sbjct: 481 YGVNSSVPKTLVRHLVRY---YADTCGEKDLSGVL-YDVLDTPVSPELLPPKDGEIAQKT 536 Query: 480 QESLPPYPILDDIIKRIV 497 ++ + PY + D + +I+ Sbjct: 537 EDLVGPYELHDFFLYQIL 554 >gi|262203770|ref|YP_003274978.1| NAD synthase [Gordonia bronchialis DSM 43247] gi|262087117|gb|ACY23085.1| NAD synthase [Gordonia bronchialis DSM 43247] Length = 678 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 139/566 (24%), Positives = 231/566 (40%), Gaps = 85/566 (15%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A PV+ D A N A+ +A +G L++F EL + GY +DL + + I Sbjct: 9 VRVAGAVPVLSLADPATNTARTIELMRQAADEGARLVVFPELGLCGYSADDLFHQDALID 68 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC + + + + + GA +VVG P Q +G+ N ++ G ++ V K LPNY EF+ Sbjct: 69 ACHTGLTEIIAASAGVGAVVVVGLPMQVGDGLFNCAAVVYNGRLLGVVPKSYLPNYREFY 128 Query: 125 EKRTFIS-----------GYSNDP----IVFR-----DIRLGILICEDIWKNSNICKHLK 164 E+R F + G + P ++F L + ICED W Sbjct: 129 EQRFFSAARDAIATTVTIGDTETPFGTDLIFDAADLPGFALHVEICEDGWVAIPPSTWAA 188 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+ SP K R + T + + +YV G+ +L +DG + Sbjct: 189 LGGATVLANLSGSPVTVGKEGYRKALCTSHSARLLAAHLYVAAGYGESTTDLAWDGDALI 248 Query: 223 FDGQQQLA-FQMKHFSEQNFMTEWHYDQQLSQWNYM----------SDDSASTM------ 265 + LA ++ S+Q + D+ + M +DD S Sbjct: 249 TENGTLLARSELFTMSDQVISADVDLDRLRQERMRMISLRDQAGDFADDLKSLRRIRFEF 308 Query: 266 ---------------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIG 298 ++P + D N V L ++ + K++IG Sbjct: 309 GSVETAARDDDLLRRVVPRFPFVPADSADRDERCREVRNIQVQGLAARLRATDIDKIVIG 368 Query: 299 LSGGIDSALCAAIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS L +AVD L + N+ +P T +L A A LG L Sbjct: 369 VSGGLDSTLALLVAVDTFDRLGLPRSNILGYTMPGFATGGATLRRAHALMDTLGVSGTEL 428 Query: 354 PIHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I + + E+ + EN+Q+ R + L L+NH A++L T + SE+ Sbjct: 429 DIRPSCEQMLADLDHPYSRGEKVFDVTFENVQAGERTSHLFRLANHLGAIVLGTGDLSEL 488 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHG-----ITSGLGP-LTEVIPPSI 464 ++G+ T GD +N + KT + L W + G TS L L +VI P + Sbjct: 489 ALGWCTYGVGDQMSHYNVNGSVPKTLIQHLIRWMIAVGEYSEDTTSTLVEILDDVITPEL 548 Query: 465 LEKSPSAELRPHQTDQESLPPYPILD 490 + P E Q+ ++++ PY + D Sbjct: 549 V---PPGEDGAIQSTEDTVGPYELHD 571 >gi|317179275|dbj|BAJ57063.1| NH(3)-dependent NAD+ synthetase [Helicobacter pylori F30] Length = 260 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DS + + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSTVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 + P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 LVSMPESKTDALDLCEKFSIPYTEYSIAPYDAIFSSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP SIL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKSILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|297379551|gb|ADI34438.1| NAD+ synthetase [Helicobacter pylori v225d] Length = 260 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 31/232 (13%) Query: 273 EADYNACVLSLRDYV----QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY + L D++ QK F KV+ GLSGG+DSA+ + KEN +++P Sbjct: 2 QKDYQKLIAYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPS 60 Query: 329 KYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 ++P+S DA + +Y + P + + F ++ S N +R Sbjct: 61 LVSTPESKTDALDLCETFSIPYTEYSIAPYDAIFDSHF--------KDASLTRKGNFCAR 112 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L S S ++++ TSNKSE +GYGTL+GD++ NP+ +L KT+V++LA N Sbjct: 113 LRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELLKTEVYELACHLN 172 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 173 --------------IPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDI 210 >gi|162146741|ref|YP_001601200.1| NAD synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161785316|emb|CAP54862.1| putative glutamine-dependent NAD(+) synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 742 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 133/568 (23%), Positives = 223/568 (39%), Gaps = 89/568 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D A N+A+ + G+ L +F EL +SGY EDL + + Sbjct: 72 RVAGCTLPVALADPATNVARMADMVRACHADGVALAVFPELGVSGYTIEDLRQQDVLLDG 131 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ L + T D +V G P + + + N VIL G ++ V K LPNY EF+E Sbjct: 132 VGAALAALAAATADLVPVVVAGAPLRHGDALYNCAVILHRGTVLGVVPKSYLPNYREFYE 191 Query: 126 KRTFISG----------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 R F G + D ++F + + I ICED+W + Sbjct: 192 ARQFAPGAGLRGQTIHVAGQTAPFGTD-LLFEAEDVPGLVIAIEICEDLWVPAPPSTDAA 250 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG---- 218 GA + + +AS K R + Q + +Y G+ +L +DG Sbjct: 251 LAGATVIANPSASDITVGKADTRDLLCRSQSARALCAYVYAAAGEGESTTDLAWDGQVSV 310 Query: 219 ---------------------ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM 257 A D +Q +M F++ H + W + Sbjct: 311 YENGALLAETVRFPQGPNRATADIDLDLLRQERARMGSFADNRAARGLHATGGDTGWRRV 370 Query: 258 S-------DDSASTMYI---------PLQEEEADYNACVL---SLRDYVQKNNFHKVIIG 298 D I P + E+ Y A + +L+ +Q +++IG Sbjct: 371 GFALAPPPGDLGLMRRIERFPFVPADPARLEQDCYEAWTIQVSALKQRLQATGTRRMVIG 430 Query: 299 LSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS +AV A LG++ V +P TS + +A A +ALG L Sbjct: 431 VSGGLDSTQALLVAVRAADELGLGRDAVLAYTMPGFGTSAGTQSNAMALMQALGVTAAEL 490 Query: 354 PIHDLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I M F P + EN+Q+ +R + L L+N +++ T + SE+ Sbjct: 491 DIRPTARMMLEQMGHPFASGVPQYDVTFENVQAGLRTDFLFRLANQHGGIVIGTGDLSEL 550 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW--------RNSHGITSGLGPLTEVIPP 462 ++G+ T GD +N L KT + L W ++ G+ + + L I P Sbjct: 551 ALGWCTYGVGDQMSHYNVNAGLPKTLIQHLIRWVISARRVDDDAAGVLASI--LDTEISP 608 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILD 490 ++ P+ E + Q+ +E + PY + D Sbjct: 609 ELV---PAGEDQALQSTEERIGPYALQD 633 >gi|209543272|ref|YP_002275501.1| NAD synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209530949|gb|ACI50886.1| NAD+ synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 684 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 134/568 (23%), Positives = 223/568 (39%), Gaps = 89/568 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D A N+A+ + G+ L +F EL +SGY EDL + + Sbjct: 14 RVAGCTLPVALADPATNVARMADMVRACHADGVALAVFPELGVSGYTIEDLRQQDVLLDG 73 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ L + T D +V G P + + + N VIL G ++ V K LPNY EF+E Sbjct: 74 VGAALAALAAATADLVPVVVAGAPLRHGDALYNCAVILHRGTVLGVVPKSYLPNYREFYE 133 Query: 126 KRTFISG----------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 R F G + D ++F + + I ICED+W + Sbjct: 134 ARQFAPGAGLRGQTIHVAGQTAPFGTD-LLFEAEDVPGLVIAIEICEDLWVPAPPSTDAA 192 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG---- 218 GA + + +AS K R + Q + +Y G+ +L +DG Sbjct: 193 LAGATVIANPSASDITVGKADTRDLLCRSQSARALCAYVYAAAGEGESTTDLAWDGQVSV 252 Query: 219 ---------------------ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM 257 A D +Q +M F++ H + W + Sbjct: 253 YENGALLAETVRFPQGPNRATADIDLDLLRQERARMGSFADNRAARGLHATGGDTGWRRV 312 Query: 258 S-------DDSASTMYI---------PLQEEEADYNACVL---SLRDYVQKNNFHKVIIG 298 D I P + E+ Y A + +L+ +Q +++IG Sbjct: 313 GFALAPPPGDLGLMRRIERFPFVPADPARLEQDCYEAWTIQVSALKQRLQATGTRRMVIG 372 Query: 299 LSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS +AV A LG++ V +P TS + +A A +ALG L Sbjct: 373 VSGGLDSTQALLVAVRAADELGLGRDAVLAYTMPGFGTSAGTQSNAMALMQALGVTAAEL 432 Query: 354 PIHDLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I M F P + EN+Q+ +R + L L+N +++ T + SE+ Sbjct: 433 DIRPTARMMLEQMGHPFASGVPQYDVTFENVQAGLRTDFLFRLANQHGGIVIGTGDLSEL 492 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW--------RNSHGITSGLGPLTEVIPP 462 ++G+ T GD +N L KT + L W ++ G+ + + TE+ P Sbjct: 493 ALGWCTYGVGDQMSHYNVNAGLPKTLIQHLIRWVISARRVDDDAAGVLASILD-TEISP- 550 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILD 490 E P+ E + Q+ +E + PY + D Sbjct: 551 ---ELVPAGEDQALQSTEERIGPYALQD 575 >gi|198276466|ref|ZP_03208997.1| hypothetical protein BACPLE_02661 [Bacteroides plebeius DSM 17135] gi|198270554|gb|EDY94824.1| hypothetical protein BACPLE_02661 [Bacteroides plebeius DSM 17135] Length = 646 Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 121/528 (22%), Positives = 217/528 (41%), Gaps = 76/528 (14%) Query: 33 ANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 A+ +G+ +I+F EL ++GY DL + ++ A+ + ++T +VG P Sbjct: 34 ADGKGIQIIVFPELNLTGYSCGDLFAQSLLLEQAELALMQIVNNTRQLDIISIVGMPVVV 93 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN-DPIVFR---------- 141 ++N V+ G I+ + K LPNY EF+EKR F S ++ D + R Sbjct: 94 NSTLMNCAVVFQKGKILGIVPKTYLPNYKEFYEKRWFTSAVAHPDSMNVRLCGQVVPMGT 153 Query: 142 -------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQ 194 D+ GI +CED+W L +GAE +F+L+A +K + ++ Q Sbjct: 154 NLLFDTPDVCFGIELCEDVWAPVPPSSALALKGAEIIFNLSADTENISKHQYLRSLLAQQ 213 Query: 195 ISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMK-HFSEQNFMTE------- 244 + ++ + G+ +++F G + ++ LA + F EQ ++E Sbjct: 214 SARCLAGYVFSSCGFGESTTDVVFAGNALIYENGSLLAASDRFSFEEQLVVSEIDVERLR 273 Query: 245 ------------------WHYDQQLSQWNYMSDDSASTM------YIPLQEEEAD----- 275 H Q +S S D T ++P E + D Sbjct: 274 GERLTNTTFSSSVRMYRDQHPMQHISTALVASRDLTLTRSVEPHPFVPSGERQLDERCEE 333 Query: 276 -YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT-----IMLPYK 329 ++ V L + N V++G+SGG+DS L + V K N+ + +P Sbjct: 334 IFSIQVAGLAKRLVHTNCKTVVLGISGGLDSTLALLVCVKTFDKLNLSRKGIVGVTMPGF 393 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 T+ ++ +A + +L + I D F + Q + + EN Q+R R Sbjct: 394 GTTDRTYHNALSLMSSLQVTTKEISIKDACIQHFQDIGQDMSVH--DVTYENGQARERTQ 451 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 ILM +N +++ T + SE+++G+ T GD + + KT V L +W G+ Sbjct: 452 ILMDYANKIGGLVIGTGDLSELALGWATYNGDHMSMYGVNASIPKTLVRYLVNWVAQTGV 511 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQESLPPYPILD 490 + L+ I++ S EL P Q ++ + PY + D Sbjct: 512 DT----LSRNTLLDIIDTPISPELIPADENGNIKQKTEDLVGPYELHD 555 >gi|327401263|ref|YP_004342102.1| NH(3)-dependent NAD(+) synthetase [Archaeoglobus veneficus SNP6] gi|327316771|gb|AEA47387.1| NH(3)-dependent NAD(+) synthetase [Archaeoglobus veneficus SNP6] Length = 259 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 84/239 (35%), Positives = 118/239 (49%), Gaps = 30/239 (12%) Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSP-QSLEDAAACAKALGCKYDVLPIHDLVNHF 362 DSA A + ALG ++V +++P + +P + +EDA K LG +Y ++ I+ VN F Sbjct: 36 DSACVAKLCTMALGSDSVLALIMPEEGVTPKEDVEDAVNLCKELGVEYRIIEINPFVNAF 95 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S + E I NI+ RIR +L +N + ++ T NKSE+ GY T YGD Sbjct: 96 VSKLG-----EEHKIAVANIKPRIRMILLYFHANSRRLLVAGTGNKSELMAGYFTKYGDG 150 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 F P+ DLYKT+VFQLA + LG IP I+ K PSA L QTD+E Sbjct: 151 GVDFLPIGDLYKTEVFQLARY---------LG-----IPERIVTKKPSARLWKGQTDEEE 196 Query: 483 LP-PYPILDDIIKRI-----VENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 + Y LD I+K + VE + +E VR VE S +KR P+ Sbjct: 197 MGISYEKLDAILKAMEKGVSVEEIPAVAGVSEEEVATVVRMVEL----SRHKREPLPLA 251 >gi|326791323|ref|YP_004309144.1| NAD+ synthetase [Clostridium lentocellum DSM 5427] gi|326542087|gb|ADZ83946.1| NAD+ synthetase [Clostridium lentocellum DSM 5427] Length = 644 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 138/620 (22%), Positives = 254/620 (40%), Gaps = 99/620 (15%) Query: 7 IAIAQLNP--VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I + + P VGD N+ + +E+ G + +F EL ++GY DL ++ + + Sbjct: 6 IKVCTITPKLSVGDCNYNLKQIYNCIKESETAGASIAVFPELCLTGYTCGDLFYQSNLLA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L T I+VG P + + N+ +L G ++ + K LPNY+EF+ Sbjct: 66 ETEKNIKQLLDATATSEQLILVGAPIAHEGHLFNTACVLFKGKLLGIVPKSFLPNYNEFN 125 Query: 125 EKRTFISGYS---------------NDPIVFRD-----IRLGILICEDIWKNSNICKHLK 164 EKR F + + + ++F+ LGI ICED+W + Sbjct: 126 EKRWFSAAHEILHSKMVYAGQNVTISSYLLFKAKHIPYFCLGIDICEDLWSPLSPSTCHT 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASFC 222 GA + +L+AS K+ +R +V +Y + +L+F G Sbjct: 186 IYGATIIANLSASNECVGKMNQRKTLVAQHSLKTMCSYLYTSSGIYESTSDLVFSGHQLI 245 Query: 223 FDGQQQLAFQMKHFSEQNFMT------EWHYDQQL-----------SQWNY--------- 256 ++G LA + + FS +N +T E Y+Q+L + NY Sbjct: 246 YEGGSLLA-ESELFSRENLITYATLDLERLYNQRLRLNYATSPLPFKELNYQIIEFDLAL 304 Query: 257 ----MSDDSASTMYIPLQEEEADYNAC--VLSLRDY-----VQKNNFHKVIIGLSGGIDS 305 + + +IP +EE+ C + +++ + ++ + +IIG+SGG+DS Sbjct: 305 QTKELEKNITPHPFIP-KEEKTRTQRCKSIFAIQTHGLARRMEHTHAEHLIIGVSGGLDS 363 Query: 306 ALCAAIAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALG-CKYDVLPIHDLV 359 L + V ++ N + + +P TS ++ ++A K LG + ++ + + Sbjct: 364 TLALLVCVRSVKLLNRPPCHIIGVTMPGFGTSDRTYQNAINLMKLLGITQKEISIVPSTL 423 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 H + + + EN Q+R R ILM L+N +++ + SE+++G+ T Sbjct: 424 QHLKDIEHDISIHDTT---YENAQARERTQILMDLANQYNGLVVGAGDLSELALGWATYN 480 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---- 475 GD + + KT + L + + PL + I IL S EL P Sbjct: 481 GDHMSMYGVNASVPKTLIRYLIEYVAYYESE----PLVQEILFDILATPVSPELLPTSDS 536 Query: 476 ---HQTDQESLPPYPILDDII----------KRIVENEESFINNDQEYNDET----VRYV 518 Q ++ + PY + D I +I + NN +Y++ET ++ Sbjct: 537 GDITQKTEDLVGPYELHDFFIYYMLRFGYAPSKIYHLAQMAFNN--QYSNETLLKWLKVF 594 Query: 519 EHLLYGSEYKRRQAPVGTKI 538 + ++KR P G K+ Sbjct: 595 YKRFFAQQFKRSCLPDGPKV 614 >gi|118431661|ref|NP_148287.2| NH(3)-dependent NAD(+) synthetase [Aeropyrum pernix K1] gi|152031642|sp|Q9YAI1|NADE_AERPE RecName: Full=Probable NH(3)-dependent NAD(+) synthetase gi|116062984|dbj|BAA80968.2| NH(3)-dependent NAD(+) synthetase [Aeropyrum pernix K1] Length = 286 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 99/172 (57%), Gaps = 5/172 (2%) Query: 275 DYN----ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 DYN A LR Y++ + ++G+SGG+DS+L A+AVDA+G V +++P + Sbjct: 16 DYNGVRQAITQFLRKYLEASGASGYVLGVSGGVDSSLALALAVDAVGSGRVTALIMPDRE 75 Query: 331 TSPQ-SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 +P+ +EDA ++ G ++ V+ I +V + S + F EE + N+++RIR N Sbjct: 76 VTPERDVEDALRLVRSFGVEHAVIDISPIVMVYISALPIFEDEEKDRVPVGNLRARIRAN 135 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 IL +N ++L T ++SE +GY T YGD + PL LYK+QV +LA Sbjct: 136 ILYYYANKLGKLVLGTGDRSEYLIGYFTKYGDAACDVAPLTVLYKSQVRRLA 187 >gi|302346564|ref|YP_003814862.1| NAD+ synthase [Prevotella melaninogenica ATCC 25845] gi|302150411|gb|ADK96672.1| NAD+ synthase [Prevotella melaninogenica ATCC 25845] Length = 656 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 124/491 (25%), Positives = 203/491 (41%), Gaps = 76/491 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+ + + A QG+++I+F EL I+GY +DL ++ + Sbjct: 6 IKVAAAIPAVKVADTKFNLIETEKQIAIAEGQGVEIIVFPELSITGYTCQDLFQQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L T ++VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 DTEQAVIELLEFTRQLDITVIVGAPVAVGALLLNCALVIQQGKLLGIVAKTFLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVFR----DIRL---------------GILICEDIWKNSNICKHLKK 165 EKR F S P R +IR+ I ICED+W + HL Sbjct: 126 EKRWFASSQDLRPQHIRFAGNNIRVTPELQIFRTSEGATFAIEICEDVWAPTPPSNHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+ S K ++ Q + +Y + G+ +++F G + F Sbjct: 186 AGAEIIFNLSTSDELIGKHTYLKSLLAQQSARTISGYVYSSSGFGESTQDVVFGGNALIF 245 Query: 224 DG----QQQLAFQM------KHFSEQNFMTEWHYDQQL--SQWNYMSDDSASTMYI---- 267 + +Q FQ+ +N +E + +Q S + T I Sbjct: 246 ENGSLVKQSERFQLDPQLVISEIDIENLRSERRTNSTFVNAQRPVASGLAGVTGQIDELA 305 Query: 268 ----------PLQE--------------------EEAD--YNACVLSLRDYVQKNNFHKV 295 P++E E D YN V L + N Sbjct: 306 LHVDCLPPLKPMREFTLTREFDQHPFIPKTENMQEACDEIYNIQVSGLAKRLVHTNCKSA 365 Query: 296 IIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 IIG+SGG+DS L + V D LG ++ + + +P T+ ++ ++A A + LG Sbjct: 366 IIGISGGLDSTLALLVVVKTFDKLGLDRKGIVGVTMPGFGTTGRTYKNAMALMERLGITI 425 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I V F + + S EN Q+R R ILM LSN +++ T + SE Sbjct: 426 REIDIKASVLQHFKDIGHAPEVHDS--TYENAQARERTQILMDLSNQMNGLVIGTGDLSE 483 Query: 411 ISVGYGTLYGD 421 +++G+ T GD Sbjct: 484 LALGWCTYNGD 494 >gi|167838551|ref|ZP_02465410.1| NAD synthetase [Burkholderia thailandensis MSMB43] Length = 710 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 140/572 (24%), Positives = 241/572 (42%), Gaps = 96/572 (16%) Query: 5 LKIAIAQLNPV-VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++IAIA + PV V D A N A+ A +A R+ +++ EL +S Y +DL +++ + Sbjct: 29 VRIAIA-IPPVRVADPAFNAARTIDAMRDAARERALVVVCPELGLSAYTCDDLFQQQALL 87 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A +A+D + + ++D A +VG P + + N ++ G I + K L NY EF Sbjct: 88 DAGLAALDDVVAASNDLAAVAIVGVPLRIGATLYNCAAVVHRGRICGIVPKTYLANYREF 147 Query: 124 HEKRTFISGYS----------------NDPIVFRD-----IRLGILICEDIWKNSNICKH 162 +E R F SG + ++F+ + + ICED+W + Sbjct: 148 YEARQFASGDALAQETVDLPMQAGIPCGSRLLFQARAQPLLTFHVEICEDLWVPIPPSSY 207 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA LF+L+AS K + R +V Q + Y G+ +L +DG Sbjct: 208 AALAGATVLFNLSASNATIAKAQYRRALVGNQSARCLAAYAYSCAGAGESTTDLAWDGHG 267 Query: 221 FCFDGQQQLAFQMKHFSEQ------NFMTEWHYDQQLSQWNY------------------ 256 F+ LA Q + F+ + E +++ Q ++ Sbjct: 268 MLFENGVLLA-QARRFAPTPQLLFADVDVERLASERMRQTSFAHAALRHQSACAAFRTIP 326 Query: 257 --MSDDSASTM----------YIP----LQEEEADYNAC--VLSLRDYVQKNNFHKVIIG 298 ++ DS + Y+P L+ E + + V L ++ +++IG Sbjct: 327 IDVAVDSDGVLPLARVCERFPYVPSDPALRHERCEEISAIQVQGLVTRMKAAGVERLVIG 386 Query: 299 LSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY--- 350 +SGG+DS L V A L +++V LP TS ++ AA ALGC++ Sbjct: 387 VSGGLDSTLALLTCVRAADALRLPRDHVLACTLPGFATSARTAGQAARLIAALGCRHIGI 446 Query: 351 DVLP-----IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 D+ P + DL +H FS E + EN+Q+ +R + L L+N A+++ T Sbjct: 447 DIRPACTRMLRDL-DHPFSR-----GEACYDVTFENVQAGMRTDYLFRLANRHGALVVGT 500 Query: 406 SNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP------LTE 458 + SE+++G+ T GD + + KT V L W G +G L Sbjct: 501 GDLSELALGWCTYGVGDQMSHYAVNASIPKTLVRYLVRWAAEQGPFAGAASPVLHDVLAT 560 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILD 490 I P ++ AE P Q + ++ P+ + D Sbjct: 561 AISPELIPGDAHAE--PAQQSETAVGPFELQD 590 >gi|15827765|ref|NP_302028.1| NAD synthetase [Mycobacterium leprae TN] gi|221230242|ref|YP_002503658.1| NAD synthetase [Mycobacterium leprae Br4923] gi|18202769|sp|Q9CBZ6|NADE_MYCLE RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|13093317|emb|CAC30413.1| possible NAD synthase [Mycobacterium leprae] gi|219933349|emb|CAR71557.1| possible NAD synthase [Mycobacterium leprae Br4923] Length = 680 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 118/510 (23%), Positives = 209/510 (40%), Gaps = 73/510 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD N A R + + G+ + +F EL +SGY ED++ + ++ Sbjct: 12 VRVAACTHHASIGDPTTNAASVLRLARQCHDDGVAVAVFPELTLSGYSIEDILLQDLLLE 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + + D +V+G P + + + N+ VI+ G ++ V K LP Y EF+ Sbjct: 72 AVEDTVLDIVVASADLLPVLVIGAPLRYRHRIYNTAVIIHRGVVLGVAPKSYLPTYREFY 131 Query: 125 EKRTFISGY-SNDPIVFRDIR--------------LGIL----ICEDIWKNSNICKHLKK 165 E+R G + I D+R LG++ ICED++ Sbjct: 132 ERRQLAPGDDEHGTIGIGDLRAPFGPDLLFAAADLLGLVLHVEICEDMFVPVPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASF 221 GA L +L+ SP + + R + + + + YV G+ E L +DG + Sbjct: 192 AGATVLANLSGSPITIGRAEDRR--LLARSASLRCLAAYVYAAAGEGESTTDLAWDGQTM 249 Query: 222 CFDGQQQLAFQMK-----HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-------- 268 ++ LA + H S + TE ++L + + + Sbjct: 250 IWENGVLLAESERFPKGEHRSVADVDTELLRSERLRMGTFNDNRRRHRALVEPFRRIEFR 309 Query: 269 ----------LQEEE------AD-----------YNACVLSLRDYVQKNNFHKVIIGLSG 301 L+E E AD YN V L ++ ++ KV+IG+SG Sbjct: 310 LEPPVGNIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSG 369 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T ++ +A +ALG + + I Sbjct: 370 GLDSTHALIVAARAMDREGRPRSDILAFTLPGFVTGDRTKSNATELCRALGVTFTEIDIR 429 Query: 357 DLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + F + E S + EN+Q+ +R + L L+N ++L T + SE+ +G Sbjct: 430 DTATLMLKKIGHPFSRGEVSYDVTFENVQAGVRTDYLFRLANQHGGIVLGTGDLSELGLG 489 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASW 443 + T GD +N + KT V L W Sbjct: 490 WSTYGVGDQMSHYNINAGVPKTLVQHLIRW 519 >gi|255015983|ref|ZP_05288109.1| NAD synthetase [Bacteroides sp. 2_1_7] Length = 640 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 115/501 (22%), Positives = 210/501 (41%), Gaps = 67/501 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPHVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDPI------VFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P+ + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC--- 222 A +F+L+AS K ++ Q + +Y + G+ +L+F G Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 223 ---------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW---NYMSDDSASTMYIP-- 268 F ++QL + QN + + Q + M + + + +P Sbjct: 246 GTLLKESERFSMEEQLV--ISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNR 303 Query: 269 -------------------LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 L+E E ++ V L + + ++G+SGG+DS L Sbjct: 304 TLDLTRAIDPHPFTPSGDALKERCEEIFHIQVAGLAKRILHAHAQTAVVGISGGLDSTLA 363 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHF 362 + V DAL ++ + I +P T+ ++ +A ++LG + I + V HF Sbjct: 364 LLVTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACVQHF 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 424 KDIDHDIHVHD---VTYENSQARERTQLLMDVANQANGLVIGTGDLSELALGWATYNGDH 480 Query: 423 SGGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 481 MSMYGVNGSIPKTLVKYLVEW 501 >gi|326384196|ref|ZP_08205878.1| NAD synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326197061|gb|EGD54253.1| NAD synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 673 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 135/566 (23%), Positives = 231/566 (40%), Gaps = 83/566 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +L A+ Q+ + D N ++ A+R+ + ++ F EL + GY +DLV + + Sbjct: 8 FARLAAAVPQV--ALADPRQNASRTIELIRRAHRESVAVVAFPELGLCGYSVDDLVQQDA 65 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + +A+ + + T D + VG P + + + N V++ G I+ V K LPNY Sbjct: 66 LLDEVDAALAAVVAATVDLMPVVAVGAPLRVDDALYNCAVLIHGGRILGVTPKSYLPNYR 125 Query: 122 EFHEKRTFISG----------------YSNDPIVFRD----IRLGILICEDIWKNSNICK 161 EF+E+R F + + D I D +R+ +CED W Sbjct: 126 EFYEQRFFAAARDAVRDTVVVGGQRVPFGTDLIFEADDVPGLRVHAEVCEDGWVAIPPST 185 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA L +L+ SP K R +VTG + +YV+ G+ +L +DG Sbjct: 186 WASLAGATVLLNLSGSPVTVGKQAYRRSLVTGHSARCIAAQLYVSAGFGESTTDLAWDGD 245 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYD-----QQLSQWNYMSD------DSASTM--- 265 + + LA + FS + + D Q+ ++ + D D A + Sbjct: 246 ALIAENGTLLA-RSAGFSMEPQLIVGDVDLDRLRQERARMISLRDQVGDFADRARSFRRV 304 Query: 266 ---------------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIG 298 ++P + D + V L ++ K++IG Sbjct: 305 SFTVGIPETTDGLRRAVPRFPFVPTGAADRDERCREVLDIQVQGLVARLRSTGIDKIVIG 364 Query: 299 LSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS L +AV DA+G + N+ +P T +L + +LG + L Sbjct: 365 VSGGLDSTLALLVAVQAFDAMGLPRTNIHAYTMPGFATGGATLARSHVLMDSLGVTGNEL 424 Query: 354 PIH-DLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I + L F EP + EN+Q+ R + L L+NH ++L T + SE+ Sbjct: 425 DIRPSCMQMLADLKHPFADGEPVYDVTFENVQAGERTSHLFRLANHLGGIVLGTGDLSEL 484 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++G+ T GD +N + KT + L W+ + T+ GP T IL+ S Sbjct: 485 ALGWCTYGVGDQMSHYNVNGSVPKTLIQHLIRWKIT---TARYGPDTIATLQEILDDVIS 541 Query: 471 AELRPHQTD------QESLPPYPILD 490 EL P D ++ + PY + D Sbjct: 542 PELVPADADGNIQSTEDHVGPYELHD 567 >gi|292490898|ref|YP_003526337.1| NAD+ synthetase [Nitrosococcus halophilus Nc4] gi|291579493|gb|ADE13950.1| NAD+ synthetase [Nitrosococcus halophilus Nc4] Length = 689 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 139/567 (24%), Positives = 224/567 (39%), Gaps = 86/567 (15%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + +A+ QL V D N + ++A L +F EL +S Y +DL ++ + Sbjct: 17 RAAVAVPQLQ--VADPIFNAKETEALLQQAAEHKSLLSVFPELGLSAYSCDDLFQQQVLL 74 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 C A+ + + VVG P Q + N + G ++ + K LPNY EF Sbjct: 75 DECQEALGQILKRSQKLPIIGVVGLPLQVDNLLFNCAAVFHQGRLLGIVPKTYLPNYREF 134 Query: 124 HEKRTFISG----YSNDPIVF-RDIRLG----------------ILICEDIWKNSNICKH 162 +E R F + P+ +D+ G I ICED+W + Sbjct: 135 YELRQFTPADYALRESIPLCGQKDVPFGNRLLFQVEEQPLFTFYIEICEDLWSPIPPSSY 194 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA L +L+AS K R + + Q S +Y G+ +L +DG Sbjct: 195 AALAGATVLINLSASNITVGKDDYRRLLASSQSSRCLAAYLYTAAGSGESTTDLAWDGHG 254 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS-ASTMY------------- 266 ++ L + + FS ++ + D Q + M +S T Y Sbjct: 255 MIYENGTCLT-ETQRFSYRSQLAMGDIDLDRLQQDRMRQNSFGQTRYRHKDLLATFRTIR 313 Query: 267 ----IPLQEE----------------EAD--------YNACVLSLRDYVQKNNFHKVIIG 298 +P+QE+ AD Y V L +Q KVIIG Sbjct: 314 FSAPLPIQEQVLLKRSYERFPYVPSNPADRDQRCQEVYEIQVQGLVKRLQATGLDKVIIG 373 Query: 299 LSGGIDSA----LCA-AIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS +CA A+ V L + V +P TS Q+L+ A A+GC+ + Sbjct: 374 ISGGLDSTQALIVCAHAMDVMKLPRTQVLAYTMPGFATSEQTLQQARRLMAAIGCQAHEI 433 Query: 354 PIH-DLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I + L + Q +P + EN+Q+ R + L L+N A+++ TS+ SE+ Sbjct: 434 DIRPSCMQMLKDLGHPYAQGKPVYDVTFENVQAGERTSHLFRLANLHGALVVGTSDLSEL 493 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++G+ T GD ++ + KT + + W + + LG I I E S Sbjct: 494 ALGWCTYGVGDHMAHYHVNASVPKTLIQYIVGWVSKN---QQLGIEASRILEEIRETEIS 550 Query: 471 AELRPH-------QTDQESLPPYPILD 490 EL PH Q +E + PY + D Sbjct: 551 PELIPHENNEQPAQRSEEVIGPYQLQD 577 >gi|160888957|ref|ZP_02069960.1| hypothetical protein BACUNI_01377 [Bacteroides uniformis ATCC 8492] gi|270293917|ref|ZP_06200119.1| conserved hypothetical protein [Bacteroides sp. D20] gi|156861424|gb|EDO54855.1| hypothetical protein BACUNI_01377 [Bacteroides uniformis ATCC 8492] gi|270275384|gb|EFA21244.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 641 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 122/508 (24%), Positives = 205/508 (40%), Gaps = 72/508 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + A+ +G+ +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNASEIEKEIIIADGKGVQIIAFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQMDIISILGMPVALNGVLLNAAVVIQKGRVLGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S ++F D G+ ICED+W L QG Sbjct: 126 EKRWFTSACDVAENSVRLCGQIIPMGRDLLFETADTTFGVEICEDLWAPIPPSSTLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPII--YVNQVGGQDE-----------L 214 AE LF+L+A N+ +H + IS I YV G E L Sbjct: 186 AEILFNLSAD----NEGIGKHNYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGL 241 Query: 215 IFDGAS-------FCFDGQQQLA-FQMKHFSEQ--------------------NFMTEWH 246 I++ + F F+GQ ++ ++H + TE+ Sbjct: 242 IYENGTLLAANERFSFEGQVVISEIDVEHLRTERRVNTTFAACHANCVSALPVRISTEYV 301 Query: 247 YDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + L+ I L E E ++ V L + +IG+SGG+DS Sbjct: 302 NSRDLNLTRTFEPHPFVPQGIALDERCEEVFSIQVSGLAQRLVHTKAKSAVIGISGGLDS 361 Query: 306 ALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LV 359 L + V D LG ++ + + +P T+ ++ +A +LG + I + + Sbjct: 362 TLALLVCVKTFDKLGWSRQGIVGVTMPGFGTTDRTYTNAIDLMNSLGVTVREVSIKEACI 421 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + + EN Q+R R ILM ++N + M++ T + SE+++G+ T Sbjct: 422 QHFKDIDHDVHVHDVV---YENAQARERTQILMDIANQTWGMVIGTGDLSELALGWATYN 478 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSH 447 GD + + KT V L W H Sbjct: 479 GDHMSMYGVNASVPKTLVKHLVKWVAEH 506 >gi|317479247|ref|ZP_07938382.1| NAD+ synthetase [Bacteroides sp. 4_1_36] gi|316904535|gb|EFV26354.1| NAD+ synthetase [Bacteroides sp. 4_1_36] Length = 641 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 122/508 (24%), Positives = 205/508 (40%), Gaps = 72/508 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + A+ +G+ +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNASEIEKEIIIADGKGVQIIAFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQMDIISILGMPVALNGVLLNAAVVIQKGKVLGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S ++F D G+ ICED+W L QG Sbjct: 126 EKRWFTSACDVAENSVRLCGQIIPMGRDLLFETADTTFGVEICEDLWAPIPPSSTLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPII--YVNQVGGQDE-----------L 214 AE LF+L+A N+ +H + IS I YV G E L Sbjct: 186 AEILFNLSAD----NEGIGKHNYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGL 241 Query: 215 IFDGAS-------FCFDGQQQLA-FQMKHFSEQ--------------------NFMTEWH 246 I++ + F F+GQ ++ ++H + TE+ Sbjct: 242 IYENGTLLAANERFSFEGQVVISEIDVEHLRTERRVNTTFAACHANCVSALPVRISTEYV 301 Query: 247 YDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + L+ I L E E ++ V L + +IG+SGG+DS Sbjct: 302 NSRDLNLTRTFEPHPFVPQGIALDERCEEVFSIQVSGLAQRLVHTKAKSAVIGISGGLDS 361 Query: 306 ALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LV 359 L + V D LG ++ + + +P T+ ++ +A +LG + I + + Sbjct: 362 TLALLVCVKTFDKLGWSRQGIVGVTMPGFGTTDRTYTNAIDLMNSLGVTVREVSIKEACI 421 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + + EN Q+R R ILM ++N + M++ T + SE+++G+ T Sbjct: 422 QHFKDIDHDVHVHDVV---YENAQARERTQILMDIANQTWGMVIGTGDLSELALGWATYN 478 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSH 447 GD + + KT V L W H Sbjct: 479 GDHMSMYGVNASVPKTLVKHLVKWVAEH 506 >gi|169334890|ref|ZP_02862083.1| hypothetical protein ANASTE_01296 [Anaerofustis stercorihominis DSM 17244] gi|169257628|gb|EDS71594.1| hypothetical protein ANASTE_01296 [Anaerofustis stercorihominis DSM 17244] Length = 637 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 137/595 (23%), Positives = 252/595 (42%), Gaps = 92/595 (15%) Query: 31 EEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPR 90 +EA ++G + + EL IS Y DL F+ + ++ C ++ L T D IVVG P Sbjct: 33 KEAKKEGAKIFITPELSISSYTCADLFFQDTLLEKCEEELEKLVEKTADDDIFIVVGMPI 92 Query: 91 QDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--------YSNDPIVF-- 140 + + + N V G I+ V K +P +SEF+EKR F SG + + F Sbjct: 93 KYKNALYNCAVAFLNGEILGVIPKEFIPTHSEFYEKRWFASGKDVSDELSLAGQEVFFGQ 152 Query: 141 ------RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQ 194 +D+ +GI +CED+W L GA + +++AS +K + R +++ Q Sbjct: 153 MLFKLRKDLTVGIEVCEDLWVPIAPSAKLALSGANLILNISASNEVVSKDEYRTNLISSQ 212 Query: 195 ISHVHLPIIYVNQV--GGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLS 252 + YV+ +L+F G+S + L + K F +N +T + D Q Sbjct: 213 SAKCLCAYAYVSAGVHESTTDLLFGGSSLIAENGIILN-KGKRFERENQLTSAYIDLQKL 271 Query: 253 QWNYMSDDSASTM--------------------------------YIPLQEEE------A 274 + + S S + P E + Sbjct: 272 NFQRRQNISFSDSREQYEEFYEEIECEFENDIDITEFDRFVDPHPFTPNDENQRIERCNE 331 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYK 329 +N +L ++ K+++G+SGG+DS L +A L EN+ I +P Sbjct: 332 IFNIQSSALAKRLEHTGLKKLVVGISGGLDSTLALLVATQTMKLLNLPSENIIGITMPGF 391 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIR 387 T+ ++ +A K+L + I + +L + ++ + + + EN Q+R R Sbjct: 392 GTTDRTYTNALDLMKSLNVTIKEISIKEAA----TLHMKDIEHDINIHDVTYENTQARER 447 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 +LM ++N + A+L+ T + SE+++G+ T GD + + KT V L R Sbjct: 448 TQVLMDMANKNGAILVGTGDLSEMALGWCTYNGDHMSMYGVNASVPKTLVSHLV--RTVA 505 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTD-------QESLPPYPILDDIIKRIV--- 497 I+ T+ I IL+ S EL P D ++++ PY + D + + Sbjct: 506 MISDD---KTKDILLDILDTPVSPELLPPTKDGKIAQKTEDNIGPYELHDFFLYYFIRFG 562 Query: 498 --ENEESFINND---QEYNDETV-RYVEHLL---YGSEYKRRQAPVGTKITAKSF 543 +++ F+ +Y+DET+ +++ + + + S++KR P K+ + S Sbjct: 563 AKKDKLHFLAKQAFKDKYSDETIEKWLNNFMKRFFISQFKRSCTPDAPKVGSVSL 617 >gi|170743014|ref|YP_001771669.1| NAD synthetase [Methylobacterium sp. 4-46] gi|168197288|gb|ACA19235.1| NAD synthase [Methylobacterium sp. 4-46] Length = 679 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 122/496 (24%), Positives = 206/496 (41%), Gaps = 75/496 (15%) Query: 23 IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGA 82 +A ARR + QG+ L +F EL +S Y EDL+ + + + A +A+ L + T D Sbjct: 33 LALARRCHD----QGVALAVFPELCLSAYAIEDLLLQDTLLDAVEAALADLAARTRDLLP 88 Query: 83 GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR- 141 +VVG P + + V N+ V + G ++ V K LPNY EF+EKR F G R Sbjct: 89 LLVVGAPLRHRNRVYNAAVFVHRGRVLGVVPKSYLPNYREFYEKRHFAPGAGIAGAAIRL 148 Query: 142 -------------------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + +G+ +CED+W GA L +L+ SP Sbjct: 149 GGEEVPFGTDLLFGAEDLPGLVIGVDVCEDMWIPVPPGALAALAGASVLVNLSGSPITIG 208 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQN 240 + + R + + +Y G+ +L +DG + ++ +A + + F Sbjct: 209 RAESRKLLCQSASARCLAAYVYAAAGPGESTTDLAWDGQTVIYEDGTLIA-EGERFPAGP 267 Query: 241 FMTEWHYD-----QQLSQWNYMSDDSASTM-----------------------------Y 266 +T D Q+ +Q D++ + + + Sbjct: 268 LVTLADIDLDRLRQERAQMGSFDDNARAVLGERPWRRVPFTVSPPSADLGLARTVERFPF 327 Query: 267 IP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG 317 +P Q+ YN V L ++ KV+IG+SGG+DS + AA A D LG Sbjct: 328 VPADPARLAQDCYEGYNIQVAGLAQRLRAIRTEKVVIGISGGLDSTHALIVAAKAFDRLG 387 Query: 318 --KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-FLQEEP 374 + N+ T +P TS ++ +A ALG L I + M F + EP Sbjct: 388 LPRTNILTYTMPGFATSAETKGNAHRLMAALGTAAVELDIRPAARQMLADMGHPFGRGEP 447 Query: 375 S-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDL 432 + EN+Q+ +R + L L+N + A+++ T + SE+++G+ T GD + + Sbjct: 448 VYDVTFENVQAGLRTDFLFRLANQNDAIVVGTGDLSELALGWCTYGVGDQMSHYGVNAGV 507 Query: 433 YKTQVFQLASWRNSHG 448 KT + L W + G Sbjct: 508 PKTLIQHLIRWVVASG 523 >gi|317126459|ref|YP_004100571.1| NAD+ synthetase [Intrasporangium calvum DSM 43043] gi|315590547|gb|ADU49844.1| NAD+ synthetase [Intrasporangium calvum DSM 43043] Length = 680 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 146/646 (22%), Positives = 262/646 (40%), Gaps = 121/646 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L V D A N + +G + +F EL ++GY +DL+ + + A Sbjct: 13 RVAACTLPVAVADPARNADAVLEQARACSDEGAAVAIFPELCLTGYAIDDLLLQDPLLDA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI L + + +VVG P V N V++ G I+ V K LP Y EF+E Sbjct: 73 AEEAIARLVEASAELLPVLVVGAPLVRGARVFNCAVVIHRGAILGVAPKAYLPTYREFYE 132 Query: 126 KRTF------------ISGYS---NDPIVFR--DIR---LGILICEDIWKNSNICKHLKK 165 +R F ++G+S ++FR D+ LG+ +CED+W Sbjct: 133 RRHFGAGDDQRGQTIEVAGWSVPFGTDLLFRATDLEGFVLGVEVCEDMWIPVPPSAEAAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASF 221 GA L +++ SP + + RH + + + V Y+ G+ E L +DG + Sbjct: 193 AGATILVNISGSPITVGRAEDRHLLC--RSASVRCLSAYLYAAAGEGESTTDLSWDGQTM 250 Query: 222 CFDGQQQLAFQMKHFSE---------------QNFMTEWHYD------------------ 248 ++ LA + + F + Q M +D Sbjct: 251 IYERGTLLA-ETERFPDGPRRSVADIDLDMLRQERMRMGTFDDNRRTLTDRVSGFRTVEF 309 Query: 249 ------------QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 +++ ++ ++ DD A + L EA YN V L ++ +++ Sbjct: 310 EVGPPGGDIGLMRKVDRFPFVPDDEAR---LALDCYEA-YNIQVSGLEQRLRAIGQPRIV 365 Query: 297 IGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 IG+SGG+DS + AA A+D LG + ++ +P TS + ++A ++LG ++ Sbjct: 366 IGVSGGLDSTHALIVAAKAMDRLGRPRSDILAFTMPGFATSAHTKDNAIRLMESLGVTWE 425 Query: 352 VLPIHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 L I M EE + EN+Q+ +R + L ++N ++L T + S Sbjct: 426 ELDIRPAATEMLKGMDHPFARGEEVYDVTFENVQAGMRTDFLFRIANQRGGIVLGTGDLS 485 Query: 410 EISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNS------HGITSGLGPLTEVIPP 462 E+++G+ T GD + + KT + L W S H + L L I P Sbjct: 486 ELALGWSTYGVGDQMSHYGVNAGVPKTLMQHLIRWVVSSAQFEEHVNATLLSILATEITP 545 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE-----NEESFIN------------ 505 ++ P+ E Q+ Q + PY + D + ++ ++ +F++ Sbjct: 546 ELI---PAKEGEKPQSTQAQIGPYSLQDFNLYHVLRWGYRPSKIAFLSWHAWHDAESGDW 602 Query: 506 -------NDQEYNDETV-RYVEHLL---YGSEYKRRQAPVGTKITA 540 EY+ T+ R++E L + +++KR P G K+ A Sbjct: 603 PAGYPAAERAEYDLATIRRWLEVFLRRFFANQFKRSALPNGPKVAA 648 >gi|148555509|ref|YP_001263091.1| NAD synthetase [Sphingomonas wittichii RW1] gi|148500699|gb|ABQ68953.1| NAD(+) synthase (glutamine-hydrolyzing) [Sphingomonas wittichii RW1] Length = 687 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 142/632 (22%), Positives = 243/632 (38%), Gaps = 108/632 (17%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 VGD+A N A A+ +G+DL++ EL +S Y +DL + + + + + + + Sbjct: 27 VGDVAANAAGILDLARRADAEGVDLLVLPELALSSYAIDDLHLQDAQLDRVEAELAGIVA 86 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 + D ++VG P + + N+ V++ G I+ V K LPNY E++EKR F G Sbjct: 87 ASADLAPVLLVGAPIRRNGRLYNTAVVVSRGRILGVVPKSFLPNYREYYEKRWFAPGAGL 146 Query: 136 DPIVFR--------------------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + R D + ICED W GA L +L+ Sbjct: 147 TGLALRLCGQEVPFGPDLVFAAADLADFSFHVEICEDYWAPLPPSTAGAMAGALILCNLS 206 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLA--- 230 AS K ++R + Q + Y G+ +L +DG + + Q LA Sbjct: 207 ASNIIVGKARERALLAASQSTRAIAAYCYSASGPGESTTDLAWDGQAMIHELGQMLAEST 266 Query: 231 ----------------------FQMKHFS---------EQNFMTEWHYDQQLSQWNYMSD 259 +M F+ E F T + + Sbjct: 267 RFGMDPELIAADVDVARLRLERMRMGTFNDCAAANGHPEARFRTIGFEHRPHRADVGLRR 326 Query: 260 DSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAA 310 A ++P E D +N V L + ++IG+SGG+DS + AA Sbjct: 327 PVARFPFVPADPRELDADCYEAFNIQVDGLIKRFRSTRGKAMVIGVSGGLDSTHALIVAA 386 Query: 311 IAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 + D LG + ++ +P T + +A A +ALG + + I M Sbjct: 387 KSCDRLGLPRSAIRGYTMPGFATGDATKANAWALMRALGITAEEIDIRPAARQMLGDMGH 446 Query: 369 -FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGG 425 F Q EP + EN+Q+ +R + L L+N ++ T + SE+++G+ T GD Sbjct: 447 PFAQGEPVYDVTFENVQAGLRTDYLFRLANQHDGFVVGTGDLSELALGWCTYGVGDQMSH 506 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTD 479 + + KT + L W T P T+ I +IL S EL P Q+ Sbjct: 507 YAVNAGVPKTLIQYLIRWCVR---TGQFDPATDDILTAILGTEISPELVPADASGAIQST 563 Query: 480 QESLPPYPILDDIIKRIVE-----NEESFI-------------------NNDQEYNDETV 515 + + PY + D + + ++ +F+ + Y+ T+ Sbjct: 564 ESKVGPYELNDFFLHHVARLGLKPSKVAFLAWHAWKDADAGLWPAGFPDDLRNAYDLATI 623 Query: 516 R-YVEHLLYG----SEYKRRQAPVGTKITAKS 542 R ++E L+ S++KR P G K++A + Sbjct: 624 RSWLEKFLFRFFTISQFKRSAIPNGPKLSAAA 655 >gi|296282548|ref|ZP_06860546.1| NAD synthetase [Citromicrobium bathyomarinum JL354] Length = 690 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 132/588 (22%), Positives = 230/588 (39%), Gaps = 105/588 (17%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A P V D++GN + +A+ G+D ++ EL ++GY +DL + + I Sbjct: 17 VRVATCTPCVRPADVSGNAKSIVQIARDAHEAGVDFAVYPELCVTGYAIDDLHLQSAVID 76 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ + ++ +V+G P + + N + + G ++ V K LPNY EF+ Sbjct: 77 AAETAVARIIEESAGLTPVLVIGAPVRRGSRLYNCALAISNGRLLGVVPKSYLPNYREFY 136 Query: 125 EKRTFISG----------------YSNDPIVFRD----IRLGILICEDIWKNSNICKHLK 164 EKR F G + D I D GI ICED W Sbjct: 137 EKRQFTRGHNCQGLDVTIAGHEAPFGTDVIFAADNLPGFVFGIEICEDFWAPQPPGMMAA 196 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG-------------- 210 GA L +L+ASP + RH S Y G Sbjct: 197 MAGATILANLSASPVTIGRASDRHLHCASSSSRGMCAYAYSASGHGESTTDLAWDGQGVI 256 Query: 211 -------QDELIFD-GASFCF------------------------DGQQQLAFQMKHFSE 238 Q+ + FD GA C G+ + ++ F+ Sbjct: 257 YELGELMQESVRFDRGAELCVIDIDTQRIVNNRTQNGTFHDASEAAGRPEDWYRRVGFTH 316 Query: 239 QNFMTE----WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 E W + + ++ ++ DD T++ E N V +L ++ Sbjct: 317 NMRAAETVGGWGLKRPVRRFPFVPDDP-DTLHEDCYEA---VNIQVDALMRRIEATRPKS 372 Query: 295 VIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC- 348 +++G+SGG+DS L A +A D LG +E ++ +P TS ++ ++A A G Sbjct: 373 LVLGISGGLDSTHALLVACVACDRLGLPRETIRGYTMPGFGTSDRTKDNALKLMDAAGIT 432 Query: 349 --KYDVLPIHDL----VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 D++P L + H F+ +E EN+Q+ +R + L L+ H + Sbjct: 433 AETIDIVPAAQLMLKDIGHPFA-----DGKEVYDTTFENVQAGLRTDYLFRLAGHHGGFV 487 Query: 403 LTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW-----RNSHGITSGLGPL 456 + T + SE+++G+ T GD + + KT + L W + SH + L + Sbjct: 488 IGTGDLSELALGWCTYGVGDQMSHYGVNSGVPKTLIQYLMRWMIETDQFSHDLNEVLEDV 547 Query: 457 --TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES 502 TE+ P E P+ Q+ ++ + PY + D + I + +S Sbjct: 548 LGTEISP----ELVPAGADGAIQSTEDHIGPYALHDFFLHHIARHGQS 591 >gi|289581216|ref|YP_003479682.1| NAD+ synthetase [Natrialba magadii ATCC 43099] gi|289530769|gb|ADD05120.1| NAD+ synthetase [Natrialba magadii ATCC 43099] Length = 332 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 84/302 (27%), Positives = 140/302 (46%), Gaps = 54/302 (17%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 EA + V S++ V H V++ +SGG+DS + A +AV+ALG E V + LP T Sbjct: 31 EAVRSQIVDSIQQRVADAGAHGVVVAMSGGLDSTVTATLAVEALGPERVLGLTLPCHKTE 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ-----------------EEPS 375 + DA A LG ++ + + L+ F ++ L+ ++ S Sbjct: 91 QRDARDARTLAAGLGMEFAEIQLRPLLELFDDTVASVLECRLDGSRDGSRDRDGIEDDDS 150 Query: 376 GIVAE--------------------NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 G E N+ +R+R + +N + ++L T+N+SE+++GY Sbjct: 151 GRDGESTSGTDSASGRPNERNCELGNVVARLRMSCAYYAANREQRLVLGTANRSELALGY 210 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T YGD + P+ DLYKT+V LA +G +P I+ KSP+A Sbjct: 211 FTKYGDGAADTYPIGDLYKTEVRALAQR---------IG-----VPRRIISKSPTAGFSA 256 Query: 476 HQTDQESL-PPYPILDDIIKRIVENEESFINNDQEYND--ETVRYVEHLLYGSEYKRRQA 532 QTD + L PY +D ++ R+VE ++S + + + ET R + +E+KR + Sbjct: 257 DQTDADELGAPYETIDPLLFRLVEQDQSVADAAADLDLDWETARTIAWRCARTEHKRGRP 316 Query: 533 PV 534 PV Sbjct: 317 PV 318 >gi|256842008|ref|ZP_05547513.1| NAD synthetase [Parabacteroides sp. D13] gi|256736324|gb|EEU49653.1| NAD synthetase [Parabacteroides sp. D13] Length = 640 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 115/501 (22%), Positives = 208/501 (41%), Gaps = 67/501 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPQVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDPI------VFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P+ + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC--- 222 A +F+L+AS K ++ Q + +Y + G+ +L+F G Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 223 ---------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW---NYMSDDSASTMYIP-- 268 F ++QL + QN + + Q + M + + + +P Sbjct: 246 GTLLRESERFSMEEQLV--ISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNR 303 Query: 269 -------------------LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 L+E E ++ V L V + ++G+SGG+DS L Sbjct: 304 TLDLTRAIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLA 363 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHF 362 + V DAL ++ + I +P T+ ++ +A ++LG + I + + HF Sbjct: 364 LLVTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACIQHF 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 424 KDIDHDIHVHD---VTYENSQARERTQLLMDVANQENGLVIGTGDLSELALGWATYNGDH 480 Query: 423 SGGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 481 MSMYGVNGSIPKTLVKYLVEW 501 >gi|189466424|ref|ZP_03015209.1| hypothetical protein BACINT_02799 [Bacteroides intestinalis DSM 17393] gi|189434688|gb|EDV03673.1| hypothetical protein BACINT_02799 [Bacteroides intestinalis DSM 17393] Length = 641 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 117/500 (23%), Positives = 202/500 (40%), Gaps = 64/500 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + A +G+ +I F EL ++GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNAGEIEKEIIIAEGKGVQIIAFPELCVTGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + S+T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIHIISNTRQLDIIAILGMPIAMNGVLLNAAVVIQKGKVLGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S R D GI ICED+W L QG Sbjct: 126 EKRWFTSAVDVSETSVRLCGQLVPMGANLLFEMADTTFGIEICEDLWAPIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ---------DELIFDG 218 AE LF+L+A K +++ Q + ++ + G+ + LI++ Sbjct: 186 AEILFNLSADNEGIGKHNYLRSLISQQSARCIAGYVFCSCGFGESTTDVVFAGNGLIYEN 245 Query: 219 AS-------FCFDGQ------------------QQLAFQMKHFSEQNFM---TEWHYDQQ 250 S F F+GQ A H + + + TE+ ++ Sbjct: 246 GSLIEYSKRFSFEGQVVIGEIDVEHLRIERRVNTTFAACRAHCAPEEAVRVSTEYVNSKE 305 Query: 251 LSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 L+ L E E ++ V L + ++G+SGG+DS L Sbjct: 306 LNLTRRFDPHPFVPQGTALNERCEEIFSIQVSGLAQRLVHTRAKSAVVGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + V D LG ++++ + +P T+ ++ +A +LG + I + + HF Sbjct: 366 LVCVKTFDKLGWSRKDIIGVTMPGFGTTDRTHTNAVDLMNSLGITVREVSIKEACIQHFK 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDINVHD---VVYENAQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 483 SMYGVNGSVPKTLVKHLVKW 502 >gi|170750148|ref|YP_001756408.1| NAD synthetase [Methylobacterium radiotolerans JCM 2831] gi|170656670|gb|ACB25725.1| NAD synthase [Methylobacterium radiotolerans JCM 2831] Length = 699 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 122/484 (25%), Positives = 199/484 (41%), Gaps = 77/484 (15%) Query: 37 GMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV 96 G L +FTEL +S Y EDL+ +++ + A +A + +++ + ++VG P + + V Sbjct: 65 GAALAVFTELGLSAYAIEDLLLQQTLLDAVEAAAARVIAESANLRPLLLVGAPLRWRHRV 124 Query: 97 LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS----NDPIVFRD---------- 142 N + + G ++ K LPNY EF+EKR F SG + RD Sbjct: 125 YNCALAIQGGRLLGAVPKTFLPNYREFYEKRHFASGAGIAGETVRVAGRDAPFGTDLLFP 184 Query: 143 ------IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQIS 196 + +G+ ICED+W GA L +L+ SP + + R + + + Sbjct: 185 AEDLPGLVVGVEICEDLWVPEPPGMRAALAGATVLANLSGSPITVGRAESR--ALLSRAA 242 Query: 197 HVHLPIIYVNQVGGQDELIFDGASFCFDGQQ---QLAFQM---KHFSEQNFMTEWHYDQQ 250 + YV GQ E D +DGQ +L ++ + F E+ T D Sbjct: 243 SMRGACAYVYAAAGQGESTTD---LSWDGQTSIDELGVRLAEGERFPEKPVTTLADIDLD 299 Query: 251 LSQWNYMS----DDSASTMYIPLQE-------EEAD------------------------ 275 L + DD A +P + EAD Sbjct: 300 LIAQERLQAGSFDDDARGHTLPYRRVPFRVGPPEADLGLIRRIERFPFVPADPSRLAQDC 359 Query: 276 ---YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLP 327 YN V L ++ K IIG+SGG+DS + A A D LG + ++ LP Sbjct: 360 YEAYNIQVAGLAKRLEATGTRKAIIGVSGGLDSTHALIVIAKAFDRLGYPRSDILAYTLP 419 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-FLQEEPS-GIVAENIQSR 385 TS + +A A KALGC + I + M+ F + E + EN+Q+ Sbjct: 420 GFATSNATKTNAHALMKALGCTAAEIDIRPAAKQMLADMNHPFAKGEAVYDVTFENVQAG 479 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWR 444 +R + L L+NH+ +++ T + SE+++G+ T GD + + KT + L W Sbjct: 480 LRTDYLFRLANHAGGIVVGTGDLSELALGWCTYGVGDQMSHYAVNAGVPKTLIQHLIRWV 539 Query: 445 NSHG 448 +G Sbjct: 540 IGNG 543 >gi|156742176|ref|YP_001432305.1| NAD synthetase [Roseiflexus castenholzii DSM 13941] gi|156233504|gb|ABU58287.1| NAD synthase [Roseiflexus castenholzii DSM 13941] Length = 692 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 128/547 (23%), Positives = 218/547 (39%), Gaps = 80/547 (14%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGG 81 N+A+ E A+ + LF EL +S Y +DL + + ++ +A++ L + Sbjct: 30 NVARTLALAERASATNAAVALFPELGLSAYTCDDLFQQDALLEGVLNALERLVDASRALT 89 Query: 82 AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--------- 132 ++VG P + G+ N V++ G I+ + K +PNY EF+EKR F + Sbjct: 90 PVLLVGAPLRIDSGLYNCAVVIYRGRILGIVPKSYIPNYREFYEKRQFSAARDAIRQTVR 149 Query: 133 YSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 + D + F L + ICED+W + GA L +L+AS Sbjct: 150 LAGDTVPFGADLIFTAENIPGFTLHVEICEDVWVPAPPSTFAALAGATILANLSASNITI 209 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R + Q +Y G+ +L +DG + ++ + LA + ++ Sbjct: 210 GKADYRRMLCAAQSGVCLAAYLYSAAGPGESTTDLAWDGHALIYELGELLAESERFARDE 269 Query: 240 NFMTE----WHYDQQLSQWNYMSDDSAS------------------TMYIPLQEEEAD-- 275 +T Q+ + +D S T +PLQ A Sbjct: 270 QIITADIDIERIVQERIRTTSFADSSGDHRERLRAMRRIPFTFETPTGDVPLQRTIARFP 329 Query: 276 ----------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDAL 316 Y+ V L + KV+IG+SGG+DS + AA +D L Sbjct: 330 YVPADPVRRDERCYEAYSIQVHGLMKRLVSTGIEKVVIGVSGGLDSTQALIVAARTMDRL 389 Query: 317 G--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLPIHDLVNHFFSLMSQFLQ 371 + N+ +P TS +L +A +ALG + D+ P + + F + Sbjct: 390 DLPRTNILAYTMPGFATSETTLTNARNLMRALGVSAGEIDIRP--SCMQMLRDIGHPFAR 447 Query: 372 EEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPL 429 EP + EN+Q+ R + L L+N A+++ T + SE+++G+ T GD +N Sbjct: 448 GEPVYDVTFENVQAGDRASHLFRLANMHGALVVGTGDLSELALGWATYGVGDHMSHYNVN 507 Query: 430 KDLYKTQVFQLASWRNSHG----ITSGL--GPLTEVIPPSILEKSPSAELRPHQTDQESL 483 KT + L W G TS + L+ I P ++ + RP Q+ Q + Sbjct: 508 ASAPKTLIQHLIRWVADSGQFDDATSAILRSILSTEISPELVPPDGADHSRPAQSTQAII 567 Query: 484 PPYPILD 490 PY + D Sbjct: 568 GPYELQD 574 >gi|126640908|ref|YP_001083892.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Acinetobacter baumannii ATCC 17978] gi|126386792|gb|ABO11290.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Acinetobacter baumannii ATCC 17978] Length = 132 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 12/135 (8%) Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ+ Sbjct: 1 MVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQD 53 Query: 482 SLPPYPILDDIIKRIVENEESFINND---QEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 SLP Y +LD I+ + EE D + ++ E V V L+ +EYKRRQ +G +I Sbjct: 54 SLPAYDVLDAILYAYI--EEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRI 111 Query: 539 TAKSFGRDRLYPISN 553 T+++F R+R YPI N Sbjct: 112 TSRAFSRERRYPIVN 126 >gi|53714469|ref|YP_100461.1| NAD synthetase [Bacteroides fragilis YCH46] gi|52217334|dbj|BAD49927.1| glutamine-dependent NAD+ synthetase [Bacteroides fragilis YCH46] Length = 641 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 122/551 (22%), Positives = 223/551 (40%), Gaps = 69/551 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLITIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + T ++G P V+N+ V++ G I+ V K LPNY EF+ Sbjct: 66 QAEMALIQILNSTRQLDIISILGMPVVVNSTVINAAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S + ++F + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSENSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWATVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHNYLCSLISQQSARCISGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE------------ 272 LA + EQ + E + ++ + +A+ P +E Sbjct: 246 GYLLARSERFCMEEQLIINEIDVECIRAERRVNTTFAANKANCPGKEAVRISTEFVNSKD 305 Query: 273 -----------------------EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E ++ + L + +IG+SGG+DS L Sbjct: 306 LNLTRTFNPHPFVPQGSELNSRCEEIFSIQIAGLAQRLLHTGARTAVIGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V D LG ++++ I +P T+ ++ +A +LG + I + F Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMNSLGVSIREISIREACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + L + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIGHDLNIHD--VTYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGI--TSGLGPLTEV---IPPSILEKSPSAELRPHQTD 479 + + KT V L W +G+ TS L V I P ++ + E++ Q Sbjct: 484 MYGVNAGIPKTLVKHLVQWVAENGMDETSKATLLDIVDTPISPELIPADENGEIK--QKT 541 Query: 480 QESLPPYPILD 490 ++ + PY + D Sbjct: 542 EDLVGPYELHD 552 >gi|296114620|ref|ZP_06833273.1| NAD synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978976|gb|EFG85701.1| NAD synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 681 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 127/567 (22%), Positives = 221/567 (38%), Gaps = 92/567 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D N+A+ + + G+ + +F EL + GY EDL + ++ Sbjct: 14 RVAACTLPVALADPQANVARTVQQAGACDADGVAVAVFPELGLCGYAIEDLRQQDVVLER 73 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ L + T +VVG P + N +++ G ++ V K LPNY EF+E Sbjct: 74 VDAAVAELAAATAGLLPVLVVGAPLCHGGELYNCAIVIHRGRVLGVVPKSYLPNYREFYE 133 Query: 126 KRTFISG----------------YSNDPIV----FRDIRLGILICEDIWKNSNICKHLKK 165 R F G + D + + LG+ ICED+W H Sbjct: 134 ARQFAPGAGVRDRHIRVGGQDAPFGTDLLFDAADVPGLTLGVEICEDMWVPQPPSTHAAL 193 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R + + +Y G+ +L +DG F Sbjct: 194 AGASVIANLSASDITVGKAQTRTLLCQAHTARCVCAYVYAAAGEGESTTDLAWDGQVSVF 253 Query: 224 DGQQQLA-------------------------FQMKHFSEQNF----------------- 241 + LA +M F + Sbjct: 254 ENGAVLARSARFPTGAVRAVADVDLDLLRQERMRMGTFGDNRRAAGGDGTWRRVGFVLDP 313 Query: 242 -MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL---SLRDYVQKNNFHKVII 297 M + + ++++ ++ D P Q E+ Y A + +L+ ++ + +++I Sbjct: 314 PMRDIGLRRDIARFPFVPSD-------PTQLEQDCYEAFAIQVSALKQRMRTSGARRMVI 366 Query: 298 GLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +AV A LG++ V +P T+ + +A A +ALG Sbjct: 367 GISGGLDSTHALLVAVRAADELGLGRDVVMAYTMPGFGTTAGTRSNALALMEALGVTAAE 426 Query: 353 LPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I M + + EN+Q+ +R + L L+N S +++ T + SE Sbjct: 427 IDIRPTARMMLEQMGHPFAGGAAVYDVTFENVQAGLRTDFLFRLANQSGGIVIGTGDLSE 486 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD +N L KT + L W S G T VI IL+ Sbjct: 487 LALGWCTYGVGDQMSHYNVNAGLPKTLIQHLIRWVMSSGAEDA---RTCVILRDILDTEI 543 Query: 470 SAEL------RPHQTDQESLPPYPILD 490 S EL P Q+ + + PY + D Sbjct: 544 SPELIPAHEGHPVQSTEARIGPYALQD 570 >gi|301163951|emb|CBW23506.1| putative glutamine-dependent NAD+ synthetase [Bacteroides fragilis 638R] Length = 641 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 122/551 (22%), Positives = 223/551 (40%), Gaps = 69/551 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLITIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + T ++G P V+N+ V++ G I+ V K LPNY EF+ Sbjct: 66 QAEMALIQILNSTRQLDIISILGMPVVVNSTVINAAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S + ++F + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSENSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWATVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHNYLCSLISQQSARCISGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE------------ 272 LA + EQ + E + ++ + +A+ P +E Sbjct: 246 GYLLARSERFCMEEQLIINEIDVECIRAERRVNTTIAANKANCPGKEAVRISTEFVNSKD 305 Query: 273 -----------------------EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E ++ + L + +IG+SGG+DS L Sbjct: 306 LNLTRTFNPHPFVPQGSELNSRCEEIFSIQIAGLAQRLLHTGAKTAVIGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V D LG ++++ I +P T+ ++ +A +LG + I + F Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMNSLGVSIREISIREACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + L + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIGHDLNIHD--VTYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGI--TSGLGPLTEV---IPPSILEKSPSAELRPHQTD 479 + + KT V L W +G+ TS L V I P ++ + E++ Q Sbjct: 484 MYGVNAGIPKTLVKHLVQWVAENGMDETSKATLLDIVDTPISPELIPADENGEIK--QKT 541 Query: 480 QESLPPYPILD 490 ++ + PY + D Sbjct: 542 EDLVGPYELHD 552 >gi|55379147|ref|YP_136997.1| NAD synthetase [Haloarcula marismortui ATCC 43049] gi|55231872|gb|AAV47291.1| NH(3)-dependent NAD(+) synthetase [Haloarcula marismortui ATCC 43049] Length = 277 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 19/209 (9%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK-A 345 V V++GLSGGIDS L + +AV+ALG++ V +++P + ++ DA A Sbjct: 38 VDAAGVDTVVMGLSGGIDSTLVSHLAVEALGRDAVHGLVMPSEVNRADNMSDAERVANDL 97 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG +YDV+ I+ LV+ F + + E + N++ R R + + NH +A++L T Sbjct: 98 LGIEYDVIEINPLVDTF---LDAYPDAEGDQLAVGNLRVRCRAVLNYLVGNHEQALVLGT 154 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 N+SE VGY T YGD + +P+ LYK QV QLA +P + Sbjct: 155 GNRSEALVGYYTKYGDGAVDCHPIAALYKQQVRQLAKHVG--------------VPDDLA 200 Query: 466 EKSPSAELRPHQTDQESLP-PYPILDDII 493 EK+ SAE+ QTD + + Y LD I+ Sbjct: 201 EKTASAEMWAGQTDADEMGMDYDTLDSIL 229 >gi|253564970|ref|ZP_04842426.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_2_5] gi|265766074|ref|ZP_06094115.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 2_1_16] gi|251946435|gb|EES86812.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_2_5] gi|263253742|gb|EEZ25207.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 2_1_16] Length = 641 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 119/551 (21%), Positives = 221/551 (40%), Gaps = 69/551 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLITIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + T ++G P V+N+ V++ G I+ V K LPNY EF+ Sbjct: 66 QAEMALIQILNSTRQLDIISILGMPVVVNSTVINAAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S + ++F + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSENSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWATVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHNYLCSLISQQSARCISGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE------------ 272 LA + EQ + E + ++ + +A+ P +E Sbjct: 246 GYLLARSERFCLEEQLIINEIDVECIRAERRVNTTFAANKANCPGKEAIRISTEFVNSKD 305 Query: 273 -----------------------EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E ++ + L + +IG+SGG+DS L Sbjct: 306 LNLTRTFNPHPFVPQGSELNSRCEEIFSIQIAGLAQRLLHTGAKTAVIGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V D LG ++++ I +P T+ ++ +A +LG + I + F Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMNSLGVSIREISIREACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + L + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIGHDLNIHD--VTYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEVIPPSILEKSPSAELRPHQTD 479 + + KT V L W +G+ L + I P ++ + E++ Q Sbjct: 484 MYGVNAGIPKTLVKHLVQWVAENGMDEASKATLLDIVDTPISPELIPADENGEIK--QKT 541 Query: 480 QESLPPYPILD 490 ++ + PY + D Sbjct: 542 EDLVGPYELHD 552 >gi|222478529|ref|YP_002564766.1| NAD+ synthetase [Halorubrum lacusprofundi ATCC 49239] gi|222451431|gb|ACM55696.1| NAD+ synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 277 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 20/284 (7%) Query: 253 QWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 Q +SDD + + +E E V + D V ++GLSGGIDS L A +A Sbjct: 7 QSVLLSDDPPLDLRLSEEELENARERIVSFIADLVDDAGSEGAVLGLSGGIDSTLTAHLA 66 Query: 313 VDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 V+ALG++ + I +P + P + DA A LG +YDV+ I + F F + Sbjct: 67 VEALGEDGLHGITMPAEVNDPDVMSDAERVAHDLGIEYDVVEIQPIAESVF---DAFPEA 123 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 + A N+ R R + ++N ++L T N++E GY T YGD + NP+ +L Sbjct: 124 ADDRMAAGNVYVRTRAVLNYFVANAENRIVLGTGNRAEAMTGYFTKYGDQAVDCNPIGNL 183 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDD 491 YK QV QLA+ +P ++ + P+A + QTD + Y +D Sbjct: 184 YKQQVRQLAAHVG--------------VPRDLVMQEPTAGMWEGQTDAAEMGLDYDTVDA 229 Query: 492 IIKRIVENEESFINNDQEYN--DETVRYVEHLLYGSEYKRRQAP 533 I+ V+ S +E + +E V V L+ S +KR P Sbjct: 230 ILAVHVDGGLSRAATVRELDVPEEAVDRVVELVERSAHKRSMPP 273 >gi|288802172|ref|ZP_06407612.1| glutamine-dependent NAD+ synthetase [Prevotella melaninogenica D18] gi|288335139|gb|EFC73574.1| glutamine-dependent NAD+ synthetase [Prevotella melaninogenica D18] Length = 641 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 122/479 (25%), Positives = 200/479 (41%), Gaps = 75/479 (15%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V D N+ + + A QG+++I+F EL I+GY +DL ++ + A+ L Sbjct: 3 VADTKFNLIETEKQIAIAEGQGVEIIVFPELSITGYTCQDLFQQQLLLDDTEQAVIELLE 62 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 T ++VG P +LN +++ G ++ + K LPNYSEF+EKR F S Sbjct: 63 FTRQLDITVIVGAPVAVGALLLNCALVIQQGKLLGIVAKTFLPNYSEFYEKRWFASSQDL 122 Query: 136 DPIVFR----DIRL---------------GILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P R +IR+ I ICED+W + HL GAE +F+L+ Sbjct: 123 RPQHIRFAGNNIRVTPELQIFRTSEGATFAIEICEDVWAPTPPSNHLALAGAEIIFNLST 182 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG----QQQLA 230 S K ++ Q + +Y + G+ +++F G + F+ +Q Sbjct: 183 SDELIGKHAYLKSLLAQQSARTISGYVYSSSGFGESTQDVVFGGNALIFENGSLVKQSER 242 Query: 231 FQMK------HFSEQNFMTE-----------------------------WHYDQQ--LSQ 253 FQ++ +N +E H D Q L+ Sbjct: 243 FQLEPQLVISEIDIENLRSERRTNSTFVNAQRPVASGLAGITGQIGELALHVDCQPPLNP 302 Query: 254 WNY-MSDDSASTMYIPLQE---EEAD--YNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + ++ + +IP E E D YN V L + N IIG+SGG+DS L Sbjct: 303 REFTLTREFDQHPFIPKSENMQEACDEIYNIQVSGLAKRLVHTNCKSAIIGISGGLDSTL 362 Query: 308 CAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V D LG ++ + + +P T+ ++ ++A A + LG + I V Sbjct: 363 ALLVVVKTFDKLGLDRKGIVGVTMPGFGTTGRTYKNAMALMERLGITIREIDIKASVLQH 422 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + E EN Q+R R ILM LSN +++ T + SE+++G+ T GD Sbjct: 423 FEDIDH--DPEVHDSTYENAQARERTQILMDLSNQMNGLVIGTGDLSELALGWCTYNGD 479 >gi|60682492|ref|YP_212636.1| NAD synthetase [Bacteroides fragilis NCTC 9343] gi|60493926|emb|CAH08717.1| putative glutamine-dependent NAD+ synthetase [Bacteroides fragilis NCTC 9343] Length = 641 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 122/551 (22%), Positives = 223/551 (40%), Gaps = 69/551 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLITIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + T ++G P V+N+ V++ G I+ V K LPNY EF+ Sbjct: 66 QAEMALIQILNSTRQLDIISILGMPVVVNSTVINAAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS---------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S + ++F + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSENSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWATVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHNYLCSLISQQSARCISGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE------------ 272 LA + EQ + E + ++ + +A+ P +E Sbjct: 246 GYLLARSERFCMEEQLIINEIDVECIRAERRVNTTFAANKANCPGKEAVRISTEFVNSKD 305 Query: 273 -----------------------EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E ++ + L + +IG+SGG+DS L Sbjct: 306 LNLTRTFNPHPFVPQGNELNSRCEEIFSIQIAGLAQRLLHTGAKTAVIGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V D LG ++++ I +P T+ ++ +A +LG + I + F Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMNSLGVSIREISIREACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + L + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIGHDLNIHD--VTYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGI--TSGLGPLTEV---IPPSILEKSPSAELRPHQTD 479 + + KT V L W +G+ TS L V I P ++ + E++ Q Sbjct: 484 MYGVNAGIPKTLVKHLVQWVAENGMDETSKATLLDIVDTPISPELIPADENGEIK--QKT 541 Query: 480 QESLPPYPILD 490 ++ + PY + D Sbjct: 542 EDLVGPYELHD 552 >gi|309775951|ref|ZP_07670943.1| putative NAD synthase [Erysipelotrichaceae bacterium 3_1_53] gi|308916233|gb|EFP61981.1| putative NAD synthase [Erysipelotrichaceae bacterium 3_1_53] Length = 549 Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 125/494 (25%), Positives = 214/494 (43%), Gaps = 73/494 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ ++ G N++ ++ + A DLI+F + +SGY D + + + Sbjct: 1 MKVAVVTMHVRQGKCEENVSYMKQMIQRAREAQADLIVFPQNAVSGYRLGDQWMDEDWCR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S D L +++ D IV G R N+ +R K N P +++ Sbjct: 61 YVDSFNDVLVAESED--IAIVWGNIRYRNRRRFNAA-FFAYQRQTHMRVKRNTP-FTD-- 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 + R F N I ++D + +I Q + +L+A+ + Sbjct: 115 DARYFEENPINSAIEYKDHVFALNFGREI------------QLTDININLDAAMF----- 157 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 Q + +IY N VG G++ +I G S ++ + +Q F E+ Sbjct: 158 ------TLDQDVSLKGNVIYANAVGMQNSGKEVVIMQGGSGVRIAKKTI-YQADWFQEEM 210 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV--IIG 298 + E +S+ + P Q + D A ++ +RD+ + +V I+G Sbjct: 211 HIVE------------LSETKEAR---PSQPKLLD--ALLMGIRDFDSQVFGGRVPWIVG 253 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGG+DS++ AA+ ALGKE V + ++ S ++ +AA A+ALG Y + L Sbjct: 254 MSGGLDSSVTAALLCAALGKERVYGYNIATQHNSSTTISNAAKEAQALGIHYKEGNMKSL 313 Query: 359 VNHFFSLMSQ---FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + L+ Q + EE +V EN+Q+R RG +L + +++ NK E ++GY Sbjct: 314 IQASAELLRQEYGYDVEEMPSLVMENLQARSRGYLLSGFAGILGGVVVNNGNKVETALGY 373 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL---------- 465 TLYGD G + + DL K Q+F L S + G EVIP ++L Sbjct: 374 CTLYGDSIGALSVIGDLTKVQLFDL-----SAALNDRFGK--EVIPCNLLPRVHEQGIDW 426 Query: 466 EKSPSAELRPHQTD 479 E PSAEL+ Q D Sbjct: 427 EMPPSAELKDAQLD 440 >gi|217031556|ref|ZP_03437061.1| hypothetical protein HPB128_21g114 [Helicobacter pylori B128] gi|216946756|gb|EEC25352.1| hypothetical protein HPB128_21g114 [Helicobacter pylori B128] Length = 249 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 28/217 (12%) Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 R Y +K +F KV+ GLSGG+DSA+ + KEN +++P + P+S DA Sbjct: 7 RSY-KKKDFKKVVYGLSGGLDSAVVGVLCQKVF-KENAHALLMPSSVSMPESKTDALNLC 64 Query: 344 KALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 + +Y + P + F ++ S N +R+R L S S + Sbjct: 65 ETFSIPYTEYSIAPYDKIFGSHF--------KDASLTRKGNFCARLRMAFLYDYSLKSDS 116 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +++ TSNKSE +GYGTL+GD++ NP+ +L+KT+V++LA N I Sbjct: 117 LVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLN--------------I 162 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 P IL K PSA+L Q+D++ L PY ++D ++K I Sbjct: 163 PKKILNKPPSADLFVGQSDEQDLGYPYSMIDPLLKDI 199 >gi|260201566|ref|ZP_05769057.1| NAD synthetase [Mycobacterium tuberculosis T46] gi|289443964|ref|ZP_06433708.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T46] gi|289416883|gb|EFD14123.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T46] Length = 553 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 109/486 (22%), Positives = 198/486 (40%), Gaps = 73/486 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 71 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 130 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 131 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 190 Query: 125 EKRTFISGYSNDPIV---FRDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G + D+ G + ICED++ Sbjct: 191 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 250 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 251 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 310 Query: 224 DGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 + LA +M F + N + + ++ Sbjct: 311 ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTF-DDNRRHHRELTESFRRIDFAL 369 Query: 259 DDSASTM----------YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D A + ++P LQ++ EA YN V L ++ ++ KV+IG+SG Sbjct: 370 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEA-YNIQVSGLEQRLRALDYPKVVIGVSG 428 Query: 302 GIDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ +E ++ LP T + +A A+ALG + + I Sbjct: 429 GLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIG 488 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + E+ + EN+Q+ +R + L+ + N ++L T + SE ++G Sbjct: 489 DTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLLRIPNQRGGIVLGTGDLSEKALG 548 Query: 415 YGTLYG 420 + T YG Sbjct: 549 WST-YG 553 >gi|304313871|ref|YP_003849018.1| NAD synthetase [Methanothermobacter marburgensis str. Marburg] gi|302587330|gb|ADL57705.1| predicted NAD synthetase [Methanothermobacter marburgensis str. Marburg] Length = 261 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 126/251 (50%), Gaps = 21/251 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++ V + V++GLSGG+DS+ A +A DALG + V I++P T P+ L+ A Sbjct: 19 IKARVDDSRTDGVVLGLSGGVDSSTVAYLAADALGPDRVLGIIMPSATTPPEDLKHAELV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ G +Y+ + I ++ F S S I N++ R R +L +N ++ Sbjct: 79 AEETGIEYETVDIEPILESF----SGICGHRASKIALANLKPRARMMVLYYHANSMNRLV 134 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 T N++E+ VGY T YGD P+ LYK QV LA LG +P Sbjct: 135 AGTGNRTELLVGYFTKYGDGGVDILPIGCLYKKQVRMLAEE---------LG-----VPS 180 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESF--INNDQEYNDETVRYVE 519 I+ K+PSA L P QTD+E L Y +LD+I+ +V+ + + ++ E V+ ++ Sbjct: 181 EIISKAPSAGLWPGQTDEEELGISYDVLDEILFLLVDKKMGVPEVASELGVPVEEVKRIQ 240 Query: 520 HLLYGSEYKRR 530 ++ + +K R Sbjct: 241 GMINAAGHKLR 251 >gi|301308821|ref|ZP_07214773.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 20_3] gi|300833345|gb|EFK63963.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 20_3] Length = 640 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 114/501 (22%), Positives = 208/501 (41%), Gaps = 67/501 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPQVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRSEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDPI------VFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P+ + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC--- 222 A +F+L+AS K ++ Q + +Y + G+ +L+F G Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 223 ---------FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW---NYMSDDSASTMYIP-- 268 F ++QL + QN + + Q + M + + + +P Sbjct: 246 GTLLRESERFSMEEQLV--ISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNR 303 Query: 269 -------------------LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 L+E E ++ V L V + ++G+SGG+DS L Sbjct: 304 TLDLTRAIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLA 363 Query: 309 AAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHF 362 + V DAL ++ + I +P T+ ++ +A ++LG + I + + HF Sbjct: 364 LLVTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACIQHF 423 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 424 KDINHDIHVHD---VTYENSQARERTQLLMDVANQANGLVIGTGDLSELALGWATYNGDH 480 Query: 423 SGGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 481 MSMYGVNGSIPKTLVKYLVEW 501 >gi|84497435|ref|ZP_00996257.1| NAD(+) synthetase [Janibacter sp. HTCC2649] gi|84382323|gb|EAP98205.1| NAD(+) synthetase [Janibacter sp. HTCC2649] Length = 690 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 133/575 (23%), Positives = 222/575 (38%), Gaps = 97/575 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D A N A + G+ + LF EL +SGY +DL + ++ Sbjct: 13 RVAACTLPVTMADPAKNAAATIEQVRALHEDGVAVALFPELGLSGYAIDDLFMQDVLLEE 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI + T +VVG P + N V++ G +I V K LPNY EF+E Sbjct: 73 VDRAIVAVAEATAKLTPIVVVGAPLLIGNRLYNCAVVIQGGEVIGVAPKSYLPNYREFYE 132 Query: 126 KRTFISG-YSNDPIVFR----------DIRLG----------------ILICEDIWKNSN 158 KR F G + D ++ R DI G + ICED+W Sbjct: 133 KRWFAPGDDAVDTLINRPHWPGADEDGDIAYGTDLLFEATDVPGLVVHVEICEDMWVPVP 192 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA L +L+ASP + RH + + + +Y G+ +L + Sbjct: 193 PSHRAALAGATVLLNLSASPITVGRADDRHLLARSASARCNAAYLYAAASEGESSTDLSW 252 Query: 217 DGASFC--------------------------------------FDGQQQL--------- 229 DG + FD +++ Sbjct: 253 DGMTMVYEMGDLLGESERFPSGPQATVVDVDLDRLRQERIRQGSFDDNRRVEGIGEPGGE 312 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 +F++ F + +++ ++ ++ DD A Q+ YN V L ++ Sbjct: 313 SFRVVAFELDPPTGDIGLRRKVDRFPFVPDDEARLA----QDCYEAYNIQVSGLEQRLRA 368 Query: 290 NNFHKVIIGLSGGIDSA---LCAAIAVDALGKENVQTI--MLPYKYTSPQSLEDAAACAK 344 K++IG+SGG+DS + AA A+D L + I +P TS + +A + Sbjct: 369 IGQPKIVIGVSGGLDSTHALIVAAKAMDRLRRPRTDIIGFTMPGFATSDGTKSNAIHLME 428 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 +LG ++ L I + EE + EN+Q+ +R + L +N ++ Sbjct: 429 SLGITFETLDIKPAATQMLKDLGHPAGNGEEVYDVTFENVQAGLRTDYLFRAANQRGGIV 488 Query: 403 LTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 L T + SE+++G+ T GD + + KT + L W S G T V Sbjct: 489 LGTGDLSELALGWCTYGVGDQMSHYGVNTGVPKTLMQHLIRWVVSSKQFEGGVNETLV-- 546 Query: 462 PSILEKSPSAELRPH------QTDQESLPPYPILD 490 IL++ S EL P Q+ ++S+ PY + D Sbjct: 547 -EILDQEISPELVPTKKGEKIQSTEDSVGPYSLQD 580 >gi|254819841|ref|ZP_05224842.1| NAD synthetase [Mycobacterium intracellulare ATCC 13950] Length = 680 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 130/567 (22%), Positives = 231/567 (40%), Gaps = 92/567 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V+GD A N R E + G+ L +F EL +SGY ED+V + + Sbjct: 13 RVAACTHHTVIGDPAANAEAVLRMARECHDDGVALAVFPELTLSGYSIEDIVLQDLLLDD 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ + + + + +VVG P + + + N+ V++ G ++ V K LP Y EF+E Sbjct: 73 VDRAVADIVAASAELLPVLVVGAPVRHRHRIYNAAVVIHRGEVLGVAPKSYLPTYREFYE 132 Query: 126 KRTFISG---------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLKK 165 +R G + D ++F + L + ICED++ Sbjct: 133 RRQIAPGDDERGTIRLAGVEAPFGPD-LLFAASDVPGLVLHVEICEDMFVPIPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + S +Y G+ +L +DG + F Sbjct: 192 AGATVLANLSGSPITIGRAEDRCLLARSASSRCLAAYVYSAAGAGESTTDLAWDGQTMVF 251 Query: 224 DGQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMS--DD-------SASTM-------- 265 + LA + E+ + + + S+ M DD +A + Sbjct: 252 ENGVLLAMSERFPLGERRSVADVDLELLRSERLRMGTFDDNRRHHRTTAESFRRIEFRLD 311 Query: 266 ----------------YIPL--QEEEAD----YNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++P Q E D YN V L ++ +F K++IG+SGG+ Sbjct: 312 PPGGDIGLWREIERFPFVPADPQRLEQDCFEGYNIQVAGLEQRLRALDFPKIVIGISGGL 371 Query: 304 DSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS +A A+ +E ++ LP T ++ +A +ALG + + I + Sbjct: 372 DSTHALIVAARAMDREQRPRSDILAFTLPGFATGDRTKRNAIELCRALGVTFAEIDIRET 431 Query: 359 -------VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 ++H FS E+ + EN+Q+ +R + L L+N ++L T + SE+ Sbjct: 432 AQLMLKEIDHPFS-----RGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSEL 486 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWR-NSHGITSGLGPL------TEVIPPS 463 +G+ T GD +N + KT + L W +S S + + TE+ P Sbjct: 487 GLGWSTYGVGDQMSHYNVNGGVPKTLIQHLIRWVISSQQFESKVSEVLQSVLDTEITP-- 544 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILD 490 E PS E Q+ + + P+ + D Sbjct: 545 --ELVPSGEEEELQSSEAKVGPFALQD 569 >gi|305663343|ref|YP_003859631.1| NH(3)-dependent NAD(+) synthetase [Ignisphaera aggregans DSM 17230] gi|304377912|gb|ADM27751.1| NH(3)-dependent NAD(+) synthetase [Ignisphaera aggregans DSM 17230] Length = 275 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 18/267 (6%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD V + V+IG+SGG+DS + + +AV ALG+ENV +++P +YT + ++DA Sbjct: 26 IRDNVLGASAKGVVIGVSGGLDSTVTSILAVKALGRENVLGVIMPSRYTPREDIDDALYI 85 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 +LG +Y + I +++ + + F + + + N+ RIR IL +N ++ Sbjct: 86 VNSLGIRYLYIDIDPILDSYIKNLPGF--DHSNRLATGNLMPRIRMAILYYYANLYNYLV 143 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T +KSEI +GY T YGD P+ DLYK QV +LA I Sbjct: 144 LGTGDKSEILLGYFTKYGDGGVDLLPIGDLYKVQVRRLAEIMGFEKIA------------ 191 Query: 463 SILEKSPSAELRP-HQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 K S L P H+ ++E Y +D I+ + + Q + + V V Sbjct: 192 ---RKPSSPRLWPGHRVEEELGASYEEIDPILYALFDLRIPIEKAYQIFRRDLVDMVIRR 248 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRL 548 SE+KRR P+ +AK R+ L Sbjct: 249 YRQSEHKRRTPPIADLSSAKKMVREAL 275 >gi|229815583|ref|ZP_04445910.1| hypothetical protein COLINT_02634 [Collinsella intestinalis DSM 13280] gi|229808813|gb|EEP44588.1| hypothetical protein COLINT_02634 [Collinsella intestinalis DSM 13280] Length = 699 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 110/240 (45%), Gaps = 26/240 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA A VGD+AGN A + A R G ++ EL ++GY DL ++ ++ Sbjct: 21 LRIAAATPKIRVGDVAGNAAAILECVDAAVRAGARVLALPELCLTGYTCGDLFHDRALLR 80 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A SA+ L DT D VG P +E V N V AG ++ + K +LPNY EF+ Sbjct: 81 AAESALSGLLEDTSDTPLLFTVGLPVAHRENVYNCVAACCAGRLLGLTVKRHLPNYGEFY 140 Query: 125 EKRTF------------ISGYSNDPIV-----------FRDIRLGILICEDIW-KNSNIC 160 E+R F +G + P++ D+R+G+ +CED+W N Sbjct: 141 EQRWFAPAPVNGSGFIPFAGQDSVPLMGGIVYTCSDPGLEDVRIGVEVCEDLWVPNPPSV 200 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 GA + + +AS K R +V+GQ + ++ Y N G+ +L+F G Sbjct: 201 DMALSGGATVILNASASSEILGKSAYRRSLVSGQSARLYCAYAYANAGEGESTTDLVFSG 260 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 18/218 (8%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIM 325 EE D A L R + H +IGLSGG+DS L + V A L + V + Sbjct: 379 EEILDLQAAGLKTR--LAHTGTHSAVIGLSGGLDSTLALLVTVRAFDMLGLPRTGVHAVS 436 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQ 383 +P T+ ++ +A A+ LG + + I + V F+ + +PS + EN Q Sbjct: 437 MPGFGTTGRTKSNAERLAEQLGVDFRTIAIGEAVRAHFTDIGH----DPSVTDVTYENAQ 492 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R R +LM LSN ++ T + SE+++G+ T D + + KT V L Sbjct: 493 ARERTQVLMDLSNELGGFVIGTGDLSELALGWATYNADHMSMYGVNAGVPKTLVRHLV-- 550 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 SH S LG T I IL+ S EL P D E Sbjct: 551 --SHAADS-LGGETAAILRDILDTPVSPELLPPTGDGE 585 >gi|148656798|ref|YP_001277003.1| NAD synthetase [Roseiflexus sp. RS-1] gi|148568908|gb|ABQ91053.1| NAD+ synthase [Roseiflexus sp. RS-1] Length = 686 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 133/565 (23%), Positives = 224/565 (39%), Gaps = 82/565 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ + V D A N+ + E A+ + LF EL +S Y +DL + + ++ Sbjct: 13 VRVAVCIPSLRVADPAYNVTRTIGLAERASVANAAVALFPELGLSAYTCDDLFQQDALLE 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A++ L + ++VG P + + N +++ G I+ V K +PNY EF+ Sbjct: 73 GVLDALNRLIDASRSLTPVLLVGAPLRIDGALYNCAIVIYHGRILGVVPKSYIPNYREFY 132 Query: 125 EKRTFISG----------------YSNDPIVFRD----IRLGILICEDIWKNSNICKHLK 164 EKR F + + ND I L ICED+W + Sbjct: 133 EKRQFSAARDALRQTITLAGATVPFGNDLIFVAGNVPGFALHAEICEDVWVPAPPSSFAA 192 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K R + Q +Y G+ +L +DG + Sbjct: 193 LAGATILANLSASNITIGKADYRRMLCAAQSGTCIAAYLYSAAGPGESTTDLAWDGHALI 252 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD-----QQLSQWNYMSD------DSASTM------ 265 ++ + LA + F++ M D Q+ + +D + TM Sbjct: 253 YELGELLA-ETGRFADDERMITADIDLERIVQERMRTTSFADAIGDHRERLRTMRHIPFT 311 Query: 266 ------------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSG 301 Y+P D YN V L + KV+IG+SG Sbjct: 312 FDIPEGDVPLQRIIDRFPYVPGDPSRRDERCYEAYNIQVHGLMKRLISTGIEKVVIGVSG 371 Query: 302 GIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVL 353 G+DS + AA +D L + N+ +P TS +L +A + ALG + D+ Sbjct: 372 GLDSTHALIVAARTMDRLNLPRTNILAYTMPGFATSEITLANARSLMHALGVTAGEIDIR 431 Query: 354 PIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 P + + F + EP + EN+Q+ R + L L+N A+++ T + SE++ Sbjct: 432 P--SCMQMLRDIGHPFARGEPVYDVTFENVQAGDRTSHLFRLANMHGALVVGTGDLSELA 489 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHG----ITSGL--GPLTEVIPPSIL 465 +G+ T GD +N KT + L W G TS + L+ I P ++ Sbjct: 490 LGWATYGVGDHMSHYNVNASAPKTLIQHLIRWVADSGQFDDATSAILRSILSTEISPELI 549 Query: 466 EKSPSAELRPHQTDQESLPPYPILD 490 + RP Q+ Q + PY + D Sbjct: 550 PPGDADHSRPAQSTQAIIGPYELQD 574 >gi|269929369|ref|YP_003321690.1| NAD+ synthetase [Sphaerobacter thermophilus DSM 20745] gi|269788726|gb|ACZ40868.1| NAD+ synthetase [Sphaerobacter thermophilus DSM 20745] Length = 247 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 128/256 (50%), Gaps = 33/256 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V + ++GLSGGIDSA+ A +A ALG E V +LP +++PQ +E A Sbjct: 11 IKEQVAQAGVQGGVVGLSGGIDSAVVAGLATRALGPERVTAAILP-AHSNPQDVEHAKLA 69 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG--IVAENIQSRIRGNILMALSNHSKA 400 A A G + V+ DL + + ++ + L P G + NI+ R+R L L+N A Sbjct: 70 AAAFGLEPLVI---DL-SRAYDVLRETL---PPGSEMADANIKPRLRMIALYHLANTRNA 122 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV- 459 +++ T NKSE VGY T YGD P+ LYK QV LA E+ Sbjct: 123 LVIGTGNKSEEMVGYFTKYGDGGVDILPIGGLYKHQVVALAR---------------EIG 167 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYV 518 +P I+ K PSA L QTD++ + Y LD I+ I + + D+ V V Sbjct: 168 VPEPIITKPPSAGLWAGQTDEQEMGITYDELDAILAAIERGDTTGFPPDR------VARV 221 Query: 519 EHLLYGSEYKRRQAPV 534 E ++ SE+KRR P+ Sbjct: 222 ERMIATSEHKRRLPPI 237 >gi|283768863|ref|ZP_06341774.1| NAD+ synthetase [Bulleidia extructa W1219] gi|283104649|gb|EFC06022.1| NAD+ synthetase [Bulleidia extructa W1219] Length = 642 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 135/569 (23%), Positives = 237/569 (41%), Gaps = 89/569 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A L V+G++ N+ + +++ E + + +++F EL ++GY DL ++ S +Q Sbjct: 6 IKVASVSLETVLGNVMENVIQIKQSLAETDAK---IVVFPELSLTGYSLGDLFYQDSLLQ 62 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + LKS + +VVG P + + N+ V + G V K LPNY EF Sbjct: 63 EVVNGLQELKSVSRGYPHQLVVVGAPLVQKNRLYNTAVFIQNGQYRLVVPKSFLPNYHEF 122 Query: 124 HEKRTFISGYSND-----------------PIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 +E R F SG D + + DI++G ICED+W + L Sbjct: 123 YEGRWFDSGRWIDWDLIQIGKEEVAFGTKYLLAYEDIKIGCEICEDLWVTNRPSNALVDN 182 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG----AS 220 GA + +L+AS K + R +V Q + + IY + G+ +L+F G AS Sbjct: 183 GANVVVNLSASNEIIGKEEYRRNLVLQQSAVGNCAYIYASSGLGESSTDLVFSGHCIIAS 242 Query: 221 FCFDGQQQL---------------AFQMKHFSEQNF--------------MTEWHYDQQL 251 ++ + Q S+ F TE ++ + Sbjct: 243 LGHLLKESIWPTKRTILEGIVDIEQIQASRRSQNTFDNKRIYRSIPVDFKQTEQTVEELV 302 Query: 252 S--QWNYMSDDSASTMYIPLQEEEADYNACV-LSLRDYVQK---NNFHKVIIGLSGGIDS 305 S + N+ D + L+E A +A + + R Q+ +IG+SGG+DS Sbjct: 303 SFLRENHYEIDPLPFVPTELEERLARSHAILQIQSRGLYQRYRSTGLKTAVIGISGGLDS 362 Query: 306 ALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L A + + K + M T+ + ++A A AL + +PI +V Sbjct: 363 TL-ALLVLHETKKLYPDLRIIGVTMPSAGNTTNDTYQNALALMNALSIEIREIPIQAMVQ 421 Query: 361 HFFSLMSQFLQEEPSG------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + P G EN Q+R+R +LM ++N +++ T + SE+++G Sbjct: 422 EHLKAIGH-----PDGYQGKKDTTYENAQARMRTYLLMDIANQENGLVIGTGDLSELALG 476 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT V L S+ + S LT+V+ I+ S EL Sbjct: 477 WCTYNGDHMSMYGVNSSIPKTLVKYLCE---SYALESENKALTDVL-YKIVNTPISPELT 532 Query: 475 PH------QTDQESLPPYPILDDIIKRIV 497 P+ Q +E++ Y + D + I+ Sbjct: 533 PNKDGEIVQKTEETIGKYDLNDFFLYHII 561 >gi|159900802|ref|YP_001547049.1| NAD+ synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159893841|gb|ABX06921.1| NAD+ synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 622 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 82/281 (29%), Positives = 133/281 (47%), Gaps = 22/281 (7%) Query: 273 EADYNACVLSLRDYVQ-KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 E N V LRD V + F +V+IGLSGG+DSAL + A G ENV + +PY+ + Sbjct: 360 ELTINWLVEFLRDEVGFRRGFKQVVIGLSGGVDSALTTYLCAKAFGAENVLAVRMPYRTS 419 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 S SL+ A LG ++ + I + V + S + + G N+ +R R +L Sbjct: 420 SSDSLDHAQLVIDDLGIQHRTIEITNAVEGYLS-----FEPDADGRRRGNVMARTRMIVL 474 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 S + + T NK+E GY T + D + NPL DL+KTQV++LA S Sbjct: 475 FDQSQKLGCIPIGTGNKTERLFGYYTWHADDAPPVNPLGDLFKTQVWELA---------S 525 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 +G +P I+ K SA+L QTD++ Y D ++ ++ + + Sbjct: 526 AIG-----VPDVIVHKPASADLVVGQTDEDDFGISYRKADRVLAYLLSGYRPEQLVARGF 580 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPI 551 N + V V+ + + +K R P +++ + G+ L P+ Sbjct: 581 NPDEVAIVQRRVNSTHWK-RHLPSTAMLSSTAIGKYYLRPV 620 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 17/186 (9%) Query: 7 IAIAQLNPVVGDIAGNIAKARR--AREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +A+AQ P G A N+A+ A+ + D+++ E ++GY E V ++ + Sbjct: 4 LALAQFRPRKGHYAANLARLGEIFAQLGTTERQPDVLMLPETALTGYFLEGGV-REQAVT 62 Query: 65 ACSSAIDTLKSDTHDGGAG-----IVVGFPRQDQEGVLNSVVILDAGN------IIAVRD 113 A D ++ GA IV+GF + +E NS + G+ I V Sbjct: 63 AGQLFHDLQQTYVAARGADAPALDIVIGFYERWRERFYNSALYATIGSDQSLAGIRHVHR 122 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-SNICKHLKKQGAEFLF 172 K+ LP Y F E R +G R R+ ILICED W + S L GA+ L+ Sbjct: 123 KMFLPTYGVFDEARFVEAGRQIAAFDTRFGRVAILICEDAWHSLSGTVAAL--DGAQMLY 180 Query: 173 SLNASP 178 ++ASP Sbjct: 181 VVSASP 186 >gi|288962052|ref|YP_003452362.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] gi|288914332|dbj|BAI75818.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] Length = 681 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 128/532 (24%), Positives = 210/532 (39%), Gaps = 93/532 (17%) Query: 42 LFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVV 101 LF EL +SGY +DL+ + I A A+ L + ++VG P + N+ V Sbjct: 49 LFPELALSGYAIDDLLMQDPLIDAVEQALLDLVQASAGLMPLLLVGAPLLHDGRLYNTAV 108 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGIL------------- 148 + G ++ V K +LPNY EF+E+R F SG + IR+G L Sbjct: 109 AIHRGELLGVVPKQHLPNYREFYERRQFASGAGTEGGT---IRIGDLTAPFGPDLLFSAE 165 Query: 149 ----------ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHV 198 ICED+W + GA L +L+AS K R + Q + Sbjct: 166 DQPGLVVHAEICEDLWVPAPPSTMAALAGATILANLSASNITIGKADTRRLLAKSQSARC 225 Query: 199 HLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD------QQ 250 +Y + G+ +L +DG + F+ + LA + F + M D ++ Sbjct: 226 LSAYLYSSAGTGESTTDLAWDGQTSIFEAGEMLA-ESDRFPDGAQMAVADVDLDLLRQER 284 Query: 251 LSQWNYMSDDSASTM-------------------------------YIPLQEEEAD---- 275 L Q + DD+ ++P E + Sbjct: 285 LRQGTF--DDNRRLFGDATRGFRTVAFRLDAGEEDVGLLRTVPRLPFVPAAAERLEQDCY 342 Query: 276 --YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPY 328 YN V L ++ ++IG+SGG+DS + AA A+D LG + ++ +P Sbjct: 343 EAYNIQVAGLVQRLRATGMGTLVIGVSGGLDSTHALIVAARAMDRLGLPRTGIRAYTMPG 402 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-FLQEEP-SGIVAENIQSRI 386 TS + +A ALG L I N M F + E + EN+Q+ + Sbjct: 403 FGTSEGTKSNAWKLMTALGVTAQELDIRPAANQMLRDMDHPFARGEAIYDVTFENVQAGL 462 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRN 445 R + L L+N ++L T + SE+++G+ T GD +N + KT + L W Sbjct: 463 RTDYLFRLANQHNGIVLGTGDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVG 522 Query: 446 SHG-----ITSGLGPL--TEVIPPSILEKSPSAELRPHQTDQESLPPYPILD 490 G ++ L + TE+ P E P+ + Q+ + + PY + D Sbjct: 523 RTGQFQREVSETLDAILKTEISP----ELVPAGSDKALQSSESVVGPYDLQD 570 >gi|297618574|ref|YP_003706679.1| NAD+ synthetase [Methanococcus voltae A3] gi|297618634|ref|YP_003706739.1| NAD+ synthetase [Methanococcus voltae A3] gi|297377551|gb|ADI35706.1| NAD+ synthetase [Methanococcus voltae A3] gi|297377611|gb|ADI35766.1| NAD+ synthetase [Methanococcus voltae A3] Length = 301 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 19/232 (8%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 I L + N V +R+Y + V++GLSGGIDS+L A +AV ALG + V I++ Sbjct: 33 IELNVLDKKVNLIVDFIREYYETTGVKGVVLGLSGGIDSSLVAHLAVKALGADKVYGIIM 92 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF----FSLMSQFLQEEPSGIVAENI 382 P ++P E A LG Y + I L+ F +S +E + N+ Sbjct: 93 PESKSNPMDKEHGELVAHLLGINYHISDITPLMEAFGAGGYSKDENGNLKEFDKLADGNL 152 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 +SR R L +N + ++L T NKSEI +GYGT +GD+ P+ L+KT+V +LA Sbjct: 153 KSRFRMCTLYYHANKNNNLVLGTGNKSEIYMGYGTKFGDLGCDVLPIGHLFKTEVRELAR 212 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDII 493 + +P I+ K+PS L QTD++ + Y LD ++ Sbjct: 213 YIG--------------VPEDIITKAPSGGLWEGQTDEKEMGITYETLDKLL 250 >gi|34556649|ref|NP_906464.1| NH(3)-dependent NAD(+) synthetase [Wolinella succinogenes DSM 1740] gi|46396293|sp|Q7MAJ5|NADE_WOLSU RecName: Full=NH(3)-dependent NAD(+) synthetase gi|34482363|emb|CAE09364.1| NH(3)-DEPENDENT NAD(+) SYNTHETASE [Wolinella succinogenes] Length = 257 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 114/217 (52%), Gaps = 20/217 (9%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 + L A N V LR + + F KV++GLSGG+DSA+ A + +A+G EN+ +++ Sbjct: 1 MTLTNPSALVNQLVDFLRQELAQRGFKKVVVGLSGGVDSAVVARLCQEAIG-ENLHALLM 59 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +S +S+E A + + + I L L + L E + + N +R Sbjct: 60 PSSVSSKESVEHALLLCERFNLSHHIQSIAPL-----ELAFRELHPEATPLRIGNACARF 114 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R L S +++ T NKSEI +GYGTLYGD + NP+ DLYKT++FQLA + + Sbjct: 115 RMITLYDFSFKENRLVIGTGNKSEILLGYGTLYGDTACALNPIGDLYKTEIFQLAKFLS- 173 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 IP I++K+PSA+L Q+D++ L Sbjct: 174 -------------IPDEIIQKAPSADLFEGQSDEKEL 197 >gi|330997873|ref|ZP_08321707.1| NAD+ synthase [Paraprevotella xylaniphila YIT 11841] gi|329569477|gb|EGG51247.1| NAD+ synthase [Paraprevotella xylaniphila YIT 11841] Length = 643 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 118/500 (23%), Positives = 202/500 (40%), Gaps = 64/500 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA A VGD N + +A +G+++I F EL I+ Y DL ++ + Sbjct: 6 VRIATAIPGVKVGDCKYNAQQIESLIIQAEGKGVEIICFPELSITAYTCGDLFAQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + ++ T ++G P +LN ++ G I+ + K LPNY EF+ Sbjct: 66 EAEMCLISILDFTRSLDIISIIGLPVAYHGTLLNCAAVIQKGKILGLIPKTYLPNYKEFY 125 Query: 125 EKRTFIS----GYSNDPIVFRDIRL-------------GILICEDIWKNSNICKHLKKQG 167 E+R F S G SN + + + L G+ ICED+W L QG Sbjct: 126 EQRWFTSGDVHGNSNVLVCGQMVPLSRHLVFNTPSCCFGVEICEDVWAPIPPSSELVLQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K ++ Q + ++ G+ +++F G + ++ Sbjct: 186 AEIIFNLSADNEGVGKQDYLKSLLAQQSARCLAGYVFSGAGFGESTQDVVFAGKALIYEN 245 Query: 226 QQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMSDDSAS--------TM----------- 265 LA + F EQ +E + ++ + SAS TM Sbjct: 246 GMLLAENERFSFKEQLVYSEIDVECLRAERRVNTTFSASIARLRPHDTMRIDTELFASKD 305 Query: 266 -----------YIP----LQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P L E E + + L + V+IG+SGG+DS L Sbjct: 306 IELSRKVDPIPFVPAGKALNERCEEIFAIQIAGLAKRLVHTQTQTVVIGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI-HDLVNHFF 363 + D LG ++ + + +P T+ ++ +A K+LG + I + HF Sbjct: 366 LVCTKTFDKLGLSRKGIVGVTMPGFGTTNRTYTNAVNLMKSLGVTLREISIKKSCIQHFE 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 L + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 426 DLGFDMANHN---VTYENAQARERTQILMDVANQMNGMVVGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 483 SMYGVNASIPKTLVKHLVKW 502 >gi|323144704|ref|ZP_08079286.1| NAD+ synthase [Succinatimonas hippei YIT 12066] gi|322415521|gb|EFY06273.1| NAD+ synthase [Succinatimonas hippei YIT 12066] Length = 610 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 136/568 (23%), Positives = 230/568 (40%), Gaps = 111/568 (19%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 ++ Q+N + D+AGN K +A E A G ++LF EL +SG L +F++ C Sbjct: 7 LSAGQINTIPMDLAGNKTKIIKAVELAVDHGCGVVLFPELVLSGAGCAHLFKIPAFVRKC 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPR---QDQEGVLNSVVILDAGNIIAVRDKI-------- 115 D L + T + AG VVG D + N+ ++ G I+ + K Sbjct: 67 Q---DCLVALTKELPAGAVVGLGLPLLADNGRIYNAYAVIRRGEILGLTVKYLYKYDNPL 123 Query: 116 ---------NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 + S E +TF ++ I R LG+ D W + Sbjct: 124 DDSYRYFANTTEDVSCTIEGKTFY--VASRSINCRGFTLGV--AYDDWP-------VGFT 172 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + + NA+P+ L+ ++ ++ N +G + + +DGQ Sbjct: 173 DCDVVVIPNATPFELGSLESNLNQALNLSRDINAIVVKTNLLGCES------GTLVYDGQ 226 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADY--NACVLSLR 284 +A + K ++ + + + N + + I E+E D A L L Sbjct: 227 GIIAQKGKLIAKNSPFS-------FKRENIVCEKCG----IAPDEDENDLIVKAISLGLF 275 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCA-------AIAVDALGKEN----------------- 320 D++ K + LSGG DSALCA A+A++ LG + Sbjct: 276 DWMLKTRSKGFALSLSGGADSALCAVSVAVGQALALEHLGDKKYVEILRSLNIDVKDVEG 335 Query: 321 -----VQTIMLPYKYTS------------PQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 ++T ++P T+ + E AAC LG + L I V+ + Sbjct: 336 DHETYIKTEVMPKVLTTVYQASKSSGKITRNAAEKLAAC---LGSTHHELEISKAVDLYI 392 Query: 364 SLMSQF-----LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 L + L E + +NIQ+R R + +N +LL+T N SE VGY T+ Sbjct: 393 KLFDKANDGPSLSWEKDDLTLQNIQARSRLPSIWMFANRENKLLLSTGNLSEAVVGYCTM 452 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS----ILEKSPSAELR 474 GD GG +P+ + K+++ ++ HG+ LGP + + ++ P+AELR Sbjct: 453 DGDTVGGVDPVGGIGKSRILRINRQIADHGVN--LGPSAYIFNIKDLSFVADQEPTAELR 510 Query: 475 P--HQTDQESLPPYPILDDIIKRIVENE 500 P Q D++ L PY +LD+ I+R+ E Sbjct: 511 PGGEQKDEKDLMPYILLDE-IRRLFNAE 537 >gi|331002510|ref|ZP_08326028.1| hypothetical protein HMPREF0491_00890 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410326|gb|EGG89760.1| hypothetical protein HMPREF0491_00890 [Lachnospiraceae oral taxon 107 str. F0167] Length = 638 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 125/553 (22%), Positives = 226/553 (40%), Gaps = 80/553 (14%) Query: 7 IAIAQLNP--VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I +A ++P V D+A N + A ++ +G +I+F EL ++ Y DL F+ + I+ Sbjct: 6 IRVASVSPDIRVCDVAYNKESIKDAIKKEWDEGSSIIVFPELCLTSYTCNDLFFQDTLIK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + + I +G P + + N ++ G ++ + +K+NLPNY EF+ Sbjct: 66 EAKHALKEIVEFSSGHKSIIFIGLPWDFKGKLYNVAAVISNGILLGLINKLNLPNYGEFY 125 Query: 125 EKRTFISGYSNDPI---VFRD-IRLG--IL--------------ICEDIWKNSNICKHLK 164 E R F G+ DP+ F D I +G IL ICED+W + Sbjct: 126 EARYFNRGFK-DPVWVDFFDDVIPMGTNILFECSNVPNLIIAGEICEDLWVPNPPSVEHA 184 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L + +AS K+ R +++ + IY N G+ +L+F G Sbjct: 185 LAGANVLVNCSASNDIVGKMSYRDNLISNHSKKLISAYIYANAGEGESTQDLVFGGQGII 244 Query: 223 FDGQQQLAFQMKHFSEQNFM----------------------------------TEWHYD 248 + + LA + +E + E + Sbjct: 245 AENGKILAKSTRFKNEAVRIEIDVNRLVLERRKQTTFEQGDEDGYFKSEFELEPVELEFK 304 Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++ DD + + E L L+ + VI+G+SGG+DS L Sbjct: 305 RNFDSKPFVPDDMSKRK----ERCEEILTIQALGLKKRLLHTGAKNVILGISGGLDSTLA 360 Query: 309 ---AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 A D LG K ++ + +P T+ ++ +A ++ G + + I + + F Sbjct: 361 LLVCAKTFDMLGFDKSGIRAVTMPGFGTTDRTYNNACELTESFGATLEEISIVESIKRHF 420 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 ++ + + I EN Q+R R ILM ++N +++ T + SE+ +G+ T GD Sbjct: 421 LDINHDINIK--NITYENAQARERTQILMDIANRDNGLVVGTGDLSELVLGWATYNGDHM 478 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQ 477 + + KT V L N + T+ + ++ IL+ S EL P Q Sbjct: 479 SMYGVNASIPKTLVRHLV---NYYADTTDDKKIANIL-YDILDTPVSPELLPPENGKIAQ 534 Query: 478 TDQESLPPYPILD 490 ++ + PY + D Sbjct: 535 KTEDLVGPYELHD 547 >gi|284166769|ref|YP_003405048.1| NAD+ synthetase [Haloterrigena turkmenica DSM 5511] gi|284016424|gb|ADB62375.1| NAD+ synthetase [Haloterrigena turkmenica DSM 5511] Length = 302 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 26/264 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R V+ V++ +SGGIDS A +AV+ALG + V + LP + + +A Sbjct: 38 IRTTVEDAGATGVVVAMSGGIDSTATAELAVEALGSDRVLGLGLPCHKSERTGVSEARTI 97 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE---------NIQSRIRGNILMA 393 A+ LG ++ + + ++ F + L+ + G N+ +R+R Sbjct: 98 AEGLGIEFREIQLRPVLEAFKETAAIELESQDDGDDGRPDERNHAFGNVIARLRMCCAYY 157 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 +N ++L T+N+SE+ +GY T YGD + PL DLYKT+V LA + Sbjct: 158 AANRQHRLVLGTANRSELLLGYFTKYGDGAADAYPLGDLYKTEVRALAKR---------I 208 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESFINNDQ--EY 510 G +P I+ K PSA QTD + L Y ++D +++R+V+ +ES + E Sbjct: 209 G-----VPRRIVSKEPSAGFWADQTDADELGATYDVIDPLLQRLVDEDESIEDAAATLEI 263 Query: 511 NDETVRYVEHLLYGSEYKRRQAPV 534 + ET R + L +E+KR P Sbjct: 264 DRETARSIAWLCAETEHKRSLPPT 287 >gi|256544647|ref|ZP_05472019.1| glutamine-dependent NAD+ synthetase [Anaerococcus vaginalis ATCC 51170] gi|256399536|gb|EEU13141.1| glutamine-dependent NAD+ synthetase [Anaerococcus vaginalis ATCC 51170] Length = 604 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 139/606 (22%), Positives = 253/606 (41%), Gaps = 71/606 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K LK+ +G+I+ N K + + AN ++++L EL ++G D Sbjct: 1 MKKNLKLRAENFKIKIGNISYNKKKIKETIKRANDDLVNVLLLPELCLTGASLYDGFAND 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIA--VRDKI--- 115 ++ C A+ LK+ + + VG P ++ +++ V +L G+II +D+ Sbjct: 61 DILEECLDALFDLKNFSKNIDTLFSVGLPVKEGRKIIDMVFLLKEGDIIGGFFKDEFKDH 120 Query: 116 -----NLPNYSEFHE-KRTFISGYSNDPIVFRDIRLGILICEDIWKN---SNICKHLKKQ 166 + P EF + +I Y+ I DI++ + + E+ KN S I K K Sbjct: 121 EKYVFDTPEEDEFIKINDEYIHLYNKSYIEINDIKIAVSVGENEEKNIPDSLISKS--KN 178 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG- 225 + + + +A Y K + +I + IY+ G E F ++G Sbjct: 179 NIDIILNPSAKTRYIGSKKD----IEDKIKFLSKDTIYLYSSTGLGE---SSTDFVYEGL 231 Query: 226 -------------QQQLAFQMKHFSEQNFMTEWHYDQQ----LSQWN---YMSDDSASTM 265 + + A +F TE ++ + LS W+ Y+ DD + Sbjct: 232 NIIGENGKIKESKRDEFADLCSYFDISQNTTEEFFEFKNKPSLSYWDKFPYLLDDKK--I 289 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKEN 320 Y+ E ++ +L ++ + KV++GLSGG+DS + V A L KEN Sbjct: 290 YV-----EDAFDIVTRALIQRMEAISCKKVVLGLSGGLDSTMALLFIVKAFEKMSLPKEN 344 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 + +P TS ++ +A +A K + + I D VN + + I E Sbjct: 345 ILLYTMPAFGTSKRTKSNAFKLVEAFEIKLNEIVIKDAVNIHLKDIGH--DGKTQDIAYE 402 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N Q+R R IL + N A+++ T +KSEIS G+ T GD + L KT++ + Sbjct: 403 NAQARERTQILFDIGNMENALVIGTGDKSEISQGFATYNGDHMSSYAVNASLTKTELRYI 462 Query: 441 ASWRNSHGITSGLGPLTEVI--PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE 498 S+ + L + + I P E E + Q ++ + PY ++D +E Sbjct: 463 VSYLVENTKNQKLKEVLDDILKTPISPELKNENEEKISQKTEDIIGPYELIDFFTFEFLE 522 Query: 499 N-------EESFINNDQEYNDETVRYVEHLLY----GSEYKRRQAPVGTKITAKSFGRDR 547 N E++ + +Y+ +T++ Y S++KR + G ++ KSF R Sbjct: 523 NSSVEEIYEKAKVAFKDDYDKKTIKKWLKSFYKRLITSQFKRSVSVDGPALSQKSFSPKR 582 Query: 548 LYPISN 553 Y +++ Sbjct: 583 GYLLAS 588 >gi|320094460|ref|ZP_08026239.1| NAD synthetase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978634|gb|EFW10198.1| NAD synthetase [Actinomyces sp. oral taxon 178 str. F0338] Length = 694 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 128/579 (22%), Positives = 234/579 (40%), Gaps = 96/579 (16%) Query: 29 AREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF 88 A + + +G+ L +F EL +SGY +DL+ + + + A+ ++ + +VVG Sbjct: 36 AARQLSERGVALAVFPELCVSGYALDDLLLQDTLLDNVEKALASIVGASAGLLPLLVVGA 95 Query: 89 PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFIS----------------- 131 P + + N + + G ++A+ K +LPNY EF+EKR F++ Sbjct: 96 PLRKDNALYNCAIAIHRGRVLAIIPKSHLPNYREFYEKRYFVTMPPRACERIEAPWGGIE 155 Query: 132 GYSNDPIVFR------------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 +S P+ + +GI ICED+W L GA L +L+ASP Sbjct: 156 EFSGAPVWVPFGQVLLSAADVPGLTIGIEICEDMWVPVTPATELALAGATVLANLSASPI 215 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFS 237 + R +V + +Y G+ +L +DG + ++ +LA + F Sbjct: 216 TVGRGADRELMVRSVSARCSAAYVYTAAGMGESSTDLAWDGETMVYEAGDRLAIG-ERFQ 274 Query: 238 EQNFMTEWHYD-----QQLSQWNYMSDDS----ASTMYIPLQEEE--------------- 273 E MT D + + N +D++ A + QE E Sbjct: 275 EGAHMTIADVDLERLRTERKRQNSFTDNAQRYFAGDERMTPQEVEFTLNPPRTDLGLQRP 334 Query: 274 -------------------ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAI 311 YN V L ++ KV+IG+SGG+DS + A+ Sbjct: 335 VDRFPFVPDDPSRLEQDCYEAYNIQVAGLVQRLRAIGDPKVVIGVSGGLDSTHALVVASR 394 Query: 312 AVDALGKENVQTI--MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+D LG+ + LP TS ++ ++A + LG + + I + + Sbjct: 395 AMDLLGRPRTDILCYTLPGFATSERTKKNATLLCRYLGTSFQEIDIRPAATQMLADIGHP 454 Query: 370 LQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGF 426 E + + EN+Q+ +R + L L+NH ++L T + SE+++G+ T GD + Sbjct: 455 YGEGEAAYDVTFENVQAGLRTDYLFRLANHLGGIVLGTGDLSELALGWCTYGVGDQMSHY 514 Query: 427 NPLKDLYKTQVFQLASWR------NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 + KT + L W + H L L I P ++ P ++ Q+ Q Sbjct: 515 AVNTGVPKTLMQHLIRWVVASKQFDDHVGEVLLSILNTEISPELVPAKPGEKM---QSTQ 571 Query: 481 ESLPPYPILD----DIIKRIVENEESFINNDQEYNDETV 515 + + PY + D +++R + ++ ++D +V Sbjct: 572 DKIGPYNLQDFTLYHVLRRGARPSKIAFLAEKAWSDASV 610 >gi|319642087|ref|ZP_07996753.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_40A] gi|317386353|gb|EFV67266.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_40A] Length = 641 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 127/591 (21%), Positives = 246/591 (41%), Gaps = 87/591 (14%) Query: 33 ANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 A+ +G+ +I+F EL I+GY DL + ++ A+ + ++T ++G P Sbjct: 34 ADGKGVQIIIFPELSITGYTCADLFGQSLLLEEAEMALMQIMNNTRQMDIISIIGMPVVM 93 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS-----------NDPIVFR 141 +LNS VI G I+ + K LPNY EF+E+R F S + N P+ Sbjct: 94 NSTLLNSAVIFQKGKILGIVPKTYLPNYKEFYEQRWFTSALNHPDANVRLCGQNVPVSAN 153 Query: 142 ------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQI 195 + GI ICED+W L +GAE +F+++A +K +V+ Q Sbjct: 154 LLFDTPETCFGIEICEDMWAPIPPSSALALKGAEIIFNMSADNEGISKHNYVRSLVSQQS 213 Query: 196 SHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMK-HFSEQNFMTEWHYD---- 248 + ++ + G+ +++F G ++ LA + F EQ ++E + Sbjct: 214 ARCLAGYVFSSSGFGESTTDVVFAGNGLIYENGTLLAESERFSFKEQLVISEIDVERLRG 273 Query: 249 QQLSQWNY--------------MSDDSASTM------------YIPLQEE-----EADYN 277 ++L+ + +S + +T ++P +E E + Sbjct: 274 ERLTNTTFAANIGNCPGRPAIHISTEFVNTRDLSLTRSIEAHPFVPQGKELDERCEEIFA 333 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTS 332 + L + + V++G+SGG+DS L + L ++ + I +P T+ Sbjct: 334 IQIAGLAKRLVHTHCKTVVVGISGGLDSTLALLVCAKTFDKLDLPRKGIIGITMPGFGTT 393 Query: 333 PQSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 ++ +A +LG + I + + HF + + + EN Q+R R IL Sbjct: 394 DRTYNNALHLMASLGVTIKEISIKESCIQHFNDINHDMTVHD---VTYENSQARERTQIL 450 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 M ++N +++ T + SE+++G+ T GD + + KT V L +W +G+ + Sbjct: 451 MDVANQLGGLVIGTGDLSELALGWATYNGDHMSMYGVNGSIPKTLVKYLVNWVALNGMDN 510 Query: 452 GLGPLTEVIPPSILEKSPSAELRP-------HQTDQESLPPYPILDDIIKRIV----ENE 500 + + I++ S EL P Q ++ + PY + D + + + Sbjct: 511 E----SRITLLDIVDTPISPELIPADENGNIKQKTEDLVGPYELHDFFLYQFLRFGFRPA 566 Query: 501 ESF----INNDQEYNDETVRYVEHL----LYGSEYKRRQAPVGTKITAKSF 543 + F I Y++ET++ + + ++KR P G K+ + S Sbjct: 567 KIFFLASIAFRDTYDEETIKKWLTIFCRRFFQQQFKRSCLPDGPKVGSVSL 617 >gi|254882573|ref|ZP_05255283.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 4_3_47FAA] gi|254835366|gb|EET15675.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 4_3_47FAA] Length = 654 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 127/591 (21%), Positives = 246/591 (41%), Gaps = 87/591 (14%) Query: 33 ANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 A+ +G+ +I+F EL I+GY DL + ++ A+ + ++T ++G P Sbjct: 47 ADGKGVQIIIFPELSITGYTCADLFGQSLLLEEAEMALMQIMNNTRQMDIISIIGMPVVM 106 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS-----------NDPIVFR 141 +LNS VI G I+ + K LPNY EF+E+R F S + N P+ Sbjct: 107 NSTLLNSAVIFQKGKILGIVPKTYLPNYKEFYEQRWFTSALNHPDANVRLCGQNVPVSAN 166 Query: 142 ------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQI 195 + GI ICED+W L +GAE +F+++A +K +V+ Q Sbjct: 167 LLFDTPETCFGIEICEDMWAPIPPSSALALKGAEIIFNMSADNEGISKHNYVRSLVSQQS 226 Query: 196 SHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMK-HFSEQNFMTEWHYD---- 248 + ++ + G+ +++F G ++ LA + F EQ ++E + Sbjct: 227 ARCLAGYVFSSSGFGESTTDVVFAGNGLIYENGTLLAESERFSFKEQLVISEIDVERLRG 286 Query: 249 QQLSQWNY--------------MSDDSASTM------------YIPLQEE-----EADYN 277 ++L+ + +S + +T ++P +E E + Sbjct: 287 ERLTNTTFAANIGNCPGRPAIHISTEFVNTRDLSLTRSIEAHPFVPQGKELDERCEEIFA 346 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTS 332 + L + + V++G+SGG+DS L + L ++ + I +P T+ Sbjct: 347 IQIAGLAKRLVHTHCKTVVVGISGGLDSTLALLVCAKTFDKLDLPRKGIIGITMPGFGTT 406 Query: 333 PQSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 ++ +A +LG + I + + HF + + + EN Q+R R IL Sbjct: 407 DRTYNNALHLMASLGVTIKEISIKESCIQHFNDINHDMTVHD---VTYENSQARERTQIL 463 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 M ++N +++ T + SE+++G+ T GD + + KT V L +W +G+ + Sbjct: 464 MDVANQLGGLVIGTGDLSELALGWATYNGDHMSMYGVNGSIPKTLVKYLVNWVALNGMDN 523 Query: 452 GLGPLTEVIPPSILEKSPSAELRP-------HQTDQESLPPYPILDDIIKRIV----ENE 500 + + I++ S EL P Q ++ + PY + D + + + Sbjct: 524 E----SRITLLDIVDTPISPELIPADENGNIKQKTEDLVGPYELHDFFLYQFLRFGFRPA 579 Query: 501 ESF----INNDQEYNDETVRYVEHL----LYGSEYKRRQAPVGTKITAKSF 543 + F I Y++ET++ + + ++KR P G K+ + S Sbjct: 580 KIFFLASIAFRDTYDEETIKKWLTIFCRRFFQQQFKRSCLPDGPKVGSVSL 630 >gi|229828136|ref|ZP_04454205.1| hypothetical protein GCWU000342_00193 [Shuttleworthia satelles DSM 14600] gi|229792730|gb|EEP28844.1| hypothetical protein GCWU000342_00193 [Shuttleworthia satelles DSM 14600] Length = 637 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 113/517 (21%), Positives = 215/517 (41%), Gaps = 70/517 (13%) Query: 37 GMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV 96 G +++F EL I+ Y DL +++ I + + T A I +G P + + + Sbjct: 38 GAKIMVFPELAITSYTASDLFLQEALIDQAKEELGRIAKATEGVDALIFIGLPWEHKCKL 97 Query: 97 LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF--------ISGYSNDPIVF-------- 140 N +L+ GN++ + K +LPNY+EF+E R F ++ + D + F Sbjct: 98 YNVAAVLNRGNLLGLVPKKHLPNYNEFYELRHFTPAADEIDLTDWQEDQVPFGTNLLFAC 157 Query: 141 RDIRLGIL---ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 R++ I+ ICED+W + + GA L +L+AS K R +++ + Sbjct: 158 RELPHLIVSAEICEDLWVPAPPSTSHAEAGATVLVNLSASDEMTGKAAYRRQLLMAHSAS 217 Query: 198 VHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW- 254 IY + G+ +L+F + LA + F ++E ++ ++ Sbjct: 218 TVSAYIYASSGDGESTQDLVFGSHKLIVENGSILA-ESPRFVNGTLLSEIDVNRLAAERR 276 Query: 255 ---NYMSDDSASTMYIPLQEE----------------EADYN----AC-------VLSLR 284 Y + D + +P + +D N C + L+ Sbjct: 277 RISTYPAADRDDYLTLPFSLDLTKTGLTRTFPSAPFVPSDKNLRAKRCEEILTIQAMGLK 336 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDA 339 + +IG+SGG+DS L + V A L +EN+ + +P T+ ++ +A Sbjct: 337 KRLLHTRAKSAVIGISGGLDSTLALLVTVKAFDLAGLNRENIICVTMPGFGTTDRTYTNA 396 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + L + I V+ F+ + ++ + EN Q+R R ILM ++N + Sbjct: 397 CQLTRLLKAALKEVDIKASVSQHFADIGHDIRVH--DVTYENSQARERTQILMDIANQTG 454 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++ T + SE+++G+ T GD + + KT V L ++ + + G L + Sbjct: 455 GLVIGTGDLSELALGWATYNGDHMSMYGVNASIPKTLVRYLVAF---YADSCGENALAAI 511 Query: 460 IPPSILEKSPSAELRP------HQTDQESLPPYPILD 490 + IL+ S EL P Q ++ + PY + D Sbjct: 512 L-RDILDTPVSPELLPPREGLISQKTEDLVGPYELHD 547 >gi|315605989|ref|ZP_07881020.1| NAD synthetase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312271|gb|EFU60357.1| NAD synthetase [Actinomyces sp. oral taxon 180 str. F0310] Length = 702 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 125/579 (21%), Positives = 234/579 (40%), Gaps = 96/579 (16%) Query: 29 AREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF 88 A + + +G+ + +F EL +SGY +DL+ + + A+ ++ + D +VVG Sbjct: 36 AARQLDARGVAVAVFPELCVSGYSIDDLLLQDVLLDNVEKALASIVEASTDLLPLLVVGA 95 Query: 89 PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG---------------- 132 P + + N V + G ++A+ K +LPNY EF+EKR F++ Sbjct: 96 PLRKDNALYNCAVAIHRGRVLAIIPKSHLPNYREFYEKRYFVTAPARTRERIEVPWGGIE 155 Query: 133 -YSNDPIV------------FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 +S P+ + +GI ICED+W L GA L +L+ASP Sbjct: 156 EFSGTPVWVPFGQVLLSAADVPGLSVGIEICEDMWVPVTPATELALAGATVLANLSASPI 215 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFS 237 + R +V + +Y G+ +L +DG + ++ +LA + F Sbjct: 216 TVGRGADRELMVRSVSARCSAAYVYTAAGMGESSTDLAWDGETMIYEAGDRLAIG-ERFQ 274 Query: 238 EQNFMTEWHYDQQL--------------SQWNYMSDDSASTMYI---------------- 267 E MT D + +Q + D+ + + Sbjct: 275 EGAHMTITDVDLERLRTERKRQNSFTDNAQRYFAGDERMAPQEVEFTLNPPRTDLGLIRP 334 Query: 268 ----------PLQEEEADYNACVLSLRDYVQKNNF---HKVIIGLSGGIDSA---LCAAI 311 P + E+ Y A + + VQ+ K++IG+SGG+DS + A+ Sbjct: 335 VNRFPFVPNDPTRLEQDCYEAYNIQVAGLVQRLRAIGNPKIVIGVSGGLDSTHALVVASR 394 Query: 312 AVDALGKENVQTI--MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+D LG+ + LP TS ++ +A + LG + + I + + Sbjct: 395 AMDLLGRPRTDILCYTLPGFATSERTKRNATLLCRYLGTSFQEIDIRPAATQMLADIGHP 454 Query: 370 LQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGF 426 E + + EN+Q+ +R + L L+NH +++ T + SE+++G+ T GD + Sbjct: 455 YGEGEATYDVTFENVQAGLRTDYLFRLANHLGGIVVGTGDLSELALGWCTYGVGDQMSHY 514 Query: 427 NPLKDLYKTQVFQLASWR------NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 + KT + L W + H L L I P ++ P ++ Q+ Q Sbjct: 515 AVNTGVPKTLMQHLIRWVVASKQFDDHVGEVLLSILNTEISPELVPAKPGEKM---QSTQ 571 Query: 481 ESLPPYPILD----DIIKRIVENEESFINNDQEYNDETV 515 + + PY + D +++R + ++ ++D +V Sbjct: 572 DKIGPYNLQDFTLYHVLRRGARPSKIAFLAEKAWSDASV 610 >gi|313898301|ref|ZP_07831838.1| NAD+ synthase [Clostridium sp. HGF2] gi|312956683|gb|EFR38314.1| NAD+ synthase [Clostridium sp. HGF2] Length = 549 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 123/497 (24%), Positives = 214/497 (43%), Gaps = 79/497 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ ++ G N++ ++ ++A + D+I+F + +SGY D + + Sbjct: 1 MKVAVVTMHVKQGKCEENVSYMKQMIQKAREEQADMIVFPQNAVSGYLLGDQWLDDDWCR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S + L +++ D IV G R N+ +R K N P Y++ Sbjct: 61 YVDSFNEALLAESED--IAIVWGNIRYRNRRRFNAA-FFAYRKQTHMRVKRNTP-YTD-- 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 + R F N I F+ + ++ Q + +L+A+ Y Sbjct: 115 DARYFEENPINSAIEFKGHVFALNFGREV------------QLTDININLDAAMY----- 157 Query: 185 KKRHEIVTGQISHVHL---PIIYVNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFS 237 ++ H + +IY N +G G+D ++ G S Q+++ +Q F Sbjct: 158 ---------ELDHTYSLKGNVIYANALGMQNSGKDVVVMAGGS-GVRMQKKIIYQAAWF- 206 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK--NNFHKV 295 H Q+ D A T + + + +A +L +RD+ + N Sbjct: 207 --------HEGMQIV-------DLAETREVESTQPQL-LDALLLGIRDFDAQIFNRAIPW 250 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+G+SGG+DS++ AA+ V ALG + V + ++ S ++ +AAA AKALG Y + Sbjct: 251 IVGMSGGLDSSVTAALLVAALGPKRVYGYNIATRHNSTTTISNAAAEAKALGIAYQEGNM 310 Query: 356 HDLVNHFFSLMSQ---FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 LV L + + E +V EN+Q+R RG +L + +++ NK E + Sbjct: 311 ETLVQASVELFHKEYGYAVEAMPSLVMENVQARSRGYLLSGFAGILGGVVVNNGNKVETA 370 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL------- 465 +GY TLYGD G + + DL K Q+F L+ N+H G EV+P ++L Sbjct: 371 LGYCTLYGDSIGALSLIGDLTKVQLFDLSKALNAH-----FGK--EVVPLNLLPCVHEHG 423 Query: 466 ---EKSPSAELRPHQTD 479 PSAEL+ Q D Sbjct: 424 MDWTMPPSAELKDAQFD 440 >gi|224540762|ref|ZP_03681301.1| hypothetical protein BACCELL_05676 [Bacteroides cellulosilyticus DSM 14838] gi|224517629|gb|EEF86734.1| hypothetical protein BACCELL_05676 [Bacteroides cellulosilyticus DSM 14838] Length = 667 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 123/504 (24%), Positives = 204/504 (40%), Gaps = 72/504 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + A +G+ +I F EL ++GY DL ++ ++ Sbjct: 31 VKVAAAVPRVKVADCKFNAREIEKEIIIAEGKGVQIIAFPELCVTGYTCGDLFAQQLLLE 90 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + S+T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 91 EAEMGLIQIVSNTRQLDIIAILGMPIAMNGVLLNAAVVIQKGKVLGVVPKTYLPNYKEFY 150 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S R D GI ICED+W L QG Sbjct: 151 EKRWFTSAVDVSERSVRLCGQVVPMGTDLLFETADTTFGIEICEDLWAPIPPSSSLALQG 210 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPII--YVNQVGGQDE-----------L 214 AE LF+L+A N+ +H + IS I YV G E L Sbjct: 211 AEILFNLSAD----NEGIGKHNYLCSLISQQSARCIAGYVFCSCGFGESTTDVVFAGNGL 266 Query: 215 IFDGAS-------FCFDGQQQLA-FQMKHFSEQNFM--------------------TEWH 246 IF+ S F F+GQ ++ ++H + + TE+ Sbjct: 267 IFENGSLIARSKRFSFEGQVIISEIDVEHLRTERRVNTTFSACRAHCAPGEAVRVSTEYV 326 Query: 247 YDQQLSQWNYMSDDSASTMYIPLQEE-EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++L+ + L E E ++ V L + ++G+SGG+DS Sbjct: 327 NSKELNLTRCFDPHPFVPQGVELNERCEEIFSIQVSGLAQRLVHTAAKSAVVGISGGLDS 386 Query: 306 ALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LV 359 L + V D LG ++++ + +P T+ ++ +A +LG + I + + Sbjct: 387 TLALLVCVKTFDKLGWSRKDIIGVTMPGFGTTDRTYTNALDLMNSLGITVREVSIKEACI 446 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 HF + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T Sbjct: 447 QHF---KDIDHDIDVHDVVYENAQARERTQILMDIANQTWGMVIGTGDLSELALGWATYN 503 Query: 420 GDMSGGFNPLKDLYKTQVFQLASW 443 GD + + KT V L W Sbjct: 504 GDHMSMYGVNGSVPKTLVKYLVKW 527 >gi|150004902|ref|YP_001299646.1| NAD synthetase [Bacteroides vulgatus ATCC 8482] gi|149933326|gb|ABR40024.1| glutamine-dependent NAD+ synthetase [Bacteroides vulgatus ATCC 8482] Length = 641 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 126/591 (21%), Positives = 246/591 (41%), Gaps = 87/591 (14%) Query: 33 ANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 A+ +G+ +I+F EL I+GY DL + ++ A+ + ++T ++G P Sbjct: 34 ADGKGVQIIIFPELSITGYTCADLFGQSLLLEEAEMALMQIMNNTRQMDIISIIGMPVVM 93 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS-----------NDPIVFR 141 +LNS V+ G I+ + K LPNY EF+E+R F S + N P+ Sbjct: 94 NSTLLNSAVVFQKGKILGIVPKTYLPNYKEFYEQRWFTSALNHPDANVRLCGQNVPVSAN 153 Query: 142 ------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQI 195 + GI ICED+W L +GAE +F+++A +K +V+ Q Sbjct: 154 LLFDTPETCFGIEICEDMWAPIPPSSALALKGAEIIFNMSADNEGISKHNYVRSLVSQQS 213 Query: 196 SHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMK-HFSEQNFMTEWHYD---- 248 + ++ + G+ +++F G ++ LA + F EQ ++E + Sbjct: 214 ARCLAGYVFSSSGFGESTTDVVFAGNGLIYENGTLLAESERFSFKEQLVISEIDVERLRG 273 Query: 249 QQLSQWNY--------------MSDDSASTM------------YIPLQEE-----EADYN 277 ++L+ + +S + +T ++P +E E + Sbjct: 274 ERLTNTTFAANIGNCPGRPAIHISTEFVNTRDLSLTRSIEAHPFVPQGKELDERCEEIFA 333 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTS 332 + L + + V++G+SGG+DS L + L ++ + I +P T+ Sbjct: 334 IQIAGLAKRLVHTHCKTVVVGISGGLDSTLALLVCAKTFDKLDLPRKGIIGITMPGFGTT 393 Query: 333 PQSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 ++ +A +LG + I + + HF + + + EN Q+R R IL Sbjct: 394 DRTYNNALHLMASLGVTIKEISIKESCIQHFNDINHDMTVHD---VTYENSQARERTQIL 450 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 M ++N +++ T + SE+++G+ T GD + + KT V L +W +G+ + Sbjct: 451 MDVANQLGGLVIGTGDLSELALGWATYNGDHMSMYGVNGSIPKTLVKYLVNWVALNGMDN 510 Query: 452 GLGPLTEVIPPSILEKSPSAELRP-------HQTDQESLPPYPILDDIIKRIV----ENE 500 + + I++ S EL P Q ++ + PY + D + + + Sbjct: 511 E----SRITLLDIVDTPISPELIPADENGNIKQKTEDLVGPYELHDFFLYQFLRFGFRPA 566 Query: 501 ESF----INNDQEYNDETVRYVEHL----LYGSEYKRRQAPVGTKITAKSF 543 + F I Y++ET++ + + ++KR P G K+ + S Sbjct: 567 KIFFLASIAFRDTYDEETIKKWLTIFCRRFFQQQFKRSCLPDGPKVGSVSL 617 >gi|163785671|ref|ZP_02180206.1| NAD synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159879059|gb|EDP73028.1| NAD synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 114 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 84/123 (68%), Gaps = 12/123 (9%) Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKR 495 +V++LA +RNS ++ VIP +LEK PSAELRP Q D++ L PY ILD+I+K Sbjct: 1 KVYELAIYRNS---------ISPVIPERVLEKPPSAELRPGQKDEDELLPYHILDEILKL 51 Query: 496 IVENEESFINNDQEY--NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 +E + S ++ EY ++ +VR V ++ +EYKRRQAP+G KIT K+FG+DR PI+N Sbjct: 52 YIEEDLS-VDEIVEYGFDENSVRKVARMVDRNEYKRRQAPIGIKITEKAFGKDRRMPITN 110 Query: 554 KFR 556 KF+ Sbjct: 111 KFK 113 >gi|255505933|ref|ZP_05348950.3| glutamine-dependent NAD+ synthetase [Bryantella formatexigens DSM 14469] gi|255265057|gb|EET58262.1| glutamine-dependent NAD+ synthetase [Bryantella formatexigens DSM 14469] Length = 641 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 140/610 (22%), Positives = 246/610 (40%), Gaps = 84/610 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A V D N A+ A +EA G +I+F EL I+GY DL +++ + Sbjct: 6 VKVAAVTPELKVADCIYNTAQICEAAKEAADAGAKIIVFPELGITGYTCCDLFWQERLLV 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + + A + VG P + ++ + N + G ++ + K LPNY+EF+ Sbjct: 66 SAKEGLRKIVDASRMWDALVFVGLPWEKEQKLYNVAAAVSRGRLLGLVPKRFLPNYAEFY 125 Query: 125 EKRTFISGYSN--------DPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F G +N P+ F + + ICED+W Sbjct: 126 EARHFTPGDANISWTEFEGSPVPFGQNLLFVCREMEGLTVAAEICEDLWAPDPPSTRHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K R +V Q + + +Y + G+ +L+F G + Sbjct: 186 AGATVLVNLSASDENTGKSIYREALVANQSARLICGYLYASAGEGESTTDLVFGGHNLIA 245 Query: 224 DGQQQLAFQMKHF---------------SEQNFMTEWHYDQQL----------SQWNYMS 258 + LA Q F SE+ MT + + ++ ++ Sbjct: 246 ENGTVLA-QSPRFTNGIIYSELDIHRLRSERRRMTTFQCAENTEYEKIPFHLETEETVLT 304 Query: 259 DDSASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSA---LC 308 D ++P + D C L L+ + ++IG+SGG+DS L Sbjct: 305 RDFTPMPFVPADRGDRD-RRCEEILIIQALGLKKRLLHTGCKSMVIGISGGLDSTLALLV 363 Query: 309 AAIAVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 AA A D +G E + ++ +P T+ ++ +A + LG + I + V F + Sbjct: 364 AAKAADMIGLERSAILSVTMPCFGTTDRTYRNACELTEKLGATLREVNIRNAVQVHFRDI 423 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 E + EN Q+R R ILM L+N S +++ T + SE+++G+ T GD + Sbjct: 424 GHDPDEH--DVTYENSQARERTQILMDLANKSGGLVIGTGDLSELALGWATYNGDHMSMY 481 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L + + T G L V+ +L+ S EL P Q + Sbjct: 482 AVNASVPKTLVRHLVRY---YADTCGDEALAGVL-QDVLDTPVSPELLPPKDGVISQRTE 537 Query: 481 ESLPPYPILDDIIKRIVE-----------NEESFINN-DQEYNDETVRYVEHLLYGSEYK 528 + + PY + D + ++ E +F D+E + ++ + ++K Sbjct: 538 DLVGPYELHDFFLYHMLRCGEEPSKVYRLAERAFAGTYDRETILKWLKTFYRRFFAQQFK 597 Query: 529 RRQAPVGTKI 538 R P G K+ Sbjct: 598 RSCLPDGPKV 607 >gi|294778468|ref|ZP_06743891.1| NAD+ synthetase [Bacteroides vulgatus PC510] gi|294447730|gb|EFG16307.1| NAD+ synthetase [Bacteroides vulgatus PC510] Length = 654 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 126/591 (21%), Positives = 246/591 (41%), Gaps = 87/591 (14%) Query: 33 ANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 A+ +G+ +I+F EL I+GY DL + ++ A+ + ++T ++G P Sbjct: 47 ADGKGVQIIIFPELSITGYTCADLFGQSLLLEEAEMALMQIMNNTRQMDIISIIGMPVVM 106 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS-----------NDPIVFR 141 +LNS V+ G I+ + K LPNY EF+E+R F S + N P+ Sbjct: 107 NSTLLNSAVVFQKGKILGIVPKTYLPNYKEFYEQRWFTSALNHPDANVRLCGQNVPVSAN 166 Query: 142 ------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQI 195 + GI ICED+W L +GAE +F+++A +K +V+ Q Sbjct: 167 LLFDTPETCFGIEICEDMWAPIPPSSALALKGAEIIFNMSADNEGISKHNYVRSLVSQQS 226 Query: 196 SHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMK-HFSEQNFMTEWHYD---- 248 + ++ + G+ +++F G ++ LA + F EQ ++E + Sbjct: 227 ARCLAGYVFSSSGFGESTTDVVFAGNGLIYENGTLLAESERFSFKEQLVISEIDVERLRG 286 Query: 249 QQLSQWNY--------------MSDDSASTM------------YIPLQEE-----EADYN 277 ++L+ + +S + +T ++P +E E + Sbjct: 287 ERLTNTTFAANIGNCPGRPAIHISTEFVNTRDLSLTRSIEAHPFVPQGKELDERCEEIFA 346 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTS 332 + L + + V++G+SGG+DS L + L ++ + I +P T+ Sbjct: 347 IQIAGLAKRLVHTHCKTVVVGISGGLDSTLALLVCAKTFDKLDLPRKGIIGITMPGFGTT 406 Query: 333 PQSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 ++ +A +LG + I + + HF + + + EN Q+R R IL Sbjct: 407 DRTYNNALHLMASLGVTIKEISIKESCIQHFNDINHDMTVHD---VTYENSQARERTQIL 463 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 M ++N +++ T + SE+++G+ T GD + + KT V L +W +G+ + Sbjct: 464 MDVANQLGGLVIGTGDLSELALGWATYNGDHMSMYGVNGSIPKTLVKYLVNWVALNGMDN 523 Query: 452 GLGPLTEVIPPSILEKSPSAELRP-------HQTDQESLPPYPILDDIIKRIV----ENE 500 + + I++ S EL P Q ++ + PY + D + + + Sbjct: 524 E----SRITLLDIVDTPISPELIPADENGNIKQKTEDLVGPYELHDFFLYQFLRFGFRPA 579 Query: 501 ESF----INNDQEYNDETVRYVEHL----LYGSEYKRRQAPVGTKITAKSF 543 + F I Y++ET++ + + ++KR P G K+ + S Sbjct: 580 KIFFLASIAFRDTYDEETIKKWLTIFCRRFFQQQFKRSCLPDGPKVGSVSL 630 >gi|332981605|ref|YP_004463046.1| NAD+ synthetase [Mahella australiensis 50-1 BON] gi|332699283|gb|AEE96224.1| NAD+ synthetase [Mahella australiensis 50-1 BON] Length = 312 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 141/306 (46%), Gaps = 58/306 (18%) Query: 272 EEADYNACVLSLRDYVQK--NNFHK--VIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 E AD + D+++ ++ + I+GLSGG+DSAL A +AV A+GK NVQ + +P Sbjct: 8 EIADKEKVCCQIEDFIKNIMTDWQREGCILGLSGGLDSALVAYLAVRAIGKANVQALFMP 67 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN--------------------------- 360 + +S QS +DA A+ LG + + L+ Sbjct: 68 ERDSSKQSYDDACLIAEILGLSMKEINLTPLLKKIGVYGLEPSPMFIPRPIQEHYVTQKY 127 Query: 361 HFFSLMSQ--FLQEEPSGIVAENIQS---------RIRGNILMALSNHSKAMLLTTSNKS 409 H +S + FL+ G+ +Q R+R +L ++L T NKS Sbjct: 128 HQYSTEEEPTFLKTLKGGVGQSELQKHIAYYRIKHRVRMVLLYFYGEMDNLLILGTCNKS 187 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E G+ YGD + +P+ DLYKTQV QLA + +IP I++K+P Sbjct: 188 EKMTGFFVKYGDSASDIDPIADLYKTQVKQLARYL--------------LIPDRIIDKAP 233 Query: 470 SAELRPHQTDQESLP-PYPILDDIIKRI-VENEESFINNDQEYNDETVRYVEHLLYGSEY 527 + +L P TD++++ Y LD ++ I + +E I + E + T+ Y++ L+ SE+ Sbjct: 234 TPDLMPGLTDEQAMRISYDKLDIVLMGIALSMDEQDIAQEAEVDPATIAYIKRLVQLSEH 293 Query: 528 KRRQAP 533 R P Sbjct: 294 MRNLPP 299 >gi|83717316|ref|YP_439116.1| NAD synthetase [Burkholderia thailandensis E264] gi|83651141|gb|ABC35205.1| glutamine-dependent NAD+ synthetase [Burkholderia thailandensis E264] Length = 802 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 137/572 (23%), Positives = 234/572 (40%), Gaps = 96/572 (16%) Query: 5 LKIAIAQLNPV-VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++IA+A + PV V D A N ++ A +A R ++ EL +S Y +DL +++ + Sbjct: 122 VRIAVA-IPPVRVADPAFNASRTIDAMRDAARAHALALVCPELGLSAYTCDDLFQQQALL 180 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A +A+ + + + D +VG P Q + N ++ G I A+ K L NY EF Sbjct: 181 DAGIAALGDVVAASRDLATIAIVGVPLQFGSTLYNCAAVVHRGRICAIVPKTYLANYREF 240 Query: 124 HEKRTFISG--YSNDPI-------------VFRDIRLGIL------ICEDIWKNSNICKH 162 +E R F SG + D + + +R L ICED+W + Sbjct: 241 YEARQFASGDALARDTVDLPMQSGIPCGSSLLFQVRARPLFTFHVEICEDLWVPVPPSSY 300 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA LF+L+AS K + R +V Q + Y G+ +L +DG Sbjct: 301 AALAGATVLFNLSASNATVAKAEYRRALVGNQSARCLAAYAYSGAGAGESTTDLAWDGHG 360 Query: 221 FCFDGQQQLAFQMKHFSEQ------NFMTEWHYDQQLSQWNYM------SDDSASTMYIP 268 F+ LA + + F+ + E +++ Q ++ + A+ IP Sbjct: 361 MLFENGVLLA-EARRFAPTPQLVIADVDVERLASERMRQTSFAHAALRHRNACAAFRTIP 419 Query: 269 LQEEEAD------YNAC------------------------VLSLRDYVQKNNFHKVIIG 298 L + D AC V L + ++++G Sbjct: 420 LDADIDDGRMLPLARACERFPYVPSDPAVRHGRCEEISEIQVQGLVTRMNAAGVDRLVLG 479 Query: 299 LSGGIDSALC---AAIAVDAL--GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY--- 350 +SGG+DS L A A DAL +++V LP TS ++ AA ALGC++ Sbjct: 480 VSGGLDSTLALLVCARATDALRLPRDHVLACTLPGFATSARTAGQAARLINALGCRHIDI 539 Query: 351 DVLP-----IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 D+ P + DL + F +++ EN+Q+ +R + L L+N A+++ T Sbjct: 540 DIRPACMRMLRDLDHPFARAQARY------DATFENVQAGMRTDYLFRLANRHGALVVGT 593 Query: 406 SNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP------LTE 458 + SE+++G+ T GD + + KT V L W G +G L Sbjct: 594 GDLSELALGWCTYGVGDQMSHYAVNASIPKTLVRYLVRWAAEQGPFAGAASPVLHDVLAT 653 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILD 490 I P ++ A+ P Q + ++ P+ + D Sbjct: 654 TISPELIPG--DADTEPAQQSETAVGPFELQD 683 >gi|147921058|ref|YP_685132.1| NH(3)-dependent NAD(+) synthetase [uncultured methanogenic archaeon RC-I] gi|110620528|emb|CAJ35806.1| NH(3)-dependent NAD(+) synthetase [uncultured methanogenic archaeon RC-I] Length = 269 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 127/262 (48%), Gaps = 22/262 (8%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP-YKYTSPQS 335 N + S+ V+ +N I LSGGIDSAL A +A + +V ++LP T+P+ Sbjct: 16 NLIMDSIVKIVELSNSSGATIALSGGIDSALVATLASRVV---DVYGLLLPDSASTTPED 72 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 + DA AK LG +V+ I DLV + + E + N++ R+R + + Sbjct: 73 MRDAELLAKELGIDCEVIEIGDLVQAVYDRRPRIGPAE-CRLAYANVKPRMRMIVNYFAA 131 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N ++L T NK+E+ +GY T YGD P+ DLYKTQV Q+A Sbjct: 132 NLDGRVVLGTGNKTELLMGYFTKYGDGGVDILPIGDLYKTQVRQMAKHLE---------- 181 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESF--INNDQEYND 512 +P +I+EK PSA L QTD+ + Y +D I+ + + S + N +D Sbjct: 182 ----VPAAIIEKPPSAGLWAGQTDEAEMGATYEEIDSILYAVFDLGMSLEDVENATGASD 237 Query: 513 ETVRYVEHLLYGSEYKRRQAPV 534 T++ V + SE+KR PV Sbjct: 238 ATIKMVMERVKNSEHKRSMPPV 259 >gi|163747495|ref|ZP_02154846.1| hypothetical protein OIHEL45_19166 [Oceanibulbus indolifex HEL-45] gi|161379251|gb|EDQ03669.1| hypothetical protein OIHEL45_19166 [Oceanibulbus indolifex HEL-45] Length = 703 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 130/563 (23%), Positives = 211/563 (37%), Gaps = 87/563 (15%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A P V D+A N A+ +DL++ EL +S Y +DL + + + Sbjct: 34 VRVATCTPRVRPADVAFNRDSLLEEMRRADTARVDLLVCPELSLSSYAIDDLHMQDALLN 93 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L T +++G P + + + N + + G ++ V K LPNY EF+ Sbjct: 94 AVEEALGALIEATAKMTPVVLLGAPLRREGRLYNCAIAISRGQVLGVVPKSYLPNYREFY 153 Query: 125 EKRTFISGYSN--------------DPIVFRDIRLGIL-----ICEDIWKNSNICKHLKK 165 EKR F G D ++F L L ICED+W + Sbjct: 154 EKRWFAHGRDTSGEITVAGRRVPFGDDLIFEATDLPGLIFHAEICEDLWTPAPPSADAAL 213 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH + Q +Y G+ +L +DG Sbjct: 214 GGALILANLSASNIVIGKSSDRHLLCRSQSMRAFAAYVYSAAGPGESTTDLAWDGQGMIH 273 Query: 224 DGQQQLAFQMK------------------------------------HFSEQNFMTEWHY 247 + LA + F F + HY Sbjct: 274 ELGDLLAESTRFPLEPELTIADVDCGRIQSERMRTGSFHDAARHRAPSFRRVTFTHQPHY 333 Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSG 301 + Q Y+P +E D +N V LR + ++IG+SG Sbjct: 334 ENAGLQRPLR-----RFPYVPNRESHLDQDCYEAFNIQVEGLRRRFEATKSKTMVIGISG 388 Query: 302 GIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + AA D +G ++ + +P TS + +A +A+G D + I Sbjct: 389 GLDSTHALIVAAKTCDRMGLPRDCILGFTMPGFATSEGTKSNAWKLMRAMGITADEIDIR 448 Query: 357 DLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 M F EP I EN+Q+ +R + L L+N + ++ T + SE+++G Sbjct: 449 PAARQMLEDMDHPFSDGEPVYDITFENVQAGLRTDYLFRLANQRQGFVIGTGDLSELALG 508 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD + + KT + L W G T+ + +ILE S EL Sbjct: 509 WCTYGVGDQMSHYAVNTGVPKTLIQYLIRWSTRSG---QFDAETDKVLDAILETEISPEL 565 Query: 474 RPH------QTDQESLPPYPILD 490 P Q+ + + PY + D Sbjct: 566 VPAAEGEDIQSTEAMIGPYELND 588 >gi|284102790|ref|ZP_06386054.1| NAD+ synthetase [Candidatus Poribacteria sp. WGA-A3] gi|283830308|gb|EFC34545.1| NAD+ synthetase [Candidatus Poribacteria sp. WGA-A3] Length = 187 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 19/189 (10%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSS 68 + Q+NPVVGD+ GN+ + +A R G D+++F EL ++GYPPEDLV + SF++ + Sbjct: 1 MVQMNPVVGDVDGNVRAMGKWVTQARRVGADIVVFPELAVTGYPPEDLVLRPSFLRDTTH 60 Query: 69 AIDTLKSDTHDGGAGIVVGFPRQDQ----------------EGVLNSVVILDAGNIIAVR 112 A+ L D +V G+ + + V N+ ++ ++A Sbjct: 61 ALQWLTKQCRD--LTVVAGYLEEGRVIRLRDSTPFVVPSGPRHVFNAAAVIHDRRVVATC 118 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICK-HLKKQGAEFL 171 K LPNY F E R F G + +R G+ ICEDIW + + GA + Sbjct: 119 QKTFLPNYGVFDESRYFSPGKQALVCQVQGMRFGVNICEDIWYAGGPTRDQVSVGGARLI 178 Query: 172 FSLNASPYY 180 ++NASPY+ Sbjct: 179 LNINASPYH 187 >gi|224024676|ref|ZP_03643042.1| hypothetical protein BACCOPRO_01404 [Bacteroides coprophilus DSM 18228] gi|224017898|gb|EEF75910.1| hypothetical protein BACCOPRO_01404 [Bacteroides coprophilus DSM 18228] Length = 643 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 122/558 (21%), Positives = 234/558 (41%), Gaps = 75/558 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N +A A+ +G+ +++F EL ++GY DL ++ ++ Sbjct: 6 VKVAAAIPTVKVADCKFNAQQAETQIAIADGKGVQIVVFPELNLTGYSCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T +VG P +LN V+ G I+ V K LPNY EF+ Sbjct: 66 QAELALMQIMNNTRQLDVISIVGMPVIVNSTLLNCAVVFQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFI--SGYSNDPIV----------------FRDIRLGILICEDIWKNSNICKHLKKQ 166 E+R F + + D +V D+ G+ ICED+W L + Sbjct: 126 EQRWFAPSTAHPEDTMVRLCGQLVPVSSNMLFETSDVCFGVEICEDVWAPVPPSSLLALK 185 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GAE +F+++A K + ++ Q + ++ + G+ +++F G ++ Sbjct: 186 GAEIIFNMSADTENICKHQYLRSLLAQQSARCLAGYVFASSGFGESTTDVVFAGNGLIYE 245 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS-ASTMYIPLQEEEADYNACVLSL 283 LA + + FS ++ + D + + +++ + A+++ + Q+ A +++ Sbjct: 246 NGTLLA-ESERFSFKDQLVVTEIDVERLRGERLTNTTFAASVRMHAQQPARRVTAEMVTG 304 Query: 284 RD-----YVQKNNF--------------------------------HKVIIGLSGGIDSA 306 RD YV+ + F V++G+SGG+DS Sbjct: 305 RDLMLTRYVEPHPFVPAGGALLDERCEEIFSIQVAGLAKRLVHTGCKTVVVGISGGLDST 364 Query: 307 LCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVN 360 L + V D LG ++ + I +P T+ ++ +A +L + I D + Sbjct: 365 LALLVCVKTFDKLGLSRKGIIGITMPGFGTTDRTYNNALTLMSSLQVTTKEISIKDACIQ 424 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 HF + + + EN Q+R R ILM +N +++ T + SE+++G+ T G Sbjct: 425 HFQDIGHDMSIHD---VTYENSQARERTQILMDYANKVGGLVIGTGDLSELALGWATYNG 481 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRP 475 D + + KT V L +W G+ + L + I P ++ +R Sbjct: 482 DHMSMYGVNASIPKTLVRYLVNWVAQTGVDVLSRNTLLDIIDTPISPELIPADEHGNIR- 540 Query: 476 HQTDQESLPPYPILDDII 493 Q ++ + PY + D I Sbjct: 541 -QKTEDLVGPYELHDFFI 557 >gi|13541848|ref|NP_111536.1| NAD synthetase [Thermoplasma volcanium GSS1] gi|25090781|sp|Q979W4|NADE_THEVO RecName: Full=NH(3)-dependent NAD(+) synthetase gi|14325284|dbj|BAB60188.1| NH(3) -depenent NAD + synthetase [Thermoplasma volcanium GSS1] Length = 242 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 27/239 (11%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K +IG+SGGIDS++ I EN++ + +P T +D A G KY Sbjct: 22 RKAVIGISGGIDSSVTLGILSKFFLHENIKAVFMPDATTPKSDYDDVDVLASTFGVKYST 81 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + I ++V+ F S+ L G + NI+SRIR +L +N +++ T+N++E+ Sbjct: 82 VNIQNIVDTF----SKTLSAVDKGAIG-NIKSRIRMIVLYYFANIYNGIVVGTTNRTELL 136 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +GY T YGD P++ LYK ++++A LG +P SI++K P+A Sbjct: 137 LGYYTKYGDGGCDVEPIEHLYKRDIYEIARL---------LG-----VPESIIKKKPTAG 182 Query: 473 LRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 L QTD++ + PY +DDI+ I + E + D ++ + + L S++KRR Sbjct: 183 LWQGQTDEDEIGMPYSKIDDILSSIFDKGE--LREDPDF-----KKILDLHSKSDHKRR 234 >gi|255010595|ref|ZP_05282721.1| NAD synthetase [Bacteroides fragilis 3_1_12] gi|313148405|ref|ZP_07810598.1| glutamine-dependent NAD+ synthetase [Bacteroides fragilis 3_1_12] gi|313137172|gb|EFR54532.1| glutamine-dependent NAD+ synthetase [Bacteroides fragilis 3_1_12] Length = 641 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 119/551 (21%), Positives = 220/551 (39%), Gaps = 69/551 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLIAIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T ++G P ++N+ V + G I+ V K LPNY EF+ Sbjct: 66 QAEMALMQILNNTRQLDIISILGMPVVVNSTIINAAVAIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S R + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSETSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWSTVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHSYLCSLISQQSARCLSGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE---EADY----- 276 LA + EQ ++E + ++ + +A+ P +E +Y Sbjct: 246 GGLLARSERFCLEEQLVISEIDVECIRAERRINTTFAANKANCPGKEAIRVSTEYTNSKD 305 Query: 277 --------------------NAC-------VLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 N C V L + ++G+SGG+DS L Sbjct: 306 LNLTRTFNPHPFVPQGAELNNRCEEIFSIQVAGLAQRLVHTGAKTAVVGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V D LG ++++ I +P T+ ++ +A A +LG + I + F Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIALMNSLGISIREISIREACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + L + EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 426 DIGHDLNVHD--VTYENSQARERTQILMDVANQICGLVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 + + KT V L W + + + L + I P ++ + E++ Q Sbjct: 484 MYGVNASIPKTLVQHLVQWVAENEVDGESKITLLDIVDTPISPELIPADENGEIK--QKT 541 Query: 480 QESLPPYPILD 490 ++ + PY + D Sbjct: 542 EDLVGPYELHD 552 >gi|332879220|ref|ZP_08446918.1| NAD+ synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682878|gb|EGJ55777.1| NAD+ synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 641 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 115/500 (23%), Positives = 199/500 (39%), Gaps = 64/500 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA A VGD N + +A +G+++I F EL I+ Y DL ++ + Sbjct: 6 VRIATAIPGVKVGDCKYNAQQIESLIIQAEGKGVEIICFPELSITAYTCGDLFAQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + ++ T ++G P +LN ++ G I+ + K LPNY EF+ Sbjct: 66 EAEMCLISILDFTRSLDIISIIGLPVAYHGTLLNCAAVIQKGKILGLIPKTYLPNYKEFY 125 Query: 125 EKRTFIS----GYSNDPIVFRDIRL-------------GILICEDIWKNSNICKHLKKQG 167 E+R F S G SN I + + L G+ ICED+W L QG Sbjct: 126 EQRWFTSGDVHGNSNVLICGQMVPLSRHLVFNTPSCCFGVEICEDVWAPIPPSSELVLQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K ++ Q + ++ G+ +++F G + ++ Sbjct: 186 AEIIFNLSADNEGVGKQDYLKALLAQQSARCLAGYVFSGAGFGESTQDVVFAGKALIYEN 245 Query: 226 QQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMSDDSASTM------------------- 265 LA + F EQ +E + ++ + SAS Sbjct: 246 GVLLAENERFSFKEQLVYSEIDVECLRAERRVNTTFSASVARLKSHDVIQIDTELFASKN 305 Query: 266 -----------YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P + E + + L + V+IG+SGG+DS L Sbjct: 306 IELSRKVNPMPFVPAGKALNGRCEEIFAIQIAGLAKRLVHTQTQTVVIGISGGLDSTLAL 365 Query: 310 AIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFF 363 + D LG ++ + + +P T+ ++ +A K+LG + I + HF Sbjct: 366 LVCTKTFDKLGLSRKGIVGVTMPGFGTTNRTYTNAVNLMKSLGVTLREISIKKACIQHFE 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 L + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 426 DLNFDMANHN---VTYENAQARERTQILMDVANQMNGMVVGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASW 443 + + KT V L W Sbjct: 483 SMYGVNASIPKTLVKHLVKW 502 >gi|303233648|ref|ZP_07320302.1| NAD+ synthase [Finegoldia magna BVS033A4] gi|302495082|gb|EFL54834.1| NAD+ synthase [Finegoldia magna BVS033A4] Length = 241 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 84/266 (31%), Positives = 134/266 (50%), Gaps = 42/266 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ N V+ G+SGGIDSA+ A + A G +N +++P K ++P+ EDA Sbjct: 14 IKEKVESANLKGVVFGISGGIDSAVLACLCKKAFG-DNALGLIMPIK-SNPKDEEDARIL 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK++G ++ + DL + +L+ F ++ + A NI+ R+R L + ++ M+ Sbjct: 72 AKSIGLRFTKV---DLNESYDALIGTF-EKNSVEMAASNIKPRLRMITLYYYAQNNGYMV 127 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L+ SN+SE GY T YGD PL +LYKT +F++A LG IP Sbjct: 128 LSGSNRSEFMTGYFTKYGDSGADLMPLLNLYKTDIFEMAKV---------LG-----IPD 173 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 I+ K PSA L QTD++ Y LDD + +NN N ++ ++ Sbjct: 174 VIINKKPSAGLWEGQTDEDEFGFTYEELDDYL----------MNNS---NTKSKDLIDKK 220 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDR 547 + SE+KR+ AKSF DR Sbjct: 221 IKQSEHKRK--------FAKSFEFDR 238 >gi|330837296|ref|YP_004411937.1| NAD+ synthetase [Spirochaeta coccoides DSM 17374] gi|329749199|gb|AEC02555.1| NAD+ synthetase [Spirochaeta coccoides DSM 17374] Length = 637 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 111/496 (22%), Positives = 205/496 (41%), Gaps = 63/496 (12%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 I++A ++P V D N + +A + A+ QG+ L++F EL ++GY DL + + + Sbjct: 6 ISVAAVSPAVKVADCTWNTRRIIQAMDAASSQGISLLVFPELSVTGYTCGDLFLQDALLA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A ++ + S + VVG P + + N V++ G+I+ V K N+PNY EF+ Sbjct: 66 AVQESLAAIVSHSTGIDTVAVVGAPLVWRNKLYNCAVVIHHGHILGVVPKTNIPNYQEFY 125 Query: 125 EKRTFISGYSN-DPIVF------------------RDIRLGILICEDIWKNSNICKHLKK 165 E R F D +V D + ICED+W Sbjct: 126 ELRWFAPAPDGIDTLVLAGQEVPFGTRLLFSCTSVTDFIFAVEICEDLWVPMPPSASHAM 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN------------------- 206 GA + +L+AS K R +V Q + + IY + Sbjct: 186 AGATVMVNLSASDEVVGKDGYRRNLVASQSARLACAYIYCDAGYGESTTDLVFTGHDLVA 245 Query: 207 --------QVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS 258 G D+L+ F +++ + ++ T + + Q++ + ++ Sbjct: 246 ENGHIVAEHEGKADQLLRTEVDVAFLARERRLLSTFPQTSGDYRTIF-FSQKIGE-TVLT 303 Query: 259 DDSASTMYIPLQEEE-ADYNACVLSLR--------DYVQKNNFHKVIIGLSGGIDSALCA 309 A ++P + + A +LSL+ ++ + + G + L + Sbjct: 304 RTVARYPFVPADSADLKERCAKILSLQAQGLAKRLEHTRSTGLVLGLSGGLDSTLALLVS 363 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 AVDALG ++N+ I +P T+ ++ +A AKA+G + + I V F + Sbjct: 364 IRAVDALGMSRKNILAISMPGFGTTKRTKGNATQLAKAMGVSFQSISIAAAVRRHFIDIG 423 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 Q + + EN Q+R R ILM ++N + +++ T + SE+++G+ T GD + Sbjct: 424 Q--DCDIHDVTYENSQARERTQILMDVANKNNMLVVGTGDLSELALGWATYNGDHMSMYG 481 Query: 428 PLKDLYKTQVFQLASW 443 + KT V L + Sbjct: 482 VNASIPKTLVRHLVRY 497 >gi|212694156|ref|ZP_03302284.1| hypothetical protein BACDOR_03682 [Bacteroides dorei DSM 17855] gi|237710209|ref|ZP_04540690.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 9_1_42FAA] gi|237727711|ref|ZP_04558192.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D4] gi|265751017|ref|ZP_06087080.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_33FAA] gi|212663376|gb|EEB23950.1| hypothetical protein BACDOR_03682 [Bacteroides dorei DSM 17855] gi|229434567|gb|EEO44644.1| glutamine-dependent NAD+ synthetase [Bacteroides dorei 5_1_36/D4] gi|229455671|gb|EEO61392.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 9_1_42FAA] gi|263237913|gb|EEZ23363.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_33FAA] Length = 641 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 106/472 (22%), Positives = 197/472 (41%), Gaps = 64/472 (13%) Query: 33 ANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 A+ +G+ +I+F EL I+GY DL + ++ A+ + ++T +VG P Sbjct: 34 ADGKGVQIIIFPELSITGYTCADLFGQSLLLEEAEMALMQIMNNTRQMDIVSIVGMPVVM 93 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS-----------NDPIVFR 141 +LNS V+ G I+ + K LPNY EF+E+R F S + N P+ Sbjct: 94 NSTLLNSAVVFQKGKILGIVPKTYLPNYKEFYEQRWFTSALNHPDGNVRLCGQNVPVSAN 153 Query: 142 ------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQI 195 + GI ICED+W L +GAE +F+++A K +V+ Q Sbjct: 154 LLFDTPETCFGIEICEDMWAPIPPSSALALKGAEIIFNMSADNEGIGKHNYVRSLVSQQS 213 Query: 196 SHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMK-HFSEQNFMTEWHYD---- 248 + ++ + G+ +++F G ++ L + F EQ ++E + Sbjct: 214 ARCLAGYVFSSSGFGESTTDVVFAGNGLIYENGTLLTESERFSFKEQLVISEIDVERLRG 273 Query: 249 QQLSQWNY--------------MSDDSASTM------------YIPLQEE-----EADYN 277 ++L+ + +S + +T ++P +E E + Sbjct: 274 ERLTNTTFAANIGNCPGRPAIHISTEFVNTRDLSLTRSIEAHPFVPQGKELDERCEEIFA 333 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN-----VQTIMLPYKYTS 332 + L + + V++G+SGG+DS L + K N + I +P T+ Sbjct: 334 IQIAGLAKRLVHTHCKTVVVGISGGLDSTLALLVCAKTFDKLNLPRKGIIGITMPGFGTT 393 Query: 333 PQSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 ++ +A +LG + I + + HF + + + EN Q+R R IL Sbjct: 394 DRTYNNALHLMASLGVTIKEISIKESCIQHFNDIDHDMTIHD---VTYENSQARERTQIL 450 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 M ++N +++ T + SE+++G+ T GD + + KT V L +W Sbjct: 451 MDVANQLSGLVIGTGDLSELALGWATYNGDHMSMYGVNGSIPKTLVKYLVNW 502 >gi|218884778|ref|YP_002429160.1| NAD+ synthetase [Desulfurococcus kamchatkensis 1221n] gi|218766394|gb|ACL11793.1| NAD+ synthetase [Desulfurococcus kamchatkensis 1221n] Length = 280 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 136/269 (50%), Gaps = 29/269 (10%) Query: 276 YNACVLSLRDYVQK----NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 ++ S+ D+++K + K IIGLSGG+DS++ + VDA+G + V +++P Sbjct: 18 FDVVARSIADFIEKYFNDSGAKKAIIGLSGGLDSSVTLRLLVDAVGSDRVIGVIMPDTRV 77 Query: 332 SP-QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 +P + ++DA ++ LG +Y ++PI D+VN + + + E+ S N+++RIR NI Sbjct: 78 TPTEDVDDAVELSRDLGVEYMIIPIDDVVNSYRVIPGFDVNEKLS---TGNLRARIRMNI 134 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L L+N +++ T ++SEI +GY T YGD P+ LYKTQV ++ + Sbjct: 135 LYYLANKLNGVVIGTGDRSEILLGYFTKYGDGGVDVLPIACLYKTQVKEMGRY------- 187 Query: 451 SGLGPLTEVIPPSILEKSPSAEL-RPHQTDQESLPPYPILD----DIIKRIVENEESFIN 505 LG +P I K S L R H ++E Y ++D +I + + EE+ Sbjct: 188 --LG-----LPVRITSKPSSPRLWRDHLAEEELGLSYNMVDLVFYSLIDKGLSTEEAVDA 240 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 N V L S +KRR P+ Sbjct: 241 TGLPLN--VFEKVLTLHRRSRHKRRLPPI 267 >gi|160943885|ref|ZP_02091115.1| hypothetical protein FAEPRAM212_01385 [Faecalibacterium prausnitzii M21/2] gi|158444561|gb|EDP21565.1| hypothetical protein FAEPRAM212_01385 [Faecalibacterium prausnitzii M21/2] Length = 642 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 106/461 (22%), Positives = 193/461 (41%), Gaps = 57/461 (12%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V D N + + A ++G+ L +F E ++GY DL +++ Q A++ L + Sbjct: 17 VADCTYNAQQVLAQLQAAAQRGVKLAVFPEFCLTGYTCGDLFLQRTLQQGALDALEWLLA 76 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS- 134 T ++VG P + N +L G ++ + K LPNY EF+EKR F G + Sbjct: 77 QTRALDTVVLVGLPLLVHGKLYNCAAVLCRGQLLGIVPKTYLPNYGEFYEKRQFTPGSTE 136 Query: 135 -------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 ++FR LG+ +CED+W GA + +L+A Sbjct: 137 VQTVTVCGQQVPFGTSLLFRCRQMPSFVLGVELCEDLWSALPPSTFHALAGATVIANLSA 196 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG--------------AS 220 S K + R +V Q + + +Y + G+ +++F G A Sbjct: 197 SDETVGKAEYRRALVANQSARLLCGYLYASAGHGESTTDMVFAGHDLIAEDGSILAETAP 256 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSDDSASTMYI---PLQEEEA 274 F D + + +E+ T + + + +++ +++ T I P + Sbjct: 257 FAGDHAETELDCQRMEAERARNTSFEHTAEGYITVEFDLTPEETVLTRRIDPAPFVPGDP 316 Query: 275 DYNACVLSLRDYVQKNNFHK---------VIIGLSGGIDSALCAAIAVDALGK-----EN 320 A L +Q + K +IG+SGG+DS L +AV A+ + + Sbjct: 317 QRRAARCELILKMQADGLAKRLEHAHAKTAVIGISGGLDSCLALLVAVRAMKQLHRSAAD 376 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 V + +P T+ ++ +A LG + + I D V F+ + Q E + E Sbjct: 377 VLAVTMPCFGTTKRTRSNAEILCGELGVSFQEIRIADTVRSHFADIGQ--DETVLDVTFE 434 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 N Q+R+R LM L+N + +++ T + SE+++G+ T GD Sbjct: 435 NGQARVRTLELMDLANRTGGLVVGTGDLSELALGWATYNGD 475 >gi|303232742|ref|ZP_07319427.1| NAD+ synthase [Atopobium vaginae PB189-T1-4] gi|302481228|gb|EFL44303.1| NAD+ synthase [Atopobium vaginae PB189-T1-4] Length = 650 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 115/528 (21%), Positives = 206/528 (39%), Gaps = 69/528 (13%) Query: 15 VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLK 74 V +I IA +A E + + +I+ EL +SGY D+ + + + +C + Sbjct: 20 VTANIDAIIADVTQAYEYDSAR---VIVLPELCVSGYSCGDMFLQAALLGSCEEGLQHFL 76 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY- 133 T A I +G P + N ++ G+I+ + K +P Y EF+E R F G+ Sbjct: 77 EQTAHIDALIALGCPVSYHSKLYNCAIVAHKGSILGIVPKRAIPTYDEFYELRHFSRGFD 136 Query: 134 ----------SNDPIVFRDI---------RLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 ++ P R I R+ + ICED+W + + GA + +L Sbjct: 137 TPVYIDFAGKTHIPFGIRQIFSCTSMPLLRVAVEICEDVWVANPPSSDHVRAGATLILNL 196 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQ 232 +A+P NK + R ++ Q + +Y + +++F + + LA + Sbjct: 197 SATPAQINKSRYRRSLIAQQSARCICGYVYACAPWSESTQDVVFSAHNMVAENGTILA-E 255 Query: 233 MKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTMYIPLQEEEADYNAC------- 279 FSE T+ ++ S + + Q+ E + C Sbjct: 256 SSGFSETPITTQIDLTSLDVQRRRTSTFEVFDPHMTNAPQYAYQQFELELEPCQLTRFID 315 Query: 280 ------------------VLSLRDY-VQKNNFH----KVIIGLSGGIDSALCAAIAVDAL 316 +LS++ + + K H +++GLSGG+DS L + V A Sbjct: 316 PHPFVPHDPSERAHRCEEILSIQAHGLAKRMLHTHAQTLVLGLSGGLDSTLALLVCVRAC 375 Query: 317 GKENVQ-----TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 +V + +P T+ ++ +AA A ALG + I V F+ + Sbjct: 376 ACIDVSPSAIIAVTMPGFGTTQRTHGNAAVLADALGATLREISIVAAVRQHFADIGH--S 433 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 EE + EN Q+R R ILM ++N +++ T + SE ++G+ T D + Sbjct: 434 EEDKDVTYENAQARERTQILMDIANQESGLVVGTGDLSEFALGWATYNADHMSMYAVNVG 493 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 + KT V + + + IL+ S EL P Q+D Sbjct: 494 VPKTLVRYVVQYEADRAAAGADTNGVYDVLLDILDTPVSPELLPAQSD 541 >gi|225165708|ref|ZP_03727506.1| NAD(+) synthase (glutamine-hydrolyzing) [Opitutaceae bacterium TAV2] gi|224800042|gb|EEG18473.1| NAD(+) synthase (glutamine-hydrolyzing) [Opitutaceae bacterium TAV2] Length = 197 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 91/196 (46%), Gaps = 13/196 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I IAQ+N VGD+AGN K A E +G L++F EL GYPP DL+FK F+ Sbjct: 1 MRIGIAQINTTVGDLAGNRRKILDAYAELVARGAQLVVFPELVTCGYPPRDLLFKSRFVP 60 Query: 65 ACSSAIDTLKSDTHDGGA--GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +++D + S D A G V P N+ G+++ + K LP Y Sbjct: 61 DTQASLDLIASAIGDTPALIGTVTPNPAPAGRPFFNAAAFCHRGHVLRIAHKCLLPTYDV 120 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----------NICKHLKKQGAEFL 171 F E R F S + +R+GI +CEDIW + N L G + + Sbjct: 121 FDEDRYFEPAPSPLIVEHAGLRIGITLCEDIWTHPALRTPRPLHHINPVALLAASGVDLM 180 Query: 172 FSLNASPYYHNKLKKR 187 +L+ASP+ K R Sbjct: 181 VNLSASPWQQEKETLR 196 >gi|329113857|ref|ZP_08242628.1| Glutamine-dependent NAD(+) synthetase [Acetobacter pomorum DM001] gi|326696867|gb|EGE48537.1| Glutamine-dependent NAD(+) synthetase [Acetobacter pomorum DM001] Length = 679 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 140/638 (21%), Positives = 252/638 (39%), Gaps = 111/638 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A L + + A N + + + G L +F EL + GY EDL+ +++ + Sbjct: 15 VRVAACTLPVALANPAINAQRILESAKACAADGTVLCVFPELGLCGYTLEDLLQQETLLA 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + +L + +VVG P + + N VI+ +G I+ V K +PNY EF+ Sbjct: 75 ETRTTLLSLAQASATLCPVLVVGAPLLWKNALYNCAVIIHSGKILGVVPKSYIPNYREFY 134 Query: 125 EKRTFISG----------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHL 163 E R F SG + D ++F L + ICED+W H Sbjct: 135 EARHFRSGADIRGQTIKINGHTVPFGVD-LLFEAQDVPSFSLSVEICEDMWVPIPPSAHA 193 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGA 219 GA + +L+AS K + R+ ++ +S ++ + Y+ G+ E L +DG Sbjct: 194 ALAGATIIANLSASDITVGKAETRN-MLCQSLSARNI-VAYLYAAAGEGESTTDLAWDGQ 251 Query: 220 SFCFDGQQQLA---------------FQMKHFSEQNFMTEWHYD--QQLSQWNYMS---- 258 + F+ LA + ++ D +Q W ++S Sbjct: 252 TAIFENGILLADSERFPSGATAVIADVDLTLLRQERLRMGSFADAARQADTWRHISFTLT 311 Query: 259 ---------DDSASTMYIPLQEEE------ADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 A ++P E + V +L+ ++ + ++IG+SGG+ Sbjct: 312 PPSANLGLKRPLARFPFVPAAPERLAQDCFEAFTIQVSALKQRLKTSGVKTMVIGISGGL 371 Query: 304 DSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L A A D LG + V+ +P T+ ++L A A L ++ L I Sbjct: 372 DSTHALLVAVRAADELGWPRSAVRGYTMPGFGTTDKTLASANALMSQLNITHETLDIRPA 431 Query: 359 VNHFF-SLMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 ++ + +P I EN+Q+ +R + L L+N +++ T + SE+++G+ Sbjct: 432 AELLLRTIRHPYADGQPVHDITFENVQAGLRTDFLFRLANQHHGIVIGTGDLSELALGWC 491 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILEKSPSAELR 474 T GD +N L KT + L W I SG P + +L S EL Sbjct: 492 TYGVGDQMAHYNVNAGLPKTLIQHLIRW----CIASGHFAPAVGKVLTDVLATEISPELI 547 Query: 475 P-----HQTDQESLPPYPILDDIIKRIVE-----NEESFI-------------------N 505 P Q+ + + PY + D + I+ + +F+ + Sbjct: 548 PVGKDGPQSTESIIGPYALHDFALFYILRYGFRPSRVAFLAEQAWQDASTGQWPPGFPAS 607 Query: 506 NDQEYNDETVR-----YVEHLLYGSEYKRRQAPVGTKI 538 + Y+ T+R +V S++KR P G K+ Sbjct: 608 EQKAYDLPTIRHWLEIFVRRFFATSQFKRSAMPNGPKV 645 >gi|315425346|dbj|BAJ47012.1| NH(3)-dependent NAD(+) synthetase [Candidatus Caldiarchaeum subterraneum] Length = 278 Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 75/269 (27%), Positives = 133/269 (49%), Gaps = 20/269 (7%) Query: 273 EADYNACVLSLRDYVQK----NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 + DY+A ++++++ + + +++GLSGG+DS++ AA+ A+ E + +++P Sbjct: 16 DIDYDATASAIQNFIAERLRLSGASGLVLGLSGGVDSSVVAALCARAVPGEKILGLIMPT 75 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +T Q + DA A A+ LG +PI +V + + + E + + N+++RIR Sbjct: 76 GFTPAQDVADAQALAEKLGISTRHIPIDPIVQRYAEQLGVGMDETGARMAYANLRARIRM 135 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +L +N +++ T ++SEI +GY T YGD P+ LYK+QV +L G Sbjct: 136 TLLYFHANLQNMLVVGTGDRSEILLGYYTKYGDGGVDILPIGGLYKSQVRRL-------G 188 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP-YPILDDIIKRIVENEESFIN-N 506 + GL P + K S +L P + LP Y ILD I+ + + + S Sbjct: 189 LALGL-------PEQLANKPSSPQLYPGHRAVDELPADYSILDPILYLLFDKKLSPQQVV 241 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 D+ ++ V V GS +KR P G Sbjct: 242 DKGFDKRVVDAVLARYVGSVHKREMPPTG 270 >gi|298247183|ref|ZP_06970988.1| NAD+ synthetase [Ktedonobacter racemifer DSM 44963] gi|297549842|gb|EFH83708.1| NAD+ synthetase [Ktedonobacter racemifer DSM 44963] Length = 672 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 134/625 (21%), Positives = 238/625 (38%), Gaps = 97/625 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L L++A+ V DI N A EA +G L LF EL I+GY DL ++ Sbjct: 27 LGFLRVAVVVPELRVADIRYNTQIIIDALREAAARGSRLALFPELCITGYTCADLFYQSV 86 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 +Q S A+ + + VVG P + N + G ++ + K LP+ + Sbjct: 87 LLQQASEALLAIAQAAAEAQIAAVVGLPMHLGGKLYNCAAFVSDGKVLGIVPKTYLPSTN 146 Query: 122 EFHEKRTFISG----------------YSNDPIV----FRDIRLGILICEDIWKNSNICK 161 E++E+R F S + D + F GI ICED+W Sbjct: 147 EYYEERWFSSAKDCPLSEIQLGGESIPFGTDLLFSANNFSGCMFGIEICEDLWAVQPPSG 206 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 + GA + + +AS K + R ++ Q + +Y G+ +++F G Sbjct: 207 SMVLAGATVILNPSASNEILGKTEYRRALIQQQAARCLAIYLYAGAGPGESTTDVVFSGG 266 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ----------------------------- 250 ++ + + LA + + F M D Q Sbjct: 267 AYINENGRMLA-ETERFLFSTQMAVADVDVQSMNHERLRNSSFSSALPDRTYRTLAFNLP 325 Query: 251 -----LSQWNYMSDDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGL 299 Q + +D T ++P + ++ + L ++ + I L Sbjct: 326 ERAGASEQTELLRNDLTPTPFVPADPSQRAKHCQEIFHLQSMGLAKRLKHTGIKNITIAL 385 Query: 300 SGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + A L +E + I +P T+ ++ +A A++LG +P Sbjct: 386 SGGLDSTLALLVVQQAFEILELPREGIVAITMPGFGTTNRTRSNAERLAESLGISLRQIP 445 Query: 355 IHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I D V F + + +P+ + EN Q+R R ILM + N + + T + SE++ Sbjct: 446 IRDAVLQHF----KDIGHDPNLHNVTYENAQARERTQILMDIGNQVGGLAVGTGDLSELA 501 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +G+ T D ++ + KT V L W + + SG +T + I S E Sbjct: 502 LGWCTYNADHMSMYHVNAGVPKTLVRYLIEW-CAESVYSG---VTSEVLHDINATPISPE 557 Query: 473 LRPH-------QTDQESLPPYPILDDIIKRIVENE-----------ESFINNDQEYND-E 513 L P Q + ++ PY + D + ++V + + F + Q E Sbjct: 558 LLPLGENDALVQETEATIGPYLLHDFFLFQVVRHGFTPRKVYWLACQVFAKHHQPAEVLE 617 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKI 538 ++ + +++KR P G K+ Sbjct: 618 WLKMFYQRFFAAQFKRSAMPDGPKV 642 >gi|254774553|ref|ZP_05216069.1| NAD synthetase [Mycobacterium avium subsp. avium ATCC 25291] Length = 680 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 119/545 (21%), Positives = 210/545 (38%), Gaps = 72/545 (13%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A V+GD A N R + L +F EL +SGY ED+V + + Sbjct: 13 RVAACTHRTVIGDPAANAESVLRLARACHDDSAALAVFPELTLSGYSIEDIVLQDLLLDD 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI + + + D +VVG P + + + N+ +++ G ++ V K LP Y EF+E Sbjct: 73 VEQAIAAIVAASADLLPVLVVGAPVRHRHRIYNAALVIHRGALLGVVPKSYLPTYREFYE 132 Query: 126 KRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKKQ 166 +R G V L + ICED++ Sbjct: 133 RRQIAPGDDERGTVRVAGLEAPFGPDLLFAASDLPGFVLHVEICEDMFVPIPPSAQAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +L+ SP + + R + S +Y G+ +L +DG + ++ Sbjct: 193 GATVLANLSGSPITIGRAEDRCLLARSASSRCLAAYVYSAAGEGESTTDLAWDGQTMVWE 252 Query: 225 GQQQLAFQMK-----HFSEQNFMTEWHYDQQLS-------------------QWNYMSDD 260 LA + S + TE ++L + + D Sbjct: 253 NGVLLAMSERFPKGERRSIADIDTELLRSERLRMGTFDDNRRHHRIASESFRRIEFRLDP 312 Query: 261 SASTM----------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGID 304 A + ++P E YN V L ++ ++ K++IG+SGG+D Sbjct: 313 PAGDIGLRREIERFPFVPADRERLQQDCFEAYNIQVAGLEQRLRALDYPKLVIGISGGLD 372 Query: 305 SALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S +A A+ +E ++ LP T ++ +A +ALG + + I + Sbjct: 373 STHALIVAARAMDREQRPRSDILAFTLPGFATGDRTKRNAIELCRALGVTFSEIDIRETA 432 Query: 360 NHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 M E+ + EN+Q+ +R + L L+N ++L TS+ SE+ +G+ T Sbjct: 433 QLMLKEMDHPFARGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTSDLSELGLGWST 492 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD +N + KT + L W S + P + S+L+ + EL P Sbjct: 493 YGVGDQMSHYNVNAGVPKTLIQHLIRWVIS---SEEFAPEVGAVLQSVLDTEITPELVPS 549 Query: 477 QTDQE 481 ++E Sbjct: 550 GEEEE 554 >gi|218283671|ref|ZP_03489632.1| hypothetical protein EUBIFOR_02226 [Eubacterium biforme DSM 3989] gi|218215660|gb|EEC89198.1| hypothetical protein EUBIFOR_02226 [Eubacterium biforme DSM 3989] Length = 634 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 119/475 (25%), Positives = 195/475 (41%), Gaps = 65/475 (13%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K A +GD N + + +E + L++F EL I+GY +DL ++ + + Sbjct: 8 KTAACTPEVFIGDPQANKEEILKCIQELDSD-TQLVVFPELCITGYTCQDLFYEHTLLNK 66 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + + + V+G P + + N I +I+ ++ K +P+Y+EF+E Sbjct: 67 AKQVLFEIVEELPENLVA-VLGLPLEIDNKLYNCAAICFNHDILGIQVKTYIPSYNEFYE 125 Query: 126 KRTFISG----------YSN------DPIVFRDIR----LGILICEDIWKNSNICKHLKK 165 R F S Y N + IVF+D LGI ICED+W + Sbjct: 126 TRWFSSASELKENTTFTYKNKKVPVSNHIVFKDTTTSACLGIEICEDLWVTIPVSSTHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ--VGGQDELIFDGASF-C 222 GA L +L+AS +K R +V Q + + IY + +L+F G + C Sbjct: 186 AGANILCNLSASNEIISKANYRRNLVKYQSAKCYAGYIYASAGPTESSSDLVFSGHNLIC 245 Query: 223 FDG-------QQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSDDSAST-------- 264 +G ++ + N HY Q L NY + D AS Sbjct: 246 ENGAILNETKTDKIIYGQIDLDHLNH-DRLHYKTSMQDLFHVNYTTVDFASKPIHEIEFN 304 Query: 265 ------MYIPLQEEEADYNACVLSLRDYVQ-------KNNFHKVIIGLSGGIDSALCAAI 311 ++P ++E C+ L Q K + V+IG+SGG+DS L + Sbjct: 305 RYIDAYPFVPNNQDER-ITRCLEILHIQAQGLATRLSKIHCKDVVIGISGGLDSTLALLV 363 Query: 312 AVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 +A N + I +P T+ ++ +A L + + I D VN F + Sbjct: 364 CHEAFKINNYDSKGIHAITMPGFGTTKRTKSNAQILMDLLHVSSEEISIVDGVNQHFKDI 423 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 E I EN Q+R R ILM LSN A+++ T + SE+++G+ T GD Sbjct: 424 HH--DPEVHNITYENSQARERTQILMDLSNAYNAIVVGTGDLSELALGWCTYNGD 476 >gi|282855633|ref|ZP_06264947.1| NAD+ synthetase [Pyramidobacter piscolens W5455] gi|282586563|gb|EFB91817.1| NAD+ synthetase [Pyramidobacter piscolens W5455] Length = 244 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 30/249 (12%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 + + ++GLSGGIDSA+ AA+ ALG E V T+ +P ++ P E A A+AL Sbjct: 19 ISASGAGGAVVGLSGGIDSAVAAALLKGALGTERVITVYMPC-HSIPLDGEHARLTAEAL 77 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G K + + + + + + + + EPS + NI+ R+R + +++ ++ T Sbjct: 78 GLKMLTVDLSETYDVYRRTIGRVM--EPSALAGANIKPRLRMITVYSIAQTLGYLVCGTG 135 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NK E++VGY T YGD F PL DL K +V +A +PP ++E Sbjct: 136 NKDELTVGYFTKYGDGGSDFMPLADLTKAEVRAIARETG--------------VPPPVIE 181 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGS 525 K PSA L QTD++ + Y +LD + + Q ++++ R +E S Sbjct: 182 KPPSAGLWEGQTDEQEMGLSYEVLDAYV------------SGQTIDEKSRREIERRKRIS 229 Query: 526 EYKRRQAPV 534 E+KR+ P+ Sbjct: 230 EHKRKMPPI 238 >gi|149184250|ref|ZP_01862568.1| hypothetical protein ED21_26068 [Erythrobacter sp. SD-21] gi|148831570|gb|EDL50003.1| hypothetical protein ED21_26068 [Erythrobacter sp. SD-21] Length = 687 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 145/646 (22%), Positives = 255/646 (39%), Gaps = 118/646 (18%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A D++ N +A+ +G+DL+L+ EL +S Y +DL + + ++ Sbjct: 18 VRVATATPTVRTADVSYNAEGILEQARKADERGVDLLLYPELCLSSYAIDDLHLQTAMLE 77 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + + +V+G P + + N +++ G ++ V K LPNY EF+ Sbjct: 78 AVERHLGVIVEASERLSPVVVIGAPLRRNGRIYNCAIVIARGQLLGVVPKSYLPNYREFY 137 Query: 125 EKRTFISG----------------YSNDPIVFRDIRL-----GILICEDIWKNSNICKHL 163 EKR F G + D +VF L GI ICED W + Sbjct: 138 EKRWFSHGRESVGLNISVDGATVPFGTD-LVFTAADLPGFIFGIEICEDFWSPNPPGTLA 196 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGA 219 GA L +L+AS K +RH + ++S Y G E L +DG Sbjct: 197 ALAGATILLNLSASNITIGKSDERHMLT--RVSSSRSVCAYAYSASGYGESTTDLAWDGQ 254 Query: 220 SFCF-----------------------DGQQQLAFQMK-----HFSEQNFMTEWHYDQQL 251 + D ++ LA +M+ +E E Y + + Sbjct: 255 GMIYELGDLLAESERFDRAPELCIADVDTRRILADRMRMQTWGDSAEAAGRPEDWYRRVV 314 Query: 252 SQWNYMSDDSASTM------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGL 299 + N D ++P ++E+ D +N V +L + ++IG+ Sbjct: 315 FKHNAGLRDIGLERPIRRFPFVPNRQEKLDEDCYEAFNIQVDALMRRIDATRSECLVIGV 374 Query: 300 SGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYD 351 SGG+DS L AA A+D +G + +++ +P TS + +A KA G + D Sbjct: 375 SGGLDSTHALLVAAKAMDRIGRPRSDIRGYTMPGFGTSKGTKSNAWKLMKAFGITAKEID 434 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + P ++ ++ F P EN+Q+ +R + L L++ ++ T + SE Sbjct: 435 IKPTATMM--LENIGHAFADGHPVYDTTFENVQAGLRTDYLFRLASQHGGWVIGTGDLSE 492 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W T + I +IL+ Sbjct: 493 LALGWCTYGVGDQMSHYAVNAGVPKTLIQYLIRWTTK---TRQFDEGVDEILLAILDTEI 549 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVENEES-----FI-------------- 504 S EL P Q+ Q + PY + D + I+ +S F+ Sbjct: 550 SPELVPAGEDGNIQSTQSIIGPYELNDFFLHHIIRWGQSPSHVAFLAWHAWKDAQKGLWP 609 Query: 505 -----NNDQEYNDETV-----RYVEHLLYGSEYKRRQAPVGTKITA 540 + EY+ T+ +VE S++KR P G K++A Sbjct: 610 IDFPDDARNEYDLATIAKWLENFVERFFGFSQFKRSALPNGPKVSA 655 >gi|258543692|ref|YP_003189125.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256634770|dbj|BAI00746.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256637826|dbj|BAI03795.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256640880|dbj|BAI06842.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256643935|dbj|BAI09890.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646990|dbj|BAI12938.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256650043|dbj|BAI15984.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256653033|dbj|BAI18967.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656087|dbj|BAI22014.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 677 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 140/642 (21%), Positives = 250/642 (38%), Gaps = 119/642 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + + A N + + + A G L +F EL + GY EDL+ +++ + Sbjct: 12 RVAACTLPVALANPAINAQRILESAKTAATDGAVLCVFPELGLCGYTLEDLLQQEALLAE 71 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + +L + A +VVG P + + N +++ +G I+ V K +PNY EF+E Sbjct: 72 TRKTLLSLAQASAALCAVLVVGAPLLWKNALYNCAIVIHSGKILGVVPKSYIPNYREFYE 131 Query: 126 KRTFISG----------------YSNDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 R F SG + D ++F L + ICED+W H Sbjct: 132 ARHFRSGADIRGQTIEINGHTVPFGVD-LLFEAEDVPSFCLSVEICEDMWVPIPPSAHAA 190 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K + R+ + + +Y G+ +L +DG + Sbjct: 191 LAGATIIANLSASDITVGKAETRNMLCQSLSARNIAAYLYAAAGEGESTTDLAWDGQTAI 250 Query: 223 FDGQQQLA-------------------------FQMKHFSEQNFMTE---WHYDQQLSQW 254 F+ LA +M F++ E W + + + Sbjct: 251 FENGTLLAASERFPSGATTVIADVDLTLLRQERLRMGSFADAAHQVETDAWRHIRFI--- 307 Query: 255 NYMSDDSAST---------MYIPLQEEE------ADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ SA+ ++P E + V +L+ ++ + ++IG+ Sbjct: 308 --LAPPSANLGLKRPLSRFPFVPAAPERLAQDCFEAFTIQVSALKQRLKTSGVKTMVIGI 365 Query: 300 SGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L A A D LG + V+ +P T+ ++L A A L ++ L Sbjct: 366 SGGLDSTHALLVAVRAADELGWPRSAVRGYTMPGFGTTNKTLASANALMAQLNITHETLD 425 Query: 355 IHDLVNHFFSLMSQ-FLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I M + +P I EN+Q+ +R + L L+N +++ T + SE++ Sbjct: 426 IRPAAELMLRTMRHPYADGQPVHDITFENVQAGLRTDFLFRLANQHHGIVIGTGDLSELA 485 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-LGPLTEVIPPSILEKSPS 470 +G+ T GD +N L KT + L W I SG P + +L S Sbjct: 486 LGWCTYGVGDQMAHYNVNAGLPKTLIQHLIRW----CIASGHFAPAVGKVLTDVLATEIS 541 Query: 471 AELRP-----HQTDQESLPPYPILDDIIKRIVE-----NEESFI---------------- 504 EL P Q+ + + PY + D + I+ + +F+ Sbjct: 542 PELIPVGENGPQSTESIIGPYALHDFALFYILRYGFSPSRVAFLAEQAWQDASTGQWPPG 601 Query: 505 ---NNDQEYNDETVR-----YVEHLLYGSEYKRRQAPVGTKI 538 + + Y+ T+R +V S++KR P G K+ Sbjct: 602 FPASEQKSYDLPTIRHWLEIFVRRFFATSQFKRSAMPNGPKV 643 >gi|330993009|ref|ZP_08316947.1| Glutamine-dependent NAD(+) synthetase [Gluconacetobacter sp. SXCC-1] gi|329759779|gb|EGG76285.1| Glutamine-dependent NAD(+) synthetase [Gluconacetobacter sp. SXCC-1] Length = 681 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 131/550 (23%), Positives = 211/550 (38%), Gaps = 81/550 (14%) Query: 19 IAGNIAKARRARE---EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 +A + ARR E ++ G L +F EL +SGY EDL + + A L Sbjct: 24 LADPMENARRIHEGIVACHQAGAVLAVFPELGLSGYAIEDLRQQDVLLDQVMEAAAWLAR 83 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--- 132 T ++VG P + + N + L G+I+ V K LPNY EF+E R F +G Sbjct: 84 QTAGLLPLVLVGAPVVWEGALYNCAIALHDGHIVGVIPKSYLPNYREFYEARQFTAGAGL 143 Query: 133 -------------YSNDPIV----FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + D + R + + +CED+W H GA + +L+ Sbjct: 144 RGGHIMLGARAVPFGTDLLFRARGVRGLVIAAELCEDMWVPQPPAVHAALAGATVIANLS 203 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLA--- 230 AS K + R + + +Y G+ ++ +DG + F+ LA Sbjct: 204 ASNITVGKARTRTLLCQSHSARCLCAYVYAAAGEGESTTDVAWDGQASIFENGVTLAQSA 263 Query: 231 -----------------FQMKHFSEQNFMTEWHYDQQLSQWNYM-------SDDSASTMY 266 + + F + ++W + S D Sbjct: 264 RFPTGLVTLLADVDLDLLRQERLRMGTFADNRAHVAAAAEWRSVELVLSPPSTDLGLKRA 323 Query: 267 IPL------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAI 311 IP Q+ + V +L+ V + ++IG+SGG+DS L AA Sbjct: 324 IPRFPFVPSDPALLDQDCYEAFTIQVTALKRRVLASRAKTLVIGVSGGLDSTHALLVAAR 383 Query: 312 AVD--ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A D LG++ V +P TS + ++A ALG + + I M Sbjct: 384 AADECGLGRQAVLGYTMPGFGTSGGTRDNAHELMAALGVQAHEIDIRPAARLMLEQMGHP 443 Query: 370 LQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGF 426 E + EN+Q+ +R + L L+N S +++ T + SE+++G+ T GD + Sbjct: 444 FAGGEAVYDVTFENVQAGLRTDFLFRLANQSGGIVIGTGDLSELALGWCTYGVGDQMAHY 503 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ-----E 481 N L KT + L W +HG + T + +IL S EL P Q E Sbjct: 504 NVNAGLPKTLIQHLIRWVMAHGRETA---RTCTVLDAILATEISPELVPATAGQAVQSTE 560 Query: 482 SL-PPYPILD 490 SL PY + D Sbjct: 561 SLIGPYALHD 570 >gi|302380335|ref|ZP_07268805.1| NAD+ synthase [Finegoldia magna ACS-171-V-Col3] gi|302311825|gb|EFK93836.1| NAD+ synthase [Finegoldia magna ACS-171-V-Col3] Length = 241 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 42/266 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ N + G+SGGIDSA+ A + A G +N +++P K ++P+ EDA Sbjct: 14 IKEEVESANLKGAVFGISGGIDSAVLACLCKKAFG-DNALGLIMPIK-SNPKDEEDARIL 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK++G ++ + DL + +L+ F ++ + A NI+ R+R L + ++ M+ Sbjct: 72 AKSIGLRFTKV---DLNESYDALIGTF-EKNSVEMAASNIKPRLRMITLYYYAQNNGYMV 127 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L+ SN+SE GY T YGD PL +LYKT +F++A LG IP Sbjct: 128 LSGSNRSEFMTGYFTKYGDSGADLMPLLNLYKTDIFEMAKV---------LG-----IPD 173 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 I+ K PSA L QTD++ Y LDD + +NN N ++ ++ Sbjct: 174 VIINKKPSAGLWEGQTDEDEFGFTYEELDDYL----------MNNS---NTKSKDLIDKK 220 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDR 547 + SE+KR+ AKSF DR Sbjct: 221 IKQSEHKRK--------FAKSFEFDR 238 >gi|167615693|ref|ZP_02384328.1| NAD synthetase [Burkholderia thailandensis Bt4] gi|257142226|ref|ZP_05590488.1| NAD synthetase [Burkholderia thailandensis E264] Length = 672 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 132/560 (23%), Positives = 225/560 (40%), Gaps = 94/560 (16%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V D A N ++ A +A R ++ EL +S Y +DL +++ + A +A+ + + Sbjct: 3 VADPAFNASRTIDAMRDAARAHALALVCPELGLSAYTCDDLFQQQALLDAGIAALGDVVA 62 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--Y 133 + D +VG P Q + N ++ G I A+ K L NY EF+E R F SG Sbjct: 63 ASRDLATIAIVGVPLQFGSTLYNCAAVVHRGRICAIVPKTYLANYREFYEARQFASGDAL 122 Query: 134 SNDPI-------------VFRDIRLGIL------ICEDIWKNSNICKHLKKQGAEFLFSL 174 + D + + +R L ICED+W + GA LF+L Sbjct: 123 ARDTVDLPMQSGIPCGSSLLFQVRARPLFTFHVEICEDLWVPVPPSSYAALAGATVLFNL 182 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQ 232 +AS K + R +V Q + Y G+ +L +DG F+ LA + Sbjct: 183 SASNATVAKAEYRRALVGNQSARCLAAYAYSGAGAGESTTDLAWDGHGMLFENGVLLA-E 241 Query: 233 MKHFSEQ------NFMTEWHYDQQLSQWNYM------SDDSASTMYIPLQEEEAD----- 275 + F+ + E +++ Q ++ + A+ IPL + D Sbjct: 242 ARRFAPTPQLVIADVDVERLASERMRQTSFAHAALRHRNACAAFRTIPLDADIDDGRMLP 301 Query: 276 -YNAC------------------------VLSLRDYVQKNNFHKVIIGLSGGIDSALC-- 308 AC V L + ++++G+SGG+DS L Sbjct: 302 LARACERFPYVPSDPAVRHGRCEEISEIQVQGLVTRMNAAGVDRLVLGVSGGLDSTLALL 361 Query: 309 -AAIAVDAL--GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY---DVLP-----IHD 357 A A DAL +++V LP TS ++ AA ALGC++ D+ P + D Sbjct: 362 VCARATDALRLPRDHVLACTLPGFATSARTAGQAARLINALGCRHIDIDIRPACMRMLRD 421 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 L + F +++ EN+Q+ +R + L L+N A+++ T + SE+++G+ T Sbjct: 422 LDHPFARAQARY------DATFENVQAGMRTDYLFRLANRHGALVVGTGDLSELALGWCT 475 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP------LTEVIPPSILEKSPS 470 GD + + KT V L W G +G L I P ++ Sbjct: 476 YGVGDQMSHYAVNASIPKTLVRYLVRWAAEQGPFAGAASPVLHDVLATTISPELIPG--D 533 Query: 471 AELRPHQTDQESLPPYPILD 490 A+ P Q + ++ P+ + D Sbjct: 534 ADTEPAQQSETAVGPFELQD 553 >gi|84488999|ref|YP_447231.1| hypothetical protein Msp_0170 [Methanosphaera stadtmanae DSM 3091] gi|84372318|gb|ABC56588.1| NadE [Methanosphaera stadtmanae DSM 3091] Length = 265 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 134/259 (51%), Gaps = 18/259 (6%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V ++N V+IGLSGGIDS + A +AV ALG V+ +LP TS Q L DA Sbjct: 20 IKEKVDESNSDGVVIGLSGGIDSCVVACLAVRALGPLRVRGYILPTITTSDQDLYDAKLI 79 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMS-QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 L + + + I + + F S + L ++ + N++ RIR +IL + ++ Sbjct: 80 KDELDIESEYISIGSIYDEFISSCEIKNLPQDNINLARGNLKPRIRMSILYYYATIYNSL 139 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ T NK+E+ VGY T +GD P+ DLYK V ++A LG +P Sbjct: 140 VIGTGNKTELQVGYFTKHGDGGVDLLPIGDLYKMDVKKVAQE---------LG-----VP 185 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESF--INNDQEYNDETVRYV 518 I++K P+A L QTD+E L Y ILD ++ +E E S I + E + V + Sbjct: 186 SLIIKKPPTAGLWEGQTDEEELGMTYNILDKLLYLYLEEEYSMPDIAKELEIPESEVERI 245 Query: 519 EHLLYGSEYKRRQAPVGTK 537 +++ + +KR + P+ +K Sbjct: 246 INMVNNASHKRNKIPILSK 264 >gi|169824591|ref|YP_001692202.1| NH(3)-dependent NAD synthetase [Finegoldia magna ATCC 29328] gi|238687755|sp|B0S1S2|NADE_FINM2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|167831396|dbj|BAG08312.1| NH(3)-dependent NAD synthetase [Finegoldia magna ATCC 29328] Length = 241 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 82/266 (30%), Positives = 133/266 (50%), Gaps = 42/266 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ N + G+SGGIDSA+ A + A G +N +++P K ++P+ EDA Sbjct: 14 IKEEVESANLKGAVFGISGGIDSAVLACLCKKAFG-DNALGLIMPIK-SNPKDEEDARIL 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK++G ++ + DL + +L+ F ++ + A NI+ R+R L + ++ M+ Sbjct: 72 AKSIGLRFTKV---DLNESYDALIGTF-EKNSVEMAASNIKPRLRMITLYYYAQNNGYMV 127 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L+ SN+SE GY T YGD PL +LYKT +F++A LG +P Sbjct: 128 LSGSNRSEFMTGYFTKYGDSGADLMPLLNLYKTDIFEMAKV---------LG-----VPD 173 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 I+ K PSA L QTD++ Y LDD + +NN N ++ ++ Sbjct: 174 VIINKKPSAGLWEGQTDEDEFGFTYEELDDYL----------MNNS---NTKSKDLIDKK 220 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDR 547 + SE+KR+ AKSF DR Sbjct: 221 IKQSEHKRK--------FAKSFEFDR 238 >gi|85374508|ref|YP_458570.1| NAD synthetase [Erythrobacter litoralis HTCC2594] gi|84787591|gb|ABC63773.1| hypothetical protein ELI_08405 [Erythrobacter litoralis HTCC2594] Length = 772 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 146/648 (22%), Positives = 249/648 (38%), Gaps = 124/648 (19%) Query: 7 IAIAQLNPVV--GDIA----GNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 I +A P V D+ G IA+AR+A + +DL+++ EL +S Y +DL + Sbjct: 103 IRVATATPAVRTADVPFNRDGIIAEARKAHDLE----VDLVVYPELCVSSYAIDDLHLQT 158 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + A +A+ + T D +++G P + + N + L G ++ V K LPNY Sbjct: 159 AMLDASEAAVGAIAQATRDLSPVLIIGAPLRRNGKIYNCALALSRGRVLGVVPKSFLPNY 218 Query: 121 SEFHEKRTFISG----------------YSNDPIV----FRDIRLGILICEDIWKNSNIC 160 EF+EKR F G + D I GI ICED W + Sbjct: 219 REFYEKRHFAHGRNCQGLEIALNGERMPFGTDLIFAAHDLPGFTFGIEICEDFWSPNPPG 278 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 A L +L+ASP + RH + Y G+ +L +DG Sbjct: 279 TLAALASATILANLSASPITIGRADDRHLHCRSSSARSICAYAYSASGFGESTTDLSWDG 338 Query: 219 ASFCF-----------------------DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW- 254 + D Q+ LA +M++ Q F ++ + W Sbjct: 339 QGVVYEMGELMKQSTRFDLDTELCAVDIDIQRILAERMRN---QTFSDAAEHEGRPEDWY 395 Query: 255 NYMSDDSAST-------------MYIPLQEEEAD------YNACVLSLRDYVQKNNFHKV 295 + A T ++P D +N V +L ++ + Sbjct: 396 RRIEFQHAGTGGDTGLMRPIRRFPFVPNNRATLDEDCYEAFNIQVDALMRRIKATGPKSL 455 Query: 296 IIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS + AA A D LG + ++ +P TS + +A +A+ Sbjct: 456 VIGISGGLDSTHALIVAAKACDRLGLPRTTIRGYTMPGFATSDYTKSNAWKLMQAMEITA 515 Query: 351 DVLPIHDLVNHFF-SLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + + I ++ F EP EN+Q+ +R + L L+ K ++ T + Sbjct: 516 EEIDIKPTARTMLENIGHAFADGEPVYDTTFENVQAGLRTDYLFRLAGQHKGFVVGTGDL 575 Query: 409 SEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 SE+++G+ T GD + + KT + L W T P + +IL+ Sbjct: 576 SELALGWCTYGVGDHMSHYGVNAGVPKTLIQYLIRWTIE---TEQFVPECSAVLGAILDT 632 Query: 468 SPSAELRPH------QTDQESLPPYPILDDIIKRIV-----------------------E 498 S EL P Q+ + ++ PY + D + IV E Sbjct: 633 EISPELVPAGEDGEIQSTESTIGPYELNDFFLHHIVRYGQSPSKVAFLAWHAWKDIEAGE 692 Query: 499 NEESFINNDQE-YNDETVR-YVEHLLYG----SEYKRRQAPVGTKITA 540 E F + + Y+ T+R ++E L+ S++KR P G K+++ Sbjct: 693 WPEGFPEDRKNAYDLATIRHWLEKFLWRFFQFSQFKRSALPNGPKVSS 740 >gi|164687547|ref|ZP_02211575.1| hypothetical protein CLOBAR_01188 [Clostridium bartlettii DSM 16795] gi|164603321|gb|EDQ96786.1| hypothetical protein CLOBAR_01188 [Clostridium bartlettii DSM 16795] Length = 665 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 123/517 (23%), Positives = 217/517 (41%), Gaps = 68/517 (13%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQ-ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN 98 ++++ EL ++GY DL + + I+ A + K + I +G P + + N Sbjct: 52 VVVYPELCVTGYTCHDLFNQHTLIKRAYDEMLRFAKLSNKEYSPLIFIGMPIRKDNQLFN 111 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS--NDPIV-------------FRDI 143 V + G II V K +PNYSEF+E R F S + +D IV D Sbjct: 112 CAVAIHKGEIIGVVPKTFIPNYSEFYEGRYFASSVNRVDDQIVIDGKTVPFTPNLLIEDT 171 Query: 144 RLGIL----ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVH 199 G + +CED+W KH GA + +L+AS K K R +++ Q + + Sbjct: 172 LTGAVVSAEVCEDVWVPIPPSKHHCLHGANIIVNLSASNETIGKSKYREDLIKMQSATSN 231 Query: 200 LPIIYVNQVGGQD--ELIFDGASFCFD-----GQQQLAFQMK--------------HFSE 238 +Y + G+ + +F G S D G+ + ++ Sbjct: 232 CGYVYASASRGESTTDTVFSGHSLIADCGAIVGESKFLEDIEITYGEIDIENCENDRTKT 291 Query: 239 QNFMTEWHYDQQ-----LSQWNYMSDDSASTMYI---PLQEEEADYNACVL------SLR 284 +FMT Y Q+ + + ++D+ S I P D A + L Sbjct: 292 TSFMTNV-YKQKYERVCIETFAPVTDEFISNREISILPFVPHNIDERATEILKLQAAGLA 350 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDA 339 ++K N V+IG+SGG+DS L +AV+A K+ + I +P T+ ++L +A Sbjct: 351 GRLKKINCESVVIGISGGLDSTLALIVAVEAFNINGYDKKGIHAITMPCYGTTDRTLNNA 410 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + L + I D + + + + EN+Q+R R ILM +SN Sbjct: 411 RRLMEILEVTSYEINIKDACEQHYKDIG--YDKSKLDVTFENVQARERTQILMDVSNKIG 468 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ-LASWRNSH-GITSGLGPLT 457 ++++ T + SE+++G+ T GD + + KT V L S+ H G+ L + Sbjct: 469 SLVVGTGDLSELALGWCTYNGDQMSMYGVNASIPKTLVRGILESYAEHHEGLKDVLLDIC 528 Query: 458 EV-IPPSILEKSPSAELRPHQTDQESLPPYPILDDII 493 + + P +L P+ + Q ++ + Y + D I+ Sbjct: 529 DTPVSPELL--PPNEDGTIKQKTEDKIGSYVVHDFIL 563 >gi|320100383|ref|YP_004175975.1| NH(3)-dependent NAD(+) synthetase [Desulfurococcus mucosus DSM 2162] gi|319752735|gb|ADV64493.1| NH(3)-dependent NAD(+) synthetase [Desulfurococcus mucosus DSM 2162] Length = 276 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 101/180 (56%), Gaps = 7/180 (3%) Query: 263 STMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ 322 S + IPL++ V L+ Y K ++GLSGG+DS++ + VDALG V Sbjct: 8 SLLSIPLEDAA---ETIVGFLKSYFAGAGAEKAVVGLSGGLDSSVTLRLLVDALGANKVT 64 Query: 323 TIMLP-YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 ++P + T P+ DAA A +LG +Y ++PI +V+ + S++ F + + + N Sbjct: 65 AAIMPDTRVTPPEDTRDAAELAGSLGVEYFIIPIDTVVDSY-SVIPGF--DAGNRLATGN 121 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++RIR NIL ++N +++ T ++SE+ +GY T YGD PL LYKTQV +L Sbjct: 122 LRARIRMNILYYIANRLNGIVVGTGDRSELLLGYFTKYGDGGVDVLPLACLYKTQVRELG 181 >gi|118464022|ref|YP_880964.1| NAD synthetase [Mycobacterium avium 104] gi|118165309|gb|ABK66206.1| glutamine-dependent NAD+ synthetase [Mycobacterium avium 104] Length = 680 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 118/545 (21%), Positives = 209/545 (38%), Gaps = 72/545 (13%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A V+GD A N R + L +F EL +SGY ED+V + + Sbjct: 13 RVAACTHRTVIGDPAANAESVLRLARACHDDSAALAVFPELTLSGYSIEDIVLQDLLLDD 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI + + + D +VVG P + + + N+ +++ G ++ V K LP Y EF+E Sbjct: 73 VEQAIAAIVAASADLLPVLVVGAPVRHRHRIYNAALVIHRGALLGVVPKSYLPTYREFYE 132 Query: 126 KRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKKQ 166 +R G V L + ICED++ Sbjct: 133 RRQIAPGDDERGTVRVAGLEAPFGPDLLFAASDLPGFVLHVEICEDMFVPIPPSAQAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +L+ SP + + R + S +Y G+ +L +DG + ++ Sbjct: 193 GATVLANLSGSPITIGRAEDRCLLARSASSRCLAAYVYSAAGEGESTTDLAWDGQTMVWE 252 Query: 225 GQQQLAFQMK-----HFSEQNFMTEWHYDQQLS-------------------QWNYMSDD 260 LA + S + TE ++L + + D Sbjct: 253 NGVLLAMSERFPKGERRSIADIDTELLRSERLRMGTFDDNRRHHRIASESFRRIEFRLDP 312 Query: 261 SASTM----------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGID 304 A + ++P E YN V L ++ ++ K++IG+SGG+D Sbjct: 313 PAGDIGLRREIERFPFVPADRERLQQDCFEAYNIQVAGLEQRLRALDYPKLVIGISGGLD 372 Query: 305 SALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S +A A+ +E ++ LP T ++ +A +ALG + + I + Sbjct: 373 STHALIVAARAMDREQRPRSDILAFTLPGFATGDRTKRNAIELCRALGVTFSEIDIRETA 432 Query: 360 NHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 M E+ + EN+Q+ +R + L L+N ++L T + SE+ +G+ T Sbjct: 433 QLMLKEMDHPFARGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELGLGWST 492 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD +N + KT + L W S + P + S+L+ + EL P Sbjct: 493 YGVGDQMSHYNVNAGVPKTLIQHLIRWVIS---SEEFAPEVGAVLQSVLDTEITPELVPS 549 Query: 477 QTDQE 481 ++E Sbjct: 550 GEEEE 554 >gi|48478058|ref|YP_023764.1| NAD synthetase [Picrophilus torridus DSM 9790] gi|73921197|sp|Q6L0D1|NADE_PICTO RecName: Full=NH(3)-dependent NAD(+) synthetase gi|48430706|gb|AAT43571.1| NAD synthase related protein [Picrophilus torridus DSM 9790] Length = 249 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 28/251 (11%) Query: 282 SLRDYV-QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 S+ D++ Q+ N +IG+S GIDSAL I A+ K+ + +P ++T +D Sbjct: 11 SISDFLRQELNGKNAVIGVSSGIDSALVLTILSKAIDKDRIHAFFMPDRFTRSADFDDIR 70 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 + + G K + + I ++VN + S + ++ G NI+SR+R IL +N Sbjct: 71 SLEGSTGVKINEINIENIVNGYKSTLG-INDKKYEG----NIRSRVRSVILYYNANLLNG 125 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +++ T+N++E +GY T YGD + P++ LYK+ V +LAS+ + Sbjct: 126 LVVGTTNRTEYLIGYFTKYGDGACDLEPIEHLYKSDVRELASYLK--------------V 171 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 P SI+ K PSA L Q D++ L Y LD I+K + E + + D+ + V Sbjct: 172 PESIIRKKPSAGLWGDQYDEDELGMGYEELDSILKDLFEKKTGIL-------DDRYKMVY 224 Query: 520 HLLYGSEYKRR 530 + S++KR+ Sbjct: 225 DMYIRSQHKRK 235 >gi|282162940|ref|YP_003355325.1| NH(3)-dependent NAD(+) synthetase [Methanocella paludicola SANAE] gi|282155254|dbj|BAI60342.1| NH(3)-dependent NAD(+) synthetase [Methanocella paludicola SANAE] Length = 268 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 85/271 (31%), Positives = 133/271 (49%), Gaps = 29/271 (10%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA---VDALGKENVQTIMLPYKYTS- 332 NA S+ V+ + + I+ LSGGIDSAL A +A VD G ++LP + TS Sbjct: 16 NAIEESIVRAVETSKMNGAILALSGGIDSALVAVLASRVVDVFG------LLLPDRATSD 69 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 P +EDA AK+LG Y+++ I +V +S +E + N++ R+R + Sbjct: 70 PGDMEDARDLAKSLGMDYELIEIGGIVEAVYSARPNLGPKECR-LAYANVKPRVRMIMNY 128 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 SN ++L T NK+E+ +GY T YGD P+ LYKT+V Q+A Sbjct: 129 FASNLDGRIVLGTGNKTELLMGYFTKYGDGGVDLLPIAGLYKTRVRQMAKHVG------- 181 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESF--INNDQE 509 +P +I++K PSA L QTD+ + Y LD I+ + + S+ I + Sbjct: 182 -------VPEAIIKKPPSAGLWKGQTDEGEMGISYEALDKILYGVYDLGLSYGEIQKETG 234 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 ++ T + + +E+KR P+ T ITA Sbjct: 235 VDEATFTRIMERVRDNEHKRNMPPI-TDITA 264 >gi|256005889|ref|ZP_05430836.1| NAD+ synthetase [Clostridium thermocellum DSM 2360] gi|255990158|gb|EEU00293.1| NAD+ synthetase [Clostridium thermocellum DSM 2360] Length = 557 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 122/534 (22%), Positives = 222/534 (41%), Gaps = 97/534 (18%) Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS---------------NDPIVF 140 + N V + G I+ V K +PNYSEF+E+R F SG + D ++F Sbjct: 9 LFNCAVAIQKGRILGVVPKTYVPNYSEFYEQRWFSSGRNALRDTIMLCGQEVPFGDDLLF 68 Query: 141 RDIR----LGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQIS 196 D + GI ICED+W GA +F+L+AS K + R E+ Q + Sbjct: 69 EDEKGEMCFGIEICEDLWVPVPPSSFQAMAGALVIFNLSASNEIVGKYEYRKELTRQQSA 128 Query: 197 HVHLPIIYVNQ---------VGGQDELIFDGASFCFDGQQQLAFQMKHFSE--------- 238 +Y + V G +IF+ S + ++ L + FSE Sbjct: 129 RCIAGYVYTSSGVDESTTDVVFGGHAMIFENGSLLCESERFLIDEQLIFSEIDIQKLMND 188 Query: 239 ----QNFMTEWHYD-QQLSQWNYMSDDSAS---TMYIPLQ-----EEEADYNAC------ 279 +FM W + ++ + + ++ + T Y+P + + C Sbjct: 189 RRKNTSFMELWRDNGREFRKVKFEIEEFEAENITRYVPPHPFVPSDGSSRDRRCSEIFAI 248 Query: 280 -VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSP 333 +L ++ + +IG+SGG+DS L + A + ++N+ I +P TS Sbjct: 249 QTSALAKRIRHTGLKRAVIGISGGLDSTLALLVTAKAFDLLNIPRKNILAITMPGFGTSD 308 Query: 334 QSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNI 390 + +A K++ + + I D + HF + + +PS I EN+Q+R R I Sbjct: 309 VTYTNAMEFMKSMDVEIREINIKDACLQHF-----KDIGHDPSIHDITYENVQARERTQI 363 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LM ++N +++ T + SE+++G+ T GD + + KT V L W + + Sbjct: 364 LMDIANKEGGLVIGTGDLSELALGWCTYNGDHMSMYAVNASIPKTLVSFLVRWVADNMLE 423 Query: 451 SGLGP-----LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDII-----------K 494 S L I P +L P A+ +Q ++ + PY + D + K Sbjct: 424 SKAKDVLYRILDTPISPELL--PPDAKGEINQKTEDIIGPYELHDFFLYHMLRYGAAPGK 481 Query: 495 RIVENEESFINNDQEYNDETVR-----YVEHLLYGSEYKRRQAPVGTKITAKSF 543 ++ +++F + +Y D+T++ +V+ + ++KR P G K+ S Sbjct: 482 ILILAKKAF---EGKYTDDTIKKWLKVFVKR-FFSQQFKRSCLPDGPKVGTISL 531 >gi|223040559|ref|ZP_03610831.1| NAD+ synthetase [Campylobacter rectus RM3267] gi|222878194|gb|EEF13303.1| NAD+ synthetase [Campylobacter rectus RM3267] Length = 264 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 132/255 (51%), Gaps = 23/255 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L Y++K+ ++G+SGGIDSA+ AA+ + +++P K++S ++L DA Sbjct: 30 LASYLEKSGAKGFVLGVSGGIDSAVVAALC--KCTGFDTHALLMPAKHSSERNLSDALKL 87 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 L + ++ I ++ F + + + L G N+ +R R +L S A++ Sbjct: 88 CSDLKITHKIIEIQPILESFVAQIGEPLPNLRMG----NLSARARMCLLYDYSARVNALV 143 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNKSE +GYGT+YGDM+ NP+ +L+KT++++LA LG I Sbjct: 144 VGTSNKSERMLGYGTIYGDMACALNPIGELFKTEIYELARE---------LG-----IDE 189 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 I+ K+PSA+L Q+D+ + Y LD+I++ E + ++++ + V V Sbjct: 190 KIIAKAPSADLWEGQSDEADIGYSYERLDEILRLAQSKSEDELA--RKFDPKLVATVFLK 247 Query: 522 LYGSEYKRRQAPVGT 536 + +++K PV + Sbjct: 248 MRANKFKLSLPPVAS 262 >gi|289523153|ref|ZP_06440007.1| NAD+ synthetase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503696|gb|EFD24860.1| NAD+ synthetase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 268 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 31/254 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD V++ ++ GLSGG+DS++ A +A DALG +N+ I++P + + P+ E+A Sbjct: 41 IRDKVEEAGVRGIVFGLSGGLDSSVLALLAKDALGYDNILGIVMPCE-SQPEDEENALLL 99 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ G + + N F ++ F +E + N++ R+R L + + ++ Sbjct: 100 AERCGVPVQKVDLTATFNSFIGILP-FEKEMMKPLAIANVKPRLRMTTLYFFAQNCGFLV 158 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 SNK E+ +GY T YGD P+ DL K +V LA LG +P Sbjct: 159 CGASNKDELELGYFTKYGDSGVDLLPMGDLLKGEVRLLADH---------LG-----VPA 204 Query: 463 SILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESFINNDQEYNDETVR-YVEH 520 I++++PSA L P Q D++ + Y D I R + E DE VR VE Sbjct: 205 PIIDRAPSAGLWPGQRDEDEIGASY----DAIDRYLATGE---------GDERVRDIVER 251 Query: 521 LLYGSEYKRRQAPV 534 SE+KRR P+ Sbjct: 252 ARRSSEHKRRMPPI 265 >gi|197105394|ref|YP_002130771.1| glutamine-dependent NAD(+) synthetase [Phenylobacterium zucineum HLK1] gi|196478814|gb|ACG78342.1| glutamine-dependent NAD(+) synthetase [Phenylobacterium zucineum HLK1] Length = 681 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 133/563 (23%), Positives = 219/563 (38%), Gaps = 81/563 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A VGD N A+ R E + +G DL+LF EL IS Y +DL+ + + ++ Sbjct: 14 VRVAACTPRVAVGDPGFNAAETLRMAHEGDARGCDLMLFPELGISAYAIDDLLLQDALLK 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L + + +VVG P + N V + G I+ V K LPNY E++ Sbjct: 74 RVEDEIAALAAASAKLSPVLVVGAPVARNGRLYNCAVAIARGRILGVVPKSYLPNYREYY 133 Query: 125 EKRTFISGYSNDPIV--------------------FRDIRLGILICEDIWKNSNICKHLK 164 EKR F G+ + + +D ICED W + Sbjct: 134 EKRWFAPGHGVEGLEVELAGQAAPFGTDLLFEASDLKDFVFHAEICEDFWAPAPPSTEGA 193 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K +R + Q + +Y G+ +L +DG + Sbjct: 194 LAGALILCNLSASNIVVGKADERALLCASQSARCSAAYLYSAAGPGESTTDLAWDGQASI 253 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI--------------- 267 + ++LA F + M D + + M + + I Sbjct: 254 HELGRELAC-TDRFPTEAQMAVADIDVEKLRLERMRSPTFNDAAIARGHPERRFRRVRFE 312 Query: 268 -----------------------PLQEEEADYNACVLSLRDYVQKNNFHK---VIIGLSG 301 P + ++ Y A + ++ V++ K ++IG+SG Sbjct: 313 HRPHGKDVGLLRPVDRFPFVPDDPARLDKDCYEAFNIQVQGLVKRLESTKSQHIVIGVSG 372 Query: 302 GIDSA---LCAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + AA A D LGK ++ +P TS + +A +ALG + + I Sbjct: 373 GLDSTHALIVAAKAFDRLGKPRSDILGFTMPGFATSEGTKSNAWKLMRALGVTAEEIDIR 432 Query: 357 DLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 M F EP + EN+Q+ +R + L L+N +L T + SE+++G Sbjct: 433 PAATQLLKDMGHPFAAGEPVYDVTFENVQAGLRTDYLFRLANQRHGFVLGTGDLSELALG 492 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W G T + S+L+ S EL Sbjct: 493 WCTYGVGDQMSHYNVNGSVAKTLIQHLIRWVAKTGQFDTAASETLL---SVLDTEISPEL 549 Query: 474 RPH------QTDQESLPPYPILD 490 P Q+ Q + PY + D Sbjct: 550 VPADASGAIQSTQAKIGPYELQD 572 >gi|120404894|ref|YP_954723.1| NAD synthetase [Mycobacterium vanbaalenii PYR-1] gi|119957712|gb|ABM14717.1| NAD+ synthetase [Mycobacterium vanbaalenii PYR-1] Length = 680 Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 121/569 (21%), Positives = 222/569 (39%), Gaps = 94/569 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + + D A N E + + L +F EL +SGY ED++ + + + Sbjct: 12 VRVAACTQHVAIADPAANAKSVLEVARECDADSVALAVFPELTLSGYSIEDILLQDALLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + + +VVG P + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVHEAVLEVAAGSAGMMTVLVVGAPLRFGHRIYNTAVVIHRGRVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIVFRDIRLG-----------------------ILICEDIWKNSNICK 161 E+R +G +D V +R+G + ICED++ Sbjct: 132 ERRQLAAG--DD--VCGTVRIGDVDAPFGPDLLFTATDVPGFVLHVEICEDMFVPIPPSA 187 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA L +L+ SP + R + S +Y G+ +L +DG Sbjct: 188 EAALAGATVLANLSGSPITIGRADDRKLLARSASSRCLAAYVYAAAGEGESTTDLAWDGQ 247 Query: 220 SFCFDGQQQLA-------------------------FQMKHFSEQNF----------MTE 244 + ++ LA +M F + E Sbjct: 248 TMIWENGVCLAESERFPEGVRRSVADVDLELLRAERLRMGTFDDNRVHHGITADGYRRVE 307 Query: 245 WHYD---------QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 + D +++ ++ ++ D + Q+ YN V L ++ KV Sbjct: 308 FRLDPPPGDIGLRREVERFPFVPSDPSRLQ----QDCYEAYNIQVSGLEQRLRAIGSPKV 363 Query: 296 IIGLSGGIDSA---LCAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS + AA A+D LG+ ++ LP T ++ +A + LG + Sbjct: 364 VIGVSGGLDSTHALIVAARAMDRLGRPRSDILAFTLPGFATGDRTKGNAVRLGETLGVTF 423 Query: 351 DVLPIHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I + + E+ + EN+Q+ +R + L L+N ++L T + Sbjct: 424 SEIDIRKTAELMLTEIEHPFARGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDL 483 Query: 409 SEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 SE+++G+ T GD +N + KT + L W S + + S+L+ Sbjct: 484 SELALGWSTYGVGDQMSHYNVNSGVPKTLIQHLIRWVIS---SDQFDKAVNEVLQSVLDT 540 Query: 468 SPSAELRPH------QTDQESLPPYPILD 490 S EL P Q+ Q+ + PY + D Sbjct: 541 EISPELVPAGEDEEIQSTQDKIGPYVLQD 569 >gi|332185259|ref|ZP_08387008.1| carbon-nitrogen hydrolase family protein [Sphingomonas sp. S17] gi|332014983|gb|EGI57039.1| carbon-nitrogen hydrolase family protein [Sphingomonas sp. S17] Length = 684 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 116/488 (23%), Positives = 200/488 (40%), Gaps = 76/488 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A VGD N A EA+ +G+DLI+F EL ++ Y +DL + + + Sbjct: 15 IRVAAATPAASVGDPHANAAAMLDLAREADEKGVDLIVFPELSLTSYAIDDLHLQSAMHR 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A A+ + + ++VG PR + + N+ +++ G I+ V K LPNY E Sbjct: 75 ATLDALGEMVDASAALSPVMLVGAALPRNGR--LYNTAIVIARGRILGVVPKTFLPNYRE 132 Query: 123 FHEKRTFISG----------------YSNDPIVFRDIRLGIL----ICEDIWKNSNICKH 162 ++EKR F SG + D I + G + ICED W + Sbjct: 133 YYEKRWFASGAGLVGLTIDLDGQSVPFGTDLIFAAEDLPGFVLHAEICEDYWAPTPPSTM 192 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA +L+AS K + R + Q + +Y G+ +L +DG Sbjct: 193 GALAGATICCNLSASNIVIGKARDRAMLAAAQSARAACAYVYSAAGIGESTTDLAWDGQG 252 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYD-----QQLSQWNYMSDDSAST----------- 264 + +QLA + + F+ +T D Q+ + +D +A Sbjct: 253 LIHELGEQLA-ESERFTRTPALTIADIDVERVVQERLRVGTFNDSAAFAGHPENRFRRIG 311 Query: 265 -------------------MYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGL 299 ++P D YN V +L ++ + ++IG+ Sbjct: 312 FIHGTEPADRGLCRPVERFPFVPNDPARRDADCYEAYNIQVEALAKRLEASQAKTLVIGV 371 Query: 300 SGGIDSA---LCAAIAVDAL--GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS + AA A D L G++ + +P T + A A +ALG + + Sbjct: 372 SGGLDSTHALIVAAKATDRLGWGRDRILAFTMPGFATGEGTKAHAWALMRALGVSAEEID 431 Query: 355 IHDLVNHFFS-LMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I + + F EP + EN+Q+ +R + L L+N ++L T + SE++ Sbjct: 432 IRPAAHQMLEDIRHPFAAGEPVHDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELA 491 Query: 413 VGYGTLYG 420 +G+ T YG Sbjct: 492 LGWCT-YG 498 >gi|298293691|ref|YP_003695630.1| NAD synthase [Starkeya novella DSM 506] gi|296930202|gb|ADH91011.1| NAD synthase [Starkeya novella DSM 506] Length = 680 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 135/547 (24%), Positives = 222/547 (40%), Gaps = 85/547 (15%) Query: 24 AKARRAREEANRQG----MDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHD 79 A A RA + QG + ++LF EL +S Y +DL+F+ + + +A+ + + + + Sbjct: 28 AFAARAHLDLAAQGHARHVGVMLFPELGLSSYAIDDLLFQDALLDRIEAALAEIAAASRE 87 Query: 80 GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS----- 134 +VVG P + + + N+ ++ G I+ K LPNY EF+E+R F G S Sbjct: 88 LYPVLVVGAPLRREGQLFNTAFVIHRGAILGAIPKSYLPNYREFYERRHFTPGLSEGGGT 147 Query: 135 ----------NDPIVFRD-----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 ++FR + ICEDIW GAE L +L+AS Sbjct: 148 VTVAGQEVPFGTDLLFRSQGDVAFTFHVEICEDIWVPLPPSTRAAMAGAELLLNLSASNI 207 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFS 237 K + R + Q + Y G+ +L +DG + F+ LA + + F Sbjct: 208 TIGKARHRRLLCASQSARCIAAYAYSAAGPGESTTDLAWDGQTAIFENGDALA-ESERFP 266 Query: 238 EQNFMTEWHYDQQLSQWNYMS-----------------------DDSASTM--------- 265 + +T D + + M D +T+ Sbjct: 267 TEPTLTAADIDLERLRQERMRTGTFGDCVRAEGVDGFRLVEFGLDRPQATVALERVIERF 326 Query: 266 -YIP-----LQEE--EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVD 314 Y+P L E+ EA YN V L + +IG+SGG+DS + AA A+D Sbjct: 327 PYVPADPARLAEDCYEA-YNIQVQGLAQRLAATGIAHAVIGVSGGLDSTQALIVAARAMD 385 Query: 315 ALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS-LMSQFLQ 371 LG + +V LP TS + +A A ALG + I + L F + Sbjct: 386 LLGRPRTDVLAYTLPGFATSDATRANALALIAALGVTGGEIDIRPAARQMLADLGHPFGR 445 Query: 372 EEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPL 429 EP + EN+Q+ +R + L L+N +++ T + SE+ +G+ T GD +N Sbjct: 446 GEPVYDVTFENVQAGLRTDYLFRLANQKGGLVVGTGDLSELGLGWCTYGVGDHMSHYNVN 505 Query: 430 KDLYKTQVFQLASWRNSHGITSGL------GPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + KT + L + + G S L I P ++ P A + Q+ Q+ + Sbjct: 506 ASVPKTLILHLIRFVAASGDVSAETVEVLNAVLATEISPELVPTEPGAVI---QSTQQIV 562 Query: 484 PPYPILD 490 PY + D Sbjct: 563 GPYALQD 569 >gi|88603839|ref|YP_504017.1| NAD+ synthetase [Methanospirillum hungatei JF-1] gi|88189301|gb|ABD42298.1| NH(3)-dependent NAD(+) synthetase [Methanospirillum hungatei JF-1] Length = 245 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 19/223 (8%) Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 D ++ + L+D + + +IGLSGGIDSA+ AA+ V A G + VQ LP T + Sbjct: 7 DPDSIITLLQDVLISGSSKGFVIGLSGGIDSAVAAALCVRAAGSDMVQGFFLPSAVTPSE 66 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 D A++L +PI +++ + M F + + + N+ +R R +L Sbjct: 67 DAADVRLLAESLHIPVMTIPIGPVIDQ-YRRMPDFTE---NSYLVGNLMARTRMTMLYYY 122 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +N ++ TSN +E +GY T +GD + P+ L KTQV+ LA + LG Sbjct: 123 ANQMNRLVCGTSNYTEYLLGYCTKFGDNAADVQPIMHLLKTQVWDLARY---------LG 173 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 +P ++EK+PSA L +QTD++ L PY ++D+ I + Sbjct: 174 -----LPQKVIEKTPSAGLWHNQTDEDELGMPYAVIDEAITNL 211 >gi|170290591|ref|YP_001737407.1| NAD+ synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174671|gb|ACB07724.1| NAD+ synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 262 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 128/254 (50%), Gaps = 20/254 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAA 341 +R V + +++G+SGG+DSA+ + VDALG E V ++LP +P+ ++DA Sbjct: 22 IRGMVAGSRAEGIVLGISGGVDSAVLTKLCVDALGSERVFGLILPDTRVTPEEDIKDAID 81 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A++L KY I D+++ + S+F + + N+++R+R ++L ++N + Sbjct: 82 LAESLKIKYWRRDIDDIIDSYER--SEFYVHDHK-LALGNLRARVRMSLLYYVANSRNLL 138 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 + + ++SEI +GY T YGD P+ DLYKTQV +A W LG +P Sbjct: 139 VAGSGDRSEILIGYFTKYGDGGADLLPIGDLYKTQVRWMAEW---------LG-----LP 184 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEH 520 I K S L Q ++ L PY +D I+ + + + +E+ + R +E Sbjct: 185 ERIARKPSSPRLWEGQMAEKELGIPYERIDLILHGLFDLRIDIDSLREEFGSDVDRVME- 243 Query: 521 LLYGSEYKRRQAPV 534 + S +KR P+ Sbjct: 244 MHSRSAHKRTMPPI 257 >gi|327399702|ref|YP_004340571.1| NAD(+) synthase [Hippea maritima DSM 10411] gi|327182331|gb|AEA34512.1| NAD(+) synthase (glutamine-hydrolyzing) [Hippea maritima DSM 10411] Length = 266 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 10/245 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAI Q++ V+GD+A N K + A + DLI+F EL SGY DLV++ S I Sbjct: 1 MKIAIGQIDTVLGDVAKNTTKIEHYIDMAIDKDCDLIVFPELATSGYGLRDLVYQAS-IS 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I ++ + + D IV+GF +++ NS GN+I + K LP+Y F Sbjct: 60 VNDKLIKSIATKSLD--IDIVIGFAQEENGYYFNSAAYFSNGNLIHIHKKNFLPDYGMFE 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G S + + +LICED + S+ CK + E L L+ASP++ + Sbjct: 118 EERYFTKGTSIETFKTKFGNTTMLICEDAFHVSSHCKAFFNR-TEVLIILSASPFWSDYK 176 Query: 185 KKRHEIVTGQISHVHLP-----IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + E+ IS + +++ N+ G +D + F G SF + Q E+ Sbjct: 177 SMKWEMWE-NISKTYTQLNSSFVVFANRTGFEDGVGFFGKSFIASPHGSIIKQASFLKEE 235 Query: 240 NFMTE 244 +T+ Sbjct: 236 LLITQ 240 >gi|77165560|ref|YP_344085.1| NAD synthetase [Nitrosococcus oceani ATCC 19707] gi|76883874|gb|ABA58555.1| NAD+ synthase [Nitrosococcus oceani ATCC 19707] Length = 714 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 130/566 (22%), Positives = 222/566 (39%), Gaps = 84/566 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D N K +A Q LI F EL +S Y +DL +++ + Sbjct: 16 IRAAVAVPELRVADPGFNAQKTMDLLGQAADQHSLLIAFPELGLSAYSCDDLFQQQALLD 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC + + + +VG P Q + + N + G ++ + K +PNY EF+ Sbjct: 76 ACQEGLRQILKYSEKLPLIGIVGLPLQVEHLLFNCAAVFYRGRLLGIVPKTYVPNYREFY 135 Query: 125 EKRTF------------ISGYSNDP----IVFRDIRLGIL-----ICEDIWKNSNICKHL 163 E R F + G P ++F+ +L ICED+W + Sbjct: 136 ELRQFAPADYALRERIDLCGQKEVPFGNRLLFQVAEQPLLTFYVEICEDLWSPIPPSSYA 195 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA L +L+AS K R + Q S +Y G+ +L +DG Sbjct: 196 ALAGATVLINLSASNITVGKDDYRRLLANSQSSRCLAAYLYTAAGTGESTTDLAWDGHGM 255 Query: 222 CFDGQQQLAFQMKHFS---------------EQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 ++ LA + + FS +Q+ M + + Q S+ + + + Sbjct: 256 MYENGDCLA-ETERFSYVSQLALGDIDLDRLQQDRMRQNSFGQTRSRHRDLLTSFQTIRF 314 Query: 267 ---------IPLQEE------------------EADYNACVLSLRDYVQKNNFHKVIIGL 299 +PL+ + Y+ L +Q KV+IG+ Sbjct: 315 SVPLPAQKPVPLKRAYERFPYVPSDPISRDRRCQEVYDIQTQGLVKRLQAAGVDKVVIGI 374 Query: 300 SGGIDSA----LCAAIA-VDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS +CA + + L + +V +P TS ++L A A+GC+ + Sbjct: 375 SGGLDSTQALIVCARVMDIMKLPRSHVLAYTMPGFATSKRTLSQARRLMAAVGCQAHEID 434 Query: 355 IH-DLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I + +L + Q EP + EN+Q+ R + L L+N +A+++ T + SE++ Sbjct: 435 IRPSCLQMLKNLGHPYAQGEPVYDVTFENVQAGERTSHLFRLANLHRALVVGTGDLSELA 494 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +G+ T GD ++ + KT + L W LGP I I S Sbjct: 495 LGWCTYGVGDHMSHYHVNASVPKTLIQYLIGWVAQ---KQQLGPEAGAILKEIRATDISP 551 Query: 472 EL-------RPHQTDQESLPPYPILD 490 EL +P Q +E + PY + D Sbjct: 552 ELIPQESKEQPGQRSEEVIGPYELQD 577 >gi|319934765|ref|ZP_08009210.1| NAD+ synthetase [Coprobacillus sp. 29_1] gi|319810142|gb|EFW06504.1| NAD+ synthetase [Coprobacillus sp. 29_1] Length = 635 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 129/609 (21%), Positives = 245/609 (40%), Gaps = 83/609 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ A + +G++ N + + +A+ + + ++LF EL ++GY EDL ++K + Sbjct: 6 VRVGCASFDMKLGNVKANADQIIKYAHKASEEHIKILLFPELCLTGYTIEDLFYQKRVLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + ++ + T++ +V+G P + N + L G I+ V K +P Y EF+ Sbjct: 66 EVTQQLEHILDATYELDLFMVIGAPFIHMNKLYNCAIALCGGEILGVIPKTYIPTYHEFY 125 Query: 125 EKRTFISG---------------YSNDPIVFRD-----IRLGILICEDIWKNSNICKHLK 164 E R F S + D I+F +++ + ICED+W Sbjct: 126 EGRHFASAPQECTEIMINGDYISFGTD-IIFESFHHEHLKIAVEICEDLWAPLPPSTKHC 184 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + + +AS +K R +V+ + + Y N G+ +++F Sbjct: 185 LNGATLILNPSASNDLTSKSDYRRLLVSSHSARLICGYAYCNAGLGESTTDVVFSNHHII 244 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST---MYIPLQ------EEE 273 + L ++ + ++ D+ +S+ MS +IP + E E Sbjct: 245 AENGTLLEESVQ-YETGLIYSDIDLDKLVSERIEMSTYETRNDHYHFIPFEIDTEDLELE 303 Query: 274 ADYNACVLSLRDYVQK---------------------NNFHKVIIGLSGGIDSALC---A 309 YN D Q+ + KV+IG+SGG+DS L A Sbjct: 304 RYYNPYPFVPSDTEQRAMRCKEVFDIQMHGLIQRLKAAHIQKVVIGISGGLDSTLALLVA 363 Query: 310 AIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 ++A LG +++ + +P T+ ++ +A + L + I V F + Sbjct: 364 SMAYKKLGYPSQDIIAVTMPCFGTTSRTKNNALKMMEELKVTSLTVDITAAVKQHFKDIH 423 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 E + EN Q+R R +LM ++N +++ T + SE+++G+ T GD + Sbjct: 424 H--DENVHDVTYENSQARERTQVLMDIANQEGGIVIGTGDLSEVALGWSTYNGDHMSMYA 481 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQE 481 + KT V L + + T G E + IL+ S EL P Q ++ Sbjct: 482 VNVSVPKTLVRYLVDYVS----TLYKGQPLESVLQDILDTPVSPELLPAKDNEIVQKTED 537 Query: 482 SLPPYPILDDIIKRIVENEE--------SFINNDQEYNDETVRYVEHLLY----GSEYKR 529 + PY + D + V + + ++Y+ ET++ L Y ++KR Sbjct: 538 IVGPYELHDFFLYHHVRFHYEPRKLYRIACLAYQEKYDQETIKKWLTLFYRRFFTQQFKR 597 Query: 530 RQAPVGTKI 538 P G K+ Sbjct: 598 SCIPDGPKV 606 >gi|254433686|ref|ZP_05047194.1| NAD synthase family [Nitrosococcus oceani AFC27] gi|207090019|gb|EDZ67290.1| NAD synthase family [Nitrosococcus oceani AFC27] Length = 742 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 130/566 (22%), Positives = 222/566 (39%), Gaps = 84/566 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D N K +A Q LI F EL +S Y +DL +++ + Sbjct: 44 IRAAVAVPELRVADPGFNAQKTMDLLGQAADQHSLLIAFPELGLSAYSCDDLFQQQALLD 103 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC + + + +VG P Q + + N + G ++ + K +PNY EF+ Sbjct: 104 ACQEGLRQILKYSEKLPLIGIVGLPLQVEHLLFNCAAVFYRGRLLGIVPKTYVPNYREFY 163 Query: 125 EKRTF------------ISGYSNDP----IVFRDIRLGIL-----ICEDIWKNSNICKHL 163 E R F + G P ++F+ +L ICED+W + Sbjct: 164 ELRQFAPADYALRERIDLCGQKEVPFGNRLLFQVAEQPLLTFYVEICEDLWSPIPPSSYA 223 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA L +L+AS K R + Q S +Y G+ +L +DG Sbjct: 224 ALAGATVLINLSASNITVGKDDYRRLLANSQSSRCLAAYLYTAAGTGESTTDLAWDGHGM 283 Query: 222 CFDGQQQLAFQMKHFS---------------EQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 ++ LA + + FS +Q+ M + + Q S+ + + + Sbjct: 284 MYENGDCLA-ETERFSYVSQLALGDIDLDRLQQDRMRQNSFGQTRSRHRDLLTSFQTIRF 342 Query: 267 ---------IPLQEE------------------EADYNACVLSLRDYVQKNNFHKVIIGL 299 +PL+ + Y+ L +Q KV+IG+ Sbjct: 343 SVPLPAQKPVPLKRAYERFPYVPSDPISRDRRCQEVYDIQTQGLVKRLQAAGVDKVVIGI 402 Query: 300 SGGIDSA----LCAAIA-VDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS +CA + + L + +V +P TS ++L A A+GC+ + Sbjct: 403 SGGLDSTQALIVCARVMDIMKLPRSHVLAYTMPGFATSKRTLSQARRLMAAVGCQAHEID 462 Query: 355 IH-DLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I + +L + Q EP + EN+Q+ R + L L+N +A+++ T + SE++ Sbjct: 463 IRPSCLQMLKNLGHPYAQGEPVYDVTFENVQAGERTSHLFRLANLHRALVVGTGDLSELA 522 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +G+ T GD ++ + KT + L W LGP I I S Sbjct: 523 LGWCTYGVGDHMSHYHVNASVPKTLIQYLIGWVAQ---KQQLGPEAGAILKEIRATDISP 579 Query: 472 EL-------RPHQTDQESLPPYPILD 490 EL +P Q +E + PY + D Sbjct: 580 ELIPQESKEQPGQRSEEVIGPYELQD 605 >gi|210632761|ref|ZP_03297531.1| hypothetical protein COLSTE_01434 [Collinsella stercoris DSM 13279] gi|210159395|gb|EEA90366.1| hypothetical protein COLSTE_01434 [Collinsella stercoris DSM 13279] Length = 716 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 34/256 (13%) Query: 5 LKIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 L+IA A VGD+ GN +A RRA +E G+ +++ EL ++GY DL + Sbjct: 21 LRIAAATPQIRVGDVKGNAEAILACVRRAADE----GVRVLVLPELCLTGYTCADLFHDR 76 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + ++AC +A+ L T VG P + GV N AG ++ + K +LPNY Sbjct: 77 ALLRACENALAWLLDKTSTVPVFFTVGMPYSNDAGVYNCAACCCAGQLLGMSVKSHLPNY 136 Query: 121 SEFHEKRTFISG-----YSNDPIVFR------------------DIRLGILICEDIW-KN 156 EF+E R F Y+ PI R D+ +G+ ICED+W N Sbjct: 137 REFYEGRWFSPAPSGPCYTTRPIAHRSVPFGAGLVYRCIDEGCSDVVIGVEICEDLWVPN 196 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--EL 214 + GA + +L+AS K R ++V GQ + ++ Y N G+ +L Sbjct: 197 PPSTAMALEGGATAILNLSASDEVIGKSAYRRDLVRGQSARLYCAYAYANAGEGESTTDL 256 Query: 215 IFDGASFCFDGQQQLA 230 +F G + + LA Sbjct: 257 VFAGENLIAENGSLLA 272 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 74/315 (23%), Positives = 131/315 (41%), Gaps = 42/315 (13%) Query: 264 TMYIPLQEE------EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV---D 314 T ++P E E +N L+ + +IGLSGG+DS L + V D Sbjct: 381 TPFVPAGETARAERCETIFNLQAAGLKTRLAHTFTKHAVIGLSGGLDSTLALLVTVRAFD 440 Query: 315 ALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 ALG + + + +P T+ ++ +A A+ LG + + I + V+ F+ + Sbjct: 441 ALGLPRSGIHAVSMPGFGTTSRTKSNAERLAEHLGVDFRTITIGEAVSRHFADIGH---- 496 Query: 373 EPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 +PS + EN Q+R R ILM LSN ++ T + SE+++G+ T D + Sbjct: 497 DPSVTDVTYENAQARERTQILMDLSNEVGGFVIGTGDLSELALGWATYNADHMSMYGVNA 556 Query: 431 DLYKTQVFQLASWR----NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPY 486 + KT V L ++ T+ L + P +L P+ + + Q +E + PY Sbjct: 557 GVPKTLVRHLVAYAADVFGGETATTLRDVLATPVSPELL--PPTGDGQIAQCTEELVGPY 614 Query: 487 PILDDIIKRIVENE-----------ESFINNDQE----YNDETVRYVEHLLY----GSEY 527 + D + ++ + +F + E Y T+ Y Y ++ Sbjct: 615 ELHDFFLYHMMRHGFAPGKIYRMACRAFAKPEGEGAPAYAPATILYWLRTFYRRFFAQQF 674 Query: 528 KRRQAPVGTKITAKS 542 KR P G K+ + S Sbjct: 675 KRSCLPDGPKVGSVS 689 >gi|32473835|ref|NP_866829.1| NAD synthetase [Rhodopirellula baltica SH 1] gi|32444371|emb|CAD74369.1| glutamine-dependent NAD(+) synthetase [Rhodopirellula baltica SH 1] Length = 703 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 22/232 (9%) Query: 9 IAQLNP--VVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKKSFIQA 65 IA ++P VV D A N A+ +A + +Q DLILF EL +S Y DL ++ + A Sbjct: 21 IAAVSPKVVVADPAANAAETIQAMDAVVQQSDPDLILFPELGLSAYTCGDLFATQTLLDA 80 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ T+ + +H A I+VG P + V+N ++ G I + K LPNY EF+E Sbjct: 81 SLDALRTIVTHSHSCDAAIIVGLPLRVGTSVMNVAALVRGGVIRGLVPKTFLPNYREFYE 140 Query: 126 KRTFISGYSNDPIVFRDIR-----------------LGILICEDIWKNSNICKHLKKQGA 168 R F + + DP R R LG+ ICED+W H GA Sbjct: 141 ARHFRAASATDPATVRIDRQDIPFGTDLLFQDGAATLGVEICEDLWVPVPPSSHAAIAGA 200 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ--DELIFDG 218 + +L+AS K + R ++V Q + Y + GG+ +L+F G Sbjct: 201 NVVVNLSASNELIGKAQWRRDLVVSQSGRLIAAYAYSSAGGGESTSDLVFGG 252 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 51/293 (17%) Query: 295 VIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + IG+SGG+DS L +AV A+ ++ + I++P T+ + + A + LG Sbjct: 399 LTIGISGGLDSTLALLVAVSAVDQLKRDRKVIDAIIMPGFGTTQHTNDSATQLVEGLGVT 458 Query: 350 YDVLPIHDLVNHFF-------------------SLMSQFLQEE--PSGIVAENIQSRIRG 388 + + I L F L S+ + + + + EN+Q+R+R Sbjct: 459 SESIDIRPLALRTFLDIGHSPLGLAIDVSTKIDDLQSRLQKVDVNATDLKFENVQARLRT 518 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +LM S+ +L T + SE ++G+ T GD +N + KT V L + H Sbjct: 519 MLLM-----SRGFVLGTGDLSEQALGWSTYNGDHMSMYNVNASVPKTLVRYLVQYAADHR 573 Query: 449 ITSGLGPLTEVIP-----PSILEKSPSAELRPHQTDQESLPPYPILD-----------DI 492 S L I P +L + E+R Q + S+ PY + D D+ Sbjct: 574 YRSSLHETLHRIADTPISPELLPPTEDGEIR--QNTEASIGPYELHDFFLYHFVRGGCDV 631 Query: 493 IKRIVENEESFIN--NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 K E++ + + E + T + + +++KR P G KI + S Sbjct: 632 AKMCFMAEQTKFDLPHSAELIEATAKTFVRRFFQNQFKRNCVPDGPKIGSVSL 684 >gi|327537486|gb|EGF24209.1| glutamine-dependent NAD+ synthetase [Rhodopirellula baltica WH47] Length = 703 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/232 (31%), Positives = 107/232 (46%), Gaps = 22/232 (9%) Query: 9 IAQLNP--VVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKKSFIQA 65 IA ++P VV D A N A+ +A + +Q DLILF EL +S Y DL ++ + A Sbjct: 21 IAAVSPKVVVADPAANAAETIQAMDAVVQQSDPDLILFPELGLSAYTCGDLFATQTLLDA 80 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ T+ + +H A I+VG P + V+N ++ G I + K LPNY EF+E Sbjct: 81 SLDALRTIATHSHSCDAAIIVGLPLRVGTSVMNVAALVRGGLIRGLVPKTFLPNYREFYE 140 Query: 126 KRTFISGYSNDPIVFRDIR-----------------LGILICEDIWKNSNICKHLKKQGA 168 R F + DP R R LG+ ICED+W H GA Sbjct: 141 ARHFREASATDPATVRIDRHDIPFGTDLLFQDGAATLGVEICEDLWVPVPPSSHAAIAGA 200 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ--DELIFDG 218 + +L+AS K + R ++V Q + Y + GG+ +L+F G Sbjct: 201 NVVVNLSASNELIGKAQWRRDLVVSQSGRLIAAYAYSSAGGGESTSDLVFGG 252 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 51/293 (17%) Query: 295 VIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + IG+SGG+DS L +AV A+ ++ + I++P T+ + + A + LG Sbjct: 399 LTIGISGGLDSTLALLVAVSAVDQLKRDRKVIDAIIMPGFGTTQHTNDSATQLVEGLGVT 458 Query: 350 YDVLPIHDLVNHFF-------------------SLMSQFLQEE--PSGIVAENIQSRIRG 388 + + I L F L S+ + + + + EN+Q+R+R Sbjct: 459 SESIDIRPLALRTFLDIGHSPLGLAIDVSTEIDDLQSRLQKVDVNATDLKFENVQARLRT 518 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +LM S+ +L T + SE ++G+ T GD +N + KT V L + H Sbjct: 519 MLLM-----SRGFVLGTGDLSEQALGWSTYNGDHMSMYNVNASVPKTLVRYLVQYAADHR 573 Query: 449 ITSGLGPLTEVIP-----PSILEKSPSAELRPHQTDQESLPPYPILD-----------DI 492 S L I P +L + E+R Q + S+ PY + D D+ Sbjct: 574 YRSSLHETLHRIADTPISPELLPPTEDGEIR--QNTEASIGPYELHDFFLYHFVRGGCDV 631 Query: 493 IKRIVENEESFIN--NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 K E++ + + E + T + + +++KR P G KI + S Sbjct: 632 AKMCFMAEQTKFDLPHSAELIEATAKTFVRRFFQNQFKRNCVPDGPKIGSVSL 684 >gi|124486171|ref|YP_001030787.1| NH(3)-dependent NAD(+) synthetase [Methanocorpusculum labreanum Z] gi|124363712|gb|ABN07520.1| NH(3)-dependent NAD(+) synthetase [Methanocorpusculum labreanum Z] Length = 251 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 18/201 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R V + N V+IG+SGGIDSA+ ++ AL E V + +P +PQ DA Sbjct: 20 IRQTVWEANARGVVIGISGGIDSAVACSLCCKALSPERVLGVNMPVSSNNPQDHLDAEEL 79 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + LG + +P+ D+ F L + + + P ++ NI +R+R L ++ K ++ Sbjct: 80 CRGLGVELITVPLEDVRAAF--LAAPHITDTP--VLRGNIAARLRMTTLYNITAARKYLV 135 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSNK+E +GY T +GD + PL L+K V+ LA LG +P Sbjct: 136 CGTSNKTEYMIGYSTKWGDSAADIQPLLHLWKKDVYLLA---------KELG-----VPE 181 Query: 463 SILEKSPSAELRPHQTDQESL 483 SI+ K+PSA Q+D+ L Sbjct: 182 SIIRKAPSAGFWEGQSDEGEL 202 >gi|323345332|ref|ZP_08085555.1| NAD synthetase [Prevotella oralis ATCC 33269] gi|323093446|gb|EFZ36024.1| NAD synthetase [Prevotella oralis ATCC 33269] Length = 677 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 22/257 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+ + +A +G+++I+F EL I+GY +DL ++ + Sbjct: 6 IKVASAVPAIRVADCKYNLEQVETLIVQAEGKGVEVIVFPELSITGYSCQDLFRQQVLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L T +VG P + +LN V++ G II + K LPNYSEF+ Sbjct: 66 AAEDAVFHLLDFTRQLDIVSIVGLPIVAGDLLLNCAVVIQQGQIIGIVPKTYLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVFR-------------------DIRLGILICEDIWKNSNICKHLKK 165 EKR F S P V R ++ G+ ICED+W HL Sbjct: 126 EKRWFASSQDLKPTVVRFAGQKIEITPEPQLFVTDDGVKFGVEICEDVWAPVPPSNHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K ++ Q + IY + G+ ++++ G + + Sbjct: 186 AGAELIFNLSASDELIGKHNYLMSVLAQQSARTMTGYIYSSSGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFSEQN 240 + LA Q K F+ +N Sbjct: 246 ENGHLLA-QGKRFALEN 261 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 13/191 (6%) Query: 294 KVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 KV+IG+SGG+DS L + V+ L ++ + + +P T+ ++ +A + + LG Sbjct: 374 KVVIGVSGGLDSTLALLVCVNTFDTLKLDRKGIIGVTMPGFGTTDRTYRNAISLMQRLGI 433 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I V F + + EN Q+R R ILM LSN +++ T + Sbjct: 434 TIREINIAKSVTQHFEDIGH--DATVHDVTYENSQARERTQILMDLSNQVGGLVVGTGDL 491 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE+++G+ T GD + + KT + L H + + +G +++++ I+E Sbjct: 492 SELALGWATYNGDHMSMYGVNAGIPKTLIRHLV-----HYVATLMGDVSDIL-ADIMETP 545 Query: 469 PSAELRPHQTD 479 S EL P D Sbjct: 546 ISPELIPADAD 556 >gi|332886264|gb|EGK06508.1| hypothetical protein HMPREF9456_00382 [Dysgonomonas mossii DSM 22836] Length = 662 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 123/558 (22%), Positives = 220/558 (39%), Gaps = 86/558 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + + +A + I+F EL I+ Y DL + ++ Sbjct: 7 VRVAAASPALKVADCDYNTDEIIKLINKAEGDNISAIVFPELSITAYTCGDLFLQSLLLE 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +++ + T + +VG P + N V++ G ++ K LPNY+EF+ Sbjct: 67 EALKSLNRICDATRNLSIVALVGLPIAVSNRLYNMAVVVSGGRVMGAVPKTFLPNYNEFY 126 Query: 125 EKRTFISGYS-----------NDPI----VFRD--IRLGILICEDIWKNSNICKHLKKQG 167 EKR F S + P+ VF+ I +CED+W G Sbjct: 127 EKRWFSSSEELKEKTITLCNRSVPVGVDLVFKTELFNFSIDVCEDLWTPIPPSSISCLNG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS----- 220 AE +F+L+AS K R +V+ Q + +Y G+ ++IF G+S Sbjct: 187 AEVIFNLSASNETTGKHLYRKSLVSQQSARCISGYVYAASGNGESTTDIIFAGSSMIAEN 246 Query: 221 ---------FCFDGQQQLA---------------------------------FQMKHFSE 238 F FD + +A F K+ Sbjct: 247 GSILAEGERFSFDSKVTVADIDIDRLRIDRLKNKSFSLSEYAAIKGIEFRDVFVSKNLIS 306 Query: 239 QNFMTEWHYDQQLSQWNY-MSDDSASTMYIP-----LQEE-EADYNACVLSLRDYVQKNN 291 ++ + D++ + Y + + T ++P L E E ++ V L + Sbjct: 307 KSISDKLGKDKKANIKKYGLRRFVSPTPFVPTNDGTLNERCEEIFSIQVSGLAKRMLHTK 366 Query: 292 FHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 K +IG+SGG+DS L + + +EN+ I +P T+ ++ +A ++L Sbjct: 367 IQKAVIGVSGGLDSTLALLVLAKTFDRLNIPRENIIGITMPGFGTTDRTYTNAIKLMQSL 426 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G + I D V F + + I EN Q+R R ILM +N +++ T Sbjct: 427 GTTIKEISIKDAVIQHFKDIEHDVNTH--DITYENSQARERTQILMDYANKVNGLVIGTG 484 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSIL 465 + SE+++G+ T GD + + KT V L W ++H + +++ + ++ Sbjct: 485 DLSELALGWCTYNGDHMSMYAVNTGIPKTLVRTLVGWIADTH-----MDEVSKAVLLDVM 539 Query: 466 EKSPSAELRPHQTDQESL 483 + S EL P + E L Sbjct: 540 DTPVSPELLPMDENGEIL 557 >gi|227500415|ref|ZP_03930477.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Anaerococcus tetradius ATCC 35098] gi|227217478|gb|EEI82797.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Anaerococcus tetradius ATCC 35098] Length = 600 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 129/596 (21%), Positives = 253/596 (42%), Gaps = 74/596 (12%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K +KI + +G+++ N+A + ++A++ G++++ EL ++G DL + Sbjct: 1 MKKNIKILSTNFDISLGNVSENLASIKDIIKKADKCGVNILSLPELCLTGASLYDLYKED 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I+ AI LK+ + D I +G P ++ + N+++ + G +I K NL Y Sbjct: 61 VLIERVKEAIIDLKAFSKDYDLLISLGAPLRENGKLYNTILFIKKGELITSFVKENLKAY 120 Query: 121 SEFHEKRTFIS--------GYSNDPI------VFRDIRLGILICEDIWKNSNICKHLKKQ 166 EK F S G S P+ IR+G++I ED K+ Sbjct: 121 ----EKNIFCSETPNYFSLGSSEVPVNMIYPAEISGIRIGVVIGEDERDAIATSLVFKEM 176 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 G + + + NA Y ++ + ++ IS++ ++YV+ G+ E D + G Sbjct: 177 GVDLILNPNA---YEKTVQSNRQSLS-DISYLSKGLVYVSSGAGRGESSTDS---VYQGL 229 Query: 227 QQLAFQMKHFSEQ-----NFMTEWHYDQQ----LSQWNYMSDDSASTMYIPLQEEEADYN 277 +A+ + + +F+ + D+ ++ + A Y+P + + ++ Sbjct: 230 NVIAYDGEIIESRVNDSVSFIKNFEIDENSPTAFKKFTDEKNKVAKFPYLPKEANKKEFV 289 Query: 278 ACVL-----SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLP 327 ++ +L ++K V +G+SGG+DS + +A L KE + +P Sbjct: 290 GDIMEIGSSALLSRMKKIGVEDVFLGVSGGLDSTMTLLFINEAYKKAGLPKEKIHAYTMP 349 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 TS ++ +A +ALG + I + V + + L+ + + EN Q+R R Sbjct: 350 AFATSKRTKSNAFYLCQALGIDLKEINISEAVKIHLANIGHDLKSQD--VAYENAQARER 407 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 +L+ L+N +++ T + SE G+ T GD ++ L KT + + ++ + Sbjct: 408 TQVLLDLANMYGGIVIGTGDLSECMQGFATFNGDHISNYSLNSSLTKTHLRFIVTYLAEN 467 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES------LPPYPILDDII-------- 493 L + + I+E S EL+ D+ S + PY ++D I Sbjct: 468 TDNDKLAKVLK----DIVETPISPELKNETDDKISQKTEDIIGPYELIDFFIYHHLKDKK 523 Query: 494 --KRIVENEESFINNDQEYNDETVR-----YVEHLLYGSEYKRRQAPVGTKITAKS 542 + I+ +S +D Y +E ++ Y + S++KR A G IT S Sbjct: 524 SPREILALAKSAFGDD--YKEEVIKKWLTSYFKRFA-ASQFKRATAVDGPNITGLS 576 >gi|307354724|ref|YP_003895775.1| NAD+ synthetase [Methanoplanus petrolearius DSM 11571] gi|307157957|gb|ADN37337.1| NAD+ synthetase [Methanoplanus petrolearius DSM 11571] Length = 248 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 19/228 (8%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +++IG+SGGIDSAL ++ A+G ENV LP T + ED G ++ Sbjct: 28 RIVIGISGGIDSALAGVLSSKAIGGENVYGYFLPSDVTPEKDKEDVEDLCNKFGINLAIV 87 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI ++ F ++ + G N+ RIR +L +N + ++ TSNK+E + Sbjct: 88 PISSILRSFETISGYTETKYLKG----NLMVRIRMTLLYYYANLNDGLVCGTSNKTEYIL 143 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY T +GD + PL LYKT V +LA +P +IL K PSA L Sbjct: 144 GYCTKHGDEAADIQPLLHLYKTDVRRLAKEAG--------------VPETILNKEPSAGL 189 Query: 474 RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEH 520 QTD++ + Y +D ++ + EN +E E V+ H Sbjct: 190 YTGQTDEDEIGFSYEEIDAALRSLEENGWRAAGKTEEDILEKVKNTAH 237 >gi|297564753|ref|YP_003683725.1| NAD+ synthetase [Meiothermus silvanus DSM 9946] gi|296849202|gb|ADH62217.1| NAD+ synthetase [Meiothermus silvanus DSM 9946] Length = 289 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 24/281 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ ++ F K ++ LSGG+DSA+ A+ V ALG +NV + +P+ + P+S E A Sbjct: 28 IREELEWRGFKKAVVALSGGVDSAVTLALGVQALGAKNVYAVYMPHAISRPESREHAELI 87 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A G ++V+ I +V + + + N +R R + + + Sbjct: 88 AGMYGVPFEVVDITGMVESYAAQVPDITPRRKG-----NAMARARTIVGFDKAEQYGGLH 142 Query: 403 LTTSNKSEISVGYGTLYGDM--SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 L T NK+E GY T + D+ +G NPL DLYKTQV+ LA + + Sbjct: 143 LGTGNKTERLFGYYTWH-DVADTGPINPLGDLYKTQVWGLAEYLE--------------L 187 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 P ++++K P+A+L QTD+ L Y D I++ ++ Y + V V+ Sbjct: 188 PEAVVKKPPTADLEIGQTDEGDLGIAYRRADVILEHYLKGYPDGYIVKLGYTEAEVARVK 247 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 L+ + +K R P I+ + G L P+ + +S Sbjct: 248 SLVNKTHWK-RTIPTVAVISTTAIGEFYLRPLDFRLELPVS 287 >gi|315652178|ref|ZP_07905175.1| NAD synthetase [Eubacterium saburreum DSM 3986] gi|315485573|gb|EFU75958.1| NAD synthetase [Eubacterium saburreum DSM 3986] Length = 636 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 126/613 (20%), Positives = 239/613 (38%), Gaps = 92/613 (15%) Query: 7 IAIAQLNP--VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A + P V D+A N ++A E +I+F EL ++GY DL F+ I Sbjct: 6 VRVASVTPDIKVCDVAYNKENIKKAIEIEWENKSKIIVFPELCLTGYTCNDLFFQDILIC 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + + I +G P + + N + G ++ +K++LPNY EF+ Sbjct: 66 EAKKALKEIVEFSAGHKSIIFIGLPLDFKGKLYNVAAAISDGALLGFINKLHLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R F G+ V F + + ICED+W + Sbjct: 126 EERYFNRGFEAPVWVDFFDMTVPMGANILFECLNFPGLTIAGEICEDLWVPNPPSVGHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +AS K R +++ + IY N G+ +L+F G Sbjct: 186 AGANVCINASASNDIVGKKAYRDALISNHSKKLICSYIYANAGEGESTQDLVFGGQGIIA 245 Query: 224 DGQQQLA------------------FQMKHFSEQNFMT-------EWHYDQQLSQWNYMS 258 + + LA ++ + F T + ++ + + N + Sbjct: 246 ENGKILAKSTGFKNEAVRIEIDINRLNLERRKQTTFKTVDDEGYFKAEFELDIEELN-LK 304 Query: 259 DDSASTMYIP----LQEEEADYNACV--LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + ++P + E D + L L+ + V++G+SGG+DS L + Sbjct: 305 RNFNPKPFVPNDTLKRNERCDEILTIQALGLKKRLVHTGIKNVVLGISGGLDSTLALLVC 364 Query: 313 VDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI-HDLVNHFFSLM 366 V L K ++ + +P T+ ++ ++A K+ + + I + HF + Sbjct: 365 VKTFEMLNLDKSGIKAVTMPGFGTTDRTYKNACELTKSFAASLEEISIVESIKRHFIDIK 424 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 ++ + EN Q+R R ILM ++N +++ T + SE+ +G+ T GD + Sbjct: 425 HDINVKD---VTYENAQARERTQILMDIANRDNGLVVGTGDLSELVLGWATYNGDHMSMY 481 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQ 480 + KT V L N + T G + ++ IL+ S EL P Q + Sbjct: 482 GVNASVPKTLVRHLV---NYYADTVGDKKIANIL-YDILDTPVSPELLPAEDGKIVQKTE 537 Query: 481 ESLPPYPILDDIIKRIVE-----------NEESFINNDQEYNDETV----RYVEHLLYGS 525 + + PY + D + ++ + +F D Y+ +TV + + Sbjct: 538 DLVGPYELHDFFLYNVLRFGFMPSKVYRMAKSAF---DTVYDADTVLKWLKVFYKRFFAQ 594 Query: 526 EYKRRQAPVGTKI 538 ++KR P G K+ Sbjct: 595 QFKRSALPDGPKV 607 >gi|297199222|ref|ZP_06916619.1| glutamine-dependent NAD+ synthetase [Streptomyces sviceus ATCC 29083] gi|197715050|gb|EDY59084.1| glutamine-dependent NAD+ synthetase [Streptomyces sviceus ATCC 29083] Length = 678 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 129/559 (23%), Positives = 217/559 (38%), Gaps = 78/559 (13%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V+ D N R + +G+ + +F EL + GY EDL+ + + + Sbjct: 16 RVAACTGHTVIADPPANAEAVLRHARRCSEEGVAVAVFPELGLCGYSIEDLLLQDALLDE 75 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ + + + D +VVG P + + V N VI+ G ++ V K PNY EF+E Sbjct: 76 VETALGDVVAGSADLLPLLVVGAPLRHRNRVYNCAVIVHRGRVLGVVPKSYPPNYREFYE 135 Query: 126 KRTFISGYSNDPIVFR----DIRLGI----------------LICEDIWKNSNICKHLKK 165 +R G R + G+ ICED+W Sbjct: 136 RRQIGDGADERGGSIRVGGASVPFGVDLLFEAGDVPGLVLHAEICEDMWVPVPPSAEAAL 195 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + S +Y G+ +L +DG + + Sbjct: 196 AGATVLVNLSGSPITVGRAEDRKLLCRSASSRCLAAYVYAAAGLGESTTDLSWDGQAMVY 255 Query: 224 DGQQQLAFQMKHFS---------------EQNFMTEWHYDQQLSQWNYMSDDSASTMY-- 266 + LA + + F Q M +D+ + D + + Sbjct: 256 ENGVLLA-ETERFPLGDEYAVADVDLDLLRQERMRMGTFDENRRAHRTRTGDFRTVSFEL 314 Query: 267 ---------------IPLQEEEAD---------YNACVLSLRDYVQKNNFHKVIIGLSGG 302 P +A+ YN V L+ + KV+IG+SGG Sbjct: 315 DPPAGDLGLKRRLERFPFVPADAERLAQDCYEAYNIQVAGLQQRLTAIGGPKVVIGVSGG 374 Query: 303 IDSA---LCAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS + AA A+D G+ ++ LP TS + ++A +ALG L I Sbjct: 375 LDSTHALIVAARAMDRAGRPRSDILAWTLPGFATSDHTKDNAHKLMRALGVTAAELDITP 434 Query: 358 LVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 M F EP + EN+Q+ +R + L L+N ++L T + SE+++G+ Sbjct: 435 TARLMLQEMDHPFASGEPVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELALGW 494 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S + T I +IL+ S EL Sbjct: 495 STYGVGDQMSHYNVNSGVPKTLMQHLIRWVIS---SEQFDEETGGILAAILDTEISPELV 551 Query: 475 P---HQTDQESLPPYPILD 490 P Q+ + + PY + D Sbjct: 552 PGEEMQSTESKIGPYALHD 570 >gi|256394350|ref|YP_003115914.1| NAD+ synthetase [Catenulispora acidiphila DSM 44928] gi|256360576|gb|ACU74073.1| NAD+ synthetase [Catenulispora acidiphila DSM 44928] Length = 680 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 125/566 (22%), Positives = 220/566 (38%), Gaps = 92/566 (16%) Query: 6 KIAIAQLNPVVGDIAGN----IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++A + V+ D N + ARR EE G+ + +F EL ++GY EDL+ + Sbjct: 13 RVAACTGHTVIADPRANGQAVLHLARRCAEE----GVAIAVFPELCLTGYSIEDLLLQDV 68 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + A+ + + T D +V G P + + + N V++ G ++ V K PNY Sbjct: 69 VLDEVEDAVQEIAAATADLLPVLVFGAPLRYRNRIYNCAVVVHRGRVLGVVPKSYPPNYR 128 Query: 122 EFHEKRTFISGYSND----PIVFRDIRLGI----------------LICEDIWKNSNICK 161 EF+E+R SG I + + G+ ICED+W Sbjct: 129 EFYERRQIASGEDERGGSITIAGQSVPFGVDVLFEAEDVPGLVLHAEICEDMWVPVPPSA 188 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA L +L+ SP + + R + + +Y G+ +L +DG Sbjct: 189 QAALAGATVLVNLSGSPITVGRAEDRRLLCRSASARCLAAYVYAAAGLGESSTDLSWDGQ 248 Query: 220 SFCFDGQQQLA-------------------------FQMKHFSEQNFMTEWHYDQQLSQW 254 + ++ LA +M F + + + + Sbjct: 249 TMIYENGALLAETGRFPLGDAVAVADVDLDLLRQERMRMGTFDDNRRANDGKTN-DFRRV 307 Query: 255 NYMSDDSASTMYI-------PLQEEEAD---------YNACVLSLRDYVQKNNFHKVIIG 298 ++ D ++ + + P + D YN V +L+ + KV+IG Sbjct: 308 GFLLDPPSADLGLRRAVERYPFVPADPDRLALDCYEAYNIQVTALQQRLAAIGGPKVVIG 367 Query: 299 LSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS + AA A+D G + ++ +P T + +A ++LG L Sbjct: 368 VSGGLDSTHALIVAARAMDRAGRPRSDILAFTMPGFATGEHTKGNAHKLMRSLGVTAAEL 427 Query: 354 PIHDLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I M F EP + EN+Q+ +R + L L+N ++L T + SE+ Sbjct: 428 DITSTARLMLKEMDHPFGSGEPVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSEL 487 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS---ILEK 467 ++G+ T GD +N + K+ + L W G G E + IL+ Sbjct: 488 ALGWCTYGVGDQMSHYNVNSGVPKSLIQHLIRW------VVGSGQFDEETGQTLLAILDT 541 Query: 468 SPSAELRPH---QTDQESLPPYPILD 490 S EL P Q+ ++ + PY + D Sbjct: 542 EISPELVPGEELQSTEDKIGPYALHD 567 >gi|41408356|ref|NP_961192.1| NAD synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396712|gb|AAS04575.1| hypothetical protein MAP_2258c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 680 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 117/545 (21%), Positives = 208/545 (38%), Gaps = 72/545 (13%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A V+GD A N R + L +F EL +SGY ED+V + + Sbjct: 13 RVAACTHRTVIGDPAANAESVLRLARACHDDSAALAVFPELTLSGYSIEDIVLQDLLLDD 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI + + + D +VVG P + + + N+ +++ G ++ V K LP Y EF+E Sbjct: 73 VEQAIAAIVAASADLLPVLVVGAPVRHRHRIYNAALVIHRGALLGVVPKSYLPTYREFYE 132 Query: 126 KRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKKQ 166 +R G V L + I ED++ Sbjct: 133 RRQIAPGDDERGTVRVAGLEAPFGPDLLFAASDLPGFVLHVEISEDMFVPIPPSAQAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +L+ SP + + R + S +Y G+ +L +DG + ++ Sbjct: 193 GATVLANLSGSPITIGRAEDRCLLARSASSRCLAAYVYSAAGEGESTTDLAWDGQTMVWE 252 Query: 225 GQQQLAFQMK-----HFSEQNFMTEWHYDQQLS-------------------QWNYMSDD 260 LA + S + TE ++L + + D Sbjct: 253 NGVLLAMSERFPKGERRSIADIDTELLRSERLRMGTFDDNRRHHRIASESFRRIEFRLDP 312 Query: 261 SASTM----------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGID 304 A + ++P E YN V L ++ ++ K++IG+SGG+D Sbjct: 313 PAGDIGLRREIERFPFVPADRERLQQDCFEAYNIQVAGLEQRLRALDYPKLVIGISGGLD 372 Query: 305 SALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S +A A+ +E ++ LP T ++ +A +ALG + + I + Sbjct: 373 STHALIVAARAMDREQRPRSDILAFTLPGFATGDRTKRNAIELCRALGVTFSEIDIRETA 432 Query: 360 NHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 M E+ + EN+Q+ +R + L L+N ++L T + SE+ +G+ T Sbjct: 433 QLMLKEMDHPFARGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELGLGWST 492 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD +N + KT + L W S + P + S+L+ + EL P Sbjct: 493 YGVGDQMSHYNVNAGVPKTLIQHLIRWVIS---SEEFAPEVGAVLQSVLDTEITPELVPS 549 Query: 477 QTDQE 481 ++E Sbjct: 550 GEEEE 554 >gi|257066019|ref|YP_003152275.1| NAD+ synthetase [Anaerococcus prevotii DSM 20548] gi|256797899|gb|ACV28554.1| NAD+ synthetase [Anaerococcus prevotii DSM 20548] Length = 600 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 134/590 (22%), Positives = 245/590 (41%), Gaps = 62/590 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K +KI + +G + N+ K + + A ++G+++I EL ++G DL ++ Sbjct: 1 MKKNIKILATNFDLELGQVGKNLEKIKNIVKNAEKEGVNIISLPELALTGASLYDLYKEE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I+ A+ L + I +G P + + + N+++ + G I+ K L NY Sbjct: 61 VLIKRVEEALVDLIDFSKAYDLLISLGAPLRSEGKLYNTIIFIKKGEILTSFVKEELKNY 120 Query: 121 SEF---HEKRTFISGYSND-------PIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 + E + + S D P+ +++G+ I ED NS K +GA+ Sbjct: 121 EKMIFSTETPNYFTLGSCDFPADIISPVEVGGLKIGVAIGEDERTNSPSSLFFKDRGADI 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQ 226 + LN + Y L I G I + +YV+ G+ E +F G + D Sbjct: 181 I--LNPNAYEKQALSIDKTI--GDIKFLSKNTVYVSTGTGKGESSTDTVFQGLNLIADDG 236 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQL-SQWNYMSDDSAST---MYIPLQEEEADYNACVL- 281 + ++ +K ++ ++ D+ S +N +D+ Y+P +E+E + VL Sbjct: 237 KLIS--VKENEGVSYTKDFDLDENSPSSFNNFTDEKIEVDKFPYLPKKEDEDIFVRDVLE 294 Query: 282 ----SLRDYVQKNNFHKVIIGLSGGIDSA-----LCAAIAVDALGKENVQTIMLPYKYTS 332 +L ++K IG+SGG+DS L A + KE + +P TS Sbjct: 295 IASSALLTRMRKIGVEDTFIGVSGGLDSTMALIFLTYAYKKAGISKEKIHAYTMPAFATS 354 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 ++ +A +ALG K + I + V + + L+ + + EN Q+R R +L+ Sbjct: 355 KRTKFNAYILCEALGIKLTEIDISEAVKVHLADIGHDLESQDTAY--ENAQARERTQVLL 412 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 L+N +++ T + SE G+ T GD + L KT + + + Sbjct: 413 DLANMYGGIVIGTGDLSECMQGFATFNGDHISNYALNATLTKTHLRFIVGHIAENTENKD 472 Query: 453 LGPLTEVIPPSILEKSPSAELRPH------QTDQESLPPYPILDDII----------KRI 496 LG + + I++ S EL+ Q ++ + PY ++D I K I Sbjct: 473 LGKVLK----DIIDTPISPELKSEDKGTISQKTEDIIGPYELIDFFIYHHLKYHRRPKEI 528 Query: 497 VENEESFINNDQEYNDETVR--YVEHL--LYGSEYKRRQAPVGTKITAKS 542 + +D Y DE ++ V + S++KR A G IT S Sbjct: 529 YDLARLAFRDD--YEDEVIKKWLVSYFKRFSASQFKRATAVDGPNITGLS 576 >gi|76802549|ref|YP_327557.1| NAD synthetase [Natronomonas pharaonis DSM 2160] gi|76558414|emb|CAI50005.1| NAD(+) synthase (glutamine-hydrolyzing) 1 [Natronomonas pharaonis DSM 2160] Length = 275 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 16/201 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 + + ++ + ++GLSGGIDS A +AV ALG + V I +P DA Sbjct: 33 IEETIETAGADRAVLGLSGGIDSTTVAYLAVAALGPDRVHGISMPSSVNPDDDETDAERV 92 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A AL ++DV+ I+ +V+ F ++ + N++ R R + ++N ++ Sbjct: 93 ANALDIEFDVIDINPIVDAFVDAAPDHAADDRMAL--GNVRVRTRAVLNYFVANAEDGLV 150 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T N+SE + GY T YGD + NP+ +LYK QV QLA LG +P Sbjct: 151 LGTGNRSEAATGYFTKYGDQAVDCNPIGNLYKCQVRQLARE---------LG-----VPE 196 Query: 463 SILEKSPSAELRPHQTDQESL 483 ++ ++P+A + QTD+E + Sbjct: 197 DLVSRTPTAAMWEGQTDEEEM 217 >gi|83859884|ref|ZP_00953404.1| NAD(+) synthetase [Oceanicaulis alexandrii HTCC2633] gi|83852243|gb|EAP90097.1| NAD(+) synthetase [Oceanicaulis alexandrii HTCC2633] Length = 685 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 119/549 (21%), Positives = 218/549 (39%), Gaps = 85/549 (15%) Query: 31 EEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPR 90 +A+ + + LF EL ++GY +DL + + + A +A + + I G Sbjct: 39 RQAHERHAAVCLFPELGLTGYSVDDLHHQTALLDAAENAAARIIEASEGLRPLIFFGCAL 98 Query: 91 QDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF----------------ISGYS 134 + + N + + G ++ V K LPNY EF+EKR F I+ + Sbjct: 99 RSSGQLFNCALAVQDGQLLGVIPKSYLPNYREFYEKRWFSDASSVIEDTISVGGHIAPFG 158 Query: 135 NDPIVFRDIRLGIL-----ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE 189 D ++F + L L ICED W H GA + +L+AS K ++R Sbjct: 159 TD-LLFEALDLPGLVVHAEICEDFWSPIPPSLHGALAGATVMVNLSASNATIGKARERAA 217 Query: 190 IVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY 247 + Q ++ G+ +L +DG + + LA + ++ + Sbjct: 218 LCDAQSRRTQGAYVFSAAGTGESTTDLAWDGQLLAYQQGELLAEGERFLNDTPAVLYADI 277 Query: 248 D--------QQLSQWNY--------------------MSDDSASTM--------YIPLQE 271 D +LS W M D+A + ++P Sbjct: 278 DLERITGERARLSTWRDACARHADALKAYTRIGFTLDMDRDAAIALERSIDRFPFVPNDA 337 Query: 272 EEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KEN 320 D YN V L ++ + +IG+SGG+DS + A A D LG + Sbjct: 338 TRLDEDCYEAYNIQVQGLVQRLKATGLKRAVIGVSGGLDSTQALIVTARAFDRLGLDRSG 397 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIV 378 + + LP TS + +A A + LG + + I + ++ + + + Sbjct: 398 IFAVTLPGFATSEGTRRNALALIEGLGATHREIDIRPAAERMLADLNHPYSDGADQYDVT 457 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQV 437 EN+Q+ +R + L ++NH +++ T + SE+++G+ T GD +N + KT + Sbjct: 458 FENVQAGLRTDYLFRMANHEGGLVIGTGDLSELALGWCTYGVGDHMSHYNVNAGVAKTLI 517 Query: 438 FQLASW---RNSHG--ITSGLGPL--TEVIPPSILEKSPSAELRPHQTDQESLPPYPILD 490 L W R +G ++ L + TE+ P E P+ Q+ + ++ PYP+ D Sbjct: 518 QHLIGWAARREEYGADVSRALMDVLNTEISP----ELVPAGADGAIQSTEAAIGPYPLND 573 Query: 491 DIIKRIVEN 499 + +V + Sbjct: 574 FFLHYVVRH 582 >gi|329765326|ref|ZP_08256906.1| NAD+ synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138232|gb|EGG42488.1| NAD+ synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 264 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 120/232 (51%), Gaps = 27/232 (11%) Query: 275 DYNACVLSLRDY----VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 DY + + ++ ++K+ + VI+GLSGGIDSA+ A I L KE I++P Sbjct: 13 DYTEIICKIEEFLVQQIEKSKSNGVILGLSGGIDSAVLAYICKRIL-KEKTLAIIMPDTQ 71 Query: 331 TSPQS-LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 +P+S EDA G +Y ++ I +VN + S +L EP+ N+++R+R N Sbjct: 72 ITPRSETEDAMKMIALTGLEYKLIDIKPIVNEY----SNYL--EPNERAKGNLRARVRTN 125 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 IL +N ++L +S+KSE +GY T +GD + P+ LYK QV ++A Sbjct: 126 ILYYYANVKNYLVLGSSDKSEYLIGYFTKFGDGASDIVPIISLYKLQVREIARV------ 179 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL-RPHQTDQESLPPYPILDDIIKRIVENE 500 LG IP +I+EK S L + H+ ++E Y +D I+ I E + Sbjct: 180 ---LG-----IPQNIIEKKSSPHLWKEHEAEKEIGVSYEEIDSILYCIFEKK 223 >gi|297527115|ref|YP_003669139.1| NAD+ synthetase [Staphylothermus hellenicus DSM 12710] gi|297256031|gb|ADI32240.1| NAD+ synthetase [Staphylothermus hellenicus DSM 12710] Length = 275 Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 22/204 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ-SLEDAAA 341 +++ +++ N +IGLSGG+DS++ +A+ A+G E V + +P +P+ +EDA Sbjct: 24 IKNKIEEANLKGAVIGLSGGVDSSVTLLLALKAVGPEKVTAMFMPDTRATPKRDMEDALW 83 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSK 399 K G KY V+ I D+V+ + S+M F P+G N+++RIR NIL +N Sbjct: 84 LVKKYGIKYYVIRIDDIVDSY-SVMPFFNINYNIPTG----NLRARIRMNILYYYANLHN 138 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++ T ++SEI +GY T +GD P+ LYKTQV ++ + LG Sbjct: 139 YLVVGTGDRSEILIGYFTKFGDGGVDILPIGSLYKTQVRKMGEY---------LG----- 184 Query: 460 IPPSILEKSPSAELRPHQTDQESL 483 +P I K S L P +E L Sbjct: 185 LPERITSKPSSPALWPGHKAEEEL 208 >gi|16081948|ref|NP_394358.1| NAD synthetase [Thermoplasma acidophilum DSM 1728] gi|25090797|sp|Q9HJR8|NADE_THEAC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|10640176|emb|CAC12028.1| NAD(+) synthase related protein [Thermoplasma acidophilum] Length = 241 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 25/229 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR +Q N +IG+SGGIDS++ A+ ++ KE + + +P + T +D Sbjct: 15 LRKVLQGKN---AVIGISGGIDSSVTLALLTRSIPKERIIPVFMPDRNTQQADYDDVQKL 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + LG Y + I +V+ F S ++ NI+SR R IL +N + M+ Sbjct: 72 TQKLGLTYREVRIDPMVDSFVSTLAA-----TDRAAIGNIKSRTRMIILYYFANTNGGMV 126 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + T+N++E+ +GY T YGD P++ LYK V++LA + IP Sbjct: 127 VGTTNRTELLLGYFTKYGDGGCDVEPIEHLYKRDVYELAKILD--------------IPE 172 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 SI++K P+A L QTD++ + Y +D+I+ + ++ N+ EY Sbjct: 173 SIMKKKPTAGLWAGQTDEDEIGMSYAQMDEILSDVF--DKGTYNDKPEY 219 >gi|257460482|ref|ZP_05625583.1| NAD+ synthetase [Campylobacter gracilis RM3268] gi|257441813|gb|EEV16955.1| NAD+ synthetase [Campylobacter gracilis RM3268] Length = 267 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 128/256 (50%), Gaps = 37/256 (14%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 ++G+SGG+DSA+ +A+ AL + ++LP ++ +++ D ++ Y++ I Sbjct: 27 VVGISGGLDSAVVSALC--ALTEIPTYGLILPSAGSNLENMADGIFHCESFNIPYEIQEI 84 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 V +F +L S + N +R+R ++L S + +++ TSN SE +GY Sbjct: 85 APFVENFTAL-----NPGASALRIGNFAARVRMSLLYDYSVAKRGVVVGTSNLSERMLGY 139 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 GT+YGD++ FNP+ ++ KT +F+ A I +I++K+PSA+L Sbjct: 140 GTIYGDLACAFNPIGEILKTDLFKFAK--------------ILCIDDAIIKKAPSADLWE 185 Query: 476 HQTDQESLP-PYPILDDIIKRIVENE---------ESFINNDQEY------NDETVRYVE 519 +Q+D+ L Y ILD +++ I +E E ND +Y N E V++V Sbjct: 186 NQSDERELGYSYEILDSVLRDIFSHEALRMKFRSGERINANDLKYLQNSRHNQELVKFVV 245 Query: 520 HLLYGSEYKRRQAPVG 535 + + +K R+ V Sbjct: 246 RRILKNNFKLREPAVA 261 >gi|269926107|ref|YP_003322730.1| NAD+ synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269789767|gb|ACZ41908.1| NAD+ synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 246 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 33/262 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++ V + + + LSGGIDSA A +AV A+G + V T++LP +++PQ E A Sbjct: 14 IKSKVDEAGAKGIALNLSGGIDSATVAGLAVKAVGPDKVHTLILPI-HSNPQDEEHARLV 72 Query: 343 AKALGC---KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A+ G K D+ P+ F L+ Q L E S + N++ R+R + ++N + Sbjct: 73 AEKFGLTPQKIDLSPV-------FDLLIQTLPEG-SDLAKANLKPRLRMITIYYIANTNN 124 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++ T NK+EI VGY T YGD P+ LYK V +LA LG Sbjct: 125 LLVVGTGNKTEIMVGYYTKYGDGGVDILPIGGLYKKDVRELAKV---------LG----- 170 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYV 518 +P I+ K PSA L P QTD+ + Y LD ++ + + E I D V Sbjct: 171 VPEEIIAKPPSAGLWPGQTDEGEMGITYEQLDRALEALEKGERDGIPED------VFSMV 224 Query: 519 EHLLYGSEYKRRQAPVGTKITA 540 + ++ S +KR + + +T+ Sbjct: 225 QSMVRRSSHKRELPAIYSPVTS 246 >gi|332799123|ref|YP_004460622.1| NH(3)-dependent NAD(+) synthetase [Tepidanaerobacter sp. Re1] gi|332696858|gb|AEE91315.1| NH(3)-dependent NAD(+) synthetase [Tepidanaerobacter sp. Re1] Length = 241 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 32/259 (12%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 ++ V L+DY QK + G+SGGIDSA+ + + A G EN +++P Y+ Sbjct: 8 DSLVTWLKDYTQKAGALGAVFGMSGGIDSAVVSVLCKRAFG-ENALGLIMPC-YSDKDDE 65 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DA A KY + + D+ + F +M + + + NI+ R+R L + Sbjct: 66 RDAKLVADKFDIKYQTIILDDVYDEFLKVMVK----SENQMAKANIKPRLRMIALYYYAA 121 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++ + NKSEI+VGY T YGD P+ +L K QV +LA++ + Sbjct: 122 LNHYLVVGSENKSEITVGYFTKYGDGGADLWPIGNLVKGQVKKLAAYLD----------- 170 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE-ESFINNDQEYNDETV 515 IP I++K P+A L Q+D++ + I NE + +I + N E Sbjct: 171 ---IPQKIIDKVPTAGLWSGQSDEKEMG-----------ITYNELDRYILTGEIANPEIR 216 Query: 516 RYVEHLLYGSEYKRRQAPV 534 + L SE+KRR A + Sbjct: 217 DRIRALYIKSEHKRRLAKI 235 >gi|119872801|ref|YP_930808.1| NAD synthetase [Pyrobaculum islandicum DSM 4184] gi|119674209|gb|ABL88465.1| NH(3)-dependent NAD(+) synthetase [Pyrobaculum islandicum DSM 4184] Length = 269 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 25/255 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++YV + V+IGLSGG+DS + AA+AV+ALG V + +P YT + +DA Sbjct: 25 IKEYVAGAGVNGVVIGLSGGVDSTVTAALAVEALGSGRVLGLFMPSIYTPKEDEKDAIEV 84 Query: 343 AKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A LG K D++PI V + + + ++ + NI R+R +IL +N Sbjct: 85 ANRLGIRLIKVDIMPI---VEAYAKSIPDYSPDD--RVSVGNIMPRVRMSILYYYANRYN 139 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++ + ++SE+ +GY T YGD F P+ LYK QV ++A R G S Sbjct: 140 MLVVGSGDRSELLLGYFTKYGDGGVDFLPIGSLYKVQVREMAR-RLGFGWIS-------- 190 Query: 460 IPPSILEKSPSAEL-RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYV 518 EK S L H + E PY +LD ++ I + + ++ +E E V V Sbjct: 191 ------EKPSSPRLWHGHTAEGELGAPYEVLDTVLYAIFDKKMP-LDKAREMFGEVVDLV 243 Query: 519 EHLLYGSEYKRRQAP 533 + + + +K + P Sbjct: 244 INRVKTNAHKLKPPP 258 >gi|219851826|ref|YP_002466258.1| NAD+ synthetase [Methanosphaerula palustris E1-9c] gi|219546085|gb|ACL16535.1| NAD+ synthetase [Methanosphaerula palustris E1-9c] Length = 238 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 19/215 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R + + +++GLSGGIDSA+ AA+ A+G E V + LP T P +EDAA Sbjct: 2 IRHTIWSSGSEGLVVGLSGGIDSAVAAALCCRAVGPEQVLGVSLPTSVTPPSDMEDAADL 61 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A ALG ++ + PI ++ + L + +E P + N+ +R R +L +N ++ Sbjct: 62 AAALGIQHLIQPIDPILAAYTGL--EGYRETP--YLNGNLMARTRMTVLYYYANRDHRLV 117 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 TSN++E +GY T +GD + P+ LYK V+ LA+ IPP Sbjct: 118 CGTSNRTEYLLGYCTKFGDNAADLQPILHLYKEDVYTLAA--------------DFPIPP 163 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 +I+ K PSA L Q+D++ L YP +D ++ + Sbjct: 164 AIISKPPSAGLWHGQSDEQELGLTYPEIDAALRSL 198 >gi|315925767|ref|ZP_07921974.1| NAD synthetase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620876|gb|EFV00850.1| NAD synthetase [Pseudoramibacter alactolyticus ATCC 23263] Length = 648 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 131/619 (21%), Positives = 243/619 (39%), Gaps = 94/619 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + + +AI ++ V D A N A EEA G+ ++LF EL ++GY DL + + Sbjct: 13 MVRTALAIPEIR--VADPAANTAAMMALGEEAAAAGVGILLFPELAVTGYTCGDLFAQSA 70 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + L + +VVG P + N V ++ G I+ K +PN Sbjct: 71 LLAGAEAGLAALAEWSQAAKMLVVVGAPIPVGSALYNCGVAINRGRILGSVPKTYIPNTH 130 Query: 122 EFHEKRTFISGYS---------------NDPIVFRD-----IRLGILICEDIWKNSNICK 161 EF+EKR F + ++F D + +G+ ICED+W + Sbjct: 131 EFYEKRWFAASRQLQEDRVTHAGQTFPIGADLLFSDWDDANVTVGLEICEDLWAPAPPSG 190 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 L GA + + +AS K + R +V Q + + +Y + G+ +L+F G Sbjct: 191 ELAAAGATLVLNPSASNELTGKSEYRKNLVVQQSARCNAAYLYASCGIGESTTDLVFGGE 250 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYD------------------------------Q 249 + LA Q + F + + D Q Sbjct: 251 GLIVEKGTVLA-QTERFMREGRLIAADVDVEALVHDRRMQSSFADAGPAEPHRRVAFCCQ 309 Query: 250 QLSQWNYMSDDSASTMYIPLQEEEADYNAC--VLSLRDYVQKNNFHKV-----IIGLSGG 302 + W + + ++P + C + +++ + H + ++G+SGG Sbjct: 310 EAKDWRRPVNPAP---FVPADSAKRTAR-CEEIFAIQSVGLMSRLHHIGDVPMVLGISGG 365 Query: 303 IDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI-H 356 +DS L + DA L + + +P T+ ++ ++A A + LG + + I Sbjct: 366 LDSTLALLVCADACDRLGLPHSAIHAVTMPGFGTTDRTYDNAVALIRGLGATFHEIGISR 425 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 +H + + + EN Q+R R ILM L+N +++ T + SE+++G+ Sbjct: 426 AAADHLADIGHDLAVHD---VTYENAQARERTQILMDLANQVGGIVVGTGDLSELALGWA 482 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP-LTEV----IPPSILEKSPSA 471 T GD + + KT V L ++ +G+ LT+V + P +L S Sbjct: 483 TYNGDHMSMYAVNAGVPKTLVRYLVAYVADQARFAGIWQILTDVLDTPVSPELLPPDESG 542 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ--------EYNDETVRYVEHLLY 523 ++ Q ++ + PY + D + +V N S D+ Y+ +R Y Sbjct: 543 KI--AQKTEDLVGPYALHDFFLYHVVRNGFSPKKVDRLARAAFAGTYDAVVIRKWLRRFY 600 Query: 524 ----GSEYKRRQAPVGTKI 538 ++KR P G K+ Sbjct: 601 RRFFAQQFKRSCLPDGPKV 619 >gi|85859763|ref|YP_461965.1| NAD synthetase [Syntrophus aciditrophicus SB] gi|85722854|gb|ABC77797.1| glutamine-dependent NAD(+) synthetase [Syntrophus aciditrophicus SB] Length = 691 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 128/549 (23%), Positives = 219/549 (39%), Gaps = 76/549 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ AI + V D N K +EA LF EL +S Y EDL + + + Sbjct: 20 IRTAICIPDVRVADTEFNAEKTISMAKEAAAGKAVFALFPELNLSAYSNEDLFHQDALQE 79 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + +T ++VG P + + N VIL G I+ + K LPNY EF+ Sbjct: 80 NVYDALFKVARETASLNLILIVGAPIRVDCRLYNCGVILYQGRILGIAVKSYLPNYREFY 139 Query: 125 EKRTFIS-----------GYSND-----PIVF-----RDIRLGILICEDIWKNSNICKHL 163 E R F G ND ++F ++ + I ICED+W Sbjct: 140 EARQFSPADQAIATSIDLGTQNDIPFGANLIFEVKNIKNFKFFIEICEDVWVPIPPSSFA 199 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS K + RH + Q + +Y G+ +L +DG + Sbjct: 200 AMAGATVIANLSASNITVGKSEYRHSLTANQSARCVSAYLYAAAGPGESTTDLAWDGHAM 259 Query: 222 CFDGQQQLAFQMKHFS-----------------EQNFMTEWHYDQQ-----LSQWNYMSD 259 ++ L+ + + FS ++ +T + + + L ++ ++ Sbjct: 260 IYENGNLLS-ESQRFSRVPQIIFADVDLDRLAQDRMRLTTFGLNARTHKDILCRFRRIAF 318 Query: 260 DSASTM-------------YIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLS 300 D A YIP + D YN V L ++ V+IG+S Sbjct: 319 DIAPVSGKIFLIRQYPRFPYIPADPSKRDQRCYESYNIQVQGLSKRLESTGIKNVVIGIS 378 Query: 301 GGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS + AA +D LG + ++ +P T+ ++ ++ KAL + + + I Sbjct: 379 GGLDSTHALIVAAKTMDLLGYPRSCIKAYTMPGFATTDKTYTNSLRLMKALEVEANEIDI 438 Query: 356 HDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 + E I ENIQ+ R + L ++N A++L T + SE+++ Sbjct: 439 RPSCIQMLKDIGHPFAEGKKLYDITFENIQAGERTSHLFRIANMRNALVLGTGDLSELAL 498 Query: 414 GYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 G+ T GD ++ + KT + L W ++ P T ILE S E Sbjct: 499 GWCTYGVGDHMSHYSVNASVPKTLIQHLIRWVAQ---SNQFSPETSETLIDILETEISPE 555 Query: 473 LRPHQTDQE 481 L P + +Q+ Sbjct: 556 LVPGEENQQ 564 >gi|300113681|ref|YP_003760256.1| NAD+ synthetase [Nitrosococcus watsonii C-113] gi|299539618|gb|ADJ27935.1| NAD+ synthetase [Nitrosococcus watsonii C-113] Length = 697 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 131/569 (23%), Positives = 223/569 (39%), Gaps = 90/569 (15%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + +A+ +L V D + N K R +A Q L+ F EL +S Y +DL +++ + Sbjct: 22 RATVAVPELR--VADPSFNAQKTRDLLGQAADQHSLLVAFPELGLSAYSCDDLFQQQALL 79 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 C + + + + +VG P Q + + N V+ G ++ V K +PNY EF Sbjct: 80 AECQQGLRQILNYSKQLPLIGIVGLPLQVEHLLFNCAVVFYRGRLLGVVPKTYVPNYREF 139 Query: 124 HEKRTFISG-YSNDPIV----FRDIRLG----------------ILICEDIWKNSNICKH 162 +E R F Y+ + +++ G + ICED+ + Sbjct: 140 YELRQFAPADYALRECIDLCDQKEVPFGSYLLFQVAEQPLLTFHVEICEDLRSPIPPSSY 199 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA + +L+AS K R + Q S +Y G+ +L +DG Sbjct: 200 AALAGATVIINLSASNITVGKDDYRRLLANSQSSRCLAAYLYTAAGTGESTTDLAWDGHG 259 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAS----------------- 263 ++ LA + + FS + + D Q + M +S Sbjct: 260 MVYENGDCLA-ETERFSYTSQLASADIDLDRLQQDRMRQNSFGQSRARHRDRLTAFRTIR 318 Query: 264 -TMYIPLQEE------------------------EADYNACVLSLRDYVQKNNFHKVIIG 298 + +P QE + Y+ + L +Q + KV+IG Sbjct: 319 FSAPLPAQESVLLKRIYERFPYVPSDPINRDRRCQEVYDIQIQGLVKRLQAAHTDKVVIG 378 Query: 299 LSGGIDSA---LCAAIAVDA--LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS + A A+D+ L + +V +P TS ++L A A+GC+ + Sbjct: 379 ISGGLDSTQALIICARAMDSMKLPRRHVLAYTMPGFATSERTLNQARQLMAAVGCQAHEI 438 Query: 354 PIH-DLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I + L + Q EP + EN+Q+ R + L L+N A+++ T + SE+ Sbjct: 439 DIRPSCLQMLKDLGHPYAQGEPVYDVTFENVQAGERTSHLFRLANFHSALVVGTGDLSEL 498 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW--RNSHGITSGLGPLTEVIPPSILEKS 468 ++G+ T GD ++ + KT + L W RN L P I I Sbjct: 499 ALGWCTYGVGDHMSHYHVNASVPKTLIQYLIGWVARN-----QSLSPEASAILEEIRATD 553 Query: 469 PSAELRPH-------QTDQESLPPYPILD 490 S EL PH Q +E + PY + D Sbjct: 554 ISPELVPHKSKEQPGQRSEEVIGPYELQD 582 >gi|119872946|ref|YP_930953.1| NAD+ synthetase [Pyrobaculum islandicum DSM 4184] gi|119674354|gb|ABL88610.1| NH(3)-dependent NAD(+) synthetase [Pyrobaculum islandicum DSM 4184] Length = 263 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 97/159 (61%), Gaps = 3/159 (1%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 + DYV + V++GLSGG+DS+ A+AV+ALG + V ++LP +YT Q +EDA + Sbjct: 14 IHDYVSSSGAKGVVVGLSGGVDSSTALALAVEALGADRVVALVLPSRYTPQQDVEDAVSL 73 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK LG ++ V+ I +V+ + SL +E + N+ +R+R +IL +N ++ Sbjct: 74 AKQLGVRHFVVQIDQIVSAYSSLP---FYDEGDQVARGNLMARVRMSILYYYANRYDMLV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 L T +KSE+ +GY T YGD P+ DLYKTQV ++A Sbjct: 131 LGTGDKSELMLGYFTKYGDGGVDLLPIGDLYKTQVRRMA 169 >gi|309775982|ref|ZP_07670974.1| glutamine-dependent NAD+ synthetase [Erysipelotrichaceae bacterium 3_1_53] gi|308916264|gb|EFP62012.1| glutamine-dependent NAD+ synthetase [Erysipelotrichaceae bacterium 3_1_53] Length = 643 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 113/490 (23%), Positives = 197/490 (40%), Gaps = 98/490 (20%) Query: 10 AQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 A + PVV D+ N KA + +A + + L +F EL + GY +DL+++ + C Sbjct: 10 ACITPVVSIADVDAN-RKAIQRLLQALDKDVRLAVFPELSLCGYTCQDLLYQSVLLDECL 68 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 +A+ TL+ D ++ A + +G P + + N L ++ + K +PNY+EF+EKR Sbjct: 69 AALKTLR-DENESEAIVAIGLPVRQGNHLFNCAAFLYKHKLLGIVPKTYVPNYNEFYEKR 127 Query: 128 TFISGYS---------------NDPIVFRDIRLGILI----CEDIW-----KNSNICKHL 163 F S + ++ D+ +I CED+W ++C Sbjct: 128 WFSSSTQRLGDTISLFGETIPFTENLLIHDVTSEAIIAGELCEDLWVPVPPSTRHVC--- 184 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 GA + +L+AS K R ++T + +Y + G E D F Sbjct: 185 --HGANVIVNLSASNEIIGKSDYRKTLITTHSAKTMCGYVYTS--AGVSESTSD---LVF 237 Query: 224 DGQQQLAFQMKHFSEQNFMTEWH-----YDQQLSQWNYMSDDSASTMYIPLQEEEADYNA 278 G +A SE + E H D + + M +A + LQ+ + Sbjct: 238 SGHDIIADNGTIISESEILKEEHILYGEIDLEKCRSERMKFQTA----LELQDSQPYTEV 293 Query: 279 CVLS----------------------------------------LRDYVQKNNFHKVIIG 298 C+ + L ++K + ++IG Sbjct: 294 CIQTAPITSPLQLARSISPYPFVPSDPTLRSSRCMQILNMQAAGLSQRLKKIHCEHLLIG 353 Query: 299 LSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS L +A A L +N+ + +P T+ ++ ++ +AL + Sbjct: 354 ISGGLDSTLALIVASMAFERIKLPSKNIIAVTMPGFGTTKRTQGNSHKLMEALHTTSREI 413 Query: 354 PIHDLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 IHD F + LQ+ I EN Q+R R ILM L+N ++L T + SE+ Sbjct: 414 LIHDACQQHFQDIGHDASLQD----ITYENTQARERTQILMDLANAYNGIVLGTGDLSEL 469 Query: 412 SVGYGTLYGD 421 ++G+ T GD Sbjct: 470 ALGWCTYNGD 479 >gi|297588575|ref|ZP_06947218.1| NAD(+) synthase [Finegoldia magna ATCC 53516] gi|297573948|gb|EFH92669.1| NAD(+) synthase [Finegoldia magna ATCC 53516] Length = 241 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 118/241 (48%), Gaps = 31/241 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ N + G+SGGIDSA+ A + A G +N +++P K ++P+ EDA Sbjct: 14 IKEEVESANLKGAVFGISGGIDSAVLACLCKKAFG-DNALGLIMPIK-SNPKDEEDARIL 71 Query: 343 AKA--LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+A L CK L N F + Q ++ + A NI+ R+R L + ++ Sbjct: 72 AEAIDLNCKKVDL------NGGFDALIQTFEKTSVEMAASNIKPRLRMITLYYYAQNNGY 125 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 M+L+ SN+SE GY T YGD PL +LYKT +F++A + Sbjct: 126 MVLSGSNRSEFMTGYFTKYGDSGADLMPLLNLYKTDIFEMAK--------------VLRV 171 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 P I+ K PSA L QTD++ Y LD+ ++ N E+ ++ D+ +R E Sbjct: 172 PDIIINKKPSAGLWEGQTDEDEFGFTYEELDNY---LMNNSET---KSKDLIDKKIRQSE 225 Query: 520 H 520 H Sbjct: 226 H 226 >gi|168333531|ref|ZP_02691800.1| NAD+ synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 241 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 15/201 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RDYV+ V+IG+SGG DSA+ A+ V ALG + V + +P ++P +E A Sbjct: 12 IRDYVKMAGAAGVVIGISGGKDSAVTTALCVKALGADKVLGVSMPCS-SNPADVEHAKMV 70 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+A G + V+ + D +S + E I NI+ R+R L L+ ++ Sbjct: 71 AEAFGVELFVVELKDSYEQMKKSISSQVDFELRDIALANIKPRLRMITLYTLAQTKNYLV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + T N SE+ +GY T +GD + NPL DL +V + LG +P Sbjct: 131 VGTDNLSEMVMGYFTKWGDGAYDINPLSDLTVKEVLEFG---------KELG-----VPN 176 Query: 463 SILEKSPSAELRPHQTDQESL 483 IL K+PSA L QTD++ + Sbjct: 177 VILTKAPSAGLWEGQTDEKEM 197 >gi|297624396|ref|YP_003705830.1| NAD+ synthetase [Truepera radiovictrix DSM 17093] gi|297165576|gb|ADI15287.1| NAD+ synthetase [Truepera radiovictrix DSM 17093] Length = 296 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 25/273 (9%) Query: 283 LRDYV-QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 LRD V ++ F +V++ LSGGIDSA+ A +A A G ENV + LPY+ + P SL A Sbjct: 43 LRDEVTRRKGFDRVVVPLSGGIDSAVTAYLAARAFGPENVHALRLPYRASDPDSLAHAQL 102 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 ALG + L I ++V+ + L+ N+ +R+R + + A+ Sbjct: 103 VVDALGLPAETLDITEMVDAYARLVPDVTPHRLG-----NVMARVRMIVAFDKAAELGAV 157 Query: 402 LLTTSNKSEISVGYGTLYGDMSGG-FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 L T NK+E GY T + +PL DL+KTQV LA LG + Sbjct: 158 HLGTGNKTERFFGYYTWHDVADAAPVSPLGDLFKTQVRALAEH---------LG-----V 203 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDI-IKRIVENEESFINNDQEYNDETVRYV 518 P ++ K PSA+L Q+D+ L Y D I I + +++I + ++ + V Sbjct: 204 PEAVRRKPPSADLVVGQSDEADLGISYERADTILIHHLSGYGDAYIES-LGFSAAEIALV 262 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPI 551 L+ + +K R P+ +++ + G L P+ Sbjct: 263 RGLVAKTHWK-RALPIHAVVSSTAIGEFYLRPV 294 >gi|160946337|ref|ZP_02093546.1| hypothetical protein PEPMIC_00297 [Parvimonas micra ATCC 33270] gi|158447453|gb|EDP24448.1| hypothetical protein PEPMIC_00297 [Parvimonas micra ATCC 33270] Length = 235 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 26/239 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR V++ N ++ GLSGG+DSA+ AA++ A E++ IM+P S E+ Sbjct: 12 LRSSVKEANCKGIVYGLSGGVDSAVIAALSKLAFDDESL-AIMMPI-----NSCEEDEKD 65 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK + K+ + I ++ +S+ + +++ + + NI+ R+R L + + ++ Sbjct: 66 AKLVIDKFKLNAIKVDLSKTYSVFTDSVEKGDNSMAYANIKPRLRMTTLYYYAQLKRYLV 125 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + TSNKSE +VGY T YGD PL D K ++F+LA + +P Sbjct: 126 VGTSNKSEFTVGYFTKYGDSGSDLMPLVDFTKREIFELAKFLK--------------VPD 171 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEH 520 I++K PSA L +QTD++ + Y DD+ K I N E N +E + V+ EH Sbjct: 172 KIIQKPPSAGLFENQTDEDEMGFSY---DDLEKFI--NGEKLDKNIEEKIKKMVKISEH 225 >gi|325479862|gb|EGC82947.1| NAD+ synthase [Anaerococcus prevotii ACS-065-V-Col13] Length = 601 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 140/592 (23%), Positives = 241/592 (40%), Gaps = 66/592 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K +KI +GD+ N+ + +A G++++ EL ++G DL + Sbjct: 1 MKKNIKILSTNFEIALGDVRRNLETIKNIISKAESDGVNILSLPELSLTGASLYDLYKED 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S I+A AI LK+ + D I VG P + V N+ +++ G I+ + K NL +Y Sbjct: 61 SLIKAVEEAILELKNYSKDFDLLISVGAPLRSSGFVYNTSLLIKRGEILNIYVKTNLKDY 120 Query: 121 SEFHEKRTFISGYSND----------PIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 + + G+S P +++G+ I ED K+ GA+ Sbjct: 121 EKTVFRDMIPDGFSIGGENIEINPFYPENIGGLKIGVSIGEDEKNTIPQSLTFKELGADI 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCF-DG 225 + + NA K E I + ++Y++ G E ++ G + DG Sbjct: 181 ILNPNA----FEKTVLSTEKTIEDIKFLSKDVVYISTGTGSGESSTDFVYQGLNAIIDDG 236 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST---MYIPLQEEEADYNACVL- 281 + Q F E D +S N+ SD + Y+P +E+E + V Sbjct: 237 KIQGVSNNDSVVYTKFF-EIDIDSPISFTNF-SDKNIKLDKFPYLPRKEKEDLFVKDVFD 294 Query: 282 ----SLRDYVQKNNFHKVIIGLSGGIDSALCA-----AIAVDALGKENVQTIMLPYKYTS 332 L + K V IG+SGG+DS + A LG+EN+ +P TS Sbjct: 295 IASAGLLTRMGKIGVKDVFIGVSGGLDSTMALLFIDYAFKKAGLGRENIHAYTMPAFATS 354 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVN-HFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 ++ +A +AL K + + I + V H + ++++ + EN Q+R R +L Sbjct: 355 KRTKSNANLLCEALDIKLNEINISEAVKVHLKDIGHDGIKQD---VAYENAQARERTQVL 411 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 L+N +++ T + SEI G+ T GD ++ L KT + + + + Sbjct: 412 FDLANMHGGIVIGTGDLSEIMQGFATFNGDHMSNYSLNASLTKTHLRFIVGNVSKNTEND 471 Query: 452 GLGPLTEVI---PPSILEKSPSAELRPHQTDQESLPPYPILD--------------DIIK 494 L + E I P S K+ S E +T ++ + PY ++D DI K Sbjct: 472 KLKSVLEDILSTPISPELKNESEETISQKT-EDIIGPYELIDFFIYYHLAYKLSPEDIYK 530 Query: 495 RIVENEESFINNDQEYNDETVRYVEHLLY----GSEYKRRQAPVGTKITAKS 542 + V E +Y+ +T++ Y S++KR A G IT S Sbjct: 531 KAVFAFEG------DYSKDTIKKWLKSYYKRYASSQFKRATAVDGPSITGLS 576 >gi|15679507|ref|NP_276624.1| NH(3)-dependent NAD+ synthetase [Methanothermobacter thermautotrophicus str. Delta H] gi|2622628|gb|AAB85985.1| NH(3)-dependent NAD+ synthetase [Methanothermobacter thermautotrophicus str. Delta H] Length = 274 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 18/201 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R V ++ V++GLSGG+DS+ A +AV+ALG + V +++P T L A Sbjct: 27 IRQKVAESGASGVVLGLSGGVDSSTVAYLAVNALGPDRVLGLIMPSSTTPRDDLRHARTV 86 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A LG + + + I ++ L S E + N++ R R IL +N ++ Sbjct: 87 ADELGIESETIDIDPIIESLTGLCSHNANE----LALANLKPRARMVILYYHANSLNRLV 142 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 T N++E+ +GY T YGD P+ LYK QV +LA LG +PP Sbjct: 143 AGTGNRTELLLGYFTKYGDGGVDMLPIGGLYKGQVRELAGR---------LG-----VPP 188 Query: 463 SILEKSPSAELRPHQTDQESL 483 I++K P+A L QTD+E L Sbjct: 189 EIIKKPPTAGLWHGQTDEEEL 209 >gi|8039796|sp|O27554|NADE_METTH RecName: Full=Probable NH(3)-dependent NAD(+) synthetase Length = 266 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 18/201 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R V ++ V++GLSGG+DS+ A +AV+ALG + V +++P T L A Sbjct: 19 IRQKVAESGASGVVLGLSGGVDSSTVAYLAVNALGPDRVLGLIMPSSTTPRDDLRHARTV 78 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A LG + + + I ++ L S E + N++ R R IL +N ++ Sbjct: 79 ADELGIESETIDIDPIIESLTGLCSHNANE----LALANLKPRARMVILYYHANSLNRLV 134 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 T N++E+ +GY T YGD P+ LYK QV +LA LG +PP Sbjct: 135 AGTGNRTELLLGYFTKYGDGGVDMLPIGGLYKGQVRELAGR---------LG-----VPP 180 Query: 463 SILEKSPSAELRPHQTDQESL 483 I++K P+A L QTD+E L Sbjct: 181 EIIKKPPTAGLWHGQTDEEEL 201 >gi|156938178|ref|YP_001435974.1| NH(3)-dependent NAD(+) synthetase [Ignicoccus hospitalis KIN4/I] gi|156567162|gb|ABU82567.1| NH(3)-dependent NAD(+) synthetase [Ignicoccus hospitalis KIN4/I] Length = 275 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 23/237 (9%) Query: 265 MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 M +P + ++ V L+D+ Q+ +IGLSGG+DSA+ AA+ +ALG E V+ + Sbjct: 3 MKLPEPDWDSVRKRIVGWLKDFFQRTG-RVAVIGLSGGVDSAVTAALLSEALGPERVRAL 61 Query: 325 MLPYKYTSPQSLEDAAACAKALGCK-YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 +LP T + +EDA A+ LG + V+ + + F L+ +V N Sbjct: 62 ILPSASTPEKDVEDAKRVARLLGIEDVRVIDVEPALRAFDDLLKV-----DDRVVRGNTL 116 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +RIR IL A++ H +++ T +KSE +GY T GD P+ DLYKT V +LA Sbjct: 117 ARIRMTILYAVA-HKDGIVVGTGDKSEFLLGYFTKCGDGCADVFPIGDLYKTWVRKLA-- 173 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN 499 L +P + K S L P +E L Y + D ++ +VEN Sbjct: 174 ------------LHMGLPEDVALKPSSPRLWPGHLAEEELGFSYEVADVVLYNLVEN 218 >gi|170288087|ref|YP_001738325.1| NAD+ synthetase [Thermotoga sp. RQ2] gi|170175590|gb|ACB08642.1| NAD+ synthetase [Thermotoga sp. RQ2] Length = 281 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 54/287 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ +++ N+ ++G+SGGIDSA+ ++ V ALGK+ V ++LP + +S S++DA Sbjct: 9 IKEKIEEYNYRGAVVGVSGGIDSAVVLSLCVQALGKDRVFGLILPERDSSKDSVKDAVEL 68 Query: 343 AKALGCKYDVLPIHDLVNH-----------FF--SLMSQF-------LQEEP-------- 374 ++L +Y + PI ++ FF S++ ++ L ++P Sbjct: 69 CESLKVEYKIKPITPILRKIGVYRLFPPKLFFPESVVKRYVLNKWNSLSKDPFLDDLRNS 128 Query: 375 ------SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 G+ I+ RIR +L + ++ T+N++E G +GD + P Sbjct: 129 GPNEFLKGLAYYRIKHRIRMCLLYFEAEKRGYAVVGTTNRTEYLTGLYVKWGDEAVDIEP 188 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYP 487 + LYKTQVF+LA N IP I +K PS +L P TD+ + Y Sbjct: 189 IMHLYKTQVFELARELN--------------IPEKIQKKPPSPDLIPGVTDEMAFGMSYM 234 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 LD I+ +I + ES + D E V V+ +L +E RR P+ Sbjct: 235 ELDRILMKI-DRGESLEDEDP----EKVERVKKILELAEKHRRGIPI 276 >gi|281411874|ref|YP_003345953.1| NAD+ synthetase [Thermotoga naphthophila RKU-10] gi|281372977|gb|ADA66539.1| NAD+ synthetase [Thermotoga naphthophila RKU-10] Length = 290 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 135/287 (47%), Gaps = 54/287 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ +++ N+ ++G+SGGIDSA+ ++ V ALGK+ V ++LP + +S S++DA Sbjct: 18 IREKIEEYNYKGAVVGVSGGIDSAVVLSLCVQALGKDRVFGLILPERDSSKDSVKDAVEL 77 Query: 343 AKALGCKYDVLPIHDLVNH-----------FF--SLMSQF-------LQEEP-------- 374 ++L +Y + I ++ FF S++ ++ L ++P Sbjct: 78 CESLNVEYKIKSITPILRKIGVYRLFPPKLFFPESVVKRYVLNKWNSLSKDPFLDDLRNS 137 Query: 375 ------SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 G+ I+ RIR +L + ++ T+N++E G +GD + P Sbjct: 138 GPDEFLKGLAYYRIKHRIRMCLLYFEAEKRGYAVVGTTNRTEYLTGLYVKWGDEAVDIEP 197 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYP 487 + LYKTQVF+LA N IP I +K PS +L P TD+ + Y Sbjct: 198 IMHLYKTQVFELARELN--------------IPEKIQKKPPSPDLIPGVTDEMAFGMSYI 243 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 LD I+ +I E +E + D E V V+ +L +E RR PV Sbjct: 244 ELDRILMKI-ERKEDLSDEDP----EKVERVKKILELAEKHRRGIPV 285 >gi|148269429|ref|YP_001243889.1| NAD+ synthetase [Thermotoga petrophila RKU-1] gi|147734973|gb|ABQ46313.1| NH(3)-dependent NAD(+) synthetase [Thermotoga petrophila RKU-1] Length = 281 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 80/287 (27%), Positives = 135/287 (47%), Gaps = 54/287 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ +++ N+ ++G+SGGIDSA+ ++ V ALGK+ V ++LP + +S S++DA Sbjct: 9 IREKIEEYNYKGAVVGVSGGIDSAVVLSLCVQALGKDRVFGLILPERDSSKDSVKDAVEL 68 Query: 343 AKALGCKYDVLPIHDLVNH-----------FF--SLMSQF-------LQEEP-------- 374 ++L +Y + I ++ FF S++ ++ L ++P Sbjct: 69 CESLNVEYKIKSITPILRKIGVYRLFPPKLFFPESVVKRYVLNKWNSLSKDPFLDDLRNS 128 Query: 375 ------SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 G+ I+ RIR +L + ++ T+N++E G +GD + P Sbjct: 129 GPDEFLKGLAYYRIKHRIRMCLLYFEAEKRGYAVVGTTNRTEYLTGLYVKWGDEAVDIEP 188 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYP 487 + LYKTQVF+LA N IP I +K PS +L P TD+ + Y Sbjct: 189 IMHLYKTQVFELARELN--------------IPEKIQKKPPSPDLIPGVTDEMAFGMSYI 234 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 LD I+ +I E +E + D E V V+ +L +E RR PV Sbjct: 235 ELDRILMKI-ERKEDLSDEDP----EKVERVKKILELAEKHRRGIPV 276 >gi|330859230|emb|CBX69580.1| hypothetical protein YEW_DZ17150 [Yersinia enterocolitica W22703] Length = 137 Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 2/118 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F Q C + +D L++ T ++VG P +++ + N++ + G ++ V N P Sbjct: 61 DFYQRCEAQLDRLQAATQQ--TAVLVGHPWREEGNLYNALSLFADGKLLGVISNSNYP 116 >gi|268323317|emb|CBH36905.1| probable NH(3)-dependent NAD(+) synthetase [uncultured archaeon] Length = 245 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 127/256 (49%), Gaps = 29/256 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R V++ + VI+G+SGG+DS++ A + +A K + IM P ++ P+ +E Sbjct: 14 IRKKVEEASAEGVILGMSGGLDSSVTAVLCKNAFPKSTLGLIM-PC-FSDPEDIEHVKQV 71 Query: 343 AKALGCKYDVLPIH-DLVNHFFSLMSQFLQEE-PSGIVAENIQSRIRGNILMALSNHSKA 400 A+ K+D+ DL F +++ + I N++ R+R +L +N Sbjct: 72 AE----KFDIETRKVDLSPVFLTVLETLGSKTYDRDIATANLKPRLRMLVLYYFANKLNY 127 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +++ T NKSE+ +GY T YGD PL DL KT+V LA + I Sbjct: 128 LVVGTGNKSELMIGYFTKYGDGGVDLLPLGDLLKTEVRALAEVLD--------------I 173 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 P +I+E PSA L QTD+ + Y +LD ++K + N+ + + D+ V+ V+ Sbjct: 174 PKAIIEMPPSAGLWVGQTDETEIGMSYEVLDGVLKALASNDFAGCDMDK------VKMVK 227 Query: 520 HLLYGSEYKRRQAPVG 535 ++ + +KR + PV Sbjct: 228 DMVKKAGHKREKTPVA 243 >gi|161528474|ref|YP_001582300.1| NAD+ synthetase [Nitrosopumilus maritimus SCM1] gi|160339775|gb|ABX12862.1| NAD+ synthetase [Nitrosopumilus maritimus SCM1] Length = 237 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 23/249 (9%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 ++KN+ +I+GLSGGIDSA+ A I + IM T +DA Sbjct: 1 MEKNHAEGLILGLSGGIDSAVLAYICKRKFANKTTALIMPDTAITPKTETDDALKMISLT 60 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G +Y +L I+ +VN + S +L EP+ N+++R+R NIL +N ++L +S Sbjct: 61 GIQYKLLDINPIVNEY----SMYL--EPNERAKGNLRARVRTNILYYYANAKNYLVLGSS 114 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 +KSE +GY T +GD + P+ LYK QV ++A + LG +P +++ Sbjct: 115 DKSEYLIGYFTKFGDGASDITPIVSLYKLQVREIAKY---------LG-----VPENVIL 160 Query: 467 KSPSAEL-RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE--TVRYVEHLLY 523 K S L + H+ + E Y +D I+ + E + S + + E T+ ++ L Sbjct: 161 KKSSPHLWKDHEAENELGISYEEVDSILYCLFEKKLSTEDTQKTTGIEMSTIEKIQELNK 220 Query: 524 GSEYKRRQA 532 SE+KR A Sbjct: 221 NSEHKRLPA 229 >gi|171184996|ref|YP_001793915.1| NAD+ synthetase [Thermoproteus neutrophilus V24Sta] gi|170934208|gb|ACB39469.1| NAD+ synthetase [Thermoproteus neutrophilus V24Sta] Length = 263 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 96/159 (60%), Gaps = 3/159 (1%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 + DYV + V++GLSGG+DS+ A+AV+ALG + V ++LP +YT Q +EDA + Sbjct: 14 IHDYVSASGAKGVVVGLSGGVDSSTALALAVEALGADRVVALVLPSRYTPQQDVEDAVSL 73 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG ++ V+ I + + + SL +E + N+ +R+R +IL +N ++ Sbjct: 74 ARQLGVRHFVVQIDQIASAYSSLP---FYDEGDQVARGNLMARVRMSILYYYANRYDMLV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 L T +KSE+ +GY T YGD P+ DLYKTQV ++A Sbjct: 131 LGTGDKSELMLGYFTKYGDGGVDLLPIGDLYKTQVRRMA 169 >gi|126466200|ref|YP_001041309.1| NH(3)-dependent NAD(+) synthetase [Staphylothermus marinus F1] gi|189030730|sp|A3DP41|NADE_STAMF RecName: Full=NH(3)-dependent NAD(+) synthetase gi|126015023|gb|ABN70401.1| NH(3)-dependent NAD(+) synthetase [Staphylothermus marinus F1] Length = 275 Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 93/163 (57%), Gaps = 6/163 (3%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ-SLEDAAA 341 +++ +++ N +IGLSGG+DS++ + + A+G E V +++P +P+ +EDA Sbjct: 24 IKNKIEEANLKGAVIGLSGGVDSSVTLLLTMKAIGIERVTALIMPDTRVTPKRDIEDALW 83 Query: 342 CAKALGCKYDVLPIHDLVNHFFSL-MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 K G KY V+ I D+V+ + ++ P+G N+++RIR NIL +N Sbjct: 84 LVKKYGIKYYVIRIDDIVDSYSAMPFFNINYNIPTG----NLRARIRMNILYYYANLHNY 139 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +++ T ++SEI +GY T YGD P+ L+KTQV ++ + Sbjct: 140 IVVGTGDRSEILIGYFTKYGDGGVDILPIGSLFKTQVRKMGDY 182 >gi|320527433|ref|ZP_08028614.1| NAD+ synthetase [Solobacterium moorei F0204] gi|320132146|gb|EFW24695.1| NAD+ synthetase [Solobacterium moorei F0204] Length = 653 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 113/487 (23%), Positives = 199/487 (40%), Gaps = 91/487 (18%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 V ++ N A+ + E G +++ EL ++GY DL + + + A + + + Sbjct: 17 VANVIYNTAQIIQTMNENADAG--FLVYPELCLTGYTCGDLFGQFTLLDAVEEGLFKIAN 74 Query: 76 DTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS 134 ++ G +VVG P + + + N V + G I+AV KINLP YSEF+E R F SG + Sbjct: 75 ASNKLEGLTVVVGAPLRFENHLYNCAVYISEGMIVAVVPKINLPTYSEFYESRWFTSGKN 134 Query: 135 NDPIVFRDIRL----------------------GILICEDIWKNSNICKHLKKQGAEFLF 172 IV + I+L G+ ICED+W H GA + Sbjct: 135 ---IVSQTIQLGDEFIPFGRNILACDSRSGAIVGLDICEDLWVPDKPSTHACLAGANIIA 191 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF--------- 221 +L+AS K R +V Q + + +YV+ + +L+F G S Sbjct: 192 NLSASDEMIGKQDYRRTMVLQQSASCYCAYLYVSSATDESSTDLVFSGHSMIACNGRLLT 251 Query: 222 ----------------------------CFDGQQQ------LAFQMKHFSEQNFMTEWHY 247 FD ++ + +K S Q+ +T Sbjct: 252 NSIFPEDTKVETVVIDLESIEKNRRHQTTFDLEENHDDYVYVDVSIKPISNQDEITVDEL 311 Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL------SLRDYVQKNNFHKVIIGLSG 301 L + Y+ + + ++P+ +EE + L V+ ++IG+SG Sbjct: 312 VDALRKEGYVVNRNP---FVPVDDEERGRRCMKILEIQANGLATRVRSTGIKNLVIGISG 368 Query: 302 GIDSALCAAIAVDALGKENVQTI-----MLP-YKYTSPQSLEDAAACAKALGCKYDVLPI 355 G+DS L A+ V ++ V I LP + T+ + +A +AL + + I Sbjct: 369 GLDSTL--ALLVCHQARKLVPDIHIIGYTLPSHGNTTSYTYNNALDLMRALDVEMHEVAI 426 Query: 356 HDLVNHFFSLMSQFLQEEPSG-IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + V + + G EN Q+R+R ILM ++N + +++ T + SE+++G Sbjct: 427 EEGVQAHLKQIGHPGSYQGDGDTTYENAQARMRTYILMDVANMANGLVVGTGDLSELALG 486 Query: 415 YGTLYGD 421 + T GD Sbjct: 487 WCTYNGD 493 >gi|257077140|ref|ZP_05571501.1| NAD synthetase [Ferroplasma acidarmanus fer1] Length = 239 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 116/226 (51%), Gaps = 21/226 (9%) Query: 276 YNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 Y + ++R+++++ K ++G+S GIDS+L + ++ ++ I +P KYT Sbjct: 5 YVDKIQAIREFLKEKIGEKHAVLGISSGIDSSLVLTLLATSIDNNKIKAIFMPDKYTKQD 64 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 ED +++ G + I ++ + +L+ + + NI+SRIR NIL Sbjct: 65 DYEDIKKLSESTGLDIITVNIESVLESYRALL-----DTSDKKLEGNIRSRIRANILYYH 119 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +N +++ T+N++E +GY T YGD + P++ ++KT V+++AS Sbjct: 120 ANLLGGVVIGTTNRTEYLLGYYTKYGDGACDIEPIEGIFKTDVWKIASILK--------- 170 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN 499 +P SI++K PSA L +Q D++ L Y +D I+ I +N Sbjct: 171 -----VPQSIIDKKPSAGLWENQYDEDELKMDYHEIDRILSDIFDN 211 >gi|237736148|ref|ZP_04566629.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium mortiferum ATCC 9817] gi|229421701|gb|EEO36748.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium mortiferum ATCC 9817] Length = 278 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 17/253 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ I Q+ P +G++ N+ ++A + D+++F EL ++GY ED+VF + + Sbjct: 3 MKVYIGQIKPTLGNVEKNLNMMLEVIDKAIAEKNDIVVFPELSLTGYSLEDIVFDVAIKE 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S ++ K GI+ G ++E N+ L+ G ++ K+ LP Y + Sbjct: 63 VPSVLLEKSKE------IGIIFGAVELGEEEYPYNTAYYLEDGKVVHKHRKVYLPTYGAY 116 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F++G + RLGILICED+W S L + GA+++F L SP Sbjct: 117 QEGRNFMAGDKVRAFDTKFGRLGILICEDVWHQST-QYILAQDGAKYVFILFNSPAVVG- 174 Query: 184 LKKRHEIVTGQISHVH----LPIIY---VNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 K++ E+ G + + L +Y VN+VG +D + F G SF ++ + ++ Sbjct: 175 -KRKEELSEGWKTIIKTNSLLNGVYSVAVNRVGVEDGIAFFGNSFVVAPNGEIVAEGEYL 233 Query: 237 SEQNFMTEWHYDQ 249 E +F E ++ Sbjct: 234 KEDSFTCELREEE 246 >gi|325294860|ref|YP_004281374.1| NAD(+) synthase (glutamine-hydrolyzing) [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065308|gb|ADY73315.1| NAD(+) synthase (glutamine-hydrolyzing) [Desulfurobacterium thermolithotrophum DSM 11699] Length = 279 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 16/253 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++++ Q P +G++ NI K + A ++G +L LF EL ++GY +DL F+ +F Sbjct: 1 MRVSVVQFKPTLGNVELNIEKTINFVKAALKEGANLCLFPELSLTGYYLQDLTFEVAFTI 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 + L+ GI+VG +D+ V NS L G I + K+ LP Y F Sbjct: 61 DDKRLLPLLELSRK---IGIIVGLIEEDENHVFYNSAFYLKDGEIKHIHRKVYLPTYGMF 117 Query: 124 HEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP--- 178 E R GY F + ILICED+W SN+ QG +F+F+ ++SP Sbjct: 118 DEGR--FVGYGKRVSSFETGFGKGSILICEDLWHFSNLYLAF-LQGTKFIFAQSSSPGRG 174 Query: 179 YYHNKLKKRHEIV--TGQISHVHLP--IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 Y + E+ G+ + Y N+VG +D +F G SF D + + Sbjct: 175 YREENMFGNAEVWKNMGEFYSRMMGSYFFYSNRVGVEDGFVFSGKSFVADPYGNIIAEAS 234 Query: 235 HFSEQNFMTEWHY 247 F E+ E +Y Sbjct: 235 SFEEEILTVEINY 247 >gi|52425943|ref|YP_089080.1| NadE protein [Mannheimia succiniciproducens MBEL55E] gi|81691323|sp|Q65RB5|NADE_MANSM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|52307995|gb|AAU38495.1| NadE protein [Mannheimia succiniciproducens MBEL55E] Length = 250 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 18/189 (9%) Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +G+SGGIDSA+CA +A A VQ ++LP + TSP + DA A ++ G ++ I Sbjct: 29 LGVSGGIDSAVCAHLA--ARTGAPVQALILPAEVTSPSDVADAQATLESAGIDGQIISIA 86 Query: 357 DLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + +S L EP ++ N+ +R+R L + ++++L T N +E G Sbjct: 87 PWYDLIMQQLSPVLNSEPERVNVLKGNLMARLRMIALFTTAQSHRSIVLGTDNAAEWLTG 146 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T +GD + PL L K QVF+L + LG +P S+L+K PSA L Sbjct: 147 YFTKFGDGAADVLPLAGLRKEQVFELGRY---------LG-----VPQSVLDKKPSAGLW 192 Query: 475 PHQTDQESL 483 QTD+ + Sbjct: 193 AGQTDEAEM 201 >gi|154151863|ref|YP_001405481.1| NAD+ synthetase [Candidatus Methanoregula boonei 6A8] gi|229485731|sp|A7IAS7|NADE_METB6 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|154000415|gb|ABS56838.1| NAD+ synthetase [Methanoregula boonei 6A8] Length = 248 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 21/198 (10%) Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL AA A+G E V + LP ++PQ L DA LG ++ V+ I ++ F Sbjct: 37 DSALAAAFCCRAIGPEKVLGLSLPASVSNPQDLSDAQELCAMLGMEHRVVLIDPMLAAFK 96 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 ++ E P + N+ +RIR +L +N ++ TSN+SE +GY T YGD + Sbjct: 97 TIPG--FVETP--YLLGNLMARIRMTVLYYHANRDHRLVCGTSNRSEAMLGYCTKYGDNA 152 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAELRPHQTDQES 482 F P+ LYKT V+++A EV IP +ILEK+PSA L Q+D+ Sbjct: 153 ADFQPIVHLYKTDVYEMAK---------------EVKIPKAILEKTPSAGLWAGQSDEGE 197 Query: 483 LP-PYPILDDIIKRIVEN 499 + Y +D +K + N Sbjct: 198 IGLSYAEIDAALKNLEAN 215 >gi|220932738|ref|YP_002509646.1| NH(3)-dependent NAD(+) synthetase [Halothermothrix orenii H 168] gi|219994048|gb|ACL70651.1| NH(3)-dependent NAD(+) synthetase [Halothermothrix orenii H 168] Length = 247 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 17/201 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD + + + ++G+SGGIDSA+ + + A KEN I++P ++S + LEDA Sbjct: 17 IRDKITEAGANGAVVGMSGGIDSAVTSVLCKKAF-KENTLGIIMPC-HSSDKDLEDARLV 74 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A A KY V + + ++F L+ Q VA NI+ R+R L + + ++ Sbjct: 75 ADAFDIKYIVKDLGPVFDNFIELLGADSQTGDDMAVA-NIKPRLRMTTLYYYAARNNYLV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + T N SE++VGY T YGD PL L KT+V +LA + LG IP Sbjct: 134 VGTDNWSELTVGYFTKYGDGGVDIAPLGRLVKTEVRELARY---------LG-----IPE 179 Query: 463 SILEKSPSAELRPHQTDQESL 483 I+++ P+A L Q+D++ + Sbjct: 180 RIIQRPPTAGLWEGQSDEKEM 200 >gi|118475615|ref|YP_892239.1| NAD+ synthetase [Campylobacter fetus subsp. fetus 82-40] gi|118414841|gb|ABK83261.1| NAD+ synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 248 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 23/226 (10%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 N + L Y++++ IG+SGG+DSA+ A + +++P ++ +L Sbjct: 9 NKLLCFLDKYLKQSGASGFSIGVSGGLDSAIVATLCSKV---AKTHALLMPTNSSNNLNL 65 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 ED + L +Y+V+ I +V F S++ + + NI +R+R +L S Sbjct: 66 EDGLILCEKLDLEYEVINIEPIVQSFISVL-----DVTDKLRKANIIARVRMILLYDNSA 120 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++ TSNKSE +GYGT+YGD + NP+ D+YK+ +F A + Sbjct: 121 KLGTLVAGTSNKSERLLGYGTIYGDTACALNPIGDIYKSDLFLFAKYLE----------- 169 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 I +I+ K+PSA+L Q D++ + Y +D ++K +N++ Sbjct: 170 ---IDENIINKAPSADLWEGQKDEDEIGFAYSSVDAVLKEFEKNDQ 212 >gi|226313665|ref|YP_002773559.1| NH(3)-dependent NAD(+) synthetase [Brevibacillus brevis NBRC 100599] gi|226096613|dbj|BAH45055.1| NH(3)-dependent NAD(+) synthetase [Brevibacillus brevis NBRC 100599] Length = 250 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 18/212 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ + N ++G+SGGIDSA+ AA+ V ALG E V + LP Y+ D+ Sbjct: 26 IREQIDGNGLGGAVVGISGGIDSAVTAALCVRALGSERVIGVWLP-AYSQTVHETDSKQL 84 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+A+G + + + + L + N ++R+R +L A++N ++ Sbjct: 85 AEAIGMNLHTVDVGAAYDALVPAIEGVLGLDDK--TKGNTKARLRMTVLYAIANQKGYLV 142 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 T N+SEI VGY T GD FNP+ L K ++ LA+ LG +P Sbjct: 143 ADTCNRSEIHVGYMTKGGDGLADFNPVASLTKHEMRILAAE---------LG-----VPG 188 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDII 493 I+ K PSA+L QTD++ + Y LD ++ Sbjct: 189 EIITKPPSADLWEGQTDEQEMGFTYEDLDRLL 220 >gi|162447420|ref|YP_001620552.1| NAD(+) synthase, glutamine-dependent [Acholeplasma laidlawii PG-8A] gi|161985527|gb|ABX81176.1| NAD(+) synthase, glutamine-dependent [Acholeplasma laidlawii PG-8A] Length = 616 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 83/261 (31%), Positives = 125/261 (47%), Gaps = 25/261 (9%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGC 348 K+IIG+SGG+DS L +A A+ K N + + +P + TS S DA + LG Sbjct: 345 KIIIGISGGLDSTLALLVAHQAIKKLNGDVKDIIGVTMPSQVTSKGSKTDAILLMEKLGI 404 Query: 349 KYDVLPIHDLVN-HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 +PI D V H SL + I EN Q+RIR ILM LSN + +L T + Sbjct: 405 TALEIPIEDQVKLHLESLN----HGGSTDITYENAQARIRTLILMNLSNKHQGFVLGTGD 460 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 SEI++G+ T GD +N + KT V L + H + I SIL + Sbjct: 461 LSEIALGWMTFNGDHMSMYNVNAGVPKTLVQALVKLHSEHNYQD-----IKDILISILNR 515 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVEN---EE--SFINNDQ-----EYNDETVRY 517 S EL+ +Q ++ + Y I D ++ ++EN EE SF+ E +D + Sbjct: 516 PISPELKENQKTEDVIGTYEINDFMLHHLLENGASEEKLSFLVRHTFGLSVEASDLYAKR 575 Query: 518 VEHLLYGSEYKRRQAPVGTKI 538 + + Y S++KR+ P G K+ Sbjct: 576 LLNRFYQSQFKRQVMPEGPKV 596 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 19/176 (10%) Query: 34 NRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ 93 N + L+LF EL ++GY DL F+ +I + A+ + + T G ++G P + Sbjct: 33 NHESSGLVLFPELSLTGYTSGDLFFQLDYINKTNEALSKIMNGTTYQGV-YILGMPLKVG 91 Query: 94 EGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSND--------------PIV 139 + + N V++ I+ V K +LPN EF+EKR F SG++ + +V Sbjct: 92 DALFNVAVVIQNKKILGVIPKYHLPNSKEFNEKRWFQSGFNYELDTVEVLGQTVPFGDMV 151 Query: 140 FR----DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV 191 F+ DI G+ IC+D+W HL GA + +L+ASP K R V Sbjct: 152 FKDELHDIGFGVEICQDMWAIETPGNHLSLSGAHLILNLSASPETMGKQTVRKHTV 207 >gi|327310179|ref|YP_004337076.1| NAD synthetase [Thermoproteus uzoniensis 768-20] gi|326946658|gb|AEA11764.1| NAD synthetase [Thermoproteus uzoniensis 768-20] Length = 284 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 134/287 (46%), Gaps = 35/287 (12%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 EA V LR+Y +++ ++GLSGGIDS++ A + A +N +++P T Sbjct: 14 EAVSRYLVERLREYFEESGAAGGVLGLSGGIDSSVVAVLLARA--TDNFFFLLMPSSSTP 71 Query: 333 PQSLEDAAACAKALGC--KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 P+ +EDA K KY V+PI + V + ++ + NI++R+R + Sbjct: 72 PRDIEDAMKIIKLTRAEGKYAVVPIDEHVKALADAVGVADKK-----IVGNIKARVRMVL 126 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L A + +++ T +KSE+ +GY T YGD P+ DLYKTQV QL Sbjct: 127 LYAYAQKLGYLVVGTGDKSELMLGYFTKYGDGGVDILPIGDLYKTQVRQLG--------- 177 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDII------KRIVENEESF 503 LG +P I+ K PS L QT + L Y +D ++ R E + Sbjct: 178 RCLG-----VPEEIVAKPPSPALWEGQTAEGELGIDYETIDSVLYLRYEEMRTREEIAAM 232 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 + D D+ ++ L+ S++K R P +++ ++ G D YP Sbjct: 233 LGIDVSVVDK----IDSLVRRSQHK-RLPPEIFRLSGRAIGSDWRYP 274 >gi|300710572|ref|YP_003736386.1| NAD+ synthetase [Halalkalicoccus jeotgali B3] gi|299124255|gb|ADJ14594.1| NAD+ synthetase [Halalkalicoccus jeotgali B3] Length = 303 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 15/214 (7%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V++ + V++ +SGGIDS + AAIA +ALG + V + LP T DA A+ L Sbjct: 49 VERADAEGVVVPMSGGIDSTVTAAIAAEALGADRVLALRLPCHKTEYLDATDARTIAEGL 108 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G ++ + + L++ F + ++ + N+ +R+R +N +++L T+ Sbjct: 109 GIEHREVQLRGLLDRFETQVAPTIGPTDERDALGNVVARLRMTCAYYAANVRSSLVLGTA 168 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 N+SE+ +GY T YGD +PL DLYKT+V LA+ +P I+E Sbjct: 169 NRSELLLGYFTKYGDGGADLHPLGDLYKTEVRALATRVG--------------VPRRIVE 214 Query: 467 KSPSAELRPHQTDQESL-PPYPILDDIIKRIVEN 499 K P+A QTD + L PY +LD I+ +++ Sbjct: 215 KDPTAGFWAGQTDADDLGAPYDLLDAILTGLIDE 248 >gi|28210403|ref|NP_781347.1| NAD synthetase [Clostridium tetani E88] gi|28202840|gb|AAO35284.1| NH3-dependent NAD+ synthetase [Clostridium tetani E88] Length = 639 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 128/616 (20%), Positives = 245/616 (39%), Gaps = 89/616 (14%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A P+ V DI N+ ++ EA + + I+F EL I+ Y DL + Sbjct: 15 LNVASACPITNVMDIEFNLTNIKKCINEALNKKVKYIIFPELSITSYSCGDLFLNNQLLN 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY---- 120 + +AI+ L S D + VG P + + N I+ G I+ + K N+ + Sbjct: 75 SSLNAIEELCSFLKDKDILVSVGSPFLYRNSLYNCAFIIHYGKILGIVPKSNICSSEQRW 134 Query: 121 --SEFHEKRTFISGYSNDPIVFR--------DIRLGILICEDIWKNSNICKHLKKQGAEF 170 S F + ++S Y + I F + + ++ ++ + +L +GA Sbjct: 135 FSSGFKIRNEYVSTYFQENIPFGIDLIFQSGNFKFSFVLGDEFNSPIPLSSYLSLKGANI 194 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIY--VNQVGGQDELIFDGASFCFDGQQQ 228 + +L+AS K +KR + + + IY +L++ G + Sbjct: 195 IGNLSASNELVGKSQKRRDFLKTTTQRLSCGYIYSSCGVYESTTDLVYSG-HLLIGEKGN 253 Query: 229 LAFQMKHFSEQN-----------FMTEWHYDQQLSQWNYMSDDSASTM------------ 265 L + K F +N M + L +++ + +A T+ Sbjct: 254 LLKENKRFKRENEIIVSSIDVDSLMLNRLRNTYLEEYSNLCPFNARTINFNFDNLQDFIL 313 Query: 266 --------YIPLQEE----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 +IP +E E +N V +L ++ N +IG+SGG+DS L + V Sbjct: 314 QRDIKKYPFIPYDKEDNRLEEIFNIQVSALAKRLEHTNLKSTVIGISGGLDSTLALLVTV 373 Query: 314 DA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY-DVLPIHDLVNHFFSLMS 367 L +N+ I +P T+ ++ +A K LG ++ + + HF Sbjct: 374 KTFKLLNLDLKNIIAITMPGFGTTDRTYNNAINLCKKLGVSLREIHIVKSCLQHF----- 428 Query: 368 QFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + P+ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 429 EDIGHNPNIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSEMALGWCTFNGDHMSM 488 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QT 478 + + KT + L H T I IL+ S EL P Q Sbjct: 489 YGVNASVPKTLIRYLV----KHVALEEKDKETSSILLDILDTPVSPELLPKDNEGNITQK 544 Query: 479 DQESLPPYPILDDIIKRIVENEES----FINND---QEYNDETV-RYVEHLL---YGSEY 527 + + PY + D + ++ E ++ + ++Y ++ + R++E + + ++ Sbjct: 545 TENIVGPYELHDFFLYYFIKGFEVRKIYYLTCEAFKEDYKEDIIKRWLEFFIKRFFTQQF 604 Query: 528 KRRQAPVGTKITAKSF 543 KR P G K+ S Sbjct: 605 KRSTVPDGPKVGTVSL 620 >gi|297616924|ref|YP_003702083.1| NAD+ synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297144761|gb|ADI01518.1| NAD+ synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 240 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 30/255 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+ VQ+ V+ GLSGGIDSA+ A++ A G ++V I++P + +S Q + DA Sbjct: 10 LKTRVQEAGAQGVVFGLSGGIDSAVVGALSRRAFG-DDVLGIIMPCQ-SSVQDMLDAKLV 67 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQ---EEPSGIVAENIQSRIRGNILMALSNHSK 399 A L ++ + D F++ EE + V NI+ R+R L + Sbjct: 68 ADELSIPCIMVELDDAYQLLLGQYEAFVKIGNEEKARQVKGNIKPRLRMITLYYFAQALG 127 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++ TSN+ E+ VGY T YGD P+ L K+QV +LA + LG Sbjct: 128 YLVVGTSNRDELEVGYFTKYGDGGVDLMPIGALVKSQVRELAKF---------LG----- 173 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 +P I+ K PSA L +QTD+ + +D+ + ++ E + DE VR + Sbjct: 174 VPECIINKVPSAGLYENQTDEAEMGIR--YEDLDRYLLTGEGT---------DEIVRKIR 222 Query: 520 HLLYGSEYKRRQAPV 534 + SE+KRR P+ Sbjct: 223 TMQKLSEHKRRLPPI 237 >gi|258544521|ref|ZP_05704755.1| NH(3)-dependent NAD(+) synthetase [Cardiobacterium hominis ATCC 15826] gi|258520256|gb|EEV89115.1| NH(3)-dependent NAD(+) synthetase [Cardiobacterium hominis ATCC 15826] Length = 248 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 18/189 (9%) Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +G+SGG+DSA+CA + A V +MLP +S L+DA A ++ G +++ I Sbjct: 29 LGVSGGVDSAVCAHLV--ARTGRPVHALMLPAAVSSEADLQDAEAVLQSAGLTGNIISIA 86 Query: 357 DLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 L + ++ L EP ++ N+ +R+R +L + +A++L T N +E+ G Sbjct: 87 PLYDLAMQQLAPVLNPEPERLNVLRGNLMARLRMVLLYTTAQSHRAVVLGTDNAAEVHTG 146 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T YGD + PL L K QV+++A LG +P ++L K+PSA L Sbjct: 147 YFTKYGDGAADVLPLAALRKEQVYEMARL---------LG-----VPQAVLNKAPSAGLW 192 Query: 475 PHQTDQESL 483 QTD++ + Sbjct: 193 AGQTDEDEM 201 >gi|322370487|ref|ZP_08045045.1| NAD+ synthetase [Haladaptatus paucihalophilus DX253] gi|320549904|gb|EFW91560.1| NAD+ synthetase [Haladaptatus paucihalophilus DX253] Length = 287 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 27/251 (10%) Query: 269 LQEEE---ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 L +EE A Y L + +YV++++ + V++G+SGG+DS L A++AVDALG + V ++ Sbjct: 23 LTDEENVAATYRQLTLFIEEYVERSDANGVVVGMSGGVDSTLAASLAVDALGPDRVFGLL 82 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 LP T+ DA A+ALG Y + + LV F L+ + N +R Sbjct: 83 LPCNLTAEAGSHDALTVAEALGIDYREIHLQPLVRCFEDLLVGDEDRDERIRALGNATAR 142 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R L +N ++L T N+SE +GY T +GD PL +LYKT+V LA Sbjct: 143 LRMTCLYYAANTRSKLVLGTGNRSERLLGYFTKHGDGGCDLLPLANLYKTEVRALA---R 199 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESFI 504 G +P I+EK +A L QTD++ L Y +D ++ +V Sbjct: 200 HVG-----------LPCRIVEKPSTAGLWAEQTDEDELGASYDRIDAVLHYVV------- 241 Query: 505 NNDQEYNDETV 515 D+ Y ETV Sbjct: 242 --DRRYRAETV 250 >gi|310779629|ref|YP_003967962.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ilyobacter polytropus DSM 2926] gi|309748952|gb|ADO83614.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ilyobacter polytropus DSM 2926] Length = 276 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 17/224 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ+ P +G++ NI + EA QG +LI+F EL +SGY E++VF Sbjct: 1 MKLAVAQIKPTLGNVEKNIEIMKEKISEALNQGAELIVFPELALSGYLLEEMVF-----D 55 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + L D + + + G + V NS L+ G + K+ LPNY F Sbjct: 56 VCVNVPHEL-VDLSNKISILFGGVEKGKDNYVYNSAFYLEEGKVKHTHRKVYLPNYGMFF 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP------ 178 E R F +G + R+G+LICED W S+ L + GA+++F L +P Sbjct: 115 EARYFKNGDRFRAFDTKFGRIGVLICEDAWHQSS-SYILSQDGADYIFCLMNNPARGFED 173 Query: 179 --YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 Y +K + +T ++ + I N++G +D + F G S Sbjct: 174 EGRYISKEWEAIGYLTASMTGSYF--IMANRIGCEDGVTFGGGS 215 >gi|315453397|ref|YP_004073667.1| NH(3)-dependent NAD(+) synthetase [Helicobacter felis ATCC 49179] gi|315132449|emb|CBY83077.1| NH(3)-dependent NAD(+) synthetase [Helicobacter felis ATCC 49179] Length = 248 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 28/220 (12%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 +L L+ + F + ++G+SGG+DSAL + L +++P + S + EDA Sbjct: 9 LLFLQTQSAQRGFKRFVVGMSGGVDSALVGVLCQRVL---PTHALLMPAIHPS-SATEDA 64 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE--NIQSRIRGNILMALSNH 397 + Y PI + F ++ P + N +R+R N+L S Sbjct: 65 ILLCERFSIPYTQRPIA-------PYEALFKEQNPHVSLGRLGNFCARMRMNLLYDFSME 117 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 A+++ TSNKSEI +GYGTL+GD++ NP+ L+K+QV+ LA + Sbjct: 118 IGALVVGTSNKSEIMLGYGTLFGDLAWLINPIAHLFKSQVYSLAQELD------------ 165 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 IP +IL K+PSA+L Q+D+ L Y ++D +++ I Sbjct: 166 --IPKNILNKAPSADLFSGQSDEADLGFSYALIDPLLQEI 203 >gi|227486404|ref|ZP_03916720.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Anaerococcus lactolyticus ATCC 51172] gi|227235585|gb|EEI85600.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Anaerococcus lactolyticus ATCC 51172] Length = 596 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 129/596 (21%), Positives = 245/596 (41%), Gaps = 77/596 (12%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +KI A +G++ N+ K + +++ + ++++ EL ++G D ++ Sbjct: 1 MKRNIKIKSASFPVSLGNVPENLKKIKELIKKSEEEKVNILSLPELCLTGASLYDAYLEE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +++ + L + + +G P + + G+ N++ ++ +G ++ + K NL Y Sbjct: 61 DLLKSAEDGLKDLIAFSEKFDLAFTIGLPIRTEFGLYNAMALIKSGELMGLVSKENLKPY 120 Query: 121 SEFHEKRTFISG-----------YSNDPIV--FRDIRLGILICEDIWKNSNICKHLKKQG 167 EK F S +P V +++GI I ED LK+ G Sbjct: 121 ----EKTIFESEPRGEFKVLDYRLDEEPFVSIISGLKIGITIGEDEEMTIPKSLKLKEMG 176 Query: 168 AEFLFSLNASPYYHN-----KLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDG 218 + + LN S N K++K E ++ + IYV+ G E +++ G Sbjct: 177 PDII--LNPSAVARNIFTGGKIRKNIEFLSKDV-------IYVHTGAGLGESSTDMVYTG 227 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM---YIPLQEEEAD 275 S+ Q L + F + + +W +N +D+ Y+P E + Sbjct: 228 ESYLAKNGQILDGDTQVFYIEIYNEDWT-----ENFNIFTDEPYRVEKFPYLPKAEYSKE 282 Query: 276 Y-----NACVLSLRDYVQKNNFHKVIIGLSGGIDS-----ALCAAIAVDALGKENVQTIM 325 Y L L ++ KV +G+SGGIDS A+ A + KE + Sbjct: 283 YMEDALEIQALGLLQRMKAVGTEKVFLGVSGGIDSTAVLLAIDKAYEIAGFDKEKIGAYT 342 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P TS ++ +A +ALG + I V + + + + EN Q+R Sbjct: 343 MPAFGTSDRTKSNAYLLCEALGIDLKEINISKSVTAHLHDIGH--DGKTADLAYENAQAR 400 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV-FQLASWR 444 +R +L LSN +++ T + SE G+ T GD + L KT++ + + S+ Sbjct: 401 MRTQVLFDLSNMGGGLVIGTGDLSENMQGFATFNGDHMASYGLNATLMKTELRYLIKSYA 460 Query: 445 NSHGITSGLGPLTEVIPPSI---LEKSPSAELRPHQTDQESLPPYPILDDII-------- 493 + G LT+++ I L + E+ Q ++ + PY +LD I Sbjct: 461 HFTGNDKLKKVLTDILATPISPELVSEKAGEIT--QKTEDIIGPYELLDFFIYHHLTYHK 518 Query: 494 -KRIVENEESFINNDQEYNDETVR-----YVEHLLYGSEYKRRQAPVGTKITAKSF 543 R + E ++ D Y++ T++ Y + S++KR A G +T +SF Sbjct: 519 SARQILTEATYAFGDS-YDEGTIKKWLKSYFKRFAQ-SQFKRSTAVDGPDVTGRSF 572 >gi|283954384|ref|ZP_06371904.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283794001|gb|EFC32750.1| NAD+ synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 191 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 98/180 (54%), Gaps = 20/180 (11%) Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P + ++ +LEDA K L +Y ++ I +++ F E + I N +R Sbjct: 1 MPTQISNKANLEDALRLCKDLELEYKIIEIQSILDAFLRQ-----SESITQIAIGNFAAR 55 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 IR ++L S ++++ TSNKSE+ +GYGT+YGD++ FNP+ +LYK++++ LA N Sbjct: 56 IRMSLLYDYSALKNSLVVGTSNKSELLLGYGTIYGDLACAFNPIGELYKSEIYTLAKHLN 115 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + + ++K+PSA+L +Q+D+ L Y +D+ +K + N+E + Sbjct: 116 LY--------------ENFIKKAPSADLWENQSDEADLGFTYAKIDEGLKALENNDEKLL 161 >gi|78042774|ref|YP_360358.1| NAD+ synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|123576103|sp|Q3ABX6|NADE_CARHZ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|77994889|gb|ABB13788.1| NAD+ synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 243 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ ++ N +++GLSGG+DSA+ A + A ++++ IM P +++P+ EDA Sbjct: 16 LREKTREANASGLLVGLSGGVDSAVVATLIKKAFPEKSLGIIM-PC-FSNPEDEEDARMI 73 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A L KY V+ + + S + EP + NI+ R+R L + + ++ Sbjct: 74 ANHLNLKYIVVNLDEPYQALVSSLKNATPHEPEKLALANIKPRLRMTTLYYWAANLNYLV 133 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 T N++E+ +GY T +GD P+ +L KT+V++ A + LG +P Sbjct: 134 AGTGNRTELEIGYFTKWGDGGVDLLPIGNLTKTEVWEFARY---------LG-----LPE 179 Query: 463 SILEKSPSAELRPHQTDQ 480 I+ K+PSA L QTD+ Sbjct: 180 KIITKAPSAGLWEGQTDE 197 >gi|313898307|ref|ZP_07831844.1| NAD+ synthase [Clostridium sp. HGF2] gi|312956689|gb|EFR38320.1| NAD+ synthase [Clostridium sp. HGF2] Length = 643 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 136/610 (22%), Positives = 237/610 (38%), Gaps = 85/610 (13%) Query: 9 IAQLNPVV--GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A + P V D+ N +R R + L +F EL + Y +DL+++ + C Sbjct: 9 VACITPAVQIADVETNRKTMQRLLHTL-RPDIRLAVFPELSLCAYTCQDLLYQNLLLDDC 67 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +A+ L+ D ++ A + VG P + + N L +I+ + K +PNY+EF+EK Sbjct: 68 LAALKALR-DENESEAILAVGLPLRQGNHLFNCAAFLYKHDILGIVPKTYVPNYNEFYEK 126 Query: 127 RTF----------ISGYSNDP-----IVFRDIRLGILI----CEDIWKNSNICKHLKKQG 167 R F IS + ++ D G +I CED+W G Sbjct: 127 RWFSDSEQRMLDTISLFGKSVPFTPNLLIHDETSGAVIAAEVCEDLWVPIPPSTRHAGHG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A + +L+AS K + R I+T + +Y + + +L+F G D Sbjct: 187 ANVIVNLSASNETVGKSEYRKAIITTHSAKNMCGYVYTSAGVSESTSDLVFSGHDIIADN 246 Query: 226 QQQLAFQMKHFSEQNFMTE------------WHYDQQLSQWNYMSDDSASTMYI--PLQ- 270 ++ E E +H Q+ ++ + T I PLQ Sbjct: 247 GTIISESEILEEEHILYGEIDLEKCRSERLKFHTAMQIQDSCTYTEVTIRTAPITQPLQL 306 Query: 271 ------------EEEADYNACV-------LSLRDYVQKNNFHKVIIGLSGGIDSALC--- 308 EE C+ L ++K N ++IIG+SGG+DS L Sbjct: 307 MRDISPYPFVPGEEAQRSKRCMQILHMQAAGLAQRLKKINCTQLIIGISGGLDSTLALLV 366 Query: 309 AAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A +A + LG + + + +P T+ ++ ++ AL + IHD F + Sbjct: 367 AHMAFERLGLNSKGILAVTMPGFGTTRRTRGNSHKLMAALHTSVKEISIHDACEQHFHDI 426 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + I EN Q+R R ILM L+N ++L T + SE+++G+ T GD + Sbjct: 427 GH--DPKQLDITYENTQARERTQILMDLANTYNGIVLGTGDLSELALGWCTYNGDHMSMY 484 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE----- 481 + KT V L + + +V+ I S EL P + D E Sbjct: 485 GVNASIPKTLVRHLVKTYAQEMRKTEKTDIADVL-DDICATPVSPELLPPKADDEIAQIT 543 Query: 482 --SLPPYPILDDIIKRIVENEE-----------SFINNDQEYNDETVRYVEHLLYGSEYK 528 ++ Y D + ++ N +F +++ +T+R + ++K Sbjct: 544 EDAIGSYAYHDFFLYHMLRNHYAPAKILKLAVLAFPQEERKVILDTMRIFYRRFFTQQFK 603 Query: 529 RRQAPVGTKI 538 R P G K+ Sbjct: 604 RNAMPDGVKV 613 >gi|239618048|ref|YP_002941370.1| NAD+ synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506879|gb|ACR80366.1| NAD+ synthetase [Kosmotoga olearia TBF 19.5.1] Length = 280 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 50/230 (21%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V + F ++G+SGGIDSA+ + V+ALG++ V ++LP + +SP+++ DA K L Sbjct: 13 VYEYEFQGAVVGISGGIDSAVVGKLCVEALGRDRVYGLILPERDSSPETVSDATLVCKYL 72 Query: 347 GCKYDVLPIHDLV-----------------------------------NHFF-SLMSQFL 370 G Y + PI L+ N F L S+ Sbjct: 73 GIDYAIKPITKLLRVMGVYKLEPAAMFIPRKLQENYVRKKMRELSYSDNPFIDDLESKGN 132 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 E G+ ++ R R +L + +++ T+NK+E + G+ +GD + P+ Sbjct: 133 AEFLKGLAYYRVKHRARMCMLYLEAERRNYVVVGTTNKTEEATGFYVKWGDDAVDVEPIM 192 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 LYKTQV+QLA LG +P I K+PS +L P TD+ Sbjct: 193 HLYKTQVYQLAEL---------LG-----VPERIRRKAPSPDLVPGITDE 228 >gi|167044640|gb|ABZ09312.1| putative NAD synthase [uncultured marine crenarchaeote HF4000_APKG7F19] Length = 279 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 97/202 (48%), Gaps = 22/202 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAA 341 L+D V +N VI GLSGGIDS + GK+ + +M P SP S DA Sbjct: 25 LKDAVSQNKADGVIFGLSGGIDSVTVGYLCGKIFGKKALALVM-PDSTVSPSSETGDALK 83 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 LG Y ++ I D+++ +S FL EP N+++RIR NIL +N + Sbjct: 84 AVGELGLDYKLIDI-DIIHKRYS---NFL--EPDERALGNLRARIRANILYYYANLKNLL 137 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +L TS+KSE S+GY T +GD P+ LYKTQ+ + A LG +P Sbjct: 138 VLGTSDKSEYSIGYFTKFGDGCADLLPISKLYKTQLREFAKM---------LG-----VP 183 Query: 462 PSILEKSPSAELRPHQTDQESL 483 +I+ K S L +E L Sbjct: 184 NNIITKKSSPNLWKEHIAEEEL 205 >gi|326773047|ref|ZP_08232331.1| NH(3)-dependent NAD(+) synthetase [Actinomyces viscosus C505] gi|326637679|gb|EGE38581.1| NH(3)-dependent NAD(+) synthetase [Actinomyces viscosus C505] Length = 740 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 141/620 (22%), Positives = 226/620 (36%), Gaps = 144/620 (23%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L V D A N A G+ L F EL ++GY +DL+ + Sbjct: 20 RVAAVTLPVVPVDPAANAAAIIEQARTLAEDGVCLAAFPELCLTGYAIDDLLLSDVLLSD 79 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +AI+TL++ + D +VVG P + + + N +++ G + V K LP Y EF+E Sbjct: 80 VLAAIETLRAASADLLTALVVGAPLRLGDRLYNCALVIQGGRVRGVAPKSYLPTYREFYE 139 Query: 126 KRTFISG-----------------------------YSNDPIVFRDIRLG---------- 146 KR F G S P + G Sbjct: 140 KRHFAPGDALPAGVESIELPGVHGGSDGAERTESADGSGCPETAARVPFGANLLFEVEDV 199 Query: 147 ------ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL 200 + +CED+W GA L +L+ SP + + R E++ S L Sbjct: 200 PGLTFHVEVCEDMWVPVPPSSVAALAGATVLVNLSGSPITVGRAEDR-ELLARSSSARGL 258 Query: 201 PIIYVNQVGGQDE----LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD------QQ 250 YV GQ E L +DG + ++ + L + F + T D ++ Sbjct: 259 -AAYVYAAAGQGESSTDLAWDGQTLVYENGELLG-TTERFPDGPRATVVDVDIEGLRAER 316 Query: 251 LSQWNYMSDDSASTMYIPLQEEEAD----------------------------------- 275 L Q + D+A T+ P+ A Sbjct: 317 LRQGTFA--DNARTLSSPVAGAPASAVTFTDPAAFRRIRIGAADLAAPRTDIGLRRRVDR 374 Query: 276 ---------------YNACVLSLRDYVQK----NNFHKVIIGLSGGIDSA---LCAAIAV 313 Y A + + VQ+ N VI G+SGG+DS + AA A+ Sbjct: 375 FPFVPDDPARLAQDCYEAYNIQVAALVQRLGAIGNPKIVI-GVSGGLDSTHALIVAARAM 433 Query: 314 DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 D LG + ++ I +P TS + +A A LGC ++ L I + M Sbjct: 434 DRLGRPRSDIHAITMPGFATSAGTRRNAEDLAVGLGCTFEELDIRATATQMLTEMGHPYG 493 Query: 372 EE------PSG--------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 E P G + EN+Q+ +R + L ++NH ++L T + SE+++G+ T Sbjct: 494 EYARTGILPEGVSERDLYDVTFENVQAGLRTDFLFRIANHRGGIVLGTGDLSELALGWCT 553 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD + + KT + L W + + T + SIL+ S EL P Sbjct: 554 FGVGDQMAHYGVNAGIPKTLIQHLIRWVVAEELFDDAVGRTLL---SILDTEISPELVPA 610 Query: 477 ------QTDQESLPPYPILD 490 Q+ Q + PY + D Sbjct: 611 EAGGAIQSTQAKIGPYALQD 630 >gi|268608134|ref|ZP_06141861.1| NAD+ synthetase [Ruminococcus flavefaciens FD-1] Length = 254 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 32/220 (14%) Query: 283 LRDYVQKNNF--HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 ++DY ++N K +IG+SGG DS++ AA+ V ALGK+ V +++P Q + Sbjct: 18 VKDYFKENASPETKAVIGISGGKDSSVAAAVCVKALGKDRVIGVLMP------QGEQADI 71 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-----EPSGIVAENIQSRIRGNILMALS 395 C++ L D L I + + +S F+ E EP+ N +RIR L A++ Sbjct: 72 DCSRLL---VDTLGIQNYTINIGETVSSFMGELKKHIEPTNQAIINTPARIRMTTLYAVA 128 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 ++ T N SE VGY T +GD +G F+PL DL T+V Q+ + LG Sbjct: 129 ACVGGRVVNTCNLSEDWVGYSTKFGDAAGDFSPLSDLTVTEVLQVGDY---------LG- 178 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +P ++ K P L +TD+E+L Y +LD I+ Sbjct: 179 ----LPKELVHKVPIDGL-CGKTDEENLGFTYAMLDTYIR 213 >gi|327313508|ref|YP_004328945.1| NAD+ synthase [Prevotella denticola F0289] gi|326945439|gb|AEA21324.1| NAD+ synthase [Prevotella denticola F0289] Length = 656 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 19/192 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+A+ + A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPAVKVADTKFNLAETEKQIAIAEGKGVEVIVFPELSLTGYSCQDLFHQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L TH +VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 DAEQAVLSLLDFTHQLDITAIVGAPVAVGPLLLNCALVIQQGRLLGIVAKTFLPNYSEFY 125 Query: 125 EKRTFIS----------------GYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKK 165 EKR F S + D +FR + I ICED+W + HL Sbjct: 126 EKRWFASSQDLRPQRIHFAGHHISVTPDMQIFRTAQGAKFAIEICEDVWAPTPPSNHLAL 185 Query: 166 QGAEFLFSLNAS 177 GAE +F+L+AS Sbjct: 186 AGAEIIFNLSAS 197 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 20/170 (11%) Query: 266 YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV---DALG 317 +IP E E +N V L + N KVIIG+SGG+DS L +AV D LG Sbjct: 331 FIPKTENMKEACEEIFNIQVCGLAKRMVHTNSRKVIIGISGGLDSTLALLVAVRTFDKLG 390 Query: 318 --KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ---- 371 ++ + I +P T+ ++ +A + LG + IH+ +N S++ F Sbjct: 391 FDRKGIVGITMPGFGTTDRTYRNAMTLMENLG-----ITIHE-INIAASVLQHFKDIGHD 444 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + EN Q+R R ILM LSN +++ T + SE+++G+ T GD Sbjct: 445 ATVHDVTYENAQARERTQILMDLSNQLGGLVIGTGDLSELALGWCTYNGD 494 >gi|313672103|ref|YP_004050214.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Calditerrivibrio nitroreducens DSM 19672] gi|312938859|gb|ADR18051.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Calditerrivibrio nitroreducens DSM 19672] Length = 278 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 11/228 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI I+Q+ P +G+++ NI R+ + A Q D+++F EL ++GY DLV + + Sbjct: 1 MKIYISQIKPFLGNLSKNIDIHRKEIQNAIEQKADIVIFPELSLTGYFLRDLVSDVA-LN 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S +S + D GI+ GF +D+ N+ ++G++ + K+ LPNY+ F Sbjct: 60 KSSEIFKLFESISKD--IGILAGFVYEDENHQFFNAAGYFESGSLKHLHKKVYLPNYTMF 117 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP---YY 180 E R F +G + + + GILICED S++ + QG + L ++ SP +Y Sbjct: 118 EESRYFAAGKNFEAFDMLGSKTGILICEDALHLSSLYLY-SMQGVKNLLIVSNSPARGFY 176 Query: 181 HNKLKKR---HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 ++ + + + +++ + I+VN+VG +D + F G S D Sbjct: 177 SDRFYSQELWYNTIKFIANNLTVNTIFVNRVGVEDGVTFWGGSLAIDA 224 >gi|320160186|ref|YP_004173410.1| putative hydrolase [Anaerolinea thermophila UNI-1] gi|319994039|dbj|BAJ62810.1| putative hydrolase [Anaerolinea thermophila UNI-1] Length = 289 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 38/268 (14%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KL +A+AQ+N V+G++ N+ K EEAN +G DL++F EL ++GY +DL + + Sbjct: 2 KLCLALAQINTVLGNVQKNLEKHLAIIEEANSRGADLVVFPELSLTGYVLQDL----TPM 57 Query: 64 QACSSAID-------TLKSDTHDGGAGIVVGFPRQD-QEGVLNSVVILDAGNIIAVRDKI 115 AC +D S D IVVGF +D + + L G ++ V K+ Sbjct: 58 VACRPRVDDPVFAPLLAASQRLD----IVVGFVEEDVRNRFYIAAAYLSRGKVLHVHRKV 113 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 LP Y F E R F G + R+G+LICED W S L GA+ ++ Sbjct: 114 YLPTYGLFDEGRFFAWGDTVQAFDTSYGRVGMLICEDFWHASP-PYLLWLDGADLFIFMS 172 Query: 176 ASP--------------YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 ASP + ++ L+ + T ++H N+VG +D L F G + Sbjct: 173 ASPGRGVTGKEVLDSSRWVNHILRAYASLYTSFVAH-------TNRVGFEDGLNFWGQAA 225 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 +D L + F E + E +Q Sbjct: 226 LYDPNGDLLAEGPAFEEALTLVEIDLNQ 253 >gi|296241950|ref|YP_003649437.1| NH(3)-dependent NAD(+) synthetase [Thermosphaera aggregans DSM 11486] gi|296094534|gb|ADG90485.1| NH(3)-dependent NAD(+) synthetase [Thermosphaera aggregans DSM 11486] Length = 277 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 23/215 (10%) Query: 273 EADYNACVLSLRD----YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 E DY + ++D Y++ +I+GLSGGIDS+ + +++ K+ + ++LP Sbjct: 9 EIDYEKALAVIKDFVKNYLETTGARNIIVGLSGGIDSSTLFTVLAESVDKDKIVALILPD 68 Query: 329 KYTSP-QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 +P + ++DA + A+ G +Y V+ I +++ F S++ F + + N+++R+R Sbjct: 69 TRVTPKEDVDDAVSLAEKYGVRYYVIEIDRIIDSF-SIIPGF--DINGKLDIGNLRARVR 125 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 I+ +N ++ TS++SE+ +GY T YGD PL L+KTQV L Sbjct: 126 MAIMYYYANRYNGIVAGTSDRSELLIGYFTKYGDGGADILPLGCLFKTQVRMLGRH---- 181 Query: 448 GITSGLGPLTEVIPPSILEKSPSAEL-RPHQTDQE 481 LG +P I+EK S L R H ++E Sbjct: 182 -----LG-----LPKRIIEKPSSPRLWRGHLAEEE 206 >gi|171184728|ref|YP_001793647.1| NAD synthetase [Thermoproteus neutrophilus V24Sta] gi|170933940|gb|ACB39201.1| NAD+ synthetase [Thermoproteus neutrophilus V24Sta] Length = 270 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 18/219 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R YV+ V++GLSGG+DS + AA+AV+ALG E V + +P ++T P+ D A Sbjct: 26 VRSYVEGAGARGVVVGLSGGVDSTVTAALAVEALGPERVLGLFMPSRHTPPEDAADVAEV 85 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AKALG + + I +V F + + + E + NI +R+R IL +N ++ Sbjct: 86 AKALGIRLITVDITPIVESFAKALPGYSESE--RVAVGNIMARVRMTILYYYANRDNLLV 143 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + ++SE+ +GY T YGD P+ LYK QV ++A Sbjct: 144 AGSGDRSELLLGYFTKYGDGGVDILPIGSLYKVQVREMARRLGFR--------------- 188 Query: 463 SILEKSPSAEL-RPHQTDQESLPPYPILDDIIKRIVENE 500 I EK S L + H + E PY +LD ++ I + + Sbjct: 189 RIAEKPSSPRLWQGHTAEGELGAPYEVLDVVLYAIYDRK 227 >gi|304382538|ref|ZP_07365033.1| NAD synthetase [Prevotella marshii DSM 16973] gi|304336369|gb|EFM02610.1| NAD synthetase [Prevotella marshii DSM 16973] Length = 650 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 23/203 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A N V D N A+ + + +++++F EL ++GY +DL +++ + Sbjct: 7 IKVAAAVPNVQVADCDYNAAQIETLIARSEAEDVEIVVFPELSVTGYSCQDLFRQQTLLH 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A++ L T +VG P +LN V++ G ++ + K LPNY+EF+ Sbjct: 67 SAEQAMERLLDFTRSRDVIAIVGCPLSLGNLLLNCAVVIQHGELLGIVPKTFLPNYNEFY 126 Query: 125 EKRTFISG----------------YSNDPIVFRD---IRLGILICEDIWKNSNICKHLKK 165 E+R F S S PI+FR + G+ ICED+W L Sbjct: 127 ERRWFASSRDLQPTEIVFAGKHTIISPAPILFRTQSRVTFGVEICEDVWTPQPPSTRLAL 186 Query: 166 QGAEFLFSLNASPYYHNKLKKRH 188 GAE +F+L+AS N L +H Sbjct: 187 SGAEVIFNLSAS----NDLIGKH 205 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 11/135 (8%) Query: 294 KVIIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 V++G+SGG+DS L + V D LG + + + +P T+ ++ ++A ++LG Sbjct: 353 SVVLGISGGLDSTLALLVCVRAFDKLGYDRRGIVGVTMPGFGTTDRTHDNAVTLMESLGV 412 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 + I V H F + + +PS + EN Q+R R ILM +SN A+++ T Sbjct: 413 TLREINISTAVLHHF----KDIGHDPSIHDVTYENAQARERTQILMDMSNELGAIVVGTG 468 Query: 407 NKSEISVGYGTLYGD 421 + SE+++G+ T GD Sbjct: 469 DLSELALGWATYNGD 483 >gi|288574889|ref|ZP_06393246.1| NAD+ synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570630|gb|EFC92187.1| NAD+ synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 246 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 21/201 (10%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+GLSGGIDSA+ AA+ G EN+ + +P S + A + + + + Sbjct: 32 IVGLSGGIDSAVVAALLKRVFG-ENMLAVKMPCHSLSEDG-DHADLMIDSFDLPWTSVDL 89 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 D+ + F ++ L + + + A NI+ R+R +L AL+ S ++ T NK+E++VGY Sbjct: 90 SDVYDRF----TEILSLDKNSLAAANIKPRLRMTVLYALAQDSNFLVCGTGNKAELTVGY 145 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T +GD PL DL K +V ++A + LG +P I+EK+PSA L Sbjct: 146 FTKHGDSGADLLPLADLTKGEVREVARF---------LG-----VPAVIVEKAPSAGLWE 191 Query: 476 HQTDQESLP-PYPILDDIIKR 495 QTD++ + Y +D+ I R Sbjct: 192 GQTDEKEMGLSYDQIDEYIVR 212 >gi|85709100|ref|ZP_01040166.1| NAD(+) synthetase [Erythrobacter sp. NAP1] gi|85690634|gb|EAQ30637.1| NAD(+) synthetase [Erythrobacter sp. NAP1] Length = 687 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 30/209 (14%) Query: 5 LKIAIAQLNPVVGDIAGNI----AKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 +++A A GD+A N+ A+AR+A E Q +DL+++ EL +S Y +DL + Sbjct: 17 VRVATATPCMRTGDVAYNVKGILAEARKAHE----QNVDLVVYPELCVSSYAIDDLHLQN 72 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + A +A+ T+ + D +VVG P + + N +++ G ++ V K LPNY Sbjct: 73 AMLDASEAALGTIAEQSRDLTPVLVVGAPLRRNSKIYNCAIVIARGEVLGVIPKSYLPNY 132 Query: 121 SEFHEKRTFISG----------------YSNDPIVFRDIRL-----GILICEDIWKNSNI 159 EF+EKR F G + D +VF L G+ ICED W + Sbjct: 133 REFYEKRYFAHGRNCQDLWIGVNGEEVPFGTD-LVFSASNLPGFTFGVEICEDFWAPNPP 191 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 GA L +L+ASP + RH Sbjct: 192 GTLAALAGAHILCNLSASPITIGRADDRH 220 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 11/212 (5%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKY 330 +N V +L +Q ++IG+SGG+DS + AA A D LG + ++ +P Sbjct: 350 FNIQVDALMRRIQATKAKSLVIGISGGLDSTHALIVAAKACDRLGLPRSTIRGYTMPGFG 409 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRG 388 TS + +A + + + I M F + EP + EN+Q+ +R Sbjct: 410 TSDGTKSNAWKLMEVFEITAEEIDIKPAAQRMLEDMGHPFAEGEPVYDVTFENVQAGLRT 469 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 + L L+ ++ T + SE+++G+ T GD + + KT + L W Sbjct: 470 DYLFRLAGQHNGFVIGTGDLSELALGWCTYGVGDHMSHYGVNSGVPKTLIRYLIRWTVQ- 528 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 T P+ + S+ + S EL P D Sbjct: 529 --TEQFLPVCSEVLMSVYDTVISPELVPAGED 558 >gi|332184397|gb|AEE26651.1| NAD synthetase / Glutamine amidotransferase chain of NAD synthetase [Francisella cf. novicida 3523] Length = 249 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 23/203 (11%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +IG+SGGIDSA+ A++AV K + T ++LP K Q ++DA + L ++ ++ Sbjct: 33 VIGISGGIDSAVAASLAV----KTGLPTTALILPSKNNQHQDIQDALELVEKLNIEHHIV 88 Query: 354 PIHDLVNHFFSLMSQFLQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I +F + +F+ + + ++ N Q+R+R L A + +++ T N E Sbjct: 89 TIQPAYENFLASTQEFINTDNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEW 148 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +GY T +GD + PL +L K+QVF+L + + +P +I++K+PSA Sbjct: 149 YMGYFTKFGDGAADIFPLINLKKSQVFELGKYLD--------------VPKNIIDKAPSA 194 Query: 472 ELRPHQTDQESLP-PYPILDDII 493 L QTD++ + Y +DD + Sbjct: 195 GLWQGQTDEDEMGVTYQEIDDFL 217 >gi|312880157|ref|ZP_07739957.1| NH(3)-dependent NAD(+) synthetase [Aminomonas paucivorans DSM 12260] gi|310783448|gb|EFQ23846.1| NH(3)-dependent NAD(+) synthetase [Aminomonas paucivorans DSM 12260] Length = 250 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 32/271 (11%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 IP++ E + L + ++ I+GLSGG+DSA+ AA+ G++ + ++L Sbjct: 4 IPVRNPEGLASFLESWLTERAREAGARGGIVGLSGGVDSAVVAALLRRCFGRDRMLAVLL 63 Query: 327 PYKYTSPQSLEDAAACAKALGC---KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 P ++ P E A A+AL D+ P HD + + E S + N++ Sbjct: 64 PC-HSQPVDAEHAMLVARALDLPTRTVDLGPTHD---ALLASLEAASPEPLSPLSRANLK 119 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 R+R L AL+ ++ T N++E++ GY T +GD PL +L K +V++LA Sbjct: 120 PRLRMTALYALAQTLGYLVCGTGNRAELAYGYFTKHGDSGVDLLPLGNLLKHEVWELA-- 177 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 H LG IPP +++K P+A L P QTD+ + + R ++ S Sbjct: 178 --RH-----LG-----IPPEVVDKPPTAGLWPGQTDEGEM-------GLSYREIDTYLSG 218 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 + Q + +E L SE+KR PV Sbjct: 219 GDVTQAVRER----IEKALLSSEHKRSMPPV 245 >gi|154249562|ref|YP_001410387.1| NAD+ synthetase [Fervidobacterium nodosum Rt17-B1] gi|154153498|gb|ABS60730.1| NAD+ synthetase [Fervidobacterium nodosum Rt17-B1] Length = 294 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 48/244 (19%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 NF +IG+SGG+DSA+ A+ + KEN+ ++LP + +S +S+ DA G Y Sbjct: 24 NFKGAVIGISGGVDSAVVLALLTRTIEKENILALILPERDSSKESVRDAKLVCNYFGVNY 83 Query: 351 DVLPIHDLVNHF--FSLM--SQFLQE---------------EP--------------SGI 377 + PI + +SL + F+ E +P G+ Sbjct: 84 KIFPITGALRKLGAYSLFPPALFIPESIKISYSKKRWERYQDPYIMDLKNEGDELFLKGL 143 Query: 378 VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 I+ R+R L + ++ T+NK+E+++G +GD + P+K LYKTQV Sbjct: 144 AYYRIKHRVRMCKLYMEAEKRGYCVVGTTNKTELALGLYVKWGDDAVDIEPIKHLYKTQV 203 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRI 496 F+LA LG +P I+ K P+ +L P D+++ Y LD I+ I Sbjct: 204 FELA---------KHLG-----VPEKIINKKPTPDLIPGINDEDAFGIEYSKLDKILFSI 249 Query: 497 VENE 500 NE Sbjct: 250 ESNE 253 >gi|152978319|ref|YP_001343948.1| NAD+ synthetase [Actinobacillus succinogenes 130Z] gi|150840042|gb|ABR74013.1| NAD+ synthetase [Actinobacillus succinogenes 130Z] Length = 249 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 95/186 (51%), Gaps = 18/186 (9%) Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +G+SGGIDSA+CA +A A VQ ++LP + TSP+ + DA ++ G ++ I Sbjct: 29 LGVSGGIDSAVCAHLA--ARTGAPVQALILPAEVTSPEDVADAQITLESAGIDGRIISIA 86 Query: 357 DLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + ++ L E ++ N+ +R+R L + ++++L T N +E+ G Sbjct: 87 PWYDLIMLQLTPALNAESERINVLKGNLMARLRMIALFTTAQSHRSIVLGTDNAAEMLTG 146 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T +GD + PL L K QVF+L + LG +P S+LEK PSA L Sbjct: 147 YFTKFGDGAADVLPLARLRKEQVFELGRY---------LG-----VPKSVLEKKPSAGLW 192 Query: 475 PHQTDQ 480 QTD+ Sbjct: 193 AGQTDE 198 >gi|310659784|ref|YP_003937505.1| nh3-dependent nad+ synthetase [Clostridium sticklandii DSM 519] gi|308826562|emb|CBH22600.1| putative NH3-dependent NAD+ synthetase [Clostridium sticklandii] Length = 247 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 27/251 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+DY + KV++G+SGG DS++ AA+ A GKENV I++P + D+ Sbjct: 18 LKDYKESTGLTKVVLGISGGKDSSVVAALCARAYGKENVYGILMP--NGDQIDIADSHKV 75 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 +ALG V+ I + + +++ + +E S NI RIR L A + Sbjct: 76 CEALGINSRVINIKPVYDAELAVL-ESTGDEISVDAKINIAPRIRMMTLYAWGQSHHCRV 134 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 T N SE+++GY T YGD FNP+ +L +V + +G E +P Sbjct: 135 CGTGNLSELTLGYFTKYGDGGVDFNPIANLTSVEVVE-------------VGDTLEELPY 181 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLL 522 ++ K+P+ L ++D+E L E+ +I N + N ETV ++ L Sbjct: 182 DLVHKTPTDGL-SGKSDEERLGLK----------YEDVHKYIRNLELDNQETVEKIKKLE 230 Query: 523 YGSEYKRRQAP 533 + +KR P Sbjct: 231 KAALHKRTSIP 241 >gi|157364458|ref|YP_001471225.1| NAD+ synthetase [Thermotoga lettingae TMO] gi|157315062|gb|ABV34161.1| NAD+ synthetase [Thermotoga lettingae TMO] Length = 281 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 49/254 (19%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 + ++V++ ++ ++G+SGG+DSA+ AA+ V ALG E V ++LP + +S +S++DA Sbjct: 12 ISNFVKEYSYKGAVVGISGGLDSAVVAALCVRALGAEKVFGLILPERDSSKESVKDAKTV 71 Query: 343 AKALGCKYDVLP---------IHDLVNHFF-------------------------SLMSQ 368 + L Y++ P I+ L F L+++ Sbjct: 72 CENLKIHYEIKPATPMLRKLGIYKLFPPAFLFPKSVQERYVLGKWQKLSNDPFIDDLLNK 131 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 +E G+ + RIR IL + ++ T+NK+E G +GD S P Sbjct: 132 GNKEFLKGLAYYRSKHRIRMCILYFEAEKRNYAVVGTTNKTEFLTGLYVKWGDDSVDIEP 191 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYP 487 + LYKTQ+F+LA IP IL+K PS +L P TD+ + Y Sbjct: 192 IAHLYKTQIFELARHLK--------------IPEKILKKPPSPDLIPGITDEYAFGMSYQ 237 Query: 488 ILDDIIKRIVENEE 501 LD I+++I + ++ Sbjct: 238 ELDRILQKIEQKKD 251 >gi|167627632|ref|YP_001678132.1| NAD(+) synthase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668200|ref|ZP_04755778.1| NAD(+) synthase (glutamine-hydrolyzing) [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876735|ref|ZP_05249445.1| NH(3)-dependent NAD(+) synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167597633|gb|ABZ87631.1| NAD(+) synthase (glutamine-hydrolyzing) [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254842756|gb|EET21170.1| NH(3)-dependent NAD(+) synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 249 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 22/192 (11%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +IG+SGGIDSA+ A++AV K + T ++LP K Q ++D K L ++ ++ Sbjct: 33 VIGISGGIDSAVAASLAV----KTGLPTTALILPSKNNQDQDMKDGLELIKNLDIEHHIV 88 Query: 354 PIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 PI + F F Q + ++ N Q+R+R L A + + +++ T N E Sbjct: 89 PIQPAYDTFIESTLNFTNSQNDRQHVIKGNAQARLRMMYLYAYAQQNNRIVIGTDNACEW 148 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +GY T +GD + PL +L K+QVF++ + +P +I++K+PSA Sbjct: 149 YMGYFTKFGDGAADILPLVNLKKSQVFEMGKYLK--------------VPQNIIDKAPSA 194 Query: 472 ELRPHQTDQESL 483 L QTD++ + Sbjct: 195 GLWQGQTDEDEM 206 >gi|260893482|ref|YP_003239579.1| NAD+ synthetase [Ammonifex degensii KC4] gi|260865623|gb|ACX52729.1| NAD+ synthetase [Ammonifex degensii KC4] Length = 243 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 +A V LR+ +++ ++GLSGGIDS++ A + A +N +++P Y+SPQ Sbjct: 8 SALVNWLREQLEETGQKGFVVGLSGGIDSSVAAVLCKRAC-PDNTLGVIMPC-YSSPQDA 65 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMS--QFLQEEPSGIVAENIQSRIRGNILMAL 394 EDA A+ Y + + + L++ +F + I N++ R+R +L Sbjct: 66 EDAELLARTFEIPYVKIRLDAIYAQLAELLTGKRFEELNHRTITLSNLKPRLRMTVLYFF 125 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +N + +++ T N+ E++VG+ T YGD + PL +L K QV ++A + LG Sbjct: 126 ANERQYLVVGTGNRCELTVGHFTKYGDGAADIMPLANLLKFQVQEIARY---------LG 176 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESL 483 IP I+ + PS L QTD E + Sbjct: 177 -----IPERIITRPPSPGLWEGQTDAEGM 200 >gi|260654958|ref|ZP_05860446.1| NAD+ synthetase [Jonquetella anthropi E3_33 E1] gi|260630273|gb|EEX48467.1| NAD+ synthetase [Jonquetella anthropi E3_33 E1] Length = 248 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 107/238 (44%), Gaps = 32/238 (13%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++GLSGG+DSA A + V ALG + V + +P + P DA A+A G + V+ Sbjct: 30 AVLGLSGGLDSATSAGLLVRALGADRVLAVAMPCG-SQPADERDARLVAQAFGLRLAVI- 87 Query: 355 IHDLVNHFFSLMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 DL SL G+ NI+ R+R L AL+ ++ SN +E+ Sbjct: 88 --DLTEAEESLHRALCAAGGVDGLARSNIKPRLRMTSLYALAQSRGYLVCGNSNAAELVT 145 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY T +GD F PL K +V LA LG +P ++EK PSA L Sbjct: 146 GYFTKFGDSGCDFMPLAGFSKREVRLLA---------RSLG-----VPTPVVEKPPSAGL 191 Query: 474 RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 QTD+ + Y +D ++ +E ++ T R +E GSE+KRR Sbjct: 192 WAGQTDESEMGLTYSQIDAFLE------------GRELDETTYRSIERKRNGSEHKRR 237 >gi|304439864|ref|ZP_07399758.1| NAD+ synthetase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371603|gb|EFM25215.1| NAD+ synthetase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 241 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 21/216 (9%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V++ V+ GLSGG+DSA+ AA+ A K++ I++P +++PQ EDA A+ Sbjct: 23 VEEAGLKGVVFGLSGGLDSAVVAALCKRAF-KDDALGIIMPI-HSAPQDEEDARLVAENT 80 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G L DL F + M + E + N++ R+R L + M++ +S Sbjct: 81 GIN---LKKVDLTKTFDAFMES-VDETNVEMSIHNVKPRLRMTTLYYYAQSKSYMVVGSS 136 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 N SE GY T +GD P+ DL KT +F++A + LG +P I++ Sbjct: 137 NYSEYYTGYFTKHGDSGADIFPIVDLLKTDLFEMAKY---------LG-----LPEKIID 182 Query: 467 KSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 K PSA L QTD++ + Y LD I + ++ +E Sbjct: 183 KKPSAGLFEGQTDEDEMGFTYEELDGYIMKEIKLDE 218 >gi|119720350|ref|YP_920845.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermofilum pendens Hrk 5] gi|119525470|gb|ABL78842.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermofilum pendens Hrk 5] Length = 279 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 15/254 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L++ +AQ++ ++GD+ N+ K E A G++++ F EL ++GY DL ++ Sbjct: 1 MRDRLRVGVAQIHSLLGDVRRNLEKHLEYVERARELGVEVLAFPELSLTGYLLRDLAYEV 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPN 119 S A A+ + + G ++VG + + G+ NSV ++ G++ V K+ LP+ Sbjct: 61 S--DAAREALGEIAEASR--GLCVLVGLVHEPRAGIYENSVAVVRDGSVAGVVSKLYLPD 116 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y F E R F G + VF R+ +ICED W + + ++GA+ +F +S Sbjct: 117 YGLFEESRYFREGSCSREGVFECGGWRVAPIICEDAW-HPEPAELAARRGADVVFIHASS 175 Query: 178 PYY-------HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 P N + I + +++ N+VG +DE F G S ++ Sbjct: 176 PIRGLYGSGEANIERVWEAIAVTRAVENACYVVFANRVGPEDEEYFWGGSMVVAPDGEVV 235 Query: 231 FQMKHFSEQNFMTE 244 + K E+ + + Sbjct: 236 ARAKKMEEELLVAD 249 >gi|239827863|ref|YP_002950487.1| NAD+ synthetase [Geobacillus sp. WCH70] gi|239808156|gb|ACS25221.1| NAD+ synthetase [Geobacillus sp. WCH70] Length = 246 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 35/257 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LRD V + I+G+SGGIDSA+ A + A +N +++P K ++P+ +EDA Sbjct: 12 LRDQVADAGLNGAIVGISGGIDSAVVAHLIKRAF-PDNSLGLIMPCK-SNPKDMEDALKV 69 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQE------EPSGIVAENIQSRIRGNILMALSN 396 ++ G K+ ++ + + N F + + L+E E + + N ++R+R L A++N Sbjct: 70 VESCGIKHLIIDLTETHNLLFGEVEKQLKEKGEWNEETARLGDANTRARLRMTTLYAVAN 129 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + M++ T N +E GY T YGD PL K +V ++A LG Sbjct: 130 NYGYMVVGTDNAAEWYTGYFTKYGDGGVDLVPLVHFTKGEVREMARI---------LG-- 178 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESFINNDQEYNDETV 515 +P I+ K+PSA L QTD+ + Y ++D +K +E ++ Sbjct: 179 ---VPNEIITKAPSAGLWEGQTDENEMGTTYEMIDKYLK------------GEEVPEKDR 223 Query: 516 RYVEHLLYGSEYKRRQA 532 + +E L S++KR+ A Sbjct: 224 QIIERLHKRSQHKRQLA 240 >gi|294011086|ref|YP_003544546.1| NAD+ synthase (glutamine-hydrolyzing) [Sphingobium japonicum UT26S] gi|292674416|dbj|BAI95934.1| NAD+ synthase (glutamine-hydrolyzing) [Sphingobium japonicum UT26S] Length = 688 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 132/574 (22%), Positives = 218/574 (37%), Gaps = 88/574 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA A VGD+ N + R ++A DL+LF EL +S Y +DL +++ + Sbjct: 16 VRIAAATPRGSVGDVGANAREIRALAQQAADGAADLVLFPELCLSSYAIDDLHLQEALLD 75 Query: 65 ACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 L +G AG ++VG P + + N +++ G ++ V K LPNY Sbjct: 76 RVEREAAALI----EGSAGWPVLLVGAPLRRGGRLYNCALVIADGRLLGVVPKSYLPNYR 131 Query: 122 EFHEKRTFISG----------------YSNDPIV----FRDIRLGILICEDIWKNSNICK 161 E++EKR F G + D + + D + ICED W Sbjct: 132 EYYEKRWFAPGAGLSGLEIDVGRHVAPFGTDLLFAADGYPDFIFHVEICEDFWAPLPPST 191 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA L +L+AS K + RH + Q Y G+ ++ +DG Sbjct: 192 MGAMAGALILCNLSASNITIGKARDRHLLSASQSVRCQAAYAYSAAGAGESTTDMAWDGQ 251 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS----DDSA----------STM 265 + + + LA + + F + + D Q + M +DSA T+ Sbjct: 252 AMVHELGELLA-ESERFGDAAELLYADVDVQRLRLERMRNGTFNDSAVVAGHPETRFRTV 310 Query: 266 YIPLQEEEAD---------------------------YNACVLSLRDYVQKNNFHKVIIG 298 P + D +N V L + +IG Sbjct: 311 RFPFRRSGGDVGLHRSLTRFPFVPADPAQLAADCYEAFNIQVEGLVTRFRATAGKHFVIG 370 Query: 299 LSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS + AA A D LG + + +P T + +A A ALG + + Sbjct: 371 VSGGLDSTHALIVAAKACDRLGLPRSAILGYTMPGFATGELTKGNAWALMNALGVAGEEI 430 Query: 354 PIHDLVNHFFSLMSQ-FLQEEPS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I M F EP + EN+Q+ +R + L L+N ++ T + SE+ Sbjct: 431 DIRPAARQMLGDMGHPFALGEPVYDVTFENVQAGLRTDYLFRLANRHGGFVVGTGDLSEL 490 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++G+ T GD + + KT + L W + T T I +I+ S Sbjct: 491 ALGWCTYGVGDQMSHYAVNSAIPKTLIQFLIRWCIA---TGQFDAATARILDAIVHTEIS 547 Query: 471 AELRPH------QTDQESLPPYPILDDIIKRIVE 498 EL P Q+ ++ + PY + D + I Sbjct: 548 PELVPAGEDGALQSTEDRVGPYALNDFFLHHIAR 581 >gi|309388525|gb|ADO76405.1| NH(3)-dependent NAD(+) synthetase [Halanaerobium praevalens DSM 2228] Length = 254 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 20/213 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR ++K+ ++GLSGGIDSA+ A + A EN+ T++LP +++PQ EDA Sbjct: 22 LRSELKKSGLKGAVVGLSGGIDSAVTARLCQLAF-PENLLTVILPC-HSNPQDREDALKL 79 Query: 343 AKALGCKYDVLPIHDLVNHFFS-LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A L K + ++ +H S L S ++ S + A NI+ R+R L + + Sbjct: 80 ASELDLKVIENDLSEVYDHLLSNLKSNKIK--GSKLAAANIKPRLRMTSLYYYAQSLSYL 137 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ T NKSE+ +GY T +GD PL L K +V +LA LG IP Sbjct: 138 VVGTDNKSELKIGYFTKHGDGGIDLAPLGSLVKYEVRELA---------KELG-----IP 183 Query: 462 PSILEKSPSAELRPHQTDQESLP-PYPILDDII 493 I+ K PSA L QTD++ + Y LD+ I Sbjct: 184 TEIITKKPSAGLWSGQTDEKEMGFSYQQLDNYI 216 >gi|15922485|ref|NP_378154.1| glutamine-dependent NAD(+) synthetase [Sulfolobus tokodaii str. 7] gi|15623275|dbj|BAB67263.1| 269aa long hypothetical glutamine-dependent NAD(+) synthetase [Sulfolobus tokodaii str. 7] Length = 269 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 36/262 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ +AQ+ P +GD+ N+ K + E + D I+F EL ++GY DLV++ Sbjct: 3 LKVELAQIRPKLGDVKYNLEKHQ---EIISSSSADCIIFPELSLTGYILRDLVYE--VYN 57 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AI+ L + I+ G ++ + G+L + + + I K LP Y F Sbjct: 58 ESEKAIEKLSEEN----KCIIAGLVKEIRPGILRNTAAIIINHQINYIYKFYLPTYGLFE 113 Query: 125 EKRTFISGYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 E+R F G DP ++ ++ G++ICED W I + L GA+ +F ASP Sbjct: 114 ERRYFQPG---DPKRDLKIFEYKGVKFGVIICEDAWHYEPI-EALALLGADSIFIPAASP 169 Query: 179 YYH-----------NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 L K H I+ G + I+VN VG Q+E F G S Sbjct: 170 MRRLSTRLGIQDNWEALLKAHSIING------IWTIFVNNVGSQEEEFFWGGSMVVSPNG 223 Query: 228 QLAFQMKHFSEQNFMTEWHYDQ 249 ++ + K F E +TE + D+ Sbjct: 224 EVINRAKLFEEDIIITEINLDE 245 >gi|319789733|ref|YP_004151366.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermovibrio ammonificans HB-1] gi|317114235|gb|ADU96725.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermovibrio ammonificans HB-1] Length = 282 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 28/251 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ +G++ NI K EA +G L LF EL ++GY +DL F+ + ++ Sbjct: 1 MRVAVAQFRSKLGELEENIRKTVEMAREAKGRGAKLCLFPELNLTGYNLQDLTFEVA-VR 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 + L + + ++VG + E + NS + ++ G I V K+ LP Y F Sbjct: 60 LSDPRLTPLIELSRE--IALIVGLIEESSEHLFYNSALYIEGGAIKHVHRKVYLPTYGMF 117 Query: 124 HEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP--- 178 E R +G N VF + + LICED+W S + QGA +F+L+ASP Sbjct: 118 DEGRFTAAG--NRVEVFSSLAGKSVTLICEDLWHMSTVYLAF-IQGASTIFALSASPGRG 174 Query: 179 YYHNKLKKRHEI----------VTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 Y ++ E+ +TG IY N+VG +D F G SF + + Sbjct: 175 YREKEMFGNAEVWLNMGEFYSRMTGSY------FIYANRVGCEDGFTFSGCSFICNPFGE 228 Query: 229 LAFQMKHFSEQ 239 + Q F E+ Sbjct: 229 VEAQASPFQEE 239 >gi|312110082|ref|YP_003988398.1| NAD+ synthetase [Geobacillus sp. Y4.1MC1] gi|311215183|gb|ADP73787.1| NAD+ synthetase [Geobacillus sp. Y4.1MC1] Length = 246 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 23/219 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LRD V + ++G+SGGIDSA+ A + A +N +++P K ++P+ +EDA Sbjct: 12 LRDQVAGAGLNGAVVGISGGIDSAVVAHLIKRAF-PDNSLGLIMPCK-SNPKDMEDALKV 69 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEE------PSGIVAENIQSRIRGNILMALSN 396 ++ G K+ ++ + + N F + + L+E+ + + N ++R+R L A++N Sbjct: 70 VESCGIKHFIIDLTETHNTLFGEVEKQLKEKGEWNETAARLGDANTRARLRMTTLYAVAN 129 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + M++ T N +E GY T YGD PL K +V ++A LG Sbjct: 130 NYGYMVVGTDNAAEWYTGYFTKYGDGGVDLVPLVHFTKGEVREMARI---------LG-- 178 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIK 494 +P I+ K+PSA L QTD+ + Y I+D +K Sbjct: 179 ---VPDEIITKAPSAGLWEGQTDESEMGTTYEIIDKYLK 214 >gi|258593161|emb|CBE69481.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [NC10 bacterium 'Dutch sediment'] Length = 285 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 15/253 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + + IA+AQ+NP +GD+ N+A + EEA +G L++ EL ++GY +D+V + Sbjct: 1 MSRYTIALAQMNPALGDLERNLALHEKTAEEAIGRGAGLLICPELSLTGYFLKDIVSSVA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNY 120 A S +D L+ + +VVG + E +L N+ + L G I V K+ LP Y Sbjct: 61 LPLA-SPILDRLRDLSRR--IDLVVGLVEESPEHLLYNAALYLSRGEIRHVHRKVYLPTY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E+R G S DI R ILICED+W S C G + L S +ASP Sbjct: 118 GIFDEQRYLAEG-SRIRTFQADIGRSAILICEDMWHPSVACIA-SLDGMDILISPSASPG 175 Query: 180 YHNKLKKRH-------EIVTGQISHVHLP-IIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 + R E + + + ++Y N+VG +D F G S + Sbjct: 176 RGGLEEGRTFANARAWETINRAYAQLFTCYVLYANRVGYEDGACFWGGSEVIAPSGEPVA 235 Query: 232 QMKHFSEQNFMTE 244 + ++ SEQ + E Sbjct: 236 KAEYLSEQILIAE 248 >gi|302392982|ref|YP_003828802.1| NH(3)-dependent NAD(+) synthetase [Acetohalobium arabaticum DSM 5501] gi|302205059|gb|ADL13737.1| NH(3)-dependent NAD(+) synthetase [Acetohalobium arabaticum DSM 5501] Length = 241 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 17/201 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ + + ++GLSGGIDSA+ A + A + IM P Y+SP+ EDA Sbjct: 15 IKEQILEAGCKGAVVGLSGGIDSAVTAVLCKQAFPDSTLGLIM-PC-YSSPEDSEDAELV 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A G + + + ++ + ++ + + E + VA NI+ R+R +L + + ++ Sbjct: 73 ADKFGIEVETVDLNQTFDILYAELEDDDRAEDNMAVA-NIKPRLRMTVLYYYAANLNRLV 131 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + T N+SE+ VGY T +GD PL +L KT+V QLA + IP Sbjct: 132 VGTDNRSELEVGYFTKHGDGGVDIAPLGNLVKTEVRQLAKYLE--------------IPE 177 Query: 463 SILEKSPSAELRPHQTDQESL 483 I+ K P+A L QTD+ L Sbjct: 178 RIITKPPTAGLWSDQTDEAEL 198 >gi|118497863|ref|YP_898913.1| NAD synthase [Francisella tularensis subsp. novicida U112] gi|194323836|ref|ZP_03057612.1| NAD+ synthetase [Francisella tularensis subsp. novicida FTE] gi|254374673|ref|ZP_04990154.1| hypothetical protein FTDG_00848 [Francisella novicida GA99-3548] gi|118423769|gb|ABK90159.1| NAD synthase [Francisella novicida U112] gi|151572392|gb|EDN38046.1| hypothetical protein FTDG_00848 [Francisella novicida GA99-3548] gi|194322200|gb|EDX19682.1| NAD+ synthetase [Francisella tularensis subsp. novicida FTE] Length = 249 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 23/203 (11%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +IGLSGGIDSA+ A++AV K + T ++LP Q ++DA + L ++ + Sbjct: 33 VIGLSGGIDSAVAASLAV----KTGLPTTALILPSDNNQHQDMQDALDLIEMLNIEHYTI 88 Query: 354 PIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I F + +F LQ ++ N Q+R+R L A + +++ T N E Sbjct: 89 SIQPAYEAFLASTQRFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEW 148 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +GY T +GD + PL +L K+QVF+L + + +P +IL+K+PSA Sbjct: 149 YMGYFTKFGDGAADILPLVNLKKSQVFELGKYLD--------------VPKNILDKAPSA 194 Query: 472 ELRPHQTDQESLP-PYPILDDII 493 L QTD++ + Y +DD + Sbjct: 195 GLWQGQTDEDEMGVTYQEIDDFL 217 >gi|254373218|ref|ZP_04988707.1| NAD synthase [Francisella tularensis subsp. novicida GA99-3549] gi|151570945|gb|EDN36599.1| NAD synthase [Francisella novicida GA99-3549] Length = 249 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 19/201 (9%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 +IGLSGGIDSA+ A++AV + ++LP Q ++DA + L ++ + I Sbjct: 33 VIGLSGGIDSAVAASLAVKT--GLPITALILPSDNNQHQDMQDALDLIEMLNIEHYTISI 90 Query: 356 HDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 F + F LQ ++ N Q+R+R L A + +++ T N E + Sbjct: 91 QPAYEAFLASTQSFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEWYM 150 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY T +GD + PL +L K+QVF+L + + +P +IL+K+PSA L Sbjct: 151 GYFTKFGDGAADILPLVNLKKSQVFELGKYLD--------------VPKNILDKAPSAGL 196 Query: 474 RPHQTDQESLP-PYPILDDII 493 QTD++ + Y +DD + Sbjct: 197 WQGQTDEDEMGVTYQEIDDFL 217 >gi|134299514|ref|YP_001113010.1| NAD+ synthetase [Desulfotomaculum reducens MI-1] gi|134052214|gb|ABO50185.1| NH(3)-dependent NAD(+) synthetase [Desulfotomaculum reducens MI-1] Length = 241 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 17/202 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++D V+K ++GLSGGIDS+ AA+ A +NV +++P Y++P+ DA Sbjct: 12 VKDEVEKAGAQGAVVGLSGGIDSSCVAALCKRAF-PDNVLGVIMPC-YSNPEDAADAKLL 69 Query: 343 AKALGCKYDVLPIHDLVNHFFS-LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 AK L Y+ + + + + F L Q + NI+ R+R L SN + Sbjct: 70 AKTLSVPYEEIELDEPFDWFIQRLTGQDYDIHSCDLSIVNIKPRLRMTTLYYYSNRHNYL 129 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ T+NK+E+ VG+ T YGD PL +L K++V LA LG IP Sbjct: 130 VVGTTNKAEMVVGHYTKYGDGGADILPLANLAKSEVRALA---------KELG-----IP 175 Query: 462 PSILEKSPSAELRPHQTDQESL 483 I++K+PSA L D++ + Sbjct: 176 QRIIDKAPSAGLWFGHCDEKEM 197 >gi|156502091|ref|YP_001428156.1| NAD+ synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|290954539|ref|ZP_06559160.1| NAD+ synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295312055|ref|ZP_06802870.1| NAD+ synthetase [Francisella tularensis subsp. holarctica URFT1] gi|156252694|gb|ABU61200.1| NAD+ synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 249 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 23/203 (11%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +IGLSGGIDSA+ A++AV K + T ++LP Q ++DA + L ++ + Sbjct: 33 VIGLSGGIDSAVAASLAV----KTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTI 88 Query: 354 PIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I F + F LQ ++ N Q+R+R L A + +++ T N E Sbjct: 89 SIQPAYEAFLASTQSFTNLQNNRQLVIKGNAQTRLRMMYLYAYAQQYNRIVIGTDNACEW 148 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +GY T +GD + PL +L K+QVF+L + + +P +IL+K+PSA Sbjct: 149 YMGYFTKFGDGAADILPLVNLKKSQVFELGKYLD--------------VPKNILDKAPSA 194 Query: 472 ELRPHQTDQESLP-PYPILDDII 493 L QTD++ + Y +DD + Sbjct: 195 GLWQGQTDEDEMGVTYQEIDDFL 217 >gi|325860304|ref|ZP_08173426.1| NAD+ synthase [Prevotella denticola CRIS 18C-A] gi|325482183|gb|EGC85194.1| NAD+ synthase [Prevotella denticola CRIS 18C-A] Length = 656 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 19/192 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+A+ + A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPAVKVADTKFNLAETEKQIAIAEGKGVEVIVFPELSLTGYSCQDLFHQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L T +VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 DAEQAVLSLLDFTRQLDITAIVGAPVAVGPLLLNCALVIQQGRLLGIVAKTFLPNYSEFY 125 Query: 125 EKRTFIS----------------GYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKK 165 EKR F S + D +FR + I ICED+W + HL Sbjct: 126 EKRWFASSQDLRPQRIHFAGHHISVTPDMQIFRTAQGAKFAIEICEDVWAPTPPSNHLAL 185 Query: 166 QGAEFLFSLNAS 177 GAE +F+L+AS Sbjct: 186 AGAEIIFNLSAS 197 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%) Query: 266 YIPLQEE-----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV---DALG 317 +IP E E +N V L + N KVIIG+SGG+DS L +AV D LG Sbjct: 331 FIPKTENMKEACEEIFNIQVCGLAKRMVHTNSRKVIIGISGGLDSTLALLVAVRTFDKLG 390 Query: 318 --KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ---- 371 ++ + + +P T+ ++ +A + LG + IH+ +N S++ F Sbjct: 391 FDRKGIVGVTMPGFGTTDRTYRNAMTLMENLG-----ITIHE-INIAASVLQHFKDIGHD 444 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + EN Q+R R ILM LSN +++ T + SE+++G+ T GD Sbjct: 445 ATVHDVTYENAQARERTQILMDLSNQLGGLVIGTGDLSELALGWCTYNGD 494 >gi|119720349|ref|YP_920844.1| NAD+ synthetase [Thermofilum pendens Hrk 5] gi|119525469|gb|ABL78841.1| NH(3)-dependent NAD(+) synthetase [Thermofilum pendens Hrk 5] Length = 279 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 26/253 (10%) Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLPIHDLVN 360 DSA+ A + ALG EN +LP T + +EDA +ALG ++V+ + ++ Sbjct: 43 DSAVVAFLTARALGPENTYCYVLPSFATPKEDVEDALRVIEALGLPDGNWEVISVDPILK 102 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + + N+ +RIR IL + A+++ T +KSE+ +GY T YG Sbjct: 103 SFEEVLGEM-----DRVARGNVMARIRMIILHEKAYAHNALVIGTGDKSELLLGYFTKYG 157 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D P+ LYKT V QLA + LG +P I+EK S L P QT + Sbjct: 158 DGGVDVLPIGGLYKTHVRQLARY---------LG-----VPERIVEKPSSPRLWPGQTAE 203 Query: 481 ESL-PPYPILDDIIKRIVEN--EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 L PY ++D ++ E E I + V+ + ++ S++K R P Sbjct: 204 GELGAPYELVDSVLYLRFEKWLPEERIAEELGVEVGVVKRILEMVKRSQHK-RMMPEVFH 262 Query: 538 ITAKSFGRDRLYP 550 + + G D YP Sbjct: 263 VGQRDLGSDWRYP 275 >gi|56708321|ref|YP_170217.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|89256074|ref|YP_513436.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. holarctica LVS] gi|110670792|ref|YP_667349.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. tularensis FSC198] gi|115314550|ref|YP_763273.1| NAD(+) synthase (glutamine-hydrolyzing) [Francisella tularensis subsp. holarctica OSU18] gi|167009801|ref|ZP_02274732.1| NAD(+) synthase (glutamine-hydrolyzing) [Francisella tularensis subsp. holarctica FSC200] gi|187931797|ref|YP_001891782.1| NAD+ synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|224457441|ref|ZP_03665914.1| NAD+ synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254367407|ref|ZP_04983433.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. holarctica 257] gi|254369082|ref|ZP_04985094.1| hypothetical protein FTAG_00010 [Francisella tularensis subsp. holarctica FSC022] gi|254370804|ref|ZP_04986809.1| NAD synthase [Francisella tularensis subsp. tularensis FSC033] gi|254875141|ref|ZP_05247851.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|224510802|pdb|3FIU|A Chain A, Structure Of Nmn Synthetase From Francisella Tularensis gi|224510803|pdb|3FIU|B Chain B, Structure Of Nmn Synthetase From Francisella Tularensis gi|224510804|pdb|3FIU|C Chain C, Structure Of Nmn Synthetase From Francisella Tularensis gi|224510805|pdb|3FIU|D Chain D, Structure Of Nmn Synthetase From Francisella Tularensis gi|56604813|emb|CAG45892.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|89143905|emb|CAJ79124.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. holarctica LVS] gi|110321125|emb|CAL09275.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. tularensis FSC198] gi|115129449|gb|ABI82636.1| NAD(+) synthase (glutamine-hydrolyzing) [Francisella tularensis subsp. holarctica OSU18] gi|134253223|gb|EBA52317.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. holarctica 257] gi|151569047|gb|EDN34701.1| NAD synthase [Francisella tularensis subsp. tularensis FSC033] gi|157122032|gb|EDO66172.1| hypothetical protein FTAG_00010 [Francisella tularensis subsp. holarctica FSC022] gi|187712706|gb|ACD31003.1| NAD+ synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|254841140|gb|EET19576.1| NH(3)-dependent NAD(+) synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159552|gb|ADA78943.1| NAD(+) synthase (glutamine-hydrolyzing) [Francisella tularensis subsp. tularensis NE061598] gi|332678578|gb|AEE87707.1| NMN synthetase [Francisella cf. novicida Fx1] Length = 249 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 23/203 (11%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +IGLSGGIDSA+ A++AV K + T ++LP Q ++DA + L ++ + Sbjct: 33 VIGLSGGIDSAVAASLAV----KTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTI 88 Query: 354 PIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I F + F LQ ++ N Q+R+R L A + +++ T N E Sbjct: 89 SIQPAYEAFLASTQSFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEW 148 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +GY T +GD + PL +L K+QVF+L + + +P +IL+K+PSA Sbjct: 149 YMGYFTKFGDGAADILPLVNLKKSQVFELGKYLD--------------VPKNILDKAPSA 194 Query: 472 ELRPHQTDQESLP-PYPILDDII 493 L QTD++ + Y +DD + Sbjct: 195 GLWQGQTDEDEMGVTYQEIDDFL 217 >gi|62258565|gb|AAX77805.1| unknown protein [synthetic construct] Length = 284 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 23/203 (11%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +IGLSGGIDSA+ A++AV K + T ++LP Q ++DA + L ++ + Sbjct: 59 VIGLSGGIDSAVAASLAV----KTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTI 114 Query: 354 PIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I F + F LQ ++ N Q+R+R L A + +++ T N E Sbjct: 115 SIQPAYEAFLASTQSFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEW 174 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +GY T +GD + PL +L K+QVF+L + + +P +IL+K+PSA Sbjct: 175 YMGYFTKFGDGAADILPLVNLKKSQVFELGKYLD--------------VPKNILDKAPSA 220 Query: 472 ELRPHQTDQESLP-PYPILDDII 493 L QTD++ + Y +DD + Sbjct: 221 GLWQGQTDEDEMGVTYQEIDDFL 243 >gi|295399358|ref|ZP_06809340.1| NAD+ synthetase [Geobacillus thermoglucosidasius C56-YS93] gi|294978824|gb|EFG54420.1| NAD+ synthetase [Geobacillus thermoglucosidasius C56-YS93] Length = 246 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 23/219 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LRD V + ++G+SGGIDSA+ A + A +N +++P K ++P+ +EDA Sbjct: 12 LRDQVTGAGLNGAVVGISGGIDSAVVAHLIKRAF-PDNSLGLIMPCK-SNPKDMEDALKV 69 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEE------PSGIVAENIQSRIRGNILMALSN 396 ++ G K+ ++ + + N F + + L+E+ + + N ++R+R L A++N Sbjct: 70 VESCGIKHFIIDLTETHNTLFGEVEKQLKEKGEWNETAARLGDANTRARLRMTTLYAVAN 129 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + M++ T N +E GY T YGD PL K +V ++A LG Sbjct: 130 NYGYMVVGTDNAAEWYTGYFTKYGDGGVDLVPLVHFTKGEVREMARV---------LG-- 178 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIK 494 +P I+ K+PSA L QTD+ + Y ++D +K Sbjct: 179 ---VPDEIITKAPSAGLWEGQTDESEMGTTYEMIDKYLK 214 >gi|255617895|ref|XP_002539889.1| glutamine-dependent NAD(+) synthetase, putative [Ricinus communis] gi|223501421|gb|EEF22494.1| glutamine-dependent NAD(+) synthetase, putative [Ricinus communis] Length = 276 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 23/261 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA A + D+A N A +A+ +DL++F EL +S Y +DL+ + + I+ Sbjct: 16 VRIATATPSSRTADVAFNTAGVLAEARKAHDANVDLVVFPELTLSSYAIDDLLLQHALIE 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ + + + D +V+G P + + + N V++ G I+ V K LPNY EF+ Sbjct: 76 RVEAALAEVVAASADLHPVLVLGAPLKRADKLYNCAVVIAHGQILGVVPKSFLPNYREFY 135 Query: 125 EKRTFISG----------------YSNDPIV----FRDIRLGILICEDIWKNSNICKHLK 164 EKR F G + D I R G+ ICED W Sbjct: 136 EKRHFAHGRGCTDLWMALAGEEVPFGTDLIFAAANLPGFRFGVEICEDFWAPVPPGMQAA 195 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+ASP + RH S +Y G+ +L +DG S Sbjct: 196 MAGALILCNLSASPVTIGRADDRHLHCRSSASRAIAAYVYSASGYGESTTDLAWDGQSVI 255 Query: 223 FDGQQQLAFQMKHFSEQNFMT 243 ++ LA Q + F +T Sbjct: 256 YEMSTLLA-QSERFDRAGELT 275 >gi|304373295|ref|YP_003856504.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma hyorhinis HUB-1] gi|304309486|gb|ADM21966.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma hyorhinis HUB-1] gi|330723831|gb|AEC46201.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma hyorhinis MCLD] Length = 243 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 31/261 (11%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 N V +++ V+K N VI+G+SGGIDSAL A +A A +++ +M + + L Sbjct: 9 NYLVNWIKNQVKKANKSGVIVGISGGIDSALVAVLAKKAFPNDSLGLVMKIKDMS--KDL 66 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 +D + K + + + ++ +F + L+++ S N+Q R+R + L A++ Sbjct: 67 QDISKLVKKFDIQTREINLSNIYENFVDTLK--LEDKMS---LANLQPRLRMSTLYAIAQ 121 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++L T N E+ +GY T YGD P+ +L KTQV+ LA LG Sbjct: 122 EKNYLVLGTDNLVEMYIGYFTKYGDGGVDLLPIVNLSKTQVYNLA---------KELG-- 170 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVR 516 I IL K+PSA L +Q D+ D +K ++ + F+ + + V Sbjct: 171 ---INEEILNKAPSAGLWENQKDE----------DEMKFSYKDFDQFLQDKSKLKKSVVD 217 Query: 517 YVEHLLYGSEYKRRQAPVGTK 537 +E+L S++KR + P +K Sbjct: 218 RIEYLHEISQHKRNKIPRPSK 238 >gi|307298188|ref|ZP_07577992.1| NAD+ synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916274|gb|EFN46657.1| NAD+ synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 279 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 48/232 (20%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD + K + +IG+SGGIDSA+ +AV+ALGKE + +++P + +S ++ D+ Sbjct: 8 IRDSIMKYGYKGAVIGISGGIDSAVVGKLAVEALGKEKIFGLLMPERDSSRDTIRDSKLV 67 Query: 343 AKALGCKYDVLPIHDLVNHFFS--------LMSQFLQEE--------------------- 373 AK LG + V I + + L+ Q ++E+ Sbjct: 68 AKFLGIDFKVKNISSALRAIGTYKLQPPAFLIPQTIKEKYVKHKWEELSSDPFLDDLCNE 127 Query: 374 -----PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 G+ + R+R L + +L T+NK+E+ G +GD S P Sbjct: 128 GNDEFRRGLAYYRSKHRVRMISLYLEAEKRGYAVLGTTNKTELLCGLYVKWGDDSSDIEP 187 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 ++ L+KT+V +LA G L IP I+EK PS +L P TD+ Sbjct: 188 IRHLFKTEVIELA------------GQLQ--IPSRIIEKPPSPDLIPGVTDE 225 >gi|302392581|ref|YP_003828401.1| NH(3)-dependent NAD(+) synthetase [Acetohalobium arabaticum DSM 5501] gi|302204658|gb|ADL13336.1| NH(3)-dependent NAD(+) synthetase [Acetohalobium arabaticum DSM 5501] Length = 240 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 20/201 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++D V+ ++GLSGGIDS++ A ++ A K + IM P + S Q DA Sbjct: 17 IQDKVESAGCQGAVVGLSGGIDSSVTAVLSKMAFPKRTLGLIM-PCESNS-QDRRDAQLV 74 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A Y+++ +++ +N S + F + P NI+ R+R +L +++ Sbjct: 75 ADEFDIDYEIVDLNNTLNTLLSAVDNFDDKMPKA----NIKPRLRMTVLYYYGQLRNSLV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + T N+SE+ +GY T +GD P+ +L KT+V ++A L E IP Sbjct: 131 IGTDNRSELKLGYFTKHGDGGIDLAPMGNLVKTEVREVAK-------------LLE-IPN 176 Query: 463 SILEKSPSAELRPHQTDQESL 483 I+ K+PSA L QTD+ L Sbjct: 177 RIINKAPSAGLWADQTDESEL 197 >gi|134301725|ref|YP_001121693.1| NAD+ synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|134049502|gb|ABO46573.1| NAD+ synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 249 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 23/203 (11%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +IGLSGGIDSA+ A++AV K + T ++LP Q ++DA + L ++ + Sbjct: 33 VIGLSGGIDSAVAASLAV----KTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTI 88 Query: 354 PIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I F + F LQ ++ N Q+R+R L A + +++ T N E Sbjct: 89 SIQLAYEAFLASTQSFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEW 148 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +GY T +GD + PL +L K+QVF+L + + +P +IL+K+PSA Sbjct: 149 YMGYFTKFGDGAADILPLVNLKKSQVFELGKYLD--------------VPKNILDKAPSA 194 Query: 472 ELRPHQTDQESLP-PYPILDDII 493 L QTD++ + Y +DD + Sbjct: 195 GLWQGQTDEDEMGVTYQEIDDFL 217 >gi|302389942|ref|YP_003825763.1| NH(3)-dependent NAD(+) synthetase [Thermosediminibacter oceani DSM 16646] gi|302200570|gb|ADL08140.1| NH(3)-dependent NAD(+) synthetase [Thermosediminibacter oceani DSM 16646] Length = 237 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 21/218 (9%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 +A V L++ + + + GLSGGIDSA+ A+ A EN +++P Y++ + Sbjct: 8 DALVDWLKERINEAGARGAVFGLSGGIDSAVVGALCKRAF-PENCLGLIMPC-YSNSKDE 65 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 EDA A+ G + + + + + F ++ L + + + NI+ R+R L + Sbjct: 66 EDAVKVAEKFGIPHKKIVLDGVYDEFLNI----LDKTDNRVAVANIKPRLRMITLYYYAT 121 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++ T NKSE++VGY T YGD PL +L K QV +LA + LG Sbjct: 122 LNNYLVVGTGNKSELTVGYFTKYGDGGVDLLPLGNLVKKQVRELAVY---------LG-- 170 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDII 493 IP I+EK P+ L QTD+ + Y LD+ I Sbjct: 171 ---IPRDIIEKPPTGGLWEGQTDEGEMGITYEELDNFI 205 >gi|208779928|ref|ZP_03247272.1| NAD+ synthetase [Francisella novicida FTG] gi|208744383|gb|EDZ90683.1| NAD+ synthetase [Francisella novicida FTG] Length = 249 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 23/203 (11%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +IGLSGGIDSA+ A++AV K + T ++LP Q ++DA + L ++ + Sbjct: 33 VIGLSGGIDSAVAASLAV----KTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYSI 88 Query: 354 PIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I F + F LQ ++ N Q+R+R L A + +++ T N E Sbjct: 89 SIQPTYEAFLASTQSFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEW 148 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +GY T +GD + PL +L K+QVF+L + + +P +IL+K+PSA Sbjct: 149 YMGYFTKFGDGAADILPLVNLKKSQVFELGKYLD--------------VPKNILDKAPSA 194 Query: 472 ELRPHQTDQESLP-PYPILDDII 493 L QTD++ + Y +DD + Sbjct: 195 GLWQGQTDEDEMGVTYQEIDDFL 217 >gi|327310178|ref|YP_004337075.1| Amidohydrolase [Thermoproteus uzoniensis 768-20] gi|326946657|gb|AEA11763.1| Amidohydrolase, putative [Thermoproteus uzoniensis 768-20] Length = 271 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 36/252 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I +AQ+ P +GD+ N+ K + E ++ D ++F EL ++GY +DL F+ + Sbjct: 3 LRIELAQIRPFLGDVERNLIKHKEIVETSDS---DCVVFPELSLTGYVLKDLAFE--LFR 57 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 A++ L GG +V G ++ + GVL NS ++ G I V K LP Y F Sbjct: 58 HSEKAVEKLADAA--GGKCVVAGAIKEVRPGVLRNSAAVIINGEINYVY-KFYLPTYGLF 114 Query: 124 HEKRTFISGYSNDPI----VFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 E+R F G DP+ VF+ ++ G++ICED W + + L GA+ + AS Sbjct: 115 EERRYFQRG---DPLKDLKVFQHAGVKFGVIICEDAW-HPEPAEALALMGADLILVPAAS 170 Query: 178 PYYH-----------NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 P L K H ++ + + +VN VG Q+E F G S Sbjct: 171 PMRRLGKDLAIQESWEALLKAHALMNT------VWMAFVNTVGSQEEEFFWGGSMVVSPL 224 Query: 227 QQLAFQMKHFSE 238 ++ ++K F E Sbjct: 225 GEVKLRLKIFEE 236 >gi|254459038|ref|ZP_05072461.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Campylobacterales bacterium GD 1] gi|207084309|gb|EDZ61598.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Campylobacterales bacterium GD 1] Length = 238 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 15/238 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ +P + N+ + EE + DLI+F EL ++GY +D +++ ++ + Sbjct: 1 MRVTLAQTSPKLN--RSNLDYICKTIEEFKDKS-DLIVFCELSLNGYLLQDKLYEDAWNK 57 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S ++ L S+ IVVG +D+E N+ + G +++ +K++LPNY F Sbjct: 58 DELSLLEDLSSEID-----IVVGGAMKDKEAFRNAALYFSKGKLLSQHNKVHLPNYGMFE 112 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP---YYH 181 E R F +G + + + +L+CED+W +S + L K+ + + +L ASP + Sbjct: 113 EARYFKAGEIFESFTSQFGKTSMLVCEDLWHDS-VHHDLIKENPDLIIALVASPARGFTE 171 Query: 182 NKL---KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 L K + I+ S +I+VN+VG +D L F G S + + Q+ + Sbjct: 172 EGLVIENKWYSIIKTVASECSAELIFVNRVGFEDGLGFWGGSCIVEKNGSIRHQLPRY 229 >gi|297529241|ref|YP_003670516.1| NAD+ synthetase [Geobacillus sp. C56-T3] gi|297252493|gb|ADI25939.1| NAD+ synthetase [Geobacillus sp. C56-T3] Length = 246 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 23/219 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LRD V + ++G+SGGIDSA+ A + A +++ IM P K ++P+ +EDA Sbjct: 12 LRDQVSSAGLNGAVVGISGGIDSAVVAHLIKRAFPDDSLGLIM-PCK-SNPKDMEDALKV 69 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQ------EEPSGIVAENIQSRIRGNILMALSN 396 K+ G ++ V+ + + F + L+ EE + + N ++R+R L A++N Sbjct: 70 VKSCGIRHLVIDLTEAHRTLFGAVEAELKAIGEWSEERARLGDANTRARLRMTTLYAVAN 129 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++ T N +E GY T YGD PL K +V ++ LG Sbjct: 130 NYGYLVVGTDNAAEWHTGYFTKYGDGGVDLVPLIHFTKGEVREMGRL---------LG-- 178 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIK 494 +P I++K+PSA L QTD+ + Y ++D +K Sbjct: 179 ---VPEEIIKKAPSAGLWEGQTDESEMGTTYEMIDKYLK 214 >gi|257783992|ref|YP_003179209.1| NAD+ synthetase [Atopobium parvulum DSM 20469] gi|257472499|gb|ACV50618.1| NAD+ synthetase [Atopobium parvulum DSM 20469] Length = 676 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 29/251 (11%) Query: 7 IAIAQLNPVV--GDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 I +A + P V D+A N+ A EEA +G +++ EL I+GY EDL ++ + + Sbjct: 6 IKVASITPRVRVADVAFNVESCLAAIEEAAGNRGAKVVVLPELCITGYTCEDLFWQDALL 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + ++ + T D A +++G P + + N +L G ++ + K +P Y+EF Sbjct: 66 DAAERGLVSIAARTADVDALLLLGLPVRVASKLYNCAAVLFRGELLGLVPKRYVPMYNEF 125 Query: 124 HEKRTFISG----------------------YSNDPIVFRDIRLGILICEDIWKNSNICK 161 +E R F+SG ++ D I ++ +G ICED+W Sbjct: 126 YEGRHFVSGPKTVTSVDFGLLGEVPFGTNQLFACDTI--PELVVGAEICEDLWVPMPPSN 183 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA + +L+ASP K R ++V Q + + Y + G+ +L+F G Sbjct: 184 SHAVAGATLICNLSASPALAGKSAYRRQLVAQQSARLICGYAYASAGEGESTTDLVFSGH 243 Query: 220 SFCFDGQQQLA 230 + + + LA Sbjct: 244 NLVVENGRVLA 254 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 32/277 (11%) Query: 296 IIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IG+SGG+DS L + V D LG + + + +P T+ ++ +A ++LG Sbjct: 377 VIGISGGLDSTLALLVTVRAFDQLGYDRSGIVAVTMPGFGTTDRTYTNAIELVQSLGADL 436 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I D V F+ + +V EN Q+R R ILM ++N M++ T + SE Sbjct: 437 REISIVDSVLQHFADIDHDQDI--HDVVYENAQARERTQILMDVANQVGGMVIGTGDLSE 494 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++G+ T GD + + KT V L + G + V+ +L+ S Sbjct: 495 LALGWATYNGDQMSMYGINASVPKTLVRYLVDYCADTYEEQGEDEIAHVL-RDVLDTPVS 553 Query: 471 AELRPHQTD-------QESLPPYPILDDIIKRIVEN-----------EESF-INNDQE-Y 510 EL P D ++ + PY + D + ++ + E +F + D E Y Sbjct: 554 PELLPSAADGSIEQKTEDLVGPYELHDFFLFHVLRHGSGPLKVLRLAECAFGTDTDHEVY 613 Query: 511 NDETVRYVEHLLY----GSEYKRRQAPVGTKITAKSF 543 + ET+ + + Y ++KR P G K+ + S Sbjct: 614 DHETIVHWLKVFYRRFFSQQFKRSAMPDGPKVGSVSL 650 >gi|56421131|ref|YP_148449.1| NH(3)-dependent NAD+ synthetase [Geobacillus kaustophilus HTA426] gi|261418389|ref|YP_003252071.1| NAD+ synthetase [Geobacillus sp. Y412MC61] gi|319767652|ref|YP_004133153.1| NAD+ synthetase [Geobacillus sp. Y412MC52] gi|56380973|dbj|BAD76881.1| NH(3)-dependent NAD+ synthetase [Geobacillus kaustophilus HTA426] gi|261374846|gb|ACX77589.1| NAD+ synthetase [Geobacillus sp. Y412MC61] gi|317112518|gb|ADU95010.1| NAD+ synthetase [Geobacillus sp. Y412MC52] Length = 246 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 23/225 (10%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 + V LRD V + ++G+SGGIDSA+ A + A +++ IM P K ++P+ + Sbjct: 6 DKLVQWLRDQVSSAGLNGAVVGISGGIDSAVVAHLIKRAFPDDSLGLIM-PCK-SNPKDM 63 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ------EEPSGIVAENIQSRIRGNI 390 EDA K+ G ++ V+ + + F + L+ EE + + N ++R+R Sbjct: 64 EDALKVVKSCGIRHLVIDLTEAHRTLFGAVEAELKAIGEWSEERARLGDANTRARLRMTT 123 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L A++N+ +++ T N +E GY T YGD PL K +V ++ Sbjct: 124 LYAVANNYGYLVVGTDNAAEWHTGYFTKYGDGGVDLVPLIHFTKGEVREMGRL------- 176 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIK 494 LG +P I++K+PSA L QTD+ + Y ++D +K Sbjct: 177 --LG-----VPEEIIKKAPSAGLWEGQTDESEMGTTYEMIDKYLK 214 >gi|150390002|ref|YP_001320051.1| NAD+ synthetase [Alkaliphilus metalliredigens QYMF] gi|254766702|sp|A6TQC4|NADE_ALKMQ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|149949864|gb|ABR48392.1| NAD+ synthetase [Alkaliphilus metalliredigens QYMF] Length = 247 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 23/223 (10%) Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 V LR+ V+++ +++G+SGGIDSA+ A + A +++ I LP + + ++D Sbjct: 10 VVAWLREQVEESGTTGLVVGISGGIDSAVVANLIYRAFPNQSLGVI-LPIR-SHQDDIDD 67 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ------EEPSGIVAENIQSRIRGNILM 392 A A A G K+ + + + + S LQ E I N+++R+R + L Sbjct: 68 GLAVAIACGIKHTTVNLDNEHENVLSKAINALQKLELYDENKLRISDANLRARLRMSTLY 127 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++N+ ++++ T N +E+ GY T YGD P+ L K +V+Q + Sbjct: 128 TIANNVNSLVVGTDNAAELHTGYFTKYGDGGVDILPIAGLTKREVYQWGEY--------- 178 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIK 494 LG +P S+L + PSA L QTD++ + Y ++DD ++ Sbjct: 179 LG-----VPQSVLNREPSAGLWEGQTDEKEMGTTYEMIDDFLE 216 >gi|229580710|ref|YP_002839110.1| NAD synthetase [Sulfolobus islandicus Y.G.57.14] gi|228011426|gb|ACP47188.1| NAD+ synthetase [Sulfolobus islandicus Y.G.57.14] Length = 304 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 37/313 (11%) Query: 253 QWNYMSDDSASTMYIPLQEE----------EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +W Y + ++ + I + E EA N V +R+Y++ +N +IG+SGG Sbjct: 10 RWYYTLNICSTNILIMVMHEYIRKSLTIDCEAVTNYIVERIREYLEFSNKKGGVIGVSGG 69 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC--KYDVLPIHDLVN 360 DSA+ A + A +N +++P T LED+ K L KY ++ I ++V+ Sbjct: 70 ADSAVTATLLAKA--TDNFFILLMPSSSTPKIDLEDSFEMIKFLNAQNKYKLINIDEIVS 127 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + E + V NI++R+R IL A + +++ T +KSE+ +GY T YG Sbjct: 128 LFSNKI-----ETNNKYVIGNIKARVRMIILYAYAQMLDYLVVGTGDKSELLLGYFTKYG 182 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D P+ DLYKTQV L G GL P I+ K S L QT + Sbjct: 183 DGGVDVLPIGDLYKTQVRML-------GKCLGL-------PERIVTKPSSPALWEGQTAE 228 Query: 481 ESLP-PYPILDDIIK-RIVE-NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 L Y +D I+ R E E I +T++ V+ L+ S++K R P + Sbjct: 229 GELGIDYETIDSILYLRFDEMRSEDEIVKMLGIPIDTIKKVDRLVKISQHK-RLPPEIFR 287 Query: 538 ITAKSFGRDRLYP 550 ++ ++ D +P Sbjct: 288 LSGRAINSDWRFP 300 >gi|167648869|ref|YP_001686532.1| NAD synthetase [Caulobacter sp. K31] gi|167351299|gb|ABZ74034.1| NAD+ synthetase [Caulobacter sp. K31] Length = 683 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 22/211 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + D A N EA+ G+ +++ EL ++GY +DL+ + + Sbjct: 15 VRVATAVPKVRLADPATNAQSVLALVREAHDAGVAVLVLPELGLTGYTIDDLLQQDVLLD 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +AID L + D VVG P +D + N+ V + G + V K LPNY EF+ Sbjct: 75 AVETAIDALAQASKDLAPLFVVGAPLRDGGRLYNTAVAIQGGRVRGVIPKSFLPNYREFY 134 Query: 125 EKRTFISG----------------YSNDPIVFRDI-----RLGILICEDIWKNSNICKHL 163 E+R F G + D ++ R++ +G+ ICED+W + Sbjct: 135 ERRWFTPGAGVVGRTLTLAGQAVPFGTD-VLLRNVGEAAFTVGVEICEDVWTPAPPSTAQ 193 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQ 194 GAE L +L+AS K + R + Q Sbjct: 194 AMAGAEILLNLSASNITIGKSETRRLLCASQ 224 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 16/227 (7%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALGK--ENVQTIMLPYKY 330 YN V L V+ ++IG+SGG+DS + AA A+D LG+ ++ LP Sbjct: 347 YNIQVQGLARRVEATGSKSLVIGVSGGLDSTHALIVAAKAMDQLGRPRSDILAYTLPGFA 406 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS-LMSQFLQEEPS-GIVAENIQSRIRG 388 T+ ++ +A A KA+G + I + L F + EP + EN+Q+ +R Sbjct: 407 TTERTKSNAWALMKAIGVTAGEIDIRPAAQQMLADLGHPFAKGEPVYDVTFENVQAGLRT 466 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASW-RNS 446 + L L+NH + M++ T + SE+++G+ T GD +NP + KT + L + S Sbjct: 467 DYLFRLANHHQGMVVGTGDLSELALGWCTYGVGDQMSHYNPNSGVPKTLIQHLIRFVAAS 526 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES---LPPYPILD 490 + G L E IL S EL P + Q + + PY + D Sbjct: 527 DDVDQATGDLLE----DILATEISPELVPGKEAQATESFVGPYALQD 569 >gi|12045244|ref|NP_073055.1| NH(3)-dependent NAD+ synthetase, putative [Mycoplasma genitalium G37] gi|255660408|ref|ZP_05405817.1| NH(3)-dependent NAD+ synthetase, putative [Mycoplasma genitalium G37] gi|1346654|sp|P47623|NADE_MYCGE RecName: Full=Probable NH(3)-dependent NAD(+) synthetase gi|3844972|gb|AAC71610.1| NH(3)-dependent NAD+ synthetase, putative [Mycoplasma genitalium G37] gi|166078956|gb|ABY79574.1| NH(3)-dependent NAD+ synthetase, putative [synthetic Mycoplasma genitalium JCVI-1.0] Length = 248 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 22/215 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L DYV+K+ VI GLSGGIDSA+ AAIA + G EN +++ + + L+ A Sbjct: 15 LFDYVKKSKAKGVIFGLSGGIDSAVVAAIAKETFGFENHLALIM---HINNSKLDFQATS 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG--IVAENIQSRIRGNILMALSNHSKA 400 +++ + I + F+L+ + L +P + A NI++R+R L A + Sbjct: 72 ELVKKMQFNSINIE--LEESFNLLVKTLGIDPKKDFLTAGNIKARLRMITLYAYAQKHNF 129 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++L T N E ++GY T +GD + PL L K V++LA N I Sbjct: 130 LVLGTGNFVEYTLGYFTKWGDGACDIAPLAWLLKEDVYKLAKHFN--------------I 175 Query: 461 PPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 P ++ ++P+A L QTD+ + Y LD +K Sbjct: 176 PEIVITRAPTASLFEGQTDETEMGITYKELDQYLK 210 >gi|302392994|ref|YP_003828814.1| NAD+ synthetase [Acetohalobium arabaticum DSM 5501] gi|302205071|gb|ADL13749.1| NAD+ synthetase [Acetohalobium arabaticum DSM 5501] Length = 259 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 39/265 (14%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K + I+GLSGG+DS++ A + +A G +N ++LP + + E A A Sbjct: 14 VEKRGANGAILGLSGGVDSSVVAGLIKEAFG-DNTLGVLLPTDGSIDKDTEYAKLVADEF 72 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEP------------SGI---VAENIQSRIRGNIL 391 + + + ++ + F +S+ EE SG +N++ R+R L Sbjct: 73 NLETVTVNLGEVYDVFEGKLSEADVEEADVSHWPQTKLDASGTGNRAGDNMKPRLRMVSL 132 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 L+ +++ TSNKSE+ GY T GD + PL DL KT+V++LA Sbjct: 133 HYLAEKMNYVVMGTSNKSEVITGYYTNNGDNATDLRPLGDLLKTEVWELAR--------- 183 Query: 452 GLGPLTEV-IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE 509 EV +P I+E+ PSA LR + D++ + Y LD I K + ++++ + Sbjct: 184 ------EVGVPEEIIERPPSAGLREGEADEDEIGISYKKLDAIYKALKDDKDL-----SK 232 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPV 534 + E V+ V+ L+ ++ K + PV Sbjct: 233 FETEKVKRVQELVNAAKDK-EEVPV 256 >gi|308189600|ref|YP_003922531.1| NAD(+) synthase (glutamine-hydrolyzing) [Mycoplasma fermentans JER] gi|307624342|gb|ADN68647.1| NAD(+) synthase (glutamine-hydrolyzing) [Mycoplasma fermentans JER] Length = 264 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 31/236 (13%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 +++G+SGGIDSA+ A+A A GK NV +++P + L+D KA+ K+ + Sbjct: 45 IVLGISGGIDSAVVVALAKKAFGK-NVLGVVMPVD-SMQNDLKDIKELEKAVDLKFITI- 101 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 DL N + ++ Q L + + NI+ R+R +L AL+ + ++ T NK E +G Sbjct: 102 --DLKNTYDTI-KQALPSINNNLALSNIKPRLRMAVLYALAQENNYLVTGTGNKCETHIG 158 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T YGD PL L K++V +A +P SI+ K PSA L Sbjct: 159 YFTKYGDGGSDILPLSKLLKSEVKIIAKHLK--------------VPDSIINKKPSAGLW 204 Query: 475 PHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 Q D++ L Y LD ++++ + + E ++ + SE+KR Sbjct: 205 EGQNDEDELGFSYKDLD----------SYLMDSNAKISREVKNKIDKMYKNSEHKR 250 >gi|323702070|ref|ZP_08113738.1| NAD+ synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532952|gb|EGB22823.1| NAD+ synthetase [Desulfotomaculum nigrificans DSM 574] Length = 243 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 17/202 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++D + ++GLSGGIDSA+ AA+ A ENV +++P +++P+ +DA Sbjct: 13 IKDQITGAGAKGAVVGLSGGIDSAVVAALCKRAF-PENVLGVIMPC-FSNPEDAKDAKLV 70 Query: 343 AKALGCKYDVLPIHDLVNHFFS-LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A+ LG Y+ + ++D F Q + + NI+ R+R L + + + Sbjct: 71 AETLGVPYEEVVLNDPFAWFVRRFTGQDYDVRSNDMAIANIKPRLRMITLYYFAAKNNYL 130 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ T NK+E VGY T YGD P+ +L K+QV +LA LG +P Sbjct: 131 VVGTGNKAETVVGYFTKYGDGGVDILPIANLVKSQVRELA---------QELG-----VP 176 Query: 462 PSILEKSPSAELRPHQTDQESL 483 I++++PSA L D++ + Sbjct: 177 RQIIDRTPSAGLWHGHCDEKEM 198 >gi|238810142|dbj|BAH69932.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 270 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 31/236 (13%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 +++G+SGGIDSA+ A+A A GK NV +++P + L+D KA+ K+ + Sbjct: 51 IVLGISGGIDSAVVVALAKKAFGK-NVLGVIMPVD-SMQNDLKDIKELEKAVDLKFITI- 107 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 DL N + ++ Q L S + NI+ R+R ++ AL+ + ++ T NK E +G Sbjct: 108 --DLKNTYDTI-KQALPLINSNLALSNIKPRLRMAVIYALAQENNYLVAGTGNKCETHIG 164 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T YGD PL L K++V +A +P SI+ K PSA L Sbjct: 165 YFTKYGDGGSDILPLSKLLKSEVKIIAKHLK--------------VPDSIINKKPSAGLW 210 Query: 475 PHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 Q D++ L Y LD ++++ + + E ++ + SE+KR Sbjct: 211 EGQNDEDELGFSYKDLD----------SYLMDSNAKISQEVKNKIDKMYKNSEHKR 256 >gi|223557987|gb|ACM90993.1| NAD synthetase [uncultured bacterium URE4] Length = 245 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 21/221 (9%) Query: 277 NACVLSLRDYVQKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +ACV +RD+ ++N +IG+SGG DS++ A + V+ALG + V + +P Sbjct: 9 DACVQWIRDWFEENGPGCNAVIGISGGKDSSVVAGLCVEALGVDRVIGVTMPNGVQP--D 66 Query: 336 LEDAAACAKALGCK-YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 ++D+ LG K YDV I + + + + L E S N+ R+R L A+ Sbjct: 67 IDDSIRLINHLGIKRYDV-NIGAAYDALMAEVERKLGHEASAQTRINMAPRLRMTALYAV 125 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 S + + T N SE VGY T YGD +G F+PL L +V I LG Sbjct: 126 SQSNNGRVANTCNLSEDWVGYSTRYGDAAGDFSPLGGLTVQEVV---------AIGKELG 176 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +P ++EK+PS L +TD+++L Y +LD I+ Sbjct: 177 -----LPVDLVEKTPSDGL-CGKTDEDNLGFTYAVLDRYIR 211 >gi|212638551|ref|YP_002315071.1| NH3-dependent NAD+ synthetase [Anoxybacillus flavithermus WK1] gi|212560031|gb|ACJ33086.1| NH3-dependent NAD+ synthetase [Anoxybacillus flavithermus WK1] Length = 246 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 23/229 (10%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 E + LR+ VQ+ + I+G+SGGIDSA+ A + A ++ IM P K ++ Sbjct: 2 EQKIEKLITWLRERVQEAGMNGAIVGISGGIDSAVVAHLIKRAFPNNSLGLIM-PCK-SN 59 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE------EPSGIVAENIQSRI 386 P+ EDA ++ G Y V+ + + F + + L+E + + + N ++R+ Sbjct: 60 PKDKEDALKVVQSCGIDYHVIDLTETHRVLFGEIEKQLKEKGQWNEQAARLGDANTRARL 119 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R L A++N+ +++ T N +E GY T YGD PL K +V ++A Sbjct: 120 RMTTLYAVANNYGYLVVGTDNAAEWHTGYFTKYGDGGVDLVPLVHFTKGEVREMARI--- 176 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIK 494 LG +P I+ K+PSA L QTD+ + Y ++D +K Sbjct: 177 ------LG-----VPEEIITKAPSAGLWEGQTDENEMGTTYDMIDKYLK 214 >gi|157953295|ref|YP_001498186.1| hypothetical protein AR158_C104R [Paramecium bursaria Chlorella virus AR158] gi|156067943|gb|ABU43650.1| hypothetical protein AR158_C104R [Paramecium bursaria Chlorella virus AR158] Length = 299 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 20/256 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ IA Q D+ GNI +A R A G +I+ ELF Y + + + K Sbjct: 1 MTRKVTIATLQFE-CTKDVMGNIERAERMIRNAAANGAQVIVLQELFEMMYICQ-IQYPK 58 Query: 61 SFIQA----CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 F A S + + + G I + F +D NSV + DA G+I+ V K Sbjct: 59 FFKHAEPVNKSGTVHMFSNLAKELGVVIPIPFFEKDGNNYYNSVAVADADGSIVGVYRKT 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLF- 172 ++P SE +E++ + + +N VF ++G+LIC D W S K L QGA+F+ Sbjct: 119 HIPQ-SECYEEKFYFTPSNNPYRVFETKFGKMGVLICWDQW-FSEAAKCLALQGADFIVY 176 Query: 173 --SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG----GQDELIFDGASFCFD 224 ++ P + + H +TG + +P+I N++G G E+ F G SF D Sbjct: 177 PTAIGTEPEFPDGETYLHWARTITGHAAATGVPVIVANRIGHEELGGSEIDFYGGSFIAD 236 Query: 225 GQQQLAFQMKHFSEQN 240 G + Q+ ++N Sbjct: 237 GTGAVVTQVGGVPQEN 252 >gi|21674314|ref|NP_662379.1| carbon-nitrogen hydrolase family protein [Chlorobium tepidum TLS] gi|21647488|gb|AAM72721.1| carbon-nitrogen hydrolase family protein [Chlorobium tepidum TLS] Length = 286 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 76/252 (30%), Positives = 112/252 (44%), Gaps = 18/252 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 MLK K+ I Q + + + N+ + +A E A R G D I F EL ++GY +D + Sbjct: 1 MLKS-KLRIVQADCTLANFEENLERHIKAIETAIRDGADAIAFPELSLTGYNVQDAA-QD 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVV---GFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + +D L+ + D I + G D GV NS + + G +V KI L Sbjct: 59 MAMHIDDRRLDALRELSRD----ICIFCGGIELSDDYGVYNSAFMFEDGAGRSVHRKIYL 114 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P Y F E R F +G + + R I ++G+ ICED W S + L QGA+ L L + Sbjct: 115 PTYGMFEELRYFSAGRQIETVTSRRIGKVGVAICEDFWHMS-VPYLLAHQGAKLLLVLMS 173 Query: 177 SPYYHNKLKKRHEIVT-----GQISHVHLP--IIYVNQVGGQDELIFDGASFCFDGQQQL 229 SP + + IVT S L + VN+VG +D + G S + Sbjct: 174 SPLRLSPGQGVPAIVTQWQTIASTSAFLLSCYVACVNRVGNEDSFTYWGNSAVTTPDGSI 233 Query: 230 AFQMKHFSEQNF 241 A FSE +F Sbjct: 234 AASAPMFSEHSF 245 >gi|319776752|ref|YP_004136403.1| nh(3)-dependent nad(+) synthetase [Mycoplasma fermentans M64] gi|318037827|gb|ADV34026.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma fermentans M64] Length = 264 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 31/236 (13%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 +++G+SGGIDSA+ A+A A GK NV +++P + L+D KA+ K+ + Sbjct: 45 IVLGISGGIDSAVVVALAKKAFGK-NVLGVIMPVD-SMQNDLKDIKELEKAVDLKFITI- 101 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 DL N + ++ Q L S + NI+ R+R ++ AL+ + ++ T NK E +G Sbjct: 102 --DLKNTYDTI-KQALPLINSNLALSNIKPRLRMAVIYALAQENNYLVAGTGNKCETHIG 158 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T YGD PL L K++V +A +P SI+ K PSA L Sbjct: 159 YFTKYGDGGSDILPLSKLLKSEVKIIAKHLK--------------VPDSIINKKPSAGLW 204 Query: 475 PHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 Q D++ L Y LD ++++ + + E ++ + SE+KR Sbjct: 205 EGQNDEDELGFSYKDLD----------SYLMDSNAKISQEVKNKIDKMYKNSEHKR 250 >gi|320161407|ref|YP_004174631.1| NH(3)-dependent NAD(+) synthetase [Anaerolinea thermophila UNI-1] gi|319995260|dbj|BAJ64031.1| NH(3)-dependent NAD(+) synthetase [Anaerolinea thermophila UNI-1] Length = 323 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 72/281 (25%) Query: 270 QEEEADYNACVLSLRDYVQKNNFHKV-----IIGLSGGIDSALCAAIAVDALGKENVQTI 324 Q E D V + ++++ H++ ++G+SGGIDS++ A+AV A G + V I Sbjct: 8 QALELDAQQEVERITRFLREEVLHRLRKQGAVVGISGGIDSSVVLALAVHAFGAQRVVGI 67 Query: 325 MLPYKYTSPQS----------------LEDAAACAKALGC--KYD--------------- 351 +LP K +SP+S ED ++ + GC + D Sbjct: 68 LLPEKESSPESAELAHLLAEQYGVQTVTEDISSALEGFGCYRRRDEAVRRVFPEFEPSWK 127 Query: 352 ---VLPIHDLVNHFFSLMSQF--------------LQEEPSGIVAENIQSRIRGNILMAL 394 VLP + L ++ S LQE + A N + R R +L Sbjct: 128 SKIVLPGNLLEEDRLNIFSLTVIKPDGTELNRRLPLQEYAQIVAASNFKQRTRMAMLYYH 187 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + ++ T NK+E +G+ YGD NP+ LYKTQV+QLA + Sbjct: 188 AELRNYAVIGTPNKNEHDLGFFVKYGDGGADVNPIAHLYKTQVYQLARYLE--------- 238 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESL---PPYPILDDI 492 IP +I E++P+ + P + QE P+ +LD I Sbjct: 239 -----IPKAIQERTPTTDTYPAGSTQEEFFYRIPFHLLDLI 274 >gi|240047715|ref|YP_002961103.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma conjunctivae HRC/581] gi|239985287|emb|CAT05300.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma conjunctivae] Length = 242 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 37/268 (13%) Query: 269 LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 +++EE + ++ V+K N VI GLSGGIDSAL + A ++ IM P Sbjct: 1 MKKEEKYIEYLISWIKKQVEKANKKGVIFGLSGGIDSALVGVLGQKAFPYNHLGVIM-PI 59 Query: 329 K--YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 + Q +E A D+LP + + +L S+ + NIQ R+ Sbjct: 60 RDMEADKQDIEKLANKFNIKTIVVDLLPTFTSIKNTLNLNSR--------LSIANIQPRL 111 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R L AL+ ++L T N E+ +GY T YGD P+ +L KTQV+++A Sbjct: 112 RMTTLYALAQEYNYLVLGTDNLVEMYIGYFTKYGDGGVDLLPIVNLTKTQVYKVA----- 166 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFIN 505 +G + E IL K+PSA L +Q D++ + Y D F+ Sbjct: 167 ----KHIGVVDE-----ILTKAPSAGLWENQKDEDEMGFSYKDFD-----------IFLK 206 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 N ++ + + + +E+L SE+KR + P Sbjct: 207 NPEKLSAKKRQRIEYLHKISEHKRSRIP 234 >gi|310640237|ref|YP_003944995.1| nh(3)-dependent nad(+) synthetase [Paenibacillus polymyxa SC2] gi|309245187|gb|ADO54754.1| NH(3)-dependent NAD(+) synthetase [Paenibacillus polymyxa SC2] Length = 269 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 34/227 (14%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQ---TIML 326 EA+ V L+ YV K ++I +SGGIDSA+ AA+ A D L +E Q T+ + Sbjct: 20 EAEVRKRVDFLKSYVTKTGSKGLLIAISGGIDSAVAAALCKQATDELTQEQGQEYKTLGV 79 Query: 327 PYKYTSPQSLEDAAACAKALGCKY----------DVLPIHDLVNHFFSLMSQFLQEEPSG 376 Y + +E + A AKA KY D + + V H +L L+ + Sbjct: 80 FQPYGQQEDIEHSYAVAKAFNLKYAGETNIKEAVDTIAVE--VEH--TLKDIGLERSITP 135 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 V N+++R R + AL+N +++ T + SE G+ T +GD + PL L K Q Sbjct: 136 QVRGNVKARTRMVVQYALANELNLLVVGTDHASEAITGFYTKWGDGAVDITPLSTLNKRQ 195 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 V LAS+ LG +P +IL+K+P+A L QTD++ L Sbjct: 196 VRLLASY---------LG-----VPQAILDKAPTAGLWEGQTDEKEL 228 >gi|313888212|ref|ZP_07821886.1| NAD+ synthase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845902|gb|EFR33289.1| NAD+ synthase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 238 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 32/252 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 + DY ++ + GLSGGIDSA+ AA+A +N +++P + + EDA Sbjct: 14 VEDYAKEVGAKGFVFGLSGGIDSAVVAALAKRVF-PDNSLGLIMPCD-SIDKDREDALKV 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+AL + + DL + F LM + + + NI+ R+R L + ++ Sbjct: 72 AEALDLETKTI---DLTSTFEELMKASFTSD-NRMARSNIKPRLRMTTLYYYAQDLGYLV 127 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L SN SE +GY T YGD P+ ++ KT +F++A LG +P Sbjct: 128 LGPSNASEWYLGYSTKYGDSGADIMPIANILKTDIFKVA---------RELG-----LPD 173 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHL 521 ++ K PSA L QTD++ + Y +LD ++I ++ E ++ + Sbjct: 174 FVINKKPSAGLWAGQTDEDEMGFTYEVLD-----------AYIRGEKTPEPEIKEKIDRM 222 Query: 522 LYGSEYKRRQAP 533 SE+KR AP Sbjct: 223 HKNSEHKRVMAP 234 >gi|312144464|ref|YP_003995910.1| NAD+ synthetase [Halanaerobium sp. 'sapolanicus'] gi|311905115|gb|ADQ15556.1| NAD+ synthetase [Halanaerobium sp. 'sapolanicus'] Length = 250 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 40/258 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+D V + ++GLSGGIDSA+ A +A A G +N I++P ++ + EDA Sbjct: 18 LKDKVVSAGANGAVVGLSGGIDSAVTARLAQKAFG-DNAMGIIMPCN-SNREDREDALLF 75 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI----VAE-NIQSRIRGNILMALSNH 397 A Y + + D+ H + + SGI +AE NI+ R+R L + Sbjct: 76 ANKFALNYIITDLSDVYQHLLDELKR------SGIKGNKMAEVNIKPRLRMTSLYYYAAS 129 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 +++ T N+SE+ +GY T YGD PL L K +V LA Sbjct: 130 LNYLVIGTDNRSELKIGYFTKYGDGGVDLAPLGSLVKHEVKVLARELK------------ 177 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVR 516 IP I+ K PSA L +QTD++ + Y LD I E T Sbjct: 178 --IPEKIINKKPSAGLWSNQTDEDEMGFSYQELDHYIL------------SGEAEKATKE 223 Query: 517 YVEHLLYGSEYKRRQAPV 534 +E L+ +E+K + P+ Sbjct: 224 KIERLVQKNEHKLKAVPI 241 >gi|169831525|ref|YP_001717507.1| NAD+ synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169638369|gb|ACA59875.1| NAD+ synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 241 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 28/206 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+D V ++ GLSGG+DSA+ AA+A A ++ IM P ++ PQ EDA Sbjct: 12 LKDKVADAGAQGLVFGLSGGVDSAVVAALAKRAFPDSSLGVIM-PC-FSRPQDAEDARLI 69 Query: 343 AKALGCKYDVLPIHDLV--NHFFSLMSQFLQE--EPSG---IVAENIQSRIRGNILMALS 395 A+ L LP +V F L+++ E PS + NI+ R+R L + Sbjct: 70 AEHLN-----LPTKTVVLDRVFADLLTELCGENYSPSNERDLTVANIKPRLRMTTLYFYA 124 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 ++ ++ T N+SEI +G+ T YGD PL +L K +V+++A + N Sbjct: 125 ARNRYLVAGTGNRSEIMIGFFTKYGDGGADLLPLANLLKVEVWEMARYLN---------- 174 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQE 481 +P I+ ++PSA L D++ Sbjct: 175 ----LPERIITRAPSAGLWHDHVDED 196 >gi|222098986|ref|YP_002533554.1| NH(3)-dependent NAD(+) synthetase [Thermotoga neapolitana DSM 4359] gi|254766723|sp|B9KAZ2|NADE_THENN RecName: Full=NH(3)-dependent NAD(+) synthetase gi|221571376|gb|ACM22188.1| NH(3)-dependent NAD(+) synthetase [Thermotoga neapolitana DSM 4359] Length = 290 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 54/287 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ +++ N+ ++G+SGG+DSA+ ++ V ALGK+ V ++LP + +S SL+DA Sbjct: 18 IREKIEEYNYRGAVVGVSGGVDSAVVLSLCVQALGKDRVFALILPERDSSKDSLKDAVDL 77 Query: 343 AKALGCKY---DVLPIHDLVN-------HFF---SLMSQF-------LQEEP-------- 374 + LG +Y + PI + FF S++ ++ L ++P Sbjct: 78 CETLGVEYRKRSITPILRKIGAYRLFPPRFFLPNSIVKRYVLNRWNTLSKDPFLDDLRNT 137 Query: 375 ------SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 G+ I+ RIR +L + ++ T+N++E G +GD + P Sbjct: 138 GPEEFLKGLAYYRIKHRIRMCLLYFEAEKRGYAVVGTTNRTEYLTGLYVKWGDEAVDIEP 197 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYP 487 + LYKTQVF+LA N +P IL+K PS +L P TD+ + Y Sbjct: 198 IMHLYKTQVFELAKEMN--------------VPEKILKKPPSPDLIPGITDEMAFNMSYL 243 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 LD I+ ++ +NE+ + + + V V+ +L SE RR P+ Sbjct: 244 ELDRILMKLEKNEDL-----SDEDPKKVERVKKILEFSEKYRRDIPI 285 >gi|291166973|gb|EFE29019.1| NAD+ synthetase [Filifactor alocis ATCC 35896] Length = 249 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 33/257 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ V +++ +I+G+SGGIDSA+ A + +N +++P K +S + +E A Sbjct: 17 LREQVVQSHTRGLILGISGGIDSAV-AGFLIKMACPDNSLGVIMPIK-SSEKDMEHAKEL 74 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQ----EEPSGIVAENIQSRIRGNILMALSNHS 398 + + L + + S + + +Q E+ + I N ++R+R L ++N+ Sbjct: 75 VEKADLTHMTLDLTQAHSLMLSTVKETMQDAWREDFARISDANTRARLRMTGLYTIANNL 134 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +++ T N +EI GY T YGD P+ L K++V++ A + LG Sbjct: 135 GYLVVGTDNAAEIYTGYFTKYGDGGVDVLPIAHLKKSEVYEWAEY---------LG---- 181 Query: 459 VIPPSILEKSPSAELRPHQTDQ-ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRY 517 +P SIL+K+PSA+L QTD+ E Y +D +F++ QE ++ Sbjct: 182 -VPQSILDKAPSADLWEGQTDEIEMGTTYRCID-----------AFLDG-QEVPEKDREV 228 Query: 518 VEHLLYGSEYKRRQAPV 534 +E L SE+KR A V Sbjct: 229 IERLHRNSEHKRHTATV 245 >gi|293363779|ref|ZP_06610520.1| NAD+ synthetase [Mycoplasma alligatoris A21JP2] gi|292552645|gb|EFF41414.1| NAD+ synthetase [Mycoplasma alligatoris A21JP2] Length = 265 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 26/257 (10%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 N V ++D V+ N + ++G+SGGIDS L AA+A ALG +N +++P S L Sbjct: 24 NYLVNFIKDKVKSANLNGAVVGISGGIDSTLVAALAKKALG-QNFIGVIMPINDMS-HDL 81 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 E K L + + + + +L + + NI R+R L A++ Sbjct: 82 EHIKKLEKNLEMNFISVNLQET-----NLAINKAINVKNSLAIANIMPRLRMTTLYAIAQ 136 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++L T NK E +GY T YGD P+ L K +V LAS N Sbjct: 137 ENNSLVLGTDNKDEFFIGYFTKYGDGGVDILPICHLTKQEVRFLASLLN----------- 185 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETV 515 +P ILEK PSA L +Q+D+ L Y LD + I ++ I + + T+ Sbjct: 186 ---VPNEILEKKPSAGLWENQSDEAELGFSYKDLDFYLDHI--EDQKLIK--KTLSSTTI 238 Query: 516 RYVEHLLYGSEYKRRQA 532 +E + S++KR A Sbjct: 239 SKIEKMHKISQHKRDGA 255 >gi|311031504|ref|ZP_07709594.1| NAD+ synthetase [Bacillus sp. m3-13] Length = 246 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 31/252 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+ + + I+G+SGGIDSA+ A + A ++++ IM P K + P+ E A Sbjct: 12 IQEKVKDSGLNGAIVGVSGGIDSAVVAHLIKRAFPEDSLGVIM-PCK-SDPKDEEYALEV 69 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQE------EPSGIVAENIQSRIRGNILMALSN 396 ++ G + + + + FS M + L+E E S + N ++R+R L A++N Sbjct: 70 IESCGISHTTIDLSETHTVLFSAMEKQLKEKGEWNEETSRLGDANTRARLRMTTLYAVAN 129 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++ T N +E GY T YGD PL + K +V ++A LG Sbjct: 130 NYGYLVVGTDNAAEWHTGYFTKYGDGGVDLVPLVNFTKGEVREMA---------KVLG-- 178 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESFINNDQEYNDETV 515 +P SI+ K PSA L QTD+ + Y ++D +K E D++ D Sbjct: 179 ---VPDSIINKPPSAGLWEGQTDENEMGTTYNMIDSYLK-----SEEIPEQDKQIIDRMH 230 Query: 516 RYVEH---LLYG 524 + EH L YG Sbjct: 231 KRTEHKRQLAYG 242 >gi|157952420|ref|YP_001497312.1| hypothetical protein NY2A_B116R [Paramecium bursaria Chlorella virus NY2A] gi|155122647|gb|ABT14515.1| hypothetical protein NY2A_B116R [Paramecium bursaria Chlorella virus NY2A] Length = 298 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 22/257 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M +K+ IA Q DI GNI +A A G +I+ ELF + Y P+ Sbjct: 1 MTRKVTIATTQF-ACTHDIYGNIERAEMLVRNAAANGAQVIILQELFATKYFCQTQSPQ- 58 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDK 114 FK + S ++ + G I + F +D NSV + DA G+I+ V K Sbjct: 59 -YFKLADPADDSVIVEIFSKLAKELGVVIPIPFFEKDGNNYYNSVAVADADGSIVGVYRK 117 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLF 172 ++P S+ +E++ + + SN VF +LG+LIC D W S K L +GA+F+ Sbjct: 118 THIPQ-SKCYEEKFYFTPSSNPYEVFETKYGKLGVLICWDQW-FSEAAKCLALEGADFIV 175 Query: 173 ---SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG----GQDELIFDGASFCF 223 ++ + P + N H +TG + +P+I N++G G+ ++ F G SF Sbjct: 176 YPTAIGSEPEFPNGESYLHWARTITGHAAATGVPVIVANRIGRERFGKTKIDFFGGSFIA 235 Query: 224 DGQQQLAFQMKHFSEQN 240 DG + Q+ ++N Sbjct: 236 DGTGAVVTQVGGVPQKN 252 >gi|114566961|ref|YP_754115.1| NAD+ synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318036|sp|Q0AX10|NADE_SYNWW RecName: Full=NH(3)-dependent NAD(+) synthetase gi|114337896|gb|ABI68744.1| NH(3)-dependent NAD(+) synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 249 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 130/260 (50%), Gaps = 43/260 (16%) Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 R V++ +++G+SGG+DSA+ A IA A EN T++LP + + D+ A Sbjct: 15 RQKVKEAGALGIVLGVSGGVDSAVAAIIAKKAF-PENCMTLLLPCESDVVDRM-DSQALV 72 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQF---LQEE--PSGIVAENIQSRIRGNILMALSNHS 398 + Y ++ DL N + L +QF L+ E ++ NI+SR+R +MAL + Sbjct: 73 EKFNIPYRII---DLDNAYHLLSTQFESYLKCEGLKGKLLRGNIKSRLR---MMALYYSA 126 Query: 399 KA---MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 +A ++L TSNKSE+ VGY T YGD L DL K +V++LA + LG Sbjct: 127 QARNYLVLGTSNKSELCVGYSTKYGDAGVDLQLLGDLLKREVYELAQF---------LG- 176 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDET 514 +P +I+ K PS L QTD+ + Y LD+ + + + E Sbjct: 177 ----VPETIVNKPPSGGLWSGQTDEGEMGLTYEELDNYLA------------SGDGSPEV 220 Query: 515 VRYVEHLLYGSEYKRRQAPV 534 + +E ++ GS++KR+ PV Sbjct: 221 INKIEGMMAGSQHKRKMPPV 240 >gi|58039581|ref|YP_191545.1| NAD synthetase [Gluconobacter oxydans 621H] gi|58001995|gb|AAW60889.1| Glutamine-dependent NAD(+) synthetase [Gluconobacter oxydans 621H] Length = 678 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 19/208 (9%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +IA L + D N + + +RQG+ ++F EL ++GY +DL F+ ++ Sbjct: 14 RIAACTLPVTLADPLKNGERVLGVLHDCDRQGVAAVVFPELGLTGYTLDDLRFQDVVLEG 73 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ + + + D + VVG P + N ++ G ++ V K +LP Y EF+E Sbjct: 74 AVEALRQVVAGSRDLLSVAVVGLPLVRGGLLYNCAAVVHRGRVLGVVPKSHLPRYREFYE 133 Query: 126 KRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKKQ 166 R F SG + R + LG+ ICED+W S L + Sbjct: 134 PRHFTSGLQTSGTIRLFGEDVPFGADLLFQAEDMRGLTLGVEICEDLWVASPPSGKLAEA 193 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQ 194 GA + + +ASP + R + Q Sbjct: 194 GATVILNPSASPVTIGRTDDRSLLCQAQ 221 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 23/237 (9%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQ 334 V +LR +Q + + +IG+SGG+DS L +AV D LG + +V +P T + Sbjct: 342 VSALRRRLQASGAQRAVIGVSGGLDSTLALLVAVRAADELGWPRTHVLAYTMPGFATGTE 401 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-FLQEEP-SGIVAENIQSRIRGNILM 392 S A A +ALG + + L I + + F + +P I EN+Q+ +R + L Sbjct: 402 SRSLAHALMEALGVEVNELDIRPTAQTMLAGIGHPFAEGQPVHDITFENVQAGLRTDFLF 461 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++N+ +++ T + SE+++G+ T GD +N + KT + + W Sbjct: 462 RIANYRNGIVIGTGDLSELALGWCTYGVGDQMSHYNVNAGMPKTLIQHVIRWLARD---- 517 Query: 452 GLGPLTEVIPPSILEKSPSAELRPH---------QTDQESLPPYPILDDIIKRIVEN 499 G L + + ++LE+ +AE+ P Q+ ++++ PYP+ D + I+ + Sbjct: 518 --GKLGDGVVGAVLERIVNAEITPELVPDTGQGVQSTEQTIGPYPLQDFTLYHILRH 572 >gi|261404710|ref|YP_003240951.1| NAD+ synthetase [Paenibacillus sp. Y412MC10] gi|329929510|ref|ZP_08283244.1| NAD+ synthase [Paenibacillus sp. HGF5] gi|261281173|gb|ACX63144.1| NAD+ synthetase [Paenibacillus sp. Y412MC10] gi|328936398|gb|EGG32845.1| NAD+ synthase [Paenibacillus sp. HGF5] Length = 269 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 26/213 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKEN---VQTIMLPYKYTSPQSL 336 L++YV+ + ++I +SGGIDSA+ A + A D L +EN +T+ + Y + Sbjct: 30 LKNYVKNSGTSGLLIAISGGIDSAVAAGLCKRATDELTEENGKEYKTLGVFQPYGEQADI 89 Query: 337 EDAAACAKALGCKYDV-LPIHDLVNHF-----FSLMSQFLQEEPSGIVAENIQSRIRGNI 390 D+ A AKA KY V I + VN L + + + S N+++R+R + Sbjct: 90 SDSYATAKAFDLKYTVETNIEEAVNEVALEVEHGLKNIGVHQHMSIPGKGNVKARVRMVV 149 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 AL+ +++ T + SE G+ T +GD + PL L K QV LAS+ Sbjct: 150 QYALAFEQNLIVVGTDHASEAITGFYTKWGDGAVDITPLSSLNKRQVRMLASY------- 202 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 LG +P SIL+K+PSA L QTD++ L Sbjct: 203 --LG-----VPQSILDKAPSAGLWEGQTDEKEL 228 >gi|251780691|ref|ZP_04823611.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085006|gb|EES50896.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 632 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 18/220 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A VGDI NI+ + ++A I+F EL I+ Y DL + + Sbjct: 4 IKVASACPKTKVGDIDYNISNILKCIDDAKNNNSKFIIFPELCITSYTCGDLFLNDTLLN 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + I+ + + T D I +G P + N +L G I+ + K +PNYSEF+ Sbjct: 64 KSITGINQILNATEDCDMLIALGAPLLINSVLYNCAYLLFKGKILGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F G S N P ++F G+ ICED+W +L Sbjct: 124 EKRWFTEGLSLETQEIDLPIQKNVPFGTNLIFSSQIANFGVEICEDLWVTIPPSSYLSLL 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 GA + +L+AS +K R +V+ Q + IY + Sbjct: 184 GAHIIGNLSASNELVSKKDYRKNLVSNQSARCLCSYIYAS 223 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 26/272 (9%) Query: 294 KVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K +IG+SGG+DS L + V L K N+ TI +P T+ ++ +A K L C Sbjct: 349 KAVIGISGGLDSTLALLVVVKTFELLNLDKHNIVTITMPGFGTTDRTYNNALTLCKELNC 408 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I D F + + + EN+Q+R R ILM L+N + +L+ T + Sbjct: 409 DLREINIVDASLQHFKDIGH--DKNIHDVTYENVQARERTQILMDLANKEQGLLIGTGDL 466 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW-----RNSHGITSGLGPLTEVIPPS 463 SE+++G+ T GD ++ + KT V L + NS + + L + P Sbjct: 467 SELALGWCTYNGDHMSMYSVNPSIPKTLVRYLVRYVAEKESNSEVSKTLVDILDTPVSPE 526 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES-----FINND---QEYNDETV 515 +L K + E+ Q ++ + PY + D + ++N S F+ + +Y+DE + Sbjct: 527 LLPKDANGEIT--QKTEDIVGPYELHDFFLYHFIKNGSSKDRILFLAKEAFKDDYSDEEI 584 Query: 516 -RYVEHLL---YGSEYKRRQAPVGTKITAKSF 543 +++ + + ++KR P G K+ + S Sbjct: 585 EKWLNKFMWRFFTQQFKRSALPDGPKVGSISL 616 >gi|150019994|ref|YP_001305348.1| NAD+ synthetase [Thermosipho melanesiensis BI429] gi|149792515|gb|ABR29963.1| NAD+ synthetase [Thermosipho melanesiensis BI429] Length = 279 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 49/252 (19%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L ++ +K NF ++G+SGG+DSA+ + V L KE ++ +LP + + +++ DA Sbjct: 9 LYEFFKKYNFSGAVLGVSGGVDSAVVLGLLVRVLDKEKIKCFILPERDSPKKAINDAKLV 68 Query: 343 AKALGCKYDVLPIHDLVNHF-------------FSLMSQFL------------------- 370 + Y+V + ++ F F + F Sbjct: 69 CRHFNVDYEVKNVTKIIRVFGVYRYYPPAFFVPFKIKESFAKKRWNRYKDNSFEYDVLGV 128 Query: 371 --QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 +E GI I+ R+R L + ++ T+NK+E G +GD S P Sbjct: 129 DDEEFLKGISYYRIKHRVRMVYLYKEAEKRNFAVVGTTNKTEFLTGLYVKWGDDSTDVEP 188 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYP 487 L LYKTQVF+LA + IP IL K S +L P D++ YP Sbjct: 189 LLHLYKTQVFELAKVLS--------------IPEKILNKPASPDLIPGLNDEDIFGLDYP 234 Query: 488 ILDDIIKRIVEN 499 LD I+K++ EN Sbjct: 235 TLDRILKKLEEN 246 >gi|257069936|ref|YP_003156191.1| NAD synthase [Brachybacterium faecium DSM 4810] gi|256560754|gb|ACU86601.1| NAD synthase [Brachybacterium faecium DSM 4810] Length = 846 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 24/244 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+ A L + D A N + + + Q + L +F EL ++GY +DLV ++S + Sbjct: 106 LRAAAITLPVALADPAANAERHLEVLGDLDAQQVGLAVFPELSLTGYSLDDLVLQESLLD 165 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A A+ T+ + + IVVG P + D+ + N + L G I+ + K NLP Y E Sbjct: 166 AAEQAVLTVLEASRELMPVIVVGAPLRATDRSRIFNCAITLHRGEILGIHPKQNLPTYRE 225 Query: 123 FHEKRTFISG---------YSNDP--------IVFRD---IRLGILICEDIWKNSNICKH 162 F+E+R F G ++P I D + L + ICED+W Sbjct: 226 FYERRWFAPGDDAHGVGVRLGSEPQHLTPHGLITVEDLPGLSLFVEICEDMWVPIPPSAE 285 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA + +L+ SP + + R + + +Y G+ +L +DG + Sbjct: 286 AALAGATVVANLSGSPITIGRAEDRKLMARSTSARTQAAYLYAAAGEGESTTDLAWDGQT 345 Query: 221 FCFD 224 F ++ Sbjct: 346 FVYE 349 Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 28/267 (10%) Query: 294 KVIIGLSGGIDSA---LCAAIAVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGC 348 + ++G+SGG+DS L A A+D LG++ + T +P T+ + +A + A+G Sbjct: 529 RPVLGVSGGLDSTHALLVCARAMDVLGRDRSEILTYTMPGFATTEHTRSNAELLSTAIGA 588 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 ++ L I M EE + EN+Q+ +R + L L+NH + +++ T Sbjct: 589 SFETLDIRPAATQMLKDMHHPFGDGEEVYDVTFENVQAGLRYDYLFRLANHHRGIVVGTG 648 Query: 407 NKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 + SE+++G+ T GD + + KT + L W G+ G + ++L Sbjct: 649 DLSELALGWCTYGVGDHMSHYGVNAGVPKTLIQHLIRWVIDEGL---FGDDATQVMQAVL 705 Query: 466 EKSPSAELRP------HQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 + S EL P Q+ ++S+ PY + D + ++ + Y Y+ Sbjct: 706 DTEISPELIPTREGEKAQSTEDSIGPYSLHDFFLYHLLR---------RGYGPAKTAYLA 756 Query: 520 HLLYGSEYKRRQAPVGTK-ITAKSFGR 545 H +G + + Q P G + +SF R Sbjct: 757 HQAWG-DVEAGQWPAGYRDADRRSFTR 782 >gi|189499808|ref|YP_001959278.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides BS1] gi|189495249|gb|ACE03797.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides BS1] Length = 287 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 13/228 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K+ + IAQ + V+ + N+ + E+A + +D+I F EL ++GY +D + Sbjct: 1 MKRSVLRIAQTDCVLANFEENLERHGTLIEDAIQDNVDVIAFPELSLTGYNVQDAA-QDI 59 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + A+D+L+ + I G D GV NS + + G + KI LP Y Sbjct: 60 ALHINDPALDSLR-ELSKKITIICGGIELSDDYGVYNSAFLFEDGLTQSAHRKIYLPTYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + I R + ++GI ICED+W S I L QGA+ LF L +SP Sbjct: 119 MFEELRYFSAGQKVEAINSRRLGKIGIAICEDLWHVS-IPYLLANQGAKLLFVLMSSPLR 177 Query: 181 HNKLKKRHEIVTGQISHV--------HLPIIYVNQVGGQDELIFDGAS 220 + + IVT Q H+ + +N+VG +D + G S Sbjct: 178 LTPGETQPAIVT-QWQHIISTYSFLFSTHVACINRVGNEDSFTYWGNS 224 >gi|300813651|ref|ZP_07093973.1| NAD+ synthase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512193|gb|EFK39371.1| NAD+ synthase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 242 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 23/221 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ Q+ + I GLSGGIDSA+ A +A EN +++P DA Sbjct: 17 LRERAQEAHAKGFIFGLSGGIDSAVVAGLAKRVF-PENSLGLIMPCDSIDDDK-NDALKI 74 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK+L + V+ DL N + L+ E + + NI+ R+R L ++ Sbjct: 75 AKSLDLEVKVV---DLTNTYNELLKASFTSE-NKLARSNIKPRLRMTTLYYYGQDLGYLV 130 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + SN SE VGY T YGD P+ ++ KT +F+LA + +P Sbjct: 131 VGPSNGSEWYVGYSTKYGDSGADIYPIANILKTDIFKLAKALD--------------LPD 176 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIK--RIVENE 500 I+EK PSA L Q+D+ + Y +LD I+ +I E E Sbjct: 177 FIIEKKPSAGLWKGQSDESEMGFTYEVLDSYIRGEKIPEEE 217 >gi|310658627|ref|YP_003936348.1| nh(3)-dependent nad(+) synthetase [Clostridium sticklandii DSM 519] gi|308825405|emb|CBH21443.1| NH(3)-dependent NAD(+) synthetase [Clostridium sticklandii] Length = 249 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 26/206 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ V ++ +++G+SGGIDSA+ A + A EN ++LP K ++PQ +E A Sbjct: 15 LREKVNESKSKGLVVGISGGIDSAVVAYLIKKAF-PENSLGVILPIK-SNPQDVEHANLL 72 Query: 343 AKALGCKYDVLPI-----HDLV-NHFFSLMS--QFLQEEPSGIVAENIQSRIRGNILMAL 394 C+ + + I H+L+ N + MS Q I N+++R+R + L + Sbjct: 73 VNK--CRIESMNINLTKTHELLFNEIKNTMSSDQLWNPTYQKISDANLRARLRMSTLYTI 130 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +N+ M++ T NK+E+ GY T YGD P+ +L K +V++ W G Sbjct: 131 ANNLGYMVVGTDNKAEVYTGYFTKYGDGGVDLLPIANLLKREVYE---WAKVLG------ 181 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQ 480 +P I+ K+PSA L QTD+ Sbjct: 182 -----VPNEIINKAPSAGLWDGQTDE 202 >gi|193083781|gb|ACF09464.1| NAD synthetase [uncultured marine crenarchaeote KM3-47-D6] Length = 261 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 24/251 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAA 341 L++ + + + VI GLSGGIDSA A + + V +++P S S DA Sbjct: 25 LKNQISQKKANGVIFGLSGGIDSATVAYLCGKISETKEVLALVMPDSAISLSSETGDALK 84 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 +G Y ++ I+ + + S +L EP + N+++RIR NI+ +N + Sbjct: 85 IIGEIGINYKLIDINTIHKRY----SNYL--EPGELALGNLRARIRSNIIYYYANLKNLL 138 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +L TS+KSE +GY T +GD S P+ LYKTQ+ +LA T +P Sbjct: 139 VLGTSDKSEYHIGYFTKFGDGSADILPIVSLYKTQLRKLAK--------------TIGVP 184 Query: 462 PSILEKSPSAEL-RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ--EYNDETVRYV 518 +I+ K S L + H ++E Y +D + +++ + S Q E + ++V + Sbjct: 185 NNIVTKKSSPNLWKGHDAEEEIGISYDEIDSALYCLIDKKLSVDETIQKTEISRKSVEKI 244 Query: 519 EHLLYGSEYKR 529 + +++KR Sbjct: 245 YQMYQNTQHKR 255 >gi|327310811|ref|YP_004337708.1| NAD+ synthetase [Thermoproteus uzoniensis 768-20] gi|326947290|gb|AEA12396.1| NAD+ synthetase [Thermoproteus uzoniensis 768-20] Length = 275 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L DY ++ ++G+SGG+DS A+A ALG + V ++LP +T Q +EDA A Sbjct: 24 LSDYFSQSRAKGAVVGVSGGVDSCTTLALAATALGPKRVTALVLPSGFTPRQDVEDAVAV 83 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AKA G K+ V+ I + + +L EE + N+ +RIR +IL +N ++ Sbjct: 84 AKAFGVKHYVVSIDQFLAPYAALP---FYEENDVVARGNLMARIRMSILYYYANRHNLLV 140 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 + T +KSE+ +GY T YGD P+ DLYKTQV ++A + Sbjct: 141 VGTGDKSELMLGYFTKYGDGGVDILPIGDLYKTQVREMARF 181 >gi|188590467|ref|YP_001920417.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum E3 str. Alaska E43] gi|188500748|gb|ACD53884.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 632 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 18/220 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A VGDI NI+ + ++A I+F EL ++ Y DL + + Sbjct: 4 IKVASACPKTKVGDIDYNISNILKCIDDAKNNNSKFIVFPELCVTSYTCGDLFLNDTLLN 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + I+ + + T D I +G P + N +L G I+ + K +PNYSEF+ Sbjct: 64 KSITGINQILNATEDCDMLITLGAPLLINSVLYNCAYLLFKGKILGIVPKSYIPNYSEFY 123 Query: 125 EKRTFISGYS------------NDP----IVFRD--IRLGILICEDIWKNSNICKHLKKQ 166 EKR F G S N P ++F G+ ICED+W +L Sbjct: 124 EKRWFTEGLSLETEEIDLPIQKNVPFGTNLIFSSQIANFGVEICEDLWVTIPPSSYLSLL 183 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 GA + +L+AS +K R +V+ Q + IY + Sbjct: 184 GAHIIGNLSASNELVSKKDYRKSLVSNQSARCLCSYIYAS 223 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 26/272 (9%) Query: 294 KVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K +IG+SGG+DS L + V L K N+ TI +P T+ ++ +A K L C Sbjct: 349 KAVIGISGGLDSTLALLVVVKTFELLNLDKHNIVTITMPGFGTTDRTYNNALTLCKELNC 408 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I D F + + + EN+Q+R R ILM L+N + +L+ T + Sbjct: 409 DLREINIVDASLQHFKDIGH--DKNIHDVTYENVQARERTQILMDLANKEQGLLIGTGDL 466 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW-----RNSHGITSGLGPLTEVIPPS 463 SE+++G+ T GD ++ + KT V L + N+ + + L + P Sbjct: 467 SELALGWCTYNGDHMSMYSVNPSIPKTLVRYLVRYVAEKESNAEVSDTLIDILDTPVSPE 526 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES-----FINNDQEYNDETVRYV 518 +L K + E+ Q ++ + PY + D + ++N S F+ + +D T + Sbjct: 527 LLPKDANGEIS--QKTEDIVGPYELHDFFLYHFIKNGSSKDRILFLAKEAFKDDYTDEEI 584 Query: 519 EHLL-------YGSEYKRRQAPVGTKITAKSF 543 E L + ++KR P G K+ + S Sbjct: 585 EKWLNKFMWRFFTQQFKRSALPDGPKVGSISL 616 >gi|307720708|ref|YP_003891848.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurimonas autotrophica DSM 16294] gi|306978801|gb|ADN08836.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurimonas autotrophica DSM 16294] Length = 240 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 14/220 (6%) Query: 33 ANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 A +Q DLI+F EL +SGY +D +F+ ++ + + L D IV+G +D Sbjct: 26 AVKQSSDLIVFPELSLSGYLLQDKLFEDAWSLEELTVFEELSKDID-----IVIGAALRD 80 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 E N + G I+ K++LPNY F E R F G + + + +L+CED Sbjct: 81 GEVFRNVGLYYANGKFISKHIKVHLPNYGMFEEARYFEGGNKFEAFTVNNKTIAMLVCED 140 Query: 153 IWKNSNICKHLKKQGAEFLFSLNASPY--YHNK----LKKRHEIVTGQISHVHLPIIYVN 206 +W S + K L + + L ASP +++K +K ++I+T + +++VN Sbjct: 141 LWHKS-VHKELMALNPDLIIVLVASPARGFNDKSLEIQEKWYKIITDVAKECNSQLLFVN 199 Query: 207 QVGGQDELIFDGASFCFDGQQQLAFQMKHFSE--QNFMTE 244 +VG +D L F G S D ++ ++ F + Q F E Sbjct: 200 RVGFEDGLGFWGGSCVVDIYGKITHKLPLFQKDIQTFTIE 239 >gi|126459407|ref|YP_001055685.1| NAD synthetase [Pyrobaculum calidifontis JCM 11548] gi|126249128|gb|ABO08219.1| NH(3)-dependent NAD(+) synthetase [Pyrobaculum calidifontis JCM 11548] Length = 276 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 3/155 (1%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V + V++GLSGGIDS + AA+AV ALG E V +++P +T + + DA A+ L Sbjct: 37 VGEAGARGVVVGLSGGIDSTVAAALAVKALGSERVLGLIMPSVFTPVEDVRDAEEVAERL 96 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G + + I +V F + ++++ + + N+ RIR IL +N ++L T Sbjct: 97 GIRMRKVDITPIVESFKRSIPDYVEDR---LASGNLLPRIRMTILYYYANRDNLLVLGTG 153 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++SE+ +GY T YGD P+ LYK QV ++A Sbjct: 154 DRSELLLGYFTKYGDGGVDLLPIGGLYKLQVREMA 188 >gi|291278882|ref|YP_003495717.1| hydrolase carbon-nitrogen family [Deferribacter desulfuricans SSM1] gi|290753584|dbj|BAI79961.1| hydrolase, carbon-nitrogen family [Deferribacter desulfuricans SSM1] Length = 277 Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 17/248 (6%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 KI +AQ++P +GDI N+ E+ D+I+F EL +SGY DLV + Sbjct: 3 KITLAQISPYLGDINKNLDLHIGLIEKGIESKADIIVFPELSLSGYFLRDLVVDAG-LSL 61 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEFH 124 S + +K + I++G +D++ +L NS + + + K+ LP+Y+ F Sbjct: 62 KSPILKKIKELSK--YISIIIGGVLEDEDYLLYNSAFYFEDEELKYIHRKVYLPDYTMFE 119 Query: 125 EKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP---Y 179 E R F +G N VF + R G+LICED + S+I +K Q E ++ ++ SP Sbjct: 120 EGRYFTAG--NRFTVFNTKHFRSGLLICEDALQVSSIYA-MKLQKVEIIYVISNSPARGL 176 Query: 180 YHNKLKKRHEIVTGQISHVHLP----IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 Y NK + T + ++ L +++VN+VG ++ + F G S F ++ ++ Sbjct: 177 YENKFYSKDFWYTA-LKYMALSCNAYVVFVNRVGVEEGVTFWGGSTIFSPMGEIITELPL 235 Query: 236 FSEQNFMT 243 F + M Sbjct: 236 FDNADVMV 243 >gi|253581404|ref|ZP_04858630.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fusobacterium varium ATCC 27725] gi|251836768|gb|EES65302.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fusobacterium varium ATCC 27725] Length = 276 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 29/251 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + I I Q+ PV+G+ N+ K + E+ G D+I+F EL ++GY ED VF+ Sbjct: 1 MNIRIEQMKPVLGNTEQNLLKMLESIEKGIEAGDDIIVFPELALNGYMLEDTVFE----T 56 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A D L + + I+ G + E N+ L+ G ++ K+ LP+Y F Sbjct: 57 AMKKIPDVLLEKSKE--ISIIFGMAEMGEDEYPYNTAYYLEDGKVVHKHRKVYLPDYGMF 114 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH--LKKQGAEFLFSLNASP--- 178 E R F +G + R+G+LICED W S H L + GA+++FS+ +P Sbjct: 115 FEGRYFGTGEKIRAFDTKFGRMGMLICEDAWHQS---AHYILSQDGAKYIFSIANAPARL 171 Query: 179 --------YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L K I G + I N+ G +D + F G S D ++ Sbjct: 172 GVNKSSVSATWKTLLKSSSISNGVFN------IMTNRAGVEDGVTFFGNSMVIDPCGEVV 225 Query: 231 FQMKHFSEQNF 241 + +F E Sbjct: 226 KEADYFKEDTL 236 >gi|71893821|ref|YP_279267.1| NH(3)-dependent NAD+ synthetase [Mycoplasma hyopneumoniae J] gi|71851948|gb|AAZ44556.1| NH(3)-dependent NAD+ synthetase [Mycoplasma hyopneumoniae J] Length = 246 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 117/263 (44%), Gaps = 41/263 (15%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +N + +R V+K VI GLSGG+DSAL A +A A ++ IM P + Sbjct: 11 FNYLIEWIRQEVKKAQKKGVIFGLSGGVDSALVAVLANKAFPDSHLGLIM-PIR-DMITD 68 Query: 336 LEDAAACAKALGCK---YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 + D K G K ++ P + + F+L ++ + NIQ R+R L Sbjct: 69 MVDIDLLVKKFGIKNKEINLKPAFENLKKCFNLKNK--------LANSNIQPRLRMTSLY 120 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A + ++L T N SE+ +GY T YGD P+ +L K QV+++A+ Sbjct: 121 AFAQEFDYLVLGTDNFSEMYLGYFTKYGDGGVDLLPIVNLTKVQVWKMAA---------- 170 Query: 453 LGPLTEV-IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 E+ IP SI++K PSA L +QTD+ + Y LD F+ N Sbjct: 171 -----EIGIPESIIKKKPSANLWENQTDENEMGFSYGDLD-----------LFMENPNLV 214 Query: 511 NDETVRYVEHLLYGSEYKRRQAP 533 + E + L S +KR Q P Sbjct: 215 SKEIAAKITKLHEISSHKRDQIP 237 >gi|54020213|ref|YP_115981.1| NH(3)-dependent NAD+ synthetase [Mycoplasma hyopneumoniae 232] gi|72080805|ref|YP_287863.1| NH(3)-dependent NAD+ synthetase [Mycoplasma hyopneumoniae 7448] gi|6651174|gb|AAF22217.1|AF140575_2 NH(3)-dependent NAD+ synthetase [Mycoplasma hyopneumoniae] gi|53987386|gb|AAV27587.1| NH(3)-dependent NAD+ synthetase [Mycoplasma hyopneumoniae 232] gi|71913929|gb|AAZ53840.1| NH(3)-dependent NAD+ synthetase [Mycoplasma hyopneumoniae 7448] gi|312601424|gb|ADQ90679.1| NH(3)-dependent NAD+ synthetase [Mycoplasma hyopneumoniae 168] Length = 246 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 117/263 (44%), Gaps = 41/263 (15%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 +N + +R V+K VI GLSGG+DSAL A +A A ++ IM P + Sbjct: 11 FNYLIEWIRQEVKKAQKKGVIFGLSGGVDSALVAVLANKAFPDSHLGLIM-PIR-DMITD 68 Query: 336 LEDAAACAKALGCK---YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 + D K G K ++ P + + F+L ++ + NIQ R+R L Sbjct: 69 MVDIDLLVKKFGIKNKEINLKPAFENLKKCFNLKNK--------LANSNIQPRLRMTSLY 120 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A + ++L T N SE+ +GY T YGD P+ +L K QV+++A+ Sbjct: 121 AFAQEFDYLVLGTDNFSEMYLGYFTKYGDGGVDLLPIVNLTKVQVWKMAA---------- 170 Query: 453 LGPLTEV-IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 E+ IP SI++K PSA L +QTD+ + Y LD F+ N Sbjct: 171 -----EIGIPESIIKKKPSANLWENQTDENEMGFSYGDLD-----------LFMENPNLV 214 Query: 511 NDETVRYVEHLLYGSEYKRRQAP 533 + E + L S +KR Q P Sbjct: 215 SKEIAAKITKLHEISSHKRDQIP 237 >gi|308067478|ref|YP_003869083.1| NH(3)-dependent NAD(+) synthetase [Paenibacillus polymyxa E681] gi|305856757|gb|ADM68545.1| NH(3)-dependent NAD(+) synthetase [Paenibacillus polymyxa E681] Length = 269 Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 30/225 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKEN---VQTIML 326 EA+ V L+ YV K ++I +SGGIDSA+ AA+ A D L +E +T+ + Sbjct: 20 EAEVRKRVDFLKSYVTKTGSKGLLIAISGGIDSAVAAALCKRATDELTQEQGDEYKTLGV 79 Query: 327 PYKYTSPQSLEDAAACAKALGCKYD--------VLPIHDLVNHFFSLMSQFLQEEPSGIV 378 Y + +E + A AKA KY V + V H +L + L+ + V Sbjct: 80 FQPYGQQEDIEHSYAVAKAFDLKYAGETNIKEAVDKVAVEVEH--TLKNIGLERSITPQV 137 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 N+++R R + AL+N +++ T + SE G+ T +GD + PL L K QV Sbjct: 138 RGNVKARTRMVVQYALANELNLLVVGTDHASEAITGFYTKWGDGAVDITPLSTLNKRQVR 197 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 LAS+ LG +P +IL+K+P+A L QTD++ L Sbjct: 198 LLASY---------LG-----VPQAILDKAPTAGLWEGQTDEKEL 228 >gi|257470809|ref|ZP_05634899.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fusobacterium ulcerans ATCC 49185] gi|317065013|ref|ZP_07929498.1| hydrolase [Fusobacterium ulcerans ATCC 49185] gi|313690689|gb|EFS27524.1| hydrolase [Fusobacterium ulcerans ATCC 49185] Length = 276 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 29/251 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + I I Q+ PV+G N+ K + E+ G D+I+F EL ++GY ED+VF+ + Sbjct: 1 MNIRIEQMKPVLGSTEQNLLKMVESIEKGIEAGDDIIVFPELALNGYMLEDIVFETAMRD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPR-QDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 ++ K + I+ G ++E N+ L+ +I K+ LP+Y F Sbjct: 61 VPEILLEKSKEIS------IIFGMAELGEEEYPYNTAYYLEDEKVIHKHRKVYLPDYGMF 114 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH--LKKQGAEFLFSLNASP--- 178 E R F +G + R+G+LICED W S H L + GA+++FS+ +P Sbjct: 115 SEGRYFAAGEKIRAFDTKFGRMGMLICEDAWHQS---AHYILAQDGAKYIFSIANAPAKL 171 Query: 179 --------YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L K I G + I N+ G +D + F G S D ++ Sbjct: 172 GVNKASVSATWKALLKSSSISNGVFN------IMTNRTGVEDGITFFGNSVVIDPTGEVV 225 Query: 231 FQMKHFSEQNF 241 + +F+E+ Sbjct: 226 KEAGYFNEETL 236 >gi|313904496|ref|ZP_07837872.1| NAD+ synthetase [Eubacterium cellulosolvens 6] gi|313470638|gb|EFR65964.1| NAD+ synthetase [Eubacterium cellulosolvens 6] Length = 263 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 37/250 (14%) Query: 269 LQEEEADYNACVLSLRDYVQKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L++ + + V +R Y ++N +IG+SGG DS++CAA+ +ALGKE V +++P Sbjct: 2 LKDAKKTKDQIVAWIRKYFEENGPGCAAVIGISGGKDSSVCAALCAEALGKERVIGVLMP 61 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS--------GIVA 379 S + D+ ++LG + + + F M++ + E GI A Sbjct: 62 NGVQS--DISDSRQLVESLGIPH----VEMNIGKAFDAMAEMVGENKELAAITGQQGISA 115 Query: 380 E---NIQSRIRGNILMALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 + N+ R+R L A+ A + T N SE VGY T YGD +G F+PL L Sbjct: 116 DTRINMPPRLRMTTLYAVGQMLPQGARVCNTCNMSEDYVGYSTKYGDAAGDFSPLAGLLA 175 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDII 493 +V Q+ + LG +P ++++K+PS L QTD++ L Y L + I Sbjct: 176 DEVLQVGAE---------LG-----LPENLVKKAPSDGLS-GQTDEDKLGFTYDALGEYI 220 Query: 494 KR-IVENEES 502 + I +EE+ Sbjct: 221 RTGICADEET 230 >gi|118381599|ref|XP_001023960.1| NAD synthase family protein [Tetrahymena thermophila] gi|89305727|gb|EAS03715.1| NAD synthase family protein [Tetrahymena thermophila SB210] Length = 704 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 133/600 (22%), Positives = 214/600 (35%), Gaps = 139/600 (23%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K+A LN D N ++ ++A QG + L EL ++GY ED + I Sbjct: 14 KVATCTLNQWAMDFEWNKNNIIKSIKQAKAQGCTIRLGPELEVTGYSCEDHFLETDTITH 73 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + G +G P + N VI+ I+ +R KI L + E Sbjct: 74 SWEVLAEILDSDITNGILCAIGMPVLHNNILFNCAVIVLNKQILLIRPKIYLAEGGNYRE 133 Query: 126 KRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWKNSNIC 160 R F + + N I D R+GI C+++W S + Sbjct: 134 PRFFTAWGINKEIETFELPMIIQQITKQKSVPFGNAIIQTLDTRIGIETCQELWMPSTLS 193 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGA 219 L G E +++ S Y NK K+R ++ +Y N G + + FDGA Sbjct: 194 SVLSLNGVEIFLNMSGSHYETNKQKRRLNMILEATIKTGAIYLYSNLRGCDGNRIYFDGA 253 Query: 220 SFCFDGQQQLAF--------------------------QMKHFSEQNFMTEW----HYDQ 249 S + L+ + K F EQ + H D Sbjct: 254 SIIAQNGKILSMTDMFALQDIDLVITQVDLDRVRSSRAENKSFGEQALEVKRYPVVHADI 313 Query: 250 QLSQWNYMSDDSASTMYIPLQEEEA-DYNACVLS------LRDYVQKNNFHKVIIGLSGG 302 ++Q + + ++Y L +EE Y LS L DY++++ + + LSGG Sbjct: 314 SIAQIPF-----SESVYKELSDEEVLQYIVHDLSYGPSCYLWDYLRRSGANGFFLPLSGG 368 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKY---------TSPQSLEDAAACAKALGC 348 DSA A I + +N ++I+ + T+P+ + LG Sbjct: 369 ADSASTALIVYNMCCVAFETMKNDESILQTLRQIVKDESFMPTNPKDICKRVLYTGYLGT 428 Query: 349 K---------------------YDV------LPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + Y+V D+ F +F + I +N Sbjct: 429 RNSSQETRDLAQLLSEEINSTHYNVNIEKVFKAFEDIAEETFGKRPEFNKSYAEDIALQN 488 Query: 382 IQSRIR--GNILMA-LSNHSKA-----MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 IQSR R + LM L+ +K ++L ++N E GY T Y S NP+ + Sbjct: 489 IQSRSRMITSFLMGQLAPWNKGLNGFLLVLGSANLDEGLRGYLTKYDCSSADINPIGSIS 548 Query: 434 KTQVFQLASW----RNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESL 483 KT V +L W RN IL+ P+AEL+P QTD++ + Sbjct: 549 KTDVRKLLQWNYEKRNIQA------------AKKILDLVPTAELKPLNGDKFAQTDEQDM 596 >gi|197294783|ref|YP_001799324.1| NAD(+) synthetase [Candidatus Phytoplasma australiense] gi|171854110|emb|CAM12097.1| NAD(+) synthetase [Candidatus Phytoplasma australiense] Length = 588 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 24/202 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI ++ N +G+ N + +E+ ILF EL +SGY DL F+ F++ Sbjct: 7 IKIQLSTPNLKIGNPQANAFSINKILQESKAL---FILFPELCLSGYTAGDLFFETFFLK 63 Query: 65 ACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A+D LK++T +G ++G P E + N V++ I+ + K +PNY EF Sbjct: 64 ENLKALDWLLKNNTFEGV--FILGMPLALHEVLFNVAVVIQKDKILGIIPKKTIPNYKEF 121 Query: 124 HEKRTFISGYSND--------------PIVF----RDIRLGILICEDIWKNSNICKHLKK 165 EKR F SG + D I+F DI G+ +C+D+W + + Sbjct: 122 MEKRWFQSGKTVDNQQITILGQEVPFGDILFVNSKHDIIFGVEVCQDLWTVFSPSDLMAL 181 Query: 166 QGAEFLFSLNASPYYHNKLKKR 187 GA +F+L++S + K+ R Sbjct: 182 NGAHLIFNLSSSTEHVGKINPR 203 >gi|322418213|ref|YP_004197436.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M18] gi|320124600|gb|ADW12160.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M18] Length = 283 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 12/222 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+ P +G + N+A A A E+ G +L++F EL ++GY +DLV + + ++ Sbjct: 5 VALAQIKPKLGCLDDNMALAEAAIEKGIAAGAELVVFPELALTGYFLKDLVPEVA-LRLD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 S I LK + I +GF + NS V L+ G I V K+ LP Y F E Sbjct: 64 SPQIAKLKKLSER--ISIAIGFVEVSSDFRFFNSAVYLEDGEIRHVHRKVYLPTYGLFDE 121 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH---- 181 +R G R R+G+LICED+W S L GA L L++SP Sbjct: 122 QRYMARGERFRAFDTRFGRIGMLICEDMWHLSAP-YILAMDGAMTLICLSSSPGRGVTES 180 Query: 182 ---NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 ++ T ++ + Y N+VG +D + F G S Sbjct: 181 EGLGSATAWQKLTTTTAMFLNCRVFYCNRVGYEDGINFWGGS 222 >gi|306820600|ref|ZP_07454229.1| NAD+ synthetase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551331|gb|EFM39293.1| NAD+ synthetase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 247 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 29/229 (12%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 VQ +N +++G+SGG+DSA+ A + A ++ I +P ++S SL+DA K Sbjct: 18 VQSSNSKGLLVGISGGVDSAVVANLIKLACPNSSLGVI-IPI-HSSGNSLDDANLLIKQ- 74 Query: 347 GCKYDVLPIHDLVNHFFSLMS--------QFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 C + + V H L + +E+ I N+++R+R + L +++N+ Sbjct: 75 -CNIQSVTVDLSVEHQMILNKSMDTIKGLKLFKEDYLKITDANLRARLRMSTLYSIANNL 133 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 M++ T N E GY T YGD + PLK + K V++ I LG Sbjct: 134 GYMVVGTDNADETYTGYFTKYGDGAVDLMPLKKILKKDVYE---------IGRVLG---- 180 Query: 459 VIPPSILEKSPSAELRPHQTDQESLP-PYPILDDII--KRIVENEESFI 504 +P SIL+K+PSA+L +QTD+ + Y ++ I +R+ +NEE I Sbjct: 181 -VPESILKKAPSADLWENQTDEAEMGVSYSSIEKYITGERVSDNEEKII 228 >gi|9631647|ref|NP_048426.1| hypothetical protein PBCV1_A78R [Paramecium bursaria Chlorella virus 1] gi|624085|gb|AAC96446.1| contains ATP/GTP-binding site motif A; similar to rat beta-alanine synthetase, corresponds to Swiss-Prot Accession Number Q03248 [Paramecium bursaria Chlorella virus 1] Length = 298 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 22/257 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M +K+ IA Q DI GNI +A A G +I+ ELF + Y P+ Sbjct: 1 MSRKVTIATTQF-ACTHDIFGNIERAEMLVRNAAANGAQVIVLQELFATKYFCQTQSPQ- 58 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDK 114 FK + S ++ + G I + F +D NSV + DA G+I+ V K Sbjct: 59 -YFKFADPADDSVIVEIFSKLAKELGVVIPIPFFEKDGNNYYNSVAVADADGSIVGVYRK 117 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLF 172 ++P S+ +E++ + + SN VF ++G+LIC D W S K L +GA+F+ Sbjct: 118 THIPQ-SKCYEEKFYFTPSSNPYEVFETKFGKMGVLICWDQW-FSEAAKCLALEGADFIV 175 Query: 173 ---SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG----GQDELIFDGASFCF 223 ++ + P + N H +TG + +P+I N+VG G+ ++ F G SF Sbjct: 176 YPTAIGSEPEFPNGESYLHWARTITGHAAATGVPVIVANRVGRERFGKTKIDFFGGSFIA 235 Query: 224 DGQQQLAFQMKHFSEQN 240 DG + Q+ ++N Sbjct: 236 DGTGAVVTQVGGVPQKN 252 >gi|225174317|ref|ZP_03728316.1| NAD+ synthetase [Dethiobacter alkaliphilus AHT 1] gi|225170102|gb|EEG78897.1| NAD+ synthetase [Dethiobacter alkaliphilus AHT 1] Length = 270 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 7/177 (3%) Query: 270 QEEEADYNACVLS-LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 QE+ D A +++ +++ +Q N K +IG+SGG DS++ AA+ V+ALG +NV +++P Sbjct: 5 QEKLNDITAKLINWIKNIMQINGGSKAVIGISGGKDSSVTAALCVEALGNKNVYGVLMPD 64 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF---LQEEPSGIVAENIQSR 385 + + A L + V+ I+ + FFS + L S N+ R Sbjct: 65 GIQ--KDIGYAYEICTHLDIPHAVMQINPVTEAFFSALEGLRGHLIPSVSDKTKINLPPR 122 Query: 386 IRGNILMALSNH-SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +R L A+S + +L TSN SE +GY TLYGD +G +PL L +V Q+ Sbjct: 123 VRMTALYAISQSIPGSRVLNTSNLSEDWIGYTTLYGDTAGALSPLAMLTSDEVIQVG 179 >gi|328948652|ref|YP_004365989.1| NAD+ synthetase [Treponema succinifaciens DSM 2489] gi|328448976|gb|AEB14692.1| NAD+ synthetase [Treponema succinifaciens DSM 2489] Length = 662 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 32/273 (11%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQ-----TIMLPYKYTSPQSLEDAAACAKALGCKY 350 +IGLSGG+DS L + A K N+ +I +P T+ ++ +A AK +G Sbjct: 363 VIGLSGGLDSTLALLVCARAFDKCNISREKIFSITMPAFGTTDRTFNNACLLAKEMGTTL 422 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I D V F + Q + + EN Q+R R +LM +N +++ T + SE Sbjct: 423 KEINIKDAVIQHFKDIGQDINTH--DVTYENCQARERTQVLMDFANKCNGIVIGTGDLSE 480 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI-----PPSIL 465 +++G+ T GD + + KT V L SW G L++V+ P Sbjct: 481 LALGWCTYNGDQMSMYGVNSSIPKTLVRHLVSWFADEAFEKGNKNLSDVLNDILATPVSP 540 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQE----- 509 E P +E + Q +E + PY + D + ++ +++F+ + + Sbjct: 541 ELLPPSEGKISQKTEEIVGPYELHDFFLYYVLRWGFSPRKIYFLAQKAFLGKEDKATKTI 600 Query: 510 YNDETV-RYVEHL---LYGSEYKRRQAPVGTKI 538 Y E + +++++ + ++KR P G K+ Sbjct: 601 YTKEIILKWLKNFYKRFFSQQFKRSCMPDGAKV 633 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 30/240 (12%) Query: 9 IAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A ++P V D N + ++A + + L++F EL I Y DL +K+ + C Sbjct: 8 VASVSPSLSVADCNFNSKQIIELVKKAQDKKIKLLVFPELSICAYTCADLFTQKTLQEEC 67 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + +T + VG P + N + G ++A+ K +PNYSEF+E Sbjct: 68 YIVLKNICEETKNCNILFCVGLPVELDSERFNCAAFVFKGKVLALIPKSFIPNYSEFYES 127 Query: 127 RTFIS-------------GYSNDP----IVFRD-----IRLGILICEDIWKNSNICKHLK 164 R F S G + P I +D I++ +CED+W + Sbjct: 128 RWFASFSENTVKQISLCKGLEDIPFGTDIFIQDENDSSIKISAELCEDLWVPFSPSTRHA 187 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGAS 220 GA + +L+AS K + R +VTG + IY N DE +IF G S Sbjct: 188 LNGATIIANLSASNEVAGKAEYRRILVTGHSAKTVSAYIYAN--ASHDESSTDMIFSGHS 245 >gi|212696809|ref|ZP_03304937.1| hypothetical protein ANHYDRO_01371 [Anaerococcus hydrogenalis DSM 7454] gi|212676099|gb|EEB35706.1| hypothetical protein ANHYDRO_01371 [Anaerococcus hydrogenalis DSM 7454] Length = 563 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 20/274 (7%) Query: 294 KVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 KVI+GLSGG+DS + V A L KEN+ +P TS ++ +A A+A G Sbjct: 272 KVILGLSGGLDSTMALLFIVKAFEKMNLPKENILLYTMPAFGTSKRTKSNAYKLAEAFGI 331 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 K + + I D VN + + I EN Q+R R IL N A+++ T +K Sbjct: 332 KLNEIVIKDAVNIHLKDIGH--DGKIQDIAYENAQARERTQILFDKGNMENALVIGTGDK 389 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI--PPSILE 466 SEIS G+ T GD + L KT++ + + L + + I P E Sbjct: 390 SEISQGFATYNGDHMSSYAVNASLTKTELRYIVGYLVEKTENEKLKEVLDDILKTPISPE 449 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENE--ESFINNDQ-----EYNDETVRYVE 519 +E + Q ++ + PY ++D +EN E Q +Y+ +T++ Sbjct: 450 LKNESEDKISQKTEDIIGPYELIDFFTYEFLENSSIEEIYQKAQAAFKDDYDSKTIKKWL 509 Query: 520 HLLY----GSEYKRRQAPVGTKITAKSFGRDRLY 549 Y S++KR + G ++ KSF R Y Sbjct: 510 KSFYKRLTSSQFKRSVSVDGPAMSEKSFSPRRGY 543 >gi|18312484|ref|NP_559151.1| NAD synthetase [Pyrobaculum aerophilum str. IM2] gi|25090775|sp|Q8ZXL4|NADE_PYRAE RecName: Full=NH(3)-dependent NAD(+) synthetase gi|18159945|gb|AAL63333.1| NH(3)-dependent NAD(+) synthetase [Pyrobaculum aerophilum str. IM2] Length = 267 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/160 (38%), Positives = 96/160 (60%), Gaps = 8/160 (5%) Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 YVQ+ V++G+SGG+DS + AA+AV+ALG++ V +++P YT P+ L+DA A Sbjct: 26 YVQRAGSRGVVVGISGGVDSTVAAALAVEALGRQRVLGLLMPSLYTPPEDLKDALDVINA 85 Query: 346 LGCKY---DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 LG ++ D+ PI+D F + F QE + + A NI RIR +L +N ++ Sbjct: 86 LGVEWKRVDITPIYD---AFVKTLPDFSQE--NRVAAGNILPRIRMTVLYYYANKYNLLV 140 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 + T ++SE+ +GY T YGD F P+ L+K QV +LA+ Sbjct: 141 MGTGDRSELLLGYFTKYGDGGVDFLPIGSLFKLQVRELAA 180 >gi|282881835|ref|ZP_06290488.1| NAD+ synthetase [Peptoniphilus lacrimalis 315-B] gi|281298327|gb|EFA90770.1| NAD+ synthetase [Peptoniphilus lacrimalis 315-B] Length = 239 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 23/221 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ ++ + I GLSGGIDSA+ A +A EN +++P DA Sbjct: 14 LRERAKEAHAKGFIFGLSGGIDSAVVAGLAKRVF-PENSLGLIMPCDSIDDDK-NDALKI 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK+L + V+ DL N + L+ E + + NI+ R+R L ++ Sbjct: 72 AKSLDLEVKVV---DLTNTYNELLKASFTSE-NKLARSNIKPRLRMTTLYYYGQDLGYLV 127 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + SN SE VGY T YGD P+ ++ KT +F+LA + +P Sbjct: 128 VGPSNGSEWYVGYSTKYGDSGADIYPIANILKTDIFKLAKALD--------------LPD 173 Query: 463 SILEKSPSAELRPHQTDQESLP-PYPILDDIIK--RIVENE 500 I+EK PSA L Q+D+ + Y +LD I+ +I E E Sbjct: 174 FIIEKKPSAGLWKGQSDESEMGFTYEVLDSYIRGEKIPEEE 214 >gi|225420508|ref|ZP_03762811.1| hypothetical protein CLOSTASPAR_06853 [Clostridium asparagiforme DSM 15981] gi|225040851|gb|EEG51097.1| hypothetical protein CLOSTASPAR_06853 [Clostridium asparagiforme DSM 15981] Length = 375 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 79/368 (21%), Positives = 141/368 (38%), Gaps = 73/368 (19%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + R EE +G L++F EL ++ Y DL +++ + Sbjct: 12 IRVAAATPKVRVADTVFNGEQVIRLMEEGYEKGAKLMVFPELCLTAYTCGDLFSQQTLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + T + VG P + + N + G ++ + K NLPNY EF+ Sbjct: 72 GALEALRQVIRATAGKDMLVFVGLPWERGGKLYNVAAAVKDGKLLGLVPKTNLPNYQEFY 131 Query: 125 EKRTFISG-----------------------YSNDPIVFRDIRLGILICEDIWKNSNICK 161 E R F G N P + +G +CED+W Sbjct: 132 EARHFCPGNEIPVEAAWEGGTVPMGANLLFSCKNAP----GLMIGAEVCEDVWVPCPPSI 187 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA + + +AS K R E++ GQ + + +Y N G+ +L+F G Sbjct: 188 RHCMAGATVMVNCSASDETTGKDAYRRELICGQAARLVCGYVYANAGEGESTQDLVFGGQ 247 Query: 220 SFCFDGQQQLAFQMKHF---------------SEQNFMTEW----------HYDQQLSQW 254 + + LA Q + F E+ MT + HY Q+ ++ Sbjct: 248 NLIAENGTCLA-QSRRFVNETIYADLDLERLTGERRRMTTFPAGEEIRRADHY--QVVEF 304 Query: 255 NYMSDDSASTM--------YIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVIIGL 299 ++ D + + ++P ++ C + L+ ++ + +IG+ Sbjct: 305 SFSEPDCSGALLRTVDPAPFVP-HDQGQRSRRCEEILSIQAMGLKKRLEHTSCSHAVIGI 363 Query: 300 SGGIDSAL 307 SGG+DS L Sbjct: 364 SGGLDSTL 371 >gi|257126527|ref|YP_003164641.1| NAD+ synthetase [Leptotrichia buccalis C-1013-b] gi|257050466|gb|ACV39650.1| NAD+ synthetase [Leptotrichia buccalis C-1013-b] Length = 245 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 21/216 (9%) Query: 283 LRDYVQKNNFH-KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 ++ Y ++N + K ++G+SGG DS++ AA+ V ALG+ENV +++P + ++ + Sbjct: 12 IKKYFEENGKNCKAVVGISGGTDSSVVAALCVAALGRENVIGVLMPK--GTQHDIDFSKK 69 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA--ENIQSRIRGNILMALSNHSK 399 + L K+ + + VN L+ + +P A N +RIR +L +S Sbjct: 70 LVEFLQIKHYEINVEKPVNDLKELIFSQIGVDPDEFDAYKTNQPARIRMAVLYGISAVIG 129 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 + T N SE VGY T +GD +G F+P+ D KT+V +L + LG Sbjct: 130 GRVANTCNLSEDYVGYSTKFGDAAGDFSPISDFTKTEVRKLGAE---------LG----- 175 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +P L+K P + ++D+E L Y +LD I+ Sbjct: 176 LPEMFLKKVPEDGMS-GKSDEEKLGFSYEVLDKYIR 210 >gi|217076428|ref|YP_002334144.1| NAD+ synthetase [Thermosipho africanus TCF52B] gi|217036281|gb|ACJ74803.1| NAD+ synthetase [Thermosipho africanus TCF52B] Length = 290 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 51/255 (20%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ V + NF +++G+SGG+DSA+ A+ V A ++ ++ +LP + + S++DA Sbjct: 12 LRETVAQYNFRGLVLGVSGGLDSAVVLALLVKAFDRDKIKCFILPERDSPKDSVKDAVFV 71 Query: 343 AKALGCKYDVLPIHDLVNHF----------------------------------FSLMSQ 368 K G +Y++ I ++ F + Sbjct: 72 CKYFGVEYEIKNITKILRALGIYKYYPPAFFVPWKVKENFAKKRWQKYKEKGNPFEFDIE 131 Query: 369 FLQEEP--SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 +++E GI + R+R L + ++ T+NK+E G +GD S Sbjct: 132 GIEDEEFLKGISYYRAKHRVRMVYLYKEAERRNYAVVGTTNKTEFLTGLYVKWGDDSTDI 191 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-P 485 P+ LYKTQV++LA N +P I+ K S +L P D+E Sbjct: 192 EPILHLYKTQVYELAKELN--------------VPEKIIMKPASPDLIPGIGDEEIFGLD 237 Query: 486 YPILDDIIKRIVENE 500 Y LD I+ +++ N+ Sbjct: 238 YSTLDRILDKLLNNK 252 >gi|295695621|ref|YP_003588859.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Bacillus tusciae DSM 2912] gi|295411223|gb|ADG05715.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Bacillus tusciae DSM 2912] Length = 290 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 15/251 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ + Q+ PV+GD+A N + E+A G DL++F EL ++GY +DL + + Sbjct: 3 FRVGLVQMRPVLGDVAENARRHVMWVEKAKGAGCDLVVFPELSLTGYWLKDLAVDCARMV 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 +++ H A IV G + L N+ + + G ++ K+ P Y F Sbjct: 63 EDREVRQVIQASRH---ADIVFGMVEMTKRYTLYNTALYVSGGEVVYRHHKVYPPTYGMF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY--- 180 E R F G R G++ICED W S + L + GA L +ASP Sbjct: 120 EENRYFGRGKRVRAFDAPGGRFGLMICEDAWHPS-VPYILTEDGAMVLIIPSASPARPAV 178 Query: 181 -----HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 + R Q+ V+ +++ N+VG +D + F G S D ++ Sbjct: 179 GERVGSQETWYRTLRTYAQLFGVY--VLFANRVGVEDGVAFYGGSAVVDPFGEIIAAAPE 236 Query: 236 FSEQNFMTEWH 246 F E + + H Sbjct: 237 FEETLLVVDVH 247 >gi|291518162|emb|CBK73383.1| NAD+ synthetase [Butyrivibrio fibrisolvens 16/4] Length = 249 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 18/202 (8%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + +IG+SGG DS++ AA+ +ALG + V I++P S L+DA LG +++ Sbjct: 29 RAVIGISGGKDSSVTAAVLKEALGADRVVGIIMPNGEMS--DLDDAKLLVDFLGIPNEIV 86 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS--KAMLLTTSNKSEI 411 PI D N + + + E + + N+ R+R + L A++ + ++ T N SE Sbjct: 87 PITDYYNAAIATFEKADKFEVTKDLKINLAPRLRMSTLYAVAQGQPVTSFVVNTCNASED 146 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 VGY T YGD +G + L+D T+V Q+ + LG +P ++ K+PS Sbjct: 147 YVGYSTKYGDAAGDVSLLQDFTVTEVLQIGEY---------LG-----LPQQLVHKTPSD 192 Query: 472 ELRPHQTDQESLPPYPILDDII 493 L + + Y LD+ I Sbjct: 193 GLSGMSDEDKLGFKYAQLDEYI 214 >gi|119716275|ref|YP_923240.1| NAD synthetase [Nocardioides sp. JS614] gi|119536936|gb|ABL81553.1| NAD+ synthetase [Nocardioides sp. JS614] Length = 681 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 25/248 (10%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V D A N + + +G+ + +F EL +SGY +DL + + A Sbjct: 13 RVAACTVPIRVADPATNARAVLEQAQACSDEGVAVAIFPELCLSGYALDDLFLQDVLLDA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + I L + + +VVG P VLN+ V++ G I+ V K LP Y EF+E Sbjct: 73 VADEIAGLVAASEGLLPVLVVGAPVAHGSRVLNAAVVIHRGRILGVAPKSYLPTYREFYE 132 Query: 126 KRTFISGYS--------------NDPIVF-----RDIRLGILICEDIWKNSNICKHLKKQ 166 +R F G ++F R + L + +CED+W Sbjct: 133 RRWFAPGDDVRGSMVLAGQEVPVGPDLLFEAEDVRGLVLHVEVCEDMWVPVPPSAEAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFC 222 GA L +++ SP + RH + S +Y GGQ E L +DG + Sbjct: 193 GATVLANISGSPITVGRASDRHLLARSASSRCLAAYLYA--AGGQGESTTDLSWDGQTMV 250 Query: 223 FDGQQQLA 230 ++ + LA Sbjct: 251 YEHGELLA 258 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 11/208 (5%) Query: 294 KVIIGLSGGIDSA---LCAAIAVDALGKENVQTI--MLPYKYTSPQSLEDAAACAKALGC 348 KV+IG+SGG+DS + AA A+D LG++ + + LP T + A A A +LG Sbjct: 364 KVVIGISGGLDSTHALIVAAKAMDRLGRDRSEILGFTLPGFATGEATKGYAWALADSLGI 423 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 + I D + + EE I EN+Q+ +R + L L+NH ++L T Sbjct: 424 TMQEIDITDAARAMLTDLDHPYAKGEEVYDITFENVQAGLRTDYLFRLANHRGGIVLGTG 483 Query: 407 NKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGI--TSGLGPLTEVIPPS 463 + SE+++G+ T GD +N + KT + L W S G S L +V+ Sbjct: 484 DLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISTGQFDESTNAVLLDVVGQE 543 Query: 464 IL-EKSPSAELRPHQTDQESLPPYPILD 490 I E P+ E Q+ +ES+ PY + D Sbjct: 544 ITPELIPTREDHLPQSTEESVGPYSLQD 571 >gi|194334395|ref|YP_002016255.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Prosthecochloris aestuarii DSM 271] gi|194312213|gb|ACF46608.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Prosthecochloris aestuarii DSM 271] Length = 291 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 4/178 (2%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +++ ++ I Q + V+ + N+A+ E A G+D I F EL ++GY +D + Sbjct: 6 MQRPRLRIVQSDCVLANFEENLARHVHHIENAIEGGLDAIAFPELSLTGYNVQDAA-QDI 64 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + A+D L+ + + I G D+ GV NS + G+ + KI LP Y Sbjct: 65 AMHIDDPALDPLR-ELSKKISIICGGIELSDEYGVYNSAFFFEDGHAQSAHRKIYLPTYG 123 Query: 122 EFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F E R F +G + + R + R+GI ICED W S + L QGA+ LF L +SP Sbjct: 124 MFEELRYFSAGQEIETVTSRRLGRIGIAICEDFWHVS-VPYLLAHQGAKLLFVLMSSP 180 >gi|299143856|ref|ZP_07036936.1| NAD+ synthetase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518341|gb|EFI42080.1| NAD+ synthetase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 246 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 20/204 (9%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL LR+ V+K +I G+SGGIDSA+ AA++ A ++ IM P + ++ + EDA Sbjct: 20 VLWLRENVEKAGAKGLIFGMSGGIDSAVIAAVSKLAFPDTSLGIIM-PCE-SAYEDEEDA 77 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A+ L K + + D + L S F + + NI+ R+R L + Sbjct: 78 RLIAEVLDLKIQKVDLTDTYKTY--LESSFFS--SNRMARSNIKPRLRMLTLYYYAQDLG 133 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++ +SN SE +GY T +GD PL K +VF LA LG Sbjct: 134 YLVCGSSNASEFYIGYYTKFGDSGADLLPLVGFLKDEVFDLA---------RELG----- 179 Query: 460 IPPSILEKSPSAELRPHQTDQESL 483 IP I++K PSA L +QTD++ + Sbjct: 180 IPEKIIDKKPSAGLWENQTDEDEM 203 >gi|138896163|ref|YP_001126616.1| NH(3)-dependent NAD(+) synthetase [Geobacillus thermodenitrificans NG80-2] gi|196250117|ref|ZP_03148811.1| NAD+ synthetase [Geobacillus sp. G11MC16] gi|134267676|gb|ABO67871.1| NH(3)-dependent NAD(+) synthetase [Geobacillus thermodenitrificans NG80-2] gi|196210301|gb|EDY05066.1| NAD+ synthetase [Geobacillus sp. G11MC16] Length = 246 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 23/219 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ V + ++G+SGGIDSA+ A + A +N +++P K + + +EDA Sbjct: 12 LREQVASAGLNGAVVGISGGIDSAVVAHLIKRAF-PDNSLGLIMPCK-SHAKDMEDALKV 69 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQ------EEPSGIVAENIQSRIRGNILMALSN 396 ++ G ++ V+ + ++ F + L+ EE + + N ++R+R L A++N Sbjct: 70 VESCGIQHLVIDLTEVHKSLFGAVEAELKAIGEWNEEKARLGDANTRARLRMTTLYAVAN 129 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++ T N +E GY T YGD PL K +V ++A LG Sbjct: 130 NYGYLVVGTDNAAEWHTGYFTKYGDGGVDLVPLIHFTKGEVREMARL---------LG-- 178 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIK 494 +P I+ K+PSA L QTD+ + Y ++D +K Sbjct: 179 ---VPEEIITKAPSAGLWEGQTDESEMGTTYDMIDKYLK 214 >gi|78224059|ref|YP_385806.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter metallireducens GS-15] gi|78195314|gb|ABB33081.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter metallireducens GS-15] Length = 295 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 101/245 (41%), Gaps = 12/245 (4%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+ P +G + N A E A DLI+F EL ++GY DLV + Sbjct: 17 VALAQIKPKLGCLTENCTLVESAIERAVADKADLIVFPELALTGYFLRDLVPDVALRLDA 76 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPR-QDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + H IVVGF D NS + +D G I + K+ LP Y F E Sbjct: 77 PEIARIRELSRH---VAIVVGFVEVSDDYRFFNSAIYVDGGEIRHIHRKVYLPTYGLFDE 133 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH---- 181 +R G R R+G+LICED+W S L GA L L++SP Sbjct: 134 QRYLARGERFRAFDTRFGRMGMLICEDMWHLSAP-YILAMDGATTLVCLSSSPGRGISED 192 Query: 182 ---NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 ++ + ++ + Y N+VG +D + F G S + + + F E Sbjct: 193 ESLGSTAAWQKLTSTTAMFLNSRVFYCNRVGYEDGVNFWGGSEVIAPSGSVVSRARLFDE 252 Query: 239 QNFMT 243 +T Sbjct: 253 DLLVT 257 >gi|325847109|ref|ZP_08169935.1| NAD+ synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481081|gb|EGC84126.1| NAD+ synthase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 603 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 20/274 (7%) Query: 294 KVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 KVI+GLSGG+DS + + A L KEN+ +P TS ++ +A A+A G Sbjct: 312 KVILGLSGGLDSTMALLFIIKAFEKMNLPKENILLYTMPAFGTSKRTKSNAYKLAEAFGI 371 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 K + + I D VN + + I EN Q+R R IL N A+++ T +K Sbjct: 372 KLNEIVIKDAVNIHLKDIGH--DGKIQDIAYENAQARERTQILFDKGNMENALVIGTGDK 429 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI--PPSILE 466 SEIS G+ T GD + L KT++ + + L + + I P E Sbjct: 430 SEISQGFATYNGDHMSSYVVNASLTKTELRYIVGYLVEKTENEKLKEVLDDILKTPISPE 489 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVEN---EESFINN----DQEYNDETVRYVE 519 +E + Q ++ + PY ++D +EN EE + +Y+ +T++ Sbjct: 490 LKNESEDKISQKTEDIIGPYELIDFFTYEFLENSSIEEIYQKAKAAFKDDYDSKTIKKWL 549 Query: 520 HLLY----GSEYKRRQAPVGTKITAKSFGRDRLY 549 Y S++KR + G ++ KSF R Y Sbjct: 550 KSFYKRLISSQFKRSVSVDGPDMSEKSFSPRRGY 583 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 4/129 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K LK+ VG+++ N + ++ ++AN ++++L EL ++G D Sbjct: 1 MKKNLKLRADNFKIKVGNVSYNREQIKKVVKKANEDLVNILLLPELCLTGASLYDGYKND 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + +C ++ LK + + VG P ++ +++ V +L G I K N + Sbjct: 61 DILSSCLDSLFDLKKFSENIDTLFSVGLPIKEGNKIIDMVFLLKEGEICGGFFKDNFKD- 119 Query: 121 SEFHEKRTF 129 HEK F Sbjct: 120 ---HEKYIF 125 >gi|289422705|ref|ZP_06424545.1| NAD+ synthetase [Peptostreptococcus anaerobius 653-L] gi|289156884|gb|EFD05509.1| NAD+ synthetase [Peptostreptococcus anaerobius 653-L] Length = 252 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 23/225 (10%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 N + +R+ V++ + VI+G+SGGIDSA+ A + A +++ I+ ++PQ Sbjct: 9 NKTIQWIRERVEQAHCKGVIVGISGGIDSAVVAYLIKKAFPNDSMGVIL--NIKSNPQDR 66 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE------EPSGIVAENIQSRIRGNI 390 DA G +Y L + + ++ L E E + N+++RIR + Sbjct: 67 VDAMKVIDGCGIEYLELVLDEPQGMILEMVKDKLDEKGLYRPETRKMSDANLRARIRMST 126 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 + ++N+ ++ T N +E+ GY T YGD F PL +L K +V++ W GI Sbjct: 127 IYTIANNMGYLVAGTDNAAELLTGYFTKYGDGGVDFLPLANLTKAEVYE---WAKELGIH 183 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIK 494 L + K+PSA L QTD+ + Y +D +I+ Sbjct: 184 DDL-----------ISKAPSAGLWDGQTDENEMGTTYKYIDMVIE 217 >gi|148265775|ref|YP_001232481.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter uraniireducens Rf4] gi|146399275|gb|ABQ27908.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter uraniireducens Rf4] Length = 283 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 12/222 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+ P +G +A N A A E LILF EL ++GY +DLV + + + Sbjct: 5 VALAQIKPKLGCLADNFALVEAAVERGIESQAGLILFPELALTGYFLKDLVPEVA-LSLY 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + I LK + I VGF + NS + L+ G I + K+ LP Y F E Sbjct: 64 APEIGRLKELSRR--ISIAVGFVEVSSDYRFFNSAIYLEDGEIKHLHRKVYLPTYGLFDE 121 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH---- 181 +R G R R+G+LICED+W S + GA L L++SP Sbjct: 122 QRYLARGERFRAFDTRYGRMGMLICEDMWHLSA-PYIMAMDGATTLLCLSSSPGRGISED 180 Query: 182 ---NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 K ++ + ++ ++Y N+VG +D + F G S Sbjct: 181 ESLGSTKAWQKLTSTTAMFLNSRVLYCNRVGYEDGVNFWGGS 222 >gi|238019954|ref|ZP_04600380.1| hypothetical protein VEIDISOL_01830 [Veillonella dispar ATCC 17748] gi|237863478|gb|EEP64768.1| hypothetical protein VEIDISOL_01830 [Veillonella dispar ATCC 17748] Length = 255 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 34/240 (14%) Query: 269 LQEEEADYNACVLSLRDYVQKNNFH-KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L +A A + +RDY +N ++G+SGG DS + AA+ +ALG E V +++P Sbjct: 2 LDNPQATKEALIQWIRDYFNQNGPSCSAVVGISGGKDSTIVAALCKEALGAERVVGVLMP 61 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV--------- 378 S ++DA LG + ++ I + +L + +Q E +V Sbjct: 62 NGIQS--DIDDAKTVVNHLGISHIIVNIG---AAYEALTNAIIQGEGYEVVTGRNDLSRD 116 Query: 379 -AENIQSRIRGNILMALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 A N R+R L A+ + + A + T N SE VGY T YGD +G F+PL +L Sbjct: 117 AAINTPPRLRMATLYAVGQNLPNGARVANTCNGSEDYVGYSTKYGDSAGDFSPLANLVVE 176 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +V Q+ + IP +++K+PS L Q+D++ L Y +LD I+ Sbjct: 177 EVRQIGRLLD--------------IPKYLVDKTPSDGLS-GQSDEDKLGFTYAVLDRYIR 221 >gi|158320808|ref|YP_001513315.1| NAD+ synthetase [Alkaliphilus oremlandii OhILAs] gi|189030323|sp|A8MHN7|NADE_ALKOO RecName: Full=NH(3)-dependent NAD(+) synthetase gi|158141007|gb|ABW19319.1| NAD+ synthetase [Alkaliphilus oremlandii OhILAs] Length = 250 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 39/227 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ V+ + +G+SGGIDSA+ A + A EN ++LP K +S + +E Sbjct: 16 LREQVRNAGAKGLTVGISGGIDSAVVACLIKKAF-PENSLGVILPIK-SSTKDVEHGILT 73 Query: 343 AKALGCKY---DVLPIHDLV-----------NHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 A+A G +Y D+ H+ V N F + M + + N+++R+R Sbjct: 74 AEACGIEYIEIDLGEEHNTVANKVVHQLNNKNLFNTGMERAMDS--------NLRARLRM 125 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + L A++N+ +++ T N +EI GY T YGD P+ L K +V++ W G Sbjct: 126 STLYAVANNLNYLVVGTDNAAEIYTGYFTKYGDGGVDILPIASLKKYEVYE---WAKVLG 182 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ-ESLPPYPILDDIIK 494 +P +LEK PSA L QTD+ E Y +D+ ++ Sbjct: 183 -----------VPKEVLEKEPSAGLWEGQTDEGEMGTSYKYIDEFLE 218 >gi|15643410|ref|NP_228454.1| NH(3)-dependent NAD(+) synthetase, putative [Thermotoga maritima MSB8] gi|8928237|sp|Q9WZB3|NADE1_THEMA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|4981167|gb|AAD35729.1|AE001738_9 NH(3)-dependent NAD(+) synthetase, putative [Thermotoga maritima MSB8] Length = 281 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 54/287 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ +++ N+ ++G+SGG+DSA+ ++ V ALGK+ V ++LP + +S SL+DA Sbjct: 9 IKEKIEEYNYRGAVVGVSGGVDSAVVLSLCVQALGKDRVFALILPERDSSKDSLKDAVDF 68 Query: 343 AKALGCKY---DVLPI-----------------HDLVNHFFSLMSQFLQEEP-------- 374 + LG +Y + PI +V + L ++P Sbjct: 69 CERLGVEYRKRSITPILRKIGVYRLFPPRLFLPDSIVKRYVLNRWNTLSKDPFLDDLRNT 128 Query: 375 ------SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 G+ I+ RIR +L + ++ T+N++E G +GD + P Sbjct: 129 GPEEFLKGLAYYRIKHRIRMCLLYFEAEKRGYAVVGTTNRTEYLTGLYVKWGDEAVDIEP 188 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYP 487 + LYKTQVF+LA N +P IL+K PS +L P TD+ + Y Sbjct: 189 IMHLYKTQVFELAKEMN--------------VPEKILKKPPSPDLIPGITDEMAFNMSYL 234 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 LD I+ ++ +NE+ + + + V V+ +L SE RR P+ Sbjct: 235 ELDRILMKLEKNEDL-----SDEDPKKVERVKKILELSEKYRRDIPI 276 >gi|312879702|ref|ZP_07739502.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Aminomonas paucivorans DSM 12260] gi|310782993|gb|EFQ23391.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Aminomonas paucivorans DSM 12260] Length = 286 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 24/247 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK----- 59 L A+ Q++P + D+ GN+ + + EEA R+G L +F E+ ++GY D+ Sbjct: 3 LTAALVQISPTLLDLGGNLLRHVQGLEEARRRGARLAVFPEMSLTGYRIGDVSLDASARS 62 Query: 60 ------KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 ++ +++ A++TL D VV +P + + ++ G + V Sbjct: 63 ALDRDLRTSLESLRKALETLDMDG-------VVSYPLFEGGRTFIAAEYVERGRTLGVHR 115 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK--NSNICKHLKKQGAEFL 171 K+NL NY + E RTF G + R G+L+CED+W N +C + Q A + Sbjct: 116 KVNLCNYGHYREDRTFTPGEDLTVLRPRWGAAGLLVCEDLWHPVNGILCTQMGAQ-ALLV 174 Query: 172 FSLNASPYYHN---KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 S ++P L + + Q ++ G + DG SF F + Sbjct: 175 PSAPSAPSREEIGANLARWRLLAGAQALAQTCYVLCCCGSGPEGAFHGDGGSFAFGPRGD 234 Query: 229 LAFQMKH 235 L ++ Sbjct: 235 LLLSLRE 241 >gi|21226714|ref|NP_632636.1| NAD synthetase [Methanosarcina mazei Go1] gi|20905002|gb|AAM30308.1| NH(3)-dependent NAD(+) synthetase [Methanosarcina mazei Go1] Length = 354 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 75/310 (24%), Positives = 125/310 (40%), Gaps = 72/310 (23%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RD V V++G+SGGIDSA+ + V GKENV ++LP K ++P S A Sbjct: 54 IRDQVTGFKKKGVVLGVSGGIDSAVALTLCVQEFGKENVYGLLLPEKESAPSSKTLGAEI 113 Query: 343 AKALGCKYDVLPIHDLVN-----------------------HFFSL-----MSQFLQEEP 374 ++LG +Y+ +PI ++ H SL ++Q L P Sbjct: 114 CESLGVQYEEVPISPIIEALGIYDKKEQIIKKTCPEYDPKIHKTSLVLPDFLNQGLLNVP 173 Query: 375 ----------------------SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I +N++ R R + + ++ T+NK+E+ Sbjct: 174 YIRLIKDGETISRYRLKANDYLELIGLQNVKQRSRMIVQYMYAEKLNYVVCGTTNKTELV 233 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +G YGD PL D YKTQ++ LA + + I+++ PSA+ Sbjct: 234 LGQFVKYGDGGVDLEPLADCYKTQIYALAKYLE--------------VNEEIIKRPPSAD 279 Query: 473 LRPHQTDQESL---PPYPILDDII-----KRIVENEESFINNDQEYNDETVRYVEHLLYG 524 H T E P I+D ++ K +E E + ++ R+++ + Sbjct: 280 TWSHYTSDEEFYWRMPIHIMDQLLYAQEHKLPLEVAERNTGLPGDIIEKAWRHIDRIRDT 339 Query: 525 SEYKRRQAPV 534 +EY R PV Sbjct: 340 TEYVRSAPPV 349 >gi|291286022|ref|YP_003502838.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Denitrovibrio acetiphilus DSM 12809] gi|290883182|gb|ADD66882.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Denitrovibrio acetiphilus DSM 12809] Length = 275 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 13/242 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ IAQ++PV+G++ N K + A G DL++F EL ++GY DLV++ + + Sbjct: 1 MKVHIAQISPVLGNVEKNAEKHFDIIKTAIGSGCDLVMFPELSLTGYYLLDLVYEVAMDE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEF 123 L+ + IV G+ + + NS + G + K+ LP+Y+ F Sbjct: 61 THPIYQKFLELSEN---IAIVFGYVEESADRRFYNSAAFVHRGRTVHTHRKVYLPDYTLF 117 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F +G S + + GILICED + S + L + G + + + SP N Sbjct: 118 EEGRYFAAGKSFEAFDTEFGKFGILICEDSFHMSALYI-LSQSGVQNILIPSNSPARGN- 175 Query: 184 LKKRHEIVT-GQISHVHLP------IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 L++ H+ Q S+ ++ +IY N+VG +D + F G S +D + + + F Sbjct: 176 LEEGHDAANIWQTSNEYVASVLTVNLIYANRVGVEDGVSFWGGSEAYDARGKKLKSLPMF 235 Query: 237 SE 238 E Sbjct: 236 KE 237 >gi|322383315|ref|ZP_08057115.1| NAD synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152435|gb|EFX45234.1| NAD synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 268 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 33/216 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKEN---VQTIMLPYKYTSPQSL 336 L++YV K+ + ++I +SGG+DSA+ + A D L KE +T+ + Y + + Sbjct: 30 LKEYVLKSGANGLLIAISGGVDSAVATGLCKRATDELSKEKGKEYKTVGVFQPYGVQEDI 89 Query: 337 EDAAACAKALGCKYDV-LPIHDLVNHFF--------SLMSQFLQEEPSGIVAENIQSRIR 387 ED+ A AKA G + + I + VN +++ + +E G NI++R R Sbjct: 90 EDSYATAKAFGLSHTIETNIEEAVNEIALEVEHGLKPYVNRHMSKEGKG----NIKARTR 145 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 + A++ +++ T + SE G+ T +GD + PL L K QV LA Sbjct: 146 MVVQYAIAFELNLLVVGTDHASEAVTGFYTKWGDGAVDITPLSSLNKRQVRMLARE---- 201 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 LG +P S+L+K+P+A L QTD++ L Sbjct: 202 -----LG-----VPSSVLDKAPTAGLWEGQTDEKEL 227 >gi|159041084|ref|YP_001540336.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldivirga maquilingensis IC-167] gi|157919919|gb|ABW01346.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldivirga maquilingensis IC-167] Length = 279 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 18/249 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARR-AREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L++ + Q +GD NI + R A+ G D+++ EL+I GY DL+ + + Sbjct: 2 LRVHLIQYASRLGDPEYNIDRLRNYAKANCRGDGNDVLITPELYIPGYMSRDLLLQIAEP 61 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYS 121 S I L +G I+ G +D++ V NS V + ++A+ K +LP+Y Sbjct: 62 LDGKS-IGELTEIAREGKCTIITGIAERDKDTGVVYNSAVAIGENGLMALYRKRHLPSYG 120 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS--- 177 F E R F G + P+ + G+ IC D + + + L +GA ++A+ Sbjct: 121 VFDESRYFGVGRGDAPVFSMNGTKAGLAICYDAFY-PEVSRSLMLKGARVQVYISAAPDM 179 Query: 178 --PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 P++ ++ R + +V +IYVN +G D L F G SF D ++ + K+ Sbjct: 180 SRPHFETFIRAR------AMENVSF-VIYVNTIGQYDGLGFFGGSFIVDPLGEVVAKAKY 232 Query: 236 FSEQNFMTE 244 + E + E Sbjct: 233 YEEDTVVAE 241 >gi|329766675|ref|ZP_08258218.1| NAD synthase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136930|gb|EGG41223.1| NAD synthase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 265 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 53/219 (24%) Query: 280 VLSLRDYVQ---KNNFHK--VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 V+S+ D+++ N F K V+IGLSGGIDS+L AA+ V A+G E V +++P K + P+ Sbjct: 17 VISICDFIKNEVSNKFQKNGVVIGLSGGIDSSLVAALCVKAIGSEKVLGLIMPEKESDPE 76 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHF----------------------FSLMSQFLQE 372 S A A K +++ I+ +++ F + L+ E Sbjct: 77 SQITAKKIADDYDIKTEIIDINSILDSFGVFKIKEKIVKEKFPDFNDDCKYRLVVPPKFE 136 Query: 373 EPSGI--------------------------VAENIQSRIRGNILMALSNHSKAMLLTTS 406 GI A +I+ R+R +L + ++ T+ Sbjct: 137 SVVGIPYLDILDDKNKQHKLKISSCEFLTLTAATSIKHRVRMTMLYYHGEKNNLAVVGTT 196 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 NKSE GY YGD P+ +LYK+QV+QL + N Sbjct: 197 NKSEYLQGYFVKYGDGGSDIEPIVNLYKSQVYQLGQFLN 235 >gi|332977887|gb|EGK14636.1| carbon-nitrogen family hydrolase [Desmospora sp. 8437] Length = 292 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 21/231 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY------PPEDLVF 58 +++ +AQL PV+G + N+ A+ + +DL++F EL ++GY P + Sbjct: 15 MRVGLAQLAPVLGGVEENLRLHEEMIRRADSEQVDLLVFPELSLTGYALGEGTPDAARMA 74 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINL 117 + A +S + K+D +V+GF + +E V NS L G I V K L Sbjct: 75 TDGDLLALASLAE--KTD-------VVLGFAEESEEHVFYNSAAYLSRGRIQLVHRKTYL 125 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 P Y F E R F G + R R+G++ICE+ W S + L ++G + L + Sbjct: 126 PTYGMFQEGRYFGRGSRIRGVDTRFGRVGVVICEEAWHPS-VPYLLAQEGVKILLVMANG 184 Query: 178 PYYHN--KLKKR--HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L + H I++ + ++VN+ G ++ + F G S FD Sbjct: 185 PVKEGGAELSREPWHRILSTHSMLHSVYTVFVNRAGVEEGVRFFGNSAVFD 235 >gi|15922484|ref|NP_378153.1| NAD synthetase [Sulfolobus tokodaii str. 7] gi|25090779|sp|Q96YL5|NADE_SULTO RecName: Full=NH(3)-dependent NAD(+) synthetase gi|15623274|dbj|BAB67262.1| 279aa long hypothetical NH(3)-dependent NAD(+) synthetase [Sulfolobus tokodaii str. 7] Length = 279 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 140/284 (49%), Gaps = 33/284 (11%) Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 DY V +R+Y++++ IIGLSGGIDS++ + A N +++P T Sbjct: 18 TDY--IVRRIREYIEESKKEGGIIGLSGGIDSSVTTILLSRATN--NFYILLMPTSSTPQ 73 Query: 334 QSLEDAAACAKALGC--KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 + +EDA K + KY + I +++N F S+++ IV NI++R+R +L Sbjct: 74 KDIEDAMKIIKIVNGENKYSYINIDEIINEFSSIVNI-----SDKIVIGNIKARVRMTLL 128 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A + +++ T +KSEI +GY T YGD P+ DLYKTQV L ++ Sbjct: 129 YAFAQKMNYLVIGTGDKSEIMLGYFTKYGDGGVDVLPIGDLYKTQVRMLGNY-------- 180 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDII----KRIVENEESFINN 506 LG +P I++K PS L QT + + Y +D I+ + + E EE Sbjct: 181 -LG-----VPEEIVKKPPSPALWEGQTAEGEIGLDYETIDSILYLKFEEMREPEEIAEMT 234 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 Y D+ ++ + +++ S++K R P +++ ++ D YP Sbjct: 235 KTSY-DKVIKII-NMVKTSQHK-RLPPEIFRLSGRAINSDWRYP 275 >gi|253702074|ref|YP_003023263.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M21] gi|251776924|gb|ACT19505.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M21] Length = 283 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 12/222 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+ P +G + N+A A E+ G DLI+F EL ++GY +DLV + + ++ Sbjct: 5 VALAQIKPKLGCLDDNLALVEAAIEKGIAAGADLIVFPELALTGYFLKDLVPEVA-LRLD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + I+ LK T I +G + NS + L+ G I V K+ LP Y F E Sbjct: 64 APQIERLK--TLSKRISIAIGLVEVSSDFRFFNSALYLEEGEIRHVHRKVYLPTYGLFDE 121 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH---- 181 +R G R R+G+LICED+W S L GA L L++SP Sbjct: 122 QRYMARGERFRAFDTRFGRVGMLICEDMWHLSA-PYVLAMDGAMTLLCLSSSPGRGVSGT 180 Query: 182 ---NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 ++ + ++ + Y N+VG +D + F G S Sbjct: 181 EGLGSAAAWQKLTSTTAMFLNCRVFYCNRVGYEDGINFWGGS 222 >gi|222054593|ref|YP_002536955.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. FRC-32] gi|221563882|gb|ACM19854.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. FRC-32] Length = 283 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 12/222 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+ P +G + N A A + DLILF EL ++GY +DLV + + + Sbjct: 5 VALAQIKPKLGCVTDNCAVVEAAVARGIDEKADLILFPELALTGYFLKDLVPEVA-LAVG 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 S I L+ + G VGF + NS V L+AG I + K+ LP Y F E Sbjct: 64 SPEICRLRELSRKISIG--VGFVEVTADYRFFNSAVYLEAGEIKHLHRKVYLPTYGLFDE 121 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP----YYH 181 +R G R R+G+LICED+W S L GA L L++SP Sbjct: 122 QRYMARGEQFRAFDTRFGRMGMLICEDMWHLSAP-YILAMDGATTLLCLSSSPGRGITEE 180 Query: 182 NKLKKR---HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 KL ++ + ++ ++Y N+ G +D + F G S Sbjct: 181 EKLGSTIAWQKLTSTTAMFLNSRVLYCNRAGYEDGVNFWGGS 222 >gi|145220125|ref|YP_001130834.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Prosthecochloris vibrioformis DSM 265] gi|145206289|gb|ABP37332.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 286 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 11/227 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K K+ IAQ + + + N+ + R EEA R G D I F EL +SGY +D + Sbjct: 1 MRKAKLHIAQTDCTLANFDDNLERHCRMTEEAIRNGADAIAFPELSLSGYNVQDAA-QDI 59 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + L+ + I G ++ GV NS + + G ++ KI LP Y Sbjct: 60 AMHIHDPKLQPLRELSRHICI-ICGGIELSEEYGVYNSAFMFEEGEAQSIHRKIYLPTYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + + + R+G+ ICED W S + L QGA+ + L +SP Sbjct: 119 MFEELRYFSAGQEIRTVDSKRLGRIGVAICEDFWHVS-VPYLLAHQGAQLMLVLMSSPLR 177 Query: 181 HN------KLKKRHEIVTGQISHVHLPII-YVNQVGGQDELIFDGAS 220 + + ++ + + S + + VN+VG +D + G S Sbjct: 178 MSPGNGAPAIVEQWQTIASTYSFLFSSFVGCVNRVGNEDSFTYWGNS 224 >gi|197119784|ref|YP_002140211.1| nitrilase/amidohydrolase superfamily protein [Geobacter bemidjiensis Bem] gi|197089144|gb|ACH40415.1| nitrilase/amidohydrolase superfamily protein, class 8 [Geobacter bemidjiensis Bem] Length = 283 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 12/222 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+ P +G + N+A A E+ G DLI+F EL ++GY +DLV + + ++ Sbjct: 5 VALAQIKPKLGCLDDNLALVEAAIEKGIAAGADLIVFPELALTGYFLKDLVPEVA-LRLD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + I+ LK T I +G + NS + L+ G I V K+ LP Y F E Sbjct: 64 APQIEKLK--TLSKRISIAIGLVEVSSDFRFFNSALYLEEGEIRHVHRKVYLPTYGLFDE 121 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH---- 181 +R G R R+G+LICED+W S L GA L L++SP Sbjct: 122 QRYMARGERFRAFDTRFGRVGMLICEDMWHLSA-PYVLAMDGAMTLLCLSSSPGRGVSGT 180 Query: 182 ---NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 ++ ++ + Y N+VG +D + F G S Sbjct: 181 EGLGSAAAWQKLTATTAMFLNCRVFYCNRVGYEDGINFWGGS 222 >gi|188586416|ref|YP_001917961.1| NAD+ synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351103|gb|ACB85373.1| NAD+ synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 250 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 20/202 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++ V++ + GLSGGIDSA+ AA++ ++ + IM P Y+ P+ EDA Sbjct: 20 IKQQVEEAGCKGTVTGLSGGIDSAVVAALSKRVFPEDTLGVIM-PC-YSEPRDEEDALLF 77 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 A+ L DL + S++ + E + +A NI+ R+R +L + K + Sbjct: 78 AEHHNINVKNL---DLSETYDSMVGKLDDTESTSKMALANIKPRLRMTVLYYYAQTYKYL 134 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +L TSNKSE+ +GY T YGD + P+ K +V+ LA IP Sbjct: 135 VLGTSNKSELILGYFTKYGDGAADLLPIATFTKMEVYALARQLE--------------IP 180 Query: 462 PSILEKSPSAELRPHQTDQESL 483 ++++ P+A + QTD++ + Sbjct: 181 ERLIKRPPTAGIISGQTDEDEM 202 >gi|313678798|ref|YP_004056538.1| NAD+ synthetase [Mycoplasma bovis PG45] gi|312950537|gb|ADR25132.1| NAD+ synthetase [Mycoplasma bovis PG45] Length = 270 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 32/239 (13%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+G+SGGIDSAL ++ A N I++P + L+D A+ K+ + + Sbjct: 46 IVGISGGIDSALVVSLCAKAF-PNNTIGIVMPID-SMMHDLDDIKKLESAINLKFKTISL 103 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 F + + L E ++A NI+ R+R L A + + +++ T N+ E +G Sbjct: 104 E----KSFEEIKKSLNNEVDNLLAISNIKPRLRMTALYAYAQQNNYLVMGTDNQDEYFIG 159 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T YGD P+ L K++V ++A + N +P SI+ K PSA L Sbjct: 160 YFTKYGDGGVDLLPISKLLKSEVREIAKYLN--------------VPESIINKKPSAGLW 205 Query: 475 PHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQA 532 Q+D++ L Y LD + +N+ + ++ +E + S +KR +A Sbjct: 206 EGQSDEDELGFTYNELD----------KYLLNDKDGIRENSIVKIERMHKTSAHKRDKA 254 >gi|332798011|ref|YP_004459511.1| nitrilase superfamily [Acidianus hospitalis W1] gi|332695746|gb|AEE95213.1| nitrilase superfamily [Acidianus hospitalis W1] Length = 267 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 42/260 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK--KSF 62 + I +AQ+ P +GD+ N+ + E D ++F EL ++GY DLV++ K Sbjct: 1 MDIELAQIRPKLGDVEYNLEEHL---EILQTSSADCVIFPELSLTGYVLRDLVYEVFKEA 57 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYS 121 +A + +D K + G ++ + G+L NS VI GN + K LP Y Sbjct: 58 EKAVTKIVDNSKC--------AIFGTIKEVRPGILRNSAVISIEGNYDYIY-KFYLPTYG 108 Query: 122 EFHEKRTFISGYSNDPIV------FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 F E+R F G DP+ ++ I G++ICED W I + L +GA+ +F Sbjct: 109 LFEERRYFQPG---DPLSDVKIFKYKGINFGVVICEDAWHPEPI-EALALKGADAVFIPA 164 Query: 176 ASPYYH-----------NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +SP L K H ++ G + +VN VG Q+E F G S Sbjct: 165 SSPMRRLEENLLIENNWESLIKAHSLMYG------IWTAFVNAVGSQEEEYFWGGSMVSS 218 Query: 225 GQQQLAFQMKHFSEQNFMTE 244 Q + + K F E T+ Sbjct: 219 PQGTIKVKAKKFEEDRIFTK 238 >gi|295704777|ref|YP_003597852.1| carbon-nitrogen family hydrolase [Bacillus megaterium DSM 319] gi|294802436|gb|ADF39502.1| hydrolase, carbon-nitrogen family [Bacillus megaterium DSM 319] Length = 264 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 21/226 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +++LKIA+AQL + D N+ + E A QG D +LF ELF++G+ + V + Sbjct: 1 MRQLKIALAQLRSNLHDKNKNLKRVFGTMEAAKDQGADFVLFPELFLTGFLLNEQV--EE 58 Query: 62 FIQACSSAIDT-LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPN 119 ++ + T +K + G+++GFP + + NS V ++ G I+ KI+L + Sbjct: 59 LAESVEGELITKVKKCAKELQIGVILGFPERHHFKIYNSAVFINKKGEIVGTYRKIHLFD 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLFSL-- 174 HE F SG D I D + G++I D+ + + + L +GAE +F L Sbjct: 119 ----HENSYFTSG---DSIPVFDTPQGKFGVMITYDM-EFPEVARILALKGAEVVFVLCA 170 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 N PY H++ H + + H+ I N+VG +D+ ++ G S Sbjct: 171 NMIPYEHHQ----HIYLRSRALENHIFIAAANKVGLEDDYVYFGES 212 >gi|303228610|ref|ZP_07315436.1| NAD+ synthase [Veillonella atypica ACS-134-V-Col7a] gi|302516702|gb|EFL58618.1| NAD+ synthase [Veillonella atypica ACS-134-V-Col7a] Length = 256 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 34/229 (14%) Query: 280 VLSLRDYVQKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 V +RDY ++N ++G+SGG DS++ AA+ +ALG E V +++P S ++D Sbjct: 13 VAWIRDYFEQNGPACSAVVGISGGKDSSVVAALCKEALGAERVVGVLMPNDVQS--DIDD 70 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-SGIVAE---------NIQSRIRG 388 A LG Y ++ I N + +L +Q E S + N R+R Sbjct: 71 AKEVVAHLGIPYMIVNIG---NAYRALTEAIVQGEGFSNVTGRTDLARDAEINTPPRLRM 127 Query: 389 NILMALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 L A+ + A + T N SE VGY T +GD +G F+PL +L +V Q+ + Sbjct: 128 ATLYAVGQNLPHGARVANTCNGSEDYVGYSTKFGDAAGDFSPLANLVVEEVRQIGRLLD- 186 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 IP +++K+PS L Q+D++ L Y +LD I+ Sbjct: 187 -------------IPHHLVDKTPSDGLS-GQSDEDKLGFTYAVLDRYIR 221 >gi|189347191|ref|YP_001943720.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium limicola DSM 245] gi|189341338|gb|ACD90741.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium limicola DSM 245] Length = 286 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 11/227 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + + I IAQ + V+ + N+++ A E+A + G D I F EL ++GY +D + Sbjct: 1 MHNVTIRIAQTDSVLANFDENLSRHCTAIEDAIKAGADAIAFPELSLTGYNVQDAA-QDI 59 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + S +D L+ + I G D GV NS + + G ++ KI LP Y Sbjct: 60 AMHIEDSRLDELRMLSRKICI-ICGGIELSDDYGVYNSAFMFEDGRSESIHRKIYLPTYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G I + + R+G+ ICED W S + L QGA+ LF L +SP Sbjct: 119 MFEELRYFSAGQHIRAIDSKRLGRIGVAICEDFWHVS-VPYLLAHQGAKLLFVLMSSPLR 177 Query: 181 HN------KLKKRHEIVTGQISHVHLP-IIYVNQVGGQDELIFDGAS 220 + + + + + G + + + VN+ G +D + G S Sbjct: 178 MSPGTGIPAIVSQWQTIAGTYAFLFSTYVACVNRTGNEDSFTYWGNS 224 >gi|148377922|ref|YP_001256798.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma agalactiae PG2] gi|148291968|emb|CAL59360.1| NH(3) dependent NAD(+) synthetase [Mycoplasma agalactiae PG2] Length = 270 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 21/202 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++ V++ ++G+SGGIDSAL A++ A N +++P + LED + Sbjct: 33 IKRRVKRAKAKGCVVGISGGIDSALVASLCAKAF-PNNTLGLVMPIDSMN-HDLEDISKL 90 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 + + K+ + L+N F + + L E +++ NI+ R+R L A + + + Sbjct: 91 ERTINLKFKTV----LLNKSFDEVKKSLNNEVDNLLSISNIKPRLRMIALYAYAQQNNYL 146 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ T N+ E +GY T +GD P+ L K++V +A + N +P Sbjct: 147 VMGTDNQDEYFIGYFTKHGDGGVDLLPISKLLKSEVRMMAKYLN--------------VP 192 Query: 462 PSILEKSPSAELRPHQTDQESL 483 SI+ K PSA L Q+D++ L Sbjct: 193 ESIINKKPSAGLWEGQSDEDEL 214 >gi|302788997|ref|XP_002976267.1| hypothetical protein SELMODRAFT_267968 [Selaginella moellendorffii] gi|300155897|gb|EFJ22527.1| hypothetical protein SELMODRAFT_267968 [Selaginella moellendorffii] Length = 731 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 134/609 (22%), Positives = 219/609 (35%), Gaps = 145/609 (23%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK- 60 ++ +K++ LN D GN+ + + +A G L + EL I+GY +D + Sbjct: 1 MRLVKVSTCSLNQWAMDFEGNLGRINESIRQARAAGSMLRVGPELEITGYGCDDHFLEND 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 + A + L SD GIV +G P N V G I+ +R K L Sbjct: 61 TSAHAWECLAEILSSDLT---YGIVCDIGMPVVSDGVRYNCRVFCLDGKILLIRPKKFLA 117 Query: 119 NYSEFHEKRTFISGYSNDPIV-------------------------FRDIRLGILICEDI 153 N + E R F + ++ ++ F D + + CE++ Sbjct: 118 NDGNYRELRWFAAWQHHNSVIEYKLPEIIWSKTSQKTVTFGDAYVSFLDTAVAVETCEEL 177 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG--- 210 + S+ L G E + + + S + KL R E++ G +Y NQ G Sbjct: 178 FTPSSPHIGLALNGVEIIVNGSGSHHQLRKLNTRIELMQGATHKAGGVYLYANQQGCDGA 237 Query: 211 ------------QDELIFDGASF----------CFDGQQQLAFQ------MKHFSEQNFM 242 +++ G+ F C D F+ + S+ FM Sbjct: 238 RLYYDGCATVFVNGDMVVQGSQFSLADVEVLTACVDLDAVSTFRGSISSLREQASQHKFM 297 Query: 243 TEWHYDQQLSQWNYMSDDS---------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 D +LS+ DDS Y+P +EE A AC L DY+++ Sbjct: 298 PYVSVDFRLSR----PDDSLLLFPTLPILPRYYLP-EEEIALGPACW--LWDYLRRCGAT 350 Query: 294 KVIIGLSGGIDSALCAAI------------------------------------AVDALG 317 ++ LSGG DS+ AAI + + Sbjct: 351 GYLLPLSGGADSSAVAAIVGSMCQLVIRAIEEGDEQVLNDAIRIGNYENGKVPKSAEEFA 410 Query: 318 KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--- 374 V T+ + + +S Q+L AA A +G + L I +V+ SL + + P Sbjct: 411 NRIVFTVYMGSENSSAQTLNRAAQLASQIGASHMDLKIDKIVSALVSLFTSLTGKVPRYK 470 Query: 375 --SGIVAE-----NIQSRIRGNILMALSN--------HSKAMLLTTSNKSEISVGYGTLY 419 G AE N+Q+RIR I L++ ++L ++N E GY T Y Sbjct: 471 VDGGSTAENLALQNLQARIRMVIAYMLASLLPWVKGKRGFFLVLGSANVDEGLRGYLTKY 530 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---- 475 S NP+ + K + W ++ L I ++ P+AEL P Sbjct: 531 DCSSADLNPIGGISKQDLRSFLRWCANN--------LHYPILAEVVSAPPTAELEPIREN 582 Query: 476 -HQTDQESL 483 QTD+E + Sbjct: 583 YSQTDEEDM 591 >gi|302348074|ref|YP_003815712.1| NAD+ synthetase [Acidilobus saccharovorans 345-15] gi|302328486|gb|ADL18681.1| NAD+ synthetase [Acidilobus saccharovorans 345-15] Length = 278 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 19/213 (8%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 E +A ++D+++ ++ +IG+SGG+DSA AV A+G E V +++ + Sbjct: 17 EKAIDAITSFIKDFLESSSVKGFVIGVSGGVDSAATYFAAVKAVGPEKVMALIMHDSTVT 76 Query: 333 P-QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNI 390 P + ++DA + +Y+++ I +V + S + + +P+ V N+++RIR ++ Sbjct: 77 PKEDVDDAKHLIEIARTQYNIIDIAPIVETYRSTIPVY---DPADTVPLGNLRARIRMSL 133 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L +N +L T ++SE +GY T YGD P+ L K+QV +LA Sbjct: 134 LYYYANKFNYAVLGTGDRSEAFLGYFTKYGDGGVDLLPIAPLLKSQVRRLA--------- 184 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 L +P + K S L P QT + L Sbjct: 185 -----LKLGVPEKVAFKPSSPRLWPGQTAEGEL 212 >gi|269797341|ref|YP_003311241.1| NAD+ synthetase [Veillonella parvula DSM 2008] gi|269093970|gb|ACZ23961.1| NAD+ synthetase [Veillonella parvula DSM 2008] Length = 255 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 34/240 (14%) Query: 269 LQEEEADYNACVLSLRDYVQKNNFH-KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L+ ++ NA + +RDY +N + ++G+SGG DS + AA+ +ALG V +++P Sbjct: 2 LENPQSTKNALIQWIRDYFSQNGPNCSAVVGISGGKDSTIVAALCKEALGANRVVGVLMP 61 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE------- 380 S ++DA A LG + + I + +L +Q + +V Sbjct: 62 NGVQS--DIDDAQAVVNHLGIPHMTVNIG---AAYEALAHAIVQAKGYDVVTGRTDLAKD 116 Query: 381 ---NIQSRIRGNILMALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 N R+R L A+ + + A + T N SE VGY T YGD +G F+PL L Sbjct: 117 AIINTPPRLRMTTLYAVGQNLPNGARVANTCNGSEDYVGYSTKYGDSAGDFSPLAQLVVE 176 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +V Q+ + IP +++K PS L Q+D++ L Y ILD I+ Sbjct: 177 EVLQIGKLLD--------------IPSYLVDKVPSDGLS-GQSDEDKLGFTYAILDRYIR 221 >gi|294499427|ref|YP_003563127.1| carbon-nitrogen family hydrolase [Bacillus megaterium QM B1551] gi|294349364|gb|ADE69693.1| hydrolase, carbon-nitrogen family [Bacillus megaterium QM B1551] Length = 264 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 21/226 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ LKIA+AQL + D N+ + E A QG D +LF ELF++G+ + V + Sbjct: 1 MRLLKIALAQLRSNLHDKNKNLKRVFGTMEAAKDQGADFVLFPELFLTGFLLNEQV--EE 58 Query: 62 FIQACSSAIDT-LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 ++ + T +K + G+++GFP + + + NS V ++ G I+ KI+L + Sbjct: 59 LAESVEGELITKVKKYAKELQIGVILGFPERHRFKIYNSAVFINKEGEIVGTYRKIHLFD 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLFSL-- 174 HE F SG D I D + G++I D+ + + + L +GAE +F L Sbjct: 119 ----HENSYFTSG---DSIPVFDTPQGKFGVMITYDM-EFPEVARILALKGAEVVFVLCA 170 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 N PY H++ H + + H+ I N+VG +D+ ++ G S Sbjct: 171 NMIPYEHHQ----HVYLRSRALENHIFIAAANKVGLEDDYVYFGES 212 >gi|303230379|ref|ZP_07317140.1| NAD+ synthase [Veillonella atypica ACS-049-V-Sch6] gi|302514918|gb|EFL56899.1| NAD+ synthase [Veillonella atypica ACS-049-V-Sch6] Length = 256 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 34/226 (15%) Query: 283 LRDYVQKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 +RDY ++N ++G+SGG DS++ AA+ +ALG E V +++P S ++DA Sbjct: 16 IRDYFEQNGPACSAVVGISGGKDSSVVAALCKEALGAERVVGVLMPNDVQS--DIDDAKE 73 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-SGIVAE---------NIQSRIRGNIL 391 LG Y ++ I N + +L +Q E S + N R+R L Sbjct: 74 VVAHLGIPYMIVNIG---NAYRALTKAIVQGEGFSNVTGRTALARDAEINTPPRLRMATL 130 Query: 392 MALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A+ + A + T N SE VGY T +GD +G F+PL +L +V Q+ + Sbjct: 131 YAVGQNLLYGARVANTCNGSEDYVGYSTKFGDAAGDFSPLANLVVEEVRQIGRLLD---- 186 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 IP +++K+PS L Q+D++ L Y +LD I+ Sbjct: 187 ----------IPRHLVDKTPSDGL-SGQSDEDKLGFTYAVLDRYIR 221 >gi|315645139|ref|ZP_07898265.1| NAD+ synthetase [Paenibacillus vortex V453] gi|315279560|gb|EFU42865.1| NAD+ synthetase [Paenibacillus vortex V453] Length = 269 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 26/213 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKEN---VQTIMLPYKYTSPQSL 336 L++YV+ + ++I +SGGIDSA+ A + A D L +E +T+ + + + Sbjct: 30 LKNYVKNSGTSGLLIAISGGIDSAVAAGLCKRATDELTEETGKEYKTLGVFQPFGEQADI 89 Query: 337 EDAAACAKALGCKYDV-LPIHDLVNHF-----FSLMSQFLQEEPSGIVAENIQSRIRGNI 390 D+ A AKA K+ V I + VN L + + + S N+++R+R + Sbjct: 90 SDSYATAKAFDLKHTVETNIEEAVNEIALEVEHGLKNIGVHKHISVPGKGNVKARVRMVV 149 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 AL+ +++ T + SE G+ T +GD + PL L K QV LAS+ Sbjct: 150 QYALAFEQNLIVVGTDHASEAITGFYTKWGDGAVDITPLSSLNKRQVRMLASY------- 202 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 LG +P SIL+K+PSA L QTD++ L Sbjct: 203 --LG-----VPQSILDKAPSAGLWEGQTDEKEL 228 >gi|70605861|ref|YP_254731.1| carbon-nitrogen hydrolase [Sulfolobus acidocaldarius DSM 639] gi|68566509|gb|AAY79438.1| carbon-nitrogen hydrolase [Sulfolobus acidocaldarius DSM 639] Length = 271 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 36/252 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ +AQ++ +GD+ N+ K + ++ + ++F EL ++GY +DLV+ + Sbjct: 3 IKVELAQISSKLGDVEYNLNKHLEILQTSS---AECVVFPELSLTGYVLKDLVY-----E 54 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L + I+VGF ++ + G+L + + + I K LP Y F Sbjct: 55 VYKDSENALNKIAENARGCIIVGFIKEVRPGILRNTAGVILNSQINYVYKFYLPTYGLFE 114 Query: 125 EKRTFISGYSNDPIV------FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 E+R F G +PI ++ +R G+++CED W I + L GA+ +F +ASP Sbjct: 115 ERRYFQPG---NPIRDLNIFEYKGLRFGVIVCEDAWHYEPI-EALTMLGADAIFIPSASP 170 Query: 179 YYH------------NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 L K H ++ G + ++ N VG Q+E F G S Sbjct: 171 MRRLTSHKLFIQDNWEALLKAHSLING------IWTLFSNSVGSQEEEYFWGGSMAVSPL 224 Query: 227 QQLAFQMKHFSE 238 ++ + K F E Sbjct: 225 GEIKAKAKLFEE 236 >gi|39938609|ref|NP_950375.1| hypothetical protein PAM_123 [Onion yellows phytoplasma OY-M] gi|39721718|dbj|BAD04208.1| hypothetical protein [Onion yellows phytoplasma OY-M] Length = 255 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 24/206 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +A VG+ N A + N+ +LF EL +S Y DL F+ +F++ Sbjct: 7 IKIELASPPLTVGNPLKN---AYSMQNVLNKSKASFVLFPELCLSSYTAGDLFFETTFLE 63 Query: 65 ACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A+D LK+++ +G ++G P E + N VI+ I+ + K +PNY EF Sbjct: 64 QNFQALDWLLKNNSFEGV--YILGMPLALHEVLFNVAVIIQKDKILGITPKKTIPNYKEF 121 Query: 124 HEKRTFISGYSNDP--------------IVF----RDIRLGILICEDIWKNSNICKHLKK 165 EKR F SG + + ++F D+ G+ IC+D+W + L Sbjct: 122 SEKRWFQSGKTCESQYIQILGQTVPFGDVLFINSQFDLIFGVEICQDLWTVFSPGDLLSL 181 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIV 191 GA +F+ +AS + KL R V Sbjct: 182 NGAHLIFNPSASTDHIGKLDLRKNAV 207 >gi|333029952|ref|ZP_08458013.1| NAD+ synthetase [Bacteroides coprosuis DSM 18011] gi|332740549|gb|EGJ71031.1| NAD+ synthetase [Bacteroides coprosuis DSM 18011] Length = 640 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 112/526 (21%), Positives = 198/526 (37%), Gaps = 62/526 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + A+ + + LI+F EL ++ DL Sbjct: 7 IRVAAAVPEVKVADCMYNAKEIINIINGASEKDVSLIVFPELALTSASCGDLYGSDILCN 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ + +T++ + ++G P + +LN ++ G + A K+ Sbjct: 67 SAQDALLYVLDETYEAESISIIGMPLKYGNSILNVAAVVHKGAVRAFVPKVGQ------S 120 Query: 125 EKRTF--ISGYSNDPIVFRD--------IRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 E R F + G + I F D + K N +L + + L Sbjct: 121 ENRFFSSVKGCLDLEISFNDDLIPLTNQLNFSGFDFSFAVKFENQLANLNSTNTDVVCFL 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL--IFDGASFCFDGQQQLA-- 230 + P + K+ ++T + + + IY G+ +F G +F + LA Sbjct: 181 SNKPEIVGRNKQLKGLLTVKSALNNQAYIYAAPGFGESSTDDVFAGNAFVVECGSVLAES 240 Query: 231 --FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD------------- 275 F +K N + SQ N + +D ++ P+ D Sbjct: 241 DLFHLKSSYIYNDIDLAKTSVFSSQLNVLDEDEGENVFFPMMSAVYDSNKIVRHIDRFPF 300 Query: 276 --------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK--- 318 +N VL L + N KVI+G+SGG+DS L + + A+ K Sbjct: 301 LALDENRDIYYNEAFNIQVLGLVKRLIHINCKKVILGISGGLDSTLALLVCLRAMDKMGL 360 Query: 319 --ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPS 375 EN+ I +P TS ++ ++A +G + I + + HF + + Sbjct: 361 PHENILGITMPGFGTSGRTYKNAQILMTKMGITSREISIKEACIQHFKDINHDI---DVQ 417 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 + EN Q+R R ILM ++N A+++ T + SE+++G+ T GD + + KT Sbjct: 418 DVTYENSQARERTQILMDIANKENALVIGTGDLSELALGWATYNGDHMSMYAMNASVPKT 477 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 V L W L IL+ S EL+P D E Sbjct: 478 LVQDLVRWAAEKETNEELSKTL----LDILDTPISPELKPASEDDE 519 >gi|206896320|ref|YP_002247151.1| NAD+ synthetase [Coprothermobacter proteolyticus DSM 5265] gi|238064808|sp|B5Y8Q4|NADE_COPPD RecName: Full=NH(3)-dependent NAD(+) synthetase gi|206738937|gb|ACI18015.1| NAD+ synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 296 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 55/261 (21%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR + H +IG+SGG+DSA+ + V A+GKENV ++LP + T +S A + Sbjct: 15 LRKALVSERKHGYLIGVSGGLDSAVVLKLLVQAVGKENVLGLILPDRDTEKKSTTLARSL 74 Query: 343 AKALGCKYDVLPIHDLVNHF--FSLMSQFL------------------------------ 370 + Y V+ + L+ H + M FL Sbjct: 75 LEQEKVPYKVISMTPLLRHLGVYKDMPLFLLPTRGLKESIVRRFYNDYTKKLNKPVFFAQ 134 Query: 371 QEEP--------SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 EEP GI I+ R+R L + + +L+ +N SE +G+ YGD Sbjct: 135 WEEPPTQLPYFYEGIAYYRIKHRVRMATLYYYAEKNDYLLVGCTNLSERLIGFYVKYGDD 194 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 P+ LYKT+V QL+ + + +P I + PS +L P TD+ S Sbjct: 195 VCDVAPIAHLYKTEVRQLSEYLS--------------VPEDIRNRPPSPDLIPGITDEYS 240 Query: 483 LP-PYPILDDIIKRIVENEES 502 L Y LD I+ + E + + Sbjct: 241 LGINYETLDQILAGLEEGKTA 261 >gi|194336170|ref|YP_002017964.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pelodictyon phaeoclathratiforme BU-1] gi|194308647|gb|ACF43347.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pelodictyon phaeoclathratiforme BU-1] Length = 286 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 11/223 (4%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K+ IAQ++ + + N+A+ EEA R G D I F EL ++GY +D + + Sbjct: 5 KLRIAQIDCTLANFDDNLAQHCALTEEAIRDGADAIAFPELSLTGYNVQDAA-QDIAMHI 63 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + D L+ + I G + GV NS ++ + G +V KI LP Y F E Sbjct: 64 EDARFDPLRELSRKICI-ICGGIELSNDYGVYNSALMFEEGVGQSVHRKIYLPTYGMFEE 122 Query: 126 KRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 R F +G I + + ++G+ ICED W S + L QGA+ LF L +SP + Sbjct: 123 LRYFSAGQQIKTITSKRLGQIGVAICEDFWHVS-VPYLLAHQGAKLLFVLMSSPLRMSPG 181 Query: 185 KKRHEIVT-GQISHVHLPIIY------VNQVGGQDELIFDGAS 220 IVT Q ++ VN+VG +D + G S Sbjct: 182 SGNPAIVTQWQTIASTYSFLFSSYVACVNRVGNEDSFTYWGNS 224 >gi|221117412|ref|XP_002162571.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 874 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 131/593 (22%), Positives = 223/593 (37%), Gaps = 119/593 (20%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A L D GN+ + + A QG L EL I GY D + Sbjct: 1 MQRKVTLATCSLAQWSMDFEGNLRRILESIRLAKEQGARYRLGPELEIPGYGCNDHFSES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + ++ + +T + VG P + N VI II +R K L Sbjct: 61 DTLLHSWESLACILENTVCENLIVDVGMPVLYNHALYNCRVIFLNKRIILIRPKKTLAID 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 + E R F I+G P IV RD LG +C++++ Sbjct: 121 ENYRESRWFTPWIKDYEYEELMLPPIITKITGQVKVPFGEAIIVARDTVLGCEVCQELFS 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE-L 214 + ++ QG E + + +AS + K+ +R ++++ S + +Y G E L Sbjct: 181 PQSPHLNMALQGVEIVTNGSASNFELQKMSRRIKLISDATSKLGGVYLYSAIKGCDGERL 240 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNF--------MTEWHYDQQLSQWNYMSDDS----- 261 +DG F +L Q K FS + E ++ SQ+ + S Sbjct: 241 YYDGPCMIFK-NGELVGQGKQFSLNEVEVVSSTIDLEEVSLYRRSSQFGTKTSLSQKYPR 299 Query: 262 ---------ASTMYIPL-----------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 ++ + PL +EE A AC L DY++++ + LSG Sbjct: 300 LDIDFCLCVTNSFFAPLSPVIDPVIYQPEEEIALGPACW--LWDYLRRSGMGGFFLPLSG 357 Query: 302 GIDSALCAAI-------AVDALGKENVQTI----------------------------ML 326 G+DS+ A I DA+ + ++QTI + Sbjct: 358 GVDSSATACIVASMCRLVCDAIKQGSLQTISDIQDIVKDSTYIPTDPKELCNRIFVTCYM 417 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SG 376 + +S Q+ E A A A +G + + I + S+ S ++ P Sbjct: 418 GTENSSAQTRERAKALANDIGSYHLGIVIDTAIQAILSIFSAVTKKTPRFSVFGGSNTEN 477 Query: 377 IVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +N+Q+R+R + L+ S+ ++L ++N E +GY T Y S NP Sbjct: 478 LALQNVQARVRMVTSYLFAQLTLWSRGKQGGLLVLGSANVDECLLGYMTKYDCSSADINP 537 Query: 429 LKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 + + KT + + + TS +G L PP+ E +P E R QTD+ Sbjct: 538 IGGISKTDLKKFVFYCVEKFNFTSLIGILGA--PPTA-ELTPLDEGRLQQTDE 587 >gi|124027805|ref|YP_001013125.1| NAD synthetase [Hyperthermus butylicus DSM 5456] gi|189030450|sp|A2BLB9|NADE_HYPBU RecName: Full=NH(3)-dependent NAD(+) synthetase gi|123978499|gb|ABM80780.1| NH(3)-dependent NAD(+) synthetase [Hyperthermus butylicus DSM 5456] Length = 276 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 30/269 (11%) Query: 275 DYNACVLSLRD----YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 DY S+ + YV+ + V++GLSGG+DS + V ALG E V +++P Sbjct: 12 DYEGVARSIEEFIKGYVESSGAKGVVVGLSGGVDSTTTLYLLVRALGPERVLVLVMPDSD 71 Query: 331 TSPQS-LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 +P+ + DA A+ LG +Y ++ I +V + M + G N+++R+R Sbjct: 72 VTPEEDVHDAVGIAERLGVRYKLIDIKPIVASYLVAMGEAPDRRSKG----NLRARVRMT 127 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +L +N ++ T ++SE+ +GY T YGD + F P+ LYK+QV +LA Sbjct: 128 LLYLYANMEGLLVAGTGDRSELLIGYFTKYGDGAVDFLPIGCLYKSQVRRLA-------- 179 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVEN----EESFI 504 L +P I K S L P Q ++ L Y +D I+ + + EE+ Sbjct: 180 ------LHLGVPEKIALKPSSPRLWPGQLAEDELGMKYEEIDLILYALFDKGLSPEEA-- 231 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 E VR V L SE+KR P Sbjct: 232 AKATGLPIEKVRRVLELHRASEHKRSLPP 260 >gi|110005444|emb|CAK99766.1| putative nad synthase protein [Spiroplasma citri] Length = 249 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 32/207 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++ V K + VI+GLSGGIDSA+ + +A A ++++ IM + Q C Sbjct: 15 IKSEVTKVHCQGVIVGLSGGIDSAVVSLLAKQAFPEQHLTVIMPCHSDYFDQE------C 68 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQF------LQEEPSGIVAENIQSRIRGNILMALSN 396 A+ L H L N+ L + L P + NI+ R+R L AL+ Sbjct: 69 AQLLVNN------HQLKNNLVDLTGTYDNLIATLALPPHQLAFANIKPRLRMTTLYALAQ 122 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 M+L T N E VGY T YGD + P+ L K++V Q A LG Sbjct: 123 SHNYMVLGTDNADEWHVGYFTKYGDGAADLVPIIHLLKSEVQQAAQL---------LG-- 171 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESL 483 +P +I+ + P+A L QTD++ L Sbjct: 172 ---VPTAIISRPPTAGLWASQTDEKEL 195 >gi|85057878|ref|YP_456794.1| glutamine-dependent NAD(+) synthetase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789983|gb|ABC65715.1| glutamine-dependent NAD(+) synthetase [Aster yellows witches'-broom phytoplasma AYWB] Length = 635 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 24/206 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +A VG+ N A + + +LF EL +S Y DL F+ +F++ Sbjct: 7 IKIELASPPLTVGNPLKN---AYSMQNVLKKSKASFVLFPELCLSSYTAGDLFFETNFLE 63 Query: 65 ACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A+D LK+++ +G ++G P E + N VI+ I+ + K +PNY EF Sbjct: 64 QNFQALDWLLKNNSFEGVY--ILGMPLALHEVLFNVAVIIQKDKILGITPKKTIPNYKEF 121 Query: 124 HEKRTFISGYSNDP--------------IVF----RDIRLGILICEDIWKNSNICKHLKK 165 EKR F SG + + ++F D+ G+ IC+D+W + L Sbjct: 122 SEKRWFQSGKTCESQYIQILGQTVPFGDVLFINSQFDLIFGVEICQDLWTVFSPGDLLSL 181 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIV 191 GA +F+L+AS + KL R V Sbjct: 182 NGAHLIFNLSASTDHIGKLDLRKNAV 207 >gi|153812826|ref|ZP_01965494.1| hypothetical protein RUMOBE_03233 [Ruminococcus obeum ATCC 29174] gi|149831038|gb|EDM86127.1| hypothetical protein RUMOBE_03233 [Ruminococcus obeum ATCC 29174] Length = 672 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 102/464 (21%), Positives = 188/464 (40%), Gaps = 80/464 (17%) Query: 143 IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPI 202 +++ ICED+W + GA + +L+AS K R +V+ Q + + Sbjct: 190 LQIAAEICEDLWVPNPPSVAHAYHGANLIVNLSASDEVVGKDSYRRSLVSAQSARLLCGY 249 Query: 203 IYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHF---------------SEQNFMTEW 245 IY G+ ++++ G + + LA + + F +E+ MT Sbjct: 250 IYATAGEGESTQDVVYGGQNLIAENGTILA-ESRRFVNGIIYADLDIHRLDNERRRMTTC 308 Query: 246 HYDQQLS-----------------QWNYMSDDSASTMYIPLQEEEAD------YNACVLS 282 + L+ + ++ S ++P +EE + N + Sbjct: 309 QFAPDLAPEGQDISYNEALFTLEREETKLTRKFDSRPFVPGIKEERERRCDEILNIQAMG 368 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAV---DALG--KENVQTIMLPYKYTSPQSLE 337 L+ + + +IGLSGG+DS L + V D LG + + + +P T+ ++ Sbjct: 369 LKKRLAHIHCQNAVIGLSGGLDSTLALLVTVRAFDMLGMDRGKITAVTMPCFGTTDRTYN 428 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 +A + +K LG + I + VN F + E + EN Q+R R ILM ++N Sbjct: 429 NACSLSKCLGATLKEVNIREAVNLHFRDIGH--DPEVHDVTYENGQARERTQILMDIANQ 486 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 S +++ T + SE+++G+ T GD + + KT V L + + T L Sbjct: 487 SGGIVIGTGDLSELALGWATYNGDHMSMYAVNASVPKTLVRHLVRY---YADTCEDQKLA 543 Query: 458 EVIPPSILEKSPSAELRP------HQTDQESLPPYPILD-------------DIIKRIVE 498 +++ IL+ S EL P Q ++ + PY + D I R+ + Sbjct: 544 DIL-LDILDTPVSPELLPPKDGVISQKTEDLVGPYELHDFFLYYMLRWTFPPKKIFRLAQ 602 Query: 499 NEESFINNDQEYNDETV----RYVEHLLYGSEYKRRQAPVGTKI 538 N +F EY+DET+ + + ++KR P G K+ Sbjct: 603 N--AFAG---EYDDETILKWLKTFYRRFFMQQFKRSCLPDGPKV 641 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 59/111 (53%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 E QG +++F EL I+ Y DL ++++ ++ + + +T D A I VG P + Sbjct: 4 EMEEQGAKVMVFPELCITAYTCGDLFWQENLLEEAKVQLVRIAEETADVDALIFVGLPLE 63 Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD 142 + + N L+ G I+ KINLPNY+EF+E R F SG + D V D Sbjct: 64 YKGKLYNVAAGLNHGEILGFVPKINLPNYNEFYEARYFTSGENLDGTVHID 114 >gi|294794888|ref|ZP_06760023.1| NAD+ synthetase [Veillonella sp. 3_1_44] gi|294454250|gb|EFG22624.1| NAD+ synthetase [Veillonella sp. 3_1_44] Length = 255 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 34/240 (14%) Query: 269 LQEEEADYNACVLSLRDYVQKNNFH-KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L+ + +A + +RDY KN + ++G+SGG DS + AA+ +ALG + V +++P Sbjct: 2 LENPQVTKDALIQWIRDYFGKNGPNCSAVVGISGGKDSTIVAALCKEALGADRVVGVLMP 61 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV--------- 378 S ++DA A LG + + I + +L +Q + +V Sbjct: 62 NGVQS--DIDDAQAVVNHLGIPHMTVNIG---AAYEALTHAIVQAKGYDVVTGRTDLSKD 116 Query: 379 -AENIQSRIRGNILMALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 A N R+R L A+ + + A + T N SE VGY T YGD +G F+PL L Sbjct: 117 AAINTPPRLRMATLYAVGQNLPNGARVANTCNGSEDYVGYSTKYGDSAGDFSPLAQLVVE 176 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +V Q+ + IP +++K PS L Q+D++ L Y ILD I+ Sbjct: 177 EVRQIGKLLD--------------IPLHLVDKVPSDGLS-GQSDEDKLGFTYAILDRYIR 221 >gi|325967955|ref|YP_004244147.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vulcanisaeta moutnovskia 768-28] gi|323707158|gb|ADY00645.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vulcanisaeta moutnovskia 768-28] Length = 296 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 8/238 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREE-ANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L+I + Q + +GD+ N+ + +A E G DLI+ EL++ GY +D+ F+ + Sbjct: 2 LRIHLLQYSSKLGDVDFNLGRLIKAMETLCVGDGADLIVTPELYLPGYMSKDMFFQIAE- 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYS 121 I L + ++ GF +D++ + N+ V + ++AV K +LP+Y Sbjct: 61 PISGKTITKLAMEARRRNCHVIAGFAERDEDTHVLYNTAVAVGPNGVLAVYRKRHLPSYG 120 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G + P++ R+GI IC D + + + + +GAE ++A+P Sbjct: 121 IFDEYRYFGIGKGDIPVININGHRVGIAICYDAFY-PEVSRVMMLRGAEVHVYISAAP-D 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 ++L ++ + +V +YVN VG D L F G S + + + K++ E Sbjct: 179 MSRLHFETFMIARALENVAY-TVYVNTVGQYDGLGFFGGSHVVNPLGNVLIKAKYYEE 235 >gi|330835240|ref|YP_004409968.1| NAD synthetase [Metallosphaera cuprina Ar-4] gi|329567379|gb|AEB95484.1| NAD synthetase [Metallosphaera cuprina Ar-4] Length = 244 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 23/203 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RDY+ K+ ++G+SGGIDSA+ A + A+ +N +++P K T + LEDA A Sbjct: 1 MRDYIIKSGKKGGVVGVSGGIDSAVTATLLSKAV--DNFYFLIMPSKSTPKEDLEDALAL 58 Query: 343 AKALGCK--YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 L K V+ I D+V F L+ + ++ N+++R R +L A + Sbjct: 59 TDLLNGKDRRSVIWIDDVVERFSKLV-----DVNDKVIVGNVKARTRMILLYAFAQKLDY 113 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +++ T +KSE+ +GY T YGD P+ DL+KTQV +L + N + Sbjct: 114 LVIGTGDKSELLLGYFTKYGDGGVDVLPIGDLFKTQVRRLGEYLN--------------L 159 Query: 461 PPSILEKSPSAELRPHQTDQESL 483 P +I+ K S L Q+ +E L Sbjct: 160 PKNIVRKPSSPALWEGQSAEEEL 182 >gi|126698374|ref|YP_001087271.1| NH3-dependent NAD(+) synthetase [Clostridium difficile 630] gi|255099909|ref|ZP_05328886.1| NH3-dependent NAD(+) synthetase [Clostridium difficile QCD-63q42] gi|255305798|ref|ZP_05349970.1| NH3-dependent NAD(+) synthetase [Clostridium difficile ATCC 43255] gi|115249811|emb|CAJ67628.1| NH3-dependent NAD(+) synthetase [Clostridium difficile] Length = 251 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 39/258 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L + V + N +I+G+SGGIDSA+ A + A EN +++ K ++PQ EDA Sbjct: 15 LINKVNEANAKGLIVGVSGGIDSAVVANLIKKAF-PENSMGVIMSIK-SNPQDREDALKV 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFL---------QEEPSGIVAENIQSRIRGNILMA 393 + GC + L + DL+ +++ + +EE + N+++R+R + + Sbjct: 73 IE--GCDIEYLDL-DLIEPQSAILDMVVGNLKDKHLYREEYLKMTDANLRARVRMSTIYT 129 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++N+ +++ T N +EI GY T +GD P+ +L K +V++ W G+ L Sbjct: 130 IANNLGYLVVGTDNAAEIHTGYFTKFGDGGVDILPIANLTKGEVYE---WAKELGVHEDL 186 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESFINNDQEYND 512 + K+PSA L QTD++ + Y ++D +++ + + DQE Sbjct: 187 -----------INKAPSAGLWEGQTDEDEMGTTYNMIDAVLEGRL---DEVPKRDQE--- 229 Query: 513 ETVRYVEHLLYGSEYKRR 530 +E L SE+KR+ Sbjct: 230 ----IIERLHRLSEHKRK 243 >gi|255654843|ref|ZP_05400252.1| NH3-dependent NAD(+) synthetase [Clostridium difficile QCD-23m63] gi|296449586|ref|ZP_06891363.1| NAD(+) synthase [Clostridium difficile NAP08] gi|296878091|ref|ZP_06902106.1| NAD(+) synthase [Clostridium difficile NAP07] gi|296261650|gb|EFH08468.1| NAD(+) synthase [Clostridium difficile NAP08] gi|296430844|gb|EFH16676.1| NAD(+) synthase [Clostridium difficile NAP07] Length = 251 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 39/258 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L + V + N +I+G+SGGIDSA+ A + A EN +++ K ++PQ EDA Sbjct: 15 LINKVNEANAKGLIVGVSGGIDSAVVANLIKKAF-PENSMGVIMSIK-SNPQDREDALKV 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFL---------QEEPSGIVAENIQSRIRGNILMA 393 + GC + L + DL+ +++ + +EE + N+++R+R + + Sbjct: 73 IE--GCDIEYLDL-DLIEPQSAILDMVVGNLKDKHLYREEYLKMTDANLRARVRMSTIYT 129 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++N+ +++ T N +EI GY T +GD P+ +L K +V++ W G+ L Sbjct: 130 IANNLGYLVVGTDNAAEIHTGYFTKFGDGGVDILPIANLTKGEVYE---WAKELGVHEDL 186 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESFINNDQEYND 512 + K+PSA L QTD++ + Y ++D +++ + + DQE Sbjct: 187 -----------INKAPSAGLWEGQTDEDEMGTTYNMIDAVLEGRL---DEVPKRDQE--- 229 Query: 513 ETVRYVEHLLYGSEYKRR 530 +E L SE+KR+ Sbjct: 230 ----IIERLHRLSEHKRK 243 >gi|294793075|ref|ZP_06758221.1| NAD+ synthetase [Veillonella sp. 6_1_27] gi|294456020|gb|EFG24384.1| NAD+ synthetase [Veillonella sp. 6_1_27] Length = 255 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 28/237 (11%) Query: 269 LQEEEADYNACVLSLRDYVQKNNFH-KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L+ +A +A + +RDY KN + ++G+SGG DS + AA+ +ALG + V +++P Sbjct: 2 LENPQATKDALIQWIRDYFGKNGPNCSAVVGISGGKDSTIVAALCKEALGADRVVGVLMP 61 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPI---HDLVNHFFSLMSQF----LQEEPSGIVAE 380 S ++DA LG + + I ++ + H + + + S A Sbjct: 62 NGVQS--DIDDAQTVVNHLGIPHMTVNIGAAYEALTHAIVQAKGYDAVTGRADLSKDAAI 119 Query: 381 NIQSRIRGNILMALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 N R+R L A+ + + A + T N SE VGY T YGD +G F+PL L +V Sbjct: 120 NTPPRLRMATLYAIGQNLPNGARVANTCNGSEDYVGYSTKYGDSAGDFSPLAQLVVEEVR 179 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 Q+ + IP +++K PS L Q+D++ L Y ILD I+ Sbjct: 180 QIGKLLD--------------IPLHLVDKVPSDGLS-GQSDEDKLGFTYAILDHYIR 221 >gi|119357679|ref|YP_912323.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides DSM 266] gi|119355028|gb|ABL65899.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 284 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 11/223 (4%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K+ IAQ + + + N+A+ EEA R G D I F EL ++GY +D + + Sbjct: 4 KLRIAQTDCTLANFDENLARHCALTEEAIRDGADAIAFPELSLTGYNVQDAA-QDMAMHL 62 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + L+ + I G D GV NS + + G +V KI LP Y F E Sbjct: 63 HDERMKPLR-ELSSRICIICGGIELSDDYGVFNSAFMFEDGRAESVHRKIYLPTYGMFEE 121 Query: 126 KRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 R F +G + + + R+GI ICED W S + L QGA+ L + +SP + Sbjct: 122 LRYFSAGKHIQAVNSKRLGRIGIAICEDFWHVS-VPYLLAHQGAKLLIVMMSSPLRMSPG 180 Query: 185 KKRHEIVTG----QISHVHLPIIYV---NQVGGQDELIFDGAS 220 EIV+ ++ L YV N+ G +D + G S Sbjct: 181 SGTPEIVSKWQNISCTYAFLFSSYVATINRTGNEDSFTYWGNS 223 >gi|291320647|ref|YP_003515912.1| NH(3) dependent NAD(+) synthetase [Mycoplasma agalactiae] gi|290752983|emb|CBH40959.1| NH(3) dependent NAD(+) synthetase [Mycoplasma agalactiae] Length = 270 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 21/202 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++ V++ ++G+SGGIDSAL A++ A N +++P + LED + Sbjct: 33 IKRRVKRAKAKGCVVGISGGIDSALVASLCAKAF-PNNTLGLVMPID-SMNHDLEDISKL 90 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAM 401 +A+ K+ + L++ F + + L + +++ NI+ R+R L A + + + Sbjct: 91 ERAINLKFKTV----LLDKSFDEVKKSLNNDVDNLLSISNIKPRLRMIALYAYAQQNNYL 146 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ T N+ E +GY T +GD P+ L K++V +A + N +P Sbjct: 147 VMGTDNQDEYFIGYFTKHGDGGVDLLPISKLLKSEVRMMAKYLN--------------MP 192 Query: 462 PSILEKSPSAELRPHQTDQESL 483 SI+ K PSA L Q+D++ L Sbjct: 193 ESIINKKPSAGLWEGQSDEDEL 214 >gi|315055327|ref|XP_003177038.1| glutamine-dependent NAD(+) synthetase [Arthroderma gypseum CBS 118893] gi|311338884|gb|EFQ98086.1| glutamine-dependent NAD(+) synthetase [Arthroderma gypseum CBS 118893] Length = 704 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 128/588 (21%), Positives = 213/588 (36%), Gaps = 131/588 (22%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L D GN + + +A G L + EL I GY D F+ C Sbjct: 7 VATCSLRNWALDFEGNTKRIIESIHKAKAAGATLRVGPELEICGYSCLDHFFEADLYLHC 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + D G + +G P + N VI G I+ +R K+ L N + E Sbjct: 67 WEMLCIILKDRSCDGILLDIGMPVMHRNNRFNCRVICLNGKILLIRPKLWLANDGIYREM 126 Query: 127 RTFI--------------------SGYSNDPI-----VFRDIRLGILICEDIWKNSNICK 161 R FI G + PI D +G+ CE+++ + Sbjct: 127 RHFIPWVGPRHVEEYYLPRMVKKIQGTTKVPIGDAVISTTDTCVGMETCEELFTPQSPHN 186 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGAS 220 + G E + + + S + KL R ++ +Y N +G D L FDG++ Sbjct: 187 DMSLNGVEIMTNSSGSHHTLRKLHVRVSLILEATRKNGGIYLYSNHLGCDGDRLYFDGSA 246 Query: 221 F------------------------CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNY 256 D ++ +++ M Y + ++++ Sbjct: 247 MIIVNGSLVAQGNQFTLDDVDVVTAVIDLEEVRSYRCTPSRGHQAMKAGVYTRVETEFSL 306 Query: 257 MSD--DSASTM----------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 SD D +++ Y P +EE A C L DY++++ ++ LSGGID Sbjct: 307 SSDIGDRDTSLRPSLVIEPRYYYP-EEEIALSTGCWLW--DYLRRSGTAGYLLPLSGGID 363 Query: 305 SALCAA-------IAVDALGKENVQ-----------TIMLP------------------Y 328 S A + +DA+ N Q T+ LP Sbjct: 364 SCATAMTVFSMCQLVIDAIKAGNEQVIKDCKRLADYTLELPNTPQELCHQLFHTIYMGMS 423 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------GIV 378 K +S ++ E A +KA+G + L I D+ +L+ ++L +P ++ Sbjct: 424 KQSSKETRERARELSKAIGSYHIDLDIDDVYEAQKNLVVKYLDFDPKFRSQGGTNAENLM 483 Query: 379 AENIQSRIRGNILMALSN---------HSKAML-LTTSNKSEISVGYGTLYGDMSGGFNP 428 +NIQ+R R + H A+L L ++N E GY T Y S NP Sbjct: 484 LQNIQARSRMVTAYEFAQLLPTTRKRPHGGALLVLGSANVGEALRGYYTKYDCSSADINP 543 Query: 429 LKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 + L K+ + + +W S+ I G LE +P+AEL P Sbjct: 544 IGGLDKSDLKRFIAWAEKSYAIPCLRG---------FLEATPTAELEP 582 >gi|309792325|ref|ZP_07686795.1| NAD synthetase [Oscillochloris trichoides DG6] gi|308225640|gb|EFO79398.1| NAD synthetase [Oscillochloris trichoides DG6] Length = 322 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 76/268 (28%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 EA+ N V +R +Q++ + ++GLSGGIDSA +AV A G E V +M+P K + Sbjct: 13 EAETNHIVTLMRQIIQQDFRRRGAVVGLSGGIDSATVLGLAVRAFGAERVLAVMMPEKAS 72 Query: 332 SPQS----------------LEDAAACAKALGC-------------KYD--------VLP 354 SP S ED A + LGC YD VLP Sbjct: 73 SPVSEAYALQLAAKFGVQAIKEDLTAGLEGLGCYARQDEAVRSVFPDYDPAVDKIKLVLP 132 Query: 355 IHDLVN----HFFSL---------------MSQFLQEEPSGIVAENIQSRIRGNILMALS 395 DL+ + +SL ++ +LQ + A N++ R R +L + Sbjct: 133 -GDLLERGSLNVYSLSLTGADGVEQRRVLPVAAYLQI----VAASNMKQRSRMLMLYYHA 187 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 ++ T+N++E + G+ YGD P++ LYKTQ++QLA + LG Sbjct: 188 EQRNYAVIGTANRNEHAQGFFVKYGDGGADIQPIQHLYKTQIYQLAHY---------LGV 238 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESL 483 E+I ++P+ + + QE Sbjct: 239 TQEIIA-----RTPTTDTYTAECSQEEF 261 >gi|325066770|ref|ZP_08125443.1| NAD synthetase [Actinomyces oris K20] Length = 365 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 29/241 (12%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALGK--ENVQTIMLPYKY 330 YN V +L + K++IG+SGG+DS + AA A+D LG+ ++ I +P Sbjct: 18 YNIQVAALVQRLGAIGNPKIVIGVSGGLDSTHALIVAARAMDRLGRPRSDIHAITMPGFA 77 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE------PSG-------- 376 TS + +A A LGC ++ L I + M E P G Sbjct: 78 TSAGTRRNAEDLAVGLGCTFEELDIRATATQMLTEMGHPYGEYARNGVLPEGASERELYD 137 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKT 435 + EN+Q+ +R + L ++NH ++L T + SE+++G+ T GD + + KT Sbjct: 138 VTFENVQAGLRTDFLFRIANHRGGIVLGTGDLSELALGWCTFGVGDQMAHYGVNAGIPKT 197 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQESLPPYPIL 489 + L W + G+ T + SIL+ S EL P Q+ Q + PY + Sbjct: 198 LIQHLIRWVVAEGLFDEAVGRTLL---SILDTEISPELVPAEAGGAIQSTQAKIGPYALQ 254 Query: 490 D 490 D Sbjct: 255 D 255 >gi|332798010|ref|YP_004459510.1| NAD+ synthetase [Acidianus hospitalis W1] gi|332695745|gb|AEE95212.1| NAD+ synthetase [Acidianus hospitalis W1] Length = 280 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 35/292 (11%) Query: 271 EEEADYNACVLS------LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 +E D N V+S + +Y+ ++ + IIGLSGGIDS++ + A +N + Sbjct: 8 QELKDVNYSVISEYIIRRISEYITESGKNGGIIGLSGGIDSSVTTVLLSKA--TQNYFIL 65 Query: 325 MLPYKYTSPQSLEDAAACAKALGC--KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI 382 ++P T + +EDA +G KY ++ I ++ F + + + +V NI Sbjct: 66 LMPSSSTPQKDMEDAKKIINMIGANNKYKIINIDPILESFKNEI-----KTNDKLVLGNI 120 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++RIR +L A + +++ T +KSE+ +GY T YGD P+ DLYKTQV +L Sbjct: 121 KARIRMILLYAYAQIMNYLVIGTGDKSELLLGYFTKYGDGGVDILPIGDLYKTQVRELGR 180 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVE--- 498 + LG +P I+ K S L QT + L Y I+D I+ VE Sbjct: 181 Y---------LG-----LPEDIVTKPSSPALWEGQTAEGELGVSYDIIDAILYLRVEKMM 226 Query: 499 NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 N ES I D + + E V ++ ++ S++K R P +++ ++ D YP Sbjct: 227 NIES-IAKDLQIDTEIVHKIDRMIKTSQHK-RLPPEIFRLSGRAINSDWRYP 276 >gi|294101865|ref|YP_003553723.1| NAD+ synthetase [Aminobacterium colombiense DSM 12261] gi|293616845|gb|ADE56999.1| NAD+ synthetase [Aminobacterium colombiense DSM 12261] Length = 248 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 34/242 (14%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 ++GLSGGIDSAL A + A G + IM + + Q +DA + V+ I Sbjct: 32 VVGLSGGIDSALVAVLLRRAFGTNMLGVIMPCHSLSEDQ--QDAEKLIELFSIPSTVVDI 89 Query: 356 HDLVNHFFSLMSQFLQEEP---SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + + Q L+E + + NI+ R+R L AL+ ++ TSNK+EI Sbjct: 90 ----TATYDTLVQRLKETNVYINPLALANIKPRLRMTTLYALAQSMGYLVCGTSNKAEIV 145 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 GY T +GD PL DL K +V + +++ LG IP I+ K PSA Sbjct: 146 AGYFTKHGDSGADIWPLGDLLKEEVRETSTF---------LG-----IPEEIVYKPPSAG 191 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQA 532 L QTD+ + D+I +S+I +E + +E GS +KR Sbjct: 192 LWKGQTDEAEMG--LTYDEI--------DSYIATGN-VKEEVRKRIEERYRGSAHKRELP 240 Query: 533 PV 534 PV Sbjct: 241 PV 242 >gi|325680741|ref|ZP_08160279.1| NAD+ synthase [Ruminococcus albus 8] gi|324107521|gb|EGC01799.1| NAD+ synthase [Ruminococcus albus 8] Length = 385 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 50/230 (21%) Query: 283 LRDYVQKNNF--HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 ++DY ++N K +IG+SGG DS++ AA+ V+ALGK+ V +++P Sbjct: 154 IKDYFEENATPETKAVIGISGGKDSSVAAALCVEALGKDRVIGVLMPQ------------ 201 Query: 341 ACAKALGCKYDVLPIHDLVNHF---------FSLMSQFLQEEPSGI-VAE----NIQSRI 386 G ++D+ LVNH S +S L E S + VAE N RI Sbjct: 202 ------GEQFDIDCSKQLVNHLGIKSYEINVGSTVSALLGELGSKLDVAEQARVNTPPRI 255 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R L A++ ++ T N SE VGY T +GD +G F+PL +L +V Sbjct: 256 RMTTLYAVAACVGGRVVNTCNMSEDWVGYSTKFGDSAGDFSPLSELVVREVI-------- 307 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKR 495 + LG IP + K+P L +TD+++L Y LD I++ Sbjct: 308 -AVGDELG-----IPYELTHKTPIDGL-CGKTDEDNLGFTYAELDSYIRQ 350 >gi|271502492|ref|YP_003335518.1| N-carbamoylputrescine amidase [Dickeya dadantii Ech586] gi|270346047|gb|ACZ78812.1| N-carbamoylputrescine amidase [Dickeya dadantii Ech586] Length = 294 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 28/281 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A R +A+ QG +IL ELF + Y PE Sbjct: 1 MTKVTVAATQM-ACTWDLPKNIENAERLVRQAHAQGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + SS I + + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQEL--ETSSLIKHFSALAAELEVVLPLSFFERANNAYYNSLVMIDADGSVLGVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIW-KNSNICKHLKKQGAEFLF- 172 ++PN + EK+ FI G + + R ++G+ IC D W + C LK GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQWFPETARCLALK--GAELIFY 175 Query: 173 --SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD-------ELIFDGASF 221 ++ + P Y + + H + G + +P+I N++G + E+ F G+SF Sbjct: 176 PTAIGSEPAYPDIDSQPHWTRVQQGHAAANLIPVIASNRIGTEASKYLDGLEMTFYGSSF 235 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ---WNYMSD 259 D L Q E + E+ + SQ W D Sbjct: 236 IADQTGALVAQANKTDETVLVHEFDLEAIASQRAAWGLFRD 276 >gi|126667658|ref|ZP_01738627.1| carbon-nitrogen hydrolase family protein [Marinobacter sp. ELB17] gi|126627927|gb|EAZ98555.1| carbon-nitrogen hydrolase family protein [Marinobacter sp. ELB17] Length = 277 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 14/235 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K+++A+AQ+NP + ++ N+A +A QG +L+LF EL +SGY V + Sbjct: 1 MTSKIRVAVAQINPELLEVKHNLALHCDYVAQAREQGAELLLFPELSLSGYQ----VSRN 56 Query: 61 SFIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLP 118 + A + L + + G +V GF + + G + N++ L G ++ ++ KINLP Sbjct: 57 APAIAMHAHDPVLHALAREAVGITVVAGFVEEGRPGELFNAMAYLRDGKVMHIQRKINLP 116 Query: 119 NYSEFHEKRTFISGYSNDPIVFR-DIRLGILICEDIWKNSNICKHLKKQGAEFLFSL--N 175 Y E + F SG + + + + LIC D+W N + Q E L + + Sbjct: 117 TYGGLEEGKWFHSGQDLNIVEIKPGWQATCLICADLW-NPALTHCAMLQRPEILLAPINS 175 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHL---PIIYVNQVGGQDELIFDGASFCFDGQQ 227 AS VT + + P++ N+ G + EL F G S C G + Sbjct: 176 ASGVVSEDFSNEQNWVTNVSFYAMMYGTPVLLANRFGREKELSFWGGS-CILGPK 229 >gi|290992312|ref|XP_002678778.1| predicted protein [Naegleria gruberi] gi|284092392|gb|EFC46034.1| predicted protein [Naegleria gruberi] Length = 712 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 135/609 (22%), Positives = 222/609 (36%), Gaps = 146/609 (23%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK-SFI 63 + +A L+ D GN+ + + + + + +G EL + GY ED + ++ Sbjct: 4 VTLATCNLDQWSLDFTGNLERIKESIKISKEKGARYRCGPELEVCGYGCEDHFLENDTYT 63 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + LKSD D + +G P + N V L I+ +R K+ L N + Sbjct: 64 HSMECLAELLKSDLTDD-ILVDIGMPIMHKSVRYNCRVFLLNRKIVLIRPKLFLANDGNY 122 Query: 124 HEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWKNSN 158 E R F ++G PI D L + CE+++ ++ Sbjct: 123 RETRWFCAWTKRFAIEDFVLPDFMRELTGQRTVPIGDCIISLNDTDLAVETCEELFTPNS 182 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFD 217 +L G E + + + S + KL R +++ + L +Y NQ+G L+FD Sbjct: 183 PNIYLGLDGVEIISNGSGSHHSLRKLHTRIDLIKNATAKNGLVYLYANQLGCDGGRLLFD 242 Query: 218 G-ASFCFDG-----------------------QQQLAFQMKHFSEQNFMTE--------- 244 G A C +G Q AF+ K S +E Sbjct: 243 GCAMICCNGVLLAQGSQFSLKQVEVVTANVDLDQVRAFRNKIASRSVQASESREFPRVRI 302 Query: 245 ------WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 HY Q L + Y EE A AC L DY+++++ + Sbjct: 303 DFTLKISHYSQSLKPTH-----PVDVKYFTTNEEIALGPACYLF--DYLRRSSQGGYFLP 355 Query: 299 LSGGIDS--------ALCAAIAVDALGKEN------------------------------ 320 LSGG DS ++C I D + + N Sbjct: 356 LSGGADSSATATIVGSMCQLIYKDCIEEANSYEEEYNKKIVLKEIRRICSKGDEWIPSSP 415 Query: 321 --VQTIMLPYKY-----TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 + I+ Y +S ++ A A +G + + I +VN L + + Sbjct: 416 KEIANIIFVTCYMGTVNSSNETRNRAKQLASEIGSHHMDIDIDTVVNSMKDLFTTTTGKT 475 Query: 374 PS-------GIVAENIQSRIRGNI------LMALSNHSKA---MLLTTSNKSEISVGYGT 417 PS I +NIQ+R+R + LM S K ++L +SN E GY T Sbjct: 476 PSFEGSAGENIALQNIQARLRMVVSYYFAQLMNWSRDFKPKNLLVLGSSNVDEALRGYFT 535 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-- 475 Y S NP+ + KT + + + + + G L EV L+ P+AEL+P Sbjct: 536 KYDCSSADINPIGSISKTDLKKFLLYASDN---LGYPSLKEV-----LQAKPTAELQPLE 587 Query: 476 -HQTDQESL 483 HQTD+E + Sbjct: 588 SHQTDEEDM 596 >gi|313894060|ref|ZP_07827626.1| NAD+ synthase [Veillonella sp. oral taxon 158 str. F0412] gi|313441624|gb|EFR60050.1| NAD+ synthase [Veillonella sp. oral taxon 158 str. F0412] Length = 255 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 34/240 (14%) Query: 269 LQEEEADYNACVLSLRDYVQKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L+ +A +A + +RDY +N ++G+SGG DS + AA+ +ALG + V +++P Sbjct: 2 LENPQAIKDALIQWIRDYFSQNGPTCSAVVGISGGKDSTIVAALCKEALGADRVVGVLMP 61 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV--------- 378 S ++DA A + LG + + I + +L +Q E +V Sbjct: 62 NGVQS--DIDDAKAVVEHLGIPHITVNIG---AAYEALTQAIVQGEGYDVVTGRNDLSRD 116 Query: 379 -AENIQSRIRGNILMALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 A N R+R L A+ + + A + T N SE VGY T +GD +G F+PL L Sbjct: 117 AAINTPPRLRMATLYAVGQNLPNGARVANTCNGSEDYVGYSTKFGDSAGDFSPLARLVVE 176 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +V Q+ + IP +++K PS L Q+D++ L Y +LD I+ Sbjct: 177 EVRQIGKLLD--------------IPAYLVDKIPSDGLS-GQSDEDKLGFTYAMLDHYIR 221 >gi|15898953|ref|NP_343558.1| amidohydrolase, putative [Sulfolobus solfataricus P2] gi|284175470|ref|ZP_06389439.1| amidohydrolase, putative [Sulfolobus solfataricus 98/2] gi|13815470|gb|AAK42348.1| Amidohydrolase, putative [Sulfolobus solfataricus P2] gi|261603373|gb|ACX92976.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus solfataricus 98/2] Length = 270 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 29/248 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ +AQ+ GD+ N K E ++ D ++F EL ++GY +DL + + Sbjct: 3 IKVELAQIRSYPGDVYRNYKKHLEIIESSS---ADCVIFPELSLTGYIIKDLTY-----E 54 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 A + + +V G RQ ++G+L NS ++ G + + K LP Y F Sbjct: 55 IYKDAEEATQKIAEKVNKCVVFGTIRQVRKGILRNSAAVIINGKLDYIY-KFYLPTYGLF 113 Query: 124 HEKRTFISGYSNDPIV------FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 E+R F G DP+ ++D++ G++ICED W I + L GA+ +F +AS Sbjct: 114 EERRYFQRG---DPLKDLKIFEYKDLKFGVVICEDAWHPEPI-EALSLMGADAIFIPSAS 169 Query: 178 PYYHNKLKKRHEIVTGQISHVH-------LPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 P KL++ I S + + ++ N VG Q+E F G S + Sbjct: 170 P--MRKLRENLAIEESWDSLLKAHSLMNTVWTVFTNVVGSQEEEYFWGGSRVVSPLGDVK 227 Query: 231 FQMKHFSE 238 ++K F E Sbjct: 228 LKLKLFYE 235 >gi|269218892|ref|ZP_06162746.1| glutamine-dependent NAD+ synthetase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212003|gb|EEZ78343.1| glutamine-dependent NAD+ synthetase [Actinomyces sp. oral taxon 848 str. F0332] Length = 729 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 21/275 (7%) Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 AF+ HF+ + + + + ++ ++ +DSA Q+ YN V +L ++ Sbjct: 347 AFRTVHFTLSPTADDIGFMRPVHRFPFVPEDSARLH----QDCYEAYNIQVSALCQRLRA 402 Query: 290 NNFHKVIIGLSGGIDSA---LCAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAK 344 K++IG+SGG+DS + AA A+D LG+ E++ LP TS ++ +A A + Sbjct: 403 IGRPKIVIGVSGGLDSTHALIVAAKAMDKLGRPREDILAYTLPGFATSEKTKANARALGE 462 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAML 402 +LG + + I M EE + EN+Q+ +R + L L+N + ++ Sbjct: 463 SLGVTFSEIDIRPAALQMLKDMGHPFGRGEEVYDVAFENVQAGLRTDYLFRLANANGGIV 522 Query: 403 LTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 L T + SE+++G+ T GD +N + KT + L W S + Sbjct: 523 LGTGDLSELALGWCTFGVGDHMSHYNVNAGVPKTLIQHLVRWVTS---SRQFDDSVAATL 579 Query: 462 PSILEKSPSAELRPH------QTDQESLPPYPILD 490 SIL+ S EL P Q+ Q + PY + D Sbjct: 580 RSILDTEISPELVPAKDGEQIQSTQAVIGPYELQD 614 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 66/127 (51%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 + A L +GD N + E + +G+ + +F EL ++GY EDL+ + + A Sbjct: 14 RTAACTLPVAMGDPRENARRTAELARECSEKGVAVAVFPELGLTGYSIEDLLLQDVLLDA 73 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A++ L++ + + IVVG P + V N ++ G+++ V K LP+Y EF+E Sbjct: 74 TLEALEDLRAASVAIASVIVVGAPLVHRGRVFNCAAVIHRGHVLGVVPKSYLPDYREFYE 133 Query: 126 KRTFISG 132 KR F SG Sbjct: 134 KRHFASG 140 >gi|193215351|ref|YP_001996550.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Chloroherpeton thalassium ATCC 35110] gi|193088828|gb|ACF14103.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chloroherpeton thalassium ATCC 35110] Length = 284 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 25/231 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ IAQ++ V+ + N+ K E A G+++I+F EL ++GY +D + + Sbjct: 3 VKLRIAQIDSVLANFDENLKKHIEHIEAAIADGIEMIVFPELSLTGYNVQDAA-QDIAMP 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L S + + + G + GV NS + G +V KI LP Y F Sbjct: 62 ITDQRLQPL-SKLSEKISILCGGIELSEDFGVYNSAFFFEDGEAKSVHRKIYLPTYGMFE 120 Query: 125 EKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F +G+ R + ++G+ ICED W S H QGA+ +F++ +SP Sbjct: 121 ELRYFSAGHHVRAFNSRKLGKIGVAICEDCWHMSVPYLH-AVQGAKVIFAMMSSPL---- 175 Query: 184 LKKRHEIVTGQI-----------SHVHLPIIYV---NQVGGQDELIFDGAS 220 R ++ TG++ ++ HL +Y+ N+VG +D L + G S Sbjct: 176 ---RVDLQTGELGIARVWEMLNRTYAHLFSVYLVCANRVGNEDSLSYWGNS 223 >gi|282849255|ref|ZP_06258640.1| NAD+ synthetase [Veillonella parvula ATCC 17745] gi|282580959|gb|EFB86357.1| NAD+ synthetase [Veillonella parvula ATCC 17745] Length = 255 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 34/240 (14%) Query: 269 LQEEEADYNACVLSLRDYVQKNNFH-KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L+ +A +A V +RDY +N + ++G+SGG DS + AA+ +ALG + V +++P Sbjct: 2 LENPQATKDALVQWIRDYFGENGPNCSAVVGISGGKDSTIVAALCKEALGADRVVGVLMP 61 Query: 328 YKYTSPQSLEDAAACAKALG---------CKYDVLPIHDLVN-HFFSLMSQFLQEEPSGI 377 S ++DA A LG Y+VL H +V + +++ I Sbjct: 62 NGVQS--DIDDAQAVVNHLGIPHMTVNIGAAYEVL-THAIVQAKGYDVVTGRTDLAKDAI 118 Query: 378 VAENIQSRIRGNILMALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 + N R+R L A+ + + A + T N SE VGY T YGD +G F+PL L Sbjct: 119 I--NTPPRLRMTTLYAVGQNLPNGARVANTCNGSEDYVGYSTKYGDSAGDFSPLAQLVVE 176 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +V Q+ + IP +++K PS L Q+D+ L Y +LD I+ Sbjct: 177 EVRQIGKLLD--------------IPLHLVDKVPSDGLS-GQSDEVKLGFTYAVLDHYIR 221 >gi|307596132|ref|YP_003902449.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vulcanisaeta distributa DSM 14429] gi|307551333|gb|ADN51398.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vulcanisaeta distributa DSM 14429] Length = 297 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/238 (26%), Positives = 115/238 (48%), Gaps = 8/238 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREE-ANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L+I + Q + +GD+ N+ + +A E G DLI+ EL++ GY D+ F+ + Sbjct: 2 LRIHLLQYSSKLGDVEFNLNRLIKAMETLCVGDGADLIVTPELYLPGYMSRDMFFQIAE- 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYS 121 I L + ++VGF ++++ + N+ V + ++AV K +LP+Y Sbjct: 61 PIGGKTITRLVMEARRRNCHVIVGFAERNEDTHVLYNTAVAVGPDGVLAVYRKRHLPSYG 120 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G + P++ D ++GI IC D + + + + +GAE ++A+P Sbjct: 121 VFDEYRYFGIGKGDIPVININDHKVGIAICYDAFY-PEVSRVMMLKGAEVHVYISAAPDM 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 +++ +V + +V +YVN VG D L F G S + + + K++ E Sbjct: 180 -SRIHFETFMVARALENVAY-TVYVNTVGQYDGLGFFGGSHVVNPLGNVLIKAKYYEE 235 >gi|39995757|ref|NP_951708.1| carbon-nitrogen family hydrolase [Geobacter sulfurreducens PCA] gi|39982521|gb|AAR33981.1| hydrolase, carbon-nitrogen family [Geobacter sulfurreducens PCA] gi|298504767|gb|ADI83490.1| hydrolase, carbon-nitrogen family [Geobacter sulfurreducens KN400] Length = 283 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 12/222 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+ P +G +A N R+A E + DL++F EL ++GY +DLV + ++ Sbjct: 5 VALAQIKPKLGCVADNCLMVRQAVERGIDEKADLVVFPELALTGYFLKDLVPDVA-LRLD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + I+ L+ + I VG + N+ + L+ G + V K+ LP Y F E Sbjct: 64 APEINALRELSRH--ISIAVGLVEVSADYRFFNTSLYLEGGEVRHVHRKVYLPTYGLFDE 121 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH---- 181 +R G R R+G+LICED+W S L GA + L++SP Sbjct: 122 QRYLARGEHFRAFDSRFGRMGLLICEDMWHLSAP-YILAMDGATTVICLSSSPGRGLTED 180 Query: 182 ---NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 ++ + + ++Y N+VG +D + F G S Sbjct: 181 DSLGSTIAWQKLTSTTAMFFNCRVLYCNRVGYEDGVNFWGGS 222 >gi|251799110|ref|YP_003013841.1| NAD+ synthetase [Paenibacillus sp. JDR-2] gi|247546736|gb|ACT03755.1| NAD+ synthetase [Paenibacillus sp. JDR-2] Length = 269 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 37/263 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQ---TIMLPYKYTSPQSL 336 L++YV+K+ ++I +SGGIDSA+ + A D L E + T+ + Y + Sbjct: 30 LKEYVKKSGTTGLLIAISGGIDSAVTTGLCKMATDELSAETGREYMTLGVFQPYGEQVDI 89 Query: 337 EDAAACAKALGCKYDV-LPIHDLVNHF-----FSLMSQFLQEEPSGIVAENIQSRIRGNI 390 ED+ A A+A K+ V I + V+ +L + + S N+++R R + Sbjct: 90 EDSYATAEAFQLKHKVETNIGEAVDEIALETEHALKAIGIHRHLSRGGKGNVKARTRMVV 149 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 AL+ +++ T + SE G+ T +GD + PL L K QV QLAS Sbjct: 150 QYALAFDLNLLVVGTDHASEAITGFFTKWGDGAVDITPLSSLNKRQVRQLASV------- 202 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEY 510 LG +P SIL+K+P+A L QTD+ L I+ +E S +E Sbjct: 203 --LG-----VPRSILDKAPTAGLWEGQTDESELG-----------ILYDENSAYLEGKEI 244 Query: 511 NDETVRYVEHLLYGSEYKRRQAP 533 E +E +E+KR P Sbjct: 245 GTEAKAKLEKQYLRTEHKRSPIP 267 >gi|324502040|gb|ADY40900.1| Glutamine-dependent NAD(+) synthetase [Ascaris suum] Length = 784 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 122/588 (20%), Positives = 216/588 (36%), Gaps = 115/588 (19%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+ +++ LN D GN+ + ++ E A+ QG + + EL I GY +D + Sbjct: 81 RKVCVSVCTLNQWALDFTGNLRRIIKSIELAHSQGAKIRVGPELEIPGYGCQDHFHEMDT 140 Query: 63 IQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + TL +S I G P + + N ++ + G ++ +R K+ + Sbjct: 141 EYHSWEVLATLLQSSKKFKEMLIATGMPVRFNTELYNCMIAIQNGEVLLIRPKMKFCDDD 200 Query: 122 EFHEKRTFISG------------YSNDPIVFRD--------IRLGILICEDIWKNSNICK 161 + E R F+ + N + F D + +G +CE++W + + Sbjct: 201 VYRESRYFVRWQRPKEVTDFHLPFINKTVPFGDAVLRMADGVMIGFEMCEELWTSRSPHV 260 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEI---VTGQISHVHLPIIYVNQVGGQ-DELIFD 217 L G + + N S +H K H I V + V +Y N G D + +D Sbjct: 261 DLALHGVDII--CNGSASHHVLGKSAHRINHLVLASTAKVGGIYLYSNLRGCDGDRVYYD 318 Query: 218 G------------------------ASFCFDGQQQLAFQMKHFSEQNFMT------EWHY 247 G AS D Q +F+ K +S + E Sbjct: 319 GMSSIAQNGKLFAQIPQFDLDEVSCASALLDLQDNYSFRSKIYSTMSDAAVTKKYPEVDV 378 Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + + + M S + + L +EE N L +Y++++ + LSGG DSA Sbjct: 379 PNGILEADEMRPTSNAIEPVILSKEEELLNGPPAYLWNYLRRSGMQGFFLPLSGGADSAS 438 Query: 308 CAAI------------------------------------AVDALGKENVQTIMLPYKYT 331 A + + D L K+ T + K + Sbjct: 439 VAVMVRSMCEKVYAAYSDACKDPNHDRAEFKLAGEEINVNSADELCKKVFFTCYMQSKNS 498 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL---------QEEPS-GIVAEN 381 S Q+ A AK + + I + V F ++ S E+P + +N Sbjct: 499 SEQTRTFAQELAKQISSNHLRTEIDETVEAFVAMASSTFGINFSGSPPWEDPRLSLGMQN 558 Query: 382 IQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 +Q+RIR + + + ++L L +SN E VGY T Y + NP+ + Sbjct: 559 VQARIRMVTAYLFAQLALYFNKRPGSLLVLGSSNVDESLVGYVTKYDCSAADLNPIGSMM 618 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVI-PPSILEKSPSAELRPHQTDQ 480 K+ + + + T GL L+++I P E P E +P Q D+ Sbjct: 619 KSDLKAMLRYARD---TMGLTALSQIIDAPPTAELLPRIEGQPPQLDE 663 >gi|254229372|ref|ZP_04922788.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vibrio sp. Ex25] gi|262396828|ref|YP_003288681.1| glutamine amidotransferase chain of NAD synthetase [Vibrio sp. Ex25] gi|151938063|gb|EDN56905.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vibrio sp. Ex25] gi|262340422|gb|ACY54216.1| glutamine amidotransferase chain of NAD synthetase [Vibrio sp. Ex25] Length = 278 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 9/234 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++++AQ+N +GD+ N+ + ++A G L+LF EL ++GY + V + + + Sbjct: 4 LQVSVAQINAQLGDVNANLNTHQDYIKQAAALGSQLLLFPELSLTGYQLQSSVREVAMKR 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + + H ++VGF Q G N++ L G ++AV KINLP Y Sbjct: 64 DDARLKELAQLAPH---MSVIVGFVEQVAPGEYYNAMAWLLGGTVVAVHRKINLPTYGGL 120 Query: 124 HEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E + F SG + + D R +LIC D+W + L + L +N++ + Sbjct: 121 EEGKWFHSGDATTSVSLDDNWRGSVLICADLWNPPLVHCALLDKPEILLAPINSASSIVS 180 Query: 183 K--LKKRHEIVTGQISHV--HLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 K + + +V + V P++ N+ G + E F G S +L Q Sbjct: 181 KDFSNEDNWLVNVKFYAVLYGTPVLMANRYGPEGEAWFWGGSCILSATGELLAQ 234 >gi|302810938|ref|XP_002987159.1| hypothetical protein SELMODRAFT_125463 [Selaginella moellendorffii] gi|300145056|gb|EFJ11735.1| hypothetical protein SELMODRAFT_125463 [Selaginella moellendorffii] Length = 730 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 133/609 (21%), Positives = 217/609 (35%), Gaps = 145/609 (23%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK- 60 ++ +K++ LN D GN+ + + +A G L + EL I+GY +D + Sbjct: 1 MRLVKVSTCSLNQWAMDFEGNLGRINESIRQARAAGSVLRVGPELEITGYGCDDHFLEND 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 + A + L SD GIV +G P N V G I+ +R K L Sbjct: 61 TSAHAWECLAEILSSDLT---YGIVCDIGMPVVSDGVRYNCRVFCLDGKILLIRPKKFLA 117 Query: 119 NYSEFHEKRTFISGYSNDPIV-------------------------FRDIRLGILICEDI 153 N + E R F + ++ ++ F D + + CE++ Sbjct: 118 NDGNYRELRWFAAWQHHNSVIEYKLPEIIWSKTSQKTVTFGDAYVSFLDTAVAVETCEEL 177 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG--- 210 + + L G E + + + S + KL R E++ G +Y NQ G Sbjct: 178 FTPWSPHIGLALNGVEIIVNGSGSHHQLRKLNTRIELMQGATHKAGGVYLYANQQGCDGA 237 Query: 211 ------------QDELIFDGASF----------CFDGQQQLAFQ------MKHFSEQNFM 242 +++ G+ F C D F+ + S+ FM Sbjct: 238 RLYYDGCATVFVNGDMVVQGSQFSLADVEVLTACVDLDAVSTFRGSISSLREQASQHKFM 297 Query: 243 TEWHYDQQLSQWNYMSDDS---------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 D +LS+ DDS Y+P +EE A AC L DY+++ Sbjct: 298 PYVSVDFRLSR----PDDSLLLFPTLPILPRYYLP-EEEIALGPACW--LWDYLRRCGAT 350 Query: 294 KVIIGLSGGIDSALCAAI------------------------------------AVDALG 317 ++ LSGG DS+ AAI + + Sbjct: 351 GYLLPLSGGADSSSVAAIVGSMCQLVIRAIEEGDEQVLNDAIRIGNYENGKVPKSAEEFA 410 Query: 318 KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--- 374 V T+ + + +S Q+L AA A +G + L I +V+ SL + + P Sbjct: 411 NRIVFTVYMGSENSSAQTLNRAAQLASQIGASHMDLKIDKIVSALVSLFTSLTGKVPRYK 470 Query: 375 --SGIVAE-----NIQSRIRGNILMALSN--------HSKAMLLTTSNKSEISVGYGTLY 419 G AE N+Q+RIR I L++ ++L ++N E GY T Y Sbjct: 471 VDGGSTAENLALQNLQARIRMVIAYMLASLLPWVKGKRGFFLVLGSANVDEGLRGYLTKY 530 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---- 475 S NP+ + K + W + L I ++ P+AEL P Sbjct: 531 DCSSADLNPIGGISKQDLRSFLRW--------CVNNLHYPILAEVVSAPPTAELEPIREN 582 Query: 476 -HQTDQESL 483 QTD+E + Sbjct: 583 YSQTDEEDM 591 >gi|251791574|ref|YP_003006295.1| N-carbamoylputrescine amidase [Dickeya zeae Ech1591] gi|247540195|gb|ACT08816.1| N-carbamoylputrescine amidase [Dickeya zeae Ech1591] Length = 294 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 18/256 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A R +A+ QG +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CTWDLPKNIENAERLVRQAHAQGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + A S I + + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQEL--ATSPLIKHFSALAAELEVVLPLSFFERANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIW-KNSNICKHLKKQGAEFLF- 172 ++PN + EK+ FI G + + R ++G+ IC D W + C LK GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQWFPETARCLALK--GAELIFY 175 Query: 173 --SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 ++ + P Y + + H + G + +P+I N++G + DG F G Sbjct: 176 PTAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKYIDGLEMTFYGSSF 235 Query: 229 LAFQMKHFSEQNFMTE 244 +A Q Q T+ Sbjct: 236 IADQTGALVAQANKTD 251 >gi|329121750|ref|ZP_08250367.1| NAD+ synthetase [Dialister micraerophilus DSM 19965] gi|327468220|gb|EGF13706.1| NAD+ synthetase [Dialister micraerophilus DSM 19965] Length = 276 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 30/219 (13%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+G+SGG DSA AA+ V ALGKE V ++LP + ++DA K L K L I Sbjct: 43 IVGISGGKDSATVAALCVKALGKERVIGVLLP--NGEQKDIDDARKTVKLLDIKNITLNI 100 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAE---------NIQSRIRGNILMALSNH--SKAMLLT 404 + ++ + EE I NI R+R L A++ + Sbjct: 101 KKVNESMRDMLEE--SEEMRKISGRNELTEDAKINIIPRLRMTALYAVAQMLPEGGRVAN 158 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T N SE VGY T +GD +G F P+ L +V Q +G E +P I Sbjct: 159 TCNLSEDYVGYSTKFGDSAGDFAPIAGLLVEEVKQ-------------IGKCLE-LPDEI 204 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDD-IIKRIVENEES 502 +EK+PS L +++ Y LD I+ I EN+E+ Sbjct: 205 VEKTPSDGLSGLSDEEKIGFTYKTLDKYILTGICENDET 243 >gi|257054921|ref|YP_003132753.1| putative amidohydrolase [Saccharomonospora viridis DSM 43017] gi|256584793|gb|ACU95926.1| predicted amidohydrolase [Saccharomonospora viridis DSM 43017] Length = 280 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 24/233 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ + +GD+ GN+A A R ++A + DL++F EL ++GY L S I Sbjct: 1 MRVALAQTDCRLGDVEGNLADAERIIKQAAEREADLVVFPELSLTGYALGRLTDNVSDIS 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 H G +V+G + NS + L G ++ K+ LPNY + Sbjct: 61 LWPDDPRLAALSRH--GPDVVIGLLEDGRIRRHNSALYLSNGALVHNHRKLYLPNYLIWE 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ-GAEFLF----------- 172 E++ G R R L+C D W+ + L Q GAE L Sbjct: 119 ERKHASPGQHMRAFDTRHGRFATLVCNDAWQ--PMLPWLAAQDGAELLIVPANSAAKPTG 176 Query: 173 -SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 S + + Y+H+ L T ++ +++VN+VG + + F G S D Sbjct: 177 GSFDPAEYWHDLLT-----FTARMQQCW--VVFVNRVGDEAGVRFWGGSRVLD 222 >gi|15829094|ref|NP_326454.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma pulmonis UAB CTIP] gi|25090788|sp|Q98PU6|NADE_MYCPU RecName: Full=NH(3)-dependent NAD(+) synthetase gi|14090038|emb|CAC13796.1| NH(3)-DEPENDENT NAD(+) SYNTHETASE [Mycoplasma pulmonis] Length = 257 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 20/197 (10%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 VQ+ N VI+G+SGGIDSAL A +A A EN I +P + +D A K Sbjct: 29 VQQANKKGVIVGISGGIDSALVACLAKKAF-PENSLGITMPIGNSMKLDFDDIAKLQKL- 86 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 K +++ I DL + +L + + + NI+ R+R L A++ ++L T Sbjct: 87 -TKLEIINI-DLTLSYDALAKTL--DVKNKLAKANIKPRLRMASLYAMAQEKDYLVLGTD 142 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 N E +GY T YGD P+ L K++V LA + I+E Sbjct: 143 NLDEWYLGYFTKYGDGGVDLLPISYLTKSEVISLAQIYK--------------VDKGIIE 188 Query: 467 KSPSAELRPHQTDQESL 483 K PSA L +Q D++ L Sbjct: 189 KKPSAGLWENQEDEKEL 205 >gi|158521126|ref|YP_001528996.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfococcus oleovorans Hxd3] gi|158509952|gb|ABW66919.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfococcus oleovorans Hxd3] Length = 316 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++AI Q P + D+ N+ + QG L++F EL ++GY L + K+ ++ Sbjct: 1 MRVAICQTKPALLDVQTNLESVIAHIHKCREQGAQLVVFPELALTGYFV-GLQYHKAALR 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S I L + T G VVGF + + NS +I G I+ K+NLPNY F Sbjct: 60 MDSDQIRKLAAATK--GTAAVVGFIEESRSMNFYNSALIAVDGEILFAYRKLNLPNYGAF 117 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 E++ F +G D + + IC D+W Sbjct: 118 EERKFFANGKHIRVFRLNDFNVSVFICNDMW 148 >gi|89893534|ref|YP_517021.1| NAD synthase [Desulfitobacterium hafniense Y51] gi|219666862|ref|YP_002457297.1| NAD+ synthetase [Desulfitobacterium hafniense DCB-2] gi|89332982|dbj|BAE82577.1| NAD synthase [Desulfitobacterium hafniense Y51] gi|219537122|gb|ACL18861.1| NAD+ synthetase [Desulfitobacterium hafniense DCB-2] Length = 255 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 39/272 (14%) Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 +E E N V LR+ VQ+ ++IG+SGG+DSA+ A + A ++ ++LP Sbjct: 5 EELEIRINRAVEWLRERVQEARAQGLVIGVSGGVDSAVVAGLCKRAFPHNSI-GVILPAG 63 Query: 330 YTSPQSLEDAAACAKALGCK---YDVLPIHD--LVNHFFSLMSQ---FLQEEPSGIVAEN 381 ++P EDA +AL K D+ H L + +L +Q F ++ G N Sbjct: 64 -SNPMDREDAWLATEALSLKAVEIDLTQAHQGILASVKKALTAQEYTFEEQLSQG----N 118 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++R+R + L ++N +++ T N E GY T YGD P+ L K +V Sbjct: 119 LKARLRMSTLYTVANSLNYLVVGTDNAPEAYTGYFTKYGDGGVDILPIASLTKAEV---R 175 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 +W G +P I+ + P+A L QTD++ + I D+I R + E Sbjct: 176 AWAAQLG-----------LPEKIVNRVPTAGLWEGQTDEQEM---GITYDLIDRYLLGE- 220 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 +E +E + SE+KR+ P Sbjct: 221 -------GVPEERQEKIEKMHQQSEHKRQLPP 245 >gi|254974416|ref|ZP_05270888.1| NH3-dependent NAD(+) synthetase [Clostridium difficile QCD-66c26] gi|255091807|ref|ZP_05321285.1| NH3-dependent NAD(+) synthetase [Clostridium difficile CIP 107932] gi|255313542|ref|ZP_05355125.1| NH3-dependent NAD(+) synthetase [Clostridium difficile QCD-76w55] gi|255516227|ref|ZP_05383903.1| NH3-dependent NAD(+) synthetase [Clostridium difficile QCD-97b34] gi|255649324|ref|ZP_05396226.1| NH3-dependent NAD(+) synthetase [Clostridium difficile QCD-37x79] gi|260682494|ref|YP_003213779.1| NH3-dependent NAD(+) synthetase [Clostridium difficile CD196] gi|260686093|ref|YP_003217226.1| NH3-dependent NAD(+) synthetase [Clostridium difficile R20291] gi|306519419|ref|ZP_07405766.1| NAD+ synthetase [Clostridium difficile QCD-32g58] gi|260208657|emb|CBA61420.1| NH3-dependent NAD(+) synthetase [Clostridium difficile CD196] gi|260212109|emb|CBE02727.1| NH3-dependent NAD(+) synthetase [Clostridium difficile R20291] Length = 251 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 39/258 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L + V + N +I+G+SGGIDSA+ A + A EN +++ K ++PQ EDA Sbjct: 15 LINKVNEANAKGLIVGVSGGIDSAVVANLIKKAF-PENSMGVIMSIK-SNPQDREDALKV 72 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFL---------QEEPSGIVAENIQSRIRGNILMA 393 + GC + L + DL+ +++ + + E + N+++R+R + + Sbjct: 73 IE--GCDIEYLDL-DLIEPQSAILDMVVGNLKDKHLYRAEYLKMTDANLRARVRMSTIYT 129 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++N+ +++ T N +EI GY T +GD P+ +L K +V++ W G+ L Sbjct: 130 IANNLGYLVVGTDNAAEIHTGYFTKFGDGGVDILPIANLTKGEVYE---WAKELGVHEDL 186 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESFINNDQEYND 512 + K+PSA L QTD++ + Y ++D +++ + + DQE Sbjct: 187 -----------INKAPSAGLWEGQTDEDEMGTTYNMIDAVLEGRL---DEVPKRDQE--- 229 Query: 513 ETVRYVEHLLYGSEYKRR 530 +E L SE+KR+ Sbjct: 230 ----IIERLHRLSEHKRK 243 >gi|241950793|ref|XP_002418119.1| NAD(+) synthase (glutamine-hydrolyzing), putative; glutamine-dependent NAD(+) synthetase, putative [Candida dubliniensis CD36] gi|223641458|emb|CAX43419.1| NAD(+) synthase (glutamine-hydrolyzing), putative [Candida dubliniensis CD36] Length = 714 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 139/594 (23%), Positives = 217/594 (36%), Gaps = 133/594 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + +EA RQG L + EL I GY D + + Sbjct: 5 ITVATCNLNQWALDFEGNRDRILESIKEAKRQGAKLRVGPELEICGYGCLDHFAENDLYR 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI--------- 115 + S+ G + +G P + N +I G I+ +R KI Sbjct: 65 HSWEVYGEILSNPETHGILLDIGIPIIHKSIKYNCRIISYNGKILLIRPKIYLANDGNYR 124 Query: 116 --------NLPNYSEFHEKRTFISGYSNDPIV-FRDI-------RLGILICEDIWKNSNI 159 N P Y E ++ FIS + P V F D RLG CE+++ + Sbjct: 125 EMRYFTGWNRPKYHEEYQLPKFISKITGQPRVPFGDCIVQTLETRLGCETCEELFTPESP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + S + KL R +++T +Y NQ G D L +DG Sbjct: 185 HITMALDGVEIFTNSSGSHHELRKLDTRLKLITEATKKCGGIYLYANQKGCDGDRLYYDG 244 Query: 219 -ASFCFDGQ---QQLAFQMKHFSEQNFMTEW--------------------------HYD 248 AS +G Q F +K + + + D Sbjct: 245 CASIIVNGNVLAQASQFSLKDVEVISATVDLDDVRAYRNQKSASVQAVNQLEKFKVIYTD 304 Query: 249 QQLSQWNYMSDDS------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +LS +Y+ D S Y +EE A AC L DY++++ + LSGG Sbjct: 305 VELSPSDYVFDHSIVPSKPQPIKYHTPEEEIALGPACW--LWDYLRRSKCGGYFLPLSGG 362 Query: 303 IDSALCAAIA-------VDALGKE-----NVQTI-----MLPYK---------YTSPQSL 336 IDS A I V+A+ + ++Q I +P YTS Sbjct: 363 IDSCATAVIVHSMCRLIVEAVPNDDQVLKDIQAITHDDDFVPKTPQDIAQRIFYTSFMGT 422 Query: 337 EDAAACAKA--------LGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SGIV 378 E+++ ++ +G + L + +LV SL ++P + Sbjct: 423 ENSSKETRSRSKELSSKIGSYHVDLNMDNLVTSVVSLFEVATGKKPIFKIFGGSNTENLA 482 Query: 379 AENIQSRIRGNILMALS-------------NHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 +NIQ+R+R M LS N ++L ++N E GY T Y S Sbjct: 483 LQNIQARLR----MVLSYIFAQLLPWTRGKNVPGLLVLGSANVDECLRGYLTKYDCSSAD 538 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + +W I L L E L +P+AEL P D Sbjct: 539 INPIGGISKTDLKRFIAWAE---INFDLPILHE-----FLTVTPTAELEPITKD 584 >gi|288960436|ref|YP_003450776.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] gi|288912744|dbj|BAI74232.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] Length = 348 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 108/270 (40%), Gaps = 86/270 (31%) Query: 275 DYNACVLSLRDYVQKNNFHK-----VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 D A + D +Q+ H +++G+SGGIDS++CA +AV ALG E V I++P K Sbjct: 30 DCAAAAREIEDAIQRIVAHDLRRQGIVLGVSGGIDSSVCATLAVRALGPERVLCILMPEK 89 Query: 330 YTSPQS----------------LEDAAACAKALGC--KYDV------------------- 352 SP+S +E+ +ALGC + D Sbjct: 90 ENSPKSTRLGTLLCAHLGVTPLMENITGPLEALGCYERRDTAIRRLFPEFGPGWKQKIGL 149 Query: 353 ---LPIHDLVNHFFSLMSQFLQEEPSG---------------IVAENIQSRIRGNILMAL 394 L D VN+F E P G + A N++ R+R + Sbjct: 150 AGNLLDADRVNYF-----TLTVESPDGERQTSRMPVDVYLDVVAATNLKQRMRKTVEYTH 204 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 ++ +L T N+ E +G+ GD P+ LYK+QV+Q+A+ LG Sbjct: 205 ADRLNYAVLGTPNRLEYELGFFVRGGDGLADLKPIAHLYKSQVYQMAAH---------LG 255 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLP 484 +P I +SPS TD +LP Sbjct: 256 -----LPAEIQAQSPS-------TDTYTLP 273 >gi|20089905|ref|NP_615980.1| NAD synthetase [Methanosarcina acetivorans C2A] gi|19914860|gb|AAM04460.1| NAD(+) synthase (glutamine-hydrolyzing) [Methanosarcina acetivorans C2A] Length = 341 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 112/281 (39%), Gaps = 71/281 (25%) Query: 270 QEEEADYNACVLSLRDYV--QKNNFHK--VIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 +E D L++R ++ Q + F K ++G+SGGIDSA+ + V LGKE+V ++ Sbjct: 24 EELNKDIENLALNIRGFIKSQISGFKKKGAVLGVSGGIDSAVALTLCVQELGKEHVYGLI 83 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN-----------------------HF 362 LP K ++P S A ++LG Y+ +PI +V H Sbjct: 84 LPEKESAPSSKVLGAEICESLGVAYEEVPISPIVESLNIYEKKEQVIKRACPEYDPAIHK 143 Query: 363 FSLM-SQFLQEEPSG--------------------------IVAENIQSRIRGNILMALS 395 SL+ FL +E I + ++ R R + + Sbjct: 144 TSLIFPDFLDQELLNVPYIRLIKDGETVGKYRLKANDYLELIGLQGVKQRSRMIVQYMYA 203 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + T+NK+E+++G YGD PL D YKTQ++ L N Sbjct: 204 EKMNYAVCGTTNKTEVALGQFVKYGDGGVDLEPLADCYKTQIYALGKHLN---------- 253 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESL---PPYPILDDII 493 I I+ + PSA+ H T E P I+D ++ Sbjct: 254 ----INDEIMRRPPSADTWSHYTTDEEFYWRMPMHIMDQLL 290 >gi|124006841|ref|ZP_01691671.1| NAD+ synthetase [Microscilla marina ATCC 23134] gi|123987522|gb|EAY27231.1| NAD+ synthetase [Microscilla marina ATCC 23134] Length = 329 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 19/167 (11%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD-- 351 K+++GLSGGIDS + +AV A+GK NV + +P + QSL A +AL + Sbjct: 74 KLMLGLSGGIDSTVATYLAVRAVGKANVLAVSMPARPDDFQSLAHAKLVRQALELPTNNE 133 Query: 352 ----VLPIHDLVNHFFSLMSQFLQEE---PSGIVAENIQ---------SRIRGNILMALS 395 ++ I +V +M+Q E +G +A+N + SRIR IL Sbjct: 134 QVPTIVDISPIVQAHREVMNQTHLAELGLNAGHLAQNTEQRFRSGNFGSRIRIAILYDFK 193 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGD-MSGGFNPLKDLYKTQVFQLA 441 + +L T NK+E+ GYGT YG +S F LYK ++++A Sbjct: 194 RAIRGRVLGTGNKTELCQGYGTKYGTPLSYDFGLFNQLYKIDIYEMA 240 >gi|323718946|gb|EGB28096.1| hypothetical protein TMMG_01733 [Mycobacterium tuberculosis CDC1551A] Length = 248 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 19/202 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIVF---RDIRLG----------------ILICEDIWKNSNICKHLKK 165 E+R G + D+ G + ICED++ Sbjct: 132 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKR 187 GA L +L+ SP + + R Sbjct: 192 AGATVLANLSGSPITIGRAEDR 213 >gi|164687571|ref|ZP_02211599.1| hypothetical protein CLOBAR_01212 [Clostridium bartlettii DSM 16795] gi|164603345|gb|EDQ96810.1| hypothetical protein CLOBAR_01212 [Clostridium bartlettii DSM 16795] Length = 250 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 23/218 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ V++ +++G+SGGIDSA+ + A + ++ IM ++P+ EDA Sbjct: 14 LREKVKEAGCKGLVVGVSGGIDSAVVCYLIKKAFPENSIGVIM--SINSNPKDREDALKV 71 Query: 343 AKALGCKYDVL----PIHDLVNHFFSLMSQFLQEEPSGIVA--ENIQSRIRGNILMALSN 396 G Y L P ++N S + + SG A N+++R+R + ++N Sbjct: 72 INGCGIDYIDLDLTKPQEMILNSVTSALKEKDLYSESGFRAADSNLRARVRMCSVYTVAN 131 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++ T N +EI GY T YGD P+ +L K +V+ W + G+ Sbjct: 132 NLGYLVVGTDNAAEIHTGYFTKYGDGGVDLVPIANLTKAEVYD---WARALGVHE----- 183 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDII 493 ++ ++PSA L QTD+ + Y ++D ++ Sbjct: 184 ------DVINRAPSAGLWEGQTDENEMGTTYNMIDKVV 215 >gi|210623589|ref|ZP_03293915.1| hypothetical protein CLOHIR_01865 [Clostridium hiranonis DSM 13275] gi|210153459|gb|EEA84465.1| hypothetical protein CLOHIR_01865 [Clostridium hiranonis DSM 13275] Length = 255 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 37/259 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+D V++ + +I+G+SGGIDSA+ A + A +++ IM ++P DA Sbjct: 19 LQDKVKEAHARGLIVGVSGGIDSAVVAYLIKKACPNDSMGVIM--SIKSNPADRVDAMKV 76 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE--------NIQSRIRGNILMAL 394 G +Y L + + ++ L+E+ G+ E N+++RIR + + + Sbjct: 77 IDGCGIEYMDLELAEPHKLILDTVTDNLKEK--GLFKEEYLRMTDANLRARIRMSTIYTI 134 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +N +++ T N +E+ GY T +GD PL +L K +VF+ W GI L Sbjct: 135 ANDLGYLVVGTDNAAELHTGYFTKHGDGGVDILPLANLTKGEVFE---WAKELGIHEDL- 190 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRIVENEESFINNDQEYNDE 513 + K+PSA L QTD+ + Y +D +++ E E Sbjct: 191 ----------INKAPSAGLWEGQTDENEMGTTYKYIDAVLE----------GRRDEVPAE 230 Query: 514 TVRYVEHLLYGSEYKRRQA 532 + ++ L SE+KR A Sbjct: 231 HLEIIDRLHRNSEHKRHTA 249 >gi|146303499|ref|YP_001190815.1| NAD synthetase [Metallosphaera sedula DSM 5348] gi|145701749|gb|ABP94891.1| NH(3)-dependent NAD(+) synthetase [Metallosphaera sedula DSM 5348] Length = 264 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 27/260 (10%) Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 DY V LRDY++ + ++G+SGGIDSA+ A + A +N +++P T Sbjct: 19 TDY--LVNKLRDYIRDSGKKGGVVGVSGGIDSAVTATLLSRA--TQNFYFLIMPSNSTPQ 74 Query: 334 QSLEDAAACAKALGCK--YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 Q LEDA + L K ++ I ++V +F ++++ ++ NI++R R +L Sbjct: 75 QDLEDALHLTEMLNGKDKRTIISIDNIVENFSNVVNT-----RDKLIVGNIKARTRMILL 129 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A + +++ T +KSE+ +GY T YGD P+ DL+KTQV +L + Sbjct: 130 YAFAQKMDYLVIGTGDKSELLLGYFTKYGDGGVDVLPIGDLFKTQVRKLGEYLK------ 183 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESF-INNDQE 509 +P I+ K S L QT + L Y ++D I+ + + + I ++ Sbjct: 184 --------LPSRIVSKPSSPALWEGQTAEGELGVSYEVVDPILYLLEKGKGDLEITSELG 235 Query: 510 YNDETVRYVEHLLYGSEYKR 529 N VR + ++ S +KR Sbjct: 236 VNLNLVRRIRTMVERSRHKR 255 >gi|261819523|ref|YP_003257629.1| N-carbamoylputrescine amidase [Pectobacterium wasabiae WPP163] gi|261603536|gb|ACX86022.1| N-carbamoylputrescine amidase [Pectobacterium wasabiae WPP163] Length = 294 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 +KK+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MKKVTVAATQMA-CSWDLPKNIENAEKLVRQAHTKGAQVILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQEL--ETSPLIKHFSALAAELNVVLPLSFFERANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L QGAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKIGVGICWDQW-FPETARSLALQGAELIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKYIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|145590572|ref|YP_001152574.1| NAD+ synthetase [Pyrobaculum arsenaticum DSM 13514] gi|145282340|gb|ABP49922.1| NH(3)-dependent NAD(+) synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 267 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%) Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DS + A +A +ALG V +++P +T + ++DA A LG + ++ + + F Sbjct: 44 DSTVAATLAAEALGPHRVLGLVMPSIFTPQEDVKDALEVAGRLGIETRLIDVTPISEAFA 103 Query: 364 SLMSQFLQEEPSGIVAE-NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + F P +A N+ RIR IL +N +++ T ++SE+ +GY T YGD Sbjct: 104 KSIPDF---SPGYRLASGNLLPRIRMTILYYYANRDNRLVMGTGDRSELLLGYFTKYGDG 160 Query: 423 SGGFNPLKDLYKTQVFQLA 441 F P+ LYK QV ++A Sbjct: 161 GADFLPIAPLYKLQVREMA 179 >gi|307128934|ref|YP_003880950.1| putative N-carbamoylputrescine amidase [Dickeya dadantii 3937] gi|306526463|gb|ADM96393.1| putative N-carbamoylputrescine amidase [Dickeya dadantii 3937] Length = 294 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 26/280 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A R +A+ QG +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CTWDLPKNIENAERLVRQAHAQGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + A S I + + + + + NS+V++DA G+++ V K Sbjct: 60 ALAQEL--ATSPLIKHFSALAAELEVVLPLSLFERANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARCLALNGAELIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD-------ELIFDGASFC 222 ++ + P Y + + H + G + +P+I N++G + E+ F G+SF Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKYIDGLEMTFYGSSFI 236 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSD 259 D L Q E + E+ D Q + W D Sbjct: 237 ADQTGALVAQANKTDEAVLVHEFDLDAIAAQRASWGLFRD 276 >gi|50123194|ref|YP_052361.1| putative carbon-nitrogen hydrolase [Pectobacterium atrosepticum SCRI1043] gi|49613720|emb|CAG77171.1| putative carbon-nitrogen hydrolase [Pectobacterium atrosepticum SCRI1043] Length = 294 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 +KK+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MKKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQVILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQEL--ETSPLIKHFSALAAELNVVLPLSFFERANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L QGAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKIGVGICWDQW-FPETARSLALQGAELIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKYIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|118467678|ref|YP_888881.1| NAD synthetase [Mycobacterium smegmatis str. MC2 155] gi|118168965|gb|ABK69861.1| glutamine-dependent NAD+ synthetase [Mycobacterium smegmatis str. MC2 155] Length = 680 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 11/214 (5%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKE-----NVQTIMLPYKY 330 YN V L ++ N+ K+++G+SGG+DS +A A+ +E ++ LP Sbjct: 344 YNIQVSGLEQRLRALNYPKIVLGVSGGLDSTHALIVAARAMDREGRPRSDILAFTLPGFA 403 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRG 388 T ++ +A ++ALG ++ + I + M E+ + EN+Q+ +R Sbjct: 404 TGDRTKNNAVRLSRALGVTFEEIDIKQTAQLMLTEMGHPFGRGEKVYDVTFENVQAGLRT 463 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 + L L+N ++L T + SEI++G+ T GD +N + KT + L W S Sbjct: 464 DYLFRLANQRGGIVLGTGDLSEIALGWSTYGVGDQMSHYNVNGGVPKTLIQHLIRWVISS 523 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 G + + EV+ S+L+ + EL P D+E Sbjct: 524 GEFN--DEVNEVL-QSVLDTEITPELVPTGEDEE 554 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/248 (21%), Positives = 102/248 (41%), Gaps = 25/248 (10%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + + D N R + + G+ + +F EL +SGY ED++ + + +++ Sbjct: 13 RLAACTHHTSLADPPANAESVLRLAQACHDDGVAVAVFPELTLSGYSIEDILLQDTLLES 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ L + T +V+G P + + + N+ V++ G ++ V K LP Y EF+E Sbjct: 73 VQEALTELVAATSVLTPVLVIGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYE 132 Query: 126 KRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKKQ 166 +R +G + + L + ICED++ Sbjct: 133 RRQMAAGDQTRGTIRVAGAEVPFGPDLLFAASDVPGLVLHVEICEDMFVPIPPSAQAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFC 222 GA L +L+ SP + + R + + + YV G+ E L +DG + Sbjct: 193 GATVLANLSGSPITVGRAEDR--CLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMI 250 Query: 223 FDGQQQLA 230 ++ LA Sbjct: 251 WENGNLLA 258 >gi|320533811|ref|ZP_08034401.1| putative NAD(+) synthase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133964|gb|EFW26322.1| putative NAD(+) synthase [Actinomyces sp. oral taxon 171 str. F0337] Length = 512 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 33/268 (12%) Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA-- 306 +++ ++ ++ DD A Q+ YN V +L + K++IG+SGG+DS Sbjct: 142 RRVDRFPFVPDDPARLA----QDCYEAYNIQVAALVQRLGAIGNPKIVIGVSGGLDSTHA 197 Query: 307 -LCAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + AA A+D LG+ ++ I +P TS + +A A LGC ++ L I Sbjct: 198 LIVAARAMDRLGRPRSDIHAITMPGFATSAGTRRNAEDLAVGLGCTFEELDIRATATQML 257 Query: 364 SLMSQFLQEE------PSG--------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + M E P G + EN+Q+ +R + L ++NH ++L T + S Sbjct: 258 TEMGHPYGEYARTGVLPEGASERELYDVTFENVQAGLRTDFLFRIANHRGGIVLGTGDLS 317 Query: 410 EISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E+++G+ T GD + + KT + L W + + T + SIL+ Sbjct: 318 ELALGWCTFGVGDQMAHYGVNAGIPKTLIQHLIRWVVAEKLFDDAVGRTLL---SILDTE 374 Query: 469 PSAELRPH------QTDQESLPPYPILD 490 S EL P Q+ Q + PY + D Sbjct: 375 ISPELVPAEAGGAIQSTQAKIGPYALQD 402 >gi|119719952|ref|YP_920447.1| NAD+ synthetase [Thermofilum pendens Hrk 5] gi|119525072|gb|ABL78444.1| NH(3)-dependent NAD(+) synthetase [Thermofilum pendens Hrk 5] Length = 268 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 25/233 (10%) Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLPIHDLVN 360 DSA+ + ALG EN +++P T + L DA + G + + I +++ Sbjct: 46 DSAVTLLLTARALGPENTYALIMPSSATPEEDLRDAYEVVRIAGLPGGNVETVDIEPILS 105 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + E N+ +R+R IL A + ++++ T +KSE+ +GY T YG Sbjct: 106 RFEESLGPLTRVERG-----NLAARVRMCILHARAYRRNSLVIGTGDKSELLLGYFTKYG 160 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D P+ DLYKTQV +L G+ GL P I K S L P + Sbjct: 161 DGGVDVLPIGDLYKTQVRRL-------GLHLGL-------PERIAFKPSSPRLWPGHVAE 206 Query: 481 ESLP-PYPILDDIIKRIVEN--EESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 E L Y + D I+ + + + S + E V V L SE+KRR Sbjct: 207 EELKLTYEVADKILYLLFDRGVDPSEVPGMLGVGRELVERVLELHRRSEHKRR 259 >gi|220935548|ref|YP_002514447.1| NAD(+) synthase [Thioalkalivibrio sp. HL-EbGR7] gi|219996858|gb|ACL73460.1| NAD(+) synthase [Thioalkalivibrio sp. HL-EbGR7] Length = 334 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 57/224 (25%) Query: 271 EEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 + EA+ +LR+ ++K+ N +II +SGG+DSA+CAA+ V ALG V ++LP + Sbjct: 13 DAEAEVERISAALREILRKDLNRRGLIIAISGGVDSAVCAALCVKALGPGKVFGLLLPER 72 Query: 330 YTSPQSLEDAAACAKALGCKY---DVLPIHDLVNHF------------------------ 362 +S S+ A+ LG +Y D+ P + + + Sbjct: 73 DSSSNSVRLGRMVAEQLGIEYTVEDIAPTLEAIGCYRWRDDAIRSVFPDYDGTWKNKLVI 132 Query: 363 ----------FSLMSQFLQEEPSGIVAE---------------NIQSRIRGNILMALSNH 397 F+L+ Q +P+G +AE N + RIR + ++ Sbjct: 133 QGGQQGQINRFALVVQ----KPNGELAEERLDLKSYLQIVAATNFKQRIRKTLEYFHADR 188 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T N+ E G+ GD S P+ LYKTQV+QLA Sbjct: 189 LNYAVVGTPNRLEYDQGFFVKNGDGSADVKPIAHLYKTQVYQLA 232 >gi|227113232|ref|ZP_03826888.1| putative carbon-nitrogen hydrolase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 294 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 +KK+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MKKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQVILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + + F + NS+V++DA G ++ V K Sbjct: 60 ALAQEL--ETSPLIKHFSALAAELNVVLPLSFFERANNAYYNSLVMIDADGTVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L QGAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKIGVGICWDQW-FPETARSLALQGAELIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKYIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|329947285|ref|ZP_08294552.1| NAD(+) synthase domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328525502|gb|EGF52546.1| NAD(+) synthase domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 800 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 33/268 (12%) Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA-- 306 +++ ++ ++ DD A Q+ YN V +L + K++IG+SGG+DS Sbjct: 430 RRVDRFPFVPDDPARLA----QDCYEAYNIQVAALVQRLGAIGNPKIVIGVSGGLDSTHA 485 Query: 307 -LCAAIAVDALGK--ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + AA A+D LG+ ++ I +P TS + +A A LGC ++ L I Sbjct: 486 LIVAARAMDRLGRPRSDIHAITMPGFATSAGTRRNAEDLAVGLGCTFEELDIRATATQML 545 Query: 364 SLM---------SQFLQEEPSG-----IVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + M + L + SG + EN+Q+ +R + L ++NH ++L T + S Sbjct: 546 TEMGHPYGEYARTGALPDGASGRDLYDVTFENVQAGLRTDFLFRIANHRGGIVLGTGDLS 605 Query: 410 EISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E+++G+ T GD + + KT + L W + + T + SIL+ Sbjct: 606 ELALGWCTFGVGDQMAHYGVNAGIPKTLIQHLIRWVVAEELFDDAVGRTLL---SILDTE 662 Query: 469 PSAELRPH------QTDQESLPPYPILD 490 S EL P Q+ Q + PY + D Sbjct: 663 ISPELVPAGAGGAIQSTQAKIGPYALQD 690 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 39/230 (16%) Query: 37 GMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV 96 G+ L F EL ++GY +DL+ + +AI+TL++ + +VVG P + + + Sbjct: 123 GVCLAAFPELCLTGYAIDDLLLSDVLLSDVLAAIETLRAASVGLLPALVVGAPLRLGDRL 182 Query: 97 LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG----YSNDPIVFRDIRLG------ 146 N +++ G + V K LP Y EF+EKR F G D I +R G Sbjct: 183 YNCALVIQGGRVRGVAPKSYLPTYREFYEKRHFAPGDALPTGVDAIELPGVRDGSDDTET 242 Query: 147 -----------------------ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 + +CED+W GA L +++ SP + Sbjct: 243 AARVPFGANLLFEVDDVPGLTFHVEVCEDMWVPVPPSSLAALAGATVLVNISGSPITVGR 302 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQQQL 229 + R E+++ S L YV GQ E L +DG + ++ + L Sbjct: 303 AEDR-ELLSRSSSARGL-AAYVYAAAGQGESSTDLAWDGQTLVYENGELL 350 >gi|291529433|emb|CBK95019.1| NAD+ synthetase [Eubacterium rectale M104/1] Length = 249 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 30/219 (13%) Query: 283 LRDYVQKNNFH-KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 ++D+ KN ++G+SGG DS + AA+ V ALG + V +MLP S + D+ Sbjct: 17 IKDWFDKNGKDCNAVLGISGGKDSTIAAALCVKALGSDRVIGVMLPDGEQS--DINDSVE 74 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI-----VAENIQSRIRGNILMALSN 396 + LG + + I +L + F Q + GI +NI R R ++ A+ Sbjct: 75 VCRLLGIRNYTINIRS------ALEASFKQLQDCGIEITEQCRQNIAPRERTKMIRAVCQ 128 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + ++ T N SE VGY T+ GD G PL L K++V + LG Sbjct: 129 CNNGRMINTCNYSEDYVGYFTIGGDGDGDVAPLGYLTKSEVCAIGHC---------LG-- 177 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +P ++K+PS L +TD+++ Y LD I+ Sbjct: 178 ---LPSKYVDKTPSDGL-CGKTDEDNFGFTYEQLDAFIR 212 >gi|218679897|ref|ZP_03527794.1| NAD synthetase [Rhizobium etli CIAT 894] Length = 47 Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 31/44 (70%), Positives = 36/44 (81%) Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 TV VEHLLY +EYKRRQ+ G KIT K+FGRDR YPI+N+FRD Sbjct: 3 TVHRVEHLLYLAEYKRRQSAPGVKITKKNFGRDRRYPITNRFRD 46 >gi|302666042|ref|XP_003024624.1| hypothetical protein TRV_01193 [Trichophyton verrucosum HKI 0517] gi|291188689|gb|EFE44013.1| hypothetical protein TRV_01193 [Trichophyton verrucosum HKI 0517] Length = 704 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 126/587 (21%), Positives = 211/587 (35%), Gaps = 129/587 (21%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L D GN + + +A G L + EL I GY D F+ C Sbjct: 7 VATCSLRNWALDFEGNTKRIIESIHKAKAAGATLRVGPELEICGYSCLDHFFEADLYLHC 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + D G + +G P + N +I G I+ +R K+ L N + E Sbjct: 67 WEMLCIILKDRSCDGILLDIGMPVMHRNNRFNCRIICLDGKILLIRPKLWLANDGNYREM 126 Query: 127 RTFI--------------------SGYSNDPI-----VFRDIRLGILICEDIWKNSNICK 161 R FI G + PI D +G+ CE+++ + Sbjct: 127 RHFIPWVGPRHVEEYYLPRMVREIQGTTKVPIGDAVISTADTCVGVETCEELFTPQSPHN 186 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGAS 220 + G E + + + S + KL R ++ + +Y N +G D L FDG++ Sbjct: 187 DMSLNGVEIMANSSGSHHTLRKLDIRVSLIMEAMRKNGGVYLYANHLGCDGDRLYFDGSA 246 Query: 221 F-----CFDGQ-------------------QQLAFQMKHFSEQNFMTEWHYDQQLSQWNY 256 C Q + +++ M Y + ++++ Sbjct: 247 MIIVNGCLVAQGNQFSLDDVDVVTAVVDLEEVRSYRCTPSRGHQAMKAGVYTRVETEFSL 306 Query: 257 MSD--DSASTM---------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 SD D + + Y +EE A C L DY++++ ++ LSGGIDS Sbjct: 307 SSDIGDRDTRLRPSLVIQPRYYSPEEEIALSTGCWLW--DYLRRSGTAGYLVPLSGGIDS 364 Query: 306 ALCAA-------IAVDALGKENVQ-----------TIMLPY------------------K 329 A + +DA+ N Q T+ LP K Sbjct: 365 CATAMTVFSMCQLVIDAIKAGNSQVIKDCKRLADYTMELPKTPQELCNQLFHTVYMGMSK 424 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------GIVA 379 +S ++ A +KA+G + L I ++ +L+ ++L +P ++ Sbjct: 425 QSSKETRGRAQDLSKAIGSYHVDLDIDEVYEAQKNLVVKYLDFDPKFKSQGGTNAENLML 484 Query: 380 ENIQSRIRGNILMALSN---------HSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPL 429 +NIQ+R R + H A+L L ++N E GY T Y S NP+ Sbjct: 485 QNIQARSRMVTAYEFAQMLPTTRKRPHGGALLVLGSANAGEALRGYYTKYDCSSADINPI 544 Query: 430 KDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 L K+ + +W S+ I P S LE +P+AEL P Sbjct: 545 GGLDKSDLKLFIAWAEKSYSI-----PCLR----SFLEATPTAELEP 582 >gi|193213226|ref|YP_001999179.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Chlorobaculum parvum NCIB 8327] gi|193086703|gb|ACF11979.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobaculum parvum NCIB 8327] Length = 286 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 11/225 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K K+ I Q + + + N+ +A E+A R G++ I+F EL ++GY +D + + Sbjct: 3 KAKLRIVQSDCTLANFDENLESHVKAIEQAIRDGVEAIVFPELSLTGYNVQDAA-QDMAM 61 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + L+ + + I G D GV NS + + G +V KI LP Y F Sbjct: 62 HIEDHRLAPLRELSREITV-ICGGIELSDDYGVYNSAFMFEDGIGKSVHRKIYLPTYGMF 120 Query: 124 HEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E R F +G + + R + ++G+ ICED W S + L QGA+ L L +SP + Sbjct: 121 EELRYFSAGRQVEAVPSRRLGKIGVAICEDFWHMS-VPYLLAHQGAKLLLVLMSSPLRLS 179 Query: 183 K-------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + + I + + VN+VG +D + G S Sbjct: 180 PGEGMPSIVSQWQTIASTSAFLFSCYVACVNRVGNEDSFTYWGNS 224 >gi|313892230|ref|ZP_07825823.1| NAD+ synthase [Dialister microaerophilus UPII 345-E] gi|313119368|gb|EFR42567.1| NAD+ synthase [Dialister microaerophilus UPII 345-E] Length = 263 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 97/219 (44%), Gaps = 30/219 (13%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+G+SGG DSA AA+ V ALGKE V ++LP + ++DA K L K L I Sbjct: 30 IVGISGGKDSATVAALCVKALGKERVIGVLLP--NGEQKDIDDARKTVKLLDIKNITLNI 87 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAE---------NIQSRIRGNILMALSN--HSKAMLLT 404 + ++ + EE I NI R+R L A++ + Sbjct: 88 KKVNESMREMLEE--SEEMKRISGRNELTEDAKINITPRLRMTTLYAVAQMFSEGGRVAN 145 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T N SE VGY T +GD +G F P+ L +V Q +G E + I Sbjct: 146 TCNLSEDYVGYSTKFGDSAGDFAPIAGLLVEEVKQ-------------IGKCLE-LTDEI 191 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDD-IIKRIVENEES 502 +EK+PS L +++ Y LD I+ I EN+E+ Sbjct: 192 VEKTPSDGLSGLSDEEKIGFTYKTLDKYILTGICENDET 230 >gi|242241205|ref|YP_002989386.1| N-carbamoylputrescine amidase [Dickeya dadantii Ech703] gi|242133262|gb|ACS87564.1| N-carbamoylputrescine amidase [Dickeya dadantii Ech703] Length = 294 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 28/281 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ QG +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CTWDLPKNIENAEKLVRQAHAQGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S+ I + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQDL--ETSALIKHFAALAKALEVVLPLSFFERANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIW-KNSNICKHLKKQGAEFLF- 172 ++PN + EK+ FI G + + R ++G+ IC D W + C LK GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQWFPETARCLALK--GAELIFY 175 Query: 173 --SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD-------ELIFDGASF 221 ++ + P Y + + H + G + +P+I N++G + E+ F G+SF Sbjct: 176 PTAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKYIDGLEMTFYGSSF 235 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSD 259 D L Q +E + E+ D Q + W D Sbjct: 236 IADQTGALVAQADKTAETVLVHEFDLDAIAAQRASWGLFRD 276 >gi|145350751|ref|XP_001419762.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579994|gb|ABO98055.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 699 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 140/606 (23%), Positives = 217/606 (35%), Gaps = 139/606 (22%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ + +A LN D GN A+ R + A R G + EL GY ED ++ Sbjct: 1 MRVVAVACCALNQWALDFDGNYARIRESILRAKRLGARYRVGPELETCGYGCEDHFHERD 60 Query: 62 FIQACSSAIDTLKSDTH-DGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I L + GA + VG P + N VI+ G I VR K L + Sbjct: 61 TETHAWEVIAKLCEEKELMRGAVVDVGAPATTRGARYNCRVIIVDGAIAFVRPKRALADD 120 Query: 121 SEFHEKRTFIS---------------------------GYSNDPIVFRDIRLGILICEDI 153 + E R F + + + +VF D LG CE++ Sbjct: 121 GNYRESRWFTAWTRANEVEEFTLPESCARFGMDGKTSVAFGDGAVVFDDAGLGCETCEEL 180 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV---TGQISHVHLPIIYVNQVGG 210 W L G E + + + S + KL R ++ +G+ V+L Y NQ G Sbjct: 181 WTPDAPHIALALNGIEIVSNGSGSHHQLRKLDARMNLIKSASGKAGGVYL---YSNQRGC 237 Query: 211 Q-DELIFDGASFCFDGQQQLAFQMKHFSEQN---FMTEWHYDQQLSQ---WNYMSDDSAS 263 L +DG + C ++ Q K F + D+ S + MS +AS Sbjct: 238 DGGRLYYDGCA-CIAVNGEIVAQGKQFDVSDVEVVAATVDLDEVQSHRGAFQSMSVQAAS 296 Query: 264 TMYIPL--------------------------QEEEADYNACVLSLRDYVQKNNFHKVII 297 IP +EE A AC L DY++++ + Sbjct: 297 VKRIPTVRVSGKLCVSENLKVTPKRAISFHAPEEEIALGPACWLW--DYLRRSGASGYFL 354 Query: 298 GLSGGIDSALCAAI-------------AVDALGKENVQ---------------------- 322 LSGG DSA AAI A DA+ ++++ Sbjct: 355 PLSGGADSASTAAIVGSMCQLVTRAASAGDAIVADDIRRVAQLASDVPIPSAEELAKMIF 414 Query: 323 -TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS------ 375 T+ L +S ++ AAA A +G + + I +V + + + P Sbjct: 415 TTVYLGTDNSSAETRARAAALANDIGASHLSVAIDVVVTAVVTFFTTVTGKTPKFKVDGG 474 Query: 376 ----GIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMS 423 + +NIQ+R+R +L + S +L L ++N E GY T Y S Sbjct: 475 SNAENLALQNIQARVRMVLSFLFAQLLPWVRGKSGFLLVLGSANVDEGLRGYMTKYDCSS 534 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS-PSAELRP-----HQ 477 NP+ + K + W + G L EV EK+ P+AEL P Q Sbjct: 535 ADVNPIGGISKADLRSFLRW---GAMNLGYPTLAEV------EKAPPTAELEPIRDDYVQ 585 Query: 478 TDQESL 483 TD+E + Sbjct: 586 TDEEDM 591 >gi|189425288|ref|YP_001952465.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter lovleyi SZ] gi|189421547|gb|ACD95945.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter lovleyi SZ] Length = 282 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 11/223 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +A+ Q+ P +G +A N+A + E+A Q DL + EL ++GY +DLV + + + Sbjct: 3 FSVALLQIKPKLGRVADNLALIQEQVEQAIAQKADLAVLPELALTGYFLKDLVPEVA-LP 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S I LK + I VGF + NS + G + + K+ LP Y F Sbjct: 62 LDSPEIAILKELSQR--ISIAVGFVEVTADFQFYNSAAWFEDGELKHLHRKVYLPTYGLF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP----- 178 E+R G + R+G+L+CED+W S L GA L L++SP Sbjct: 120 DEQRYLGRGDRFRAFDTKFGRVGLLVCEDMWHLSA-PYLLAMDGATTLVCLSSSPGRGVD 178 Query: 179 -YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + T + ++YVN+VG +D + F G S Sbjct: 179 EQTLGTATAWRNLTTSTARFLTCRVVYVNRVGYEDGVGFWGGS 221 >gi|253686559|ref|YP_003015749.1| N-carbamoylputrescine amidase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753137|gb|ACT11213.1| N-carbamoylputrescine amidase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 294 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 16/255 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 +KK+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MKKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQVILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + + F + NS+V++DA G ++ V K Sbjct: 60 ALAQEL--ETSPLIKHFSALAAELNVVLPLSFFERANNAYYNSLVMIDADGAVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L QGAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKIGVGICWDQW-FPETARSLALQGAELIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKYIDGLEMTFYGSSFI 236 Query: 230 AFQMKHFSEQNFMTE 244 A Q Q T+ Sbjct: 237 ADQTGALVAQANKTD 251 >gi|328868022|gb|EGG16403.1| glutamine-dependent NAD(+) synthetase [Dictyostelium fasciculatum] Length = 729 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 128/591 (21%), Positives = 210/591 (35%), Gaps = 133/591 (22%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK- 60 ++ + +A LN D GN+ + + + A +G L EL I GY ED +++ Sbjct: 1 MRLITVATCNLNQWALDFKGNLERIIESIKIAKSKGAIYRLGPELEIPGYGCEDHFYEQD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + + S + LK + VG P + N VIL I+ + K L Sbjct: 61 TMLHSWQSLMALLKDPELTRDIIVDVGMPVLHKNVRYNCRVILSDQRIVMICPKKALAMD 120 Query: 121 SEFHEKRTF--------------------ISGYSN----DPIV-FRDIRLGILICEDIWK 155 + E R F I G + D I+ RD + CE+++ Sbjct: 121 GNYRENRWFTPWLKSRTTEIFPLPKVIADIVGQTTCVIGDAIIATRDTAIANETCEELFL 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-EL 214 ++ + G E + + + S + KLK+R +++T S +Y NQ G L Sbjct: 181 PNSPHIEMGLDGVEMIANGSGSHHQLRKLKQRVDLITSATSKSGGIYLYANQQGCDGGRL 240 Query: 215 IFDGASFCFDGQQQLAFQMKHFS-------------------EQNFMTEWH--------- 246 FDG + +A Q FS +FM+ Sbjct: 241 YFDGCCMIMVNGECVA-QGSQFSLVDVEVITATIDLDEVRSARASFMSRCAQATLTKEFP 299 Query: 247 ---YDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 DQ L+ + + YI EE AC L DY++++ + LSGG Sbjct: 300 RVLCDQHLTTYKGSASQPIPIKYITPAEEIGFGPACWL--WDYLRRSGLGGYFLPLSGGA 357 Query: 304 DSA--------LCAAIAVDALGKENVQTIM-----------------------------L 326 DSA +C + +DA GK N Q I L Sbjct: 358 DSAATAAIVAIMCQLVVLDA-GKGNRQVIADAQRIAGAGPDYIPTNAKEFASRIFYTAYL 416 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SG 376 K +S ++ + AA A +G + + I ++ F S+ Q + +P Sbjct: 417 GTKNSSDETRKRAAEIAADVGAVHKEVDIEEVTTAFGSMFGQVSKNQPRFKVHGGSNREN 476 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLL------------TTSNKSEISVGYGTLYGDMSG 424 + +N+Q+R R M S H ++LL ++N E GY T Y S Sbjct: 477 LALQNVQARSR----MVASYHLASLLLWDHGREGSLLVLGSANCDESLRGYMTKYDCSSA 532 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 NP+ + K + W + + +L +P+AEL P Sbjct: 533 DINPIGGISKNDLRIFIEWASRERNIPSIA--------QVLTATPTAELEP 575 >gi|68466629|ref|XP_722510.1| hypothetical protein CaO19.1460 [Candida albicans SC5314] gi|68466912|ref|XP_722371.1| hypothetical protein CaO19.9035 [Candida albicans SC5314] gi|46444341|gb|EAL03616.1| hypothetical protein CaO19.9035 [Candida albicans SC5314] gi|46444489|gb|EAL03763.1| hypothetical protein CaO19.1460 [Candida albicans SC5314] Length = 714 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 131/594 (22%), Positives = 214/594 (36%), Gaps = 133/594 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + +EA RQG L + EL + GY D + + Sbjct: 5 ITVATCNLNQWALDFEGNRDRIFESIKEAKRQGAKLRVGPELEVCGYGCLDHFAENDLYR 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + S+ G + +G P + N +I G I+ +R KI L N + Sbjct: 65 HSWEVYGEILSNPETHGILLDIGIPIIHKSIKYNCRIISYNGKILLIRPKIYLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSNI 159 E R F I+G + P + + RLG CE+++ + Sbjct: 125 EMRYFTGWNRPKYHEEYQLPKFISKITGQARVPFGDCIVQTLETRLGCETCEELFTPESP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + S + KL R +++T +Y NQ G D L +DG Sbjct: 185 HIAMALDGVEIFTNSSGSHHELRKLDTRLKLITEATKKCGGIYLYANQKGCDGDRLYYDG 244 Query: 219 -ASFCFDG-----------------------------QQQLAFQMKHFSEQNFMTEWHYD 248 AS +G + Q + ++ ++ + D Sbjct: 245 CASIIVNGNVLAQASQFSLKDVEVISATVDLDDVRAYRNQKSASVQAVNQSEKFKVIYTD 304 Query: 249 QQLSQWNYMSDDS------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +LS +Y+ D S Y +EE A AC L DY++++ + LSGG Sbjct: 305 VELSPSDYVFDHSIIPSKPQPIKYHTPEEEIALGPACW--LWDYLRRSKCGGYFLPLSGG 362 Query: 303 IDSALCAAI-------AVDALGKE-----NVQTI-----MLPYK---------YTSPQSL 336 IDS A I V+A+ + ++Q I +P YTS Sbjct: 363 IDSCATAVIVHSMCRLVVEAIPNDEQVLKDIQAITHDEGFVPKTPQDIAQRIFYTSFMGT 422 Query: 337 EDAAA--------CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SGIV 378 E+++ A +G + L + +LV SL ++P + Sbjct: 423 ENSSKETRSRSKELASKIGSYHVDLNMDNLVTSVVSLFEVATGKKPIFKIFGGSNTENLA 482 Query: 379 AENIQSRIRGNILMALS-------------NHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 +NIQ+R+R M LS N ++L ++N E GY T Y S Sbjct: 483 LQNIQARLR----MVLSYLFAQLLPWTRGKNVPGLLVLGSANVDECLRGYLTKYDCSSAD 538 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + +W + I L +P+AEL P D Sbjct: 539 INPIGGISKTDLKRFIAWAEKN--------FDLPILHEFLTATPTAELEPITKD 584 >gi|227327595|ref|ZP_03831619.1| putative carbon-nitrogen hydrolase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 294 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 +KK+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MKKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQVILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + + F + NS+V++DA G ++ V K Sbjct: 60 ALAQEL--ETSPLIKHFSALAAELNVVLPLSFFERANNAYYNSLVMIDADGAVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L QGAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKIGVGICWDQW-FPETARSLALQGAELIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKYIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|70605862|ref|YP_254732.1| NAD synthetase [Sulfolobus acidocaldarius DSM 639] gi|76363258|sp|Q4JCP0|NADE_SULAC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|68566510|gb|AAY79439.1| NH(3)-dependent NAD(+) synthetase [Sulfolobus acidocaldarius DSM 639] Length = 279 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 39/296 (13%) Query: 264 TMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 T+ PL E V ++DY+ + IIGLSGGIDS++ + + A EN Sbjct: 10 TLNFPLVTE-----YLVKRIKDYINNSGKSGGIIGLSGGIDSSVASVLLSKA--TENFHV 62 Query: 324 IMLPYKYTSPQSLEDAAACAK---ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 +++P T + L+ A + A KY ++ I +V+ F + + I++ Sbjct: 63 LLMPSSSTPKEDLDHAFMILRLINATESKYTIINIDPIVDQF-----RLAVKTNDKIISG 117 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 NI++R R +L A + +++ T +KSE+ +GY T YGD PL DLYKTQV L Sbjct: 118 NIKARSRMILLYAFAQKFNYLVVGTGDKSELMLGYFTKYGDGGVDILPLGDLYKTQVRML 177 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDII-----K 494 + LG +P I++K PS L QT + + Y +D I+ + Sbjct: 178 GRY---------LG-----VPEDIVKKPPSPALWEGQTAEGEIGLDYETIDSILYLRFEE 223 Query: 495 RIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 ENE S + N + VR + ++ S++K R P +++ +S D YP Sbjct: 224 MRSENEISALVN---VPIDLVRRIVRMVKISQHK-RLPPEIFRLSGRSINSDWRYP 275 >gi|50365338|ref|YP_053763.1| NH3-dependent NAD+ synthetase [Mesoplasma florum L1] gi|81695657|sp|Q6F0U4|NADE_MESFL RecName: Full=NH(3)-dependent NAD(+) synthetase gi|50363894|gb|AAT75879.1| NH3-dependent NAD+ synthetase [Mesoplasma florum L1] Length = 244 Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 119/268 (44%), Gaps = 43/268 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+K N V+IG+SGGIDSA+ A +A A + + +P +S ++ C Sbjct: 14 IKETVKKANAKGVVIGISGGIDSAVVACLAKKAF-PNDYTAVWMPI-----ESSDEDYKC 67 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS---GIVAENIQSRIRGNILMALSNHSK 399 + L + + I + F + +++ + + N ++R+R L ++ + Sbjct: 68 KQELIDQCGIKAIDVELKETFLSFKKAIKDSTTPEHKLAIANAKARLRMTTLYTVAQTNS 127 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++L T N E +GY T +GD PL L K +V + A LG Sbjct: 128 YLVLGTDNLDEWHIGYFTKFGDGGVDMVPLVHLLKREVREAARI---------LG----- 173 Query: 460 IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETVR-Y 517 +P SI+ ++P+A L QTD+ L Y +D + E NDE V+ Sbjct: 174 VPTSIINRAPTASLWEDQTDESELGITYDQIDAYLA-------------GEINDENVKSR 220 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGR 545 V+HL SE+KR A + K F R Sbjct: 221 VDHLHKISEHKRNGA-----VAPKEFKR 243 >gi|301058197|ref|ZP_07199247.1| hydrolase, carbon-nitrogen family [delta proteobacterium NaphS2] gi|300447699|gb|EFK11414.1| hydrolase, carbon-nitrogen family [delta proteobacterium NaphS2] Length = 319 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 4/151 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AI Q P++ D+ N+ + + E +G +LI+F EL ++GY + + ++ Sbjct: 1 MKVAIVQTAPILLDLQHNLDEVLQKIGEEKEKGAELIVFPELALTGYFVGQR-YHEVALR 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-QEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S I + + T G VVGF + NS ++ GN++ K+NLPNY F Sbjct: 60 MDSPEIQRIVAATR--GTAAVVGFIEESVSMNFYNSALVAVDGNLLFAYRKLNLPNYGVF 117 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 E++ F SG D+ + IC D+W Sbjct: 118 EERKFFSSGKQVPVFRLNDLNFSVFICNDLW 148 >gi|213967719|ref|ZP_03395866.1| hydrolase, carbon-nitrogen family [Pseudomonas syringae pv. tomato T1] gi|301382356|ref|ZP_07230774.1| hydrolase, carbon-nitrogen family protein [Pseudomonas syringae pv. tomato Max13] gi|302062935|ref|ZP_07254476.1| hydrolase, carbon-nitrogen family protein [Pseudomonas syringae pv. tomato K40] gi|302130691|ref|ZP_07256681.1| hydrolase, carbon-nitrogen family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927495|gb|EEB61043.1| hydrolase, carbon-nitrogen family [Pseudomonas syringae pv. tomato T1] Length = 268 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P+ DI+GN+A+ + QG ++++F E+F++GY + Sbjct: 1 MRIALYQCPPLPLDISGNLARLEQQAVSTAAQGANVLIFPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 SA + + G I+ G+P +D + V N+V ++D ++L NY + Sbjct: 61 HDGSAATRIAAIAKANGIAILYGYPERDTDQQVYNAVQLID-------EHGVSLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFSAGADYFPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 +PY + + R H ++Y N G + E+ + G +S C DG + L Sbjct: 173 MAPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGEIRYCGLSSLCAPDGSRPL 224 >gi|227829008|ref|YP_002830788.1| NAD synthetase [Sulfolobus islandicus M.14.25] gi|229586218|ref|YP_002844720.1| NAD synthetase [Sulfolobus islandicus M.16.27] gi|238621203|ref|YP_002916029.1| NAD synthetase [Sulfolobus islandicus M.16.4] gi|227460804|gb|ACP39490.1| NAD+ synthetase [Sulfolobus islandicus M.14.25] gi|228021268|gb|ACP56675.1| NAD+ synthetase [Sulfolobus islandicus M.16.27] gi|238382273|gb|ACR43361.1| NAD+ synthetase [Sulfolobus islandicus M.16.4] Length = 304 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 90/313 (28%), Positives = 146/313 (46%), Gaps = 37/313 (11%) Query: 253 QWNYMSDDSASTMYIPLQEE----------EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +W Y + ++ + I + E EA N V +R+Y++ +N +IG+SGG Sbjct: 10 RWYYTLNICSTNILIMVMHEYIRKSLTIDCEAVTNYIVERIREYLEFSNKKGGVIGVSGG 69 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC--KYDVLPIHDLVN 360 +DSA+ A + A +N +++P T LED+ K L KY ++ I ++V Sbjct: 70 VDSAVTATLLAKA--TDNFFILLMPSSSTPKIDLEDSFEMIKFLNAQNKYKLINIDEIV- 126 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 SL S ++ I+ NI++R+R IL A + +++ T +KSE+ +GY T YG Sbjct: 127 ---SLFSNKIETNNKYIIG-NIKARVRMIILYAYAQMLDYLVVGTGDKSELLLGYFTKYG 182 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D P+ DLYKTQV L G GL P I+ K S L QT + Sbjct: 183 DGGVDVLPIGDLYKTQVRML-------GKCLGL-------PERIVTKPSSPALWEGQTAE 228 Query: 481 ESLP-PYPILDDIIK-RIVE-NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 L Y +D I+ R E E I +T++ V+ L+ S++K R P + Sbjct: 229 GELGIDYETIDSILYLRFDEMRSEDEIVKMLGIPIDTIKKVDRLVKISQHK-RLPPEIFR 287 Query: 538 ITAKSFGRDRLYP 550 ++ ++ D +P Sbjct: 288 LSGRAINSDWRFP 300 >gi|313665420|ref|YP_004047291.1| NAD+ synthetase [Mycoplasma leachii PG50] gi|312949582|gb|ADR24178.1| NAD+ synthetase [Mycoplasma leachii PG50] Length = 245 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 17/194 (8%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K + V++G+SGGIDSA+ A +A A +N T+ +P Y+S + A K Sbjct: 20 VKKAKCNGVVVGISGGIDSAVVANLAKRAF-PDNYLTVWMPI-YSSQLDYDCANELIKTN 77 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 K + + + F + S L E+PS + N ++R+R L ++ K ++L T Sbjct: 78 HLKNIEVNLETSFDAFKNSFSN-LDEKPSLLAISNAKARLRMTTLYTIAQTKKYLVLGTD 136 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 N E +GY T YGD P+ L K++V + A N +P I+ Sbjct: 137 NLDEWHIGYFTKYGDGGVDVVPIIHLLKSEVKKAAKILN--------------VPELIIN 182 Query: 467 KSPSAELRPHQTDQ 480 + P+A L QTD+ Sbjct: 183 RKPTAGLWEGQTDE 196 >gi|317056300|ref|YP_004104767.1| NAD+ synthetase [Ruminococcus albus 7] gi|315448569|gb|ADU22133.1| NAD+ synthetase [Ruminococcus albus 7] Length = 249 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 14/165 (8%) Query: 283 LRDYVQKNNF--HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 +R+Y + N K ++G+SGG DS++ AA+ V+ALGK+ V +++ PQ + Sbjct: 17 IREYFEANATPTTKAVLGISGGKDSSVAAALCVEALGKDRVIGVLM------PQGEQFDI 70 Query: 341 ACAKA----LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 C+K LG K + + V+ + L+ V N RIR + L A++ Sbjct: 71 DCSKKLVSHLGIKSYEINVGSTVSALLGEIGNALEVSEQARV--NTPPRIRMSTLYAVAA 128 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T N SE VGY T +GD +G F+PL +L +V + Sbjct: 129 CVGGRVVNTCNMSEDWVGYSTKFGDAAGDFSPLSELCVREVIAIG 173 >gi|302508613|ref|XP_003016267.1| hypothetical protein ARB_05665 [Arthroderma benhamiae CBS 112371] gi|291179836|gb|EFE35622.1| hypothetical protein ARB_05665 [Arthroderma benhamiae CBS 112371] Length = 704 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 126/587 (21%), Positives = 210/587 (35%), Gaps = 129/587 (21%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L D GN + + +A G L + EL I GY D F+ C Sbjct: 7 VATCSLRNWALDFEGNTKRIIESIHKAKAAGATLRVGPELEICGYSCLDHFFEADLYLHC 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + D G + +G P + N +I G I+ +R K+ L N + E Sbjct: 67 WEMLCIILKDRSCDGILLDIGMPVMHRNNRFNCRIICLDGKILLIRPKLWLANDGNYREM 126 Query: 127 RTFI--------------------SGYSNDPI-----VFRDIRLGILICEDIWKNSNICK 161 R FI G + PI D +G+ CE+++ + Sbjct: 127 RHFIPWVGPRHVEEYYLPRMVREIQGTTKVPIGDAVISTADTCVGVETCEELFTPQSPHN 186 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGAS 220 + G E + + + S + KL R ++ +Y N +G D L FDG++ Sbjct: 187 DMSLNGVEIMANSSGSHHTLRKLDIRVSLIMEATRKNGGVYLYANHLGCDGDRLYFDGSA 246 Query: 221 F-----CFDGQ-------------------QQLAFQMKHFSEQNFMTEWHYDQQLSQWNY 256 C Q + +++ M Y + ++++ Sbjct: 247 MIIVNGCLVAQGNQFSLDDVDVVTAVVDLEEVRSYRCTPSRGHQAMKAGVYTRVETEFSL 306 Query: 257 MSD--DSASTM---------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 SD D + + Y +EE A C L DY++++ ++ LSGGIDS Sbjct: 307 SSDIGDRDTRLRPSPVIQPRYYSPEEEIALSTGCWLW--DYLRRSGTAGYLVPLSGGIDS 364 Query: 306 ALCAA-------IAVDALGKENVQ-----------TIMLP------------------YK 329 A + +DA+ N Q T+ LP K Sbjct: 365 CATAMTVFSMCQLVIDAIKAGNSQVIKDCKRLADYTMELPKTPQELCNQLFHTVYMGMSK 424 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------GIVA 379 +S ++ A +KA+G + L I ++ +L+ ++L +P ++ Sbjct: 425 QSSKETRGRAQDLSKAIGSYHVDLDIDEVYEAQKNLVVKYLDFDPKFKSQGGTNAENLML 484 Query: 380 ENIQSRIRGNILMALSN---------HSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPL 429 +NIQ+R R + H A+L L ++N E GY T Y S NP+ Sbjct: 485 QNIQARSRMVTAYEFAQMLPTTRKRPHGGALLVLGSANAGEALRGYYTKYDCSSADINPI 544 Query: 430 KDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 L K+ + +W S+ I P S LE +P+AEL P Sbjct: 545 GGLDKSDLKLFIAWAEKSYSI-----PCLR----SFLEATPTAELEP 582 >gi|227831746|ref|YP_002833526.1| NAD synthetase [Sulfolobus islandicus L.S.2.15] gi|284999311|ref|YP_003421079.1| NAD+ synthetase [Sulfolobus islandicus L.D.8.5] gi|227458194|gb|ACP36881.1| NAD+ synthetase [Sulfolobus islandicus L.S.2.15] gi|284447207|gb|ADB88709.1| NAD+ synthetase [Sulfolobus islandicus L.D.8.5] Length = 304 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 37/313 (11%) Query: 253 QWNYMSDDSASTMYIPLQEE----------EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +W Y + ++ + I + E EA N V +R+Y++ +N +IG+SGG Sbjct: 10 RWYYTLNICSTNILIMVMHEYIRKSLTIDCEAVTNYIVERIREYLEFSNKKGGVIGVSGG 69 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC--KYDVLPIHDLVN 360 +DSA+ A + A +N +++P T LED+ K L KY ++ I ++V+ Sbjct: 70 VDSAVTATLLAKA--TDNFFILLMPSSSTPKIDLEDSFEMIKFLNAQNKYKLINIDEIVS 127 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + E + V NI++R+R IL A + +++ T +KSE+ +GY T YG Sbjct: 128 LFSNKI-----ETNNKYVIGNIKARVRMIILYAYAQMLDYLVVGTGDKSELLLGYFTKYG 182 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D P+ DLYKTQV L G GL P I+ K S L QT + Sbjct: 183 DGGVDVLPIGDLYKTQVRML-------GKCLGL-------PERIVTKPSSPALWEGQTAE 228 Query: 481 ESLP-PYPILDDIIK-RIVE-NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 L Y +D I+ R E E I +T++ V+ L+ S++K R P + Sbjct: 229 GELGIDYETIDSILYLRFDEMRSEDEIVKMLGIPIDTIKKVDRLVKISQHK-RLPPEIFR 287 Query: 538 ITAKSFGRDRLYP 550 ++ ++ D +P Sbjct: 288 LSGRAINSDWRFP 300 >gi|78187354|ref|YP_375397.1| carbon-nitrogen hydrolase family protein [Chlorobium luteolum DSM 273] gi|78167256|gb|ABB24354.1| carbon-nitrogen hydrolase family protein [Chlorobium luteolum DSM 273] Length = 285 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 11/227 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K + IAQ + + + N+A EEA + G D I F EL ++GY +D + Sbjct: 1 MLKANLHIAQTDCTLANFDENLAHHCLLAEEALKGGADAIAFPELSLTGYNVQDAA-QDI 59 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + +D L+ + + I G ++ GV NS + + G ++ KI LP Y Sbjct: 60 AMHIDDPRLDPLRELSRNITI-ICGGIELSEEYGVYNSAFMFEDGKGRSIHRKIYLPTYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + R + R+G+ ICED W S + L QGA+ + L +SP Sbjct: 119 MFEELRYFSAGQEITVVDSRRLGRIGVAICEDFWHVS-VPYLLAHQGAQLMMVLMSSPLR 177 Query: 181 HNKLKKRHEIVT--GQISHVH-----LPIIYVNQVGGQDELIFDGAS 220 + IVT I+ + + VN+VG +D + G S Sbjct: 178 MSPGAGLPPIVTQWQTIASTYAFLFSTFVCCVNRVGNEDSFTYWGNS 224 >gi|328955314|ref|YP_004372647.1| NAD+ synthetase [Coriobacterium glomerans PW2] gi|328455638|gb|AEB06832.1| NAD+ synthetase [Coriobacterium glomerans PW2] Length = 693 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 28/222 (12%) Query: 45 ELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD 104 EL ++GY +DL ++ I A ++ + + T D +G P + N + Sbjct: 62 ELCLTGYTCQDLFLDRTLIDAAERSLRDILAQTRDLPLLFTIGLPVAHGSALYNCCAVCC 121 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR----------------------D 142 AG ++ + K NLPN+ EF+E R F ++ + R + Sbjct: 122 AGRLLGLSAKRNLPNHGEFYEARWFSPAPADAVLSVRLAGQSAPLGWGLVFCCSDDGMDE 181 Query: 143 IRLGILICEDIW-KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLP 201 + +G+ ICED+W + + +GA + + +AS K R +V+ Q + + Sbjct: 182 VAIGVEICEDLWVADPPSVEMALARGAAVVLNASASDEIIGKADYRSSLVSAQSARLFCA 241 Query: 202 IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +Y + G+ E D F G+ +A + +E + T Sbjct: 242 YVYAD--AGEGESTTD---LVFAGENLIAENGRTIAETDLFT 278 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 68/285 (23%), Positives = 121/285 (42%), Gaps = 31/285 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALG--KENVQTIMLPYKYTSPQSLE 337 L+ + + +++IG+SGG+DS L A A D LG + + + +P T+ ++ Sbjct: 375 LKTRLSHTHAERIVIGVSGGLDSTLALLVCARAFDDLGLARAGIVAVSMPGFGTTGRTKG 434 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 +A A++L + +PI V F + + + EN Q+R R ILM L+N Sbjct: 435 NAERLARSLDATFREIPIDAAVRQHFRDIGH--DARLTDVTYENSQARERTQILMDLANQ 492 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 A+++ T + SE+++G+ T GD + + KT V L + L+ Sbjct: 493 LGALVIGTGDLSELALGWATYNGDHMSMYGVNASVPKTLVRHLVGYVAEASAGEIADTLS 552 Query: 458 EV----IPPSILEKSPSAELRPHQTDQESLPPYPILDDII----------KRIVENE-ES 502 ++ + P +L P + Q +E + PY + D + RI S Sbjct: 553 DILDTPVSPELLPPEPDGAI--AQRTEELVGPYELHDYFLYYLLRFGLSPGRIFRTACRS 610 Query: 503 FINNDQEYNDETV----RYVEHLLYGSEYKRRQAPVGTKITAKSF 543 F D Y+ T+ R + ++KR P G K+ + S Sbjct: 611 F---DGTYDPSTILSWLRVFYRRFFSQQFKRSALPDGPKVGSVSL 652 >gi|218288870|ref|ZP_03493121.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Alicyclobacillus acidocaldarius LAA1] gi|258512083|ref|YP_003185517.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218240959|gb|EED08136.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Alicyclobacillus acidocaldarius LAA1] gi|257478809|gb|ACV59128.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 291 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 30/233 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK----- 59 ++AIAQ P +GD++ N+++ EA R +++F EL ++GY +DL + Sbjct: 6 FRVAIAQFAPKLGDVSANLSRHLDYVNEAKRANAQVLVFPELGLTGYQTQDLTLEVARHV 65 Query: 60 -----KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 + IQA S +D L S + D + G ++ K Sbjct: 66 SHPDIQRLIQA-SRDLDVLFSFVEE-----------TDDCRFFVTAAYASGGRLVHRHRK 113 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 + LP Y F E+R F G + + G+LICED W S+ L QGA ++ Sbjct: 114 LYLPTYGMFDERRYFAPGDRVRTFSAQGGQAGVLICEDAWHLSSPYL-LAVQGASVIYVP 172 Query: 175 NASPYYHNKLKKR--HEIVTGQISHVHLPI-----IYVNQVGGQDELIFDGAS 220 +SP+ + Q+ V+ + ++ N+VG +D + F G S Sbjct: 173 ASSPWRNTMAASDFGSHAFWRQLLQVYAQLCGCFFVFANRVGYEDGVHFYGGS 225 >gi|328955751|ref|YP_004373084.1| hypothetical protein Corgl_1163 [Coriobacterium glomerans PW2] gi|328456075|gb|AEB07269.1| hypothetical protein Corgl_1163 [Coriobacterium glomerans PW2] Length = 666 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 135/577 (23%), Positives = 233/577 (40%), Gaps = 52/577 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLI-----LFTELFISGYPPEDLVFK 59 +KIA+AQ++ +GDI G A+ + A QG L+ LFT + G E F+ Sbjct: 1 MKIALAQIDARLGDIEGICARIEQQAHLAAEQGARLLCTPFPLFTGVNAGGLL-ESPNFE 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAG--NIIAVRDKINL 117 S ++A + L S I P +V LDA + ++D + Sbjct: 60 HSMVRALGELSERLAS------TDITCLVP--------ATVNYLDAPLFELFMLKDGRLI 105 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 P S ++R + P VF D+ G+ I +I + F +NA Sbjct: 106 PTRSMLAQRREAAAPIVWTPPVF-DV-AGVRIAATFDLEHDIEEVPTGCDLVISFQVNAF 163 Query: 178 PYYHNKLKKRHEI----VTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 I V +S + + +V VGG DE+++ G SF D ++ Sbjct: 164 DASDETTAAVAAIERSRVPDVVSRKGVWLAWVAPVGGFDEVVYTGGSFVMDDIGRVVAAA 223 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F E + + H+ + +D E + A +SLRD V+ + Sbjct: 224 PCFEESLLVQDVHHG------TFAIEDEREPSLPGYSRNEWIWGALRISLRDSVRASGRE 277 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV + LS + S+L A+ VDALG NV +++ ++ Q D + A+++ L Sbjct: 278 KVALVLSNDLSSSLLCALCVDALGPRNVIGLIVDLGASASQRDSDERSRAESIRAFARNL 337 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQ--SRIRGNILMALSNHSKAMLLTTSNKSEI 411 I LV + S F ++ S ++ ++ +I G +L ++ + A+ ++ +K++ Sbjct: 338 HIQ-LVER--TGASAFGRDASSSALSGDMMRAGQITGVLLDEVAQQADALAVSPISKTDA 394 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP---------LTEVIPP 462 ++ G P D+Y T + LA RN T G + E++ Sbjct: 395 ALAAPLHAARYEGMVAPFGDVYLTTLEFLAKERNRLAPTIPEGAVNLRAVKQSMAEILVW 454 Query: 463 SILEKSPSAELRPHQTDQ-ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEH 520 ++ E R +L P+ I D +++ V+ F Q E N E V + Sbjct: 455 MVVSNRDHPEYRERMAQVLTALEPHEI-DAVLEAHVDRSCPFEEIPQVEKNPEAVALLLM 513 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + G E RR P+ I+A+SF +R +P S + D Sbjct: 514 FVRGGESARRMLPMAPIISARSF-VERDWPRSLAWSD 549 >gi|224372383|ref|YP_002606755.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nautilia profundicola AmH] gi|223589520|gb|ACM93256.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nautilia profundicola AmH] Length = 246 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 40/271 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+ P + NI K E+ + DL++F EL ++GY +D + + +F Sbjct: 1 MKIALAQIRPKLS--PENINKHIEFIEKTD---ADLVVFPELSMNGYKIKDALLEDAF-- 53 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I+ K+ T +V+G + + + NS + +D N I + +K++LP Y F Sbjct: 54 ----DIEYFKNLTF--SKDVVLGAAIKKEGKIYNSALYID--NEIKIHNKVHLPTYGVFE 105 Query: 125 EKRTFISGYSNDPIVFRDIRLG---ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 E R F SG D D + G + +CED++ I + ++ + + + ASP Sbjct: 106 EGRFFFSG---DEFSLFDTKFGKTCMFVCEDVFSGDAI-NFVSQKKPDLIIVIAASPARE 161 Query: 182 ------------NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L K I++G +++ N+VG +D L F G S + + Q Sbjct: 162 FSDGKLLIEDQWEALLKSMAILSGAY------VLFCNRVGFEDGLGFWGGSRVINPKGQT 215 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD 260 + +F E+ E +++ L+Q ++ D Sbjct: 216 EIKANYFEEELIECELNHNLTLTQKYFLRKD 246 >gi|229583560|ref|YP_002841959.1| NAD synthetase [Sulfolobus islandicus Y.N.15.51] gi|228014276|gb|ACP50037.1| NAD+ synthetase [Sulfolobus islandicus Y.N.15.51] Length = 304 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 37/313 (11%) Query: 253 QWNYMSDDSASTMYIPLQEE----------EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +W Y + ++ + I + E EA N V +R+Y++ +N +IG+SGG Sbjct: 10 RWYYTLNICSTNILIMVMHEYIRKSLTIDCEAVTNYIVERIREYLEFSNKKGGVIGVSGG 69 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC--KYDVLPIHDLVN 360 +DSA+ A + A +N +++P T LED+ K L KY ++ I ++V+ Sbjct: 70 VDSAVTATLLAKA--TDNFFILLMPSSSTPKIDLEDSFEMIKFLNAQNKYKLINIDEIVS 127 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + E + V NI++R+R IL A + +++ T +KSE+ +GY T YG Sbjct: 128 LFSNKI-----ETNNKYVIGNIKARVRMIILYAYAQMLDYLVVGTGDKSELLLGYFTKYG 182 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D P+ DLYKTQV L G GL P I+ K S L QT + Sbjct: 183 DGGVDVLPIGDLYKTQVRML-------GKCLGL-------PERIVTKPSSPALWEGQTAE 228 Query: 481 ESLP-PYPILDDIIK-RIVE-NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 L Y +D I+ R E E I +T++ V+ L+ S++K R P + Sbjct: 229 GELGIDYETIDSILYLRFDEMRSEDEIVKILGIPIDTIKKVDRLVKISQHK-RLPPEIFR 287 Query: 538 ITAKSFGRDRLYP 550 ++ ++ D +P Sbjct: 288 LSGRAINSDWRFP 300 >gi|238881958|gb|EEQ45596.1| hypothetical protein CAWG_03925 [Candida albicans WO-1] Length = 714 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 133/594 (22%), Positives = 213/594 (35%), Gaps = 133/594 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + +EA RQG L + EL + GY D + + Sbjct: 5 ITVATCNLNQWALDFEGNRDRILESIKEAKRQGAKLRVGPELEVCGYGCLDHFAENDIYR 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + S+ G + +G P + N +I G I+ +R KI L N + Sbjct: 65 HSWEVYGEILSNPETHGILLDIGIPIIHKSIKYNCRIISYNGKILLIRPKIYLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSNI 159 E R F I+G + P + + RLG CE+++ + Sbjct: 125 EMRYFTGWNRPKYHEEYQLPKFISKITGQARVPFGDCIVQTLETRLGCETCEELFTPESP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + S + KL R +++T +Y NQ G D L +DG Sbjct: 185 HIAMALDGVEIFTNSSGSHHELRKLDTRLKLITEATKKCGGIYLYANQKGCDGDRLYYDG 244 Query: 219 -ASFCFDGQ---QQLAFQMKHFSEQNFMTEW--------------------------HYD 248 AS +G Q F +K + + + D Sbjct: 245 CASIIVNGNVLAQASQFSLKDVEVISATVDLDDVRAYRNQKSASVQAVNQLEKFKVIYTD 304 Query: 249 QQLSQWNYMSDDS------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +LS +Y+ D S Y +EE A AC L DY++++ + LSGG Sbjct: 305 VELSPSDYVFDHSIVPSKPQPIKYHTPEEEIALGPACW--LWDYLRRSKCGGYFLPLSGG 362 Query: 303 IDSALCAAI-------AVDALGKE-----NVQTI-----MLPYK---------YTSPQSL 336 IDS A I V+A+ + ++Q I +P YTS Sbjct: 363 IDSCATAVIVHSMCRLVVEAIPNDEQVLKDIQAITHDEGFVPKTPQDIAQRIFYTSFMGT 422 Query: 337 EDAAA--------CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SGIV 378 E+++ A +G + L + +LV SL ++P + Sbjct: 423 ENSSKETRSRSKELASKIGSYHVDLNMDNLVTSVVSLFEVATGKKPIFKIFGGSNTENLA 482 Query: 379 AENIQSRIRGNILMALS-------------NHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 +NIQ+R+R M LS N ++L ++N E GY T Y S Sbjct: 483 LQNIQARLR----MVLSYLFAQLLPWTRGKNVPGLLVLGSANVDECLRGYLTKYDCSSAD 538 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + +W + I L +P+AEL P D Sbjct: 539 INPIGGISKTDLKRFIAWAEKN--------FDLPILHEFLTATPTAELEPITKD 584 >gi|194246581|ref|YP_002004220.1| Glutamine-dependent NAD(+) synthetase [Candidatus Phytoplasma mali] gi|193806938|emb|CAP18370.1| Glutamine-dependent NAD(+) synthetase [Candidatus Phytoplasma mali] Length = 598 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 28/189 (14%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 +LF EL +S Y DL FK F++ A++ L ++T G I+ G P + N Sbjct: 39 FVLFPELCLSSYSAGDLFFKTDFLEENIKALEWLINNTSFQGIYIL-GIPLVINALIFNV 97 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISG---YSNDPIVF---------------R 141 VI+ I+ + K +PNY EF+EKR F SG Y + I+ Sbjct: 98 AVIIQNKRILGIVPKKTIPNYKEFNEKRWFQSGKNFYQTEIILLGQKVPFGDILFINKEF 157 Query: 142 DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLP 201 D+ G+ IC+D+W + L GA +F+L++S + K ++R + I+H Sbjct: 158 DLIFGVEICQDLWTIESPSDLLVLNGAHIIFNLSSSVEHIGKTEQR---LMAVINHSR-- 212 Query: 202 IIYVNQVGG 210 Q+GG Sbjct: 213 ----KQIGG 217 >gi|308274990|emb|CBX31589.1| hypothetical protein N47_E51010 [uncultured Desulfobacterium sp.] Length = 304 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 4/154 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q +PV+ DI NI + +G LI+F EL ++GY + K ++ Sbjct: 1 MKVVLYQTSPVLLDIKSNIDDIIDKIHQGREKGAQLIVFPELALTGYFVSK-EYHKVALR 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S I L S T G VVGF + NS ++ G I+ K+NLPNY F Sbjct: 60 LDSKEIKLLASATK--GTAAVVGFIEESPSMNFYNSALVAIDGKIVFASRKLNLPNYGVF 117 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS 157 E++ F SG D + + IC D+W S Sbjct: 118 EERKYFSSGKYIPVFKLFDFTIAVFICNDLWHPS 151 >gi|297569716|ref|YP_003691060.1| NAD+ synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925631|gb|ADH86441.1| NAD+ synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 336 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 83/200 (41%), Gaps = 56/200 (28%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY---D 351 V++ LSGG+DS++CAA+AV ALG V +MLP + +SP SL+ A LG Y D Sbjct: 39 VVVALSGGVDSSVCAALAVRALGAGKVYGLMLPERDSSPLSLKRGKQVADCLGIDYLVED 98 Query: 352 VLPIHDLVN----------------------------------HFFSLMSQFLQEEPSG- 376 + P D + ++F+L+ Q P G Sbjct: 99 IGPTLDSLGCYLRRDEAIRRLFPEYGPGWKSKIAIAGGRDGSFNYFNLVVQ----TPGGE 154 Query: 377 --------------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + A N + R R I ++ ++ T N+ E G+ GD Sbjct: 155 LLEKRMPPREYLQIVAATNFKQRTRKMIEYFHADRLNYAVIGTPNRLEYDQGFFVKNGDG 214 Query: 423 SGGFNPLKDLYKTQVFQLAS 442 + P+ LYKTQV+ LAS Sbjct: 215 AADLKPIAHLYKTQVYALAS 234 >gi|301321354|gb|ADK69997.1| NAD+ synthetase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 245 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 17/194 (8%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K + V++G+SGGIDSA+ A +A A +N T+ +P Y+S + A K Sbjct: 20 VKKAKCNGVVVGISGGIDSAVVANLAKRAF-PDNYLTVWMPI-YSSQLDYDCANELIKTN 77 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 K + + + F + S L E+PS + N ++R+R L + K ++L T Sbjct: 78 HLKNIEVNLETSFDAFKNSFSN-LDEKPSLLAISNAKARLRMTTLYTIGQTKKYLVLGTD 136 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 N E +GY T YGD P+ L K++V + A N +P I+ Sbjct: 137 NLDEWHIGYFTKYGDGGVDVVPIIHLLKSEVKKAAKILN--------------VPELIIN 182 Query: 467 KSPSAELRPHQTDQ 480 + P+A L QTD+ Sbjct: 183 RKPTAGLWEGQTDE 196 >gi|253577610|ref|ZP_04854920.1| NAD+ synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251842980|gb|EES71018.1| NAD+ synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 269 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQ---TIMLPYKYTSPQSL 336 L++ V+ ++I +SGGIDSA+ + A D L +E Q T+ + Y + + Sbjct: 30 LKEQVKAARTTGLLIAISGGIDSAVTTGLCKRATDELTQETGQPYMTLGVFQPYGKQEDI 89 Query: 337 EDAAACAKALGCKYDVLP--------IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 E + AKA G K+ V I V H + Q P G N+++R R Sbjct: 90 EHSYEVAKAFGLKHTVETNIEEAVDEIALEVEHGLKNIGQSRHLSPQG--KGNVKARTRM 147 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + AL+ +++ T + SE G+ T +GD + PL L K QV QLA Sbjct: 148 VMQYALAFELNLLVVGTDHASEAITGFYTKWGDGAVDVTPLSSLNKRQVRQLAVR----- 202 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 LG +P S+++K+P+A L QTD++ L Sbjct: 203 ----LG-----VPQSVIDKAPTAGLWEGQTDEKEL 228 >gi|330985830|gb|EGH83933.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 264 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q +P+ DI+GN+ + + + A QG L++ E+F++GY + Sbjct: 1 MRIALYQCSPLPLDISGNLTRLEKQSQAAAEQGAQLLICPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + V N+V ++D+G L NY + Sbjct: 61 QDGPAASRIAAIAQASGIAILYGYPERGPDQQVYNAVQLIDSGG-------TRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFAAGEDHYPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + ++ R H ++Y N G + + + G +S C DG + L Sbjct: 173 MLPYDFVCEVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLSSLCAPDGSRPL 224 >gi|42560975|ref|NP_975426.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492472|emb|CAE77068.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 255 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 17/194 (8%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K + V++G+SGGIDSA+ A +A A +N T+ +P Y+S + A K Sbjct: 30 VKKAKCNGVVVGISGGIDSAVVANLAKRAF-PDNYLTVWMPI-YSSQLDYDCANELIKTN 87 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 K + + + F + S L E+PS + N ++R+R L + K ++L T Sbjct: 88 HLKNIEVNLETSFDAFKNSFSN-LDEKPSLLAISNAKARLRMTTLYTIGQTKKYLVLGTD 146 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 N E +GY T YGD P+ L K++V + A N +P I+ Sbjct: 147 NLDEWHIGYFTKYGDGGVDVVPIIHLLKSEVKKAAKILN--------------VPELIIN 192 Query: 467 KSPSAELRPHQTDQ 480 + P+A L QTD+ Sbjct: 193 RKPTAGLWEGQTDE 206 >gi|323476122|gb|ADX86728.1| NAD+ synthetase [Sulfolobus islandicus REY15A] Length = 304 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 37/313 (11%) Query: 253 QWNYMSDDSASTMYIPLQEE----------EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +W Y + ++ + I + E EA N V +R+Y++ +N +IG+SGG Sbjct: 10 RWYYTLNICSTNILIMVMHEYIRKSLTIDCEAVTNYIVERIREYLEFSNKKGGVIGVSGG 69 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC--KYDVLPIHDLVN 360 +DSA+ A + A +N +++P T LED+ K L KY ++ I ++V Sbjct: 70 VDSAVTATLLAKA--TDNFFILLMPSSSTPKIDLEDSFEMIKFLNAQNKYKLINIDEIV- 126 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 SL S ++ I+ NI++R+R +L A + +++ T +KSE+ +GY T YG Sbjct: 127 ---SLFSNKIETNNKYIIG-NIKARVRMIVLYAYAQMLDYLVVGTGDKSELLLGYFTKYG 182 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D P+ DLYKTQV L G GL P I+ K S L QT + Sbjct: 183 DGGVDVLPIGDLYKTQVRML-------GKCLGL-------PERIVTKPSSPALWEGQTAE 228 Query: 481 ESLP-PYPILDDIIK-RIVE-NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 L Y +D I+ R E E I +T++ V+ L+ S++K R P + Sbjct: 229 GELGIDYETIDSILYLRFDEMRSEDEIVKMLGIPIDTIKKVDRLVKISQHK-RLPPEIFR 287 Query: 538 ITAKSFGRDRLYP 550 ++ ++ D +P Sbjct: 288 LSGRAINSDWRFP 300 >gi|313681898|ref|YP_004059636.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Sulfuricurvum kujiense DSM 16994] gi|313154758|gb|ADR33436.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfuricurvum kujiense DSM 16994] Length = 252 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 34/231 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q P + N+A A E+N+ D+++F EL +SGY +D +++ ++ Sbjct: 1 MKVALIQSAPKLSR--SNLADVL-ALVESNKSA-DVVVFPELALSGYLLQDKLYEDAWK- 55 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D LK + IV+G D+ V NS + G ++ + K +LP Y F Sbjct: 56 --IDELDDLKKASE--ACDIVIGAALWDEGHVYNSALYFSQGQLLHIHHKNHLPTYGMFE 111 Query: 125 EKRTFISGYSNDPIVFRDIRLG--ILICEDIWKNSNICKHLKKQGAEFLFSLNASPY--- 179 E R F +G N+ I F+ ++ICED+W+ + + + AE ++ L ASP Sbjct: 112 EGRYFSAG--NEIISFQTPHGNAVMVICEDVWRAETMAE-IAASDAEVVYVLAASPARDF 168 Query: 180 ----------YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + LK T +SH + +++VN+VG +D L F G S Sbjct: 169 TEEGISIESQWDALLKS-----TALLSHNY--VVFVNRVGFEDGLGFWGGS 212 >gi|87122610|ref|ZP_01078488.1| probable hydratase [Marinomonas sp. MED121] gi|86162147|gb|EAQ63434.1| probable hydratase [Marinomonas sp. MED121] Length = 290 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 16/237 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VF 58 ++ +K+A Q+ D A NI +A +A++QG +IL ELF + Y +++ F Sbjct: 1 MRNIKVAATQM-VCTWDTANNIQRAEEQVRKAHQQGAQIILLQELFETPYFCQEVDAKHF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 K + + I+ + + + + F D NS+V+LDA G I++ K+++ Sbjct: 60 KLAKPLNGNKFIEHFQGLARELEVALPISFFEIDGNNYFNSIVVLDADGAIVSHYRKVHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ ++EK F G + + R +G+ IC D W + + + +GAE LF + Sbjct: 120 PDAVGYYEKYYFSPGDTGFQVAKTRYADIGVAICWDQWFPES-ARSMVLKGAEMLFYPTA 178 Query: 174 LNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQ----DELIFDGASFCFD 224 + + P N + H +++ G + +P+I N++G + + F G+SF D Sbjct: 179 IGSEPSDANLDSREHWQQVMQGHAAANMVPVIASNRIGEETTSDSSMTFYGSSFIAD 235 >gi|149248444|ref|XP_001528609.1| hypothetical protein LELG_01129 [Lodderomyces elongisporus NRRL YB-4239] gi|146448563|gb|EDK42951.1| hypothetical protein LELG_01129 [Lodderomyces elongisporus NRRL YB-4239] Length = 712 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 129/589 (21%), Positives = 208/589 (35%), Gaps = 125/589 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ EA QG L + EL I GY D + Q Sbjct: 5 VTLATCNLNQWALDFEGNRDRIIQSIVEAKAQGAKLRVGPELEICGYGCLDHFAENDLYQ 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +T G + +G P + N VI G I+ +R K+ L N + Sbjct: 65 HSWEVYGEILKNTETHGIILDIGIPVIHKSIKYNCRVISYNGEILLIRPKLYLANDGNYR 124 Query: 125 EKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F I+G + + I D +LG CE+++ + Sbjct: 125 EMRYFTPWNRPKYYEEHQLPKNISKINGQTRVTFGDCIIETLDTKLGCETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + S + KL R +++T +Y NQ G D L +DG Sbjct: 185 HIAMGLDGVEIFTNSSGSHHELRKLDTRLQLITEATKKCGGVYLYANQRGCDGDRLYYDG 244 Query: 219 ASFCFDGQQQLAFQMKHFSEQN---FMTEWHYDQQLSQWNYM------------------ 257 + C ++ Q FS ++ D S N Sbjct: 245 CA-CIVVNGEVLAQASQFSLKDVEVISATIDLDDVRSYRNQKSAGIQAVNQDKTYKIIEC 303 Query: 258 ------SDDSASTMYIP---------LQEEEADYN-ACVLSLRDYVQKNNFHKVIIGLSG 301 S+D T +P L EEE Y AC L DY++++ + LSG Sbjct: 304 LTELSPSEDVYDTSVVPTRPQKIRYHLPEEEIAYGPACWLW--DYLRRSKCGGYFLPLSG 361 Query: 302 GIDSALCAAIA------------------VDALGKENVQTIMLPYKY------------- 330 GIDS A I V AL ++ T P + Sbjct: 362 GIDSCATATIVHLMCRLVVESKDEQVLQDVRALVRDETFTPATPQELAGKLFCTCFMGTE 421 Query: 331 -TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SGIVA 379 +S ++ A A+ +G + L + +LV+ SL ++P + Sbjct: 422 NSSTETRSRAKELAEKIGAYHVDLNMDNLVSSVVSLFEVATGKKPIFKIFGGSQTENLAL 481 Query: 380 ENIQSRIR---GNILMALSNHSKA------MLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 +NIQ+R+R + L ++ ++L ++N E GY T Y S NP+ Sbjct: 482 QNIQARLRMVLSYLFAQLLPWTRGLPVPGLLVLGSANVDECLRGYLTKYDCSSADINPIG 541 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 + KT + + +W ++ I L +P+AEL P D Sbjct: 542 GISKTDLKRFIAWAETN--------FDMPILHDFLTATPTAELEPITKD 582 >gi|304405283|ref|ZP_07386943.1| NAD+ synthetase [Paenibacillus curdlanolyticus YK9] gi|304346162|gb|EFM11996.1| NAD+ synthetase [Paenibacillus curdlanolyticus YK9] Length = 269 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 26/228 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQ-- 322 P + +A+ V L++YV+K+ ++I +SGGIDSA+ A + A D L E+ + Sbjct: 15 PTIDPDAEIRKRVDFLKEYVKKSGTTGLLIAISGGIDSAVAAGLCKQATDELSAESGREY 74 Query: 323 -TIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHF-----FSLMSQFLQEEPS 375 T+ + YT + D+ A A A + V I + V+ SL + + S Sbjct: 75 ITLGVFQPYTEQVDISDSYAVADAFKLTHRVETNIGETVDEIALEVEHSLKAIGISRHLS 134 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 N+++R R + A++ +++ T + SE G+ T +GD + PL L K Sbjct: 135 RGGKGNVKARTRMVMQYAIAFDMNLLVVGTDHASEAITGFYTKWGDGAVDITPLSSLNKR 194 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 QV Q+A + LG +P S+L+K+P+A L QTD+ L Sbjct: 195 QVRQVA---------AKLG-----VPQSVLDKAPTAGLWEGQTDEAEL 228 >gi|327307634|ref|XP_003238508.1| glutamine dependent NAD+ synthetase [Trichophyton rubrum CBS 118892] gi|326458764|gb|EGD84217.1| glutamine dependent NAD+ synthetase [Trichophyton rubrum CBS 118892] Length = 704 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 125/587 (21%), Positives = 209/587 (35%), Gaps = 129/587 (21%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L D GN + + +A G L + EL I GY D F+ C Sbjct: 7 VATCSLRNWALDFEGNTNRIIESIHKAKAAGATLRVGPELEICGYSCLDHFFEADLYLHC 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + D G + +G P + N +I G I+ +R K+ L N + E Sbjct: 67 WEMLCIILKDRSCDGILLDIGMPVMHRNNRFNCRIICLDGKILLIRPKLWLANDGNYREM 126 Query: 127 RTFI--------------------SGYSNDPI-----VFRDIRLGILICEDIWKNSNICK 161 R FI G + PI D +G+ CE+++ + Sbjct: 127 RHFIPWVGPRHVEEYYLPRMVREIQGTTKVPIGDAVISTADTCVGMETCEELFTPQSPHN 186 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGAS 220 + G E + + + S + KL R ++ +Y N +G D L FDG++ Sbjct: 187 DMSLNGVEIMANSSGSHHTLRKLDIRVSLIMEATRKNGGVYLYANHLGCDGDRLYFDGSA 246 Query: 221 F-----CFDGQ-------------------QQLAFQMKHFSEQNFMTEWHYDQQLSQWNY 256 C Q + +++ M Y + ++++ Sbjct: 247 MIIVNGCLVAQGNQFTLDDVDVVTAVVDLEEVRSYRCTPSRGHQAMKAGVYTRVETEFSL 306 Query: 257 MSD--DSASTM---------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 SD D + + Y +EE A C L DY++++ ++ LSGGIDS Sbjct: 307 SSDIGDRDTRLRPSPVIQPRYYSPEEEIALSTGCWLW--DYLRRSGTAGYLVPLSGGIDS 364 Query: 306 ALCAA-------IAVDALGKENVQ-----------TIMLPY------------------K 329 A + +DA+ N Q T+ LP K Sbjct: 365 CATAMTVFSMCQLVIDAIKAGNSQVIKDCKRLADYTLELPKTPQELCNQVLHTVYMGMSK 424 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------GIVA 379 +S ++ A +KA+G + L I ++ +L+ ++L +P ++ Sbjct: 425 QSSKETRGRAQDLSKAIGSYHVDLDIDEVYEAQKNLIVKYLNFDPKFKSQGGTNAENLML 484 Query: 380 ENIQSRIRGNILMALSN---------HSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPL 429 +NIQ+R R + H A+L L ++N E GY T Y S NP+ Sbjct: 485 QNIQARSRMVTAYEFAQMLPTTRKRPHGGALLVLGSANAGEALRGYYTKYDCSSADINPI 544 Query: 430 KDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 L K+ + +W S+ I G LE +P+AEL P Sbjct: 545 GGLDKSDLKLFIAWAEKSYSIPCLRG---------FLEATPTAELEP 582 >gi|296533094|ref|ZP_06895730.1| NAD synthetase [Roseomonas cervicalis ATCC 49957] gi|296266575|gb|EFH12564.1| NAD synthetase [Roseomonas cervicalis ATCC 49957] Length = 678 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 20/231 (8%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALGKENVQTI--MLPYKY 330 YN V L Q K+IIG+SGG+DS + AA A+D +G+ I +P Sbjct: 341 YNIQVAGLVQRCQATRNRKIIIGVSGGLDSTQALIVAAHAMDVMGRPRSDIIAYTMPGFG 400 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS-LMSQFLQEEPS-GIVAENIQSRIRG 388 TS + +A A +LG L I + L F Q EP + EN+Q+ +R Sbjct: 401 TSAGTKTNAHALMASLGVTAHELDIRPAARQMLADLGHPFAQGEPVYDVTFENVQAGLRT 460 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 + L +N M+L T + SE+++G+ T GD +N + KT + L W Sbjct: 461 DYLFRAANRHGGMVLGTGDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVIQS 520 Query: 448 G-ITSGLGPLTEVIPPSILEKSPSAELRPH-------QTDQESLPPYPILD 490 G ++ +G + +ILE S EL P Q+ + + PY + D Sbjct: 521 GQFSAEVGATLQ----AILETEISPELIPADGEGQALQSTEAKIGPYALQD 567 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 25/148 (16%) Query: 27 RRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVV 86 RRA E QG L++F EL +SGY +DL+ + + + A A+ T+ ++ ++V Sbjct: 38 RRAHE----QGAALVVFPELGLSGYAIDDLLLQDTLLDAVQQALATMLVESAGLRPLLLV 93 Query: 87 GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-------------- 132 G P + Q + N V + G ++ V K +LPNY EF+E R F SG Sbjct: 94 GAPLRHQGRLYNCAVAMQGGRVLGVTPKQHLPNYREFYEHRHFASGQGMAGSIRLLGQEV 153 Query: 133 -YSNDPIVFRDIRLGIL-----ICEDIW 154 + D +++R L L ICED W Sbjct: 154 PFGGD-LIYRAEDLPGLTIHAEICEDFW 180 >gi|15898952|ref|NP_343557.1| NAD synthetase [Sulfolobus solfataricus P2] gi|284175471|ref|ZP_06389440.1| NAD synthetase [Sulfolobus solfataricus 98/2] gi|13815469|gb|AAK42347.1| NH(3+) dependent NAD(+) synthetase (nadE) [Sulfolobus solfataricus P2] gi|261603372|gb|ACX92975.1| NAD+ synthetase [Sulfolobus solfataricus 98/2] Length = 304 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 34/254 (13%) Query: 253 QWNYMSDDSASTMYIPLQEE----------EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +W Y + ++ + I + E EA N V +R+Y++ +N +IG+SGG Sbjct: 10 RWYYTLNICSTNILIMVMHEYIRKSLTIDCEAVTNYIVERIREYLEFSNKKGGVIGVSGG 69 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC--KYDVLPIHDLVN 360 +DSA+ A + A +N +++P T L+D+ K L KY ++ I ++V Sbjct: 70 VDSAVTATLLAKA--TDNFFILLMPSSSTPKIDLDDSFEMIKFLNAQNKYKLINIDEIVK 127 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S ++ E I+ NI++R+R IL A + +++ T +KSE+ +GY T YG Sbjct: 128 SF----SNKIETENKYIIG-NIKARVRMIILYAYAQMLDYLVVGTGDKSELLLGYFTKYG 182 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D P+ DLYKTQV L G GL P I+ K S L QT + Sbjct: 183 DGGVDVLPIGDLYKTQVRML-------GKCLGL-------PERIVTKPSSPALWEGQTAE 228 Query: 481 ESLP-PYPILDDII 493 L Y +D I+ Sbjct: 229 GELGIDYETIDSIL 242 >gi|73667818|ref|YP_303833.1| NAD synthetase [Methanosarcina barkeri str. Fusaro] gi|72394980|gb|AAZ69253.1| NH(3)-dependent NAD(+) synthetase [Methanosarcina barkeri str. Fusaro] Length = 330 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 79/331 (23%), Positives = 130/331 (39%), Gaps = 82/331 (24%) Query: 269 LQEEEADYNACVLSLRDYV--QKNNFHK--VIIGLSGGIDSALCAAIAVDALGKENVQTI 324 ++E + L LR ++ Q +F K V+IG+SGGIDSA+ + V LGKE V + Sbjct: 12 IEELNGNIGNIALKLRGFIRDQVASFKKKGVVIGVSGGIDSAVILTLCVQELGKEKVYGL 71 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPI-----------------------HDLVNH 361 +LP + ++P S A ++LG Y+ +PI +D H Sbjct: 72 LLPEEESAPSSKALGAEICESLGVSYEEVPISPILRSLNIYDKKEQIIKRTCPEYDARIH 131 Query: 362 FFSL-MSQFLQE-----------EPSGIVA---------------ENIQSRIRGNILMAL 394 SL + FL + IVA + ++ R R + Sbjct: 132 KTSLALPDFLNTGLLNVPYIHLVKNGEIVARHRLKANDYLELIGLQGVKQRSRMLVQYMC 191 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + T+NK+E+ +G YGD PL D YK QV+ L N Sbjct: 192 AETMNYAVCGTTNKTEMVLGQFVKYGDGGVDLEPLSDCYKVQVYALGKLLN--------- 242 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESL---PPYPILDDIIK--------RIVENEESF 503 + I+++ PSA+ H T E P I+D ++ +++E Sbjct: 243 -----VNEEIIKRPPSADTWNHYTTDEEFYWRMPIQIMDQLLYAQEHQLPLQVIEKNTGL 297 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 +E ++ R++ + +EY R PV Sbjct: 298 ---PRETIEKVQRHISRIKDTTEYIRAAPPV 325 >gi|323718945|gb|EGB28095.1| hypothetical protein TMMG_01732 [Mycobacterium tuberculosis CDC1551A] Length = 456 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 16/228 (7%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKE-----NVQTIMLPYKY 330 YN V L ++ ++ KV+IG+SGG+DS +A A+ +E ++ LP Sbjct: 121 YNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFA 180 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRG 388 T + +A A+ALG + + I D + + E+ + EN+Q+ +R Sbjct: 181 TGEHTKNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRT 240 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 + L ++N ++L T + SE+++G+ T GD +N + KT + L W S Sbjct: 241 DYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISA 300 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPH-----QTDQESLPPYPILD 490 G G + S+L+ + EL P Q+ + + P+ + D Sbjct: 301 G---EFGEKVGEVLQSVLDTEITPELIPTGEEELQSSEAKVGPFALQD 345 >gi|296537046|ref|ZP_06899032.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296262627|gb|EFH09266.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 238 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 11/153 (7%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKR----TFISGYSNDPIVFRDIRLGILICEDI 153 VV+L G ++ R + FH F G + P+VFR RLG++ + Sbjct: 38 QGVVLLGEGRVLTRRAR------HLFHPAEPGAGVFTPGPAPGPMVFRSCRLGVMSGAEA 91 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 + I + L + GAE L L+ +PY + ++ LP++ V+ +G Sbjct: 92 -TDPAIAETLAETGAELLLHLSGAPYLREAEDAAVDAAVPRVVETGLPMLGVSPLGAWGA 150 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWH 246 I+ G +F ++L ++ F+ +TEW Sbjct: 151 RIWAGGAFALGADRRLLARLPRFAGTPLVTEWE 183 >gi|28867746|ref|NP_790365.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. tomato str. DC3000] gi|28850981|gb|AAO54060.1| hydrolase, carbon-nitrogen family [Pseudomonas syringae pv. tomato str. DC3000] gi|331015071|gb|EGH95127.1| hydrolase, carbon-nitrogen family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 268 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P+ DI+GN+A+ + A QG ++++ E+F++GY + Sbjct: 1 MRIALYQCPPLPLDISGNLARLEQQAVSAAAQGANVLICPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 SA + + G I+ G+P +D + V N+V ++D ++L NY + Sbjct: 61 HDGSAATRIAAIAKANGIAILYGYPERDTDQQVYNAVQLID-------EHGVSLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFSAGADYFPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 +PY + + R H ++Y N G + E+ + G +S C DG + L Sbjct: 173 MAPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGEIRYCGLSSLCAPDGSRPL 224 >gi|288560686|ref|YP_003424172.1| NAD+ synthetase NadE [Methanobrevibacter ruminantium M1] gi|288543396|gb|ADC47280.1| NAD+ synthetase NadE [Methanobrevibacter ruminantium M1] Length = 204 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 30/228 (13%) Query: 307 LCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 + AA+ +ALGK+ V +++P S ++ A L K+ ++ I D V+ S M Sbjct: 1 MVAALCTEALGKDRVIGVLMPNGVQS--DIDYAKLLVSHLDIKHYIINIRDAVDGVLSQM 58 Query: 367 SQFLQEEPSGI-VAE----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 ++ SGI ++E N+ RIR + L A+S + + N SE VGY T YGD Sbjct: 59 TK------SGIEISEQTRINLPPRIRMSTLYAISQSNNGRVANNCNLSEDWVGYATRYGD 112 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 +G F+PL +L ++V ++ N +P I++K P L Q+D+E Sbjct: 113 GAGDFSPLSNLTVSEVKEIGRSLN--------------LPSEIVDKVPIDGL-SDQSDEE 157 Query: 482 SLP-PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYK 528 L Y +LD I R E E+ +Y + ++ L+ EYK Sbjct: 158 KLGFTYDVLDKYI-RTGEIEDKTTKERIDYLHDLNKFKLELMPSFEYK 204 >gi|281412243|ref|YP_003346322.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermotoga naphthophila RKU-10] gi|281373346|gb|ADA66908.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermotoga naphthophila RKU-10] Length = 267 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 5/172 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A Q+ P +GD GN+ + R EEA +G ++I+F EL ISGY ++ V K+ + Sbjct: 1 MRVAAVQMLPAIGDFEGNLERIERFTEEAVLEGAEVIVFPELTISGYTWDETVLKRGALF 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A L + +G I VG PR + NS+VI + DK +L Sbjct: 61 FSEVAKKRLLKLSREGQILIAVGTPRIVLGKLRNSLVIFKKKKELLFYDKTHLFR----G 116 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 EK F G +R + G LIC +I I + L +G++ + S A Sbjct: 117 EKGVFEPGEYFLVFSYRGVVFGTLICYEI-GFPEISRILTFKGSKVILSAFA 167 >gi|326478376|gb|EGE02386.1| glutamine-dependent NAD(+) synthetase [Trichophyton equinum CBS 127.97] Length = 831 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 125/587 (21%), Positives = 209/587 (35%), Gaps = 129/587 (21%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L D GN + + +A G L + EL I GY D F+ C Sbjct: 7 VATCSLRNWALDFEGNTKRIIESIHKAKAAGATLRVGPELEICGYSCLDHFFEADLYLHC 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + D G + +G P + N +I G I+ +R K+ L N + E Sbjct: 67 WEMLCIILKDRSCDGILLDIGMPVMHRNNRFNCRIICLDGKILLIRPKLWLANDGNYREM 126 Query: 127 RTFISGYSND-------PIVFRDIR------------------LGILICEDIWKNSNICK 161 R FI + P + R+I+ +G+ CE+++ + Sbjct: 127 RHFIPWVAPRHVEEYYLPRMVREIQGTTKVPIGDAVISTADTCIGVETCEELFTPQSPHN 186 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGAS 220 + G E + + + S + KL R ++ +Y N +G D L FDG++ Sbjct: 187 DMSLNGVEIMANSSGSHHTLRKLDVRVSLIMEATRKNGGVYLYANHLGCDGDRLYFDGSA 246 Query: 221 FCFDGQQQLA------------------------FQMKHFSEQNFMTEWHYDQQLSQWNY 256 +A ++ M Y + ++++ Sbjct: 247 MIIVNGNLVAQGNQFTLDDVDVVTAVVDLEEVRSYRCTPSRGHQAMKAGVYTRVETEFSL 306 Query: 257 MSD--DSASTM---------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 SD D + + Y +EE A C L DY++++ ++ LSGGIDS Sbjct: 307 SSDIGDRDTRLRPSPVIQPRYYSPEEEIALSTGCWLW--DYLRRSGTAGYLVPLSGGIDS 364 Query: 306 ALCAA-------IAVDALGKENVQ-----------TIMLP------------------YK 329 A + +DA+ N Q T+ LP K Sbjct: 365 CATAMTVFSMCQLVIDAINAGNSQVIKDCKRLADYTLELPKTPQELCNQVFHTIYMGMSK 424 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------GIVA 379 +S ++ A +KA+G + L I ++ +L+ ++L +P ++ Sbjct: 425 QSSKETRGRAQDLSKAIGSYHVDLDIDEVYEAQKNLVVKYLDFDPKFKSQGGTNAENLML 484 Query: 380 ENIQSRIR-------GNILMALSN--HSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPL 429 +NIQ+R R IL H A+L L ++N E GY T Y S NP+ Sbjct: 485 QNIQARSRMVTAYEFAQILPTTRKRPHGGALLVLGSANAGEALRGYYTKYDCSSADINPI 544 Query: 430 KDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 L K + +W S+ I G LE +P+AEL P Sbjct: 545 GGLDKRDLKLFIAWAEKSYSIPCLRG---------FLEATPTAELEP 582 >gi|91225729|ref|ZP_01260758.1| hypothetical glutamine-dependent NAD(+) synthetase [Vibrio alginolyticus 12G01] gi|269968443|ref|ZP_06182458.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91189618|gb|EAS75893.1| hypothetical glutamine-dependent NAD(+) synthetase [Vibrio alginolyticus 12G01] gi|269826942|gb|EEZ81261.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 278 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 9/234 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++++AQ+N +GD+ N+ + ++A G L+LF EL ++GY + V ++ ++ Sbjct: 4 LQVSVAQINAQLGDVNANLNTHQDYIKQAAAIGSQLLLFPELSLTGYQLQSSV-REVAMK 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + L ++VGF Q G N++ L G ++AV K+NLP Y Sbjct: 63 RDDARLKELAQLAPQ--MSVIVGFVEQAAPGEYYNAMAWLLGGTVVAVHRKVNLPTYGGL 120 Query: 124 HEKRTFISGYSNDPIVF-RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E + F SG + + + R +LIC D+W + L + L +N++ + Sbjct: 121 EEGKWFHSGEATTSVCLDENWRGSVLICADLWNPPLVHCALLDKPEILLAPINSASSIVS 180 Query: 183 K--LKKRHEIVTGQISHV--HLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 K + + +V + V P++ N+ G + E F G S +L Q Sbjct: 181 KDFSNEDNWLVNVKFYAVLYGTPVLMANRYGPEGEAWFWGGSCILSPTGELLAQ 234 >gi|25090784|sp|Q97WN9|NADE_SULSO RecName: Full=NH(3)-dependent NAD(+) synthetase Length = 278 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 24/224 (10%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 EA N V +R+Y++ +N +IG+SGG+DSA+ A + A +N +++P T Sbjct: 14 EAVTNYIVERIREYLEFSNKKGGVIGVSGGVDSAVTATLLAKA--TDNFFILLMPSSSTP 71 Query: 333 PQSLEDAAACAKALGC--KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 L+D+ K L KY ++ I ++V F S ++ E I+ NI++R+R I Sbjct: 72 KIDLDDSFEMIKFLNAQNKYKLINIDEIVKSF----SNKIETENKYIIG-NIKARVRMII 126 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L A + +++ T +KSE+ +GY T YGD P+ DLYKTQV L G Sbjct: 127 LYAYAQMLDYLVVGTGDKSELLLGYFTKYGDGGVDVLPIGDLYKTQVRML-------GKC 179 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDII 493 GL P I+ K S L QT + L Y +D I+ Sbjct: 180 LGL-------PERIVTKPSSPALWEGQTAEGELGIDYETIDSIL 216 >gi|312143485|ref|YP_003994931.1| NAD+ synthetase [Halanaerobium sp. 'sapolanicus'] gi|311904136|gb|ADQ14577.1| NAD+ synthetase [Halanaerobium sp. 'sapolanicus'] Length = 260 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 28/213 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V+++ ++GLSGGIDS+L + + A +N ++LP + ++ Q DA A Sbjct: 21 IKNKVKESGSDGAVVGLSGGIDSSLTSLLCKKAF-PDNTLGLILPCQ-SNEQDQIDAIAH 78 Query: 343 AKALGCKYDVLPIH------------DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A+ Y ++ + D ++ F + + ++ + N++ R+R Sbjct: 79 AEKFEIDYKIIDLKNTYQEFVKSLNLDNLDRFSTSIKNINGDQKLKLALANVKPRLRMAY 138 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L +N + +++ T N+SE+ +GY T +GD PL +L KT+V + A+ N Sbjct: 139 LYFYANLNNYLVVGTDNRSELKLGYFTKFGDGGIDLAPLANLTKTEVRKTAAELN----- 193 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 I I+ K+PSA L Q D+ L Sbjct: 194 ---------IADKIINKAPSAGLWEEQKDETEL 217 >gi|311746307|ref|ZP_07720092.1| glycosyl hydrolase, family 10 [Algoriphagus sp. PR1] gi|126576542|gb|EAZ80820.1| glycosyl hydrolase, family 10 [Algoriphagus sp. PR1] Length = 300 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 34/281 (12%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKK 60 K +K+ + QL+ D+A N+ K EA +G +++ ELF S Y ED K Sbjct: 13 KTVKVGLVQLS-CSSDVAENMTKTIAGVREAAAKGAQVVVLQELFRSLYFCDVEDYENFK 71 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLP 118 + ++L S + G IV + EG+ N+ +LDA G + K+++P Sbjct: 72 LAEAIPGPSTESLGSLAKELGVVIVASLFEKRAEGLYHNTTAVLDADGAYLGKYRKMHIP 131 Query: 119 NYSEFHEKRTFISG---YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + + EK F G Y P F +I G+LIC D W + +GA+FL Sbjct: 132 DDPGYFEKFYFTPGDLGYKVFPTKFGNI--GVLICWDQW-YPEAARITALKGADFLVYPT 188 Query: 176 ASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 A ++ ++ +++ H + G +P++ VN+ G + ++ F G SF Sbjct: 189 AIGWHKDQDGLTNDEQYGAWQTIQRSHAVANG------IPVVSVNRCGIEGDMKFWGGSF 242 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHY---DQQLSQWNYMSD 259 + ++ F+ H EQ + E + D+ + W ++ D Sbjct: 243 VANPFGRVIFKASHEEEQIHVEELDFASSDRYRTHWPFLRD 283 >gi|331703434|ref|YP_004400121.1| NH(3) dependent NAD(+) synthetase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801989|emb|CBW54143.1| NH(3) dependent NAD(+) synthetase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 245 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 35/203 (17%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K V++G+SGGIDSA+ A +A A +N T+ +P Y+S + Sbjct: 20 VKKAKCDGVVVGISGGIDSAVVANLAKLAF-PDNYLTVWMPI-YSSQLDYD--------- 68 Query: 347 GCKYDVLPIHDLVNHFFSLMSQF---------LQEEPSGIVAENIQSRIRGNILMALSNH 397 C +++ + L N +L + F L E+PS + N ++R+R L ++ Sbjct: 69 -CANELIKTNQLKNIEVNLEASFDAFKNSFSNLDEKPSLLAISNAKARLRMTTLYTIAQT 127 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 K ++L T N E +GY T YGD P+ L K++V + A N Sbjct: 128 KKYLVLGTDNLDEWHIGYFTKYGDGGVDVVPIIHLLKSEVKKAAQILN------------ 175 Query: 458 EVIPPSILEKSPSAELRPHQTDQ 480 +P I+ + P+A L QTD+ Sbjct: 176 --VPEIIINRKPTAGLWEGQTDE 196 >gi|195043669|ref|XP_001991665.1| GH11939 [Drosophila grimshawi] gi|193901423|gb|EDW00290.1| GH11939 [Drosophila grimshawi] Length = 785 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 129/598 (21%), Positives = 227/598 (37%), Gaps = 132/598 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK- 59 M +K+ +A+ LN D GN+A+ ++ EA G EL + GY ED + Sbjct: 1 MGRKITVAVTTLNQWALDFEGNMARIMQSILEAKDMGASYRTGPELEVCGYSCEDHFLEP 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +F+ + + ++ + S + + VG P Q N V+ ++ +R K+ + + Sbjct: 61 DTFLHSWETLLEIMMSPFCENML-VDVGMPVMHQNVAYNCRVVFFNRQLLLIRPKMAMCD 119 Query: 120 YSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIW 154 + E R F + + + I RD +G ICE++W Sbjct: 120 DGNYRESRWFTAWTKALQVEDYYLPRLVTQHTGQETVPFGDAVIATRDTCIGYEICEELW 179 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH---EIVTGQISHVHLPIIYVNQVGGQ 211 + KH++ A +N S Y +L+K H +++ ++ N G Sbjct: 180 NVRS--KHIEMSLAGVEIIVNGSGSYM-ELRKAHITNDLIRNASFKAGGAYLFSNLRGCD 236 Query: 212 DELI-FDGAS-FCFDGQ-----QQLAFQMKHFSEQNFMTE-------------------- 244 + + F+G S +G+ +Q A Q + E Sbjct: 237 GQRVYFNGCSAIALNGEILARGKQFALQDVEVTLATIDLEEIRSYRVSLRSRCSIAAGAL 296 Query: 245 ----WHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKNNFHKVII 297 D ++S N + S + + +P +EE A AC L DY++++ + Sbjct: 297 AYPRIRCDFEMSTHNDIFKTSTAPIQVPSHTPEEEIALGPACW--LWDYLRRSGQGGYFL 354 Query: 298 GLSGGIDSALCAAI----------AV---DALGKENVQTIMLPYKYT------------- 331 LSGG+DS+ A I AV DA +++ I+ YT Sbjct: 355 PLSGGVDSSSSATIVHSMCRQIVHAVQLGDAQVLYDIRKILADTDYTPDNPAALCNRLLV 414 Query: 332 ---------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-------- 374 S ++ A+ A LG + + I VN + + P Sbjct: 415 TCFMGSVNSSKETRRRASQLASQLGSYHIEISIDSAVNALLGIFNAVTGLTPVFRTQGGC 474 Query: 375 --SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSG 424 + +NIQSRIR +++ + N +L L ++N E GY T Y S Sbjct: 475 ARQNLALQNIQSRIRMVLAYIFAQLMLWVRNRPGGLLVLGSANVDESLRGYMTKYDCSSA 534 Query: 425 GFNPLKDLYKTQVFQ-LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 NP+ + K+ + + LA ++ + + P+ E SI+E P+AEL P Q + E Sbjct: 535 DINPIGGISKSDLRRFLAYAKDKYNL-----PVLE----SIIEAPPTAELEPLQENGE 583 >gi|268537146|ref|XP_002633709.1| Hypothetical protein CBG03392 [Caenorhabditis briggsae] gi|187036616|emb|CAP24293.1| CBR-QNS-1 protein [Caenorhabditis briggsae AF16] Length = 703 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 124/603 (20%), Positives = 230/603 (38%), Gaps = 134/603 (22%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++ ++A +N D GN + + EA G + L EL I GY D F+ Sbjct: 6 RRCRVATCTVNNWALDFRGNYERIVKTCSEAYALGARIRLGPELEIPGYGCADHFFELDT 65 Query: 63 IQACSSAIDTLKSDTHDGGAGIVV-GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + L + + +V+ G P + + + N L G ++ +R K+ L + + Sbjct: 66 ERHSWEMLSKLVEKSKEWPELLVITGLPTRFRGLLYNCAAALKNGKLLFIRAKMGLADDN 125 Query: 122 EFHEKRTFISG----------------YSNDPIVFRD--------IRLGILICEDIWKNS 157 + E R F+ + + F D R+G ICE++W + Sbjct: 126 VYRESRWFVKWTETFKHYEMPLNSQIHFEQSTVPFGDGILESSDNARVGFEICEELWSSR 185 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 + L +QG + + + + S + K R ++++ G + V +Y N G D + Sbjct: 186 STNIRLAEQGVDIICNGSGSHHILGKSNYRINQLILGSSAKVGGVYLYANHRGCDGDRVY 245 Query: 216 FDGASFC------------FD-------------GQQQLAFQMK-----HFSEQNFMTEW 245 +DGAS FD + + QMK + S+Q + Sbjct: 246 YDGASSIAQNGDLLAQIHQFDIEDTCVATAIVDLSENSVFRQMKSSDRGNASDQKTVVPI 305 Query: 246 HYDQQLSQWNYMSDDSASTM-------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 +D +++ ++ M P+ E A L Y++++ I Sbjct: 306 RFDGNMAEGVKFNEKCTERMTNVEDLQLSPIAELCYGPPA---YLWTYLRRSGMAGYFIP 362 Query: 299 LSGGIDSALCAAIA-----------------------------------VDALGKENVQT 323 LSGG DS+ AA+ V L + + T Sbjct: 363 LSGGQDSSAVAAMVRLMCEKVCGAVKKRRETDGGDDPAYYLGGKKVTEDVAELCNQVLFT 422 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL-------MSQFLQEEPSG 376 + +++S ++ + A A+ + + + I +V+ + M F + Sbjct: 423 CYMASEHSSDETRQCAEGLARNVNSNHCGIFIDTVVSSILKVFKVAYGFMPSFQNSDNRE 482 Query: 377 IVA-ENIQSRIRGNIL-----MALSNHSKA---MLLTTSNKSEISVGYGTLYGDMSGGFN 427 I+A +NIQ+RIR + +AL +H + ++L T+N E VGY T Y S N Sbjct: 483 IMALQNIQARIRMVLAYLFAQLALVSHKRPGGLLVLGTANVDESLVGYLTKYDCSSADIN 542 Query: 428 PLKDLYKTQVFQ-LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 P+ + K + Q L + +G+T+ S+++ +P+AELRP QTD+ Sbjct: 543 PIGSVSKRDLRQFLEIAHDKYGMTA---------LRSVIDSTPTAELRPLVDGKVSQTDE 593 Query: 481 ESL 483 + Sbjct: 594 AEI 596 >gi|310790665|gb|EFQ26198.1| carbon-nitrogen hydrolase [Glomerella graminicola M1.001] Length = 718 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 129/582 (22%), Positives = 212/582 (36%), Gaps = 126/582 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN A+ + ++A G L + EL I GY D + ++ Sbjct: 5 VTVATCSLNQWALDWEGNAARIVESIQKAKAAGARLRVGPELEICGYGCLDHLLEQDLYL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + D G + +G P Q + N ++ G I+ +R K+ L N + Sbjct: 65 HCFEMLRRILLDETCHGILLDIGMPVQHRNQRFNCRILCLDGKILMIRPKMWLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSN----DPIVFR-DIRLGILICEDIWKNSNI 159 E R F I G ++ D +V D G CE+++ + Sbjct: 125 EMRHFTPWMHPRQTEQYHLPRIIQEIQGATHVVFGDAVVSTPDTCFGAETCEELFTPNAP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + + S + KL R +++T +Y NQ G D L +DG Sbjct: 185 HIAMSLDGVEIITNSSGSHFTLQKLDTRLKLITEATRKCGGIYLYANQQGCDGDRLYYDG 244 Query: 219 ASFCFDGQQQLAFQMKHFS--------------------------EQNFMTEWHYDQQLS 252 ++ + +A Q FS Q ++ Y++ + Sbjct: 245 SAMILVNGEVVA-QGSQFSLNDVEVITATVDLEEVRAYRSAISRGLQAARSDAKYERIQT 303 Query: 253 QWNYMSDDS-ASTMYIP----------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + S+D A M P ++EE A C L DY++++ ++ LSG Sbjct: 304 PFELSSEDEDADIMITPSPPIKPKFYSVEEEIALCAGCYLW--DYLRRSGTAGYLVPLSG 361 Query: 302 GIDSALC---AAIAVDALGKENVQTI-------------MLPYKYTSPQSL--------- 336 GIDS++ I + A+ + N Q I +LP +PQ+L Sbjct: 362 GIDSSIVFSMCRIVIKAVEEGNAQVIEDVKRLAKYDGEGVLP---KTPQALCNQIFSTIY 418 Query: 337 ------------EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-----SGIVA 379 + A A+A+G + L I D+ N SL L EP G Sbjct: 419 MGMKTQSSAETRQRAKDLAEAIGSYHINLDIDDVYNAQKSLAVSALNFEPRFKVEGGTQQ 478 Query: 380 EN-----IQSRIR-------GNILMALSNH---SKAMLLTTSNKSEISVGYGTLYGDMSG 424 EN IQ+RIR G +L ++L ++N E GY T Y S Sbjct: 479 ENLTLQCIQARIRMVTAYEFGQLLPTARGRPGGGGLLVLGSANVGESLRGYFTKYDCSSA 538 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NP+ + K + + +W L +P + LE Sbjct: 539 DINPIGSIDKADLKRFIAWAEKDFNIPCLHDFLTAVPTAELE 580 >gi|171920921|ref|ZP_02932070.1| NAD+ synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178973|ref|ZP_02964730.1| NAD+ synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188518288|ref|ZP_03003811.1| NAD+ synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524348|ref|ZP_03004380.1| NAD+ synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867810|ref|ZP_03079810.1| NAD+ synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273839|ref|ZP_03206373.1| NAD+ synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554252|ref|YP_002284895.1| NAD+ synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550867|ref|ZP_03771816.1| NAD+ synthetase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551276|ref|ZP_03772222.1| NAD+ synthetase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903148|gb|EDT49437.1| NAD+ synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209254|gb|EDU06297.1| NAD+ synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188998217|gb|EDU67314.1| NAD+ synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659725|gb|EDX53105.1| NAD+ synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660507|gb|EDX53764.1| NAD+ synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249594|gb|EDY74376.1| NAD+ synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541753|gb|ACI59982.1| NAD+ synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379091|gb|EEH01456.1| NAD+ synthetase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225380021|gb|EEH02383.1| NAD+ synthetase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 255 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 22/195 (11%) Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 Q NN +I+G+SGG+DSAL AI D L KE I + +L+ C L Sbjct: 24 QTNN---IILGISGGVDSALTLAILND-LKKEYALNIYAYFLDIHNSNLD--YECVSELK 77 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 Y + I +LV+ + S ++ V N++ +IR N L A++N + ++++ N Sbjct: 78 KVYPNIEIINLVDIYNSYRLLINKKTNDNYVLYNLKPKIRTNYLYAMANAYRGVVVSNLN 137 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 E +G+ T +GD + ++ L L K +++L ++ + +P IL + Sbjct: 138 YDEYILGFFTKHGDSAADYHMLIGLLKKHIYELGAYYS--------------LPTKILNR 183 Query: 468 --SPSAELRPHQTDQ 480 +PS E HQTD+ Sbjct: 184 APTPSNEDDEHQTDE 198 >gi|323478845|gb|ADX84083.1| NAD+ synthetase [Sulfolobus islandicus HVE10/4] Length = 304 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 34/254 (13%) Query: 253 QWNYMSDDSASTMYIPLQEE----------EADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +W Y + ++ + I + E EA N V +R+Y++ +N +IG+SGG Sbjct: 10 RWYYTLNICSTNILIMVMHEYIRKSLTIDCEAVTNYIVERIREYLEFSNKKGGVIGVSGG 69 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC--KYDVLPIHDLVN 360 +DSA+ A + A +N +++P T LED+ K L KY ++ I ++V Sbjct: 70 VDSAVTATLLAKA--TDNFFILLMPSSSTPKIDLEDSFEMIKFLNAQNKYKLINIDEIV- 126 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 SL S ++ I+ NI++R+R +L A + +++ T +KSE+ +GY T YG Sbjct: 127 ---SLFSNKIETNNKYIIG-NIKARVRMIVLYAYAQMLDYLVVGTGDKSELLLGYFTKYG 182 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D P+ DLYKTQV L G GL P I+ K S L QT + Sbjct: 183 DGGVDVLPIGDLYKTQVRML-------GKCLGL-------PERIVTKPSSPALWEGQTAE 228 Query: 481 ESLP-PYPILDDII 493 L Y +D I+ Sbjct: 229 GELGIDYETIDSIL 242 >gi|195447994|ref|XP_002071462.1| GK25126 [Drosophila willistoni] gi|194167547|gb|EDW82448.1| GK25126 [Drosophila willistoni] Length = 784 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 136/602 (22%), Positives = 229/602 (38%), Gaps = 136/602 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN+A+ ++ EA G EL + GY ED F++ Sbjct: 1 MGRKITVAVSTLNQWALDFEGNLARILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + + ++ + S + + VG P + N V ++ +R K+ L Sbjct: 60 PDTFLHSWETLLEIMMSPICENML-VDVGMPVMHRNVAYNCRVAFFNRQLLLIRPKMALC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD LG ICE++ Sbjct: 119 DDGNYRESRWFTAWTKSLQTEEYLLPRLISEHTGQRTVPFGDAVIATRDTCLGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL----PIIYVNQVG 209 W + KH++ A +N S Y +L+K H I T I + ++ N G Sbjct: 179 WNVRS--KHIEMSLAGVELIVNGSGSYM-ELRKAH-ITTDLIRNASFKAGGAYLFSNLRG 234 Query: 210 GQDELI-FDGAS-FCFDGQ-----QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA 262 + + F+G S +G QQ A Q + E ++SQ + S + Sbjct: 235 CDGQRVYFNGCSAIALNGDILARGQQFALQDVEVTLATIDLEEIRAYRVSQRSRCSAAAG 294 Query: 263 STMY--------------------IPL-------QEEEADYNACVLSLRDYVQKNNFHKV 295 + Y PL +EE A AC L DY++++ Sbjct: 295 AASYPRIHCDFEMSTHSDIFKTSTPPLNFPNHTPEEEIALGPACW--LWDYLRRSGQGGF 352 Query: 296 IIGLSGGIDSALCAAI----------AV---DALGKENVQTIMLPYKYT----------- 331 + LSGG+DS+ A I AV DA +++ I+ YT Sbjct: 353 FLPLSGGVDSSSSATIVHSMCRQIVHAVQLGDAQVLHDIRKILADTDYTPDNPAALCNRL 412 Query: 332 -----------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP------ 374 S ++ AA A LG + + I VN + + P Sbjct: 413 LVTCFMGSVNSSKETRRRAAQLANQLGSYHIEISIDLAVNALLGIFNAVTGLTPRFRTQG 472 Query: 375 ----SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDM 422 + +NIQSRIR +++ + N +L L ++N E GY T Y Sbjct: 473 GCARQNLALQNIQSRIRMVLAYIFAQLMLWVRNRPGGLLVLGSANVDESLRGYLTKYDCS 532 Query: 423 SGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 S NP+ + KT + + + ++ + + P+ E SI++ P+AEL P Q + E Sbjct: 533 SADINPIGGISKTDLRRFLIYAKDKYNL-----PVLE----SIIDAPPTAELEPLQENGE 583 Query: 482 SL 483 L Sbjct: 584 LL 585 >gi|225426228|ref|XP_002263774.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297742398|emb|CBI34547.3| unnamed protein product [Vitis vinifera] Length = 724 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 124/597 (20%), Positives = 207/597 (34%), Gaps = 126/597 (21%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ LK+A LN D GN+ + + A G + L EL ++GY ED + Sbjct: 1 MRLLKVATCNLNQWAMDFDGNLKNIKESICRAKEAGAVIRLGPELEVTGYGCEDHFLELD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + A + L D D G +G P + N V+ I+ +R K+ L N Sbjct: 61 TITHAWECLKEILVGDWTD-GIFCSIGMPVIKESARYNCQVLCLNRKIVMIRPKMWLANN 119 Query: 121 SEFHEKRTFISGYSNDP-------------------------IVFRDIRLGILICEDIWK 155 + E R F + D + F D + + CE+++ Sbjct: 120 GNYRELRWFTTWKQKDELEDFQLPSEIAEALSQKSVPFGYGYVRFLDTAVAVETCEELFT 179 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 L+ G E + + S + KL R + G + +Y NQ G L Sbjct: 180 AMAPHAELQLNGVEVFMNASGSHHQLRKLDLRVQAFIGATHTIGGVYMYSNQQGCDGGRL 239 Query: 215 IFDGASFCFDGQQQLAFQMKHFS---------EQNFMTEWHYDQQLSQWNYMSDDS---A 262 +DG S C + Q FS + + + +S + + S Sbjct: 240 YYDGCS-CIVVNGNMVAQGSQFSLKDVEVVVAQVDLDAVASFRGSISSFQEQASSSRPKV 298 Query: 263 STMYIP----------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 S++ +P L EEE + L DY++++ ++ LS Sbjct: 299 SSVAVPVSLCQPFNLKMSLSGPLKVKYHLPEEEIAFGPSCW-LWDYLRRSGASGFLLPLS 357 Query: 301 GGIDSALCAAIA-------------------VDAL-----------------GKENVQTI 324 GG DS+ AAI DA+ K T+ Sbjct: 358 GGADSSSVAAIVGCMCQLVVKEIAEGDEQVKADAIRIGQYTDGQFPTDSKEFAKRIFYTV 417 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---------- 374 + + +S + + A A+ +G + + I ++ SL + P Sbjct: 418 FMGSENSSEATRKRAKVLAEEIGSWHLDICIDGVITALLSLFQTLTGKRPRYKVDGGSNI 477 Query: 375 SGIVAENIQSRIRGNILMALSN-----HSKA---MLLTTSNKSEISVGYGTLYGDMSGGF 426 + +NIQ+RIR + L++ H+KA ++L ++N E GY T Y S Sbjct: 478 ENLGLQNIQARIRMVLAFMLASLMPWVHNKAGFYLVLGSANVDEALRGYLTKYDCSSADI 537 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 NP+ + K + W H G L E I P+AEL P + + L Sbjct: 538 NPIGGISKQDLRGFLQWAAVH---LGYPSLAE-----IEAAPPTAELEPIRANYSQL 586 >gi|242778593|ref|XP_002479271.1| glutamine dependent NAD synthetase, putative [Talaromyces stipitatus ATCC 10500] gi|218722890|gb|EED22308.1| glutamine dependent NAD synthetase, putative [Talaromyces stipitatus ATCC 10500] Length = 723 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 122/580 (21%), Positives = 208/580 (35%), Gaps = 120/580 (20%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + ++A G L + EL I GY D + ++ Sbjct: 5 VTVATCNLNQWALDFEGNTQRIIESIQQAKAAGAKLRVGPELEICGYGCLDHLLEQDLFL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC ++ + +D + +G P Q + N VI G I+ +R K+ L N + Sbjct: 65 ACWEMLERILTDESCNDILLDIGMPVQHRNVRYNCRVICLNGKILLIRPKMYLANDGNYR 124 Query: 125 EKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F + + I D +G CE+++ + Sbjct: 125 EMRHFTPWCQPRATEQFHLPRRIQRLQGATHVIFGDAVISTPDTCIGAETCEELFTPDSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 H+ G E L + + S + KL+ R +++ +Y NQ G D L +DG Sbjct: 185 HAHMGLDGVEVLTNSSGSHFTLRKLETRLQLIMEATRKNGGIYLYANQQGCDGDRLYYDG 244 Query: 219 ASF------------------------CFDGQQQLAFQM---KHFSEQNFMTEWHYDQQL 251 + D ++ A++ + F ++ Q Sbjct: 245 CAMIIVNGTMVAQGTQFSLNDVEVVTATIDLEEVRAYRCSMSRAFQAAQSKAKYERIQTS 304 Query: 252 SQWNYMSDDSASTM--YIPL-------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + + DD T IP+ +EE A + C L DY++++ ++ LSGG Sbjct: 305 FELSSEEDDMDLTRGPSIPITPRYHSPEEEIALCSGCYLW--DYLRRSGVAGYLVPLSGG 362 Query: 303 IDSALCAAI-------AVDALGKENVQTI-----------MLP--------------YKY 330 IDS A I A++A+ N Q I LP Y Sbjct: 363 IDSCATATIVFSMCRLAIEAVKAGNAQVIEDVRRLAKYSVKLPETPQELCNQIFHTIYMG 422 Query: 331 TSPQSLEDAAACAK----ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------G 376 S QS ++ AK A+G + L I ++ + +L+ L +P Sbjct: 423 MSQQSSKETRQRAKDLSEAIGSYHVNLDIDEVYHAQKALIKTTLGFDPKFKVEGGTQAEN 482 Query: 377 IVAENIQSRIR-------GNIL---MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 ++ +NIQ+R R IL ++L ++N E GY T Y S Sbjct: 483 LMLQNIQARSRMVTAYEFAQILPTTRGRPGGGGLLVLGSANVGESLRGYLTKYDCSSADI 542 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NP+ + K+ + + +W L +P + LE Sbjct: 543 NPIGSIDKSDLKRFIAWAEKEFDIPCLQEFLNAVPTAELE 582 >gi|332716999|ref|YP_004444465.1| NH3-dependent NAD+ synthetase [Agrobacterium sp. H13-3] gi|325063684|gb|ADY67374.1| NH3-dependent NAD+ synthetase [Agrobacterium sp. H13-3] Length = 332 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 57/240 (23%) Query: 257 MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN---NFHK--VIIGLSGGIDSALCAAI 311 M++++ S + PL E D A V + + ++++ N K +++G+SGGIDS++CAA+ Sbjct: 1 MTNNAQSLPFSPL---ELDAAAEVERIAEKIRQSLRFNLRKRGLVLGISGGIDSSVCAAL 57 Query: 312 AVDALGKENVQTIMLPYKYTSPQS----------------LEDAAACAKALGCK------ 349 AV ALG NV + +P + P+S LED A+GC Sbjct: 58 AVHALGAANVIGLFMPENDSDPESLRLGQALATKLGMDCVLEDIGPSLAAMGCYERRDGF 117 Query: 350 -YDVLPIHD-------LVNHFFSL----MSQFLQEEPSG---------------IVAENI 382 +V+P + + ++ S +S + PSG + A N+ Sbjct: 118 IREVVPEYGPGWASKIVFDNAMSTGAYNISSLVVRSPSGETRKVRLSAKAYLGIVAATNM 177 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 + R R ++ +L T N+ E G+ GD + P+ LYK+QV+QLA+ Sbjct: 178 KQRTRKQFEYYHADRLNFAVLGTPNRLEYDQGFFVKNGDGAADIKPIAHLYKSQVYQLAA 237 >gi|296825576|ref|XP_002850837.1| glutamine-dependent NAD(+) synthetase [Arthroderma otae CBS 113480] gi|238838391|gb|EEQ28053.1| glutamine-dependent NAD(+) synthetase [Arthroderma otae CBS 113480] Length = 704 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 125/587 (21%), Positives = 211/587 (35%), Gaps = 129/587 (21%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L D GN + + +A G L + EL I GY D F+ C Sbjct: 7 VASCSLRTWALDFEGNTRRIIESIHKAKAAGATLRVGPELEICGYSCLDHFFEADLYLHC 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + D + +G P + N +I G I+ +R K+ L N + E Sbjct: 67 WEMLCIILKDRSCDDILLDIGMPVMHRNNRFNCRIICLNGKILLIRPKLWLANDGIYREM 126 Query: 127 RTFISGYSND-------PIVFRDIR------------------LGILICEDIWKNSNICK 161 R FI P + R+I+ +G+ CE+++ + Sbjct: 127 RHFIPWAGPRHVEEYYLPRMVREIQGSIKVPIGDAVISTADTCVGMETCEELFTPQSPHN 186 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGAS 220 + G E + + + S + KL R ++ +Y N +G D L FDG++ Sbjct: 187 DMSLNGVEIMANSSGSHHTLRKLDVRVSLIMEATRKNGGIYLYANHLGCDGDRLYFDGSA 246 Query: 221 FCF------------------------DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNY 256 D ++ +++ M Y + ++++ Sbjct: 247 MIIVNGNLVAQGHQFTLDEVDVITAVVDLEEVRSYRCTPSRGHQSMKAGVYMRIETEFSL 306 Query: 257 MSD--DSASTM---------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 SD D +T+ Y +EE A C L DY++++ ++ LSGGIDS Sbjct: 307 SSDRGDRDTTLRPSLVIQPRYYSPEEEIALSTGCWLW--DYLRRSGTAGYLVPLSGGIDS 364 Query: 306 ALCAA-------IAVDALGKENVQ-----------TIMLPY------------------K 329 A + +DA+ N Q T+ LP K Sbjct: 365 CATAMTVFSMCQLVIDAIKAGNEQVIKDCKRLADYTLELPKTPQELCNQIFHTVYMGMSK 424 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------GIVA 379 +S ++ E A ++A+G + L I D+ +L+ ++L +P ++ Sbjct: 425 QSSRETRERANDLSEAIGSYHVDLDIDDVFEAQKNLIVKYLDFDPKFKSQGGTNAENLML 484 Query: 380 ENIQSRIRGNILMALSN---------HSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPL 429 +NIQ+R R + H A+L L ++N E GY T Y S NP+ Sbjct: 485 QNIQARSRMVTAYEFAQMLPTTRKRPHGGALLVLGSANVGEALRGYYTKYDCSSADINPI 544 Query: 430 KDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 L K+ + SW S+ I G LE +P+AEL P Sbjct: 545 GGLDKSDLKLFISWAEKSYSIPCLRG---------FLEATPTAELEP 582 >gi|302671492|ref|YP_003831452.1| NAD synthetase NadE [Butyrivibrio proteoclasticus B316] gi|302395965|gb|ADL34870.1| NAD synthetase NadE [Butyrivibrio proteoclasticus B316] Length = 269 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 38/240 (15%) Query: 283 LRDYVQKNNFH-KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 +R++ +N ++G+SGG DS + AA+ ALGKE V +++P + ++D+ Sbjct: 20 IREWFDENGPKASAVVGISGGKDSTIVAALLTRALGKERVVGVLMP--DGEQKDIDDSKK 77 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFL-------QEEPSGIVAENIQS---------R 385 + LG K V+ IH V + + ++E +G ++N S R Sbjct: 78 VVELLGIKNYVVNIHPAVAGLYEAIGNAKVTDPFSSEDEKTGEDSKNALSKDSMINTPPR 137 Query: 386 IRGNILMALSNH--SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 IR L A++ + + T N+SE VGY T YGD +G F+P D T++ Sbjct: 138 IRMATLYAIAQSLPNGGRVANTCNRSEDYVGYSTKYGDAAGDFSPCSDFTVTEM------ 191 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDD-IIKRIVENEE 501 I LG +P ++ K+PS L +D++ L Y LD I ++E+E+ Sbjct: 192 ---RLIGDALG-----LPAELIHKTPSDGLS-GMSDEDKLGFTYDELDRYIFTGVLEDED 242 >gi|225175455|ref|ZP_03729450.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Dethiobacter alkaliphilus AHT 1] gi|225169207|gb|EEG78006.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Dethiobacter alkaliphilus AHT 1] Length = 305 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 4/154 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q P + D+ N+ A +G DL++F EL ++GY D F + ++ Sbjct: 1 MKVTVYQTAPKLLDLKSNLEDVISKIHHAREKGSDLVVFPELALTGYFVGDR-FHEVALR 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S I +L + + G +VGF + + NS ++L G I+ K NLPNY F Sbjct: 60 MDSDEIKSLAAASK--GTAAIVGFIEESRSMNFYNSALVLVDGEIVFAYRKTNLPNYGVF 117 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS 157 E + F +G + + + IC D+W S Sbjct: 118 EEGKLFSTGKRICTFDYMGFHIAVFICNDMWHPS 151 >gi|167971532|ref|ZP_02553809.1| NAD+ synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186701193|gb|EDU19475.1| NAD+ synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 255 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 22/195 (11%) Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 Q NN VI+G+SGGIDS L AI D L KE I + SL+ C L Sbjct: 24 QTNN---VILGISGGIDSTLTLAILND-LKKEYDLNIYAYFLDIHNSSLD--YECINELK 77 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 Y + + +LV+ + S ++ V N++ +IR N L A++N K ++++ N Sbjct: 78 NIYTNIEVINLVDIYDSYCKMINKKTNDKYVLYNLKPKIRTNYLYAMANAYKGVVVSNLN 137 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 E +G+ T YGD + + L L K +++L ++ + +P IL + Sbjct: 138 YDEYILGFFTKYGDSAADYYMLIGLLKKHIYELGAYYH--------------LPNKILNR 183 Query: 468 SPSA--ELRPHQTDQ 480 +P+ E H+TD+ Sbjct: 184 APTPANEDDEHKTDE 198 >gi|110597734|ref|ZP_01386018.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium ferrooxidans DSM 13031] gi|110340641|gb|EAT59121.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium ferrooxidans DSM 13031] Length = 285 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 13/224 (5%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K+ IAQ + + + N+ + E+A R G D I+F EL ++GY +D + + Sbjct: 5 KLRIAQSDCTLANFDENLERHCTLTEQAIRDGADAIVFPELSLTGYNVQDAA-QDIAMHI 63 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L+ + I+ G +E GV NS ++ + G ++ KI LP Y F Sbjct: 64 EDARLAPLRELSRK--ITIICGSIELSEEYGVYNSALMFEEGVGRSIHRKIYLPTYGMFE 121 Query: 125 EKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F +G + + + R+G+ ICED W S + L QGA+ L L +SP + Sbjct: 122 ELRYFSAGQQIKAVNSKKLGRIGVAICEDFWHVS-VPYLLAHQGAKLLLVLMSSPLRLSP 180 Query: 184 LKKRHEIVT--GQISHVHL-----PIIYVNQVGGQDELIFDGAS 220 IVT I+ + + VN+VG +D + G S Sbjct: 181 GSGNPAIVTQWQTIASTYAFLFSSYVACVNRVGNEDSFTYWGNS 224 >gi|149194406|ref|ZP_01871503.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caminibacter mediatlanticus TB-2] gi|149135581|gb|EDM24060.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caminibacter mediatlanticus TB-2] Length = 247 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 22/262 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+ P + N+ K ++ + DL++F EL ++GY +D + + +F + Sbjct: 1 MKIALAQIRPKLS--PDNLDKHKKF---IKKSSADLVIFPELSMNGYKVKDALIEDAFNE 55 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +LK D +V+G +D+ + NS + L G+ +K++LP Y F Sbjct: 56 ---EFFRSLKFDKD-----VVLGAAIKDEGRIYNSALYL--GDSFHRHNKVHLPTYGVFE 105 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP---YYH 181 E R F G + + I ICED++ I + KQ + + ++ASP + Sbjct: 106 EGRFFFRGKDFSCFNTKFGKTTIFICEDVFSGDAI-NFVSKQKPDLIIVISASPAREFKE 164 Query: 182 NKLKKRHEIVTGQISHVHLP---IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 KL E S L + + N+VG +D L F G S + + ++ + K+F E Sbjct: 165 GKLLIEEEWEALLKSMAILSGGYVAFCNRVGFEDGLGFWGGSKIINPKGEIEVEAKYFGE 224 Query: 239 QNFMTEWHYDQQLSQWNYMSDD 260 + E ++ +Q ++ + Sbjct: 225 ELIECELNHHLTFTQKYFLRKE 246 >gi|325673136|ref|ZP_08152829.1| N-carbamoylputrescine amidase [Rhodococcus equi ATCC 33707] gi|325555971|gb|EGD25640.1| N-carbamoylputrescine amidase [Rhodococcus equi ATCC 33707] Length = 278 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 16/275 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A+AQL P + D N A A +G D+++ EL +SGY + + + Sbjct: 1 MTGRAHVAVAQLAPRLLDFEANADMTVDAIASARERGADIVVLPELCLSGYMFDTMDEAR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVV-GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S + + G G+VV GF + + S ++ A + AV K +L N Sbjct: 61 SCAITPEHPVFARWARALAGSQGLVVGGFAERSGSRLHISAAVVGATGVQAVYRKTHLWN 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL-----FS 173 EKR F +G P+V R+G+LIC D+ + + + L +GA+ + ++ Sbjct: 121 ----REKRFFTAGTEAPPVVDTAFGRVGVLICYDL-EFPEMARSLAMRGADLIAVPTNWA 175 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD--GQQQLAF 231 L+A PY + + +HVH + ++ G + + F G S D G Sbjct: 176 LDARPYGDEPPQVMLARAAARTNHVH--VACADRAGRERDQDFTGGSAVIDTAGWVLDTP 233 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 F+ D+Q+S N++ D +Y Sbjct: 234 DATGFAAAVLTLTTARDRQISGVNHVFGDRRPELY 268 >gi|195478387|ref|XP_002100501.1| GE16145 [Drosophila yakuba] gi|194188025|gb|EDX01609.1| GE16145 [Drosophila yakuba] Length = 787 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 133/601 (22%), Positives = 230/601 (38%), Gaps = 138/601 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN+ + ++ EA G EL + GY ED F++ Sbjct: 1 MGRKVTVAVSTLNQWALDFEGNMVRILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + ++ + S + + VG P + N V I+ +R K+ + Sbjct: 60 PDTFLHSWEVLLEVMMSPMCENML-VDVGMPVMHRNVAYNCRVAFFNRQILLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD LG ICE++ Sbjct: 119 DDGNYRESRWFTAWTKALQTEEYVLPRMIAQHTGQQTVPFGDAVIATRDTCLGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL----PIIYVNQVG 209 W + KH++ A +N+S Y +L+K H I + I + ++ N G Sbjct: 179 WNVRS--KHIEMSLAGVELIVNSSGSYM-ELRKAH-ITSDLIRNASFKAGGAYLFSNLRG 234 Query: 210 GQDELI-FDGAS-FCFDGQ-----QQLAFQ-------------------------MKHFS 237 + + F+G S +G+ QQ A Q M S Sbjct: 235 CDGQRVYFNGCSAIALNGEILARSQQFALQDVEVTLATIDLEEIRAYRVSLRSRCMAAAS 294 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKNNFHK 294 ++ H D ++S N + S + P+ +EE A AC L DY++++ Sbjct: 295 AADY-PRIHCDFEMSTHNDIFKTSTPPLNWPILTPEEEIALGPACW--LWDYLRRSGQGG 351 Query: 295 VIIGLSGGIDSALCAAI----------AV---DALGKENVQTIMLPYKYT---------- 331 + LSGG+DS+ A I AV DA +++ I+ YT Sbjct: 352 FFLPLSGGVDSSSSATIVHSMCRQIVQAVQLGDAQVLHDIRQILADSDYTPDNAAGLCNR 411 Query: 332 ------------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----- 374 S ++ AA A LG + + I VN S+ + P Sbjct: 412 LLVTCYMGSVNSSKETRRRAAQLANQLGSYHIEISIDSAVNALLSIFNAVTGLTPRFRTQ 471 Query: 375 -----SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGD 421 + +N+QSRIR +++ + N +L L ++N E GY T Y Sbjct: 472 GGCARQNLALQNMQSRIRMVLAYIFAQLMLWVRNRPGGLLVLGSANVDESLRGYLTKYDC 531 Query: 422 MSGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 S NP+ + K + + ++ ++ + P+ E SI++ P+AEL P Q + Sbjct: 532 SSADINPIGGISKMDLRRFLTYAKDKFNL-----PVLE----SIIDAPPTAELEPLQENG 582 Query: 481 E 481 E Sbjct: 583 E 583 >gi|146329098|ref|YP_001209124.1| NAD+ synthetase [Dichelobacter nodosus VCS1703A] gi|146232568|gb|ABQ13546.1| NAD+ synthetase [Dichelobacter nodosus VCS1703A] Length = 248 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 19/189 (10%) Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +G+SGGIDSA+C + GK VQ ++LP + EDA K +++ + Sbjct: 29 LGVSGGIDSAVCLHLLAKT-GKP-VQALVLPIN-ANANDCEDAELVLKNANISGNIIALD 85 Query: 357 DLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D+ + ++ L E ++ N+ +R+R +L ++ +++++ T N E +G Sbjct: 86 DVYTAAQNTLAPVLNRDYERMPVLNGNLMARLRMVMLYTVAQSHRSVVVGTDNAVEYYLG 145 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T +GD + PL L K++V QLA LG +P I EK+PSA L Sbjct: 146 YFTKFGDGACDILPLAKLTKSEVGQLA---------KALG-----VPKKIREKAPSAGLW 191 Query: 475 PHQTDQESL 483 QTD+ + Sbjct: 192 QGQTDENEI 200 >gi|307320617|ref|ZP_07600031.1| NAD+ synthetase [Sinorhizobium meliloti AK83] gi|306893767|gb|EFN24539.1| NAD+ synthetase [Sinorhizobium meliloti AK83] Length = 334 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 54/232 (23%) Query: 261 SASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN 320 SA T+ I +E A+ + V LR ++ +++GLSGGIDS++ A+AV A+G +N Sbjct: 13 SADTLKI---DEAAEADRIVAGLRAQLRSLRKRGLVLGLSGGIDSSVSVALAVRAVGAKN 69 Query: 321 VQTIMLPYKYTSPQSL----------------EDAAACAKALGC--KYDVLPIHDLVNHF 362 V + +P + P+SL ED A+GC + D I +LV + Sbjct: 70 VYCLFMPENDSDPESLRLGRLVAETFGVEAVVEDIGPTLDAMGCYQRRDAF-IRELVPDY 128 Query: 363 FSL-----------------MSQFLQEEPSG---------------IVAENIQSRIRGNI 390 +S + ++P G + A N++ R R I Sbjct: 129 GPGWASKIVIANALEGDGYNISSLVVQDPEGKQTKLRMPPSVYLGIVAATNMKQRTRKQI 188 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++ +L T N+ E G+ GD + P+ LYK+QV+ LA Sbjct: 189 EYYHADRLNFAVLGTPNRLEYDQGFFVKNGDGAADVKPIAHLYKSQVYALAG 240 >gi|322419189|ref|YP_004198412.1| NAD+ synthetase [Geobacter sp. M18] gi|320125576|gb|ADW13136.1| NAD+ synthetase [Geobacter sp. M18] Length = 328 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 74/289 (25%) Query: 257 MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK--VIIGLSGGIDSALCAAIAVD 314 M++ S S++ + + E +A +RD + +N+ + ++IGLSGGIDS++ AA+AV Sbjct: 1 MTELSTSSLTLDCEREAEIISA---RIRD-ILRNDLKRRGLVIGLSGGIDSSVTAALAVR 56 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC---KYDVLPIHDLV------------ 359 A+G+E V + +P ++S ++ E ++ + LG + D+ PI + V Sbjct: 57 AIGRERVLGLEMPEFHSSKETPELSSTLVRHLGIESRQIDISPILEAVGFYADYDEAVRM 116 Query: 360 --------------------NHFFSLMSQFLQEEPSG---------------IVAENIQS 384 N FSL S + + P G + A N + Sbjct: 117 VIPEYGTGWRSKIVISNIFDNEGFSLHS-IVAKSPDGSMHQKRLPLKPYLEIVAATNCKQ 175 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 RIR + ++ + T N+ E G+ GD + P+ LYK+QV+Q+A Sbjct: 176 RIRKMLEYYHADRHNYAVAGTPNRLEYDQGFFVKLGDGAADIKPIAHLYKSQVYQMAEH- 234 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL---PPYPILD 490 LG +P I + P+ + Q Q+ PY I+D Sbjct: 235 --------LG-----VPAEIRRRPPTTDTYSLQQGQDEFYFSLPYGIMD 270 >gi|78189042|ref|YP_379380.1| carbon-nitrogen hydrolase family protein [Chlorobium chlorochromatii CaD3] gi|78171241|gb|ABB28337.1| carbon-nitrogen hydrolase family protein [Chlorobium chlorochromatii CaD3] Length = 280 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/234 (27%), Positives = 94/234 (40%), Gaps = 25/234 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL----- 56 ++ + IAQ++ + + N+A E A GMD I F EL ++GY +D Sbjct: 1 MQNATLRIAQIDCTLANFQENLATHCTLIEAAIADGMDAIAFPELSLTGYNLQDAAQDIA 60 Query: 57 --VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 + + F C + I G ++ GV N+ + + G + K Sbjct: 61 MHINDERFAPLCELSRHITI---------ICGGVELSNEYGVYNAAFMFEDGRGETIHRK 111 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFS 173 I LP Y F E R F +G I R + R+G+ ICED W S + L QGA+ L Sbjct: 112 IYLPTYGMFEELRYFSAGKQIRAITSRRLGRIGVAICEDFWHIS-VPYLLAHQGAQLLLV 170 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLP-------IIYVNQVGGQDELIFDGAS 220 L +SP IV S + VN+VG +D F G S Sbjct: 171 LMSSPMRLKPGSGEPAIVQQWRSIAATCSFLFSGYVACVNRVGNEDSFTFWGNS 224 >gi|282163115|ref|YP_003355500.1| NH(3)-dependent NAD(+) synthetase [Methanocella paludicola SANAE] gi|282155429|dbj|BAI60517.1| NH(3)-dependent NAD(+) synthetase [Methanocella paludicola SANAE] Length = 323 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 42/202 (20%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R +++ N +IGLSGG+DS+ A + V+ALGKE V ++LP + T+P++ ED Sbjct: 25 IRSQIRRFNKKGTMIGLSGGLDSSTVAFLCVEALGKEKVMGLILPERDTTPKNTEDGIDL 84 Query: 343 AKALGCKY---DVLPIH------------------------DLVNHFFSLMSQFLQE--- 372 A+ LG Y D+ PI D + S F + Sbjct: 85 AEKLGIPYKKIDISPILEGLGAYTLFPKEVTSSRSAMEEAVDRMKRMTGKQSAFAESFSS 144 Query: 373 --EPSGIVAENIQSRIRGNI-------LMALSNHSKAM---LLTTSNKSEISVGYGTLYG 420 P G ++ R+ + +M + H+ M ++ T + SE+++G+ YG Sbjct: 145 IYTPGGAQEDHYVGRMHAFMTAKTRARMMTIYFHAIIMDYLVVGTDDLSELTIGFYDKYG 204 Query: 421 DMSGGFNPLKDLYKTQVFQLAS 442 D + + L L+KTQ+ LA+ Sbjct: 205 DGACDISILSHLFKTQIKALAA 226 >gi|269792536|ref|YP_003317440.1| NAD+ synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100171|gb|ACZ19158.1| NAD+ synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 248 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 20/219 (9%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 +P++ E A V +R V + ++GLSGG+DSA+ AA+ + A G+ +++ Sbjct: 4 VPVRSPEYLERALVGWIRRKVSEAGALGGVVGLSGGVDSAVVAALLMRAFGRGGSLGVLM 63 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQS 384 P S EDA A ALG L + DL + F S++ E S + NI+ Sbjct: 64 PCHSMSSDE-EDAWLVASALGIP--ALKV-DLSSPFDSMLEALSLGGVEMSQMSRANIKP 119 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R+R L A++ ++ T N++E++ GY T YGD PL L K +V+ LA + Sbjct: 120 RLRMTTLYAIAQGRNFLVCGTGNRAELTYGYFTKYGDSGVDILPLSRLLKHEVWALAEF- 178 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 LG +P +++K P+A L QTD+E + Sbjct: 179 --------LG-----VPERVIKKPPTAGLWEGQTDEEEM 204 >gi|13358023|ref|NP_078297.1| NH(3)-dependent NAD(+) synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168281653|ref|ZP_02689320.1| NAD+ synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|168307795|ref|ZP_02690470.1| NAD+ synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|170762440|ref|YP_001752545.1| NAD+ synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|11356993|pir||E82888 NH(3)-dependent NAD(+) synthetase UU460 [imported] - Ureaplasma urealyticum gi|6899453|gb|AAF30872.1|AE002142_6 NH(3)-dependent NAD(+) synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168828017|gb|ACA33279.1| NAD+ synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902574|gb|EDT48863.1| NAD+ synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182676005|gb|EDT87910.1| NAD+ synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 255 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 22/195 (11%) Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 Q NN VI+G+SGGIDS L AI D L KE I + SL+ C L Sbjct: 24 QTNN---VILGISGGIDSTLTLAILND-LKKEYDLNIYAYFLDIHNSSLD--YECINELK 77 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 Y + + +LV+ + S ++ V N++ +IR N L A++N K ++++ N Sbjct: 78 NIYPNIEVINLVDIYDSYCKMINKKTNDKYVLYNLKPKIRTNYLYAMANAYKGVVVSNLN 137 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 E +G+ T YGD + + L L K +++L ++ + +P IL + Sbjct: 138 YDEYILGFFTKYGDSAADYYMLIGLLKKHIYELGAYYH--------------LPNKILNR 183 Query: 468 SPSA--ELRPHQTDQ 480 +P+ E H+TD+ Sbjct: 184 APTPANEDDEHKTDE 198 >gi|188024008|ref|ZP_02996769.1| NAD+ synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188019034|gb|EDU57074.1| NAD+ synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] Length = 255 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 22/195 (11%) Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 Q NN +I+G+SGG+DS+L AI D L KE I + +L+ C L Sbjct: 24 QTNN---IILGISGGVDSSLTLAILND-LKKEYALNIYAYFLDIHNSNLD--YECVSELK 77 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 Y + I +LV+ + S ++ V N++ +IR N L A++N + ++++ N Sbjct: 78 KVYPNIEIINLVDIYNSYRLLINKKTNDNYVLYNLKPKIRTNYLYAMANAYRGVVVSNLN 137 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 E +G+ T +GD + ++ L L K +++L ++ + +P IL + Sbjct: 138 YDEYILGFFTKHGDSAADYHMLIGLLKKHIYELGAYYS--------------LPTKILNR 183 Query: 468 --SPSAELRPHQTDQ 480 +PS E HQTD+ Sbjct: 184 APTPSNEDDEHQTDE 198 >gi|91080973|ref|XP_974893.1| PREDICTED: similar to CG9940 CG9940-PA [Tribolium castaneum] gi|270005354|gb|EFA01802.1| hypothetical protein TcasGA2_TC007403 [Tribolium castaneum] Length = 724 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 119/595 (20%), Positives = 214/595 (35%), Gaps = 116/595 (19%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A + LN D GN + + EA G EL I GY ED ++ Sbjct: 1 MGRKVTVASSTLNQWALDFDGNRERILESILEAKDLGATFRTGPELEICGYSCEDHFYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 C + L + I VG P + N V+ I+ +R K+ + + Sbjct: 61 DTFLHCWEVLLELLTAPLCKDMIIDVGMPVMHKNVAYNCRVVFLNQKILLIRPKLKMCDD 120 Query: 121 SEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWK 155 + E R F +G S PI RD LG ICE++W Sbjct: 121 GNYRESRWFAPWKKIRQTEDYFLPRMISKFTGQSTVPIGDAVIATRDTCLGFEICEELWN 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 ++ ++ G E + + + S K ++V I+ N G + + Sbjct: 181 PASSHINMALDGVEIISNSSGSYTELRKAFVSVDLVKSATFKAGGCYIFSNLRGCDGQRV 240 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTE---------WHYDQQLSQWNYMSDDSAS--- 263 + G C + + K F+ Q+ Y Q+ +++ +S S Sbjct: 241 YFGGCSCVALNGNIISRAKQFALQDVEVTVATLDLEDIRSYRNQIRSLAHLAAESPSYPR 300 Query: 264 ----------------------TMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +Y+ +EE A AC L DY++++ + LSG Sbjct: 301 VVVDFSLSQEQDATLPIASPIEWVYLRPEEEIAQGPACWLW--DYLRRSGQGGFFLPLSG 358 Query: 302 GIDSALCAAIA-------VDALGK------ENVQTIMLPYKYT----------------- 331 G+DS+ A I V+A+ + +++ ++ +YT Sbjct: 359 GVDSSSVALIVFSMCKMLVEAVQRGDNRVLSDLRRVLGDPEYTPRTPSELCNRILVTCYM 418 Query: 332 -----SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------G 376 S ++ + AA A ++G + + I + + S P Sbjct: 419 GTENSSKETKQRAATLAASIGSYHMHIMIDKAITAIIEIFSGVTGLFPKFASRGGCPRQN 478 Query: 377 IVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSGGFNP 428 + +NIQ+R+R +++ N +L L ++N E GY T Y S NP Sbjct: 479 LALQNIQARLRMVLSYLFAQLMLWARNRPGGLLVLGSANVDEALRGYMTKYDCSSADINP 538 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + + KT + + ++ S +G + + P + LE P + + QTD+E + Sbjct: 539 IGGISKTDLRRFLNYAKSKFEIPVIGEIVDAPPTAELE--PLQDGKLAQTDEEDM 591 >gi|92114472|ref|YP_574400.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chromohalobacter salexigens DSM 3043] gi|91797562|gb|ABE59701.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chromohalobacter salexigens DSM 3043] Length = 286 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 18/157 (11%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVFKK 60 ++A AQ+N V+ D+A N+ RR E A + +D+++F EL ++GY PE + + Sbjct: 9 RLAAAQMNCVLADVACNLETHRRVIESARHREVDVLVFPELSLTGYNLGARVPEVAMDRD 68 Query: 61 S--FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINL 117 +Q +A D L VVGF + G N++ L G ++AV K+NL Sbjct: 69 DPRLLQLADAAGDMLT----------VVGFVERCARGEYANAMACLCEGRVVAVHRKLNL 118 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 Y E + F G + + G++IC D+W Sbjct: 119 CTYGGHEEGKHFGKGQTLTVTDADGLACGVMICADLW 155 >gi|294155786|ref|YP_003560170.1| NAD+ synthetase [Mycoplasma crocodyli MP145] gi|291600118|gb|ADE19614.1| NAD+ synthetase [Mycoplasma crocodyli MP145] Length = 268 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 27/204 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +++ V + ++G+SGGIDSAL AA+A ALGK N+ +++P S ED Sbjct: 30 IKNKVNDSGLKGAVVGISGGIDSALVAALAKKALGK-NLIGVVMPINDMS-FDFEDINEL 87 Query: 343 AKALGCKY---DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 K+L K+ ++ ++ +N L + + NI R+R L A++ + Sbjct: 88 EKSLDLKFININLKETNETINKELKL--------NNSLAKANIMPRLRMTTLYAIAQENN 139 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++L T NK E VGY T YGD P+ L K +V L+S N Sbjct: 140 SLVLGTDNKDEFHVGYFTKYGDGGVDLLPICHLTKGEVRYLSSLLN-------------- 185 Query: 460 IPPSILEKSPSAELRPHQTDQESL 483 IP I+ K PSA L Q D++ + Sbjct: 186 IPSRIINKKPSAGLWQGQNDEDEM 209 >gi|296269525|ref|YP_003652157.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermobispora bispora DSM 43833] gi|296092312|gb|ADG88264.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Thermobispora bispora DSM 43833] Length = 276 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 7/152 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ QL PV+GD GN+ +A RA A +G +++ EL SGY D + Q Sbjct: 3 VRVAVCQLAPVLGDPGGNLDRALRAVAAAADRGARIVVLPELVTSGYVFADEAEARRAAQ 62 Query: 65 -ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSE 122 A A+ L D G + GFP D+EG L NS V+ D G + A+ K++L + Sbjct: 63 PADGPAVTALARAARDRGLVVCFGFPELDEEGRLRNSAVLADPGGVRAIYRKVHLWD--- 119 Query: 123 FHEKRTFISGYSNDPIVFRDI-RLGILICEDI 153 EK F++G P+V ++ R+G++IC D+ Sbjct: 120 -REKEIFLAGDEPPPVVETELGRIGLVICYDL 150 >gi|254410906|ref|ZP_05024684.1| NAD+ synthetase [Microcoleus chthonoplastes PCC 7420] gi|196182261|gb|EDX77247.1| NAD+ synthetase [Microcoleus chthonoplastes PCC 7420] Length = 333 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 67/250 (26%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS----------------LEDA 339 ++G+SGGIDS++ + A G E V ++LP +SP+S ED Sbjct: 46 VLGISGGIDSSVVLGLCAKAFGSERVVALLLPEGESSPESATLAQLVADHYGVQTITEDI 105 Query: 340 AACAKALGC-KYDVLPIHDLVNHF-------FSLMSQFLQEE-----------PSG---- 376 + GC + I L F +L L++E P G Sbjct: 106 SGVLDGFGCYRRRNDAIKRLFPQFGESWQAKIALPGNLLEKETLNIFSLTVTNPEGEEFT 165 Query: 377 -----------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + A N + R R +L + + ++ T NK+E +G+ YGD Sbjct: 166 KRLPPQEYYQIVAASNFKQRSRMAMLYYHAELNNYAVIGTPNKNEHLLGFFVKYGDGGID 225 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-- 483 +P+ L+KTQV+QLA + + +P I +++P+++ P + QE Sbjct: 226 VSPIAHLFKTQVYQLARYLD--------------VPEDIQQRTPTSDTYPGGSSQEEFFF 271 Query: 484 -PPYPILDDI 492 P+ ILD I Sbjct: 272 RLPFDILDTI 281 >gi|294340108|emb|CAZ88479.1| putative NH(3)-dependent NAD(+) synthetase [Thiomonas sp. 3As] Length = 332 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 58/204 (28%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS--------------- 335 N V++GLSGG+DS++CAA+AV ALG + V +++P + +S S Sbjct: 34 NKRGVVLGLSGGVDSSVCAALAVRALGPQRVFGLLMPERDSSDNSATLGGQVAQQLGIES 93 Query: 336 -LEDAAACAKALGCKY-------DVLPIHDL---------------VNHFFSLMSQFLQE 372 +E+ A +A+GC + VLP ++ +NHF + + + Sbjct: 94 TVENIAPALEAIGCYHWRDEAVRAVLPGYNAQWKIKLAISGGLAGGINHF-----KIIAQ 148 Query: 373 EPSG---------------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 P G + A N + R+R + ++ ++ T N+ E G+ Sbjct: 149 APDGQMHEARLPLREYLQIVAATNHKQRLRKTLEYFHADRLNYAVIGTPNRLEYDQGFFV 208 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLA 441 GD S P+ LYKTQV+ LA Sbjct: 209 KNGDGSADLKPIAHLYKTQVYALA 232 >gi|227831747|ref|YP_002833527.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus L.S.2.15] gi|229580711|ref|YP_002839111.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus Y.G.57.14] gi|229583561|ref|YP_002841960.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus Y.N.15.51] gi|229586219|ref|YP_002844721.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus M.16.27] gi|238621204|ref|YP_002916030.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus M.16.4] gi|284999312|ref|YP_003421080.1| Nitrilase/cyanide hydratase or apolipoprotein N-acyltransferase [Sulfolobus islandicus L.D.8.5] gi|227458195|gb|ACP36882.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus L.S.2.15] gi|228011427|gb|ACP47189.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus Y.G.57.14] gi|228014277|gb|ACP50038.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus Y.N.15.51] gi|228021269|gb|ACP56676.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus M.16.27] gi|238382274|gb|ACR43362.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus M.16.4] gi|284447208|gb|ADB88710.1| Nitrilase/cyanide hydratase or apolipoprotein N-acyltransferase [Sulfolobus islandicus L.D.8.5] gi|323476123|gb|ADX86729.1| nitrilase superfamily [Sulfolobus islandicus REY15A] gi|323478846|gb|ADX84084.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus HVE10/4] Length = 270 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 29/254 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ+ GD+ N K E + D ++F EL ++GY +DL + + Sbjct: 3 IRVELAQIRSYPGDVYRNYKKHLEIIETST---ADCVIFPELSLTGYIIKDLTY-----E 54 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 A + + V G ++ ++G+L N+ ++ G + + K LP Y F Sbjct: 55 IYKDAEEATRKIAEKVNKCAVFGTIKEVRKGILRNAAAVIINGKMDYIY-KFYLPTYGLF 113 Query: 124 HEKRTFISGYSNDPIV------FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 E+R F G DP+ +RD++ G++ICED W I + L GA+ +F +AS Sbjct: 114 EERRYFQRG---DPLKDLKIFEYRDLKFGVVICEDAWHPEPI-EALSLMGADAIFIPSAS 169 Query: 178 PYYHNKLKKRHEIVTGQISHVH-------LPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 P KL++ I S + + ++ N VG Q+E F G S + Sbjct: 170 P--MRKLRENLAIEESWDSLLKAHSLMNTVWTVFTNVVGSQEEEYFWGGSRVVSPLGDVK 227 Query: 231 FQMKHFSEQNFMTE 244 ++ F E + E Sbjct: 228 LKLNLFYEDRGVVE 241 >gi|83319278|ref|YP_424503.1| NH3-dependent NAD+ synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|4545064|emb|CAA83707.1| ATP pyrophosphatase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283164|gb|ABC01096.1| NH3-dependent NAD+ synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 253 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 35/203 (17%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K V++G+SGGIDSA+ A +A A +N T+ +P Y+S + Sbjct: 28 VKKAKCDGVVVGISGGIDSAVVANLAKRAF-PDNYLTVWMPI-YSSQLDYD--------- 76 Query: 347 GCKYDVLPIHDLVNHFFSLMSQF---------LQEEPSGIVAENIQSRIRGNILMALSNH 397 C +++ + L N +L + F L E+P+ + N ++R+R L ++ Sbjct: 77 -CVNELIKTNQLKNIEVNLEASFDAFKNSFSNLDEKPNLLAISNSKARLRMTTLYTIAQT 135 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 K ++L T N E +GY T YGD P+ L K++V + A N Sbjct: 136 KKYLVLGTDNLDEWHIGYFTKYGDGGVDVVPIIHLLKSEVKKAAKILN------------ 183 Query: 458 EVIPPSILEKSPSAELRPHQTDQ 480 +P I+ + P+A L QTD+ Sbjct: 184 --VPELIINRKPTAGLWEGQTDE 204 >gi|238754608|ref|ZP_04615962.1| N-carbamoylputrescine amidase [Yersinia ruckeri ATCC 29473] gi|238707239|gb|EEP99602.1| N-carbamoylputrescine amidase [Yersinia ruckeri ATCC 29473] Length = 294 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQM-ACSWDLPKNIENAEKLVRQAHAKGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 V + S I + + + F + NS+V++DA G+++ V K Sbjct: 60 VLAQELDN--SPLIKHFSKLAAELEVVLPLSFFERANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L QGAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALQGAEVIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P + + + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAFPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEASKFIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|168023764|ref|XP_001764407.1| predicted protein [Physcomitrella patens subsp. patens] gi|162684271|gb|EDQ70674.1| predicted protein [Physcomitrella patens subsp. patens] Length = 743 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 127/602 (21%), Positives = 213/602 (35%), Gaps = 136/602 (22%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +K+A LN D GN+A+ +++ EA G + EL + GY ED + Sbjct: 1 MRVVKLATCSLNQWAMDFEGNLARTKQSIREARNAGATFRVGPELELCGYGCEDHFLEGD 60 Query: 62 FIQ-ACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 ++ + + L SD + GIV +G P ++ N G I+ VR K+ L Sbjct: 61 TLKHSWECMAEILASDLTN---GIVCDIGLPVEECGVRYNCRAYCLDGQILLVRPKLYLA 117 Query: 119 NYSEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDI 153 N + E R F ++G P + F D + CE++ Sbjct: 118 NDGNYRELRWFSSWKRLRELETYQLPECIREVTGQETVPFGDGYLSFEDTGVASETCEEL 177 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-D 212 + S L G E + + + S + KL R E++ S +Y NQ G Sbjct: 178 FTPSAPHIGLSLGGVEIIANGSGSHHQLRKLNTRIELMQSATSKCGGVYMYANQQGCDGG 237 Query: 213 ELIFDGASF------------------------CFDGQQQLAFQ--MKHFSEQ------- 239 L +DG + C D +F+ + EQ Sbjct: 238 RLYYDGCACIMVNGDVVAQGSQFSMKDVEVVTACVDLDAVSSFRGTISSLREQASQEPRT 297 Query: 240 -NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + ++ + ++ N+ Y EE A AC L DY++++ ++ Sbjct: 298 PSIAVKFKLSRPMNMANHFPSLPIKVRYHDPYEEIALGPACWLW--DYLRRSGATGYLLP 355 Query: 299 LSGGIDSALCAAI------------------------------------AVDALGKENVQ 322 LSGG DS+ AAI + D + + Sbjct: 356 LSGGADSSSVAAIVGCMCQLVVKAVREGDKQVIADAIRMGNYRNDEVPESADEFAQRLLH 415 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ----------- 371 T+ + + +S + + A A +G + + I +V +L Sbjct: 416 TVYMGTENSSHATRDRAKRLAGEIGASHLNVNIDVVVKALLTLFESVFPGRKLRYKVHGG 475 Query: 372 EEPSGIVAENIQSRIRGNILMALSN-----HSKA---MLLTTSNKSEISVGYGTLYGDMS 423 + + +NIQ+RIR I L++ SK ++L ++N E GY T Y S Sbjct: 476 TQTENLALQNIQARIRMVIAFMLASLMPWVRSKPGFLLVLGSANVDEGLRGYLTKYDCSS 535 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-----HQT 478 NP+ + K + W + G G L EV P+AEL P QT Sbjct: 536 ADINPIGGISKGDIRAFLRW---GALNLGYGTLAEV-----EGAPPTAELEPITVKYTQT 587 Query: 479 DQ 480 D+ Sbjct: 588 DE 589 >gi|150376479|ref|YP_001313075.1| NAD synthetase [Sinorhizobium medicae WSM419] gi|150031026|gb|ABR63142.1| NAD+ synthetase [Sinorhizobium medicae WSM419] Length = 335 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 52/226 (23%) Query: 268 PLQ-EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 PL+ +E A+ + V LR ++ +++GLSGGIDS++ A+AV A+G +NV + + Sbjct: 16 PLKIDEAAETDRIVAGLRAQLRSLRKRGLVLGLSGGIDSSVSVALAVRAVGAKNVFCLFM 75 Query: 327 PYKYTSPQSL----------------EDAAACAKALGC--KYDVLPIHDLVNHFFSL--- 365 P + P+SL ED A+GC + D I +LV + Sbjct: 76 PENDSDPESLRLGRLIAETFGVEAVVEDIGPTLDAMGCYQRRDAF-IRELVPEYGQGWAS 134 Query: 366 --------------MSQFLQEEPSG---------------IVAENIQSRIRGNILMALSN 396 +S + ++P G + A N++ R R I ++ Sbjct: 135 KIVIANALEGDGYNISSLVVQDPDGQQTKLRMPPSVYLGIVAATNMKQRTRKQIEYFHAD 194 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 +L T N+ E G+ GD + P+ LYK+QV+ LA+ Sbjct: 195 RLNFAVLGTPNRLEYDQGFFVKNGDGAADVKPIAHLYKSQVYALAA 240 >gi|16265105|ref|NP_437897.1| NAD synthetase [Sinorhizobium meliloti 1021] gi|307309472|ref|ZP_07589128.1| NAD+ synthetase [Sinorhizobium meliloti BL225C] gi|25090778|sp|Q92TY6|NADE_RHIME RecName: Full=NH(3)-dependent NAD(+) synthetase gi|15141244|emb|CAC49757.1| NAD+ synthase [Sinorhizobium meliloti 1021] gi|306900057|gb|EFN30677.1| NAD+ synthetase [Sinorhizobium meliloti BL225C] Length = 334 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 54/232 (23%) Query: 261 SASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN 320 SA T+ I +E A+ + V LR ++ +++GLSGGIDS++ A+AV A+G +N Sbjct: 13 SADTLKI---DEAAEADRIVAGLRAQLRSLRKRGLVLGLSGGIDSSVSVALAVRAVGAKN 69 Query: 321 VQTIMLPYKYTSPQSL----------------EDAAACAKALGC--KYDVLPIHDLVNHF 362 V + +P + P+SL ED A+GC + D I +LV + Sbjct: 70 VFCLFMPENDSDPESLRLGRLVAETFGVEAVVEDIGPTLDAMGCYQRRDAF-IRELVPDY 128 Query: 363 FSL-----------------MSQFLQEEPSG---------------IVAENIQSRIRGNI 390 +S + ++P G + A N++ R R I Sbjct: 129 GPGWASKIVIANALEGDGYNISSLVVQDPEGKQTKLRMPPSVYLGIVAATNMKQRTRKQI 188 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++ +L T N+ E G+ GD + P+ LYK+QV+ LA Sbjct: 189 EYYHADRLNFAVLGTPNRLEYDQGFFVKNGDGAADVKPIAHLYKSQVYALAG 240 >gi|145508509|ref|XP_001440204.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124407410|emb|CAK72807.1| unnamed protein product [Paramecium tetraurelia] Length = 685 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 130/581 (22%), Positives = 210/581 (36%), Gaps = 123/581 (21%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +I + +N D N+ + E R+ + EL + GY ED + + Sbjct: 5 RIGVCTMNQFAMDFNYNLQNIIESIEICKRKQCLYRVGPELEVCGYMCEDHFLESDTVTH 64 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C A+ + H +G P + N VIL I +R KI L + + E Sbjct: 65 CWEALSEIL--LHTDNIVCDIGMPVIHKSVFYNCRVILLNKKIHLIRPKIYLADDGNYRE 122 Query: 126 KRTF------------------ISGYSNDPIVFR-----DIRLGILICEDIWKNSNICKH 162 R F I+G PI D +GI +CE++W Sbjct: 123 SRYFTPWSKEIEELELPTFIQKITGQKCVPIGVAILQTLDTEIGIEVCEEMWTPIPTSAS 182 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASF 221 GAE + + + S + K+K+R E+ + N G + L FDG S Sbjct: 183 QALDGAEIILNSSGSHFQIGKIKERTELFKDITKRNGACYAFCNLRGCDGNRLYFDGCS- 241 Query: 222 CFDGQQQLAFQMKHFSEQNF-MTEWHYDQQLSQWNYMSDDSASTMY-------------- 266 C ++ + FS ++ +T D Q + ++ S S M Sbjct: 242 CIVLNGKVFAKSDAFSLKDVEVTTCDIDLQEIRNIRINIKSRSLMASKQKHFPRIKLHIN 301 Query: 267 ------------IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV- 313 IP+Q E ++ L DY++++ ++ LSGG+DSA AI+V Sbjct: 302 LTQQQNYVYYRDIPIQYESEVEDSMACYLWDYLRRSGASGFMLPLSGGVDSA-ATAISVF 360 Query: 314 --------------DALG---------KENVQ------------------TIMLPYKYTS 332 D G ++ VQ T+ L + +S Sbjct: 361 YMANKIFKTISTIDDDYGSHHKVLNQLRQIVQDDQFSPKSPQEIVNKIFFTVYLGTQNSS 420 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI----------VAENI 382 P S + A+ +G ++ + I ++ N S + ++E+P I +NI Sbjct: 421 PDSKYRSQLLAEQIGSQHYEVNIDEICNACLSAIKPIVKEDPQFIANGGTLSEDLALQNI 480 Query: 383 QSRIRGNILMALS-----NHSKA---MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 Q+R R I L+ N+ K ++L +SN E G+ T Y S NP+ L K Sbjct: 481 QARSRMIITYLLAQLTPWNNGKQGFLIVLGSSNLDESLRGFLTKYDCSSADINPIGSLSK 540 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 + +L + S L ILE PS ELRP Sbjct: 541 NDLKELLDFCYKTFQFSAL--------KLILEAKPSPELRP 573 >gi|227829009|ref|YP_002830789.1| nitrilase/cyanide hydratase and apolipoproteinN-acyltransferase [Sulfolobus islandicus M.14.25] gi|227460805|gb|ACP39491.1| Nitrilase/cyanide hydratase and apolipoproteinN-acyltransferase [Sulfolobus islandicus M.14.25] Length = 270 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 29/254 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ+ GD+ N K E + D ++F EL ++GY +DL + + Sbjct: 3 IRVELAQIRSYPGDVDRNYKKHLEIIETST---ADCVIFPELSLTGYIIKDLTY-----E 54 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 A + + V G ++ ++G+L N+ ++ G + + K LP Y F Sbjct: 55 IYKDAEEATRKIAEKVNKCAVFGTIKEVRKGILRNAAAVIINGKMDYIY-KFYLPTYGLF 113 Query: 124 HEKRTFISGYSNDPIV------FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 E+R F G DP+ +RD++ G++ICED W I + L GA+ +F +AS Sbjct: 114 EERRYFQRG---DPLKDLKIFEYRDLKFGVVICEDAWHPEPI-EALSLMGADAIFIPSAS 169 Query: 178 PYYHNKLKKRHEIVTGQISHVH-------LPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 P KL++ I S + + ++ N VG Q+E F G S + Sbjct: 170 P--MRKLRENLAIEESWDSLLKAHSLMNTVWTVFTNVVGSQEEEYFWGGSRVVSPLGDVK 227 Query: 231 FQMKHFSEQNFMTE 244 ++ F E + E Sbjct: 228 LKLNLFYEDRGVVE 241 >gi|88800511|ref|ZP_01116074.1| NAD(+) synthetase [Reinekea sp. MED297] gi|88776742|gb|EAR07954.1| NAD(+) synthetase [Reinekea sp. MED297] Length = 323 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 79/243 (32%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS----------------LED 338 +++GLSGGIDS++CAA+AV A+G E V +M+P +S S LED Sbjct: 38 LVVGLSGGIDSSVCAALAVRAIGPERVLGLMMPEADSSDDSRKLADVLVQHLGIEAQLED 97 Query: 339 AAACAKALGC--KYD-----VLPIHD---------------LVNHFFSLMSQFLQEEPSG 376 A L C + D LP + L+NHF + E P G Sbjct: 98 ITATLDGLDCYRRRDEAIRIALPEYQSDWKSKIVLSGASQGLINHF-----TVVAESPDG 152 Query: 377 ---------------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + A N + R+R + ++ ++ T N+ E G+ GD Sbjct: 153 QRFEAALPLKAYLSIVAATNFKQRVRKTMEYFHADARNYAVVGTPNRLEYDQGFFVKNGD 212 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 + P+ LYK+QV+ +A + +P +I + +P+ TD Sbjct: 213 GAADIKPISHLYKSQVYAMARYLE--------------LPENICQTTPT-------TDTY 251 Query: 482 SLP 484 SLP Sbjct: 252 SLP 254 >gi|242014617|ref|XP_002427983.1| glutamine-dependent NAD synthetase, putative [Pediculus humanus corporis] gi|212512482|gb|EEB15245.1| glutamine-dependent NAD synthetase, putative [Pediculus humanus corporis] Length = 718 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 134/605 (22%), Positives = 223/605 (36%), Gaps = 137/605 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK- 59 M +K+ IA LN D GN+ + ++ +EA G EL ISGY +D ++ Sbjct: 1 MERKVTIAACSLNQWALDFEGNLERIIQSIQEAKEAGATYRSGPELEISGYSCQDHFYEG 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +F+ + + LK+ I VG P + N V+ I+ +R K+ L + Sbjct: 61 DTFLHSWEVLGELLKNPICK-DILIDVGMPVMHKNVAYNCRVVFLNRQILLIRPKLLLCD 119 Query: 120 YSEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIW 154 + E R F I+ + P I +D +G ICE++W Sbjct: 120 DENYRESRWFTPWRKPQQIEDFTLPTNIRSITQQTTVPFGDAVIATKDTCIGYEICEELW 179 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPI----IYVNQVGG 210 ++ L G E + + +AS + L+K + +V I L ++ N G Sbjct: 180 NPNSSHIPLSLDGVEIIVNGSAS---YVSLRKTY-VVVNLIKSATLKCGGCYLFSNLRGC 235 Query: 211 QDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW---------HYDQQLSQWNYM---- 257 E ++ C ++ + K F+ Q+ Y + +Y+ Sbjct: 236 DGERVYFNGCSCISINGEIINRSKQFTLQDVEVITATIDLEDIRAYRNAIRSRSYVSAGS 295 Query: 258 -------------SDDSASTMYIPL-------QEEEADYNACVLSLRDYVQKNNFHKVII 297 SDD Y P+ +EE A AC L DY++++ + Sbjct: 296 RAYPRINVDFFLSSDDFFLPCYEPIEWIYHTPEEEIALGPACW--LWDYLRRSKQGGFFL 353 Query: 298 GLSGGIDSALCAAIA-------VDAL--GKE----NVQTIMLPYKYTSPQSLE------- 337 LSGG+DS A I V A+ G E +V+ I+ + YT S E Sbjct: 354 PLSGGVDSTSTACIVFSMCRLIVQAIQTGDEQVLSDVRKIVCDFSYTPTSSKELCGRIFH 413 Query: 338 ---------------DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS------- 375 A A +G + + I VN + + P Sbjct: 414 TCYMRSENSSVETRMRAEKLASEIGSYHLNISIEPAVNAVIRIFTGCTSRVPKFSLEGGS 473 Query: 376 ---GIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSG 424 + +NIQ+R+R +++ + N S +L L ++N E GY T Y S Sbjct: 474 PRESLALQNIQARLRMVLSYLFAQLILWVRNRSGGLLVLGSANVDEALRGYMTKYDCSSA 533 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQT 478 NP+ + KT + + + + L L E+I +P+AEL P QT Sbjct: 534 DINPIGGISKTDLRKFLVYAKTK---FSLNILDEII-----NATPTAELEPLKDGKLAQT 585 Query: 479 DQESL 483 D+E + Sbjct: 586 DEEDM 590 >gi|15966249|ref|NP_386602.1| hypothetical protein SMc01962 [Sinorhizobium meliloti 1021] gi|307307717|ref|ZP_07587446.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sinorhizobium meliloti BL225C] gi|307317377|ref|ZP_07596817.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sinorhizobium meliloti AK83] gi|15075519|emb|CAC47075.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306896966|gb|EFN27712.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sinorhizobium meliloti AK83] gi|306901583|gb|EFN32185.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sinorhizobium meliloti BL225C] Length = 259 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 8/225 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A Q+ + GD+A N+A+ RA A+ +G L++ EL I+GY + + ++ Sbjct: 2 MKFAALQMKSIGGDVAANLARIERAAIGASGEGASLLVAPELAITGYGAGEAI-RRLAEP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + L + G IV GF Q + V NS V +D + V K +L Y ++ Sbjct: 61 ADGRIVRELGRISLKTGIAIVAGFAEQGADAVYNSAVHVDGDAVPVVYRKSHL--YGDYE 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-YHNK 183 + S R + G+LIC D+ N+ + L GA+ + A P + Sbjct: 119 RSLFTPAEPSTRLFKHRGVTCGMLICYDVEFPENV-RRLALAGADAVLVPTALPAGWSGT 177 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQ 226 H I T + + + YVN G D F G S DGQ Sbjct: 178 FITDHMIQTRAFEN-QVFVAYVNHCGSDDMFSFAGLSLIASPDGQ 221 >gi|197117472|ref|YP_002137899.1| NAD synthetase [Geobacter bemidjiensis Bem] gi|197086832|gb|ACH38103.1| NAD+ synthetase [Geobacter bemidjiensis Bem] Length = 328 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 66/248 (26%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS----------------LED 338 +++ LSGGIDS++ AA+AV A+GKE V + +P +++S +S LE+ Sbjct: 39 LVVALSGGIDSSVTAALAVRAIGKERVIGLEMPERHSSGESQKLSGKLAAALGIETVLEE 98 Query: 339 AAACAKALGC--KYD-----VLP-----------IHDLVNH-FFSLMSQFLQEEPSG--- 376 +A +A+GC KYD V+P I + + H F+ Q+ G Sbjct: 99 ISAALEAVGCYRKYDEAVRMVVPGYGEGWKSKIVISNNMEHPGFTSFYLVAQDGAQGTTR 158 Query: 377 -----------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + A N + RIR + ++ + T N+ E G+ GD + Sbjct: 159 VRLPFKPYLQIVAATNFKQRIRKMLEYYHADRLNFAVAGTPNRLEYDQGFFVKLGDGAAD 218 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-- 483 P+ LYK+QV+QLA + LG +P I ++P+ + Q+ Sbjct: 219 IKPIAHLYKSQVYQLAEY---------LG-----VPEEIRRRTPTTDTYSLAQGQDEFYF 264 Query: 484 -PPYPILD 490 PYP +D Sbjct: 265 SLPYPEMD 272 >gi|46126041|ref|XP_387574.1| hypothetical protein FG07398.1 [Gibberella zeae PH-1] Length = 689 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 119/554 (21%), Positives = 201/554 (36%), Gaps = 116/554 (20%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN V D GN+ + R++ A G L EL I+GY D + Sbjct: 1 MADLITLATCSLNQWVLDWEGNLGRIRKSIILAKEAGATLRTGPELEITGYGCLDHFLEA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ + +DT G I VG P + N I+ G ++ +R KI L N Sbjct: 61 DVYDHSLESLLAILTDTELHGILIDVGLPLMHRGCRYNCRAIILDGKLLCLRPKIYLAND 120 Query: 121 SEFHEKRTF--------ISGYSNDPIV-----FRDIRLGILI------------CEDIWK 155 F E R F + Y+ P + R + +G +I CE+++ Sbjct: 121 GNFRENRFFTPWNRPRYVEQYNLPPALQKHQGVRQVPIGDVILSLNDTTVAAETCEELFT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 ++ G E + + S + KL +R +++ +Y NQ G D L Sbjct: 181 PQAPHINMALNGVEIFTNSSGSHHTLRKLNERLALISEATRKSGGVYLYANQSGSDGDRL 240 Query: 215 IFDGASFCFDGQQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEE 272 ++DG+S +A Q FS + +T +++ + + + + P+ E Sbjct: 241 LYDGSSLIMVNGNIVA-QGSQFSLDDVEVITATVDLEEVRAYRFAPSRNFQAVQAPVYER 299 Query: 273 -EADYNACVLSLR----------------------DYVQKNNFHKVIIGLSGGIDSALCA 309 E D++ V L V+++ ++ LSGGIDS A Sbjct: 300 IEVDFSLGVEDLDLLRAPTPPRPARYHVPEEEIALVLVRRSKASGYLVPLSGGIDSCATA 359 Query: 310 AI-------AVDALGKENVQTIM-----------LP------------------YKYTSP 333 I V A+ N + I LP K +S Sbjct: 360 TIVFSMCRLVVAAIKAGNEEVIADVKRIAVYSDKLPETAEEFCNQIFHTVYMGMEKQSSK 419 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------GIVAENIQ 383 ++ + A + +G + + I D N +L++Q EP + +NIQ Sbjct: 420 ETRQRAKDLSARIGSYHTDMNIDDTFNATKNLLTQATGFEPKFKVHGGSATENLALQNIQ 479 Query: 384 SRIRGNILMALSNHSKAML--------------LTTSNKSEISVGYGTLYGDMSGGFNPL 429 +R R M ++ + ML L +SN E GY T Y S NP+ Sbjct: 480 ARSR----MVVAYYYAQMLPTVRQRPGGGSLLVLGSSNVDECLRGYLTKYDCSSADVNPI 535 Query: 430 KDLYKTQVFQLASW 443 + KT + + +W Sbjct: 536 GSVSKTDLKRFIAW 549 >gi|150397605|ref|YP_001328072.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sinorhizobium medicae WSM419] gi|150029120|gb|ABR61237.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sinorhizobium medicae WSM419] Length = 258 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 10/219 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q+ GD+A N+A+ RA +A+ +G L++ EL I+GY + + + + Sbjct: 1 MKLAVLQMKSTGGDVAANLARIGRAAIDASGKGATLLVAPELAITGYGAGEAIVELAE-P 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L+ + G I+ GF Q V NS V +D V K +L Y ++ Sbjct: 60 PDGPIVQELRRISRQTGTAIIAGFAEQSGHTVYNSAVHVDGDTAPTVYRKSHL--YGDY- 116 Query: 125 EKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-YH 181 +R+ S +F R + G+LIC D+ N+ + L GA+ + A P + Sbjct: 117 -ERSLFSPAEPSTRLFEHRGVTCGMLICYDVEFPENV-RRLALAGADAVLVPTALPAGWS 174 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 H I T + + + Y N G D F G S Sbjct: 175 GTFIAEHMIQTRAFEN-QVFVAYANHCGSDDMFSFAGMS 212 >gi|256383987|gb|ACU78557.1| NAD+ synthetase [Mycoplasma mycoides subsp. capri str. GM12] gi|256384819|gb|ACU79388.1| NAD+ synthetase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455770|gb|ADH22005.1| NAD+ synthetase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 245 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 35/203 (17%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K V++G+SGGIDSA+ A +A A N T+ +P Y+S + Sbjct: 20 VKKAKCDGVVVGISGGIDSAVVANLAKLAF-PNNYLTVWMPI-YSSQLDYD--------- 68 Query: 347 GCKYDVLPIHDLVNHFFSLMSQF---------LQEEPSGIVAENIQSRIRGNILMALSNH 397 C +++ + L N +L + F L E+P+ + N ++R+R L ++ Sbjct: 69 -CANELIKTNQLKNIEVNLEASFDAFKNSFSNLDEKPNLLAISNAKARLRMTTLYTIAQT 127 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 K ++L T N E +GY T YGD P+ L K++V + A N Sbjct: 128 KKYLVLGTDNLDEWHIGYFTKYGDGGVDVVPIIHLLKSEVKKAAQILN------------ 175 Query: 458 EVIPPSILEKSPSAELRPHQTDQ 480 +P I+ + P+A L QTD+ Sbjct: 176 --VPEIIINRKPTAGLWEGQTDE 196 >gi|326473860|gb|EGD97869.1| hypothetical protein TESG_08521 [Trichophyton tonsurans CBS 112818] Length = 831 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 124/587 (21%), Positives = 208/587 (35%), Gaps = 129/587 (21%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L D GN + + +A G L + EL I GY D F+ C Sbjct: 7 VATCSLRNWALDFEGNTKRIIESIHKAKAAGATLRVGPELEICGYSCLDHFFEADLYLHC 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + D G + +G P + N +I G I+ +R K+ L N + E Sbjct: 67 WEMLCIILKDRSCDGILLDIGMPVMHRNNRFNCRIICLDGKILLIRPKLWLANDGNYREM 126 Query: 127 RTFISGYSND-------PIVFRDIR------------------LGILICEDIWKNSNICK 161 R FI + P + R+I+ +G+ CE+++ + Sbjct: 127 RHFIPWVAPRHVEEYYLPRMVREIQGTTKVPIGDAVISTADTCIGVETCEELFTPQSPHN 186 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGAS 220 + G E + + + S + KL R ++ +Y N +G D L FDG++ Sbjct: 187 DMSLNGVEIMANSSGSHHTLRKLDVRVSLIMEATRKNGGVYLYANHLGCDGDRLYFDGSA 246 Query: 221 FCFDGQQQLA------------------------FQMKHFSEQNFMTEWHYDQQLSQWNY 256 +A ++ M Y + ++++ Sbjct: 247 MIIVNGNLVAQGNQFTLDDVDVVTAVVDLEEVRSYRCTPSRGHQAMKAGVYTRVETEFSL 306 Query: 257 MSD--DSASTM---------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 SD D + + Y + E A C L DY++++ ++ LSGGIDS Sbjct: 307 SSDIGDRDTRLRPSPVIQPRYYSPEAEIALSTGCWLW--DYLRRSGTAGYLVPLSGGIDS 364 Query: 306 ALCAA-------IAVDALGKENVQ-----------TIMLP------------------YK 329 A + +DA+ N Q T+ LP K Sbjct: 365 CATAMTVFSMCQLVIDAINAGNSQVIKDCKRLADYTLELPKTPQELCNQVFHTIYMGMSK 424 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------GIVA 379 +S ++ A +KA+G + L I ++ +L+ ++L +P ++ Sbjct: 425 QSSKETRGRAQDLSKAIGSYHVDLDIDEVYEAQKNLVVKYLDFDPKFKSQGGTNAENLML 484 Query: 380 ENIQSRIR-------GNILMALSN--HSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPL 429 +NIQ+R R IL H A+L L ++N E GY T Y S NP+ Sbjct: 485 QNIQARSRMVTAYEFAQILPTTRKRPHGGALLVLGSANAGEALRGYYTKYDCSSADINPI 544 Query: 430 KDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 L K + +W S+ I G LE +P+AEL P Sbjct: 545 GGLDKRDLKLFIAWAEKSYSIPCLRG---------FLEATPTAELEP 582 >gi|255724018|ref|XP_002546938.1| glutamine-dependent NAD(+) synthetase synthase [glutamine-hydrolyzing] [Candida tropicalis MYA-3404] gi|240134829|gb|EER34383.1| glutamine-dependent NAD(+) synthetase synthase [glutamine-hydrolyzing] [Candida tropicalis MYA-3404] Length = 714 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 133/597 (22%), Positives = 217/597 (36%), Gaps = 139/597 (23%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + +EA RQG L + EL + GY D + Sbjct: 5 ITVATCNLNQWALDFEGNRDRILESIKEAKRQGATLRVGPELEVCGYGCLDHFAENDIYH 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + ++ G + +G P + N +I G I+ +R K+ L N + Sbjct: 65 HSWEIYGEIIANPETHGIVLDIGMPIIHKSIKYNCRIISYNGEILLIRPKLYLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSNDPIVFRDI-------RLGILICEDIWKNS 157 E R F I+G S ++F D RLG CE+++ + Sbjct: 125 EMRYFTAWNRPKYYEDYQLPKFISKITGQSR--VIFGDCIIQTLETRLGCETCEELFTPN 182 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIF 216 + + G E + + S + KL R +++T +Y NQ G D L + Sbjct: 183 SPHIAMALDGVEIFTNSSGSHHELRKLDTRLKLITEATKKCGGIYLYANQKGCDGDRLYY 242 Query: 217 DG-ASFCFDGQ---QQLAFQMKH---------------FSEQNFMTE-----------WH 246 DG AS +G Q F +K + Q + + Sbjct: 243 DGCASIIVNGNVLAQASQFSLKDVEVISATVDLDDVRAYRNQKSASAQAVNQVEKFKVLY 302 Query: 247 YDQQLSQWNYMSDDSASTM-------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 D +LS +Y+ D + ++P +EE A AC L DY++++ + L Sbjct: 303 TDIELSPSDYLFDPTVMPTKPQPIKYHLP-EEEIALGPACW--LWDYLRRSKCGGYFLPL 359 Query: 300 SGGIDSALCAAI-------AVDALGKE-----NVQTI-----MLPYK---------YTSP 333 SGGIDS A I V+A+ + ++Q I +P Y+S Sbjct: 360 SGGIDSCATAVIVHSMCRLVVEAIPHDKQVLKDIQAITHDDTFVPKTPQEIAERIFYSSF 419 Query: 334 QSLEDAAA--------CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 E+++A A +G + L + +LV SL ++P Sbjct: 420 MGTENSSAETRSRSKELAAKIGSYHVDLNMDNLVGAVVSLFEVATGKKPIFKIFGGSQTE 479 Query: 376 GIVAENIQSRIRGNILMALS-------------NHSKAMLLTTSNKSEISVGYGTLYGDM 422 + +NIQ+R+R M LS N ++L ++N E GY T Y Sbjct: 480 NLALQNIQARLR----MVLSYLFAQLLPWTRGKNVPGLLVLGSANVDECLRGYLTKYDCS 535 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 S NP+ + KT + + +W I L +P+AEL P D Sbjct: 536 SADINPIGGISKTDLKRFIAWAEDK--------FELPILHDFLTATPTAELEPITKD 584 >gi|118592239|ref|ZP_01549632.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Stappia aggregata IAM 12614] gi|118435211|gb|EAV41859.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Stappia aggregata IAM 12614] Length = 258 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 10/219 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q GDI ++ A G +++F ELF+ GY D+ +S Q Sbjct: 1 MKLALYQGPATCGDIEAGFSRLETQLTAAAMAGASMVVFPELFLPGYNRPDM--HQSLAQ 58 Query: 65 ACSSA-IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE 122 + L G G+ VG+ + E V N+ +G + KI L + E Sbjct: 59 PLGGEWCERLSKLAQKAGCGLTVGWSERCDEAVYNAATAFGTSGEQLGHYRKIQL--FGE 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 EK +F G F + +LIC D+ + C+ L +QG + A+P Sbjct: 117 M-EKASFNFGTQYTVFEFGGRKTALLICYDV-EFPQHCRRLAEQGVSLVLVPTANPQRFE 174 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 + H V + + L I+Y N G ++ F G S Sbjct: 175 HVS--HTFVPARAAEAGLTIVYANFFGADGDITFGGHSL 211 >gi|114799306|ref|YP_761674.1| carbon-nitrogen family hydrolase [Hyphomonas neptunium ATCC 15444] gi|114739480|gb|ABI77605.1| hydrolase, carbon-nitrogen family [Hyphomonas neptunium ATCC 15444] Length = 280 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 25/277 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M + + +A Q P D+ NI + EA +G D+IL ELF Y E+ Sbjct: 1 MTRTITLAAIQFTPT-DDVQENIDRVAGFVREAAAKGADVILPPELFCGYYFCKTQEEEH 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F ++F A+ L + G I V ++ NS+V++DA G + V K + Sbjct: 60 FARAFEWQDHPAVHQLSDLAAELGVVIPVSIYEKEGPHYFNSIVVIDADGAPLGVYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFR-----DIRLGILICEDIWKNSNICKHLKKQGAEFL 171 +P+ + EK F G + FR R+G+ IC D W + + GA+ L Sbjct: 120 IPDGPGYQEKYYFRPGDTG----FRVWNTMKGRIGVGICWDQW-FPEAARSMALMGADVL 174 Query: 172 F---SLNASPY---YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 ++ A P + R + +++V +P++ N+VG + +F G SF D Sbjct: 175 LYPTAIGAEPQDASLDTAARWRRGMQGHAVANV-IPVVAANRVGDEQGQVFYGTSFITDE 233 Query: 226 QQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSD 259 ++A + E + + H D+ + W + D Sbjct: 234 TGEIAADLDRKEEGVIVATFDLEHIDRARAAWGFFRD 270 >gi|326797764|ref|YP_004315583.1| N-carbamoylputrescine amidase [Sphingobacterium sp. 21] gi|326548528|gb|ADZ76913.1| N-carbamoylputrescine amidase [Sphingobacterium sp. 21] Length = 289 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 34/282 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K+KI Q++ V D A N+AKA + A +G +I ELF S Y ++ + + Sbjct: 1 MSKVKIGTVQMS-CVADKATNLAKAIEQVKVAAEKGAQIICLQELFTSLYFCDEENYD-N 58 Query: 62 FIQACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 F+ A + + D L + I+ + +G+ N+ ++DA G + K++ Sbjct: 59 FVLAEAIPGPSTDALSKVAAEYQVVIIASLFEKRAQGLYHNTTAVIDADGTYLGKYRKMH 118 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 +P+ F+EK F G VF+ ++GILIC D W + GAE LF Sbjct: 119 IPDDPGFYEKFYFTPG-DLGYKVFKTKFAKIGILICWDQWY-PEAARITALMGAELLFYP 176 Query: 175 NASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 A + + +++ H I G +P++ VN+VG + + F G S Sbjct: 177 TAIGWALTQDAGTNEEQYNAWQTIQRSHAIANG------IPVVSVNRVGIEAGVRFWGGS 230 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSD 259 F + L ++ H E+ +TE +Q S W ++ D Sbjct: 231 FIANPFGALVYKASHEDEETVVTEVDLNQSDYYRSHWPFLRD 272 >gi|164659430|ref|XP_001730839.1| hypothetical protein MGL_1838 [Malassezia globosa CBS 7966] gi|159104737|gb|EDP43625.1| hypothetical protein MGL_1838 [Malassezia globosa CBS 7966] Length = 706 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 132/606 (21%), Positives = 211/606 (34%), Gaps = 149/606 (24%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK- 60 + +L ++ LN D GN + R+ E A G L + EL I GY D + Sbjct: 1 MTRLTVSTCSLNQWALDFDGNRDRIVRSIELAKSAGSTLRIGPELEIPGYGCYDHFLESD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + + + L+SD +G +G P + N + + ++ +R KI L N Sbjct: 61 TELHSWQVLAEILQSDVTNG-ILCDLGMPVSHGSVLYNCRIAVMNRRVLHIRPKIWLAND 119 Query: 121 SEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWK 155 + E R F I+G ++ PI D LG+ +CE+++ Sbjct: 120 GNYREMRFFSPWMRLGHTESHKLPSFITDITGQTHVPIGDALLATCDTVLGVELCEELFT 179 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 ++ GAE + + + S + KL +R E++ + +Y NQ G D L Sbjct: 180 AASPHITHALSGAEIILNSSGSHHELRKLHRRVELIREATLKLGGVYLYANQRGCDGDRL 239 Query: 215 IFDGASF--------------------------------------------CFDGQQQLA 230 +DG + C A Sbjct: 240 YYDGCALIAVNGDIVAQGDQFGLDDVDVVTATVDLADVRAHRTSKSRGMQACALAAGNSA 299 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL-------QEEEADYNACVLSL 283 M H D + + + D + T+ PL +EE A AC L Sbjct: 300 LHMGHGGPARV------DVPMKMTHGLIDKPSLTLSKPLDVHYYKPEEEIALGPACWL-- 351 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVD-------ALGKENVQTIM---------LP 327 DYV+++ ++ LSGGIDS A I A K N Q I P Sbjct: 352 WDYVRRSRTQGFLLPLSGGIDSCATAVIVHSMCRLVHAACEKGNDQVIKDMRQVTGTSEP 411 Query: 328 YKYTSPQSLED--------------------AAACAKALGCKYDVLPIHDLVNHFFSLMS 367 + +SPQ+L + A+ AKA+G + I +V +L S Sbjct: 412 WLPSSPQALAERLFVTCYMGTTNSSQATRGRASELAKAIGSYHYAFDIDSVVTALLNLFS 471 Query: 368 QFLQEEP-----SGIVAE-----NIQSRIRGNILMALSNHSK--------AMLLTTSNKS 409 + P G AE NIQ+R R + + + ++L ++N Sbjct: 472 FVTKRTPRFKIHGGTTAENLALQNIQARSRMVLAYLFAQLAPWVQGRTGGLLVLGSANVD 531 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E GY T Y + + NP+ + K + + GL L S L P Sbjct: 532 ESLRGYLTKYDNSAADLNPIGSISKNDLRSFIGYAEK---AMGLPVLA-----SFLSAPP 583 Query: 470 SAELRP 475 +AEL P Sbjct: 584 TAELEP 589 >gi|125981173|ref|XP_001354593.1| GA22140 [Drosophila pseudoobscura pseudoobscura] gi|195165447|ref|XP_002023550.1| GL19852 [Drosophila persimilis] gi|54642903|gb|EAL31647.1| GA22140 [Drosophila pseudoobscura pseudoobscura] gi|194105684|gb|EDW27727.1| GL19852 [Drosophila persimilis] Length = 789 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 134/601 (22%), Positives = 230/601 (38%), Gaps = 138/601 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN+A+ ++ EA G EL +SGY ED F++ Sbjct: 1 MGRKITVAVSTLNQWALDFEGNLARILQSILEAKDMGASYRTGPELEVSGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +++ + ++ + S + + VG P + N V ++ +R K+ + Sbjct: 60 PDTYLHSWEVLLEIMMSPICENML-VDVGMPVMHRNVAYNCRVAFFNRQLLLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD LG ICE++ Sbjct: 119 DDGNYRESRWFTAWTKSMQTEEFLLPRMISQHTGQQTVPFGDAVIATRDTCLGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL----PIIYVNQVG 209 W + KH++ A +N S Y +L+K H I + I + ++ N G Sbjct: 179 WNVRS--KHIEMSLAGVEVIVNGSGSYM-ELRKAH-ITSDLIRNASFKAGGAYLFSNLRG 234 Query: 210 GQDELI-FDGAS-FCFDGQ-----QQLAFQ-------------------------MKHFS 237 + + F+G S +G+ QQ A Q S Sbjct: 235 CDGQRVYFNGCSAIALNGELLARGQQFALQDVEVTLATIDLEEIRAYRVSLRSRCTAAAS 294 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKNNFHK 294 N+ H D ++S + + S ++ P +EE A AC L DY++++ Sbjct: 295 AANY-PRIHCDFEMSTHSDIFKTSTPPLHWPSHTPEEEIALGPACWLW--DYLRRSGQGG 351 Query: 295 VIIGLSGGIDSALCAAI----------AV---DALGKENVQTIMLPYKYT---------- 331 + LSGGIDS+ A I AV DA +++ I+ +YT Sbjct: 352 FFLPLSGGIDSSSSATIVHSMCRQIVQAVQLGDAQVLHDIRKILADTEYTPDNAATLCNR 411 Query: 332 ------------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----- 374 S ++ AA A LG + + I VN + + P Sbjct: 412 LLVTCYMGSVNSSKETRRRAAQLANQLGSYHIEISIDLAVNALLGIFNAVTGLTPRFRTQ 471 Query: 375 -----SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGD 421 + +NIQSR+R +++ + N +L L ++N E GY T Y Sbjct: 472 GGCARQNLALQNIQSRLRMVLAYIFAQLMLWVRNRPGGLLVLGSANVDESLRGYLTKYDC 531 Query: 422 MSGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 S NP+ + KT + + + + + + P+ E SI+E P+AEL P Q + Sbjct: 532 SSADINPIGGISKTDLRRFLIYAKEKYNL-----PVLE----SIIEAPPTAELEPLQENG 582 Query: 481 E 481 E Sbjct: 583 E 583 >gi|150864127|ref|XP_001382833.2| glutamine-dependent NAD(+) synthetase [Scheffersomyces stipitis CBS 6054] gi|149385383|gb|ABN64804.2| glutamine-dependent NAD(+) synthetase [Scheffersomyces stipitis CBS 6054] Length = 713 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 137/593 (23%), Positives = 217/593 (36%), Gaps = 132/593 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA LN D GN + + +EA RQG L + EL + GY D + Sbjct: 5 ITIATCNLNQWALDFEGNRDRILESIKEAKRQGARLRVGPELEVCGYGCLDHFSENDLYD 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +D + +G P + N +I G I+ +R K+ L N + Sbjct: 65 HSWETYGQILADPATHDILLDIGIPIIHKSIKYNCRIISYNGQILLIRPKLYLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSNDPIVFRDI-------RLGILICEDIWKNS 157 E R F I+G + + F D RLG CE+++ Sbjct: 125 EMRYFTPWNRPKYYEEYQLPKFIAKITG--QNRVTFGDCIVETLETRLGCETCEELFTPE 182 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIF 216 + + G E + + S + KL R +++T +Y NQ G D L + Sbjct: 183 SPHIAMALDGVEIFTNSSGSHHELRKLDTRLQLITEATEKCGGVYLYANQKGCDGDRLYY 242 Query: 217 DG-ASFCFDGQ-----QQLAFQ-------------------MKHFSEQNFMTEWHY---- 247 DG AS +G+ Q + Q K S Q Y Sbjct: 243 DGCASIIVNGKMVAQGSQFSLQDVEVISATIDLDDVRSYRNQKSASNQAVNQSSTYKAIQ 302 Query: 248 -DQQLSQWNYMSDDS-ASTMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 D +LS +++ D + T P+ +EE A AC L DY++++ + LS Sbjct: 303 TDVELSPSSHVFDPTIIPTKTRPIKFHLPEEEIALGPACW--LWDYLRRSKCGGYFLPLS 360 Query: 301 GGIDSALCA-AIAVDALGKENVQTIMLPYKYTSPQSL----------------------- 336 GGIDS CA A+ V ++ + V +I P T Q+L Sbjct: 361 GGIDS--CATAVIVHSMCRLVVASISDPQVLTDIQALTHDPSFVPKTPQEIAEKLFYTSF 418 Query: 337 ---EDAAA--------CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 E+++A A +G + L + +LV+ SL + P Sbjct: 419 MGTENSSAETRSRAKELASKIGSYHVDLNMDNLVSSVVSLFEVATGKRPIFKIFGGSQTE 478 Query: 376 GIVAENIQSRIR-------GNILMALSNHSKA--MLLTTSNKSEISVGYGTLYGDMSGGF 426 + +NIQ+R+R +L S A ++L ++N E GY T Y S Sbjct: 479 NLALQNIQARLRMVLSYLFAQLLPWTRGKSSAGLLVLGSANVDECLRGYLTKYDCSSADI 538 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + +W I L L + I +P+AEL P D Sbjct: 539 NPIGGISKTDLKRFIAWAE---INFELPILNDFI-----TATPTAELEPITAD 583 >gi|330968169|gb|EGH68429.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 268 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P+ DI+GN+A+ + A Q L++ E+F++GY + Sbjct: 1 MRIALYQCPPLPLDISGNLARLEQQAVSAVAQSAQLLICPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 SA + + G I+ G+P +D + + N+V ++D ++L NY + Sbjct: 61 HDGSAAMRIAAIAKANGIAILYGYPERDTDQQIYNAVQLID-------EHGVSLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFSAGADYFPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 +PY + ++ R H ++Y N G + E+ + G +S C DG + L Sbjct: 173 MAPYDFVCEVTVRARAFEN-----HCYVVYANYCGSEGEIRYCGLSSLCAPDGSRPL 224 >gi|296135887|ref|YP_003643129.1| NAD+ synthetase [Thiomonas intermedia K12] gi|295796009|gb|ADG30799.1| NAD+ synthetase [Thiomonas intermedia K12] Length = 332 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 58/204 (28%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS--------------- 335 N V++GLSGG+DS++CAA+AV ALG + V +++P + +S S Sbjct: 34 NKRGVVLGLSGGVDSSVCAALAVRALGPQRVFGLLMPERDSSDSSASLGGLVAQQLGIEY 93 Query: 336 -LEDAAACAKALGCK-------YDVLPIHDL---------------VNHFFSLMSQFLQE 372 +E+ A +A+GC VLP ++ +NHF + + + Sbjct: 94 TVENIAPALEAIGCYRWRDEAVRAVLPGYNAQWKIKLAISGGLAGGINHF-----KIIAQ 148 Query: 373 EPSG---------------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 P G + A N + R+R + ++ ++ T N+ E G+ Sbjct: 149 APDGQMHEARLPLREYLQIVAATNHKQRLRKTLEYFHADRLNYAVIGTPNRLEYDQGFFV 208 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLA 441 GD S P+ LYKTQV+ LA Sbjct: 209 KNGDGSADLKPIAHLYKTQVYALA 232 >gi|156740507|ref|YP_001430636.1| NAD synthetase [Roseiflexus castenholzii DSM 13941] gi|156231835|gb|ABU56618.1| NAD+ synthetase [Roseiflexus castenholzii DSM 13941] Length = 342 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 54/202 (26%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS----------------LED 338 V++G+SGGIDS++ A+ V A G + V +M+P + + PQ+ LED Sbjct: 36 VVLGISGGIDSSVALALCVRAFGPQRVAALMMPERDSDPQTLHLSEMVARHYGVEPILED 95 Query: 339 AAACAKALGC-------------KYD---------VLPIH----DLVNHFFSL------- 365 + C +YD VLP + D +N FSL Sbjct: 96 ITPALEGFDCYRRRDEAVRRIFPEYDAAHGYTMRIVLPQNLLDTDTLN-VFSLEIITPDG 154 Query: 366 ---MSQFLQEEPSGIV-AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + E + IV A N + R R I+ + ++ T NK+E G+ YGD Sbjct: 155 EVKRKRLPPREYAQIVAASNFKQRTRMAIVYYHAELRHYAVVGTPNKNEHDQGFFVKYGD 214 Query: 422 MSGGFNPLKDLYKTQVFQLASW 443 S P+ LYKTQ++QLA + Sbjct: 215 GSADLRPIVHLYKTQIYQLARY 236 >gi|193216641|ref|YP_001999883.1| NH(3)-dependent NAD+ synthetase [Mycoplasma arthritidis 158L3-1] gi|193001964|gb|ACF07179.1| NH(3)-dependent NAD+ synthetase [Mycoplasma arthritidis 158L3-1] Length = 256 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 33/253 (13%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V N + +G+SGGIDS+L A I + + TI + + S + L Sbjct: 35 VTSANQKGISLGISGGIDSSLLAVIC------KQIPTIKTYFYHFKTSSNPEIERNINLL 88 Query: 347 GCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 K+D+ + DL + F SL S+ S V N++SR+ + L ALS ++ ++ T Sbjct: 89 AKKFDLNIETIDLSDEFNSLTSKL--SINSNQVLGNLKSRLYMSSLYALSQKNETLVCGT 146 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 N E +GY T YGD P+ ++ K+ V+ LA+ LG +P I+ Sbjct: 147 DNYDEHFLGYFTKYGDGGCDILPIANIKKSDVYALANM---------LG-----VPDEII 192 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGS 525 ++ PSA+L +Q+D+ L E E ++ + + E + H S Sbjct: 193 DRKPSADLCENQSDEGDLG----------FSYETFEKWLIDPNLVSKEIADSITHYHKIS 242 Query: 526 EYKRRQAPVGTKI 538 +KR + P G K+ Sbjct: 243 NHKRLEIPRGPKL 255 >gi|94039613|dbj|BAE93575.1| NAD synthase NadE [Porcelain vine witches'-broom phytoplasma] Length = 131 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 4/133 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KK I I +P + + + A + N+ +LF EL +S Y DL F+ Sbjct: 1 MYKKGSIKIELASPPL-TVGNPLKNAYSMQNVLNKSKASFVLFPELCLSSYTAGDLFFET 59 Query: 61 SFIQACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +F++ A+D LK+++ +G ++G P E + N VI+ I+ + K +PN Sbjct: 60 TFLEQNFQALDWLLKNNSFEGV--YILGMPLALHEVLFNVAVIIQKDKILGITPKKTIPN 117 Query: 120 YSEFHEKRTFISG 132 Y EF EKR F SG Sbjct: 118 YKEFSEKRWFQSG 130 >gi|110635214|ref|YP_675422.1| NAD synthetase [Mesorhizobium sp. BNC1] gi|110286198|gb|ABG64257.1| NH(3)-dependent NAD(+) synthetase [Chelativorans sp. BNC1] Length = 330 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 52/232 (22%) Query: 261 SASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN 320 S +T+ I + A+ V +LR+ ++ +++G+SGGIDS++ A+AV A+G +N Sbjct: 8 SVATLAI---DPAAEVERIVAALREQLRSLRKRGLVLGVSGGIDSSVSTALAVRAVGAKN 64 Query: 321 VQTIMLPYKYTSPQSL----------------EDAAACAKALGC--KYD-----VLP--- 354 V + +P + P+SL ED +A+GC + D ++P Sbjct: 65 VCCLFMPENDSDPESLELGRLLTNTFGIEGIVEDIGPALRAIGCYERRDGFIRKLVPDYG 124 Query: 355 --------IHDLVNHFFSLMSQFLQEEPSG---------------IVAENIQSRIRGNIL 391 I + + +S + ++P G + A N++ R R I Sbjct: 125 PGWASKIVISNALEGAAYNISWLVVQDPEGNQSRHRMTPEVYLGIVAATNMKQRTRKQIE 184 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 ++ +L T N+ E G+ GD + P+ LYK+QV+QLA + Sbjct: 185 YYHADRLNFAVLGTPNRLEYDQGFFVKNGDGAADVKPIAHLYKSQVYQLAEY 236 >gi|289596374|ref|YP_003483070.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Aciduliprofundum boonei T469] gi|289534161|gb|ADD08508.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Aciduliprofundum boonei T469] Length = 255 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 16/246 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ +AQ+ D+ N+ +R R D+ +F EL+++GY D +F+++ Sbjct: 1 MKVLLAQMRASF-DVQNNL---KRLLNIVKRNDADMYVFPELYLTGYLIRDKIFERAM-- 54 Query: 65 ACSSAIDTLKSDTHDGGAG--IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 D + D + ++ GFP + E + NS ++ G I R K+ LPN+ Sbjct: 55 ---DGEDEIFGDIVNVAKDKVLIFGFPER-AEHIYNSAAVIVDGEIKIAR-KLYLPNFGP 109 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EK F G + + ++G+ IC D + + K GA+ + +++ASP Sbjct: 110 FEEKLYFKEGEKPFVVDTQFGKIGVQICYDAF-FPEVAKTQALNGADIIVNISASPITSR 168 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 + ++ I+ + + +YVN G Q + F G S + + +L ++ +F E Sbjct: 169 AMFEK--IIPARAIENTVFFVYVNWAGLQRTMEFWGGSMFYSPRGKLLYKAPYFEEDIHT 226 Query: 243 TEWHYD 248 E + D Sbjct: 227 VEINLD 232 >gi|229814933|ref|ZP_04445271.1| hypothetical protein COLINT_01976 [Collinsella intestinalis DSM 13280] gi|229809420|gb|EEP45184.1| hypothetical protein COLINT_01976 [Collinsella intestinalis DSM 13280] Length = 665 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 94/468 (20%), Positives = 175/468 (37%), Gaps = 64/468 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+ +GD G ++ + A G DL+ + G P LV ++ Sbjct: 1 MRIALAQIGARLGDFDGICSRVEQQVYLAQDAGADLLCVPAPLMCGVTPGALVDYPNYEH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+D L + G +V + G L +L G ++ +R + H Sbjct: 61 DLLRALDRLAAICDAAGVACIVPAVLSLEVGQLFEAFLLRRGRVVPLRLTMI------RH 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL--FSLNASPYYHN 182 ++ +S +S P VF I + D ++ G + L F +N Sbjct: 115 QEGVPVSPWS--PPVFDIAGTRIAVTFDAQRDLASLPG----GCDLLLHFPVNGLDVTDC 168 Query: 183 KLKKRHEIVTGQ----ISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + TGQ ++ + + + VGG D+ ++ G S+ D ++ F E Sbjct: 169 DSAAAAALPTGQMTERVARAGIWMACMAPVGGYDDAVYTGGSYVLDDGGRVVALAPCFEE 228 Query: 239 QNFMTEW---------------HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 + + H+D+ WN + L L Sbjct: 229 SLLVQDVVRGVPCEAVEDRKIPHFDRGTWMWNGLR----------------------LHL 266 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA-- 341 RD V +V++ L GG+ S+L A +AVDALG +V + + + S + ++ A Sbjct: 267 RDSVAAQGAGRVLVALDGGLASSLLACLAVDALGSRSVIALHVEHDGASDGTSQELHALR 326 Query: 342 --CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNH 397 A+ + + + + + L+ +EP GI Q+R+ ++ ++ Sbjct: 327 SRLAREVASRLHIRMVERVAPDIRPLLD---SDEPGNPGISVPTAQARVDALMMEDVAQI 383 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 AM L+ K++ ++ P D+Y T + LA RN Sbjct: 384 EHAMPLSALTKTDYALRPRVGARANVATLAPFGDVYLTSLEWLARARN 431 >gi|15383989|gb|AAK96067.1|AF393466_1 NAD synthase [uncultured crenarchaeote 74A4] Length = 197 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 31/215 (14%) Query: 326 LPYKYTSPQS-LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 +P T+P+S EDA G ++ ++ I +VN + S +LQ P+ N+++ Sbjct: 1 MPDTTTTPKSETEDAVKIISLTGIEHKLIDIKPIVNEY----SMYLQ--PNEKAKGNLRA 54 Query: 385 -RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 R+R NIL +N ++L +S+KSE +GY T +GD + P+ LYK QV ++A + Sbjct: 55 ERVRTNILYYYANIENYLVLGSSDKSEHLIGYFTKFGDGASDLTPIVSLYKLQVREIAKY 114 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAEL-RPHQTDQESLPPYPILDDII-----KRIV 497 LG IP +I+ K S L + H+ ++E Y +D I+ K++ Sbjct: 115 ---------LG-----IPENIILKKSSPHLWKDHEAEKELGIQYEEVDSILYCLFEKKLT 160 Query: 498 ENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQA 532 E + I + + +TV + L SE+KR A Sbjct: 161 VQETAEIT---KIDKKTVEKIYELNINSEHKRLLA 192 >gi|61657400|emb|CAI44316.1| hypothetical protein [Thermotoga petrophila] Length = 274 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 4/150 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KL++A Q+ P +GD GN+ + + E A +G ++++F EL ISGY ++ + K+ + Sbjct: 7 KLRVAAVQMLPAIGDFEGNLERIEQFIEMAVSEGAEVVVFPELTISGYTWDEAILKRGAL 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A L + +G I VG PR + NS+VI + DK +L Sbjct: 67 FFSEVAKKKLLKLSREGQILIAVGTPRIVLGKLRNSLVIFKKKKELLFYDKTHLFR---- 122 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDI 153 EK F G +R + G LIC +I Sbjct: 123 GEKNVFEPGEYFLVFSYRGVVFGTLICYEI 152 >gi|284162565|ref|YP_003401188.1| NAD+ synthetase [Archaeoglobus profundus DSM 5631] gi|284012562|gb|ADB58515.1| NAD+ synthetase [Archaeoglobus profundus DSM 5631] Length = 635 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 6/134 (4%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK-YTSPQSLEDAAA 341 +RDYV+ +N V++G+SGG+DSA A + V ALG + V +++P + T + +EDA Sbjct: 13 IRDYVESSNARGVVVGISGGVDSATTAFLCVRALGSDRVLGLIMPERGVTREEDIEDALE 72 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 + LG KY + I+ +V+ F + + E+ + + N++ RIR I +N + Sbjct: 73 VCRILGIKYKYIEINPMVDAFLNNL-----EDGTDMAKANVRPRIRMIINYFYANSLNYL 127 Query: 402 LLTTSNKSEISVGY 415 + T NKSE+ VGY Sbjct: 128 VAGTGNKSELMVGY 141 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 20/122 (16%) Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T YGD F P+ DLYKT+V++LA + LG +P I++K+PSA L Sbjct: 521 TKYGDGGVDFLPIGDLYKTEVWELAKF---------LG-----VPDRIVKKTPSAGLWIG 566 Query: 477 QTDQESLP-PYPILDDIIK---RIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQA 532 QTD+E + Y LD ++K R + EE I + + + VR V ++ S++KR Sbjct: 567 QTDEEEMGITYVKLDTVLKALERGYKPEE--IPEKFDVSKDEVRKVLEMVERSKHKREMP 624 Query: 533 PV 534 P+ Sbjct: 625 PI 626 >gi|320588688|gb|EFX01156.1| glutamine-dependent NAD(+) synthetase [Grosmannia clavigera kw1407] Length = 674 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 127/574 (22%), Positives = 204/574 (35%), Gaps = 124/574 (21%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ + ++ LN D GN + + EA +QG L + EL I GY D + Sbjct: 1 MQLVTLSCCNLNQWALDFEGNTKRIIESIHEAKKQGAKLRVGPELEICGYDCLDHFLEGD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 C + + +D + +G P + N V+ G II +R K+ L + Sbjct: 61 LYLHCWQQMYRILTDKSCYDILLDIGMPVMHRGNRFNCRVLACNGKIILIRPKLFLASDG 120 Query: 122 EFHEKRTFISGYS------------------------NDPIVFR-DIRLGILICEDIWKN 156 + E R FI+ + D ++ D LG CE+++ Sbjct: 121 NYRENRYFIAWHGPRHVEEYYLPPMMQELQGSIKIPIGDALISTPDTCLGAETCEELFTP 180 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHN--KLKKRHEIVTGQISHVHLPIIYVNQVG-GQDE 213 ++ + GAE N+S +HN KL R ++T +Y N G G + Sbjct: 181 NSPHIGMGLSGAEIF--TNSSGSHHNLRKLDIRIALITEATRKNGGIYLYSNSRGAGGER 238 Query: 214 LIFDGASF------------------------CFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 L +DG S D ++ +F+ M Y Q Sbjct: 239 LYYDGCSMIIVNGNIVAQGSQFSLKDVEVITATVDLEEVRSFRFTPSRGMQAMQAPAY-Q 297 Query: 250 QLSQWNYMSDDS---ASTMYIP----LQEEEADYN-ACVLSLRDYVQKNNFHKVIIGLSG 301 ++ +SDD+ A T P L EEE AC L DY++++ ++ LSG Sbjct: 298 RIEASFSLSDDTLGLAPTKTRPAHYHLPEEEIALGPACYLF--DYLRRSGAAGFLLPLSG 355 Query: 302 GIDSALCAAIA------VDALGKENVQTIMLPYKY------TSPQSLEDAAAC------- 342 GIDS A I V A +E +T+M +K T P++ ++ C Sbjct: 356 GIDSCATATIVFSMCRLVMAAVEEGNETVMEVFKRWCRHAETLPKTPQELCNCIMHSIYM 415 Query: 343 -----------------AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 AK +G + + I D + F L SG + + + Sbjct: 416 GMKTQSSKETRQRAETLAKDIGSYHTDINIDDAFHSFKGLF--------SGATGFDPKFK 467 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 + G + LL ++N E GY T Y S NP+ + KT + + W Sbjct: 468 VYG-------GGNTENLLGSANVDECLRGYLTKYDCSSADINPIGSISKTDLKRFIRW-- 518 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 I L+ P+AEL P D Sbjct: 519 ------AWKEFDLAILEEFLDAVPTAELEPITGD 546 >gi|253701774|ref|YP_003022963.1| NAD synthetase [Geobacter sp. M21] gi|251776624|gb|ACT19205.1| NAD+ synthetase [Geobacter sp. M21] Length = 328 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 66/248 (26%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS----------------LED 338 +++ LSGGIDS++ AA+AV A+GKE V + +P +++S +S LE+ Sbjct: 39 LVVALSGGIDSSVTAALAVRAIGKERVIGLEMPERHSSGESQKLSGKLAASLGIETVLEE 98 Query: 339 AAACAKALGC--KYD-----VLP-----------IHDLVNH-FFSLMSQFLQEEPSGIV- 378 +A +A+GC YD V+P I + + H F+ +Q+ GI Sbjct: 99 ISAALEAVGCYRNYDEAVRMVVPGYGEGWKSKIVISNNMEHPGFTSFYLVVQDGAQGITR 158 Query: 379 -------------AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 A N + RIR + ++ + T N+ E G+ GD + Sbjct: 159 VRLPFKPYLQIVAATNFKQRIRKMLEYYHADRLNFAVAGTPNRLEYDQGFFVKLGDGAAD 218 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-- 483 P+ LYK+QV+QLA + LG +P I + P+ + Q+ Sbjct: 219 IKPIAHLYKSQVYQLAEY---------LG-----VPEEIRSRKPTTDTYSLAQGQDEFYF 264 Query: 484 -PPYPILD 490 PYP +D Sbjct: 265 SLPYPEMD 272 >gi|92114479|ref|YP_574407.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chromohalobacter salexigens DSM 3043] gi|91797569|gb|ABE59708.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chromohalobacter salexigens DSM 3043] Length = 280 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 7/153 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++ AQ+N +GD+ N+ + +A R+G++L++F EL ++GY + V Sbjct: 7 LRVGAAQINASLGDVDANLERHLAFIADARRKGLELLVFPELSLTGYGLGNRVIDV---- 62 Query: 65 ACSSAIDTLKSDTHDGG-AGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSE 122 AC + L G +VVGF + G N++ IL G + AV K+NLP Y Sbjct: 63 ACPAHDPRLAELARAAGEMQVVVGFVEEASPGEYYNALAILQHGKLQAVHRKLNLPTYGG 122 Query: 123 FHEKRTFISGYSNDPI-VFRDIRLGILICEDIW 154 E + F G + V LIC D+W Sbjct: 123 LEEGKLFTHGSELTHLPVCPGWSATSLICADLW 155 >gi|195566622|ref|XP_002105712.1| GD15878 [Drosophila simulans] gi|194204271|gb|EDX17847.1| GD15878 [Drosophila simulans] Length = 1059 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 132/610 (21%), Positives = 228/610 (37%), Gaps = 145/610 (23%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN+ + ++ EA G EL + GY ED F++ Sbjct: 1 MGRKVTVAVSTLNQWALDFEGNMVRILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + ++ + S + + VG P + N V I+ +R K+ + Sbjct: 60 PDTFLHSWEVLLEVMMSPMCENML-VDVGMPVMHRNVAYNCRVAFFNRQILLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD LG ICE++ Sbjct: 119 DDGNYRESRWFTAWTKALQTEEYVLPRMIAQHTGQQTVPFGDAVIATRDTCLGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL----PIIYVNQVG 209 W + KH++ A +N+S Y +L+K H I + I + ++ N G Sbjct: 179 WNVRS--KHIEMSLAGVELIVNSSGSYM-ELRKAH-ITSDLIRNASFKAGGAYLFSNLRG 234 Query: 210 GQDELI-FDGAS-FCFDGQ-----QQLAFQ-------------------------MKHFS 237 + + F+G S +G+ QQ A Q M S Sbjct: 235 CDGQRVYFNGCSAIALNGEILARGQQFALQDVEVTLATIDLEEIRAYRVSLRSRCMTAAS 294 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKNNFHK 294 ++ H D ++S + + S + P+ +EE A AC L DY++++ Sbjct: 295 AADY-PRIHCDFEMSTHSDIFKTSTPPLNWPIHTPEEEIALGPACW--LWDYLRRSGQGG 351 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIML--------------PYKYT--------- 331 + LSGG+DS+ AAI V ++ ++ VQ + L YT Sbjct: 352 FFLPLSGGVDSSSSAAI-VHSMCRQIVQAVQLGDAQVLHDIRQLLADSDYTPDNAAGLCN 410 Query: 332 -------------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---- 374 S ++ AA A +G + + I VN S+ + P Sbjct: 411 RLLVTCYMGSVNSSKETRRRAAQLANQVGSYHIEISIDSAVNALLSIFNAVTGLTPRFRT 470 Query: 375 ------SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYG 420 + +N+QSRIR + + + N +L L ++N E GY T Y Sbjct: 471 QGGCARQNLALQNMQSRIRMVLAYIFAQLTLWVRNRPGGLLVLGSANVDESLRGYLTKYD 530 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 S NP+ + K + + +T + SI++ P+AEL P Sbjct: 531 CSSADINPIGGISKMDLRRF--------LTYAKDKFNLPVLESIIDAPPTAELEPLQENG 582 Query: 476 --HQTDQESL 483 QTD+E + Sbjct: 583 ELQQTDEEDM 592 >gi|226946891|ref|YP_002801964.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Azotobacter vinelandii DJ] gi|226721818|gb|ACO80989.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Azotobacter vinelandii DJ] Length = 292 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 18/239 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDL 56 M + + +A Q+ D A NIA A R EA +G +IL ELF + Y P D Sbjct: 1 MSRIVTVAATQM-ACSWDRAANIANAERLVREAAARGAQVILLQELFETPYFCQKPNPDY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + + ++ + AI + + + + F + + NS+ ILDA G ++ + K Sbjct: 60 LQLATTVEE-NPAIRHFRKIAAELQVVLPISFYERAGQARFNSIAILDADGRMLGLYRKS 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ +HEK F G + + R R+G+ IC D W + + + QGAE L Sbjct: 119 HIPDGPGYHEKYYFNPGDTGFKVWQTRHGRIGVAICWDQWFPES-ARSMALQGAELLLYP 177 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFD 224 ++ + P+ + L + H + G + P+I N++G + + + F G+SF D Sbjct: 178 TAIGSEPHDPSILSRDHWQRVQQGHAAANLTPLIASNRIGREVQEDYHIDFYGSSFIAD 236 >gi|325180874|emb|CCA15284.1| unnamed protein product [Albugo laibachii Nc14] Length = 714 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 124/604 (20%), Positives = 213/604 (35%), Gaps = 133/604 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN D GN+ + + +EA +G + EL + GY ED ++ Sbjct: 1 MSTLVTVATCNLNQWALDFDGNLKRIISSIQEAKCKGAKYRVGPELEVCGYGCEDHFLEQ 60 Query: 61 SFIQACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 C +I+ L++D DG +G P N + ++ +R K+ L + Sbjct: 61 DTFYHCWESIEEILQTDITDG-ILCDIGMPVMHNGVRYNCRLFCLDRRVLFIRPKLYLAD 119 Query: 120 YSEFHEKRTFISG------------------------------YSNDPIVFRDIRLGILI 149 + E R F + + + + F D Sbjct: 120 DGNYRENRYFTTWKIRERSQDRNVQQFVLPPSIQNITNQRSVPFGHAALSFTDTVCASET 179 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 CE+++ + L G E + + + S + KL +R +++ + +Y NQ G Sbjct: 180 CEELFTPDSPSIKLTLSGVEIIGNGSGSHHQLRKLHQRIDLIRDATTKSGGIYLYANQKG 239 Query: 210 GQD-ELIFDGASFCFDGQQQLAFQMKHFSEQNF---MTEWHYDQQLSQWNYMSD--DSAS 263 L +DG + +A Q FS ++ D S +S D AS Sbjct: 240 CDGGRLYYDGCALVVVNGSVVA-QGAQFSVKDVEVTTATVDLDDVRSYRGSISSRSDQAS 298 Query: 264 TMYIPLQEEEADYNAC-----------------------------VLSLRDYVQKNNFHK 294 M + + + D+ C L DY++++ Sbjct: 299 AMESAIPKIDVDFELCHATDDIHIVPTLPLEVRYHTIEEEIAYGPACWLWDYLRRSGAAG 358 Query: 295 VIIGLSGGIDSALCAAIAV-------------DALGKENVQTIM---------------- 325 + LSGG DS+ A I DA ++VQ IM Sbjct: 359 FFLPLSGGADSSSVACIVGIMCHLVTKAANDGDACVVQDVQRIMGTSTEAYASIEPEVLA 418 Query: 326 --------LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + K +S + A A +G + + I +V S+ S ++ P I Sbjct: 419 SHVLHTTYMGTKNSSTNTRLRAKLLADEIGSYHLHVAIDSIVQSVISVFSLLTKKTPRYI 478 Query: 378 ----------VAENIQSRIRGNILMAL--------SNHSKAMLLTTSNKSEISVGYGTLY 419 +NIQ+R+R + L S H ++L+++N E GY T Y Sbjct: 479 SEGGNIQEDLALQNIQARLRMVMSYLLAQLLPWVRSKHGFLLVLSSANVDEALRGYMTKY 538 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP--HQ 477 SG NP+ + K + +L +W + + L +V+ E P+AELRP + Sbjct: 539 DCSSGDINPIGAISKCDLKKLLTWAS---VRYNFPSLQKVV-----EAPPTAELRPMANN 590 Query: 478 TDQE 481 T QE Sbjct: 591 TSQE 594 >gi|19075271|ref|NP_587771.1| glutamine-dependent NAD(+) synthetase (predicted) [Schizosaccharomyces pombe 972h-] gi|8928216|sp|O74940|NADE_SCHPO RecName: Full=Putative glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|3169059|emb|CAA19255.1| glutamine-dependent NAD(+) synthetase (predicted) [Schizosaccharomyces pombe] Length = 700 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 121/589 (20%), Positives = 208/589 (35%), Gaps = 124/589 (21%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + IA QLN D GN + + +EA RQ L + EL ++GY ED + Sbjct: 1 MERYVTIASCQLNQWAMDFEGNRLRIIDSIKEAKRQNASLRVGPELEVTGYGCEDHFLES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + ++ D + +G P + N ++ G I+ +R KI L + Sbjct: 61 DTYYHSWEMLCSIIHDPDCQDILLDIGMPVMHKAMRHNCRILALNGKILLIRPKIWLCDD 120 Query: 121 SEFHEKR-----------------TFISGYSNDPIV--------FRDIRLGILICEDIWK 155 F E R TF++ N V + +G+ CE+++ Sbjct: 121 GNFRESRWFTPWLRPRVVETHYLPTFVAKSLNQTTVPIGDAILQCNETVVGVETCEELFT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 ++ + G E + + S + KL R ++ +Y NQ G L Sbjct: 181 PNSPHIDMALDGVEIFINASGSHHELRKLTTRVNLIQNATEKCGGIYLYSNQRGCDGGRL 240 Query: 215 IFDGASFCFDGQQQLA--------------------------FQMKHFSEQNFMTEW--- 245 +DG+S F + LA FQ H + + Sbjct: 241 YYDGSSMIFANGKMLAQGHQFSLKDVEVISATVDVDTVRSYRFQPSHGIQGVTRPSYERI 300 Query: 246 HYDQQLSQWN-----YMSDDSASTMYIPLQEEEADYN-ACVLSLRDYVQKNNFHKVIIGL 299 H + LS + Y + IPL EEE + AC L DY+++++ + L Sbjct: 301 HVNFSLSSYQQDYDIYRKPTDPIEVTIPLPEEEITFGPACW--LWDYLRRSHAAGFFLPL 358 Query: 300 SGGIDSALCAA-------IAVDALGKENVQ----------------------------TI 324 SGG+DS A I A+ +++ Q T Sbjct: 359 SGGLDSCSTAVLVYSMCRIVCKAMEEDDAQVLSDVRRIVGDPSYSSTDPKKLLNHLFYTA 418 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---------- 374 + +++S ++ A + +G + + I + + L + + P Sbjct: 419 FMGSEHSSKETRSRAKELSSLIGSYHTDVNIDTMTSAVVKLFALVTGKTPQFRSNGGTNA 478 Query: 375 SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSGGF 426 + +NIQ+R R +L + +S ++L L +SN E GY T Y S Sbjct: 479 ENLALQNIQARSRMLLGYLFAQLLPWVRGYSGSLLVLGSSNVDECLRGYLTKYDCSSADI 538 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 NP+ + KT + + L I L+ +P+AEL P Sbjct: 539 NPIGGISKTDLKSFLRYAKE--------ALDLPILQEFLDATPTAELEP 579 >gi|195352426|ref|XP_002042713.1| GM17596 [Drosophila sechellia] gi|194126744|gb|EDW48787.1| GM17596 [Drosophila sechellia] Length = 787 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 132/610 (21%), Positives = 228/610 (37%), Gaps = 145/610 (23%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN+ + ++ EA G EL + GY ED F++ Sbjct: 1 MGRKVTVAVSTLNQWALDFEGNMVRILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + ++ + S + + VG P + N V I+ +R K+ + Sbjct: 60 PDTFLHSWEVLLEVMMSPMCENML-VDVGMPVMHRNVAYNCRVAFFNRQILLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD LG ICE++ Sbjct: 119 DDGNYRESRWFTAWTKALQTEEYVLPRMIAQHTGQQTVPFGDAVIATRDTCLGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL----PIIYVNQVG 209 W + KH++ A +N+S Y +L+K H I + I + ++ N G Sbjct: 179 WNVRS--KHIEMSLAGVELIVNSSGSYM-ELRKAH-ITSDLIRNASFKAGGAYLFSNLRG 234 Query: 210 GQDELI-FDGAS-FCFDGQ-----QQLAFQ-------------------------MKHFS 237 + + F+G S +G+ QQ A Q M S Sbjct: 235 CDGQRVYFNGCSAIALNGEILARGQQFALQDVEVTLATIDLEEIRAYRVSLRSRCMTAAS 294 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKNNFHK 294 ++ H D ++S + + S + P+ +EE A AC L DY++++ Sbjct: 295 AADY-PRIHCDFEMSTHSDIFKTSTPPLNWPIHTPEEEIALGPACW--LWDYLRRSGQGG 351 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIML--------------PYKYT--------- 331 + LSGG+DS+ AAI V ++ ++ VQ + L YT Sbjct: 352 FFLPLSGGVDSSSSAAI-VHSMCRQIVQAVQLGDAQVLHDIRQLLADSDYTPDNAAGLCN 410 Query: 332 -------------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---- 374 S ++ AA A +G + + I VN S+ + P Sbjct: 411 RLLVTCYMGSVNSSKETRRRAAQLANQVGSYHIEISIDSAVNALLSIFNAVTGLTPRFRT 470 Query: 375 ------SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYG 420 + +N+QSRIR + + + N +L L ++N E GY T Y Sbjct: 471 QGGCARQNLALQNMQSRIRMVLAYIFAQLTLWVRNRPGGLLVLGSANVDESLRGYLTKYD 530 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 S NP+ + K + + +T + SI++ P+AEL P Sbjct: 531 CSSADINPIGGISKMDLRRF--------LTYAKDKFNLPVLESIIDAPPTAELEPLQENG 582 Query: 476 --HQTDQESL 483 QTD+E + Sbjct: 583 ELQQTDEEDM 592 >gi|238763258|ref|ZP_04624223.1| N-carbamoylputrescine amidase [Yersinia kristensenii ATCC 33638] gi|238698531|gb|EEP91283.1| N-carbamoylputrescine amidase [Yersinia kristensenii ATCC 33638] Length = 294 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 118/280 (42%), Gaps = 26/280 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CSWDLPKNIENAEKLVRDAHAKGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQEL--DSSPLIQHFSKLAAELEVVLPLSFFEKANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALLGAEIIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD-------ELIFDGASFC 222 ++ + P Y + + H + G + +P+I N++G + E+ F G+SF Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKYIDGLEMTFYGSSFI 236 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSD 259 D L Q E + E+ + Q + W D Sbjct: 237 ADQTGALVAQANKTDEAILVHEFDLQEIAAQRASWGLFRD 276 >gi|56963916|ref|YP_175647.1| NAD synthetase [Bacillus clausii KSM-K16] gi|56910159|dbj|BAD64686.1| glutamine-hydrolyzing NAD(+) synthase [Bacillus clausii KSM-K16] Length = 276 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 29/225 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQT-----IMLPYKYTSPQ 334 L++Y +K ++G+SGG DS L A + AVD L +E T + LPY + Sbjct: 32 LKNYTRKAGTKGFVLGISGGQDSTLAAKLAQMAVDELNQEAPGTYEFHAVRLPYGVQHDE 91 Query: 335 SLEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +DA +G K + I V+ + ++ EE SG + N ++R R + Sbjct: 92 --KDAQVALSFIGPDKIHTVNIKPAVDAAVASFAEATGEELSGFIKGNTKARERMKVQFD 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 L+ H + ++L T + +E G+ T +GD + PL L K R + L Sbjct: 150 LAAHYQCLVLGTDHAAEAVTGFFTKFGDGACDVIPLYGLTK---------RQGKALLQEL 200 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G P ++ +K P+A+L +P D+E+L Y +DD ++ Sbjct: 201 G-----APEALYQKIPTADLEDDKPGLPDEEALGMTYEQIDDYLE 240 >gi|325961983|ref|YP_004239889.1| NH(3)-dependent NAD(+) synthetase [Arthrobacter phenanthrenivorans Sphe3] gi|323468070|gb|ADX71755.1| NH(3)-dependent NAD(+) synthetase [Arthrobacter phenanthrenivorans Sphe3] Length = 284 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 28/227 (12%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPYKYTS 332 V L+DY++ + ++G+SGG+DS+L A +AV+ L E V+ + LPY Sbjct: 28 VTFLKDYLKATHTKGFVLGISGGLDSSLAGKLAQLAVEELEAEGVEANFVAVRLPYGVQH 87 Query: 333 PQSLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 + EDA A + K + I V+ F + + E S N ++R R Sbjct: 88 DE--EDAQAALDFIKPKTEWTFNISAAVDGFEDEFEKTVGSEISDFHKGNTKARTRMIAQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 AL+ +++ T + +E G+ T YGD PL L K R + + + Sbjct: 146 YALAGEHNYLVIGTDHGAESVTGFFTKYGDGGADILPLFGLNK---------RQNRALLA 196 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + EK P+A+L +P +TD++ L Y +DD ++ Sbjct: 197 ELG-----APARVWEKVPTADLLDDKPGRTDEDELGLSYDQIDDYLE 238 >gi|322831646|ref|YP_004211673.1| N-carbamoylputrescine amidase [Rahnella sp. Y9602] gi|321166847|gb|ADW72546.1| N-carbamoylputrescine amidase [Rahnella sp. Y9602] Length = 294 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 26/280 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 ++ + ++ Q++ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MRNVTVSATQMS-CSWDLENNIVNAEKLVRQAHAKGAQVILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S+ I + + + + F + NS+V++DA G+++ V K Sbjct: 60 SLAQELDN--SALIRHFSALAKELEVVLPLSFFEKCNNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L QGAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWNTRYAKIGVGICWDQW-FPETARCLALQGAEIIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD-------ELIFDGASFC 222 ++ + P Y + H + G + +P+I N++G + E+ F G+SF Sbjct: 177 TAIGSEPAYPEIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKFIPDYEMTFYGSSFI 236 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSD 259 D L Q E + + D Q + W D Sbjct: 237 ADQTGALVEQANKTEEAVLVHTFDLDAIAAQRASWGLFRD 276 >gi|224053749|ref|XP_002297960.1| predicted protein [Populus trichocarpa] gi|222845218|gb|EEE82765.1| predicted protein [Populus trichocarpa] Length = 730 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 129/595 (21%), Positives = 204/595 (34%), Gaps = 123/595 (20%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ LK+A LN D N+ + + +A + G + L EL I+GY ED + Sbjct: 1 MRLLKVATCNLNQWAMDFDCNLKNIKESITQAKQAGAVIRLGPELEITGYGCEDHFLELD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I + + G +G P N V+ II +R K+ L N Sbjct: 61 TINHGWECLKEILVGDWTDGILCSIGMPVIKGSERYNCQVLCFNRKIIMIRPKMWLANDG 120 Query: 122 EFHEKRTFISGYSNDPIV-------------------------FRDIRLGILICEDIWKN 156 + E R F + D +V F D + +CE+++ Sbjct: 121 NYRELRWFTAWKHKDQLVDFQLPSEIAEAISQKSVHFGYGYVQFLDTAVAAEVCEELFTP 180 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 L G E + + S + KL R G +Y N G L Sbjct: 181 IPPHAELALNGVEVFMNASGSHHQLRKLDVRLRAFIGATHTCGGVYMYSNHQGCDGGRLY 240 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQN---FMTEWHYDQQLSQWNYMSD--------DSAST 264 +DG S C ++ Q FS ++ + + D S +S ++ S+ Sbjct: 241 YDGCS-CVVVNGEVVAQGSQFSLRDSEVVLAQVDLDAVASLRGSISSFQEQASYKNTVSS 299 Query: 265 MYIPLQ----------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + +P + EEE + L DY++++ ++ LSGG Sbjct: 300 VLVPYKLCQPFSMQMSLSSPLKINYHSPEEEIAFGPGCW-LWDYLRRSGASGFLLPLSGG 358 Query: 303 IDSALCAAIA-------------------VDAL-------------GKENVQTIMLPYKY 330 DS+ AAI DA+ KE + I Sbjct: 359 ADSSSVAAIVGCMCQLVVKEIDNGDEQVKADAIRIGNYTDGQFPTDSKEFAKRIFYTVFM 418 Query: 331 TSPQSLEDAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SG 376 S S ED AK L G + + I +V+ SL + P Sbjct: 419 GSENSSEDTKKRAKELADEIGSWHLDVSIDGVVSALLSLFQTLTGKRPRYKVDGGSNIEN 478 Query: 377 IVAENIQSRIRGNILMALSN-----HSKA---MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +NIQ+RIR + L++ HSK ++L +SN E GY T Y S NP Sbjct: 479 LGLQNIQARIRMVLAFMLASLLPWVHSKPGFYLVLGSSNVDEGLRGYLTKYDCSSADINP 538 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + + K + W H S L + E P P+AEL P +++ L Sbjct: 539 IGSISKQDLRAFLRWAAIHLGYSSLAEI-EAAP-------PTAELEPIRSNYSQL 585 >gi|238787368|ref|ZP_04631167.1| N-carbamoylputrescine amidase [Yersinia frederiksenii ATCC 33641] gi|238724630|gb|EEQ16271.1| N-carbamoylputrescine amidase [Yersinia frederiksenii ATCC 33641] Length = 294 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQELDN--SPLIQHFSKLAAELEVVLPLSFFEKANNAYYNSLVMIDADGSVMDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALLGAEVIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKFIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|307720302|ref|YP_003891442.1| N-carbamoylputrescine amidase [Sulfurimonas autotrophica DSM 16294] gi|306978395|gb|ADN08430.1| N-carbamoylputrescine amidase [Sulfurimonas autotrophica DSM 16294] Length = 285 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 17/287 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---V 57 M K+K++ Q+ + D N+ KA + ++A +G ++IL ELF + Y +D+ Sbjct: 1 MHAKVKVSAIQMR-MSEDKNSNVKKAEQLVKKAAAEGANIILLPELFQTLYFCKDIDEKY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + + I + + I+V + + ++G NS+V++DA G+++ K + Sbjct: 60 FEWAQPLKNNELIQHFAALAKEYHVVILVSYFEKAEKGYFNSLVVVDADGSVMDNYRKTH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + ++G+ IC D W + L GAE +F Sbjct: 120 IPDGPGYEEKFYFAPGDTGFKVYETAYAKIGVGICWDQW-FCETARALTLMGAEIIFYPT 178 Query: 173 SLNASPYYHNKLKKRHEIV-TGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFDGQQ 227 ++ + P H K+ + V G + +P++ N+ G + EL F G+SF D Sbjct: 179 AIGSEPEIHLDSKEHWQRVQMGHAATNTVPVVAANRTGKERGESCELTFYGSSFITDYTG 238 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNY--MSDDSASTMYIPLQEE 272 ++ + E E+ D+ Q Y + D S MY + +E Sbjct: 239 KIIAEAPRDKEAVIYAEFDLDENAKQREYWGLLKDRRSDMYAKICQE 285 >gi|327404257|ref|YP_004345095.1| NAD+ synthetase [Fluviicola taffensis DSM 16823] gi|327319765|gb|AEA44257.1| NAD+ synthetase [Fluviicola taffensis DSM 16823] Length = 259 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+ Y + ++G+SGG+DSA+ +A+ K V + +P + T + A Sbjct: 15 LKQYAVTAGVNGFVVGISGGVDSAVTSALCAKTGMK--VLVLNMPIRQTKAE-FTRATEH 71 Query: 343 AKALGCKYDVLPIH--DLVNHFFSLMSQF-LQEEPSGIVAENIQSRIRGNILMALSNHSK 399 L + + DL + FF L F +Q + + N ++R+R L AL Sbjct: 72 IDWLQTHFSNVEAQTIDLTDAFFQLEKIFPVQTVENHLAMANSRARLRMTTLYALGQTHG 131 Query: 400 AMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 ++ T NK E VG+ T YGD +P+ DL KT+VF+LA N Sbjct: 132 LLVAGTGNKIEDFGVGFFTKYGDGGVDLSPIADLTKTEVFELAGSLN------------- 178 Query: 459 VIPPSILEKSPSAEL-RPHQTDQESL-PPYPILD 490 I PSIL P+ L ++D++ + YP L+ Sbjct: 179 -IVPSILTAKPTDGLWEDGRSDEDQIGATYPELE 211 >gi|61657479|emb|CAI44391.1| hypothetical protein [Thermotoga sp. KOL6] Length = 274 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 4/150 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KL+IA Q+ P +G+ N+ + EEA G+ LI+F EL ISGY ++ V KK + Sbjct: 7 KLRIAAVQMLPRIGEYQWNLERIGHFVEEAIDNGVSLIVFPELTISGYTWDEGVMKKGSV 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A L + +G IVVG PR + NS+VI + DK +L Sbjct: 67 FFKEVAKKKLLKLSREGQIVIVVGTPRTVLGKLRNSLVIFKKKKELLFYDKTHLFR---- 122 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDI 153 EK F G ++++ G LIC +I Sbjct: 123 GEKDIFEPGEYYLAFSYKNVVFGTLICYEI 152 >gi|281208973|gb|EFA83148.1| glutamine-dependent NAD+ synthetase [Polysphondylium pallidum PN500] Length = 709 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 130/594 (21%), Positives = 210/594 (35%), Gaps = 135/594 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+K + +A LN D GN+ + + + A G L EL ISGY ED +++ Sbjct: 1 MVKAVTLATCNLNQWALDFKGNLERIIESIKIAKNNGAKYRLGPELEISGYGCEDHFYEQ 60 Query: 61 -SFIQACSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 + I + S L SD T+D + VG P + N VIL I+ + K L Sbjct: 61 DTHIHSWMSVATLLDSDLTND--IIVDVGMPVLHKGVRYNCRVILYNKQIVLITPKKALA 118 Query: 119 NYSEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDI 153 + E R F I+G + P I D + CE++ Sbjct: 119 MDGNYRENRWFTPWLKPRTLETYYLPKSISDITGQESCPIGDAIISTLDTAIASETCEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-D 212 + ++ + G E + + + S + KL R +++ S +Y NQ G Sbjct: 179 FLPNSPHIEMGLDGVEIITNGSGSHHQLRKLCTRVDLIKSATSKSGGIYLYANQQGCDGG 238 Query: 213 ELIFDGASF------CFDGQQQLAFQ---------------------MKHFSEQNFMTEW 245 L +DG C Q + M S+ E+ Sbjct: 239 RLYYDGCCMVMINGDCVAQGSQFSLNDVEVIIATLDLDDVRSFRASFMSRCSQATLTEEF 298 Query: 246 HYDQQLSQWNYMSDDSASTM-------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + L + + ++ + YI EE AC L DY++++ + + Sbjct: 299 PRVRCLIRMSNAPNECPPRLDRVTPIHYISPVEEIGYGPACW--LWDYLRRSGLNGYYLP 356 Query: 299 LSGGIDSA--------LCAAIAVDALGK-----ENVQTIM-------------------- 325 LSGG DSA +C + +D K +VQ I Sbjct: 357 LSGGADSAATAAIVAIMCQLVVMDVSKKSEQVIRDVQRITNDKNYIPTDAKELASRIFFT 416 Query: 326 --LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS-------- 375 L K +S ++ + AA A +G + V+ I + + F S + P Sbjct: 417 AYLATKNSSKETRDRAALIASQVGAIHKVVEIDQITDSFGQAFSTITNKIPKFKVQGGSN 476 Query: 376 --GIVAENIQSRIRGNILMALSNHSKAML------------LTTSNKSEISVGYGTLYGD 421 + +N+Q+R R M +S H +L L ++N E GY T Y Sbjct: 477 RENLALQNVQARAR----MVMSYHLATLLLWEAGREGSLLVLGSANVDESLRGYMTKYDC 532 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 S NP+ + K + + W H L L +V L +P+AEL P Sbjct: 533 SSADINPIGGISKVDLKRFLKWAAEH---KNLPALLDV-----LTATPTAELEP 578 >gi|148545661|ref|YP_001265763.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida F1] gi|148509719|gb|ABQ76579.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida F1] Length = 264 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 27/268 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P D+ GN+ + R + A +G L++ E+F++GY ++ Sbjct: 1 MRIALYQGAPKPLDVPGNLQRLRHQAQLAAERGAQLLVCPEMFLTGYNIGLAQVERLAEA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A A T+ IV G+P R D + NSV ++DA +L NY + Sbjct: 61 ADGPAAMTVVEIAQAHRIAIVYGYPERGDDGAIYNSVQLIDA-------HGRSLSNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F G + P+V ++G+LIC DI N + L GAE + + N Sbjct: 114 HLFGELDRSMFSPGADHFPVVELEGWKVGLLICYDIEFPEN-ARRLALDGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 +PY + ++ R Q ++Y N G +DE+ + G S L M Sbjct: 173 MTPYDFTCQVTVRARAQENQCY-----LVYANYCGAEDEIQYCGQSSIIGPDGSL-LAMA 226 Query: 235 HFSEQNFMTEWHYD---QQLSQWNYMSD 259 E + E ++ Q + + Y++D Sbjct: 227 GRDECQLLAELEHERVVQGRTAFPYLTD 254 >gi|145529880|ref|XP_001450723.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418345|emb|CAK83326.1| unnamed protein product [Paramecium tetraurelia] Length = 685 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 133/592 (22%), Positives = 206/592 (34%), Gaps = 137/592 (23%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++ + LN D N+ + E R+ L EL I GY ED + + Sbjct: 5 RLGVCTLNQWAMDFTQNVQNIIESIEICKRKQCLYRLGPELEICGYMCEDHFLESDTVTH 64 Query: 66 CSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 C A+ + T A IV +G P + N VIL I VR K+ L + + Sbjct: 65 CWEALAEILPHT----ANIVCDIGMPVIHKSVFYNCRVILLNKKIHLVRPKMYLADDGNY 120 Query: 124 HEKRTF------ISGYSNDPIV-----------------FRDIRLGILICEDIWKNSNIC 160 E R F I PI+ D +GI ICE++W Sbjct: 121 RESRYFTPWSKEIEDLELPPIIQIATGQKCVPIGVAILQTHDTEIGIEICEEMWTPIPTS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGA 219 + GAE + + + S Y K+K+R E+ + N G + L FDG Sbjct: 181 ANQALDGAEIILNSSGSHYEVGKIKERTELFKDITKRNGACYAFCNLRGCDGNRLYFDGC 240 Query: 220 S-FCFDGQ---QQLAFQMKHF--------------------------SEQNFMTEWHYDQ 249 S +G+ + AF +K S+Q D Sbjct: 241 SCIVLNGKVFAKSDAFSLKDVEVTTCDIDLQEVRNIRINIKSRSLMASKQKHFPRVKLDI 300 Query: 250 QLSQ---WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 L+Q + Y D IP+Q E ++ L DY++++ ++ LSGG+DS+ Sbjct: 301 NLTQQQNYIYYHD-------IPIQYESEIEDSTACYLWDYMRRSGACGFMLPLSGGLDSS 353 Query: 307 LCAAIAV---------------------------------DALGKENVQTIMLPYKYT-- 331 A D ++ Q I+ +T Sbjct: 354 ATALTVFFMANKIFKTINNVDNDYQTHIKVLQQLRKIVEDDTFTPKSPQEIVNKLFFTVY 413 Query: 332 --SPQSLEDAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 S S +D+ A +K L G ++ + I + S + L++EP Sbjct: 414 LGSENSTQDSRARSKLLAEQIGSRHYEIEIDQVCKACTSCIKPILKKEPQFVSNGGSLSE 473 Query: 376 GIVAENIQSRIRGNI------LMALSNHSKAML--LTTSNKSEISVGYGTLYGDMSGGFN 427 + +NIQ+R R + L +N K L L +SN E G+ T Y S N Sbjct: 474 DLALQNIQARSRMILTYLLAQLTPWNNGKKGFLIVLGSSNLDESIRGFFTKYDCSSADIN 533 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 P+ L K + +L + S + ILE PS ELRP + Sbjct: 534 PIGSLSKNDLRELLLFCYKTFNFSAI--------QLILEAKPSPELRPQTAE 577 >gi|194767049|ref|XP_001965631.1| GF22350 [Drosophila ananassae] gi|190619622|gb|EDV35146.1| GF22350 [Drosophila ananassae] Length = 785 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 134/600 (22%), Positives = 224/600 (37%), Gaps = 136/600 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN+A+ ++ EA G EL + GY ED F++ Sbjct: 1 MGRKVTVAVSTLNQWALDFEGNMARILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + ++ + S + + VG P + N V ++ +R K+ + Sbjct: 60 PDTFLHSWEVLLEVMMSPICENML-VDVGMPVMHRNVAYNCRVAFFNRQLLLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD LG ICE++ Sbjct: 119 DDGNYRESRWFTAWTKALQTEEFVLPRMIAQHTGQQTVPFGDAVIATRDTCLGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL----PIIYVNQVG 209 W + KH++ A +N+S Y +L+K H I T I + ++ N G Sbjct: 179 WNVRS--KHIEMSLAGVELIVNSSGSYM-ELRKAH-ITTDLIRNASFKAGGAYLFSNLRG 234 Query: 210 --GQDELIFDGASFCFDGQ-----QQLAFQMKHFSEQNFMTE------------------ 244 GQ ++ +G+ QQ A Q + E Sbjct: 235 CDGQRVYFHGCSAIALNGELLARGQQFALQDVEVTLATIDLEEIRAYRVSLRSRCSAAAG 294 Query: 245 ------WHYDQQLSQWNYMSDDSASTMYIP---LQEEEADYNACVLSLRDYVQKNNFHKV 295 H D ++S + + S + P +EE A AC L DY++++ Sbjct: 295 AANYPRVHCDFEMSSHSDIFKTSTPPLNWPNHTPEEEIALGPACW--LWDYLRRSGQGGF 352 Query: 296 IIGLSGGIDSALCAAI----------AV---DALGKENVQTIMLPYKYT----------- 331 + LSGG+DS+ A I AV DA +++ I+ YT Sbjct: 353 FLPLSGGVDSSSSATIVHSMCRLIVQAVQLGDAQVLHDIRKILADTDYTPDNAAGLCNRL 412 Query: 332 -----------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP------ 374 S ++ AA A LG + + I VN + + P Sbjct: 413 LVTCFMGSVNSSKETRRRAAQLANQLGSYHIEISIDLAVNALLGIFNAVTGLTPRFRTQG 472 Query: 375 ----SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDM 422 + +NIQSRIR +++ + N +L L ++N E GY T Y Sbjct: 473 GCARQNLALQNIQSRIRMVLAYIFAQLMLWVRNRPGGLLVLGSANVDESLRGYLTKYDCS 532 Query: 423 SGGFNPLKDLYKTQVFQ-LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 S NP+ + KT + + LA + + P+ E I+E P+AEL P Q + E Sbjct: 533 SADINPIGGISKTDLRRFLAYAKEKFNL-----PVLE----QIIEAPPTAELEPLQENGE 583 >gi|332162808|ref|YP_004299385.1| putative carbon-nitrogen hydrolase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604351|emb|CBY25849.1| N-carbamoylputrescine amidase (3.5.1.53) [Yersinia enterocolitica subsp. palearctica Y11] gi|325667038|gb|ADZ43682.1| putative carbon-nitrogen hydrolase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330858998|emb|CBX69356.1| N-carbamoylputrescine amidase [Yersinia enterocolitica W22703] Length = 294 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQELDN--SPLIQHFSKLAAELEVVLPLSFFEKANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALLGAEIIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKYIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|123443624|ref|YP_001007596.1| putative carbon-nitrogen hydrolase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090585|emb|CAL13454.1| putative carbon-nitrogen hydrolase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 294 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQELDN--SPLIQHFSKLAAELEVVLPLSFFEKANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLTLLGAEIIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPDIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKYIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|193805884|dbj|BAG54788.1| delta-aminovaleramidase [Pseudomonas putida] gi|298682244|gb|ADI95308.1| delta-aminovaleramidase [Pseudomonas putida] Length = 264 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 27/268 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P D+ GN+ + R + A +G L++ E+F++GY ++ Sbjct: 1 MRIALYQGAPKPLDVPGNLQRLRHQAQLAAERGAQLLVCPEMFLTGYNIGLAQVERLAEA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A A T+ IV G+P R D + NSV ++DA +L NY + Sbjct: 61 ADGPAAMTVVEIAQAHRIAIVYGYPERGDDGAIYNSVQLIDA-------HGRSLSNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F G + P+V ++G+LIC DI N + L GAE + + N Sbjct: 114 HLFGELDRSMFSPGADHFPVVELEGWKVGLLICYDIEFPEN-ARRLALDGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 +PY + ++ R Q ++Y N G +DE+ + G S L M Sbjct: 173 MTPYDFTCQVTVRARAQENQCY-----LVYANYCGAEDEIEYCGQSSIIGPDGSL-LAMA 226 Query: 235 HFSEQNFMTEWHYD---QQLSQWNYMSD 259 E + E ++ Q + + Y++D Sbjct: 227 GRDECQLLAELEHERVVQGRTAFPYLTD 254 >gi|148657750|ref|YP_001277955.1| NAD synthetase [Roseiflexus sp. RS-1] gi|148569860|gb|ABQ92005.1| NH(3)-dependent NAD(+) synthetase [Roseiflexus sp. RS-1] Length = 345 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 54/208 (25%) Query: 290 NNFHK--VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS------------ 335 FH+ V +G+SGGIDS++ A+ V A G + V +M+P + + P++ Sbjct: 29 RTFHRQGVALGISGGIDSSVALALCVRAFGPQRVVALMMPERDSDPETLHLSEMVARHYG 88 Query: 336 ----LEDAAACAKALGC-------------KYD---------VLPIH----DLVNHFF-- 363 LED + GC +Y+ VLP + D +N F Sbjct: 89 VEPILEDITPVLEGFGCYRRRDEAVRRIFPEYNAERGYKMRIVLPQNLLDADTLNVFSLE 148 Query: 364 ------SLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + S+ L +E + A N + R R +L + ++ T NK+E G+ Sbjct: 149 IVTPDGEVKSKRLPPREYAQIVAASNFKQRTRMAMLYYHAEVRNYAVVGTPNKNEHDQGF 208 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASW 443 YGD P+ LYKTQV+QLA + Sbjct: 209 FVKYGDGGADLRPIVHLYKTQVYQLARY 236 >gi|331212373|ref|XP_003307456.1| hypothetical protein PGTG_00406 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309297859|gb|EFP74450.1| hypothetical protein PGTG_00406 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 709 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 128/596 (21%), Positives = 215/596 (36%), Gaps = 128/596 (21%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + IA LN D GN + ++ + A + + EL ISGY D + Sbjct: 1 MAHPITIATCSLNQWALDFDGNHQRILQSIKLAKEASASIRVGPELEISGYGCFDHFLEA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L + VG P + + N V+ II VR K+ + N Sbjct: 61 DTVTHSWEVLAKLLASPETLDILCDVGMPVIHRGVLYNCRVLFYNSKIILVRPKMWMAND 120 Query: 121 SEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWK 155 + E R F I+ ++ PI V D +GI CE+++ Sbjct: 121 GNYRELRYFSSWRQDRKIEQLLLPRELRLITAQTSVPIGLAIIVTDDTSIGIETCEELFT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 ++ L +G E + +AS + KL R E++ +Y NQ G D + Sbjct: 181 PNSPHIQLSLEGVEIFLNSSASHHELRKLHTRIELIEEATEKAGGVYVYANQQGCDGDRI 240 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNF----------------MTEWHYDQQLS------ 252 +DG S +L Q FS ++ + +QQ + Sbjct: 241 YYDGCSL-ISLNGKLISQGSQFSLKDVEVIVTTVDLETVRTHRVGRNSRNQQAALNIAPL 299 Query: 253 ---QWNYMSDD------------SASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 + Y++ D +Y +EE A AC L DY++++ + Sbjct: 300 GPYERVYLTADLTRHPPPIAVGQPIPAIYHTPEEEIALGPACW--LWDYLRRSGMKGYFV 357 Query: 298 GLSGGIDS--------ALCAAIAVDA-LGKENV--------------------------- 321 LSGGIDS ++C +A +A LG + V Sbjct: 358 PLSGGIDSCATATIVYSMCTLVAKEARLGNQQVIDDAVRITSERPDYVPLDPQEFCNKIF 417 Query: 322 QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP------- 374 T + + +SP++ + A A A+G + L + +V +L + + P Sbjct: 418 HTCYMGTENSSPETRKRAKDLASAIGSYHTDLNMDAVVTAIRTLFAVTTGKTPLFKIHGG 477 Query: 375 ---SGIVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGDMS 423 + +NIQ+R+R + LS + ++L ++N E GY T Y S Sbjct: 478 TQTENLALQNIQARLRMLLSYMFAQLSPWVRGTNGGLLVLGSANVDESLRGYMTKYDCSS 537 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + ++ T P+ E L P+AEL P TD Sbjct: 538 ADINPIGGISKTDLKRFIAYAQ----TKFDLPILE----QFLTAVPTAELEPITTD 585 >gi|94039604|dbj|BAE93571.1| NAD synthase NadE [Sumac witches'-broom phytoplasma] Length = 131 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +A VG+ N A + N+ +LF EL +S Y DL F+ +F++ Sbjct: 7 IKIELASPPLTVGNPLKN---AYSMQNVLNKSKASFVLFPELCLSSYTAGDLFFETTFLE 63 Query: 65 ACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A+D LK+++ +G ++G P E + N VI+ I+ + K +PNY EF Sbjct: 64 QNFQALDWLLKNNSFEGV--YILGMPLALHEVLFNVAVIIQKDKILGIIPKKTIPNYKEF 121 Query: 124 HEKRTFISG 132 EKR F SG Sbjct: 122 SEKRWFQSG 130 >gi|307354810|ref|YP_003895861.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanoplanus petrolearius DSM 11571] gi|307158043|gb|ADN37423.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanoplanus petrolearius DSM 11571] Length = 267 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 9/176 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++ +AQ + ++ KA E A+R G +I F E F +G+ P SF + Sbjct: 6 LRLCLAQAESAWKNPELSLKKASVFAECASRDGAAIICFPEQFATGWDPA----SSSFAE 61 Query: 65 ACSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSE 122 + + SD + G G++ F +D +G N+VV D G +++ KI+L +S Sbjct: 62 DEGGPVSGMYSDIAAESGIGVLGSFREKDGDGFRNTVVFFDEHGKVLSKYSKIHL--FSP 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 E + F G S ++ IR GI IC D+ + + +K GAE + A P Sbjct: 120 AGEDKCFSPGSSPSVFEYKGIRFGIAICYDL-RFPELFLRYRKLGAECILVPAAWP 174 >gi|26987124|ref|NP_742549.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida KT2440] gi|24981754|gb|AAN66013.1|AE016230_4 carbon-nitrogen hydrolase family protein [Pseudomonas putida KT2440] Length = 264 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 23/226 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P D+ GN+ + R + A +G L++ E+F+SGY ++ Sbjct: 1 MRIALYQGAPKPLDVPGNLQRLRHQAQLAADRGAQLLVCPEMFLSGYNIGLAQVERLAEA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A A T+ IV G+P R D + NSV ++DA +L NY + Sbjct: 61 ADGPAAMTVVEIAQAHRIAIVYGYPERGDDGAIYNSVQLIDA-------HGRSLSNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F G + P+V ++G+LIC DI N + L GAE + + N Sbjct: 114 HLFGELDRSMFSPGADHFPVVELEGWKVGLLICYDIEFPEN-ARRLALDGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +PY + ++ R Q ++Y N G +DE+ + G S Sbjct: 173 MTPYDFTCQVTVRARAQENQCY-----LVYANYCGAEDEIEYCGQS 213 >gi|78778038|ref|YP_394353.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78498578|gb|ABB45118.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 286 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 19/235 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VFKKS 61 +K++ Q++ + D A N+ KA EA + G +IL ELF Y +D+ F + Sbjct: 2 VKVSAVQMS-MSEDKASNLDKAENLAREAAKNGAQIILLPELFEGYYFCKDMDEKYFSWA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 + + I+ S + I++ + + QEG NS+V+ D G I+ K ++P+ Sbjct: 61 APREGNPLINRFASLAKELKVVILISYFEKSQEGYFNSLVVADTDGTIMDNYRKTHIPDG 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLF---SL 174 + EK F SG N D ++G+ IC D W + L GAE +F ++ Sbjct: 121 PGYEEKFYFKSG--NTGFKVYDTAYAKIGVGICWDQW-FCETARALTLMGAEIIFYPTAI 177 Query: 175 NASPYYHNKLKKRHEIV-TGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFD 224 + P H K+ + V G + +P++ N++G + L F G+SF D Sbjct: 178 GSEPEIHLDSKEHWQRVQMGHAATNTVPVVVANRIGEERGATCTLNFYGSSFITD 232 >gi|319778153|ref|YP_004134583.1| nad+ synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171872|gb|ADV15409.1| NAD+ synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 335 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 69/265 (26%) Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 A+ + V LR+ ++ +++GLSGGIDS++ A+A A+G +NV + +P + P Sbjct: 23 AETDRIVAGLREQLRGMRKRGLVLGLSGGIDSSVSVALAARAVGAKNVFCLFMPESDSDP 82 Query: 334 QSL----------------EDAAACAKALGC--KYDVLPIHDLVNHFF-----------S 364 SL ED A+GC + D I +LV + S Sbjct: 83 DSLRLGRLAAETFGVEAIVEDIGPTLHAMGCYQRRDTF-IRELVPEYGPGWASKIVIANS 141 Query: 365 L------MSQFLQEEPSG---------------IVAENIQSRIRGNILMALSNHSKAMLL 403 L +S + ++P G + A N++ R R I ++ +L Sbjct: 142 LAGEGYNISSLVVQDPEGRQTKLRMSAAVYLGIVAATNMKQRTRKQIEYYHADRLNFAVL 201 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T N+ E G+ GD + P+ LYK+QV+ LA+ LG IP Sbjct: 202 GTPNRLEYDQGFFVKNGDGAADVKPIAHLYKSQVYALAAH---------LG-----IPEE 247 Query: 464 ILEKSPSAELRPHQTDQE----SLP 484 I ++P+ + + QE SLP Sbjct: 248 ICRRAPTTDTYSLEQTQEEFYFSLP 272 >gi|227820147|ref|YP_002824118.1| NAD synthetase [Sinorhizobium fredii NGR234] gi|227339146|gb|ACP23365.1| NH3-dependent NAD(+) synthetase [Sinorhizobium fredii NGR234] Length = 335 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 69/265 (26%) Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 A+ + V LR ++ +++GLSGGIDS++ A+AV A+G +NV + +P + P Sbjct: 23 AETDRIVAGLRAQLRGMRKRGLVLGLSGGIDSSVSVALAVRAVGAKNVFCLFMPENDSDP 82 Query: 334 QSL----------------EDAAACAKALGC--KYDVLPIHDLVNHFFSL---------- 365 +SL ED A+GC + D I +LV + Sbjct: 83 ESLRLGRLVAETYGVEAIVEDIGPTLAAMGCYARRDAF-IRELVPDYGPGWASKIVIANA 141 Query: 366 -------MSQFLQEEPSG---------------IVAENIQSRIRGNILMALSNHSKAMLL 403 +S + ++P G + A N++ R R + ++ +L Sbjct: 142 LEGDGYNISSLVVQDPQGKQTKLRMPPSVYLGIVAATNMKQRTRKQLEYYHADRLNFAVL 201 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T N+ E G+ GD + P+ LYK+QV+ LA++ LG +P Sbjct: 202 GTPNRLEYDQGFFVKNGDGAADVKPIAHLYKSQVYALAAY---------LG-----VPEE 247 Query: 464 ILEKSPSAELRPHQTDQE----SLP 484 I + P+ + + QE SLP Sbjct: 248 IRRRPPTTDTYSLEQTQEEFYFSLP 272 >gi|295704779|ref|YP_003597854.1| carbon-nitrogen hydrolase [Bacillus megaterium DSM 319] gi|294802438|gb|ADF39504.1| carbon-nitrogen hydrolase [Bacillus megaterium DSM 319] Length = 256 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 26/263 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + I IAQ PV+G+ NI K ++A + DL++F EL ++GY D + K + Sbjct: 1 MNITIAQFCPVLGNKKENIRKINDCIKQAVSEQADLVVFPELCLTGYFIWDDI--KELAE 58 Query: 65 ACS-SAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYS 121 + S ++ + D V+ FP G + S +I D G +I K +L + Sbjct: 59 SVSGESLQLFQQSCRDHSIHAVISFPEVTANGHYHITSALIDDTGTVIGTYQKTHLFD-- 116 Query: 122 EFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLF--SLNAS 177 E F G N VF+ +G++IC D+ + + + LK +GA+ L N S Sbjct: 117 --REAEIFRPG--NTLPVFKTKFGNIGLMICYDL-EFPEVARTLKIKGADLLIIPLANMS 171 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM---K 234 PY ++ + + LPI N++G +++ F G S + + ++ +M + Sbjct: 172 PYEDYQIT----YLKSRAMENELPIALCNRIGSEEDTFFFGHSAVVNSKGKVLLKMGSEE 227 Query: 235 HFSEQNFMTEWHYDQQLSQWNYM 257 S E DQ+L NY+ Sbjct: 228 QISTVAISLEESKDQKL---NYL 247 >gi|94039493|dbj|BAE93523.1| NAD synthase [Onion yellows phytoplasma] gi|94039565|dbj|BAE93555.1| NAD synthase NadE [Tomato yellows phytoplasma] gi|94039584|dbj|BAE93563.1| NAD synthase NadE [Iceland poppy yellows phytoplasma] gi|94039590|dbj|BAE93567.1| NAD synthase NadE [Marguerite yellows phytoplasma] Length = 131 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI ++ VG+ N A + N+ +LF EL +S Y DL F+ +F++ Sbjct: 7 IKIELSSPPLTVGNPLKN---AYSMQNVLNKSKASFVLFPELCLSSYTAGDLFFETTFLE 63 Query: 65 ACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A+D LK+++ +G ++G P E + N VI+ I+ + K +PNY EF Sbjct: 64 QNFQALDWLLKNNSFEGV--YILGMPLALHEVLFNVAVIIQKDKILGITPKKTIPNYKEF 121 Query: 124 HEKRTFISG 132 EKR F SG Sbjct: 122 SEKRWFQSG 130 >gi|297570514|ref|YP_003691858.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfurivibrio alkaliphilus AHT2] gi|296926429|gb|ADH87239.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfurivibrio alkaliphilus AHT2] Length = 314 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 8/156 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++AI Q +P + + N+ + E QG LI+F EL ++GY + + ++ Sbjct: 1 MQVAICQTSPQLFAVEQNLEQVIERIEHHRAQGAGLIIFPELALTGYFV-GARYHEMALR 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S I L + T G VVGF + + N+ ++ G I+ KINLPNY F Sbjct: 60 LDSPQIARLAAATK--GTAAVVGFIEESRSMNFYNAALVAVDGEILFCYRKINLPNYGVF 117 Query: 124 HEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS 157 EK+ F SG P VFR + + + IC D+W S Sbjct: 118 EEKK-FFSGGKRVP-VFRLGEFNVAVFICNDLWHPS 151 >gi|258578433|ref|XP_002543398.1| glutamine-dependent NAD(+) synthetase synthase [glutamine-hydrolyzing]) [Uncinocarpus reesii 1704] gi|237903664|gb|EEP78065.1| glutamine-dependent NAD(+) synthetase synthase [glutamine-hydrolyzing]) [Uncinocarpus reesii 1704] Length = 713 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 136/597 (22%), Positives = 209/597 (35%), Gaps = 138/597 (23%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A LN D GN A+ + + A + G L + EL ISGY D + Sbjct: 7 VATCSLNQWALDWEGNAARIVESIKRAKQAGAKLRVGPELEISGYDCLDHFLENDVYLHS 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + +D G + VG P + N VI G I+ +R K+ L N + E Sbjct: 67 WEMMARILADEECHGILLDVGMPIMHRNLRFNCRVIAIDGKILLIRPKVWLANDGNYREM 126 Query: 127 RTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSNICK 161 R F + G + P I D LG CE+++ + Sbjct: 127 RYFTPWERPRHVEEYYLPRIIQRLQGSTKVPFGDAVISTPDTCLGAETCEELFTPAGPHA 186 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN-QVGGQDELIFDGAS 220 H+ G E + + S + KL +R ++ +Y N Q GG + L +DG S Sbjct: 187 HMGLNGVEIFTNSSGSHHSLRKLDQRISLILEATRKSGGIYLYSNLQGGGGERLYYDGCS 246 Query: 221 F------------------------CFDGQQQLAFQ---------MKHFSEQNFMTEWHY 247 D +Q AF+ ++ + T + Sbjct: 247 MIVVNGEIVAQGSQFSLNDVEVVTATVDLEQVRAFRFAPSRGLQAVRAPEYRRIETPFSL 306 Query: 248 DQQLSQWN-YMSDDSASTMYIPLQEEE-ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + Q + ++S M L EEE A AC L DY++++ ++ LSGGIDS Sbjct: 307 SAESDQLDPHLSPSPPLDMRYHLPEEEIALGPACWLW--DYLRRSQLAGFLLPLSGGIDS 364 Query: 306 ALCAAI-------AVDALGKENVQTI--------------MLP--------------YKY 330 A I ++A+ N Q I LP Y Sbjct: 365 CATAIIVFSMCRLVIEAIENGNDQVIADVKRIAGVYEKEGWLPKTPQELSHNIFHTVYMG 424 Query: 331 TSPQSLEDAAACAK----ALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-----SGIVAE- 380 + QS ++ + AK A+G + L I D+ N ++ EP G AE Sbjct: 425 MASQSSKETRSRAKELSNAIGAYHVDLNIDDIFNAQKDTFTKATGFEPKFKVYGGTQAEN 484 Query: 381 ----NIQSRIRGNILMALSNHSKAMLLT--------------TSNKSEISVGYGTLYGDM 422 NIQ+R R M + +L T ++N E GY T Y Sbjct: 485 LALQNIQARTR----MVTAYEFSQLLPTVRKRPGGGGLLVLGSANCDEALRGYFTRYDCS 540 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 S NP+ + KT + + +W P+ E L +P+AEL P D Sbjct: 541 SADINPIGSISKTDLKRFIAWAQRDFDL----PILE----DFLNATPTAELEPITKD 589 >gi|297162382|gb|ADI12094.1| NAD+ synthetase [Streptomyces bingchenggensis BCW-1] Length = 679 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 22/247 (8%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A V+ D N R R+G+ + +F EL +SGY EDL+ + + + Sbjct: 13 RVAACTGRTVIADPHANAEAVLRQGRRCAREGVAVAVFPELCLSGYSIEDLLLQDALLDQ 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ + + + D +VVG P + + V N V++ G ++ V K +PNY E +E Sbjct: 73 VEAALGAVVAGSADLLTVLVVGAPLRHRNRVYNCAVMVHRGRVLGVVPKSYVPNYRELYE 132 Query: 126 KRTFISGYSNDPIVFR-----------------DIRLGIL---ICEDIWKNSNICKHLKK 165 +R +G R D+ +L ICED+W Sbjct: 133 RRQIAAGDDERGGTIRVDGAMVPFGVDLLFAAQDVPGLVLHAEICEDMWVPVPPSAEAAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 193 AGATVLVNLSGSPITVGRAEDRRLLCRSASARCLAAYVYAAAGLGESTTDLSWDGQTMIY 252 Query: 224 DGQQQLA 230 + LA Sbjct: 253 ENGVLLA 259 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 20/238 (8%) Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALGKE--NVQTIMLPYKY 330 Y+ V L+ + KV+IG+SGG+DS + AA A+D G+ ++ LP Sbjct: 345 YSIQVAGLQQRLATIGGPKVVIGVSGGLDSTHALIVAARAMDRAGRPRGDILAFTLPGFA 404 Query: 331 TSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRI 386 TS + ++A ALG + D+ P L+ + F EP I EN+Q+ + Sbjct: 405 TSDHTKDNAHKLMHALGVTAAELDITPTARLM--LREMGHPFASGEPVYDITFENVQAGL 462 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRN 445 R + L L+N ++L T + SE+++G+ T GD +N + KT + L W Sbjct: 463 RTDYLFRLANQRGGVVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWV- 521 Query: 446 SHGITSG-LGPLTEVIPPSILEKSPSAELRPH---QTDQESLPPYPILDDIIKRIVEN 499 I SG T +IL+ S EL P Q+ + + PY + D + ++ + Sbjct: 522 ---IGSGQFDEETGATLAAILDTEISPELVPGKEPQSTESQIGPYALHDFTLHHVLRH 576 >gi|260893340|ref|YP_003239437.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ammonifex degensii KC4] gi|260865481|gb|ACX52587.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ammonifex degensii KC4] Length = 242 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 15/226 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ + + N A R E A R+G+ L+ F E+ ++GY P+ L K F Sbjct: 1 MRVGVAQ-TFIADTLTENEATILRMAELAARRGVKLLAFPEMSLTGYHPQTLT-KPGFEA 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + + G++VG + + N+ +L KINL Sbjct: 59 ELDRSLTRIARRARELDIGLIVGRAELGGKKLFNAATVLLPDGTACTYRKINLTE----Q 114 Query: 125 EKRTFISGYSNDPIV--FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY--- 179 E F G + P+V FRD + G++IC D + + L+++GA+ LF L A Y Sbjct: 115 EAPYFTPG--DKPLVFTFRDYKFGVIICRD-QNYPELARQLRREGADALFILAAHFYPPK 171 Query: 180 -YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 KL K + + ++ N VG L+ G S D Sbjct: 172 EARWKLPKNRALPIARAVENGFYVLLANAVGSHLGLVSLGNSLIAD 217 >gi|295134395|ref|YP_003585071.1| carbon-nitrogen hydrolase family protein [Zunongwangia profunda SM-A87] gi|294982410|gb|ADF52875.1| carbon-nitrogen hydrolase family protein [Zunongwangia profunda SM-A87] Length = 242 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 13/167 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI I Q P+ GDI NI K + E A + D I+F EL+++GY PE + K Sbjct: 1 MKICITQTEPIKGDINRNIEKHLQFIERAIKSKADAIIFPELYLTGYEPE--LAKNLATD 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D + + D I VG P + G S++I + I + K Y Sbjct: 59 INDQRLDVFQKISDDNQILIGVGLPTKIGNGTCISMLIFQPNSPIKIYSK----KYLHPG 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK---QGA 168 E++ F+ G + P +++ +LG IC ++NS I +H KK QGA Sbjct: 115 EEKFFVPGENLLPFNYKNNKLGFAIC---YENS-IPEHSKKIYDQGA 157 >gi|291562588|emb|CBL41404.1| N-carbamoylputrescine amidase [butyrate-producing bacterium SS3/4] Length = 288 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 23/269 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++K+K+A Q+ D+ NIA A R +A G +IL ELF Y ++ ++ Sbjct: 1 MRKVKVAAVQMR-CTRDVNANIANAERLVRKAAGDGAQIILLPELFERQYFCQERQYEYY 59 Query: 61 SFIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 F + + A+ + + + F +D + + N+V ILDA G + + K ++ Sbjct: 60 EFAKPVEENDAVKHFAKVAEELKVVLPISFYEKDGKRLFNTVAILDADGTNLGIYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + R +G+ IC D W + + +GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGDTGFKAFKTRYGTIGVGICWDQW-FPETARFMAVKGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQVGGQD------------ELIFDGAS 220 + + P + + + G + +P+I N+VG ++ L F G+S Sbjct: 179 IGSEPILSVDSMPHWRRCMQGHSASNLMPVIAANRVGLEEVTPCEANGNQKSALKFYGSS 238 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 F DG ++ M SE E+ D+ Sbjct: 239 FITDGAGEVIRSMDRDSEGVITAEFDLDE 267 >gi|255994733|ref|ZP_05427868.1| glutamine-dependent NAD(+) synthetase [Eubacterium saphenum ATCC 49989] gi|255993446|gb|EEU03535.1| glutamine-dependent NAD(+) synthetase [Eubacterium saphenum ATCC 49989] Length = 633 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 27/286 (9%) Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQS 335 ++L ++ K ++G SGG+DS L + AL +++ +M+P S + Sbjct: 344 MALAGRAKRIGLKKFVVGFSGGLDSTLVLFVVKQALQYMGGSMDDLIAVMMPGLGNSEKI 403 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 +A K LG K+ + I + V F + S EN Q+R R ILM ++ Sbjct: 404 QTNAGIILKELGIKHRNISIKEAVLSHFKDIGHAPDVYDS--TYENAQARERTQILMDIA 461 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG--- 452 N A++ + + SEI++G+ T GD ++ L KT + ++ + + + S Sbjct: 462 NMEGAIMPGSGDMSEIALGWSTYGGDHMAMYDVNAGLPKTVIKRMIADIAACDLVSEKLK 521 Query: 453 ---LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDII----------KRIVEN 499 + L I P +L E+ Q +ES+ Y + D + + I++ Sbjct: 522 EALVNVLNAPISPELLPLDSKGEV--SQNTEESIGSYELHDFFLYYKLRYIMEDRLILQR 579 Query: 500 EES--FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 +S + D++Y ++T E+KR+ AP G + SF Sbjct: 580 AKSAFYKKYDEDYIEKTFSIFNKRFKSQEFKRKGAPEGLSLCDVSF 625 >gi|307323323|ref|ZP_07602533.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces violaceusniger Tu 4113] gi|306890812|gb|EFN21788.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces violaceusniger Tu 4113] Length = 281 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 22/263 (8%) Query: 5 LKIAIAQLNPVVGDIAGNI----AKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 +KI+ Q GD+ N+ A RRAR E G +L++ TELF++GY D V Sbjct: 15 MKISGLQTAGTPGDVGANLHELDAACRRARAE----GAELLITTELFVTGYDIGDAVRDL 70 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPN 119 + S A + S G +V+G P D NS +D AG ++A K +L Sbjct: 71 ARTDLLSPAREIATSH----GIALVLGAPEYDSGACYNSAFFIDPAGAVLARHRKNHL-- 124 Query: 120 YSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E ++R F G P++ + +R+ +LIC D+ N+ + GA+ + A Sbjct: 125 FGEL-DRRYFTPGDRPAPVIDYEGVRIAMLICYDVEFPENV-RAAALAGADLVAVPTAQM 182 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + + + V + ++ I YVN G + L + G S + +H + Sbjct: 183 QPYEFIAEHLLRVRAWENQIY--IAYVNHDGDEGSLRYVGRSSIVSPSATVLDSAEHGNR 240 Query: 239 QNFMT-EWHYDQQLSQWN-YMSD 259 F T + H +Q + N Y++D Sbjct: 241 LLFATVDPHTVRQARKANPYLAD 263 >gi|326336161|ref|ZP_08202333.1| NAD+ synthetase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691670|gb|EGD33637.1| NAD+ synthetase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 259 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 6/164 (3%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L DY+Q+ + ++IG+SGGIDSA+ +A+ A + V + +P Q + Sbjct: 14 LLDYLQQTDIQGMVIGISGGIDSAVVSALC--ARTGKPVLCLEMPIHQAQNQ-INRGKQH 70 Query: 343 AKALGCKY-DVLPIH-DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 L KY +V + +L + F + ++Q + + + N ++R+R L + + Sbjct: 71 INFLKEKYTNVSNLQVELTSVFDTFIAQLPPAQNNALALANTRARLRMTTLYYFAGLHRY 130 Query: 401 MLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 M++ T NK E VG+ T YGD +P+ DL K+QV+++A + Sbjct: 131 MVVGTGNKIEDFGVGFFTKYGDGGVDVSPIADLMKSQVYEIAEY 174 >gi|22127200|ref|NP_670623.1| hypothetical protein y3324 [Yersinia pestis KIM 10] gi|45443242|ref|NP_994781.1| putative carbon-nitrogen hydrolase [Yersinia pestis biovar Microtus str. 91001] gi|51597520|ref|YP_071711.1| carbon-nitrogen hydrolase [Yersinia pseudotuberculosis IP 32953] gi|108806324|ref|YP_650240.1| putative carbon-nitrogen hydrolase [Yersinia pestis Antiqua] gi|108813295|ref|YP_649062.1| carbon-nitrogen hydrolase [Yersinia pestis Nepal516] gi|145597884|ref|YP_001161960.1| carbon-nitrogen hydrolase [Yersinia pestis Pestoides F] gi|149367053|ref|ZP_01889086.1| putative carbon-nitrogen hydrolase [Yersinia pestis CA88-4125] gi|153948185|ref|YP_001399817.1| N-carbamoylputrescine amidohydrolase [Yersinia pseudotuberculosis IP 31758] gi|162420690|ref|YP_001607682.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis Angola] gi|165925074|ref|ZP_02220906.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Orientalis str. F1991016] gi|165937294|ref|ZP_02225858.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Orientalis str. IP275] gi|166010293|ref|ZP_02231191.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Antiqua str. E1979001] gi|166212796|ref|ZP_02238831.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Antiqua str. B42003004] gi|167400098|ref|ZP_02305616.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421962|ref|ZP_02313715.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426693|ref|ZP_02318446.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468157|ref|ZP_02332861.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis FV-1] gi|186896643|ref|YP_001873755.1| N-carbamoylputrescine amidase [Yersinia pseudotuberculosis PB1/+] gi|218928110|ref|YP_002345985.1| putative carbon-nitrogen hydrolase [Yersinia pestis CO92] gi|229837630|ref|ZP_04457792.1| putative carbon-nitrogen hydrolase [Yersinia pestis Pestoides A] gi|229840857|ref|ZP_04461016.1| putative carbon-nitrogen hydrolase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842583|ref|ZP_04462738.1| putative carbon-nitrogen hydrolase [Yersinia pestis biovar Orientalis str. India 195] gi|229903758|ref|ZP_04518871.1| putative carbon-nitrogen hydrolase [Yersinia pestis Nepal516] gi|270487536|ref|ZP_06204610.1| N-carbamoylputrescine amidase [Yersinia pestis KIM D27] gi|294502899|ref|YP_003566961.1| putative carbon-nitrogen hydrolase [Yersinia pestis Z176003] gi|21960266|gb|AAM86874.1|AE013933_11 hypothetical [Yersinia pestis KIM 10] gi|45438110|gb|AAS63658.1| putative carbon-nitrogen hydrolase [Yersinia pestis biovar Microtus str. 91001] gi|51590802|emb|CAH22448.1| putative carbon-nitrogen hydrolase [Yersinia pseudotuberculosis IP 32953] gi|108776943|gb|ABG19462.1| carbon-nitrogen hydrolase [Yersinia pestis Nepal516] gi|108778237|gb|ABG12295.1| putative carbon-nitrogen hydrolase [Yersinia pestis Antiqua] gi|115346721|emb|CAL19604.1| putative carbon-nitrogen hydrolase [Yersinia pestis CO92] gi|145209580|gb|ABP38987.1| carbon-nitrogen hydrolase [Yersinia pestis Pestoides F] gi|149290667|gb|EDM40743.1| putative carbon-nitrogen hydrolase [Yersinia pestis CA88-4125] gi|152959680|gb|ABS47141.1| N-carbamoylputrescine amidohydrolase [Yersinia pseudotuberculosis IP 31758] gi|162353505|gb|ABX87453.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis Angola] gi|165914768|gb|EDR33381.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Orientalis str. IP275] gi|165923274|gb|EDR40425.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990779|gb|EDR43080.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Antiqua str. E1979001] gi|166206088|gb|EDR50568.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960099|gb|EDR56120.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050806|gb|EDR62214.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054296|gb|EDR64115.1| N-carbamoylputrescine amidohydrolase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186699669|gb|ACC90298.1| N-carbamoylputrescine amidase [Yersinia pseudotuberculosis PB1/+] gi|229679528|gb|EEO75631.1| putative carbon-nitrogen hydrolase [Yersinia pestis Nepal516] gi|229690893|gb|EEO82947.1| putative carbon-nitrogen hydrolase [Yersinia pestis biovar Orientalis str. India 195] gi|229697223|gb|EEO87270.1| putative carbon-nitrogen hydrolase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704318|gb|EEO91329.1| putative carbon-nitrogen hydrolase [Yersinia pestis Pestoides A] gi|262360934|gb|ACY57655.1| putative carbon-nitrogen hydrolase [Yersinia pestis D106004] gi|262364874|gb|ACY61431.1| putative carbon-nitrogen hydrolase [Yersinia pestis D182038] gi|270336040|gb|EFA46817.1| N-carbamoylputrescine amidase [Yersinia pestis KIM D27] gi|294353358|gb|ADE63699.1| putative carbon-nitrogen hydrolase [Yersinia pestis Z176003] gi|320013980|gb|ADV97551.1| putative carbon-nitrogen hydrolase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 294 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQELDN--SPLIKHFSKLAAELEVVLPLSFFEKANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALLGAEVIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPEIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKYIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|194895387|ref|XP_001978242.1| GG19493 [Drosophila erecta] gi|190649891|gb|EDV47169.1| GG19493 [Drosophila erecta] Length = 787 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 131/601 (21%), Positives = 229/601 (38%), Gaps = 138/601 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN + ++ EA G EL + GY ED F++ Sbjct: 1 MGRKVTVAVSTLNQWALDFEGNTVRILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + ++ + S + + VG P + N V I+ +R K+ + Sbjct: 60 PDTFLHSWEVLLEVMMSPVCENML-VDVGMPVMHRNVAYNCRVAFFNRQILLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD LG ICE++ Sbjct: 119 DDGNYRESRWFTAWTKALQTEEHVLPRMMAQHTDQQTVPFGDAVIATRDTCLGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL----PIIYVNQVG 209 W + KH++ A +N+S Y +L+K H I + I + ++ N G Sbjct: 179 WNVRS--KHIEMSLAGVELIVNSSGSYM-ELRKAH-ITSDLIRNASFKAGGAYLFSNLRG 234 Query: 210 GQDELI-FDGAS-FCFDGQ-----QQLAFQ-------------------------MKHFS 237 + + F+G S +G+ QQ A Q M S Sbjct: 235 CDGQRVYFNGCSAIALNGEILARSQQFALQDVEVTLATIDLEEIRAYRVSLRSRCMAAAS 294 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKNNFHK 294 + + D ++S + + S + +P+ +EE A AC L DY++++ Sbjct: 295 AAEY-PRIYCDFEMSTHSDIFKTSTPPLKLPVHTPEEEIALGPACW--LWDYLRRSGQGG 351 Query: 295 VIIGLSGGIDSALCAAI----------AV---DALGKENVQTIMLPYKYT---------- 331 + LSGG+DS+ A I AV DA +++ I+ YT Sbjct: 352 FFLPLSGGVDSSSSATIVHSMCRQIVQAVQLGDAQVLHDIRQILADSDYTPDNAAGLCNR 411 Query: 332 ------------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----- 374 S ++ AA A LG + + I VN S+ + P Sbjct: 412 LLVTCYMGSVNSSKETRRRAAQLANQLGSYHIEISIDSAVNALLSIFNTVTGLTPRFWTQ 471 Query: 375 -----SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGD 421 + +N+QSRIR +++ + N +L L ++N E GY T Y Sbjct: 472 GGCARQNLALQNMQSRIRMVLAYIFAQLMLWVRNRPGGLLVLGSANVDESLRGYLTKYDC 531 Query: 422 MSGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 S NP+ + K + + ++ ++ + P+ E SI++ P+AEL P Q + Sbjct: 532 SSADINPIGGISKMDLRRFLTYAKDKFNL-----PVLE----SIIDAPPTAELEPLQENG 582 Query: 481 E 481 E Sbjct: 583 E 583 >gi|241895153|ref|ZP_04782449.1| NAD synthetase [Weissella paramesenteroides ATCC 33313] gi|241871459|gb|EER75210.1| NAD synthetase [Weissella paramesenteroides ATCC 33313] Length = 274 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 52/270 (19%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ------TIMLPYKYTSP 333 L+DY+++ +++G+SGG DS L A AV+ L +E + LPY + Sbjct: 31 LKDYLKQTGLKTLVLGISGGQDSTLAGKLAQFAVEQLREETGDGEYQFIAMRLPYNEQAD 90 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 +S DA A K V VN S++ + E +G+ NI++R R Sbjct: 91 ES--DALAAIKWQEADKTV-----TVNIEESVLGVVHELEAAGVPVTDFNKGNIKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 ++ K +++ T + +E G+ T +GD + PL L K Q QL ++ + Sbjct: 144 IAQYGVAAAYKGVVIGTDHAAEALAGFYTKFGDGAADITPLYRLNKRQGRQLLAYLGA-- 201 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 P + EK P+A+L RP Q D+ +L Y +DD ++ Sbjct: 202 ------------PATFYEKVPTADLEEDRPGQPDEVALGVTYDAIDDYLE---------- 239 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 +E ++ +E L +E+KRRQ PV Sbjct: 240 --GKEVSEADALQIERLYTSTEHKRRQ-PV 266 >gi|149186391|ref|ZP_01864704.1| hydrolase [Erythrobacter sp. SD-21] gi|148829980|gb|EDL48418.1| hydrolase [Erythrobacter sp. SD-21] Length = 287 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 15/220 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 +++L +++ QL D A NIA EEA R+G +IL ELF Y E+ +F Sbjct: 1 MRELTVSVLQLALARADEADNIAAVGALVEEAARKGAQVILPPELFAGDYFCREEEEELF 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 ++ A ++ ++ G I F +D N++ ++ G I+ K ++ Sbjct: 61 ARARPLAEDPSVRAMQELAGKLGVAIPTSFFERDGHHYYNTLAMIGPDGQIMGTYRKCHI 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 P+ + EK F G ND D+ R+G+ IC D W + + +GAE LF Sbjct: 121 PDGPGYEEKYYFRPG--NDGFKVWDVFGARIGVGICWDQW-YPECARVMALKGAEVLFYP 177 Query: 173 -SLNASPYYHNKLKKR--HEIVTGQISHVHLPIIYVNQVG 209 ++ + PY + R + G +P+ N++G Sbjct: 178 TAIGSEPYDADLDTSRMWRRAMIGHAVSNCMPVCAANRIG 217 >gi|170023084|ref|YP_001719589.1| N-carbamoylputrescine amidase [Yersinia pseudotuberculosis YPIII] gi|169749618|gb|ACA67136.1| N-carbamoylputrescine amidase [Yersinia pseudotuberculosis YPIII] Length = 294 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CSWDLPKNIENAEKLVRQAHARGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQELDN--SPLIKHFSKLAAELEVVLPLSFFEKANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALLGAEVIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPEIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKYIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|302760849|ref|XP_002963847.1| hypothetical protein SELMODRAFT_166255 [Selaginella moellendorffii] gi|300169115|gb|EFJ35718.1| hypothetical protein SELMODRAFT_166255 [Selaginella moellendorffii] Length = 699 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 141/613 (23%), Positives = 229/613 (37%), Gaps = 153/613 (24%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED-LVFKK 60 ++ + +A++ LN N++ +++ A G + EL ++GY ED + ++ Sbjct: 1 MRLVNLAVSSLNQWAMSFDHNLSNTKQSIAIARESGAAFRVGPELELTGYGCEDHFLERE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVL-NSVVILDAGNIIAVRDKINL 117 + I A + L S DG IV +G P EGVL N V G I+ VR K + Sbjct: 61 TCITAWECLAEILSSGLTDG---IVCDIGLPVL-HEGVLYNCRVFCLNGEILLVRPKKFM 116 Query: 118 PNYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICED 152 N + E R F S + + + F+D L CE+ Sbjct: 117 ANDGNYRELRWFSSWKRHKVVTSLNLPECVQAIKSQRTAPFGDAYLSFQDTDLASECCEE 176 Query: 153 IWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEI-----VTGQISHVHLPIIYVNQ 207 ++ L G + + N S +H K+R + VT + V+L Y NQ Sbjct: 177 LFTPKQASSGLALHGVQIIS--NGSGSHHQLRKQRTRLRLMKNVTERCGGVYL---YANQ 231 Query: 208 VGGQ-DELIFDG-ASFCFDGQQQLAFQMKHFSEQ---------------NF-MTEWHYDQ 249 G L +DG AS +G ++ Q + FS + NF ++ + + Sbjct: 232 QGCDGGRLYYDGCASVVMNG--EVILQGRQFSLRDVDVCTVCLDLDEVVNFRASKSSFRE 289 Query: 250 QLSQWNYMS--DDSAS------------------TMYIPLQEEEADYNACVLSLRDYVQK 289 Q S+ M+ + +AS T ++P ++E A AC L DY+++ Sbjct: 290 QASERRSMACVNVAASLCELSSSRSLRISRPLKATRFLP-EQEIALGPACWLW--DYLRR 346 Query: 290 NNFHKVIIGLSGGIDSALCAAIA-------------------VDALGKENVQ-------- 322 + ++ LSGG DS+ AAI DA N + Sbjct: 347 SGASGYLLPLSGGADSSAVAAIVGSMCQLVIKAIHENDKRVLTDARRIGNYKPDEEPADS 406 Query: 323 ---------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 T+ + + +S ++ A A+ +G + L I +VN SL Sbjct: 407 QEFASRIFYTVYMASQNSSTETQSRAQQLAREIGSNHWNLKIDMVVNALISLFCGLTGRI 466 Query: 374 P-----SG-----IVAENIQSRIRGNI------LMALSNHSKAMLLT--TSNKSEISVGY 415 P SG + +N+Q+R+R I L+ K LL +SN E GY Sbjct: 467 PRYKVDSGTPVENLALQNLQARVRMVISYMLASLLPWVGRKKGFLLVLGSSNADESIRGY 526 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T Y S NP+ + K + W G L + + P+AEL P Sbjct: 527 MTKYDCSSADINPIGGISKRDLRAFLRW--------GAQKLGFPVLAQVEAAPPTAELEP 578 Query: 476 -----HQTDQESL 483 QTD+E + Sbjct: 579 SSDGYKQTDEEDM 591 >gi|289676104|ref|ZP_06496994.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae pv. syringae FF5] Length = 264 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ D++GN+ + + + A QG +++ E+F+SGY + Sbjct: 1 MRVALYQCPPLPLDVSGNLTRLEQQAQTAAEQGAQVLICPEMFLSGYNIGAQAVDELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + N+V ++D+ L NY + Sbjct: 61 QDGPAATRIAAIAQASGIAILYGYPERAADRQIYNAVQLIDS-------QGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H +K F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSDLDKSMFAAGDDHYPVVELNGWRLGLLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + + R H ++Y N G + + + G +S C DG + L Sbjct: 173 MLPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGAICYCGLSSLCAPDGSRPL 224 >gi|228473624|ref|ZP_04058376.1| NAD+ synthetase [Capnocytophaga gingivalis ATCC 33624] gi|228274996|gb|EEK13806.1| NAD+ synthetase [Capnocytophaga gingivalis ATCC 33624] Length = 258 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 51/220 (23%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAI-------------AVDALGKENVQTIM 325 L+DY+ + +++G+SGGIDSA LCA A + + + Sbjct: 14 LKDYLLQTGIKGMVVGISGGIDSAVVSTLCAETGKPVLCLEMPIHQAANQVSRGRNHIAF 73 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 L KY + SLE D+ P+ D + ++Q E + + N ++R Sbjct: 74 LKNKYPNVSSLE------------MDLTPVFD------TFVAQVPPAENNALALANTRAR 115 Query: 386 IRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 +R L + M++ T NK E VG+ T YGD +P+ DLYK++V+++ + Sbjct: 116 LRMTTLYYFAGLQGYMVVGTGNKIEDFGVGFFTKYGDGGVDVSPIGDLYKSEVYEVGRY- 174 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAEL-RPHQTDQESL 483 LG L P IL+ +P+ L +TD++ L Sbjct: 175 --------LGVL-----PEILQAAPTDGLFGDDRTDEDQL 201 >gi|294499429|ref|YP_003563129.1| carbon-nitrogen hydrolase [Bacillus megaterium QM B1551] gi|294349366|gb|ADE69695.1| carbon-nitrogen hydrolase [Bacillus megaterium QM B1551] Length = 256 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 26/263 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + I IAQ PV+G+ NI K ++A + DL++F EL ++GY D + K + Sbjct: 1 MNITIAQFCPVLGNKKENIRKINDCIKQAVSEQADLVVFPELCLTGYFIWDDI--KELAE 58 Query: 65 ACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYS 121 + S ++ + D V+ FP G + S +I D G +I K +L + Sbjct: 59 SVSGESLQLFQQSCRDHSIHAVISFPEVTANGHYHITSALIDDTGTVIGTYQKTHLFD-- 116 Query: 122 EFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLF--SLNAS 177 E F G N VF+ +G++IC D+ + + + LK +GA+ L N S Sbjct: 117 --KEAEIFRPG--NTLPVFKTKFGNIGLMICYDL-EFPEVARTLKIKGADLLIIPLANMS 171 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM---K 234 PY ++ + + LPI N++G +++ F G S + + ++ +M + Sbjct: 172 PYEDYQIT----YLKSRAMENELPIALCNRIGSEEDTFFFGHSAVVNSKGKVLLKMGSKE 227 Query: 235 HFSEQNFMTEWHYDQQLSQWNYM 257 S E DQ+L NY+ Sbjct: 228 QISTVAISLEESKDQKL---NYL 247 >gi|290561615|gb|ADD38207.1| Probable NH3-dependent NAD+ synthetase [Lepeophtheirus salmonis] Length = 257 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 7/167 (4%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ---SLEDA 339 L+ Y ++ + ++G+SGGIDSA+ + + +L V + LP Q S Sbjct: 14 LQKYAHESRVNGFVVGISGGIDSAVTSTLC--SLTGMKVICLNLPIHQVPAQVSRSDNHI 71 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A + G K D + +L F + + + N++SR+R + L A + H + Sbjct: 72 AWLKEKYGEKIDSHVV-NLTPTFDTACKDLPLDIQDQLTMANLRSRLRMSTLYAFAGHHR 130 Query: 400 AMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 ++ T NK E VG+ T YGD +P+ DL K+QV+ +AS N Sbjct: 131 CLVAGTGNKVEDFGVGFFTKYGDGGVDLSPIADLMKSQVYSIASHLN 177 >gi|328949750|ref|YP_004367085.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Marinithermus hydrothermalis DSM 14884] gi|328450074|gb|AEB10975.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Marinithermus hydrothermalis DSM 14884] Length = 286 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 10/249 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ QL P G I N+A + A + ++++ E + +GY + V + + Q Sbjct: 2 IRHAVLQLRPEKGHIKQNLAHLKEALLALKPERPEVVVLPEAYPTGYFLQGGVRELALTQ 61 Query: 65 A-CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN--IIAVRDKINLPNYS 121 A+ L ++ +V+GF +D NS L+ G I+ V K+ LP Y Sbjct: 62 EELHEALAELHAEVWKDPLDLVIGFYERDGGEYYNSAAYLELGGRGILHVHRKVFLPTYG 121 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E+R G+ R R +LICED W +S GAE ++ +ASP Sbjct: 122 VFDEERFLARGHDVRAFDTRFGRAAVLICEDFW-HSITATIAALDGAEVIYVPSASPARG 180 Query: 182 NKLKKRHEIVTGQISHVH------LPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 K+ + + L ++ + VG + + G S + L + Sbjct: 181 FTGKEPANVARWKALAAAVAAEHGLYVVLASLVGAEGGKMLSGGSVVAGPEGGLLAEAPL 240 Query: 236 FSEQNFMTE 244 F E +TE Sbjct: 241 FEEALLLTE 249 >gi|238798619|ref|ZP_04642094.1| N-carbamoylputrescine amidase [Yersinia mollaretii ATCC 43969] gi|238717505|gb|EEQ09346.1| N-carbamoylputrescine amidase [Yersinia mollaretii ATCC 43969] Length = 294 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + F + NS+V++DA G ++ V K Sbjct: 60 ALAQELDN--SPLIQHFSKLAAELQVVLPLSFFEKANNAYYNSLVMIDADGAVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALLGAEVIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPEIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKFIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|224075164|ref|XP_002304569.1| predicted protein [Populus trichocarpa] gi|222842001|gb|EEE79548.1| predicted protein [Populus trichocarpa] Length = 730 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 127/595 (21%), Positives = 205/595 (34%), Gaps = 123/595 (20%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ LK+A LN D N+ + + +A + G + L EL I+GY ED + Sbjct: 1 MRLLKVATCNLNQWAMDFDCNLNNIKESITQAKQAGAVIRLGPELEITGYGCEDHFLELD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I + + G +G P N V+ II +R K+ L N Sbjct: 61 TINHGWECLKEILVGDWTDGILCSIGMPVIKGSERYNCQVLCFNRKIIMIRPKMWLANDG 120 Query: 122 EFHEKRTFISGYSNDPIV-------------------------FRDIRLGILICEDIWKN 156 + E R F + D +V F D + +CE+++ Sbjct: 121 NYRELRWFTAWKHKDQLVDFQLPSEIAEAVLQQSVPFGYGYVRFLDTAVAAEVCEELFTP 180 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-ELI 215 L G E + + S + KL R G +Y NQ G L Sbjct: 181 IPPHAELALNGVEVFMNASGSHHQLRKLDVRLRAFIGATHTRGGVYMYSNQQGCDGGRLY 240 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEW----------------HYDQQLSQWNYMSD 259 +DG S C ++ Q FS ++ + +Q S N +S Sbjct: 241 YDGCS-CVVVNGEVVVQGSQFSLRDIEVVTAQVDLDAVASLRGSISSFQEQASCKNTVSS 299 Query: 260 -----------DSASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + ++ PLQ EEE + L DY++++ ++ LSGG Sbjct: 300 VLVPYKLCQPFNMQMSLSSPLQINYHSPEEEIAFGPGCW-LWDYLRRSGASGFLLPLSGG 358 Query: 303 IDSALCAAIA-------------------VDAL-----------------GKENVQTIML 326 DS+ AAI DA+ K T+ + Sbjct: 359 ADSSSVAAIVGCMCQLVVKEIEEGDEQVKADAIRIGNYTDGQFPTDSKEFAKRIFYTVFM 418 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------G 376 + +S + + A A +G + + I +V+ SL + P Sbjct: 419 GSENSSEYTKKRAKDLADEIGSWHLDVSIDGVVSALLSLFQTLTGKRPCYKVDGGSNIEN 478 Query: 377 IVAENIQSRIRGNILMALSN-----HSKA---MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +NIQ+RIR + L++ HSK ++L +SN E GY T Y S NP Sbjct: 479 LGLQNIQARIRMVLAFMLASLLPWVHSKPGFYLVLGSSNVDEGLRGYLTKYDCSSADINP 538 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + + K + W H S L + E P P+AEL P +++ L Sbjct: 539 IGSISKQDLRAFLRWAAVHLGYSSLAEI-EAAP-------PTAELEPIRSNYSQL 585 >gi|238795049|ref|ZP_04638642.1| N-carbamoylputrescine amidase [Yersinia intermedia ATCC 29909] gi|238725597|gb|EEQ17158.1| N-carbamoylputrescine amidase [Yersinia intermedia ATCC 29909] Length = 294 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 117/280 (41%), Gaps = 26/280 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + +A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CSWDLPKNIENAEKLVRQAHAKGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + F + NS+V++DA G+++ V K Sbjct: 60 ALAQELDN--SPLIKHFAKLAAELEVVLPLSFFEKANNAYYNSLVMIDADGSVLDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALLGAEIIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD-------ELIFDGASFC 222 ++ + P Y + H + G + +P+I N++G + E+ F G+SF Sbjct: 177 TAIGSEPAYPEIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKFIAGLEMTFYGSSFI 236 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSD 259 D L Q E + E+ + Q + W D Sbjct: 237 ADQTGALLAQANKTDEAVLVHEFDLQEIAAQRASWGLFRD 276 >gi|52078821|ref|YP_077612.1| NAD synthetase [Bacillus licheniformis ATCC 14580] gi|52784192|ref|YP_090021.1| NAD synthetase [Bacillus licheniformis ATCC 14580] gi|319648886|ref|ZP_08003095.1| NH(3)-dependent NAD(+) synthetase [Bacillus sp. BT1B_CT2] gi|81691217|sp|Q65NN6|NADE_BACLD RecName: Full=NH(3)-dependent NAD(+) synthetase gi|52002032|gb|AAU21974.1| NH3-dependent NAD+ synthetase [Bacillus licheniformis ATCC 14580] gi|52346694|gb|AAU39328.1| NadE [Bacillus licheniformis ATCC 14580] gi|317388880|gb|EFV69698.1| NH(3)-dependent NAD(+) synthetase [Bacillus sp. BT1B_CT2] Length = 272 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 40/260 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQS 335 L+ Y++K ++G+SGG DS L A +AV+ L +E +Q + LPY Q Sbjct: 30 LKSYLKKTGAKGFVLGISGGQDSTLAGRLAQLAVEELREEGIQAEFIAVRLPYGVQ--QD 87 Query: 336 LEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA K + K I V F + E + N+++R+R A+ Sbjct: 88 EDDAQLALKFIQPDKSFAFDIASTVGSFAAQYQSVTGEALADFHKGNVKARVRMITQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 ++ +++ T + +E G+ T YGD PL L K R + LG Sbjct: 148 GGQNQLLVIGTDHAAEAVTGFFTKYGDGGADLLPLTGLTK---------RQGRSLLEELG 198 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 P + KSP+A+L +P Q+D+ L Y +DD ++ + Sbjct: 199 A-----PERLYTKSPTADLLDEKPQQSDETELGLTYDNIDDYLE------------GKAV 241 Query: 511 NDETVRYVEHLLYGSEYKRR 530 + E +E SE+KR+ Sbjct: 242 SSEVAEAIEKRYKASEHKRQ 261 >gi|220911429|ref|YP_002486738.1| NAD synthetase [Arthrobacter chlorophenolicus A6] gi|219858307|gb|ACL38649.1| NAD+ synthetase [Arthrobacter chlorophenolicus A6] Length = 277 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 28/227 (12%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTS 332 V L++Y++ ++G+SGG+DS+L + AV+ L E V+ + LPY Sbjct: 28 VTFLKEYLKATGTKGFVLGISGGLDSSLAGKLAQQAVEELEAEGVEANFVAVRLPYGVQH 87 Query: 333 PQSLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 + EDA A + K + I V+ F + E S N ++R R Sbjct: 88 DE--EDAQAALDFIKAKTEWTFNISAAVDGFEDEFEKTAGSEISDFHKGNTKARTRMIAQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 AL+ +++ T + +E G+ T +GD PL L K R + + + Sbjct: 146 YALAGEFNYLVIGTDHGAESVTGFFTKFGDGGADILPLFGLNK---------RQNRALLA 196 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P I EK P+A+L RP +TD++ L Y +DD ++ Sbjct: 197 ELGA-----PARIWEKVPTADLLDDRPGRTDEDELGISYDKIDDYLE 238 >gi|255625043|ref|XP_002540572.1| conserved hypothetical protein [Ricinus communis] gi|223494955|gb|EEF21811.1| conserved hypothetical protein [Ricinus communis] Length = 183 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 8/176 (4%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSA---LCAAIAVDALG--KENVQTIMLPYKYTSPQSL 336 +L + + KV+IG+SGG+DS L A +D L + N+ +P TS ++L Sbjct: 1 ALAQRLVTSGLKKVVIGISGGLDSTHALLVCARVMDKLKLPRTNILAYTMPGFATSERTL 60 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMAL 394 + A A K +GC + I + E E I EN+Q+ R N L L Sbjct: 61 KQAHALMKLVGCSAQEIDIRPSCIQMLKDLGHPYSEGKEQYDITFENVQAGERTNHLFRL 120 Query: 395 SNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +NH +++ T + SE+++G+ T GD +N + KT + L W G+ Sbjct: 121 ANHHGGLVIGTGDLSELALGWCTYGVGDHMSHYNVNASVPKTLISHLVRWVAESGV 176 >gi|321469616|gb|EFX80596.1| hypothetical protein DAPPUDRAFT_196799 [Daphnia pulex] Length = 725 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 125/598 (20%), Positives = 216/598 (36%), Gaps = 121/598 (20%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A+ LN D GN+++ + +EA QG EL ++GY ED ++ Sbjct: 1 MGRKVVVAVCCLNQWALDFDGNLSRIITSIQEAKVQGASYRTGPELEVTGYSCEDHFYEA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L + + VG P + N V G I+ +R K+ L + Sbjct: 61 DTLLHSWEVLAELLASPVCKNILVDVGMPVMHKSVTYNCRVAFFNGKILLIRPKLKLCDD 120 Query: 121 SEFHEKRTFISG------------------YSNDPIVFRDIRL-------GILICEDIWK 155 + E R F + +VF D L G ICE++W Sbjct: 121 GNYRESRWFTAWTKLYQTEDYILPEFIRELTGQKSVVFGDAVLETLDTTIGFEICEELWN 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDE 213 S+ L G EF+ + + S + K ++V ++ N G GQ Sbjct: 181 PSSTHISLGLDGVEFIVNGSGSYFELRKANVAVDLVVLATMKSGGCYLFSNLRGCDGQ-R 239 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE---------WHYDQQLSQWNYMSDDSAST 264 ++F+G S C Q + + FS + Y + N + S S Sbjct: 240 IMFNGGS-CIALNGQTIARTRQFSLEEVEVAVATVDLDDIRTYRNLVRSRNIAAAQSPSY 298 Query: 265 MYIPLQ-------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGL 299 IP+ EEE Y L DY++++ + L Sbjct: 299 RRIPVDFSLSESSCYAMRASSTPFKWQYHSPEEEIAYGPAGW-LWDYLRRSGQGGFFLPL 357 Query: 300 SGGIDS--------ALCAAIAV-----DALGKENVQTIMLPYKY---------------- 330 SGG+DS ++C + D+ ++V+ I+ Y Sbjct: 358 SGGVDSSSSAVLVYSMCRMVVTSVQNGDSHAIDDVRRIVGDPSYIPDDPRELCNRIFITC 417 Query: 331 ------TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS--------- 375 +S ++ + A + LG + L I +V+ ++ + P Sbjct: 418 YMGSANSSAETRQRAKDLSDQLGSYHLTLAIDAVVSAALNIFTVVTGLVPKFRVDGGSLR 477 Query: 376 -GIVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + +N+Q+R+R + L A ++L ++N E GY T Y S Sbjct: 478 ENLALQNVQARMRMVLSYLLAQLMLWARGRSGGLLVLGSANVDESLRGYLTKYDCSSADV 537 Query: 427 NPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 NP+ + K + + ++ RN + +TS LT PP+ E P E R QTD+E + Sbjct: 538 NPIGGISKGDLKRFLTYARNEYCLTSLDTILTA--PPTA-ELEPLQEGRLVQTDEEDM 592 >gi|331266383|ref|YP_004326013.1| carbon-nitrogen hydrolase family protein [Streptococcus oralis Uo5] gi|326683055|emb|CBZ00672.1| carbon-nitrogen hydrolase family protein [Streptococcus oralis Uo5] Length = 291 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVAAIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFERPYFCQERQYDYY 59 Query: 61 SFIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ ++AI KS + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVEENTAIQYFKSIAKELEVVLPISFYEKDGNVLYNSIAVIDADGEVVGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVSPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|237807252|ref|YP_002891692.1| N-carbamoylputrescine amidase [Tolumonas auensis DSM 9187] gi|237499513|gb|ACQ92106.1| N-carbamoylputrescine amidase [Tolumonas auensis DSM 9187] Length = 294 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 24/241 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVFKKSFIQACSSAIDT 72 DI GN+A+A + EA +G +IL ELF + Y PE ++ + S I Sbjct: 16 DIDGNVARAEKLVREAAAKGAQIILIQELFQTPYFCIDQSPEHFDLAQTLEE--SPLIQH 73 Query: 73 LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFIS 131 + + + + F + NS+V++DA G ++ V K ++PN + EK+ F Sbjct: 74 FSALAKELDVVLPLSFFERAGNAHYNSLVMIDADGEVLDVYRKTHIPNGPAYQEKQFFTP 133 Query: 132 GYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKK 186 G IV+ + +G+ IC D W + L GA+ +F ++ + P Y + Sbjct: 134 G-DTGFIVWETKYANVGVGICWDQW-FPETARSLALLGADVIFFPTAIGSEPAYPEIDSQ 191 Query: 187 RH--EIVTGQISHVHLPIIYVNQVGGQD-------ELIFDGASFCFDGQQQLAFQMKHFS 237 H + G + +P+I N++G + E+ F G+SF D +L Q S Sbjct: 192 PHWTRVQQGHAAANIIPVIASNRIGTEKSKFVEGLEMTFYGSSFIADQTGELVAQADKTS 251 Query: 238 E 238 E Sbjct: 252 E 252 >gi|70729836|ref|YP_259575.1| NAD synthetase [Pseudomonas fluorescens Pf-5] gi|68344135|gb|AAY91741.1| NAD+ synthetase [Pseudomonas fluorescens Pf-5] Length = 279 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 34/227 (14%) Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS----ALC--AAIAVDALGKENVQTIM 325 E A+ V ++ ++++ +++G+SGG+DS LC A + A G+E M Sbjct: 24 EAAEIARRVAFIQQVLRESGCSTLVLGISGGVDSLTAGRLCQLAVEQMRAAGQEARFIAM 83 Query: 326 -LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF----LQEEP--SGIV 378 LPY+ + +S DA AC +G D + ++ + LM+Q LQ P + V Sbjct: 84 RLPYRQQADES--DAQACLDFIG--PDAVSTCNIADSVEGLMNQVRIDGLQPSPALTDFV 139 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 N+++R R A++N S +++ T + +E +G+ T YGD + PL L KTQV Sbjct: 140 KGNVKARARMLAQYAVANFSNGLVVGTDHGAEALMGFFTKYGDGACDLAPLSGLTKTQVR 199 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 LA + P ++ K+P+A EL P + D+ + Sbjct: 200 LLAEALGA--------------PGHLVYKAPTADLEELAPGKLDETA 232 >gi|152996851|ref|YP_001341686.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Marinomonas sp. MWYL1] gi|150837775|gb|ABR71751.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Marinomonas sp. MWYL1] Length = 292 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 24/241 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+A Q+ + D N+ A EA ++IL ELF+ Y D K + Sbjct: 1 MSNVKVACVQM-AISTDFQANLDNAVAQVREAAANQANIILLQELFMGPYFCIDQ--KPA 57 Query: 62 FIQACSS-----AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + AI T+ + + G + + F +D NS+V++DA G ++ + K Sbjct: 58 YFDWAQPVNDCLAIQTMSALAKELGVVLPISFFERDGNVFYNSLVMIDANGEVMDLYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLF 172 ++P+ + EK F G N + D R+G IC D W + + L +GAE +F Sbjct: 118 HIPDGPGYQEKYYFTPG--NTGVKVWDTQFGRIGCGICWDQWF-PELARELALKGAELIF 174 Query: 173 ---SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG---GQDELI-FDGASFCF 223 ++ + P Y K H + G + +P+I N+VG G++ I F G+SF Sbjct: 175 YPTAIGSEPPYPEWDSKDHWQRTMQGHSAANMVPVIAANRVGREEGENSFIQFYGSSFMT 234 Query: 224 D 224 D Sbjct: 235 D 235 >gi|195392530|ref|XP_002054910.1| GJ19077 [Drosophila virilis] gi|194149420|gb|EDW65111.1| GJ19077 [Drosophila virilis] Length = 782 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 134/608 (22%), Positives = 225/608 (37%), Gaps = 141/608 (23%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A+ LN D GN+A+ ++ EA G EL + GY ED F++ Sbjct: 1 MGRKITVAVTTLNQWALDFEGNMARILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + + ++ + S + + VG P Q N V ++ +R K+ + Sbjct: 60 TDTFLHSWETLVEIMMSPICENML-VDVGMPVMHQNVAYNCRVAFFNRQLLLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD +G ICE++ Sbjct: 119 DDGNYRESRWFTAWTKSLRTEEYLLPRLITKHTGQETVPFGDAVIATRDTCIGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH---EIVTGQISHVHLPIIYVNQVGG 210 W + KH++ + +N S Y +L+K H +++ ++ N G Sbjct: 179 WNVRS--KHIEMSLSGVELIVNGSGSYM-ELRKAHITNDLICNASFKAGGAYLFSNLRGC 235 Query: 211 QDELI-FDGAS-FCFDGQ-----QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAS 263 + + F+G S +G +Q A Q E ++S + S + + Sbjct: 236 DGQRVYFNGCSAIALNGDLLARGKQFALQDVEVILATIDLEEIRAYRVSLRSRCSAAAGA 295 Query: 264 TMY--------------------IPLQ-------EEEADYNACVLSLRDYVQKNNFHKVI 296 Y PLQ EE A AC L DY++++ Sbjct: 296 VTYPRIRCDFEMSTHSDIFKISTPPLQLTNHTPEEEIALGPACW--LWDYLRRSGQGGFF 353 Query: 297 IGLSGGIDSALCAAIAV-------------DALGKENVQTIMLPYKYT------------ 331 + LSGG+DS+ A I DA +++ I+ YT Sbjct: 354 LPLSGGVDSSSSATIVYSMCQQIVHAVELGDAQVLYDIRKILADTDYTPINAAALCNRLL 413 Query: 332 ----------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP------- 374 S ++ AA A LG + + I VN S+ + P Sbjct: 414 VTCFMGSVNSSKETRCRAAQLASQLGSYHIEISIDLAVNALLSIFNAVTGLTPVFRTQGG 473 Query: 375 ---SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMS 423 + +NIQSRIR +++ + N +L L +SN E GY T Y S Sbjct: 474 CARQNLALQNIQSRIRMVLAYIFAQLMLWVRNRPGGLLVLGSSNVDESLRGYLTKYDCSS 533 Query: 424 GGFNPLKDLYKTQVFQ-LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------- 475 NP+ + KT + + LA R + P+ E SI++ P+AEL P Sbjct: 534 ADINPIGGISKTDLRRFLAYAREKFNL-----PVLE----SIIDAPPTAELEPLLANGEL 584 Query: 476 HQTDQESL 483 QTD+E + Sbjct: 585 LQTDEEDM 592 >gi|15642957|ref|NP_227998.1| hypothetical protein TM0183 [Thermotoga maritima MSB8] gi|4980679|gb|AAD35276.1|AE001703_5 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 267 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 4/149 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A Q+ P +GD GN+ + + E A +G ++++F EL ISGY ++ + K+ + Sbjct: 1 MRVAAVQMLPAIGDFEGNLERIEQFIEMAVSEGAEVVVFPELTISGYTWDEAILKRGALF 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A L + +G I VG PR + NS+VI + DK +L Sbjct: 61 FSEVAKKKLLKLSREGQILIAVGTPRVVLGKLRNSLVIFKKKKELLFYDKTHLFR----G 116 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDI 153 EK F G +R + G LIC +I Sbjct: 117 EKNVFEPGEYFLVFSYRGVVFGTLICYEI 145 >gi|167031426|ref|YP_001666657.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida GB-1] gi|166857914|gb|ABY96321.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida GB-1] Length = 264 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 32/259 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKK 60 ++IA+ Q P D+ GN+ + R + A +G L++ E+F++GY + + + Sbjct: 1 MRIALFQGAPKPLDVPGNLQRLRHQAQLAAERGAQLLVCPEMFLTGYNIGLAQVERLAEA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 A + ++ ++ IV G+P R D + NSV ++DA +L N Sbjct: 61 DDGPAAMAVVEIAQAQR----IAIVYGYPERGDDGAIYNSVQLIDA-------HGRSLSN 109 Query: 120 YSEFH-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF- 172 Y + H ++ F G P+V F ++G+LIC DI N + L GAE + Sbjct: 110 YRKTHLFGDLDRSMFSPGADLSPVVEFDGWKVGLLICYDIEFPEN-ARRLALDGAELILV 168 Query: 173 -SLNASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + N +PY + ++ R Q ++Y N G +DE+ + G S G Sbjct: 169 PTANMTPYDFTCQVTVRARAQENQCY-----LVYANYCGAEDEIHYCGQSSLI-GPDGSV 222 Query: 231 FQMKHFSEQNFMTEWHYDQ 249 M E + E +DQ Sbjct: 223 LAMAGQDECQLLAELEHDQ 241 >gi|148269876|ref|YP_001244336.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermotoga petrophila RKU-1] gi|147735420|gb|ABQ46760.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermotoga petrophila RKU-1] Length = 267 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 4/149 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A Q+ P +GD GN+ + + E A +G ++++F EL ISGY ++ + K+ + Sbjct: 1 MRVAAVQMLPAIGDFEGNLERIEQFIEMAVSEGAEVVVFPELTISGYTWDEAILKRGALF 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A L + +G I VG PR + NS+VI + DK +L Sbjct: 61 FSEVAKKKLLKLSREGQILIAVGTPRIVLGKLRNSLVIFKKKKELLFYDKTHLFR----G 116 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDI 153 EK F G +R + G LIC +I Sbjct: 117 EKNVFEPGEYFLVFSYRGVVFGTLICYEI 145 >gi|149409554|ref|XP_001506088.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 707 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 136/608 (22%), Positives = 217/608 (35%), Gaps = 142/608 (23%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A R+G L EL I GY D F+ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLERILKSIEIAKRKGAKYRLGPELEICGYGCSDHYFES 60 Query: 61 SF----IQACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 Q + +D+ T D I+ VG P + N VI ++ +R K Sbjct: 61 DTNLHSFQVLAKLLDS--PVTQD----IICDVGMPVMHRNVRYNCRVIFLNRKVLLIRPK 114 Query: 115 INLPNYSEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILI 149 + L N + E R F ++ PI +D +G + Sbjct: 115 MALANEGNYREMRWFTPWQRTRTIEEYFLPRMIQELTKQETVPIGDAVLATQDTCIGSEV 174 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 CE++W + + G E + + S + K R ++V S + NQ G Sbjct: 175 CEELWTPYSPHIEMGLDGVEIFTNASGSHHTLRKAYTRVDLVNMATSKNGGIYVLANQKG 234 Query: 210 GQ-DELIFDGASFCFDGQQQLAFQMKHFS--EQNFMTEW-------HYDQQLSQWNYMS- 258 D L +DG + + Q FS + +T Y ++S M+ Sbjct: 235 CDGDRLYYDGCAM-ISVNGAIVAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRGLMAS 293 Query: 259 -----------------DDSASTMYIPLQ------EEEADYN-ACVLSLRDYVQKNNFHK 294 DD A + P+Q EEE AC L DY++++ Sbjct: 294 RANPYPRVKVDFALSCHDDDADAVSEPIQWQYHSPEEEISLGPACWL--WDYLRRSQQAG 351 Query: 295 VIIGLSGGIDSALCAAIAV---------------------------DALGKENVQ----- 322 + LSGG+DS+ A I DA E+ + Sbjct: 352 FFLPLSGGMDSSSSACIVYSMCHQVCLAVKNGNQQVLADVRKIVYNDAYTPEDPRELCGR 411 Query: 323 ---TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS-------QFLQE 372 T + + +S + A AK +G + L I V + S QF Sbjct: 412 IFTTCYMASENSSEATRNRAKELAKQIGSYHINLNIDGAVKAILGIFSMVTGRTPQFRTH 471 Query: 373 EPSG---IVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGD 421 SG + +N+Q+R+R + LS S+ +++ ++N E GY T Y Sbjct: 472 GGSGRENLALQNVQARVRMVLAYLFAQLSLWSRGIQGGLLVIGSANVDECLQGYLTKYDC 531 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 S NP+ + KT + + H + L SIL+ P+AEL P Sbjct: 532 SSADINPIGGISKTDLKSFLQYCIEHFQLAAL--------ISILKAPPTAELEPLADGKM 583 Query: 476 HQTDQESL 483 QTD+E + Sbjct: 584 TQTDEEDM 591 >gi|306829509|ref|ZP_07462699.1| N-carbamoylputrescine amidase [Streptococcus mitis ATCC 6249] gi|304428595|gb|EFM31685.1| N-carbamoylputrescine amidase [Streptococcus mitis ATCC 6249] Length = 291 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A +QG +IL ELF Y ++ + Sbjct: 1 MRNVRVAAIQMQ-CAKDVATNIQTAERLVRQAAKQGAQIILLPELFERPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K+ + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVTENTAIQHFKAIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|156362593|ref|XP_001625860.1| predicted protein [Nematostella vectensis] gi|156212713|gb|EDO33760.1| predicted protein [Nematostella vectensis] Length = 867 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 131/600 (21%), Positives = 215/600 (35%), Gaps = 125/600 (20%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A+ +N D GN+ + ++ + A +G L EL I GY D F+ Sbjct: 1 MGRKVTLAVCTINQWALDFDGNLKRILQSIQLAKAKGASYRLGPELEICGYGCNDHFFEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I + L + VG P + N VI G I+ +R KI L N Sbjct: 61 DTILHSFQVLAFLLNSPVTRDIICDVGMPILHKNVRYNCRVIFLNGKILLIRPKIQLCNT 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 + E R F I+G S P + D +G +CE+++ Sbjct: 121 GNYREMRWFTPWRKMKQTEEFFLPRMISDITGQSTVPFGDGVVSTSDTCIGSEVCEELFS 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 + + G E + + S + KL KR +V +Y N G E + Sbjct: 181 LDSTHIPMALDGVEIFTNGSGSHHELRKLDKRVNLVISATEKAGGVYMYSNLRGCDGERV 240 Query: 216 -FDGASF-CFDGQ-----QQLAFQ-------------MKHFSEQNFMTEWHYDQQLSQWN 255 +DG SF +G+ Q A Q + + N Q + + Sbjct: 241 YYDGCSFIAVNGKVVAQGAQFALQDVEVVTATVDLEDVHSYRGANMTFGAAAIHQPTSYP 300 Query: 256 YMSDDSAST----MYIPLQ----------EEEADYN-ACVLSLRDYVQKNNFHKVIIGLS 300 + D A T + +PL EEE AC L DY++++ + LS Sbjct: 301 RVKVDYALTHDDDLVVPLSDAIRVHYHTPEEEISLGPACWLW--DYLRRSGQAGFFLPLS 358 Query: 301 GGIDSALCAAIAV-------------DALGKENVQTIMLPYKY--TSPQSLED------- 338 GGIDS+ A I D E+V+ ++ +Y T P+ L + Sbjct: 359 GGIDSSSTACIVASMCHLVCQSVRGGDTQVLEDVRRVVRDSEYIPTDPRELANRIFVTCY 418 Query: 339 -------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS---------- 375 AA A +G + + I V+ ++ + + P Sbjct: 419 MGTENSSEETRKRAANLADEMGSYHLGITIDAAVSAVLTIFTAMTSKVPKFKVHGGSHTE 478 Query: 376 GIVAENIQSRIR--------GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + +N+Q+R+R IL A ++L +SN E GY T Y S N Sbjct: 479 NLALQNVQARLRMIFAYLFAQLILWARGMPGGLLVLGSSNVDEGLRGYLTKYDCSSADIN 538 Query: 428 PLKDLYKTQ----VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 P+ + KT +F N + + LG PP+ E P ++ + Q D++ + Sbjct: 539 PIGGISKTDLRAFIFHCVEKYNFSSLITILGA-----PPTA-ELEPLSDGQIQQKDEDDM 592 >gi|257457865|ref|ZP_05623024.1| glutamine-dependent NAD+ synthetase [Treponema vincentii ATCC 35580] gi|257444578|gb|EEV19662.1| glutamine-dependent NAD+ synthetase [Treponema vincentii ATCC 35580] Length = 675 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 43/285 (15%) Query: 294 KVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K +IG+SGG+DS L +AV A ++V I +P T+ ++ +A A+ LGC Sbjct: 372 KTVIGISGGLDSTLALLVAVLAARILRQNTDSVTAITMPGFGTTDRTKSNALKLAELLGC 431 Query: 349 KYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 +PI ++ HF + + V EN Q+R R ILM +N A+L+ T + Sbjct: 432 SVLTVPIEKAMLQHFEDIGHPV---DLCNTVYENAQARERTQILMDKANQLGALLVGTGD 488 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT---------E 458 SE ++G+ T GD +N + KT + + I + P Sbjct: 489 LSESALGWETYNGDHMSMYNVNAGIPKTMLRHCIRY-----IAAYPAPFLPDIKKHTDFR 543 Query: 459 VIPPSILEKSPSAELRPHQTD------QESLPPYPILDDII----------KRIVENEES 502 I IL S EL P Q ++ L PY + D + +I+ E Sbjct: 544 AIIEDILNTPISPELLPAQKQVITQKTEDILGPYELHDFFLYYLLHTDFSPAKILLLAEH 603 Query: 503 FINNDQEYNDETV----RYVEHLLYGSEYKRRQAPVGTKITAKSF 543 + +Q YN + + R L+ ++KR AP G ++ SF Sbjct: 604 CFSTEQRYNRQQILGCMRIFYRRLFSQQFKRSCAPDGVQVGFGSF 648 >gi|313112097|ref|ZP_07797880.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa 39016] gi|310884382|gb|EFQ42976.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa 39016] Length = 292 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/288 (22%), Positives = 129/288 (44%), Gaps = 22/288 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDL 56 M + + +A Q+ D NIA+A + +A +G +IL ELF + Y P D Sbjct: 1 MTRNVTVAATQM-ACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + + ++ ++AI ++ + + + F + NS+ ++DA G + V K Sbjct: 60 LQLATTVEE-NAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKS 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ +HEK F G + + R R+G+ IC D W + + + GAE LF Sbjct: 119 HIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPES-ARSMALLGAELLFYP 177 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDG 225 ++ + P+ + + H + G +P++ N++G +++ + F G+SF D Sbjct: 178 TAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADP 237 Query: 226 QQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSDDSASTMYIPLQ 270 + ++ H E + + D + S W D + +Y PL+ Sbjct: 238 FGEKVEELNHTEEGILVHTFDLDALERTRSAWGVFRDRRPN-LYGPLK 284 >gi|307706574|ref|ZP_07643381.1| N-carbamoylputrescine amidase [Streptococcus mitis SK321] gi|307618029|gb|EFN97189.1| N-carbamoylputrescine amidase [Streptococcus mitis SK321] Length = 291 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/284 (24%), Positives = 119/284 (41%), Gaps = 30/284 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVAAIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFERPYFCQERQY--D 57 Query: 62 FIQACSS-----AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + Q S AI K+ + + + F +D + NS+ ++DA G ++ V K Sbjct: 58 YYQHAQSVTDNTAIQHFKTIAKELKVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ + EK F G + + R ++GI IC D W + L GAE LF Sbjct: 118 HIPDDHYYQEKFYFTPGNTGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYP 176 Query: 173 -SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDG 218 ++ + P + + G + +P+I N+ GGQ L F G Sbjct: 177 TAIGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYG 236 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ---WNYMSD 259 +SF D + Q + +E + + D+ S+ W D Sbjct: 237 SSFMTDETGAILEQAERQAEAVLLATYDLDKGASERLNWGLFRD 280 >gi|25012229|gb|AAN71229.1| LD11409p [Drosophila melanogaster] Length = 787 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 128/600 (21%), Positives = 223/600 (37%), Gaps = 136/600 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN+ + ++ EA G EL + GY ED F++ Sbjct: 1 MGRKVTVAVSTLNQWALDFEGNMVRILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + ++ + S + + VG P + N V I+ +R K+ + Sbjct: 60 PDTFLHSWEVLLEVMMSPMCENML-VDVGMPVMHRNVAYNCRVAFFNRQILLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD LG ICE++ Sbjct: 119 DDGNYRESRWFTAWTKALQTEEYVLPRMIAQHTGQQTVPFGDAVIATRDTCLGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL----PIIYVNQVG 209 W + KH++ A +N+S Y +L+K H I + I + ++ N G Sbjct: 179 WNVRS--KHIEMSLAGVELIVNSSGSYM-ELRKAH-ITSDLIRNASFKAGGAYLFSNLRG 234 Query: 210 GQDELI-FDGAS-FCFDGQ-----QQLAFQMKHFSEQNFMTE------------------ 244 + + F+G S +G+ QQ A Q + E Sbjct: 235 CDGQRVYFNGCSVIALNGEILARSQQFALQDVEVTLATIDLEEIRAYRVSLRSRCTAAAS 294 Query: 245 ------WHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKNNFHKV 295 H D ++S + + S + P+ +EE A AC L DY++++ Sbjct: 295 AAEYPRIHCDFEMSTHSDIFKTSTPPLNWPMHTPEEEIALGPACW--LWDYLRRSGQGGF 352 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTI------------------------------- 324 + LSGG+DS+ A I V ++ ++ VQ + Sbjct: 353 FLPLSGGVDSSSSATI-VHSMCRQIVQAVQQGDAQVLHDIRQLLADSDYTPDNAAGLCNR 411 Query: 325 MLPYKY-----TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----- 374 +L Y +S ++ AA A LG + + I VN S+ + P Sbjct: 412 LLVTCYMGSVNSSKETRRRAAQLANQLGSYHIEISIDSAVNALLSIFNAVTGLTPRFRTQ 471 Query: 375 -----SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGD 421 + +N+QSRIR + + + N +L L ++N E GY T Y Sbjct: 472 GGCARQNLALQNMQSRIRMVLAYIFAQLTLWVRNRPGGLLVLGSANVDESLRGYLTKYDC 531 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 S NP+ + K + + +T + SI++ P+AEL P Q + E Sbjct: 532 SSADINPIGGISKMDLRRF--------LTYAKDKFNLPVLESIIDAPPTAELEPLQENGE 583 >gi|24641841|ref|NP_572913.1| CG9940, isoform A [Drosophila melanogaster] gi|24641843|ref|NP_727727.1| CG9940, isoform B [Drosophila melanogaster] gi|8928236|sp|Q9VYA0|NADE1_DROME RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|7292912|gb|AAF48303.1| CG9940, isoform A [Drosophila melanogaster] gi|22832213|gb|AAN09333.1| CG9940, isoform B [Drosophila melanogaster] gi|241669010|gb|ACS68163.1| FI04036p [Drosophila melanogaster] Length = 787 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 128/600 (21%), Positives = 223/600 (37%), Gaps = 136/600 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN+ + ++ EA G EL + GY ED F++ Sbjct: 1 MGRKVTVAVSTLNQWALDFEGNMVRILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + ++ + S + + VG P + N V I+ +R K+ + Sbjct: 60 PDTFLHSWEVLLEVMMSPMCENML-VDVGMPVMHRNVAYNCRVAFFNRQILLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I RD LG ICE++ Sbjct: 119 DDGNYRESRWFTAWTKALQTEEYVLPRMIAQHTGQQTVPFGDAVIATRDTCLGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL----PIIYVNQVG 209 W + KH++ A +N+S Y +L+K H I + I + ++ N G Sbjct: 179 WNVRS--KHIEMSLAGVELIVNSSGSYM-ELRKAH-ITSDLIRNASFKAGGAYLFSNLRG 234 Query: 210 GQDELI-FDGAS-FCFDGQ-----QQLAFQMKHFSEQNFMTE------------------ 244 + + F+G S +G+ QQ A Q + E Sbjct: 235 CDGQRVYFNGCSAIALNGEILARSQQFALQDVEVTLATIDLEEIRAYRVSLRSRCTAAAS 294 Query: 245 ------WHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKNNFHKV 295 H D ++S + + S + P+ +EE A AC L DY++++ Sbjct: 295 AAEYPRIHCDFEMSTHSDIFKTSTPPLNWPMHTPEEEIALGPACW--LWDYLRRSGQGGF 352 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTI------------------------------- 324 + LSGG+DS+ A I V ++ ++ VQ + Sbjct: 353 FLPLSGGVDSSSSATI-VHSMCRQIVQAVQQGDAQVLHDIRQLLADSDYTPDNAAGLCNR 411 Query: 325 MLPYKY-----TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----- 374 +L Y +S ++ AA A LG + + I VN S+ + P Sbjct: 412 LLVTCYMGSVNSSKETRRRAAQLANQLGSYHIEISIDSAVNALLSIFNAVTGLTPRFRTQ 471 Query: 375 -----SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGD 421 + +N+QSRIR + + + N +L L ++N E GY T Y Sbjct: 472 GGCARQNLALQNMQSRIRMVLAYIFAQLTLWVRNRPGGLLVLGSANVDESLRGYLTKYDC 531 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 S NP+ + K + + +T + SI++ P+AEL P Q + E Sbjct: 532 SSADINPIGGISKMDLRRF--------LTYAKDKFNLPVLESIIDAPPTAELEPLQENGE 583 >gi|255535922|ref|YP_003096293.1| NAD synthetase [Flavobacteriaceae bacterium 3519-10] gi|255342118|gb|ACU08231.1| NAD synthetase [Flavobacteriaceae bacterium 3519-10] Length = 262 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 26/232 (11%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V L+DY K N +IG+SGG+DS + + + A+ V I +P + Q + A Sbjct: 11 VTWLKDYATKANVKGYVIGISGGVDSGVVSTLC--AMTGLKVLAIEMPIRQKEDQ-INRA 67 Query: 340 AACAKALGCKYDVLPIH--DLVNHFFSLMSQFLQEE---PSGIVA-ENIQSRIRGNILMA 393 K L K+ + DL F +L F +E P +A N ++R+R L Sbjct: 68 QEHIKFLESKFPNVEGQTVDLNEPFEALFRTFEVDEAHFPDQKLAFANTRARLRMLTLYY 127 Query: 394 LSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 + ++ T NK E +G+ T YGD +P+ DLYKT+V++LA + Sbjct: 128 YGQINGLLVCGTGNKVEDFGIGFYTKYGDGGVDVSPIADLYKTEVYELARSLD------- 180 Query: 453 LGPLTEVIPPSILEKSPSAEL-RPHQTDQESL-PPYPILDDIIKRIVENEES 502 +P SI P+ L +TD++ + YP L+ I K ES Sbjct: 181 -------LPESIKNAIPTDGLWDAERTDEQQIGATYPELEKIQKEWGNKTES 225 >gi|257483076|ref|ZP_05637117.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011690|gb|EGH91746.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 264 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q +P+ D++GN+ + + + A QG L++ E+F++GY + Sbjct: 1 MRIALYQCSPLPLDVSGNLTRLEKQAQAAAEQGAQLLICPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + V N+V ++D+G L NY + Sbjct: 61 QDGPAASRIAAIAQASGIAILYGYPERGPDQQVYNAVQLIDSGG-------TRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFAAGEDHYPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + ++ R H ++Y N G + E+ + G +S C DG + L Sbjct: 173 MLPYDFVCEVTVRARAFEN-----HCYVVYANYCGSEGEIRYCGLSSICAPDGSRPL 224 >gi|225011600|ref|ZP_03702038.1| NAD+ synthetase [Flavobacteria bacterium MS024-2A] gi|225004103|gb|EEG42075.1| NAD+ synthetase [Flavobacteria bacterium MS024-2A] Length = 270 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ--SLEDAA 340 L +Y+++ + ++G+SGGIDSA+ + + GK +V + +P K S Q +D Sbjct: 22 LTNYLEETGMNGFVVGVSGGIDSAVTSTLCAKT-GK-SVLCLEMPIKQESSQVNRAQDHI 79 Query: 341 ACAKA--LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 KA K LP+ + F ++ +E + N ++R+R L + Sbjct: 80 KWLKANFKNVKSFRLPLDSVFESFTEIIPTAEDKEAQFLSLANTRARLRMTSLYYFAALH 139 Query: 399 KAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 ++ T NK E VG+ T YGD +P+ DL KT+VF++A + Sbjct: 140 HCLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKTEVFEIAKY 185 >gi|322698301|gb|EFY90072.1| glutamine-dependent NAD(+) synthetase [Metarhizium acridum CQMa 102] Length = 614 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 128/594 (21%), Positives = 211/594 (35%), Gaps = 136/594 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A A L V D GN+A+ + + A QG L EL + GY D + Sbjct: 4 ITVAAATLTSVPLDFKGNLARILESIKLAKEQGAKLRTGPELEVPGYGCLDHHLEGDTFL 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++ I VG + + N V+L +I +R K++L N + Sbjct: 64 HSWEVVAQILNEPMIKDMLIDVGMGVRHRNVRYNCRVLLTYQHIYMIRPKMSLANDGLYR 123 Query: 125 EKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWKNSNI 159 E R F I+G + PI D +G CE+++ SN Sbjct: 124 EARHFTAWSKPRTTETYYLEKVVRDITGQRSVPIGDVVLSTMDTSVGCETCEELFTPSNP 183 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDELIFD 217 ++ G E + + +AS KL R ++ + +Y N G G+ ++FD Sbjct: 184 STYMGLNGVEVILNSSASHAELRKLNTRLNLIQNCTRKLGGLYVYANATGVDGEARMMFD 243 Query: 218 GASFCF-DGQ---QQLAFQMKHFS------------------EQNFMTEWHYDQQLSQWN 255 G+S +G Q F +K +N D + + Sbjct: 244 GSSMILCNGAVLGQSPQFSLKEVEVLTATIDLETIRSHRSSISRNVQGAAQPDYPRVECD 303 Query: 256 YMSDDSASTMYI----------------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 A ++I P+QE Y A + L Y+ ++N I L Sbjct: 304 LYLSRPADEVFISDTLHLSREIQLNIPDPMQE---IYMAEAVFLWQYLTRSNLGGFFIAL 360 Query: 300 SGGIDSALCAAIAVDALGKENVQTI-------------MLPYKYTSPQSLED-------- 338 SGG+DSA ++ V + K +Q++ + K P++ +D Sbjct: 361 SGGLDSA-SVSLFVYGMAKVVLQSVKSGDERTLSELRRITGEKDLVPETPQDIVSRLLHT 419 Query: 339 ---------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-----SGIV 378 A A +G + + I + V+ +++ Q + EP G V Sbjct: 420 CYMGTVNSGEHTRSRAKRLAARIGAFHSDVNIDETVSAHEAVIKQAMNFEPKFQVEGGSV 479 Query: 379 AE-----NIQSRIRGNILMALSNHSKA-----------MLLTTSNKSEISVGYGTLYGDM 422 AE NIQ+R R + L+ S ++L++ N E GY T Y Sbjct: 480 AENLAKQNIQARNRMIVAYELAQLSTTARKLPRAGTSLLVLSSGNVDEALRGYLTKYDCS 539 Query: 423 SGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 SG PL + K+ +W R+ + I LE PSAEL P Sbjct: 540 SGDIAPLGSISKSDAKSFLAWCRDKWDMP---------IITEFLEARPSAELLP 584 >gi|83590913|ref|YP_430922.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Moorella thermoacetica ATCC 39073] gi|83573827|gb|ABC20379.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Moorella thermoacetica ATCC 39073] Length = 245 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 13/253 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ AQ+ + +A N A R EA +G++L++F E+ ++GY P L + F + Sbjct: 1 MRLGAAQMF-IADSMAVNEATILRLAGEAAGRGVELLVFPEMGLTGYNPAAL-GRPGFKE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNYSEF 123 A+ + D G G++VG E + NS V L G++ R KI L + Sbjct: 59 ELEGALARIARRAADLGVGLIVGRAEFAGERLFNSASVFLPDGSVHTYR-KIYLTD---- 113 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN- 182 E R F G + ++ + G++IC D + + + +GA LF L+A Y Sbjct: 114 AEARYFTPGTGHLVFNYKGSKFGVIICRD-QNYPELARQIAAEGARALFILSAHYYQPGE 172 Query: 183 ---KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 KL K + + H ++ N VG ++ G S D + L SE Sbjct: 173 ARWKLPKNRALPIARAVENHCYVLLANAVGSHIGMVSLGNSLIADPEGGLVVMADEASET 232 Query: 240 NFMTEWHYDQQLS 252 + D Q S Sbjct: 233 LLTCDLPGDSQCS 245 >gi|261749162|ref|YP_003256847.1| NH(3)-dependent NAD synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497254|gb|ACX83704.1| NH(3)-dependent NAD synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 267 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 15/176 (8%) Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 V L+ Y++K + +IG+SGGIDSA+ + + A+ K T+ +P +P L + Sbjct: 12 IVQWLKKYIKKTQSNGFVIGISGGIDSAVASMLV--AMTKYPTFTLEMPILEKNPNFLSE 69 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE--------NIQSRIRGNI 390 K L +H L SL + F+ I + N +SRIR Sbjct: 70 QHVNF----LKSRFLNVHHLKKDLSSLFTSFIHTMNDNITEKKNKPLALANAKSRIRMLT 125 Query: 391 LMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 L +N +++ T NK E VG+ T YGD +P+ DL K+++ LA N Sbjct: 126 LYYYANIENYLVVGTGNKVEDFGVGFFTKYGDGGVDIHPIADLTKSEIRFLAKELN 181 >gi|110638899|ref|YP_679108.1| carbon-nitrogen hydrolase [Cytophaga hutchinsonii ATCC 33406] gi|110281580|gb|ABG59766.1| carbon-nitrogen hydrolase [Cytophaga hutchinsonii ATCC 33406] Length = 290 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 125/299 (41%), Gaps = 35/299 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF 58 M KK+ + + QL+ ++ N K + EA +G +I ELF S Y ED Sbjct: 1 MNKKVNVGLVQLS-CSSNVKDNFEKNVQGIREAAAKGAQIICLQELFGSLYFCDVEDYDN 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 K A D ++ + G I+ + EG+ N+ ++DA G+ + K++ Sbjct: 60 FKLAESIPGPATDAFQALAKELGVVIIASLFEKRAEGLYHNTTAVIDADGSYLGKYRKMH 119 Query: 117 LPNYSEFHEKRTFISG---YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +P+ ++EK F G Y F + G+LIC D W + GA+ LF Sbjct: 120 IPDDPGYYEKFYFTPGDLGYKVFKTKFATV--GVLICWDQWY-PEAARITSLMGADILFY 176 Query: 174 LNASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 A + ++ +++ H + G P++ VN+ G + + F G Sbjct: 177 PTAIGWADHQTEEVNTDQYNAWQTIQRSHSVANG------TPVVSVNRTGVEAGMQFWGG 230 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSDDSASTMYIPLQEEEAD 275 SF + Q ++ +Q H +E+ + E Q + W ++ D + Y P+Q+ D Sbjct: 231 SFVSNAQGRVLYQAPHLTEEIHVQEIDMSQTDYYRTHWPFLRDRRIDS-YAPIQKRFID 288 >gi|116669060|ref|YP_829993.1| NAD synthetase [Arthrobacter sp. FB24] gi|116609169|gb|ABK01893.1| NH(3)-dependent NAD(+) synthetase [Arthrobacter sp. FB24] Length = 273 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 28/227 (12%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE----NVQTIMLPYKYTS 332 V L++Y++ + ++G+SGG+DS+L A +AV+ L E N + LPY Sbjct: 28 VTFLKEYLKATHTKGFVLGISGGLDSSLAGRLAQLAVEELAAEGTEANFVAVRLPYGVQH 87 Query: 333 PQSLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 + +DA A + K + I V+ F + + S N ++R R Sbjct: 88 DE--DDAQAALDFIQAKTEWTFNISAAVDGFEEEFEKTVGNGISDFHKGNTKARTRMIAQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 AL+ +++ T + +E G+ T YGD PL L K R + + + Sbjct: 146 YALAGEHNYLVIGTDHGAESVTGFFTKYGDGGADILPLFGLNK---------RQNRALLA 196 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P I EK P+A+L +P +TD+E L Y +DD ++ Sbjct: 197 ELGA-----PARIWEKVPTADLLDGKPGRTDEEELGLSYDQIDDYLE 238 >gi|190348394|gb|EDK40840.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 714 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 128/598 (21%), Positives = 208/598 (34%), Gaps = 143/598 (23%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ +EA + G L + EL I GY D + Sbjct: 5 VTLATCNLNQWALDFEGNRDRILQSIKEAKKNGASLRVGPELEICGYGCLDHFLENDLYD 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + G + +G P + N ++ G I+ +R K+ L N + Sbjct: 65 HCWDMYLQILGNPDTHGLLLDIGMPVMHRSIKYNCRLLSHDGKILLIRPKLYLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSNDPIVFRDIRLGIL-------ICEDIWKNS 157 E R F ++G S+ ++F D + L CE+++ Sbjct: 125 EMRYFTPWNRPQYYEDFKLPKNARKVTGQSS--VLFGDCVVDTLETTVAAETCEELFTPQ 182 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIF 216 + + G E + + S + KL R +++T +Y NQ G D L + Sbjct: 183 SPHISMALDGVEIYTNSSGSHHELRKLDTRLQLITEATKKCGGVYLYANQKGCDGDRLYY 242 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF---------------------------MTEWHYDQ 249 DG + C ++ Q FS + T +H+ Sbjct: 243 DGCA-CIVVNGEMVAQASQFSLSDVEVVTATIDLDDVRSFRNQKSAAMQAVASTSYHHID 301 Query: 250 ---QLSQWNYMSDDSASTMYIPLQ-----EEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +LS + + A T IP++ EE A AC L DY+++ + LSG Sbjct: 302 TTIELSPSANVWNGIAPTSPIPVRIHSAAEEIALGPACW--LWDYLRRCRAAGFFLPLSG 359 Query: 302 GIDSALCAAI-------AVDALGKENVQTI-----------MLPYKYTSPQSLE------ 337 GIDS A I V A+ + Q I +P +PQ L Sbjct: 360 GIDSCATAVIVHSMCRLVVAAVENHDHQVISDVKSLVHDDSFVP---KTPQELADKLFHT 416 Query: 338 ----------DAAACAKALGCKYD--------------VLPIHDLVNHFFSLMSQFLQEE 373 D + AK L K V+ + ++ + F + Sbjct: 417 AFLGTENSSGDTRSRAKELAAKIGSFHVDLNMDTAVSAVISVFEVATGRKPIFKVFGGSQ 476 Query: 374 PSGIVAENIQSRIRGNILMALS---------NHSKA---MLLTTSNKSEISVGYGTLYGD 421 + +NIQ+R+R M LS SK ++L ++N E GY T Y Sbjct: 477 TENLALQNIQARLR----MVLSYMFAQLLPWTRSKTGGLLVLGSANVDECLRGYLTKYDC 532 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 S NP+ + KT + + SW I L+ +P+AEL P D Sbjct: 533 SSADINPIGGVSKTDLKRFISWAEKE--------FDMPILKQFLDATPTAELEPITAD 582 >gi|238752320|ref|ZP_04613799.1| N-carbamoylputrescine amidase [Yersinia rohdei ATCC 43380] gi|238709481|gb|EEQ01720.1| N-carbamoylputrescine amidase [Yersinia rohdei ATCC 43380] Length = 294 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 16/243 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + K+ +A Q+ D+ NI A + A+ +G +IL ELF + Y PE Sbjct: 1 MTKVTVAATQMA-CSWDLPKNIENAEKLVRLAHAKGAQIILIQELFAAPYFCIDQSPEHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + S I + + + F + NS+V++DA G ++ V K Sbjct: 60 ALAQELDN--SPLIQHFSKLAAELEVVLPLSFFEKANNAYYNSLVMIDADGTVMDVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++PN + EK+ FI G + + R ++G+ IC D W + L GAE +F Sbjct: 118 HIPNGPAYQEKQFFIPGDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALLGAEIIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P Y + H + G + +P+I N++G + DG F G + Sbjct: 177 TAIGSEPAYPEIDSQPHWTRVQQGHAAANLVPVIASNRIGTEKSKYIDGLEMTFYGSSFI 236 Query: 230 AFQ 232 A Q Sbjct: 237 ADQ 239 >gi|170781931|ref|YP_001710263.1| NAD synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|169156499|emb|CAQ01649.1| NH(3)-dependent NAD(+)synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 273 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 40/260 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENV----QTIMLPYKYTSPQS 335 L+ Y++ ++G+SGG DS+L A +AV+ L E + + LPY + + Sbjct: 31 LKAYLRSTGAEGFVLGVSGGQDSSLAGRLAQLAVEELAAEGLLAEFVAVRLPYGVQADE- 89 Query: 336 LEDAAACAKALGCKYDVL-PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 EDA + K V+ I V+ F + + + N+++R R AL Sbjct: 90 -EDAQLALSFIQPKSSVVFDIKRAVDGFQAEYADAAGHAMTDFTKGNVKARSRMIAQYAL 148 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + ++ +++ T + +E G+ T YGD PL L K R + LG Sbjct: 149 AGQARLLVIGTDHAAEAVTGFFTKYGDGGADVLPLTGLTK---------RQGRALLERLG 199 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 P + K+P+A+L P QTD+ +L Y +DD ++ ++ Sbjct: 200 A-----PERLYLKAPTADLLDETPGQTDEANLGLTYADIDDFLE------------GRDV 242 Query: 511 NDETVRYVEHLLYGSEYKRR 530 +DE +E +E+KRR Sbjct: 243 DDEVAEAIEARYASTEHKRR 262 >gi|238786369|ref|ZP_04630301.1| N-carbamoylputrescine amidase [Yersinia bercovieri ATCC 43970] gi|238712727|gb|EEQ04807.1| N-carbamoylputrescine amidase [Yersinia bercovieri ATCC 43970] Length = 284 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 15/227 (6%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVFKKSFIQACSSAIDT 72 D+ NI A + +A+ +G +IL ELF + Y PE + S I Sbjct: 6 DLPKNIENAEKLVRQAHAKGAQIILIQELFAAPYFCIDQSPEHYALAQELDN--SPLIKH 63 Query: 73 LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFIS 131 + + + F + NS+V++DA G ++ V K ++PN + EK+ FI Sbjct: 64 FSKLAAELQVVLPLSFFEKANNAYYNSLVMIDADGAVLDVYRKTHIPNGPAYQEKQFFIP 123 Query: 132 GYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKR 187 G + + R ++G+ IC D W + L GAE +F ++ + P Y + Sbjct: 124 GDTGFKVWQTRYAKVGVGICWDQW-FPETARSLALLGAEIIFYPTAIGSEPAYPEIDSQP 182 Query: 188 H--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 H + G + +P+I N++G + DG F G +A Q Sbjct: 183 HWTRVQQGHAAANLVPVIASNRIGTEKSKFIDGLEMTFYGSSFIADQ 229 >gi|295839969|ref|ZP_06826902.1| delta-aminovaleramide aminohydrolase [Streptomyces sp. SPB74] gi|197696804|gb|EDY43737.1| delta-aminovaleramide aminohydrolase [Streptomyces sp. SPB74] Length = 275 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 31/237 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ + GD+ N+ A G L++ ELF+SGY PE K Sbjct: 1 MRLALAQSSGTPGDVRANLDALDALVARAAASGAHLLITPELFLSGYAPEHRSPKAGIAS 60 Query: 65 A-CSSAIDTLKSDTHDG--------------GAGIVVGFPRQDQEGVLNSVVILDA-GNI 108 + C S L + + G ++ G+P +D NS ++L A G Sbjct: 61 SRCESDEPPLAALAQERDEAAAALGALARRHGLALLAGYPERDGADTYNSALLLGADGAP 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIV---FRDIRLGILICEDIWKNSNICKHLKK 165 +A K +L Y + E+ F +G + +V R +RLG+LIC D+ N+ H + Sbjct: 121 LAAYRKTHL--YGPY-ERGVFTAG--DRAVVQAELRGVRLGVLICYDVEFPENVRAH-AE 174 Query: 166 QGAEFLFSLNA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 G E L A +PY +V + L + YVN+ G + F G S Sbjct: 175 AGTEVLLVPTALLAPYDFVA----RSLVPVRAFESQLYVAYVNRTGPEGGFDFVGLS 227 >gi|146280458|ref|YP_001170611.1| hydratase [Pseudomonas stutzeri A1501] gi|145568663|gb|ABP77769.1| probable hydratase [Pseudomonas stutzeri A1501] Length = 293 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 16/263 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M + + +A Q+ D NIA A R EA +G +IL ELF + Y P Sbjct: 1 MSRVVTVAATQM-ACSWDRQANIANADRLVREAAAKGAQIILIQELFETPYFCQKPNPQY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 + + + AI + + + + F NS+ I+DA G ++ V K + Sbjct: 60 LQLATPVEQNPAIQHFQKLAAELQVVLPISFFELAGRARFNSIAIIDADGKLLGVYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ +HEK F G + + R R+G+ IC D W + + GAE LF Sbjct: 120 IPDGPGYHEKYYFNPGDTGFKVWNTRYARIGVAICWDQW-FPETARSMALMGAELLFYPT 178 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQ 226 ++ + P+ + + H + G +P+I N++G +++ + F G+SF D Sbjct: 179 AIGSEPHDASITSRDHWQRVQQGHAGANLMPLIASNRIGREEQDGYDITFYGSSFIADQF 238 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQ 249 +M SE + + DQ Sbjct: 239 GAKVEEMDETSEGVLVHSFDLDQ 261 >gi|237803309|ref|ZP_04590894.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025290|gb|EGI05346.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 266 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 24/229 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P+ DI+GN+ + + A QG +++ E+F++GY + Sbjct: 1 MRIALYQCPPLPLDISGNLNRLEQQAIAAASQGAQVLICPEMFLTGYNIGARAVGELAQP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A + + G I+ G+P R E N+V ++D+ + L NY + Sbjct: 61 SDGLAATRIAAIAQANGIAILYGYPERGANEQFYNAVQLIDS-------HGVRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFSAGDDHCPVVELNGWRLGLLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFC 222 +PY + + R H ++Y N G + E+ + G +S C Sbjct: 173 MAPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGEIRYCGLSSLC 216 >gi|168698868|ref|ZP_02731145.1| NAD synthetase [Gemmata obscuriglobus UQM 2246] Length = 467 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 55/310 (17%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALG--KENVQTIMLPYKYTSPQ 334 V +L + NF V IG+SGG+DS L + +D LG ++ V + +P T+P+ Sbjct: 143 VAALGRRLSHVNFPPVSIGVSGGLDSTLALLVVCKTMDELGVPRDRVHALTMPGFGTTPE 202 Query: 335 SLEDAAACAKALGCKYDVLPIH-----------------DLVNHFFSLMSQFLQEEP--- 374 + +A A AL + I L +S L+ P Sbjct: 203 TRANADGLAGALNITLREIDIRAMCLEQMRALGHAPFGIKLAGETVESLSDKLRRLPPHN 262 Query: 375 -SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 S + EN+Q+R+R ++LM + ++ T + SE+++G+ T D +NP + Sbjct: 263 RSDLTFENVQARVRTSLLM-----NAGFVIGTGDLSELALGWCTYNADHMSMYNPNVSIP 317 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQESLPPY 486 KT V L W + GP + + +I+ + EL P Q + ++ PY Sbjct: 318 KTLVKFLVQWAAENEFD---GPARDTL-LAIVNTAIRPELLPLDEGGAATQLTEATVGPY 373 Query: 487 PILDDIIKRIVE-----NEESFINNDQEYN-----DETVRYVEHLL---YGSEYKRRQAP 533 ++D + + + F+ +++ DE +++ L + S+YKR P Sbjct: 374 ELVDFFLYHFLRFGAEPRKILFLAGHAKFSKTYEPDEVRHWLKEFLRRFFASQYKRSCLP 433 Query: 534 VGTKITAKSF 543 G K+ + S Sbjct: 434 DGPKVGSVSL 443 >gi|332076203|gb|EGI86669.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae GA41301] Length = 291 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A +QG +IL ELF Y ++ + Sbjct: 1 MRNVRVATIQMQ-CAKDVATNIQTAERLVRQAAKQGAQIILLPELFEHPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVAENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWNTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|327478675|gb|AEA81985.1| hydratase [Pseudomonas stutzeri DSM 4166] Length = 293 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 16/263 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M + + +A Q+ D NIA A R EA +G +IL ELF + Y P Sbjct: 1 MSRVVTVAATQM-ACSWDRQANIANADRLVREAAAKGAQIILIQELFETPYFCQKPNPQY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 + + + AI + + + + F NS+ I+DA G ++ V K + Sbjct: 60 LQLATPVEQNPAIQHFQKLAAELQVVLPISFFELAGRARFNSIAIIDADGRLLGVYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ +HEK F G + + R R+G+ IC D W + + GAE LF Sbjct: 120 IPDGPGYHEKYYFNPGDTGFKVWNTRYARIGVAICWDQW-FPETARSMALMGAELLFYPT 178 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQ 226 ++ + P+ + + H + G +P+I N++G +++ + F G+SF D Sbjct: 179 AIGSEPHDASITSRDHWQRVQQGHAGANLMPLIASNRIGREEQDGYDITFYGSSFIADQF 238 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQ 249 +M SE + + DQ Sbjct: 239 GAKVEEMDETSEGVLVHSFDLDQ 261 >gi|302780044|ref|XP_002971797.1| hypothetical protein SELMODRAFT_95570 [Selaginella moellendorffii] gi|300160929|gb|EFJ27546.1| hypothetical protein SELMODRAFT_95570 [Selaginella moellendorffii] Length = 699 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 141/613 (23%), Positives = 227/613 (37%), Gaps = 153/613 (24%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED-LVFKK 60 ++ + +A++ LN N++ +++ A G + EL ++GY ED + ++ Sbjct: 1 MRLVNLAVSSLNQWAMSFDHNLSNIKQSIAVARESGAAFRVGPELELTGYGCEDHFLERE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVL-NSVVILDAGNIIAVRDKINL 117 + I A + L S DG IV +G P EGVL N V G I+ VR K + Sbjct: 61 TCITAWECLAEILSSGLTDG---IVCDIGLPVL-HEGVLYNCRVFCLDGEILLVRPKKFM 116 Query: 118 PNYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICED 152 N + E R F S + + + F+D L CE+ Sbjct: 117 ANDGNYRELRWFSSWKRHKVVTSLNLPECVQAIKSQRTVPFGDAYLSFQDTDLASECCEE 176 Query: 153 IWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEI-----VTGQISHVHLPIIYVNQ 207 ++ L G + + N S +H K+R + VT + V+L Y NQ Sbjct: 177 LFTPKQASSGLALHGVQIIS--NGSGSHHQLRKQRTRLRLMKNVTERCGGVYL---YANQ 231 Query: 208 VGGQ-DELIFDG-ASFCFDGQQQLAFQMKHFSEQ---------------NF-MTEWHYDQ 249 G L +DG AS +G ++ Q + FS NF ++ + + Sbjct: 232 QGCDGGRLYYDGCASVVMNG--EVILQGRQFSLHDVDVCTVCLDLDEVVNFRASKSSFRE 289 Query: 250 QLSQWNYMS--DDSAS------------------TMYIPLQEEEADYNACVLSLRDYVQK 289 Q S+ M+ + +AS T ++P ++E A AC L DY+++ Sbjct: 290 QASERRSMACVNVAASLCELSSSRSLRISRPLKATRFLP-EQEIALGPACWLW--DYLRR 346 Query: 290 NNFHKVIIGLSGGIDSALCAAIA-------------------VDALGKENVQ-------- 322 + ++ LSGG DS+ AAI DA N + Sbjct: 347 SGASGYLLPLSGGADSSAVAAIVGSMCQLVIKAIHENDKRVLTDARRIGNYKPGEEPADS 406 Query: 323 ---------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 T+ + + +S + A A+ +G + L I +VN SL Sbjct: 407 QEFASRIFYTVYMASQNSSTDTQSRAQQLAREIGSNHWNLKIDIVVNALISLFCGLTGRI 466 Query: 374 P-----SG-----IVAENIQSRIRGNI------LMALSNHSKAMLLT--TSNKSEISVGY 415 P SG + +N+Q+R+R I L+ K LL +SN E GY Sbjct: 467 PRYKVDSGTPVENLALQNLQARVRMVISYMLASLLPWVGRKKGFLLVLGSSNADESIRGY 526 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T Y S NP+ + K + W G L + + P+AEL P Sbjct: 527 MTKYDCSSADINPIGGISKRDLRAFLRW--------GAQKLGFPVLAQVEAAPPTAELEP 578 Query: 476 -----HQTDQESL 483 QTD+E + Sbjct: 579 SSDGYKQTDEEDM 591 >gi|300123831|emb|CBK25102.2| unnamed protein product [Blastocystis hominis] Length = 292 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 15/214 (7%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPED---LVFKKSFIQACSSAIDTLKSDTH 78 NIAK + EA +G +IL ELF Y +D F K+ S I + Sbjct: 20 NIAKGEKLIREAAAKGAQVILLQELFSDWYFCQDEKQSSFSKAEPAGTSKLISHFRKVAK 79 Query: 79 DGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDP 137 + + + F +D + NS+ I+DA G ++ V K ++P+ + EK F G + Sbjct: 80 ELQVVLPISFFERDNQAFYNSIAIIDADGEVLGVYRKSHIPDGPGYEEKFYFSPGDTGFK 139 Query: 138 IV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRH--EIV 191 + + +LG+ IC D W + + GAE L ++ + P H+ + H + Sbjct: 140 VWDTKYCKLGVAICWDQW-FPEAARIMALMGAEVLMYPTAIGSEPQDHSLVSSGHWRRTM 198 Query: 192 TGQISHVHLPIIYVNQVGGQ----DELIFDGASF 221 G + ++P++ N++G + ++F G SF Sbjct: 199 QGHSAANYVPVVASNRIGEEFGDNSSIMFYGTSF 232 >gi|169630500|ref|YP_001704149.1| NAD synthetase [Mycobacterium abscessus ATCC 19977] gi|238688910|sp|B1ME26|NADE_MYCA9 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|169242467|emb|CAM63495.1| NH(3)-dependent NAD(+) synthetase [Mycobacterium abscessus] Length = 273 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ----- 322 P + A+ + V L+DY++ ++ ++G+SGG DSAL + A + ++ Sbjct: 16 PTIDPAAEVSRRVGFLKDYLRASSTKGFVLGISGGQDSALAGRLCQLAAQESRLEGVAAE 75 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPY + + EDA + + + V+ I + + +++ L E P+ V Sbjct: 76 FIAVRLPYGVQADE--EDAQVALRFIDPDRTIVINIKETSDAATKAVAEALGETPTDFVR 133 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R + A + + +++ T + +E G+ T +GD PL L K Q Q Sbjct: 134 GNIKARERMVVQYAAAGQHRLLVVGTDHAAEAVTGFFTKFGDGGVDVTPLTGLTKRQGAQ 193 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 I S LG P SI K P+A+L RP D+ +L Y +DD ++ Sbjct: 194 ---------ILSHLGA-----PDSISHKVPTADLEDDRPALPDEVALGVTYAQIDDYLE 238 >gi|330874833|gb|EGH08982.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 271 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P+ DI+GN+A+ + A Q L++ E+F++GY + Sbjct: 1 MRIALYQCPPLPLDISGNLARLEQQAVSAAAQSAQLLICPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 SA + + G I+ G+P +D + + N+V ++D ++L NY + Sbjct: 61 HDGSAAMRIAAIAKANGIAILYGYPERDTDQQIYNAVQLID-------EHGVSLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFSAGADYFPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 +PY + ++ R H ++Y N G + E+ + G +S C DG + L Sbjct: 173 MAPYDFVCEVTVRARAFEN-----HCYVVYANYCGSEGEIRYCGLSSLCAPDGSRPL 224 >gi|330956949|gb|EGH57209.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 264 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 27/238 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P+ D+ GN+A+ + A QG +++ E+F++GY + Q Sbjct: 1 MRIALYQCPPLPLDVRGNLARLEQQAVSAAAQGAQVLICPEMFLTGYNIGAQAVSER-AQ 59 Query: 65 ACSSAIDT-LKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A + T + + G I+ G+P R + + N+V ++D+ L NY + Sbjct: 60 AQDGPVATHIAALAQANGIAILYGYPERGADQQIYNAVQLIDS-------QGTRLCNYRK 112 Query: 123 FH-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SL 174 H +K F +G + P+V +LG+LIC D+ N + L GAE + + Sbjct: 113 THLFADLDKSMFTAGDDHFPVVELNGWKLGLLICYDVEFPENT-RRLALAGAELILVPTA 171 Query: 175 NASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 N +PY + + R H ++Y N G + E+ + G +S C DG + L Sbjct: 172 NMAPYDFVCDVTVRARAFEN-----HCYLVYANYCGSEGEIRYCGLSSVCAPDGSRSL 224 >gi|148272623|ref|YP_001222184.1| NAD synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830553|emb|CAN01488.1| NH3-dependent NAD+ synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 273 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 40/260 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPYKYTSPQS 335 L+ Y++ ++G+SGG DS+L A +A++ L E + + LPY + + Sbjct: 31 LKAYLRSTGAEGFVLGVSGGQDSSLAGRLAQLAIEELASEGLLAEFVAVRLPYGVQADE- 89 Query: 336 LEDAAACAKALGCKYDVL-PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 EDA + K V+ I V+ F + + + N+++R R AL Sbjct: 90 -EDAQLALSFIQPKSSVIFDIKRAVDGFQAEYADAAGHAMTDFTKGNVKARSRMVAQYAL 148 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + ++ +++ T + +E G+ T YGD PL L K R + LG Sbjct: 149 AGQARLLVIGTDHAAEAVTGFFTKYGDGGADVLPLTGLSK---------RQGRALLEHLG 199 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 P + K+P+A+L P QTD+ +L Y +DD ++ ++ Sbjct: 200 A-----PERLYLKAPTADLLDDTPGQTDEANLGLTYADIDDFLE------------GRDV 242 Query: 511 NDETVRYVEHLLYGSEYKRR 530 +DE +E +E+KRR Sbjct: 243 DDEVAEAIEARYASTEHKRR 262 >gi|282897596|ref|ZP_06305596.1| NH(3)-dependent NAD(+) synthetase [Raphidiopsis brookii D9] gi|281197519|gb|EFA72415.1| NH(3)-dependent NAD(+) synthetase [Raphidiopsis brookii D9] Length = 102 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GD+ GN K ++AN + L+L EL + GYPP DL+ F++ Sbjct: 1 MKIAIAQLNPIIGDVKGNCQKILEIAQQAN--DVRLLLTPELSLCGYPPRDLLLNPGFVE 58 Query: 65 ACSSAIDTLKSD 76 A ++ L + Sbjct: 59 AMDMSLQELAQN 70 >gi|17538756|ref|NP_501866.1| hypothetical protein C24F3.4 [Caenorhabditis elegans] gi|3874484|emb|CAA18773.1| Hypothetical protein C24F3.4a [Caenorhabditis elegans] Length = 703 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 27/245 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++ ++A +N D GN + + EEA G + L EL I GY D F+ Sbjct: 6 RRCRVATCTVNNWALDFKGNYERIVKTCEEAAALGARIRLGPELEIPGYGCADHFFELDT 65 Query: 63 IQACSSAIDTLKSDTHDGGAGIVV-GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + L + +VV G P + + + N L G ++ +R K+ L + + Sbjct: 66 ERHSWEMLSKLVEKSKKWPNLLVVTGLPTRFRGLLYNCAAALRNGKLLFIRAKMGLADDN 125 Query: 122 EFHEKRTFISG----------------YSNDPIVFRD--------IRLGILICEDIWKNS 157 + E R F+ + + + F D +R+G ICE++W Sbjct: 126 VYRESRWFVKWTETFKHYQMPLNSDIHFDQETVPFGDGILESSDNVRIGFEICEELWSAR 185 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 + L +QG + + + + S + K R ++++ G + V +Y NQ G D + Sbjct: 186 STNVRLAEQGVDIMCNGSGSHHILGKSNYRINQLILGSSAKVGGVYLYANQRGCDGDRVY 245 Query: 216 FDGAS 220 +DGAS Sbjct: 246 YDGAS 250 >gi|77462367|ref|YP_351871.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides 2.4.1] gi|77386785|gb|ABA77970.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides 2.4.1] Length = 514 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%) Query: 251 LSQW--NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 LS W + + +++ ++ EA V L +Y + +IG+SGG+DSAL Sbjct: 29 LSPWFAARLEEQVEKGLFLSPEDLEATGARLVEELVEYRTRTQVSTAVIGMSGGVDSALT 88 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 AA+ A G +V LP + ++ ACA ALG ++ L DL + + ++Q Sbjct: 89 AAL-FKAAGW-HVMGHTLPIEQDPTETDRGIEACA-ALGIEHRPL---DLSGAYEAALAQ 142 Query: 369 FLQ---------EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + E P+ N+++R+R L ++ ++ T N SE++ G+ TL+ Sbjct: 143 LGELDPDLLSSDETPARTRRGNLRARLRMMTLYDQAHRLGGLVAGTDNFSELTAGFWTLH 202 Query: 420 GDMSGGFNPLKDLYKT-------QVFQL--ASWRNSHGITSGLG 454 GD+ G P++ L K+ + +++ A+WR T GLG Sbjct: 203 GDV-GDLAPVQSLLKSWEVPWLARAYRVPEATWRAMP--TDGLG 243 >gi|326505940|dbj|BAJ91209.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 737 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 121/596 (20%), Positives = 207/596 (34%), Gaps = 125/596 (20%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L++A LN D N+ + + A G + + EL ++GY ED ++ Sbjct: 1 MRLLRVATCNLNQWAMDFDTNLRNVKESISRAKAAGAVVRIGPELELTGYGCEDHFLEQD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + S + +G P + N V II +R K++L N Sbjct: 61 TTAHAWECLKDILSGDYTDNILCSIGMPIIFKSVRYNCQVFCLNRKIIMIRPKMSLANDG 120 Query: 122 EFHEKRTFISGYSNDPIV-------------------------FRDIRLGILICEDIWKN 156 + E R F + D +V F D+ L CE+++ Sbjct: 121 NYREFRWFSAWTYKDELVDFQLPIDVSEAIDQETVPFGYGYLQFLDVSLAAETCEELFTA 180 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-ELI 215 + L G E + + S + KL R + + +Y N G L Sbjct: 181 NAPRIDLAFSGVEVFMNASGSHHQLRKLNLRIDSMRNATRLCGGVYMYANHQGCDGGRLY 240 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNF-----------MTEWH-----YDQQLSQWN---- 255 +DG C + Q FS ++ ++ + + +Q S Sbjct: 241 YDGCC-CIAVNGDVVAQGSQFSLKDVEVLDALIDLDAVSSYRACVSSFREQASHVTKVPC 299 Query: 256 --------------YMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + D MY +EE A +C L DY++++ ++ LSG Sbjct: 300 VKVQYKLCQTFRDGMIPTDPIEIMYHCPEEEIAFGPSCWLW--DYLRRSRASGFLLPLSG 357 Query: 302 GIDSALCAAIA-------------------VDA-----------------LGKENVQTIM 325 G DS+ AAI DA L K T+ Sbjct: 358 GADSSSVAAIVGCMCQLVIKDINKGDEQVKADAMRIGQYKDGEFPTDSRELAKRLFYTVY 417 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 + + +S + A A+ +G + +PI +V+ F SL + + P Sbjct: 418 MGTENSSEDTRSRAKRLAEEIGSFHFDVPIDSVVSAFLSLFERLTGKRPRYKVDGGSHTE 477 Query: 376 GIVAENIQSRIRGNILMALSN-----HSKA---MLLTTSNKSEISVGYGTLYGDMSGGFN 427 + +NIQ+RIR + +++ H+K+ ++L +SN E GY T Y S N Sbjct: 478 NLGLQNIQARIRMVLAFMMASLMPWVHNKSGFYLVLGSSNVDEGLRGYLTKYDCSSADIN 537 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 P+ + K + W + S L + E P P+AEL P + D L Sbjct: 538 PIGSVSKQDLRAFLRWAAVNLQYSSLAEV-EAAP-------PTAELEPIRMDYNQL 585 >gi|217077400|ref|YP_002335118.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosipho africanus TCF52B] gi|217037255|gb|ACJ75777.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosipho africanus TCF52B] Length = 264 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 19/219 (8%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA AQ +P G N+ K E+A G LILF EL ISGY + K+ ++ Sbjct: 3 IAAAQFSPKPGKFEYNLKKHIDFIEKAGEIGASLILFPELSISGY-----TYDKNILEDS 57 Query: 67 SSAIDTLKSD----THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 S + ++S+ + IV G PR+ V NSV ++ I DK +L Sbjct: 58 ISFFNEVQSELLKLSRKYNMAIVGGVPRKVLSEVRNSVFVIKKKKEILFYDKTHLFR--- 114 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 EK F+ G F+ +R GILIC +I I + L GA+ L +P+ + Sbjct: 115 -GEKDVFLPGERFLVFKFQGVRFGILICYEIG-FPEISRVLALNGAQVLL----APFAFS 168 Query: 183 KLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 K +K +EI T + + + + G+ + F G+S Sbjct: 169 KERKNIYEIATRARALENGAFLVTSSTSGKGLMDFIGSS 207 >gi|325069026|ref|ZP_08127699.1| NAD synthase [Actinomyces oris K20] Length = 361 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 76/314 (24%), Positives = 123/314 (39%), Gaps = 56/314 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKA-RRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++A L V D A N A +AR A+ G+ L F EL ++GY +DL+ + Sbjct: 28 RVAAVTLPVVPVDPAANAAAIIEQARTLAD-DGVCLAAFPELCLTGYAIDDLLLSDVLLS 86 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +AI+TL++ + D +VVG P + + + N +I+ G + V K LP Y EF+ Sbjct: 87 DVLAAIETLRAASADLLPALVVGAPLRLGDRLYNCALIIQGGRVRGVAPKSYLPTYREFY 146 Query: 125 EKRTFISG----YSNDPIVFRDIRLG---------------------------------- 146 EKR F G + I +R G Sbjct: 147 EKRHFAPGDALPAGVESIELPGVRSGFDGVESAGGAEPVARVPFGANLLFEVEDVPGLTF 206 Query: 147 -ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYV 205 + +CED+W GA L +L+ SP + + R + + S YV Sbjct: 207 HVEVCEDMWVPVPPSSLAALAGATVLVNLSGSPITVGRAEDRE--LLARSSSARGLAAYV 264 Query: 206 NQVGGQDE----LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWN 255 GQ E L +DG + ++ + L + F + T D ++L Q Sbjct: 265 YAAAGQGESSTDLAWDGQTLVYENGELLG-TTERFPDGPRATVVDVDIEGLRAERLRQGT 323 Query: 256 YMSDDSASTMYIPL 269 + D+A T+ P+ Sbjct: 324 FA--DNARTLSSPV 335 >gi|284009000|emb|CBA75923.1| putative carbon-nitrogen hydrolase [Arsenophonus nasoniae] Length = 272 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 19/225 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSFI 63 L+IA+AQ++ ++GD N+ K + +EA + D+I F EL +GY PE L + S Sbjct: 2 LQIALAQIDTILGDKESNLLKIAKLCKEAASKNTDIICFPELATTGYSPELLGTELWSLS 61 Query: 64 QACSSAIDTL--KSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGN--IIAVRDKINL 117 ++ D L K TH I+ GF + + + NS I N I K +L Sbjct: 62 ESKGEETDQLLSKLSTHL-NLTIICGFIERGEILGKIFNSAGIWTPNNESWIGTFQKTHL 120 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 N HE+ F +G N PI R+G++IC D + + L QGA+ LF L A Sbjct: 121 VN----HERSWFTAG-KNIPIFDTPKCRIGLMICHDA-GFPELARILTLQGADILF-LPA 173 Query: 177 SPYYHNKLKKRHEIVTGQISH-VHLPIIYVNQVGGQDELIFDGAS 220 + + NK + + + +HL + VN+ G + +L F G S Sbjct: 174 AWHKENKDIWSINCASRALENGIHL--VAVNRWGKEKDLNFFGGS 216 >gi|256422948|ref|YP_003123601.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Chitinophaga pinensis DSM 2588] gi|256037856|gb|ACU61400.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Chitinophaga pinensis DSM 2588] Length = 291 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 25/294 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K+K+ Q++ G+ A N+AKA EA +G ++ ELF S Y D+ + Sbjct: 1 MSKVKVGFVQMS-CSGNKAENLAKATERIREAAAKGAQIVCLQELFTSLYFC-DVEDYDN 58 Query: 62 FIQA---CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 F A + D L+ + G I+ + +G+ N+ +LDA G+ + K++ Sbjct: 59 FSLAEPIPGPSTDALQKVAGELGVVIIASLFEKRAQGLYHNTTAVLDADGSYLGKYRKMH 118 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 +P+ ++EK F G VF+ G+LIC D W + GAE LF Sbjct: 119 IPDDPAYYEKFYFTPG-DLGYKVFKTKFATFGVLICWDQWY-PEAARITALMGAEILFYP 176 Query: 175 NASPYYHNK-----LKKRHEIVTGQISHV---HLPIIYVNQVGGQDE--LIFDGASFCFD 224 A + ++ +++ + T Q SH + ++ VN+VG + E + F G SF + Sbjct: 177 TAIGWATSQDEATNVEQYNAWQTIQRSHAVANGIHVVSVNRVGFEQEGAMKFWGGSFIAN 236 Query: 225 GQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSDDSASTMYIPLQEEEAD 275 + +Q H +E+ F+ E D+ + W +M D + Y P+ + D Sbjct: 237 PFGSIIYQASHENEEVFVQELDLGQTDRYRTHWPFMRDRRIDS-YAPITKRFID 289 >gi|253574036|ref|ZP_04851378.1| N-carbamoylputrescine amidase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846513|gb|EES74519.1| N-carbamoylputrescine amidase [Paenibacillus sp. oral taxon 786 str. D14] Length = 292 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 66/276 (23%), Positives = 120/276 (43%), Gaps = 21/276 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLV 57 ++ +K+A Q++ + NIAKA R EA RQG +IL ELF + Y D Sbjct: 1 MRNVKVAATQMS-CSSNKEENIAKADRLVREAARQGAQIILLQELFETPYFCQKEKSDYY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 + ++ ++AI + + + + F + NS+ ++DA G ++ + K + Sbjct: 60 VYATELEE-NAAIQHFRKVAKELEVVLPISFYEKKNNARYNSLAVIDADGEVLGLYRKSH 118 Query: 117 LPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + R ++G+ +C D W + + GAE LF Sbjct: 119 IPDGPGYEEKFYFNPGDTGFKVWKTRYAKIGVGVCWDQWY-PEAARCMALMGAELLFYPT 177 Query: 173 SLNASPYYHNKLKKRHE--IVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQ 226 ++ + P + K H + G + +P+I N+VG + + + F G+SF Q Sbjct: 178 AIGSEPQDSSIDSKDHWQMCMLGHAASNLVPVIASNRVGVESDEDSSITFYGSSFIAGPQ 237 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSD 259 + E + E+ DQ Q +W D Sbjct: 238 GNKVAEANRTEETVLVAEFDLDQLEIQRIEWGIFRD 273 >gi|88601353|ref|YP_501531.1| peptidyl-arginine deiminase [Methanospirillum hungatei JF-1] gi|88186815|gb|ABD39812.1| agmatine deiminase [Methanospirillum hungatei JF-1] Length = 631 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 16/224 (7%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS-FIQACSSA-IDTLKSDTHD 79 NI A EA G +I ELF + Y P+ + S F C A I + Sbjct: 19 NIQHAMENIREAAESGAQIICLPELFSTPYFPQHIGLDSSPFTDTCDGATIYRFSKLALE 78 Query: 80 GGAGIVVGFPRQDQEG-VLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDP 137 G ++V + + + NS V++DA G++ KI++P F+EK F G Sbjct: 79 LGCVLIVPICEKSSDNRIYNSAVVIDADGSVFRPYRKIHIPQDPLFYEKGYFNPGDEYRV 138 Query: 138 IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL------KKRHEIV 191 + L +LIC D W + + GA+ +F A + ++ K+ +++ Sbjct: 139 YKTKYANLAVLICFDQWF-PEAAREVALNGADIIFYPTAIGHIRGEIPAEGDWKESWKVI 197 Query: 192 TGQISHV---HLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 Q SH +P+ VN+ G +DEL F G SF D ++ Q Sbjct: 198 --QRSHAIANSIPVAAVNRCGWEDELFFFGGSFICDAFGKILVQ 239 >gi|254461352|ref|ZP_05074768.1| hydrolase in PqqF 5'region [Rhodobacterales bacterium HTCC2083] gi|206677941|gb|EDZ42428.1| hydrolase in PqqF 5'region [Rhodobacteraceae bacterium HTCC2083] Length = 261 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 8/218 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AI Q+N V + N A +A +A DLI+F E+ ++GY +K Sbjct: 1 MKLAIFQMNSVDRSVTENAALFDQACADAKSGNADLIIFPEMALTGYNIGADRIRKLAEP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSEF 123 I TL+ G+V GFP D E V N+ VI+D AG+++++ K +L + + Sbjct: 61 CDGPMIQTLRDMAKHHRIGVVCGFPELDGEQVFNAAVIIDAAGSVLSICRKAHL--FGDV 118 Query: 124 HEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 ++ F + P+V F D +G IC D+ + + + GA+ + A+ + Sbjct: 119 -DRAAFSPADTLCPLVQFGDWSVGFAICYDV-EFPELVRAYALAGADIVLVPTANMLPYV 176 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + R +V + + + Y N+VG + + G S Sbjct: 177 GIATR--VVPARAEENEIYVAYANRVGREGAFEYCGLS 212 >gi|114568922|ref|YP_755602.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Maricaulis maris MCS10] gi|114339384|gb|ABI64664.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Maricaulis maris MCS10] Length = 285 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 20/235 (8%) Query: 1 MLKKLKIAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLV 57 M + LKIA L G D+ NIA +A QG +IL ELF Y +D Sbjct: 1 MARTLKIA--GLQAAFGSDMTANIATVSELIRDAAGQGAQVILPPELFQGPYFCKVQDEA 58 Query: 58 FKKSFIQA----CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVR 112 F ++ A C +A+ L ++ G I V +D NS+V+LDA G+ + V Sbjct: 59 FFETAWPAMDHPCVTALQPLAAEL---GVVIPVSIYERDGPHYYNSLVMLDADGSALGVY 115 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 K ++P+ + EK F G + + R R+G+ IC D W + + QGAE L Sbjct: 116 RKSHIPDGPGYMEKFYFRPGNTGFKVWDTRFGRIGVGICWDQW-FPEAARAMALQGAEVL 174 Query: 172 F---SLNASPY--YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 ++ + P+ + + + G +P++ N++G + +F G+SF Sbjct: 175 LYPTAIGSEPHDDSLDTAARWQRAMQGHAVSNVIPVLAANRIGDEGGQVFYGSSF 229 >gi|39995140|ref|NP_951091.1| carbon-nitrogen family hydrolase [Geobacter sulfurreducens PCA] gi|39981902|gb|AAR33364.1| hydrolase, carbon-nitrogen family [Geobacter sulfurreducens PCA] gi|298504170|gb|ADI82893.1| amidohydrolase, putative [Geobacter sulfurreducens KN400] Length = 259 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 12/231 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +K Q +GDI N+A ++A QG L + E++ +GY ++L Sbjct: 1 MNRTVKAGAVQFTVRLGDIDANVAYVQKALRRLASQGCRLAVLPEMWSTGYAYKEL---N 57 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L + + IV P E V N+ +LD G ++ KI+L + Sbjct: 58 ELAKRTPEVVAELGRLSRELEMVIVGSMPEPHGEKVFNTAYVLDRGELLGSYRKIHL--F 115 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S E R+ G + RLG+ IC D+ + + + L +GAE + P Sbjct: 116 SLMGEDRSLDGGDRWLVVDTHVGRLGVFICYDL-RFPELARRLAVEGAEII----VVPAE 170 Query: 181 HNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 K ++ H ++ + L ++ N G Q +L F G+S D + +L Sbjct: 171 WPKPREEHWRALLRARAIENQLFVVAANCCGVQGKLDFFGSSLIIDPKGEL 221 >gi|317130912|ref|YP_004097194.1| N-carbamoylputrescine amidase [Bacillus cellulosilyticus DSM 2522] gi|315475860|gb|ADU32463.1| N-carbamoylputrescine amidase [Bacillus cellulosilyticus DSM 2522] Length = 292 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 25/278 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+A Q++ D+ NI+KA + EA+ +G ++IL ELF + Y + +K+ Sbjct: 1 MRKVKVAATQMS-CSCDVNENISKADKLVREASDKGANIILIQELFETPYFCQK---EKA 56 Query: 62 FIQACSSAIDTLKSDTHDGGAG------IVVGFPRQDQEGVLNSVVILDA-GNIIAVRDK 114 A ++ I++ ++ H + + F + NS+V++DA G+++ K Sbjct: 57 EYYAYATEIESNRAINHFKKVAKELQVVLPISFYEKKNNARYNSLVVIDADGSLLGTYRK 116 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF- 172 ++P+ + EK F G + + ++G+ IC D W + + GAE LF Sbjct: 117 SHIPDGPGYEEKFYFNPGDTGFKVWNTKYGKIGVGICWDQWY-PEAARCMALMGAELLFY 175 Query: 173 --SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFD 224 ++ + P+ K H ++ G + +P+I N+VG +++ + F G+SF Sbjct: 176 PTAIGSEPHDDTIDSKDHWQTVMLGHAAANLVPVIASNRVGVEEDDDSKITFYGSSFIAG 235 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSD 259 Q + E + E+ D+ Q +W D Sbjct: 236 PQGNKIEEADRTEETVLVAEFDLDELDTQRIEWGIFRD 273 >gi|326437526|gb|EGD83096.1| glutamine dependent NAD synthetase [Salpingoeca sp. ATCC 50818] Length = 708 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 122/598 (20%), Positives = 213/598 (35%), Gaps = 132/598 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + E+ ++G L + EL ISGY D ++ Sbjct: 4 ITVATCSLNQWALDFEGNYERILESIRESKKRGAVLRVGPELEISGYGCNDHFYEPDTFY 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVV--GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + L + H+ IVV G P + N +I G ++ +R K+ L Sbjct: 64 HSYQMLAKLIA--HEDCQDIVVDVGLPMMHKSVRYNCRIIFFNGKVLLIRPKMYLAMNGN 121 Query: 123 FHEKRTFISGYS-------NDPIVFR------------------DIRLGILICEDIWKNS 157 + E R F N P V R D+ +G ICE++W + Sbjct: 122 YREGRWFTPWRRHRTLEDFNLPAVVRKVTGQLSVPFGDGVISANDVTIGSEICEELWSPN 181 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI-F 216 + H+ G + + + S + KL R ++ + +Y N G E + + Sbjct: 182 SPHIHMGLDGIDIFTNGSGSHHELRKLDYRLNLMRDATAKSGGVYLYANSQGNDGERVYY 241 Query: 217 DGASFCFDGQQQLA----FQMK----------------------HFSEQNFMTEWHYDQQ 250 DG + + LA F ++ ++Q ++ + Q Sbjct: 242 DGCALIVLNGKILAQGSQFSLRDVEVLTATIDLEDIRTYRGSLISLADQAAVSNAYPRIQ 301 Query: 251 LSQWNYMSDDSAST-------MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 M SA ++ P ++E A AC L DY++++ + LSGG+ Sbjct: 302 TGHDMCMEHGSARPTRPIEPFLHTP-EQEIALGPACWLW--DYLRRSGLGGFFLPLSGGM 358 Query: 304 DSALCAAI-------AVDALGKENVQ----------------------------TIMLPY 328 DS+ A+I V+A+ N Q T+ + Sbjct: 359 DSSSTASIVCSMCHLVVEAIENGNEQVLADVRRIVRDEEFVPSTPQEIAAKIFFTMYMGT 418 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------GIV 378 +S ++ + A A +G + + + V+ SL + + P + Sbjct: 419 TNSSKETRDRAKGLANEIGAVHYDINMDTAVSAITSLFALVTGKTPKFKVHGGSHQENLA 478 Query: 379 AENIQSRIR-------GNIL-MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 +NIQ+R+R G++L H ++L ++N E GY T Y S NP+ Sbjct: 479 LQNIQARLRMVLSYLFGSLLPWCHGRHGSLLVLGSANVDECLRGYMTKYDCSSADLNPIG 538 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-----HQTDQESL 483 + K + + + L IL P+AEL P QTD+E + Sbjct: 539 GISKADLRRFLPFAAERFKLPSLH--------GILSAKPTAELEPITEGYTQTDEEDM 588 >gi|170720362|ref|YP_001748050.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida W619] gi|169758365|gb|ACA71681.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida W619] Length = 298 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 16/231 (6%) Query: 2 LKKLKIAIAQLNPVVG--DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 + +KIA+ Q +P VG + GN+ A R+G +LI+ EL +GY + Sbjct: 8 ISPVKIAVIQYDPQVGLDNRDGNLKHGLALARRAAREGANLIVLPELANTGYTFQSRAEA 67 Query: 60 KSFIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + Q ++ + + GF +D + +S V+L ++ K +L Sbjct: 68 YAHAQTLQDGPSLQAWADFAQEHQVYLAAGFAERDGLKLYDSAVLLGPEGMLGHYRKAHL 127 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLN- 175 N HEK F G P+ I R+G+LIC DIW + + + QGA+ L SLN Sbjct: 128 WN----HEKLWFTPGDLGFPVFETPIGRIGLLICWDIWF-PEVPRLMAAQGADILCSLNN 182 Query: 176 ----ASPYYHNKLKKRHEIVTGQISHV-HLPIIYVNQVGGQDELIFDGASF 221 P + + +T +HV ++ I N++G + F G S Sbjct: 183 WVWTPPPLFDAAGRCMASYLTMTAAHVNNVYIAAANRIGSERGGRFLGCSL 233 >gi|94039574|dbj|BAE93559.1| NAD synthase NadE [Lettuce yellows phytoplasma] Length = 127 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 6/126 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI ++ VG+ N A + N+ +LF EL +S Y DL F+ +F++ Sbjct: 7 IKIELSSPPLTVGNPLKN---AYSMQNVLNKSKASFVLFPELCLSSYTAGDLFFETTFLE 63 Query: 65 ACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A+D LK+++ +G ++G P E + N VI+ I+ + K +PNY EF Sbjct: 64 QNFQALDWLLKNNSFEGV--YILGMPLALHEVLFNVAVIIQKDKILGITPKKTIPNYKEF 121 Query: 124 HEKRTF 129 EKR F Sbjct: 122 SEKRWF 127 >gi|48146689|emb|CAG33567.1| NADSYN1 [Homo sapiens] Length = 706 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 127/606 (20%), Positives = 211/606 (34%), Gaps = 138/606 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R K+ L N Sbjct: 61 DTLLHSFQVLAALLESPVTQDIICDVGMPVMHRNVRYNCRVIFLNRKILLIRPKMALANE 120 Query: 121 SEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWK 155 + E R F + + +V D +G ICE++W Sbjct: 121 GNYRELRWFTPWSRSRHTEEYFLPRMIQDLTKQETVPFGDAVLVTWDTCIGSEICEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + + S + +K R ++VT S + NQ G D L Sbjct: 181 PHSPHIDMGLDGVEIITNASGSHHVLHKANTRVDLVTMVTSKNGGIYLLANQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQM---------KHFSEQN----------- 240 +DG + F D + L + S +N Sbjct: 241 YYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRASPYPR 300 Query: 241 ----FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F H D + +W Y S +EE + AC L D+++++ Sbjct: 301 VKVDFALSCHEDLLAPISEPIEWKYHSP----------EEEISLGPACW--LWDFLRRSQ 348 Query: 292 FHKVIIGLSGGIDSALCAAI----------AVDALGKE---NVQTIMLPYKYTSPQSLED 338 ++ LSGG+DSA A + AV + +E +V+TI+ YT PQ D Sbjct: 349 QAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLADVRTIVNQISYT-PQDPRD 407 Query: 339 AAA-----------------CAKA------LGCKYDVLPIHDLVNHFFSLMSQFLQEEP- 374 C +A +G + L I V + S + P Sbjct: 408 LCGRILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDPAVKAVMGIFSLVTGKSPL 467 Query: 375 ---------SGIVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNKSEISVGYGT 417 + +N+Q+RIR + L + H ++L ++N E +GY T Sbjct: 468 FAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGVHGGLLVLGSANVDESLLGYLT 527 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 Y S NP+ + KT + + L + ++ P+ E P A+ + Q Sbjct: 528 KYDCSSADINPIGGISKTDLRAFVQFCIQRFQLPALQSI--LLAPATAELEPLADGQVSQ 585 Query: 478 TDQESL 483 TD+E + Sbjct: 586 TDEEDM 591 >gi|88801524|ref|ZP_01117052.1| putative NH(3)-dependent NAD+ synthetase NadE [Polaribacter irgensii 23-P] gi|88782182|gb|EAR13359.1| putative NH(3)-dependent NAD+ synthetase NadE [Polaribacter irgensii 23-P] Length = 262 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 11/168 (6%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAA 341 L+DY +K+N +IG+SGGIDSAL + + K T+ + QS + A Sbjct: 14 LKDYAEKSNIKGFVIGVSGGIDSALTSTLC----AKTGFPTLCVEMPIHQAQSHVTRAED 69 Query: 342 CAKALGCKYD-----VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 K L +Y+ + + + S++ Q + N ++R+R L + Sbjct: 70 HIKQLKVRYNNVSEVRVDLTGMYEGLKSVVPQLPNTPKEELSLANTRARLRMTTLYYFAG 129 Query: 397 HSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 ++ T NK E VG+ T YGD +P+ DL K++V++LA++ Sbjct: 130 LHSYVVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVYELAAY 177 >gi|260063730|ref|YP_003196810.1| putative NH(3)-dependent NAD synthetase [Robiginitalea biformata HTCC2501] gi|88783175|gb|EAR14348.1| putative NH(3)-dependent NAD synthetase [Robiginitalea biformata HTCC2501] Length = 262 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 23/173 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSAL----CAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L+DY + ++G+SGGIDSAL CA ++ L E +P ++ Q + Sbjct: 14 LKDYARDAGMKGFVVGVSGGIDSALTSTLCARTGLEVLCLE------MPIHQSTAQ-VTR 66 Query: 339 AAACAKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 AA + L +Y ++ P+ D ++ E+ + N ++R+R Sbjct: 67 AANHIEWLRNQYPNVRSEWINLTPVFD---SLIGVLPPVESEDSRFMSLANTRARLRMTS 123 Query: 391 LMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 L + K ++ T NK E VG+ T YGD +P+ DL KT+V+QLAS Sbjct: 124 LYYFAALEKYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLLKTEVYQLAS 176 >gi|225863956|ref|YP_002749334.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus 03BB102] gi|229184233|ref|ZP_04311442.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BGSC 6E1] gi|254766705|sp|C1ERC2|NADE_BACC3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|225788369|gb|ACO28586.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus 03BB102] gi|228599348|gb|EEK56959.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BGSC 6E1] Length = 272 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 24/237 (10%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQ 322 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + E NV Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNVT 74 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 I + Y + +DA + + V I V+ F + L E + N Sbjct: 75 FIAVRLPYKVQKDEDDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNKGN 134 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 135 VKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK------- 187 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 --RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|10433831|dbj|BAB14034.1| unnamed protein product [Homo sapiens] gi|119595199|gb|EAW74793.1| NAD synthetase 1, isoform CRA_b [Homo sapiens] Length = 706 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 127/606 (20%), Positives = 210/606 (34%), Gaps = 138/606 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R K+ L N Sbjct: 61 DTLLHSFQVLAALVESPVTQDIICDVGMPVMHRNVRYNCRVIFLNRKILLIRPKMALANE 120 Query: 121 SEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWK 155 + E R F + + +V D +G ICE++W Sbjct: 121 GNYRELRWFTPWSRSRHTEEYFLPRMIQDLTKQETVPFGDAVLVTWDTCIGSEICEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + + S + K R ++VT S + NQ G D L Sbjct: 181 PHSPHIDMGLDGVEIITNASGSHHVLRKANTRVDLVTMVTSKNGGIYLLANQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQM---------KHFSEQN----------- 240 +DG + F D + L + S +N Sbjct: 241 YYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRASPYPR 300 Query: 241 ----FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F H D + +W Y S +EE + AC L D+++++ Sbjct: 301 VKVDFALSCHEDLLAPISEPIEWKYHSP----------EEEISLGPACW--LWDFLRRSQ 348 Query: 292 FHKVIIGLSGGIDSALCAAI----------AVDALGKE---NVQTIMLPYKYTSPQSLED 338 ++ LSGG+DSA A + AV + +E +V+TI+ YT PQ D Sbjct: 349 QAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLADVRTIVNQISYT-PQDPRD 407 Query: 339 AAA-----------------CAKA------LGCKYDVLPIHDLVNHFFSLMSQFLQEEP- 374 C +A +G + L I V + S + P Sbjct: 408 LCGRILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDPAVKAVMGIFSLVTGKSPL 467 Query: 375 ---------SGIVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNKSEISVGYGT 417 + +N+Q+RIR + L + H ++L ++N E +GY T Sbjct: 468 FAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGVHGGLLVLGSANVDESLLGYLT 527 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 Y S NP+ + KT + + L + ++ P+ E P A+ + Q Sbjct: 528 KYDCSSADINPIGGISKTDLRAFVQFCIQRFQLPALQSI--LLAPATAELEPLADGQVSQ 585 Query: 478 TDQESL 483 TD+E + Sbjct: 586 TDEEDM 591 >gi|118581273|ref|YP_902523.1| NAD synthetase [Pelobacter propionicus DSM 2379] gi|118503983|gb|ABL00466.1| NH(3)-dependent NAD(+) synthetase [Pelobacter propionicus DSM 2379] Length = 332 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 49/198 (24%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC------ 348 +++GLSGGIDS++ AA+AV ALG++ V +++P + +S SL A LG Sbjct: 40 LVVGLSGGIDSSVTAALAVKALGQDRVLGLLMPERNSSGDSLHLGKMVAGYLGIETVTEE 99 Query: 349 ------------KYD-----VLPIHD------------LVNHFF------------SLMS 367 KYD V+P + L H + +++ Sbjct: 100 ITNILEVVGFYQKYDSAVCRVIPEYGRGWKSKIVISNALKQHSYASFYIVAQPKEGAVIK 159 Query: 368 QFLQEEP--SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + L EP + A N + RIR + ++ + T N+ E G+ GD + Sbjct: 160 KRLSLEPYLEIVAATNFKQRIRKMLEYYHADRLNYAVAGTPNRLEYDQGFFVKLGDGAAD 219 Query: 426 FNPLKDLYKTQVFQLASW 443 P+ LYK+QV+QLA + Sbjct: 220 IKPIAHLYKSQVYQLAEY 237 >gi|293365439|ref|ZP_06612148.1| N-carbamoylputrescine amidase [Streptococcus oralis ATCC 35037] gi|307703394|ref|ZP_07640336.1| N-carbamoylputrescine amidase [Streptococcus oralis ATCC 35037] gi|291315807|gb|EFE56251.1| N-carbamoylputrescine amidase [Streptococcus oralis ATCC 35037] gi|307622801|gb|EFO01796.1| N-carbamoylputrescine amidase [Streptococcus oralis ATCC 35037] Length = 291 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 27/246 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED-----L 56 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ Sbjct: 1 MRNVRVAAIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFELPYFCQERQYDYY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + +S I+ ++AI K + + + F +D + NS+ ++DA G ++ V K Sbjct: 60 QYAQSVIE--NTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ + EK F G + + R ++GI IC D W + L GAE LF Sbjct: 118 HIPDDHYYQEKFYFTPGNTGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYP 176 Query: 173 -SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQD-ELIFDG 218 ++ + P + + G + +P+I N+ GGQ+ L F G Sbjct: 177 TAIGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQNSSLDFYG 236 Query: 219 ASFCFD 224 +SF D Sbjct: 237 SSFMTD 242 >gi|7022784|dbj|BAA91722.1| unnamed protein product [Homo sapiens] gi|13177721|gb|AAH03638.1| NAD synthetase 1 [Homo sapiens] gi|13177799|gb|AAH03666.1| NAD synthetase 1 [Homo sapiens] Length = 706 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 127/606 (20%), Positives = 210/606 (34%), Gaps = 138/606 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R K+ L N Sbjct: 61 DTLLHSFQVLAALLESPVTQDIICDVGMPVMHRNVRYNCRVIFLNRKILLIRPKMALANE 120 Query: 121 SEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWK 155 + E R F + + +V D +G ICE++W Sbjct: 121 GNYRELRWFTPWSRSRHTEEYFLPRMIQDLTKQETVPFGDAVLVTWDTCIGSEICEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + + S + K R ++VT S + NQ G D L Sbjct: 181 PHSPHIDMGLDGVEIITNASGSHHVLRKANTRVDLVTMVTSKNGGIYLLANQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQM---------KHFSEQN----------- 240 +DG + F D + L + S +N Sbjct: 241 YYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRASPYPR 300 Query: 241 ----FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F H D + +W Y S +EE + AC L D+++++ Sbjct: 301 VKVDFALSCHEDLLAPISEPIEWKYHSP----------EEEISLGPACW--LWDFLRRSQ 348 Query: 292 FHKVIIGLSGGIDSALCAAI----------AVDALGKE---NVQTIMLPYKYTSPQSLED 338 ++ LSGG+DSA A + AV + +E +V+TI+ YT PQ D Sbjct: 349 QAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLADVRTIVNQISYT-PQDPRD 407 Query: 339 AAA-----------------CAKA------LGCKYDVLPIHDLVNHFFSLMSQFLQEEP- 374 C +A +G + L I V + S + P Sbjct: 408 LCGRILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDPAVKAVMGIFSLVTGKSPL 467 Query: 375 ---------SGIVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNKSEISVGYGT 417 + +N+Q+RIR + L + H ++L ++N E +GY T Sbjct: 468 FAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGVHGGLLVLGSANVDESLLGYLT 527 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 Y S NP+ + KT + + L + ++ P+ E P A+ + Q Sbjct: 528 KYDCSSADINPIGGISKTDLRAFVQFCIQRFQLPALQSI--LLAPATAELEPLADGQVSQ 585 Query: 478 TDQESL 483 TD+E + Sbjct: 586 TDEEDM 591 >gi|212533653|ref|XP_002146983.1| glutamine dependent NAD+ synthetase, putative [Penicillium marneffei ATCC 18224] gi|210072347|gb|EEA26436.1| glutamine dependent NAD+ synthetase, putative [Penicillium marneffei ATCC 18224] Length = 723 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 119/580 (20%), Positives = 208/580 (35%), Gaps = 120/580 (20%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + ++A G L + EL I GY D + ++ Sbjct: 5 VTVATCNLNQWALDFEGNTQRIIESIQKAKAAGAKLRVGPELEICGYGCLDHLLEQDLFL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC ++ + +D + +G P Q + N VI G I+ +R K+ L N + Sbjct: 65 ACWEMLERILTDESCNDILLDIGMPIQHRNIRYNCRVICLNGKILLIRPKMFLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSN----DPIVFR-DIRLGILICEDIWKNSNI 159 E R F + G ++ D +V D +G CE+++ + Sbjct: 125 EMRHFTPWCQPQKTEQYHLPRRIQRLQGATHVTFGDAVVSTPDTCIGAETCEELFTPDSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + + S + KL+ R ++ +Y NQ G D L +DG Sbjct: 185 HTQMSLDGVEVITNSSGSHFTLRKLETRLSLIMEATRKNGGIYLYANQQGCDGDRLYYDG 244 Query: 219 ASF------------------------CFDGQQQLAFQM---KHFSEQNFMTEWHYDQQL 251 + D ++ A++ + F ++ Q Sbjct: 245 CAMIIVNGTMVAQGTQFSLNDVEVVTATIDLEEVRAYRCSMSRAFQAAQSKAKYERIQTS 304 Query: 252 SQWNYMSDDSASTM--YIPL-------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + + DD T IP+ +EE A C L DY++++ ++ LSGG Sbjct: 305 FELSSEEDDLDLTRGPSIPITPRYHSPEEEIALCAGCYLW--DYLRRSGVAGYLVPLSGG 362 Query: 303 IDSALCAAI-------AVDALGKENVQTI-----------------------------ML 326 IDS A I A++A+ N Q I M Sbjct: 363 IDSCATATIVFSMCRLAIEAVKAGNAQVIEDVKRLAKYSEKLPETPQELCNQIFHTIYMG 422 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------G 376 + +S ++ + A A+A+G + L I ++ + +L+ L +P Sbjct: 423 MSQQSSKETRQRARDLAEAIGSYHVNLDIDEVYHAQKNLIKTTLGFDPKFKVEGGSQAEN 482 Query: 377 IVAENIQSRIR-------GNIL---MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 ++ +NIQ+R R IL ++L ++N E GY T Y S Sbjct: 483 LMLQNIQARSRMVTAYEFAQILPTTRGRPGGGGLLVLGSANVGESLRGYLTKYDCSSADI 542 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NP+ + K + + +W L IP + LE Sbjct: 543 NPIGSIDKADLKRFIAWAEKVYDIPCLQEFLTAIPTAELE 582 >gi|15902867|ref|NP_358417.1| Beta-alanine synthase or beta-ureidopropionase [Streptococcus pneumoniae R6] gi|116516894|ref|YP_816298.1| hydrolase, carbon-nitrogen family protein [Streptococcus pneumoniae D39] gi|168482992|ref|ZP_02707944.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CDC1873-00] gi|15458424|gb|AAK99627.1| Beta-alanine synthase or beta-ureidopropionase [Streptococcus pneumoniae R6] gi|116077470|gb|ABJ55190.1| hydrolase, carbon-nitrogen family protein [Streptococcus pneumoniae D39] gi|172043532|gb|EDT51578.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CDC1873-00] gi|332201387|gb|EGJ15457.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae GA47368] Length = 291 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 26/282 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVATIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFEHPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVAENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWNTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ---WNYMSD 259 F D + + + E + ++ D+ S+ W D Sbjct: 239 FMTDETGAILERAERQEEAVLLATYNLDKGASERLNWGLFRD 280 >gi|15900802|ref|NP_345406.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae TIGR4] gi|111658136|ref|ZP_01408834.1| hypothetical protein SpneT_02000702 [Streptococcus pneumoniae TIGR4] gi|148984664|ref|ZP_01817932.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP3-BS71] gi|148992945|ref|ZP_01822564.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP9-BS68] gi|148996986|ref|ZP_01824640.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP11-BS70] gi|149002467|ref|ZP_01827401.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP14-BS69] gi|149006403|ref|ZP_01830115.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP18-BS74] gi|149010435|ref|ZP_01831806.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP19-BS75] gi|149019509|ref|ZP_01834828.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP23-BS72] gi|168485872|ref|ZP_02710380.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CDC1087-00] gi|168491010|ref|ZP_02715153.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CDC0288-04] gi|168575585|ref|ZP_02721521.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae MLV-016] gi|169833217|ref|YP_001694375.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae Hungary19A-6] gi|182683869|ref|YP_001835616.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae CGSP14] gi|194398116|ref|YP_002037559.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae G54] gi|225854429|ref|YP_002735941.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae JJA] gi|225856586|ref|YP_002738097.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae P1031] gi|225858720|ref|YP_002740230.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae 70585] gi|225861184|ref|YP_002742693.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae Taiwan19F-14] gi|237651125|ref|ZP_04525377.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CCRI 1974] gi|237821877|ref|ZP_04597722.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CCRI 1974M2] gi|298230759|ref|ZP_06964440.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254580|ref|ZP_06978166.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503065|ref|YP_003725005.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae TCH8431/19A] gi|303254983|ref|ZP_07341062.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae BS455] gi|303259834|ref|ZP_07345809.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP-BS293] gi|303262248|ref|ZP_07348192.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP14-BS292] gi|303264670|ref|ZP_07350588.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae BS397] gi|303267171|ref|ZP_07353038.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae BS457] gi|303269419|ref|ZP_07355188.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae BS458] gi|307067579|ref|YP_003876545.1| putative amidohydrolase [Streptococcus pneumoniae AP200] gi|307127524|ref|YP_003879555.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae 670-6B] gi|14972396|gb|AAK75046.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae TIGR4] gi|147756686|gb|EDK63726.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP11-BS70] gi|147759404|gb|EDK66396.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP14-BS69] gi|147762180|gb|EDK69142.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP18-BS74] gi|147764916|gb|EDK71845.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP19-BS75] gi|147923055|gb|EDK74170.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP3-BS71] gi|147928397|gb|EDK79413.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP9-BS68] gi|147930884|gb|EDK81864.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP23-BS72] gi|168995719|gb|ACA36331.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae Hungary19A-6] gi|182629203|gb|ACB90151.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae CGSP14] gi|183571035|gb|EDT91563.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CDC1087-00] gi|183574681|gb|EDT95209.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CDC0288-04] gi|183578517|gb|EDT99045.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae MLV-016] gi|194357783|gb|ACF56231.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae G54] gi|225721319|gb|ACO17173.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae 70585] gi|225722705|gb|ACO18558.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae JJA] gi|225725231|gb|ACO21083.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae P1031] gi|225726488|gb|ACO22339.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae Taiwan19F-14] gi|298238660|gb|ADI69791.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae TCH8431/19A] gi|301799907|emb|CBW32486.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae OXC141] gi|301801769|emb|CBW34480.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae INV200] gi|302598063|gb|EFL65130.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae BS455] gi|302636571|gb|EFL67062.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP14-BS292] gi|302639039|gb|EFL69499.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP-BS293] gi|302641038|gb|EFL71416.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae BS458] gi|302643286|gb|EFL73566.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae BS457] gi|302645757|gb|EFL75986.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae BS397] gi|306409116|gb|ADM84543.1| Predicted amidohydrolase [Streptococcus pneumoniae AP200] gi|306484586|gb|ADM91455.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae 670-6B] gi|327389205|gb|EGE87550.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae GA04375] gi|332075535|gb|EGI86003.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae GA17545] gi|332202778|gb|EGJ16847.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae GA41317] gi|332204925|gb|EGJ18990.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae GA47901] Length = 291 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVATIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFEHPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVAENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWNTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|315613158|ref|ZP_07888068.1| N-carbamoylputrescine amidase [Streptococcus sanguinis ATCC 49296] gi|315314720|gb|EFU62762.1| N-carbamoylputrescine amidase [Streptococcus sanguinis ATCC 49296] Length = 291 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +K+A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVKVAAIQMQ-CAKDVATNIQTAERLVRQAADQGAQIILLPELFERPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVTENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|313496746|gb|ADR58112.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida BIRD-1] Length = 264 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 23/226 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P D+ GN+ + + A +G L++ E+F++GY ++ Sbjct: 1 MRIALYQGAPKPLDVPGNLQRLLHQAQLAAERGAQLLVCPEMFLTGYNIGLAQVERLAEA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A A T+ IV G+P R D + NSV ++DA +L NY + Sbjct: 61 ADGPAAMTVVEIAQAHRIAIVYGYPERGDDGAIYNSVQLIDA-------HGRSLSNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F G + P+V ++G+LIC DI N + L GAE + + N Sbjct: 114 HLFGELDRSMFSPGADHFPVVELEGWKVGLLICYDIEFPEN-ARRLALDGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +PY + ++ R Q ++Y N G +DE+ + G S Sbjct: 173 MTPYDFTCQVTVRARAQENQCY-----LVYANYCGAEDEIQYCGQS 213 >gi|168494351|ref|ZP_02718494.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CDC3059-06] gi|221231695|ref|YP_002510847.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae ATCC 700669] gi|183575700|gb|EDT96228.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae CDC3059-06] gi|220674155|emb|CAR68678.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae ATCC 700669] Length = 291 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVATIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFEHPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVAENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGGVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWNTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|229161010|ref|ZP_04288999.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus R309803] gi|228622578|gb|EEK79415.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus R309803] Length = 272 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 30/225 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + KE + LPYK Q Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRKEGGNATFIAVRLPYKV---QK 86 Query: 336 LEDAAACAKAL--GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 ED A A + I V+ F S L E + N+++RIR A Sbjct: 87 DEDDAQLALQFIQADQSTAFDIASTVDAFSSQYEILLGESLTDFNKGNVKARIRMVTQYA 146 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + + +++ T + +E G+ T +GD PL L K R + L Sbjct: 147 IGGQNGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQEL 197 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 198 GA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|269114954|ref|YP_003302717.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma hominis] gi|268322579|emb|CAX37314.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma hominis ATCC 23114] Length = 254 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 66/276 (23%), Positives = 121/276 (43%), Gaps = 59/276 (21%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA---------LGKEN---VQTI 324 N V L+ + +N + +G+SGGIDS+ A I+ A L EN ++ Sbjct: 23 NKIVSWLKQKINSSNSKGITLGISGGIDSSTLALISELAFPNGCKFYYLKTENDSYTESH 82 Query: 325 MLPYKYTSPQSLE--DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI 382 + + +E + ++C K ++ I +++N G +A N Sbjct: 83 IKLLQLKLKTKIEIINLSSCFKK------IVKIANIINQ--------------GSIA-NT 121 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 +SR+ L L+ +K ++L T N E +GY T YGD P ++ K+ V+ +AS Sbjct: 122 KSRLFMTTLYGLAFQNKNLVLGTDNFDEYYLGYFTKYGDGGCDLLPFANIKKSDVYAMAS 181 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES 502 LG +P I++K PSA L +Q D+E L + E Sbjct: 182 L---------LG-----VPQEIIDKKPSATLYKNQYDEEELG----------FKYSDFEK 217 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++ + ++E ++ ++++ +E+KR+ P G K+ Sbjct: 218 YLLDQTSVSEELIKKIKNIHKQTEHKRKAIPKGPKL 253 >gi|229017333|ref|ZP_04174236.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH1273] gi|229023509|ref|ZP_04180005.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH1272] gi|228737777|gb|EEL88277.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH1272] gi|228743896|gb|EEL93995.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH1273] Length = 272 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 ++ LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FISVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDSFSNQYENLLGESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|26553647|ref|NP_757581.1| NH(3)-dependent NAD+ synthetase [Mycoplasma penetrans HF-2] gi|46396445|sp|Q8EWK9|NADE_MYCPE RecName: Full=NH(3)-dependent NAD(+) synthetase gi|26453653|dbj|BAC43985.1| NH(3)-dependent NAD+ synthetase [Mycoplasma penetrans HF-2] Length = 243 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 24/189 (12%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 + G+SGGIDSAL AIA K+ + L + S +DA + Sbjct: 29 VYGVSGGIDSALICAIA-SKFFKDRSLAVRLDI-FNSVNDTKDANLVISHF-------KV 79 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + + + + + F+++ P +A N++SR+R L + ++ TSN E+ G Sbjct: 80 NSVDKNLEQVFNTFIKDLPDNKLALMNLKSRLRMVCLYYYAQTYNYLVCGTSNADELYTG 139 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T +GD F PL +L KT V + + LG +P I+ K PSA L Sbjct: 140 YFTKFGDSGSDFIPLANLTKTDVRECSKI---------LG-----VPSQIINKDPSAGLF 185 Query: 475 PHQTDQESL 483 +Q D++ L Sbjct: 186 ENQKDEDDL 194 >gi|306825222|ref|ZP_07458564.1| N-carbamoylputrescine amidase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432658|gb|EFM35632.1| N-carbamoylputrescine amidase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 291 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVAAIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFERPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVTENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|257387228|ref|YP_003177001.1| NAD+ synthetase [Halomicrobium mukohataei DSM 12286] gi|257169535|gb|ACV47294.1| NAD+ synthetase [Halomicrobium mukohataei DSM 12286] Length = 282 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 18/247 (7%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +++ V++ L G + S + A +A++A+G + V ++LP S A A A L Sbjct: 42 LERAGAEGVVVALDGRVGSTVAAVLAIEAVGVDRVCGLVLPANMNDEASARAAEAVASML 101 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 +Y+ L + L++ F ++ + + +N R R L ++N + ++L + Sbjct: 102 SIEYERLQLRPLLSAFQRVLGASGEPADDVVALDNAGERFRMACLYYVANTTDRLVLGSV 161 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 +++ +G T +GD PL LY+T+V LA + +P IL+ Sbjct: 162 DRTRRLLGSTTKHGDDGVDLAPLAPLYRTEVRALARAVD--------------VPSDILD 207 Query: 467 KSPSAELRPHQTDQESLPPYP-ILDDIIKRIVENEE--SFINNDQEYNDETVRYVEHLLY 523 +S R +D E L P LD+I+ +V+ + + + + TV+ V Sbjct: 208 RSTRTAGR-ADSDPEQLGVDPETLDEILHALVDEAQPPAAVAERLAVDRATVQRVRQWRE 266 Query: 524 GSEYKRR 530 + +KRR Sbjct: 267 TTRHKRR 273 >gi|57530028|ref|NP_001006465.1| glutamine-dependent NAD(+) synthetase [Gallus gallus] gi|82082897|sp|Q5ZMA6|NADE_CHICK RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing]; AltName: Full=NAD(+) synthetase gi|53127508|emb|CAG31137.1| hypothetical protein RCJMB04_2l1 [Gallus gallus] Length = 707 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 129/605 (21%), Positives = 203/605 (33%), Gaps = 144/605 (23%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A LN D GN + R+ A +G L EL I GY D ++ Sbjct: 1 MGRAVSVAACALNQWALDFEGNAERILRSISIAKSKGARYRLGPELEICGYGCADHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R KI+L N Sbjct: 61 DTLLHSFQVLAKLLESPATQDIICDVGMPLMHRNVRYNCRVIFLNKKILLIRPKISLANA 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 + E R F ++G P + +D LG ICE++W Sbjct: 121 GNYRELRWFTPWNKARHVEEYLLPRIIQEVTGQDTVPFGDAVLATKDTCLGTEICEELWA 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 ++ + G E + + S + K R ++V + I NQ G D L Sbjct: 181 PNSPHIEMGLDGVEIFTNSSGSHHVLRKAHTRVDLVNSATAKNGGIYILSNQKGCDGDRL 240 Query: 215 IFDGASFCFDGQQQLAFQMKHFS---------EQNFMTEWHYDQQLSQWNY--------- 256 +DG + + +A Q FS + Y ++S N Sbjct: 241 YYDGCAMISMNGETVA-QGSQFSLDDVEVLVATLDLEDVRSYRAEISSRNLAASKVNPFP 299 Query: 257 ---------MSDDSASTMYIPLQ------EEEADYN-ACVLSLRDYVQKNNFHKVIIGLS 300 SDD + + +P+Q EEE AC L DY++++ ++ LS Sbjct: 300 RIKVNFALSCSDDLSVPICVPIQWRHHSPEEEICLGPACW--LWDYLRRSKQAGFLLPLS 357 Query: 301 GGIDSALCAAIA-------------------VDA----------------LGKENVQTIM 325 GGIDS+ A I DA K T Sbjct: 358 GGIDSSATACIVYSMCRQVCLAVKNGNSEVLADARKIVHDETYIPEDPQEFCKRVFTTCY 417 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 + + +S + A A+ +G + L I V + S P Sbjct: 418 MASENSSQDTRNRAKLLAEQIGSYHINLNIDAAVKAIVGIFSMVTGRTPRFSVYGGSRRE 477 Query: 376 GIVAENIQSRIR---GNILMALSNHSKAM-----LLTTSNKSEISVGYGTLYGDMSGGFN 427 + +N+Q+R+R + L+ ++ M +L ++N E GY T Y S N Sbjct: 478 NLALQNVQARVRMVPAYLFAQLTLWTRGMPGGLLVLGSANVDESLRGYLTKYDCSSADIN 537 Query: 428 PLKDLYKTQV----------FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 P+ + KT + FQL + R SI+ P+AEL P Sbjct: 538 PIGGISKTDLKNFIQYCIENFQLTALR------------------SIMAAPPTAELEPLM 579 Query: 478 TDQES 482 Q S Sbjct: 580 DGQVS 584 >gi|182417379|ref|ZP_02948713.1| N-carbamoylputrescine amidase [Clostridium butyricum 5521] gi|237667083|ref|ZP_04527067.1| N-carbamoylputrescine amidase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378809|gb|EDT76331.1| N-carbamoylputrescine amidase [Clostridium butyricum 5521] gi|237655431|gb|EEP52987.1| N-carbamoylputrescine amidase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 284 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 128/291 (43%), Gaps = 33/291 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+A Q++ D+ + KA +A +QG +++L ELF + Y + ++ Sbjct: 1 MRKIKVAATQMS-CTWDLEATLKKAEDMVRDAKKQGANIVLLQELFETPYFCQTESYEYL 59 Query: 62 FIQAC---SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 I + A++ K + I + F + NS+V++DA G+++ K ++ Sbjct: 60 NIATSVKDNRAVNHFKEIAKELEIVIPISFFERAVNTTFNSLVVIDADGSVMDTYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF---- 172 P+ + EK F G + + R+G+ IC D W + + + GAE LF Sbjct: 120 PDGHCYEEKFYFTPGDTGFKVWDTAYGRIGVGICWDQWFPES-ARIMALMGAEILFYPTA 178 Query: 173 -------SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG--QDE--LIFDGASF 221 +++ P++ ++ G + +P++ N+VG QDE + F G+SF Sbjct: 179 IGSEPILPIDSQPHWQRCMQ-------GHAAANIIPLVASNRVGTEVQDESSMTFYGSSF 231 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSDDSASTMYIPL 269 ++ QM E + E+ D ++ W + D MY P+ Sbjct: 232 IAGPTGEIIKQMDRNKEGVIIAEFDLDEIREKRQSWG-IYRDRRPEMYKPI 281 >gi|42781141|ref|NP_978388.1| NAD synthetase [Bacillus cereus ATCC 10987] gi|81699870|sp|Q739R5|NADE_BACC1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|42737062|gb|AAS40996.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus ATCC 10987] Length = 272 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ + +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQNSLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|89891780|ref|ZP_01203282.1| NH(3) (glutamine) dependent NAD(+) synthetase [Flavobacteria bacterium BBFL7] gi|89515935|gb|EAS18600.1| NH(3) (glutamine) dependent NAD(+) synthetase [Flavobacteria bacterium BBFL7] Length = 262 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 39/251 (15%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V L+DY K N ++G+SGGIDSA+ +++ A+ V + +P + + A Sbjct: 11 VTWLKDYAIKANVKGYVVGVSGGIDSAVTSSLC--AMTGLEVLCVEMPI-HQHHDHVTRA 67 Query: 340 AACAKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 K L ++ D+ P+ D F M + N ++R+R L Sbjct: 68 QEHIKQLKSRFKNVTDVRSDLTPVFDT---FIENMPDIKDSALVDLTRGNTRARLRMTTL 124 Query: 392 MALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 + ++ T NK E VG+ T YGD +P+ DL K+ V+Q+ + N Sbjct: 125 YYHGGVNGLLVAGTGNKVEDFGVGFYTKYGDGGVDVSPIADLMKSHVYQIGKYVN----- 179 Query: 451 SGLGPLTEVIPPSILEKSPSAELR-PHQTDQESL-PPYPILDDIIKRIVENEESFINNDQ 508 +P SI++ +PS L +TD++ + Y L+ ++ NE I N + Sbjct: 180 ---------VPESIMDAAPSDGLYGAERTDEDQIGASYDELE-----LIMNE---ITNGK 222 Query: 509 EYNDETVRYVE 519 + +D T R +E Sbjct: 223 KESDFTGRMLE 233 >gi|268323517|emb|CBH37105.1| conserved hypothetical protein containing carbon-nitrogen hydrolase domain [uncultured archaeon] Length = 248 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 19/230 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +K +AQ+ + DI N+A + A++ +D++ F E I+GY + F Sbjct: 10 IKIMKAGVAQV-KLYNDIDANLATISKYISLASKADIDILCFPECNITGYVRD---FSNV 65 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ ++ + ++VG P ++ NS ++L + KINL + Sbjct: 66 NQNEVMDTLNNIQEQVTENCVNVIVGAPYLERNKRFNSAIVLLTSGTRDIYHKINLTSSD 125 Query: 122 EFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKH-LKKQGAEFLFSLNASP 178 E K+ + P++FR D + G+LIC D +N + H K GA+ +F L+A Sbjct: 126 ETFFKKGEV------PLIFRVGDAKFGVLICRD--QNHPMLVHEYKTLGADAIFILSAHF 177 Query: 179 YYH----NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 Y K+ K + + +L ++ N VG +E I G S D Sbjct: 178 YAPIEAIRKINKNKALPIARAVENNLWVLKANAVGSSNEKISLGGSLIID 227 >gi|30262026|ref|NP_844403.1| NAD synthetase [Bacillus anthracis str. Ames] gi|47527295|ref|YP_018644.1| NAD synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184867|ref|YP_028119.1| NAD synthetase [Bacillus anthracis str. Sterne] gi|52143424|ref|YP_083405.1| NAD synthetase [Bacillus cereus E33L] gi|65319309|ref|ZP_00392268.1| COG0171: NAD synthase [Bacillus anthracis str. A2012] gi|118477447|ref|YP_894598.1| NAD synthetase [Bacillus thuringiensis str. Al Hakam] gi|165870279|ref|ZP_02214935.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0488] gi|167632891|ref|ZP_02391217.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0442] gi|167638405|ref|ZP_02396682.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0193] gi|170686454|ref|ZP_02877675.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0465] gi|170706130|ref|ZP_02896592.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0389] gi|177650844|ref|ZP_02933741.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0174] gi|190569202|ref|ZP_03022099.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis Tsiankovskii-I] gi|196036778|ref|ZP_03104168.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus W] gi|196047293|ref|ZP_03114508.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus 03BB108] gi|218903147|ref|YP_002450981.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH820] gi|222095639|ref|YP_002529696.1| nad synthetase [Bacillus cereus Q1] gi|227815179|ref|YP_002815188.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. CDC 684] gi|228945638|ref|ZP_04107988.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229091011|ref|ZP_04222235.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock3-42] gi|229196257|ref|ZP_04323005.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus m1293] gi|229603456|ref|YP_002866392.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0248] gi|254684591|ref|ZP_05148451.1| NAD synthetase [Bacillus anthracis str. CNEVA-9066] gi|254721349|ref|ZP_05183139.1| NAD synthetase [Bacillus anthracis str. A1055] gi|254734897|ref|ZP_05192609.1| NAD synthetase [Bacillus anthracis str. Western North America USA6153] gi|254741296|ref|ZP_05198984.1| NAD synthetase [Bacillus anthracis str. Kruger B] gi|254750848|ref|ZP_05202887.1| NAD synthetase [Bacillus anthracis str. Vollum] gi|254760088|ref|ZP_05212112.1| NAD synthetase [Bacillus anthracis str. Australia 94] gi|301053551|ref|YP_003791762.1| NAD(+) synthetase [Bacillus anthracis CI] gi|46396352|sp|Q81RP3|NADE_BACAN RecName: Full=NH(3)-dependent NAD(+) synthetase gi|81688329|sp|Q63CG2|NADE_BACCZ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030325|sp|A0RCZ8|NADE_BACAH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|226723162|sp|B7JKI8|NADE_BACC0 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766703|sp|C3P7H9|NADE_BACAA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766704|sp|C3L5J1|NADE_BACAC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766706|sp|B9IXY1|NADE_BACCQ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|30256652|gb|AAP25889.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. Ames] gi|47502443|gb|AAT31119.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178794|gb|AAT54170.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. Sterne] gi|51976893|gb|AAU18443.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus E33L] gi|118416672|gb|ABK85091.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis str. Al Hakam] gi|164714167|gb|EDR19688.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0488] gi|167513706|gb|EDR89075.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0193] gi|167531703|gb|EDR94368.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0442] gi|170129132|gb|EDS97997.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0389] gi|170669530|gb|EDT20272.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0465] gi|172083305|gb|EDT68366.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0174] gi|190559703|gb|EDV13691.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis Tsiankovskii-I] gi|195990581|gb|EDX54559.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus W] gi|196021918|gb|EDX60610.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus 03BB108] gi|218537909|gb|ACK90307.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH820] gi|221239697|gb|ACM12407.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Q1] gi|227005235|gb|ACP14978.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. CDC 684] gi|228587111|gb|EEK45181.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus m1293] gi|228692412|gb|EEL46147.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock3-42] gi|228814156|gb|EEM60427.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229267864|gb|ACQ49501.1| NH(3)-dependent NAD(+) synthetase [Bacillus anthracis str. A0248] gi|300375720|gb|ADK04624.1| NAD(+) synthetase [Bacillus cereus biovar anthracis str. CI] gi|324326055|gb|ADY21315.1| NAD synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 272 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|22202733|dbj|BAC07390.1| putative NAD synthetase [Oryza sativa Japonica Group] gi|125557363|gb|EAZ02899.1| hypothetical protein OsI_25032 [Oryza sativa Indica Group] gi|125599239|gb|EAZ38815.1| hypothetical protein OsJ_23220 [Oryza sativa Japonica Group] Length = 735 Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 120/595 (20%), Positives = 204/595 (34%), Gaps = 123/595 (20%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L++A LN D N+ + + A G + + EL ++GY ED ++ Sbjct: 1 MRLLRVATCNLNQWAMDFDTNLRNVKESIARAKAAGAAVRVGPELELTGYGCEDHFLEQD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + S + G +G P + N V I+ +R KI+L N Sbjct: 61 TAAHAWECLKDILSGGYTDGILCSIGMPVIFKSVRYNCQVFCLNSKIVMIRPKISLANDG 120 Query: 122 EFHEKRTFISGYSNDPIV-------------------------FRDIRLGILICEDIWKN 156 + E R F + D +V F D+ L CE+++ Sbjct: 121 NYREFRWFSAWTFKDALVDFQLPLDISEVTSQDTVPFGYGFIQFLDVSLASETCEELFTA 180 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 + L G E + + S + KL R + + +Y NQ G ++ Sbjct: 181 NAPRIDLALNGVEVFVNASGSHHQLRKLSLRIDSMRNATLACGGVYMYANQQGCDGGRLY 240 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF----------------MTEWHYDQQLS-------- 252 C + Q FS ++ + + +Q S Sbjct: 241 YDGCCCIAVNGDVVAQGSQFSLKDVEVLDALVDLDAVSSYRASVSSFREQASHRTKVPFV 300 Query: 253 ----------QWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 Q + MY +EE A +C L DY++++ ++ LSGG Sbjct: 301 KVPYKLCKPFQSGMVPTGPVEVMYHRPEEEIAFGPSCW--LWDYLRRSRASGFLLPLSGG 358 Query: 303 IDSALCAAIA-------------------VDA-----------------LGKENVQTIML 326 DS+ AAI DA L K T+ + Sbjct: 359 ADSSSVAAIVGCMCQLVVKDIENGDEQVKADAMRIGQYKDGEFPKDSRELAKRLFYTVYM 418 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SG 376 + +S + A A+ +G + +PI +V+ SL + + P Sbjct: 419 GTENSSEGTRSRAKMLAEEIGSFHLDVPIDSIVSALLSLFERLTGKRPRYKVDGGSNTEN 478 Query: 377 IVAENIQSRIRGNILMALSN-----HSKA---MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +NIQ+RIR + +++ H+K+ ++L +SN E GY T Y S NP Sbjct: 479 LGLQNIQARIRMVLAFMMASLMPWVHNKSGFYLVLGSSNVDEGLRGYLTKYDCSSADINP 538 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + + K + W H S L + E P P+AEL P + D L Sbjct: 539 IGSVSKQDLRAFLRWAAVHLHYSSLAEV-EAAP-------PTAELEPIRADYNQL 585 >gi|228927089|ref|ZP_04090154.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228933325|ref|ZP_04096181.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229121574|ref|ZP_04250801.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus 95/8201] gi|228662038|gb|EEL17651.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus 95/8201] gi|228826486|gb|EEM72263.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228832596|gb|EEM78168.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 272 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|289450742|ref|YP_003474764.1| NAD+ synthase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185289|gb|ADC91714.1| NAD+ synthase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 747 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 7/147 (4%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALG--KENVQTIMLPYKYTSPQ 334 ++L + +++ ++G+SGG+DS L A A D LG + + + LP TS Q Sbjct: 376 AVALAERLRRLKATSAVLGISGGLDSTLSLLITARAFDMLGLPRRQIICLTLPGFGTSNQ 435 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 + ++A + +G + + I V F+ + L E G+ EN Q+R R ILM + Sbjct: 436 TYKNACELIETVGASFKEINIQAAVKQHFADID--LPEGDRGVTYENAQARERTQILMDI 493 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGD 421 +N ++ T + SE+++G+ T GD Sbjct: 494 ANMHNGPVIGTGDLSELALGWCTYNGD 520 >gi|325266958|ref|ZP_08133629.1| NAD+ synthetase [Kingella denitrificans ATCC 33394] gi|324981699|gb|EGC17340.1| NAD+ synthetase [Kingella denitrificans ATCC 33394] Length = 266 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 74/275 (26%), Positives = 116/275 (42%), Gaps = 46/275 (16%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQS 335 V LRDY + ++G+SGGIDSA LCA +D L + +P + P Sbjct: 13 VAWLRDYAVQARVKGFVVGVSGGIDSAVVSTLCARTGLDVL------CLNMPIR-QKPDQ 65 Query: 336 LEDAAACAKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRI 386 + AA L +Y D+ P + S P+ +A N ++R+ Sbjct: 66 FDRAAEHIYHLRRQYANVRAQTVDLTPTFEQFERSVGGKSSL---HPTQDLAFANTRARL 122 Query: 387 RGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R L + ++ T NK E VG+ T YGD +P+ DL+KTQV++LA + Sbjct: 123 RMTTLYYYGQLHQLLVAGTGNKVEDFGVGFFTKYGDGGVDISPIADLFKTQVYELAEHLD 182 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQ-TDQESL-PPYPILDDIIKRIVENEE-- 501 I P+I + P+ L + TD++ + YP L+ + + E Sbjct: 183 --------------IIPAIRQAVPTDGLWDQERTDEQQMGASYPELEWAMVQHASGAERT 228 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 F +QE D VR L +++K + PV T Sbjct: 229 QFQGREQEVFDIFVR----LNRAAQHKIQPIPVCT 259 >gi|184199815|ref|YP_001854022.1| NAD synthetase [Kocuria rhizophila DC2201] gi|183580045|dbj|BAG28516.1| NH(3)-dependent NAD(+) synthetase [Kocuria rhizophila DC2201] Length = 275 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 36/243 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT- 323 P + EA+ V L DY++ + ++G+SGG+DS L A +AV+ L ++ + Sbjct: 16 PQIDPEAEAARRVDFLCDYLRATHTRGFVLGISGGVDSTLAGRLAQLAVEKLREDEIPAE 75 Query: 324 ---IMLPYKYTSPQSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEEPS 375 + LPY+ Q ED A A A YDV P V+ F + + E+ S Sbjct: 76 FVAMRLPYRT---QQDEDDAQAALAFIEPDRVVTYDVAPA---VDGFEAAYAAATGEQLS 129 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 N ++R+R A+ +++ T + +E G+ T +GD PL L K Sbjct: 130 DFTRGNTKARVRMTAQYAVGGDHNLLVIGTDHAAESITGFFTKFGDGGADLLPLAGLNKR 189 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDD 491 Q QL + LG +++ K P+A+L P +TD++ L Y +DD Sbjct: 190 QNRQLLGY---------LGASEQLVG-----KVPTADLLNDNPGRTDEDELGLTYENIDD 235 Query: 492 IIK 494 ++ Sbjct: 236 YLE 238 >gi|118576529|ref|YP_876272.1| NH(3)-dependent NAD synthase [Cenarchaeum symbiosum A] gi|118195050|gb|ABK77968.1| NH(3)-dependent NAD synthase [Cenarchaeum symbiosum A] Length = 271 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 30/262 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAA 341 L + V ++ + +++GLSGG+DSA+ AA A L ++ +++P SP+S DA Sbjct: 33 LLEQVGQSGANGIVLGLSGGVDSAVAAAAAARVL-RDRTLALVMPDSDVSPESETVDALG 91 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 L Y +L I +V + S +L EP N+++R+R IL +N + Sbjct: 92 LVDRLRIGYKLLDISPIVRAY----SLYL--EPDERARGNLRARVRMCILYYYANLEGRL 145 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 ++ +KSE +GY T +GD + L L+K+QV ++A LG +P Sbjct: 146 VVGAGDKSERLLGYFTKFGDGASDVELLAGLFKSQVRKVAGH---------LG-----VP 191 Query: 462 PSILEKSPSAEL-RPHQTDQESLPPYPILDDI----IKRIVENEESFINNDQEYNDETVR 516 +I+ K S L H ++E Y +D I + R ++ E+ + D + D +R Sbjct: 192 GNIISKKSSPHLWSGHLAEKELGASYEEIDSILYCTLDRGMDTLEAAAHCDID-KDRALR 250 Query: 517 YVEHLLYGSEYKRRQAPVGTKI 538 +E ++ +R P G + Sbjct: 251 IME--MHRKSAHKRSPPAGAPV 270 >gi|332560251|ref|ZP_08414573.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides WS8N] gi|332277963|gb|EGJ23278.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides WS8N] Length = 514 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%) Query: 251 LSQW--NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 LS W + + +++ ++ EA V L +Y + +IG+SGG+DSAL Sbjct: 29 LSPWFAARLEEQVEKGLFLSPEDLEATGARLVEELVEYRTRTQVSTAVIGMSGGVDSALT 88 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 AA+ A G +V LP + ++ ACA ALG ++ L DL + + ++Q Sbjct: 89 AAL-FKAAGW-HVVGHTLPIEQDPTETDRGIEACA-ALGIEHRPL---DLSGAYEAALAQ 142 Query: 369 FLQ---------EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + E P+ N+++R+R L ++ ++ T N SE++ G+ TL+ Sbjct: 143 LGEFDPDLLSSDETPARTRRGNLRARLRMMTLYDQAHRLGGLVAGTDNFSELTAGFWTLH 202 Query: 420 GDMSGGFNPLKDLYKT-------QVFQL--ASWRNSHGITSGLG 454 GD+ G P++ L K+ + +++ A+WR T GLG Sbjct: 203 GDV-GDLAPVQSLLKSWEVPWLARAYRVPEATWRAMP--TDGLG 243 >gi|222056031|ref|YP_002538393.1| NAD+ synthetase [Geobacter sp. FRC-32] gi|221565320|gb|ACM21292.1| NAD+ synthetase [Geobacter sp. FRC-32] Length = 332 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 51/199 (25%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK----- 349 ++IG+SGGIDS++ AA+AV ALG+E V + +P ++++ ++ ++ + LG + Sbjct: 40 IVIGVSGGIDSSVTAALAVRALGRERVYALEMPERHSADETKTLSSMLIEHLGVESQHVN 99 Query: 350 -------------YD-----VLPIHD------------LVNHFFSLMSQFLQEEPSG--- 376 YD V+P + N+ F+L S Q E SG Sbjct: 100 ITGILEAVGFYQLYDDAVRMVVPEYGRGWKSKIVTSSVFENNGFNLPSLVAQSE-SGCTI 158 Query: 377 ------------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + A N + RIR I ++ + T N+ E G+ GD + Sbjct: 159 KKRLPLTPYLHIVAATNYKQRIRKMIEYYHADRLHYAVAGTPNRLEYDQGFFVKLGDGAA 218 Query: 425 GFNPLKDLYKTQVFQLASW 443 P+ LYK+QV+QLA + Sbjct: 219 DIKPIAHLYKSQVYQLAGY 237 >gi|28849201|dbj|BAC65148.1| glutamine-dependent NAD synthetase [Homo sapiens] Length = 706 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 126/606 (20%), Positives = 210/606 (34%), Gaps = 138/606 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N V+ I+ +R K+ L N Sbjct: 61 DTLLHSFQVLAALVESPVTQDIICDVGMPVMHRNVRYNCRVVFLNRKILLIRPKMALANE 120 Query: 121 SEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWK 155 + E R F + + +V D +G ICE++W Sbjct: 121 GNYRELRWFTPWSRSRHTEEYFLPRMIQDLTKQETVPFGDAVLVTWDTCIGSEICEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + + S + K R ++VT S + NQ G D L Sbjct: 181 PHSPHIDMGLDGVEIITNASGSHHVLRKANTRVDLVTMVTSKNGGIYLLANQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQM---------KHFSEQN----------- 240 +DG + F D + L + S +N Sbjct: 241 YYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRASPYPR 300 Query: 241 ----FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F H D + +W Y S +EE + AC L D+++++ Sbjct: 301 VKVDFALSCHEDLLAPISEPIEWKYHSP----------EEEISLGPACWLW--DFLRRSQ 348 Query: 292 FHKVIIGLSGGIDSALCAAI----------AVDALGKE---NVQTIMLPYKYTSPQSLED 338 ++ LSGG+DSA A + AV + +E +V+TI+ YT PQ D Sbjct: 349 QAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLADVRTIVNQISYT-PQDPRD 407 Query: 339 AAA-----------------CAKA------LGCKYDVLPIHDLVNHFFSLMSQFLQEEP- 374 C +A +G + L I V + S + P Sbjct: 408 LCGRILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDPAVKAVMGIFSLVTGKSPL 467 Query: 375 ---------SGIVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNKSEISVGYGT 417 + +N+Q+RIR + L + H ++L ++N E +GY T Sbjct: 468 FAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGVHGGLLVLGSANVDESLLGYLT 527 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 Y S NP+ + KT + + L + ++ P+ E P A+ + Q Sbjct: 528 KYDCSSADINPIGGISKTDLRAFVQFCIQRFQLPALQSI--LLAPATAELEPLADGQVSQ 585 Query: 478 TDQESL 483 TD+E + Sbjct: 586 TDEEDM 591 >gi|196039846|ref|ZP_03107150.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus NVH0597-99] gi|196029549|gb|EDX68152.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus NVH0597-99] Length = 272 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNKGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|300024840|ref|YP_003757451.1| N-carbamoylputrescine amidase [Hyphomicrobium denitrificans ATCC 51888] gi|299526661|gb|ADJ25130.1| N-carbamoylputrescine amidase [Hyphomicrobium denitrificans ATCC 51888] Length = 286 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 22/246 (8%) Query: 2 LKKLKIAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 + K I + + G D+ NIAK EA R+G +IL +ELF Y + Sbjct: 1 MSKRSITVGAIQTSYGHDLKTNIAKTEAFVREAARKGAQVILPSELFEGIYFCTRQDPKW 60 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + + LK + G I + F +D NS+ I DA G I+ V K + Sbjct: 61 FETAHPVNEHPCVLALKKLAKELGVVIPISFFEKDGPRYYNSIAIADADGEILGVYRKSH 120 Query: 117 LPNYSEFHEKRTFI---SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF- 172 +P+ + EK F +G+ F R+G+ IC D W + + + QGAE LF Sbjct: 121 IPDGPGYQEKYYFRPGDTGFKTWATKFG--RIGVGICWDQWYPES-ARAMVLQGAEILFY 177 Query: 173 --SLNASPY---YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCF 223 ++ + PY L+ + + +S+ +PI+ N++G +D + F G SF Sbjct: 178 PTAIGSEPYDAALDTHLQWQRAMQGHAVSNA-VPIVAANRIGLEDNDGVQQKFYGHSFIS 236 Query: 224 DGQQQL 229 D + +L Sbjct: 237 DHRGEL 242 >gi|167630388|ref|YP_001680887.1| hydrolase, carbon-nitrogen family, putative [Heliobacterium modesticaldum Ice1] gi|167593128|gb|ABZ84876.1| hydrolase, carbon-nitrogen family, putative [Heliobacterium modesticaldum Ice1] Length = 295 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 26/239 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPE-- 54 ++K+ +A Q++ D+ NIAKA + +A RQG +IL ELF + Y PE Sbjct: 1 MRKVTVAATQMS-CSWDVDANIAKAEKLVRKAARQGAQVILLQELFEAPYFCQTERPEHY 59 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRD 113 DL + +SA+ + + G + + F + NS+ ++DA G I+ V Sbjct: 60 DLATETE----NNSAVRHFQPIAKELGVVLPISFFEKKNNARYNSIAMIDADGEILGVYR 115 Query: 114 KINLPNYSEFHEKRTFISGYSNDPI-VFRDIRLGILICEDIW-KNSNICKHLKKQGAEFL 171 K ++P+ + EK F G + + R ++G+ IC D W + C L GAE L Sbjct: 116 KTHIPDGPGYEEKFYFNPGDTGFQVWTTRYGKIGVGICWDQWFPEAARCMAL--MGAEIL 173 Query: 172 F---SLNASPYYHNKLKKRHE--IVTGQISHVHLPIIYVNQVGGQ----DELIFDGASF 221 ++ + P K H + G +P++ N++G + E+ F G+SF Sbjct: 174 LYPTAIGSEPEEPGIDSKDHWQICMQGHAGANLVPLVASNRIGKETFSTSEIDFYGSSF 232 >gi|15595490|ref|NP_248984.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa PAO1] gi|107099274|ref|ZP_01363192.1| hypothetical protein PaerPA_01000286 [Pseudomonas aeruginosa PACS2] gi|116054020|ref|YP_788462.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa UCBPP-PA14] gi|218889033|ref|YP_002437897.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa LESB58] gi|254237474|ref|ZP_04930797.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa C3719] gi|254243390|ref|ZP_04936712.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa 2192] gi|296386785|ref|ZP_06876284.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa PAb1] gi|9946137|gb|AAG03682.1|AE004467_4 N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa PAO1] gi|115589241|gb|ABJ15256.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169405|gb|EAZ54916.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa C3719] gi|126196768|gb|EAZ60831.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa 2192] gi|218769256|emb|CAW25016.1| N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa LESB58] Length = 292 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 18/239 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDL 56 M + + +A Q+ D NIA+A + +A +G +IL ELF + Y P D Sbjct: 1 MTRNVTVAATQM-ACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + + ++ ++AI ++ + + + F + NS+ ++DA G + V K Sbjct: 60 LQLATTVEE-NAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKS 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ +HEK F G + + R R+G+ IC D W + + + GAE LF Sbjct: 119 HIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPES-ARSMALLGAELLFYP 177 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFD 224 ++ + P+ + + H + G +P++ N++G +++ + F G+SF D Sbjct: 178 TAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIAD 236 >gi|49481213|ref|YP_036158.1| NAD synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81396359|sp|Q6HJW8|NADE_BACHK RecName: Full=NH(3)-dependent NAD(+) synthetase gi|49332769|gb|AAT63415.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 272 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDLKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|301794067|emb|CBW36471.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae INV104] Length = 291 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVATIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFEHPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVAENTAIQHFKLLAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWNTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|300773804|ref|ZP_07083673.1| N-carbamoylputrescine amidase [Sphingobacterium spiritivorum ATCC 33861] gi|300759975|gb|EFK56802.1| N-carbamoylputrescine amidase [Sphingobacterium spiritivorum ATCC 33861] Length = 300 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 38/285 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K+K+ I Q++ D N+ KA EA +G ++ ELF S Y D+ + Sbjct: 10 MSKVKVGIVQMS-CEKDKQANLDKAIVKVREAAAKGAQIVCLQELFTSLYFC-DVEDYDN 67 Query: 62 FIQACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 F A S + D L + + G I+ + +G+ N+ ILDA G+ + K++ Sbjct: 68 FDLAESIPGPSTDALAAVAKELGVVIIASLFEKRTQGLYHNTTAILDADGSYLGKYRKMH 127 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIW--KNSNICKHLKKQGAEFLFS 173 +P+ F+EK F G + ++GILIC D W + S I + GAE LF Sbjct: 128 IPDDPAFYEKFYFTPGDLGYKVFSTKFGKIGILICWDQWYPEASRITALM---GAEILFY 184 Query: 174 LNASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDE--LIFD 217 A + ++ +++ H + G +P++ VN+VG + + + F Sbjct: 185 PTAIGWATDQDEETNTDQYNAWQTIQRSHAVANG------VPVVSVNRVGFEQDGAMKFW 238 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSD 259 G SF + Q +L + H E+ + E +Q W ++ D Sbjct: 239 GGSFAANAQGKLLYLASHDQEEVEVVELDLNQSDYFRKHWPFLRD 283 >gi|258654593|ref|YP_003203749.1| NAD synthetase [Nakamurella multipartita DSM 44233] gi|258557818|gb|ACV80760.1| NAD+ synthetase [Nakamurella multipartita DSM 44233] Length = 328 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 74/263 (28%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 E ++ LS+ Y+ H +++ LSGGIDS+L AA+AV ALG E V + +P + +S Sbjct: 16 EYEFERIRLSITSYLASVRRHGLVVALSGGIDSSLVAALAVRALGPERVFGLHMPERESS 75 Query: 333 PQSL----------------EDAAACAKALGC--KYD------------------VLPIH 356 ++L ED A +A G + D VLP Sbjct: 76 NETLAISQSVSDTFGIDSVVEDITAPLEAFGAYRRRDDAIRLVCPEYGPGFRSKIVLP-- 133 Query: 357 DLVNHFFSLMSQFLQEEPSG---------------IVAENIQSRIRGNILMALSNHSKAM 401 +V+ + + +PSG + A N + R+R ++ Sbjct: 134 SVVDSHQLRLYSVVVVDPSGLETSYRLSQNAYLGIVAATNFKQRVRKAFEYYHADRLNYA 193 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 T N+ E G+ GD + P+ LYK+QV+ LA LG +P Sbjct: 194 TSGTPNRLEYDQGFFVKLGDGAADIKPIAHLYKSQVYALAKH---------LG-----VP 239 Query: 462 PSILEKSPSAELRPHQTDQESLP 484 +++ RP TD SLP Sbjct: 240 KAVIA-------RPSTTDTYSLP 255 >gi|332837439|ref|XP_001174076.2| PREDICTED: glutamine-dependent NAD(+) synthetase isoform 1 [Pan troglodytes] Length = 707 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 131/617 (21%), Positives = 214/617 (34%), Gaps = 159/617 (25%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAG-NIIAVRDKINLPN 119 + + L VG P + N VI G I+ +R K+ L N Sbjct: 61 DTLLHSFEVLAALLESPVTQDIICDVGMPVMHRNVRYNCRVIFLTGRKILLIRPKMALAN 120 Query: 120 YSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIW 154 + E R F + + +V D +G ICE++W Sbjct: 121 EGNYRELRWFTPWSRSRHTEEYFLPRMIQDLTKQETVPFGDAVLVTWDTCIGSEICEELW 180 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DE 213 + + G E + + + S + K R ++VT S + NQ G D Sbjct: 181 TPHSPHIDMGLDGVEIITNASGSHHVLRKANTRVDLVTMVTSKNGGIYLLANQKGCDGDR 240 Query: 214 LIFDGAS--------------FCFDGQQQLAFQM---------KHFSEQN---------- 240 L +DG + F D + L + S +N Sbjct: 241 LYYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRASPYP 300 Query: 241 -----FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 F H D + +W Y S +EE + AC L D+++++ Sbjct: 301 RVKVDFALSCHEDLLAPISEPIEWKYHSP----------EEEISLGPACW--LWDFLRRS 348 Query: 291 NFHKVIIGLSGGIDSALCAAI----------AVDALGKE---NVQTIMLPYKYTSPQSLE 337 ++ LSGG+DSA A + AV + +E +V+TI+ YT PQ Sbjct: 349 QQAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLADVRTIVNQISYT-PQDPR 407 Query: 338 DAAA-----------------CAKA------LGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 D C +A +G + L I V + S + P Sbjct: 408 DLCGRILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDPAVKAVMGIFSLVTGKSP 467 Query: 375 ----------SGIVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNKSEISVGYG 416 + +N+Q+RIR + L + H ++L ++N E +GY Sbjct: 468 LFAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGVHGGLLVLGSANVDESLLGYL 527 Query: 417 TLYGDMSGGFNPLKDLYKT----------QVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 T Y S NP+ + KT Q FQL + ++ ++ P+ E Sbjct: 528 TKYDCSSADINPIGGISKTDLRVFVQFCIQRFQLPALQSI------------LLAPATAE 575 Query: 467 KSPSAELRPHQTDQESL 483 P A+ + QTD+E + Sbjct: 576 LEPLADGQVSQTDEEDM 592 >gi|206975204|ref|ZP_03236118.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus H3081.97] gi|217959496|ref|YP_002338048.1| NAD synthetase [Bacillus cereus AH187] gi|229138722|ref|ZP_04267303.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-ST26] gi|226723165|sp|B7HND7|NADE_BACC7 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|206746625|gb|EDZ58018.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus H3081.97] gi|217066339|gb|ACJ80589.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH187] gi|228644638|gb|EEL00889.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-ST26] Length = 272 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ + +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQNGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|304409183|ref|ZP_07390804.1| NAD+ synthetase [Shewanella baltica OS183] gi|307303186|ref|ZP_07582941.1| NAD+ synthetase [Shewanella baltica BA175] gi|304353004|gb|EFM17401.1| NAD+ synthetase [Shewanella baltica OS183] gi|306913546|gb|EFN43968.1| NAD+ synthetase [Shewanella baltica BA175] Length = 276 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 38/246 (15%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQ---- 322 E E + V ++ +++ +++G+SGG+DS+ LC +AVD+L KEN Q Sbjct: 16 EPEFEVQRRVAFIKTKLKEARSKALVLGISGGVDSSTAGRLCQ-LAVDSLNKENSQGGYQ 74 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE--PSGIV 378 + LPY+ + E AC K + +H V+ S L E P V Sbjct: 75 FIAVRLPYQIQKDEH-EAQLACQFIQPSKLVTVNVHQGVDGVHSATVAALAEAGLPLPDV 133 Query: 379 AE------NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 A+ N+++R+R L+ +++ T + +E G+ T +GD + PL L Sbjct: 134 AKVDFVKGNVKARMRMIAQYELAGLVGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGL 193 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPI 488 K QV QLA++ + P S++ K+P+A+L +P D+ +L Y Sbjct: 194 NKRQVRQLAAYLGA--------------PESLVHKAPTADLEDNKPLLEDEVALGLTYAQ 239 Query: 489 LDDIIK 494 +DD ++ Sbjct: 240 IDDFLE 245 >gi|157835806|pdb|2PZ8|A Chain A, Nad+ Synthetase From Bacillus Anthracis With Amp-Cpp And Mg2+ gi|157835807|pdb|2PZ8|B Chain B, Nad+ Synthetase From Bacillus Anthracis With Amp-Cpp And Mg2+ gi|157835808|pdb|2PZA|A Chain A, Nad+ Synthetase From Bacillus Anthracis With Amp + Ppi And Mg2+ gi|157835809|pdb|2PZA|B Chain B, Nad+ Synthetase From Bacillus Anthracis With Amp + Ppi And Mg2+ gi|157835810|pdb|2PZB|A Chain A, Nad+ Synthetase From Bacillus Anthracis gi|157835811|pdb|2PZB|B Chain B, Nad+ Synthetase From Bacillus Anthracis gi|157835812|pdb|2PZB|C Chain C, Nad+ Synthetase From Bacillus Anthracis gi|157835813|pdb|2PZB|D Chain D, Nad+ Synthetase From Bacillus Anthracis Length = 284 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|332295772|ref|YP_004437695.1| N-carbamoylputrescine amidase [Thermodesulfobium narugense DSM 14796] gi|332178875|gb|AEE14564.1| N-carbamoylputrescine amidase [Thermodesulfobium narugense DSM 14796] Length = 289 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 28/222 (12%) Query: 22 NIAKARRAREEANRQGMDLILFTELFIS-----GYPPE--DLVFKKSFIQACSSAIDTLK 74 NI ++ R +A D+I+F+ELF++ Y P+ DL F + S+ I + Sbjct: 19 NILQSERIISQARENNADIIVFSELFLNRYFCISYDPKNFDLAFDDN-----SNVIKIFQ 73 Query: 75 SDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG 132 + + IV + + +G+ NSV++ D G+I K+++P+ + EK F G Sbjct: 74 NLARNNNIAIVFPYFEKRSQGIYHNSVILFDKNGSIAGKYRKMHIPDDPGYFEKYYFTPG 133 Query: 133 -YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN--KLKKRHE 189 +PI ++GILIC D W + + +GA+ L A + N KL+++ + Sbjct: 134 DLGFEPITCSFGKIGILICWDQWF-PEAARIMALKGAQMLIYPTAIGFDPNDSKLEQKKQ 192 Query: 190 I---VTGQISHV---HLPIIYVNQVG----GQDELIFDGASF 221 + +T Q SH +P+I VN+VG + ++ F G SF Sbjct: 193 LDSWLTIQRSHAIANSIPVISVNRVGLESNNKQKIRFWGNSF 234 >gi|298293446|ref|YP_003695385.1| N-carbamoylputrescine amidase [Starkeya novella DSM 506] gi|296929957|gb|ADH90766.1| N-carbamoylputrescine amidase [Starkeya novella DSM 506] Length = 299 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 21/240 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L +A Q++ D+ GNIA+A EA +G LIL ELF + Y +D +++ Sbjct: 1 MRNLTVAATQMH-CDWDVEGNIARAEGLVREAAGRGAKLILLQELFETPYFCQDQLYE-- 57 Query: 62 FIQACS-----SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 F++ S + + + G + V F + NS+ ++DA G+I+ + K Sbjct: 58 FLELASPFEGNKLVAHFAALAKELGVVLPVSFFERAGNAAFNSLAMVDADGSILGLYRKS 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ + EK F G + + + R+G+ IC D W + + GAE L Sbjct: 118 HIPDGPGYTEKFYFSPGDTGFRVWDTAVGRIGVGICWDQW-FPECARAMALLGAEVLLYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQ-----DELIFDGASFCFD 224 ++ + P+ + H ++ G +P+I N++G + L F G+SF D Sbjct: 177 TAIGSEPHDASLDSSGHWQRVMQGHAGANLMPLIASNRIGTEAGRNGTSLTFYGSSFIAD 236 >gi|152985033|ref|YP_001345779.1| N-carbamoylputrescine amidase [Pseudomonas aeruginosa PA7] gi|150960191|gb|ABR82216.1| N-carbamoylputrescine amidase [Pseudomonas aeruginosa PA7] Length = 292 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 18/239 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDL 56 M + + +A Q+ D NIA+A + +A +G +IL ELF + Y P D Sbjct: 1 MSRNVTVAATQM-ACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + + ++ ++AI ++ + + + F + NS+ I+DA G+ + + K Sbjct: 60 LQLATTVEE-NAAIAHFQALARELQVVLPISFFERAGRARFNSIAIIDADGSNLGIYRKS 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ +HEK F G + + R R+G+ IC D W + + + GAE LF Sbjct: 119 HIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPES-ARSMALLGAELLFYP 177 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFD 224 ++ + P+ + + H + G +P++ N++G +++ + F G+SF D Sbjct: 178 TAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIAD 236 >gi|302533304|ref|ZP_07285646.1| N-carbamoylputrescine amidase [Streptomyces sp. C] gi|302442199|gb|EFL14015.1| N-carbamoylputrescine amidase [Streptomyces sp. C] Length = 266 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 22/228 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+ Q + +GD A N+ + A A + G L++ +E+F++GY DL Sbjct: 1 MPPLRTALLQSSGRLGDTAENLKRLDEAASRAAQGGAGLLVTSEMFLTGY-ALDLQEVPG 59 Query: 62 FIQ-ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + A + + G ++ G+P +D + V NS ++ D L NY Sbjct: 60 YAEPADGESAHAIAGIARRHGIAVLYGYPERDGDTVYNSAQLIGP-------DGARLANY 112 Query: 121 SEFH-----EKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKKQGAEFLF 172 + H E+ F G + P+V D +R+GI+IC D+ N+ H G + L Sbjct: 113 RKTHLFGCFEQDAFTPG--DTPVVQADLNGLRVGIMICYDVEFPENVRAH-ALAGTDLLL 169 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 A H ++V + + I YVN+ G + E F G S Sbjct: 170 VPTAQ--MHPFQFVAEQLVPVRAFENQMYIAYVNRTGPEGEFEFVGLS 215 >gi|291299976|ref|YP_003511254.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Stackebrandtia nassauensis DSM 44728] gi|290569196|gb|ADD42161.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Stackebrandtia nassauensis DSM 44728] Length = 273 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 7/211 (3%) Query: 15 VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLK 74 V G++ N A A+R G+ L++F ELF+ GY P + ++ L+ Sbjct: 20 VPGEVGDNARTAAALVRLAHRHGVRLLVFGELFLPGYHPPTWASPACDVDVDDERLEPLR 79 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS 134 D G ++VG + G + +++D AVRD + N E R F G Sbjct: 80 QAARDTGVTVLVGASVRSPGGRFIATLLVDPQG--AVRDVYHKQNLCGPDENRWFTPGTH 137 Query: 135 NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS-LNASPYYHNKLKKRHEIVTG 193 + F RLG+ IC D + +H + + + + Y +R + Sbjct: 138 GSTLSFDGWRLGLGICYD----ATFPEHARAAALDGCHAYVTGGAYVVGGEHRRDTYHSA 193 Query: 194 QISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + +++ + VGG F G S +D Sbjct: 194 RALDNTFYVVFADAVGGAAPWTFGGGSRVYD 224 >gi|228958310|ref|ZP_04120036.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801391|gb|EEM48282.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 272 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + GK + LPYK + Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGKVTFIAVRLPYKVQKDE- 88 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 89 -DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 148 GGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQELG 198 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 199 A-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|329121884|ref|ZP_08250499.1| carbon-nitrogen family hydrolase [Dialister micraerophilus DSM 19965] gi|327467822|gb|EGF13314.1| carbon-nitrogen family hydrolase [Dialister micraerophilus DSM 19965] Length = 263 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 20/227 (8%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +IA+ Q+N V+ D N KA+ E+A +Q +D+++ E++ G+ P++ + + Q Sbjct: 4 RIALLQMNVVMSDFKTNFDKAKHLIEKAAQQKVDIVVLPEMWNVGFFPKEKLHNLADYQG 63 Query: 66 CSSAIDTL-----KSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPN 119 +D L K H G + V D + + N ++ +G AV DKI+ Sbjct: 64 -QHTLDLLTQLAKKHQVHIIGGTVAV----TDGKYLYNRAYCINRSGECAAVYDKIH--R 116 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 +S E + F G + ++R GI C DI + + + L Q + LF + A P Sbjct: 117 FSPSGEHKQFERGKNPVSFTLGNLRAGIATCYDI-RFPELIRKLALQHIDILFVVAAWP- 174 Query: 180 YHNKLKKRHEIVTGQISHV--HLPIIYVNQVGGQDELIFDGASFCFD 224 L+K H + + + + + VNQVG E I G S D Sbjct: 175 ---NLRKNHWNILNRARAIENQIFVCAVNQVGKSGENILAGNSMLLD 218 >gi|152975301|ref|YP_001374818.1| NAD synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189030326|sp|A7GNW5|NADE_BACCN RecName: Full=NH(3)-dependent NAD(+) synthetase gi|152024053|gb|ABS21823.1| NAD+ synthetase [Bacillus cytotoxicus NVH 391-98] Length = 272 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 38/229 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DY++K ++G+SGG DS L A +AV+ + G + LPYK Q Sbjct: 30 LKDYLRKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGSAKFIAVRLPYKV---QK 86 Query: 336 LEDAAACAKAL-----GCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 ED A A +D+ P D N + L+ + L + G N+++R+R Sbjct: 87 DEDDAQLALQFIKPDHSVSFDIAPAVDAFSNQYKDLLGESLTDFNKG----NVKARVRMV 142 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A+ +++ T + +E G+ T YGD PL L K R + Sbjct: 143 TQYAIGGQQGLLVIGTDHAAEAVTGFFTKYGDGGADLLPLTGLTK---------RQGRAL 193 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 194 LQELGS-----DKRLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|68535544|ref|YP_250249.1| NAD synthetase [Corynebacterium jeikeium K411] gi|68263143|emb|CAI36631.1| NAD-synthetase [Corynebacterium jeikeium K411] Length = 316 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/272 (25%), Positives = 111/272 (40%), Gaps = 49/272 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQ----------------T 323 + DY+Q H +++G+SGG DS L +AVD L +EN Q Sbjct: 56 IADYMQATGVHALVLGISGGQDSTLAGRLCQLAVDRLNQENAQAEQSVQENTSHPYTFCA 115 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQ-EEPSGIVAEN 381 + LPY + + EDA + + V + I + S+ L + S N Sbjct: 116 VRLPYGTQADE--EDAQIALRFIAPSMGVTVNIKGATDESARATSEALGIAQVSDFNKGN 173 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 I++R R AL+ +++ T + +E G+ T +GD + PL L K Sbjct: 174 IKARERMIAQYALAGELGGLVVGTDHAAEAITGFYTKHGDGAADLVPLAGLTK------- 226 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIV 497 R + LG P S +K P+A+L RP D+E+L Y LDD ++ Sbjct: 227 --RQGAALLQHLG-----APESTWQKVPTADLEEDRPALPDEEALGVTYAQLDDYLES-- 277 Query: 498 ENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 N + + ++E L + S +KR Sbjct: 278 ------TNGAADIDPTVAEHIEKLWFRSRHKR 303 >gi|307166045|gb|EFN60322.1| Probable glutamine-dependent NAD(+) synthetase [Camponotus floridanus] Length = 746 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 122/607 (20%), Positives = 211/607 (34%), Gaps = 138/607 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A+ LN D GN + ++ +EA G EL I GY ED ++ Sbjct: 1 MGRTVTVAVCTLNQWAMDFDGNSRRILQSIQEAKDAGATYRSGPELEICGYSCEDHFYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + +L + I VG P + N V I+ +R K+ L Sbjct: 61 DTLLHSWEVLASLLKSSICENILIDVGMPVMHKNVTYNCRVAFLNRRILLIRPKMRLCED 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 + E R F ++G + P I RD LG ICE++W Sbjct: 121 GNYRESRWFSPWTKERTVEDYFLPRMISQVTGQTIVPFGDAVIATRDTCLGFEICEELWH 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 ++ + G E + + + S + K ++V ++ N G + Sbjct: 181 PASNHIPMSLDGVEIIANGSGSYFELRKAYVTVDLVKSATFKAGGCYMFSNLRGCDGGRL 240 Query: 216 F--DGASFCFDGQ-----QQLAFQMKHFSEQNFMTE------------------------ 244 + G+S +G +Q A + + F E Sbjct: 241 YFNGGSSITLNGNILNRGRQFALEDVEVTIATFDLEDIRNYRNSIRSRSHAAAASQSYPR 300 Query: 245 WHYDQQLSQWNYMS-----------------DDSASTMYIPLQEEEADYNACVLSLRDYV 287 D L+ N MS D + +Y +EE A AC L DY+ Sbjct: 301 VKIDFALTPENLMSNPPDRPLDGIQDIYDDEDGQSKLVYHTAEEEIAMAPACWL--WDYL 358 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIA-------VDALGKENVQ------------------ 322 +++ + LSGG+DS+ A I V+++ K + Q Sbjct: 359 RRSCQGGFFLPLSGGVDSSSSACIVYSMCEMIVESVSKGDTQVLADIRKIVGDCEYVPID 418 Query: 323 ----------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 T + + +S ++ AA A +G + + I ++ + Q + Sbjct: 419 PKQLCNTILVTCYMGTENSSAETKIRAAELASQIGSYHHGIVIDTAISAILGIFQQVTKL 478 Query: 373 EPS----------GIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVG 414 P + +N+Q+R+R +++ + +L L + N E G Sbjct: 479 TPKFKVQGGSPRENLALQNVQARLRMVIAYLFAQLMLWVRGRPGGLLVLGSGNVDEALRG 538 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQ-LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 Y T Y S NP+ + K + + L ++ HGI++ G ILE P+AEL Sbjct: 539 YLTKYDCSSADVNPIGGIAKNDLKRFLVYFKRKHGISALNG---------ILEAPPTAEL 589 Query: 474 RPHQTDQ 480 P Q Q Sbjct: 590 EPLQAGQ 596 >gi|228985126|ref|ZP_04145293.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774613|gb|EEM23012.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 272 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|325104650|ref|YP_004274304.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pedobacter saltans DSM 12145] gi|324973498|gb|ADY52482.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pedobacter saltans DSM 12145] Length = 292 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 33/262 (12%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF 58 M K +K+ + Q N + A N+ KA + A +G +I ELF S Y ED Sbjct: 1 MGKNVKVGLVQ-NTCTANKAENLQKAIESIRVAASKGAQIICLQELFTSLYFCDVEDYAN 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 + D L + + G I+ + +G+ N+ ILDA G+ + K++ Sbjct: 60 FDLAESIPGPSTDALSAVAKELGVVIIASLFEKRAQGLYHNTTAILDADGSYLGKYRKMH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIW--KNSNICKHLKKQGAEFLFS 173 +P+ F+EK F G + + ++G+LIC D W + S I + GAE LF Sbjct: 120 IPDDPAFYEKFYFTPGDLGYKVFQTKFAKIGVLICWDQWYPEASRITALM---GAEILFY 176 Query: 174 LNASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDE--LIFD 217 A + ++ +++ H + G +P++ VN+VG + + + F Sbjct: 177 PTAIGWATDQDEETNKDQYNAWQTIQRSHAVANG------VPVVSVNRVGFEQDGAMKFW 230 Query: 218 GASFCFDGQQQLAFQMKHFSEQ 239 G SF + Q +L + H +E+ Sbjct: 231 GGSFATNAQGKLLYLASHDNEE 252 >gi|312130268|ref|YP_003997608.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Leadbetterella byssophila DSM 17132] gi|311906814|gb|ADQ17255.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Leadbetterella byssophila DSM 17132] Length = 290 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 25/278 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+ I + Q++ D+ N KA +EA +G +I ELF S Y D+ + Sbjct: 1 MKKVNIGLVQMS-CSADVEANKQKAIAGIKEAAAKGAQIICLQELFTSLYFC-DVEDHSN 58 Query: 62 FIQACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 F S D L+ + G I+ + +G+ N+ +LDA G + K++ Sbjct: 59 FNLGESIPGPTTDLLQPLAKELGVVIIASLFEKRAQGLYHNTTAVLDADGTYLGKYRKMH 118 Query: 117 LPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ ++EK F G I + R+G+LIC D W + GAE LF Sbjct: 119 IPDDPGYYEKFYFTPGDLGYKIFETKFARIGVLICWDQW-YPEAARITSLMGAEILFYPT 177 Query: 176 A--------SPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDELIFDGASFCFD 224 A P + + E + Q SH L ++ VN+VG + + F G SF + Sbjct: 178 AIGWDMEEPDPVINQEQHDAWETI--QRSHAVANGLYVVSVNRVGIEAKQKFWGGSFIAN 235 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSD 259 +L F+ H E+ + E D+ + W Y+ D Sbjct: 236 PHGRLLFKASHDKEEVHVQEIDLDKTEYYRTTWPYLRD 273 >gi|41393551|ref|NP_060631.2| glutamine-dependent NAD(+) synthetase [Homo sapiens] gi|257051045|sp|Q6IA69|NADE_HUMAN RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing]; AltName: Full=NAD(+) synthetase Length = 706 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 127/606 (20%), Positives = 209/606 (34%), Gaps = 138/606 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R K+ L N Sbjct: 61 DTLLHSFQVLAALVESPVTQDIICDVGMPVMHRNVRYNCRVIFLNRKILLIRPKMALANE 120 Query: 121 SEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWK 155 + E R F + + +V D +G ICE++W Sbjct: 121 GNYRELRWFTPWSRSRHTEEYFLPRMIQDLTKQETVPFGDAVLVTWDTCIGSEICEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + + S K R ++VT S + NQ G D L Sbjct: 181 PHSPHIDMGLDGVEIITNASGSHQVLRKANTRVDLVTMVTSKNGGIYLLANQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQM---------KHFSEQN----------- 240 +DG + F D + L + S +N Sbjct: 241 YYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRASPYPR 300 Query: 241 ----FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F H D + +W Y S +EE + AC L D+++++ Sbjct: 301 VKVDFALSCHEDLLAPISEPIEWKYHSP----------EEEISLGPACWL--WDFLRRSQ 348 Query: 292 FHKVIIGLSGGIDSALCAAI----------AVDALGKE---NVQTIMLPYKYTSPQSLED 338 ++ LSGG+DSA A + AV + +E +V+TI+ YT PQ D Sbjct: 349 QAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLADVRTIVNQISYT-PQDPRD 407 Query: 339 AAA-----------------CAKA------LGCKYDVLPIHDLVNHFFSLMSQFLQEEP- 374 C +A +G + L I V + S + P Sbjct: 408 LCGRILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDPAVKAVMGIFSLVTGKSPL 467 Query: 375 ---------SGIVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNKSEISVGYGT 417 + +N+Q+RIR + L + H ++L ++N E +GY T Sbjct: 468 FAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGVHGGLLVLGSANVDESLLGYLT 527 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 Y S NP+ + KT + + L + ++ P+ E P A+ + Q Sbjct: 528 KYDCSSADINPIGGISKTDLRAFVQFCIQRFQLPALQSI--LLAPATAELEPLADGQVSQ 585 Query: 478 TDQESL 483 TD+E + Sbjct: 586 TDEEDM 591 >gi|317505357|ref|ZP_07963285.1| para-aminobenzoate synthase [Prevotella salivae DSM 15606] gi|315663571|gb|EFV03310.1| para-aminobenzoate synthase [Prevotella salivae DSM 15606] Length = 295 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 24/275 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 +KKLKI I Q + + D + N+ + +G +LI+ EL S Y ED+ Sbjct: 1 MKKLKIGILQQHNI-ADSSVNMQRLSHGIAHLASRGAELIVLQELHNSLYFCQVEDVNNF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKINL 117 + D + G IV + G+ + +VVI G I K+++ Sbjct: 60 DLAEPIPGPSTDFYGKLAKEHGVVIVSSLFEKRAPGLYHNTAVVIEKDGTIAGKYRKMHI 119 Query: 118 PNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ ++EK F G PI RLG+L+C D W + + QGAE L A Sbjct: 120 PDDPAYYEKFYFTPGDLGFHPINTSIGRLGVLVCWDQWY-PEAARLMALQGAEILIYPTA 178 Query: 177 SPYYHNKLKKRHE--------IVTGQISHVHLPIIYVNQVGGQDE-------LIFDGASF 221 Y + + E ++ G LP+I VN+VG +D+ + F G+SF Sbjct: 179 IGYESSDTSEEQERQREAWTTVMRGHAVANGLPVIAVNRVGHEDDPSGMTRGIEFWGSSF 238 Query: 222 CFDGQQQLAFQMKHFSEQNFMTE--WHYDQQLSQW 254 Q ++ ++ E+ + E H+ +Q+ +W Sbjct: 239 AAGPQGEMLYRASKSDEEVHIIEVDIHHSEQVRRW 273 >gi|332967711|gb|EGK06818.1| NAD+ synthetase [Kingella kingae ATCC 23330] Length = 263 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 39/271 (14%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQS 335 V L+DY Q + ++G+SGGIDSA LCA + L + +P + P Sbjct: 11 VAWLQDYAQCAHARGFVVGVSGGIDSAVVSTLCAQTDLPVL------CLNMPIR-QKPDQ 63 Query: 336 LEDAAACAKALGCKYDVLP--IHDLVNHF--FSLMSQFLQEEPSGIVA-ENIQSRIRGNI 390 + AA + L +Y + DL F F +Q +P+ +A N +SR+R Sbjct: 64 FDRAAKHIQTLCQQYANVQGLTVDLTPTFEQFEQTTQKSSLQPNHELAMANTRSRLRMTT 123 Query: 391 LMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 L + ++ T NK E VG+ T YGD +P+ DL KTQV+++A N Sbjct: 124 LYYYGQINGLLVAGTGNKVEDFGVGFFTKYGDGGVDISPIADLLKTQVYEIAQTLN---- 179 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRP-HQTDQESL-PPYPILDDIIKRIV--ENEESFIN 505 I +I + +P+ L +TD++ + YP L+ +++ E F Sbjct: 180 ----------IDAAIQQAAPTDGLWDGERTDEQQMGATYPELEWAMEQHAAGSTREQFSG 229 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 +QE D VR L +++K + PV T Sbjct: 230 REQEVFDIFVR----LNRATQHKIQPIPVCT 256 >gi|228914617|ref|ZP_04078226.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844936|gb|EEM89978.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 272 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ-- 322 P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + E Sbjct: 15 PVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAM 74 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|313891547|ref|ZP_07825157.1| hydrolase, carbon-nitrogen family [Dialister microaerophilus UPII 345-E] gi|313120006|gb|EFR43188.1| hydrolase, carbon-nitrogen family [Dialister microaerophilus UPII 345-E] Length = 263 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 20/227 (8%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +IA+ Q+N V+ D N KA+ E+A +Q +D+++ E++ G+ P++ + + Q Sbjct: 4 RIALLQMNVVMSDFKTNFDKAKHLIEKAAQQKVDIVVLPEMWNVGFFPKEKLHNLADYQG 63 Query: 66 CSSAIDTL-----KSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPN 119 ++ L K H G + V D + + N ++ +G AV DKI+ + Sbjct: 64 -QHTLNLLTQLAKKHQVHIIGGTVAV----TDGKYLYNRAYCINCSGECAAVYDKIHRFS 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 S HE+ F G + ++R+GI C DI + + + L Q + LF + A PY Sbjct: 119 PSGEHEQ--FERGKNPVSFTLGNLRVGIATCYDI-RFPELIRKLSLQHIDILFVVAAWPY 175 Query: 180 YHNKLKKRHEIVTGQISHV--HLPIIYVNQVGGQDELIFDGASFCFD 224 L+K H + + + + + VNQ G E I G S D Sbjct: 176 ----LRKNHWNILNRARAIENQIFVCAVNQAGKSGENILAGNSMLLD 218 >gi|115522606|ref|YP_779517.1| NAD synthetase [Rhodopseudomonas palustris BisA53] gi|115516553|gb|ABJ04537.1| NH(3)-dependent NAD(+) synthetase [Rhodopseudomonas palustris BisA53] Length = 345 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 53/224 (23%) Query: 271 EEEADYNACVLSLRDYV-QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 + EA+ V ++R V ++ ++GLSGGIDS++ A+ V ALG + V +++P Sbjct: 26 DAEAETARIVEAIRTQVLRRLKRRGAVLGLSGGIDSSVTVALCVRALGPDKVLALLMPEH 85 Query: 330 YTSPQSL----------------EDAAACAKALGC--KYDVLPIHDLVNHF--------- 362 + P SL ED A GC + D I +V F Sbjct: 86 DSDPDSLRLGRLMAETVGVEAVTEDIAPILAGAGCYQRRDAF-IRAVVPEFGPGWGCKVV 144 Query: 363 --------FSLMSQFLQEEPSG---------------IVAENIQSRIRGNILMALSNHSK 399 +S+ S +Q P G I A N++ R R + ++ Sbjct: 145 IANSLGASYSITSLVVQ-SPDGEQRKVRLPLDLYLGIIAATNMKQRTRKQVEYFHADRLN 203 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 + T N E G+ GD + F P+ LYK+QV+QLA + Sbjct: 204 FAVAGTPNLLEYDQGFFVKNGDGAADFKPIAHLYKSQVYQLADY 247 >gi|332020805|gb|EGI61203.1| Putative glutamine-dependent NAD(+) synthetase [Acromyrmex echinatior] Length = 800 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 122/607 (20%), Positives = 215/607 (35%), Gaps = 139/607 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A+ LN D GN + ++ +EA G EL I GY ED ++ Sbjct: 1 MGRTVTVAVCTLNQWAMDFDGNTRRILQSIQEAKDAGATYRSGPELEICGYSCEDHFYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + TL + I VG P + N + I+ +R K+ L Sbjct: 61 DTLLHSWEVLATLLKSSVCEDILIDVGMPVMHKNVTYNCRIAFLNRRILLIRPKMRLCED 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 + E R F ++G + P I RD +G ICE++W Sbjct: 121 GNYRETRWFSPWTKERTVEDYFLPRMISQLTGQTVVPFGDAIIATRDTCVGFEICEELWH 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 ++ + G E + + + S + K ++V ++ N G + Sbjct: 181 PASNHIPMSLDGVEIIANGSGSYFELRKAYITVDLVKSATFKAGGCYMFSNLRGCDGGRL 240 Query: 216 F--DGASFCFDGQ-----QQLAFQMKHFSEQNFMTE------------------------ 244 + G+S +G +Q A + + F E Sbjct: 241 YFNGGSSITLNGNILNRGRQFALEDVEVTIATFDLEDIRNYRNSIRSRSHAAATSPSYPR 300 Query: 245 WHYDQQLSQWNYMSD------DSASTMY-----------IPLQEEEADYNACVLSLRDYV 287 D L+ N +S+ D A +Y IP +EE A AC L DY+ Sbjct: 301 VKIDFALTPENLISNPPDRPLDGAQDVYGDNEHSSFMYHIP-EEEIAMAPACWLW--DYL 357 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIA-------VDALGKENVQ------------------ 322 +++ + LSGG+DSA A + V+++G+ + Q Sbjct: 358 RRSCQGGFFLPLSGGVDSASSACVVYSMCEMIVESVGRGDTQVLADIRKIVGDCEYVPVD 417 Query: 323 ----------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 T + + +S ++ AA A +G + + I ++ + Q + Sbjct: 418 PKQLCNTILVTCYMGTENSSTETKARAAELANQIGSYHHGIVIDTAISAILGIFQQVTKL 477 Query: 373 EPS----------GIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVG 414 P + +N+Q+R+R +++ + +L L + N E G Sbjct: 478 TPKFRVQGGSPRENLALQNVQARLRMVIAYLFAQLMLWVRGRPGGLLVLGSGNVDEALRG 537 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQ-LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 Y T Y S NP+ + K + + L +R HGI++ +IL+ P+AEL Sbjct: 538 YLTKYDCSSADINPIGGIAKNDLKKFLLYFRRKHGISA---------LDNILDAPPTAEL 588 Query: 474 RPHQTDQ 480 P Q Q Sbjct: 589 EPLQAGQ 595 >gi|146311360|ref|YP_001176434.1| NAD synthetase [Enterobacter sp. 638] gi|189030447|sp|A4W9K3|NADE_ENT38 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|145318236|gb|ABP60383.1| NH(3)-dependent NAD(+) synthetase [Enterobacter sp. 638] Length = 275 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 46/264 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y++ N+F K +++G+SGG DS L + A+ G E++Q + LPY + Sbjct: 30 LKSYLKTNSFLKTLVLGISGGQDSTLAGKLCQQAISELRQETGDESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN S+++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IHPDRVLTVNIKGSVLASEQALREAGLELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ +K +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTKGVVVGTDHAAEAVTGFFTKYGDGGTDINPLFRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 + LG P + K+P+A+L + D+ SLP L EN + ++ Sbjct: 196 ---LAALG-----CPEHLYLKAPTADL---EDDRPSLPDEAAL----GVTYENIDDYLEG 240 Query: 507 DQEYNDETVRYVEHLLYGSEYKRR 530 + +D R +E +E+KRR Sbjct: 241 -KTLDDTIARTIEGWYLKTEHKRR 263 >gi|75759528|ref|ZP_00739617.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492959|gb|EAO56086.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 271 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 37/228 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + G + LPYK Q Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNATFIAVRLPYKV---QK 86 Query: 336 LEDAAACAKALG-----CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 ED A A +D+ D + + +L+ + L + G N+++RIR Sbjct: 87 DEDDAQLALQFSQADQSTAFDIASTVDAFSSYENLLGESLTDFNKG----NVKARIRMVT 142 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A+ +++ T + +E G+ T +GD PL L K R + Sbjct: 143 QYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALL 193 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 194 QELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 236 >gi|119961446|ref|YP_946327.1| NAD synthetase [Arthrobacter aurescens TC1] gi|119948305|gb|ABM07216.1| NAD+ synthetase [Arthrobacter aurescens TC1] Length = 273 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE----NVQTIMLPYKYTSPQS 335 L+DY++ + ++G+SGGIDS+L A +AV+ L E N + LPY + Sbjct: 31 LKDYLKATHTKGFVLGISGGIDSSLAGRLAQLAVEELEAEGMDANFVAVRLPYGIQHDE- 89 Query: 336 LEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA A + K + I V+ F + S N ++R R AL Sbjct: 90 -DDAQAALDFIKAKTEWTYNISQAVDGFEEEFEKTTGAPISDFHKGNTKARARMIAQYAL 148 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + +++ T + +E G+ T +GD PL L K R + + + LG Sbjct: 149 AGEHNYLVIGTDHGAESVTGFFTKFGDGGADILPLFGLNK---------RQNRALLAELG 199 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + EK P+A+L +P +TD++ L Y +DD ++ Sbjct: 200 A-----PSRVWEKVPTADLLDNKPGRTDEDELGITYDTIDDYLE 238 >gi|152976444|ref|YP_001375961.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025196|gb|ABS22966.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacillus cytotoxicus NVH 391-98] Length = 259 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V G++ N A + EEA + D+I+ EL+ +GY + L + K Sbjct: 1 MKVACIQMDIVFGEVTLNTEHAEKKIEEAMKVNPDVIVLPELWTTGYDLKRLPEISDKDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNY 120 Q + L + IV G +Q ++GV N++ I+D GN+ K++L + Sbjct: 61 KQ----TKEVLSKWAKEFSVNIVGGSVAKQTEKGVTNTMYIMDRQGNVQHEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +E + I+G+ +I+ G +IC DI I H K GA+ +F + P Sbjct: 115 QLMNEHKYLIAGHETGEFTLDEIQCGGVICYDIRFPEWIRVHTAK-GAKIVFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L+ ++ + ++ N+VG +F G S D Sbjct: 174 --RLEHWRLLLQARAIENQCYVVACNRVGKDPNNVFGGHSLIID 215 >gi|330954898|gb|EGH55158.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae Cit 7] Length = 264 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 23/226 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ D++GN+ + + + A QG +++ E+F+SGY + Sbjct: 1 MRVALYQCPPLPLDVSGNLTRLEQQAQVAAEQGAQVLICPEMFLSGYNIGAQAVGELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + N+V ++D+ L NY + Sbjct: 61 QDGPAATRIAAIAQASGIAILYGYPERAADRQIYNAVQLIDS-------QGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFAAGDDHYPVVELNGWRLGLLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 PY + + R H ++Y N G + + + G S Sbjct: 173 MLPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLS 213 >gi|221638227|ref|YP_002524489.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides KD131] gi|221159008|gb|ACL99987.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides KD131] Length = 514 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 23/221 (10%) Query: 251 LSQW--NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 LS W + + +++ ++ EA V L +Y + +IG+SGG+DSAL Sbjct: 29 LSPWFAARLEEQVEKGLFLSPEDLEATGARLVEELVEYRTRTQVSTAVIGMSGGVDSALT 88 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI----HDLVNHFFS 364 AA+ A G +V LP + ++ ACA ALG ++ L + + H Sbjct: 89 AAL-FKAAGW-HVVGHTLPIEQDPTETDRGIEACA-ALGIEHRPLDLSGAYEAALAHLGE 145 Query: 365 LMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 L L E P+ N+++R+R L ++ ++ T N SE++ G+ TL+GD+ Sbjct: 146 LDPDLLSSDETPARTRRGNLRARLRMMTLYDQAHRLGGLVAGTDNFSELTAGFWTLHGDV 205 Query: 423 SGGFNPLKDLYKT-------QVFQL--ASWRNSHGITSGLG 454 G P++ L K+ + +++ A+WR T GLG Sbjct: 206 -GDLAPVQSLLKSWEVPWLARAYRVPEATWRAMP--TDGLG 243 >gi|297571683|ref|YP_003697457.1| NAD+ synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296932030|gb|ADH92838.1| NAD+ synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 271 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 28/240 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSAL---CAAIAVDALGKENVQT----IMLPYKYTSPQS 335 L DY + ++G+SGG+DS L A +AV+ L E + LPY + ++ Sbjct: 29 LCDYARATKTKGFVLGISGGVDSTLGGRLAQLAVEKLRSEGYSATFIAVRLPYGVQADEA 88 Query: 336 LEDAAA-CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 AA K C + I D + F + + E + N+++R+R A+ Sbjct: 89 EAQAAVDWIKPDRCI--TINIQDATDAFHATYKNSMGEALTDFNKGNVKARMRMIAQFAI 146 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + +++ T + +E G+ T +GD + PL L K QV +A + LG Sbjct: 147 AGDNGLLVIGTDHAAENLTGFFTKFGDGAADILPLAHLNKRQVRSIAKY---------LG 197 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 P ++ EK P+A+L +P +TD++ L Y +DD ++ I + E+ N + ++ Sbjct: 198 A-----PQNLWEKIPTADLLDNKPQRTDEDELGVTYDDIDDFLEGIQISAEAQANLETKW 252 >gi|18401429|ref|NP_565650.1| NLP1 (NITRILASE-LIKE PROTEIN 1); N-carbamoylputrescine amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds [Arabidopsis thaliana] gi|20197650|gb|AAD15597.2| putative nitrilase [Arabidopsis thaliana] gi|21554187|gb|AAM63266.1| putative nitrilase [Arabidopsis thaliana] gi|222424030|dbj|BAH19976.1| AT2G27450 [Arabidopsis thaliana] gi|330252903|gb|AEC07997.1| N-carbamoylputrescine amidase [Arabidopsis thaliana] Length = 299 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 24/264 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKKSFIQACSSAIDTL 73 DI+ N+A A R EA+ +G ++IL ELF Y ED FK++ I + Sbjct: 22 DISTNVAAAERLVREAHAKGANIILIQELFEGYYFCQAQREDF-FKRAKPYKNHPTIARM 80 Query: 74 KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG 132 + + G I V F + NS+ I+DA G + + K ++P+ + EK F G Sbjct: 81 QKLAKELGVVIPVSFFEEANTAHYNSIAIIDADGTDLGIYRKSHIPDGPGYQEKFYFNPG 140 Query: 133 YSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRH 188 + + + ++G+ IC D W + + QGAE LF ++ + P + H Sbjct: 141 DTGFKVFQTKFAKIGVAICWDQW-FPEAARAMVLQGAEILFYPTAIGSEPQDQGLDSRDH 199 Query: 189 --EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASFCFDGQQQLAFQMKHFSE 238 ++ G +P++ N++G G ++ F G SF ++ + SE Sbjct: 200 WRRVMQGHAGANVVPLVASNRIGKEIIETEHGPSQITFYGTSFIAGPTGEIVAEADDKSE 259 Query: 239 QNFMTEWHYDQQLSQ---WNYMSD 259 + ++ D S+ W D Sbjct: 260 AVLVAQFDLDMIKSKRQSWGVFRD 283 >gi|328768271|gb|EGF78318.1| hypothetical protein BATDEDRAFT_17496 [Batrachochytrium dendrobatidis JAM81] Length = 699 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 129/606 (21%), Positives = 210/606 (34%), Gaps = 135/606 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN D +GN + + + ++A G L EL I GY D + Sbjct: 1 MPAYITLATCSLNQWALDFSGNYTRIQESIDQAKAAGACYRLGPELEIPGYGCNDHFLEA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPN 119 Q + L + + G VG P Q G+L N VI I+ +R K+ + N Sbjct: 61 DTHQHSWEVLAKLLENPQNVGITCDVGMPVM-QRGILYNCRVIFRDHTIVMIRPKMFMAN 119 Query: 120 YSEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIW 154 + E R F ++G ++ P + F D +G ICE+++ Sbjct: 120 DGNYREIRWFTPWSEYKKLDQLCLPKIISKLNGQTSAPFGDGVVAFSDAVIGTEICEELF 179 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL 214 + + G E + +AS + KL++R +++ +Y NQ G E Sbjct: 180 TPHSPHVQMSLDGVEIFTNGSASHHEFCKLEQRVQLIKSATEKCGGIYLYSNQKGCDGER 239 Query: 215 IF---------------DGASFCF-------------------DGQQQLAFQMKHFSEQN 240 ++ GA F G + Q E Sbjct: 240 VYYDGCPLIVLNGDVVAQGAQFSLAEVEVITATVDLDDVRAYRSGLVSRSLQAASIKEHF 299 Query: 241 FMTEWHYDQQLSQWNYMSDDS----ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 + H D L+ + + S S Y EE AC L DY+++ Sbjct: 300 PVV--HLDVCLTSESIFNGKSLAQPCSVKYHSPSEEIRLGPACW--LWDYLRRTQSGGYF 355 Query: 297 IGLSGGIDSALCAAIA----------VDALGKENVQTI------------MLPYKY---- 330 + LSGGIDS A I +D K+ +Q + M P K Sbjct: 356 LPLSGGIDSCSSALIVFSMCELVHARLDCSDKKVIQDLEAIVGASIDTSSMSPSKICGLL 415 Query: 331 ----------TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----- 375 +S + + AA AK +G + + I V+ + P Sbjct: 416 LHTCYMGTINSSNATRDRAAILAKRIGSWHLSINIDAGVDAIMGIFQLATGTSPKFHVHG 475 Query: 376 -----GIVAENIQSRIRGNILMALSN--------HSKAMLLTTSNKSEISVGYGTLYGDM 422 I +NIQ+R+R I + S ++L ++N E+ GY T Y Sbjct: 476 GSVRENIALQNIQARLRMVIAYLFAQLLPWTRDRRSSLLVLGSANVDEMLRGYLTKYDCS 535 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-----HQ 477 S NPL + K + + ++ L L+E + P+AEL P Q Sbjct: 536 SADLNPLGGISKVDLVEFV--KHMAESVPELDILSEFV-----SAPPTAELEPITLQHVQ 588 Query: 478 TDQESL 483 TD++ + Sbjct: 589 TDEDDM 594 >gi|168490261|ref|ZP_02714460.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae SP195] gi|183571380|gb|EDT91908.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae SP195] gi|332073254|gb|EGI83733.1| N-carbamoylputrescine amidase [Streptococcus pneumoniae GA17570] Length = 291 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVATIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFEHPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVAENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE F + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWNTRYAKIGIGICWDQW-FPETARCLALNGAELFFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|77918193|ref|YP_356008.1| amidohydrolase family protein [Pelobacter carbinolicus DSM 2380] gi|77544276|gb|ABA87838.1| predicted amidohydrolase family protein [Pelobacter carbinolicus DSM 2380] Length = 262 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 16/234 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA L PV GD+ GN + E A + G +L EL I GY D + Sbjct: 9 LRIAFLHLAPVAGDVGGNRNLLIKGMEAAAKLGAQWVLTPELCICGYSFADAIGTGWIEP 68 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVL-NSVVILDAGNIIAVRDKINL--PNY 120 + L + +G P R+ Q GVL NSV + G ++ KIN Sbjct: 69 QPDPWMAQLCQKAAALHMTLFLGQPEREPQSGVLFNSVFAVSEGRVVGRHRKINALRKGA 128 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA-SPY 179 + T + + P+ ++G++IC D + + +I LK QGA L S A +P Sbjct: 129 EAWSTPGTRATPFPVPPVG----KVGLMICGDAF-SPDIALGLKDQGARMLISSAAWAPG 183 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS--FCFDGQQQLAF 231 +H + LP++ N+ G L F A DG++ +F Sbjct: 184 FHGPAGEWERCT----RDTGLPLLVCNRSGADRNLDFRKAQSIVAKDGRRIWSF 233 >gi|167033802|ref|YP_001669033.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida GB-1] gi|166860290|gb|ABY98697.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida GB-1] Length = 247 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 11/235 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ QL + GD+ GN+ + E+A G +L++F EL ++GY P V +++ + Sbjct: 1 MKLCAVQLASLKGDLPGNLQRHLACIEQAAALGAELVVFPELSLTGYEPS--VARQAALP 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S+ +D L++ G I VG P +G+ + I G K L + Sbjct: 59 VASTRLDPLQAACDRLGITIAVGLPLPTPDGIRIGMPIFSPGAPRQAYAKRRLHD----D 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE-FLFSLNASPYYHNK 183 E F G + + R+ IC + ++ ++ GA+ +L S+ + Sbjct: 115 ELPYFTPGDQALLLEMGEHRVAPAICYESMFMAH-AAMAREHGADLYLVSVAKT---AKG 170 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 +++ H + +P++ N VG D I G S +D Q +L + SE Sbjct: 171 IREGHAHYPEVARELGMPVLMANCVGPADTFIGAGGSAAWDSQGRLLASLDEHSE 225 >gi|322376664|ref|ZP_08051157.1| N-carbamoylputrescine amidase [Streptococcus sp. M334] gi|321282471|gb|EFX59478.1| N-carbamoylputrescine amidase [Streptococcus sp. M334] Length = 291 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VF 58 ++ +++A Q+ D+ NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVAAIQMQ-CAKDVTTNIQTAERLVRQAAEQGAQIILLPELFERPYFCQERQYDYY 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + + A ++AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QHAQSVAENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYY-HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD------------ELIFDGAS 220 + + P + + G + +P+I N+ G ++ L F G+S Sbjct: 179 IGSEPILDKDSCGHWQRTMQGHAAANIVPVIAANRYGFEEVTPSEENGGQCSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|229155612|ref|ZP_04283720.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus ATCC 4342] gi|228627930|gb|EEK84649.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus ATCC 4342] Length = 272 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVTKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|238020488|ref|ZP_04600914.1| hypothetical protein GCWU000324_00370 [Kingella oralis ATCC 51147] gi|237867468|gb|EEP68474.1| hypothetical protein GCWU000324_00370 [Kingella oralis ATCC 51147] Length = 263 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 20/171 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQ---S 335 LRDY + ++G+SGGIDSA LCA A+ L + +P + Q + Sbjct: 14 LRDYAVQARAQGFVVGVSGGIDSAVVSTLCAQTALPTL------LLNMPIRQKIDQFDRA 67 Query: 336 LEDAAAC----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 E AA A A G D+ P + ++++ L+ + N +SR+R L Sbjct: 68 AEHIAALVAQYANARGETVDLTPTFEQFER--TVLTGSLKSPNQDLAMANTRSRLRMTAL 125 Query: 392 MALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 + ++ T NK E VG+ T YGD +P+ DL KTQV+ +A Sbjct: 126 YYYGQINGLLVAGTGNKVEDFGVGFFTKYGDGGVDISPIADLLKTQVYAIA 176 >gi|326333837|ref|ZP_08200070.1| NAD+ synthetase [Nocardioidaceae bacterium Broad-1] gi|325948419|gb|EGD40526.1| NAD+ synthetase [Nocardioidaceae bacterium Broad-1] Length = 338 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 51/222 (22%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 +EEA+ ++R Y+ N +++G+SGGIDS++ AA+AV ALG++ V + +P + Sbjct: 21 DEEAEATRIGDAIRRYLVANKRKGIVLGVSGGIDSSVVAALAVKALGRDRVFALHMPEQE 80 Query: 331 TSPQSLEDAAACAKALGCKY---DVLPI----------HDLVNHF--------------- 362 +S ++ + ++LG D+ P+ D + Sbjct: 81 SSDDTIGYSTKLTESLGIDSVLEDISPVLVGLGAYQRRDDAIRRVVPAYGPGWKSKIVLP 140 Query: 363 -------FSLMSQFLQEEPSG---------------IVAENIQSRIRGNILMALSNHSKA 400 F L S + E+P+G + A N + R R + ++ Sbjct: 141 SVVDSDAFRLFS-VVVEDPNGTQSTHRLTTEAYLEIVAATNFKQRARKALEYFHADRLNY 199 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 + T N+ E G+ GD + P+ LYK+QV+ +A+ Sbjct: 200 AVAGTPNRLEYDQGFFVKLGDGAADLKPIAHLYKSQVYAMAA 241 >gi|150016793|ref|YP_001309047.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium beijerinckii NCIMB 8052] gi|149903258|gb|ABR34091.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium beijerinckii NCIMB 8052] Length = 292 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 23/277 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 ++K+K+A Q++ +I NI+KA + EA +G +IL ELF + Y + Sbjct: 1 MRKVKVAATQMS-CSCNIDENISKAEKFVREAAGKGAQIILLQELFETPYFCQKEKSDYY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 V+ Q + AI+ K + + + F + N++ I+DA G I+ K Sbjct: 60 VYATEVAQ--NKAINHFKEIAKELKVVLPISFYEKKNYARYNAIAIIDANGEILGTYRKS 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ + EK F G + + R ++G+ IC D W + + GAE +F Sbjct: 118 HIPDGPGYEEKFYFNPGDTGFKVWNTRYGKIGVGICWDQW-YPEAARCMTLMGAEMIFYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDG 225 ++ + P + K H + G + +P+I N+VG +++ + F G+SF Sbjct: 177 TAIGSEPQDGSIDSKDHWQACMLGHAAANLVPVIASNRVGVEEDEDSKITFYGSSFIAGP 236 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSD 259 Q + E + E+ DQ Q +W D Sbjct: 237 QGNKLVEANRTEETVLVAEFDLDQLETQRIEWGIFRD 273 >gi|296282697|ref|ZP_06860695.1| hydrolase [Citromicrobium bathyomarinum JL354] Length = 283 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 13/231 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 ++++ +A QL D A N+ EEA +G +IL ELF Y ++ +F Sbjct: 1 MREITVAALQLELGAQDEAENVEAVSSLVEEAASRGAQVILPPELFDGPYFCKHEDEALF 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 ++ A + + G I F +D N++ ++ A G I+ V K ++ Sbjct: 61 ARAAPTAEHPNVRAMAKLAKKLGVAIPTSFFEKDGPHHYNTLAMIGADGEIMGVYRKSHI 120 Query: 118 PNYSEFHEKRTFISGYSNDPI--VFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 P+ + EK F G + + VF ++G+ +C D W + + GAE +F Sbjct: 121 PDGPGYEEKYYFRPGNTGFKVWDVF-GTKIGVGVCWDQWY-PETARAMALMGAELMFYPT 178 Query: 173 SLNASPY--YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 ++ + PY + + + G +P+I N++G +D F G SF Sbjct: 179 AIGSEPYDASFDTSRMWQRAMQGHSVSNCMPVIAANRIGTEDGQTFYGHSF 229 >gi|326919783|ref|XP_003206157.1| PREDICTED: glutamine-dependent NAD(+) synthetase-like [Meleagris gallopavo] Length = 707 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 129/611 (21%), Positives = 208/611 (34%), Gaps = 148/611 (24%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A LN D GN + R+ A +G L EL I GY D ++ Sbjct: 1 MGRAVSVAACALNQWALDFEGNAERILRSISIAKSKGARYRLGPELEICGYGCADHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R K++L N Sbjct: 61 DTLLHSFQVLAKLLESPATQDIICDVGMPLMHRNVRYNCRVIFLNKKILLIRPKMSLANA 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 + E R F ++G P + +D LG ICE++W Sbjct: 121 GNYRELRWFTPWNKARQVEEYLLPRIIQEVTGQDTVPFGDAVLATKDTCLGTEICEELWA 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 ++ + G E + + S + K R ++V + I NQ G D L Sbjct: 181 PNSPHIEMGLDGVEIFTNSSGSHHVLRKAHTRVDLVNSATAKNGGIYILSNQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQMKHFSEQNFMTEW-HYDQQLSQWN---- 255 +DG + F D + L + Q++ E + S+ N Sbjct: 241 YYDGCAMISINGETVAQGSQFSLDDVEVLVATLDLEDVQSYRAEISSRNLAASKVNPFPR 300 Query: 256 -------YMSDDSASTMYIPLQ------EEEADYN-ACVLSLRDYVQKNNFHKVIIGLSG 301 SDD A + +P+Q EEE AC L DY++++ ++ LSG Sbjct: 301 IKVNFALSCSDDLAVPICVPIQWKHHSPEEEICLGPACW--LWDYLRRSRQAGFLLPLSG 358 Query: 302 GIDSALCAAIAVD-------ALGKENVQ----------------------------TIML 326 GIDS+ A I A+ N + T + Sbjct: 359 GIDSSATACIVYSMCHQVCLAVKNGNAEVLADARRIVHDETYVPQDPREFCKLVFTTCYM 418 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------G 376 + +S + A A+ +G + L I V + S P Sbjct: 419 ASENSSQDTRNRAKLLAEQIGSYHINLNIDAAVKAIVGIFSLVTGRTPCFSVYGGSSREN 478 Query: 377 IVAENIQSRIR---GNILMALSNHSKAM-----LLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +N+Q+R+R + L+ ++ M +L ++N E GY T Y S NP Sbjct: 479 LALQNVQARVRMVLAYLFAQLTLWTRGMPGGLLVLGSANVDESLRGYLTKYDCSSADINP 538 Query: 429 LKDLYKTQV----------FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP--- 475 + + KT + FQL + R SI+ P+AEL P Sbjct: 539 IGGISKTDLKNFIQYCVENFQLTALR------------------SIMAAPPTAELEPLVD 580 Query: 476 ---HQTDQESL 483 QTD+ + Sbjct: 581 GQVSQTDEADM 591 >gi|50307329|ref|XP_453643.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642777|emb|CAH00739.1| KLLA0D13024p [Kluyveromyces lactis] Length = 714 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 126/599 (21%), Positives = 217/599 (36%), Gaps = 139/599 (23%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-----ED 55 M + + +A LN D GN + + + A +G L + EL I+GY ED Sbjct: 1 MSQLITVATCNLNQWALDFEGNRDRIFESIKIAKERGAKLRVGPELEITGYGCLDHFLED 60 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 VF S+ + I + +TH G + +G P + N ++ G I+ +R KI Sbjct: 61 DVFLHSW-EMYGQIIK--RPETH--GILLDIGMPVMHRNVRYNCRILSLDGKILFIRPKI 115 Query: 116 NLPNYSEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILIC 150 L N + E R F ++G P I D +G C Sbjct: 116 WLANDGNYREMRFFTPWMKAAHTEEYLLPPMIQKLTGQYRIPFGDAVISTLDTCIGAETC 175 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG 210 E+++ + + G E + + S + KL KR +++ +Y NQ G Sbjct: 176 EELFTPQSPHIAMSLDGVEIFTNSSGSHHELRKLDKRLDLIMSATRRCGGVYLYANQRGC 235 Query: 211 Q-DELIFDGAS--------------FCF----------DGQQQLAFQMKHFSE--QNFMT 243 D L +DG + FC D +Q +++ S Q +T Sbjct: 236 DGDRLYYDGCALICVNGSIVAQGSQFCLKDVEVVTATVDLEQVRSYRSTVMSRGLQASLT 295 Query: 244 EWHYDQQLSQWNYMS-DDSASTMYIPLQEEEADYN----------ACVLSLRDYVQKNNF 292 E + + + + DD + +P + +A Y+ AC L DY+++ N Sbjct: 296 ETKFKRIDVEVELATLDDRFDSTLVPEKPRKAFYHIPSEEIALGPACWLW--DYLRRCNG 353 Query: 293 HKVIIGLSGGIDSALCAAIA---------------------VDALGKEN----------- 320 + LSGGIDS A I V L + N Sbjct: 354 TGYFLPLSGGIDSCATAVIVHSMCRLVVKEAAEGNQQVIKDVRRLARMNDEWIPKTPQEL 413 Query: 321 ----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-- 374 T + + +S ++ A A+ +G + L + LV+ +L + P Sbjct: 414 ANKIFNTCFMGTENSSKETRSRAKKLAEHIGAYHVDLNMDSLVSSMVTLFEVTTGKRPIF 473 Query: 375 --------SGIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYG 416 + +NIQ+R+R + + ++ N ++L ++N E GY Sbjct: 474 KIFGGSQTENLALQNIQARLRMVLAYLFAQLLPWVRSIPNAGGLLVLGSANVDECLRGYL 533 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T Y S NP+ + KT + + ++ + P+ E L +P+AEL P Sbjct: 534 TKYDCSSADINPIGGISKTDLKKFIAYASKEFDL----PILE----EFLNATPTAELEP 584 >gi|104783589|ref|YP_610087.1| carbon-nitrogen hydrolase [Pseudomonas entomophila L48] gi|95112576|emb|CAK17304.1| putative carbon-nitrogen hydrolase [Pseudomonas entomophila L48] Length = 298 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 79/302 (26%), Positives = 122/302 (40%), Gaps = 51/302 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+IA Q+ D+A N+ +A + A QG +IL ELF + Y Sbjct: 1 MSTLRIATTQM-ACSWDLAANLERAEQLVRRAAAQGAQVILLQELFATPY---------F 50 Query: 62 FIQACSSAIDTLKSDTHDGG-----------AGIVVGFPRQDQEG--VLNSVVILDA-GN 107 I+ C S L D HD G+V+ ++ G NS+ + DA G+ Sbjct: 51 CIEQCHSH-QALAQDYHDSPLLKRFAALAKELGVVLPLSWYERAGNAFFNSLTVADADGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQ 166 ++ V K ++PN + EK F G + + RLGI IC D W + L Sbjct: 110 LLGVYRKTHIPNAIGYQEKEYFSPGDTGFKVWDTAFGRLGIGICWDQW-FPETARCLALM 168 Query: 167 GAEFLF---SLNASPYYHNKLKKRHE--IVTGQISHVHLPIIYVNQVGGQ-----DELI- 215 GAE L ++ + P + H + G + LP++ N+VG + D L Sbjct: 169 GAEVLLFPTAIGSEPGAAELDSRDHWQMAMRGHAAANLLPVVAANRVGHEVARTDDNLSM 228 Query: 216 -FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-------WNYMSDDSASTMYI 267 F G+SF D + M ++++ W +D L + W D S MY Sbjct: 229 RFYGSSFICDHKG----AMLQEADRDSSGVWLHDLDLERMREDRLTWGIYRDRRPS-MYA 283 Query: 268 PL 269 PL Sbjct: 284 PL 285 >gi|15639767|ref|NP_219217.1| NAD synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189026005|ref|YP_001933777.1| NAD synthetase [Treponema pallidum subsp. pallidum SS14] gi|8928217|sp|O83759|NADE_TREPA RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|3323089|gb|AAC65748.1| NH(3)-dependent NAD(+) synthetase (nadE) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018580|gb|ACD71198.1| NH(3)-dependent NAD(+) synthetase [Treponema pallidum subsp. pallidum SS14] Length = 679 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 22/227 (9%) Query: 293 HKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 ++++G+SGG+DSA I AL + + + LP T+ + A A+ALG Sbjct: 371 RRLVVGVSGGVDSACALLICARALDFLSIARTQLYALTLPGFGTTSGTKGAAQEFARALG 430 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 C + I V H + +Q+ EN Q+R R IL+ +N A+++ T + Sbjct: 431 CTVQEISISAAVTHHLHDIGHTMQQCDG--TYENAQARERTQILLDRANQLDALMIGTGD 488 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN---------SHGITSGLGPLTE 458 SE ++G+ T GD + L KT V L S+ + + G Sbjct: 489 ASEGALGWETFGGDHLSLYAVNASLPKTVVRALISYAGRVPERFVCETDSPYAPRGAAFS 548 Query: 459 VIPPSILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN 499 + +I+ + S EL P Q +E L PY + D + I N Sbjct: 549 RVCAAIVAQPVSPELIPPCDDRIVQCTEEMLGPYELHDFFLYHITVN 595 >gi|227539658|ref|ZP_03969707.1| N-carbamoylputrescine amidase [Sphingobacterium spiritivorum ATCC 33300] gi|227240571|gb|EEI90586.1| N-carbamoylputrescine amidase [Sphingobacterium spiritivorum ATCC 33300] Length = 300 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 38/285 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K+K+ I Q++ D N+ KA EA +G ++ ELF S Y D+ + Sbjct: 10 MSKVKVGIVQMS-CEKDKQANLDKAIVKVREAAAKGAQIVCLQELFTSLYFC-DVEDYDN 67 Query: 62 FIQACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 F A S + D L + G I+ + +G+ N+ ILDA G+ + K++ Sbjct: 68 FDLAESIPGPSTDALAVVAKELGVVIIASLFEKRTQGLYHNTTAILDADGSYLGKYRKMH 127 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIW--KNSNICKHLKKQGAEFLFS 173 +P+ F+EK F G + ++GILIC D W + S I + GAE LF Sbjct: 128 IPDDPAFYEKFYFTPGDLGYKVFSTKFGKIGILICWDQWYPEASRITALM---GAEILFY 184 Query: 174 LNASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDE--LIFD 217 A + ++ +++ H + G +P++ VN+VG + + + F Sbjct: 185 PTAIGWATDQDEETNTDQYNAWQTIQRSHAVANG------VPVVSVNRVGFEQDGAMKFW 238 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSD 259 G SF + Q +L + H E+ + E +Q W ++ D Sbjct: 239 GGSFVANAQGKLLYLASHDQEEVEVVELDLNQSDYFRKHWPFLRD 283 >gi|313609985|gb|EFR85360.1| carbon-nitrogen family hydrolase [Listeria monocytogenes FSL F2-208] Length = 296 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 24/206 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + EA+++G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIKYIREAHKKGADLVLFPEMWSNGYAPPFEGAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I A S+ + TLK + GI + + ++ N+ +I+D Sbjct: 61 PLATGFGAERFKWLNEAIAADSAYVSTLKKLAKELQIGICATYLSKTEQKTQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F +R SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLERLLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR 187 +GAE + NA +P N+L R Sbjct: 177 LKGAEIILVPNACDINPARLNQLNSR 202 >gi|295133864|ref|YP_003584540.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Zunongwangia profunda SM-A87] gi|294981879|gb|ADF52344.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Zunongwangia profunda SM-A87] Length = 295 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 30/284 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M + IA+ QLN + + N+AK + ++A ++G +I EL+ S Y ++ Sbjct: 1 MSRTYYIAVIQLN-LNDNATNNLAKCKDWVKKAAKEGAQVICLPELYSSHYFCQSEDVDN 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRD 113 + SA +L + G I+V F + G+ NS I+D G+ + Sbjct: 60 FALAEPLYSTSFSAFSSLAKEL---GVVIIVPFFEKRMAGIYHNSAYIIDNDGSEAGLYR 116 Query: 114 KINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 K+++P+ F+EK F G I + ++G LIC D W + QGAE LF Sbjct: 117 KMHIPDDPHFYEKFYFTPGDLGFKTITTKVGQIGTLICWDQWY-PEAARLTALQGAEVLF 175 Query: 173 ---SLNASPYYHNK-----------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 ++ P NK + K H + G I V D + F G Sbjct: 176 YPTAIGWHPSEKNKYGDHQYGAWMNVMKGHAVANGTYVAAANRIGLEKYVPNTDGIEFWG 235 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSD 259 ASF Q ++ Q H E+ + E D Q W + D Sbjct: 236 ASFIAGPQGEILAQASHDKEEILIAEVDLDHQENVRQNWPFFRD 279 >gi|229172719|ref|ZP_04300276.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus MM3] gi|228610759|gb|EEK68024.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus MM3] Length = 272 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 29/244 (11%) Query: 264 TMYI-PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL--- 316 T+++ P+ + +A+ V L+DYV+K ++G+SGG DS L A +AV+ + Sbjct: 10 TLHVQPVIDPKAEIRKRVDFLKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNE 69 Query: 317 -GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEP 374 G + LPYK + +DA + + V I V+ F + L E Sbjct: 70 GGNATFIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNEYENVLGESL 127 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 + N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 128 TDFNKGNVKARIRMVTQYAIGGQHGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK 187 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG + K P+A+L +P Q D+ L Y LD Sbjct: 188 ---------RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGISYDQLD 233 Query: 491 DIIK 494 D ++ Sbjct: 234 DYLE 237 >gi|291060141|gb|ADD72876.1| probable glutamine-dependent NAD(+) synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 674 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 22/227 (9%) Query: 293 HKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 ++++G+SGG+DSA I AL + + + LP T+ + A A+ALG Sbjct: 366 RRLVVGVSGGVDSACALLICARALDFLSIARTQLYALTLPGFGTTSGTKGAAQEFARALG 425 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 C + I V H + +Q+ EN Q+R R IL+ +N A+++ T + Sbjct: 426 CTVQEISISAAVTHHLHDIGHTMQQCDG--TYENAQARERTQILLDRANQLDALMIGTGD 483 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN---------SHGITSGLGPLTE 458 SE ++G+ T GD + L KT V L S+ + + G Sbjct: 484 ASEGALGWETFGGDHLSLYAVNASLPKTVVRALISYAGRVPERFVCETDSPYAPRGAAFS 543 Query: 459 VIPPSILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN 499 + +I+ + S EL P Q +E L PY + D + I N Sbjct: 544 RVCAAIVAQPVSPELIPPCDDRIVQCTEEMLGPYELHDFFLYHITVN 590 >gi|255647785|gb|ACU24353.1| unknown [Glycine max] Length = 299 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 23/224 (10%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAID-----T 72 DI+ N+A A R A++QG ++IL ELF Y + ++ FIQ D Sbjct: 19 DISTNVATAERLVRAAHKQGANIILIQELFEGYYFCQ--AQREDFIQRAKPHKDHPTILR 76 Query: 73 LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFIS 131 ++ + G I V F + NS+ I+DA G + + K ++P+ + EK F Sbjct: 77 MQKLAKELGVVIPVSFFEEANNAHYNSIAIIDADGTDLGIYRKSHIPDGPGYEEKFYFNP 136 Query: 132 GYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKR 187 G + + + ++G+ IC D W + + QGAE LF ++ + P + + Sbjct: 137 GDTGFKVFQTKLAKIGVAICWDQW-FPEAARAMVLQGAEILFYPTAIGSEPQDGSIDSRD 195 Query: 188 H--EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 H ++ G +P++ N++G G+ E+ F G SF Sbjct: 196 HWKRVMQGHAGANLVPLVASNRIGKEIIETEHGKSEITFYGNSF 239 >gi|251796481|ref|YP_003011212.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paenibacillus sp. JDR-2] gi|247544107|gb|ACT01126.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paenibacillus sp. JDR-2] Length = 270 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 11/228 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ--GMDLILFTELFISGYPPEDLVF 58 M + L+IA+ Q+N VG N +K EEA Q D+I+F E++ +GY ++ Sbjct: 7 MTQPLRIALLQMNIEVGQPEANFSKLSSMLEEAASQPNKPDVIVFPEMWNTGYALTEITT 66 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILD-AGNIIAVRDKIN 116 + A T S H G I+ G + +E GV N++ D GN I KI+ Sbjct: 67 LADPNGERTKAYLTEFSRKH--GIHIIAGSIAEGREDGVYNTIYAFDREGNQIGDYSKIH 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 L + E++ +G + G++IC DI + + + L GA+ LF Sbjct: 125 L--FRLMDEEKYLAAGDKLGKLEIEGAGAGMMICYDI-RFPELARKLALDGAKLLFVPAE 181 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P H +L ++T + + +I N+VG + F G S D Sbjct: 182 WP--HPRLHHWRTLLTARAIENQMFVIACNRVGISGDTHFFGHSMVLD 227 >gi|30020132|ref|NP_831763.1| NAD synthetase [Bacillus cereus ATCC 14579] gi|229043791|ref|ZP_04191490.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH676] gi|229109487|ref|ZP_04239079.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock1-15] gi|229127430|ref|ZP_04256424.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-Cer4] gi|229144639|ref|ZP_04273041.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-ST24] gi|296502615|ref|YP_003664315.1| NAD synthetase [Bacillus thuringiensis BMB171] gi|46396349|sp|Q81EI2|NADE_BACCR RecName: Full=NH(3)-dependent NAD(+) synthetase gi|29895682|gb|AAP08964.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus ATCC 14579] gi|228638879|gb|EEK95307.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-ST24] gi|228656049|gb|EEL11893.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-Cer4] gi|228673984|gb|EEL29236.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock1-15] gi|228725563|gb|EEL76821.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH676] gi|296323667|gb|ADH06595.1| NAD synthetase [Bacillus thuringiensis BMB171] Length = 272 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 24/222 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSLE 337 L+DYV+K ++G+SGG DS L A +AV+ + E NV I + Y + + Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNVTFIAVRLPYKVQKDED 89 Query: 338 DAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 90 DAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYAIGG 149 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 150 QKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQELGA- 199 Query: 457 TEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 200 ----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|302868747|ref|YP_003837384.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Micromonospora aurantiaca ATCC 27029] gi|302571606|gb|ADL47808.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Micromonospora aurantiaca ATCC 27029] Length = 281 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 21/233 (9%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + L +A Q PV GD+AGN A AR A +G +++ ELF+ Y P L Sbjct: 7 RPLTVAAVQAQPVPGDVAGNAGAA--ARLVARAEGARVVVLPELFLPAYHPPTLGADPDA 64 Query: 63 I--------QACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNIIAVR 112 + + +D L+S D GA +V+G + D+ ++S+V+ AG + A Sbjct: 65 TDVAADADGRVTDTRLDPLRSAAADAGAAVVIGAAVRHPDRRRTISSLVVDPAGTVTAAY 124 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 DK L +S E+ F +G I RLG+ +C D +H + + Sbjct: 125 DKQQL--WS--GERELFDAGRRGATIEVDTWRLGLGVCYD----GCFPEHARAAAGDGAH 176 Query: 173 S-LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 L S Y +R + + +++ N VGG D F+G + +D Sbjct: 177 GYLCPSGYLAGSAHRRDLYYAARALDNTMYVVFANSVGGTDPWRFNGGAAVYD 229 >gi|229096539|ref|ZP_04227510.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock3-29] gi|228686745|gb|EEL40652.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock3-29] Length = 272 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 30/225 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQ--TIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + E NV + LPYK Q Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNVTFIAVRLPYKV---QK 86 Query: 336 LEDAAACAKAL--GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 ED A A + I V+ F + L E + N+++RIR A Sbjct: 87 DEDDAQLALQFIQADQSTAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYA 146 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + +++ T + +E G+ T +GD PL L K R + L Sbjct: 147 IGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQEL 197 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 198 GA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|222081324|ref|YP_002540687.1| NAD synthetase [Agrobacterium radiobacter K84] gi|254766701|sp|B9JNG1|NADE_AGRRK RecName: Full=NH(3)-dependent NAD(+) synthetase gi|221726003|gb|ACM29092.1| NAD(+) synthase (glutamine-hydrolysing) protein [Agrobacterium radiobacter K84] Length = 332 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 52/221 (23%) Query: 274 ADYNACVLSLRDYVQ-KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 A+ + ++RD V+ K ++IGLSGG+DS++CAA+A ALG +NV I +P + Sbjct: 23 AEVDRIAQAMRDQVRNKMRRRGLVIGLSGGVDSSVCAALAAYALGAQNVFAIFMPENDSD 82 Query: 333 PQSL----------------EDAAACAKALGC-------------------KYDVLPIHD 357 P+SL ED + A+GC V+ Sbjct: 83 PESLSLGQEVAKAFSLEGAIEDIGSALAAMGCYERRDDFIRQVEPAYGSGWSCKVVISSP 142 Query: 358 LVNHFFSLMSQFLQEEPSG---------------IVAENIQSRIRGNILMALSNHSKAML 402 L ++L + LQ P G + A N++ R R + ++ + Sbjct: 143 LAGEGYALSTLVLQ-APDGSQTRHRMPASVYLGIVAATNMKQRTRKQMEYYHADRLNYAV 201 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 L T N+ E G+ GD + P+ LYK+QV+Q+A + Sbjct: 202 LGTPNRLEYDQGFFVKNGDGAADLKPIAHLYKSQVYQIAEY 242 >gi|16077382|ref|NP_388195.1| NAD synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221308125|ref|ZP_03589972.1| NAD synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221312449|ref|ZP_03594254.1| NAD synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317383|ref|ZP_03598677.1| NAD synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221321646|ref|ZP_03602940.1| NAD synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|321313983|ref|YP_004206270.1| NAD synthetase [Bacillus subtilis BSn5] gi|129288|sp|P08164|NADE_BACSU RecName: Full=NH(3)-dependent NAD(+) synthetase; AltName: Full=General stress protein 38; Short=GSP38; AltName: Full=Spore outgrowth factor B; AltName: Full=Sporulation protein outB gi|143279|gb|AAA22635.1| outB [Bacillus subtilis] gi|1805385|dbj|BAA08947.1| spore outgrowth factor B [Bacillus subtilis] gi|2632599|emb|CAB12107.1| ammonium-dependent NAD+ synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|291482702|dbj|BAI83777.1| NAD synthetase [Bacillus subtilis subsp. natto BEST195] gi|320020257|gb|ADV95243.1| NAD synthetase [Bacillus subtilis BSn5] Length = 272 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 30/225 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSLE 337 L+ YV+K ++G+SGG DS L A +AV+++ +E + Q I + + + Q + Sbjct: 30 LKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQQDED 89 Query: 338 DAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DA K + K+D I V+ F Q ++ + N+++R R A Sbjct: 90 DAQLALKFIKPDKSWKFD---IKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYA 146 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + ++L T + +E G+ T YGD PL L K R + L Sbjct: 147 IGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTK---------RQGRTLLKEL 197 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G P + K P+A+L +P Q+D+ L Y +DD ++ Sbjct: 198 GA-----PERLYLKEPTADLLDEKPQQSDETELGISYDEIDDYLE 237 >gi|2392477|pdb|1NSY|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis gi|2392478|pdb|1NSY|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis gi|4389117|pdb|2NSY|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis In Complex With Nad-Adenylate gi|4389118|pdb|2NSY|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis In Complex With Nad-Adenylate gi|14488432|pdb|1EE1|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis Complexed With One Molecule Atp, Two Molecules Deamido-Nad+ And One Mg2+ Ion gi|14488433|pdb|1EE1|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis Complexed With One Molecule Atp, Two Molecules Deamido-Nad+ And One Mg2+ Ion gi|14488453|pdb|1FYD|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis Complexed With One Molecule Amp, One Pyrophosphate Ion And One Mg2+ Ion gi|14488454|pdb|1FYD|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis Complexed With One Molecule Amp, One Pyrophosphate Ion And One Mg2+ Ion gi|14488548|pdb|1IFX|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis Complexed With Two Molecules Deamido-Nad gi|14488549|pdb|1IFX|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis Complexed With Two Molecules Deamido-Nad gi|14488550|pdb|1IH8|A Chain A, Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis Complexed With Amp-Cpp And Mg2+ Ions. gi|14488551|pdb|1IH8|B Chain B, Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis Complexed With Amp-Cpp And Mg2+ Ions. gi|227968200|pdb|1KQP|A Chain A, Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis At 1 A Resolution gi|227968201|pdb|1KQP|B Chain B, Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis At 1 A Resolution Length = 271 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 30/225 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSLE 337 L+ YV+K ++G+SGG DS L A +AV+++ +E + Q I + + + Q + Sbjct: 29 LKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQQDED 88 Query: 338 DAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DA K + K+D I V+ F Q ++ + N+++R R A Sbjct: 89 DAQLALKFIKPDKSWKFD---IKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYA 145 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + ++L T + +E G+ T YGD PL L K R + L Sbjct: 146 IGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTK---------RQGRTLLKEL 196 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G P + K P+A+L +P Q+D+ L Y +DD ++ Sbjct: 197 GA-----PERLYLKEPTADLLDEKPQQSDETELGISYDEIDDYLE 236 >gi|195134147|ref|XP_002011499.1| GI14143 [Drosophila mojavensis] gi|193912122|gb|EDW10989.1| GI14143 [Drosophila mojavensis] Length = 783 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 124/607 (20%), Positives = 220/607 (36%), Gaps = 139/607 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A+ LN D GN+A+ ++ EA G EL + GY ED F++ Sbjct: 1 MGRKITVAVTTLNQWALDFEGNMARILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + + ++ + S + VG P Q N + ++ +R K+ + Sbjct: 60 PDTFLHSWETFLEIMMS-PFCANMLVDVGMPVMHQNVAYNCRIAFFNRKLLLIRPKMAMC 118 Query: 119 NYSEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDI 153 + + E R F + + + I D +G ICE++ Sbjct: 119 DDGNYRESRWFTAWTKAQKTEEYLLPHLIKEQTGQETVPFGDAVIATPDTCIGYEICEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH---EIVTGQISHVHLPIIYVNQVGG 210 W + + G E + +N S Y +L+K H +++ ++ N G Sbjct: 179 WNVRSKHVEMSLSGVEII--VNGSGSYM-ELRKAHITNDLICNASFKAGGAYLFSNLRGC 235 Query: 211 QDELI-FDGAS-FCFDGQ-----QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAS 263 + + F+G S +G +Q A Q + E ++S + S + + Sbjct: 236 DGQRVYFNGCSAIALNGDVLARGKQFALQDVEVTLATIDLEEIRAYRVSLRSRCSSAAGA 295 Query: 264 TMYIPLQ--------------------------EEEADYN-ACVLSLRDYVQKNNFHKVI 296 +Y ++ EEE + AC L DY++++ Sbjct: 296 VVYPRIRCDFEMSTHNDIFKTATPALHFTYSSPEEEIELGPACWL--WDYLRRSGQGGFF 353 Query: 297 IGLSGGIDSALCAAIAV-------------DALGKENVQTIMLPYKYT------------ 331 + LSGG+DS+ A I DA +++ I+ YT Sbjct: 354 LPLSGGVDSSSSATIVYSMCRQIVQAVQHGDAQVLYDIRKILADSDYTPINAAALCNRLL 413 Query: 332 ----------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP------- 374 S ++ AA A +G + + I VN + + P Sbjct: 414 VTCYMGSVNSSKETRRRAAQLANQIGSYHIEISIDLAVNALLGIFNAVTGLTPVFRTQGG 473 Query: 375 ---SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMS 423 + +NIQSRIR +++ + N +L L +SN E GY T Y S Sbjct: 474 CARQNLALQNIQSRIRMVLAYIFAQLMLWVRNRPGGLLVLGSSNVDESLRGYLTKYDCSS 533 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------H 476 NP+ + KT + + S+ + L SI++ P+AEL P Sbjct: 534 ADINPIGGISKTDLLRFLSYAKKKYNLTAL--------ESIIDAPPTAELEPLLENGQLL 585 Query: 477 QTDQESL 483 QTD+E + Sbjct: 586 QTDEEDM 592 >gi|228939162|ref|ZP_04101756.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972040|ref|ZP_04132657.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978650|ref|ZP_04139022.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis Bt407] gi|228781090|gb|EEM29296.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis Bt407] gi|228787699|gb|EEM35661.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820531|gb|EEM66562.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939739|gb|AEA15635.1| NAD synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 272 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 24/222 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSLE 337 L+DYV+K ++G+SGG DS L A +AV+ + E NV I + Y + + Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNVTFIAVRLPYKVQKDED 89 Query: 338 DAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 90 DAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYAIGG 149 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 150 QKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQELGA- 199 Query: 457 TEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 200 ----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|229134844|ref|ZP_04263651.1| Carbon-nitrogen hydrolase [Bacillus cereus BDRD-ST196] gi|228648519|gb|EEL04547.1| Carbon-nitrogen hydrolase [Bacillus cereus BDRD-ST196] Length = 280 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+K+A Q++ V GD+ NI A++ EA ++ D+I+ EL+ +GY DL Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKKKISEAMKEKPDVIVLPELWTTGY---DLTRLSEI 76 Query: 63 IQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINL 117 A + ++T LK + G IV G +Q ++GV N++ V+ + GN++ K++L Sbjct: 77 --ADTDGLETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNNEGNLVNEYSKVHL 134 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + E + ++G D+ IC DI + H K GA+ LF + Sbjct: 135 --FQLMDEHKYLVAGNETGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEW 191 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L ++ + ++ N+ G F G S D Sbjct: 192 PLV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|218896981|ref|YP_002445392.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus G9842] gi|228900617|ref|ZP_04064838.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis IBL 4222] gi|228907748|ref|ZP_04071603.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis IBL 200] gi|226723163|sp|B7ITB1|NADE_BACC2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|218542708|gb|ACK95102.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus G9842] gi|228851916|gb|EEM96715.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis IBL 200] gi|228859036|gb|EEN03475.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis IBL 4222] Length = 272 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + G + LPYK Q Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNATFIAVRLPYKV---QK 86 Query: 336 LEDAAACAKAL--GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 ED A A + I V+ F + L E + N+++RIR A Sbjct: 87 DEDDAQLALQFIQADQSTAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYA 146 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + +++ T + +E G+ T +GD PL L K R + L Sbjct: 147 IGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQEL 197 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 198 GA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|260901058|ref|ZP_05909453.1| N-carbamoylputrescine amidase [Vibrio parahaemolyticus AQ4037] gi|308110703|gb|EFO48243.1| N-carbamoylputrescine amidase [Vibrio parahaemolyticus AQ4037] gi|328468842|gb|EGF39802.1| putative carbon-nitrogen hydrolase [Vibrio parahaemolyticus 10329] Length = 288 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 16/238 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M K +K A QL D+ N+AKA++A EA + G ++IL ELF + Y E Sbjct: 1 MSKVVKFAALQLTKSW-DLEENLAKAKKAIREAAQNGANVILPQELFAAPYFCKKQEAKY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + A S I + + + G I V + + NS+V++DA G ++ K + Sbjct: 60 FELAEETANSHLIQEMSALAKELGVVIPVSYFEKAGNTFFNSLVMIDADGTVLDNYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + + G IC D W + + L GAE +F Sbjct: 120 IPDGPGYSEKYYFSPGDTGFKVWQTKFGKFGAGICWDQW-FPELARSLALHGAEAIFYPT 178 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFD 224 ++ + P + H + G + +P+I N+VG + E F G+SF D Sbjct: 179 AIGSEPQDPTLDSRDHWQRTMQGHSAANLVPVIASNRVGTEVDDGIETTFYGSSFITD 236 >gi|315504782|ref|YP_004083669.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Micromonospora sp. L5] gi|315411401|gb|ADU09518.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Micromonospora sp. L5] Length = 281 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 21/233 (9%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + L +A Q PV GD+AGN A AR A +G +++ ELF+ Y P L Sbjct: 7 RPLTVAAVQAQPVPGDVAGNAGAA--ARLVARAEGARVVVLPELFLPAYHPPTLGADPDA 64 Query: 63 I--------QACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNIIAVR 112 + + +D L+S GA +V+G + D+ ++S+V+ AG + A Sbjct: 65 TDVAADADGRVTDARLDPLRSAAAAAGAAVVIGAAVRHPDRRRTISSLVVDPAGTVTAAY 124 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 DK L +S E+ F +G I RLG+ +C D +H + + Sbjct: 125 DKQQL--WS--GERELFDAGRRGATIEVDTWRLGLGVCYD----GCFPEHARAAAGDGAH 176 Query: 173 S-LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 L S Y +R + + +++ N VGG D F+G + +D Sbjct: 177 GYLCPSGYLAGSAHRRDLYYAARALDNTMYVVFANSVGGTDPWRFNGGAAVYD 229 >gi|228941186|ref|ZP_04103739.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228818345|gb|EEM64417.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 280 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K D H G I +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGVETKEKLIEWAKQYDVHIVGGSIA----KQTEQGVTNTMYVVNNEGQLVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 236 >gi|229102633|ref|ZP_04233336.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock3-28] gi|229115513|ref|ZP_04244919.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock1-3] gi|228667926|gb|EEL23362.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock1-3] gi|228680786|gb|EEL34960.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock3-28] Length = 272 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + G + LPYK Q Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNATFIAVRLPYKV---QK 86 Query: 336 LEDAAACAKAL--GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 ED A A + I V+ F + L E + N+++RIR A Sbjct: 87 DEDDAQLALQFIQADQSTAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYA 146 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + +++ T + +E G+ T +GD PL L K R + L Sbjct: 147 IGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQEL 197 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 198 GA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|121534325|ref|ZP_01666149.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosinus carboxydivorans Nor1] gi|121307095|gb|EAX48013.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosinus carboxydivorans Nor1] Length = 259 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 13/222 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q++ V+GD+ N KA E+ + G L + EL+ +GY + L+ K Sbjct: 1 MKVALLQMDIVLGDVEANRQKALAMLEQGAKAGAKLFVLPELWTTGYVLDQLL--KIGEP 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILD-AGNIIAVRDKINLPNYSE 122 + L+ D G IV G + ++G V N++ ++D AG ++ KI+L Sbjct: 59 DGGPTVKMLQQFAKDNGVEIVGGSIAEIRDGKVYNTIYVIDSAGEVVGKYSKIHL--VPM 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 E++ G + G ++C D+ + + + + L +GAE LF P Sbjct: 117 MDEEKYLTPGDRQGLFDLSFGKAGGIVCYDL-RFTELTRALALKGAEVLF----IPAEWP 171 Query: 183 KLKKRHEIVTGQISHV--HLPIIYVNQVGGQDELIFDGASFC 222 ++ RH ++ Q + + ++ VN+VG F G S Sbjct: 172 AIRGRHWLILSQARAIENQMFVVAVNRVGRDHNNTFFGHSLV 213 >gi|302527321|ref|ZP_07279663.1| predicted protein [Streptomyces sp. AA4] gi|302436216|gb|EFL08032.1| predicted protein [Streptomyces sp. AA4] Length = 267 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 12/268 (4%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +I QL P +GD+A N + R E G D+++ EL SGY E A Sbjct: 3 RIVCVQLAPRIGDVAANHRQIVRTIAETTAGGADILVLPELATSGYVFESAAEAADCAIA 62 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEFH 124 + + DGG+ +V G+ + +GVL NS V+ DA ++A K +L + Sbjct: 63 PGDPMIGEWAAAVDGGSVVVCGYAERGPDGVLYNSAVLFDATGVLAQYRKTHLWD----R 118 Query: 125 EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EK F G P+ R R+ +++C D+ + + + GA+ + P Sbjct: 119 EKLFFTPGSHPPPVAETRFGRIAVMVCYDL-EFPEYTRRVALDGADLIAVPTNWPEVPRP 177 Query: 184 LKKR-HEIVTGQISHV--HLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 + +R E++ Q + + I ++ G + + + D +A Sbjct: 178 VGERPPEVLLAQAAARVNRVAIACCDRSGTERGQRWTEGTTIVDQDGWIAAVAGADGRAQ 237 Query: 241 FMTEW--HYDQQLSQWNYMSDDSASTMY 266 + T+ D+ LS N++ DD + +Y Sbjct: 238 WDTDLAAARDKTLSPRNHLFDDRRTELY 265 >gi|228960301|ref|ZP_04121954.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799325|gb|EEM46289.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 280 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 15/226 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY DL Sbjct: 21 KMKVACIQMDIVFGDVEKNIENAKNKISEAVKERPDVIVLPELWTTGY---DLTRLSEI- 76 Query: 64 QACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 A ++T LK + G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 77 -ADRDGLETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNSTGEFKLDDVECAGAICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 236 >gi|228920729|ref|ZP_04084070.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229069572|ref|ZP_04202861.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus F65185] gi|229190127|ref|ZP_04317131.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus ATCC 10876] gi|228593350|gb|EEK51165.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus ATCC 10876] gi|228713711|gb|EEL65597.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus F65185] gi|228838947|gb|EEM84247.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 272 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + G + LPYK + Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNATFIAVRLPYKVQKDE- 88 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 89 -DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 148 GGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQELG 198 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 199 A-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|146279089|ref|YP_001169248.1| NAD+ synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145557330|gb|ABP71943.1| NAD+ synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 514 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 31/226 (13%) Query: 250 QLSQW--NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 +LS W +++ +++P ++ + V L +Y + + ++G+SGG+DSAL Sbjct: 28 ELSPWFAERLAEQVERGLFLPPRDLDLVGARLVQDLAEYRMQGSISTAVLGMSGGVDSAL 87 Query: 308 CAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH-DLVNHFFSLM 366 AA+ A G V + LP +P+ E +AL ++ +H DL + + + Sbjct: 88 TAAL-FKAAGW-RVVGLTLPID-QNPEETERGIEACEALRIEH----LHLDLSQAYRAAV 140 Query: 367 SQF---------LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 +Q E P+ N+++R+R L ++ ++ +T N SE+S G+ T Sbjct: 141 AQLGDLDGDLVASDEGPARTRRGNLRARLRMMTLYDQAHRLGGLVASTDNLSELSAGFWT 200 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI---------TSGLG 454 L+GD+ G P++ L K+ +++ +HG+ T GLG Sbjct: 201 LHGDV-GDLAPVQSLLKS--WEVPWLARAHGVPERTWRAMPTDGLG 243 >gi|325286908|ref|YP_004262698.1| NAD+ synthetase [Cellulophaga lytica DSM 7489] gi|324322362|gb|ADY29827.1| NAD+ synthetase [Cellulophaga lytica DSM 7489] Length = 262 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 23/180 (12%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTS 332 N V L+DY K N +IG+SGGIDSA LCA ++ L E +P Sbjct: 8 NHIVNWLKDYATKANIKGFVIGISGGIDSAVTSTLCAKTGLELLCLE------MPIHQAE 61 Query: 333 PQSLEDAAACAKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 Q + A+ L + ++ P+ D F + EE + N ++ Sbjct: 62 SQ-VTRASKHIDWLQSNFKNVKRQQVNLTPVFD---SFIDTLPSVTNEEERFLSLANARA 117 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 R+R L + ++ T NK E VG+ T YGD +P+ DL K++V+++A + Sbjct: 118 RLRMTTLYYFAGLHGYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVYEIAKF 177 >gi|224542279|ref|ZP_03682818.1| hypothetical protein CATMIT_01454 [Catenibacterium mitsuokai DSM 15897] gi|224524821|gb|EEF93926.1| hypothetical protein CATMIT_01454 [Catenibacterium mitsuokai DSM 15897] Length = 291 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 15/219 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VF 58 ++++K+A Q + D+ NI KA + EA ++IL ELF Y ++ + Sbjct: 1 MRQVKVAALQFS-CSKDVQENINKAEKMVREAADNDANIILLPELFERQYFCQEKRYDYY 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + + A++ K + G I V F +D + + N+V ++DA G+++ + K ++ Sbjct: 60 DYALPLEKNPAVNRFKEVAKELGVVIPVSFYERDIDRLFNTVAMIDADGSVLGIYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGIL---ICEDIWKNSNICKHLKKQGAEFLF-- 172 P+ + EK F G ++ + D R G + IC D W + + QGAE L Sbjct: 120 PDDHFYQEKFYFTPGDTSFKVF--DTRFGCIGVGICWDQW-FPETARCMAVQGAEMLLYP 176 Query: 173 -SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQVG 209 ++ + P N ++ G + +P++ N++G Sbjct: 177 TAIGSEPILDVNSSGHWRRVMQGHAAANLMPVVAANRIG 215 >gi|206972105|ref|ZP_03233053.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH1134] gi|218233156|ref|YP_002366717.1| NAD synthetase [Bacillus cereus B4264] gi|228952402|ref|ZP_04114487.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229150257|ref|ZP_04278478.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus m1550] gi|229178428|ref|ZP_04305796.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus 172560W] gi|226723164|sp|B7HJC1|NADE_BACC4 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|206733028|gb|EDZ50202.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH1134] gi|218161113|gb|ACK61105.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus B4264] gi|228605066|gb|EEK62519.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus 172560W] gi|228633229|gb|EEK89837.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus m1550] gi|228807288|gb|EEM53822.1| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 272 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + G + LPYK + Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNATFIAVRLPYKVQKDE- 88 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 89 -DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 148 GGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQELG 198 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 199 A-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|242048246|ref|XP_002461869.1| hypothetical protein SORBIDRAFT_02g009640 [Sorghum bicolor] gi|241925246|gb|EER98390.1| hypothetical protein SORBIDRAFT_02g009640 [Sorghum bicolor] Length = 732 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 121/595 (20%), Positives = 202/595 (33%), Gaps = 123/595 (20%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L++A LN D N+ + + A G + + EL ++GY ED ++ Sbjct: 1 MRLLRVATCNLNQWAMDFDTNLRNVKESIARAKAAGAAIRVGPELELTGYGCEDHFLEQD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + + +G P N V II +R K++L N Sbjct: 61 TTAHAWECLKDILTGNYTDNILCSIGMPVIFNSVRYNCQVFCLNRKIIMIRPKMSLANDG 120 Query: 122 EFHEKRTFISGYSNDPIV-------------------------FRDIRLGILICEDIWKN 156 + E R F + D IV F D+ L CE+++ Sbjct: 121 NYREFRWFSAWTFKDEIVDFQLPIEVSEAISQDTVPFGYGYMRFLDVSLAAETCEELFTA 180 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG------ 210 + L G E + + S + KL R + + +Y N G Sbjct: 181 NAPRIDLALNGVEVFMNASGSHHQLRKLNLRIDCIRNATQTCGGVYMYANHQGCDGGRLY 240 Query: 211 ---------QDELIFDGASFCF------------DGQQQLAFQMKHFSEQN-------FM 242 +LI G+ F D + F EQ F+ Sbjct: 241 YDGCCCIAVNGDLIAQGSQFSLKDVEVLDALVDLDAVSSYRASVSSFREQASHRKNVPFV 300 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + Q Q + +Y +EE A +C L DY++++ ++ LSGG Sbjct: 301 KVPYKLCQSFQSGMIPTSPVEIVYHCPEEEIAFGPSCWL--WDYLRRSQASGFLLPLSGG 358 Query: 303 IDSALCAAIA-------------------VDAL-----------------GKENVQTIML 326 DS+ AAI DAL K T+ + Sbjct: 359 ADSSSVAAIVGCMCQLVIKDIEKGDEQVKADALRIGHYKDGEIPTDSRELAKRLFYTVYM 418 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SG 376 + +S + A A+ +G + +PI +V+ F SL + P Sbjct: 419 GTENSSEDTRSRAKRLAEEIGSFHLNVPIDSIVSAFLSLFETLTGKRPRYKIDGGSNTEN 478 Query: 377 IVAENIQSRIRGNILMALSN-----HSKA---MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +NIQ+RIR + +++ H+K+ ++L +SN E GY T Y S NP Sbjct: 479 LGLQNIQARIRMVLAFMMASLMPWVHNKSGFYLVLGSSNVDEGLRGYLTKYDCSSADINP 538 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + + K + W H S L + E P P+AEL P + + L Sbjct: 539 IGSVSKQDLRAFLRWAAIHLKYSSLAEV-EAAP-------PTAELEPIRANYNQL 585 >gi|47566776|ref|ZP_00237494.1| NAD+ synthetase [Bacillus cereus G9241] gi|47556405|gb|EAL14738.1| NAD+ synthetase [Bacillus cereus G9241] Length = 261 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 28/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKEN 320 P+ + +A+ V L+DYV K ++G+SGG DS L A +AV+ + G Sbjct: 15 PVIDPKAEIRKRVDFLKDYVTKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPYK + +DA + + V I V+ F + L E + Sbjct: 75 FIAVRLPYKVQKDE--DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNK 132 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 133 GNVKARIRMVTQYAIGGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK----- 187 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 188 ----RQGRALLQELGA-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|229079202|ref|ZP_04211750.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock4-2] gi|228704128|gb|EEL56566.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock4-2] Length = 272 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + G + LPYK + Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNATFIAVRLPYKVQKDE- 88 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 89 -DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 148 GGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQELG 198 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 199 A-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|194017526|ref|ZP_03056137.1| NAD+ synthetase [Bacillus pumilus ATCC 7061] gi|194010798|gb|EDW20369.1| NAD+ synthetase [Bacillus pumilus ATCC 7061] Length = 273 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 113/270 (41%), Gaps = 59/270 (21%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL------GKENVQTIMLPYKYTSPQSL 336 L+DY++K ++G+SGG DS L +A A GKE V I + + Q Sbjct: 30 LKDYLKKTGAKGFVLGISGGQDSTLAGRLAQLAASELRQEGKEEVVFIAVRLPHGVQQDE 89 Query: 337 EDAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE----NIQSRIRG 388 +DA + KYD+ P + S+ Q++ G +++ N+++R+R Sbjct: 90 DDAQLALSFIQPDKSWKYDIAPA-------VTAFSEQYQKDTGGPLSDFNKGNVKARMRM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A+ +++ T + +E G+ T YGD PL L K Q G Sbjct: 143 IAQYAVGGEEGLLVIGTDHAAEAVTGFFTKYGDGGADVLPLTGLTKRQ-----------G 191 Query: 449 ITSGLGPLTEVI--PPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENE 500 T L E + P + K P+A+L +P QTD+ L Y +DD + K + E Sbjct: 192 RT-----LLEALQAPERLYLKKPTADLLDDKPQQTDETELGITYNEIDDYLEGKSVSEQA 246 Query: 501 ESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 I RYV+ SE+KR+ Sbjct: 247 AEAIEK---------RYVQ-----SEHKRQ 262 >gi|193213246|ref|YP_001999199.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Chlorobaculum parvum NCIB 8327] gi|193086723|gb|ACF11999.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobaculum parvum NCIB 8327] Length = 291 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 29/278 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVF 58 ++++A+ Q++ V + N+AKA + EA G +++ ELF + Y E + Sbjct: 5 QVRVALVQMS-CVENPQENLAKAEKCIREAAAGGANIVCLQELFTTLYFCQTEEYEPFAY 63 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRDKIN 116 + ++A+ L ++ G IV GV N+ ++DA G+ + K++ Sbjct: 64 AEPIPGPSTAALQELAAEL---GVVIVASLFEIRARGVHHNTAAVIDADGSYLGKYRKMH 120 Query: 117 LPNYSEFHEKRTFIS---GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +P+ F+EK FI GY F +I G+LIC D W + +GA+ +F Sbjct: 121 IPDDPGFYEKFYFIPGDLGYRIFKTRFGNI--GVLICWDQWY-PEAARLTALRGADIIFY 177 Query: 174 LNASPYYHN------KLKKRHEIVTGQISHVHLPIIYV---NQVGGQDELIFDGASFCFD 224 A + + + ++ T Q+ H +YV N+ G + EL F G SF D Sbjct: 178 PTAIGWATSETSQEVRASQQQAWKTVQLGHSVANGVYVAAANRAGTEGELEFWGNSFVSD 237 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSD 259 Q+ + H +E+ + + + S W +M D Sbjct: 238 PFGQVIAEAAHSNEEILYADCDFSKIGFYRSHWPFMRD 275 >gi|312892282|ref|ZP_07751778.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Mucilaginibacter paludis DSM 18603] gi|311295257|gb|EFQ72430.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Mucilaginibacter paludis DSM 18603] Length = 289 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 36/283 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K+K+ + Q++ N+ KA E G +I ELF S Y D+ + Sbjct: 1 MSKVKVGLVQMS-CTASKPDNLNKAIAKIRETAEGGAQIICLQELFTSLYFC-DVEDHDN 58 Query: 62 FIQACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 F A + + D L S + G I+ + +GV N+ +LDA G + K++ Sbjct: 59 FALAEAIPGPSTDALSSVAAELGVVIIASLFEKRAQGVYHNTTAVLDADGTYLGKYRKMH 118 Query: 117 LPNYSEFHEKRTFISG---YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +P+ F+EK F G Y F I G+LIC D W + GAE LF Sbjct: 119 IPDDPGFYEKFYFTPGDLGYKVFKTKFATI--GVLICWDQWY-PEAARITALMGAEILFY 175 Query: 174 LNASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 A + + +++ H + G VH +I +N+VG + + F G Sbjct: 176 PTAIGWATTQDEATNVEQYNAWQTIQRGHAVANG----VH--VIGINRVGEEAGVKFWGG 229 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYMSD 259 SF + L +Q H +E+N + E D+ + W ++ D Sbjct: 230 SFVSNPFGTLLYQASHDNEENIIHELDLDKTDYYRTHWPFLRD 272 >gi|305664551|ref|YP_003860838.1| putative NH(3)-dependent NAD synthetase [Maribacter sp. HTCC2170] gi|88708568|gb|EAR00804.1| putative NH(3)-dependent NAD synthetase [Maribacter sp. HTCC2170] Length = 262 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 17/172 (9%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQS 335 VL L+DY + +IG+SGGIDSA LCA +D L E +P Q Sbjct: 11 VLWLKDYAENAGIKGFVIGISGGIDSAVTSTLCAKTGLDLLCLE------MPIHQEKSQ- 63 Query: 336 LEDAAACAKALGCKYD-----VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + A L +D + + + ++F S + E + N ++R+R Sbjct: 64 VSRAQNHIAWLKTNFDKTSDLTVELTAVFDNFISAVPAVENEADRFMSLANTRARLRMTT 123 Query: 391 LMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 L + + ++ T NK E VG+ T YGD +P+ DL K++V+++A Sbjct: 124 LYYFAALNGYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVYEIA 175 >gi|322374303|ref|ZP_08048817.1| N-carbamoylputrescine amidase [Streptococcus sp. C300] gi|321279803|gb|EFX56842.1| N-carbamoylputrescine amidase [Streptococcus sp. C300] Length = 291 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 27/246 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED-----L 56 ++ +K+A Q+ D+A NI A R +A QG +IL ELF Y ++ Sbjct: 1 MRNVKVAAIQMQ-CAKDVATNIQTAERLVRQAADQGAQIILLPELFERPYFCQERQYDYY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + +S I+ ++AI K + + + F + + NS+ ++DA G ++ V K Sbjct: 60 QYAQSVIE--NTAIQHFKVIAKELQVVLPISFYEKGGNVLYNSIAVIDADGEVLGVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ + EK F G + + R ++GI IC D W + L GAE LF Sbjct: 118 HIPDDHYYQEKFYFTPGNTGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYP 176 Query: 173 -SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDG 218 ++ + P + + G + +P+I N+ GGQ L F G Sbjct: 177 TAIGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYG 236 Query: 219 ASFCFD 224 +SF D Sbjct: 237 SSFMTD 242 >gi|229013244|ref|ZP_04170385.1| Carbon-nitrogen hydrolase [Bacillus mycoides DSM 2048] gi|229168779|ref|ZP_04296498.1| Carbon-nitrogen hydrolase [Bacillus cereus AH621] gi|228614627|gb|EEK71733.1| Carbon-nitrogen hydrolase [Bacillus cereus AH621] gi|228748011|gb|EEL97875.1| Carbon-nitrogen hydrolase [Bacillus mycoides DSM 2048] Length = 280 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+K+A Q++ V GD+ NI A++ EA ++ D+I+ EL+ +GY DL Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKKKISEAMKERPDVIVLPELWTTGY---DLTRLSEI 76 Query: 63 IQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINL 117 A + ++T LK + G IV G +Q ++GV N++ V+ + GN++ K++L Sbjct: 77 --ADTDGLETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNNEGNLVNEYSKVHL 134 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + E + ++G D+ IC DI + H K GA+ LF + Sbjct: 135 --FQLMDEHKYLVAGNETGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEW 191 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L ++ + ++ N+ G F G S D Sbjct: 192 PLV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|158520585|ref|YP_001528455.1| NAD+ synthetase [Desulfococcus oleovorans Hxd3] gi|158509411|gb|ABW66378.1| NAD+ synthetase [Desulfococcus oleovorans Hxd3] Length = 259 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 20/203 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L +Y ++G+SGGIDSAL + + A V + LP P + +A Sbjct: 14 LVNYCDNAKMKGFVVGVSGGIDSALTSTLC--AKTGRPVWALNLPI-LQDPAQVSLSAKH 70 Query: 343 AKALGCKYDVLPIH--DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 L ++D + DL N SL N +SR+R L ++H Sbjct: 71 IAWLTGRFDNVRTETVDLSNVLASLQDALPDAVGDTRTLANTRSRLRMVTLYVFASHYSL 130 Query: 401 MLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++ T NK E VG+ T YGD +P+ DL KT+V++ A LG + E Sbjct: 131 LVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLVKTEVYEAA---------RHLGVIQE- 180 Query: 460 IPPSILEKSPSAELRPHQTDQES 482 IL+ P+ L P ES Sbjct: 181 ----ILDVPPTDGLWPDNRTDES 199 >gi|229111509|ref|ZP_04241060.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock1-15] gi|229152237|ref|ZP_04280430.1| Carbon-nitrogen hydrolase [Bacillus cereus m1550] gi|228631199|gb|EEK87835.1| Carbon-nitrogen hydrolase [Bacillus cereus m1550] gi|228671891|gb|EEL27184.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock1-15] Length = 280 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K D H G I +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGVETKEKLIEWAKQYDVHIVGGSIA----KQTEQGVTNTMYVVNNEGQLVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 236 >gi|255090070|ref|XP_002506956.1| carbon nitrogen hydrolase/NAD synthase [Micromonas sp. RCC299] gi|226522230|gb|ACO68214.1| carbon nitrogen hydrolase/NAD synthase [Micromonas sp. RCC299] Length = 701 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 128/602 (21%), Positives = 218/602 (36%), Gaps = 142/602 (23%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ-A 65 +A LN D GN+ + + + ++A ++G L EL + GY ED + + + Sbjct: 6 LASCVLNQWALDFEGNVKRVKASIQQAKQRGARYRLGPELELPGYGCEDHFLELDTTEHS 65 Query: 66 CSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S ++ L D D IV VG P N V + I+ +R K+ L N + Sbjct: 66 WESLVELLNGDETD---DIVCDVGMPVIHGGVRYNCRVFVLNRKILFIRPKLCLANDGNY 122 Query: 124 HEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSN 158 E R F ++G S P + F D +G CE+++ + Sbjct: 123 RESRWFTAWQHQKKIEDHQLPPAIVAVTGQSYVPFGDAILTFIDASMGSETCEELFTPAA 182 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV---TGQISHVHLPIIYVNQVGGQ-DEL 214 + G E + + + S + KL R +++ TG+ V++ Y NQ G L Sbjct: 183 PHIQMALNGVEVISNGSGSHHQLRKLNTRTDLIRSATGKCGGVYM---YANQRGCDGGRL 239 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQ-----------NFMTEWHYDQQLSQWNYMSDDSAS 263 +DG + C ++ Q + F+ Q + + + Q + D Sbjct: 240 YYDGCA-CIAVNGEIVAQGEQFAIQEVEVVTANVDLDAVVGFRGAFQSMAVQASASDKYP 298 Query: 264 TMYIPL-----------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 T+ +P QEE A AC L DY++++ ++ LS Sbjct: 299 TIRVPFTLCPTDYVSQVPHPPCEIRYHLPQEEIALGPACWLW--DYLRRSGASGYLLPLS 356 Query: 301 GGIDS-------------ALCAAIAVDALGKENV-----------------------QTI 324 GG DS A AAI+ D + ++ QT+ Sbjct: 357 GGADSSSTAAIVGSMCQLATAAAISGDDVAAADIRRIARIEGTDSLPSAKELARILFQTV 416 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS--------- 375 L + +S + ++A A +G + + I +V + + Q+ P Sbjct: 417 YLGSENSSAATRSRSSALAAEIGASHLDVRIDAVVAAVIAFFTSVTQKTPKFKVDGGSDV 476 Query: 376 -GIVAENIQSRIRGNILMALS--------NHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + +NIQ+RIR + L+ ++L ++N E GY T Y S Sbjct: 477 ENLALQNIQARIRMVLSFVLAQLMPWVRGRGGFLLVLGSANVDEGLRGYMTKYDCSSADI 536 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-----HQTDQE 481 NP+ + K + W G L + E P+AEL P QTD+E Sbjct: 537 NPIGGISKRDLRSFLRW--------GADKLGYPTLALVEEAPPTAELEPIRDDYVQTDEE 588 Query: 482 SL 483 + Sbjct: 589 DM 590 >gi|54026283|ref|YP_120525.1| NAD synthetase [Nocardia farcinica IFM 10152] gi|81679867|sp|Q5YRN0|NADE_NOCFA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|54017791|dbj|BAD59161.1| putative NAD synthetase [Nocardia farcinica IFM 10152] Length = 274 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 114/275 (41%), Gaps = 41/275 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC------AAIAVDALGKE-N 320 P+ E + + V L+DY++ ++G+SGG DS L AA V A G E Sbjct: 16 PVIEPKTEVRRRVDFLKDYLRSTPAQGFVLGISGGQDSTLTGRLCQLAAEEVRAEGGEAT 75 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEP-SGIV 378 + LPY + + DAA + +G V + + V+ +++ L + V Sbjct: 76 FVAVRLPYGVQADE--HDAAVAMEFIGPDRAVTVNVKPGVDATAGAVAEGLGLDALRDFV 133 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 NI++R R I A++ +++ T + +E G+ T YGD PL L K Sbjct: 134 RGNIKARERMIIQYAIAGQENLLVVGTDHAAEAVTGFFTKYGDGGVDLTPLTGLTK---- 189 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG PPS K P+A+L RP D+E+L Y +DD ++ Sbjct: 190 -----RQGAALLQELG-----APPSTWSKVPTADLEDDRPALPDEEALGLRYSEIDDYLE 239 Query: 495 RIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E + VE L + +KR Sbjct: 240 ------------GKEVTEAVAARVEQLYTATRHKR 262 >gi|61657455|emb|CAI44367.1| hypothetical protein [Thermotoga sp. SG1] Length = 267 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 5/169 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A Q+ P +G N+ K R EEA G+D+I+F EL ISGY ++ K Sbjct: 1 MRVASVQMLPTIGGFEENLNKVERFVEEAVSNGVDVIVFPELTISGYTWDEKTLAKGVRF 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A L + +G I VG PR + NS+VI I DK +L Sbjct: 61 FEEVARKKLLKLSREGQIAIAVGTPRLVLGKLRNSLVIFKKKREILFYDKTHLFR----G 116 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 EK F G + + G LIC +I I + L +G++ + S Sbjct: 117 EKDVFEPGEYFLVFSYGGVVFGTLICYEIG-FPEIARVLTLRGSKVILS 164 >gi|229047726|ref|ZP_04193306.1| Carbon-nitrogen hydrolase [Bacillus cereus AH676] gi|229129315|ref|ZP_04258286.1| Carbon-nitrogen hydrolase [Bacillus cereus BDRD-Cer4] gi|229146609|ref|ZP_04274976.1| Carbon-nitrogen hydrolase [Bacillus cereus BDRD-ST24] gi|228636779|gb|EEK93242.1| Carbon-nitrogen hydrolase [Bacillus cereus BDRD-ST24] gi|228653920|gb|EEL09787.1| Carbon-nitrogen hydrolase [Bacillus cereus BDRD-Cer4] gi|228723518|gb|EEL74883.1| Carbon-nitrogen hydrolase [Bacillus cereus AH676] Length = 280 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K D H G I +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGVETKEKLIEWAKRYDVHIVGGSIA----KQTEQGVTNTMYVVNNEGQLVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 236 >gi|255036384|ref|YP_003087005.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Dyadobacter fermentans DSM 18053] gi|254949140|gb|ACT93840.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Dyadobacter fermentans DSM 18053] Length = 299 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 45/293 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KK+ I + Q++ D+ N KA EA ++G ++I ELF S Y D+ Sbjct: 1 MAKKVNIGLVQMS-CTSDVDANFQKATEKIREAAQKGANIICLQELFKSLYFC-DIEDHS 58 Query: 61 SFIQACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKI 115 +F A + + ++L + + G I+ + G+ N+ +LDA G + K+ Sbjct: 59 NFSLAEAIPGPSTESLGALARELGVVIIASLFEKRAHGLYHNTTAVLDADGAYLGKYRKM 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI-----------RLGILICEDIWKNSNICKHLK 164 ++P+ ++EK F G + P+ +D ++G+LIC D W + Sbjct: 119 HIPDDPGYYEKFYFTPG--DAPVTEQDTDGYRIFNTKFAKIGVLICWDQWY-PEAARITS 175 Query: 165 KQGAEFLFSLNASPYYHNKL---------------KKRHEIVTGQISHVHLPIIYVNQVG 209 GAE LF A + N++ ++ H + G + ++ VN+VG Sbjct: 176 LMGAEILFYPTAIGWDVNEIDPIINEEQYGAWQTVQRGHAVANG------VYVVSVNRVG 229 Query: 210 GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSD 259 + + F G SF + Q +L + H E + E D + W ++ D Sbjct: 230 READQQFWGGSFIANPQGRLLYLAPHEGEVTHVEELDLEKLDFYRTTWPFLRD 282 >gi|229074855|ref|ZP_04207867.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock4-18] gi|228708284|gb|EEL60445.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock4-18] Length = 272 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A +AV+ + G + LPYK Q Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGNATFIAVRLPYKV---QK 86 Query: 336 LEDAAACAKAL--GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 ED A A + I V+ F + L E + N+++RIR A Sbjct: 87 DEDDAQLALQFIQADQSTAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYA 146 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + +++ T + +E G+ T +GD PL L K R + L Sbjct: 147 IGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRALLQEL 197 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 198 GA-----NERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|228954319|ref|ZP_04116345.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071539|ref|ZP_04204757.1| Carbon-nitrogen hydrolase [Bacillus cereus F65185] gi|228711475|gb|EEL63432.1| Carbon-nitrogen hydrolase [Bacillus cereus F65185] gi|228805251|gb|EEM51844.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 280 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K D H G I +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGVETKEKLIEWAKQYDIHIVGGSIA----KQTEQGVTNTMYVVNNEGQLVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 236 >gi|313624579|gb|EFR94561.1| carbon-nitrogen family hydrolase [Listeria innocua FSL J1-023] Length = 296 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 29/266 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFKK--- 60 LKIA+ Q V D N+ + + +EA+R+G DL+LF E++ +GY PP D F + Sbjct: 4 LKIALVQQLAVPNDKEANLNLSVKYIQEAHRKGADLVLFPEMWSNGYAPPFDTAFDEPMD 63 Query: 61 -SF-----------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 SF + S+ + TL+ + G+ + + ++ N+ +I+D G Sbjct: 64 ASFEEERTRWLADAVARDSAYVTTLRKLAKELNIGVCATYLSKTKQKPQNTAIIIDRNGE 123 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 II K++ +F + SG F I+LG++IC D + + L +G Sbjct: 124 IILDYAKVHT---CDFSLEALLQSGDEFKVCEFDGIKLGVMICYDR-EFPESARVLMLKG 179 Query: 168 AEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 AE + NA +P N+L R E + G ++ + P + +IFD Sbjct: 180 AEIILVPNACDMNPARLNQLNSRAFENMVG-VAMANYPGEKWGRSTAFSPIIFDENG--- 235 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D Q + SE F+ E++ D+ Sbjct: 236 DYQDNTIIETDDVSEGIFIAEFNLDE 261 >gi|47076756|dbj|BAD18300.1| unknown conserved protein [Geobacillus stearothermophilus] Length = 273 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 18/241 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ--GMDLILFTELFISGYPPEDLVF 58 M + IA+AQ+ P GDI N+AK E R+ + L+LF EL+ +GY +++ Sbjct: 1 MNRPFDIALAQMMPADGDIGANLAKMETIIHECKRKFPNVRLLLFPELYTTGYVLSEML- 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 K++ S + + G+ +D G L NS++++D G I KI+ Sbjct: 60 KEAAQTWDGSTFQHMSQLAQTFQLYLAYGYVEKDHTGNLYNSLMLIDPNGQCIGNYRKIH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 L + EK F G + R+G++IC D+ + ++L GAE L A Sbjct: 120 LTPF----EKAWFSKGAEPVLVDTELGRIGLMICWDL-AFPELARYLAVHGAELLLVPCA 174 Query: 177 --SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQQQLAFQ 232 SP +H +K + + + NQ+G F G S + DG++ A Sbjct: 175 WESP-FHAPFQK---FAMARAIDNTVYVAACNQIGSSSSFHFFGLSSIYGPDGRKIAAAN 230 Query: 233 M 233 M Sbjct: 231 M 231 >gi|153001098|ref|YP_001366779.1| NAD synthetase [Shewanella baltica OS185] gi|189083408|sp|A6WPH7|NADE_SHEB8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|151365716|gb|ABS08716.1| NAD+ synthetase [Shewanella baltica OS185] Length = 276 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 38/246 (15%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQ---- 322 E E + V ++ +++ +++G+SGG+DS+ LC +AVD+L EN Q Sbjct: 16 EPEFEVQRRVAFIKTKLKEARSKALVLGISGGVDSSTAGRLCQ-LAVDSLNHENSQGGYQ 74 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE--PSGIV 378 + LPY+ + E AC K + +H V+ S L E P V Sbjct: 75 FIAVRLPYQIQKDEH-EAQLACQFIQPSKLVTVNVHQGVDGVHSATVAALAEAGLPLPDV 133 Query: 379 AE------NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 A+ N+++R+R L+ +++ T + +E G+ T +GD + PL L Sbjct: 134 AKVDFVKGNVKARMRMIAQYELAGLVGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGL 193 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPI 488 K QV QLA++ + P S++ K+P+A+L +P D+ +L Y Sbjct: 194 NKRQVRQLAAYLGA--------------PKSLVHKAPTADLEDNKPLLEDEVALGLTYAQ 239 Query: 489 LDDIIK 494 +DD ++ Sbjct: 240 IDDFLE 245 >gi|307708676|ref|ZP_07645139.1| hydrolase, carbon-nitrogen family [Streptococcus mitis NCTC 12261] gi|307615250|gb|EFN94460.1| hydrolase, carbon-nitrogen family [Streptococcus mitis NCTC 12261] Length = 291 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 27/246 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +++A Q+ D++ NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVAAIQMQ-CAKDVSTNIQTAERLVRQAAEQGAQIILLPELFERPYFCQERQY--D 57 Query: 62 FIQACSS-----AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + Q S AI K + + + F +D + NS+ ++DA G ++ V K Sbjct: 58 YYQHAQSVTDNTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ + EK F G + + R ++GI IC D W + L GAE LF Sbjct: 118 HIPDDHYYQEKFYFTPGNTGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYP 176 Query: 173 -SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDG 218 ++ + P + + G + +P+I N+ GGQ L F G Sbjct: 177 TAIGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVAPSEENGGQSSSLDFYG 236 Query: 219 ASFCFD 224 +SF D Sbjct: 237 SSFMTD 242 >gi|150020942|ref|YP_001306296.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosipho melanesiensis BI429] gi|149793463|gb|ABR30911.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosipho melanesiensis BI429] Length = 264 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 71/167 (42%), Gaps = 6/167 (3%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA AQ P GD GN AK + +EA LILF EL ISGY + + S I Sbjct: 3 IAAAQFEPKPGDFEGNYAKHLKFIDEAASLEARLILFPELSISGYTYDRKILLSS-IDFF 61 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + L + IV G PR+ + NSV ++ I DK +L EK Sbjct: 62 RQKRNELIYLSRKYNMAIVGGIPRKILLEIRNSVFVVRKKKQILFYDKTHLFR----KEK 117 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 F G F +R GIL+C +I I + L GA+ L + Sbjct: 118 EVFSPGERFLVFKFNGVRFGILVCYEIG-FPEISRILTLNGAQVLLA 163 >gi|229037621|ref|ZP_04189479.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH1271] gi|228727696|gb|EEL78814.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH1271] Length = 272 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 30/225 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DYV+K ++G+SGG DS L A IAV+ + G + LPYK + Sbjct: 30 LKDYVKKTGAKGFVLGISGGQDSTLAGRLAQIAVEEIRNEGGNATFIAVRLPYKVQKDE- 88 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 89 -DDAQLALQFIQADQSVAFDIASTVDTFSNQYENVLGESLTDFNKGNVKARIRMVTQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T + +E G+ T +GD PL L K Q G Sbjct: 148 GGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTKRQ---------------GRA 192 Query: 455 PLTEVIPPSILE-KSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L E+ L K P+A+L +P Q D+ L Y LDD ++ Sbjct: 193 LLQELSADERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|91763127|ref|ZP_01265091.1| NH(3)-dependent NAD+ synthetase NadE [Candidatus Pelagibacter ubique HTCC1002] gi|91717540|gb|EAS84191.1| NH(3)-dependent NAD+ synthetase NadE [Candidatus Pelagibacter ubique HTCC1002] Length = 245 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 17/168 (10%) Query: 283 LRDYVQK--NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQ---S 335 ++DYV K + +IIG+SGGIDS++ + ++ ++TI+L P K S Q S Sbjct: 14 IKDYVNKMPSKAQSLIIGISGGIDSSVSSTLS----AMTGIKTIVLSMPIKQKSSQHDLS 69 Query: 336 LEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 L+ K +D + H + ++ F L S + N ++RIR L + Sbjct: 70 LKHQEWLVK----NFDNVEAHTINLDKLFETFESTLSNFDSELGMANSRARIRMTTLYQV 125 Query: 395 SNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 + +K +++ T NK E VG+ T YGD +P+ D K++V+++ Sbjct: 126 AAANKGIVVGTGNKVEDFGVGFYTKYGDGGVDISPIADCNKSEVWEIG 173 >gi|261420142|ref|YP_003253824.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y412MC61] gi|319766954|ref|YP_004132455.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y412MC52] gi|261376599|gb|ACX79342.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y412MC61] gi|317111820|gb|ADU94312.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y412MC52] Length = 302 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 18/241 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ--GMDLILFTELFISGYPPEDLVF 58 M + IA+AQ+ P GDI N+AK E R+ + L+LF EL +GY +++ Sbjct: 1 MNRPFDIALAQMTPADGDIGANLAKMETIIHECKRKFPNVRLLLFPELCTTGYVLSEML- 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 K++ S + I G+ +D G L NS++++D G I KI+ Sbjct: 60 KEAAQTWDGSTFQHMSQLAQTFQLYIAYGYVEKDHTGNLYNSLMLIDPNGQCIGNYRKIH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 L + EK F G + R+G++IC D+ + ++L GAE L A Sbjct: 120 LTPF----EKAWFSKGAEPVLVDTELGRIGLMICWDL-AFPELARYLAVHGAELLLVPCA 174 Query: 177 --SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQQQLAFQ 232 SP +H +K + + + NQ+G F G S + DG++ A Sbjct: 175 WESP-FHAPFQK---FAMARAIDNTVYVAACNQIGSSSSFHFFGLSSIYGPDGRKIAAAN 230 Query: 233 M 233 M Sbjct: 231 M 231 >gi|157374941|ref|YP_001473541.1| NAD synthetase [Shewanella sediminis HAW-EB3] gi|229470270|sp|A8FU90|NADE_SHESH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|157317315|gb|ABV36413.1| NAD+ synthetase [Shewanella sediminis HAW-EB3] Length = 276 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 36/248 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQT- 323 P E E + V ++ ++++ H +++G+SGG+DS L +AVD L E+ QT Sbjct: 13 PAIEPEYEVQRRVAFIKSKLKESYTHTLVLGISGGVDSTLAGRLCQLAVDELNGESQQTD 72 Query: 324 -----IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV--------NHFFSLMSQFL 370 + LPY + E AC K + IHD V N + Sbjct: 73 YQFIAVRLPY-HIQKDEHEAQLACDFISPSKQVSVNIHDGVLGTHHNTLNGLEAAGVDLA 131 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 Q V N+++R+R + ++ + +++ T + +E G+ T +GD + PL Sbjct: 132 QNVNIDFVKGNVKARMRMIVQYEIAGLTGGLVVGTDHSAENITGFYTKWGDGACDLAPLF 191 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PY 486 L K QV LA + + P ++ K+P+A+L +P D+ +L Y Sbjct: 192 GLNKRQVRLLADYLGA--------------PELLVHKAPTADLECDKPQLEDEAALGVTY 237 Query: 487 PILDDIIK 494 +DD ++ Sbjct: 238 DQIDDFLE 245 >gi|126174756|ref|YP_001050905.1| NAD synthetase [Shewanella baltica OS155] gi|160875770|ref|YP_001555086.1| NAD synthetase [Shewanella baltica OS195] gi|217972980|ref|YP_002357731.1| NAD synthetase [Shewanella baltica OS223] gi|189083407|sp|A3D5M3|NADE_SHEB5 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189083409|sp|A9L564|NADE_SHEB9 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766715|sp|B8E735|NADE_SHEB2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|125997961|gb|ABN62036.1| NH(3)-dependent NAD(+) synthetase [Shewanella baltica OS155] gi|160861292|gb|ABX49826.1| NAD+ synthetase [Shewanella baltica OS195] gi|217498115|gb|ACK46308.1| NAD+ synthetase [Shewanella baltica OS223] gi|315267959|gb|ADT94812.1| NAD+ synthetase [Shewanella baltica OS678] Length = 276 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 38/246 (15%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQ---- 322 E E + V ++ +++ +++G+SGG+DS+ LC +AVD+L EN Q Sbjct: 16 EPEFEVQRRVAFIKTKLKEARSKALVLGISGGVDSSTAGRLCQ-LAVDSLNHENSQGGYQ 74 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE--PSGIV 378 + LPY+ + E AC K + +H V+ S L E P V Sbjct: 75 FIAVRLPYQIQKDEH-EAQLACQFIQPSKLVTVNVHQGVDGVHSATVAALAEAGLPLPDV 133 Query: 379 AE------NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 A+ N+++R+R L+ +++ T + +E G+ T +GD + PL L Sbjct: 134 AKVDFVKGNVKARMRMIAQYELAGLVGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGL 193 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPI 488 K QV QLA++ + P S++ K+P+A+L +P D+ +L Y Sbjct: 194 NKRQVRQLAAYLGA--------------PESLVHKAPTADLEDNKPLLEDEVALGLTYAQ 239 Query: 489 LDDIIK 494 +DD ++ Sbjct: 240 IDDFLE 245 >gi|330502380|ref|YP_004379249.1| NAD synthetase [Pseudomonas mendocina NK-01] gi|328916666|gb|AEB57497.1| NAD synthetase [Pseudomonas mendocina NK-01] Length = 275 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 27/213 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 +++ ++++ +++G+SGG+DS A ++V+ L G + I + + + Sbjct: 35 IKNTLKQSGLKVLVLGISGGVDSTTAGRLAQLSVEELRAETGDAGYRFIAVRLPHNTQHD 94 Query: 336 LEDAAACAKALGCKYD-VLPIHDLVNHFFSLMS--QFLQEEPSGIVAENIQSRIRGNILM 392 DA A + + + I D VN +S Q L + V N+++RIR Sbjct: 95 EHDAQASLNFIRADENATVNIADSVNGLVQQVSHLQQLSDARRDFVIGNVKARIRMVAQF 154 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++N + +++ T + +E +G+ T +GD + PL L K QV +A+ Sbjct: 155 TIANANNGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKHQVRAIAAH--------- 205 Query: 453 LGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 LG P +++K+P+A ELRP + D+E+ Sbjct: 206 LGA-----PEHLVQKTPTADLEELRPGKPDEEA 233 >gi|329119214|ref|ZP_08247901.1| NAD+ synthetase [Neisseria bacilliformis ATCC BAA-1200] gi|327464561|gb|EGF10859.1| NAD+ synthetase [Neisseria bacilliformis ATCC BAA-1200] Length = 264 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 8/165 (4%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LRDY +G+SGG+DSA+ +A+A A +V + +P + + Q Sbjct: 14 LRDYAAAARARGFAVGVSGGVDSAVVSALA--ARSGLDVLLLEMPIRQQADQVSRAQQHI 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQ----EEPSGIVA-ENIQSRIRGNILMALSNH 397 A+ G +V + + F+L + + + P+ +A N +SR+R L + Sbjct: 72 ARLTGAFANVRSLRADLTPVFNLFADTVNVSEADYPAKQLALANSRSRLRMLTLYYYAQI 131 Query: 398 SKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 + ++ T NK E VG+ T YGD +P+ DL KTQV+ LA Sbjct: 132 NGLLVAGTGNKIEDFGVGFFTKYGDGGVDLSPIADLTKTQVYALA 176 >gi|320537586|ref|ZP_08037524.1| NAD+ synthetase [Treponema phagedenis F0421] gi|320145588|gb|EFW37266.1| NAD+ synthetase [Treponema phagedenis F0421] Length = 646 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 130/601 (21%), Positives = 242/601 (40%), Gaps = 98/601 (16%) Query: 23 IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGA 82 IA+ R+A N Q D+I+F +L IS DL ++++ + A SA++ + ++T Sbjct: 30 IAEIRKA---VNLQA-DMIVFPQLSISSASCGDLFYQQTLLTAAKSALEYIINETETLVI 85 Query: 83 GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP-----NYSEFHEKRTFISGYSNDP 137 VVG P + + N ++ G ++ + +N P Y+ HE R + + + Sbjct: 86 VSVVGLPLFVKGKLYNCSAVICQGRVLGIV-PLNTPLKQFSVYTSPHETRQIM--LNAET 142 Query: 138 IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS---LNASPYYHNKLKKRHEIVTGQ 194 + F D L I E+ + K A+ + + + + P L + + ++ Sbjct: 143 LTFFDTDL-IFEIENGLFSFCFGDFQKNTAADLIINQLFIPSLPRTEIDLYRNVKAISQN 201 Query: 195 ISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW------H 246 I L YVN G+ +++ G + F+ + LA +E+ M E Sbjct: 202 IGKAFL---YVNAGWGESSTDMVCAGEAGIFEAGECLASGSGFNNEKFLMRETGGFVMAD 258 Query: 247 YDQQLSQWNYMS----DDSASTM-----------------------YIPLQEEEAD---- 275 D Q+ + + ST+ +IP++ +E+ Sbjct: 259 IDMQILAHKKIKAAEQRQAVSTVVPIPPMQAKTDMRNLFRPVNDEPFIPIELKESRKQAD 318 Query: 276 --YNACVLSLRDYVQKNNFH----KVIIGLSGGIDSALCAAIAVDAL-----GKENVQTI 324 YN ++ + K H ++++G+SGG+DS+L IA A + ++ I Sbjct: 319 LFYNRMLILAAQGLAKRLTHIGCTRMLLGISGGLDSSLALLIAAKAADLIKASRSDIFAI 378 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 +P T+ ++ +A A L C + + I D V F + Q + I EN Q+ Sbjct: 379 TMPGFGTTERTKNNAVELAAILQCTVEEISIADSVLQHFKDIGQ--DPKKHDITYENAQA 436 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA--S 442 R R ILM +N +++ + SE+++G+ T GD + + KT + + Sbjct: 437 RERTQILMDKANQVNGLVIGPGDLSELALGWTTYNGDHMSMYGVNSSIPKTLLRSIIENC 496 Query: 443 WRNSHGITSGLGP--LTEVIPPSILEKSPSAELRP------HQTDQESLPPYPILDDIIK 494 N TSG T+++ IL S EL P Q + + PY + D + Sbjct: 497 KDNPQEFTSGKDKQGFTDIL-TDILNTPVSPELLPPQNGVISQKTEHIVGPYRLHDFFLY 555 Query: 495 RIVEN-----------EESFINNDQ-EYNDETVRYVEHL----LYGSEYKRRQAPVGTKI 538 ++ + E+SFI + EY E + + + +YKR P G ++ Sbjct: 556 NVIMHGFGPKKLLFLAEQSFIKEGKNEYTREEILSWLFVFFKRFFSQQYKRSCIPDGPQV 615 Query: 539 T 539 + Sbjct: 616 S 616 >gi|297624395|ref|YP_003705829.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Truepera radiovictrix DSM 17093] gi|297165575|gb|ADI15286.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Truepera radiovictrix DSM 17093] Length = 287 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 13/256 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ Q P N A+ + +G+D++ E ++GY + V +++ Sbjct: 2 IRHALVQFKPHKSQGERNAARLAEVIAQLAGEGVDVLTLPETALTGYFLQAGVREQALTA 61 Query: 65 ACSSAI--DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD----AGNIIAVRDKINLP 118 A A+ +++ I VGF +D NS + + I V K+ LP Sbjct: 62 AEMLALLQRAVRAAGRSEPLDICVGFYERDGGHFYNSALYAELNTPQAGIRHVHRKLFLP 121 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 Y F E+R G+ D R R G+LICED W S L +GA+ L+ ASP Sbjct: 122 TYGVFDEERYVSRGWRLDAFDTRFGRAGMLICEDAWHTSTAAV-LALKGADVLYIPTASP 180 Query: 179 YYH------NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ + G + ++ G + F G S D L + Sbjct: 181 VRDLTGAEPANVQRWEDTAKGIAGEHGVYVVTTCLTGFEGGKGFSGGSHVMDPYGALIAR 240 Query: 233 MKHFSEQNFMTEWHYD 248 F E +T+ H + Sbjct: 241 APLFHEHLLLTDLHLE 256 >gi|303274976|ref|XP_003056798.1| carbon nitrogen hydrolase/NAD synthase [Micromonas pusilla CCMP1545] gi|226461150|gb|EEH58443.1| carbon nitrogen hydrolase/NAD synthase [Micromonas pusilla CCMP1545] Length = 699 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 125/591 (21%), Positives = 205/591 (34%), Gaps = 123/591 (20%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ ++A LN D GNIA+ + + +A G + EL I GY ED + Sbjct: 1 MRIARLATCALNQWALDFEGNIARVKASILQAKEAGARYRVGPELEIPGYGCEDHFLEVD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ + L D +G P N V + I+ +R K+ L N Sbjct: 61 TIEHSWECLADLLRDDTTDDILCDIGMPVIHAGVRYNCRVFVLNRQIVLIRPKLCLANDG 120 Query: 122 EFHEKRTF------------------ISGYSNDPIVFRDIRLGIL-------ICEDIWKN 156 + E R F +S S + + F D L L CE+++ Sbjct: 121 NYRETRWFTAWQHPKKVEQHRLPMSVVSVTSQNYVNFGDAGLDFLDSTLASETCEELFTP 180 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 + L G E + + + S + KL R +++ + +Y NQ G L Sbjct: 181 NAPHIQLALSGVEIISNGSGSHHQLRKLNTRMDLIQSATAKAGGVYLYANQRGCDGGRLY 240 Query: 216 FDG-ASFCFDGQ-----QQLAFQ--------------------MKHFSEQNFMTEWH--- 246 +DG A +G+ QQ A Q + + Q E H Sbjct: 241 YDGCACIAVNGEIVAQGQQFAVQEVEVVTADVDLDTVVGFRGAFQSMAVQAAGCEKHPLI 300 Query: 247 -YDQQLSQWN---YMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 QL N ++ D Y EE A+ AC L DY++++ ++ LSGG Sbjct: 301 KVPFQLCFENGTSHVPDPPRPVRYHTADEEIANGPACW--LWDYLRRSGASGYLLPLSGG 358 Query: 303 IDSALCAAI---------AVDALGKENV---------------------------QTIML 326 DS+ AA+ + A G E T+ L Sbjct: 359 ADSSSTAALVGSMCQLATSAAASGDERAAADVRRIAQLSDDAPLPSAKEFAQYLFTTVYL 418 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----------G 376 + +S + +A+ A +G + + I ++ S Q P Sbjct: 419 GSENSSVDTRSRSASLAAEIGSSHLDVKIDAVITAVVSFFHSVTQRTPKFKVDGGSTVEN 478 Query: 377 IVAENIQSRIRGNILMALS--------NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +NIQ+RIR + L+ + ++L ++N E GY T Y + NP Sbjct: 479 LALQNIQARIRMVLSFVLAQLMPWVRGKNGFLLVLGSANVDEGLRGYMTKYDCSAADVNP 538 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 + + K + W + G L S+ E P+AEL P + D Sbjct: 539 IGGISKGDLRSFLRW---GAVNLGFPTLA-----SVEEAPPTAELEPIRDD 581 >gi|148988357|ref|ZP_01819804.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP6-BS73] gi|147926038|gb|EDK77112.1| carbon-nitrogen hydrolase family protein [Streptococcus pneumoniae SP6-BS73] Length = 291 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A QG +IL ELF Y ++ + Sbjct: 1 MRNVRVATIQMQ-CAKDVATNIQTAERLVRQAAEQGAQIILLPELFEHPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVAENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI IC D W + L AE LF + Sbjct: 120 PDDHYYQEKFYFTPGNTGFKVWNTRYAKIGIGICWDQW-FPETARCLALNDAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|330891265|gb|EGH23926.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. mori str. 301020] Length = 264 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 19/234 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q +P+ DI+GN+ + + + A QG L++ E+F++GY + Sbjct: 1 MRIALYQCSPLPLDISGNLTRLEQQAQAAAEQGAQLLICPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 A + + G I+ G+P DQ+ V N+V ++D+ G + K +L +S Sbjct: 61 QDGPAATRIAAIAQASGIAILYGYPEHGPDQQ-VYNAVQLIDSRGTRLCNYRKTHL--FS 117 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLNASP 178 E ++ F +G + P+V D RLG+LIC D+ N + L GAE + + N P Sbjct: 118 EL-DRSMFAAGEDHYPVVELNDWRLGMLICYDVEFPENT-RRLALAGAELILVPTANMLP 175 Query: 179 Y-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 Y + ++ R H ++Y N G + + + G +S C DG + L Sbjct: 176 YDFVCEVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLSSICAPDGSRPL 224 >gi|229081291|ref|ZP_04213794.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock4-2] gi|228701913|gb|EEL54396.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock4-2] Length = 280 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K D H G I +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGVETKEKLIEWAKQYDIHIVGGSIA----KQTEQGVTNTMYVVNNEGQLVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 236 >gi|149773470|ref|NP_001092723.1| glutamine-dependent NAD(+) synthetase [Danio rerio] gi|148744706|gb|AAI42820.1| Zgc:165489 protein [Danio rerio] Length = 694 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 127/590 (21%), Positives = 206/590 (34%), Gaps = 129/590 (21%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A ++G L EL I GY D ++ Sbjct: 1 MGRKVTLATCSLNQWALDFDGNLGRILKSIEIAKQKGAKYRLGPELEICGYGCADHFYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + C + +L VG P N VI I+ +R K+ L NY Sbjct: 61 DTLLHCFQVLKSLLESPLTQDIICDVGMPVMHHNVRYNCRVIFLNKKILFIRPKMLLANY 120 Query: 121 SEFHEKRTFISGYSN-------------------DPIVFRDIRLGIL-------ICEDIW 154 E R F S +S + F D+ L + IC ++W Sbjct: 121 GNNREFRWF-SPWSRPRYVEEYFLPRMIQDVTEQSTVPFGDVVLSTIDTCIGSEICAELW 179 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEI--VTGQISHVHLPIIYVNQVGGQ- 211 + + G E N+S YH K H + V + ++ NQ G Sbjct: 180 NPRSPHVDMGLDGIEIF--TNSSASYHELRKADHRVNLVKSATTKSGGIYMFANQRGCDG 237 Query: 212 DELIFD--------------GASFCFDGQQQLAFQMKHFSEQNFMTE-WHYDQQLSQWNY 256 D L +D GA F + + + + +++ E H + Y Sbjct: 238 DRLYYDGCAMIAINGDIVARGAQFSLEDVEVVTATLDLEDVRSYRGERCHPHMEYEHKPY 297 Query: 257 M----------SDDSASTMYIPLQ------EEEADYN-ACVLSLRDYVQKNNFHKVIIGL 299 DD + P++ EEE AC L DY++++ ++ L Sbjct: 298 QRIKTDFSLSDCDDRCLPTHQPVEWIFHTPEEEISLGPACW--LWDYLRRSGQAGFLLPL 355 Query: 300 SGGIDSALCAAIAVDALGK-------------ENVQTIMLPYKY---------------- 330 SGG+DS+ A I + E+VQ ++ Y Sbjct: 356 SGGVDSSSSACIVYSMCVQICQAVEHGNCQVLEDVQRVVGDSSYRPQDPRELCGRLFTTC 415 Query: 331 --TSPQSLEDAAACAKALGCKYDV--------LPIHDLVNHFFSLMSQFLQEEPSG---- 376 S S ED AK L + + + ++ F + ++ Q +G Sbjct: 416 YMASENSSEDTRNRAKDLAAQIGSNHLNINIDMAVKAMLGIFSMVTGKWPQFRANGGSAR 475 Query: 377 --IVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + +N+Q+RIR + L A ++L ++N E GY T Y S Sbjct: 476 ENLALQNVQARIRMVLAYLFAQLCLWAQGKTGGLLVLGSANVDESLTGYFTKYDCSSADI 535 Query: 427 NPLKDLYKTQVFQLASWRNSH-GITSGLGPLTEVIPPSILEKSPSAELRP 475 NP+ + KT + + +TS +G ILE P+AEL P Sbjct: 536 NPIGGVSKTDLKGFLEYCVKRLQLTSLIG---------ILEAPPTAELEP 576 >gi|328768106|gb|EGF78153.1| hypothetical protein BATDEDRAFT_33585 [Batrachochytrium dendrobatidis JAM81] Length = 687 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 129/602 (21%), Positives = 208/602 (34%), Gaps = 139/602 (23%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN D +GN + + + ++A G L EL I GY D + Sbjct: 1 MPAYITLATCSLNQWALDFSGNYTRIQESIDQAKAAGACYRLGPELEIPGYGCNDHFLEA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPN 119 Q + L + + G VG P Q G+L N VI I+ +R K+ + N Sbjct: 61 DTHQHSWEVLAKLLENPQNVGITCDVGMPVM-QRGILYNCRVIFRDHTIVMIRPKMFMAN 119 Query: 120 YSEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIW 154 + E R F ++G ++ P + F D +G ICE+++ Sbjct: 120 DGNYREIRWFTPWSEYKKLDQLCLPKIISKLNGQTSAPFGDGVVAFSDAVIGTEICEELF 179 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL 214 + + G E + +AS + KL++R +++ +Y NQ G E Sbjct: 180 TPHSPHVQMSLDGVEIFTNGSASHHEFCKLEQRVQLIKSATEKCGGIYLYSNQKGCDGER 239 Query: 215 IF---------------DGASFCF-------------------DGQQQLAFQMKHFSEQN 240 ++ GA F G + Q E Sbjct: 240 VYYDGCPLIVLNGDVVAQGAQFSLAEVEVITATVDLDDVRAYRSGLVSRSLQAASIKEHF 299 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + H D L+Q S Y EE AC L DY+++ + LS Sbjct: 300 PVV--HLD-SLAQ-------PCSVKYHSPSEEIRLGPACW--LWDYLRRTQSGGYFLPLS 347 Query: 301 GGIDSALCAAIA----------VDALGKENVQTI------------MLPYKY-------- 330 GGIDS A I +D K+ +Q + M P K Sbjct: 348 GGIDSCSSALIVFSMCELVHARLDCSDKKVIQDLEAIVGASIDTSSMSPSKICGLLLHTC 407 Query: 331 ------TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS--------- 375 +S + + AA AK +G + + I V+ + P Sbjct: 408 YMGTINSSNATRDRAAILAKRIGSWHLSINIDAGVDAIMGIFQLATGTSPKFHVHGGSVR 467 Query: 376 -GIVAENIQSRIRGNILMALS--------NHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 I +NIQ+R+R I + S ++L ++N E+ GY T Y S Sbjct: 468 ENIALQNIQARLRMVIAYLFAQLLPWTRDRRSSLLVLGSANVDEMLRGYLTKYDCSSADL 527 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-----HQTDQE 481 NPL + K + + ++ L L+E + P+AEL P QTD++ Sbjct: 528 NPLGGISKVDLVEFV--KHMAESVPELDILSEFV-----SAPPTAELEPITLQHVQTDED 580 Query: 482 SL 483 + Sbjct: 581 DM 582 >gi|320326447|gb|EFW82500.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. glycinea str. B076] gi|320331582|gb|EFW87520.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. glycinea str. race 4] gi|330872304|gb|EGH06453.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. glycinea str. race 4] Length = 264 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q +P+ DI+GN+ + + + A QG L++ E+F++GY + Sbjct: 1 MRIALYQCSPLPLDISGNLTRLEKQAQAAAEQGAQLLICPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + V N+V ++D+ L NY + Sbjct: 61 QDGPAASRIAAIAQASGIAILYGYPERGPDQQVYNAVQLIDS-------RGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFAAGEDHYPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + ++ R H ++Y N G + + + G +S C DG + L Sbjct: 173 MLPYDFVCEVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLSSLCAPDGSRPL 224 >gi|146306442|ref|YP_001186907.1| NAD synthetase [Pseudomonas mendocina ymp] gi|189083399|sp|A4XS59|NADE_PSEMY RecName: Full=NH(3)-dependent NAD(+) synthetase gi|145574643|gb|ABP84175.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas mendocina ymp] Length = 275 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 37/218 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPY----- 328 +++ ++++ +++G+SGG+DS A ++V+ L E T + LP+ Sbjct: 35 IKNTLKQSGLKVLVLGISGGVDSTTAGRLAQLSVEELRAETGDTDYRFIAVRLPHNTQHD 94 Query: 329 KYTSPQSLEDAAACAKA-LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 ++ + SL+ A +A + V+ + + V+H Q L + V N+++RIR Sbjct: 95 EHDAQDSLKFVNADEEATVNIAASVIGLSEQVSHL-----QQLSDARRDFVIGNVKARIR 149 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 ++N + +++ T + +E +G+ T +GD + PL L K QV +A+ Sbjct: 150 MVAQFTIANANNGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKHQVRAIAAH---- 205 Query: 448 GITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 LG P +++K+P+A ELRP + D+E+ Sbjct: 206 -----LGA-----PQHLVQKTPTADLEELRPGKPDEEA 233 >gi|255073895|ref|XP_002500622.1| predicted protein [Micromonas sp. RCC299] gi|226515885|gb|ACO61880.1| predicted protein [Micromonas sp. RCC299] Length = 694 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 131/602 (21%), Positives = 216/602 (35%), Gaps = 142/602 (23%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A LN D GN+A+ + + A R+G + EL + GY ED + + Sbjct: 6 LATCALNQWALDFEGNLARVKSSISIAKRRGARYRVGPELELPGYGCEDHFLELDTTEHS 65 Query: 67 SSAI-DTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + D L D D IV VG P N V + I+ +R K+ L N + Sbjct: 66 WECLADLLNGDETD---EIVCDVGMPVIHGGVRYNCRVFVLNRKILLIRPKLCLANDGNY 122 Query: 124 HEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSN 158 E R F ++G S P + F D LG CE+++ + Sbjct: 123 RETRWFTAWQHQKKIEDHQLPPAIVAVTGQSCVPFGDAALEFLDASLGSETCEELFTPAA 182 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV---TGQISHVHLPIIYVNQVGGQ-DEL 214 + G E + + + S + KL R +++ TG+ V++ Y NQ G L Sbjct: 183 PHIQMALSGVEVISNGSGSHHQLRKLNTRMDLIRSATGKCGGVYM---YANQRGCDGGRL 239 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQ-----------NFMTEWHYDQQLSQWNYMSDDSAS 263 +DG + C ++ Q + F+ Q + + + Q + D Sbjct: 240 YYDGCA-CIAVNGEIVAQGEQFAIQEVEVVIANVDLDAVVGFRGAFQSMAVQASAGDKYP 298 Query: 264 TMYIPL-----------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++P QEE A AC L DY++++ ++ LS Sbjct: 299 MIHVPFRLCPNDNVSRIPHSPCDIRYHSPQEEIALGPACWLW--DYLRRSGASGYLLPLS 356 Query: 301 GGIDS-------------ALCAAIAVDALGKENV-----------------------QTI 324 GG DS A AA++ D + +V QT+ Sbjct: 357 GGADSSSTAAIVGSMCQLATAAAVSGDEVAVADVRRIAQIDENDPLPCAKELAHLLFQTV 416 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS--------- 375 L + +S + ++A A +G + + I +V + + Q+ P Sbjct: 417 YLGSENSSAATRSRSSALAAEIGASHLDVRIDTVVAAVVAFFTSVTQKTPKFRVDGGSNV 476 Query: 376 -GIVAENIQSRIRGNILMALS--------NHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + +NIQ+RIR + L+ ++L ++N E GY T Y S Sbjct: 477 ENLALQNIQARIRMVLSFVLAQLMPWVRGRSGFLLVLGSANVDEGLRGYMTKYDCSSADI 536 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-----HQTDQE 481 NP+ + K + W G L EV E P+AEL P QTD+E Sbjct: 537 NPIGGISKGDLRSFLRWAADR---LGYPTLAEV-----EEAPPTAELEPIRDDYVQTDEE 588 Query: 482 SL 483 + Sbjct: 589 DM 590 >gi|51892287|ref|YP_074978.1| NH(3)-dependent NAD+ synthetase [Symbiobacterium thermophilum IAM 14863] gi|51855976|dbj|BAD40134.1| NH(3)-dependent NAD+ synthetase [Symbiobacterium thermophilum IAM 14863] Length = 321 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%) Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP------YKYTSPQSLE 337 R+Y+ ++ +I LSGG+DS+ AAI+ A + ++LP K Q + Sbjct: 31 REYMARSGIRTLINSLSGGVDSSTVAAISKQA-APDGALGLILPCSTPEEMKGERLQDVR 89 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAE---------NIQSRI 386 DA A LG + + DL +L S +E E +G+ E N++ + Sbjct: 90 DAERVAAHLGIPAVTIDLSDLWQQAAALFSAAARELAEKAGVPLEEERLQWAIHNMKPTL 149 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R ++ + +++ T N E +GY +L GD P++D K +V +A+ Sbjct: 150 RIMTAGFFADTFRGLMMGTGNGVEYFLGYFSLRGDGISDRQPIRDCTKEEVRAMAA---- 205 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 ++GL P ++ + P+A L P QTD+ L Sbjct: 206 ---SAGL-------PEDLVHRVPTAGLWPGQTDEGEL 232 >gi|86159210|ref|YP_465995.1| NAD synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775721|gb|ABC82558.1| NH(3)-dependent NAD(+) synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 323 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 49/195 (25%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY---DV 352 ++G+SGGIDS++ AA+ V ALGK+ V +M+P + +S +L A+ LG ++ DV Sbjct: 36 VVGMSGGIDSSVTAALCVRALGKDRVFGLMMPERDSSGDALRLGRMLAEHLGIRFAVEDV 95 Query: 353 LPIHDLVNHFFSLM-------------------------------SQFLQEEPSG----- 376 P D + + + + ++P G Sbjct: 96 APALDGLGCYARQLEAIRMVVPEYGPGWKCKLTLPSILDADRLNITALTVQDPEGNQRTQ 155 Query: 377 ----------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + A N + R R + ++ + T N E G+ GD + F Sbjct: 156 RMTAAAYLQMVAATNFKQRTRKMMEYYHADRLNYAVAGTPNLLEYDQGFFVKQGDGAADF 215 Query: 427 NPLKDLYKTQVFQLA 441 P+ LYKTQV+ LA Sbjct: 216 KPIAHLYKTQVYALA 230 >gi|126461244|ref|YP_001042358.1| NAD+ synthetase [Rhodobacter sphaeroides ATCC 17029] gi|126102908|gb|ABN75586.1| NAD+ synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 514 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 23/221 (10%) Query: 251 LSQW--NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 LS W + + +++ ++ EA V L +Y + +IG+SGG+DSAL Sbjct: 29 LSPWFAARLEEQVEKGLFLSPEDLEATGARLVEELVEYRTRTQVSTAVIGMSGGVDSALT 88 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI----HDLVNHFFS 364 AA+ A G +V LP + ++ ACA ALG ++ L + + H Sbjct: 89 AAL-FKAAGW-HVVGHTLPIEQDPNETDRGIEACA-ALGIEHRPLDLSGAYEAALVHLGE 145 Query: 365 LMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 L L E P+ N+++R+R L ++ ++ T N SE++ G+ TL+GD+ Sbjct: 146 LDPDLLSSDETPARTRRGNLRARLRMMTLYDQAHRLGGLVAGTDNFSELTAGFWTLHGDV 205 Query: 423 SGGFNPLKDLYKT-QVFQL--------ASWRNSHGITSGLG 454 G P++ L K+ +V L A+WR T GLG Sbjct: 206 -GDLAPVQSLLKSWEVPWLARAHRVPEATWRAMP--TDGLG 243 >gi|92112196|ref|YP_572124.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chromohalobacter salexigens DSM 3043] gi|91795286|gb|ABE57425.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chromohalobacter salexigens DSM 3043] Length = 269 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 16/181 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQL GDIA N+++ +A+ + LI+F E ++G+ V ++ Sbjct: 1 MQIALAQLAGREGDIAYNLSRTLACLRDADAE-TSLIVFPETHLTGFAEPGHVEDRALAL 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ L + + + + VGF +D EGV N+ V++ + IA+R Y + H Sbjct: 60 E-GPELNALVTASREQDTALAVGFLERDAEGVFNTTVLITPEDGIALR-------YRKAH 111 Query: 125 ----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS--P 178 E++ G+ + +R +++G+LIC D+ + + L + G + L N + P Sbjct: 112 LWPDERQLVGEGHRVGCVEWRGLQVGLLICYDL-EFPEPARALGQLGCDLLLVTNGNMDP 170 Query: 179 Y 179 Y Sbjct: 171 Y 171 >gi|139438975|ref|ZP_01772435.1| Hypothetical protein COLAER_01441 [Collinsella aerofaciens ATCC 25986] gi|133775686|gb|EBA39506.1| Hypothetical protein COLAER_01441 [Collinsella aerofaciens ATCC 25986] Length = 661 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 132/579 (22%), Positives = 229/579 (39%), Gaps = 70/579 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ++ +GDI G + A+ +G ++ G P LV F Sbjct: 1 MKLALAQIDMRLGDIEGICGRIEDQARLAHERGARVLCVPAPLFMGTLPGGLVGAADF-- 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAG---------NIIAVRDKI 115 HD AG+ G + QE L+ + I+ A + + ++D Sbjct: 59 ------------EHDMLAGLT-GVAERIQE--LDMICIVPAAVSFEGQPLLDYMMLKDGH 103 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL--FS 173 +P S +R P VF + I + D+ + + G + + F Sbjct: 104 VVPARSSIALQRGGNGDARWAPPVFDVDGVRIAVIFDLDRELEMLP----TGVDLIVYFQ 159 Query: 174 LNASPYYHNKLKKRHEIVTGQ----ISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 NA + + +G S + + VG DE ++ G SF D ++ Sbjct: 160 FNAFDMTDRETAAIAAVRSGAYRKIASKRSVWFACMAPVGAYDESVYTGGSFVLDDCGRV 219 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQ 288 Q F E + E L D+ +P + EE + A VL++RD + Sbjct: 220 VAQAPCFEESLLVQEIQRGVML--------DALEDHELPEFRSEEWLWQALVLAVRDNAR 271 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY-KYTSPQSLEDAAACAKALG 347 + ++ L G + S+L AA+AVDALG NV ++L + +P E AA A+ Sbjct: 272 ARGTSRAVVALEGDLPSSLLAALAVDALGPRNVIGLVLGRNRIFTPAQEEAEAARCAAVR 331 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 + L I V + L + S AE ++SR G +L + AM L+ + Sbjct: 332 AIAERLHIRT-VERDAPDAAPVLDRDVSAGDAERLRSRTLGLMLEDTALELGAMALSPLS 390 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 K+E ++ L G G + P D+Y + + +A RN TS + P E++ + +E Sbjct: 391 KTEYALAAPALCGGYQGDYAPFGDVYLSTLEFVARVRNR---TSAVVP-QELVTLNAVED 446 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYND------- 512 L + + P +LD + + E ES ++ ++ ++D Sbjct: 447 CMERVLARALSTLDG--PVDMLDRAAQLLGGLEPGEVDGTLESHVDRNRPFDDIPMAAGK 504 Query: 513 -ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 E + L+ E RRQ P ++A+SF +R +P Sbjct: 505 PEACSLLLMLVRQGEAARRQLPTAPIVSARSF-VERAWP 542 >gi|194336133|ref|YP_002017927.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pelodictyon phaeoclathratiforme BU-1] gi|194308610|gb|ACF43310.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pelodictyon phaeoclathratiforme BU-1] Length = 291 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 22/289 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA+ Q + D N+AKA EA +G +I ELF++ Y + + SF Sbjct: 6 VPIALVQAS-CTSDPTENLAKACNKIREAAARGARIICLQELFMTRYFCQTENYT-SFDY 63 Query: 65 A---CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPN 119 A ++ ++ + I+ F G+ N+ V+LDA G+ + K+++P+ Sbjct: 64 AEPVPGTSTLLMQELARELEVVIIASFFEIRARGLYHNTAVVLDADGSYLGKYRKMHIPD 123 Query: 120 YSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F+EK F G + R +G+LIC D W + +GAE LF A Sbjct: 124 DPGFYEKFYFTPGDLGYKVFKTRYATIGVLICWDQWY-PEAARLTALKGAEILFYPTAIG 182 Query: 179 YYHNKLK------KRHEIVTGQISHVHLPIIYV---NQVGGQDELIFDGASFCFDGQQQL 229 + +++ +R +T Q SH ++V N+VG +DEL F G SF D Q+ Sbjct: 183 WATDEISADVRRSQREAWMTIQRSHAIANGVFVAAANRVGIEDELEFWGNSFVCDPFGQI 242 Query: 230 AFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSDDSASTMYIPLQEEEAD 275 + H E + + S W ++ D T Y LQ+ D Sbjct: 243 VEEAAHQDETILLANCDRSRIGFYRSHWPFLRDRRIET-YSELQKRYLD 290 >gi|313497519|gb|ADR58885.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida BIRD-1] Length = 298 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 24/235 (10%) Query: 2 LKKLKIAIAQLNPVVG------DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED 55 + ++IA+ Q +P VG +++ +A ARRA R+G +LI+ EL +GY Sbjct: 8 VSPVRIAVIQYDPQVGLEHCESNVSRGLALARRA----AREGANLIVLPELANTGYTFNS 63 Query: 56 LVFKKSFIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 S Q + T + GF +D + +S V+ ++ Sbjct: 64 RAEAYSHAQVLQDGPCLKTWADFARQYQVYLAAGFAERDGLKLYDSAVLFGPEGLLGHYR 123 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K +L N EK F G P+ I R+G+LIC DIW + + + QGA+ + Sbjct: 124 KAHLWN----QEKLWFTPGNLGFPVFETPIGRIGLLICWDIWF-PEVPRVMAAQGADIIC 178 Query: 173 SLN-----ASPYYHNKLKKRHEIVTGQISHV-HLPIIYVNQVGGQDELIFDGASF 221 SLN P + + + +T +HV ++ I N+VG + F G S Sbjct: 179 SLNNWVWTPPPLFDDAGRCMASYLTMTAAHVNNVYIAAANRVGSERGGRFLGCSL 233 >gi|257792789|ref|YP_003183395.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Eggerthella lenta DSM 2243] gi|317489070|ref|ZP_07947595.1| carbon-nitrogen hydrolase [Eggerthella sp. 1_3_56FAA] gi|325831011|ref|ZP_08164335.1| hydrolase, carbon-nitrogen family [Eggerthella sp. HGA1] gi|257476686|gb|ACV57006.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Eggerthella lenta DSM 2243] gi|316911802|gb|EFV33386.1| carbon-nitrogen hydrolase [Eggerthella sp. 1_3_56FAA] gi|325486932|gb|EGC89378.1| hydrolase, carbon-nitrogen family [Eggerthella sp. HGA1] Length = 280 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 20/225 (8%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + + +A+ Q V+ D A N KA R EA +G DL++ ELF +GY +L Sbjct: 11 RTVHLALVQFESVLCDPAANTQKACRMIAEAAAEGADLVVLPELFSTGY---ELNIVGPH 67 Query: 63 IQACSSAID-----TLKSDTHDGGAGIVVGFPRQ-DQEGV-LNSVVILD-AGNIIAVRDK 114 + + +D L+ G +V G D GV NS V++D G ++ DK Sbjct: 68 VPELAEPVDGPTVRALQDAARAGNCYVVAGLALAYDMAGVPFNSSVVIDRQGELLGTYDK 127 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +L F+ F SG + P+ D R+G++IC D+ + + L QGA+ + Sbjct: 128 QHLWALERFY----FRSG-CDCPVFDTDFGRIGVMICYDM-GFPEVARMLALQGADLI-- 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 L S + + + + VN+ G +D+L+ G Sbjct: 180 LCPSAWCQEDMDVWDVNAPARALENTAFVAAVNRYGVEDQLVMPG 224 >gi|320165921|gb|EFW42820.1| glutamine-dependent NAD(+) synthetase [Capsaspora owczarzaki ATCC 30864] Length = 797 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 129/611 (21%), Positives = 228/611 (37%), Gaps = 145/611 (23%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A+ LN D GN+A+ + E+A ++G EL ISGY D + Sbjct: 1 MAHLVTVAVCALNQWAMDFDGNLARILTSIEQAKQRGATFRSGPELEISGYGCNDHFLES 60 Query: 61 -SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +F+ + S + LKS VG P + N V+ G ++ +R K+ L Sbjct: 61 DTFLHSVQSLAELLKSPVCRD-ILCDVGMPILHKNVRYNCRVLFFNGKVLLIRPKMFLAM 119 Query: 120 YSEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIW 154 + E R F I+G P + D +G+ CE+++ Sbjct: 120 DGNYREGRWFTPWTAQRETEDFYLPSIIQAITGQITVPFGDAVVSTLDTCVGVETCEELF 179 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV---TGQISHVHLPIIYVNQVGGQ 211 ++ + G E + + + S + KL R +++ +G++ +++ Y NQ G Sbjct: 180 TPNSPHIQMGLDGVEIITNGSGSHHELRKLHTRLDLIRSASGKLGGIYM---YSNQKGCD 236 Query: 212 DELIF---------------DGASFCFDGQQQL-------------AFQMKHFSEQNFMT 243 E ++ GA F D + + A +M ++ Sbjct: 237 GERVYYDGCAMIAVNGQIVAQGAQFSLDDVEVVTATIDLEDVRSYRASKMSWGAQATNTP 296 Query: 244 EWH---YDQQLSQWN------YMSDDSASTMYIPLQEEEADYN-ACVLSLRDYVQKNNFH 293 +H D +L+ + + + ++ I EE AC L DY++++ Sbjct: 297 SYHRFFLDSRLTAQSPSLFPENLPSEPLESLRIHTPSEEISLGPACW--LWDYLRRSGMG 354 Query: 294 KVIIGLSGGIDSALCAAI-------AVDALGKENVQTIM--------LPYKYTSPQSLED 338 + LSGGIDS+ A I VD + N Q + Y T P L + Sbjct: 355 GFFLPLSGGIDSSSTACIVACMCKLVVDNVAANNAQVLQDVRRICRDPQYTPTDPAELTN 414 Query: 339 --------------------AAACAKALGCKYDVLPIH-----DLVNHFFSLMSQFLQE- 372 A+A A+ LG + L I+ V F++ ++ + + Sbjct: 415 RLLHTCYMGTANSSNETRDRASALAQQLGSYH--LSINFDAAVAAVLAVFTIATKMIPKF 472 Query: 373 ------EPSGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTL 418 + +NIQ+R+R +L+ + ++L L ++N E GY T Sbjct: 473 RTYGGSSTENLALQNIQARLRMVLAYLFAQLLLWVRGREGSLLVLGSANVDESIRGYFTK 532 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWR-NSHGITSGLGPLTEVIPPSILEKSPSAELRP-- 475 Y + NP+ + KT + + +HG TS G I + P+AEL P Sbjct: 533 YDCSAADINPIGGISKTDLRGFIRFVIQTHGWTSLNG---------IFDAPPTAELEPIT 583 Query: 476 ---HQTDQESL 483 QTD+ + Sbjct: 584 ASYTQTDEADM 594 >gi|330970876|gb|EGH70942.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 264 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ D++GN+ + + + A +QG +++ E+F+SGY + Sbjct: 1 MRVALYQCPPLPLDVSGNLTRLEQQAQAAAKQGSQVLICPEMFLSGYNIGAQAVGELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P + +G + N+V ++D+ L NY + Sbjct: 61 QNGPAATRIAAIAQASGIAILYGYPERAGDGQIYNAVQLIDS-------QGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H +K F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDKSMFAAGDDHYPVVELNGWRLGLLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + + R H ++Y N G + + + G +S C DG + L Sbjct: 173 MLPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLSSLCAPDGSRPL 224 >gi|328551985|gb|AEB22477.1| NAD synthetase [Bacillus amyloliquefaciens TA208] Length = 272 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 45/266 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSLE 337 L+ Y++K ++G+SGG DS L A +A +++ +E N + I + + + Q + Sbjct: 30 LKQYLKKTGAKGFVLGISGGQDSTLAGRLAQMAAESIREEGGNAEFIAVRLPHGTQQDED 89 Query: 338 DAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DA K + YD+ P V+ F + ++ S N+++R+R A Sbjct: 90 DAQMALKFIKPDKSWTYDIKPA---VSAFADQYKKETGDQLSDFNKGNVKARMRMIAQYA 146 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + +++ T + +E G+ T YGD PL L K Q +L Sbjct: 147 VGGQEGLLVIGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRRL------------- 193 Query: 454 GPLTEVIPPSILE-KSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQ 508 L E+ P L K P+A+L +P QTD+ L Y +DD ++ + Sbjct: 194 --LEELGAPERLYLKLPTADLLDDKPQQTDETELGITYNDIDDYLE------------GK 239 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPV 534 + + E + +E SE+K RQ P Sbjct: 240 DVSSEVIEALEKRYLSSEHK-RQVPA 264 >gi|254456758|ref|ZP_05070186.1| N-carbamoylputrescine amidase [Campylobacterales bacterium GD 1] gi|207085550|gb|EDZ62834.1| N-carbamoylputrescine amidase [Campylobacterales bacterium GD 1] Length = 281 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 15/233 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK-SFI 63 +K++ Q+ + D N++KA E++ G +IL ELF S Y +D+ K S Sbjct: 2 VKVSAIQMQ-MSDDRDSNVSKAEALVRESHANGAQIILLPELFSSLYFCKDMDEKYFSLA 60 Query: 64 QAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 Q +S I+ + I+V + + +E NS+V++DA G I+ K ++P+ Sbjct: 61 QELKNNSLIERFSQLAKELSVVILVSYFEKSEEDYFNSLVVVDASGKIMDNYRKTHIPDG 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF---SLNA 176 + EK F G + + ++GI IC D W + L GAE +F ++ + Sbjct: 121 PGYEEKFYFKPGDTGFKVYDTAYGKIGIGICWDQW-FCETARALTLMGAEIIFYPTAIGS 179 Query: 177 SPYYHNKLKKRHEIV-TGQISHVHLPIIYVN----QVGGQDELIFDGASFCFD 224 P H K+ + V G + +P++ N +VG L F G+SF D Sbjct: 180 EPEIHLDSKEHWQRVQMGHAATNTVPVVVANRIGEEVGESCSLTFYGSSFITD 232 >gi|217965118|ref|YP_002350796.1| hydrolase, carbon-nitrogen family [Listeria monocytogenes HCC23] gi|217334388|gb|ACK40182.1| hydrolase, carbon-nitrogen family [Listeria monocytogenes HCC23] gi|307570322|emb|CAR83501.1| hydrolase, carbon-nitrogen family [Listeria monocytogenes L99] Length = 296 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 24/206 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + EA+++G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIKYIREAHKKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I+A S+ + TLK + GI + + ++ + N+ +I+D Sbjct: 61 PLATGFGAERFKWLNEAIEADSAYVSTLKKLAKELQIGICATYLSKTEQKIQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR 187 +GAE + NA +P N+L R Sbjct: 177 LKGAEIILVPNACDMNPARLNQLNSR 202 >gi|170723978|ref|YP_001751666.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida W619] gi|169761981|gb|ACA75297.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida W619] Length = 264 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 30/258 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P D+ GN+ + R + A +G L++ E+F+SGY L + + Sbjct: 1 MRIALFQGKPNPLDVPGNLQRLRHQAQLAAERGAQLLVCPEMFLSGYNI-GLAQVERLAE 59 Query: 65 A--CSSAIDTLK-SDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 A SA++ ++ + H IV G+P R D + NSV ++DA +L NY Sbjct: 60 ADDGPSAMEVVEIAQAHR--IAIVYGYPERTDDGAIYNSVQLIDA-------HGRSLCNY 110 Query: 121 SEFH-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 + H ++ F G + P+V ++G+LIC DI N + L GAE + Sbjct: 111 RKTHLFGELDRSMFSPGADHFPVVELEGWKVGLLICYDIEFPEN-ARRLALDGAELILVP 169 Query: 173 SLNASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 + N +PY + ++ R Q ++Y N G + ++ + G S L Sbjct: 170 TANMTPYDFVCQVTVRSRAQENQCY-----LVYANYCGAEGDIQYCGQSSIIGPDGSL-L 223 Query: 232 QMKHFSEQNFMTEWHYDQ 249 M E + E ++Q Sbjct: 224 AMAGRDECQLLAELQHEQ 241 >gi|229162973|ref|ZP_04290929.1| Carbon-nitrogen hydrolase [Bacillus cereus R309803] gi|228620379|gb|EEK77249.1| Carbon-nitrogen hydrolase [Bacillus cereus R309803] Length = 280 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 13/225 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKS 61 K+K+A Q++ V G++ NI A+ EA ++ D+I+ EL+ +GY L + K Sbjct: 21 KMKVACIQMDIVFGNVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADKD 80 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 ++ +TLK + G IV G +Q ++GV N++ +++ G+++ K++L Sbjct: 81 GVE----TKETLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNKEGDLVNEYSKVHL-- 134 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + E + ++G S D+ IC DI + H + GAE LF + P Sbjct: 135 FQLMDEHKYLVAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAR-GAEVLFVVAEWPL 193 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 194 V--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|229085004|ref|ZP_04217256.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock3-44] gi|228698320|gb|EEL51053.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock3-44] Length = 272 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 36/228 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQS 335 L+DY++K ++G+SGG DS L A +AV+ + E + LPYK Q Sbjct: 30 LKDYLRKTGAKGFVLGISGGQDSTLAGRLAQLAVEEVRNEGCNATFIAVRLPYKV---QK 86 Query: 336 LEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 ED A A +D+ P V+ F + ++ L E + N+++R+R Sbjct: 87 DEDDAQLALQFIKPDQSIAFDIAPA---VDAFSNQYNELLGESLTDFNKGNVKARLRMVT 143 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A+ +++ T + +E G+ T +GD PL L K R + Sbjct: 144 QYAIGGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGKALL 194 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 195 QELGA-----EERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|313679250|ref|YP_004056989.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Oceanithermus profundus DSM 14977] gi|313151965|gb|ADR35816.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Oceanithermus profundus DSM 14977] Length = 286 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 8/179 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ AI QL P G I N+ ++A +G+D+ + E + +GY + V + Sbjct: 2 VRHAILQLKPEKGRIGRNLEHLQQALLGLRDEGVDVAVVPEAYPTGYFLQGGV--RELAL 59 Query: 65 ACSSAIDTL---KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN--IIAVRDKINLPN 119 + D L + + +V+GF +D N+ L+ G ++ + KI LP Sbjct: 60 EAAELEDRLGRWHAAHYREPLDLVIGFYERDGGSYYNAAAYLELGGRGLVHLHRKIFLPT 119 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 Y F E+R G+ R R +LICED W ++ + QGAE ++ +ASP Sbjct: 120 YGVFDEERFLDRGHELASFATRFGRAALLICEDFW-HTVTATTVALQGAEIIYVPSASP 177 >gi|294498967|ref|YP_003562667.1| NAD+ synthetase [Bacillus megaterium QM B1551] gi|294348904|gb|ADE69233.1| NAD+ synthetase [Bacillus megaterium QM B1551] Length = 270 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 112/277 (40%), Gaps = 41/277 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTI 324 P QE A V L+ Y++ N ++G+SGG DS+L A IAVD L KE + Sbjct: 17 PAQE----IRARVDFLKSYLKSANAKGFVLGISGGQDSSLAGRLAQIAVDELRKEEYEAK 72 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYD---VLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + + ++A A A K + I + V F S + S N Sbjct: 73 FVAVRLPHGTQHDEADAKASLEFIKPNETYTFNIKNTVEAFESSFTGATDIALSDFHKGN 132 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++R R + A+ + +++ T + +E G+ T YGD PL L K Sbjct: 133 VKARTRMIVQYAIGGENGLLVIGTDHAAEAVTGFFTKYGDGGADVLPLTGLTK------- 185 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIV 497 R + LG + EK P+A+L P Q+D+ L Y LDD ++ Sbjct: 186 --RQGKALLKELGA-----DKRLYEKVPTADLLDNSPGQSDETELGISYDELDDYLEGKE 238 Query: 498 ENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 ++E+ +Q Y R EH +RQ P Sbjct: 239 VSQEAAEKIEQRY-----RITEH--------KRQLPA 262 >gi|146305378|ref|YP_001185843.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas mendocina ymp] gi|145573579|gb|ABP83111.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas mendocina ymp] Length = 294 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 17/250 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDL 56 M + + +A Q+ D A NIA A R +A QG +IL ELF + Y P D Sbjct: 1 MSRIVTVAATQMA-CSWDTAANIANAERLVRQAAAQGAQIILIQELFETPYFCQKPNADF 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + + + AI + + + + F + NS+ I+DA G+ + + K Sbjct: 60 TQLATTAEE-NPAILHFRKVAAELKVVLPISFFERAGRARFNSIAIIDADGSNLGIYRKS 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ +HEK F G + + R+G+ IC D W + + GAE LF Sbjct: 119 HIPDGPGYHEKYYFNPGDTGFKVWDTAYARIGVGICWDQW-FPECARSMALMGAEILFYP 177 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 ++ + P+ + H + G +P++ N++G +++ DG F G + Sbjct: 178 TAIGSEPHDPTISSRDHWQRVQQGHAGANLMPLVASNRIGREEQ---DGYDITFYGSSFI 234 Query: 230 AFQMKHFSEQ 239 A Q E+ Sbjct: 235 ANQFGEKVEE 244 >gi|297267217|ref|XP_001098992.2| PREDICTED: glutamine-dependent NAD(+) synthetase isoform 2 [Macaca mulatta] Length = 699 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 126/601 (20%), Positives = 209/601 (34%), Gaps = 135/601 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R K+ L N Sbjct: 61 DTLLHSFQVLAALLESPVTQDIICDVGMPVMHRNVRYNCRVIFLNRKILLIRPKMALANE 120 Query: 121 SEFHEKRTF-------------------------ISGYSNDPIVFRDIRLGILICEDIWK 155 + E R F + + + + D +G ICE++W Sbjct: 121 GNYRELRWFTPWSRSRHTEEYLLPRMIQDLTKQETAPFGDAVLATWDTCIGSEICEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + + S + K R ++VT S + NQ G D L Sbjct: 181 PHSPHIDMGLDGVEIITNASGSHHVLRKANTRVDLVTMATSKNGGIYLLANQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQM---------KHFSEQN----------- 240 +DG + F D + L + S +N Sbjct: 241 YYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRASPYPR 300 Query: 241 ----FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F H D + +W Y S +EE + AC L D+++++ Sbjct: 301 VKVDFALSCHEDLLAPVSEPIEWKYHSP----------EEEISLGPACWLW--DFLRRSQ 348 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGK-------------ENVQTIMLPYKYTSPQSLED 338 ++ LSGG+DSA A + + +V+TI+ YT PQ D Sbjct: 349 QGGFLLPLSGGVDSAATACLVYSMCCQVCKSVRSGNQEVLADVRTIVNQISYT-PQDPRD 407 Query: 339 AAACAKALGCKYDVLP----------------IHDLVNHFFSLMSQFLQEE--------- 373 C + L Y I + + ++ + L E Sbjct: 408 --LCGRILTTCYMASKNSSQETCTRARELAQQIGRWILYVRTVEGEHLSREERLGSIWNV 465 Query: 374 PSGIVA---ENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGDM 422 PSG + +N+Q+RIR + LS S+ ++L ++N E +GY T Y Sbjct: 466 PSGALGQSLQNVQARIRMVLAYLFAQLSLWSRGIRGGLLVLGSANVDESLLGYLTKYDCS 525 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 S NP+ + KT + + + L + V P+ E P A+ + QTD+E Sbjct: 526 SADINPIGGISKTDLRAFVQFCIERFQLTALQSI--VSAPATAELEPLADGQVSQTDEED 583 Query: 483 L 483 + Sbjct: 584 M 584 >gi|295704291|ref|YP_003597366.1| NAD+ synthetase [Bacillus megaterium DSM 319] gi|294801950|gb|ADF39016.1| NAD+ synthetase [Bacillus megaterium DSM 319] Length = 273 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 112/277 (40%), Gaps = 41/277 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTI 324 P QE A V L+ Y++ N ++G+SGG DS+L A IAVD L KE + Sbjct: 20 PAQE----IRARVDFLKSYLKSANAKGFVLGISGGQDSSLAGRLAQIAVDELRKEEYEAK 75 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYD---VLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + + ++A A A K + I + V F S + S N Sbjct: 76 FVAVRLPHGTQHDEADAKASLEFIKPNETYTFNIKNTVEAFESSFTGATDIALSDFHKGN 135 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++R R + A+ + +++ T + +E G+ T YGD PL L K Sbjct: 136 VKARTRMIVQYAIGGENGLLVIGTDHAAEAVTGFFTKYGDGGADVLPLTGLTK------- 188 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIV 497 R + LG + EK P+A+L P Q+D+ L Y LDD ++ Sbjct: 189 --RQGKALLKELGA-----DKRLYEKVPTADLLDNSPGQSDETELGISYDELDDYLEGKE 241 Query: 498 ENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 ++E+ +Q Y R EH +RQ P Sbjct: 242 VSQEAAEKIEQRY-----RITEH--------KRQLPA 265 >gi|332078249|emb|CCA65535.1| Hypothetical protein C24F3.4b [Caenorhabditis elegans] Length = 632 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 107/503 (21%), Positives = 189/503 (37%), Gaps = 119/503 (23%) Query: 84 IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG----------- 132 +V G P + + + N L G ++ +R K+ L + + + E R F+ Sbjct: 17 VVTGLPTRFRGLLYNCAAALRNGKLLFIRAKMGLADDNVYRESRWFVKWTETFKHYQMPL 76 Query: 133 -----YSNDPIVFRD--------IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + + + F D +R+G ICE++W + L +QG + + + + S + Sbjct: 77 NSDIHFDQETVPFGDGILESSDNVRIGFEICEELWSARSTNVRLAEQGVDIMCNGSGSHH 136 Query: 180 YHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCFDGQQQLA----FQM 233 K R ++++ G + V +Y NQ G D + +DGAS LA F + Sbjct: 137 ILGKSNYRINQLILGSSAKVGGVYLYANQRGCDGDRVYYDGASSVAQNGDLLAQIHQFDI 196 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSAS--TMYIPLQEEEA-----DYN----ACVLS 282 + S + + + +Q +AS +P++ + YN A + + Sbjct: 197 EDTSVVSAVVDLSDNQCFRHMKSSDRGNASDQVTVVPIRFDGKMTGGIKYNEKSTAPIHN 256 Query: 283 LRD-------------------YVQKNNFHKVIIGLSGGIDSA------------LCAAI 311 + D Y++++ I LSGG DS+ +C AI Sbjct: 257 VEDLQLSPIAELCHGPPAYLWTYLRRSGMAGYFIPLSGGQDSSAVAAMVRLMCEKVCGAI 316 Query: 312 A----VDA-------LGKENV--------QTIMLPYKYTSPQSLEDAAACAKALGCKYD- 351 D LG + V ++ S S ++ CA+ L + Sbjct: 317 KRRRETDGGDDPAYYLGGKKVGEDPAELCNQVLFTCYMASEHSSDETRQCAEGLAKNVNS 376 Query: 352 ----------VLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNI-----LMALS 395 V I + N + M F + +A +NIQ+RIR + +AL Sbjct: 377 SHCGIFIDTIVTSILKVFNVAYGFMPSFQSPDNRETMALQNIQARIRMVLSYLFAQLALV 436 Query: 396 NHSKA---MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 +H + ++L T+N E VGY T Y S NP+ + K + Q G Sbjct: 437 SHKRPGGLLVLGTANVDESLVGYLTKYDCSSADINPIGSVSKRDLRQFLEIAYEK---YG 493 Query: 453 LGPLTEVIPPSILEKSPSAELRP 475 + L VI + +P+AEL+P Sbjct: 494 MAALRCVI-----DSTPTAELKP 511 >gi|296081697|emb|CBI20702.3| unnamed protein product [Vitis vinifera] Length = 307 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 17/200 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L K KI + QL+ V D NIA AR+A EEA +G L+L E++ S Y + Sbjct: 23 LSKFKIGLCQLS-VTADKERNIAHARKAIEEAVEKGAQLVLLPEIWNSPYSNDSFPVYAE 81 Query: 62 FIQACSSA---IDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDK--- 114 I A S A L +H IV G P + + + N+ + + + + + Sbjct: 82 DIDAGSDASPSTAMLSEVSHALKITIVGGSIPERCGDQLYNTCCVFGSDGKLKAKHRKIH 141 Query: 115 ---INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 IN+P F E +T +G S + R+GI IC DI + S + +GA + Sbjct: 142 LFDINIPGKITFMESKTLTAGGSPTIVDTEVGRIGIGICYDI-RFSELAMLYAARGAHLI 200 Query: 172 -----FSLNASPYYHNKLKK 186 F++ P + L++ Sbjct: 201 CYPGAFNMTTGPLHWELLQR 220 >gi|227513987|ref|ZP_03944036.1| NAD(+) synthase [Lactobacillus fermentum ATCC 14931] gi|260663251|ref|ZP_05864143.1| NAD+ synthetase [Lactobacillus fermentum 28-3-CHN] gi|227087631|gb|EEI22943.1| NAD(+) synthase [Lactobacillus fermentum ATCC 14931] gi|260552443|gb|EEX25494.1| NAD+ synthetase [Lactobacillus fermentum 28-3-CHN] Length = 276 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 34/244 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKE 319 IP + + + + L+DY+++ +++G+SGG DSAL A +AV+ L G E Sbjct: 15 IPTIDPQVEVRRRIDFLKDYLKQTKMATLVLGISGGQDSALAGRLAQLAVEELRKESGSE 74 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 + Q I + Y DA K ++ P D + + + Sbjct: 75 DYQFIAVRLPYGEQADESDAMMAIDDFIHPDRVVKVNIKPATDAMVMTLEAAGTKISDFN 134 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 G NI++R R + A++ ++ T + +E G+ T YGD PL L K Sbjct: 135 KG----NIKARERMIVQYAIAGEYHGAVVGTDHAAEAVTGFYTKYGDGGADVTPLSQLDK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P + +K+P+A+L RP D+++L Y +D Sbjct: 191 ---------RQGRALLEYLGA-----PEKLYQKTPTADLEEDRPALPDEQALGVTYKDID 236 Query: 491 DIIK 494 D ++ Sbjct: 237 DFLE 240 >gi|119476936|ref|ZP_01617217.1| NAD synthetase [marine gamma proteobacterium HTCC2143] gi|119449743|gb|EAW30980.1| NAD synthetase [marine gamma proteobacterium HTCC2143] Length = 277 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 48/273 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE-D 338 ++ + + +++G+SGGIDSA+C +A A+ + N Q PYK+ + P ++ D Sbjct: 29 IKGQLATSGIKTLVLGISGGIDSAVCGRLAQLAVNQLNQQDDSSPYKFVAVRLPYGVQLD 88 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQ--FLQEEPSGIVAE----------NIQSRI 386 ++ IH V + Q + SG++ E N+++R Sbjct: 89 EHDAQASIDFIQPSESIHANVQQGADGIHQQAMTALQASGLLTESDALRDFAKGNVKART 148 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + ++ ++L T + +E G+ T +GD + PL L K QV Q Sbjct: 149 RMAVQYDIAALLNGLVLGTDHSAENITGFFTKWGDGACDLAPLFGLSKRQVKQ------- 201 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIK-RIVENEE 501 + + LG +P ++ K+P+A+L P + D+++L Y LDD ++ R VE + Sbjct: 202 --VGASLG-----VPEQLIHKTPTADLESLAPQKADEQTLGVTYDELDDYLEGRPVEKQV 254 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 + ++E + +++KR+ P Sbjct: 255 AL-------------HIESIYTKTQHKRQPIPT 274 >gi|225429638|ref|XP_002279687.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 364 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 17/200 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L K KI + QL+ V D NIA AR+A EEA +G L+L E++ S Y + Sbjct: 80 LSKFKIGLCQLS-VTADKERNIAHARKAIEEAVEKGAQLVLLPEIWNSPYSNDSFPVYAE 138 Query: 62 FIQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDK--- 114 I A S A + L +H IV G P + + + N+ + + + + + Sbjct: 139 DIDAGSDASPSTAMLSEVSHALKITIVGGSIPERCGDQLYNTCCVFGSDGKLKAKHRKIH 198 Query: 115 ---INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 IN+P F E +T +G S + R+GI IC DI + S + +GA + Sbjct: 199 LFDINIPGKITFMESKTLTAGGSPTIVDTEVGRIGIGICYDI-RFSELAMLYAARGAHLI 257 Query: 172 -----FSLNASPYYHNKLKK 186 F++ P + L++ Sbjct: 258 CYPGAFNMTTGPLHWELLQR 277 >gi|254823940|ref|ZP_05228941.1| hydrolase [Listeria monocytogenes FSL J1-194] gi|255521182|ref|ZP_05388419.1| hydrolase, carbon-nitrogen family protein [Listeria monocytogenes FSL J1-175] gi|293593166|gb|EFG00927.1| hydrolase [Listeria monocytogenes FSL J1-194] Length = 296 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 29/269 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I+A S+ + TLK + GI + + ++ + N+ +I+D Sbjct: 61 PLATGFGAERFKWLNEAIEADSAYVSTLKKLAKELQIGICATYLSKTEQKIQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +GAE + NA +P N+L R E + G ++ + P + ++FD Sbjct: 177 LKGAEIILVPNACDINPARLNQLNSRAFENMVG-VAMANYPGEKWGRSTAFSPIVFDENG 235 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D + + + SE F+ E++ D+ Sbjct: 236 ---DYRDNTIIETEDVSEGIFIAEFNLDE 261 >gi|184154720|ref|YP_001843060.1| NAD synthetase [Lactobacillus fermentum IFO 3956] gi|238692943|sp|B2GA98|NADE_LACF3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|183226064|dbj|BAG26580.1| NAD synthase [Lactobacillus fermentum IFO 3956] Length = 276 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 34/244 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKE 319 IP + + + + L+DY+++ +++G+SGG DSAL A +AV+ L G E Sbjct: 15 IPTIDPQVEVRRRIDFLKDYLKQTKMATLVLGISGGQDSALAGRLAQLAVEELRKESGSE 74 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 + Q I + Y DA K ++ P D + + + Sbjct: 75 DYQFIAVRLPYGEQADESDAMMAIDDFIHPDRVVKVNIKPATDAMVMTLEAAGTKISDFN 134 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 G NI++R R + A++ ++ T + +E G+ T YGD PL L K Sbjct: 135 KG----NIKARERMIVQYAIAGEYHGAVVGTDHAAEAVTGFYTKYGDGGADVTPLSQLDK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P + +K+P+A+L RP D+++L Y +D Sbjct: 191 ---------RQGRALLEYLGA-----PEKLYQKTPTADLEEDRPALPDEQALGVTYKDID 236 Query: 491 DIIK 494 D ++ Sbjct: 237 DFLE 240 >gi|75267500|sp|Q9XGI9|AGUB_SOLLC RecName: Full=N-carbamoylputrescine amidase gi|5262946|emb|CAB45873.1| beta-alanine synthase [Solanum lycopersicum] Length = 300 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 19/222 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSFIQACSSAIDTLK 74 D++ N+A A R A+++G ++IL ELF Y ++ F ++ I ++ Sbjct: 20 DVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFFHRAKPYPGHPTIVRMQ 79 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGY 133 + + G I V F + NSV I+DA G + + K ++P+ + EK F G Sbjct: 80 NLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKYYFNPGD 139 Query: 134 SNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRH- 188 + + + ++G+ IC D W + + QGAE LF ++ + P + H Sbjct: 140 TGFKVFQTKYAKIGVAICWDQW-FPEAARAMALQGAEVLFYPTAIGSEPQDDGLDSRDHW 198 Query: 189 -EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 ++ G +P++ N++G G E+ F G SF Sbjct: 199 RRVMQGHAGANVVPLVASNRIGKEIIETEHGNSEITFYGYSF 240 >gi|332257969|ref|XP_003278076.1| PREDICTED: glutamine-dependent NAD(+) synthetase [Nomascus leucogenys] Length = 750 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 127/606 (20%), Positives = 208/606 (34%), Gaps = 138/606 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 45 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYES 104 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R K+ L N Sbjct: 105 DTLLHSFQVLAALLESPVTQDIICDVGMPIMHRNVRYNCRVIFLNRKILLIRPKMALANE 164 Query: 121 SEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWK 155 + E R F + + +V D +G ICE++W Sbjct: 165 GNYRELRWFTPWSRSRHTEEYFLPRMIQDLTKQETVPFGDAVLVTWDTCIGSEICEELWT 224 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + + S + K R ++VT S + NQ G D L Sbjct: 225 PHSPHIDMGLDGVEIITNASGSHHVLRKANTRVDLVTMATSKNGGIYLLANQKGCDGDRL 284 Query: 215 IFDGAS--------------FCFDGQQQLAFQM---------KHFSEQN----------- 240 +DG + F D + L + S +N Sbjct: 285 YYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRASPYPR 344 Query: 241 ----FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F H D + +W Y S +EE + AC L D+++++ Sbjct: 345 VKVDFALSCHEDLLAPISEPIEWKYHSP----------EEEISLGPACWLW--DFLRRSQ 392 Query: 292 FHKVIIGLSGGIDSALCAAI----------AVDALGKE---NVQTIMLPYKYTSPQSLED 338 ++ LSGG+DSA A + AV + +E +V+TI+ YT PQ D Sbjct: 393 QAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLADVRTIVNQISYT-PQDPRD 451 Query: 339 AAA-----------------CAKA------LGCKYDVLPIHDLVNHFFSLMSQFLQEEP- 374 C +A +G + I V + S + P Sbjct: 452 LCGHILTTCYMASKNSSQETCTRARELAQQIGSHHISFNIDPAVKAVMGIFSLVTGKSPL 511 Query: 375 ---------SGIVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGT 417 + +N+Q+RIR + LS S+ ++L ++N E +GY T Sbjct: 512 FAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGIRGGLLVLGSANVDESLLGYLT 571 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 Y S NP+ + KT + + L + P+ E P A+ + Q Sbjct: 572 KYDCSSADVNPIGGISKTDLRAFVQFCIERFQLPALQSILSA--PATAELEPLADGQVSQ 629 Query: 478 TDQESL 483 TD+E + Sbjct: 630 TDEEDM 635 >gi|261251445|ref|ZP_05944019.1| NAD synthetase [Vibrio orientalis CIP 102891] gi|260938318|gb|EEX94306.1| NAD synthetase [Vibrio orientalis CIP 102891] Length = 275 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 53/275 (19%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKEN-----VQTIMLPYKYTSPQ 334 ++ +Q++ +I+G+SGG+DS C A +AV+ L +E+ + LPY Q Sbjct: 28 IKRKLQESGCKSLILGISGGVDSTTCGRLAQLAVNQLNEESNAGYQFIAVRLPY---GDQ 84 Query: 335 SLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQ 383 ED A A ++ K V +H +H + L E+ + + V N++ Sbjct: 85 KDEDEAQLALQFIQPTHSVSVNIKAGVDGLH-AASHIALEGTGLLPEDKAKVDFVKGNVK 143 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R R ++ + +++ T + +E G+ T +GD + PL L K QV +LA+ Sbjct: 144 ARARMVAQYEIAGYVGGLVIGTDHSAENITGFYTKFGDGACDMAPLFGLSKRQVRELAAT 203 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIKRIVEN 499 + P +++K P+A EL P + D+++L Y +DD ++ V + Sbjct: 204 LGA--------------PEQLVKKVPTADLEELAPQKADEDALNLSYEQIDDFLEGKVVS 249 Query: 500 EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 QE D V H+ +++KR+ P Sbjct: 250 --------QEVTDRLV----HIYKITQHKRQPIPT 272 >gi|50954943|ref|YP_062231.1| NAD synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|71648719|sp|Q6AER9|NADE_LEIXX RecName: Full=NH(3)-dependent NAD(+) synthetase gi|50951425|gb|AAT89126.1| NH3-dependent NAD+ synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 279 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 30/222 (13%) Query: 286 YVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQT----IMLPYKYTSPQSLED 338 YV+ ++G+SGG DS+L +AV+ L ++ V + LPY + Q+ ED Sbjct: 34 YVRAAGASGFVLGVSGGQDSSLAGRLCQLAVERLAEQGVAAEFIAVRLPY---AVQNDED 90 Query: 339 AAACAKAL--GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 A A + + + I V + L E+ + N+++R+R A++ Sbjct: 91 DAQLALSFIRPERTVAVNIQRGVEGVGNEYRDALGEDMTDFAKGNVKARVRMVAQYAIAG 150 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++ T + +E G+ T YGD PL L K R + LG Sbjct: 151 QRRLLVVGTDHAAEAVTGFYTKYGDGGADLLPLSGLSK---------RQGRALLQHLGA- 200 Query: 457 TEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + EK+P+A+L P QTD+ +L Y +DD ++ Sbjct: 201 ----PARLYEKAPTADLLDQSPGQTDEANLGLRYSDIDDFLE 238 >gi|298368734|ref|ZP_06980052.1| NAD+ synthetase [Neisseria sp. oral taxon 014 str. F0314] gi|298282737|gb|EFI24224.1| NAD+ synthetase [Neisseria sp. oral taxon 014 str. F0314] Length = 272 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 14/169 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS------L 336 L+DY ++G+SGGIDSA+ +A+A A +V + +P + + QS + Sbjct: 23 LKDYALNARAKGFVVGVSGGIDSAVVSALA--ARTGLSVLLLDMPIRQKADQSGRAQEHI 80 Query: 337 EDAAAC-AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMAL 394 D G D+ P D F + + E P +A N +SR+R L Sbjct: 81 RDLTRLFPNVSGQTVDLTPTFDT---FAATVEARGSEFPDKQLALANARSRLRMVTLYYY 137 Query: 395 SNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++ T NK E VG+ T YGD +P+ DL KTQV+QLA+ Sbjct: 138 GQLHGCLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYQLAA 186 >gi|302819265|ref|XP_002991303.1| hypothetical protein SELMODRAFT_185983 [Selaginella moellendorffii] gi|300140883|gb|EFJ07601.1| hypothetical protein SELMODRAFT_185983 [Selaginella moellendorffii] Length = 295 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 22/240 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAG-NIAKARRAREEANRQGMDLILFTELFISGY----PPEDL 56 ++ +++++ L D A N+A A R EA+ +G ++IL ELF Y ED Sbjct: 1 MESRQVSVSSLQFACSDRADENVATAERLVREAHSRGANIILIQELFEGYYFCQAQREDF 60 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + +S + I +K + G I V F + NS+VI+DA G + + K Sbjct: 61 LL-RSKPREGHPTIQRMKELAKELGVVIPVSFFEEANNAHYNSIVIIDADGTDLGLYRKS 119 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ + EK F G + + + R+G+ IC D W + + GAE LF Sbjct: 120 HIPDGPGYQEKFYFNPGDTGFKVFDTKFARIGVAICWDQW-FPEAARAMALMGAEVLFYP 178 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 ++ + P + H ++ G +P++ N++G G ++ F G SF Sbjct: 179 TAIGSEPQDSGLDSREHWQRVMQGHAGANVIPLVASNRIGVEVVETEHGASKITFYGHSF 238 >gi|313500852|gb|ADR62218.1| NadE [Pseudomonas putida BIRD-1] Length = 275 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 35/227 (15%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 EA+ V ++D + +++G+SGG+DS A +A A+ + +T Sbjct: 25 EAEVARRVAFIKDCLANARLKTLVLGISGGVDSLTAALLAQRAINELRAETGDKAYTFIA 84 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE---PSGI--V 378 + LPY+ + DA AC + + K D + D+ +L +Q + P+ + V Sbjct: 85 VRLPYQVQHDE--HDAQACLEVI--KADEVHTVDIAPAVRALAAQVAALKNGSPTLVDFV 140 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 N+++R R ++ +++ T + +E +G+ T +GD + PL L K QV Sbjct: 141 VGNVKARTRMVAQYTIAGARAGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVR 200 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 +A S G P S++EK P+A +L P + D+ S Sbjct: 201 AIA---RSFG-----------APESLVEKVPTADLEDLEPGKPDEAS 233 >gi|261189261|ref|XP_002621042.1| glutamine-dependent NAD(+) synthetase [Ajellomyces dermatitidis SLH14081] gi|239591827|gb|EEQ74408.1| glutamine-dependent NAD(+) synthetase [Ajellomyces dermatitidis SLH14081] Length = 719 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 126/595 (21%), Positives = 212/595 (35%), Gaps = 131/595 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN V D GN + + A G L + EL I+GY +D + Sbjct: 1 MAPLVTVATCSLNQWVLDFEGNTNRIIDSIRIAKAAGAKLRVGPELEITGYSCQDHFLEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I T+ I +G P + + N+ + + I+ ++ K+ L Sbjct: 61 DLYLHVWQCIATIVDHPDCQDILIDIGAPVRHRNIRYNARIHILNRKILLIKPKMWLAGD 120 Query: 121 SEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWK 155 + ++E R F I+G + PI D +GI CE+++ Sbjct: 121 ANYYEYRWFTPWAKPRYVEDYYLERIVGGITGQATVPIGDAVISTYDSAIGIETCEELFT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDE 213 SN H+ G E + + S + KLK+R +++ + +Y NQ G G Sbjct: 181 PSNPGIHMGLNGVEIFTNSSGSHHELRKLKQRIDLIR-HCTRGGGIYLYANQRGEDGNGR 239 Query: 214 LIFDGASFCFDGQQQLA----FQMKHF----------SEQNFMTEWHYDQQLSQW----- 254 L FDG++ F + + F +K ++F T Q SQ Sbjct: 240 LYFDGSAGIFVNGRVVGMSSQFSLKDVDVVTAVIDLEEVRSFRTSVSRSSQGSQAPAYQR 299 Query: 255 ----------------NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 N Y +EE A AC L DY++++ + Sbjct: 300 IEAPISLSRKSDSLNPNIQPSPDIELEYHSPEEEIALGPACW--LWDYLRRSRQSGFFLP 357 Query: 299 LSGGIDSALCAAIA-------VDALGKEN------------------------------- 320 LSGG+DSA A I V A N Sbjct: 358 LSGGLDSASVAVITFSMCRLVVSACHDGNQAVIADMRRIVGEPADSQWLPETPQELCGKI 417 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKY---DVLPIHDLVNHFFSLMSQFLQE----- 372 + T + +S ++ A AK++G + D+ + +++ F+ ++ F Sbjct: 418 LHTCYMGTTNSSKETRNRAKELAKSIGSYHIDLDMDSVVSAISNLFTFVTNFTPRFSVHG 477 Query: 373 -EPS-GIVAENIQSRIRGNI------LMALSNHSKA----MLLTTSNKSEISVGYGTLYG 420 P+ + +NIQ+R R + L+ L ++L + N SE GY T Y Sbjct: 478 GSPTENLALQNIQARSRLVVGYMFAQLLPLVRQRPGGGSLLVLASGNLSEQLRGYLTKYD 537 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 S NP+ + K + + SW + P+ E S + +P+AEL P Sbjct: 538 CSSADLNPIGSIDKLDLVKFLSWAKVNFDI----PIIE----SFVHATPTAELEP 584 >gi|281426124|ref|ZP_06257037.1| para-aminobenzoate synthase, component I [Prevotella oris F0302] gi|299141920|ref|ZP_07035055.1| hydrolase, carbon-nitrogen family [Prevotella oris C735] gi|281399700|gb|EFB30531.1| para-aminobenzoate synthase, component I [Prevotella oris F0302] gi|298576771|gb|EFI48642.1| hydrolase, carbon-nitrogen family [Prevotella oris C735] Length = 295 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 30/278 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLV-- 57 +K++KI Q + V D A NI + + + +G LI+ EL S Y ED+ Sbjct: 1 MKEIKIGFLQQHNV-ADPAVNIQRLAKGIADLAARGAQLIVLQELHNSLYFCQVEDVNNF 59 Query: 58 -FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDK 114 F + + L G IV + G+ + +VVI G I K Sbjct: 60 DFAEPIPGPSTGFYGELAKQY---GVVIVTSLFEKRAPGLYHNTAVVIEKDGTIAGKYRK 116 Query: 115 INLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +++P+ ++EK F G PI RLG+L+C D W + + QGAE L Sbjct: 117 MHIPDDPAYYEKFYFTPGDLGFHPIDTSIGRLGVLVCWDQWY-PEAARLMALQGAEILIY 175 Query: 174 LNASPYYHNKLKKRHE--------IVTGQISHVHLPIIYVNQVG------GQDELI-FDG 218 A Y + E ++ G LP+I VN+VG GQ I F G Sbjct: 176 PTAIGYESSDTPDEQERQREAWTTVMRGHAVANGLPVIAVNRVGHEPDPSGQTRGIEFWG 235 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTE--WHYDQQLSQW 254 +SF Q ++ ++ + E++ + E H+ +Q+ +W Sbjct: 236 SSFAVGPQGEIHYRASNNEEESIVIEVDMHHSEQVRRW 273 >gi|229180313|ref|ZP_04307656.1| Carbon-nitrogen hydrolase [Bacillus cereus 172560W] gi|228603060|gb|EEK60538.1| Carbon-nitrogen hydrolase [Bacillus cereus 172560W] Length = 280 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADS 79 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K D H G I +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGVETKEKLIEWAKQYDIHIVGGSIA----KQTEQGVTNTMYVVNNEGQLVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 236 >gi|124516252|gb|EAY57760.1| putative carbon-nitrogen hydrolase [Leptospirillum rubarum] gi|206603093|gb|EDZ39573.1| Putative carbon-nitrogen hydrolase [Leptospirillum sp. Group II '5-way CG'] Length = 273 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 37/184 (20%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGM--DLILFTELFISGYPPEDLVFKKSF 62 ++I + Q NPV G++AGN+ + + R+G+ DL++F ELF SGY Sbjct: 3 IRIVLVQNNPVFGEVAGNLDRVKAL--YGGRKGLRPDLVIFPELFASGYQ---------- 50 Query: 63 IQACSSAIDTLKSDTHDG-----------------GAGIVVGFPRQDQEGVLNSVVILDA 105 + S A+ + D DG +V G P + V NS V+ Sbjct: 51 FTSKSEALSLGEGDGRDGREKGPTVRFLEEFSMETKGWVVGGLPLRRGNKVYNSAVVTHH 110 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRL-GILICEDIWKNSNICKHLK 164 G ++A+ DK +L E R F G +V + L G++IC D W + + L Sbjct: 111 GTVMAIYDKTHLFE----AENRWFERGSGPLCLVRTEFGLMGVMICFD-WLFPEVTRSLA 165 Query: 165 KQGA 168 GA Sbjct: 166 LSGA 169 >gi|212550973|ref|YP_002309290.1| N-carbamoylputrescine amidase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549211|dbj|BAG83879.1| N-carbamoylputrescine amidase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 306 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 20/180 (11%) Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNS 157 +VVI GNI+ K+++P+ ++EK F G PI RLGILIC D W Sbjct: 113 AVVIERDGNIVGRYRKMHIPDDPAYYEKFYFAPGDLGFQPIQTSLGRLGILICWDQWY-P 171 Query: 158 NICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISH-VH--LPIIYVNQVG 209 + + GA+ L A Y + K K+++ + Q +H +H LP + VN+VG Sbjct: 172 EAARLMALSGADILIYPTAIGYESSDTDEEKRKQKNAWIISQQAHAIHNGLPSVTVNRVG 231 Query: 210 ------GQ-DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE--WHYDQQLSQ-WNYMSD 259 GQ + ++F G SF GQ ++ Q E+N + + +H +++ + W ++ D Sbjct: 232 HEYDSSGQTNGILFWGNSFVCGGQGEIIAQASDMQEENLIVDINFHRQEEIRRVWPFLRD 291 >gi|219117689|ref|XP_002179635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408688|gb|EEC48621.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 723 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 130/596 (21%), Positives = 205/596 (34%), Gaps = 137/596 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK-SFI 63 + +A LN D GN + + EA R G L EL I GY ED + +F Sbjct: 12 ITVATCNLNQWALDFDGNADRIIESCREAKRLGASYRLGPELEIPGYGCEDHFLENDTFA 71 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S + L+S D +G P N V++ I+ +R K+ + + + Sbjct: 72 HCWESLVMILESGVTDEML-CDLGMPVLFCGVRYNCRVLVRCRKILLIRPKVAMADNGNY 130 Query: 124 HEKRTFISGYSND---------PIVFRD-------------------IRLGILICEDIWK 155 E R F + S P VF + + +G CE++W Sbjct: 131 RESRYFTAYRSPIDTKCEKLILPKVFHEKFGQLSAPFGTRFLEFADGVSIGCESCEELWT 190 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 L QGAE + + S + KL +R E++ +Y NQ G + Sbjct: 191 PRATHIELALQGAEICGNGSGSHHELRKLNQRLELIVSATRKCGGVYLYANQRGCDGGRM 250 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFM-------------------------TEWHYDQ 249 +DG + + LA Q + FS ++ TE Q Sbjct: 251 YYDGGALIVCNGKILA-QAQQFSLEDVQVVAATVDLDDVRSYRASIPSFGVQATESQRAQ 309 Query: 250 QLSQW----NYMSDDSASTMY----------IPLQEEEADYN-ACVLSLRDYVQKNNFHK 294 + +Y+ ++ AS++ + EEE AC L DY++++ Sbjct: 310 SQRSFIECSDYLVNEGASSLMSATSISQSPRVHCPEEECCLGPACW--LWDYLRRSGAAG 367 Query: 295 VIIGLSGGIDSALCAAI--------------------AVDA-----------------LG 317 + LSGG DS+ AAI A D L Sbjct: 368 FFLPLSGGADSSSVAAIVGAMCKMATAAARADPNGVVATDCRKICRQEGLWVPSSSHELA 427 Query: 318 KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--- 374 + T + + +S + A + +G + + I +V + S P Sbjct: 428 NFVLHTTYMGTENSSENTTSRARRLGEVIGSYHLSIKIDTMVQAVVKVFSTTTGHTPRFS 487 Query: 375 --SGIVAE-----NIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLY 419 G VAE NIQ+R+R +L + S +L L ++N E GY T Y Sbjct: 488 VRGGSVAEDLALQNIQARLRMVTAYLYAQLLPWVRGRSGFLLVLGSANVDEGLRGYMTKY 547 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 S NP+ + K + ++ W T L E I P+AELRP Sbjct: 548 DCSSADLNPIGAISKGDLKKMLEWAAK---TYDWEILAE-----IAGAPPTAELRP 595 >gi|120437118|ref|YP_862804.1| NH(3)-dependent NAD(+) synthetase [Gramella forsetii KT0803] gi|117579268|emb|CAL67737.1| NH(3)-dependent NAD(+) synthetase [Gramella forsetii KT0803] Length = 263 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 25/177 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQ---- 334 L++Y K N + +IG+SGGIDSA LCA + L E +P + Q Sbjct: 14 LKEYATKANMNGFVIGVSGGIDSAVASTLCAKTGLPTLCLE------MPIHQSENQVSRA 67 Query: 335 -----SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 L+ A AL + ++ P+ + F + Q + + N ++R+R Sbjct: 68 RKHIDELQHNFANVSAL--EVNLTPVFE---QFKKGVPQHRETSSVDLALANSRARLRMT 122 Query: 390 ILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 L + K ++ T NK E VG+ T YGD +P+ DL K++V++L + N Sbjct: 123 TLYYFAGLHKYLVAGTGNKIEDFGVGFYTKYGDGGVDLSPIADLLKSEVYELGEYLN 179 >gi|300776658|ref|ZP_07086516.1| NAD synthetase [Chryseobacterium gleum ATCC 35910] gi|300502168|gb|EFK33308.1| NAD synthetase [Chryseobacterium gleum ATCC 35910] Length = 263 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 28/222 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+DY + +IG+SGG+DS + + +A A+ I +P + + Q ++ A Sbjct: 14 LKDYATNAKVNGYVIGVSGGVDSGVVSTLA--AMTGMKTLLIGMPIRQKADQ-VDRAQDH 70 Query: 343 AKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 L ++ D+ P + + F + ++ E + N ++R+R L Sbjct: 71 MNDLKSRFPNVETISVDLTPAFEEIYKTFHVNNEVYPNE--NLTFANTRARLRMLTLYYY 128 Query: 395 SNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + ++ T NK E +G+ T YGD +P+ DLYKT+V++LA N + Sbjct: 129 GQLNGLLVCGTGNKVEDFGIGFYTKYGDGGVDVSPIADLYKTEVYELAKGLNL------I 182 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIK 494 + E IP L + +TD++ + YP L+ I K Sbjct: 183 KSIQEAIPTDGLWDT-------ERTDEQQIGASYPELEKIQK 217 >gi|71735421|ref|YP_276804.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555974|gb|AAZ35185.1| hydrolase, carbon-nitrogen family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 264 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q +P+ DI+GN+ + + + A QG L++ E+F++GY + Sbjct: 1 MRIALYQCSPLPLDISGNLTRLEKQAQAAAEQGAQLLICPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + V N+V ++D+ L NY + Sbjct: 61 QDGPAASRIAAIAQASGIAILYGYPERGPDQQVYNAVQLIDS-------RGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFAAGEDYYPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + ++ R H ++Y N G + + + G +S C DG + L Sbjct: 173 MLPYDFVCEVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLSSLCAPDGSRPL 224 >gi|81319942|sp|Q75SP7|RSAM_PSESP RecName: Full=(R)-stereoselective amidase gi|46275796|dbj|BAD15093.1| (R)-stereoselective amidase [Pseudomonas sp. MCI3434] gi|68163279|dbj|BAE02667.1| R-stereospecific amidase [Pseudomonas sp. MCI3434] Length = 274 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 24/264 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + QL GD A N+++ A DL++F E ++SG+ V Q Sbjct: 1 MKIELVQLAGRDGDTAYNLSRTLNAIATCAGD-TDLLVFPETYLSGF-----VGGAQLAQ 54 Query: 65 AC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL-PN 119 + + TL +V+GF Q NS V++ I K +L P+ Sbjct: 55 VAEPLHGTTLQTLLQAVRQRDVAVVLGFAEVHQGRFYNSSVLVTPEGIALQYRKTHLWPS 114 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 E+ F G +++R +R+G+LIC DI + + L + GAE + N + Sbjct: 115 -----ERSDFSPGDRFTTVLWRGVRVGLLICYDI-ELPETSRALAQLGAEVVIVTNGNMD 168 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + + + + Q + L + VN+VG G D L+F G S D ++ F+ E Sbjct: 169 PYGPVHRTAIMARAQEN--QLFAVMVNRVGAGDDGLVFAGGSMAVDPFGRVLFEAGR-DE 225 Query: 239 QNFMTEWHYDQ---QLSQWNYMSD 259 + E DQ ++Y+ D Sbjct: 226 VRHVVELDLDQLKAARRDYDYLKD 249 >gi|77735841|ref|NP_001029615.1| glutamine-dependent NAD(+) synthetase [Bos taurus] gi|110288494|sp|Q3ZBF0|NADE_BOVIN RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing]; AltName: Full=NAD(+) synthetase gi|73587273|gb|AAI03389.1| NAD synthetase 1 [Bos taurus] gi|296471428|gb|DAA13543.1| glutamine-dependent NAD(+) synthetase [Bos taurus] Length = 706 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 126/599 (21%), Positives = 214/599 (35%), Gaps = 124/599 (20%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKHRGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R K+ L N Sbjct: 61 DTLLHSLQVLAALLESPVTQDIICDVGMPVMHRNVRYNCRVIFLNRKILLIRPKMALANE 120 Query: 121 SEFHEKRTFISGYSND-------PIVFRDIR------------------LGILICEDIWK 155 + E R F + P + +D+ +G +CE++W Sbjct: 121 GNYRELRWFTPWSRSRQTEEYFLPRMLQDLTKQETVPFGDAVLSTWDTCIGSEVCEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + S + K R ++VT + + NQ G D L Sbjct: 181 PHSPHVDMGLDGVEIFTNASGSHHVLRKAHARVDLVTMATTKNGGIYLLANQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQMKHFSEQNFMTEWHYD----QQLSQWNY 256 +DG + F D + L + +++ E ++S + Sbjct: 241 YYDGCALIAMNGSIFAQGSQFSLDDVEVLTATLDLEDIRSYRAEISSRNLAASRVSPYPR 300 Query: 257 MSDDSASTMYIPLQEE-----EADYN----------ACVLSLRDYVQKNNFHKVIIGLSG 301 + D A + + L E E Y+ AC L D+++++ + LSG Sbjct: 301 VKVDFALSCHEDLLEPVSEPIEWKYHSPAEEISLGPACWLW--DFLRRSRQAGFFLPLSG 358 Query: 302 GIDSALCAAIA-------VDALGKEN------VQTIMLPYKYT----------------- 331 G+DSA A + +A+ + N V+TI+ YT Sbjct: 359 GVDSAATACLVYSMCHQVCEAVKRGNLEVLADVRTIVNQLSYTPQDPRELCGRVLTTCYM 418 Query: 332 -----SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SG 376 S ++ + A A+ +G + L I +V L S P Sbjct: 419 ASENSSQETCDRARELAQQIGSHHIGLHIDPVVKALVGLFSLVTGASPRFAVHGGSDREN 478 Query: 377 IVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +N+Q+R+R + LS S+ ++L ++N E +GY T Y S NP Sbjct: 479 LALQNVQARVRMVIAYLFAQLSLWSRGAPGGLLVLGSANVDESLLGYLTKYDCSSADINP 538 Query: 429 LKDLYKTQV---FQLASWRNSHGITSGLGPLTEVI-PPSILEKSPSAELRPHQTDQESL 483 + + KT + QL R L L ++ P+ E P A R QTD+E + Sbjct: 539 IGGISKTDLRAFVQLCVERFQ------LPALQSILAAPATAELEPLAHGRVSQTDEEDM 591 >gi|322419842|ref|YP_004199065.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M18] gi|320126229|gb|ADW13789.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M18] Length = 293 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 33/246 (13%) Query: 2 LKKLKIAIAQLNPVVGD---IAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF 58 + KLK+A+ Q G +A IA+ R EA +G L++ EL Y F Sbjct: 1 MNKLKVALVQQALAAGRDEMVASTIARIR----EAASKGAQLVVLQELHTGSY------F 50 Query: 59 KKSFIQACSSAIDTLKS-DTHDGGA-----GIVVG---FPRQDQEGVLNSVVILDA-GNI 108 ++ AC +T+ T GA G+V+ F R+ N+ V+L+ G+I Sbjct: 51 CQTEDTACFDLAETIPGPSTEQFGALARELGLVIVTSLFERRAPGLYHNTAVVLEKDGSI 110 Query: 109 IAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 K+++P+ F+EK F G +P+ RLG+L+C D W + + G Sbjct: 111 AGKYRKMHIPDDPAFYEKFYFTPGDLGFEPVQTSVGRLGVLVCWDQW-YPEAARMMALAG 169 Query: 168 AEFLF---SLNASPYYHNKLKKRH--EIVTGQISHV---HLPIIYVNQVGGQDELIFDGA 219 A+ L ++ P ++R VT Q SH +P++ VN+VG + + GA Sbjct: 170 ADLLIYPTAIGWDPRDEAAEQQRQLDAWVTVQRSHAVANGIPVVSVNRVGFEADPSGAGA 229 Query: 220 SFCFDG 225 F G Sbjct: 230 GIKFWG 235 >gi|49083112|gb|AAT50951.1| PA0293 [synthetic construct] Length = 293 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 111/239 (46%), Gaps = 18/239 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDL 56 M + + +A Q+ D NIA+A + +A +G+ +IL ELF + Y P D Sbjct: 1 MTRNVTVAATQM-ACSWDRPANIARAEKLVRQAAARGVQIILIQELFETPYFCQKPNPDY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + + ++ ++AI ++ + + + F + NS+ ++DA G + V K Sbjct: 60 LQLATTVEE-NAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKS 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ +HEK F G + + R R+G+ IC D + + + GAE LF Sbjct: 119 HIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQ-RFPESARSMALLGAELLFYP 177 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFD 224 ++ + P+ + + H + G +P++ N++G +++ + F G+SF D Sbjct: 178 TAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIAD 236 >gi|170288562|ref|YP_001738800.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermotoga sp. RQ2] gi|170176065|gb|ACB09117.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermotoga sp. RQ2] Length = 260 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 4/140 (2%) Query: 14 PVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTL 73 P +GD GN+ + + E A +G ++++F EL ISGY ++ + K+ + A L Sbjct: 3 PAIGDFEGNLERIEQFIEMAVSEGAEVVVFPELTISGYTWDEAILKRGALFFSEVAKKKL 62 Query: 74 KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY 133 + +G I VG PR + NS+VI + DK +L EK F G Sbjct: 63 LKLSREGQILIAVGTPRIVLGKLRNSLVIFKKKKELLFYDKTHLFR----GEKNVFEPGE 118 Query: 134 SNDPIVFRDIRLGILICEDI 153 +R + G LIC +I Sbjct: 119 YFLVFSYRGVVFGTLICYEI 138 >gi|323496767|ref|ZP_08101812.1| NAD synthetase [Vibrio sinaloensis DSM 21326] gi|323318192|gb|EGA71158.1| NAD synthetase [Vibrio sinaloensis DSM 21326] Length = 275 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 43/270 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ-----TIMLPYKYTSPQ 334 ++ +Q+ +++G+SGG+DS C A IA+D L +E + LPY Q Sbjct: 28 IKRKLQEAGCKALVLGISGGVDSTTCGRLAQIAIDQLNEETTGGYQFIAVRLPY---GEQ 84 Query: 335 SLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQS 384 ED A A ++ K V IH N Q+ V N+++ Sbjct: 85 KDEDEAQLALGFIQPSHSVSVNIKAGVDGIHAATNTALEGTGLIPQDAAKVDFVKGNVKA 144 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R R ++ + ++L T + +E G+ T +GD + PL L K QV ++A+ Sbjct: 145 RARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVREVAATL 204 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFI 504 + P +++K P+A+L E L P +D + + + F+ Sbjct: 205 GA--------------PELLVKKVPTADL-------EELDPQKADEDALNLTYDQIDDFL 243 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 + T R V H+ +++KR+ P Sbjct: 244 EGKPVSQEVTERLV-HIYKVTQHKRQPIPT 272 >gi|75076189|sp|Q4R5Y2|NADE_MACFA RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing]; AltName: Full=NAD(+) synthetase gi|67970300|dbj|BAE01493.1| unnamed protein product [Macaca fascicularis] Length = 706 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 124/606 (20%), Positives = 207/606 (34%), Gaps = 138/606 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI + I+ +R K+ L N Sbjct: 61 DTLLHSFQVLAALLESPVTQDIICDVGMPVMHRNVRYNCRVIFLSRKILLIRPKMALANE 120 Query: 121 SEFHEKRTF-------------------------ISGYSNDPIVFRDIRLGILICEDIWK 155 + E R F + + + + D +G ICE++W Sbjct: 121 GNYRELRWFTPWSRSRHTEEYLLPRMIQDLTKQETAPFGDAVLATWDTCIGSEICEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + + S + K R ++VT S + NQ G D L Sbjct: 181 PHSPHIDMGLDGVEIITNASGSHHVLRKANTRVDLVTMATSKNGGIYLLANQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQM---------KHFSEQN----------- 240 +DG + F D + L + S +N Sbjct: 241 YYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRASPYPR 300 Query: 241 ----FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F H D + +W Y S +EE + AC L D+++++ Sbjct: 301 VKVDFALSCHEDLLAPVSEPIEWKYHSP----------EEEISLGPACW--LWDFLRRSQ 348 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGK-------------ENVQTIMLPYKYTSPQSLED 338 ++ LSGG+DSA A + + +V+TI+ YT PQ D Sbjct: 349 QGGFLLPLSGGVDSAATACLVYSMCCQVCKSVRSGNQEVLADVRTIVNQISYT-PQDPRD 407 Query: 339 AAA-----------------CAKA------LGCKYDVLPIHDLVNHFFSLMSQFLQEEP- 374 C +A +G + L I V + S + P Sbjct: 408 LCGHILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDPAVKAVTGIFSLVTGKSPL 467 Query: 375 ---------SGIVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGT 417 + +N+Q+RIR + LS S+ ++L ++N E +GY T Sbjct: 468 FAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGIRGGLLVLGSANVDESLLGYLT 527 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 Y S NP+ + KT + + + L + + P E P A+ + Q Sbjct: 528 KYDCSSADINPIGGISKTDLRAFVQFCIERFQLTALQSI--ISAPVTAELEPLADGQVSQ 585 Query: 478 TDQESL 483 TD+E + Sbjct: 586 TDEEDM 591 >gi|319953726|ref|YP_004164993.1| DNA-directed RNA polymerase, subunit h [Cellulophaga algicola DSM 14237] gi|319422386|gb|ADV49495.1| DNA-directed RNA polymerase, subunit H [Cellulophaga algicola DSM 14237] Length = 262 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 33/177 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDAL-------------GKENVQTIM 325 L+DY + +IG+SGGIDSA LCA +D L G+ + Sbjct: 14 LKDYATNAHMKGFVIGISGGIDSAITSTLCAKTGLDLLCLEMPIHQEENQIGRASRHIAW 73 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 L +++ + LE ++ P+ D + M EE + N ++R Sbjct: 74 LQENFSNVKRLE------------INLTPVFD---SLVAAMPTVENEEERFMSLANTRAR 118 Query: 386 IRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +R L + ++ T NK E VG+ T YGD +P+ DL KT+V+++A Sbjct: 119 LRMTSLYYFAALEAYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLLKTEVWEIA 175 >gi|28898548|ref|NP_798153.1| putative carbon-nitrogen hydrolase [Vibrio parahaemolyticus RIMD 2210633] gi|153836144|ref|ZP_01988811.1| hydrolase, carbon-nitrogen family [Vibrio parahaemolyticus AQ3810] gi|260365012|ref|ZP_05777583.1| N-carbamoylputrescine amidase [Vibrio parahaemolyticus K5030] gi|260879593|ref|ZP_05891948.1| N-carbamoylputrescine amidase [Vibrio parahaemolyticus AN-5034] gi|260894932|ref|ZP_05903428.1| N-carbamoylputrescine amidase [Vibrio parahaemolyticus Peru-466] gi|28806766|dbj|BAC60037.1| putative carbon-nitrogen hydrolase [Vibrio parahaemolyticus RIMD 2210633] gi|149750419|gb|EDM61164.1| hydrolase, carbon-nitrogen family [Vibrio parahaemolyticus AQ3810] gi|308085912|gb|EFO35607.1| N-carbamoylputrescine amidase [Vibrio parahaemolyticus Peru-466] gi|308093305|gb|EFO43000.1| N-carbamoylputrescine amidase [Vibrio parahaemolyticus AN-5034] gi|308111550|gb|EFO49090.1| N-carbamoylputrescine amidase [Vibrio parahaemolyticus K5030] Length = 288 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 16/238 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M K +K A QL D+ N+ KA++A EA + G ++IL ELF + Y E Sbjct: 1 MSKVVKFAALQLTKSW-DLEENLVKAKKAIREAAQNGANVILPQELFAAPYFCKKQEAKY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + A S I + + + G I V + + NS+V++DA G ++ K + Sbjct: 60 FELAEETANSHLIQEMSALAKELGVVIPVSYFEKAGNTFFNSLVMIDADGTVLDNYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + + G IC D W + + L GAE +F Sbjct: 120 IPDGPGYSEKYYFSPGDTGFKVWQTKFGKFGAGICWDQW-FPELARSLALHGAEAIFYPT 178 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFD 224 ++ + P + H + G + +P+I N+VG + E F G+SF D Sbjct: 179 AIGSEPQDPTLDSRDHWQRTMQGHSAANLVPVIASNRVGTEVDDGIETTFYGSSFITD 236 >gi|270292722|ref|ZP_06198933.1| N-carbamoylputrescine amidase [Streptococcus sp. M143] gi|270278701|gb|EFA24547.1| N-carbamoylputrescine amidase [Streptococcus sp. M143] Length = 291 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ +++A Q+ D+A NI A R +A +G +IL ELF Y ++ + Sbjct: 1 MRNVRVAAIQMQ-CTKDVATNIQTAERLVRQAADKGAQIILLPELFERPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVTENTAIQHFKVIAKELQVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + R ++GI IC D W + L GAE LF + Sbjct: 120 PDDHYYQEKFYFTPGNIGFKVWDTRYAKIGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDGAS 220 + + P + + G + +P+I N+ GGQ L F G+S Sbjct: 179 IGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPSEENGGQSSSLDFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|16802834|ref|NP_464319.1| hypothetical protein lmo0792 [Listeria monocytogenes EGD-e] gi|224501904|ref|ZP_03670211.1| hypothetical protein LmonFR_05227 [Listeria monocytogenes FSL R2-561] gi|255028647|ref|ZP_05300598.1| hypothetical protein LmonL_04616 [Listeria monocytogenes LO28] gi|16410181|emb|CAC98870.1| lmo0792 [Listeria monocytogenes EGD-e] Length = 296 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 29/269 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIQYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I A S+ + TLK + GI + + ++ N+ +I+D Sbjct: 61 PLATGFGAERFKWLDEAIAADSAYVSTLKKLAKELQIGICATYLSKTEQNSQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARILM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +GAE + NA +P N+L R E + G ++ + P + +IFD Sbjct: 177 LKGAEIILVPNACDMNPARLNQLNSRAFENMVG-VAMANYPGEKWGRSTAFSPIIFDENG 235 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D + + FSE F+ E++ D+ Sbjct: 236 ---DYRDNTIIETDDFSEGIFIAEFNLDE 261 >gi|260769298|ref|ZP_05878231.1| NAD synthetase [Vibrio furnissii CIP 102972] gi|260614636|gb|EEX39822.1| NAD synthetase [Vibrio furnissii CIP 102972] Length = 276 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKEN------VQTIMLPYKYTSPQSLEDAAACAKA 345 +++G+SGGIDS C A +AVDAL +E+ + LPY Q ED A A A Sbjct: 40 LVLGISGGIDSTTCGRLAQLAVDALNQEHGTDQYKFVAVRLPY---GAQKDEDEAQQALA 96 Query: 346 ---------LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 + K V +H +H + + E + I V N+++R R + Sbjct: 97 FIQPTFSVSVNIKAGVDGLH-AASHDALAGTGLIPSEAAKIDFVKGNVKARARMVAQYEI 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV Q+A+ + Sbjct: 156 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVRQVAAALGA-------- 207 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+++L Y +DD ++ Sbjct: 208 ------PELLVHKTPTADLEELAPQKADEDALNLTYEQIDDFLE 245 >gi|114707751|ref|ZP_01440645.1| hypothetical protein FP2506_17379 [Fulvimarina pelagi HTCC2506] gi|114536740|gb|EAU39870.1| hypothetical protein FP2506_17379 [Fulvimarina pelagi HTCC2506] Length = 289 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 7/155 (4%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + + AQ P +G+I GN + EA G DL++ EL SGY E + Sbjct: 5 STIHVTCAQFEPRIGEIEGNRETSIALVSEAADNGADLVVLPELCQSGYVIESRSEAYAL 64 Query: 63 IQACSSA--IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + I+ + + IV GF +D + + NS V++ G I+ K N+ Sbjct: 65 AETVPGGPTIEAWAALAQERKIHIVAGFLERDDDRLYNSAVVVGPGGILGTYRK----NH 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIW 154 E F G N PI RLG+LIC D W Sbjct: 121 LWDEEALFFERGNRNFPIFHTPFGRLGVLICYDGW 155 >gi|325273051|ref|ZP_08139361.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas sp. TJI-51] gi|324101824|gb|EGB99360.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas sp. TJI-51] Length = 264 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 23/226 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA+ Q +P D+ GN+ + R+ + A +G L++ E+F+SGY + Sbjct: 1 MHIALFQGHPQPLDVPGNLQRLRQQAQLAVERGAQLLVCPEMFLSGYNIGLAQVEHLAEA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNYSEF 123 A A + IV G+P + ++G + NSV ++DA +L NY + Sbjct: 61 ADGPAAMAVVEIAQAHRIAIVYGYPERGEDGAIYNSVQLIDA-------HGRSLGNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F G + P+V ++G+LIC DI N + L GAE + + N Sbjct: 114 HLFGELDRSMFSPGPDHFPVVQLEGWKVGLLICYDIEFPEN-ARRLALDGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +PY + ++ R Q ++Y N G + ++ + G S Sbjct: 173 MAPYDFTCQVTVRARAQENQCY-----LVYANYCGAEGQIQYCGQS 213 >gi|134116999|ref|XP_772726.1| hypothetical protein CNBK1000 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255344|gb|EAL18079.1| hypothetical protein CNBK1000 [Cryptococcus neoformans var. neoformans B-3501A] Length = 706 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 117/559 (20%), Positives = 198/559 (35%), Gaps = 132/559 (23%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A QL D GN + R+ A +G L + EL + GY + + + Sbjct: 4 VTVATCQLRQWSLDFEGNCERILRSIAIAKSRGATLRVGPELEVPGYGCD------TMLH 57 Query: 65 ACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + L+S+ GIV +G P + + N VI+ G I+ +R K+ + N Sbjct: 58 SWEVLAKILQSEE---AKGIVCDIGMPLEHKNNNYNCRVIIFNGKILLIRPKMWMANDGN 114 Query: 123 FHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNS 157 + E R F ++G + P I D +G+ +CE+++ + Sbjct: 115 YRELRHFTPWHKHRQVEKHSLPHMIRIVTGQTYVPFGDAVIATEDTVIGVELCEELFTPA 174 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIF 216 + + G E + + S + KL +R E++ + +Y NQ G D L + Sbjct: 175 SPHILMGLDGVEIFTNSSGSHHELRKLNRRVELIKEATMKLGGIYLYANQQGCDGDRLYY 234 Query: 217 DGASFCFDGQQQLAFQMKHFS----------------------------------EQNFM 242 DGA Q LA Q FS + + Sbjct: 235 DGACLIAMNGQILA-QGPQFSLSEVEVVSATVDLRAVRAHRTTSSRRMQSAQAEAYERVV 293 Query: 243 TEWHYD--QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + D +Q+ + S Y +EE A AC L DY++++ + LS Sbjct: 294 ADTRLDGGEQIKVGLRETKGSMDVRYHTPEEEIALGPACWLW--DYLRRSRTQGYFLPLS 351 Query: 301 GGIDSALCAAI-------AVDALGKENVQTIMLPYKYT---------------------- 331 GGIDS A I V+A K + Q I + T Sbjct: 352 GGIDSCATAIIVHSMCRLVVEAAAKGDEQVITDARRITNEPEDSTYIPEDPREFAGRIFH 411 Query: 332 ---------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-------- 374 S ++ E A A A+G + L + V+ + S + P Sbjct: 412 TCYMGTENSSSETRERAKNLADAIGAYHVDLNMDTAVSAVKGIFSFVTGKTPQFKAHGGT 471 Query: 375 --SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSG 424 + +NIQ+R+R +L + + +L L ++N E GY T Y S Sbjct: 472 NAENLALQNIQARLRMVVSYMFAQLLPWVRGKNGGLLVLGSANVDESLRGYFTKYDCSSA 531 Query: 425 GFNPLKDLYKTQVFQLASW 443 NP+ + K + + +W Sbjct: 532 DVNPIGGISKVDLKRFIAW 550 >gi|255068641|ref|ZP_05320496.1| NAD+ synthetase [Neisseria sicca ATCC 29256] gi|255047111|gb|EET42575.1| NAD+ synthetase [Neisseria sicca ATCC 29256] Length = 282 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 18/171 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ-------- 334 L++YV + ++G+SGGIDSA+ +AIA A V + +P + + Q Sbjct: 33 LKNYVATAHAKGFVVGVSGGIDSAVVSAIA--ARTGLKVLLLEMPIRQKADQVSRAQEHI 90 Query: 335 -SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILM 392 LE A G D+ P D F + + E P+ +A N +SR+R L Sbjct: 91 RRLEQA--FPNVSGMSVDLTPTFDT---FAADVEVDETEFPAKQLALANARSRLRMLTLY 145 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 + ++ T NK E VG+ T YGD +P+ DL KTQ++Q+A+ Sbjct: 146 YYGQINGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQIYQIAA 196 >gi|326941807|gb|AEA17703.1| Nitrilase [Bacillus thuringiensis serovar chinensis CT-43] Length = 259 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K D H G I +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 VETKEKLIEWAKQYDVHIVGGSI----AKQTEQGVTNTMYVVNNEGQLVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 215 >gi|315497906|ref|YP_004086710.1| n-carbamoylputrescine amidase [Asticcacaulis excentricus CB 48] gi|315415918|gb|ADU12559.1| N-carbamoylputrescine amidase [Asticcacaulis excentricus CB 48] Length = 294 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 22/219 (10%) Query: 7 IAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSF 62 +++A L G D+A NIAK EA +G +IL +ELF Y E+ F +F Sbjct: 5 VSVAALQTAYGADMAANIAKTEALVREAAAKGAQIILPSELFQGEYFCVSQEERWFATAF 64 Query: 63 I---QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGN-IIAVRDKIN 116 C A+ L ++ + +V+ ++EG NS+V++DAG ++ V K + Sbjct: 65 AWRSHPCVLAMQKLAAELN-----VVIPTSIYEKEGPHYFNSMVMIDAGGELLGVYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + R+G+ IC D W + + GAE LF Sbjct: 120 IPDGPGYQEKYYFRPGDTGFKVWDTQFARVGVGICWDQWY-PEAARAMALLGAEILFYPT 178 Query: 173 SLNASPYYH--NKLKKRHEIVTGQISHVHLPIIYVNQVG 209 ++ + P+ + ++ G +P++ N++G Sbjct: 179 AIGSEPHDAELDTAAPWQRVMQGHAVANVIPVVASNRIG 217 >gi|172041166|ref|YP_001800880.1| NAD synthetase [Corynebacterium urealyticum DSM 7109] gi|171852470|emb|CAQ05446.1| NAD-synthetase [Corynebacterium urealyticum DSM 7109] Length = 277 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 117/279 (41%), Gaps = 41/279 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT- 323 P + EA+ A V L DY +G+SGG DS L + +AV+ L V Sbjct: 18 PHIDPEAEVTARVNFLVDYALSTGAKGFTLGISGGQDSTLAGRLSQLAVEKLRSRGVPAE 77 Query: 324 ---IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEP-SGIV 378 + LPY + + EDA + + V + I D S +S+ L +P S Sbjct: 78 FYAMRLPYGTQADE--EDAQIALRFIQPSQSVTINIQDATLAIASAVSESLTGKPVSDFN 135 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 NI++R R L++ + +++ + + +E G+ T +GD + PL L K Q Sbjct: 136 KGNIKARQRMIAQYTLASETGTLVVGSDHAAEAITGFYTKFGDGAADLMPLVGLNKRQGA 195 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 +L + LG P S EK P+A+L RP +D+E+L Y +DD ++ Sbjct: 196 ELLRY---------LG-----APASTWEKVPTADLEEDRPMLSDEEALGVTYAHIDDYLE 241 Query: 495 RIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 ++ +E+L S +KR P Sbjct: 242 ------------GRDVPKAAAERIEYLWRASRHKRTTPP 268 >gi|312113556|ref|YP_004011152.1| N-carbamoylputrescine amidase [Rhodomicrobium vannielii ATCC 17100] gi|311218685|gb|ADP70053.1| N-carbamoylputrescine amidase [Rhodomicrobium vannielii ATCC 17100] Length = 284 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 15/243 (6%) Query: 6 KIAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKS 61 K+ +A + G DIA NIAK EA ++L +ELF Y + F + Sbjct: 3 KLTVAAIQTAYGPDIAENIAKTELFVREAAALDAQIVLPSELFQGIYFCSRQDPKWFGTA 62 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 + + L + G I + F +D NSV I DA G ++ V K ++P+ Sbjct: 63 YPTREHPCVRALAKLAGELGIVIPISFFEKDGPAYYNSVAIADADGEVLGVYRKSHIPDG 122 Query: 121 SEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNA 176 + EK F G + R +G+ IC D W + + QGA+ LF ++ + Sbjct: 123 PGYQEKYYFRPGNTGFKAWKTRFATIGVGICWDQW-FPEAARAMALQGADVLFYPTAIGS 181 Query: 177 SPY--YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 PY + ++ + G +P++ N++G +D DGA F G +A Sbjct: 182 EPYDTALDTHRRWQRAMQGHAVSNAIPVVAANRIGLEDN---DGAVQRFYGHSFIADHTG 238 Query: 235 HFS 237 F+ Sbjct: 239 EFA 241 >gi|296805652|ref|XP_002843650.1| aliphatic nitrilase [Arthroderma otae CBS 113480] gi|238844952|gb|EEQ34614.1| aliphatic nitrilase [Arthroderma otae CBS 113480] Length = 335 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 19/159 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 LK+AI Q P D+AG++ K EA R G L+ F E +I GYP P D + Sbjct: 6 LKVAITQAQPKWLDLAGSVEKTVNLITEAARGGARLVAFPECWIPGYPGWIWQRPVDPII 65 Query: 59 KKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGV-LNSVVILDAGNIIAVR 112 +IQ S+ ++T+KS +V+GF D V ++ +I G ++ R Sbjct: 66 NTKYIQNSLSINSAEMNTIKSAAKSNNIAVVLGFAEAIDTHSVYISQAIISPKGELLMHR 125 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICE 151 KI P + E+ F G +D D+ G CE Sbjct: 126 RKIK-PTHM---ERTVFGDGSGSDLTNVADVDFG---CE 157 >gi|78188910|ref|YP_379248.1| carbon-nitrogen hydrolase family protein [Chlorobium chlorochromatii CaD3] gi|78171109|gb|ABB28205.1| carbon-nitrogen hydrolase family protein [Chlorobium chlorochromatii CaD3] Length = 294 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 78/297 (26%), Positives = 126/297 (42%), Gaps = 29/297 (9%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK-S 61 + + IA+ Q + GD N A+A EA G +I ELF++ Y + ++ Sbjct: 4 ESVSIAVVQ-SECKGDAVANRAEATAKIREAAALGAQIICLQELFVTRYFCQTEAYEPFG 62 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVV---GFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 +A T G+V+ F R+ + N+ V++DA G+ + + K+++ Sbjct: 63 EAEAIPDGATTRLMQELAAELGVVIIASLFERRARGLHHNTAVVIDADGSYLGMYRKMHI 122 Query: 118 PNYSEFHEKRTFIS---GYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 P+ F+EK F GY VF R +G+LIC D W + +GAE LF Sbjct: 123 PDDPGFYEKFYFTPSDLGYK----VFKTRYATIGVLICWDQWY-PEAARLTALKGAEILF 177 Query: 173 SLNASPYY--HNKLKKRH----EIVTGQISHVHLPIIYV---NQVGGQDELIFDGASFCF 223 A + + + RH +T Q SH ++V N+VG ++ L F G SF Sbjct: 178 YPTAIGWATDEDSAEVRHAQQNAWITMQRSHAIANGVFVAAANRVGTEENLEFWGNSFIS 237 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSDDSASTMYIPLQEEEADYN 277 D Q+ + H E + + + S W ++ D T Y LQ+ D N Sbjct: 238 DPFGQMVAEAPHQHETILLAQCDLSRINFYRSHWPFLRDRRIET-YGGLQQRFLDNN 293 >gi|149189023|ref|ZP_01867312.1| NAD synthetase [Vibrio shilonii AK1] gi|148837209|gb|EDL54157.1| NAD synthetase [Vibrio shilonii AK1] Length = 276 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 42/236 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSP 333 ++ +Q++ +++G+SGG+DS C A +AV+ L +E+ + + LPY Sbjct: 28 IKSKLQQSGCKSIVLGISGGVDSTTCGRLAQLAVNELNEESNSSDYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENI 382 Q ED A A ++ K V +H +H + L E+ + + V N+ Sbjct: 85 QKDEDEAQLALSFIEPTHSVSVNIKAGVDGLH-AASHIALEGTGLLPEDSAKVDFVKGNV 143 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R R ++ + ++L T + +E G+ T +GD + PL L K QV ++A Sbjct: 144 KARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVREVAD 203 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + P +++K+P+A EL P + D+++L Y +DD ++ Sbjct: 204 TLGA--------------PEQLVKKTPTADLEELAPQKADEDALNLTYDQIDDFLE 245 >gi|30022121|ref|NP_833752.1| Nitrilase [Bacillus cereus ATCC 14579] gi|296504528|ref|YP_003666228.1| nitrilase [Bacillus thuringiensis BMB171] gi|29897678|gb|AAP10953.1| Nitrilase [Bacillus cereus ATCC 14579] gi|296325580|gb|ADH08508.1| Nitrilase [Bacillus thuringiensis BMB171] Length = 259 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K D H G I +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 VETKEKLIEWAKRYDVHIVGGSI----AKQTEQGVTNTMYVVNNEGQLVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 215 >gi|241666564|ref|YP_002984648.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862021|gb|ACS59686.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 285 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 14/175 (8%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED---LVFK 59 + + +A Q P+VGD AGN+A R A +G ++++ EL SGY D + Sbjct: 13 RTVTVATVQFEPIVGDRAGNLAAIERLVRSAKTRGAEIVVLPELADSGYNFRDGDEVATL 72 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + SA +TL + G IV G QD + NS ++ I K++L N Sbjct: 73 AGPVPGGPSA-ETLCRLAEELGLYIVSGVAEQDGDRFYNSALLCGPEGYIGKYRKLHLWN 131 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFL 171 +E R F G P+ D+ R+GI IC D W + L GAE + Sbjct: 132 ----NENRFFRKGDLGLPVF--DLPFGRIGIAICYDGWFPETF-RQLALAGAELV 179 >gi|163941775|ref|YP_001646659.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacillus weihenstephanensis KBAB4] gi|163863972|gb|ABY45031.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacillus weihenstephanensis KBAB4] Length = 259 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 15/225 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A Q++ V GD+ NI A++ EA ++ D+I+ EL+ +GY DL Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKKKISEAMKERPDVIVLPELWTTGY---DLTRLSEI-- 55 Query: 65 ACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPN 119 A + ++T LK + G IV G +Q ++GV N++ V+ + GN++ K++L Sbjct: 56 ADTDGLETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNNEGNLVNEYSKVHL-- 113 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + E + ++G D+ IC DI + H K GA+ LF + P Sbjct: 114 FQLMDEHKYLVAGNETGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPL 172 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 173 V--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|254830220|ref|ZP_05234875.1| hydrolase, carbon-nitrogen family protein [Listeria monocytogenes 10403S] Length = 296 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 24/206 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIQYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNY 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I+A S+ + TLK + GI + + ++ + N+ +I+D Sbjct: 61 PLATGFGAERFKWLNEAIEADSAYVSTLKKLAKELQIGICATYLSKTEQKIQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR 187 +GAE + NA +P N+L R Sbjct: 177 LKGAEIILVPNACDMNPARLNQLNSR 202 >gi|330501311|ref|YP_004378180.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas mendocina NK-01] gi|328915597|gb|AEB56428.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas mendocina NK-01] Length = 293 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 18/239 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDL 56 M + + +A Q+ D NIA A R +A QG +IL ELF + Y P D Sbjct: 1 MSRIVTVAATQM-ACSWDTPANIANAERLVRQAAAQGAQIILIQELFEAPYFCQKPNVDY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + ++ + AI + + + + F + NS+ ILDA G + + K Sbjct: 60 TQLATTVEE-NPAIAHFQKVAAELKVVLPISFFERAGRARFNSIAILDADGTNLGIYRKS 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ +HEK F G + + R+G+ IC D W + + GAE L Sbjct: 119 HIPDGPGYHEKYYFNPGDTGFKVWDTAYARIGVGICWDQW-FPECARSMALMGAEILLYP 177 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFD 224 ++ + P+ + + H + G +P++ N++G +++ + F G+SF D Sbjct: 178 TAIGSEPHDASISSREHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIAD 236 >gi|168698866|ref|ZP_02731143.1| NAD synthetase [Gemmata obscuriglobus UQM 2246] Length = 685 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 23/145 (15%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTL--KSDTHDGGAGIVVGFP 89 A QG++L++F E ++GY DL +S +A A+ + KS T G +V G P Sbjct: 34 RAETQGVNLLVFPECGLTGYTCHDLFHLQSLQRAAEEALAKVVEKSGTVFRGVALV-GLP 92 Query: 90 RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFI---------SGYSNDPIVF 140 + + N ++ AG ++ + K LPNY EF++ R F + + + F Sbjct: 93 LAIEGQLFNCAAVIHAGKVLGIVPKTYLPNYKEFYDARYFCPADNANFSAASCAGQSVPF 152 Query: 141 R-----DIR------LGILICEDIW 154 D R LG+ ICED+W Sbjct: 153 GTNLLFDCRTMNGFTLGVEICEDLW 177 >gi|119387611|ref|YP_918645.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paracoccus denitrificans PD1222] gi|119378186|gb|ABL72949.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paracoccus denitrificans PD1222] Length = 306 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 27/237 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISG-YPPEDLVFKKS 61 K + I AQ + +GD+ N+ + G+D+++ EL ++G Y E+L+ Sbjct: 20 KTITIGAAQFSSEIGDVDANLDRHLHWIARGREAGLDMLVMPELSLTGHYGSENLL---- 75 Query: 62 FIQACSSAIDTLKSDTHDGGA-GIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPN 119 A S LK G + +GF + N+ IL G +I + K+NLP Sbjct: 76 -DAAMSRKDPRLKRLAEAAGPMAVTLGFIEEGPAAQFYNAAAILCDGRMIHLHRKVNLPT 134 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS- 177 Y + E + + G + R G+LIC D+W N + GA L +S Sbjct: 135 YGKLEEGKHYAPGRFVETCELDGYWRAGLLICADVW-NPALTHLAFLHGATLLICPVSSG 193 Query: 178 ----------PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P + + ++ G P++ VN+ G + +L F G S D Sbjct: 194 EEAVGVDFDNPGGWALTCRFYAMIYGA------PVVMVNRTGTERDLTFWGGSRIID 244 >gi|325273662|ref|ZP_08139875.1| NAD synthetase [Pseudomonas sp. TJI-51] gi|324101208|gb|EGB98841.1| NAD synthetase [Pseudomonas sp. TJI-51] Length = 275 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 EA+ V ++D + +++G+SGG+DS A +A A+ + +T Sbjct: 25 EAEVARRVAFIKDCLANARLKTLVLGISGGVDSLTAALLAQRAINELRAETGDQAYTFIA 84 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG------I 377 + LPY+ + DA AC + + D + D+ +L ++ + E SG Sbjct: 85 VRLPYQVQHDE--HDAQACLDVI--RADEVHTVDIAPAVRALAAEVV-ELKSGSPALVDF 139 Query: 378 VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 V N+++R R ++ +++ T + +E +G+ T +GD + PL L K QV Sbjct: 140 VVGNVKARTRMVAQYTIAGARAGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQV 199 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 +A S G P S++EK P+A+L P + D+ S Sbjct: 200 RAIA---RSFG-----------APESLVEKVPTADLEDLAPGKPDEAS 233 >gi|218234943|ref|YP_002368838.1| hydrolase, carbon-nitrogen family [Bacillus cereus B4264] gi|218162900|gb|ACK62892.1| hydrolase, carbon-nitrogen family [Bacillus cereus B4264] Length = 259 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K D H G I +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 VETKEKLIEWAKQYDVHIVGGSI----AKQTEQGVTNTMYVVNNEGQLVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 215 >gi|307244019|ref|ZP_07526138.1| NAD+ synthetase [Peptostreptococcus stomatis DSM 17678] gi|306492543|gb|EFM64577.1| NAD+ synthetase [Peptostreptococcus stomatis DSM 17678] Length = 252 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 26/189 (13%) Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL------PIH 356 IDSA+ A + +A ++ IM ++PQ D GC D L P Sbjct: 35 IDSAVVAYLIKEAFPDNSMGVIM--NIKSNPQDKIDGMKVID--GCGIDYLEFDLDQPQV 90 Query: 357 DLVNHFFSLMSQ--FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D++N + +EE + N+++RIR + + ++N+ ++ T N +E+ G Sbjct: 91 DILNMVTDKLRDKGLYREESLKMTDANLRARIRMSTVYTVANNLGYLVAGTDNAAELHTG 150 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y T +GD F P+ +L K +VF+ W GI L + K+PSA L Sbjct: 151 YFTKHGDGGVDFLPIANLTKGEVFE---WAKELGIHEDL-----------INKAPSAGLW 196 Query: 475 PHQTDQESL 483 QTD+ + Sbjct: 197 EGQTDESEM 205 >gi|163783181|ref|ZP_02178175.1| hypothetical protein HG1285_14194 [Hydrogenivirga sp. 128-5-R1-1] gi|159881515|gb|EDP75025.1| hypothetical protein HG1285_14194 [Hydrogenivirga sp. 128-5-R1-1] Length = 248 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 15/184 (8%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 L+L E+F G+ + L + F I+ LK + I P +EG+ N+ Sbjct: 35 LVLLPEMFFCGFDYDRL---EEFALLSEYIIEKLKLTSRQKNLLICGTVPEHTEEGIKNT 91 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 +++ G +I R K+ L + F E R F+ G N + R+GILIC ++ + +++ Sbjct: 92 AFLIEDGKVIGRRSKVKL--FYPFEEDRYFVPGEENPVFKTKFGRVGILICFEL-RFTDM 148 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL-PIIYVNQVGGQDELIFDG 218 LKK+G + L P ++ H V Q + L + V+ G+ F G Sbjct: 149 VLDLKKKGIDILL----VPAQWGYARREHLRVLSQARAIELQSYVVVSDTWGE----FKG 200 Query: 219 ASFC 222 F Sbjct: 201 TKFA 204 >gi|210635287|ref|ZP_03298483.1| hypothetical protein COLSTE_02414 [Collinsella stercoris DSM 13279] gi|210158448|gb|EEA89419.1| hypothetical protein COLSTE_02414 [Collinsella stercoris DSM 13279] Length = 660 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 119/585 (20%), Positives = 237/585 (40%), Gaps = 68/585 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ++ +GD G ++ R A+ G DL+ + G P LV F Sbjct: 1 MKLALAQIDARLGDFDGICSRVERQLHVAHDAGADLLCLPAPLLCGVTPGALVESGDFEH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + + G ++ + G L V +L G ++ +R + H Sbjct: 61 DMLKSLHRISKVAEELGIACLMPAVLSLEAGQLFEVFLLRGGRVVPLRLTMV------RH 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLNASPYYHN 182 + +S +S P VF I + D+ ++ + G + + ++N + Sbjct: 115 GESMPVSPWS--PPVFEVSGTRIAVTFDVARDMGAIPN----GCDLVLYCAVNGFDVTNE 168 Query: 183 KLKKRHEIVTG----QISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + + G ++ + + + VGG D+ ++ G SF D ++ Q F E Sbjct: 169 QTAGVAAVPGGAFRSEVERAGVWLACMEPVGGFDDAVYTGGSFVMDDGGRVVAQAPCFEE 228 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIP-LQEEEADYNACVLSLRDYVQKNNFHKVII 297 + + M D+ +P + + + A L LRD V+ N +V++ Sbjct: 229 VLLIQDVR--------RGMMVDALEMHEVPSFRRDRWLWEALRLHLRDAVEANGSRRVLV 280 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYK---YTSPQSLE-DAAACAKALGCKYDVL 353 L G + S+L AA+AVDALG NV +++ ++ + ++LE + AACA+ + + Sbjct: 281 PLRGDLPSSLLAALAVDALGSRNVLGLLVGHEDALTAADEALETERAACAREVASSLHM- 339 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 LV + + V+ ++++ I ++ S AM L K++ ++ Sbjct: 340 ---RLVERAAPSSALLADSDRPARVSPSLRAGIDALLVADTSRELAAMPLAPLTKTDYAL 396 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + +G +P D+Y + + LA R SG P V ++ KS AE+ Sbjct: 397 RANAIAASPAGALSPFGDVYLSGLEWLAKAR---ACASGTMPERLVGLDAV--KSAYAEV 451 Query: 474 RPHQTDQESLPPYPILDDIIK----RIVENE---------ESFINNDQEYNDETVRYVE- 519 Q +DD++ R+++ E+ ++ + + +D + V Sbjct: 452 IRDAIAQLD------VDDVLGQRACRLLQTVEPAVLDATLEAHVDRNADIDDLPLSGVSP 505 Query: 520 -------HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E RR P ++A+ F +RL+P+ + D Sbjct: 506 EASALFLMLVRQNERGRRMLPPAPIVSARGFA-ERLWPMQLAWSD 549 >gi|118572820|sp|Q3HVN1|AGUB_SOLTU RecName: Full=N-carbamoylputrescine amidase gi|76160960|gb|ABA40443.1| beta-alanine synthase-like protein [Solanum tuberosum] Length = 300 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 19/222 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSFIQACSSAIDTLK 74 D++ N+A A R A+++G ++IL ELF Y ++ F ++ I ++ Sbjct: 20 DVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKEEFFHRAKPYLGHPTIVRMQ 79 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGY 133 + + G I V F + NSV I+DA G + + K ++P+ + EK F G Sbjct: 80 NLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGD 139 Query: 134 SNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRH- 188 + + + ++G+ IC D W + + QGAE LF ++ + P + H Sbjct: 140 TGFKVFQTKYAKIGVAICWDQW-FPEAARAMALQGAEVLFYPTAIGSEPQDDGLDSRDHW 198 Query: 189 -EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 ++ G +P++ N++G G E+ F G SF Sbjct: 199 RRVMQGHAGANVVPLVASNRIGKEIIETEHGNSEITFYGYSF 240 >gi|294654354|ref|XP_456405.2| DEHA2A01540p [Debaryomyces hansenii CBS767] gi|199428815|emb|CAG84357.2| DEHA2A01540p [Debaryomyces hansenii] Length = 716 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 125/591 (21%), Positives = 208/591 (35%), Gaps = 133/591 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + EA + G L + EL I GY D + Sbjct: 5 ITLATCNLNQWALDFEGNRDRIITSIIEAKKLGATLRVGPELEICGYGCLDHFLENDLYD 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + ++ + + VG P + N ++ G I+ +R K+ L N + Sbjct: 65 HSWEMYGHILTNPNTQDILLDVGMPIIHKSIKYNCRLLSYNGKILLIRPKLYLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSNDPIVFRDI-------RLGILICEDIWKNS 157 E R F ++G SN + F D LG CE+++ Sbjct: 125 EMRYFTPWNRPKYYESFQLPKNISSVTGQSN--VTFGDCVIQTLETTLGAETCEELFTPQ 182 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIF 216 + + G E + + S + KL R +++TG +Y NQ G D L + Sbjct: 183 SPHISMALDGVEIFTNSSGSHHELRKLDTRLQLITGATKKCGGVYLYANQKGCDGDRLYY 242 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFM----------TEWHYDQQLSQWNYMS-DDSASTM 265 DG + C ++ Q FS ++ + +Q+ S + +S DS Sbjct: 243 DGCA-CIIVNGKVVAQASQFSLRDVEVVSATIDLDDVRSYRNQKSSAFQSVSQSDSTVYH 301 Query: 266 YIPL----------------------------QEEEADYNACVLSLRDYVQKNNFHKVII 297 +IP +EE A AC L DY++++ + Sbjct: 302 HIPTDIELSPNSNVFNPNVKPSPYRDIRYHLPEEEIALGPACW--LWDYLRRSKCAGYFL 359 Query: 298 GLSGGIDSALCAAI-------AVDALGKENVQTI-----------MLPYK---------Y 330 LSGGIDS A I V + + + Q I +P Y Sbjct: 360 PLSGGIDSCATAVIVHSMCRLVVKSCEEGDKQVISDIQSLTHDPEFVPKTPQEVAGRLFY 419 Query: 331 TSPQSLED--------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-------- 374 TS E+ A ++ +G + + + LV+ S+ ++P Sbjct: 420 TSFMGTENSSKETRSRAKELSEKVGSHHIDMNMDSLVSAVVSVFEVATGKKPIFKIFGGS 479 Query: 375 --SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSG 424 + +NIQ+R+R +L N S +L L ++N E GY T Y S Sbjct: 480 QTENLALQNIQARLRMVLSYLFAQLLPWTRNISGGLLVLGSANVDECLRGYLTKYDCSSA 539 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 NP+ + KT + + W + + I L +P+AEL P Sbjct: 540 DINPIGGISKTDLKRFIDWADKN--------FELPILHDFLTATPTAELEP 582 >gi|26991549|ref|NP_746974.1| NAD synthetase [Pseudomonas putida KT2440] gi|46396390|sp|Q88DF6|NADE_PSEPK RecName: Full=NH(3)-dependent NAD(+) synthetase gi|24986634|gb|AAN70438.1|AE016685_3 NH(3)-dependent NAD(+) synthetase [Pseudomonas putida KT2440] Length = 275 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 31/225 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 EA+ V ++D + +++G+SGG+DS A +A A+ + +T Sbjct: 25 EAEVARRVAFIKDCLANARLKTLVLGISGGVDSLTAALLAQRAINELRAETGDKAYTFIA 84 Query: 324 IMLPYKYTSPQSLEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAE 380 + LPY+ + DA AC + + + + I V + ++ P+ + V Sbjct: 85 VRLPYQVQHDE--HDAQACLEVIKADEVHTVDIAPAVRALAAEVAALKNGSPTLVDFVVG 142 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N+++R R ++ +++ T + +E +G+ T +GD + PL L K QV + Sbjct: 143 NVKARTRMVAQYTIAGARAGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAI 202 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 A S G P S++EK P+A +L P + D+ S Sbjct: 203 A---RSFG-----------APESLVEKVPTADLEDLEPGKPDEAS 233 >gi|308172177|ref|YP_003918882.1| ammonium-dependent NAD+ synthetase [Bacillus amyloliquefaciens DSM 7] gi|307605041|emb|CBI41412.1| ammonium-dependent NAD+ synthetase [Bacillus amyloliquefaciens DSM 7] gi|328910250|gb|AEB61846.1| ammonium-dependent NAD+ synthetase [Bacillus amyloliquefaciens LL3] Length = 272 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 45/266 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSLE 337 L+ Y++K ++G+SGG DS L A +A +++ +E N + I + + + Q + Sbjct: 30 LKQYLKKIGAKGFVLGISGGQDSTLAGRLAQMAAESIREEGGNAEFIAVRLPHGTQQDED 89 Query: 338 DAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DA K + YD+ P V+ F + ++ S N+++R+R A Sbjct: 90 DAQMALKFIKPDKSWTYDIKPA---VSAFADQYKKETGDQLSDFNKGNVKARMRMIAQYA 146 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + +++ T + +E G+ T YGD PL L K Q +L Sbjct: 147 VGGQEGLLVIGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRRL------------- 193 Query: 454 GPLTEVIPPSILE-KSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQ 508 L E+ P L K P+A+L +P QTD+ L Y +DD ++ + Sbjct: 194 --LEELGAPERLYLKLPTADLLDDKPQQTDETELGITYNDIDDYLE------------GK 239 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPV 534 + + E + +E SE+K RQ P Sbjct: 240 DVSSEVIEALEKRYLSSEHK-RQVPA 264 >gi|220909739|ref|YP_002485050.1| N-carbamoylputrescine amidase [Cyanothece sp. PCC 7425] gi|219866350|gb|ACL46689.1| N-carbamoylputrescine amidase [Cyanothece sp. PCC 7425] Length = 310 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 17/213 (7%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSFIQACSSAIDTLKSDTH 78 N+ + EA QG +IL +ELF Y + F ++ I ++ Sbjct: 44 NVKRISGWVREAAAQGAQVILPSELFEGHYFCREEREECFARARSATAHPTITHFQALAE 103 Query: 79 DGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDP 137 G I V F + NSV I+DA G+++ V K ++P+ + EK F G N Sbjct: 104 QLGVVIPVSFFEKAGPAYYNSVAIVDADGSLLGVYRKSHIPDGPGYEEKFYFRPG--NTG 161 Query: 138 IVFRDIRLGIL---ICEDIWKNSNICKHLKKQGAEFLFSLNA------SPYYHNKLKKRH 188 + R G+L IC D W + + GAE L A P K + Sbjct: 162 FKVWETRYGVLGVGICWDQW-FPECARAMTLMGAELLLYPTAIGSEPHDPDLDTKDPWQR 220 Query: 189 EIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 ++ +S+V +P+I N++G ++ +F G+SF Sbjct: 221 AMIGHAVSNV-IPVIAANRIGTEEGQVFYGSSF 252 >gi|326783916|ref|YP_004324310.1| NAD+ synthetase [Synechococcus phage S-SSM7] gi|310003928|gb|ADO98323.1| NAD+ synthetase [Synechococcus phage S-SSM7] Length = 253 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 13/168 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--IMLPYKYTSPQ-SLEDA 339 L Y NN ++G+SGGIDSA+ + +AV + + T I +P Q +L DA Sbjct: 18 LCKYAHDNNVDSFVVGVSGGIDSAVASTLAV----RTGLPTYVIGMPLNQNIEQETLSDA 73 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSG--IVAENIQSRIRGNILMAL 394 A DL + LMS E E +G + N +SR+R L + Sbjct: 74 HMFWLAKNYPNVKHLKADLSESYAKLMSDLTNEFGLEYTGNPLAKANTKSRLRMVTLYHV 133 Query: 395 SNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 + + +++ T NK E VG+ T YGD P+ DLYK++V +L Sbjct: 134 AANVGGIVVGTGNKVEDYGVGFYTKYGDGGVDIAPIADLYKSEVRELG 181 >gi|50291493|ref|XP_448179.1| hypothetical protein [Candida glabrata CBS 138] gi|49527490|emb|CAG61130.1| unnamed protein product [Candida glabrata] Length = 713 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 130/598 (21%), Positives = 206/598 (34%), Gaps = 137/598 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + A +G L + EL ISGY D + Sbjct: 5 VTLATCSLNQWALDFEGNRDRILESIRIAKERGARLRVGPELEISGYGCLDHFLENDVCL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + G + +G P + N ++ G I+ +R KI L N + Sbjct: 65 HSWEMYAQILKNPETHGLILDIGMPLLHKNVRYNCRLLSLDGKILFIRPKIWLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSNI 159 E R F I+G P I D +G CE+++ + Sbjct: 125 EMRFFTPWMKPGVVEELTLPPMIQKITGQKKVPFGDAVINTLDTCIGAETCEEVFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV---TGQISHVHLPIIYVNQVGGQ-DELI 215 + G E + + + S + KL KR E++ TG+ V+L Y NQ G D L Sbjct: 185 HIAMSLDGVEIITNSSGSHHELRKLNKRLELILNGTGRCGGVYL---YANQKGCDGDRLY 241 Query: 216 FDGASFCFDGQQQLAFQMKHFS-------------------EQNFMTEW----------- 245 +DG + + LA Q K FS N M+ Sbjct: 242 YDGCALIAINGKILA-QGKQFSLDDVEVVTATVDLEEVRNHRANVMSRGLQSSLADLKYE 300 Query: 246 HYDQQL------SQWN--YMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 H D ++ S++N S Y +EE A AC L DY+++ N + Sbjct: 301 HIDVEIELAPRGSRFNPKITPTKSRDVTYHTPEEEIALGPACWLW--DYIRRCNGTGYFL 358 Query: 298 GLSGGIDSALCAAI----------------------------AVDALGKENVQ------- 322 LSGGIDS A I + D EN Q Sbjct: 359 PLSGGIDSCATAMIIHSMCRLVHKACHEGNDLVLKDIRRITRSPDDWIPENPQEIANKMF 418 Query: 323 -TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP------- 374 T + + +S ++ + A+ +G + L + LV+ SL +P Sbjct: 419 HTCFMGTENSSVETRSRSKQLAEKIGSYHVDLNMDGLVSSVVSLFEVATGRKPIFKIFGG 478 Query: 375 ---SGIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + +NIQ+R+R + + + N ++L ++N E GY T Y Sbjct: 479 SQIENLALQNIQARLRMVLAYLFAQLLPWVRGIPNSGGLLVLGSANVDECLRGYLTKYDC 538 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 S NP+ + KT + + + I L +P+AEL P D Sbjct: 539 SSADVNPIGGISKTDLKGFIKYASEE--------YDMPILDEFLNATPTAELEPITKD 588 >gi|254828876|ref|ZP_05233563.1| hydrolase [Listeria monocytogenes FSL N3-165] gi|258601288|gb|EEW14613.1| hydrolase [Listeria monocytogenes FSL N3-165] Length = 296 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 24/206 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + EA+++G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIKYIREAHKKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I+A S+ + TLK + GI + + ++ + N+ +I+D Sbjct: 61 PLATGFGAERFKWLNEAIEADSAYVLTLKELAKELQIGICATYLSKTEQKIQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR 187 +GAE + NA +P N+L R Sbjct: 177 LKGAEIILVPNACDMNPARLNQLNSR 202 >gi|325568799|ref|ZP_08145092.1| NH(3)-dependent NAD(+) synthetase [Enterococcus casseliflavus ATCC 12755] gi|325157837|gb|EGC69993.1| NH(3)-dependent NAD(+) synthetase [Enterococcus casseliflavus ATCC 12755] Length = 274 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 103/243 (42%), Gaps = 38/243 (15%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+ Y+QKN+F H ++G+SGG DS L IA + G N Q I + Y Sbjct: 30 LKAYLQKNSFLHTFVLGISGGQDSTLAGRIAQLTMEEMRSETGNPNYQFIGVRLPYGEQA 89 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGN 389 EDA + + K D I VN ++ +Q E +G+ NI++R R Sbjct: 90 DEEDAKKAIEFI--KPD---IELRVNIKAAVDAQVQAVEEAGLAVSDFNKGNIKARQRMI 144 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ +L T + +E G+ T YGD PL L K Q QL + + Sbjct: 145 TQYAIAGEKAGAVLGTDHAAENITGFFTKYGDGGADILPLFRLNKRQGRQLLQYLGA--- 201 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESF 503 P ++ K P+A+L +P D+ +L Y +DD + K I + + Sbjct: 202 -----------PEALYTKVPTADLEDGKPLVADEAALGVTYNDIDDYLEGKEIADEAQQT 250 Query: 504 INN 506 I N Sbjct: 251 IEN 253 >gi|253729691|ref|ZP_04863856.1| NAD synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253726577|gb|EES95306.1| NAD synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 273 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 +++YVQ ++F K +++G+SGG DS L + +V+ L +E + + LPY Sbjct: 31 IKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVDQALRF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG +P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LG-----VPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|323494360|ref|ZP_08099472.1| NAD synthetase [Vibrio brasiliensis LMG 20546] gi|323311523|gb|EGA64675.1| NAD synthetase [Vibrio brasiliensis LMG 20546] Length = 275 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 41/235 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKEN-----VQTIMLPYKYTSPQ 334 ++ +Q + +++G+SGG+DS C A +AVD L +E+ + LPY Q Sbjct: 28 IKKMLQNSGCKSLVLGISGGVDSTTCGRLAQLAVDQLNEESNGGYQFIAVRLPY---GEQ 84 Query: 335 SLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQ 383 ED A A ++ K V +H +H + L EE + I V N++ Sbjct: 85 KDEDEAQLALQFIQPTHSVSVNIKAGVDGLH-AASHIALDGTGLLPEESAKIDFVKGNVK 143 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R R ++ + +++ T + +E G+ T +GD + PL L K QV ++A+ Sbjct: 144 ARARMIAQYEIAGYVGGLVIGTDHSAENITGFYTKFGDGACDMAPLFGLSKRQVREIAAT 203 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 204 LGA--------------PELLVKKVPTADLEELAPQKADEDALNLSYDQIDDFLE 244 >gi|327313812|ref|YP_004329249.1| putative N-carbamoylputrescine amidase [Prevotella denticola F0289] gi|326945622|gb|AEA21507.1| putative N-carbamoylputrescine amidase [Prevotella denticola F0289] Length = 294 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 45/291 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K+LKI I Q + V D N+ + + +G +L++ EL S Y Sbjct: 1 MKELKIGILQQHNVA-DTRTNMKRLAEGIADLAHRGAELVILQELHNSLY---------- 49 Query: 62 FIQACS------------SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGN 107 F Q S + D + + G IV + G+ + +VVI G+ Sbjct: 50 FCQTESVENFDLAEPIPGPSTDFYGNLARELGVVIVTSLFEKRAPGLYHNTAVVIEKDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G P+ RLG+L+C D W + + Q Sbjct: 110 IAGRYRKMHIPDDPAYYEKFYFTPGDLGFHPVDTSVGRLGVLVCWDQWY-PEAARLMALQ 168 Query: 167 GAEFLFSLNASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE----- 213 GAE L A Y K ++R T H LP+I VN+VG + + Sbjct: 169 GAEILVYPTAIGYESSDTDEEKQRQREAWTTVMRGHAVANGLPVIAVNRVGNEPDPSEQT 228 Query: 214 --LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSD 259 + F G+SF Q +L ++ E++ + H +Q W ++ D Sbjct: 229 GGIQFWGSSFAAGPQGELLYRASESKEESVVVSINLDHSEQVRRWWPFLRD 279 >gi|298489167|ref|ZP_07007187.1| 5-aminopentanamidase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156304|gb|EFH97404.1| 5-aminopentanamidase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 264 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q +P+ DI+GN+ + + + A QG L++ E+F++GY + Sbjct: 1 MRIALYQCSPLPLDISGNLTRLEQQAQAAAEQGAQLLICPEMFLTGYNIGAQAVSELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + V N+V ++D+ L NY + Sbjct: 61 QDGPAASRIAAIAQASGIAILYGYPERGPDQQVYNAVQLIDS-------RGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFAAGEDHYPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + ++ R H ++Y N G + + + G +S C DG + L Sbjct: 173 MLPYDFVCEVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLSSLCAPDGSRPL 224 >gi|20092513|ref|NP_618588.1| NAD synthetase [Methanosarcina acetivorans C2A] gi|19917782|gb|AAM07068.1| NH(3)-dependent NAD(+) synthetase [Methanosarcina acetivorans C2A] Length = 371 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 81/328 (24%), Positives = 134/328 (40%), Gaps = 76/328 (23%) Query: 269 LQEEEADYNACVLSLRDYV--QKNNFHK--VIIGLSGGIDSALCAAIAVDALGKENVQTI 324 L+E D + SLR ++ Q F K V++G+SGG+DSA+ + V GKE V + Sbjct: 53 LEELNRDIDKLAASLRGFIREQVTAFKKKGVVLGVSGGVDSAVTLTLCVQEFGKEKVYGL 112 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN-----------------------H 361 +LP K ++P S A ++LG Y+ +PI ++ H Sbjct: 113 LLPEKESAPSSKTLGAEICESLGVSYEEVPISPILEALNIYEKKDQVLKRACPEYDPEIH 172 Query: 362 FFSL-MSQFLQEEPSGI-----------VA---------------ENIQSRIRGNILMAL 394 SL + FL E + VA + ++ R R + Sbjct: 173 KTSLVLPDFLDRELLNVPYIRLIKDGETVAKHRLKAADYLELIGLQGVKQRSRMLVQYMY 232 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + ++ T+NK+E+ +G YGD PL D YKTQV+ LA LG Sbjct: 233 AEKMNYVVCGTTNKTEVVLGQYVKYGDGGVDLEPLADCYKTQVYALA---------KHLG 283 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESL---PPYPILDDII-----KRIVENEESFINN 506 + +I+++ PSA+ H T E P I+D ++ +E E Sbjct: 284 -----VNEAIIKRPPSADTWSHYTTDEEFYWRMPMHIIDQLLYSREHNMSLEVTEKNTGL 338 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPV 534 ++ ++ R+++ + +EY R PV Sbjct: 339 PRDTIEKAWRHIDRVKDTTEYIRAVPPV 366 >gi|302812436|ref|XP_002987905.1| hypothetical protein SELMODRAFT_269334 [Selaginella moellendorffii] gi|300144294|gb|EFJ10979.1| hypothetical protein SELMODRAFT_269334 [Selaginella moellendorffii] Length = 295 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 22/240 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAG-NIAKARRAREEANRQGMDLILFTELFISGY----PPEDL 56 ++ +++++ L D A N+A A R EA+ +G ++IL ELF Y ED Sbjct: 1 MESREVSVSSLQFACSDRADENVATAERLVREAHSRGANIILIQELFEGYYFCQAQREDF 60 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 F S + I +K + G I V F + NS+VI+DA G + + K Sbjct: 61 -FLCSKPREGHPTIQRMKELAKELGVVIPVSFFEEANNAHYNSIVIIDADGTDLGLYRKS 119 Query: 116 NLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ + EK F G + + + R+G+ IC D W + + GAE LF Sbjct: 120 HIPDGPGYQEKFYFNPGDTGFKVFDTKFARIGVAICWDQW-FPEAARAMALMGAEVLFYP 178 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 ++ + P + H ++ G +P++ N++G G ++ F G SF Sbjct: 179 TAIGSEPQDSGLDSREHWQRVMQGHAGANVIPLVTSNRIGVEVVETEHGASKITFYGHSF 238 >gi|315125186|ref|YP_004067189.1| NAD synthetase [Pseudoalteromonas sp. SM9913] gi|315013699|gb|ADT67037.1| NAD synthetase [Pseudoalteromonas sp. SM9913] Length = 278 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 34/220 (15%) Query: 295 VIIGLSGGIDSALCA---AIAVDALGKENVQT------IMLPYKYTSPQSLEDAAA--CA 343 +++G+SGG+DS+ C +A+D L +E+ T + LPY + +S A Sbjct: 40 LVLGISGGVDSSTCGRLCQLAIDELNQEHPDTHYQFIAVRLPYGVQADESEAQMAVDFIK 99 Query: 344 KALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPS----GIVAENIQSRIRGNILMALSNHS 398 + ++ P D L + ++ Q PS + N+++R R ++ Sbjct: 100 PSTRMTVNIKPATDALHEQTMATLAGTEQTLPSQDKIDFIKGNVKARQRMIAQYEIAGFC 159 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 + +++ T + +E G+ T +GD + PL L K QV LA+ + Sbjct: 160 QGLVVGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVRALATTLGA------------ 207 Query: 459 VIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P ++EK+P+A+L RP TD+E+L Y +DD ++ Sbjct: 208 --PALLVEKAPTADLESDRPGLTDEEALGLSYEEIDDFLE 245 >gi|229019244|ref|ZP_04176073.1| Carbon-nitrogen hydrolase [Bacillus cereus AH1273] gi|229025490|ref|ZP_04181900.1| Carbon-nitrogen hydrolase [Bacillus cereus AH1272] gi|228735772|gb|EEL86357.1| Carbon-nitrogen hydrolase [Bacillus cereus AH1272] gi|228742054|gb|EEL92225.1| Carbon-nitrogen hydrolase [Bacillus cereus AH1273] Length = 280 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 15/227 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY DL Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGY---DLTRLSEI 76 Query: 63 IQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 A ++T LK + G IV G +Q ++GV N++ +++ G ++ K++L Sbjct: 77 --ADREGVETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNKEGELVNEYSKVHL 134 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + E + I+G S D+ IC DI + H K GA+ LF + Sbjct: 135 --FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEW 191 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L ++ + ++ N+ G F G S D Sbjct: 192 PLV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|15614848|ref|NP_243151.1| NAD synthetase [Bacillus halodurans C-125] gi|17369103|sp|Q9KAK2|NADE_BACHD RecName: Full=NH(3)-dependent NAD(+) synthetase gi|10174905|dbj|BAB06004.1| NH3-dependent NAD synthetase [Bacillus halodurans C-125] Length = 272 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 43/269 (15%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKY 330 V L++Y++ + ++GLSGG DS L A +A+D L +E T + LPY Sbjct: 25 VTFLKNYLKHSGAKGYVLGLSGGQDSTLAGKLAQMAIDELNEEEQDTSYVFIAVRLPYGV 84 Query: 331 TSPQS-LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 ++ +DA A K + + I D V+ Q E S N ++R R Sbjct: 85 QKDEADAQDAIAFIKP--SRSITVNIKDAVDASTKSFEQATGEVLSDFNKGNTKARERMK 142 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 + H +++ T + +E G+ T +GD + PL L K R + Sbjct: 143 AQYDVGAHYGCLVIGTDHAAEAITGFFTKHGDGACDVAPLFGLTK---------RQGKSL 193 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFIN 505 LG P + K+P+A+L RP D+E+L Y LDD ++ Sbjct: 194 LKELGA-----PTHLYTKAPTADLEDDRPGLPDEEALGLTYEQLDDYLE----------- 237 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 ++ +D + +E +E+K RQ PV Sbjct: 238 -GKQVHDAIRKKIESRYLATEHK-RQLPV 264 >gi|222153443|ref|YP_002562620.1| carbon-nitrogen hydrolase family protein [Streptococcus uberis 0140J] gi|222114256|emb|CAR42865.1| carbon-nitrogen hydrolase family protein [Streptococcus uberis 0140J] Length = 291 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 34/230 (14%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK-SFIQACSS--AIDTLKSDTH 78 NI KA R EA +G +IL ELF Y ++ ++ F A AI K+ Sbjct: 20 NIEKAERLVREAAAKGAQIILLPELFERPYFCQERQYEYYQFATATEDNLAIKHFKAIAK 79 Query: 79 DGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDP 137 + I + F +D + NS+ ++DA G+I+ V K ++P+ + EK F G + Sbjct: 80 ELSIVIPISFYEKDGNVLFNSIAVIDADGSILGVYRKTHIPDDHYYQEKFYFTPGNTGFK 139 Query: 138 IV-FRDIRLGILICEDIW-KNSNICKHLKKQ---------GAEFLFSLNASPYYHNKLKK 186 + R +GI IC D W + C L G+E + ++S ++ ++ Sbjct: 140 VWETRYGNIGIGICWDQWFPETARCLALAGAELLLYPTAIGSEPILETDSSGHWQRTMQ- 198 Query: 187 RHEIVTGQISHVHLPIIYVNQVG----------GQ--DELIFDGASFCFD 224 G + +P+I N++G GQ EL+F G+SF D Sbjct: 199 ------GHAAANIIPVIAANRIGREVVTPSIENGQQASELVFYGSSFMTD 242 >gi|297529908|ref|YP_003671183.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. C56-T3] gi|297253160|gb|ADI26606.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. C56-T3] Length = 302 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 22/243 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ--GMDLILFTELFISGYPPEDLVF 58 M + IA+AQ+ P GDI N+AK E R+ + L+LF EL +GY +++ Sbjct: 1 MNRSFDIALAQMTPANGDIDANLAKMEAIINECKRKFPNVRLLLFPELCTTGYVLSEML- 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 K++ S + + G+ +D G L NS++++D G I KI+ Sbjct: 60 KEAAQTWDGSTFQHMSQLAQTFQLYLAYGYVEKDHTGNLYNSLMLIDPNGQCIGNYRKIH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVF-RDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 L + EK F G +P++ D+ R+G++IC D+ + ++L GAE L Sbjct: 120 LTPF----EKAWFSKG--AEPVLADTDLGRIGLMICWDL-AFPELARYLAVHGAELLLVP 172 Query: 175 NA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQQQLA 230 A SP +H +K + + + NQ+G F G S + DG++ A Sbjct: 173 CAWESP-FHAPFQK---FAMARAIDNTIYVAACNQIGWSSSFHFFGLSSIYGPDGRKIAA 228 Query: 231 FQM 233 M Sbjct: 229 ANM 231 >gi|312960421|ref|ZP_07774930.1| NAD+ synthase (glutamine-hydrolysing) [Pseudomonas fluorescens WH6] gi|311285306|gb|EFQ63878.1| NAD+ synthase (glutamine-hydrolysing) [Pseudomonas fluorescens WH6] Length = 269 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 36/216 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDS----ALCAAIAVDALGKENVQT----IMLPYKYTSPQ 334 ++ +++ +++G+SGG+DS LC +AV+ L +E+ + LPYK + + Sbjct: 31 IKTTLRQAGCTALVLGISGGVDSLAAGRLCQ-LAVEQLRREDYAARFIAMRLPYKTQADE 89 Query: 335 SLEDAAACAKALGCKY-DVLPIHDLVNHFFSLMSQFLQEEPSG----IVAENIQSRIRGN 389 S DA A + + D L I V+ LM+ E S V N+++R R Sbjct: 90 S--DAQASLDFITPDHIDTLNIAASVD---GLMASLSATEASAAHVDFVKGNVKARTRMI 144 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++N +++ T + +E +G+ T +GD + PL L KTQV LA Sbjct: 145 AQYAVANLHNGLVVGTDHGAEALMGFFTKFGDGACDLAPLSGLTKTQVRLLA-------- 196 Query: 450 TSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 S LG P +++ K P+A EL P + D+ + Sbjct: 197 -SALGA-----PATLVRKHPTADLEELAPGKLDEHA 226 >gi|239614745|gb|EEQ91732.1| glutamine-dependent NAD(+) synthetase [Ajellomyces dermatitidis ER-3] Length = 719 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 126/595 (21%), Positives = 211/595 (35%), Gaps = 131/595 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN V D GN + + A G L + EL I+GY +D + Sbjct: 1 MAPLVTVATCSLNQWVLDFEGNTNRIIDSIRIAKAAGAKLRVGPELEITGYSCQDHFLEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I T+ I +G P + + N+ + + I+ ++ K+ L Sbjct: 61 DLYLHVWQCIATIVDHPDCQDILIDIGAPVRHRNIRYNARIHILNRKILLIKPKMWLAGD 120 Query: 121 SEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWK 155 + ++E R F I+G + PI D +GI CE++ Sbjct: 121 ANYYEYRWFTPWAKPRYVEDYYLERIVGGITGQATVPIGDAVISTYDSAIGIETCEELCT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDE 213 SN H+ G E + + S + KLK+R +++ + +Y NQ G G Sbjct: 181 PSNPGIHMGLNGVEIFTNSSGSHHELRKLKQRIDLIR-HCTRGGGIYLYANQRGEDGNGR 239 Query: 214 LIFDGASFCFDGQQQLA----FQMKHF----------SEQNFMTEWHYDQQLSQW----- 254 L FDG++ F + + F +K ++F T Q SQ Sbjct: 240 LYFDGSAGIFVNGRVVGMSSQFSLKDVDVVTAVIDLEEVRSFRTSVSRSSQGSQAPAYQR 299 Query: 255 ----------------NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 N Y +EE A AC L DY++++ + Sbjct: 300 IEAPISLSRKSDSLNPNIQPSPDIELEYHSPEEEIALGPACW--LWDYLRRSRQSGFFLP 357 Query: 299 LSGGIDSALCAAIA-------VDALGKEN------------------------------- 320 LSGG+DSA A I V A N Sbjct: 358 LSGGLDSASVAVITFSMCRLVVSACHDGNQAVIADMRRIVGEPADSQWLPETPQELCGKI 417 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKY---DVLPIHDLVNHFFSLMSQFLQE----- 372 + T + +S ++ A AK++G + D+ + +++ F+ ++ F Sbjct: 418 LHTCYMGTTNSSKETRNRAKELAKSIGSYHIDLDMDSVVSAISNLFTFVTNFTPRFSVHG 477 Query: 373 -EPS-GIVAENIQSRIRGNI------LMALSNHSKA----MLLTTSNKSEISVGYGTLYG 420 P+ + +NIQ+R R + L+ L ++L + N SE GY T Y Sbjct: 478 GSPTENLALQNIQARSRLVVGYMFAQLLPLVRQRPGGGSLLVLASGNLSEQLRGYLTKYD 537 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 S NP+ + K + + SW + P+ E S + +P+AEL P Sbjct: 538 CSSADLNPIGSIDKLDLVKFLSWAKVNFDI----PIIE----SFVHATPTAELEP 584 >gi|198284244|ref|YP_002220565.1| N-carbamoylputrescine amidase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666922|ref|YP_002426906.1| hydrolase, carbon-nitrogen family [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248765|gb|ACH84358.1| N-carbamoylputrescine amidase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519135|gb|ACK79721.1| hydrolase, carbon-nitrogen family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 290 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 22/243 (9%) Query: 5 LKIAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVF 58 +++ +A + VG D A NIA A + A G +IL ELF + Y P+ L Sbjct: 1 MRVKVAAIQMAVGEDEAANIANALQQVSVAADAGARIILLQELFSTPYFCKDQNPDFLTL 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + + A+ ++ I V F + NS+V+ DA G+ + + K ++ Sbjct: 61 AQP--RDSHPALLAMQKLARQREIVIPVSFFERANNAFFNSLVVFDADGSDLGLYRKAHI 118 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ + EK F G + + R RLG+ IC D W + + +GAE L A Sbjct: 119 PDGPGYQEKFYFSPGDTGFRVFDSRYGRLGVAICWDQW-FPEAARVMALRGAEILLYPTA 177 Query: 177 ------SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQV----GGQDELIFDGASFCFDGQ 226 +P H++ ++ G + +P++ N+V G + E+ F G SF D Sbjct: 178 IGSEPQAPEIHSR-GHWTRVMQGHAAANLIPVVAANRVGREIGRESEITFYGGSFISDAT 236 Query: 227 QQL 229 L Sbjct: 237 GAL 239 >gi|224499659|ref|ZP_03668008.1| hypothetical protein LmonF1_08174 [Listeria monocytogenes Finland 1988] Length = 296 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 29/269 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIQYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I A S+ + TLK + GI + + ++ N+ +I+D Sbjct: 61 PLATGFGAERFKWLDEAIAADSAYVSTLKKLAKELQIGICATYLSKTEQNSQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARILM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +GAE + NA +P N+L R E + G ++ + P + ++FD Sbjct: 177 LKGAEIILVPNACDMNPARLNQLNSRAFENMVG-VAMANYPGENWGRSTAFSPIVFDENG 235 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D + + FSE F+ E++ D+ Sbjct: 236 ---DYRDNTIIETDDFSEGIFIVEFNLDE 261 >gi|315126315|ref|YP_004068318.1| Beta-ureidopropionase [Pseudoalteromonas sp. SM9913] gi|315014829|gb|ADT68167.1| Beta-ureidopropionase [Pseudoalteromonas sp. SM9913] Length = 297 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 30/264 (11%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGY--PPEDL-VFKKSFIQACSSAIDTLKSDTH 78 NI K+ +A QG L++ EL S Y ED+ VF + S+ +TL Sbjct: 23 NIEKSIAGIRDAASQGAQLVVLQELHRSLYFCQTEDVDVFDLAETIPGPSS-NTLGELAK 81 Query: 79 DGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSN 135 + G IV + G+ N+ V+L+ G+I K+++P+ F+EK F G Sbjct: 82 ELGIVIVASLFEKRATGLYHNTAVVLEKDGSIAGKYRKMHIPDDPGFYEKFYFTPGDLGF 141 Query: 136 DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-----YHNKLKKRHEI 190 +PI +LG+L+C D W + + GAE L A + + +++ Sbjct: 142 EPIQTSVGKLGVLVCWDQW-FPEAARLMAMAGAELLIYPTAIGWDPRDDKDEQTRQKDAW 200 Query: 191 VTGQISHV---HLPIIYVNQVG------GQ-DELIFDGASFCFDGQQQLAFQMKHFSEQN 240 V Q +H +P+I N+VG GQ D + F G SF Q ++ + + SEQ Sbjct: 201 VISQRAHAVANGVPVISCNRVGLERDPSGQSDGIQFWGNSFIAGPQGEILAEADNQSEQI 260 Query: 241 FMTEWHYDQQLSQ-----WNYMSD 259 M E DQ+ S+ W Y+ D Sbjct: 261 LMVE--LDQKRSENVRRIWPYLRD 282 >gi|307727228|ref|YP_003910441.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. CCGE1003] gi|307587753|gb|ADN61150.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. CCGE1003] Length = 284 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 16/153 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF--KKSF 62 L+IA AQ PV GD A NIA+A A +G L++F E F+SGY P + K Sbjct: 13 LQIAAAQAQPVCGDTAANIARAVELTAIAAERGARLVVFPEKFLSGYEPGLISGDPAKYA 72 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +A + +D L+ VVG +G+ S +I D R + P + + Sbjct: 73 FEALDARLDPLRETCRRHAIAAVVGAATHGADGLRISSLIFD------CRGEDVAPYHKQ 126 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK 155 + Y ++ ++R G ++ D+W+ Sbjct: 127 YL--------YRSEAQIYRPGTQGCMLELDVWR 151 >gi|163800263|ref|ZP_02194164.1| NAD synthetase [Vibrio sp. AND4] gi|159175706|gb|EDP60500.1| NAD synthetase [Vibrio sp. AND4] Length = 276 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 42/239 (17%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKY 330 V ++ +Q +++G+SGG+DS C A +AVD L +E T + LPY Sbjct: 25 VAFIKRKLQNAGCKALVLGISGGVDSTTCGRLAQLAVDQLNEETGDTKYQFIAVRLPY-- 82 Query: 331 TSPQSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VA 379 Q ED A A ++ K V +H +H S L + + + V Sbjct: 83 -GEQKDEDEAQLALDFIQPTHSVSVNIKAGVDGLHG-ASHVALQGSGLLPTDAAKVDFVK 140 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++R R ++ + ++L T + +E G+ T +GD + PL L K QV + Sbjct: 141 GNVKARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDMAPLFGLSKRQVRE 200 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 +A+ + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 201 VAATLGA--------------PEQLVKKVPTADLEELAPQKADEDALSLTYDQIDDFLE 245 >gi|149371562|ref|ZP_01890978.1| NH(3)-dependent NAD synthetase [unidentified eubacterium SCB49] gi|149355189|gb|EDM43749.1| NH(3)-dependent NAD synthetase [unidentified eubacterium SCB49] Length = 264 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 41/181 (22%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDAL---------------GKENVQT 323 L++Y K+ ++G+SGGIDSA LCA+ + L GKE+++ Sbjct: 14 LKEYAVKSKMDGFVVGVSGGIDSAVTSSLCASTGLRTLCVEMPIHQGPKQVARGKEHIEQ 73 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF--FSLMSQFLQEEPSGIVAEN 381 + + A C D+ P+ + F+ QFL + N Sbjct: 74 LKKRF--------------ANVTDCTVDLTPVFEEFKKQAPFTEDDQFLD-----LSLAN 114 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 ++R+R + L + + ++ T NK E VG+ T YGD +P+ DL K++V+++ Sbjct: 115 TRARLRMSTLYYFAGLHRYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLLKSEVYKV 174 Query: 441 A 441 A Sbjct: 175 A 175 >gi|308481061|ref|XP_003102736.1| hypothetical protein CRE_30004 [Caenorhabditis remanei] gi|308260822|gb|EFP04775.1| hypothetical protein CRE_30004 [Caenorhabditis remanei] Length = 438 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 27/245 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++ ++A +N D GN + + EA+ G + L EL I GY D F+ Sbjct: 6 RRCRVATCTVNNWALDFRGNYERIVKTCSEASELGARIRLGPELEIPGYGCADHFFELDT 65 Query: 63 IQACSSAIDTLKSDTHDGGAGIVV-GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + L + + +V+ G P + + + N G ++ +R K+ L + + Sbjct: 66 ERHSWEMLSKLVEKSKEWPNLLVITGLPTRFRGLLYNCAAAFKNGRLLFIRAKMGLADDN 125 Query: 122 EFHEKRTFISG----------------YSNDPIVFRD--------IRLGILICEDIWKNS 157 + E R F+ + + F D +R+G ICE++W Sbjct: 126 VYRESRWFVKWTETFKHYQMPLNSEFYFEQSYVPFGDGILESSDNVRVGFEICEELWSAR 185 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 + L +QG + + + + S + K R ++++ G + V +Y N G D + Sbjct: 186 STNIRLSEQGVDIMCNGSGSHHILGKSNYRINQLILGSSAKVGGVYLYANHRGCDGDRVY 245 Query: 216 FDGAS 220 +DGAS Sbjct: 246 YDGAS 250 >gi|163789854|ref|ZP_02184290.1| NAD synthetase [Carnobacterium sp. AT7] gi|159874794|gb|EDP68862.1| NAD synthetase [Carnobacterium sp. AT7] Length = 275 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 40/260 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+DY++K +F K +++G+SGG DS L ++ A+ G Q I + Y Sbjct: 31 LKDYIKKYSFLKTLVLGISGGQDSTLVGKLSQLAMTELREETGDNEYQFIAVRLPYGEQA 90 Query: 335 SLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 +DA + +G K +V P D S + S V NI++R R I Sbjct: 91 DEKDAMDAIEFIGADKVVKVNVKPGVDATVQTLEDSSTTV----SDFVKGNIKARQRMII 146 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ K ++ T + +E G+ T +GD NP+ L K Q Sbjct: 147 QYAIAGSHKGAVVGTDHSAESVTGFYTKFGDGGTDINPIFRLNKRQ-------------- 192 Query: 451 SGLGPLTEV-IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE 509 G L E+ P + EK P+A+L + D+ SLP L +I + E +E Sbjct: 193 -GKALLKELEAPKHLYEKIPTADL---EEDKPSLPDEKALGVTYDQIDDYLEG-----KE 243 Query: 510 YNDETVRYVEHLLYGSEYKR 529 E + +E +E+KR Sbjct: 244 VPAEAAQKIESWFVKTEHKR 263 >gi|325288850|ref|YP_004265031.1| N-carbamoylputrescine amidase [Syntrophobotulus glycolicus DSM 8271] gi|324964251|gb|ADY55030.1| N-carbamoylputrescine amidase [Syntrophobotulus glycolicus DSM 8271] Length = 294 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 25/278 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +K+A Q++ G I NIAKA +A G +IL ELF + Y + +KS Sbjct: 1 MRNVKVAATQMS-CTGSIDKNIAKADGLVRQAAAGGAQIILLQELFETPYFCQK---EKS 56 Query: 62 FIQACSSAIDTLKSDTH----DGGAGIV--VGFPRQDQEGVLNSVVILDAGN-IIAVRDK 114 ++ ++ K+ H G +V + F + NSV I+DAG I+ K Sbjct: 57 DYDVYATELEQNKAVNHFKQVAGELQVVLPISFYEKKNYARYNSVAIIDAGGEILGKYRK 116 Query: 115 INLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF- 172 ++P+ + EK F G + + R ++G+ IC D W + + GAE LF Sbjct: 117 SHIPDGPGYEEKFYFNPGDTGFRVWNTRYGKIGVGICWDQWY-PEAARCMALMGAEILFY 175 Query: 173 --SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQ-DE---LIFDGASFCFD 224 ++ + P + K H + G + LP++ N+VG + DE + F G+SF Sbjct: 176 PTAIGSEPQDKSIDSKEHWQACMLGHAAANLLPVVASNRVGVEADEDSRITFYGSSFIAG 235 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQ---WNYMSD 259 Q + E + ++ DQ +Q W D Sbjct: 236 PQGNKVAEAGRTEETVLVADFDLDQLATQRLEWGIFRD 273 >gi|170723822|ref|YP_001751510.1| NAD synthetase [Pseudomonas putida W619] gi|229470271|sp|B1J649|NADE_PSEPW RecName: Full=NH(3)-dependent NAD(+) synthetase gi|169761825|gb|ACA75141.1| NAD+ synthetase [Pseudomonas putida W619] Length = 275 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 31/225 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS---ALCAAIAVDALGKENVQ------T 323 EA+ V ++D + +++G+SGG+DS AL A A++ L E+ Sbjct: 25 EAEVARRVAFIKDCLANARLKTLVLGISGGVDSLTAALLAQRAINELRAESSDPAYRFIA 84 Query: 324 IMLPYKYTSPQSLEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAE 380 + LPY+ + DA AC + + + + I V + + PS + V Sbjct: 85 VRLPYQVQHDE--HDAQACLEVINADEVHTVDIAPAVRALAAEVQALKDGSPSLVDFVVG 142 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N+++R R ++ +++ T + +E +G+ T +GD + PL L K QV + Sbjct: 143 NVKARTRMVAQYTIAGARAGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAI 202 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 A S G P S++EK P+A +L P + D+ S Sbjct: 203 A---RSFG-----------APESLVEKVPTADLEDLEPGKPDEAS 233 >gi|269962837|ref|ZP_06177177.1| NH(3)-dependent NAD(+) synthetase [Vibrio harveyi 1DA3] gi|269832391|gb|EEZ86510.1| NH(3)-dependent NAD(+) synthetase [Vibrio harveyi 1DA3] Length = 276 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 50/240 (20%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSP 333 ++ +Q+ +++G+SGG+DS C A +AVD L +E + + LPY Sbjct: 28 IKRKLQEAGCKSLVLGISGGVDSTTCGRLAQLAVDQLNEEAGDSSYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACAKALGCKYDVLPIHDL-------------VNHFFSLMSQFLQEEPSGI--V 378 Q ED A A A + P H + +H + L E + + V Sbjct: 85 QKDEDEAQLALAF-----IQPTHSVSVNIKAGVDGLHAASHVALEGTGLLPTEAAKVDFV 139 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 N+++R R ++ + ++L T + +E G+ T +GD + PL L K QV Sbjct: 140 KGNVKARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDMAPLFGLSKRQVR 199 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 ++A+ + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 200 EVAATLGA--------------PEQLVKKVPTADLEELAPQKADEDALSLTYEQIDDFLE 245 >gi|288958170|ref|YP_003448511.1| N-carbamoylputrescine amidase [Azospirillum sp. B510] gi|288910478|dbj|BAI71967.1| N-carbamoylputrescine amidase [Azospirillum sp. B510] Length = 302 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 22/261 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSA-----IDT 72 D A N+A EA +G +IL ELF + Y +D K+S + A I+ Sbjct: 25 DRAANVAGVESLIREAAARGAQIILPQELFETPYFCKDQ--KQSLFDLAAPADGHPVIER 82 Query: 73 LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFIS 131 ++S + I V F + + NS+ ++DA G+++ + K ++P+ + EK F Sbjct: 83 MRSLARELSVVIPVSFFEKARNAYYNSMAMVDADGSLLGIYRKSHIPDGPGYQEKFYFSP 142 Query: 132 GYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKR 187 G S + R +G IC D W + + +GAE L ++ + P + + Sbjct: 143 GDSGIRVFKTRYATVGCAICWDQW-FPETARVMALKGAEILLYPTAIGSEPQDSSIDSQG 201 Query: 188 H--EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 H ++ G +P++ N+VG + L F G+SF Q ++ Q S Sbjct: 202 HWTRVMQGHAGANLMPLVASNRVGVEQGESCALTFYGSSFIAGPQGEIVAQADRESRTVL 261 Query: 242 MTEWHYDQ---QLSQWNYMSD 259 + D+ Q + W D Sbjct: 262 TATFELDRIAAQRASWGVFRD 282 >gi|308069006|ref|YP_003870611.1| amidohydrolase [Paenibacillus polymyxa E681] gi|305858285|gb|ADM70073.1| Predicted amidohydrolase [Paenibacillus polymyxa E681] Length = 291 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 16/262 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 ++K+K+A Q++ +I NI+KA + EA QG +IL ELF + Y + + Sbjct: 1 MRKVKVAATQMS-CSSNIEENISKAEKLVREAAAQGAQIILLQELFETPYFCQKEKSDYY 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + + A++ K + + + F + NS+ ++DA G ++ K ++ Sbjct: 60 SYATELEHNKAVNHFKKIAKELQVVLPISFYEKKNYARYNSLAVIDADGEVLGKYRKSHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R ++GI +C D W + + GAE LF + Sbjct: 120 PDGPGYEEKFYFNPGDTGFKVWNTRYAKIGIGVCWDQWY-PEAARCMALMGAELLFYPTA 178 Query: 174 LNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQQ 227 + + P K H + G + +P+I N++G + + + F G+SF Q Sbjct: 179 IGSEPQDSAIDSKDHWQTCMLGHAASNLIPVIASNRIGTETDEDSSITFYGSSFIAGHQG 238 Query: 228 QLAFQMKHFSEQNFMTEWHYDQ 249 + E+ E+ D+ Sbjct: 239 NKIAEAGRTDEEVLTAEFDLDE 260 >gi|254505991|ref|ZP_05118136.1| NAD+ synthetase [Vibrio parahaemolyticus 16] gi|219551214|gb|EED28194.1| NAD+ synthetase [Vibrio parahaemolyticus 16] Length = 275 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 53/275 (19%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------IMLPYKYTSPQ 334 ++ +Q+ +++G+SGG+DS C +A A+ + N +T + LPY Q Sbjct: 28 IKRKLQEAGCKSLVLGISGGVDSTTCGRLAQLAVNQLNEETDGGYQFIAVRLPY---GEQ 84 Query: 335 SLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQ 383 ED A A ++ K V IH N + + E+ + I V N++ Sbjct: 85 KDEDEAQLALGFIQPTHSVSVNIKQGVDGIHAATNTALE-GTGLVPEDAAKIDFVKGNVK 143 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R R ++ + ++L T + +E G+ T +GD + PL L K QV ++A+ Sbjct: 144 ARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVREVAAT 203 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIKRIVEN 499 + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 204 LGA--------------PELLVKKVPTADLEELAPQKADEDALNLTYDQIDDFLE----- 244 Query: 500 EESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 + ++E + + H+ +++KR+ P Sbjct: 245 -------GKPVSEEVTQRLVHIYKVTQHKRQPIPT 272 >gi|157691085|ref|YP_001485547.1| NAD synthetase [Bacillus pumilus SAFR-032] gi|189030327|sp|A8F9S0|NADE_BACP2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|157679843|gb|ABV60987.1| NAD(+) synthase (glutamine-hydrolyzing) [Bacillus pumilus SAFR-032] Length = 273 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 51/266 (19%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL------GKENVQTIMLPYKYTSPQSL 336 L+DY++K ++G+SGG DS L +A A GKE+ I + + Q Sbjct: 30 LKDYLKKTGAKGFVLGISGGQDSTLAGRLAQLAASELRQEGKEDAVFIAVRLPHGVQQDE 89 Query: 337 EDAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE----NIQSRIRG 388 DA + KYD+ P + S+ Q++ G +++ N+++R+R Sbjct: 90 GDAQLALSFIQPDKSWKYDIAPA-------VTAFSEQYQKDTGGPLSDFNKGNVKARMRM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A+ +++ T + +E G+ T YGD PL L K Q L + Sbjct: 143 IAQYAVGGEEGLLVIGTDHAAEAVTGFFTKYGDGGADVLPLTGLTKRQGRTLLEALQA-- 200 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 P + K P+A+L +P QTD+ L Y +DD ++ Sbjct: 201 ------------PERLYLKKPTADLLDDKPQQTDETELGITYNEIDDYLE---------- 238 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKRR 530 + +++ V +E SE+KR+ Sbjct: 239 --GKPVSEQAVEAIEKRYVQSEHKRQ 262 >gi|15600113|ref|NP_253607.1| NAD synthetase [Pseudomonas aeruginosa PAO1] gi|107104019|ref|ZP_01367937.1| hypothetical protein PaerPA_01005092 [Pseudomonas aeruginosa PACS2] gi|218894015|ref|YP_002442884.1| NAD synthetase [Pseudomonas aeruginosa LESB58] gi|254244187|ref|ZP_04937509.1| NH3-dependent NAD synthetase [Pseudomonas aeruginosa 2192] gi|25090801|sp|Q9HUP3|NADE_PSEAE RecName: Full=NH(3)-dependent NAD(+) synthetase gi|226724351|sp|B7V1Y3|NADE_PSEA8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|9951198|gb|AAG08305.1|AE004905_3 NH3-dependent NAD synthetase [Pseudomonas aeruginosa PAO1] gi|126197565|gb|EAZ61628.1| NH3-dependent NAD synthetase [Pseudomonas aeruginosa 2192] gi|218774243|emb|CAW30060.1| NH3-dependent NAD synthetase [Pseudomonas aeruginosa LESB58] Length = 275 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 39/233 (16%) Query: 271 EEEADYNACVLSLRDYVQK----NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 + EAD A + ++Q+ + +++G+SGG+DS +A A+ + QT Sbjct: 19 QSEADVQAQIARRIAFIQQCLKDSGLKTLVLGISGGVDSLTAGLLAQRAVEQLREQTGDQ 78 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF-----LQE 372 + LPY+ ++A A A + D ++ +L Q L+ Sbjct: 79 AYRFIAVRLPYQVQQ----DEADAQASLATIRADEEQTVNIGPSVKALAEQLEALEGLEP 134 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 S V NI++RIR A++ +++ T + +E +G+ T +GD + PL L Sbjct: 135 AKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGL 194 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 K QV LA + P +++EK P+A +LRP D+ S Sbjct: 195 AKHQVRALARALGA--------------PENLVEKIPTADLEDLRPGHPDEAS 233 >gi|330721662|gb|EGG99673.1| NAD synthetase [gamma proteobacterium IMCC2047] Length = 275 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 34/232 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKEN----VQTIMLPYKYTSPQS 335 ++D ++++ +++G+SGG+DS C A +A+D L E Q I + Y + Sbjct: 29 IKDQLKQSGLKHLVLGISGGVDSTTCGRLAQLAIDELNAEQRGNEYQFIAVRLPYGTQAD 88 Query: 336 LEDAAAC----AKALGCKYDVLPIHD-LVNHFFSLMSQ----FLQEEPSGIVAENIQSRI 386 +DA A + ++ P D L N S + Q E V N+++R Sbjct: 89 EDDAQTALNFIAPSSSLTVNIKPSTDSLHNEVISALEQQAPLVAHENHIDFVKGNVKARA 148 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R ++ +++ T + +E G+ T +GD + PL L K QV QLA + Sbjct: 149 RMMAQYDIAGLVHGLVIGTDHSAENITGFYTKWGDGACDLAPLFGLSKRQVRQLADHLGA 208 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 P S++ K+P+A+L P + D+ L Y +DD ++ Sbjct: 209 --------------PKSLVHKTPTADLECLDPGKADEHVLGLSYDEIDDFLE 246 >gi|300744189|ref|ZP_07073208.1| NAD+ synthetase [Rothia dentocariosa M567] gi|300379914|gb|EFJ76478.1| NAD+ synthetase [Rothia dentocariosa M567] Length = 276 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 32/226 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQ----TIMLPYKYTSPQS 335 L DY + H ++G+SGGIDS L +A + L E Q + LPYK + Sbjct: 34 LCDYAKATGTHGFVLGISGGIDSTLAGRLCQLASEKLNAEGYQAQFMAVRLPYKTQVDE- 92 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 EDA + + V I D V+ F + + + S NI++R R AL Sbjct: 93 -EDAQKALEFIAPDRTVTFNIADAVDGFDTAYTAAVGTPISDFNKGNIKARARMIAQYAL 151 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + +++ T + +E G+ T +GD PL L K Q QL Sbjct: 152 AGDPSLLVVGTDHAAESVTGFFTKFGDGGADILPLSGLNKRQ-NQL-------------- 196 Query: 455 PLTEVIPPS--ILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 L V+ S + K P+A+L P +TD++ L YP +DD ++ Sbjct: 197 -LLRVLGASERLWAKPPTADLLDGIPGRTDEDELGITYPQIDDYLE 241 >gi|289624766|ref|ZP_06457720.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650657|ref|ZP_06482000.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. aesculi str. 2250] gi|330871203|gb|EGH05912.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 264 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q +P+ DI+GN+ + + + A QG L++ E+F++GY + Sbjct: 1 MRIALYQCSPLPLDISGNLTRLEQQAQAAAEQGAQLLICPEMFLTGYNIGAQAVNELAQT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + + N+V ++D+ L NY + Sbjct: 61 QDGPAASRIAAIAQASGIAILYGYPERGPDQQIYNAVQLIDS-------QGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H ++ F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDRSMFAAGEDHYPVVELNGWRLGMLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + ++ R H ++Y N G + + + G +S C DG + L Sbjct: 173 MLPYDFVCEVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLSSLCAPDGSRPL 224 >gi|254238362|ref|ZP_04931685.1| NH3-dependent NAD synthetase [Pseudomonas aeruginosa C3719] gi|126170293|gb|EAZ55804.1| NH3-dependent NAD synthetase [Pseudomonas aeruginosa C3719] Length = 275 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 39/233 (16%) Query: 271 EEEADYNACVLSLRDYVQK----NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 + EAD A + ++Q+ + +++G+SGG+DS +A A+ + QT Sbjct: 19 QSEADVQAQIARRIAFIQQCLKDSGLKTLVLGISGGVDSLTAGLLAQRAVEQLREQTGDQ 78 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF-----LQE 372 + LPY+ ++A A A + D ++ +L Q L+ Sbjct: 79 AYRFIAVRLPYQLQQ----DEADAQASLATIRADEEQTVNIGPSVKALAEQLEALEGLEP 134 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 S V NI++RIR A++ +++ T + +E +G+ T +GD + PL L Sbjct: 135 AKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGL 194 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 K QV LA + P +++EK P+A +LRP D+ S Sbjct: 195 AKHQVRALARALGA--------------PENLVEKIPTADLEDLRPGHPDEAS 233 >gi|311112783|ref|YP_003984005.1| NAD+ synthetase [Rothia dentocariosa ATCC 17931] gi|310944277|gb|ADP40571.1| NAD+ synthetase [Rothia dentocariosa ATCC 17931] Length = 276 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 32/226 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ-------TIMLPYKYTSPQS 335 L DY + H ++G+SGGIDS L + A K N + + LPYK + Sbjct: 34 LYDYAKATGTHGFVLGISGGIDSTLAGRLCQLASEKLNAEGYRAQFMAVRLPYKTQVDE- 92 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 EDA + + V I D V+ F + + + S NI++R R AL Sbjct: 93 -EDAQKALEFIAPDRTVTFNIADAVDGFDTAYTAAVGTPISDFNKGNIKARARMIAQYAL 151 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + +++ T + +E G+ T +GD PL L K Q QL Sbjct: 152 AGDPSLLVVGTDHAAESVTGFFTKFGDGGADILPLSGLNKRQ-NQL-------------- 196 Query: 455 PLTEVIPPS--ILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 L V+ S + K P+A+L P +TD++ L YP +DD ++ Sbjct: 197 -LLRVLGASERLWAKPPTADLLDGIPGRTDEDELGITYPQIDDYLE 241 >gi|197118849|ref|YP_002139276.1| N-carbamoylputrescine amidohydrolase [Geobacter bemidjiensis Bem] gi|197088209|gb|ACH39480.1| N-carbamoylputrescine amidohydrolase [Geobacter bemidjiensis Bem] Length = 293 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 31/245 (12%) Query: 2 LKKLKIAIAQ--LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 ++KLK+A+ Q L P D +A EA QG L+L EL Y F Sbjct: 1 MQKLKVALVQQALRP---DREKMVAATSAQIREAAAQGAKLVLLQELHTGSY------FC 51 Query: 60 KSFIQACSSAIDTLKSDTHDG--------GAGIVVGFPRQDQEGVLN--SVVILDAGNII 109 ++ AC +++ + D G IV + G+ + +VVI G+I Sbjct: 52 QTEDTACFDLAESIPGPSTDHFGALARELGVVIVTSLFEKRAPGLYHNTAVVIEKDGSIA 111 Query: 110 AVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K+++P+ F+EK F G +P+ +LG+L+C D W + + GA Sbjct: 112 GKYRKMHIPDDPAFYEKFYFTPGDLGFEPVQTSVGKLGVLVCWDQW-YPEAARLMALAGA 170 Query: 169 EFLF---SLNASPYYHNKLKKRH--EIVTGQISHV---HLPIIYVNQVGGQDELIFDGAS 220 + L ++ P ++R VT Q SH +P++ VN+VG +++ GA Sbjct: 171 DLLIYPTAIGWDPRDEEAEQQRQLDAWVTIQRSHAVANGIPVVSVNRVGFEEDPSGAGAG 230 Query: 221 FCFDG 225 F G Sbjct: 231 IKFWG 235 >gi|282917260|ref|ZP_06325015.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus D139] gi|283771063|ref|ZP_06343954.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus H19] gi|282318887|gb|EFB49242.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus D139] gi|283459657|gb|EFC06748.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus H19] Length = 273 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 ++ YVQ ++F K +++G+SGG DS L + AV+ L +E + + LPY Sbjct: 31 IKSYVQSHSFIKSLVLGISGGQDSTLVGKLVQMAVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVEQALQF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|238918826|ref|YP_002932340.1| glutamine-dependent NAD+ synthetase, [Edwardsiella ictaluri 93-146] gi|238868394|gb|ACR68105.1| glutamine-dependent NAD+ synthetase, putative [Edwardsiella ictaluri 93-146] Length = 95 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 41/65 (63%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + + G D ++F+EL + GYPPEDL+++ Sbjct: 1 MSRTLSIALAQLNLLVGDIEGNAERMLATLAQQQQAGADAVMFSELALCGYPPEDLLYRD 60 Query: 61 SFIQA 65 F A Sbjct: 61 DFSSA 65 >gi|322391915|ref|ZP_08065380.1| N-carbamoylputrescine amidase [Streptococcus peroris ATCC 700780] gi|321145395|gb|EFX40791.1| N-carbamoylputrescine amidase [Streptococcus peroris ATCC 700780] Length = 291 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 27/246 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ + +A Q+ D+ NI A R +A +QG +IL ELF Y ++ + Sbjct: 1 MRNVTVAAIQMQ-CAKDVETNIQTAERLVRQAAKQGAKIILLPELFERPYFCQERQYDYY 59 Query: 61 SFIQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q+ + +AI K + + + F +D + NS+ ++DA G ++ V K ++ Sbjct: 60 QYAQSVTENTAIQHFKVIAKELKVVLPISFYEKDGNVLYNSIAVIDADGEVLGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 P+ + EK F G N D ++GI IC D W + L GAE LF Sbjct: 120 PDDHYYQEKFFFTPG--NTGFKVWDTLYAKIGIGICWDQW-FPETARCLALNGAELLFYP 176 Query: 173 -SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELIFDG 218 ++ + P + + G + +P+I N+ GGQ L F G Sbjct: 177 TAIGSEPILDTDSCGHWQRTMQGHAAANIVPVIAANRYGLEEVTPCEENGGQSSSLNFYG 236 Query: 219 ASFCFD 224 +SF D Sbjct: 237 SSFMTD 242 >gi|238917344|ref|YP_002930861.1| beta-ureidopropionase [Eubacterium eligens ATCC 27750] gi|238872704|gb|ACR72414.1| beta-ureidopropionase [Eubacterium eligens ATCC 27750] Length = 290 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 28/242 (11%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTH--- 78 NIAKA + EA G +IL ELF Y ++ + A ++ +D + H Sbjct: 20 NIAKADKMVREAAANGAQIILLPELFERQYFCQERNYD---YYAFATPVDENPAVKHFQK 76 Query: 79 ---DGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYS 134 + + + F +D N+V ++DA G+++ + K ++P+ + EK F G + Sbjct: 77 LAAELKVVLPISFYERDINVFYNTVAVIDADGSVLGIYRKTHIPDDHYYQEKFYFTPGDT 136 Query: 135 NDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYH-NKLKKRHE 189 + R R+G+ IC D W + + QGAE LF ++ + P + + Sbjct: 137 GFKVWDTRYARIGVGICWDQW-FPETARGMAVQGAEILFYPTAIGSEPILEVDSMPHWRR 195 Query: 190 IVTGQISHVHLPIIYVNQVG------------GQDELIFDGASFCFDGQQQLAFQMKHFS 237 + G + +P++ N++G + L+F G+SF D ++ Q Sbjct: 196 CMQGHSACNIVPVVAANRIGEEKVTPSEANGYQESSLLFYGSSFVTDATGEIVTQASRDK 255 Query: 238 EQ 239 E+ Sbjct: 256 EE 257 >gi|170727136|ref|YP_001761162.1| NAD synthetase [Shewanella woodyi ATCC 51908] gi|238688676|sp|B1KJ47|NADE_SHEWM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|169812483|gb|ACA87067.1| NAD+ synthetase [Shewanella woodyi ATCC 51908] Length = 276 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 54/238 (22%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQ------TIMLPYKYTSPQSLE 337 +++++ +++G+SGG+DS+L + AV+ L +E + LPY Q E Sbjct: 32 LKESHTQTLVLGISGGVDSSLAGKLCQLAVEQLNEETSSELYQFIAVRLPYHV---QKDE 88 Query: 338 DAA--ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI---------------VAE 380 D A AC K + IHD V S QE SG+ V Sbjct: 89 DEAQLACQFISPSKLVTVNIHDGV-------SGVHQETLSGLTSAGIEVCDSTKLDFVKG 141 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N+++R+R ++ + +++ T + +E G+ T +GD + PL L K QV QL Sbjct: 142 NVKARMRMIAQYEIAGLTGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRQL 201 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 A++ + P ++EK+P+A+L +P D+ +L Y +DD ++ Sbjct: 202 AAYLGA--------------PAVLVEKAPTADLEEDKPQLEDEVALGLTYEQIDDFLE 245 >gi|322710183|gb|EFZ01758.1| glutamine-dependent NAD(+) synthetase [Metarhizium anisopliae ARSEF 23] Length = 725 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 123/579 (21%), Positives = 207/579 (35%), Gaps = 120/579 (20%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A A L V D GN+A+ + + A QG L EL + GY D + Sbjct: 33 ITVAAATLTSVPLDFKGNLARILESIKLAKEQGAKLRTGPELEVPGYGCLDHHLEGDTFL 92 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++ I VG + + N V+L +I +R K++L N + Sbjct: 93 HSWEVVAQILNEPMIKDMLIDVGMGVRHRNVRYNCRVLLTYQHIYMIRPKMSLANDGLYR 152 Query: 125 EKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWKNSNI 159 E R F I+G + PI D +G CE+++ SN Sbjct: 153 EARHFTAWSKPRTTETYYLEKVVRDITGQRSVPIGDVVLSTMDTSVGCETCEELFTPSNP 212 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDELIFD 217 ++ G E + + +AS KL R ++ + +Y N G G+ ++FD Sbjct: 213 STYMGLNGVEVILNSSASHAELRKLNTRLNLIQNCTRKLGGLYVYANATGVDGEARMMFD 272 Query: 218 GASFCF-DGQ---QQLAFQMKHFS------------------EQNFMTEWHYDQQLSQWN 255 G+S +G Q F +K +N D + + Sbjct: 273 GSSMILCNGAVLGQSPQFSLKEVEVLTATIDLETIRSHRSSISRNVQGAAQPDYPRVECD 332 Query: 256 YMSDDSASTMYI----------------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 A ++I P+QE Y A + L Y+ ++N I L Sbjct: 333 LYLSRPADEVFISDTLHLSREIQLNIPDPMQE---IYMAEAVYLWQYLTRSNLGGFFIAL 389 Query: 300 SGGIDSALCAAIAVDALGKENVQTI-------------MLPYKYTSPQSLED-------- 338 SGG+DSA ++ V + K +Q++ + K P++ +D Sbjct: 390 SGGLDSA-SVSLFVYGMAKVVLQSVKSGDERTLSELRRITGEKDLVPETPQDIVSRLLHT 448 Query: 339 ---------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----GIVA 379 A A +G + + I + V+ +++ Q + EP G Sbjct: 449 CYMGTVNSGEHTRSRAKRLAARIGAFHSDVNIDETVSAHEAIIKQAMNFEPKFQVEGGSV 508 Query: 380 ENIQSRIRGNILMALSNHS-KAMLLTTSNKSEISVGYGTLYGDM--SGGFNPLKDLYKTQ 436 NIQ+R R + L+ S A L + S + + G + + SG PL + K+ Sbjct: 509 ANIQARNRMIVAYELAQLSTTARKLPRAGTSLLVLSSGNVDEALRGSGDIAPLGSISKSD 568 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 +W T + +TE LE PSAEL P Sbjct: 569 AKSFLAWCRD---TWDMPIITE-----FLEARPSAELLP 599 >gi|49083395|gb|AAT51021.1| PA4920 [synthetic construct] Length = 276 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 39/233 (16%) Query: 271 EEEADYNACVLSLRDYVQK----NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 + EAD A + ++Q+ + +++G+SGG+DS +A A+ + QT Sbjct: 19 QSEADVQAQIARRIAFIQQCLKDSGLKTLVLGISGGVDSLTAGLLAQRAVEQLREQTGDQ 78 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF-----LQE 372 + LPY+ ++A A A + D ++ +L Q L+ Sbjct: 79 AYRFIAVRLPYQVQQ----DEADAQASLATIRADEEQTVNIGPSVKALAEQLEALEGLEP 134 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 S V NI++RIR A++ +++ T + +E +G+ T +GD + PL L Sbjct: 135 AKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGL 194 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 K QV LA + P +++EK P+A +LRP D+ S Sbjct: 195 AKHQVRALARALGA--------------PENLVEKIPTADLEDLRPGHPDEAS 233 >gi|283471184|emb|CAQ50395.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 273 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 +++YVQ ++F K +++G+SGG DS L + +V+ L +E + + LPY Sbjct: 31 IKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVEQALQF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKQLYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKSVTPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|146414025|ref|XP_001482983.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC 6260] Length = 714 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 130/597 (21%), Positives = 204/597 (34%), Gaps = 141/597 (23%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ +EA + G L + EL I GY D + Sbjct: 5 VTLATCNLNQWALDFEGNRDRILQSIKEAKKNGASLRVGPELEICGYGCLDHFLENDLYD 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + G + +G P + N ++ G I+ +R K+ L N + Sbjct: 65 HCWDMYLQILGNPDTHGLLLDIGMPVMHRSIKYNCRLLSHDGKILLIRPKLYLANDGNYR 124 Query: 125 EKRTFISGYSNDPIVFRDIRL---------------GILICEDIWKN--SNICKHL-KKQ 166 E R F N P + D +L G + + + + C+ L Q Sbjct: 125 EMRYFTPW--NRPQYYEDFKLPKNARKVTGQSSVLFGDCVVDTLETTVAAETCEELFTPQ 182 Query: 167 GAEFLFSLNASPYYHN---------KLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIF 216 +L+ Y N KL R +++T +Y NQ G D L + Sbjct: 183 SPHISMALDGVEIYTNSLGLHHELRKLDTRLQLITEATKKCGGVYLYANQKGCDGDRLYY 242 Query: 217 DG-ASFCFDGQ---QQLAFQM---------------KHFSEQNFM-------TEWHYDQ- 249 DG A +G+ Q L F + + F Q T +H+ Sbjct: 243 DGCACIVVNGEMVAQALQFSLSDVEVVTATIDLDDVRSFRNQKLAAMQAVASTLYHHIDT 302 Query: 250 --QLSQWNYMSDDSASTMYIPLQ-----EEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +LS + + A T IP++ EE A AC L DY+++ + LSGG Sbjct: 303 TIELSPSANVWNGIAPTSPIPVRIHSAAEEIALGPAC--WLWDYLRRCRAAGFFLPLSGG 360 Query: 303 IDSALCAAI-------AVDALGKENVQTI-----------MLPYKYTSPQSLE------- 337 IDS A I V A+ + Q I +P +PQ L Sbjct: 361 IDSCATAVIVHLMCRLVVAAVENHDHQVISDVKSLVHDDSFVP---KTPQELADKLFHTA 417 Query: 338 ---------DAAACAKALGCKYD--------------VLPIHDLVNHFFSLMSQFLQEEP 374 D + AK L K V+ + ++ + F + Sbjct: 418 FLGTENSSGDTRSRAKELAAKIGSFHVDLNMDTAVSAVISVFEVATGRKPIFKVFGGSQT 477 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAML------------LTTSNKSEISVGYGTLYGDM 422 + +NIQ+R+R M LS +L L ++N E GY T Y Sbjct: 478 ENLALQNIQARLR----MVLSYMFAQLLPWTRLKTGGLLVLGSANVDECLRGYLTKYDCS 533 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 S NP+ + KT + + W I L+ +P+AEL P D Sbjct: 534 SADINPIGGVSKTDLKRFILWAEKE--------FDMPILKQFLDATPTAELEPITAD 582 >gi|262274004|ref|ZP_06051816.1| NAD synthetase [Grimontia hollisae CIP 101886] gi|262221814|gb|EEY73127.1| NAD synthetase [Grimontia hollisae CIP 101886] Length = 278 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 50/261 (19%) Query: 262 ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGK 318 A +P + E + V +++ +Q + +++G+SGG+DS+ C A +AV+ L + Sbjct: 7 AEMRVLPTIDPEFEVQRRVNFIKNRLQASGSKSLVLGISGGVDSSTCGRLAQLAVEQLNE 66 Query: 319 ENVQT------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL-VN--------HFF 363 E T + LPY Q ED A A + + P H + VN H Sbjct: 67 ETGSTDYQFIAVRLPYGV---QQDEDEAQLALSF-----IQPTHSVSVNIKEGVDGLHAS 118 Query: 364 SLM----SQFLQEEPSGI--VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 +L + + ++ + + V N+++R R ++ ++L T + +E G+ T Sbjct: 119 TLTALEGTDLIPKDNAKLDFVKGNVKARARMIAQYEIAGMVGGLVLGTDHSAENITGFYT 178 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELR 474 +GD + PL L K QV QLA++ + P ++ K+P+A EL Sbjct: 179 KFGDGACDLAPLFGLNKRQVRQLAAYLGA--------------PELLVVKTPTADLEELS 224 Query: 475 PHQTDQESLP-PYPILDDIIK 494 P + D+++L Y +DD ++ Sbjct: 225 PQKADEDALQLTYDEIDDFLE 245 >gi|169627918|ref|YP_001701567.1| carbon-nitrogen hydrolase family protein [Mycobacterium abscessus ATCC 19977] gi|169239885|emb|CAM60913.1| Hypothetical carbon-nitrogen hydrolase family protein [Mycobacterium abscessus] Length = 266 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 21/229 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L++A+ Q + D+ N+A+ A L++F E++++GY + + Sbjct: 1 MTGRLRLAVVQCSSQAADVQANLARLAETAHAAAAGDAQLVVFPEMYLTGYNIGEWDIRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPN 119 A+ ++ D I VG+P + +G + NS +I D R ++ L N Sbjct: 61 LAQSPDGPAMQFIRQTACDADMHICVGYPERASDGQIYNSALICDP------RGRVVL-N 113 Query: 120 YSEFH-----EKRTFISGYSNDPI-VFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF- 172 Y + H E+ F P+ V + +G+LIC D+ N+ + L A+ + Sbjct: 114 YRKSHLFGDTERNVFTRPGPQLPLAVVHGVSVGLLICYDVEFPENV-RALAMARADVVVV 172 Query: 173 -SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + N P++ +V + L + Y N G D L + G S Sbjct: 173 PTANMEPFH----AVCETVVPARAYENQLYVAYANYCGNHDGLAYCGGS 217 >gi|148546435|ref|YP_001266537.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida F1] gi|148510493|gb|ABQ77353.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida F1] Length = 298 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 24/235 (10%) Query: 2 LKKLKIAIAQLNPVVG------DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED 55 + ++IA+ Q +P VG +++ +A ARRA R+G +LI+ EL +GY Sbjct: 8 VSPVRIAVIQYDPQVGLEHCESNVSRGLALARRA----AREGANLIVLPELANTGYTFNS 63 Query: 56 LVFKKSFIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 S Q + T + GF D + +S V+ ++ Sbjct: 64 RAEAYSHAQVLQDGPCLKTWADFAKQYQVYLAAGFAECDGLKLYDSAVLFGPEGLLGHYR 123 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K +L N EK F G P+ I R+G+LIC DIW + + + QGA+ + Sbjct: 124 KAHLWN----QEKLWFTPGDLGFPVFETPIGRIGLLICWDIWF-PEVPRVMAAQGADIIC 178 Query: 173 SLN-----ASPYYHNKLKKRHEIVTGQISHV-HLPIIYVNQVGGQDELIFDGASF 221 SLN P + + + +T +HV ++ I N+VG + F G S Sbjct: 179 SLNNWVWTPPPLFDDAGRCMASYLTMTAAHVNNVYIAAANRVGSERGGRFLGCSL 233 >gi|218245846|ref|YP_002371217.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cyanothece sp. PCC 8801] gi|257058894|ref|YP_003136782.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cyanothece sp. PCC 8802] gi|218166324|gb|ACK65061.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cyanothece sp. PCC 8801] gi|256589060|gb|ACU99946.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cyanothece sp. PCC 8802] Length = 295 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 25/258 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF 58 M+K LK+A+ Q + ++ N K + ++A + LI+ EL S Y ED+ Sbjct: 1 MIKSLKVALVQ-HSNTNNLDNNFKKTIQGIQQAAAENAQLIVLQELHRSLYFCQTEDVSC 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 S+ + L + G IV + G+ N+ V+LD G I K++ Sbjct: 60 FDLAETIPGSSTELLGQLAQELGVVIVASLFEKRATGLYHNTAVVLDKDGEIAGKYRKMH 119 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ F+EK F G +PI RLG+++C D W + + +GA+ L Sbjct: 120 IPDDPGFYEKFYFTPGDLGFEPINTSIGRLGVMVCWDQWFPEG-ARLMAMKGAQMLIYPT 178 Query: 176 ASPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVG------GQDE-LIFDGAS 220 A + K+++R + Q +H +P+I N+VG Q E ++F G S Sbjct: 179 AIGWDPRDSQDEKIRQRDAWMIAQRAHAVSNGIPVISCNRVGYEADPSSQSEGIVFWGNS 238 Query: 221 FCFDGQQQLAFQMKHFSE 238 F Q ++ + H SE Sbjct: 239 FITGSQGEI---LAHASE 253 >gi|292490082|ref|YP_003532976.1| hydrolase, carbon-nitrogen family [Erwinia amylovora CFBP1430] gi|292901092|ref|YP_003540461.1| carbon-nitrogen hydrolase [Erwinia amylovora ATCC 49946] gi|291200940|emb|CBJ48077.1| putative carbon-nitrogen hydrolase [Erwinia amylovora ATCC 49946] gi|291555523|emb|CBA24063.1| hydrolase, carbon-nitrogen family [Erwinia amylovora CFBP1430] gi|312174273|emb|CBX82526.1| hydrolase, carbon-nitrogen family [Erwinia amylovora ATCC BAA-2158] Length = 286 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 9/153 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KLK+A+AQ PV GDI N+ ++ E A + G ++L E F+SGY P L+ Sbjct: 12 KLKVAVAQAEPVAGDIPANVQQSVTLIERAAKLGAKVVLLPEKFLSGYEP-SLIKADPAR 70 Query: 64 QACSSAIDTLKS---DTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPN 119 A S+ + LK V+G Q++ GV + S+ G + A K L + Sbjct: 71 YAVSTTDERLKPIAMACRQAAIFAVIGAATQEETGVCITSLCFNPQGELFARYHKRALFS 130 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 E R F G I LG+ IC D Sbjct: 131 ----SEARFFQPGQQAVAIEVEGWSLGMAICYD 159 >gi|66047892|ref|YP_237733.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae pv. syringae B728a] gi|63258599|gb|AAY39695.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae pv. syringae B728a] Length = 264 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ D++GN+ + + + A +QG +++ E+F+SGY + Sbjct: 1 MRVALYQCPPLPLDVSGNLTRLEQQAQAAAKQGAQVLICPEMFLSGYNIGAQAVGELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P + +G + N+V ++D+ L NY + Sbjct: 61 QDGPAATRIAAIAQASGIAILYGYPERAGDGQIYNAVQLIDS-------QGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H +K F++G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDKSMFVAGDDHYPVVELNGWRLGLLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + + R H ++Y N G + + + G +S C DG + L Sbjct: 173 MLPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLSSICAPDGSRPL 224 >gi|315181833|gb|ADT88746.1| NH(3)-dependent NAD(+) synthetase [Vibrio furnissii NCTC 11218] Length = 276 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKEN------VQTIMLPYKYTSPQSLEDAAACA-- 343 +++G+SGGIDS C A +AVDAL +E+ + LPY Q ED A A Sbjct: 40 LVLGISGGIDSTTCGRLAQLAVDALNQEHGTDQYKFVAVRLPY---GAQKDEDEAQQALT 96 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H +H + + E + I V N+++R R + Sbjct: 97 FIQPTFSVSVNIKAGVDGLH-AASHEALAGTGLIPSEAAKIDFVKGNVKARARMVAQYEI 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV Q+A+ + Sbjct: 156 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVRQVAAALGA-------- 207 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+++L Y +DD ++ Sbjct: 208 ------PELLVHKTPTADLEELAPQKADEDALNLTYEQIDDFLE 245 >gi|154684805|ref|YP_001419966.1| NAD synthetase [Bacillus amyloliquefaciens FZB42] gi|189030324|sp|A7Z159|NADE_BACA2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|154350656|gb|ABS72735.1| NadE [Bacillus amyloliquefaciens FZB42] Length = 272 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 37/262 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSLE 337 L+ Y++K ++G+SGG DS L A +A +++ +E N + I + + + Q + Sbjct: 30 LKQYLKKTGAKGFVLGISGGQDSTLAGRLAQLAAESIREEGGNAEFIAVRLPHGTQQDED 89 Query: 338 DAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DA K + K I V+ F + ++ S N+++R+R A+ Sbjct: 90 DAQMALKFIKPDKSWTFDIKSAVSAFTDQYKKDTGDQLSDFNKGNVKARMRMIAQYAIGG 149 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++ T + +E G+ T YGD PL L K R + LG Sbjct: 150 QEGLLVIGTDHAAEAVTGFFTKYGDGGADLLPLTGLTK---------RQGRRLLEELGA- 199 Query: 457 TEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYND 512 P + K P+A+L +P QTD+ L Y +DD ++ ++ + Sbjct: 200 ----PERLYLKLPTADLLDEKPQQTDETELGITYNDIDDYLE------------GKDVSS 243 Query: 513 ETVRYVEHLLYGSEYKRRQAPV 534 E + +E +E+K RQ P Sbjct: 244 EVIEALEKRYLSTEHK-RQVPA 264 >gi|37521251|ref|NP_924628.1| hydratase [Gloeobacter violaceus PCC 7421] gi|35212247|dbj|BAC89623.1| glr1682 [Gloeobacter violaceus PCC 7421] Length = 284 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 22/235 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 + L +A Q V D+A N+ + EA +G +IL +ELF S Y D F Sbjct: 1 MSALTVAALQ-TAFVEDVATNVERVSALVREAAERGAQIILPSELFESHYFCRVERDQFF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + I ++ + G I V F + + NS+ I+DA G + K ++ Sbjct: 60 DLARPAEGHPTIAHFQAIAAELGVVIPVSFFERAGQSHYNSIAIVDADGRCLGTYRKSHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIR-----LGILICEDIWKNSNICKHLKKQGAEFLF 172 P+ + EK F G + FR R +G+ IC D W + + GAE LF Sbjct: 120 PDGPGYEEKFYFRPGNTG----FRVWRTRYATIGVGICWDQW-FPEAARAMVLMGAEVLF 174 Query: 173 SLNA------SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 A SP K + +V +S+V +P++ N+ G + F G SF Sbjct: 175 YPTAIGSEPESPDLDTKDPWQRAMVGHAVSNV-IPVVAANRTGTEGNQTFYGHSF 228 >gi|313109917|ref|ZP_07795846.1| NAD synthase [Pseudomonas aeruginosa 39016] gi|310882348|gb|EFQ40942.1| NAD synthase [Pseudomonas aeruginosa 39016] Length = 275 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 39/236 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQK----NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 P + EAD A + ++Q+ + +++G+SGG+DS +A A+ + QT Sbjct: 16 PPFQSEADVQAEIARRIAFIQQCLKDSGLKTLVLGISGGVDSLTAGLLAQRAVEQLREQT 75 Query: 324 ---------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF----- 369 + LPY+ ++A A A + D ++ +L Q Sbjct: 76 GDQAYRFIAVRLPYQVQQ----DEADAQASLATIRADEEQTVNIGPSVKALAEQLEALEG 131 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 L+ S V NI++RIR A++ +++ T + +E +G+ T +GD + PL Sbjct: 132 LEPAKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPL 191 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 L K QV LA + P +++EK P+A +LRP D+ S Sbjct: 192 SGLAKHQVRALARALGA--------------PENLVEKIPTADLEDLRPGHPDEAS 233 >gi|213406103|ref|XP_002173823.1| glutamine-dependent NAD(+) synthetase [Schizosaccharomyces japonicus yFS275] gi|212001870|gb|EEB07530.1| glutamine-dependent NAD(+) synthetase [Schizosaccharomyces japonicus yFS275] Length = 696 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 120/581 (20%), Positives = 198/581 (34%), Gaps = 126/581 (21%) Query: 11 QLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFI--SGYPPEDLVFKKSFIQACSS 68 QLN D GN + ++ A QG L + EL + SGY ED + Sbjct: 4 QLNQWAMDFEGNCDRILKSIIVAKAQGAALRVGPELEVTKSGYGCEDHFLESDTFLHSME 63 Query: 69 AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRT 128 + + DT + +G P + N V+ G I+ +R K+ L + F E R Sbjct: 64 ILTKIIRDTRVQDILLDIGVPVMHKSARYNCRVVALNGKILLIRPKLWLCDDGNFRESRW 123 Query: 129 FISG-------------------------YSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 F + + I +D +GI CE+++ + + Sbjct: 124 FTPWLQPRKVETHYLPSAIAKELNQESVPFGDAIIGCKDTVIGIETCEELFTPQSPHIDM 183 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD-ELIFDGASFC 222 G E + + S + KL R ++ +Y NQ G L +DG++ Sbjct: 184 SLNGVEIFINASGSHHELRKLNTRVRLIQNATMKCGGVYLYSNQRGCDGGRLYYDGSAMI 243 Query: 223 FDGQQQLA----FQM------------------KHFSEQNFMTEWHYDQQLSQWNYMSDD 260 F + L F + ++ + +H Q Q +Y D Sbjct: 244 FANGELLGQGSQFSLHDVEVVTATVDMDIVRSYRYLPSHGLQSRFHEGYQRIQIDYSLCD 303 Query: 261 SAS------------TMYIPLQEEEADYN-ACVLSLRDYVQKNNFHKVIIGLSGGIDSA- 306 + +++ EEE + AC L DY++++ + LSGG+DS Sbjct: 304 RGNDYNPHWKPTFPIELHLHTPEEEIAFGPACWLW--DYLRRSGAAGYFLPLSGGLDSCS 361 Query: 307 -----------LCAAIA---------VDALGKEN--------------VQTIMLPYKYTS 332 +C A+ V L K+ T + +++S Sbjct: 362 TAVIVHSMCRIVCEAVKNNDDHVLSDVRRLVKDEKYTPKDPKDLANHLFYTTFMGTEHSS 421 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SGIVAENI 382 ++ A A +G + + I +VN L P + +NI Sbjct: 422 KETRSRAKRLADIIGSYHVDMSIDTVVNSVVKLFILVTNRTPRFRSQGGSNAENLALQNI 481 Query: 383 QSRIR---GNILMAL-----SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 Q+R R G +L L ++L +SN E GY T Y S NP+ + K Sbjct: 482 QARSRMLIGYLLAQLLPWVRGKAGSLLVLGSSNVDECLRGYLTKYDCSSADINPIGGISK 541 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 L S+ S L L E L+ +P+AEL P Sbjct: 542 ---LDLKSFLASAKQQFDLPILQE-----FLDATPTAELEP 574 >gi|28493372|ref|NP_787533.1| NAD synthetase [Tropheryma whipplei str. Twist] gi|28476413|gb|AAO44502.1| NH(3)-dependent NAD(+) synthetase [Tropheryma whipplei str. Twist] Length = 291 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 128/295 (43%), Gaps = 38/295 (12%) Query: 251 LSQWNYMSDDSASTMYI-PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC- 308 LS +++ D + T+ + P + E + + V L DY++ + ++G+SGG DSAL Sbjct: 15 LSSGSFVCCDISKTLCVKPFIDPEEEISHRVSFLADYLRHSRASGYVLGISGGQDSALAG 74 Query: 309 --AAIAVDALGK----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNH 361 IAV+++ + I LPY +S DA + + ++ I ++ Sbjct: 75 RLCQIAVESVRSIGFDATLWAIRLPYGQQFDES--DAQTAMQFISPDEELSFDIRSATDN 132 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 +++ L + S NI++R+R + A++ H A+++ T + +E G+ T +GD Sbjct: 133 LCVDLNRSLGSKISDFNRGNIKARLRMVVQYAVAAHHDALVVGTDHAAEAVTGFFTKFGD 192 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 + PL L K Q + LG SI+EK P+A+L Sbjct: 193 GAADILPLYGLTKGQ---------GRALLKALGACD-----SIIEKVPTADL-------- 230 Query: 482 SLPPYPILDDIIKRIVE--NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 L P L D + ++ + ++F+ D T+ E Y S +R P+ Sbjct: 231 -LDDLPCLPDETELGLQYRDIDAFLEGKPVSEDITMAITER--YKSTLHKRMPPI 282 >gi|229157618|ref|ZP_04285694.1| Carbon-nitrogen hydrolase [Bacillus cereus ATCC 4342] gi|228625896|gb|EEK82647.1| Carbon-nitrogen hydrolase [Bacillus cereus ATCC 4342] Length = 280 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 13/234 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGLETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +L ++ + ++ N+ G F G S D ++ + Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVDPWGEIVVE 244 >gi|313668508|ref|YP_004048792.1| NH(3)-dependent NAD synthetase [Neisseria lactamica ST-640] gi|313005970|emb|CBN87427.1| NH(3)-dependent NAD synthetase [Neisseria lactamica 020-06] Length = 273 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 24 LDEYAAQANVKGFVVGVSGGIDSAVVSALAA----RTGRTTLLLDMPIR-QHPDQLERAR 78 Query: 341 ACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 79 LHIRNLQGQYANVSAQTVDLTDTFQTFEQTVGVHQTAFDNQPLSLA--NARSRLRMLTLY 136 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 137 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|294669343|ref|ZP_06734422.1| NAD+ synthetase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308753|gb|EFE49996.1| NAD+ synthetase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 263 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 18/173 (10%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ----- 334 V L DY + I+G+SGGIDSA+ +A+A A +V + +P + + Q Sbjct: 11 VRWLHDYAGQARVKGFIVGISGGIDSAVVSALA--ARTGLDVLLLEMPIRQQAEQIDRAQ 68 Query: 335 ----SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGN 389 L+ A ++L + D+ P N F + E P+ +A N ++R+R Sbjct: 69 QHIADLQSRFANVRSL--RVDLTPAF---NCFADTVDVNEAEYPAKQLALANSRARLRML 123 Query: 390 ILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 L + ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 124 TLYYYGQINGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 176 >gi|254573068|ref|XP_002493643.1| Glutamine-dependent NAD(+) synthetase [Pichia pastoris GS115] gi|238033442|emb|CAY71464.1| Glutamine-dependent NAD(+) synthetase [Pichia pastoris GS115] gi|328354530|emb|CCA40927.1| NAD+ synthase (glutamine-hydrolysing) [Pichia pastoris CBS 7435] Length = 712 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 130/593 (21%), Positives = 213/593 (35%), Gaps = 137/593 (23%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK-SFI 63 + +A LN D GN + ++ +EA L + EL ISGY D + +++ Sbjct: 5 ITLATCSLNQWALDFEGNRDRILQSIKEAKEAKASLRVGPELEISGYGCLDHFLENDTYL 64 Query: 64 QACSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + L+++ TH G + +G P + N ++ G I+ +R KI L N Sbjct: 65 HSWEMYASILQNESTH--GILLDIGLPIMHKNRRYNCRILSYDGKILLIRPKIFLANDGN 122 Query: 123 FHEKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNS 157 + E R F I+G + + I D +G CE+++ Sbjct: 123 YREMRYFTPWLQPQYVEEFVLPRLLQKITGQITVQFGDAVISTLDTCIGAETCEELFTPQ 182 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIF 216 + G E + + + S + KL R +++T + +Y NQ G D L + Sbjct: 183 APHIAMALDGVEIVANSSGSHHELRKLNTRMDLITEATTKCGGIYLYSNQKGCDGDRLYY 242 Query: 217 DGASFCFDGQQQLA----FQMKHF-------------SEQNFMTEWHYDQQLSQWNY--- 256 DG + + LA F +K S +N ++ H Q S Y Sbjct: 243 DGCALIVVNGKVLAQGSQFSLKDVEVITATVDLEDVRSYRNMIS--HGLQSRSTPVYERV 300 Query: 257 -----MSDDSAS--TMYIPLQEEEADYN----------ACVLSLRDYVQKNNFHKVIIGL 299 +S DS S +P E Y+ AC L DYV++ + L Sbjct: 301 HAAIELSPDSKSFDPTIVPTSPREIRYHLPEEEIAFGPACW--LWDYVRRCKGSGYFVPL 358 Query: 300 SGGIDS--------ALCAAIAVDAL-GKENV------------------------QTIML 326 SGGIDS ++C + +AL G E V + Sbjct: 359 SGGIDSCATSVIVFSMCTLVVKEALEGNEQVIRDAQLVANMPEGWIPETPQELCNKIFHT 418 Query: 327 PYKYTSPQSLEDAAAC---AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--------- 374 Y T+ S+E A A +G + L + +V SL +P Sbjct: 419 CYMGTTNSSIETRARSRDLAARIGSYHVDLNMDSVVTALVSLFEVVTGRKPVFKVFGGSQ 478 Query: 375 -SGIVAENIQSRIRGNILMAL-----------SNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + +NIQ+R+R +L L +N ++L ++N E GY T Y Sbjct: 479 IENLALQNIQARLR-MVLAYLFAQLLPWTRGRTNTGGLLVLGSANVDEQLRGYLTKYDCS 537 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 S NP+ + KT + I + I ++ +P+AEL P Sbjct: 538 SADVNPIGGISKTDLISF--------IKFSINRFDLPILRDFVDATPTAELEP 582 >gi|148549949|ref|YP_001270051.1| NAD synthetase [Pseudomonas putida F1] gi|189083400|sp|A5W9Q7|NADE_PSEP1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|148514007|gb|ABQ80867.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas putida F1] Length = 275 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 31/225 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 EA+ V ++D + +++G+SGG+DS A +A A+ + +T Sbjct: 25 EAEVARRVAFIKDCLANARLKTLVLGISGGVDSLTAALLAQRAINELRAETGDKAYTFIA 84 Query: 324 IMLPYKYTSPQSLEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAE 380 + LPY+ + DA AC + + + I V + ++ P+ + V Sbjct: 85 VRLPYQVQHDE--HDAQACLDVIKADEVHTVDIAPAVRALAAEVAALKNGSPTLVDFVVG 142 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N+++R R ++ +++ T + +E +G+ T +GD + PL L K QV + Sbjct: 143 NVKARTRMVAQYTIAGARAGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAI 202 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 A S G P S++EK P+A +L P + D+ S Sbjct: 203 A---RSFG-----------APESLVEKVPTADLEDLEPGKPDEAS 233 >gi|315222018|ref|ZP_07863929.1| NAD+ synthetase [Streptococcus anginosus F0211] gi|315188984|gb|EFU22688.1| NAD+ synthetase [Streptococcus anginosus F0211] Length = 274 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 42/276 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + + + + L+DY++K++F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDPQEEIRKSIDFLKDYLKKHSFLKTYVLGISGGQDSTLAGRLAQLAIEEMRAETGDA 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + LPY Q+ ED A A A + DV + ++ ++ E Sbjct: 75 SYQFIAVRLPY---GVQADEDDAQRALAF-IQPDVSLVVNIKESADAMTKAV--EATGAT 128 Query: 378 VAE----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 V++ NI++R R AL+ K ++ T + +E G+ T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYKGAVVGTDHAAENVTGFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDII 493 K Q QL + LG P++ EK P+A+L +E P I D++ Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADL------EEEKP--GIADEVA 226 Query: 494 KRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 + NE + +D+T +E + E+KR Sbjct: 227 LGVTYNEIDDYLEGKTISDQTKARIESWWHKGEHKR 262 >gi|254672140|emb|CBA04914.1| NH(3)-dependent NAD+ synthetase [Neisseria meningitidis alpha275] Length = 263 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 14 LDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRTTLLLDMPIR-QHPDQLERAR 68 Query: 341 ACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 69 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGVHQTAFDNQPLSLA--NARSRLRMLTLY 126 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 127 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 176 >gi|78224719|ref|YP_386466.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter metallireducens GS-15] gi|78195974|gb|ABB33741.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter metallireducens GS-15] Length = 259 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 14/224 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +K Q VGD+ N+ A QG L + E++ +GY +L Sbjct: 1 MTRTVKAGAVQFTIKVGDVDVNMRYVEGALRRLAAQGCALAVLPEMWDTGYAYREL---N 57 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L + + G IV P E V N+ +LD G ++ KI+L + Sbjct: 58 ELAKRTPEVVTELGRLSRELGMVIVGSMPEPHGEKVCNTAYVLDRGELVGSYRKIHL--F 115 Query: 121 SEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 S E R+ G D + D R+G+ IC D+ + + + L +GAE L Sbjct: 116 SLMGEDRSLDGG---DRWLVVDTSVGRIGVFICYDL-RFPELTRRLAVEGAEILVVPAEW 171 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 P ++ K ++ + L ++ N G Q +L F G+S Sbjct: 172 PKPRDEHWK--ALLKARAIENQLFVVAANCCGIQGKLDFFGSSL 213 >gi|228916676|ref|ZP_04080241.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228935355|ref|ZP_04098175.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824283|gb|EEM70095.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228842863|gb|EEM87946.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 280 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGLETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|225388536|ref|ZP_03758260.1| hypothetical protein CLOSTASPAR_02272 [Clostridium asparagiforme DSM 15981] gi|225045381|gb|EEG55627.1| hypothetical protein CLOSTASPAR_02272 [Clostridium asparagiforme DSM 15981] Length = 279 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 26/247 (10%) Query: 312 AVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A D LG +E + + +P T+ ++ +A K +G + I V F + Q Sbjct: 3 AFDMLGLPREQICCVTMPCFGTTDRTYSNACTMTKRVGASLREINIRRSVTSHFEDIGQD 62 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 L E + EN Q+R R ILM ++N M++ T + SE+++G+ T GD + Sbjct: 63 L--ENHDVTYENGQARERTQILMDVANQVGGMVVGTGDMSELALGWATYNGDHMSMYGVN 120 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESL 483 + KT V L + + T G L +V+ +L+ S EL P Q ++ + Sbjct: 121 ASVPKTLVRHLVRY---YADTCGEKELADVL-YDVLDTPVSPELLPPKDGEIAQKTEDLV 176 Query: 484 PPYPILDDIIKRIVE--------NEESFINNDQEYNDETV----RYVEHLLYGSEYKRRQ 531 PY + D + I+ + I + +Y + V R + ++KR Sbjct: 177 GPYELHDFFLYYILRYGYAPSKIYRLALIAFEGQYEADVVYKWLRVFYRRFFSQQFKRSC 236 Query: 532 APVGTKI 538 P G K+ Sbjct: 237 LPDGPKV 243 >gi|154150155|ref|YP_001403773.1| peptidyl-arginine deiminase [Candidatus Methanoregula boonei 6A8] gi|153998707|gb|ABS55130.1| Porphyromonas-type peptidyl-arginine deiminase [Methanoregula boonei 6A8] Length = 640 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 29/238 (12%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA+ Q+ + D N+ +AR E+A + G I ELF + Y P+ + + +Q+ Sbjct: 8 IALIQME-IGPDPDRNLNEARERVEKAAQNGAQFICLPELFRTRYFPQQI---GTPVQSL 63 Query: 67 SSAIDTLKSDTHDGGAG------IVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 + I +D A IV F R + N+ V++DA G++ A K+++P Sbjct: 64 AETIPGESTDVFTRIAKEYKAVIIVPVFERSPLGHLENAAVVIDADGSLHAPYYKVHIPQ 123 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW-KNSNICKHLKKQGAEFLFSLNA-- 176 +F EK F G R ++ +LIC D W + C L +GAE +F A Sbjct: 124 DPKFFEKGYFYPGNHYAVHATRYGKIAVLICYDQWFPEAARCVSL--EGAEIIFYPTAIG 181 Query: 177 SPYYHNK----LKKRHEIVTGQISH-----VHLPIIYVNQVGGQDELIFDGASFCFDG 225 +P ++ EI+ Q SH VH I VN+ GG+ + F G SF D Sbjct: 182 NPCTEQPSEGDWQEAWEII--QRSHAIANSVH--IAAVNRAGGEGNIRFFGGSFICDA 235 >gi|14521598|ref|NP_127074.1| hydrolase related [Pyrococcus abyssi GE5] gi|5458817|emb|CAB50304.1| Beta ureidopropionase (beta-alanine synthase) (EC 3.5.1.6) [Pyrococcus abyssi GE5] Length = 262 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 14/173 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLVFKKSF 62 +K+A Q+NP + + N +KA + +EA++QG L++ ELF +GY E + VF+ + Sbjct: 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQ 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 L D G IV G +D + + NS V++ I KI+L Sbjct: 62 KIPEGETTTFLMDVARDTGVYIVAGTAEKDGDVLYNSAVVVGPRGFIGKYRKIHL----- 116 Query: 123 FHEKRTFIS----GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+ ++ F G+ + F +++G++IC D W + L +GA+ + Sbjct: 117 FYREKFFFEPGDLGFRVFDLGF--MKVGVMICFD-WFFPESARTLALKGADVI 166 >gi|255720454|ref|XP_002556507.1| KLTH0H15004p [Lachancea thermotolerans] gi|238942473|emb|CAR30645.1| KLTH0H15004p [Lachancea thermotolerans] Length = 714 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 121/594 (20%), Positives = 201/594 (33%), Gaps = 129/594 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + A +G L + EL +SGY D + Sbjct: 5 VTVATCNLNQWALDFEGNRDRILESIRIAKERGARLRVGPELEVSGYGCLDHFLENDLYL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + G + +G P + N ++ G I+ +R KI L N + Sbjct: 65 HCWEMYAQIIKREDTRGILLDIGMPVLHKNVRYNCRLLSFDGRILFIRPKIWLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSNDPI---VFR--DIRLGILICEDIWKNSNI 159 E R F I+G P V R D +G CE+++ + Sbjct: 125 EMRFFTPWMKATQVEEFLLPPLIQKITGQRIVPFGDAVIRTLDTCIGAETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + + S + KL +R E++T +Y NQ G D L +DG Sbjct: 185 HIAMSLDGVEIITNSSGSHHELRKLNRRLELITSATRRCGGVYLYANQRGCDGDRLYYDG 244 Query: 219 ASF-CFDGQ---QQLAFQMKHFSEQNFMTEW-----HYDQQLSQWNYMSDDSASTMYIPL 269 + +G+ Q F +K + H +S+ ++ I L Sbjct: 245 CALIAVNGKIVAQGSQFSLKDVEVVTAAVDLEEVRNHRASIISRGLQAAESKVVFQRIDL 304 Query: 270 QEEEADYN----------------------------ACVLSLRDYVQKNNFHKVIIGLSG 301 +EE A AC L DY+++ N + LSG Sbjct: 305 EEELAPMGNRFNPKISPAKAREFHYHTPEEEIALGPACWLW--DYLRRCNGTGFFLPLSG 362 Query: 302 GIDSALCAAI-------AVDALGKENVQTIMLPYKYTS------PQSLEDAAAC------ 342 GIDS A I V + N Q + K P + +D A+C Sbjct: 363 GIDSCATAVIVHSMCRLVVQECKEGNEQVLADARKLARKDPEWVPATPQDLASCLFHTCF 422 Query: 343 -----------------AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 AK + + + ++V+ SL ++P Sbjct: 423 MGTTNSSKDTRSRARELAKVISSYHVDFNMDNVVSSVVSLFEITTGKKPIYKIFGGSQVE 482 Query: 376 GIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +NIQ+R+R + + + N ++L ++N E GY T Y S Sbjct: 483 NLALQNIQARLRMVLAYLFAQLLPWVRRIPNGGSLLVLGSANVDECLRGYLTKYDCSSAD 542 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + S+ + I + +P+AEL P D Sbjct: 543 INPIGGISKTDLKKFISYASK--------AFDMPILDEFVSATPTAELEPTTKD 588 >gi|253559423|gb|ACT32387.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas fluorescens] Length = 264 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 27/227 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-PEDLVFKKSFI 63 +++A+ Q P+ D AGN+ + + EA +G D+++ E+F++GY D V + + Sbjct: 1 MRVALYQCPPLPLDPAGNLQRLHQVALEA--RGADVLVLPEMFMTGYNIGVDAVNVLAEV 58 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSE 122 A + G IV G+P + ++G + N+V ++DA L NY + Sbjct: 59 YNGEWA-QQIARIAKAAGLAIVYGYPERGEDGQIYNAVQLIDA-------QGERLANYRK 110 Query: 123 FH-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SL 174 H + F +G S PIV +LG+LIC D+ N + L GAE + + Sbjct: 111 SHLFGDLDHAMFSAGDSALPIVELNGWKLGLLICYDLEFPEN-ARRLALAGAELILVPTA 169 Query: 175 NASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 N PY + + R + Q + Y N G + EL + G S Sbjct: 170 NMQPYDFIADVTVRARAIENQCF-----VAYANYCGHEGELQYCGQS 211 >gi|319410627|emb|CBY90996.1| NH(3)-dependent NAD(+) synthetase [Neisseria meningitidis WUE 2594] Length = 263 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 18/174 (10%) Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSL 336 V L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P L Sbjct: 10 IVRWLDEYAARANAKGFVVGVSGGIDSAVVSALA----ARTGRTTLLLDMPIR-QHPDQL 64 Query: 337 EDAAACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAENIQSRIRG 388 E A + L +Y + DL + F + +P + N +SR+R Sbjct: 65 ERARLHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGVHQTAFDNQPLSLA--NARSRLRM 122 Query: 389 NILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 L ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 123 LTLYYYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 176 >gi|303235585|ref|ZP_07322192.1| putative N-carbamoylputrescine amidase [Prevotella disiens FB035-09AN] gi|302484032|gb|EFL47020.1| putative N-carbamoylputrescine amidase [Prevotella disiens FB035-09AN] Length = 294 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 24/275 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 +K+LKI + QL+ D NI + ++G +L++ EL S Y ED+ Sbjct: 1 MKELKIGMLQLHNTA-DTQKNIENLTEGIRDLAKRGAELVVLQELHNSLYFCQVEDVNNF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINL 117 + + + + +V + G+ N+ V+ + IA + K+++ Sbjct: 60 DLAEPIPGPSTEHFGALAKENNIVLVTSLFEKRAAGLYHNTAVVFEKDGTIAGKYRKMHI 119 Query: 118 PNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ ++EK F G +PI RLG+LIC D W + + +GA+ L A Sbjct: 120 PDDPAYYEKFYFTPGDLGFEPINTSVGRLGVLICWDQWY-PEAARLMALKGADMLIYPTA 178 Query: 177 SPYYHNKLKKRHE--------IVTGQISHVHLPIIYVNQVGGQDE-------LIFDGASF 221 Y + ++ E ++ G LP+I VN+VG +D+ + F G+SF Sbjct: 179 IGYESSDTEEEKERQRTAWTTVMRGHAVANGLPVIAVNRVGHEDDPSGQTKGINFWGSSF 238 Query: 222 CFDGQQQLAFQMKHFSEQNFMTE--WHYDQQLSQW 254 Q +L +Q + E++ + E H + + +W Sbjct: 239 IAGPQGELHYQACNDDEESLIVEIDLHRSENVRRW 273 >gi|260591468|ref|ZP_05856926.1| N-carbamoylputrescine amidase [Prevotella veroralis F0319] gi|260536499|gb|EEX19116.1| N-carbamoylputrescine amidase [Prevotella veroralis F0319] Length = 294 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 33/285 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAK-ARRAREEANRQGMDLILFTELFISGY--PPEDLV- 57 +++LKI I Q + V D+ NI + A R + A R G +L++ EL S Y ED+ Sbjct: 1 MRELKIGIVQQHNV-ADMKNNIERLAERITDLAQR-GAELVVLQELHNSLYFCQTEDVNN 58 Query: 58 --FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRD 113 ++ + L D G IV + G+ + +VVI G I Sbjct: 59 FDLAETIPGPSTGFYGELARDL---GIVIVTSLFEKRAAGLYHNTAVVIEKDGTIAGKYR 115 Query: 114 KINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 K+++P+ ++EK F G PI RLG+L+C D W + + QGAE L Sbjct: 116 KMHIPDDPAYYEKFYFTPGDLGFHPIDTSVGRLGVLVCWDQWY-PEAARLMALQGAELLI 174 Query: 173 SLNASPYYHNKLKKRHE--------IVTGQISHVHLPIIYVNQVGGQDE-------LIFD 217 A Y + ++ + ++ G LP++ VN+VG + + + F Sbjct: 175 YPTAIGYESSDTEEEQQRQREAWTTVMRGHAVANGLPVVAVNRVGHEADPSQQTGGIQFW 234 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSD 259 G+SF Q +L ++ E++ + H +Q W ++ D Sbjct: 235 GSSFVAGSQGELLYRANDNEEESVILNIDLDHSEQVRRWWPFLRD 279 >gi|322418448|ref|YP_004197671.1| NAD+ synthetase [Geobacter sp. M18] gi|320124835|gb|ADW12395.1| NAD+ synthetase [Geobacter sp. M18] Length = 329 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 49/199 (24%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC----- 348 ++++ LSGGIDS++ AA++V ALG V + +P ++++ ++L + A +LG Sbjct: 39 RIVVALSGGIDSSVTAALSVRALGSSRVIGLEMPERHSARETLALSGKVAGSLGIETRVE 98 Query: 349 -------------KYD-----VLPIHD----------------LVNHFF----------S 364 KYD V+P + F+ S Sbjct: 99 DISGVLQSVGFYEKYDNAVRSVVPAYGEGWTSKIVISGGADKPRFTSFYLVTRDADAVQS 158 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + LQ + A N + RIR + ++ + T N+ E G+ GD + Sbjct: 159 TVRLPLQPYLEIVAATNFKQRIRKMLEYYYADRLNFAVAGTPNRLEYDQGFFVKLGDGAA 218 Query: 425 GFNPLKDLYKTQVFQLASW 443 P+ LYK+QV+QLA + Sbjct: 219 DIKPIAHLYKSQVYQLAEF 237 >gi|229192247|ref|ZP_04319212.1| Carbon-nitrogen hydrolase [Bacillus cereus ATCC 10876] gi|228591197|gb|EEK49051.1| Carbon-nitrogen hydrolase [Bacillus cereus ATCC 10876] Length = 259 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + K Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADKDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ + LK + G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LE----TKENLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVSNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIID 215 >gi|221197993|ref|ZP_03571039.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans CGD2M] gi|221204449|ref|ZP_03577466.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans CGD2] gi|221175306|gb|EEE07736.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans CGD2] gi|221181925|gb|EEE14326.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans CGD2M] Length = 281 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 21/279 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKKSFI 63 +++ +AQL+ + GD+A N K A + G LI+F E +SG+P + V Sbjct: 1 MQVELAQLSLIDGDVAHNTHKVIDAIARVDVAGGTKLIVFPETTLSGFPTRENV--ADVA 58 Query: 64 QACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 Q A+ ++ G + VG +D + N+ V++D IA+R Y + Sbjct: 59 QPLEGRALSAVRDAARQKGVAVAVGLAERDGDRFYNTTVLVDEQGDIALR-------YRK 111 Query: 123 FH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 H + F G + + +G+LIC DI + + + A+ L N + Sbjct: 112 THLWASDVGVFAPGDRFATCRWNGLTVGVLICYDI-EFPETARAIGSLDADLLIVTNGNM 170 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFD--GQQQLAFQMKH 235 + +R + + + + VN+ G G D+L F G S D G L + Sbjct: 171 DPFGPVHRRA--IAARAMENQMFALMVNRCGTGDDDLTFAGLSALVDPFGDTVLELGREE 228 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEA 274 + + + +NY+ D +P+++ + Sbjct: 229 AITRTRIDPTRLEASREHYNYLHDARVPLGLVPIEQPDG 267 >gi|148547876|ref|YP_001267978.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida F1] gi|148511934|gb|ABQ78794.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida F1] Length = 247 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 19/239 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ QL + GD+ GN+ + E+A G +L++F EL ++GY P V ++S + Sbjct: 1 MKLCAVQLASLKGDLPGNLQRHLVCIEQAAALGAELVVFPELSLTGYEPS--VARQSALP 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL--DAGNIIAVRDKIN---LPN 119 S+ +D L++ G + G P +G+ + + DA + +++ LP Sbjct: 59 VTSARLDPLQAACDRLGITVAAGLPLPTPDGIRIGMPVFCPDAPRQAYAKQRLHDDELPY 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 ++ H+ G + R+ IC + ++ ++ +L S+ + Sbjct: 119 FTPGHQALLLEVG---------EHRVAPAICYESMFMAHAAVARERGADLYLVSVAKT-- 167 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 +++ + + +P++ N VG D I G S +D Q L + SE Sbjct: 168 -AKGIREGYAHYPEVARELGMPVLMANCVGPADTFIGAGGSAAWDSQGHLLASLDDHSE 225 >gi|328765679|gb|EGF75828.1| hypothetical protein BATDEDRAFT_31001 [Batrachochytrium dendrobatidis JAM81] Length = 608 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 115/543 (21%), Positives = 194/543 (35%), Gaps = 100/543 (18%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN D +GN + + + ++A G L EL I GY D + Sbjct: 1 MPAYITLATCSLNQWALDFSGNYTRIQESIDQAKAAGACYRLGPELEIPGYGCNDHFLEA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPN 119 Q + L + + G VG P Q G+L N VI I+ +R K+ + + Sbjct: 61 DTHQHSWEVLAKLLENPQNVGITCDVGMPVM-QRGILYNCRVIFRDHTIVMIRPKMFMAD 119 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 ++ E R + +G ICE+++ + + G E + +AS + Sbjct: 120 DGDYREIRCAV--------------IGTEICEELFTPHSPHVQMSLDGVEIFTNGSASHH 165 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF---------------DGASFCF- 223 KL++R +++ +Y NQ G E ++ GA F Sbjct: 166 EFCKLEQRVQLIKSATEKCGGIYLYSNQKGCDGERVYYDGCPLIVLNGDVVAQGAQFSLA 225 Query: 224 ------------------DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM 265 G + Q E + H D L+Q S Sbjct: 226 EVEVITATVDLDDVRAYRSGLVSRSLQAASIKEHFPVV--HLD-SLAQ-------PCSVK 275 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA----------VDA 315 Y EE AC L DY+++ + LSGGIDS A I +D Sbjct: 276 YHSPSEEIRLGPACW--LWDYLRRTQSGGYFLPLSGGIDSCSSALIVFSMCELVHARLDC 333 Query: 316 LGKENVQTI-MLPYKYTSPQSLEDAAACAKAL-GCKYDVLPIHDLVNHFFSLMSQFLQEE 373 K+ +Q + + S+ + C L C + + +++++ Sbjct: 334 SDKKVIQDLEAIVGASIDTSSMSPSKICGLLLHTCYMGTINSSNATRDRAAILAK----- 388 Query: 374 PSGIVAENIQSRIRGNILMALS--------NHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 I +NIQ+R+R I + S ++L ++N E+ GY T Y S Sbjct: 389 -QNIALQNIQARLRMVIAYLFAQLLPWTRDRRSSLLVLGSANVDEMLRGYLTKYDCSSAD 447 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-----HQTDQ 480 NPL + K + + ++ L L+E + P+AEL P QTD+ Sbjct: 448 LNPLGGISKVDLVEFV--KHMAESVPELDILSEFV-----SAPPTAELEPITLQHVQTDE 500 Query: 481 ESL 483 + + Sbjct: 501 DDM 503 >gi|323439857|gb|EGA97573.1| NAD synthetase [Staphylococcus aureus O11] Length = 273 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAA---IAVDALGKENVQ----TIMLPYKYTSPQ 334 +++YVQ ++F K +++G+SGG DS L I+V+ L +E + + LPY Sbjct: 31 IKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQISVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVEQALRF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVSPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|259146827|emb|CAY80083.1| Qns1p [Saccharomyces cerevisiae EC1118] gi|323348243|gb|EGA82492.1| Qns1p [Saccharomyces cerevisiae Lalvin QA23] Length = 714 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 121/594 (20%), Positives = 206/594 (34%), Gaps = 129/594 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ + A +G L + EL I+GY D F+ Sbjct: 5 ITLATCNLNQWALDFEGNRDRILQSIKIAKERGARLRVGPELEITGYGCLDHFFENDVCL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + G + +G P + N ++ G I+ +R KI L N + Sbjct: 65 HSWEMYAQIIKNKETHGLILDIGMPVLHKNVRYNCRLLSLDGEILFIRPKIWLANDGNYR 124 Query: 125 EKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F ++G + + I D +G CE+++ + Sbjct: 125 EMRFFTPWMKPGVVEDFILPPEIQKVTGQRLVPFGDAVINSLDTCIGTETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + + S + KL KR +++ +Y NQ G D L +DG Sbjct: 185 HIAMSLDGVEIMTNSSGSHHELRKLNKRLDLILNATKRCGGVYLYANQRGCDGDRLYYDG 244 Query: 219 ASF------------------------CFDGQQQLAFQMKHFSE--QNFMTEWHYDQ--- 249 + D ++ ++++ S Q + E + + Sbjct: 245 CALIAINGTIVAQGSQFSLDDVEVVTATVDLEEVRSYRVAVMSRGLQASLAEIKFKRIDI 304 Query: 250 --QLSQWNYMSDDSAS------TMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +L+ D + Y +EE A AC + DY+++ N + LSG Sbjct: 305 PVELALMTSRFDPTVCPTKVREPFYHSPEEEIALGPAC--WMWDYLRRCNGTGFFLPLSG 362 Query: 302 GIDSALCAAI-------AVDALGKENVQTIMLPYKYT---------SPQSLED------- 338 GIDS A I DA N Q I K T SPQ L Sbjct: 363 GIDSCATAMIVHSMCRLVTDAAQNGNEQVIKDVRKITRSGDDWIPDSPQDLASKIFHSCF 422 Query: 339 -------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 A + A+G + L + LV+ SL ++P Sbjct: 423 MGTENSSKETRNRAKDLSNAIGSYHVDLKMDSLVSSVVSLFEVATGKKPIYKIFGGSQIE 482 Query: 376 GIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +NIQ+R+R + + + N ++L ++N E GY T Y S Sbjct: 483 NLALQNIQARLRMVLSYLFAQLLPWVRGIPNSGGLLVLGSANVDECLRGYLTKYDCSSAD 542 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + ++ + I L +P+AEL P D Sbjct: 543 INPIGGISKTDLKRFIAYASKQ--------YNMPILNDFLNATPTAELEPMTKD 588 >gi|89893066|ref|YP_516553.1| hypothetical protein DSY0320 [Desulfitobacterium hafniense Y51] gi|219666333|ref|YP_002456768.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfitobacterium hafniense DCB-2] gi|89332514|dbj|BAE82109.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219536593|gb|ACL18332.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfitobacterium hafniense DCB-2] Length = 289 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 15/250 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ML+ ++I +AQ VGD N+ + R E A+ QG+ L+ + E + GY P+D Sbjct: 1 MLQDIRIGLAQFEAKVGDTERNLQEIIRTAEVASSQGVSLLCYPECALHGYSPKDASEIA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKINLP 118 + S A+ L+ D G ++VG + EG S +I+ V K++L Sbjct: 61 DPLD--SMAVARLRECARDLGLILLVGMVEKSPEGKKPYISQLIVFPDREPEVYRKVHLG 118 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 E+ F +G S ++ I IC D W + +GAE F+ +ASP Sbjct: 119 RI----EQHYFTAGDSFPIFAAGGVKFSIGICWD-WHFPELSAICSLKGAEIQFAPHASP 173 Query: 179 YYHNKLK---KRHEIVTGQISHVHLPIIYVNQVGGQD-ELIFDGASFCFDGQQQLAFQMK 234 K KR+ + V+L N VG + + F G F + ++ + + Sbjct: 174 VVSGDRKEIWKRYLGARAYDNSVYL--CACNLVGTNNRDKEFSGGILVFGPKGEVLAENQ 231 Query: 235 HFSEQNFMTE 244 EQ F+ + Sbjct: 232 DTQEQLFVVD 241 >gi|325130399|gb|EGC53163.1| NAD+ synthetase [Neisseria meningitidis OX99.30304] Length = 273 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 18/182 (9%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PY 328 + +A V L +Y + N ++G+SGGIDSA+ +A+A + T++L P Sbjct: 12 DTQAVITHIVRWLDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRPTLLLDMPI 67 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAE 380 + P LE A + L +Y + DL + F + +P + Sbjct: 68 R-QHPDQLERARLHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGIHQTAFDNQPLSLA-- 124 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N +SR+R L ++ T NK E VG+ T YGD +P+ DL KTQV++ Sbjct: 125 NARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYR 184 Query: 440 LA 441 LA Sbjct: 185 LA 186 >gi|229132869|ref|ZP_04261714.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-ST196] gi|228650696|gb|EEL06686.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-ST196] Length = 272 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DY++ ++G+SGG DS L A +AV+ + G ++ LPYK + Sbjct: 30 LKDYLKTTGAKGFVLGISGGQDSTLAGRLAQLAVEEVRNEGGNATFISVRLPYKVQKDE- 88 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 89 -DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNKGNVKARIRMVTQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 148 GGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRDLLQELG 198 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 199 A-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|13475627|ref|NP_107194.1| NAD synthetase [Mesorhizobium loti MAFF303099] gi|25090786|sp|Q988H0|NADE_RHILO RecName: Full=NH(3)-dependent NAD(+) synthetase gi|14026383|dbj|BAB52980.1| NH(3)-dependent NAD(+) synthetase [Mesorhizobium loti MAFF303099] Length = 319 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 55/201 (27%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS----------------LED 338 V++GLSGGIDS++ A + A GK+ V + +P + +S S LED Sbjct: 30 VVVGLSGGIDSSVVATLCTRAFGKDKVLGLFMPERDSSGDSLRLGRRVAAQLGIENILED 89 Query: 339 AAACAKALG---------------------CKYDVLPIHDLVNHFFSLMSQFLQEEPSG- 376 +A+G CK + P+ L ++ ++ ++ ++P G Sbjct: 90 IGPAVEAVGAYRRQLEAIRTVVPDYGDGWKCKLVIEPV--LESNGLNI-TRLTVQDPEGK 146 Query: 377 --------------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + A N + R+R ++ K + T N+ E G+ GD Sbjct: 147 VDTVRLSPAAYLQIVAATNYKQRLRKMTEYYHADRLKYAVAGTPNRLEYDQGFFVKQGDG 206 Query: 423 SGGFNPLKDLYKTQVFQLASW 443 + P+ LYKTQV+QLA + Sbjct: 207 TADVMPIVHLYKTQVYQLAEY 227 >gi|298207897|ref|YP_003716076.1| NH(3)-dependent NAD synthetase [Croceibacter atlanticus HTCC2559] gi|83850538|gb|EAP88406.1| NH(3)-dependent NAD synthetase [Croceibacter atlanticus HTCC2559] Length = 263 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 17/169 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L+DY ++G+SGGIDSA LCA + L E +P + +P + Sbjct: 14 LKDYAINAKQDGFVVGVSGGIDSAVTSTLCAMTGLRTLCVE------MPI-HQAPSQVTR 66 Query: 339 AAACAKALGCKY-DVLPIH-DLVNHFFSLMSQFLQEEPSG---IVAENIQSRIRGNILMA 393 A L ++ +V + +L F +L + EPS + N+++R+R L Sbjct: 67 AQEHIAQLKNRFANVTNVEVNLTETFETLKTGLPAAEPSDQLDLTLANVRARLRMTTLYY 126 Query: 394 LSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 + + ++ T NK E VG+ T YGD +P+ DL K++V+++A Sbjct: 127 FAGLHRYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLLKSEVYEIA 175 >gi|218768381|ref|YP_002342893.1| NH(3)-dependent NAD synthetase [Neisseria meningitidis Z2491] gi|121052389|emb|CAM08721.1| NH(3)-dependent NAD synthetase [Neisseria meningitidis Z2491] Length = 273 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 18/182 (9%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PY 328 + +A V L +Y + N ++G+SGGIDSA+ +A+A + T++L P Sbjct: 12 DTQAVITHIVRWLDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRTTLLLDMPI 67 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAE 380 + P LE A + L +Y + DL + F + +P + Sbjct: 68 R-QHPDQLERARLHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGVHQTAFDNQPLSLA-- 124 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N +SR+R L ++ T NK E VG+ T YGD +P+ DL KTQV++ Sbjct: 125 NARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYR 184 Query: 440 LA 441 LA Sbjct: 185 LA 186 >gi|325860044|ref|ZP_08173171.1| hydrolase, carbon-nitrogen family [Prevotella denticola CRIS 18C-A] gi|325482570|gb|EGC85576.1| hydrolase, carbon-nitrogen family [Prevotella denticola CRIS 18C-A] Length = 294 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 25/281 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 +K+LKI I Q + V D N+ + + +G +L++ EL S Y E++ Sbjct: 1 MKELKIGILQQHNVA-DTRTNMERLAEGIADLAHRGAELVVLQELHNSLYFCQTENVENF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKINL 117 + D + + G IV + G+ + +VVI G+I K+++ Sbjct: 60 DLAEPIPGPSTDFYGNLARELGVVIVASLFEKRAPGLYHNTAVVIEKDGSIAGKYRKMHI 119 Query: 118 PNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ ++EK F G P+ RLG+L+C D W + + QGAE L A Sbjct: 120 PDDPAYYEKFYFTPGDLGFHPVDTSVGRLGVLVCWDQWY-PEAARLMALQGAEMLVYPTA 178 Query: 177 SPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGASF 221 Y K ++R T H LP+I VN+VG + + + F G+SF Sbjct: 179 IGYESSDTDEEKQRQREAWTTVMRGHAVANGLPVIAVNRVGYEPDPSEQTGGIQFWGSSF 238 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSD 259 Q +L ++ E++ + H +Q W ++ D Sbjct: 239 AAGPQGELLYRASESKEESVVVSINLDHSEQVRRWWPFLRD 279 >gi|325142528|gb|EGC64928.1| NAD+ synthetase [Neisseria meningitidis 961-5945] gi|325198508|gb|ADY93964.1| NAD+ synthetase [Neisseria meningitidis G2136] Length = 273 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 18/182 (9%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PY 328 + +A V L +Y + N ++G+SGGIDSA+ +A+A + T++L P Sbjct: 12 DTQAVITHIVRWLDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRTTLLLDMPI 67 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAE 380 + P LE A + L +Y + DL + F + +P + Sbjct: 68 R-QHPDQLERARLHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGVHQTAFDNQPLSLA-- 124 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N +SR+R L ++ T NK E VG+ T YGD +P+ DL KTQV++ Sbjct: 125 NARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYR 184 Query: 440 LA 441 LA Sbjct: 185 LA 186 >gi|225866021|ref|YP_002751399.1| hydrolase, carbon-nitrogen family [Bacillus cereus 03BB102] gi|229186280|ref|ZP_04313446.1| Carbon-nitrogen hydrolase [Bacillus cereus BGSC 6E1] gi|225789068|gb|ACO29285.1| hydrolase, carbon-nitrogen family [Bacillus cereus 03BB102] gi|228597180|gb|EEK54834.1| Carbon-nitrogen hydrolase [Bacillus cereus BGSC 6E1] Length = 280 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 11/180 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGLETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 >gi|254425023|ref|ZP_05038741.1| hydrolase, carbon-nitrogen family [Synechococcus sp. PCC 7335] gi|196192512|gb|EDX87476.1| hydrolase, carbon-nitrogen family [Synechococcus sp. PCC 7335] Length = 364 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 22/171 (12%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDL 56 K +K A QL+PV+ +G + K +A EA ++G+DLI+F E FI YP P L Sbjct: 5 KTVKAAAVQLSPVLHSQSGTVEKVLKAIGEAAKEGVDLIVFPETFIPYYPYFSFVLPPVL 64 Query: 57 VFKKSF------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 + K+ + D + IV+G +D+ + N+ ++ DA G + Sbjct: 65 MGKEHMRLYEEAVVVPGPVTDAVGQAARVHQMVIVLGVNERDKGSLYNTQLVFDATGECV 124 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 R K+ P Y HE+ + G + V RLG L C W++ N Sbjct: 125 LKRRKLT-PTY---HERMVWGQGDGSGLQVCETAVGRLGTLAC---WEHYN 168 >gi|57650664|ref|YP_186798.1| NAD synthetase [Staphylococcus aureus subsp. aureus COL] gi|87162145|ref|YP_494545.1| NAD synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195812|ref|YP_500622.1| NAD synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151222062|ref|YP_001332884.1| NAD synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161510136|ref|YP_001575795.1| NAD synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140366|ref|ZP_03564859.1| NAD synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451021|ref|ZP_05699057.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus A5948] gi|262049951|ref|ZP_06022811.1| NAD(+) synthetase [Staphylococcus aureus D30] gi|262052810|ref|ZP_06024997.1| NAD(+) synthetase [Staphylococcus aureus 930918-3] gi|282923252|ref|ZP_06330933.1| NAD+ synthetase [Staphylococcus aureus A9765] gi|284024960|ref|ZP_06379358.1| NAD synthetase [Staphylococcus aureus subsp. aureus 132] gi|294849462|ref|ZP_06790204.1| NAD+ synthetase [Staphylococcus aureus A9754] gi|304379102|ref|ZP_07361849.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|71152006|sp|Q5HEK9|NADE_STAAC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|122540519|sp|Q2G236|NADE_STAA8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|123485176|sp|Q2FFI3|NADE_STAA3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030758|sp|A6QIE0|NADE_STAAE RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030759|sp|A8Z2S7|NADE_STAAT RecName: Full=NH(3)-dependent NAD(+) synthetase gi|57284850|gb|AAW36944.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus subsp. aureus COL] gi|87128119|gb|ABD22633.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203370|gb|ABD31180.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374862|dbj|BAF68122.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368945|gb|ABX29916.1| NAD(+) synthase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257861263|gb|EEV84075.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus A5948] gi|259159303|gb|EEW44360.1| NAD(+) synthetase [Staphylococcus aureus 930918-3] gi|259161959|gb|EEW46541.1| NAD(+) synthetase [Staphylococcus aureus D30] gi|269941384|emb|CBI49781.1| putative NAD synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282593163|gb|EFB98162.1| NAD+ synthetase [Staphylococcus aureus A9765] gi|294823599|gb|EFG40026.1| NAD+ synthetase [Staphylococcus aureus A9754] gi|302751785|gb|ADL65962.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342337|gb|EFM08229.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196217|gb|EFU26572.1| NAD synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320139706|gb|EFW31575.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|320142377|gb|EFW34191.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314590|gb|AEB89003.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329728615|gb|EGG65045.1| NAD+ synthase [Staphylococcus aureus subsp. aureus 21189] Length = 273 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 +++YVQ ++F K +++G+SGG DS L + +V+ L +E + + LPY Sbjct: 31 IKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVEQALRF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|228987223|ref|ZP_04147344.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772452|gb|EEM20897.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 280 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGLETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|119472827|ref|ZP_01614751.1| Beta-ureidopropionase [Alteromonadales bacterium TW-7] gi|119444722|gb|EAW26028.1| Beta-ureidopropionase [Alteromonadales bacterium TW-7] Length = 297 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 31/286 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAG-NIAKARRAREEANRQGMDLILFTELFISGY--PPEDL- 56 M K+ +A + D A N+AK+ +A EA ++G L++ EL S Y ED+ Sbjct: 1 MTSPAKLTVALVQQSNNDNADENMAKSIKAIREAAKKGAQLVVLQELHRSLYFCQTEDVD 60 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDK 114 VF + S+ +TL + IV + G+ N+ V+L+ G+I K Sbjct: 61 VFDLAETIPGPSS-NTLGELAKELNIVIVASLFEKRATGLYHNTAVVLEKDGSIAGKYRK 119 Query: 115 INLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +++P+ F+EK F G +PI +LG+L+C D W + + GAE L Sbjct: 120 MHIPDDPGFYEKFYFTPGDLGFEPIQTSVGKLGVLVCWDQWF-PEAARLMAMAGAELLIY 178 Query: 174 LNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDG 218 A + N + +++ V Q +H +P+I N+VG + + + F G Sbjct: 179 PTAIGWDPNDDQNEQTRQKDAWVISQRAHAVANGVPVISCNRVGHESDPSGHSSGIQFWG 238 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 SF Q + Q + EQ + E DQ+ S+ W ++ D Sbjct: 239 NSFIAGPQGEFLAQANNIDEQILVVE--VDQKRSENVRRIWPFLRD 282 >gi|295692382|ref|YP_003600992.1| nh(3)-dependent nad( ) synthetase [Lactobacillus crispatus ST1] gi|295030488|emb|CBL49967.1| NH(3)-dependent NAD( ) synthetase [Lactobacillus crispatus ST1] Length = 276 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 48/264 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY++ N F K ++G+SGG DS L + A+ + +T + LPY + Sbjct: 31 LKDYLKANPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDDSYQFIAVRLPYGVQA 90 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQEEPSGIV---AENIQSR 385 Q EDA A K P DL+ + M + ++ I NI++R Sbjct: 91 DAQDAEDAVAFQK---------PDQDLIVNIKEPVDAMVKVVEATGQKITDFNKGNIKAR 141 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R + A++ +K ++ T + +E G+ T +GD + PL L K R Sbjct: 142 QRMVVQYAIAGANKGAVVGTDHAAENFSGFYTKFGDGAADLTPLFRLDK---------RQ 192 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 + LG P + EK+P+A+L +E P P D++ + E Sbjct: 193 GKALLKELG-----CPKHLYEKAPTADL------EEEKPDLP--DEVALGVTYQEIDDYL 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKR 529 +E +D+ +E L S++KR Sbjct: 240 EGKEVSDKAADQIEKLWNKSKHKR 263 >gi|52141456|ref|YP_085372.1| carbon-nitrogen family hydrolase [Bacillus cereus E33L] gi|51974925|gb|AAU16475.1| hydrolase, carbon-nitrogen family [Bacillus cereus E33L] Length = 259 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 11/178 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q+N V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMNIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQY----GVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 171 >gi|320449291|ref|YP_004201387.1| carbon-nitrogen hydrolase family protein [Thermus scotoductus SA-01] gi|320149460|gb|ADW20838.1| carbon-nitrogen hydrolase family protein [Thermus scotoductus SA-01] Length = 288 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 8/179 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKK 60 ++ A+ Q P + N+A+ E ++++ E ++GY +L + Sbjct: 2 IRHAVLQFRPEKARVKENLARLAERLEALRPHAPEVVVLPEAALTGYFLQGGVRELALTR 61 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN-IIAVRDKINLPN 119 + S + ++ +G +VVGF +D+ NS L+ + ++ V K+ LP Sbjct: 62 HELLELLSGVH--RAVGWEGLLDVVVGFYERDEGAYYNSAAYLELPHRVVHVHRKVFLPT 119 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 Y F E+R G + R R+ ILICED W +S GAE ++ ASP Sbjct: 120 YGVFDEERYLARGRRVEAFNTRFGRVAILICEDFW-HSITAAIAALDGAEAIYVPAASP 177 >gi|317148331|ref|XP_001822695.2| glutamine-dependent NAD(+) synthetase [Aspergillus oryzae RIB40] Length = 717 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 128/593 (21%), Positives = 210/593 (35%), Gaps = 135/593 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSFI 63 + +A LN D GN + + +A + G L + EL I+GY D + +F+ Sbjct: 5 VTLATCSLNQWALDFEGNCERIIESIRQAKKAGATLRVGPELEITGYGVLDGFLEGDTFL 64 Query: 64 QACSSAIDTLK-SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + + +D D + VG P + + N VI II +R K+ L N Sbjct: 65 HSWEMLARIIDHADCQD--IVVDVGMPVRHRNVRYNCRVIFYNRKIILIRPKMWLANDGN 122 Query: 123 FHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNS 157 + E R F I+G P I RD LG+ CE+++ + Sbjct: 123 YREMRYFTPWQRPQEIEDYYLESIVGKITGQYKVPFGDAVISTRDTCLGLETCEELFTPN 182 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIF 216 G E + + + S + KL R +VT +Y NQ G D L + Sbjct: 183 GPHIPYGLAGVEIISNSSGSHHELRKLDTRINLVTQATKLSGGIYLYANQQGCDGDRLYY 242 Query: 217 DGASFCF-------DGQQ----------------------QLAFQMKHFSEQNFMTEWHY 247 DG + G Q A + S+Q Sbjct: 243 DGCAMIVVNGNIVAQGSQFSLNDVEVVTATVDIEEVRTYRSSASRGMQASKQTPFVRLDL 302 Query: 248 DQQLSQWNYMSD------DSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 D +LS+ N +D ++ + Y +EE A AC L DY++++ + LSG Sbjct: 303 DMRLSRQNEEADPGLAPSEAIAPRYHAPEEEVALGPACW--LWDYLRRSGAAGFFLPLSG 360 Query: 302 GIDSALCAAI-------AVDALGKENVQTI--------------MLP------------- 327 GIDS A I + A+ + N Q I LP Sbjct: 361 GIDSCATAIIVHSMCREVIKAVSEGNEQVIKDVRRLCAEPADSTWLPTTSQEVCNRIFHT 420 Query: 328 ----YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-----SGIV 378 + +S ++ + + + +G + +V +L + +P G Sbjct: 421 SYMGTQNSSKETRDRSKRLSTDIGSYHVDFNFDTVVTSLTNLFTMVTNFQPKFKVHGGSR 480 Query: 379 AE-----NIQSRIR-------GNILMALSNHSKA---MLLTTSNKSEISVGYGTLYGDMS 423 AE N+Q+R+R ++L + ++L +SN E GY T Y S Sbjct: 481 AENQALQNVQARLRMVLSYLFASLLPTVRQRPGGGGLLVLASSNVDECLRGYLTKYDASS 540 Query: 424 GGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 NP+ + K + + +W R+S + I L +P+AEL P Sbjct: 541 ADLNPIGSISKVDLKKFIAWSRDSFELP---------ILHEFLNATPTAELEP 584 >gi|269966486|ref|ZP_06180570.1| putative carbon-nitrogen hydrolase [Vibrio alginolyticus 40B] gi|269828943|gb|EEZ83193.1| putative carbon-nitrogen hydrolase [Vibrio alginolyticus 40B] Length = 288 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 16/238 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M K +K A QL D+ N+AKA++A EA + G ++IL ELF + Y E Sbjct: 1 MSKVVKFAALQLTKSW-DLEDNLAKAKKAIREAAQSGANVILPQELFAAPYFCKKQEAKY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + I + + + G I V + + NS+V++DA G ++ K + Sbjct: 60 FELAEETENCRLIKEMSALAKELGVVIPVSYFEKAGNTFFNSLVMIDADGTVLDNYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + + G IC D W + + L GAE +F Sbjct: 120 IPDGPGYSEKYYFSPGDTGFKVWQTKFGKFGAGICWDQW-FPELARSLALHGAEAIFYPT 178 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFD 224 ++ + P + H + G + +P+I N+VG + E F G+SF D Sbjct: 179 AIGSEPQDPTLDSRDHWQRTMQGHSAANLVPVIASNRVGTEVDDGIETTFYGSSFITD 236 >gi|91223883|ref|ZP_01259147.1| putative carbon-nitrogen hydrolase [Vibrio alginolyticus 12G01] gi|91191375|gb|EAS77640.1| putative carbon-nitrogen hydrolase [Vibrio alginolyticus 12G01] Length = 288 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 16/238 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M K +K A QL D+ N+AKA++A EA + G ++IL ELF + Y E Sbjct: 1 MSKVVKFAALQLTKSW-DLEDNLAKAKKAIREAAQNGANVILPQELFAAPYFCKKQEAKY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + I + + + G I V + + NS+V++DA G ++ K + Sbjct: 60 FELAEETENCRLIKEMSALAKELGVVIPVSYFEKAGNTFFNSLVMIDADGTVLDNYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + + G IC D W + + L GAE +F Sbjct: 120 IPDGPGYSEKYYFSPGDTGFKVWQTKFGKFGAGICWDQW-FPELARSLALHGAEAIFYPT 178 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFD 224 ++ + P + H + G + +P+I N+VG + E F G+SF D Sbjct: 179 AIGSEPQDPTLDSRDHWQRTMQGHSAANLVPVIASNRVGTEVDDGIETTFYGSSFITD 236 >gi|163939837|ref|YP_001644721.1| NAD synthetase [Bacillus weihenstephanensis KBAB4] gi|229485725|sp|A9VRQ8|NADE_BACWK RecName: Full=NH(3)-dependent NAD(+) synthetase gi|163862034|gb|ABY43093.1| NAD+ synthetase [Bacillus weihenstephanensis KBAB4] Length = 272 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQS 335 L+DY++ ++G+SGG DS L +A A+ G ++ LPYK + Sbjct: 30 LKDYLKTTGAKGFVLGISGGQDSTLAGRLAQLAVAEVRNEGGNATFISVRLPYKVQKDE- 88 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 89 -DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNKGNVKARIRMVTQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 148 GGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRDLLQELG 198 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 199 A-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|171692267|ref|XP_001911058.1| hypothetical protein [Podospora anserina S mat+] gi|170946082|emb|CAP72883.1| unnamed protein product [Podospora anserina S mat+] Length = 722 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 120/581 (20%), Positives = 197/581 (33%), Gaps = 121/581 (20%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN V D GN+ + + A G L + EL I+GY D + Sbjct: 6 VTVATCNLNQWVLDWEGNLNRIVESIHIAKAAGARLRVGPELEITGYSALDHFHELDVYT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L D G + +G P + N VI G I+ +R K+ L N + Sbjct: 66 HSLEMLSILLQDESTHGILLDIGMPILHRNLRYNCRVICLDGKILLIRPKMWLANDGNYR 125 Query: 125 EKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F + + I + G CE+++ Sbjct: 126 EMRHFTPWMRPRETELFHLPKMLAELQGETHVLFGDAVISTPETAFGAETCEELFTPKAP 185 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE-LIFDG 218 + G E + + + S + KL R +++ +Y NQ G E L FDG Sbjct: 186 HIDMALDGVEIITNSSGSHFTLRKLDTRLQLIMEATRKSGGVYLYANQQGCDGERLYFDG 245 Query: 219 -ASFCFDGQ---QQLAFQMKHFSE---------------------QNFMTEWHYDQQLSQ 253 A +G Q F +K Q ++ Y + + Sbjct: 246 CAMIIVNGDIVAQGSQFGLKDVEVVTATVDLEEVRSYRAAISRGLQAATSDARYQRIQTP 305 Query: 254 WNYMSDDSASTM-----------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + +D + + P++EE A C L DY++++ ++ LSGG Sbjct: 306 FELAPEDDDADIEKRPTLPMQPRVHPVEEEIALSGGCYLW--DYLRRSGTAGYLVPLSGG 363 Query: 303 IDSALCAA-------IAVDALGKENVQTI------------MLP---------------- 327 IDS A I +DA+ +EN Q I +LP Sbjct: 364 IDSCATAVIVYSMCRIVMDAVEEENQQVIEDVKRLCQYSQGVLPKTPQELCNQIFTTIYM 423 Query: 328 --YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 K +S + + A A+A+G + L I ++ L+ L EP Sbjct: 424 GMKKQSSRDTRQRAKDLAEAIGSHHVNLDIDEVYEAQKKLVVNTLNFEPRFEVEGGSNQE 483 Query: 376 GIVAENIQSRIR-------GNILMALSNH---SKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + +Q+RIR G IL ++L ++N E GY T Y S Sbjct: 484 NLTLQCLQARIRMVTAYEFGQILPTARGRPGGGSLLVLGSANVGESLRGYLTKYDCSSAD 543 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NP+ + K + + +W L +P + LE Sbjct: 544 INPIGSIDKADLKRFIAWAEKEFDLPCLHEFLTAVPTAELE 584 >gi|325955392|ref|YP_004239052.1| N-carbamoylputrescine amidase [Weeksella virosa DSM 16922] gi|323438010|gb|ADX68474.1| N-carbamoylputrescine amidase [Weeksella virosa DSM 16922] Length = 305 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 35/258 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K+KI + Q++ + N+ KA + EA +G ++ ELF S Y D+ + Sbjct: 15 MSKVKIGVVQMS-CTANKEENLQKAIQKVREAADKGAQIVCLQELFTSLYFC-DVEDYDN 72 Query: 62 FIQACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 F A S + + L + G ++ + EG+ N+ +LD G + K++ Sbjct: 73 FDLAESIPGPSTNALADVAKEKGVVVIASLFEKRAEGLYHNTTAVLDVDGTYLGKYRKMH 132 Query: 117 LPNYSEFHEKRTFISG---YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +P+ F+EK F G Y F ++G+LIC D W + GAE LF Sbjct: 133 IPDDPAFYEKFYFTPGDLGYKTFQTKFG--KIGVLICWDQW-YPEAARITSLMGAEILFY 189 Query: 174 LNASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDE--LIFD 217 A + ++ +++ H + G +P++ VN+VG + + + F Sbjct: 190 PTAIGWATDQDEETNKDQYDAWQTIQRSHAVANG------VPVVSVNRVGFEQDGAMKFW 243 Query: 218 GASFCFDGQQQLAFQMKH 235 G SF + Q +L + H Sbjct: 244 GGSFVTNAQGKLLYLASH 261 >gi|121635070|ref|YP_975315.1| NH(3)-dependent NAD synthetase [Neisseria meningitidis FAM18] gi|120866776|emb|CAM10529.1| NH(3)-dependent NAD synthetase [Neisseria meningitidis FAM18] gi|325132443|gb|EGC55136.1| NAD+ synthetase [Neisseria meningitidis M6190] gi|325138217|gb|EGC60786.1| NAD+ synthetase [Neisseria meningitidis ES14902] Length = 273 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 24 LDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRPTLLLDMPIR-QHPDQLERAR 78 Query: 341 ACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 79 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGIHQTAFDNQPLSLA--NARSRLRMLTLY 136 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 137 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|319638475|ref|ZP_07993237.1| NH(3)-dependent NAD(+) synthetase [Neisseria mucosa C102] gi|317400224|gb|EFV80883.1| NH(3)-dependent NAD(+) synthetase [Neisseria mucosa C102] Length = 262 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 16/170 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+DY ++ ++G+SGGIDSA+ + +A A +V + +P + S Q + A Sbjct: 14 LKDYAEQARAKGFVVGVSGGIDSAVVSTLA--AQTGLSVLLLEMPIRQKSDQ-VNRAQEH 70 Query: 343 AKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMA 393 L +Y D+ P D F + E P+ +A N +SR+R L Sbjct: 71 MGRLKQRYPNVKAQSVDLTPAFDT---FADTVDVSETEFPNKQLALANARSRLRMTTLYY 127 Query: 394 LSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++ T NK E VG+ T YGD +P+ DL KTQV+ LA+ Sbjct: 128 YGQLHGLLVAGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYALAA 177 >gi|116053069|ref|YP_793388.1| NAD synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|296391758|ref|ZP_06881233.1| NAD synthetase [Pseudomonas aeruginosa PAb1] gi|122256918|sp|Q02F98|NADE_PSEAB RecName: Full=NH(3)-dependent NAD(+) synthetase gi|115588290|gb|ABJ14305.1| NAD synthase [Pseudomonas aeruginosa UCBPP-PA14] Length = 275 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 39/233 (16%) Query: 271 EEEADYNACVLSLRDYVQK----NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 + EAD A + ++Q+ +++G+SGG+DS +A A+ + QT Sbjct: 19 QSEADVQAQIARRIAFIQQCLKDAGLKTLVLGISGGVDSLTAGLLAQRAVEQLREQTGDQ 78 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF-----LQE 372 + LPY+ ++A A A + D ++ +L Q L+ Sbjct: 79 AYRFIAVRLPYQVQQ----DEADAQASLATIRADEEQTVNIGPSVKALAEQLEALEGLEP 134 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 S V NI++RIR A++ +++ T + +E +G+ T +GD + PL L Sbjct: 135 AKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGL 194 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 K QV LA + P +++EK P+A +LRP D+ S Sbjct: 195 AKHQVRALARALGA--------------PENLVEKIPTADLEDLRPGHPDEAS 233 >gi|229589681|ref|YP_002871800.1| putative hydrolase [Pseudomonas fluorescens SBW25] gi|229361547|emb|CAY48423.1| putative hydrolase [Pseudomonas fluorescens SBW25] Length = 253 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 10/154 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L +A AQ + GD+A NI + A R G+ ++F EL ++GY P + Sbjct: 5 MTALTLAAAQSISIAGDLAANIKRHLTFMGTAARHGVQWLVFPELSLTGYEPS--LAAGL 62 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNIIAVRDKINL-P 118 I + L+ VVG P + Q GVL ++L A + V K +L P Sbjct: 63 AIAPDDPVLAPLREMAQALRLTAVVGMPIRLAPQAGVLIGALVLGADGSMVVYTKQHLHP 122 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 E+R F++G P+ +R R+ + +C D Sbjct: 123 G-----EERAFVAGQGGAPLEWRSERIALAVCAD 151 >gi|257784699|ref|YP_003179916.1| amidohydrolase-like protein [Atopobium parvulum DSM 20469] gi|257473206|gb|ACV51325.1| amidohydrolase-like protein [Atopobium parvulum DSM 20469] Length = 595 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 7/143 (4%) Query: 193 GQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLS 252 G + +I N VG +F G+SF L Q FSE M DQ Sbjct: 193 GDVEEFDSWLIAANAVGAYGNQVFCGSSFFLSPSGDLVKQAASFSED--MVVCDVDQDTI 250 Query: 253 QWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + N+ +D+A L + +RDY K+ F V I + G ++S + A+A Sbjct: 251 E-NFDREDTAGVYNSALTT----WGVLATGVRDYTVKSGFDGVFIAVDGSLNSLVTVALA 305 Query: 313 VDALGKENVQTIMLPYKYTSPQS 335 DALG V ++LP K + S Sbjct: 306 SDALGPMRVHVLLLPNKNSRATS 328 >gi|332992338|gb|AEF02393.1| NAD synthetase [Alteromonas sp. SN2] Length = 277 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 33/224 (14%) Query: 290 NNFHKVIIGLSGGIDSALC---AAIAVDALGKE---NVQTIMLPYKYTSPQSLEDAAACA 343 + + +++G+SGGIDS A +AV+ L +E N Q + + Y + DA Sbjct: 36 SGLNSLVLGISGGIDSCTLGKLAQLAVNELNQEKHENFQFVAVRLPYQTQADEADAQLSI 95 Query: 344 KAL----GCKYDVLPIHDLVNHFF--SLMSQFL---QEEPSGIVAENIQSRIRGNILMAL 394 + +V P D ++ SL S L E V N+++R R I + Sbjct: 96 DFIEPSHSVTVNVQPGADAIHASTTESLSSAGLLPESEAKRDFVKGNVKARTRMVIQYEI 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + ++L T + +E G+ T YGD + PL L K QV QLAS + Sbjct: 156 AGMVDGLVLGTDHSAENITGFYTKYGDGACDLAPLFGLSKRQVRQLASHLGA-------- 207 Query: 455 PLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 P +++ K+P+A+L P + D+++L Y +DD ++ Sbjct: 208 ------PQTVITKAPTADLETLAPQKADEQALGMTYDQIDDFLE 245 >gi|196045898|ref|ZP_03113127.1| hydrolase, carbon-nitrogen family [Bacillus cereus 03BB108] gi|196023338|gb|EDX62016.1| hydrolase, carbon-nitrogen family [Bacillus cereus 03BB108] Length = 280 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 11/180 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGLETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNSKGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 >gi|228909866|ref|ZP_04073687.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis IBL 200] gi|228849701|gb|EEM94534.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis IBL 200] Length = 280 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 15/227 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+K+A Q++ GD+ NI A+ EA ++ D+I+ EL+ +GY DL Sbjct: 20 EKMKVACIQMDIAFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGY---DLTRLSEI 76 Query: 63 IQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 A ++T LK + G IV G +Q ++GV N++ ++D G ++ K++L Sbjct: 77 --ADRDGLETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVDKEGELVNEYSKVHL 134 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + E + I+G S DI IC DI + H K G++ LF + Sbjct: 135 --FQLMDEHKYLIAGNSTGEFKLDDIECAGTICYDIRFPEWMRVHTAK-GSKVLFVVAEW 191 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L ++ + ++ N+ G F G S D Sbjct: 192 PLV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|85860730|ref|YP_462932.1| N-carbamoylputrescine amidase [Syntrophus aciditrophicus SB] gi|85723821|gb|ABC78764.1| N-carbamoylputrescine amidase [Syntrophus aciditrophicus SB] Length = 291 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 17/251 (6%) Query: 3 KKLKIAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 KK K+++ + G D+ N+A A E A QG ++ F ELF S Y D+ Sbjct: 4 KKRKVSVGLIQMACGPDMEQNLAGALEKAEIAAGQGAQILCFQELFTSLYFC-DVESYDC 62 Query: 62 FIQACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGN-IIAVRDKIN 116 F A + + L++ IV + EG+ N+V ++DAG + K++ Sbjct: 63 FRLAEAVPGPTTERLQALARKRDVAIVASLFEKRAEGLYHNTVAVIDAGGEYLGKYRKMH 122 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ ++EK F G R ++G LIC D W + GA+ LF Sbjct: 123 IPDDPGYYEKFYFTPGDLGYRVFTTRYAKIGTLICWDQWY-PEAARITALMGADILFYPT 181 Query: 176 ASPY--YHNKLKKRHEIVTGQ-ISHVH-----LPIIYVNQVGGQDELIFDGASFCFDGQQ 227 A + N+ R + Q I H L ++ VN+ G + E+ + G SF + Sbjct: 182 AIGWATAQNEEANREQFDAWQTIQRGHAIANGLHVVAVNRTGREGEMQYWGGSFVSNPLG 241 Query: 228 QLAFQMKHFSE 238 + +Q H E Sbjct: 242 TVLWQAPHHEE 252 >gi|16799859|ref|NP_470127.1| hypothetical protein lin0785 [Listeria innocua Clip11262] gi|16413236|emb|CAC96017.1| lin0785 [Listeria innocua Clip11262] Length = 296 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 29/266 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFKKSF- 62 LK+A+ Q V D N+ + + +EA+R+G DL+LF E++ +GY PP + F + Sbjct: 4 LKVALVQQQAVPNDKEANLNLSIKYIKEAHRKGADLVLFPEMWSNGYAPPFETAFDEPMD 63 Query: 63 --------------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 + S+ + TL+ + G+ + + ++ N+ +I+D G Sbjct: 64 AGFEEERTRWLADAVARDSAYVTTLRKLAKELNIGVCATYLSKTKQKPQNTAIIIDRNGE 123 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 II K++ +F + SG + F I+LG++IC D + + L +G Sbjct: 124 IILDYAKVHT---CDFSLEALLQSGDEFNVCEFDGIKLGVMICYDR-EFPESARVLMLKG 179 Query: 168 AEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 AE + NA +P N+L R E + G ++ + P + ++FD Sbjct: 180 AEIILVPNACDMNPARLNQLNSRAFENMVG-VAMANYPGEKWGRSTAFSPIVFDENE--- 235 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D + + SE F+ E++ D+ Sbjct: 236 DYRDNTIIETDDVSEGIFIAEFNLDE 261 >gi|167035247|ref|YP_001670478.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida GB-1] gi|166861735|gb|ABZ00143.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida GB-1] Length = 298 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 20/233 (8%) Query: 2 LKKLKIAIAQLNPVVG--DIAGNIAKARRAREEANRQGMDLILFTELFISGYP----PED 55 + ++IA+ Q +P VG GN++K A R+G +LI+ EL +GY E Sbjct: 8 VSPVRIAVIQYDPQVGVEHSDGNLSKGLALARRAAREGANLIVLPELANTGYTFHSRAEA 67 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 ++ + S + + + + GF +D + +S + ++ K Sbjct: 68 YAHAETLQEGRS--LKAWAAFAREHRVYLAAGFTERDGLKLYDSAALFGPNGLLGHYRKA 125 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 +L N EK F G P+ I R+G+LIC DIW + + + QGA+ + SL Sbjct: 126 HLWN----QEKLWFTPGNLGFPVFETAIGRIGLLICWDIWF-PEVPRLMAAQGADIICSL 180 Query: 175 N-----ASPYYHNKLKKRHEIVTGQISHV-HLPIIYVNQVGGQDELIFDGASF 221 N P + + +T +HV ++ I N++G + F G S Sbjct: 181 NNWVWTPPPLFDEAGRCMASYLTMTAAHVNNVYIAAANRIGNERGGRFLGCSL 233 >gi|92114959|ref|YP_574887.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chromohalobacter salexigens DSM 3043] gi|91798049|gb|ABE60188.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chromohalobacter salexigens DSM 3043] Length = 260 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 16/222 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK--SF 62 +K+ +AQ +PV GD+A N+A R ++A G DL++ EL +SGY +F++ Sbjct: 1 MKLMLAQTDPVCGDVAANLASLARQCQQAVAAGADLLVLPELALSGYN----IFERLEEL 56 Query: 63 IQACSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPN 119 + I ++ + ++ G + +G L ++V+I D G IA K L + Sbjct: 57 AEPVGGPIAQRAAELAAEHELFLLFGLAERQADGRLTNSAVLIDDRGERIATYHKRQLWD 116 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 E F +G + R RLG++IC D + + + L QGA+ + S A+ Sbjct: 117 ----REHAFFAAGEDCCVVETRLGRLGLMICYD-NEFPEVARALATQGAQVILSPTAN-M 170 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 N ++ +I + + + +N+ G + EL + G S Sbjct: 171 VPNAERQALQIRARALDN-QCFVACINRAGEEAELHYCGNSL 211 >gi|228991028|ref|ZP_04150990.1| NH(3)-dependent NAD(+) synthetase [Bacillus pseudomycoides DSM 12442] gi|228997112|ref|ZP_04156742.1| NH(3)-dependent NAD(+) synthetase [Bacillus mycoides Rock3-17] gi|229004768|ref|ZP_04162502.1| NH(3)-dependent NAD(+) synthetase [Bacillus mycoides Rock1-4] gi|228756482|gb|EEM05793.1| NH(3)-dependent NAD(+) synthetase [Bacillus mycoides Rock1-4] gi|228762644|gb|EEM11561.1| NH(3)-dependent NAD(+) synthetase [Bacillus mycoides Rock3-17] gi|228768704|gb|EEM17305.1| NH(3)-dependent NAD(+) synthetase [Bacillus pseudomycoides DSM 12442] Length = 272 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 38/244 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-------GKEN 320 P+ + +A+ + L+DY++K ++G+SGG DS L +A A+ G Sbjct: 15 PVIDPKAETRKRIDFLKDYLRKTGAKGFVLGISGGQDSTLAGRLAQLAVEEVRNEGGNAT 74 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKAL-----GCKYDVLPIHD-LVNHFFSLMSQFLQEEP 374 + LPY Q ED A A +D+ D N + L+ + L + Sbjct: 75 FIAVRLPYHV---QKDEDDAQLALQFIQPDQSVAFDIASTVDAFSNQYKDLLGESLTDFN 131 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 G N+++RIR A+ +++ T + +E G+ T +GD PL L K Sbjct: 132 KG----NVKARIRMVTQYAIGGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK 187 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG + K P+A+L +P Q D+ L Y LD Sbjct: 188 ---------RQGRALLQELGA-----EERLYLKMPTADLLDEKPGQADETELGITYDQLD 233 Query: 491 DIIK 494 D ++ Sbjct: 234 DYLE 237 >gi|296332670|ref|ZP_06875130.1| NAD synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673014|ref|YP_003864686.1| NAD synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149950|gb|EFG90839.1| NAD synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411258|gb|ADM36377.1| NAD synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 272 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 30/225 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKEN--VQTIMLPYKYTSPQSLE 337 L+ Y++K ++G+SGG DS L A +AV+ + +E Q I + + + Q + Sbjct: 30 LKQYLKKTGAKGFVLGISGGQDSTLAGRLAQLAVERIREEGGVAQFIAVRLPHGTQQDED 89 Query: 338 DAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DA K + K+D I V+ F Q ++ + N+++R R A Sbjct: 90 DAQLALKFIKPDKSWKFD---IKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYA 146 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 + +++ T + +E G+ T YGD PL L K R + L Sbjct: 147 IGGQEGLLVIGTDHAAEAVTGFFTKYGDGGADLLPLTGLTK---------RQGKSLLKEL 197 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G P + K P+A+L +P Q D+ L Y +DD ++ Sbjct: 198 GA-----PERLYLKEPTADLLDDKPQQADETELGISYEEIDDYLE 237 >gi|296102787|ref|YP_003612933.1| putative NAD synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057246|gb|ADF61984.1| putative NAD synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 275 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 54/268 (20%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y++ N+F K +++G+SGG DS L + A+ G E +Q + LPY + Sbjct: 30 LKSYLKTNSFLKTLVLGISGGQDSTLTGKLCQMAISELREETGDEALQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN S+++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGSVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ +K +++ T + +E G+ T YGD NP+ L K Q QL Sbjct: 142 RMKAQYSIAGMTKGVVVGTDHAAEAITGFFTKYGDGGTDINPIFRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEES 502 + LG P + +K+P+A+L RP D+ +L Y +DD ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADLEDDRPSLPDEAALGVTYDNIDDYLE-------- 239 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRR 530 ++ ++ + +E +E+KRR Sbjct: 240 ----GKKLDESIAKIIEGWYLKTEHKRR 263 >gi|260777128|ref|ZP_05886022.1| NAD synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260606794|gb|EEX33068.1| NAD synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 275 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 41/235 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------IMLPYKYTSPQ 334 ++ +Q+ +++G+SGG+DS C +A A+ + N +T + LPY Q Sbjct: 28 IKRKLQEARCKALVLGISGGVDSTTCGRLAQLAVNELNEETDGGYQFIAVRLPY---GEQ 84 Query: 335 SLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQ 383 ED A A ++ K V +H + ++ L ++ S I V N++ Sbjct: 85 KDEDEAQIALQFIQPTHSVSVNIKAGVDGLHAASREALA-HTELLPQQASKIDFVKGNVK 143 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R R ++ + ++L T + +E G+ T +GD + PL L K QV ++A+ Sbjct: 144 ARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVREVAAT 203 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + P +++K+P+A EL P + D+++L Y +DD ++ Sbjct: 204 LGA--------------PELLVKKTPTADLEELAPQKADEDALNLTYDQIDDFLE 244 >gi|256824194|ref|YP_003148154.1| NH(3)-dependent NAD(+) synthetase [Kytococcus sedentarius DSM 20547] gi|256687587|gb|ACV05389.1| NH(3)-dependent NAD(+) synthetase [Kytococcus sedentarius DSM 20547] Length = 280 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 37/230 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ----- 322 P QE E + V +Y++ ++G+SGG+DS L +A A + Q Sbjct: 20 PAQEVERRVDFLV----NYLRATGTKGFVLGISGGVDSTLAGRLAQLAAERHREQGGDAV 75 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALGCK----YDVLPIHDLVNHFFSLMSQFLQEEPSG 376 + LP+ + +DA A + + YDV P D F++ L +E S Sbjct: 76 FVAVRLPHHVQHDE--DDARAAMQFVAADEEVIYDVGPAVDAFEEQFAVA---LGQEVSD 130 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 NI++R+R A++ +++ T + +E G+ T +GD PL L+K Q Sbjct: 131 FNKGNIKARLRMVAQYAIAGERSLLVVGTDHGAESVTGFFTKFGDGGADILPLFGLHKGQ 190 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 +LA LG P + K P+A+L +P + D++ L Sbjct: 191 NRELA---------RHLGA-----PERLWAKVPTADLLDDQPGRPDEDEL 226 >gi|307565041|ref|ZP_07627554.1| hydrolase, carbon-nitrogen family [Prevotella amnii CRIS 21A-A] gi|307346210|gb|EFN91534.1| hydrolase, carbon-nitrogen family [Prevotella amnii CRIS 21A-A] Length = 295 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 72/282 (25%), Positives = 117/282 (41%), Gaps = 25/282 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF 58 M K +KI QL+ V DI+ NI + G LI+ EL S Y ED+ Sbjct: 1 MNKIIKIGFLQLHNV-ADISENIKNITEGIKSLAEDGAQLIVLQELHNSLYFCQVEDVNN 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 + D + D G +V + G+ N+ V+ + G I K++ Sbjct: 60 FDLAETIPGFSTDLYSKLSKDLGIVLVTSLFEKRAAGLYHNTAVVFEKDGTIAGKYRKMH 119 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ ++EK F G PI +LG+L+C D W + + QGAE L Sbjct: 120 IPDDPAYYEKFYFTPGDLGFHPINTSLGKLGVLVCWDQWY-PEAARLMALQGAEILIYPT 178 Query: 176 ASPYYHNKLKKRH--------EIVTGQISHVHLPIIYVNQVG------GQDELI-FDGAS 220 A Y + K+ ++ G +LP+I VN+VG Q E I F G+S Sbjct: 179 AIGYSKSDTKEEQARQLDAWKTVMRGHAVANNLPVIAVNRVGFEPDPSKQTEGIEFWGSS 238 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTE---WHYDQQLSQWNYMSD 259 F Q ++ +Q + E+ + + +H ++ W ++ D Sbjct: 239 FIAGPQGEILYQACNNKEEKMIIKLDLYHSEEVRRWWPFLRD 280 >gi|294674111|ref|YP_003574727.1| carbon-nitrogen family hydrolase [Prevotella ruminicola 23] gi|294472438|gb|ADE81827.1| hydrolase, carbon-nitrogen family [Prevotella ruminicola 23] Length = 294 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 19/175 (10%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 +VVI G I+ K+++P+ ++EK F G PI +LG+L+C D W Sbjct: 100 TAVVIESNGEIVGKYRKMHIPDDPAYYEKFYFTPGDLGFHPIQTSVGKLGVLVCWDQW-Y 158 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE--------IVTGQISHVHLPIIYVNQV 208 + + QGAE L A Y N + + ++ G LP+I VN+V Sbjct: 159 PEAARLMAMQGAEMLIYPTAIGYADNDTPEEQQRQRMAWQTVMRGHAVANGLPVIAVNRV 218 Query: 209 G------GQDELI-FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD--QQLSQW 254 G GQ I F G SF Q ++ ++ E++ + E D +Q+ +W Sbjct: 219 GFEPDSSGQTAGIQFWGTSFVAGPQGEIIYEASTDDEESIVVEMDMDRSEQVRRW 273 >gi|261339494|ref|ZP_05967352.1| NAD+ synthetase [Enterobacter cancerogenus ATCC 35316] gi|288318307|gb|EFC57245.1| NAD+ synthetase [Enterobacter cancerogenus ATCC 35316] Length = 275 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 54/268 (20%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ N+F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKSYLKTNSFLKSLVLGISGGQDSTLAGKLSQMAISELREETGDNALQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN S+++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGSVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ ++ +++ T + +E G+ T YGD NPL L K R Sbjct: 142 RMKAQYSIAGMTRGIVVGTDHAAEAITGFFTKYGDGGTDINPLFRLNK---------RQG 192 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEES 502 + + LG P + +K+P+A+L RP D+ +L Y +DD ++ Sbjct: 193 KKLMAALG-----CPEHLYKKAPTADLEDDRPSLPDEAALGVTYDNIDDYLE-------- 239 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ T + +E +E+KRR Sbjct: 240 ----GKTLDEGTAKIIEGWYLKTEHKRR 263 >gi|269213487|ref|ZP_05982072.2| NAD+ synthetase [Neisseria cinerea ATCC 14685] gi|269146233|gb|EEZ72651.1| NAD+ synthetase [Neisseria cinerea ATCC 14685] Length = 273 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 24 LDEYAAQANVKGFVVGVSGGIDSAVVSALA----ARTGRTTLLLDMPIR-QHPDQLERAR 78 Query: 341 ACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 79 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGVHQTAFDNQPLSLA--NARSRLRMLTLY 136 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 137 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|152985096|ref|YP_001350967.1| NAD synthetase [Pseudomonas aeruginosa PA7] gi|189083398|sp|A6VD32|NADE_PSEA7 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|150960254|gb|ABR82279.1| NH3-dependent NAD synthetase [Pseudomonas aeruginosa PA7] Length = 275 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 31/227 (13%) Query: 273 EADYNACVLSLRDYVQK----NNFHKVIIGLSGGIDS---ALCAAIAVDAL----GKENV 321 EAD A + ++Q+ + +++G+SGG+DS L A AV+ L G + Sbjct: 21 EADVQAQIARRIAFIQQCLKDSGLKTLVLGISGGVDSLTAGLLAQRAVEQLREQSGDQAY 80 Query: 322 QTIMLPYKYTSPQSLEDA-AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP--SGIV 378 + I + Y Q DA A+ A + + I V + EP S V Sbjct: 81 RFIAVRLPYQVQQDEADAQASLATIRADEEQTVNIGPSVKALAEQLEALEGLEPAKSDFV 140 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 NI++RIR A++ +++ T + +E +G+ T +GD + PL L K QV Sbjct: 141 IGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLAKHQVR 200 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 LA + P +++EK P+A +LRP D+ S Sbjct: 201 ALARALGA--------------PENLVEKIPTADLEDLRPGHPDEAS 233 >gi|229198158|ref|ZP_04324867.1| Carbon-nitrogen hydrolase [Bacillus cereus m1293] gi|228585318|gb|EEK43427.1| Carbon-nitrogen hydrolase [Bacillus cereus m1293] Length = 280 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G RQ ++GV N++ V+ + G ++ K++L Sbjct: 80 DGLETKEKLIEWSKQ----YGVHIVGGSIARQTEQGVTNTMYVVTNKGELVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNRTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|319653033|ref|ZP_08007138.1| NH(3)-dependent NAD(+) synthetase [Bacillus sp. 2_A_57_CT2] gi|317395382|gb|EFV76115.1| NH(3)-dependent NAD(+) synthetase [Bacillus sp. 2_A_57_CT2] Length = 273 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 25/223 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYK--YTSPQSLE 337 L+DY+ K N ++G+SGG DS L A +AV+ L KE + + + Y Q + Sbjct: 30 LKDYLVKTNSKGYVLGISGGQDSTLAGRLAQLAVEELRKEGKEATFIAVRLPYGVQQDEK 89 Query: 338 DAA-ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-SGIVAENIQSRIRGNILMALS 395 DA A + K V I + V+ + + + EEP N+++R+R A+ Sbjct: 90 DAQLALSFIQADKEVVFNIKNAVDEVKTEYDRIIPEEPLKDYHKGNVKARMRMIAQYAIG 149 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 +++ T + +E G+ T YGD PL L K R + LG Sbjct: 150 GQYGLLVIGTDHAAEAVTGFFTKYGDGGADVLPLSGLTK---------RQGKKLLKELGA 200 Query: 456 LTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 201 -----EERLYLKVPTADLLDQKPGQADETELGISYDELDDYLE 238 >gi|269214381|ref|ZP_05986458.2| NAD+ synthetase [Neisseria lactamica ATCC 23970] gi|269209961|gb|EEZ76416.1| NAD+ synthetase [Neisseria lactamica ATCC 23970] Length = 273 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 24 LDEYAAQANAKGFVVGVSGGIDSAVVSALAA----RTGRTTLLLDMPIR-QHPDQLERAR 78 Query: 341 ACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 79 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGIHQTAFDNQPLSLA--NARSRLRMLTLY 136 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 137 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|225377631|ref|ZP_03754852.1| hypothetical protein ROSEINA2194_03282 [Roseburia inulinivorans DSM 16841] gi|225210495|gb|EEG92849.1| hypothetical protein ROSEINA2194_03282 [Roseburia inulinivorans DSM 16841] Length = 294 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 23/261 (8%) Query: 1 MLKKLKIAIAQLN-PVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M +K + +A + + NIAKA EA +G +IL ELF Y ++ ++ Sbjct: 1 MSRKRNVTVAAVQMKCSTHVEENIAKADALVREAAEKGAQIILLPELFERQYFCQERRYE 60 Query: 60 -KSFIQACSS--AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 F + + A+ + I V F +D + N+V ++DA G+ + + K Sbjct: 61 YYEFAKKVNENDAVKHFSVLAKELSVVIPVSFYEKDVNRLFNTVAVIDADGSNLGIYRKT 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ + EK F+ G + + ++G+ IC D W + + +GAE LF Sbjct: 121 HIPDDHYYQEKFYFVPGDTGFQVFDTAYGKIGVGICWDQW-FPETARAMAVKGAELLFYP 179 Query: 173 -SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQVGGQD------------ELIFDG 218 ++ + P + + + G + +P+I N++G ++ L F G Sbjct: 180 TAIGSEPILECDSMPHWRRAMQGHAAANLMPVIAANRIGTEEVVPCEENGGQRSALTFYG 239 Query: 219 ASFCFDGQQQLAFQMKHFSEQ 239 +SF D +L + +EQ Sbjct: 240 SSFITDQTGELVAEADRKTEQ 260 >gi|46199841|ref|YP_005508.1| beta-ureidopropionase [Thermus thermophilus HB27] gi|46197468|gb|AAS81881.1| beta-ureidopropionase [Thermus thermophilus HB27] Length = 292 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 4/180 (2%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++ A+ Q P + ++A+ R E +++ E ++GY + V + + Sbjct: 1 MSEVRHAVLQFRPEKSRLRESLARLRAHLEALRPHAPQVVVLPEAALTGYFLQGGVRELA 60 Query: 62 FI--QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN-IIAVRDKINLP 118 + + + +G +VVGF +D+ NS L+ + ++ V K+ LP Sbjct: 61 LTRHELLELLVGVYEKVGWEGVLDVVVGFYERDEGAYYNSAAYLELPHRVVHVHRKVFLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 Y F E+R G + R R +LICED W +S GAE ++ +ASP Sbjct: 121 TYGVFDEERYLARGRRVEAFRTRFGRAALLICEDFW-HSITATIAALDGAEVIYVPSASP 179 >gi|59713785|ref|YP_206560.1| NAD synthetase [Vibrio fischeri ES114] gi|75352777|sp|Q5DZX4|NADE_VIBF1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|59482033|gb|AAW87672.1| NAD synthetase, NH3/glutamine-dependent [Vibrio fischeri ES114] Length = 276 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 54/264 (20%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSPQSLEDAAACAK- 344 +I+G+SGG+DS C +A A+ + N++T + LPY Q ED A A Sbjct: 40 LILGISGGVDSTTCGRLAQLAVNELNLETQSSDYQFIAVRLPYGI---QQDEDEAQLALQ 96 Query: 345 --------ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H NH + L + + I V N+++R R + Sbjct: 97 FIQPTHSISINIKNGVDGLHS-ANHIALKDTGLLPTDSAKIDFVKGNVKARARMIAQYEV 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV ++A+ + Sbjct: 156 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVREVAAQLGA-------- 207 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 P +++K P+A EL P + D+++L Y +DD + E I+ D E Sbjct: 208 ------PEQLVKKVPTADLEELAPQKADEDALSVSYDQIDDFL------EGKKIDADAE- 254 Query: 511 NDETVRYVEHLLYGSEYKRRQAPV 534 D ++ + S++KR+ P Sbjct: 255 -DRLIKIYQM----SQHKRKPIPT 273 >gi|330898855|gb|EGH30274.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 264 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ D++GN+ + + + A QG +++ E+F+SGY + Sbjct: 1 MRVALYQCPPLPLDVSGNLTRLEQQAQAAAEQGAQVLICPEMFLSGYNIGAQAVGELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + N+V ++D+ L NY + Sbjct: 61 QDGPAATRIATIAQASGIAILYGYPERAADRQIYNAVQLIDS-------QGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H +K F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSDLDKSMFAAGDDHYPVVELNGWRLGLLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + + R H ++Y N G + E+ + G +S C DG + L Sbjct: 173 MLPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGEIRYCGLSSLCAPDGSRPL 224 >gi|310641922|ref|YP_003946680.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Paenibacillus polymyxa SC2] gi|309246872|gb|ADO56439.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paenibacillus polymyxa SC2] Length = 291 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 18/263 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLV 57 ++K+K+A Q++ +I NI+KA + EA QG +IL ELF + Y D Sbjct: 1 MRKVKVAATQMS-CSTNIEENISKAEKLVREAAAQGAQIILLQELFETPYFCQKEKSDYY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 + ++ + A++ K + + + F + NS+ ++DA G ++ K + Sbjct: 60 VYATELEH-NKAVNHFKKIAKELQVVLPISFYEKKNYARYNSLAVIDADGEVLGKYRKSH 118 Query: 117 LPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + R ++G+ +C D W + + GAE LF Sbjct: 119 IPDGPGYEEKFYFNPGDTGFKVWNTRYAKIGVGVCWDQW-YPEAARCMALMGAEILFYPT 177 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDE----LIFDGASFCFDGQ 226 ++ + P + K H + G + +P+I N++G + + + F G+SF Q Sbjct: 178 AIGSEPQDSSIDSKDHWQTCMLGHAASNLIPVIASNRIGMETDEESSINFYGSSFIAGPQ 237 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQ 249 + E+ E+ D+ Sbjct: 238 GNKITEASRTDEEVLTAEFDLDE 260 >gi|87201105|ref|YP_498362.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Novosphingobium aromaticivorans DSM 12444] gi|87136786|gb|ABD27528.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Novosphingobium aromaticivorans DSM 12444] Length = 282 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 14/234 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 + ++ +A QL P+ G A NI EEA R G ++L ELF Y ++ +F Sbjct: 1 MTEITVAALQL-PLGGGEAENIPAVAALVEEAARGGAQIVLPPELFAGPYFCKVEDEGLF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 ++ ++ ++ G I F +D N++ ++ G ++ + K ++ Sbjct: 60 GLAYTLDEDPSVREMRKLAKAHGIAIPTSFFERDGHHYYNTLAMIGTDGEVMGIYRKSHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPI--VFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 P+ + EK F G + + VF R+G+ +C D W + + GAE LF Sbjct: 120 PDGPGYEEKYYFRPGNTGFKVWDVF-GARIGVGVCWDQW-YPECARAMALMGAELLFYPT 177 Query: 173 SLNASPYYHNKLKKR--HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++ + PY + R + G +P+I N++G +D F G SF D Sbjct: 178 AIGSEPYDADLDTSRMWRRAMLGHAVSNCMPVIAANRIGTEDGQKFYGHSFISD 231 >gi|291001223|ref|XP_002683178.1| predicted protein [Naegleria gruberi] gi|284096807|gb|EFC50434.1| predicted protein [Naegleria gruberi] Length = 310 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 45/260 (17%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN-----VQTIMLPYKYTS---PQSL 336 DY+++ ++ +SGG+DSA+ A+A A+ K N + + P K T ++L Sbjct: 40 DYMKRCGLKACLVSVSGGVDSAVTFALAERAMRKPNSPIKQLLGVAQPIKSTEKIWKRAL 99 Query: 337 EDAAACAKALGCK---YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 E A G + D IH + Q EE GI + + S + + Sbjct: 100 ELEQAYGSTEGVRVVSVDQSEIHTQI--------QERTEEALGIKSGDFASGQLKSYMRT 151 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTL-----------YGDMSGGFNPLKDLYKTQVFQLAS 442 A LL+ + + +G G GD + DL+K++VFQ+ Sbjct: 152 PVGFFAAQLLSQAGFPCVVLGTGNFDEDGYLFYFCKAGDGVADVQLIADLHKSEVFQVG- 210 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEE 501 H + +P SILE PSA+L QTD+ L PY ++ + + +V+ EE Sbjct: 211 ----HALK---------VPLSILEAPPSADLWSGQTDENELGFPYDFVELMTELMVKTEE 257 Query: 502 SFINNDQEYNDETVRYVEHL 521 Q ++ E + E L Sbjct: 258 EQKAIKQSWSPEALNQFEEL 277 >gi|323467087|gb|ADX70774.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus helveticus H10] Length = 276 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 36/258 (13%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+DY++ N F K ++G+SGG DS L + A+ + +T Y++ + P ++ Sbjct: 31 LKDYLKANPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDDSYQFIAVRLPYGVQV 90 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSG-----IVAENIQSRIRGNIL 391 DA+ A A+ ++ P DL+ + + ++ E SG NI++R R + Sbjct: 91 DASDAADAVKFQH---PDQDLIVNIKEPVDAMVKVVEASGQKITDFNKGNIKARQRMVVQ 147 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ +K ++ T + +E G+ T +GD + PL L K R + Sbjct: 148 YAIAGANKGAVVGTDHAAENFSGFYTKFGDGAADLTPLFRLDK---------RQGKMLLK 198 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 LG P + EK+P+A+L + D LP L K I + E +E + Sbjct: 199 ELG-----CPAHLYEKAPTADLEEEKPD---LPDEVALGVTYKEIDDYLEG-----KEVS 245 Query: 512 DETVRYVEHLLYGSEYKR 529 D+ +E L SE+KR Sbjct: 246 DKAADQIEKLWKKSEHKR 263 >gi|229059695|ref|ZP_04197073.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH603] gi|228719708|gb|EEL71307.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH603] Length = 272 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQS 335 L+DY++ ++G+SGG DS L A +AV+ + G ++ LPYK + Sbjct: 30 LKDYLKTTGAKGFVLGISGGQDSTLAGRLAQLAVEEVRNEGGNATFISVRLPYKVQKDE- 88 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 89 -DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLGESLTDFNKGNVKARIRMVTQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 148 GGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRDLLQELG 198 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 199 A-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|15924902|ref|NP_372436.1| NAD synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|15927486|ref|NP_375019.1| NAD synthetase [Staphylococcus aureus subsp. aureus N315] gi|21283582|ref|NP_646670.1| NAD synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49486732|ref|YP_043953.1| NAD synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|148268386|ref|YP_001247329.1| NAD synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150394448|ref|YP_001317123.1| NAD synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156980228|ref|YP_001442487.1| NAD synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|253316922|ref|ZP_04840135.1| NAD synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253734976|ref|ZP_04869141.1| NAD synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|255006700|ref|ZP_05145301.2| NAD synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793296|ref|ZP_05642275.1| NAD+ synthetase [Staphylococcus aureus A9781] gi|258413587|ref|ZP_05681861.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A9763] gi|258421021|ref|ZP_05683952.1| NAD synthetase [Staphylococcus aureus A9719] gi|258430007|ref|ZP_05688377.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A9299] gi|258443475|ref|ZP_05691817.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A8115] gi|258445333|ref|ZP_05693524.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A6300] gi|258447897|ref|ZP_05696031.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A6224] gi|258453330|ref|ZP_05701315.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A5937] gi|269203566|ref|YP_003282835.1| NAD synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282894580|ref|ZP_06302808.1| NAD+ synthetase [Staphylococcus aureus A8117] gi|282928086|ref|ZP_06335693.1| NAD+ synthetase [Staphylococcus aureus A10102] gi|295407294|ref|ZP_06817093.1| NAD+ synthetase [Staphylococcus aureus A8819] gi|296275655|ref|ZP_06858162.1| NAD synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297208943|ref|ZP_06925347.1| NAD(+) synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246181|ref|ZP_06930032.1| NAD+ synthetase [Staphylococcus aureus A8796] gi|300913000|ref|ZP_07130438.1| NAD(+) synthase [Staphylococcus aureus subsp. aureus TCH70] gi|54037883|sp|P65507|NADE_STAAW RecName: Full=NH(3)-dependent NAD(+) synthetase gi|54037885|sp|P99150|NADE_STAAN RecName: Full=NH(3)-dependent NAD(+) synthetase gi|54041653|sp|P65506|NADE_STAAM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|56749188|sp|Q6G820|NADE_STAAS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030721|sp|A7X442|NADE_STAA1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030722|sp|A6U318|NADE_STAA2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030757|sp|A5IU80|NADE_STAA9 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|13701705|dbj|BAB42998.1| NAD synthetase, prefers NH3 over glutamine [Staphylococcus aureus subsp. aureus N315] gi|14247684|dbj|BAB58074.1| NAD synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|21205023|dbj|BAB95718.1| NAD synthetase [Staphylococcus aureus subsp. aureus MW2] gi|49245175|emb|CAG43641.1| putative NAD synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|147741455|gb|ABQ49753.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149946900|gb|ABR52836.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus JH1] gi|156722363|dbj|BAF78780.1| NAD synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|253727158|gb|EES95887.1| NAD synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257787268|gb|EEV25608.1| NAD+ synthetase [Staphylococcus aureus A9781] gi|257839540|gb|EEV64010.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A9763] gi|257842969|gb|EEV67387.1| NAD synthetase [Staphylococcus aureus A9719] gi|257849601|gb|EEV73569.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A9299] gi|257851360|gb|EEV75300.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A8115] gi|257855851|gb|EEV78775.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A6300] gi|257858829|gb|EEV81698.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A6224] gi|257864538|gb|EEV87281.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus A5937] gi|262075856|gb|ACY11829.1| NAD synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282590150|gb|EFB95231.1| NAD+ synthetase [Staphylococcus aureus A10102] gi|282763067|gb|EFC03199.1| NAD+ synthetase [Staphylococcus aureus A8117] gi|285817593|gb|ADC38080.1| NAD synthetase [Staphylococcus aureus 04-02981] gi|294967869|gb|EFG43899.1| NAD+ synthetase [Staphylococcus aureus A8819] gi|296886433|gb|EFH25362.1| NAD(+) synthase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297176888|gb|EFH36145.1| NAD+ synthetase [Staphylococcus aureus A8796] gi|300885778|gb|EFK80985.1| NAD(+) synthase [Staphylococcus aureus subsp. aureus TCH70] gi|312830285|emb|CBX35127.1| NH(3)-dependent NAD(+) synthetase (Nitrogen regulatoryprotein) (Nicotinamide adenine dinucleotide synthetase) (NADS) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129277|gb|EFT85271.1| NAD synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|329724820|gb|EGG61324.1| NAD+ synthase [Staphylococcus aureus subsp. aureus 21172] gi|329731522|gb|EGG67885.1| NAD+ synthase [Staphylococcus aureus subsp. aureus 21193] Length = 273 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 +++YVQ ++F K +++G+SGG DS L + +V+ L +E + + LPY Sbjct: 31 IKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVDQALRF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|255530605|ref|YP_003090977.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pedobacter heparinus DSM 2366] gi|255343589|gb|ACU02915.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pedobacter heparinus DSM 2366] Length = 291 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 33/266 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + K+K+ + Q++ G+ N+ KA EA +G ++ ELF S Y ED Sbjct: 1 MAKVKVGMVQMS-CTGNKQENLDKAIVKIREAAAKGAQIVCLQELFTSLYFCDVEDYANF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINL 117 + D+L+ + G I+ + G+ N+ +LDA G + K+++ Sbjct: 60 DLAEAIPGPSTDSLQVVAKELGVVIIASLFEKRTAGLYHNTTAVLDADGAYLGKYRKMHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIW--KNSNICKHLKKQGAEFLFSL 174 P+ F+EK F G + + ++GILIC D W + S I + GAE +F Sbjct: 120 PDDPAFYEKFYFTPGDLGYKVFQTKFAKIGILICWDQWYPEASRITALM---GAEIMFYP 176 Query: 175 NASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDE--LIFDG 218 A + ++ +++ H + G +P++ VN+VG + + F G Sbjct: 177 TAIGWATDQDEETNKDQYNAWQTIQRSHAVANG------VPVVSVNRVGFEQNGAMKFWG 230 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTE 244 SF + Q ++ + H E+ + E Sbjct: 231 GSFAANAQGKILYLGSHDQEETEVVE 256 >gi|55981870|ref|YP_145167.1| carbon-nitrogen hydrolase family protein [Thermus thermophilus HB8] gi|55773283|dbj|BAD71724.1| carbon-nitrogen hydrolase family protein [Thermus thermophilus HB8] Length = 292 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 6/181 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANR-QGMDLILFTELFISGYPPEDLVFKK 60 + +++ A+ Q P + ++A+ R AR EA R +++ E ++GY + V + Sbjct: 1 MGEVRHAVLQFRPEKSRLRESLARLR-ARLEALRPHAPQVVVLPEAALTGYFLQGGVREL 59 Query: 61 SFI--QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN-IIAVRDKINL 117 + + + + +G +VVGF +D+ NS L+ + ++ V K+ L Sbjct: 60 ALTRHELLELLVGVYEKVGWEGVLDVVVGFYERDEGAYYNSAAYLELPHRVVHVHRKVFL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 P Y F E+R G + R R +LICED W +S GAE ++ +AS Sbjct: 120 PTYGVFDEERYLARGRRVEAFRTRFGRAALLICEDFW-HSITATIAALDGAEVIYVPSAS 178 Query: 178 P 178 P Sbjct: 179 P 179 >gi|258512044|ref|YP_003185478.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478770|gb|ACV59089.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 284 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 24/252 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A+AQ+ GD+ N+ K + EA+ +G D +L EL ++G LV + + Sbjct: 12 LRVAVAQIAIADGDVEANLDKVAQVLCEASARGADFLLLPELCLTG-----LVAGDALVG 66 Query: 65 ACSSAIDTLKSDTHD----GGAGIVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKINLP 118 ++ D G +P + + G + + V+ +G + V KI+L Sbjct: 67 LAEPPGGPIQQAMRDLARHHGVATAFSYPERGENGAFHITTEVVDKSGTPVHVYRKIHL- 125 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLNA 176 +SE E + G + P D G+L C D+ + + L G LF + N Sbjct: 126 -FSE--ENVWYQPGDALAPFSLWDWPSGLLTCYDV-EFPEPARQLALAGCRLLFVNAANM 181 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQQQLAFQMK 234 PY V + + ++Y N+VG + G S DG L + Sbjct: 182 EPYE----GVHRTFVAARAMENQIYVVYCNRVGANARYRYRGNSLVLAPDGAVLLDLGLD 237 Query: 235 HFSEQNFMTEWH 246 + Q EW Sbjct: 238 QEAVQCVDLEWQ 249 >gi|40890135|gb|AAR97412.1| nitrilase [uncultured organism] Length = 353 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 15/107 (14%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS-- 61 KLK+A Q+ PV D IA+A EA R G +L++F E F+ GYP V + S Sbjct: 5 KLKVAAIQVAPVFMDRDATIARACERIAEAARAGAELVVFPEAFVPGYPDWIWVARPSQR 64 Query: 62 -------------FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG 95 + S+++D L+ DGG +V+G ++ E Sbjct: 65 KLLNDLYAHLVSQSVDVPSASVDRLRDAARDGGVTVVIGVNERNTEA 111 >gi|332140416|ref|YP_004426154.1| NAD synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|332141913|ref|YP_004427651.1| NAD synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550438|gb|AEA97156.1| NAD synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|327551935|gb|AEA98653.1| NAD synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 278 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 37/226 (16%) Query: 290 NNFHKVIIGLSGGIDSAL---CAAIAVDALGKENVQT-----IMLPYKYTSPQSLEDAAA 341 + + +++G+SGGIDS A +AVD L +E+ +T + LPY + + EDA Sbjct: 36 SGLNSLVLGISGGIDSCTLGRLAQLAVDELNEEHHETYQFIAVRLPYDTQADE--EDAQK 93 Query: 342 C--------AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILM 392 + A+ K IH + S + + E V N+++R R I Sbjct: 94 SIDFIQPTHSIAVNVKPGADAIHASTSQALSDANLLPESEAKQDFVKGNVKARTRMVIQY 153 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++ ++L T + +E G+ T YGD + PL L K QV +A+ + Sbjct: 154 EIAGMVDGLVLGTDHSAENITGFYTKYGDGACDLAPLFGLSKRQVRAVAAHLGA------ 207 Query: 453 LGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 P +++ K+P+A+L P + D+++L Y +DD ++ Sbjct: 208 --------PHNVITKAPTADLESLSPQKADEQALGMSYDQIDDFLE 245 >gi|298695255|gb|ADI98477.1| probable NAD synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 273 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 +++YVQ ++F K +++G+SGG DS L + +V+ L +E + + LPY Sbjct: 31 IKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVEQALRF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|304387316|ref|ZP_07369509.1| NAD+ synthetase [Neisseria meningitidis ATCC 13091] gi|304338699|gb|EFM04816.1| NAD+ synthetase [Neisseria meningitidis ATCC 13091] Length = 273 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 18/174 (10%) Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSL 336 V L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P L Sbjct: 20 IVRWLDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRPTLLLDMPIR-QHPDQL 74 Query: 337 EDAAACAKALGCKYDVLPIH--DLVNHFFSLMSQF------LQEEPSGIVAENIQSRIRG 388 E A + L +Y + DL + F + +P + N +SR+R Sbjct: 75 ERARLHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGAHQTAFDSQPLSLA--NARSRLRM 132 Query: 389 NILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 L ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 133 LTLYYYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|160941381|ref|ZP_02088718.1| hypothetical protein CLOBOL_06274 [Clostridium bolteae ATCC BAA-613] gi|158435942|gb|EDP13709.1| hypothetical protein CLOBOL_06274 [Clostridium bolteae ATCC BAA-613] Length = 302 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 17/187 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP------E 54 M + IA +PV GD N+ + E +QG DLI+F E ++GY E Sbjct: 1 MKDIITIAAVNFDPVWGDSEDNLKRMLEHIEAQAKQGCDLIVFPETALTGYDDETGKLLE 60 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPR---QDQEGVLNSVVILDAGNIIAV 111 + + ++ + D + T G +V G QD V N+ + +I Sbjct: 61 EKMHRRLAQTVPGPSTDAVCELTKKYGIYVVYGLAERDAQDTSKVYNAAAVCGPDGVIGC 120 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAE 169 KI+LP F E+ + G + P++F +G+ IC D + I ++ + GA Sbjct: 121 CRKIHLP----FAEQNWAVRG--DTPMLFDSPWGTIGVGICYDTYAYPEITRYARAMGAR 174 Query: 170 FLFSLNA 176 + A Sbjct: 175 LFINCTA 181 >gi|34557988|ref|NP_907803.1| hydrolase- amidohydrolase [Wolinella succinogenes DSM 1740] gi|34483706|emb|CAE10703.1| HYDROLASE-Predicted amidohydrolase [Wolinella succinogenes] Length = 290 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 23/244 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 +++A+ Q G I ++R EA++ G +L++ EL S Y E+ F + Sbjct: 1 MRVALIQ-QAFHGSREATIQRSRELILEASKGGAELVVMQELHTSEYFCQSEETRFF-DY 58 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNY 120 + S +GG +V F + G+ N+ V+ + IA R K+++P+ Sbjct: 59 ASFYEEDVRIFSSIAKEGGVVLVGSFFERRSAGIYHNTAVVFEKDGSIAGRYRKMHIPDD 118 Query: 121 SEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F+EK F G +PI +LG+L+C D W + + +GA+ L A + Sbjct: 119 PGFYEKFYFTPGDLGFEPISCSLGKLGVLVCWDQW-YPEAARLMALKGADILLYPTAIGW 177 Query: 180 Y-----HNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGASFCFD 224 + K +++ + Q H LP++ VN+VG + + + F G SF F Sbjct: 178 FDADDLDEKERQKEAWIAIQRGHAVANGLPVVAVNRVGFEKDSSGVLEGIRFWGHSFAFG 237 Query: 225 GQQQ 228 Q + Sbjct: 238 PQGE 241 >gi|31324552|ref|NP_852145.1| glutamine-dependent NAD(+) synthetase [Rattus norvegicus] gi|81866188|sp|Q812E8|NADE_RAT RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing]; AltName: Full=NAD(+) synthetase gi|28569850|dbj|BAC57897.1| NAD+ synthetase [Rattus norvegicus] Length = 725 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 121/604 (20%), Positives = 210/604 (34%), Gaps = 134/604 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN + ++ + A +G L EL I GY D + Sbjct: 1 MGRKVTVATCALNQWALDFEGNFQRILKSIQIAKGKGARYRLGPELEICGYGCWDHYHES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N +VI I+ +R K+ L N Sbjct: 61 DTLLHSLQVLAALLDAPATQDIICDVGMPIMHRNVRYNCLVIFLNRKILLIRPKMALANE 120 Query: 121 SEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWK 155 + E R F + + + +D +G ICE++W Sbjct: 121 GNYRELRWFTPWARSRQTEEYVLPRMLQDLTKQETVPFGDVVLATQDTCIGSEICEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 + ++ G E + + + S + K R ++VT S + NQ G L+ Sbjct: 181 PCSPHVNMGLDGVEIITNASGSHHVLRKAHTRVDLVTMATSKNGGIYLLANQKGCDGHLL 240 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQ---------------NFMTEWHYDQQLSQWNY---- 256 + +DG +A F++ + Y ++S N Sbjct: 241 Y------YDGCAMIAMNGSIFAQGTQFSLDDVEVLTATLDLEDVRSYRAKISSRNLEATR 294 Query: 257 --------------MSDDSASTMYIPLQ------EEEADYN-ACVLSLRDYVQKNNFHKV 295 +S+D + P++ EEE AC L D++++NN Sbjct: 295 VNPYPRVTVDFALSVSEDLLEPVSEPVEWTYHRPEEEISLGPACW--LWDFLRRNNQAGF 352 Query: 296 IIGLSGGIDSALCAAI-------AVDALGKENVQ-------------------------- 322 + LSGG+DSA A + +A+ N Q Sbjct: 353 FLPLSGGVDSAASACVVYSMCCLVCEAVKSGNQQVLTDVQNLVDESSYTPQDPRELCGRL 412 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALGCKY----------DVLPIHDLVNHFFSLMSQFL 370 T + + +S ++ A A+ +G + +L I LV F S Sbjct: 413 LTTCYMASENSSQETHNRATELAQQIGSYHISLNIDPAVKAILGIFSLVTGKFPRFSAHG 472 Query: 371 QEEPSGIVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGDM 422 + +N+Q+RIR + LS S+ ++L ++N E +GY T Y Sbjct: 473 GSSRENLALQNVQARIRMVLAYLFAQLSLWSRGARGSLLVLGSANVDESLLGYLTKYDCS 532 Query: 423 SGGFNPLKDLYKTQV---FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 S NP+ + KT + QL + R + + + P+ E P A+ + Q D Sbjct: 533 SADINPIGGISKTDLRAFVQLCAERFQLPVLQAI-----LSAPATAELEPLADGQVSQMD 587 Query: 480 QESL 483 +E + Sbjct: 588 EEDM 591 >gi|114320600|ref|YP_742283.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Alkalilimnicola ehrlichii MLHE-1] gi|114226994|gb|ABI56793.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Alkalilimnicola ehrlichii MLHE-1] Length = 294 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 34/257 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q D N+ + A EA +G L+L EL Y F + Sbjct: 1 MAPLRVALVQQR-CGPDPDDNLHRTLTAIAEAAGRGAGLVLLQELHRGRY------FCQQ 53 Query: 62 FIQACSSAIDTLKSDTHD--GGAG-----IVVG--FPRQDQEGVLNSVVILDAGNIIAVR 112 AC + + T D G A +VVG F R+ N+ V+LDA +A R Sbjct: 54 EDPACFDQAEPVPGPTTDALGTAAREHGVVVVGSVFERRAPGLYHNTAVVLDADGSLAGR 113 Query: 113 -DKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K+++P+ ++EK F G +P+ R RLG+L+C D W + + GAE Sbjct: 114 YRKMHIPDDPGYYEKFYFTPGDLGFEPVQTRVGRLGVLVCWDQW-FPEAARLMALAGAEV 172 Query: 171 LFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LI 215 L A + + + ++R + Q H LP++ N+ G + + + Sbjct: 173 LLYPTAIGWTPDDRPDEQARQREAWMLAQRGHAVSNGLPVLACNRTGEEPDPEHPDQGIR 232 Query: 216 FDGASFCFDGQQQLAFQ 232 F G SF Q ++ Q Sbjct: 233 FWGGSFVCGPQGEILAQ 249 >gi|290893755|ref|ZP_06556735.1| hydrolase [Listeria monocytogenes FSL J2-071] gi|290556704|gb|EFD90238.1| hydrolase [Listeria monocytogenes FSL J2-071] Length = 296 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 24/206 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I A S+ + TLK + GI + + ++ N+ +I+D Sbjct: 61 PLATGFGAERFKWLNEAIAADSAYVSTLKKLAKELQIGICATYLSKTEQRTQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESTRVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR 187 +GAE + NA +P N+L R Sbjct: 177 LKGAEIILVPNACDINPARLNQLNSR 202 >gi|82776818|ref|YP_403167.1| NAD synthetase [Shigella dysenteriae Sd197] gi|309788807|ref|ZP_07683402.1| NAD+ synthetase [Shigella dysenteriae 1617] gi|123562655|sp|Q32G79|NADE_SHIDS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|81240966|gb|ABB61676.1| NAD synthetase [Shigella dysenteriae Sd197] gi|308923078|gb|EFP68590.1| NAD+ synthetase [Shigella dysenteriae 1617] Length = 275 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D+++ + +N + ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVVLGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNVPEQVARTIENWYLKTEHKRR 263 >gi|302384364|ref|YP_003820187.1| N-carbamoylputrescine amidase [Brevundimonas subvibrioides ATCC 15264] gi|302194992|gb|ADL02564.1| N-carbamoylputrescine amidase [Brevundimonas subvibrioides ATCC 15264] Length = 289 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 28/244 (11%) Query: 7 IAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSF 62 I++A L G D+A NIA+ A +G +IL +ELF Y E+ F ++ Sbjct: 5 ISVAALQSAYGEDMAANIARTADLVRGAAGKGAQVILPSELFQGPYFCVSQEEKWFGTAY 64 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 A+ + + G I V ++ NS+V+LDA G+ + V K ++P+ Sbjct: 65 AWREHPAVIAMADLAKELGVAIPVSIFEREGPHYFNSIVMLDADGSAMGVYRKSHIPDGP 124 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNAS 177 + EK F G + + R R+G+ IC D W + + GAE L ++ + Sbjct: 125 GYQEKYYFRPGDTGFKVWDTRFGRIGVGICWDQW-YPETARAMMLMGAEILMYPTAIGSE 183 Query: 178 PYYHNKL-----KKRHEIVTGQISHVHLPIIYVNQVG-------GQDELIFDGASFCFDG 225 P H+K R + +S+V +P++ N+ G GQ +F G+SF D Sbjct: 184 P--HDKELDTADPWRRAMQGHAVSNV-VPVVGANRTGREHVTEAGQ---LFYGSSFIADH 237 Query: 226 QQQL 229 + L Sbjct: 238 RGDL 241 >gi|197337839|ref|YP_002158160.1| NAD+ synthetase [Vibrio fischeri MJ11] gi|238689988|sp|B5ETZ2|NADE_VIBFM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|197315091|gb|ACH64540.1| NAD+ synthetase [Vibrio fischeri MJ11] Length = 276 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 44/234 (18%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSPQSLEDAAACAK- 344 +I+G+SGG+DS C +A A+ + N++T + LPY Q ED A A Sbjct: 40 LILGISGGVDSTTCGRLAQLAVNELNLETQSSDYQFIAVRLPYGI---QQDEDEAQLALQ 96 Query: 345 --------ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H NH + L + + I V N+++R R + Sbjct: 97 FIQPTHSISINIKDGVDGLHS-ANHIALQDTGLLPTDSAKIDFVKGNVKARARMIAQYEV 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV ++A+ + Sbjct: 156 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVREVAAQLGA-------- 207 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDII--KRIVENEES 502 P +++K P+A EL P + D+++L Y +DD + K+I + E+ Sbjct: 208 ------PEQLVKKVPTADLEELAPQKADEDALSVSYDQIDDFLEGKKIDADAEA 255 >gi|170695557|ref|ZP_02886701.1| NAD+ synthetase [Burkholderia graminis C4D1M] gi|170139544|gb|EDT07728.1| NAD+ synthetase [Burkholderia graminis C4D1M] Length = 286 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 38/231 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQS 335 L +Y++ N ++G+SGG+DS A +AV+ L EN I LP+ Sbjct: 36 LANYLRSNGLKTYVLGISGGVDSTTAGRLAQLAVERLRAENYDARFVAIRLPHG-----E 90 Query: 336 LEDAAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 +D A +AL D+ P D ++ F E V NI++R R Sbjct: 91 QKDEADAQQALAFIRADETLTIDIKPAADAMLASLHQSGLPFADEAQEDFVHGNIKARQR 150 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A+++ +++ T + +E +G+ T +GD PL L K +V Sbjct: 151 MIAQYAVASTRTGVVIGTDHAAESLMGFFTKFGDGGADVLPLAGLNKRRV---------R 201 Query: 448 GITSGLG---PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 + LG L +P + LE LRP + D+++ PY +DD ++ Sbjct: 202 AVAKALGASDALAHKVPTADLEA-----LRPQRPDEDAYGVPYETIDDFLE 247 >gi|322418112|ref|YP_004197335.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M18] gi|320124499|gb|ADW12059.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M18] Length = 259 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 18/226 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K +K A Q N +GDI N+A + ++QG++L + E++ G+ +L Sbjct: 1 MQKGIKAAALQFNIALGDIDTNLAYVTGKLRQLSQQGVELAVLPEMWGCGFAYREL---N 57 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Q ++ L+ + + IV P E V N+ ++D G + K++L + Sbjct: 58 RLAQHTPQLVEKLQGLSAELSMTIVGSLPEPHGEKVFNTAYVVDRGKLAGSYRKMHL--F 115 Query: 121 SEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 E R G D + D +LG++IC D+ + + + L GA+ + A Sbjct: 116 GLMGEDRHLDRG---DSVCLLDTSVGKLGVMICYDL-RFPELARRLAVDGADII----AV 167 Query: 178 PYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 P K ++ H ++ + L ++ N G +L F G+S Sbjct: 168 PGEWPKPREEHWRTLIRARAIENQLFVVAANTCGVIGKLDFFGSSL 213 >gi|196038598|ref|ZP_03105906.1| hydrolase, carbon-nitrogen family [Bacillus cereus NVH0597-99] gi|196030321|gb|EDX68920.1| hydrolase, carbon-nitrogen family [Bacillus cereus NVH0597-99] Length = 259 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + K Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADKDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|167035914|ref|YP_001671145.1| NAD synthetase [Pseudomonas putida GB-1] gi|189083401|sp|B0KKX4|NADE_PSEPG RecName: Full=NH(3)-dependent NAD(+) synthetase gi|166862402|gb|ABZ00810.1| NAD+ synthetase [Pseudomonas putida GB-1] Length = 275 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 35/227 (15%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 EA+ V ++ + +++G+SGG+DS A +A A+ + +T Sbjct: 25 EAEVARRVTFIKGCLANARLKTLVLGISGGVDSLTAALLAQRAINELRAETGDKAYTFIA 84 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE---PSGI--V 378 + LPY+ + DA AC + K D + D+ +L ++ ++ + P+ + V Sbjct: 85 VRLPYQVQHDE--HDAQACLDVI--KADEVHTVDIAPAVRALAAEVVELKNGSPTLVDFV 140 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 N+++R R ++ +++ T + +E +G+ T +GD + PL L K QV Sbjct: 141 VGNVKARTRMVAQYTIAGARAGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVR 200 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 +A S G P S++EK P+A +L P + D+ S Sbjct: 201 AIA---RSFG-----------APESLVEKVPTADLEDLEPGKPDEAS 233 >gi|326802926|ref|YP_004320744.1| NAD+ synthase [Aerococcus urinae ACS-120-V-Col10a] gi|326650028|gb|AEA00211.1| NAD+ synthase [Aerococcus urinae ACS-120-V-Col10a] Length = 276 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 46/263 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT----------IMLPY-KY 330 + DY+++ F K +++G+SGG DS L + A+ K+ QT + LPY + Sbjct: 31 ITDYLKRYPFLKTLVLGISGGQDSTLAGKLCQMAI-KQIRQTTQDQAYQFIAVTLPYGQQ 89 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + Q ++DA A + DV + +L L E S NI++R R + Sbjct: 90 SDAQDVKDALAFIQPDQV-LDVNIKGPVDQQVTALAEAGL--ELSDFNKGNIKARQRMVV 146 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +++ T + +E G+ T +GD + PL L K Q QL N Sbjct: 147 QYAIAGQCSGVVVGTDHAAEAVTGFYTKFGDGASDIVPLWRLNKRQGKQLLKALNC---- 202 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINN 506 PP + +K P+A+L RP D+E+L Y +DD ++ Sbjct: 203 ----------PPHLYDKVPTADLEDDRPQLPDEEALGVSYQAIDDYLE------------ 240 Query: 507 DQEYNDETVRYVEHLLYGSEYKR 529 Q+ +D+ + +E+ S++KR Sbjct: 241 GQDVSDQDAQTIENWYQKSQHKR 263 >gi|196229287|ref|ZP_03128152.1| NAD+ synthetase [Chthoniobacter flavus Ellin428] gi|196226519|gb|EDY21024.1| NAD+ synthetase [Chthoniobacter flavus Ellin428] Length = 270 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 20/243 (8%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 +++ LSGG+DS + A +AV G V P E+AA A+ LG +Y L Sbjct: 1 MLVFLSGGVDSDVVARLAVATFGAARVVGATCLQAAQDPAHPENAARLARTLGIEYAQLN 60 Query: 355 IHDL----VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + + +F E ++ + +R +I AL + +L N++E Sbjct: 61 LGQMPAELAAELARASPRFDDGENGWLIEARAKCALRTSI-AALYHDRGYYILGCGNRTE 119 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 + +G+ GD P+ L+KT+V+ LA LG ++VI E+ PS Sbjct: 120 LRLGFFMPLGDGICHAAPILHLFKTEVYVLA---------QALGTDSQVI-----EQPPS 165 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 A P Q+D E + + + I R V E I + E + + EY+R Sbjct: 166 AGFWPGQSDLEDIAYWMLHGGPIVRPVHFSEEDI-AEVERMRRVLSFAGLDAALKEYERG 224 Query: 531 QAP 533 AP Sbjct: 225 SAP 227 >gi|49484154|ref|YP_041378.1| NAD synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257426045|ref|ZP_05602467.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428718|ref|ZP_05605113.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431328|ref|ZP_05607704.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257434046|ref|ZP_05610397.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257436950|ref|ZP_05612992.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus M876] gi|282904544|ref|ZP_06312429.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus C160] gi|282906317|ref|ZP_06314169.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282909233|ref|ZP_06317049.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911538|ref|ZP_06319338.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914711|ref|ZP_06322496.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus subsp. aureus M899] gi|282919748|ref|ZP_06327480.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus C427] gi|282925152|ref|ZP_06332812.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus C101] gi|283958674|ref|ZP_06376120.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus A017934/97] gi|293507788|ref|ZP_06667630.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293510290|ref|ZP_06668996.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus M809] gi|293539345|ref|ZP_06672024.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus subsp. aureus M1015] gi|295428495|ref|ZP_06821122.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|56749223|sp|Q6GFE4|NADE_STAAR RecName: Full=NH(3)-dependent NAD(+) synthetase gi|49242283|emb|CAG40990.1| putative NAD synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257271188|gb|EEV03345.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257274362|gb|EEV05874.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257277977|gb|EEV08633.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257280972|gb|EEV11116.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257283739|gb|EEV13864.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus M876] gi|282313110|gb|EFB43508.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus C101] gi|282316386|gb|EFB46763.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus C427] gi|282321425|gb|EFB51751.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus subsp. aureus M899] gi|282324547|gb|EFB54859.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282326801|gb|EFB57098.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330514|gb|EFB60031.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282595100|gb|EFC00067.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus C160] gi|283789714|gb|EFC28536.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus A017934/97] gi|290919880|gb|EFD96949.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus subsp. aureus M1015] gi|291094851|gb|EFE25119.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291466654|gb|EFF09174.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus M809] gi|295127477|gb|EFG57116.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|315193443|gb|EFU23840.1| NAD synthetase [Staphylococcus aureus subsp. aureus CGS00] Length = 273 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 ++ YVQ ++F K +++G+SGG DS L + +V+ L +E + + LPY Sbjct: 31 IKSYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVEQALQF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKQLYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|15679799|ref|NP_276917.1| N-carbamoyl-D-amino acid amidohydrolase [Methanothermobacter thermautotrophicus str. Delta H] gi|2622943|gb|AAB86277.1| N-carbamoyl-D-amino acid amidohydrolase [Methanothermobacter thermautotrophicus str. Delta H] Length = 272 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 19/203 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-VFKKSFI 63 +++ I Q+ V D N+ A EA +G LI+ E+F P D+ +F + Sbjct: 1 MRLGICQMQ-VTEDKEKNVGTAVEMIVEAAERGARLIVLPEMFTC---PYDVNLFSEYAE 56 Query: 64 QACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLN-SVVILDAGNIIAVRDK-----IN 116 +I T++S + G +V G P + EG+ N S V+ D GNII K IN Sbjct: 57 DENGYSIRTMRSIARELGIHLVAGSIPEETPEGIYNTSFVMDDGGNIIGKHRKVHLFDIN 116 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL----- 171 +P F E + I+G S I +G+ IC D+ + + + + GAE L Sbjct: 117 VPGEISFRESDSLIAGDSVTVIETPQCVMGVGICYDM-RFPELSRMMALGGAEVLIFPGA 175 Query: 172 FSLNASPYYHNKLKKRHEIVTGQ 194 F++ P H +L R + Q Sbjct: 176 FNMTTGP-AHWRLLVRSRALDNQ 197 >gi|323140847|ref|ZP_08075760.1| N-carbamoylputrescine amidase [Phascolarctobacterium sp. YIT 12067] gi|322414585|gb|EFY05391.1| N-carbamoylputrescine amidase [Phascolarctobacterium sp. YIT 12067] Length = 292 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 23/249 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VF 58 + K+K+A Q+ + N+ A EA G ++L EL+ Y + + Sbjct: 1 MSKVKVAAVQMR-CAPTVEENLQHAEALVREAAANGAQIVLLPELWERPYFCQQRRYDFY 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + + + A+ K + + + F +D + NS+ +DA G I+ V K ++ Sbjct: 60 QYALPTEENPAVQMGKRLAKELNIVLPISFFERDVNELYNSIACIDADGEILGVYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G S + R+GI IC D W + L GAE LF + Sbjct: 120 PDDHFYQEKFYFKPGNSGFTVFNTKYGRVGIGICWDQW-FPETARCLALNGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQVG------------GQDELIFDGAS 220 + + P + + ++ G + +P++ N++G Q L+F G+S Sbjct: 179 IGSEPILDCDSMPHWRRVMQGHSAANLMPVVAANRIGLETVEPCEGNAGQQSSLLFYGSS 238 Query: 221 FCFDGQQQL 229 F DG L Sbjct: 239 FMTDGTGAL 247 >gi|224418970|ref|ZP_03656976.1| hypothetical protein HcanM9_06800 [Helicobacter canadensis MIT 98-5491] gi|253827918|ref|ZP_04870803.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313142482|ref|ZP_07804675.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511324|gb|EES89983.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313131513|gb|EFR49130.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 293 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 34/285 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF- 58 ++ +K+A+ Q G + + +EA + G +L+L EL + Y E++ F Sbjct: 1 MQNIKVALIQ-QAFKGTKTATLQTTAKMIKEAAKNGANLVLLQELHTTEYFCQSENVDFF 59 Query: 59 --KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 SF + C + K+ + F R+ + N+ V+ ++ G I K+ Sbjct: 60 DYALSFEEDCEYFSEIAKNHKI---VLVTSLFERRTRGLYHNTAVVFESNGEIAGKYRKM 116 Query: 116 NLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 ++P+ F+EK F G PI ++GILIC D W + + +GAE L Sbjct: 117 HIPDDPGFYEKFYFTPGDLGFTPITTSLGKVGILICWDQW-YPEAARSMALKGAEILIYP 175 Query: 175 NASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGA 219 A ++ K ++R + Q H +P++ +N+VG + + + F G+ Sbjct: 176 TAIGWFDSDSKEEKDRQREAWIAVQRGHSVANGIPVVAINRVGFEKDKSGVLEGIRFWGS 235 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 SF F Q +L +E+ EW D++ S+ W ++ D Sbjct: 236 SFAFGAQGELLTLGSVENEEILYFEW--DKKRSEEVRRIWPFLRD 278 >gi|295135649|ref|YP_003586325.1| NH(3)-dependent NAD(+) synthetase [Zunongwangia profunda SM-A87] gi|294983664|gb|ADF54129.1| NH(3)-dependent NAD(+) synthetase [Zunongwangia profunda SM-A87] Length = 263 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 15/168 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+DY + + ++G+SGGIDSA+ + + A NV + +P + P + A Sbjct: 14 LKDYAKNAKMNGFVVGVSGGIDSAVTSTLC--AKTGMNVLVLEMPI-HQDPSHVSRAQKH 70 Query: 343 AKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +L ++ D+ P+ D +F + + + N ++R+R L Sbjct: 71 IASLKERFSNVSSERVDLTPVFD---NFRDALPNVEESANVDLSLANSRARLRMTTLYYF 127 Query: 395 SNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 + K ++ T NK E VG+ T YGD +P+ DL K++V+ L Sbjct: 128 AGLHKYLVGGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVYALG 175 >gi|242061844|ref|XP_002452211.1| hypothetical protein SORBIDRAFT_04g021790 [Sorghum bicolor] gi|241932042|gb|EES05187.1| hypothetical protein SORBIDRAFT_04g021790 [Sorghum bicolor] Length = 298 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 20/235 (8%) Query: 6 KIAIAQLNPVVGDI-AGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VFKKS 61 K+A+A + D+ A N+A A R EA+++G ++L ELF Y + F+++ Sbjct: 8 KVAVAAVQFACTDVEAENVATAERLIREAHKKGAKIVLIQELFEGHYFCQAQRMDFFRRA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 + I ++ + I V F + NSV I+DA G + + K ++P+ Sbjct: 68 KPYKGNPTIIRMQQLAKELEVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRKSHIPDG 127 Query: 121 SEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNA 176 + EK F G + + +G+ IC D W + + QGAE LF ++ + Sbjct: 128 PGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQW-FPECARAMALQGAEILFYPTAIGS 186 Query: 177 SPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 P N + H ++ G +P++ N++G G+ + F G SF Sbjct: 187 EPQDGNLDSREHWKRVMQGHAGANLVPLVASNRIGRETVETEHGKSTITFYGNSF 241 >gi|223044032|ref|ZP_03614072.1| NAD+ synthetase [Staphylococcus capitis SK14] gi|222442575|gb|EEE48680.1| NAD+ synthetase [Staphylococcus capitis SK14] Length = 273 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 40/240 (16%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TI 324 E + N ++ YVQ ++F K +++G+SGG DS L I AV+ L E + + Sbjct: 21 EKEVNEIKHFIKSYVQSHSFIKSLVLGISGGQDSTLTGKIVQLAVNELRSEGRECKFIAV 80 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ 383 LPY +DA AL + P ++ + + Q +Q + +GI + Q Sbjct: 81 KLPYGVQ-----KDADEVEDALQF---IEPDETVIVNIKPAVDQSVQSLKEAGIELTDFQ 132 Query: 384 -----SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 +R R + +++++ +++ T + +E G+ T YGD + P+ L K Q Sbjct: 133 RGNEKARERMKVQFSIASNQSGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLDKRQGK 192 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 QL + N+ P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 193 QLLKYLNA--------------PKHLYEKVPTADLEDDKPQLPDEEALGVTYDQIDDYLE 238 >gi|168005941|ref|XP_001755668.1| predicted protein [Physcomitrella patens subsp. patens] gi|162692987|gb|EDQ79341.1| predicted protein [Physcomitrella patens subsp. patens] Length = 296 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 21/223 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSFIQACSSAIDTLK 74 D+ N++KA +A+ QG +++L ELF Y + F +S + I+ ++ Sbjct: 19 DVESNVSKAETLVRDAHAQGANIVLIQELFEGYYFCQAQREDYFARSHPREGHPTIERMQ 78 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGY 133 + G I V F + NS+V++DA G + V K ++P+ + EK F G Sbjct: 79 RLAKELGVVIPVSFFEEANNAHYNSIVVIDADGTDLGVYRKSHIPDGPGYQEKFYFNPGD 138 Query: 134 SNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRH 188 + VF+ +G+ IC D W + + GAE LF ++ + P + H Sbjct: 139 TGFK-VFKTKFATIGVGICWDQW-FPEAARAMALMGAEVLFYPTAIGSEPQDGDLDSSEH 196 Query: 189 --EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 ++ G +P++ N++G G ++ F G SF Sbjct: 197 WRRVMQGHAGANLVPLVASNRIGQEIIETERGPSKIAFYGTSF 239 >gi|309378853|emb|CBX22558.1| putative NH(3)-dependent NAD+ synthetase NadE [Neisseria lactamica Y92-1009] Length = 263 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N +IG+SGGIDSA+ + +A + T++L P + P LE A Sbjct: 14 LDEYATQANAKGFVIGVSGGIDSAVVSTLAA----RTGRTTLLLDMPIR-QHPGQLERAR 68 Query: 341 ACAKALGCKYDVLPIH--DLVNHFFS------LMSQFLQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F S + +P + N +SR+R L Sbjct: 69 LHIRNLQGQYANVSAQTVDLTDTFQSFEQTVGIHQTAFDNQPLSLA--NARSRLRMLTLY 126 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 127 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 176 >gi|170290570|ref|YP_001737386.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174650|gb|ACB07703.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Candidatus Korarchaeum cryptofilum OPF8] Length = 265 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 21/174 (12%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++ Q NP G + N+ +RA + A++ DL++F ELF +GY L + Sbjct: 3 RVGFVQTNPEFGAVESNL---KRALDLASKVESDLLVFPELFNTGY----LFLSREEALK 55 Query: 66 CSSAID--TLK--SD-THDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 S +D T+K SD + IV GFP +D V NS V +D G++ V K +L Sbjct: 56 LSEGLDGPTIKRLSDFASEHSTAIVAGFPERDGGKVYNSAVAIDIDGDVKGVYRKTHL-- 113 Query: 120 YSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+E++ VF +R+GI+IC D W + L GA+ + Sbjct: 114 ---FYEEKLIFDPGDTGFRVFDLAGMRVGIMICFD-WVFPESARSLALSGAQII 163 >gi|260754036|ref|YP_003226929.1| N-carbamoylputrescine amidase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553399|gb|ACV76345.1| N-carbamoylputrescine amidase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 282 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 14/239 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 + ++ +A QL + DI NI + EEA QG +IL ELF Y ++ F Sbjct: 1 MTEITVAALQLA-LTDDIQTNIDRVSVLVEEAAAQGAKIILPPELFEGHYFCATEDESCF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 ++ + ++ I F D NS+ ++++ G I+ V K ++ Sbjct: 60 ARAKPVEEHPVVLAMQKLAKRLNVTIPTSFFESDPPHYYNSLAMINSDGEIMGVYRKSHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ + EK F G S + I++G+ IC D W + + GAE LF A Sbjct: 120 PDGPGYEEKFYFRPGNSGFKVWDCGGIKIGVGICWDQWY-PETARAMMLMGAELLFFPTA 178 Query: 177 ------SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 P R ++ +S+V +P+I N++G + L F G SF D + L Sbjct: 179 IGNEPHDPDLDTSRLWRRAMIGHAVSNV-VPVIASNRIGQEATLSFYGHSFIADQRGDL 236 >gi|288575675|ref|ZP_05977408.2| NAD+ synthetase [Neisseria mucosa ATCC 25996] gi|288567467|gb|EFC89027.1| NAD+ synthetase [Neisseria mucosa ATCC 25996] Length = 337 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 18/171 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ-------- 334 L++Y + ++G+SGGIDSA+ +AIA A V + +P + + Q Sbjct: 88 LKNYATTAHAKGFVVGVSGGIDSAVVSAIA--ARTGLKVLLLEMPIRQKADQVSRAQEHI 145 Query: 335 -SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILM 392 LE A G D+ P D F + + E P+ +A N +SR+R L Sbjct: 146 RRLEQA--FPNVSGISVDLTPTFDT---FAADVEVDETEFPAKQLALANARSRLRMLTLY 200 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 + ++ T NK E VG+ T YGD +P+ DL KTQ++Q+A+ Sbjct: 201 YYGQINGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQIYQIAA 251 >gi|221212872|ref|ZP_03585848.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans CGD1] gi|221167085|gb|EED99555.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans CGD1] Length = 281 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 60/279 (21%), Positives = 111/279 (39%), Gaps = 21/279 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKKSFI 63 +++ +AQL+ + GD+A N K A + G LI+F E +SG+P V Sbjct: 1 MQVELAQLSLIDGDVAHNTHKVIDAIARVDVAGGTKLIVFPETTLSGFPTRQNV--ADVA 58 Query: 64 QACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 Q A+ ++ G + VG +D + N+ V++D IA+R Y + Sbjct: 59 QPLDGRALSAVRDAARQKGVAVAVGLAERDGDRFYNTTVLVDEQGDIALR-------YRK 111 Query: 123 FH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 H + F G + + +G+LIC DI + + + A+ L N + Sbjct: 112 THLWASDVGVFAPGDRFATCRWNGLTVGVLICYDI-EFPETARAIGSLDADLLIVTNGNM 170 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFD--GQQQLAFQMKH 235 + +R + + + + VN+ G G D+L F G S D G L + Sbjct: 171 DPFGPVHRRA--IAARAMENQMFALMVNRCGTGDDDLTFAGLSALVDPFGDTVLELGREE 228 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEA 274 + + + +NY+ D +P+++ + Sbjct: 229 AIARTRIDPTRLEASREHYNYLHDARVPLGLVPIEQPDG 267 >gi|241759794|ref|ZP_04757894.1| NAD+ synthetase [Neisseria flavescens SK114] gi|241319802|gb|EER56198.1| NAD+ synthetase [Neisseria flavescens SK114] Length = 262 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 10/167 (5%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+DY ++ ++G+SGGIDSA+ + +A A +V + +P + S Q + A Sbjct: 14 LKDYAEQARAKGFVVGVSGGIDSAVVSTLA--AQTGLSVLLLEMPIRQKSDQ-VNRAQEH 70 Query: 343 AKALGCKYDVLPIH--DLVNHFFSLMSQFLQEE---PSGIVA-ENIQSRIRGNILMALSN 396 L +Y + DL F + E P+ +A N +SR+R L Sbjct: 71 MGRLKQRYPNVKAQSVDLTQTFDTFADTVDVSETEFPNKQLALANARSRLRMTTLYYYGQ 130 Query: 397 HSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++ T NK E VG+ T YGD +P+ DL KTQV+ LA+ Sbjct: 131 LHGLLVAGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYALAA 177 >gi|297590033|ref|ZP_06948673.1| NAD(+) synthase [Staphylococcus aureus subsp. aureus MN8] gi|297577161|gb|EFH95875.1| NAD(+) synthase [Staphylococcus aureus subsp. aureus MN8] gi|312437620|gb|ADQ76691.1| NAD+ synthetase [Staphylococcus aureus subsp. aureus TCH60] Length = 281 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 ++ YVQ ++F K +++G+SGG DS L + +V+ L +E + + LPY Sbjct: 39 IKSYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQ--- 95 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 96 --KDADEVEQALQF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 150 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 151 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 205 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 206 ----LGA-----PKQLYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQK 256 Query: 503 FINN 506 I N Sbjct: 257 VIEN 260 >gi|325140416|gb|EGC62937.1| NAD+ synthetase [Neisseria meningitidis CU385] gi|325200015|gb|ADY95470.1| NAD+ synthetase [Neisseria meningitidis H44/76] Length = 272 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 23 LDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRPTLLLDMPIR-QHPGQLERAR 77 Query: 341 ACAKALGCKYDVLPIH--DLVNHFFSLMSQF------LQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 78 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGAHQTAFDSQPLSLA--NARSRLRMLTLY 135 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 136 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 185 >gi|296115905|ref|ZP_06834528.1| N-carbamyl-D-amino acid amidohydrolase [Gluconacetobacter hansenii ATCC 23769] gi|295977477|gb|EFG84232.1| N-carbamyl-D-amino acid amidohydrolase [Gluconacetobacter hansenii ATCC 23769] Length = 315 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 33/252 (13%) Query: 31 EEANRQGMDLILFTELFISGYPPEDL----VFKKSF-IQACSSAIDTLKSDTHDGGAGIV 85 E+A +QG L++F EL + + P L V + F S + L + G G Sbjct: 33 EKAAQQGATLVVFPELAFTTFFPRMLLDGSVLAEYFEAHIPSDTTERLFKRARELGVGFY 92 Query: 86 VGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNY------SEFH--EKRTFISGYSN 135 VG+ Q EG S+++ G II KI+LP S F EKR F G + Sbjct: 93 VGYAEQTPEGQRFNTSILVAPTGEIIGKYRKIHLPGSVEPRPNSRFQQLEKRYFEYGDTG 152 Query: 136 DPI-----VFRDIRLGILICED-IWKNSNICKHLKKQGAEFL-FSLNASPYYHN------ 182 P+ + D R+G+LIC D W + C L QG E L N++ Y N Sbjct: 153 FPVFQGPQAWEDARIGMLICNDRRWPEAWRC--LALQGMELLCVGYNSAAYDPNGGNSES 210 Query: 183 -KLKKRHEI--VTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +L+ H + V G + V + G +D G S D + Q ++ Sbjct: 211 PELRTFHALLAVQGNAYMNACWAVAVAKAGVEDGAALIGGSCIVDPNGVIVAQASTLEDE 270 Query: 240 NFMTEWHYDQQL 251 + + D L Sbjct: 271 VLVADCDLDMCL 282 >gi|261392361|emb|CAX49901.1| NH(3)-dependent NAD(+) synthetase [Neisseria meningitidis 8013] gi|325205868|gb|ADZ01321.1| NAD+ synthetase [Neisseria meningitidis M04-240196] Length = 273 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 24 LDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRPTLLLDMPIR-QHPGQLERAR 78 Query: 341 ACAKALGCKYDVLPIH--DLVNHFFSLMSQF------LQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 79 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGAHQTAFDSQPLSLA--NARSRLRMLTLY 136 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 137 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|82751570|ref|YP_417311.1| NAD synthetase [Staphylococcus aureus RF122] gi|123548128|sp|Q2YU60|NADE_STAAB RecName: Full=NH(3)-dependent NAD(+) synthetase gi|82657101|emb|CAI81538.1| probable NAD synthetase [Staphylococcus aureus RF122] gi|302333578|gb|ADL23771.1| NH(3)-dependent NAD+ synthetase [Staphylococcus aureus subsp. aureus JKD6159] Length = 273 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 +++YVQ ++F K +++G+SGG DS L + +V+ L +E + + LPY Sbjct: 31 IKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVEQALRF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVSPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|323344165|ref|ZP_08084391.1| para-aminobenzoate synthase [Prevotella oralis ATCC 33269] gi|323094894|gb|EFZ37469.1| para-aminobenzoate synthase [Prevotella oralis ATCC 33269] Length = 294 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 20/176 (11%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+LD G+I K+++P+ ++EK F G PI RLG+L+C D W Sbjct: 99 NTAVVLDTDGSIAGKYRKMHIPDDPAYYEKFYFTPGDIGFHPIETSIGRLGVLVCWDQWY 158 Query: 156 NSNICKHLKKQGAEFLFSLNASPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GAE L A Y + ++R Q H LP++ VN+ Sbjct: 159 -PEAARLMALEGAELLIYPTAIGYESRDTADEQQRQRDAWAIVQRGHAVANGLPVVTVNR 217 Query: 208 VG------GQDELI-FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD--QQLSQW 254 VG GQ E I F G+SF Q +L ++ E + + E D +Q+ +W Sbjct: 218 VGFEHDPSGQTEGIQFWGSSFVAGPQGELYYRASETEEDSAVVEIDLDHGEQVRRW 273 >gi|134295732|ref|YP_001119467.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia vietnamiensis G4] gi|134138889|gb|ABO54632.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia vietnamiensis G4] Length = 281 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 23/265 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 +++ +AQL V D+A N K E A+ G LI+F E +SG+P + V Sbjct: 1 MQVELAQLTLVDADVAHNTRKVLDTIERADTAAGTRLIVFPETTLSGFPTRENV--ADVA 58 Query: 64 QACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 Q A+ ++ G + VG +D E N+ V++D G+I+ +Y Sbjct: 59 QTLDGPALSAVRDAARRKGVAVAVGLAERDGERFYNTTVLVDEQGDIVL--------HYR 110 Query: 122 EFH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + H + F G V+ + +G+LIC DI + + + A+ L N + Sbjct: 111 KTHLWASDVGVFTPGERFATCVWNGLTVGLLICYDI-EFPETARAIGTLDADLLIVTNGN 169 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFD--GQQQLAFQMK 234 + +R + + + + VN+ G G D+L F G S D G L Sbjct: 170 MDPFGPVHRR--AIVARAMENQMFALMVNRCGSGDDDLTFAGLSALVDPFGDTVLELGRD 227 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSD 259 Q + + +NY+ D Sbjct: 228 EAIVQARIDPTRLEASREHYNYLHD 252 >gi|260438733|ref|ZP_05792549.1| N-carbamoylputrescine amidase [Butyrivibrio crossotus DSM 2876] gi|292808859|gb|EFF68064.1| N-carbamoylputrescine amidase [Butyrivibrio crossotus DSM 2876] Length = 290 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 61/282 (21%), Positives = 121/282 (42%), Gaps = 27/282 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK- 60 ++K+ +A Q+ ++ NI A R A +G ++IL ELF Y ++ ++ Sbjct: 1 MRKVCVASIQMK-CSREVNENILTADRLVRTAAEKGAEIILLPELFERQYFCQERRYEYY 59 Query: 61 SFIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F + + A+ + + + + +D + N+VV+LD G I+ + K ++P Sbjct: 60 GFAKPVEDNDAVKHFLPVSEELNIVLPLSIYEKDGNVLYNTVVVLDCGKILGIYRKTHIP 119 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 + + EK F G + + F+ ++GI IC D W + L GAE LF + Sbjct: 120 DDHFYQEKFYFTPG-NTGFVTFKTTYGQIGIGICWDQW-FPETARCLTLNGAELLFYPTA 177 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQVGGQD------------ELIFDGAS 220 + + P + + +K ++ G + +P+I N+ G ++ L F G+ Sbjct: 178 IGSEPILNCDSMKHWRNVMKGHAAANIIPVIAANRYGLEEVTPCDANGNQSSSLEFYGSG 237 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLS---QWNYMSD 259 F D +L + + + E+ D+ + +W D Sbjct: 238 FITDATGELLCESGRKGDDIILQEFDLDEIAAMRLEWGLFRD 279 >gi|254670542|emb|CBA06371.1| NH(3)-dependent NAD+ synthetase [Neisseria meningitidis alpha153] Length = 263 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 18/173 (10%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLE 337 V L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE Sbjct: 11 VRWLDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRPTLLLDMPIR-QHPGQLE 65 Query: 338 DAAACAKALGCKYDVLPIH--DLVNHFFSLMSQF------LQEEPSGIVAENIQSRIRGN 389 A + L +Y + DL + F + +P + N +SR+R Sbjct: 66 RARLHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGAHQTAFDSQPLSLA--NARSRLRML 123 Query: 390 ILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 L ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 124 TLYYYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 176 >gi|228902545|ref|ZP_04066696.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis IBL 4222] gi|228856986|gb|EEN01495.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis IBL 4222] Length = 280 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 15/227 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY DL Sbjct: 20 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGY---DLARLSEI 76 Query: 63 IQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 A ++T LK + G IV G +Q ++GV N++ +++ G ++ K++L Sbjct: 77 --ADRDGLETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNKEGELVNEYSKVHL 134 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + E + I+G S D+ IC DI + H K G++ LF + Sbjct: 135 --FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GSKVLFVVAEW 191 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L ++ + ++ N+ G F G S D Sbjct: 192 PLV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|332799937|ref|YP_004461436.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Tepidanaerobacter sp. Re1] gi|332697672|gb|AEE92129.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Tepidanaerobacter sp. Re1] Length = 240 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 20/229 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ I Q+ V + N+ K E+A Q +D++ F E+ ++GY E L K+ Sbjct: 1 MKLGICQM-AVSEKLDVNLKKIIEFIEQAAGQNIDIVGFPEMALTGYTVEVLT-NKNMND 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNYSEF 123 S A+ ++ ++G P + + + NS V L GNI K Y Sbjct: 59 MVSEALSQIRETCEGFNTAAIIGHPYKKSDKLYNSTSVFLPCGNIYTYDKK-----YPTN 113 Query: 124 HEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 E F G DP++F ++G +IC D N+ L GA F++ L+A +++ Sbjct: 114 AELEYFEPG-KKDPLIFDYNGKKIGAMICRD-QNYPNLAAELVNGGASFIYILSA--HFY 169 Query: 182 N------KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 N KL+K I + + I+ N +G +I G S D Sbjct: 170 NPKEARWKLEKNRAIPITRAVENGVHILLANFIGSHLGMISLGNSLIAD 218 >gi|308158906|gb|EFO61466.1| NH3-dependent NAD+ synthetase [Giardia lamblia P15] Length = 287 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 54/226 (23%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN---VQTIMLPYKYTSPQSLED 338 +L DY +K I+ LSGGIDSA+ A+ + EN + + L S S+++ Sbjct: 34 ALNDYARKAGIAGCIVNLSGGIDSAVTFALLARSKAMENSPITKVLGLAQPILSTSSIQN 93 Query: 339 AAACAKALG-----CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 A + G C+ D+ F SL S L E+ GI + N++S +R Sbjct: 94 RAYELSSYGEIVTVCQTDI---------FLSLAS--LVEDACGIKGKKFARGNLRSYMRT 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGT------LY-----GDMSGGFNPLKDLYKTQV 437 + + A LL+ + VG G LY GD + DL+K++V Sbjct: 143 PVAFYV-----AQLLSQEGVPSVVVGTGNYDEDGFLYYFSKAGDGVSDIQLIHDLHKSEV 197 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 F + + LG IP SIL PSA+L QTD+E + Sbjct: 198 FAVGKY---------LG-----IPESILYAPPSADLWEGQTDEEEI 229 >gi|209544747|ref|YP_002276976.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209532424|gb|ACI52361.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Gluconacetobacter diazotrophicus PAl 5] Length = 319 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 30/197 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIA-GNIAKARRAREEANRQGMDLILFTELFISGYP------- 52 M + ++ A Q++PV+GD G K R EA +G+ L +F E F+ YP Sbjct: 1 MSRIVRAAAVQISPVLGDDGLGTARKVCRTIREAAEKGVKLAVFPETFVPYYPYFSFIQP 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 E L + + D + + G +V+G +D + N+ VI DA G Sbjct: 61 AFRFGAEHLALYERAVSVPGPVTDMVAEAARETGMVVVLGVNERDHGTLYNAQVIFDATG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN------ 158 I+ R KI P Y HE+ + G + V R+G L C W++ N Sbjct: 121 EIVLKRRKIT-PTY---HERMVWGQGDGSGLTVVDSAAGRIGALAC---WEHYNPLARYA 173 Query: 159 -ICKHLKKQGAEFLFSL 174 + +H + A+F SL Sbjct: 174 LMAQHEEIHCAQFPGSL 190 >gi|282880220|ref|ZP_06288937.1| hydrolase, carbon-nitrogen family [Prevotella timonensis CRIS 5C-B1] gi|281305880|gb|EFA97923.1| hydrolase, carbon-nitrogen family [Prevotella timonensis CRIS 5C-B1] Length = 318 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 20/181 (11%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 +VVI G I K+++P+ ++EK F G PI RLG+L+C D W Sbjct: 123 TAVVIEKDGTIAGKYRKMHIPDDPAYYEKFYFTPGDLGFHPIDTSVGRLGVLVCWDQWY- 181 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQV 208 + + QGA+ L A Y + + ++R+ T Q H LP+I VN+V Sbjct: 182 PEAARLMALQGAQLLIYPTAIGYESSDDEDEQQRQRNAWTTVQRGHAVANGLPVITVNRV 241 Query: 209 GGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMS 258 G +D+ + F G+SF Q +L +Q E++ + + H +Q W ++ Sbjct: 242 GHEDDPSGQTNGIDFWGSSFVAGPQGELYYQACDDDEESVVIDIDLDHSEQVRCWWPFLR 301 Query: 259 D 259 D Sbjct: 302 D 302 >gi|49478501|ref|YP_038095.1| carbon-nitrogen family hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49330057|gb|AAT60703.1| hydrolase, carbon-nitrogen family [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 259 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 21/228 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + K Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADKDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQ----YGVHIVGGSIAKQTKQGVTNTMYVVTNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDI----WKNSNICKHLKKQGAEFLFSLNA 176 E + I+G S D+ IC DI W + K GA+ LF + Sbjct: 115 QLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-----GAKVLFVVAE 169 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L ++ + ++ N+ G F G S D Sbjct: 170 WPLV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|325128446|gb|EGC51327.1| NAD+ synthetase [Neisseria meningitidis N1568] gi|325144501|gb|EGC66800.1| NAD+ synthetase [Neisseria meningitidis M01-240013] Length = 272 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 14/168 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 23 LDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRPTLLLDMPIR-QHPGQLERAR 77 Query: 341 ACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNILMAL 394 + L +Y + + + F Q + + + N +SR+R L Sbjct: 78 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGTHQTAFANQPLSLANARSRLRMLTLYYY 137 Query: 395 SNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 138 GQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 185 >gi|229031676|ref|ZP_04187669.1| Carbon-nitrogen hydrolase [Bacillus cereus AH1271] gi|228729560|gb|EEL80547.1| Carbon-nitrogen hydrolase [Bacillus cereus AH1271] Length = 280 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 15/226 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY DL Sbjct: 21 KMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGY---DLTRLSEI- 76 Query: 64 QACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 A ++T LK + G IV G +Q +GV N++ V+ + G ++ K++L Sbjct: 77 -ADRDGLETKEKLKEWSKQYGVHIVGGSIAKQTDQGVTNTMYVVTNKGQLVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G S +I IC DI + H K GA LF + P Sbjct: 135 -FQLMDEHKYLIAGNSTGEFKLDNIECAGTICYDIRFPEWMRVHTAK-GATVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIID 236 >gi|224131816|ref|XP_002328115.1| predicted protein [Populus trichocarpa] gi|118489609|gb|ABK96606.1| unknown [Populus trichocarpa x Populus deltoides] gi|222837630|gb|EEE75995.1| predicted protein [Populus trichocarpa] Length = 301 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 21/223 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKKSFIQACSSAIDTL 73 D+A N+A A R A+++G ++IL ELF Y ED F+++ I ++ Sbjct: 21 DVAANLATAERLVRAAHKKGSNIILIQELFEGYYFCQAQREDF-FQRAKPYKGHPTILSM 79 Query: 74 KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG 132 + + G I V F + NS+ ++DA G + + K ++P+ + EK F G Sbjct: 80 QKLAKELGVVIPVSFFEEANNAHYNSIAMIDADGADLGLYRKSHIPDGPGYQEKFYFNPG 139 Query: 133 YSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYH--NKLKK 186 + + + ++GI IC D W + + QGAE L ++ + P + L Sbjct: 140 DTGFRVFQTKFAKIGIAICWDQW-FPEAARAMVLQGAEILLYPTAIGSEPQDQGLDSLDH 198 Query: 187 RHEIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 ++ G +P++ N++G G E+ F G SF Sbjct: 199 WKRVMQGHAGANLVPLVASNRIGKEIIQTEHGNSEITFYGNSF 241 >gi|296393697|ref|YP_003658581.1| NAD+ synthetase [Segniliparus rotundus DSM 44985] gi|296180844|gb|ADG97750.1| NAD+ synthetase [Segniliparus rotundus DSM 44985] Length = 282 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 112/274 (40%), Gaps = 47/274 (17%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC------AAIAVDALGKE-NVQT 323 +EE D L+ DY+ + ++G+SGG DSAL AA + A G+E Sbjct: 21 QEEIDRRVAFLA--DYLVASGAKGFVLGISGGQDSALAGKLSQLAAETLRAGGREAQFLA 78 Query: 324 IMLPYKYTSPQSLEDAAACAKALG----CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + LPY S ++ DA + + +V P S Q E V Sbjct: 79 VRLPYGAQSDEA--DAQISLQFIRPDRIVAANVKP--GADATAASAAEALEQHELRDFVR 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R + AL+ +++ T + +E G+ T YGD PL L K Q Q Sbjct: 135 GNIKARERMVLHYALAGQLGHLVVGTDHAAEAVTGFFTKYGDGGVDVTPLTGLTKRQGAQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKR 495 L + P SI +K P+A+L RP D+E+L Y LDD ++ Sbjct: 195 LLHHLGA--------------PASITKKVPTADLEDERPGLADEEALGLTYAQLDDYLE- 239 Query: 496 IVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 + +++T +E + + +KR Sbjct: 240 -----------GKPVDEQTCAKIEEIFLATRHKR 262 >gi|226328039|ref|ZP_03803557.1| hypothetical protein PROPEN_01930 [Proteus penneri ATCC 35198] gi|225203743|gb|EEG86097.1| hypothetical protein PROPEN_01930 [Proteus penneri ATCC 35198] Length = 43 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 21/34 (61%), Positives = 29/34 (85%) Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 +EYKRRQAPVG +IT+++FG+DR YPI++ F H Sbjct: 8 NEYKRRQAPVGPRITSRNFGKDRRYPITSGFGRH 41 >gi|19076019|ref|NP_588519.1| nitrilase family protein (predicted) [Schizosaccharomyces pombe 972h-] gi|74582249|sp|O59829|YCU9_SCHPO RecName: Full=Probable nitrilase C965.09 gi|3136038|emb|CAA19069.1| nitrilase family protein (predicted) [Schizosaccharomyces pombe] Length = 272 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 17/225 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEA--NRQGMDLILFTELFISGYPPEDLVFKKS 61 K IA Q+ P V D+ N+ K E + +LILF EL SGY + + + Sbjct: 2 KANIACVQMAPKVCDVKHNLQKMSSYVHEVMESNPSTNLILFPELITSGYECGNTFTQIA 61 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVV-ILDAGNIIAVRDKINL 117 I + T+ + I+ GFP ++++ + NS + I + GN+ V K++L Sbjct: 62 EIAGEGPSFKTMSNLAAKYHVNIIYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRKVHL 121 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 F +R S+ PI +LG++IC D + + GA+ L Sbjct: 122 -----FDTERKHFKKGSDFPIFETSFGKLGVMICWDT-AFPEVARIHALNGADLLV---V 172 Query: 177 SPYYHNKLKKRHEIVTGQISHVH-LPIIYVNQVGGQDELIFDGAS 220 + + N ++VT + + +P++ N+VG ++L F G S Sbjct: 173 ATNWENPYSDDWDLVTKARAFENCIPLVAANRVGTDEKLSFFGHS 217 >gi|40890217|gb|AAR97453.1| nitrilase [uncultured organism] Length = 349 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 22/171 (12%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------- 52 K ++ A Q+ P + G + K A ++A QG +L++F E F+ YP Sbjct: 6 KTVRAAAIQIAPDLDSAGGTLDKVCTAIQKAAAQGAELVVFPETFLPYYPYFSFVRPPFA 65 Query: 53 --PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 PE L+ + + D + + G +V+G +D + N+ ++ DA G ++ Sbjct: 66 SGPEHLLLYERAVAVPGPVTDAVSAVARSHGVVVVLGVNERDHGTLYNTQLVFDANGELV 125 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 R KI P Y HE+ + G + V + RLG L C W++ N Sbjct: 126 LKRRKIT-PTY---HERMIWGQGDGSGLKVVQTAVGRLGALAC---WEHYN 169 >gi|325204357|gb|ADY99810.1| NAD+ synthetase [Neisseria meningitidis M01-240355] Length = 273 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PY 328 + +A V L Y + N ++G+SGGIDSA+ +A+A + T++L P Sbjct: 12 DTQAVITHIVRWLDKYAAQANAKGFVVGVSGGIDSAVVSALAA----RTGRTTLLLDMPI 67 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAE 380 + P LE A + L +Y + DL + F + +P + Sbjct: 68 R-QHPDQLERARLHIRNLQGQYANVSAQTVDLTDTFQTFEQTVGVHQTAFDNQPLSLA-- 124 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N +SR+R L ++ T NK E VG+ T YGD +P+ DL KTQV++ Sbjct: 125 NARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYR 184 Query: 440 LA 441 LA Sbjct: 185 LA 186 >gi|229104642|ref|ZP_04235304.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock3-28] gi|228678706|gb|EEL32921.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock3-28] Length = 280 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 13/181 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+K+A Q++ V GD+ N+ A+ EA ++ D+I+ EL+ +GY DL Sbjct: 20 EKMKVACIQMDIVFGDVEKNMENAKNKISEAMKERPDVIVLPELWTTGY---DLTRLSEI 76 Query: 63 IQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINL 117 A ++T LK + G IV G +Q ++GV N++ V+ + G+++ K++L Sbjct: 77 --ADRDGLETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNNEGDLVNEYSKVHL 134 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + E + I+G DI IC DI + H K GA+ LF + Sbjct: 135 --FQLMDEHKYLIAGNETGEFKLDDIECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEW 191 Query: 178 P 178 P Sbjct: 192 P 192 >gi|15677229|ref|NP_274382.1| NH(3)-dependent NAD synthetase [Neisseria meningitidis MC58] gi|7226610|gb|AAF41738.1| putative NH(3)-dependent NAD+ synthetase NadE [Neisseria meningitidis MC58] gi|316984172|gb|EFV63150.1| NAD+ synthetase [Neisseria meningitidis H44/76] Length = 273 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 24 LDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRPTLLLDMPIR-QHPGQLERAR 78 Query: 341 ACAKALGCKYDVLPIH--DLVNHFFSLMSQF------LQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 79 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGAHQTAFDSQPLSLA--NARSRLRMLTLY 136 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 137 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|224476969|ref|YP_002634575.1| NAD synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421576|emb|CAL28390.1| NAD synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 277 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 40/245 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ- 322 P + E + + + +++YVQ + F K +++G+SGG DS L A IAV L E + Sbjct: 13 PEIDSETEVRSIIRFIKEYVQSHGFIKSLVLGISGGQDSTLAGRLAEIAVRELRSEGREC 72 Query: 323 ---TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIV 378 + LPY +DA AL + P + + + Q ++ E +G Sbjct: 73 HFIAVKLPYGIQ-----KDADEVEDALNF---IEPDQTVTVNIKPAVDQGVKALEEAGFH 124 Query: 379 AENIQ-----SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + Q +R R + A++ ++ +++ T + +E G+ T YGD + PL L Sbjct: 125 LTDFQRGNEKARERMKVQFAIAANTSGIVIGTDHSAENITGFFTKYGDGAADIAPLFGLD 184 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P + EK P+A+L +P D+++L Y + Sbjct: 185 KRQGRQLLEY---------LGA-----PKHLYEKVPTADLEDDKPQLPDEDALGVTYQAI 230 Query: 490 DDIIK 494 DD ++ Sbjct: 231 DDYLE 235 >gi|220934534|ref|YP_002513433.1| glycosy hydrolase family protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995844|gb|ACL72446.1| glycosy hydrolase family protein [Thioalkalivibrio sp. HL-EbGR7] Length = 291 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 31/281 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKK 60 +KIA+ Q D N+A++ +A EA G L++ EL Y D+ + Sbjct: 1 MKIALVQ-QANTADREANLARSLKAIGEAATAGARLVVLQELHTGLYFCQTEDTDVFDQA 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 I S+ + + H ++VG F R+ N+ V+LDA G + K+++ Sbjct: 60 EPIPGPSTQALSEAAAKH---GVVIVGSLFERRAAGLYHNTAVVLDADGRLAGTYRKMHI 116 Query: 118 PNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL----- 171 P+ ++EK F G +P+ RLG+L+C D W + + GAE L Sbjct: 117 PDDPGYYEKFYFTPGDLGFEPVDTAVGRLGVLVCWDQW-FPEAARLMALAGAELLIYPTA 175 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDELI-------FDGASF 221 N + ++R +T Q +H LP++ VN+ G + + F G+SF Sbjct: 176 IGWNPEDPEDEQARQREAWITIQRAHAVANGLPVVSVNRTGFEADPSGVTAGSRFWGSSF 235 Query: 222 CFDGQQQLAFQMKHFSEQNFMTE---WHYDQQLSQWNYMSD 259 Q + Q E + E +Q W Y+ D Sbjct: 236 VCGPQGEFLAQAPTDQETVLVAEVDMARAEQVRRIWPYLRD 276 >gi|323443020|gb|EGB00641.1| NAD synthetase [Staphylococcus aureus O46] Length = 273 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAA---IAVDALGKENVQ----TIMLPYKYTSPQ 334 +++YVQ ++F K +++G+SGG DS L I+V+ L +E + + LPY Sbjct: 31 IKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQISVNELREEGIDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVEQALRF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKELYEKPPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVSPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|332878791|ref|ZP_08446506.1| NAD+ synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683142|gb|EGJ56024.1| NAD+ synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 256 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 32/198 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS----LED 338 +++Y Q+ ++IG+SGG+DSA+ + + + + T+ L +S E+ Sbjct: 12 IKNYAQQARVKGLVIGISGGVDSAVVSTLC----ARTGLPTLCLEMPIHQAESHISRAEE 67 Query: 339 AAACAKA-----LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 + KA + D+ P+ D F + + + N ++R+R L Sbjct: 68 HISFLKAHYPNVTNLRVDLTPVFDQ----FVVQVPLTDKPTYEMALANTRARLRMTTLYY 123 Query: 394 LSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 + +++ T NK E VG+ T YGD +P+ DL K++V++L + Sbjct: 124 FAGLEGYIVVGTGNKIEDFGVGFFTKYGDGGVDISPIADLMKSEVYKLGEYLQ------- 176 Query: 453 LGPLTEVIPPSILEKSPS 470 +P SIL+ PS Sbjct: 177 -------VPQSILKAKPS 187 >gi|270340102|ref|ZP_06007041.2| para-aminobenzoate synthase [Prevotella bergensis DSM 17361] gi|270332655|gb|EFA43441.1| para-aminobenzoate synthase [Prevotella bergensis DSM 17361] Length = 301 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 29/280 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE----DLVFKK 60 +KI + QL+ V D+ NI + ++G LI+ EL S Y + DL Sbjct: 9 IKIGLLQLHNV-ADVKENIHRLDTEIRSLAKRGAQLIVLQELHNSLYFCQTENVDLFDLA 67 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLP 118 I S+ D + G IV + G+ N+ V+++ G+I K+++P Sbjct: 68 EPIPGPST--DFFGKIARECGVVIVTSLFEKRAPGLYHNTAVVMEKDGSIAGKYRKMHIP 125 Query: 119 NYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + ++EK F G PI RLG+++C D W + + QGAE L A Sbjct: 126 DDPAYYEKFYFTPGDLGFHPIDTSVGRLGVMVCWDQW-YPEAARLMALQGAEILIYPTAI 184 Query: 178 PY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGASFC 222 Y + ++R T Q H +P++ VN+VG + + + F G+SF Sbjct: 185 GYESSDSAEEQERQREAWTTVQRGHAVANGIPVVTVNRVGFEPDPSKQTQGIEFWGSSFV 244 Query: 223 FDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSD 259 Q +L ++ E++ + E H +Q W ++ D Sbjct: 245 AGPQGELLYRACSNDEESRVVEINLKHSEQVRRWWPFLRD 284 >gi|261380264|ref|ZP_05984837.1| NAD+ synthetase [Neisseria subflava NJ9703] gi|284797124|gb|EFC52471.1| NAD+ synthetase [Neisseria subflava NJ9703] Length = 262 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 16/170 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+DY ++ ++G+SGGIDSA+ + +A A +V + +P + S Q + A Sbjct: 14 LKDYAEQALAKGFVVGISGGIDSAVVSTLA--AQTGLSVLLLEMPIRQKSDQ-VNRAQEH 70 Query: 343 AKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNILMA 393 L +Y D+ P D F + E P+ +A N +SR+R L Sbjct: 71 MGRLKKRYPNVKAQSVDLTPAFDT---FADTVDVSETEFPNKQLALANARSRLRMTTLYY 127 Query: 394 LSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++ T NK E VG+ T YGD +P+ DL KTQV+ LA+ Sbjct: 128 YGQLHGLLVAGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYALAA 177 >gi|325134400|gb|EGC57045.1| NAD+ synthetase [Neisseria meningitidis M13399] Length = 273 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 14/168 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ +A+A + T++L P + P LE A Sbjct: 24 LDEYAARANAKGFVVGVSGGIDSAVVSALAA----RTGRPTLLLDMPIR-QHPGQLERAR 78 Query: 341 ACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNILMAL 394 + L +Y + + + F Q + + + N +SR+R L Sbjct: 79 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGTHQTAFANQPLSLANARSRLRMLTLYYY 138 Query: 395 SNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 139 GQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|315660164|ref|ZP_07913021.1| NAD+ synthetase [Staphylococcus lugdunensis M23590] gi|315494845|gb|EFU83183.1| NAD+ synthetase [Staphylococcus lugdunensis M23590] Length = 279 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 46/233 (19%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPYKYTSPQ 334 +++YV ++F K +++G+SGG DS L A +AVD L E + + LPY Sbjct: 31 IKNYVLSHSFIKSLVLGISGGQDSTLTGKLAQLAVDELNAEGRKCEFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ-----SR 385 +DAA A+ K + I V+ S+ S LQE +GI + Q +R Sbjct: 88 --KDAAEVDDAIAFIQPDKVVTVNIKPAVDQ--SVTS--LQE--AGIKLTDFQKGNEKAR 139 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R + ++++H++ +++ T + +E G+ T YGD + P+ L K Q QL + + Sbjct: 140 ERMKVQFSIASHTQGIVVGTDHSAENITGFFTKYGDGAADIAPIFGLNKRQGRQLLVFLH 199 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 200 A--------------PKHLYEKVPTADLEDDKPQLPDEEALGVTYNDIDDYLE 238 >gi|118472869|ref|YP_890941.1| hydrolase, carbon-nitrogen family protein [Mycobacterium smegmatis str. MC2 155] gi|118174156|gb|ABK75052.1| hydrolase, carbon-nitrogen family protein [Mycobacterium smegmatis str. MC2 155] Length = 261 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 20/237 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ + +A+ Q V GD+A N+ +A A A G DL++F ELF+ GY D+V + Sbjct: 1 MRTVDVAVVQEPAVAGDVAANVRRAVAAL--AKHPGADLVVFPELFLCGY-RLDVVADAA 57 Query: 62 --FIQACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINL 117 I D + HD +V GF + + V NS++ +D G + V K +L Sbjct: 58 IEMIPEPGPVADLCAAAAAHD--TAVVTGFAERSGDLVYNSLLCIDRTGAVAGVYRKTHL 115 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 E F +G + I +R+G +IC D+ + I + L G + S N Sbjct: 116 FG----AECEAFATGDRLEVIEVDGLRVGPMICFDV-EFPEIARTLALSGVDLFVVSSAN 170 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 PY+H+ R ++ + + P++Y N +G + L F G S D +L + Sbjct: 171 MFPYHHD---HRVACLSRALEN-RTPLVYSNLIGAEAGLTFVGGSRVVDAGGELLVE 223 >gi|75760103|ref|ZP_00740165.1| Carbon-nitrogen hydrolase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492414|gb|EAO55568.1| Carbon-nitrogen hydrolase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 303 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 15/227 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY DL Sbjct: 43 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGY---DLARLSEI 99 Query: 63 IQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 A ++T LK + G IV G +Q ++GV N++ +++ G ++ K++L Sbjct: 100 --ADRDGLETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNKEGELVNEYSKVHL 157 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + E + I+G S D+ IC DI + H K G++ LF + Sbjct: 158 --FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GSKVLFVVAEW 214 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L ++ + ++ N+ G F G S D Sbjct: 215 PLV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 259 >gi|289550370|ref|YP_003471274.1| NAD synthetase [Staphylococcus lugdunensis HKU09-01] gi|289179902|gb|ADC87147.1| NAD synthetase [Staphylococcus lugdunensis HKU09-01] Length = 279 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 46/233 (19%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPYKYTSPQ 334 +++YV ++F K +++G+SGG DS L A +AVD L E + + LPY Sbjct: 31 IKNYVLSHSFIKSLVLGISGGQDSTLTGKLAQLAVDELNAEGRKCEFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ-----SR 385 +DAA A+ K + I V+ S+ S LQE +GI + Q +R Sbjct: 88 --KDAAEVDDAIAFIQPDKVVTVNIKPAVDQ--SVTS--LQE--AGIKLTDFQKGNEKAR 139 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R + ++++H++ +++ T + +E G+ T YGD + P+ L K Q QL + + Sbjct: 140 ERMKVQFSIASHTQGIVVGTDHSAENITGFFTKYGDGAADIAPIFGLNKRQGRQLLVFLH 199 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 200 A--------------PKHLYEKVPTADLEDDKPQLPDEEALGVTYNDIDDYLE 238 >gi|282877140|ref|ZP_06285981.1| hydrolase, carbon-nitrogen family [Prevotella buccalis ATCC 35310] gi|281300738|gb|EFA93066.1| hydrolase, carbon-nitrogen family [Prevotella buccalis ATCC 35310] Length = 295 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 20/181 (11%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 +VVI G I K+++P+ ++EK F G PI RLG+L+C D W Sbjct: 100 TAVVIEKDGTIAGKYRKMHIPDDPAYYEKFYFTPGDLGFHPIDTSIGRLGVLVCWDQWY- 158 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQV 208 + + QGA+ L A Y + + ++R+ +T Q H +P+I VN+V Sbjct: 159 PEAARLMALQGAQLLIYPTAIGYESSDDKDEQQRQRNAWMTVQRGHAVANGIPVITVNRV 218 Query: 209 GGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMS 258 G +D+ + F G+SF Q +L +Q E++ + + H +Q W ++ Sbjct: 219 GHEDDPSGQTNGINFWGSSFVVGPQGELYYQACDDDEESVVIDLDLDHSEQVRRWWPFLR 278 Query: 259 D 259 D Sbjct: 279 D 279 >gi|253581177|ref|ZP_04858435.1| carbon-nitrogen hydrolase [Ruminococcus sp. 5_1_39B_FAA] gi|251847534|gb|EES75506.1| carbon-nitrogen hydrolase [Ruminococcus sp. 5_1_39BFAA] Length = 292 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 27/255 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 ++ + +A Q+ + NIA A +A +G +++L ELF Y ++ ++ Sbjct: 1 MRNVTVAAVQMK-CSKSVEKNIAHAEELVRQAAAKGAEIVLLPELFERPYFCQERRYEYY 59 Query: 61 SFIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q + A+ + G I V F ++ NSV +LDA G + + K ++ Sbjct: 60 EYAQTAEENPAVRHFSRVAAELGIVIPVSFYEKEVNNTYNSVAVLDADGKNLGIYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGIL---ICEDIWKNSNICKHLKKQGAEFLF-- 172 P+ + EK F G + + D R G + IC D W + + QGAE LF Sbjct: 120 PDDHYYQEKFYFTPGDTGFKVF--DTRFGTIGVGICWDQW-FPETARCMALQGAELLFYP 176 Query: 173 -SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQVGGQ------------DELIFDG 218 ++ + P + ++ + G + +P+I N++G + L F G Sbjct: 177 TAIGSEPILECDSMEHWRRCMQGHAASNLIPVIAANRIGEETVEPCPENGMQKSALNFYG 236 Query: 219 ASFCFDGQQQLAFQM 233 +SF D L ++ Sbjct: 237 SSFITDNTGALCAEL 251 >gi|170768816|ref|ZP_02903269.1| NAD+ synthetase [Escherichia albertii TW07627] gi|170122364|gb|EDS91295.1| NAD+ synthetase [Escherichia albertii TW07627] Length = 275 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQESGNESLQFIAVRLPYCVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTNGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + EN + ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYENIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KSVPEQVARTIENWYLKTEHKRR 263 >gi|28572518|ref|NP_789298.1| NAD synthetase [Tropheryma whipplei TW08/27] gi|46396364|sp|Q83GA8|NADE_TROWT RecName: Full=NH(3)-dependent NAD(+) synthetase gi|46396366|sp|Q83HW8|NADE_TROW8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|28410650|emb|CAD67036.1| NH(3)-dependent NAD(+) synthetase [Tropheryma whipplei TW08/27] Length = 271 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 38/289 (13%) Query: 257 MSDDSASTMYI-PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIA 312 M D + T+ + P + E + + V L DY++ + ++G+SGG DSAL IA Sbjct: 1 MCCDISKTLCVKPFIDPEEEISHRVSFLADYLRHSRASGYVLGISGGQDSALAGRLCQIA 60 Query: 313 VDALGK----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMS 367 V+++ + I LPY +S DA + + ++ I ++ ++ Sbjct: 61 VESVRSIGFDATLWAIRLPYGQQFDES--DAQTAMQFISPDEELSFDIRSATDNLCVDLN 118 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + L + S NI++R+R + A++ H A+++ T + +E G+ T +GD + Sbjct: 119 RSLGSKISDFNRGNIKARLRMVVQYAVAAHHDALVVGTDHAAEAVTGFFTKFGDGAADIL 178 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYP 487 PL L K Q + LG SI+EK P+A+L L P Sbjct: 179 PLYGLTKGQ---------GRALLKALGACD-----SIIEKVPTADL---------LDDLP 215 Query: 488 ILDDIIKRIVE--NEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 L D + ++ + ++F+ D T+ E Y S +R P+ Sbjct: 216 CLPDETELGLQYRDIDAFLEGKPVSEDITMAITER--YKSTLHKRMPPI 262 >gi|15807867|ref|NP_285524.1| NAD synthetase [Deinococcus radiodurans R1] gi|25090810|sp|Q9RYV5|NADE_DEIRA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|6460473|gb|AAF12179.1|AE001862_5 NH3-dependent NAD+ synthase [Deinococcus radiodurans R1] Length = 287 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 32/264 (12%) Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ-------TIML 326 A+ V L DY+Q ++G+SGG DS L + A+ + Q + L Sbjct: 29 AEVERRVAFLCDYLQSTPTKGFVLGISGGQDSTLAGRLCQLAVERRRSQGHGATFLAVRL 88 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 PY + ++ DA + +V + I + + + L E V N+++R Sbjct: 89 PYGVQADEA--DAQQALDFIQADREVTVNIKEAADASVAAAQAALGSEVRDFVRGNVKAR 146 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R AL+ +++ T + +E G+ T YGD PL L K Q QL + Sbjct: 147 ERMVAQYALAGQENLLVVGTDHAAEALTGFYTKYGDGGVDLTPLSGLTKRQGAQLLAHLG 206 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 + P K P+A+L + D+ LP D++ + + Sbjct: 207 A--------------PEGTWRKVPTADL---EDDRPGLP-----DEVALGVTYAQIDAYL 244 Query: 506 NDQEYNDETVRYVEHLLYGSEYKR 529 +E +DE +E L S +KR Sbjct: 245 EGREVSDEAAARLERLFLNSRHKR 268 >gi|47097327|ref|ZP_00234883.1| hydrolase, carbon-nitrogen family [Listeria monocytogenes str. 1/2a F6854] gi|254899973|ref|ZP_05259897.1| hypothetical protein LmonJ_09170 [Listeria monocytogenes J0161] gi|254911475|ref|ZP_05261487.1| hydrolase [Listeria monocytogenes J2818] gi|254935801|ref|ZP_05267498.1| hydrolase [Listeria monocytogenes F6900] gi|47014303|gb|EAL05280.1| hydrolase, carbon-nitrogen family [Listeria monocytogenes str. 1/2a F6854] gi|258608388|gb|EEW20996.1| hydrolase [Listeria monocytogenes F6900] gi|293589417|gb|EFF97751.1| hydrolase [Listeria monocytogenes J2818] Length = 296 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 24/206 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIQYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I A S+ + TLK + GI + + ++ N+ +I+D Sbjct: 61 PLATGFGAERFKWLDEAIAADSAYVSTLKKLAKELQIGICATYLSKTEQRTQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR 187 +GAE + NA +P N+L R Sbjct: 177 LKGAEIILVPNACDMNPARLNQLNSR 202 >gi|313681374|ref|YP_004059112.1| n-carbamoylputrescine amidase [Sulfuricurvum kujiense DSM 16994] gi|313154234|gb|ADR32912.1| N-carbamoylputrescine amidase [Sulfuricurvum kujiense DSM 16994] Length = 282 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 31/241 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A Q+ + D A N+AKA +A R G ++IL ELF Y +D+ K F Sbjct: 2 VKVAAIQMQ-MSEDKASNVAKAESMVRDAARNGANIILIPELFEGYYFCKDMD-DKYFAW 59 Query: 65 A----CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 A + I + + G + + + +D E NS+V++DA G ++ K ++P+ Sbjct: 60 AQPLENNPLIAHFSALAKELGVVLPISYFERDGERYFNSLVMIDADGTVMENYRKTHIPD 119 Query: 120 YSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + EK F G + + R +G+ IC D W + L GA+ +F Sbjct: 120 GPGYEEKFYFEPGDTGFKVWETRYGNVGVGICWDQW-FPETARSLTLLGADMIF------ 172 Query: 179 YYHNKLKKRHEIVTGQISHVH-----------LPIIYVNQVG---GQD-ELIFDGASFCF 223 Y + EI SH +P+I N++G G+ L F G+SF Sbjct: 173 -YPTAIGSEPEIGVDSASHWQRVQMGHSAANIIPVIAANRIGEEVGESCTLTFYGSSFIT 231 Query: 224 D 224 D Sbjct: 232 D 232 >gi|288927484|ref|ZP_06421331.1| hydrolase, carbon-nitrogen family [Prevotella sp. oral taxon 317 str. F0108] gi|288330318|gb|EFC68902.1| hydrolase, carbon-nitrogen family [Prevotella sp. oral taxon 317 str. F0108] Length = 293 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 21/182 (11%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+++ G++ + K+++P+ ++EK F G +PI RLG+L+C D W Sbjct: 97 NTAVVMEKDGSVAGIYRKMHIPDDPAYYEKFYFTPGDLGFEPINTSVGRLGVLVCWDQWY 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GA+ L A Y + + ++R T Q +H LP++ VN+ Sbjct: 157 -PEAARLMAMRGADLLIYPTAIGYAASDDEAEQQRQREAWTTIQRAHAVANGLPVVAVNR 215 Query: 208 VGGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE---WHYDQQLSQWNYM 257 VG + + + F G+SF Q +L F+ EQ + + H +Q W + Sbjct: 216 VGFEPDPSQQTPGINFWGSSFVAGPQGELLFRANDTEEQRAIVDVDLAHSEQVRRWWPFF 275 Query: 258 SD 259 D Sbjct: 276 RD 277 >gi|162149505|ref|YP_001603966.1| nitrilase [Gluconacetobacter diazotrophicus PAl 5] gi|161788082|emb|CAP57686.1| putative nitrilase [Gluconacetobacter diazotrophicus PAl 5] Length = 319 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 30/197 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIA-GNIAKARRAREEANRQGMDLILFTELFISGYP------- 52 M + ++ A Q++PV+GD G K R EA +G+ L +F E F+ YP Sbjct: 1 MSRIVRAAAVQISPVLGDDGMGTARKVCRTIREAAEKGVKLAVFPETFVPYYPYFSFIKP 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 E L + + D + + G +V+G +D + N+ VI DA G Sbjct: 61 AFRFGAEHLALYERAVSVPGPITDMVAEAARETGMVVVLGVNERDHGTLYNAQVIFDATG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN------ 158 I+ R KI P Y HE+ + G + V R+G L C W++ N Sbjct: 121 EIVLKRRKIT-PTY---HERMVWGQGDGSGLTVVDSAAGRIGALAC---WEHYNPLARYA 173 Query: 159 -ICKHLKKQGAEFLFSL 174 + +H + A+F SL Sbjct: 174 LMAQHEEIHCAQFPGSL 190 >gi|116206696|ref|XP_001229157.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88183238|gb|EAQ90706.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 677 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 117/550 (21%), Positives = 188/550 (34%), Gaps = 103/550 (18%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN V D GN+ + + +A G L + EL I GY D + Sbjct: 5 VTVATCSLNQWVLDWEGNLGRIIESIHQAKAAGARLRVGPELEICGYSSLDHFHELDVYT 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L D G + VG P + N VI G I+ +R K+ L N + Sbjct: 65 HSLEMLAQLLQDKSTHGILLDVGVPILHRNLRYNCRVICLDGKILLIRPKMWLANDGNYR 124 Query: 125 EKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F + + I + G CE+++ Sbjct: 125 EMRHFTPWMRPRETELFHLPKILAELQGETHVLFGDAVISTPETAFGAETCEELFTPKAP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE-LIFDG 218 + G E + + + S + KL R +++ +Y NQ G E L FDG Sbjct: 185 HIDMALDGVEIITNSSGSHFTLRKLDTRLQLIMEATRKSGGVYLYANQQGCDGERLYFDG 244 Query: 219 ASFCFDGQQQLAFQMKHFS--------------------------EQNFMTEWHYDQQLS 252 + +A Q FS Q + Y + + Sbjct: 245 CAMIIVNGDVVA-QGSQFSLNDVEVVTATVDLEEVRSYRAAISRGLQAAASTAKYQRIQT 303 Query: 253 QWNYMSDDS------ASTM-----YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + S+D A T+ Y ++EE A C L DY++++ ++ LSG Sbjct: 304 PFELSSEDGDADVTVAPTLLIQPRYHSVEEEIALSGGCYLW--DYLRRSGTAGYLVPLSG 361 Query: 302 GIDSALCAA-------IAVDALGKENVQTI----MLPYKY-------TSPQSLEDAAACA 343 GIDS A I + LG+ N Q + +P KY T+PQ L Sbjct: 362 GIDSCATAGIVYSLCRIVMGGLGEGNKQVLEEVQRIP-KYGGEGVFTTTPQEL------- 413 Query: 344 KALGCKYDVLPIH-DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA-- 400 CK PI+ + Q Q+ I + ++ I + LS + Sbjct: 414 ----CKPGFSPIYMGMKKQSSRETPQRAQDLSEAIGSYHVNLDIDDEVGQMLSTARQRPG 469 Query: 401 ----MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++L ++N E GY T Y S NP+ + K + + +W + L Sbjct: 470 GGSLLVLGSANVGESLRGYLTKYDCSSADINPIGSIDKADLKRFIAWAEKNFDLPCLHEF 529 Query: 457 TEVIPPSILE 466 +P + LE Sbjct: 530 LTAVPTAELE 539 >gi|167624439|ref|YP_001674733.1| NAD synthetase [Shewanella halifaxensis HAW-EB4] gi|189083410|sp|B0TK55|NADE_SHEHH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|167354461|gb|ABZ77074.1| NAD+ synthetase [Shewanella halifaxensis HAW-EB4] Length = 276 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 54/253 (21%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQT------IMLPYKYTS 332 ++ +++++ +++G+SGG+DS+ LC +AVD L E+ + + LPY Sbjct: 28 IKSKLKQSSTTSLVLGISGGVDSSVGGRLCQ-LAVDELNSESQSSSYQFIAVRLPYDV-- 84 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL---MSQFLQE-EPSGI----------V 378 Q ED A L C++ VN + S+ L E +GI V Sbjct: 85 -QKDEDEAQ----LACQFIQPSKQVTVNVKLGVDGVHSETLAAIEAAGIALPEHDKIDFV 139 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 N+++R+R ++ +++ T + +E G+ T +GD + PL L K QV Sbjct: 140 KGNVKARMRMVAQYDIAGLVGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVR 199 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 QLA + + P ++ K+P+A+L P Q D+E+L Y +DD ++ Sbjct: 200 QLADYLGA--------------PEVLVSKAPTADLEEEHPQQEDEEALGLTYEQIDDFLE 245 Query: 495 -RIVENEESFINN 506 ++V N F+N+ Sbjct: 246 GKVVSN---FVND 255 >gi|320533809|ref|ZP_08034400.1| hydrolase, carbon-nitrogen family [Actinomyces sp. oral taxon 171 str. F0337] gi|320133978|gb|EFW26335.1| hydrolase, carbon-nitrogen family [Actinomyces sp. oral taxon 171 str. F0337] Length = 229 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 2/128 (1%) Query: 6 KIAIAQLNPVVGDIAGNIAKA-RRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++A L V D A N A +AR A+ G+ L F EL ++GY +DL+ + Sbjct: 24 RVAAVTLPVVPVDPAANAAAIIEQARTLAD-DGVCLAAFPELCLTGYAIDDLLLSDVLLS 82 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +AI+TL++ + D +VVG P + + + N +++ G + + K LP Y EF+ Sbjct: 83 DVLTAIETLRAASADLLPALVVGAPLRLGDRLYNCALVIQGGRVRGIAPKSYLPTYREFY 142 Query: 125 EKRTFISG 132 EKR F G Sbjct: 143 EKRHFAPG 150 >gi|332521657|ref|ZP_08398110.1| NAD+ synthetase [Lacinutrix algicola 5H-3-7-4] gi|332042746|gb|EGI78946.1| NAD+ synthetase [Lacinutrix algicola 5H-3-7-4] Length = 262 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 39/223 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L+DY + ++G+SGGIDSA LCA +D L I +P + + + Sbjct: 14 LKDYAVNAKVNGFVVGISGGIDSAVTSTLCAETGLDVL------CIEMPI-HQAASHVSR 66 Query: 339 AAACAKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A K L +Y D+ P+ + F + +S ++ + N ++R+R Sbjct: 67 AQEHIKQLKERYPNVKDTRTDLTPVFE---EFKTEVSLDGEQATVDMALANTRARLRMTT 123 Query: 391 LMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 L + ++ T NK E VG+ T YGD +P+ DL K++V+++ + Sbjct: 124 LYYHAGLLGLLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLLKSEVYKIGEYLK---- 179 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL-RPHQTDQESL-PPYPILD 490 +P SI+ +PS L ++D++ + YP L+ Sbjct: 180 ----------VPASIMAAAPSDGLFGDSRSDEDQIGASYPELE 212 >gi|15605691|ref|NP_213067.1| hypothetical protein aq_103 [Aquifex aeolicus VF5] gi|2982848|gb|AAC06470.1| hypothetical protein aq_103 [Aquifex aeolicus VF5] Length = 246 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 5/114 (4%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 L+L E++ SG+ E+L + Q ++ LK + + + P + EG+LN+ Sbjct: 32 LVLLPEMWYSGFDYENL---EEHAQKTPEVLEVLKKISKEKSLTLCGTLPEKGTEGILNT 88 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 +++ G +I R KI L + F E + FI G N + + GILIC +I Sbjct: 89 AFLIEDGRVIGKRSKIKL--FPIFDEDKYFIPGKENKVFETKLGKAGILICFEI 140 >gi|56552266|ref|YP_163105.1| N-carbamoylputrescine amidase [Zymomonas mobilis subsp. mobilis ZM4] gi|241761671|ref|ZP_04759758.1| N-carbamoylputrescine amidase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|4378848|gb|AAD19716.1| hydrolase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543840|gb|AAV89994.1| N-carbamoylputrescine amidase [Zymomonas mobilis subsp. mobilis ZM4] gi|241373979|gb|EER63512.1| N-carbamoylputrescine amidase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 282 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 14/239 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 + ++ +A QL + DI NI + EEA QG +IL ELF Y ++ F Sbjct: 1 MTEITVAALQLA-LTDDIQTNIDRVSVLVEEAAAQGAKIILPPELFEGHYFCATEDESCF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 ++ + ++ I F D NS+ ++++ G ++ V K ++ Sbjct: 60 ARAKPVEKHPVVLAMQKLAKRLKVTIPTSFFESDPPHYYNSLAMINSDGEVMGVYRKSHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ + EK F G S + I++G+ IC D W + + GAE LF A Sbjct: 120 PDGPGYEEKFYFRPGNSGFKVWDCGGIKIGVGICWDQW-YPETARAMMLMGAELLFFPTA 178 Query: 177 ------SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 P R ++ +S+V +P+I N++G + L F G SF D + L Sbjct: 179 IGNEPHDPDLDTSRLWRRAMIGHAVSNV-VPVIASNRIGQEATLSFYGHSFIADQRGDL 236 >gi|197103791|ref|YP_002129168.1| hydrolase, carbon-nitrogen family [Phenylobacterium zucineum HLK1] gi|196477211|gb|ACG76739.1| hydrolase, carbon-nitrogen family [Phenylobacterium zucineum HLK1] Length = 292 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 40/288 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M +KL +A Q + D+A NIAK +A G +IL +ELF Y E+ Sbjct: 1 MTRKLSVAAIQTS-YGQDMAANIAKTEGFIRQAAADGAQVILPSELFQGPYFCVAQEERW 59 Query: 58 FKKSFI---QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDA-GNIIAV 111 F ++ C +A+ L + G+V+ ++EG NS+V++DA G+++ V Sbjct: 60 FATAYPWREHPCVTALAPLAKEL-----GVVLPISIFEREGPHYFNSLVMVDADGSLMGV 114 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEF 170 K ++P+ + EK F G + + R+G+ IC D W + + GAE Sbjct: 115 YRKSHIPDGPGYMEKYYFRPGDTGFKVWETKFGRIGVGICWDQWY-PEAARAMTLMGAEV 173 Query: 171 LF---SLNASPY---YHNKLKKRHEIVTGQISHVHLPIIYVNQV----------GGQDEL 214 L ++ + P+ R + +S+V +P++ N+ GGQ+ Sbjct: 174 LLYPTAIGSEPHDATLDTAAPWRRAMQGHAVSNV-IPVVGANRTGFEPWDGYPNGGQE-- 230 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSD 259 F G+SF D + L E E+ D + W + D Sbjct: 231 -FYGSSFIADHRGDLVAAFGREDEGVLKAEFDLDFLATHRAAWGFFRD 277 >gi|84385297|ref|ZP_00988329.1| NAD(+) synthetase [Vibrio splendidus 12B01] gi|84379894|gb|EAP96745.1| NAD(+) synthetase [Vibrio splendidus 12B01] Length = 276 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 42/236 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQ--TIMLPYKYTSP 333 ++ +Q++ +I+G+SGG+DS C A +AV++L G +N Q + LPY Sbjct: 28 IKTKLQQSGCKSLILGISGGVDSTTCGRLAQMAVNSLNESAGSDNYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENI 382 Q ED A A ++ K V +H +H + L + + I V N+ Sbjct: 85 QKDEDEAQLALSFIQPSQSVSVNIKAGVDGLH-AASHVALEGTGLLPTDSAKIDFVKGNV 143 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R R ++ + +++ T + +E G+ T +GD + PL L K QV +LA+ Sbjct: 144 KARARMIAQYEIAGYVGGLVIGTDHSAENITGFYTKHGDGACDLAPLFGLNKRQVRELAA 203 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + P +++K P+A EL P + D+ +L Y +DD ++ Sbjct: 204 TLGA--------------PEQLVKKVPTADLEELDPQKADEAALNLSYDQIDDFLE 245 >gi|304383154|ref|ZP_07365628.1| N-carbamoylputrescine amidase [Prevotella marshii DSM 16973] gi|304335731|gb|EFM01987.1| N-carbamoylputrescine amidase [Prevotella marshii DSM 16973] Length = 294 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 18/159 (11%) Query: 98 NSVVILD-AGNIIAVRDKINLPNYSEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWK 155 N+ V+L+ G I K+++P+ ++EK F G + +PI RLG+L+C D W Sbjct: 99 NTAVVLEHDGTIAGTYRKMHIPDDPAYYEKFYFTPGDTGFEPIDTSVGRLGVLVCWDQWY 158 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GAE L A Y + + ++R T Q H LP+I VN+ Sbjct: 159 -PEAARLMALRGAELLIYPTAIGYAADDTCDEQQRQREAWTTVQRGHAVANGLPVITVNR 217 Query: 208 VG------GQDELI-FDGASFCFDGQQQLAFQMKHFSEQ 239 VG GQ I F G+SF Q +L ++ E+ Sbjct: 218 VGHEPDSSGQTAGIRFWGSSFVAGAQGELLYRASETEEE 256 >gi|239916753|ref|YP_002956311.1| NH(3)-dependent NAD(+) synthetase [Micrococcus luteus NCTC 2665] gi|281414789|ref|ZP_06246531.1| NAD synthetase [Micrococcus luteus NCTC 2665] gi|239837960|gb|ACS29757.1| NH(3)-dependent NAD(+) synthetase [Micrococcus luteus NCTC 2665] Length = 302 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 57/274 (20%) Query: 262 ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL---CAAIAVD---- 314 A +P + A+ V L DY+ ++G+SGG+DS + A +AV+ Sbjct: 10 AEQCVLPEIDPAAEVERRVAFLADYLAATGASGFVLGISGGVDSTVGGRLAQLAVERRRA 69 Query: 315 --------ALG-------------------KENVQ--TIMLPYKYTSPQSLEDAAACAKA 345 ALG +EN + + LPYK ++ DA A Sbjct: 70 QLGVPDAVALGGPGTTPAGEAGVGADVVPSRENPRFTAVRLPYKVQHDEA--DARAAMDF 127 Query: 346 LGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 +G DV L I + V + ++ + E S N+++RIR A++ +++ Sbjct: 128 VGADQDVTLNIAEAVQGLAAAFAEGVGEPISDYNQGNVKARIRMTAQYAVAGAHGQLVIG 187 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T + +E G+ T +GD PL L K QV L + P + Sbjct: 188 TDHAAEAVTGFYTKFGDGGADVLPLAGLNKRQVRALGRELGA--------------PEPL 233 Query: 465 LEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 K P+A+L P QTD+ L Y +DD ++ Sbjct: 234 WNKVPTADLLDGTPGQTDEAELGMTYEDIDDYLE 267 >gi|227823067|ref|YP_002827039.1| putative hydrolase [Sinorhizobium fredii NGR234] gi|227342068|gb|ACP26286.1| putative hydrolase [Sinorhizobium fredii NGR234] Length = 259 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 16/229 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFKKSFI 63 +K+A Q+ V GDIA N+A+ A EA +G L++ EL I+GY ED+ Sbjct: 2 MKLAALQMKSVGGDIAANLARIEGAAAEAAAKGATLLVTPELGITGYGAGEDIPALAE-- 59 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + L+ + D G I+ GF ++ V NS V + + K +L Y ++ Sbjct: 60 PAKGGTVQALQRISRDAGIAIIAGFAEREGAAVYNSAVYVHGDGEPTIYRKSHL--YGDY 117 Query: 124 HEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-Y 180 +R+ + + +F+ + G+LIC D+ N+ + L GA+ + A P + Sbjct: 118 --ERSLFTPAQPETRLFKHQGVTCGMLICYDVEFPENV-RRLASAGADAVLVPTALPAGW 174 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF---DGQ 226 H I T + + + YVN G F G S C DGQ Sbjct: 175 SGTFITDHMIQTRAFEN-QVFVAYVNHCGSDAMFSFAGLS-CVASPDGQ 221 >gi|207109758|ref|ZP_03243920.1| NH(3)-dependent NAD+ synthetase (nadE) [Helicobacter pylori HPKX_438_CA4C1] Length = 116 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 11/115 (9%) Query: 318 KENVQTIMLPYKYTSPQSLEDAAACAKALG---CKYDVLPIHDLVNHFFSLMSQFLQEEP 374 KEN +++P + P+S DA + +Y + P + + F ++ Sbjct: 8 KENAHALLMPSSVSMPESKTDALNLCETFSIPYTEYSIAPYDAIFSSHF--------KDA 59 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 S N +R+R L S + ++++ TSNKSE +GYGTL+GD++ NP+ Sbjct: 60 SLTRKGNFCARLRMAFLYDYSLKTDSLVIGTSNKSERMLGYGTLFGDLACAINPI 114 >gi|254252334|ref|ZP_04945652.1| hypothetical protein BDAG_01556 [Burkholderia dolosa AUO158] gi|124894943|gb|EAY68823.1| hypothetical protein BDAG_01556 [Burkholderia dolosa AUO158] Length = 281 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 19/227 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKKSFI 63 +++ +AQL+ V D+A N K A+ G L++F E +SG+P + V Sbjct: 1 MQVELAQLSLVDADVAHNTRKTIDTIARADVAGGTKLVVFPETTLSGFPTRENV--ADVA 58 Query: 64 QACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 Q A+ ++ G + +GF +D E N+ V++D I +R Y + Sbjct: 59 QPIDGRAVSAVRDAARQKGVAVALGFAERDGERFYNTTVLVDKNGDIVLR-------YRK 111 Query: 123 FH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 H + F G + V+ + +G+LIC DI + + + A+ L N + Sbjct: 112 THLWASDVGVFTPGDRFETCVWNGLTVGLLICYDI-EFPETARAVGSLDADLLIVTNGNM 170 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFD 224 + +R + + + + VN+ G G D+L F G S D Sbjct: 171 DPFGPVHRRA--IAARAMENQMFAVMVNRCGSGDDDLTFAGLSALVD 215 >gi|116753402|ref|YP_842520.1| peptidyl-arginine deiminase [Methanosaeta thermophila PT] gi|116664853|gb|ABK13880.1| agmatine deiminase [Methanosaeta thermophila PT] Length = 624 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 30/239 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ + Q V D+ N+A+A E+A +G +++ EL+ + Y P + K + +Q Sbjct: 2 VRVGLVQTR-VTEDLNFNLARALDLVEDAANRGAEIVCLPELYRTSYFPRE---KNAKVQ 57 Query: 65 ACSSAI---DTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDA-GNIIAVRDKINLP 118 + I T +VV P ++ G + NS ++DA G+I V K ++P Sbjct: 58 QYAETIPGESTAAFSRLAARMNVVVIVPLFERYGSVYYNSAAVIDADGSIAGVYRKSHIP 117 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F+EK F G R L +LIC D W + + GA+ +F A Sbjct: 118 CDPMFYEKMYFFQGDGFRVFRTRHACLAVLICYDQWF-PEAARSVVLDGADIIFYPTAIG 176 Query: 179 YYHN-------------KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +++ H I G VH + VN+VG + E+ F G SF D Sbjct: 177 RVRGVEQAEGDWQTAWETVQRGHAIANG----VH--VAAVNRVGVEGEIAFWGGSFVCD 229 >gi|197119871|ref|YP_002140298.1| nitrilase/amidohydrolase superfamily protein [Geobacter bemidjiensis Bem] gi|197089231|gb|ACH40502.1| nitrilase/amidohydrolase superfamily protein, class 5 [Geobacter bemidjiensis Bem] Length = 259 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 22/228 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K +K A Q N + D+ N+A A +A QG++L + E++ G+ +L Sbjct: 1 MQKSVKAAAVQFNIALADVDQNLAYAEKALRRLAAQGVELAVLPEMWSCGFAYREL---N 57 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ L++ + + ++ P + V N+ ++D G + K++L + Sbjct: 58 QLATRTPGIVEKLQALSAELSLTVIGSLPEPHGDKVFNTAYVVDRGRVAGSYRKMHL--F 115 Query: 121 SEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 S E R G D I+ R+G++IC D+ + + + L GA+ + Sbjct: 116 SLMGEDRHLDRG---DSILLAQTSVGRIGVMICYDL-RFPELARRLAVDGADIIVVPGEW 171 Query: 178 PYYHNKLKKRHE----IVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 P K R E ++ G+ L +I N G +L F G+S Sbjct: 172 P------KPREEHWRGLLKGRAIENQLFVIAANACGVIGKLDFFGSSM 213 >gi|89070321|ref|ZP_01157634.1| putative hydrolase [Oceanicola granulosus HTCC2516] gi|89044070|gb|EAR50236.1| putative hydrolase [Oceanicola granulosus HTCC2516] Length = 258 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 35/230 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+ Q + GD+ +A+ R +EA QG L++F E +++GY L + Sbjct: 2 LRIALWQGAGIAGDLDATLAEVARRADEAREQGAGLLVFPEGYLTGYHVPGLA--PGGLP 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++ + G I++G +G+ N+ V D L Y+ Sbjct: 60 GVEAALEQVADIAARTGLTILMGTHLDTPDGLSNAAVAFGP-------DGRELGRYA--- 109 Query: 125 EKRTFISGYSND-------PIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 KR G+ D P+ F +R+G++IC D+ L + AE L Sbjct: 110 -KRMLFGGWEKDTFRPGAAPLRFECGGLRVGVVICYDVE-----FPELLRAEAEAGVDLV 163 Query: 176 ASPYYHNKLKKRHEIVTGQISHV-----HLPIIYVNQVGGQDELIFDGAS 220 A P L + HE ++ Q+ V + + Y N+ G + +L F G S Sbjct: 164 AVP---TALMEPHERISRQVVPVRAMENQVFVAYANRAGTEPDLRFVGLS 210 >gi|319785048|ref|YP_004144524.1| NAD+ synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170936|gb|ADV14474.1| NAD+ synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 319 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 85/214 (39%), Gaps = 50/214 (23%) Query: 280 VLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 V +LR+ V + V++GLSGGIDS++ A + A G++ V + +P + +S SL Sbjct: 14 VETLREQVLGTQRRRGVVVGLSGGIDSSVVATVCARAFGRDKVLGLFMPERDSSGDSLRL 73 Query: 339 AAACAKALGCKY---DVLPIHDLVNHFFS--------------------LMSQFLQ---- 371 + A LG D+ P + + + +M+ L+ Sbjct: 74 GRSVAGQLGIDTILEDIQPALEGIGAYARQTEAIRTAVPGYGEGWKCKLVMASVLESSGL 133 Query: 372 -------EEPSG---------------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 E+P G + A N + R+R ++ + T N+ Sbjct: 134 NITRLTVEDPDGKIDTVRLSPAAYLQIVAATNYKQRVRKMTEYYHADRLNYAVAGTPNRL 193 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 E G+ GD P+ LYKTQV+QLA + Sbjct: 194 EYDQGFFVKQGDGVADVMPIVHLYKTQVYQLAEY 227 >gi|281178811|dbj|BAI55141.1| NAD synthetase [Escherichia coli SE15] Length = 275 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q I LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAIRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|209520189|ref|ZP_03268961.1| NAD+ synthetase [Burkholderia sp. H160] gi|209499396|gb|EDZ99479.1| NAD+ synthetase [Burkholderia sp. H160] Length = 287 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 38/231 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQS 335 L DY++ ++ ++G+SGG+DS A +AV+ L + + LPY Sbjct: 36 LADYLRNSHLKTYVLGISGGVDSTTAGRLAQLAVERLRANHYDARFVAVRLPYGKQ---- 91 Query: 336 LEDAAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 D A +ALG D+ P D ++ F E V NI++R R Sbjct: 92 -RDEADALQALGFIRADENLTIDIQPAADAMLESLDQSGVSFRDESQRDFVHGNIKARQR 150 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ +++ T + +E +G+ T +GD PL L K +V Sbjct: 151 MIAQYAVAGARSGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLSKRRV---------R 201 Query: 448 GITSGLGPLTEVIPPSILEKSPSAE---LRPHQTDQESLP-PYPILDDIIK 494 + LG P ++ K P+A+ LRP + D+++ PY +DD ++ Sbjct: 202 AVAKTLG-----APDALAHKVPTADLEMLRPLRPDEDAYGIPYDEIDDFLE 247 >gi|320547893|ref|ZP_08042176.1| NH(3)-dependent NAD(+) synthetase [Streptococcus equinus ATCC 9812] gi|320447433|gb|EFW88193.1| NH(3)-dependent NAD(+) synthetase [Streptococcus equinus ATCC 9812] Length = 274 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 111/245 (45%), Gaps = 42/245 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ------TIMLPYKYTS 332 L+DY++K++F K ++G+SGG DS+L A IAV+ L E + LPY Sbjct: 30 LKDYMKKHSFLKSYVLGISGGQDSSLAGRLAQIAVEELRAETGDDSYKFIAVRLPY---G 86 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIR 387 Q+ ED A A K DV VN ++ Q + E +GI NI++R R Sbjct: 87 VQADEDDAQRALQF-IKPDV---SIAVNIKEAVDGQVHELEKAGITVSDFNKGNIKARQR 142 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ + ++ T + +E G+ T +GD PL L K Q QL Sbjct: 143 MITQYAVAGENSGAVIGTDHAAENITGFFTKFGDGGADVVPLYRLNKRQGKQL------- 195 Query: 448 GITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEE 501 + LG P+I EK P+A+L RP D+ +L Y +DD + K + + Sbjct: 196 --LAELGA-----DPAIYEKIPTADLEENRPGIADEVALGVTYNDIDDYLEGKTVSPEAQ 248 Query: 502 SFINN 506 S I N Sbjct: 249 SKIEN 253 >gi|255550131|ref|XP_002516116.1| nitrilase and fragile histidine triad fusion protein, putative [Ricinus communis] gi|223544602|gb|EEF46118.1| nitrilase and fragile histidine triad fusion protein, putative [Ricinus communis] Length = 329 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 17/197 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 KI + QL V D A NIA AR+A EEA +G L+L E++ S Y + I Sbjct: 42 FKIGLCQLL-VTPDKAKNIAHARKAIEEAAAKGAKLVLLPEIWNSPYSNDSFPVYAEDID 100 Query: 65 A---CSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL-- 117 A S + L IV G P + + + N+ + D GN+IA KI+L Sbjct: 101 AGHVASPSTAMLSQLARLLNITIVGGSIPERSGDRLYNTCCVFDTQGNLIAKHRKIHLFD 160 Query: 118 ---PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL--- 171 P F E +T +G + + + R+GI IC DI + + +GA + Sbjct: 161 IDIPGKITFIESKTLTAGETPNIVDTEVGRIGIGICYDI-RFQELAVLYAARGAHLICYP 219 Query: 172 --FSLNASPYYHNKLKK 186 F++ P + L++ Sbjct: 220 GAFNMTTGPLHWELLQR 236 >gi|229061706|ref|ZP_04199041.1| Carbon-nitrogen hydrolase [Bacillus cereus AH603] gi|228717589|gb|EEL69250.1| Carbon-nitrogen hydrolase [Bacillus cereus AH603] Length = 280 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 15/226 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K+K+A Q++ GD+ NI A+ EA ++ D+++ EL+ +GY DL Sbjct: 21 KMKVACIQMDIAFGDVEKNIESAKNKISEAMKEKPDVVVLPELWTTGY---DLTRLSEI- 76 Query: 64 QACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 A ++T LK + G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 77 -ADMDGLETKEMLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVTNKGQLVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + ++G D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLVAGNETGEFTLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|288799619|ref|ZP_06405078.1| hydrolase, carbon-nitrogen family [Prevotella sp. oral taxon 299 str. F0039] gi|288332867|gb|EFC71346.1| hydrolase, carbon-nitrogen family [Prevotella sp. oral taxon 299 str. F0039] Length = 295 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 29/284 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE-DLVFK 59 M K+K+ Q + DI N+ + ++ E+ +QG LI+ EL S Y + + V Sbjct: 1 MQNKIKVGFIQQHNT-NDINDNMQRLKKGIEQLAKQGAQLIVLQELHNSLYFCQLETVDN 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL---NSVVILDAGNIIAVRDKIN 116 + S+ ++V + + L +VVI G+I K++ Sbjct: 60 FDLAEPIPGPSTAFFSEIAAANNVVIVTSLFEKRAAGLYHNTAVVIEKDGSIAGKYRKMH 119 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ ++EK F G PI +LGIL+C D W + + GAE L Sbjct: 120 IPDDPAYYEKFYFTPGDLGFAPIQTSLGKLGILVCWDQWY-PEAARLMALNGAELLIYPT 178 Query: 176 ASPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGAS 220 A Y K ++R T Q H LP+I VN+VG + + + F G+S Sbjct: 179 AIGYESSDAEEEKQRQREAWTTVQRGHAVANGLPVIAVNRVGFEPDPSQQTQGITFWGSS 238 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 F Q + ++ E+ + E D Q S+ W ++ D Sbjct: 239 FVAGSQGEFIYRASETEEECTIVE--VDLQRSEQVRRWWPFLRD 280 >gi|149758910|ref|XP_001497616.1| PREDICTED: similar to NAD synthetase 1 [Equus caballus] Length = 706 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 126/601 (20%), Positives = 209/601 (34%), Gaps = 128/601 (21%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + ++ E A +G L EL I GY D ++ Sbjct: 1 MGRKVTVATCSLNQWALDFEGNLQRILKSIEIAKHKGARYRLGPELEICGYGCWDHYYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + N VI I+ +R K+ L N Sbjct: 61 DTLLHSLQVLAALLESPVTRDIICDVGMPVMHRNVRYNCRVIFLNRRILLIRPKMALANE 120 Query: 121 SEFHEKRTFISG-------------------------YSNDPIVFRDIRLGILICEDIWK 155 + E R F + + + RD +G ICE++W Sbjct: 121 GNYRELRWFTPWSRSRQTEEYFLPRMLQDLTKQETVPFGDAVLATRDTCIGSEICEELWT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 + + G E + + S + K R ++VT + + NQ G D L Sbjct: 181 PHSPHVDMGLDGVEIFTNASGSHHVLRKAHARVDLVTMATTKNGGIYLLANQKGCDGDRL 240 Query: 215 IFDGAS--------------FCFDGQQQLAFQMKHFSEQNFMTEWHYD----QQLSQWNY 256 +DG + F D + L + +++ E ++S + Sbjct: 241 YYDGCAMIAMNGHIFAQGSQFSLDDVEVLTATLDLEDVRSYRAEISSRNLAASRVSPYPR 300 Query: 257 MSDDSASTMYI----PLQEE-EADYN----------ACVLSLRDYVQKNNFHKVIIGLSG 301 + D A + + PL E E Y+ AC L D+++++ + LSG Sbjct: 301 VKVDFALSCHKDLLEPLSEPLEWKYHRPAEEISLGPACWLW--DFLRRSQQAGFFLPLSG 358 Query: 302 GIDSALCAAI----------AVDALGKE---NVQTIMLPYKYT----------------- 331 G+DSA A + AV +E +V+TI+ YT Sbjct: 359 GVDSAATACLVYSLCRQVCEAVKNGNQEVLADVRTIVNQISYTPQDPRELCGRILTTCYM 418 Query: 332 -----SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SG 376 S ++ A A+ +G + L I V + S P Sbjct: 419 ASENSSRETCNRATELAQQIGSHHIGLNIDPAVKAVVGIFSLVTGTSPLFAVQGGSSREN 478 Query: 377 IVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +N+Q+RIR + LS S+ ++L ++N E +GY T Y S NP Sbjct: 479 LALQNVQARIRMVVAYLFAQLSLWSRGARGGLLVLGSANVDESLLGYLTKYDCSSADINP 538 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQES 482 + + K+ + + L SIL +AEL P QTD+E Sbjct: 539 IGGISKSDLRAFVQFCIERFQLPAL--------QSILAAPATAELEPLTNGQVSQTDEED 590 Query: 483 L 483 + Sbjct: 591 M 591 >gi|170736682|ref|YP_001777942.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia MC0-3] gi|254249345|ref|ZP_04942665.1| hypothetical protein BCPG_04207 [Burkholderia cenocepacia PC184] gi|124875846|gb|EAY65836.1| hypothetical protein BCPG_04207 [Burkholderia cenocepacia PC184] gi|169818870|gb|ACA93452.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia MC0-3] Length = 275 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 19/193 (9%) Query: 35 RQGMDLILFTELFISGYPPEDLV--FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 R DL++F+E ++SG+P + V + SAI D H +V+G QD Sbjct: 33 RGNADLVIFSETYVSGFPTAENVAHLAEPLDGPSVSAIRAAARDAH---VAVVIGVAEQD 89 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFH----EKRTFISGYSNDPIVFRDIRLGIL 148 N+ +++D + +R Y + H + F +G + D +R +++G+L Sbjct: 90 DGRYFNTAILVDEFGELRLR-------YRKSHLYESDVGVFEAGGTFDVCEWRGVKVGML 142 Query: 149 ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQV 208 IC D+ + + L + GAE + + H + ++ V + V + + N+V Sbjct: 143 ICFDL-EFPETARALARAGAELIVIPDGMMQPHGHVHRKMIPVRALENQVFVAM--ANRV 199 Query: 209 GGQDELIFDGASF 221 G D F G S Sbjct: 200 GPGDRYTFSGESI 212 >gi|330981033|gb|EGH79136.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 264 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ D++GN+ + + + A QG L++ E+F+SGY + Sbjct: 1 MRVALYQCPPLPLDVSGNLTRLEQQAQAAAEQGAQLLICPEMFLSGYNIGAQAVGELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+P R + N+V ++D+ L NY + Sbjct: 61 QDGPAATRIAAIAQASGIAILYGYPERAAYRQIYNAVQLIDS-------QGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H +K F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSDLDKSMFAAGDDHYPVVELNGWRLGLLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 PY + + R H ++Y N G + + + G +S C DG + L Sbjct: 173 MLPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGAIRYCGLSSLCAPDGSRPL 224 >gi|71083836|ref|YP_266556.1| NH(3)-dependent NAD+ synthetase NadE [Candidatus Pelagibacter ubique HTCC1062] gi|71062949|gb|AAZ21952.1| NH(3)-dependent NAD+ synthetase NadE [Candidatus Pelagibacter ubique HTCC1062] Length = 228 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 15/154 (9%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQ---SLEDAAACAKALGCK 349 +IIG+SGGIDS++ + ++ ++TI+L P K S Q SL+ K Sbjct: 11 LIIGISGGIDSSVSSTLS----AMTGIKTIVLSMPIKQKSSQHDLSLKHQEWLVK----N 62 Query: 350 YDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +D + H + ++ F L S + N ++RIR L ++ +K +++ T NK Sbjct: 63 FDNVEAHTINLDKLFETFESTLSNFDSELGMANSRARIRMTTLYQVAAANKGIVVGTGNK 122 Query: 409 SE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 E VG+ T YGD +P+ D K++V+++ Sbjct: 123 VEDFGVGFYTKYGDGGVDISPIADCNKSEVWEIG 156 >gi|78066227|ref|YP_368996.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. 383] gi|77966972|gb|ABB08352.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. 383] Length = 304 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 11/217 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-VFKKS 61 K + +A Q+ ++ N+A A R A QG +L+L ELF Y D V Sbjct: 4 KHITVAAVQMASGNWNLEDNMATAERLIRAAAAQGANLVLCPELFAMPYFCLDQNVRHLE 63 Query: 62 FIQACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLP 118 Q + G GIV +GF + NS+ + DA G ++ V K ++P Sbjct: 64 LAQPFEGNAQIARFAALAGELGIVLPIGFFERAGNAAYNSIAVADADGRVLGVYRKTHIP 123 Query: 119 NYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS---L 174 + + EK F G + + R R+GI IC D W + L GAE L + Sbjct: 124 DGPGYTEKFYFTPGDTGFKVWDTRFGRIGIGICWDQWY-PETARSLALMGAEILCFPTII 182 Query: 175 NASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG 209 + P+ H + G + +P++ N++G Sbjct: 183 GSEPFSSAFDSSGHWQRTMQGHAAANMVPVVAANRIG 219 >gi|315654616|ref|ZP_07907522.1| NAD synthetase [Mobiluncus curtisii ATCC 51333] gi|315491080|gb|EFU80699.1| NAD synthetase [Mobiluncus curtisii ATCC 51333] Length = 671 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 17/138 (12%) Query: 294 KVIIGLSGGIDSALC---AAIAVDALG-KENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 +I+G+SGG+DS L A A D+ G K + T LP TS + +A A A+G Sbjct: 327 NIILGISGGLDSTLALLVATAARDSAGCKPEILTFTLPGFATSAHTKGNAQKLAAAVGVN 386 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSG-------IVAENIQSRIRGNILMALSNHSKAML 402 +++ I M P+G + EN+Q+ +R + L L+N + Sbjct: 387 CELIDIRPAATEMLKTMGH-----PAGHGEPVYDVTFENVQAGLRSDYLFRLANQRHGFV 441 Query: 403 LTTSNKSEISVGYGTLYG 420 L T + SE ++G+ T YG Sbjct: 442 LGTGDLSESALGW-TTYG 458 >gi|255327567|ref|ZP_05368633.1| NAD+ synthetase [Rothia mucilaginosa ATCC 25296] gi|255295241|gb|EET74592.1| NAD+ synthetase [Rothia mucilaginosa ATCC 25296] Length = 277 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 32/224 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ +++G+SGGIDS L +AVD L + T + LPY+ + E Sbjct: 36 DYLEATGSRGLVLGISGGIDSTLAGRLCQLAVDRLNERGRTTEFVAVRLPYRVQHDE--E 93 Query: 338 DAAACAKALG-CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DA + + + I + V+ F + + E+ S N+++R R A++ Sbjct: 94 DAQEALRFIQPTRSLTFNIAEAVDGFDTAYTDATGEQISDFNKGNVKARARMIAQYAIAG 153 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++ T + +E G+ T +GD PL L K Q QL L Sbjct: 154 GPGYLVVGTDHAAESITGFFTKFGDGGADLLPLAGLNKRQ-NQL---------------L 197 Query: 457 TEVIPPS--ILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 V+ S + K P+A+L P +TD++ L YP +DD ++ Sbjct: 198 LRVLGASERLWAKPPTADLLDGVPGRTDEDELGLTYPQIDDYLE 241 >gi|225077375|ref|ZP_03720574.1| hypothetical protein NEIFLAOT_02436 [Neisseria flavescens NRL30031/H210] gi|224951303|gb|EEG32512.1| hypothetical protein NEIFLAOT_02436 [Neisseria flavescens NRL30031/H210] Length = 262 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 10/167 (5%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+DY ++ ++G+SGGIDSA+ + + A +V + +P + S Q + A Sbjct: 14 LKDYAEQARAKGFVVGVSGGIDSAVVSTLV--AQTGLSVLLLEMPIRQKSDQ-VNRAQEH 70 Query: 343 AKALGCKYDVLPIH--DLVNHFFSLMSQFLQEE---PSGIVA-ENIQSRIRGNILMALSN 396 L +Y + DL F + E P+ +A N +SR+R L Sbjct: 71 MGRLKQRYPNVKAQSVDLTQTFDTFADTVDVSETEFPNKQLALANARSRLRMTTLYYYGQ 130 Query: 397 HSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 +++ T NK E VG+ T YGD +P+ DL KTQV+ LA+ Sbjct: 131 LHGLLVVGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYALAA 177 >gi|206977387|ref|ZP_03238283.1| putative hydrolase [Bacillus cereus H3081.97] gi|217961526|ref|YP_002340096.1| hydrolase, carbon-nitrogen family [Bacillus cereus AH187] gi|206744378|gb|EDZ55789.1| putative hydrolase [Bacillus cereus H3081.97] gi|217065132|gb|ACJ79382.1| hydrolase, carbon-nitrogen family [Bacillus cereus AH187] Length = 259 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 35 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 94 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 95 DGLETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 149 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 150 -FQLMDEHKYLIAGNRTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 207 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 208 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 251 >gi|91223365|ref|ZP_01258631.1| NAD synthetase [Vibrio alginolyticus 12G01] gi|91192178|gb|EAS78441.1| NAD synthetase [Vibrio alginolyticus 12G01] Length = 276 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 42/239 (17%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE------NVQTIMLPYKY 330 V ++ +Q+ +++G+SGG+DS C A +AVD L +E + LPY Sbjct: 25 VAFIKRKLQEAGCKSLVLGISGGVDSTTCGRLAQLAVDQLNEEAGNNSYQFIAVRLPY-- 82 Query: 331 TSPQSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VA 379 Q ED A A ++ K V +H +H + L + + + V Sbjct: 83 -GEQKDEDEAQLALSFIQPTHSVSVNIKAGVDGLHS-ASHVALEGTDLLPTDAAKVDFVK 140 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++R R ++ + ++L T + +E G+ T +GD + PL L K QV + Sbjct: 141 GNVKARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDMAPLFGLSKRQVRE 200 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 +A+ + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 201 VAATLGA--------------PEQLVKKVPTADLEELAPQKADEDALSLTYEQIDDFLE 245 >gi|331000424|ref|ZP_08324099.1| protein ExsB [Parasutterella excrementihominis YIT 11859] gi|329571756|gb|EGG53436.1| protein ExsB [Parasutterella excrementihominis YIT 11859] Length = 231 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 65/154 (42%), Gaps = 16/154 (10%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K I+ SGG+DS C A+AV LGKENV T+ Y + LE A A G ++ V Sbjct: 2 KAIVLSSGGVDSTTCLAMAVHELGKENVVTLSFEYGQRHCKELESAQKVADYYGVRHVVF 61 Query: 354 PIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNI---------LMALSNHSKAMLL 403 + + + SL+S ++ AE I G + LM + + A L Sbjct: 62 NLTQIFSFSNCSLLSTSTEKPVHESYAEQISKNGEGKVSTYVPFRNGLMLSAGAALAQSL 121 Query: 404 TTSNKSEISVG------YGTLYGDMSGGFNPLKD 431 K EI +G G Y D S GFN D Sbjct: 122 FPEEKCEIWIGAHADDAAGNAYADCSVGFNNAMD 155 >gi|288904692|ref|YP_003429913.1| NAD-synthetase [Streptococcus gallolyticus UCN34] gi|288731417|emb|CBI12969.1| NAD-synthetase [Streptococcus gallolyticus UCN34] Length = 274 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 36/229 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQ 334 L+DY++K++F K ++G+SGG DS+L A IAV+ L G ++ + I + Y Sbjct: 30 LKDYLKKHSFLKSYVLGISGGQDSSLAGRLAQIAVEELRAETGDDSYKFIAVRLPYGVQA 89 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGN 389 EDA K + ++ VN + Q + E +GI NI++R R Sbjct: 90 DEEDAQRALKFIQPDVSLV-----VNIKEGVDGQVRELEKAGIDVSDFNKGNIKARQRMI 144 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ + ++ T + +E G+ T +GD PL L K Q QL Sbjct: 145 TQYAIAGANSGAVIGTDHAAENITGFFTKFGDGGADIIPLYRLNKRQGKQL--------- 195 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P+I EK P+A+L RP D+ +L Y +DD ++ Sbjct: 196 LAELGA-----DPAIYEKIPTADLEENRPGIADEVALGVTYNDIDDYLE 239 >gi|149182943|ref|ZP_01861400.1| NAD(+) synthetase [Bacillus sp. SG-1] gi|148849335|gb|EDL63528.1| NAD(+) synthetase [Bacillus sp. SG-1] Length = 276 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ------TIMLPY-KYT 331 ++DY++KN+F K +++G+SGG DS L + AVD L +EN + LPY K Sbjct: 31 MKDYLKKNSFLKSLVLGISGGQDSTLVGKLAQKAVDELNEENGTDDYQFIAVRLPYGKQN 90 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 Q DA + K + I V+ + M + E S N ++R R + Sbjct: 91 DEQDALDAIEFIQP--SKSYTVNIKGAVDASAAAMKE-AGVELSDFTKGNEKARERMKVQ 147 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ +K ++L T + +E G+ T +GD + P +F+L + R + Sbjct: 148 YSMAAMNKGVVLGTDHSAEAVTGFYTKHGDGAADLVP--------IFRL-NKRQGKMLLK 198 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + K P+A+L RP D+++L Y +DD ++ Sbjct: 199 ELGA-----PEHLYTKVPTADLEDDRPLLPDEDALGVTYEEIDDFLE 240 >gi|118479239|ref|YP_896390.1| carbon-nitrogen family hydrolase [Bacillus thuringiensis str. Al Hakam] gi|118418464|gb|ABK86883.1| hydrolase, carbon-nitrogen family [Bacillus thuringiensis str. Al Hakam] Length = 259 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 11/178 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 171 >gi|226304067|ref|YP_002764025.1| hydrolase [Rhodococcus erythropolis PR4] gi|226183182|dbj|BAH31286.1| putative hydrolase [Rhodococcus erythropolis PR4] Length = 281 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 31/194 (15%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 ++L E+ +GY +LV ++ A D++ G +V G+P D + NS Sbjct: 45 IVLTPEMSATGYDIGELVSLRAE-PADGPIFDSVAEIARSAGIAVVYGYPELDGGDIYNS 103 Query: 100 VVILDAGNIIAVRDKINLPNYSE-----------FHEKRTFISGYSNDPIVFRDIRLGIL 148 V ++D RD +L +Y + F T + G+ F IR G+L Sbjct: 104 VQVVD-------RDGTSLAHYRKTHLFSTLDREHFRPGETLVVGFD-----FEGIRCGLL 151 Query: 149 ICEDIWKNSNICKHLKKQGAEFLFSLNA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 IC D+ + H G E+L +PY H ++V + + + YVN Sbjct: 152 ICYDVEFPEAVRAH-ADAGTEWLIVPTGLMTPYEHIA----QQVVPARAYESQMFVTYVN 206 Query: 207 QVGGQDELIFDGAS 220 + G + EL + G S Sbjct: 207 RCGAETELTYCGLS 220 >gi|110678808|ref|YP_681815.1| hydrolase, putative [Roseobacter denitrificans OCh 114] gi|109454924|gb|ABG31129.1| hydrolase, putative [Roseobacter denitrificans OCh 114] Length = 261 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 15/225 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 +K+A+ Q +P G IA + R A A QG D+++ E+F+ GY PE + + Sbjct: 1 MKLALWQTHPRTG-IAAALTALREAATSAATQGADVLITPEMFVGGYNIGPERIA---TH 56 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYS 121 + +D+L S +VVG N+ V++D G +A K +L + Sbjct: 57 ADHAAEVLDSLTSIAKTQDIALVVGLTLPAPPLPHNACVVIDNTGTQVARYHKTHL--FG 114 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + ++ F +G + + ++G+ IC D+ + + + L +GAE + + A+ Sbjct: 115 DV-DRAQFSAGAALSEVFDLAGWKVGLAICYDV-EFPELIRSLALRGAEVILTPTANMEP 172 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + + R +V + + + Y N +G + + ++G S C G Sbjct: 173 FDSINTR--LVPARAEENGVYVAYCNYIGAEAQFTYNGLS-CLSG 214 >gi|191638793|ref|YP_001987959.1| NAD synthetase [Lactobacillus casei BL23] gi|239632161|ref|ZP_04675192.1| NAD synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066846|ref|YP_003788869.1| NAD synthase [Lactobacillus casei str. Zhang] gi|238693000|sp|B3W8T2|NADE_LACCB RecName: Full=NH(3)-dependent NAD(+) synthetase gi|190713095|emb|CAQ67101.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus casei BL23] gi|239526626|gb|EEQ65627.1| NAD synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439253|gb|ADK19019.1| NAD synthase [Lactobacillus casei str. Zhang] gi|327382836|gb|AEA54312.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus casei LC2W] gi|327386022|gb|AEA57496.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus casei BD-II] Length = 275 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 46/244 (18%) Query: 273 EADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT-------- 323 E + V L+ Y++KN F K ++G+SGG DS+L A+ A+ + +T Sbjct: 21 ETEVRRSVDFLKAYLKKNTFLKTYVLGISGGQDSSLAGALTEKAMQEMRAETGDDAYQFI 80 Query: 324 -IMLPYKYTSPQSLEDAAAC--------AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 + LPY + ++ DA A K + K V + V S +S F + Sbjct: 81 AVRLPYGEQADEA--DAMAAIDFMHADVVKRVNIKPSVDAMVAAVEADGSKISDFNKG-- 136 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 NI++R+R A++ ++ ++ T + +E G+ T +GD PL L K Sbjct: 137 ------NIKARMRMIAQYAIAGNNAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLDK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P + EK+P+A+L RP D+ +L Y +D Sbjct: 191 ---------RQGAALLKVLGA-----PAHLYEKAPTADLEDNRPALPDEVALGVKYKDID 236 Query: 491 DIIK 494 D ++ Sbjct: 237 DYLE 240 >gi|260428208|ref|ZP_05782187.1| hydrolase in PqqF 5'region [Citreicella sp. SE45] gi|260422700|gb|EEX15951.1| hydrolase in PqqF 5'region [Citreicella sp. SE45] Length = 255 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 12/220 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFKKSFI 63 +K+A+ Q + G A R A G +++ ELF+ GY PE S Sbjct: 1 MKLALYQGPAISGATEEAFACIRTQLNGAAAAGAGMLVMPELFLPGYNQPE---MHGSLS 57 Query: 64 QACSSAIDT-LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 Q A +T L + H+ G G+ +G+ ++ + V N+ G ++ KI L + Sbjct: 58 QPRGGAWETRLAALAHEAGCGLTIGWAEREGDRVYNAATAFGPDGAVLGHYRKIQL--FG 115 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 E +F+ G + F ++ +LIC D+ ++ + L +QG + A+P Sbjct: 116 PM-EAASFVPGDAYCTFEFGGMKAALLICYDVEFAPHV-RALAEQGVSLVLVPTANPAGF 173 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 + ++ + V G+ + + L I+Y N G L F G S Sbjct: 174 DHVQ--NYTVPGRAAEMGLTIVYANYCGTDAGLPFGGRSL 211 >gi|228947756|ref|ZP_04110043.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228811743|gb|EEM58077.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 280 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIFFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGLETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|196034974|ref|ZP_03102381.1| hydrolase, carbon-nitrogen family [Bacillus cereus W] gi|218905171|ref|YP_002453005.1| hydrolase, carbon-nitrogen family [Bacillus cereus AH820] gi|228929084|ref|ZP_04092111.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229123558|ref|ZP_04252753.1| Carbon-nitrogen hydrolase [Bacillus cereus 95/8201] gi|195992513|gb|EDX56474.1| hydrolase, carbon-nitrogen family [Bacillus cereus W] gi|218535901|gb|ACK88299.1| hydrolase, carbon-nitrogen family [Bacillus cereus AH820] gi|228659693|gb|EEL15338.1| Carbon-nitrogen hydrolase [Bacillus cereus 95/8201] gi|228830374|gb|EEM75984.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 280 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 20 EKMKVACIQMDIFFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 79 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 80 DGLETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 134 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 135 -FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 192 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 193 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 236 >gi|320089948|pdb|3Q4G|A Chain A, Structure Of Nad Synthetase From Vibrio Cholerae gi|320089949|pdb|3Q4G|B Chain B, Structure Of Nad Synthetase From Vibrio Cholerae Length = 279 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 42/239 (17%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKY 330 V ++ + + + +++G+SGG+DS C A +AV+ L +++ T + LPY Sbjct: 28 VAFIKRKLTEARYKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPY-- 85 Query: 331 TSPQSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VA 379 Q ED A A ++ K V +H +H + + + +P+ + + Sbjct: 86 -GEQKDEDEAQLALSFIRPTHSVSVNIKAGVDGLHAASHHALA-NTGLIPSDPAKVDFIK 143 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++R R ++ + ++L T + +E G+ T +GD + PL L K QV Sbjct: 144 GNVKARARXVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRL 203 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 LA + P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 204 LAKTLGA--------------PEQLVYKTPTADLEELAPQKADEAALNLTYEQIDDFLE 248 >gi|322372036|ref|ZP_08046578.1| hydrolase-like protein [Haladaptatus paucihalophilus DX253] gi|320548458|gb|EFW90130.1| hydrolase-like protein [Haladaptatus paucihalophilus DX253] Length = 259 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 7/148 (4%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A Q P +G+ A NI E + ++ +F EL ++GY D+ + + Sbjct: 5 RVATCQFEPSLGETAANIESISELASELP-ETVEFAVFPELCVTGYDLTDVSTVATPVPG 63 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 D L + D G +VVG P D++ V NS+V +D ++A K L H Sbjct: 64 --PITDRLSAVARDSGVALVVGLPEADEKSVYNSLVYVDEHGVVATYRKRRLWGAEADH- 120 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDI 153 F +G + LG+L+C D+ Sbjct: 121 ---FEAGTGPVTVETPVGTLGLLLCYDL 145 >gi|320102903|ref|YP_004178494.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Isosphaera pallida ATCC 43644] gi|319750185|gb|ADV61945.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Isosphaera pallida ATCC 43644] Length = 298 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 44/243 (18%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY------------ 51 ++ IA Q+ P +G + N+++ R EEA QG L+ F E ++GY Sbjct: 7 EVTIAAVQMEPSLGRVEANVSEMLRLFEEAVDQGAKLVAFPECAVTGYGFESRAEGWEVS 66 Query: 52 PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGN 107 P D F++ C + D A VVG +D+ G + N+ V++ Sbjct: 67 EPRDGPSVSRFVEVCR------RRD-----AFAVVGTLERDETGPTPRLYNAAVLVGPQG 115 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKHLK 164 ++ K++LP F F+ + P + I++G+LIC D+ + L Sbjct: 116 VVDSYRKVHLP----FLGIDRFVDP-GDRPFAVVEAAGIKIGMLICYDV-SFPEAARVLT 169 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIY---VNQVGGQDELIFDGASF 221 +GAE L P H++ H I T H +IY VN+VG + F G S Sbjct: 170 LKGAELLVVPTNWP-THSECAAEHVIPT----RAHENVIYVMAVNRVGDERGFHFVGRSS 224 Query: 222 CFD 224 D Sbjct: 225 IVD 227 >gi|297564754|ref|YP_003683726.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Meiothermus silvanus DSM 9946] gi|296849203|gb|ADH62218.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Meiothermus silvanus DSM 9946] Length = 300 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 5/178 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ QL P G I N+ +A E + + E +++GY + V + + + Sbjct: 2 IRHAVLQLKPEKGQIRKNLQHIAQALSELRSYKPQVAVLPEAYLTGYFLQGGVRELAMTR 61 Query: 65 ACSSAIDTLKSDTHDGGA--GIVVGFPRQDQEGVLNSVVILDAGN--IIAVRDKINLPNY 120 S + + D G ++VGF D NS + G ++ V K+ LP Y Sbjct: 62 EELSERLGVMYQSLDWGEPLDLIVGFYELDSGVYYNSAAYFELGGRGLLHVHRKVFLPTY 121 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F E+R G R R+ +LICED W +S GAE L+ +ASP Sbjct: 122 GVFDEERYISRGNRIQAFDTRYGRVALLICEDFW-HSLTATIAALDGAEILYVPSASP 178 >gi|187919488|ref|YP_001888519.1| NAD synthetase [Burkholderia phytofirmans PsJN] gi|238691594|sp|B2TDV9|NADE_BURPP RecName: Full=NH(3)-dependent NAD(+) synthetase gi|187717926|gb|ACD19149.1| NAD+ synthetase [Burkholderia phytofirmans PsJN] Length = 286 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 38/235 (16%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTS 332 V L +Y++ + ++G+SGG+DS A +AV+ L E+ I LPY Sbjct: 33 VAFLANYLRSSGLKTYVLGISGGVDSTTAGRLAQLAVERLRAEHYDAHFVAIRLPYG--- 89 Query: 333 PQSLEDAAACAKAL-------GCKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQS 384 +D A +AL D+ P D + ++E V NI++ Sbjct: 90 --EQKDEADAQQALRFIRADENLTIDIKPAADAMLAALDQSGLLYKDESQQDFVHGNIKA 147 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R R A+++ +++ T + +E +G+ T +GD PL L K +V Sbjct: 148 RQRMIAQYAVASARAGVVIGTDHAAESVMGFFTKFGDGGADVLPLTGLNKRRV------- 200 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAE---LRPHQTDQESLP-PYPILDDIIKR 495 ++ LG P ++ K P+A+ LRP + D+++ PY +DD ++R Sbjct: 201 --RAVSKALG-----APEALAHKVPTADLEMLRPQRPDEDAYGIPYDAIDDFLER 248 >gi|209809394|ref|YP_002264932.1| NAD synthetase [Aliivibrio salmonicida LFI1238] gi|238059032|sp|B6ERM8|NADE_ALISL RecName: Full=NH(3)-dependent NAD(+) synthetase gi|208010956|emb|CAQ81361.1| NH(3)-dependent NAD(+) synthetase [Aliivibrio salmonicida LFI1238] Length = 276 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 42/236 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSP 333 ++ + ++ +I+G+SGG+DS C A IAV+ L KE+ + + LPY Sbjct: 28 IKSTLTQSGCKSLILGISGGVDSTTCGRLAQIAVNELNKESNSSDYQFIAVRLPYGI--- 84 Query: 334 QSLEDAAACAK---------ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENI 382 Q ED A A ++ K V +H NH + L I V N+ Sbjct: 85 QKDEDEAQLALEFIKPTHSISINIKDGVDGLHK-ANHLGLAHTGLLPTANDKIDFVKGNV 143 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R R ++ + ++L T + +E G+ T +GD + PL L K QV +A+ Sbjct: 144 KARARMIAQYEVAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRDVAA 203 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 204 ELGA--------------PEQLVKKVPTADLEELAPQKADEDALSVTYDEIDDFLE 245 >gi|40890263|gb|AAR97476.1| nitrilase [uncultured organism] Length = 329 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 20/172 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------- 52 M K ++ A Q+ P + AG + + A EA+ +G +LI+F E F+ YP Sbjct: 1 MPKTVRAAAVQIAPDLTSRAGTVERVLNAIAEASDKGAELIVFPETFVPWYPYFSFVLPP 60 Query: 53 ----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNI 108 PE L + + S+ + A IV+G +D + N+ +I DA Sbjct: 61 VQQGPEHLRLYEEAVTVPSAETRAVADAARKRNAVIVLGVNERDHGSLYNTQLIFDADGS 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 + ++ + P Y HE+ + G V R+G L C W++ N Sbjct: 121 LKLKRRKITPTY---HERMIWGQGDGAGLKVVETAIGRMGALAC---WEHYN 166 >gi|47565915|ref|ZP_00236954.1| nitrilase [Bacillus cereus G9241] gi|47557195|gb|EAL15524.1| nitrilase [Bacillus cereus G9241] Length = 259 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|257867338|ref|ZP_05646991.1| NAD synthase [Enterococcus casseliflavus EC30] gi|257873671|ref|ZP_05653324.1| NAD synthase [Enterococcus casseliflavus EC10] gi|257801394|gb|EEV30324.1| NAD synthase [Enterococcus casseliflavus EC30] gi|257807835|gb|EEV36657.1| NAD synthase [Enterococcus casseliflavus EC10] Length = 274 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 40/244 (16%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+ Y+QKN F H ++G+SGG DS L +A + G N Q I + Y Sbjct: 30 LKAYLQKNPFLHTFVLGISGGQDSTLAGRLAQLTMEEMRSETGNPNYQFIGVRLPYGEQA 89 Query: 335 SLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 EDA KAL + P +L VN ++ +Q E +G+ NI++R R Sbjct: 90 DEEDAK---KALAF---IQPDIELRVNIKAAVDAQVQAVEEAGLAVSDFNKGNIKARQRM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ +L T + +E G+ T YGD PL L K Q QL + + Sbjct: 144 ITQYAIAGEKAGAVLGTDHAAENITGFFTKYGDGGADILPLFRLNKRQGRQLLQYLGA-- 201 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 P ++ K P+A+L +P D+ +L Y +DD + K I + Sbjct: 202 ------------PEALYTKVPTADLEDGKPLVADEAALGVTYNDIDDYLEGKEISAEAQQ 249 Query: 503 FINN 506 I N Sbjct: 250 TIEN 253 >gi|297584170|ref|YP_003699950.1| NAD+ synthetase [Bacillus selenitireducens MLS10] gi|297142627|gb|ADH99384.1| NAD+ synthetase [Bacillus selenitireducens MLS10] Length = 274 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 36/263 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQ-------TIMLPYKYTS 332 L+ Y+Q + ++G+SGG DS L + AV L E+ + + LP Y S Sbjct: 28 LKRYLQGSGMKGYVLGISGGQDSLLAGLLIQKAVHELNDESAEASPYTFCAVRLP--YGS 85 Query: 333 PQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 Q DA +G + + I V+ E+ S V N ++R R + Sbjct: 86 QQDEADAQQAIDFIGPDQRITVNIRPAVDASIEAFRAAAGEDMSDFVKGNTKARERMKVQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 L H + +++ T + +E G+ T +GD + PL L K Q QL + + Sbjct: 146 YDLGAHFRFLVVGTDHAAEAVTGFYTKFGDGACDVAPLFGLTKGQGKQLLEYFGA----- 200 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 P K+P+A+L + D+ LP L + I + +D Y Sbjct: 201 ---------PALFYTKAPTADL---EDDKPQLPDEEALGLTYREI---DTYLTGSDISY- 244 Query: 512 DETVRYVEHLLYGSEYKRRQAPV 534 E+ +E +YG +RQ PV Sbjct: 245 -ESRERLES-MYGKTMHKRQLPV 265 >gi|116495282|ref|YP_807016.1| NAD synthetase [Lactobacillus casei ATCC 334] gi|227534698|ref|ZP_03964747.1| NAD synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|122263302|sp|Q037P8|NADE_LACC3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|116105432|gb|ABJ70574.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus casei ATCC 334] gi|227187454|gb|EEI67521.1| NAD synthetase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 275 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 46/244 (18%) Query: 273 EADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT-------- 323 E + V L+ Y++KN F K ++G+SGG DS+L A+ A+ + +T Sbjct: 21 ETEVRRSVDFLKAYLKKNTFLKTYVLGISGGQDSSLAGALTEKAMQEMRAETGDDAYQFI 80 Query: 324 -IMLPYKYTSPQSLEDAAAC--------AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 + LPY + ++ DA A K + K V + V S +S F + Sbjct: 81 AVRLPYGEQADEA--DAMAAIDFMHADVVKRVNIKPSVDAMVAAVEADGSKISDFNKG-- 136 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 NI++R+R A++ ++ ++ T + +E G+ T +GD PL L K Sbjct: 137 ------NIKARMRMIAQYAIAGNNAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLDK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P + EK+P+A+L RP D+ +L Y +D Sbjct: 191 ---------RQGAALLKVLGA-----PAHLYEKAPTADLEDNRPALPDEVALGVKYKDID 236 Query: 491 DIIK 494 D ++ Sbjct: 237 DYLE 240 >gi|330938513|gb|EGH42112.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 264 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 17/233 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ D++GN+ + + + A QG +++ E+F+SGY + Sbjct: 1 MRVALYQCPPLPLDVSGNLTRLEQQAQAAAEQGAQVLICPEMFLSGYNIGAQAVGELAQT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSE 122 A + + G I+ G+P R + N+V ++D+ G+ + K +L +SE Sbjct: 61 QDGPAATRIAAIAQASGIAILYGYPERAADRQIYNAVQLIDSQGSRLCNYRKTHL--FSE 118 Query: 123 FHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLNASPY 179 +K F +G + P+V RLG+LIC D+ N + L GAE + + N PY Sbjct: 119 L-DKSMFAAGEDHYPVVELNGWRLGLLICYDVEFPENT-RRLALAGAELILVPTANMLPY 176 Query: 180 -YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG-ASFCF-DGQQQL 229 + + R H ++Y N G + + + G +S C DG + L Sbjct: 177 DFVCDVTVRARAFEN-----HCYVVYTNYCGSEGAIRYCGLSSLCAPDGSRPL 224 >gi|325297940|ref|YP_004257857.1| N-carbamoylputrescine amidase [Bacteroides salanitronis DSM 18170] gi|324317493|gb|ADY35384.1| N-carbamoylputrescine amidase [Bacteroides salanitronis DSM 18170] Length = 295 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 42/272 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ I Q DI N+ K R + G DL++ EL + Y Sbjct: 1 MTRIIRAGIVQ-QSCSADIKTNLEKLHRNIASVAQAGADLVVLQELHNTPY--------- 50 Query: 61 SFIQACSSAIDTLKSDTHDGGAG-------------IVVGFPRQDQEGVLNSVVILDA-G 106 F Q +++ L G + F R+ N+ V+ D G Sbjct: 51 -FCQTEDTSLFDLAEPIPGPSTGFYSEIAAAYRIVLVTSLFERRAAGLYHNTAVVFDTDG 109 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 +I + K+++P+ ++EK F G +PI +LG+ +C D W + + Sbjct: 110 SIAGIYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSIGKLGVQVCWDQWYPEG-ARLMAL 168 Query: 166 QGAEFLFSLNASPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ 211 +GAE L A + KL++ +T Q H LP+I VN+VG GQ Sbjct: 169 KGAEILIYPTAIGWESTDTQEEKLRQTGAWITVQRGHAVANGLPVIAVNRVGLELDPSGQ 228 Query: 212 -DELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 + ++F G SF Q ++ Q + E+N + Sbjct: 229 TNGILFWGNSFVAGPQGEILAQASNTKEENLV 260 >gi|257877414|ref|ZP_05657067.1| NAD synthase [Enterococcus casseliflavus EC20] gi|257811580|gb|EEV40400.1| NAD synthase [Enterococcus casseliflavus EC20] Length = 274 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 40/244 (16%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+ Y+QKN F H ++G+SGG DS L +A + G N Q I + Y Sbjct: 30 LKAYLQKNPFLHTFVLGISGGQDSTLAGRLAQLTMEEMRSETGNPNYQFIGVRLPYGEQA 89 Query: 335 SLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 EDA KAL + P +L VN ++ +Q E +G+ NI++R R Sbjct: 90 DEEDAK---KALAF---IQPDIELRVNIKAAVDAQVQAVEEAGLAVSDFNKGNIKARQRM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ +L T + +E G+ T YGD PL L K Q QL + + Sbjct: 144 ITQYAIAGEKAGAVLGTDHAAENITGFFTKYGDGGADILPLFRLNKRQGRQLLQYLGA-- 201 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 P ++ K P+A+L +P D+ +L Y +DD + K I + Sbjct: 202 ------------PEALYTKVPTADLEDGKPLVADEAALGVTYNDIDDYLEGKEISAEAQQ 249 Query: 503 FINN 506 I N Sbjct: 250 TIEN 253 >gi|260947144|ref|XP_002617869.1| hypothetical protein CLUG_01328 [Clavispora lusitaniae ATCC 42720] gi|238847741|gb|EEQ37205.1| hypothetical protein CLUG_01328 [Clavispora lusitaniae ATCC 42720] Length = 323 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 12/121 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFK 59 +L++A Q NP++G + NI + + ++ +DLI+ EL +SGY P E F Sbjct: 2 RLRVACVQFNPLLGQVEANITRVKTLLSSVQKE-IDLIVLPELSLSGYNFSSPQEIKPFL 60 Query: 60 KSFIQ--ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKIN 116 + Q +CS A + K+ G V+G+P Q NS +++D GN++ K + Sbjct: 61 EDSTQGKSCSLARELCKT----YGCTTVIGYPETHQGTTYNSALVVDEEGNVVYNYRKTH 116 Query: 117 L 117 L Sbjct: 117 L 117 >gi|193065791|ref|ZP_03046854.1| NAD+ synthetase [Escherichia coli E22] gi|194428548|ref|ZP_03061087.1| NAD+ synthetase [Escherichia coli B171] gi|260844090|ref|YP_003221868.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O103:H2 str. 12009] gi|260855605|ref|YP_003229496.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O26:H11 str. 11368] gi|260868265|ref|YP_003234667.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O111:H- str. 11128] gi|192926563|gb|EDV81194.1| NAD+ synthetase [Escherichia coli E22] gi|194413426|gb|EDX29709.1| NAD+ synthetase [Escherichia coli B171] gi|257754254|dbj|BAI25756.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O26:H11 str. 11368] gi|257759237|dbj|BAI30734.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O103:H2 str. 12009] gi|257764621|dbj|BAI36116.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O111:H- str. 11128] gi|323153016|gb|EFZ39285.1| NAD+ synthetase [Escherichia coli EPECa14] gi|323158461|gb|EFZ44477.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli E128010] gi|323180519|gb|EFZ66064.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli 1180] Length = 275 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LTALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|284921659|emb|CBG34731.1| NH3-dependent NAD(+) synthetase [Escherichia coli 042] Length = 275 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASKQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNLPEQVARTIENWYLKTEHKRR 263 >gi|206971014|ref|ZP_03231965.1| hydrolase, carbon-nitrogen family [Bacillus cereus AH1134] gi|206733786|gb|EDZ50957.1| hydrolase, carbon-nitrogen family [Bacillus cereus AH1134] Length = 259 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V G++ NI A+ EA ++ D+I+ EL+ +GY L + K Sbjct: 1 MKVACIQMDIVFGEVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEISDKDG 60 Query: 63 IQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K + H G I +Q +GV N++ V+ + G ++ K++L + Sbjct: 61 VETKEKLIEWAKQYNVHIVGGSI----AKQTDQGVTNTMYVVNNEGQLVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDSNNVFAGHSLIVD 215 >gi|269966069|ref|ZP_06180159.1| NH(3)-dependent NAD(+) synthetase [Vibrio alginolyticus 40B] gi|269829216|gb|EEZ83460.1| NH(3)-dependent NAD(+) synthetase [Vibrio alginolyticus 40B] Length = 276 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 42/239 (17%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE------NVQTIMLPYKY 330 V ++ +Q+ +++G+SGG+DS C A +AVD L +E + LPY Sbjct: 25 VAFIKRKLQEAGCKSLVLGISGGVDSTTCGRLAQLAVDQLNEEAGNNSYQFIAVRLPY-- 82 Query: 331 TSPQSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VA 379 Q ED A A ++ K V +H +H + L + + + V Sbjct: 83 -GEQKDEDEAQLALSFIQPTHSVSVNIKAGVDGLHS-ASHVALEGTDLLPTDAAKVDFVK 140 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++R R ++ + ++L T + +E G+ T +GD + PL L K QV + Sbjct: 141 GNVKARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDMAPLFGLSKRQVRE 200 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 +A+ + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 201 VAATLGA--------------PEQLVKKVPTADLEELAPQKADEDALRLTYEQIDDFLE 245 >gi|162452096|ref|YP_001614463.1| NAD synthetase [Sorangium cellulosum 'So ce 56'] gi|161162678|emb|CAN93983.1| NAD(+) synthase (glutamine-hydrolyzing) [Sorangium cellulosum 'So ce 56'] Length = 324 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 79/197 (40%), Gaps = 49/197 (24%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK------ 349 ++G+SGGIDS++ + + V ALGK+ V I +P + TS +L A+ LG + Sbjct: 36 VVGISGGIDSSVVSTLCVRALGKDKVLGIFMPERDTSDDALRLGKLLAEGLGIEAVIENI 95 Query: 350 ---------YD--------VLPIHDLVNHFFSLMSQFLQE----------EPSG------ 376 Y+ V P ++ F + L+ +P G Sbjct: 96 KPALTGLRCYERQDEAIRMVYPDYNESWKFKITLPSILESDRLNVSQLTAQPPGEEPRVK 155 Query: 377 ----------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + A N + RIR + ++ + T N E G+ GD + F Sbjct: 156 RMPLNAYLQLVAATNFKQRIRKMMEYYHADRLNYAVAGTPNLLEYDQGFFVKQGDGAADF 215 Query: 427 NPLKDLYKTQVFQLASW 443 P+ LYK+QV+ LA + Sbjct: 216 KPIAHLYKSQVYALAEY 232 >gi|194433478|ref|ZP_03065756.1| NAD+ synthetase [Shigella dysenteriae 1012] gi|218689681|ref|YP_002397893.1| NAD synthetase [Escherichia coli ED1a] gi|218695298|ref|YP_002402965.1| NAD synthetase [Escherichia coli 55989] gi|218699693|ref|YP_002407322.1| NAD synthetase [Escherichia coli IAI39] gi|293446112|ref|ZP_06662534.1| NAD+ synthetase [Escherichia coli B088] gi|300818380|ref|ZP_07098590.1| NAD+ synthetase [Escherichia coli MS 107-1] gi|300938926|ref|ZP_07153627.1| NAD+ synthetase [Escherichia coli MS 21-1] gi|226723167|sp|B7NT37|NADE_ECO7I RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766710|sp|B7L6L4|NADE_ECO55 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766711|sp|B7MVL9|NADE_ECO81 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|194418241|gb|EDX34332.1| NAD+ synthetase [Shigella dysenteriae 1012] gi|218352030|emb|CAU97767.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli 55989] gi|218369679|emb|CAR17448.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli IAI39] gi|218427245|emb|CAR08135.2| NAD synthetase, NH3/glutamine-dependent [Escherichia coli ED1a] gi|291322942|gb|EFE62370.1| NAD+ synthetase [Escherichia coli B088] gi|300456125|gb|EFK19618.1| NAD+ synthetase [Escherichia coli MS 21-1] gi|300529020|gb|EFK50082.1| NAD+ synthetase [Escherichia coli MS 107-1] gi|320197924|gb|EFW72532.1| NAD synthetase [Escherichia coli EC4100B] gi|323968508|gb|EGB63914.1| NAD synthase [Escherichia coli M863] gi|323978078|gb|EGB73164.1| NAD synthase [Escherichia coli TW10509] gi|324007102|gb|EGB76321.1| NAD+ synthetase [Escherichia coli MS 57-2] gi|324119225|gb|EGC13113.1| NAD synthase [Escherichia coli E1167] gi|327252857|gb|EGE64511.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli STEC_7v] gi|332085918|gb|EGI91082.1| NH(3)-dependent NAD(+) synthetase [Shigella dysenteriae 155-74] Length = 275 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|215486957|ref|YP_002329388.1| NAD synthetase [Escherichia coli O127:H6 str. E2348/69] gi|312966940|ref|ZP_07781158.1| NAD+ synthetase [Escherichia coli 2362-75] gi|254766709|sp|B7USC1|NADE_ECO27 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|215265029|emb|CAS09416.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O127:H6 str. E2348/69] gi|312288404|gb|EFR16306.1| NAD+ synthetase [Escherichia coli 2362-75] Length = 275 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQKTGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|303257911|ref|ZP_07343920.1| ExsB protein [Burkholderiales bacterium 1_1_47] gi|302859254|gb|EFL82336.1| ExsB protein [Burkholderiales bacterium 1_1_47] Length = 231 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 17/168 (10%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K I+ SGG+DS C A+AV LGKENV T+ Y + LE A A G K+ V Sbjct: 2 KAIVLSSGGVDSTTCLAMAVHELGKENVVTLSFEYGQRHSKELEGAQKVADFYGVKHVVF 61 Query: 354 PIHDLVNHF-FSLMSQF----LQEEPSGIVAENIQSRIRG-----NILMALSNHSKAMLL 403 + + + SL+S + E + +A+N + ++ N LM + + A L Sbjct: 62 NLTQIFSFSNCSLLSNSTEKPVHESYADQIAKNGEGKVSTYVPFRNGLMLSAGAALAQSL 121 Query: 404 TTSNKSEISVG------YGTLYGDMSGGF-NPLKDLYKTQVFQLASWR 444 K EI +G G Y D S GF N + + + L S R Sbjct: 122 FPEEKCEIWIGAHADDAAGNAYADCSVGFNNAMNEAINIGTYGLVSLR 169 >gi|55377651|ref|YP_135501.1| nitrilase [Haloarcula marismortui ATCC 43049] gi|55230376|gb|AAV45795.1| nitrilase [Haloarcula marismortui ATCC 43049] Length = 272 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 95/236 (40%), Gaps = 23/236 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK----- 59 +++ +AQ + + N+++A A +A +G DL++ ELF GY D + Sbjct: 1 MRLTLAQTDVSSDSVTENVSRATTAIRDAAAEGADLVVLPELFSIGYFAFDRYAREAEGL 60 Query: 60 --KSFIQACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 ++ Q S A D S D A GF EG+ N+ V D G AV Sbjct: 61 NGETLSQVRSVAADHDVAVLAGSVVEDLAASADSGFDVPADEGLANTAVFFDRDGERRAV 120 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 K +L Y E + G + + F + +G+ C D+ + + +HL +G Sbjct: 121 YRKHHLFGYDS-AESQLLEPGETVPTVDFEEFTIGVTTCYDL-RFPELYRHLVDEGVTLT 178 Query: 172 FSLNASPY---YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +A PY H KL R V Q L + N VG +E G S +D Sbjct: 179 LVPSAWPYPRVEHWKLFGRARAVENQ-----LYVAAANGVGQFEEAELLGRSTVYD 229 >gi|333006847|gb|EGK26344.1| NH(3)-dependent NAD(+) synthetase [Shigella flexneri K-272] gi|333018764|gb|EGK38057.1| NH(3)-dependent NAD(+) synthetase [Shigella flexneri K-227] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LTALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNLPEQVARTIENWYLKTEHKRR 263 >gi|322368667|ref|ZP_08043234.1| nitrilase [Haladaptatus paucihalophilus DX253] gi|320551398|gb|EFW93045.1| nitrilase [Haladaptatus paucihalophilus DX253] Length = 266 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 100/239 (41%), Gaps = 32/239 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ+ GD+ N+ +A A E A +G DL+ E+F GY F Q Sbjct: 1 MKLALAQIAIDGGDVETNVRRATDAIESAAERGADLVALPEIFNVGY------FAFDTYQ 54 Query: 65 ACSSAID--TLK-----SDTHDGG---AGIVVGFPRQD-----QEGVLNSVVILDA-GNI 108 + A+D TL +D HD G IV D +EG+ N+ V D G Sbjct: 55 RNAEALDGPTLSRISDLADEHDIGVLAGSIVEDLSETDGETPSEEGLANTSVFFDRDGRR 114 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 AV K +L Y E E + G S F I +G+ C D+ + + + + + GA Sbjct: 115 KAVYRKHHLFGY-ESAEAEMLVPGESLGIAEFDGITVGMTTCYDL-RFPELYRDIAEAGA 172 Query: 169 EFLFSLNASPY---YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + +A PY H ++ R + Q + +N G ++ G S +D Sbjct: 173 TLVLVPSAWPYPRVEHWEVLTRARAIENQCF-----VAAINGSGSYEDATLIGRSSVYD 226 >gi|197123267|ref|YP_002135218.1| NAD synthetase [Anaeromyxobacter sp. K] gi|196173116|gb|ACG74089.1| NAD+ synthetase [Anaeromyxobacter sp. K] Length = 323 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 49/195 (25%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL----------------EDA 339 ++G+SGGIDS++ A++ V ALG + V +++P + +S +L ED Sbjct: 36 VVGMSGGIDSSVVASLCVRALGPDRVVGLLMPERDSSGDALRLGRMLAAHLGIRHVVEDI 95 Query: 340 AACAKALGC--------KYDVLPIHDLVNHFFSLMSQFLQE----------EPSG----- 376 A + LGC + V D +L S E +P G Sbjct: 96 APALEGLGCYARQLEAIRMAVPEYGDGWRCKLTLPSLLEGERLNITSLTVSDPRGSQRTV 155 Query: 377 ----------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + A N + R R + ++ + T N+ E G+ GD + F Sbjct: 156 RMPPAAYLQMVAATNFKQRTRKMMEYYHADRLNYAVAGTPNRLEYDQGFFVKQGDGAADF 215 Query: 427 NPLKDLYKTQVFQLA 441 P+ LYKTQV+ LA Sbjct: 216 KPIAHLYKTQVYALA 230 >gi|193068971|ref|ZP_03049930.1| NAD+ synthetase [Escherichia coli E110019] gi|192957766|gb|EDV88210.1| NAD+ synthetase [Escherichia coli E110019] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LTALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNVPEQVARTIENWYLKTEHKRR 263 >gi|26247993|ref|NP_754033.1| NAD synthetase [Escherichia coli CFT073] gi|110641860|ref|YP_669590.1| NAD synthetase [Escherichia coli 536] gi|191171747|ref|ZP_03033294.1| NAD+ synthetase [Escherichia coli F11] gi|227885836|ref|ZP_04003641.1| NAD(+) synthase [Escherichia coli 83972] gi|300987593|ref|ZP_07178265.1| NAD+ synthetase [Escherichia coli MS 200-1] gi|300994396|ref|ZP_07180901.1| NAD+ synthetase [Escherichia coli MS 45-1] gi|301050921|ref|ZP_07197771.1| NAD+ synthetase [Escherichia coli MS 185-1] gi|306815009|ref|ZP_07449165.1| NAD synthetase [Escherichia coli NC101] gi|331647232|ref|ZP_08348326.1| NAD+ synthetase [Escherichia coli M605] gi|46396450|sp|Q8FH06|NADE_ECOL6 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|123148028|sp|Q0TH90|NADE_ECOL5 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|26108396|gb|AAN80598.1|AE016761_173 NH(3)-dependent NAD(+) synthetase [Escherichia coli CFT073] gi|110343452|gb|ABG69689.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli 536] gi|190908077|gb|EDV67669.1| NAD+ synthetase [Escherichia coli F11] gi|222033493|emb|CAP76234.1| NH(3)-dependent Nad(+) synthetase [Escherichia coli LF82] gi|227837409|gb|EEJ47875.1| NAD(+) synthase [Escherichia coli 83972] gi|300297408|gb|EFJ53793.1| NAD+ synthetase [Escherichia coli MS 185-1] gi|300306073|gb|EFJ60593.1| NAD+ synthetase [Escherichia coli MS 200-1] gi|300406242|gb|EFJ89780.1| NAD+ synthetase [Escherichia coli MS 45-1] gi|305851657|gb|EFM52110.1| NAD synthetase [Escherichia coli NC101] gi|307553759|gb|ADN46534.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli ABU 83972] gi|312946340|gb|ADR27167.1| NAD synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|315290502|gb|EFU49876.1| NAD+ synthetase [Escherichia coli MS 153-1] gi|320194552|gb|EFW69183.1| NAD synthetase [Escherichia coli WV_060327] gi|324011480|gb|EGB80699.1| NAD+ synthetase [Escherichia coli MS 60-1] gi|330911544|gb|EGH40054.1| NAD synthetase [Escherichia coli AA86] gi|331044015|gb|EGI16151.1| NAD+ synthetase [Escherichia coli M605] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|161870234|ref|YP_001599404.1| NH(3)-dependent NAD synthetase [Neisseria meningitidis 053442] gi|161595787|gb|ABX73447.1| NH(3)-dependent NAD synthetase [Neisseria meningitidis 053442] gi|308389481|gb|ADO31801.1| NH(3)-dependent NAD synthetase [Neisseria meningitidis alpha710] gi|325136478|gb|EGC59084.1| NAD+ synthetase [Neisseria meningitidis M0579] gi|325201927|gb|ADY97381.1| NAD+ synthetase [Neisseria meningitidis M01-240149] gi|325208322|gb|ADZ03774.1| NAD+ synthetase [Neisseria meningitidis NZ-05/33] Length = 263 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N +IG+SGGIDSA+ + +A + T++L P + P LE A Sbjct: 14 LDEYATQANAKGFVIGVSGGIDSAVVSTLAA----RTGRPTLLLDMPIR-QHPGQLERAR 68 Query: 341 ACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 69 LHIRNLQRQYANVSAQTADLTDTFQTFEQTVGIHQTAFDNQPLSLA--NAKSRLRMLTLY 126 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 127 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 176 >gi|331683247|ref|ZP_08383848.1| NAD+ synthetase [Escherichia coli H299] gi|331079462|gb|EGI50659.1| NAD+ synthetase [Escherichia coli H299] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNLPEQVARTIENWYLKTEHKRR 263 >gi|222097484|ref|YP_002531541.1| hydrolase, carbon-nitrogen family [Bacillus cereus Q1] gi|221241543|gb|ACM14253.1| hydrolase, carbon-nitrogen family [Bacillus cereus Q1] Length = 295 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 13/226 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 +K+K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 35 EKMKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADR 94 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLP 118 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L Sbjct: 95 DGLETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL- 149 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 150 -FQLMDEHKYLIAGNRTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWP 207 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 208 LV--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 251 >gi|218676056|ref|YP_002394875.1| NAD synthetase [Vibrio splendidus LGP32] gi|254766725|sp|B7VQP3|NADE_VIBSL RecName: Full=NH(3)-dependent NAD(+) synthetase gi|218324324|emb|CAV25662.1| NAD synthase [Vibrio splendidus LGP32] Length = 276 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 42/236 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQ--TIMLPYKYTSP 333 ++ +Q++ +I+G+SGG+DS C A +AVD+L G + Q + LPY Sbjct: 28 IKTKLQQSGCKSLILGISGGVDSTTCGRLAQMAVDSLNESAGSDEYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENI 382 Q ED A A ++ K V +H +H + L + + I V N+ Sbjct: 85 QKDEDEAQLALSFIQPSQSVSVNIKAGVDGLH-AASHVALEGTGLLPTDSAKIDFVKGNV 143 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R R ++ + +++ T + +E G+ T +GD + PL L K QV +LA+ Sbjct: 144 KARARMIAQYEIAGYVGGLVIGTDHSAENITGFYTKHGDGACDLAPLFGLNKRQVRELAA 203 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + P +++K P+A EL P + D+ +L Y +DD ++ Sbjct: 204 TLGA--------------PEQLVKKVPTADLEELDPQKADEAALNLSYDQIDDFLE 245 >gi|170680478|ref|YP_001743509.1| NAD synthetase [Escherichia coli SMS-3-5] gi|218705238|ref|YP_002412757.1| NAD synthetase [Escherichia coli UMN026] gi|293405238|ref|ZP_06649230.1| nadE [Escherichia coli FVEC1412] gi|298380881|ref|ZP_06990480.1| NAD+ synthase [Escherichia coli FVEC1302] gi|300898470|ref|ZP_07116808.1| NAD+ synthetase [Escherichia coli MS 198-1] gi|331663220|ref|ZP_08364130.1| NAD+ synthetase [Escherichia coli TA143] gi|331673287|ref|ZP_08374055.1| NAD+ synthetase [Escherichia coli TA280] gi|226723580|sp|B7N576|NADE_ECOLU RecName: Full=NH(3)-dependent NAD(+) synthetase gi|226724348|sp|B1LDZ1|NADE_ECOSM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|170518196|gb|ACB16374.1| NAD+ synthetase [Escherichia coli SMS-3-5] gi|218432335|emb|CAR13225.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli UMN026] gi|291427446|gb|EFF00473.1| nadE [Escherichia coli FVEC1412] gi|298278323|gb|EFI19837.1| NAD+ synthase [Escherichia coli FVEC1302] gi|300357855|gb|EFJ73725.1| NAD+ synthetase [Escherichia coli MS 198-1] gi|331059019|gb|EGI30996.1| NAD+ synthetase [Escherichia coli TA143] gi|331069485|gb|EGI40872.1| NAD+ synthetase [Escherichia coli TA280] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNLPEQVARTIENWYLKTEHKRR 263 >gi|325977613|ref|YP_004287329.1| NAD synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177541|emb|CBZ47585.1| NAD synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 274 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 36/229 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQ 334 L+DY++K++F K ++G+SGG DS+L A IAV+ L G ++ + I + Y Sbjct: 30 LKDYLKKHSFLKSYVLGISGGQDSSLAGRLAQIAVEELRAETGDDSYKFIAVRLPYGVQA 89 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGN 389 EDA K + + VN + Q + E +GI NI++R R Sbjct: 90 DEEDAQRALKFIQPDVSIA-----VNIKEGVDGQVRELEKAGIDVSDFNKGNIKARQRMI 144 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ + ++ T + +E G+ T +GD PL L K Q QL Sbjct: 145 TQYAVAGANSGAVIGTDHAAENITGFFTKFGDGGADVIPLYRLNKRQGKQL--------- 195 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P+I EK P+A+L RP D+ +L Y +DD ++ Sbjct: 196 LAELGA-----DPAIYEKIPTADLEENRPGIADEVALGVTYNDIDDYLE 239 >gi|325272800|ref|ZP_08139141.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas sp. TJI-51] gi|324102069|gb|EGB99574.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas sp. TJI-51] Length = 298 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 18/232 (7%) Query: 2 LKKLKIAIAQLNPVVG--DIAGNIAKARRAREEANRQGMDLILFTELFISGYP---PEDL 56 + ++IA+ Q +P VG GN+++ A R+G +LI+ EL +GY + Sbjct: 8 VSPVRIAVIQYDPQVGLEYCDGNLSRGLALARRAVREGANLIVLPELANTGYTFHSRAEA 67 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 +QA S + + + GF ++ + +S V+ ++ K + Sbjct: 68 YAHAETLQAGRS-LKAWADFAREYQVYLAAGFAEREGLKLYDSAVLFGPDGLLGHYRKAH 126 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 L N EK F G P+ I R+G+LIC DIW + + + QGA+ + SLN Sbjct: 127 LWN----QEKLWFTPGDLGFPVFETPIGRIGLLICWDIWF-PEVPRLMAAQGADIICSLN 181 Query: 176 -----ASPYYHNKLKKRHEIVTGQISHV-HLPIIYVNQVGGQDELIFDGASF 221 P + + +T +HV ++ I N++G + F G S Sbjct: 182 NWVWTPPPLFDETGRCMASYLTMTAAHVNNVYIAAANRIGSERGGRFLGCSL 233 >gi|220918056|ref|YP_002493360.1| NAD+ synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955910|gb|ACL66294.1| NAD+ synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 323 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 49/195 (25%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL----------------EDA 339 ++G+SGGIDS++ A++ V ALG + V +++P + +S +L ED Sbjct: 36 VVGMSGGIDSSVVASLCVRALGADRVVGLLMPERDSSGDALRLGRMLAAHLGIRHVVEDI 95 Query: 340 AACAKALGC--------KYDVLPIHDLVNHFFSLMSQFLQE----------EPSG----- 376 A + LGC + V D +L S E +P G Sbjct: 96 APALEGLGCYARQLEAIRMAVPEYGDGWRCKLTLPSLLEGERLNITSLTVSDPRGTQRTV 155 Query: 377 ----------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + A N + R R + ++ + T N+ E G+ GD + F Sbjct: 156 RMPPAAYLQMVAATNFKQRTRKMMEYYHADRLNYAVAGTPNRLEYDQGFFVKQGDGAADF 215 Query: 427 NPLKDLYKTQVFQLA 441 P+ LYKTQV+ LA Sbjct: 216 KPIAHLYKTQVYALA 230 >gi|91210955|ref|YP_540941.1| NAD synthetase [Escherichia coli UTI89] gi|117623912|ref|YP_852825.1| NAD synthetase [Escherichia coli APEC O1] gi|218558608|ref|YP_002391521.1| NAD synthetase [Escherichia coli S88] gi|237705690|ref|ZP_04536171.1| NH(3)-dependent NAD(+) synthetase [Escherichia sp. 3_2_53FAA] gi|331657776|ref|ZP_08358738.1| NAD+ synthetase [Escherichia coli TA206] gi|122423593|sp|Q1RB54|NADE_ECOUT RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030445|sp|A1ABS1|NADE_ECOK1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|226723166|sp|B7MAV1|NADE_ECO45 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|91072529|gb|ABE07410.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli UTI89] gi|115513036|gb|ABJ01111.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli APEC O1] gi|218365377|emb|CAR03100.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli S88] gi|226900447|gb|EEH86706.1| NH(3)-dependent NAD(+) synthetase [Escherichia sp. 3_2_53FAA] gi|294490740|gb|ADE89496.1| NAD+ synthetase [Escherichia coli IHE3034] gi|307626775|gb|ADN71079.1| NAD synthetase [Escherichia coli UM146] gi|315286410|gb|EFU45845.1| NAD+ synthetase [Escherichia coli MS 110-3] gi|315299806|gb|EFU59046.1| NAD+ synthetase [Escherichia coli MS 16-3] gi|323952246|gb|EGB48119.1| NAD synthase [Escherichia coli H252] gi|323956566|gb|EGB52305.1| NAD synthase [Escherichia coli H263] gi|331056024|gb|EGI28033.1| NAD+ synthetase [Escherichia coli TA206] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNVPEQVARTIENWYLKTEHKRR 263 >gi|297250334|ref|ZP_06864109.2| NAD+ synthetase [Neisseria polysaccharea ATCC 43768] gi|296839171|gb|EFH23109.1| NAD+ synthetase [Neisseria polysaccharea ATCC 43768] Length = 273 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 18/182 (9%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PY 328 + +A V L +Y + N ++G+SGGIDSA+ +A+A + T++L P Sbjct: 12 DTQAVITHIVRWLDEYAAQANAKGFVVGVSGGIDSAVVSALAA----RTGRTTLLLDMPI 67 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAE 380 + Q LE A + L +Y + DL + F + +P + Sbjct: 68 RQHHDQ-LERARRHIRNLQGQYANVSAQTVDLTDTFQTFEQTVGVHQTAFDSQPLSLA-- 124 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N +SR+R L ++ T NK E VG+ T YGD +P+ DL KTQV++ Sbjct: 125 NARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYR 184 Query: 440 LA 441 LA Sbjct: 185 LA 186 >gi|191169567|ref|ZP_03031291.1| NAD+ synthetase [Escherichia coli B7A] gi|309793513|ref|ZP_07687940.1| NAD+ synthetase [Escherichia coli MS 145-7] gi|190900389|gb|EDV60214.1| NAD+ synthetase [Escherichia coli B7A] gi|308123100|gb|EFO60362.1| NAD+ synthetase [Escherichia coli MS 145-7] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNVPEQVARTIENWYLKTEHKRR 263 >gi|330812176|ref|YP_004356638.1| hydrolase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380284|gb|AEA71634.1| putative hydrolase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 264 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 27/227 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-PEDLVFKKSFI 63 +++A+ Q P+ D AGN+ + + EA +G D+++ E+F++GY D V + + Sbjct: 1 MRVALYQCPPLPLDPAGNLQRLHQVALEA--RGADVLVLPEMFMTGYNIGVDAVNVLAEV 58 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSE 122 A + G IV G+P + ++G + N+V ++DA L NY + Sbjct: 59 YNGEWA-QQIARIAKAAGLAIVYGYPERGEDGQIYNAVQLIDA-------QGERLANYRK 110 Query: 123 FH-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SL 174 H + F +G + PIV +LG+LIC D+ N + L G E + + Sbjct: 111 SHLFGDLDHAMFSAGDAALPIVELNGWKLGLLICYDLEFPEN-ARRLALAGTELILVPTA 169 Query: 175 NASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 N PY + + R + Q + Y N G + EL + G S Sbjct: 170 NMQPYEFIADVTVRARAIENQCF-----VAYANYCGHEGELQYCGQS 211 >gi|118468846|ref|YP_889888.1| hydrolase, carbon-nitrogen family protein [Mycobacterium smegmatis str. MC2 155] gi|118170133|gb|ABK71029.1| hydrolase, carbon-nitrogen family protein [Mycobacterium smegmatis str. MC2 155] Length = 281 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 6/172 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL+++ + V+GD+ GN+A+ A G L + EL SGY D+ + Sbjct: 1 MNRKLRVSAVTPDIVIGDLDGNLARLHNALRAIEWTGPYLAVLPELATSGYVFTDIDEAR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + A T +D VVGF D + + NS +++ G ++ K +L Sbjct: 61 ALSLRADDARLTALADDVPADCVAVVGFAEVDGDTLYNSAIVIGDGKVVGTYRKAHL--- 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL 171 E F +G ++ I RLG+ IC D + + + L +GAE L Sbjct: 118 -WAAEPEIFATGVEAGTVIDTAICRLGVAICYDN-EFPELPRRLALRGAEVL 167 >gi|306832871|ref|ZP_07466005.1| NAD+ synthetase [Streptococcus bovis ATCC 700338] gi|304425010|gb|EFM28142.1| NAD+ synthetase [Streptococcus bovis ATCC 700338] Length = 274 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 40/231 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ------TIMLPYKYTS 332 L+DY++K++F K ++G+SGG DS+L A IAV+ L E + LPY + Sbjct: 30 LKDYLKKHSFLKSYVLGISGGQDSSLAGRLAQIAVEELRAETGDDSYKFVAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIR 387 + EDA K + ++ VN + Q + E +GI NI++R R Sbjct: 90 DE--EDAQRALKFIQPDVSLV-----VNIKEGVDGQVRELEKAGIDVSDFNKGNIKARQR 142 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ + ++ T + +E G+ T +GD PL L K Q QL Sbjct: 143 MITQYAVAGANSGAVIGTDHAAENITGFFTKFGDGGADVIPLYRLNKRQGKQL------- 195 Query: 448 GITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P+I EK P+A+L RP D+ +L Y +DD ++ Sbjct: 196 --LAELGA-----DPAIYEKIPTADLEENRPGIADEVALGVTYNDIDDYLE 239 >gi|260778098|ref|ZP_05886991.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vibrio coralliilyticus ATCC BAA-450] gi|260606111|gb|EEX32396.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vibrio coralliilyticus ATCC BAA-450] Length = 319 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KKLK+A Q N GD A N + ++ +A QG++LI F E+ ISGY + + + Sbjct: 1 MKKLKVASVQFNHHAGDKAYNFSTIKKFVYDAQTQGVELITFPEMCISGYWHLNTLERHE 60 Query: 62 FIQACSSAIDTLKSD-----THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 Q + + S + + G I G D +G L + IL A+ D Sbjct: 61 IEQQAEAVPNGPSSQALLELSRETGITIGAGLIEIDADGNLYNTFIL------AMSDG-Q 113 Query: 117 LPNYSEFHEKRTFISGY--SNDPIVFRDI----RLGILICEDIWKNSNICKHLK---KQG 167 + + + H TF+S Y S + D R+GILIC W N N+ ++++ +G Sbjct: 114 ITKHRKLH---TFVSQYMSSGNEYTVVDTPHGWRVGILIC---WDN-NLVENVRITALKG 166 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 A+ L + + + H++ ++ Q+ H Sbjct: 167 ADLLLAPHQTGGCHSRSPNAMGLIDPQLWH 196 >gi|300917696|ref|ZP_07134345.1| NAD+ synthetase [Escherichia coli MS 115-1] gi|300415097|gb|EFJ98407.1| NAD+ synthetase [Escherichia coli MS 115-1] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQSLREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|74311941|ref|YP_310360.1| NAD synthetase [Shigella sonnei Ss046] gi|157157598|ref|YP_001463036.1| NAD synthetase [Escherichia coli E24377A] gi|209919101|ref|YP_002293185.1| NAD synthetase [Escherichia coli SE11] gi|256018067|ref|ZP_05431932.1| NAD synthetase [Shigella sp. D9] gi|300924786|ref|ZP_07140727.1| NAD+ synthetase [Escherichia coli MS 182-1] gi|301327474|ref|ZP_07220708.1| NAD+ synthetase [Escherichia coli MS 78-1] gi|307310688|ref|ZP_07590334.1| NAD+ synthetase [Escherichia coli W] gi|332279107|ref|ZP_08391520.1| NH(3)-dependent NAD(+) synthetase [Shigella sp. D9] gi|123617275|sp|Q3Z287|NADE_SHISS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030443|sp|A7ZMK7|NADE_ECO24 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238064810|sp|B6IBG0|NADE_ECOSE RecName: Full=NH(3)-dependent NAD(+) synthetase gi|73855418|gb|AAZ88125.1| NAD synthetase [Shigella sonnei Ss046] gi|157079628|gb|ABV19336.1| NAD+ synthetase [Escherichia coli E24377A] gi|209912360|dbj|BAG77434.1| NAD synthase [Escherichia coli SE11] gi|300419039|gb|EFK02350.1| NAD+ synthetase [Escherichia coli MS 182-1] gi|300845951|gb|EFK73711.1| NAD+ synthetase [Escherichia coli MS 78-1] gi|306908866|gb|EFN39362.1| NAD+ synthetase [Escherichia coli W] gi|315061043|gb|ADT75370.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli W] gi|323175186|gb|EFZ60800.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli LT-68] gi|323186243|gb|EFZ71595.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli 1357] gi|323378384|gb|ADX50652.1| NAD+ synthetase [Escherichia coli KO11] gi|323948133|gb|EGB44123.1| NAD synthase [Escherichia coli H120] gi|324016495|gb|EGB85714.1| NAD+ synthetase [Escherichia coli MS 117-3] gi|332101459|gb|EGJ04805.1| NH(3)-dependent NAD(+) synthetase [Shigella sp. D9] Length = 275 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|323169375|gb|EFZ55051.1| NAD+ synthetase [Shigella sonnei 53G] Length = 275 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREADIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|15613610|ref|NP_241913.1| hypothetical protein BH1047 [Bacillus halodurans C-125] gi|10173662|dbj|BAB04766.1| BH1047 [Bacillus halodurans C-125] Length = 271 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 24/281 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQG--MDLILFTELFISGYPPEDLVFKKSF 62 +K+A+ Q++ + GD GN K + E+ +Q DL++ E++ + Y + L Sbjct: 1 MKVALYQMDILPGDPRGNERKVKEWIEDVMQQEDVPDLLVLPEMWTTAYTLDQLEHLAEG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILD-AGNIIAVRDKINL-PN 119 + + LK + IV G + ++G L N ++ D G+ + DKI+L P Sbjct: 61 EERYTELF--LKELAREHNVNIVAGSIAKKEKGKLYNRALVFDRRGHTVYQYDKIHLVPM 118 Query: 120 YSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 SE +++G VF ++G++IC D+ + + + L +GAE +F + Sbjct: 119 LSE----PDYLTGGDAAASVFELEGTKMGLVICYDL-RFPELMRSLALEGAEIVFIVAEW 173 Query: 178 P---YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 P H ++ +R + Q S+V I N+VG + F G S D + Q Sbjct: 174 PEARAVHWEVLQRARAIENQ-SYV----ISCNRVGAYAGVTFAGRSMVIDPWGDVLIQGS 228 Query: 235 HFSEQNFMTEWHYDQ--QLSQWNYMSDDSASTMYIPLQEEE 273 EQ T+ + D+ ++ + + T Y PL +E+ Sbjct: 229 RDQEQTLTTKLNPDKVSEVREAVPIFQSRVPTKYKPLHKED 269 >gi|256822350|ref|YP_003146313.1| N-carbamoylputrescine amidase [Kangiella koreensis DSM 16069] gi|256795889|gb|ACV26545.1| N-carbamoylputrescine amidase [Kangiella koreensis DSM 16069] Length = 285 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 19/275 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VF 58 ++ + A Q V + NIAK ++A QG + IL ELF Y +D F Sbjct: 1 MRNVTFAATQF-AVSANFDENIAKGEALVKQAAEQGANAILLQELFAGYYWCKDQDPKYF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + S + + G + + + + NS+ ++DA G I+ K+++ Sbjct: 60 DWAEPYPSSRVLQHFSTVAKQLGVVLPISYFEKAGNAHFNSLAMIDADGTIMDNYRKMHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + R+G IC D W + L QGAE ++ + Sbjct: 120 PDGHGYQEKFYFSPGDTGFKVWDTKFGRMGAAICWDQW-FPEAARILALQGAEVIYYPTA 178 Query: 174 LNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFDGQQ 227 + + P N + H ++ G +P++ N+VG + + F G+SF D Sbjct: 179 IGSEPQDPNWDSREHWQRVMQGHSGANMVPVVASNRVGTEQGDTCGITFYGSSFITDPFG 238 Query: 228 QLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSD 259 +M SE E+ DQ Q + W D Sbjct: 239 AKIQEMDKTSEGVICQEFDLDQVAKQRASWGLFRD 273 >gi|283458891|ref|YP_003363538.1| NAD synthase [Rothia mucilaginosa DY-18] gi|283134953|dbj|BAI65718.1| NAD synthase [Rothia mucilaginosa DY-18] Length = 277 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 32/224 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ +++G+SGGIDS L +AVD L + T + LPY+ + E Sbjct: 36 DYLEATGSRGLVLGISGGIDSTLAGRLCQLAVDRLNERGRTTEFVAVRLPYRVQHDE--E 93 Query: 338 DAAACAKALG-CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DA + + + I + V+ F + + E+ S N+++R R A++ Sbjct: 94 DAQEALRFIQPTRSLTFNIAEAVDGFDTAYAAATGEQMSDFNKGNVKARARMIAQYAIAG 153 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++ T + +E G+ T +GD PL L K Q QL L Sbjct: 154 GPGYLVVGTDHAAESITGFFTKFGDGGADLLPLYGLNKRQ-NQL---------------L 197 Query: 457 TEVIPPS--ILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 V+ S + K P+A+L P +TD++ L YP +DD ++ Sbjct: 198 LRVLGASERLWAKPPTADLLDGVPGRTDEDELGLTYPQIDDYLE 241 >gi|229589669|ref|YP_002871788.1| putative hydrolase [Pseudomonas fluorescens SBW25] gi|229361535|emb|CAY48411.1| putative hydrolase [Pseudomonas fluorescens SBW25] Length = 295 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 15/204 (7%) Query: 6 KIAIAQLNPVVG--DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKS 61 ++A+ QL+P VG + A N+ ++ EA G +LI+ EL GY F + Sbjct: 9 RVAVIQLDPQVGMNNRANNLHQSLALATEAANGGANLIVLPELTNCGYFFSSRQDAFDHA 68 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + +++ +V G D + N+ V+L I K +L N Sbjct: 69 ELVPDGTSVQAWIDFACRHQVYLVAGLCEIDGMQLFNTAVLLGPDGFIGKYRKAHLWNL- 127 Query: 122 EFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLN----- 175 EK F G + P+ I R+G+LIC DIW + + L +QGA+ + SLN Sbjct: 128 ---EKLWFTPGNTGFPVFETPIGRIGLLICWDIWF-PEVPRILGQQGADIICSLNNWVWT 183 Query: 176 ASPYYHNKLKKRHEIVTGQISHVH 199 P + K +T +HV+ Sbjct: 184 PPPLFDEAGKCMASYLTMTAAHVN 207 >gi|83644860|ref|YP_433295.1| amidohydrolase [Hahella chejuensis KCTC 2396] gi|83632903|gb|ABC28870.1| predicted amidohydrolase [Hahella chejuensis KCTC 2396] Length = 262 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 17/168 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KIA AQ PV GD+ N + + A +G ++++F EL ++GY P DL + Sbjct: 14 MQGDFKIAAAQFGPVRGDVEENTRRHLQLIAAAVAEGANVVIFPELSLTGYEP-DLAREL 72 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F A S ++ + G ++VG P + +EG + + + + +Y Sbjct: 73 AFTDA-DSRWAPFQAVAREQGVTLMVGAPVRMEEGEPQV-------GLFVISPETPVFHY 124 Query: 121 SEFH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 S+ H E + F G + + LG+ IC D + + H + Sbjct: 125 SKMHLHPGEDQHFAPGAGEKVFELQGVALGLAICAD----TGVATHAR 168 >gi|254931173|ref|ZP_05264532.1| hydrolase [Listeria monocytogenes HPB2262] gi|254992675|ref|ZP_05274865.1| hypothetical protein LmonocytoFSL_06146 [Listeria monocytogenes FSL J2-064] gi|293582720|gb|EFF94752.1| hydrolase [Listeria monocytogenes HPB2262] gi|328475498|gb|EGF46257.1| hypothetical protein LM220_12837 [Listeria monocytogenes 220] gi|332311197|gb|EGJ24292.1| Hydrolase [Listeria monocytogenes str. Scott A] Length = 296 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 29/269 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I S+ + TLK + GI + + ++ + N+ +I+D Sbjct: 61 PLATDFDNERTKWLNEAITEDSAYVLTLKELAKELQIGICATYLSKTEQKIQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +GAE + NA +P N+L R E + G ++ + P + ++FD Sbjct: 177 LKGAEIILVPNACDINPARLNQLNSRAFENMVG-VAMANYPGEKWGRSTAFSPIVFDENG 235 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D + + + SE F+ E++ D+ Sbjct: 236 ---DYRDNTIIETEDVSEGIFIAEFNLDE 261 >gi|308481129|ref|XP_003102770.1| hypothetical protein CRE_30006 [Caenorhabditis remanei] gi|308260856|gb|EFP04809.1| hypothetical protein CRE_30006 [Caenorhabditis remanei] Length = 713 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/245 (20%), Positives = 99/245 (40%), Gaps = 27/245 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++ ++A +N D GN + + EA+ + L EL I GY D F+ Sbjct: 6 RRCRVATCTVNNWALDFRGNYERIVKTCSEASELEARIRLGPELEIPGYGCADHFFELDT 65 Query: 63 IQACSSAIDTLKSDTHDGGAGIVV-GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + L + + +V+ G P + + + N G ++ +R K+ L + + Sbjct: 66 ERHSWEMLSKLVEKSKEWPNLLVITGLPTRFRGLLYNCAAAFKNGRLLFIRAKMGLADDN 125 Query: 122 EFHEKRTFISG----------------YSNDPIVFRD--------IRLGILICEDIWKNS 157 + E R F+ + + F D +R+G ICE++W Sbjct: 126 VYRESRWFVKWTETFKHYQMPLNSEFYFEQSYVPFGDGILESSDNVRVGFEICEELWSAR 185 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 + L +QG + + + + S + K R ++++ G + V +Y N G D + Sbjct: 186 STNIRLSEQGVDIMCNGSGSHHILGKSNYRINQLILGSSAKVGGVYLYANHRGCDGDRVY 245 Query: 216 FDGAS 220 +DGAS Sbjct: 246 YDGAS 250 >gi|254495066|ref|ZP_05107990.1| NAD synthase [Polaribacter sp. MED152] gi|85819416|gb|EAQ40573.1| NAD synthase [Polaribacter sp. MED152] Length = 262 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 21/172 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSAL----CAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L+DY ++G+SGGIDSAL CA + L E +P + Q + Sbjct: 14 LKDYATNAGVKGFVVGVSGGIDSALTSTLCAKTGLPTLCVE------MPIHQAASQ-VSR 66 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS-------GIVAENIQSRIRGNIL 391 A L ++D ++++ S F P+ + N ++R+R L Sbjct: 67 AEEHIAQLKERFD--NVNEVRVDLTSTFEDFKSAVPTIDDQAKVDLSLANTRARLRMTTL 124 Query: 392 MALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 L+ + +++ T NK E VG+ T YGD +P+ DL K++V+ LA+ Sbjct: 125 YYLAGINSSLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVYALAA 176 >gi|288556834|ref|YP_003428769.1| NAD synthetase [Bacillus pseudofirmus OF4] gi|288547994|gb|ADC51877.1| NAD synthetase [Bacillus pseudofirmus OF4] Length = 274 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 15/165 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT-----IMLPYKYTSPQ 334 L+DY+ K ++G+SGG DS+L A IAVD L E + + LPY Q Sbjct: 31 LKDYLLKTGTKGYVLGISGGQDSSLAGKLAQIAVDELNDEKGGSYQFIAVRLPY---GIQ 87 Query: 335 SLEDAAACAKALGCKYDVLP---IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 ED A A K V+ I V+ + +Q EE S N ++R R + Sbjct: 88 HDEDDAQLALEF-IKPSVIKTVNIKAAVDASEAAFNQATGEEMSDFHKGNTKARERMKVQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 L+ H +++ T + +E G+ T YGD + PL L K Q Sbjct: 147 FDLAAHYGCLVIGTDHAAEAITGFFTKYGDGACDIAPLFGLNKRQ 191 >gi|170691769|ref|ZP_02882933.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia graminis C4D1M] gi|170143053|gb|EDT11217.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia graminis C4D1M] Length = 292 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 21/232 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+A AQ++ GD+ N+ K +EA R+G+ ++LF EL + G+ + + ++ Sbjct: 14 LKVAAAQIDSSYGDLDTNLGKHLSMIDEARRRGVAMLLFPELSLCGHSAGKDALQLA-MR 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEF 123 AI L + G GF + G NS + G I+ V KI L Y + Sbjct: 73 VDHPAIAALAQASV--GLHTSFGFIEEAPGGQFYNSQASVTEGAIVHVHRKIQLATYGKL 130 Query: 124 HEKRTFISGYSNDPI-VFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY--- 179 + + G + RD R+ IC D+W N + L G L + +S Sbjct: 131 RDGLYYAPGADLGAFGIDRDWRVATPICNDLW-NPALVHDLMCDGVTLLAAPISSAREAV 189 Query: 180 ---YHN----KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + N +L R VT ++ ++ N++G + L F G S D Sbjct: 190 GGGFDNPSAWELNLRFYAVTYGVA-----VVMANRIGTEGMLRFWGGSRILD 236 >gi|255955723|ref|XP_002568614.1| Pc21g16060 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590325|emb|CAP96503.1| Pc21g16060 [Penicillium chrysogenum Wisconsin 54-1255] Length = 717 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 133/593 (22%), Positives = 210/593 (35%), Gaps = 135/593 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSFI 63 + +A LN D GN + + +A G L + EL I+GY D + +F+ Sbjct: 5 VTLATCSLNQWALDFEGNAERIIESIRQAKAAGATLRVGPELEITGYGVLDGFLEGDTFL 64 Query: 64 QACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + H IV VG P + + N VI II +R K+ L N Sbjct: 65 HSWEMLARIID---HPDCQDIVVDVGLPVRHRNVRYNCRVIFYNRKIILIRPKMWLANDG 121 Query: 122 EFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKN 156 + E R F I+G P I RD LG+ CE+++ Sbjct: 122 NYREHRHFTPWQRPQEVEDYYLESIVGKITGQYKVPFGDAVISTRDTCLGLETCEELFTP 181 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 + G E + + + S + KL R ++T +Y NQ G D L Sbjct: 182 NGPHVPYGLAGVEIISNSSGSHHELKKLDTRVNLITQATKLSGGIYLYANQQGCDGDRLY 241 Query: 216 FDG-ASFCFDGQ---QQLAFQMK-------------------------HFSEQNFMTEWH 246 +DG A +G+ Q F + S+Q+ Sbjct: 242 YDGCAMIVINGEIVAQGSQFSLNDVEVVTATVDIEEVRTYRCNASRGLQASKQSPYVRLD 301 Query: 247 YDQQLSQWNYMSDDSAST------MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 D +LS+ + ++ S +T Y +EE A AC L DY+++ + LS Sbjct: 302 LDIRLSRRDEDAEPSLATSMPIKPRYHAPEEEIALGPACWLW--DYLRRCGAAGFFLPLS 359 Query: 301 GGIDSALCAAI-------AVDALGKENVQTI--------------MLP------------ 327 GGIDS A I + A+ + N Q I LP Sbjct: 360 GGIDSCATATIVHSMCREVLKAVREGNEQVIKDVRRLCAKPADSEWLPTTTQEICKSIFH 419 Query: 328 -----YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-----SGI 377 + + ++ + AA A +G + +V +L + +P G Sbjct: 420 TSYMGTQNSGQETRDRAARLAADIGSYHIDFNFDTVVTSIMNLFTVLTNFQPRFKVHGGS 479 Query: 378 VAE-----NIQSRIR-------GNILMALSNHSKA---MLLTTSNKSEISVGYGTLYGDM 422 AE N+Q+R+R ++L + ++L +SN E GY T Y Sbjct: 480 SAENAALQNVQARLRMVLSYLFASLLPTVRQRPGGGGLLVLASSNVDECLRGYLTKYDAS 539 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 S NP+ + K + + SW G + L L E I +P+AEL P Sbjct: 540 SADLNPIGSVSKVDLKKFISWS---GHSFDLPILEEFI-----HATPTAELEP 584 >gi|148973963|ref|ZP_01811496.1| NAD synthetase [Vibrionales bacterium SWAT-3] gi|145965660|gb|EDK30908.1| NAD synthetase [Vibrionales bacterium SWAT-3] Length = 276 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 42/236 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL----GKENVQ--TIMLPYKYTSP 333 ++ +Q++ +I+G+SGG+DS C A +AVD+L G + Q + LPY Sbjct: 28 IKTKLQQSGCKSLILGISGGVDSTTCGRLAQLAVDSLNESTGSNDYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENI 382 Q ED A A ++ K V +H +H + L + + I V N+ Sbjct: 85 QKDEDEAQLALSFIQPSQSVSVNIKAGVDGLH-AASHVALEGTGLLPTDSAKIDFVKGNV 143 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R R ++ + +++ T + +E G+ T +GD + PL L K QV +LA+ Sbjct: 144 KARARMIAQYEIAGYVGGLVIGTDHSAENITGFYTKHGDGACDLAPLFGLNKRQVRELAA 203 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + P +++K P+A EL P + D+ +L Y +DD ++ Sbjct: 204 TLGA--------------PERLVKKVPTADLEELDPQKADEAALNLSYDQIDDFLE 245 >gi|254805157|ref|YP_003083378.1| putative NH(3)-dependent NAD(+) synthetase [Neisseria meningitidis alpha14] gi|254668699|emb|CBA06455.1| putative NH(3)-dependent NAD(+) synthetase [Neisseria meningitidis alpha14] Length = 263 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 18/170 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAA 340 L +Y + N ++G+SGGIDSA+ + +A + T++L P + P LE A Sbjct: 14 LDEYAAQANAKGFVVGVSGGIDSAVVSTLAA----RTGRPTLLLDMPIR-QHPGQLERAR 68 Query: 341 ACAKALGCKYDVLPIH--DLVNHF------FSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 + L +Y + DL + F + +P + N +SR+R L Sbjct: 69 LHIRNLQRQYANVSAQTVDLTDTFQTFEQTVGIHQTAFDNQPLSLA--NARSRLRMLTLY 126 Query: 393 ALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 127 YYGQIHGLLVTGTGNKIEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 176 >gi|229075743|ref|ZP_04208720.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock4-18] gi|228707295|gb|EEL59491.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock4-18] Length = 280 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 13/181 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+K+A Q++ V GD+ N+ A+ EA ++ D+I+ EL+ +GY DL Sbjct: 20 EKMKVACIQMDIVFGDVEKNMENAKNKISEAMKERPDVIVLPELWTTGY---DLTRLSEI 76 Query: 63 IQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINL 117 A ++T LK + G IV G +Q ++GV N++ V+ + G+++ K++L Sbjct: 77 --ADRDGLETKERLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNNEGDLVNEYSKVHL 134 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + E + I+G DI IC DI + H K GA+ F + Sbjct: 135 --FQLMDEHKYLIAGNETGEFKLDDIECAGTICYDIRFPEWMRVHTAK-GAKVFFVVAEW 191 Query: 178 P 178 P Sbjct: 192 P 192 >gi|333028390|ref|ZP_08456454.1| putative hydrolase [Streptomyces sp. Tu6071] gi|332748242|gb|EGJ78683.1| putative hydrolase [Streptomyces sp. Tu6071] Length = 285 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 97/237 (40%), Gaps = 27/237 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE-------- 54 L++A+AQ + GD+ N+ A G L++ ELF+SGY PE Sbjct: 9 PPLRLALAQSSGTPGDVRANLDALDALAARAASSGAHLLVAPELFLSGYAPEHRSPDAGV 68 Query: 55 -------DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 D + + A L + G ++ G+P + NS +++ G Sbjct: 69 AGSRSTPDAPPLAALALEEAEAAAELGALARRHGLAVLAGYPERAGSATYNSALLVGPDG 128 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV---FRDIRLGILICEDIWKNSNICKHL 163 +A K +L Y + E+ F +G + +V R +RLG+LIC D+ N+ H Sbjct: 129 APLAAYRKTHL--YGPY-ERAVFTAG--DRAVVQAELRGVRLGVLICYDVEFPENVRAH- 182 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 G E L A ++ + + V S +H I YVN+ G + F G S Sbjct: 183 ADAGTEVLLVPTALLAPYDFVARSLVPVRAFESQLH--IAYVNRTGPEGGFDFVGLS 237 >gi|88854385|ref|ZP_01129052.1| hypothetical protein A20C1_09214 [marine actinobacterium PHSC20C1] gi|88816193|gb|EAR26048.1| hypothetical protein A20C1_09214 [marine actinobacterium PHSC20C1] Length = 284 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 15/183 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A Q+ VGD+A N R A EA G +++ EL +GY D+ +S + Sbjct: 6 VTVASCQVALAVGDLAANRRSLRSAISEAADAGAQVVVLPELANTGYMFADIGELRSLAE 65 Query: 65 ACSSAIDTLKSDTHDGGAG-----IVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLP 118 +D L AG IV GF + V NS VI+DA ++A K +L Sbjct: 66 ----PVDGLTVSEWVSLAGEHNLIIVGGFAEAGADCEVFNSAVIVDASGVLACYRKAHLW 121 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 N + F G P+V + R+G+++C D+ + + +GAE L Sbjct: 122 NT---EKADLFTPGSGTPPVVDTAVGRIGVMVCYDL-EFPEWVRTAALEGAELLCCPVNW 177 Query: 178 PYY 180 P Y Sbjct: 178 PLY 180 >gi|187608643|ref|NP_001120406.1| NAD synthetase 1 [Xenopus (Silurana) tropicalis] gi|170284960|gb|AAI61121.1| LOC100145482 protein [Xenopus (Silurana) tropicalis] Length = 707 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 133/606 (21%), Positives = 219/606 (36%), Gaps = 138/606 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN+ + R+ A + L EL I GY D ++ Sbjct: 1 MGRKVTVATCALNQWALDFEGNLNRILRSISIAKEKKARYRLGPELEICGYGCSDHFYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I + L VG P + N VI I+ +R K+ + N Sbjct: 61 DTIFHSFQVLAKLLESPETTDIICDVGMPVMHKNVRYNCRVIFLNRKILLIRPKMVMANE 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 + E R F I+G P I +D +G ICE++W Sbjct: 121 GNYRELRWFTPWSRIREVEDFFLPRTIQCITGQITVPFGDAVIATKDTCVGTEICEELWA 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDEL 214 ++ + G E + + +AS + K R +++ + + N G D L Sbjct: 181 PNSPHIDMGLDGVEIITNGSASHHELRKAYLRVDLIKSTTAKNGGIYLLSNMKGCDSDRL 240 Query: 215 IFDGASFC-FDG-----------------------------QQQLAFQMKHFSEQNFMTE 244 FDG + +G + Q++ + S Sbjct: 241 YFDGCAMVSLNGDIVAQGSQFSLTDVEVLTATLDLEDVRSYRAQISSRCISASRVRPFHR 300 Query: 245 WHYDQQLSQWNYM---SDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 H D LS ++ + ++D Y +EE + AC L DY++++ ++ LSG Sbjct: 301 VHVDFSLSSFDDLDLPTNDLIQWKYHTPEEEISLGPACW--LWDYLRRSKQSGFLLPLSG 358 Query: 302 GIDSALCAAI-------AVDALGKEN------VQTIMLPYKY--TSPQSL---------- 336 G+DS+ A I +A+ N VQ I+ Y TSPQ L Sbjct: 359 GVDSSAVACIVYSMCTLVCEAVATGNGDVLTEVQGIVQDDTYLPTSPQDLCKRILTTCYM 418 Query: 337 ----------EDAAACAKALGCKYDVLPIHD----LVNHFFSLMS----QFLQEEPSG-- 376 + A A+ +G Y + P D + + F +++ +F SG Sbjct: 419 ASENSSQDTHDRAKHLAEQIG-SYHLTPKIDGAVKAIMNIFQVVTGKVPKFRAHGGSGRE 477 Query: 377 -IVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + +N+Q+RIR I L A ++L ++N E GY T Y S N Sbjct: 478 NLALQNVQARIRMVIAYLFAQLSLWARGLEGGLLVLGSANVDESLRGYLTKYDCSSADLN 537 Query: 428 PLKDLYKTQV----------FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 P+ + KT + FQL + + GI S PP+ E P + + Q Sbjct: 538 PIGGISKTDLRGFIQYSIDRFQLHALK---GIMSA--------PPTA-ELEPLTDGKVSQ 585 Query: 478 TDQESL 483 TD++ + Sbjct: 586 TDEDDM 591 >gi|86748061|ref|YP_484557.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris HaA2] gi|86571089|gb|ABD05646.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris HaA2] Length = 557 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 9/177 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++ + A Q +GD NIA A R E+A RQG +LI+F E +GY + + Sbjct: 4 RRFRAAAVQTLAKLGDFDFNIALATRYVEDAVRQGAELIVFPECMDTGYLFDSPEHCREL 63 Query: 63 IQACSSA--IDTLKSDTHDGGAGIVVGFPRQD--QEGVLNSVVILDAGNIIAVRDKINLP 118 + + + L + + G I G D +E + N+ ++ D +A Sbjct: 64 AETLADGPFVKALAALSRKHGVYIASGITEWDPAKEKIFNTGIMFDRKGEVACHYH---K 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 + H++ F G P+V D+ R+G+LIC D + I + + QGAE + + Sbjct: 121 QFLATHDQNWFAFGERGCPVVDTDLGRIGLLICFD-GRIPEIFRAMTMQGAEVIVDM 176 >gi|300176517|emb|CBK24182.2| unnamed protein product [Blastocystis hominis] Length = 258 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 35/213 (16%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN--VQTIMLPYK--YTSPQSLEDAAAC 342 +++ ++ +SGGIDSA+ + A+ E+ +Q I+ + ++S + A C Sbjct: 1 MRQCGLKAAVVSVSGGIDSAVTLGLMKHAMEMEDSPIQRILGISQPIHSSTWAYNRAMEC 60 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS-RIRGNILMALSNH---- 397 KALG V+ D + F SL + L + +GI+ + S ++R + + H Sbjct: 61 GKALGVDIIVV---DQTSVFDSL--KTLVDTATGIIGNDFSSGQLRSYMASSSPPHLIPS 115 Query: 398 ------SKAMLLTTSNKSEIS-VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 + +++ T N+ E +GY GD + DL+K++VF + Sbjct: 116 ARPQSGTPCVVMGTGNRDEDGYLGYFCKAGDGVVDVQLIADLHKSEVF---------AVG 166 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 LG +P SILE PSA+L QTD+E L Sbjct: 167 RALG-----VPASILESPPSADLWEGQTDEEEL 194 >gi|253702168|ref|YP_003023357.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M21] gi|251777018|gb|ACT19599.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M21] Length = 259 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 20/227 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K +K A Q N V+ D+ N+A +A QG++L + E++ G+ +L Sbjct: 1 MQKSIKAAAVQFNIVLADVDQNVAYVEKALRRLAAQGVELAVLPEMWSCGFAYREL---N 57 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ L++ + + ++ P + V N+ ++D G + K++L + Sbjct: 58 QLATRTPGIVEKLQALSAELPLTVIGSLPEPHGDKVFNTAYVVDRGRVAGSYRKMHL--F 115 Query: 121 SEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 S E R G + P++ + ++G++IC D+ + + + L GA+ + P Sbjct: 116 SLMGEDRHLDRG--DSPLLAQTSVGKIGVMICYDL-RFPELARRLAVDGADIIVVPGEWP 172 Query: 179 YYHNKLKKRHE----IVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 K R E ++ G+ L +I N G +L F G+S Sbjct: 173 ------KPREEHWRGLLKGRAIENQLFVIAANACGVIGKLDFFGSSM 213 >gi|156976457|ref|YP_001447363.1| NAD synthetase [Vibrio harveyi ATCC BAA-1116] gi|189030738|sp|A7N654|NADE_VIBHB RecName: Full=NH(3)-dependent NAD(+) synthetase gi|156528051|gb|ABU73136.1| hypothetical protein VIBHAR_05230 [Vibrio harveyi ATCC BAA-1116] Length = 276 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 42/236 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ------TIMLPYKYTSP 333 ++ +Q + +++G+SGG+DS C A +AVD L +E+ + LPY Sbjct: 28 IKRKLQDSGCKSLVLGISGGVDSTTCGRLAQLAVDQLNEESDDNGYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENI 382 Q ED A A ++ K V +H +H + L + + + V N+ Sbjct: 85 QKDEDEAQLALDFIQPTHSVSVNIKAGVDGLH-AASHVALEGTGLLPTDAAKVDLVKGNV 143 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R R ++ + ++L T + +E G+ T +GD + PL L K QV ++A+ Sbjct: 144 KARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDMAPLFGLSKRQVREVAA 203 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 204 TLGA--------------PELLVKKVPTADLEELAPQKADEDALSLTYEQIDDFLE 245 >gi|303318116|ref|XP_003069060.1| Glutamine-dependent NAD(+) synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108741|gb|EER26915.1| Glutamine-dependent NAD(+) synthetase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320036767|gb|EFW18705.1| hypothetical protein CPSG_04251 [Coccidioides posadasii str. Silveira] Length = 712 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 128/600 (21%), Positives = 202/600 (33%), Gaps = 144/600 (24%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A LN D GN A+ + + A + G L + EL ISGY D + Sbjct: 7 VATCTLNQWALDWEGNTARIIESIKRAKQAGAKLRVGPELEISGYDCLDHFLENDVYLHS 66 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + + +D G + +G P + N VI G I+ +R KI L N + E Sbjct: 67 WEMMARILADEECHGILLDIGMPIMHRNLRFNCRVIAIDGKILLIRPKIWLANDGNYREM 126 Query: 127 RTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSNICK 161 R F + G + P I D LG CE+++ + Sbjct: 127 RYFTPWERPRHVEDYYLPRIIQRLQGSTKVPFGDAVISTPDTCLGAETCEELFTPAGPHA 186 Query: 162 HLKKQGAEFLFSLNASPYYHN--KLKKRHEIVTGQISHVHLPIIYVN-QVGGQDELIFDG 218 + G E N+S +HN KL +R ++ +Y N Q GG + L +DG Sbjct: 187 DMGLNGVEIF--TNSSGSHHNLRKLDQRVSLILEATRKSGGIYLYSNLQGGGGERLYYDG 244 Query: 219 ASFCFDGQQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-------- 268 S + +A Q FS + +T +++ + + + P Sbjct: 245 CSMIVVNGEIVA-QGTQFSLNDVEVVTATVDLEEVRAFRFAPSRGLQAVRAPEYRRIETS 303 Query: 269 -------------------------LQEEEADYN-ACVLSLRDYVQKNNFHKVIIGLSGG 302 L EEE AC L DY++++ ++ LSGG Sbjct: 304 FSLSAESDQLDPGLSPSPRLDVRYHLPEEEIALGPACWLW--DYLRRSQLAGFLVPLSGG 361 Query: 303 IDSALCAAI-------AVDALGKENVQTI--------------MLP-------------- 327 IDS A I ++A+ + N Q + LP Sbjct: 362 IDSCATAIIVFSMCRLVIEAIERGNQQVVTDVKRIAGVYEKEGWLPKTPQELCYNIFHTV 421 Query: 328 YKYTSPQSLED----AAACAKALGCKYDVLPIHDLVNH----------FFSLMSQFLQEE 373 Y + QS ++ A +KA+G + L I D+ N F + + Sbjct: 422 YMGMASQSSKETRSRAKDLSKAIGAYHVDLNIDDIFNAQKDTFAKATGFNPKFKVYGGTQ 481 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLT--------------TSNKSEISVGYGTLY 419 + +NIQ+R R M + +L T ++N E GY T Y Sbjct: 482 AENLALQNIQARTR----MVTAYEFSQLLPTVRKRPGGGGLLVLGSANCDEALRGYYTRY 537 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 S NP+ + K + +W I L +P+AEL P D Sbjct: 538 DCSSADINPIGSISKKDLKLFIAWAQKE--------FELPILVDFLNATPTAELEPITKD 589 >gi|189347208|ref|YP_001943737.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium limicola DSM 245] gi|189341355|gb|ACD90758.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium limicola DSM 245] Length = 291 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 22/255 (8%) Query: 7 IAIAQLNPVVGDI-AGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFI 63 ++IA + G+ A N+ KA + EA +G ++ ELF + Y ED + F Sbjct: 6 VSIALVQTSCGEKPADNLEKACQKIREAVAKGAKIVCLQELFTTLYFCQTEDY---EPFG 62 Query: 64 QACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLP 118 A + + D L+ + IV + G+ N+ ++DA G + K+++P Sbjct: 63 HAEAIPGPSTDCLQELARELDVVIVASLFEKRARGLYHNTAAVIDADGRYLGKYRKMHIP 122 Query: 119 NYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + F+EK F G + R R+G+LIC D W + + +GAE LF A Sbjct: 123 DDPGFYEKFYFTPGDLGYRVFDTRYARIGVLICWDQW-YPEAARLVALRGAEILFYPTAI 181 Query: 178 PYYHNKLKKRHEIV------TGQISHVHLPIIYV---NQVGGQDELIFDGASFCFDGQQQ 228 + ++ + I T Q SH ++V N+VG + EL F G SF D Q Sbjct: 182 GWAASECSEEVRIAQQQAWKTMQQSHAIANGVFVAAANRVGIEGELEFWGNSFVSDPFGQ 241 Query: 229 LAFQMKHFSEQNFMT 243 + + H E M Sbjct: 242 VIAEAAHQDEAVLMA 256 >gi|209768638|gb|ACI82631.1| NAD synthetase [Escherichia coli] gi|320646947|gb|EFX15780.1| NAD synthetase [Escherichia coli O157:H- str. 493-89] gi|320652229|gb|EFX20527.1| NAD synthetase [Escherichia coli O157:H- str. H 2687] gi|320657830|gb|EFX25592.1| NAD synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658405|gb|EFX26099.1| NAD synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|320668302|gb|EFX35129.1| NAD synthetase [Escherichia coli O157:H7 str. LSU-61] Length = 275 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + + R +E+ +E+KRR Sbjct: 240 G-KNVPQQVARTIENWYLKTEHKRR 263 >gi|306830695|ref|ZP_07463860.1| NAD+ synthetase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304427203|gb|EFM30310.1| NAD+ synthetase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 274 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 36/229 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDAL----GKENVQTIMLPYKYTSPQ 334 L+DY++K++F K ++G+SGG DS+L A IAV+ L G ++ + I + Y Sbjct: 30 LKDYLKKHSFLKSYVLGISGGQDSSLAGRLAQIAVEELRAETGDDSYKFIAVRLPYGVQA 89 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGN 389 EDA K + + VN + Q + E +GI NI++R R Sbjct: 90 DEEDAQRALKFIQPDVSLA-----VNIKEGVDGQVRELEKAGIDVSDFNKGNIKARQRMI 144 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ + ++ T + +E G+ T +GD PL L K Q QL Sbjct: 145 TQYAVAGANSGAVIGTDHAAENITGFFTKFGDGGADIIPLYRLNKRQGKQL--------- 195 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P+I EK P+A+L RP D+ +L Y +DD ++ Sbjct: 196 LAELGA-----DPAIYEKIPTADLEENRPGIADEVALGVTYNDIDDYLE 239 >gi|119469672|ref|ZP_01612541.1| NAD synthetase [Alteromonadales bacterium TW-7] gi|119446919|gb|EAW28190.1| NAD synthetase [Alteromonadales bacterium TW-7] Length = 276 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 40/223 (17%) Query: 295 VIIGLSGGIDSALCA---AIAVDALGKENVQ------TIMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS+ C +AV+ L +E+ + LPY Q+ ED A A Sbjct: 40 LVLGISGGVDSSTCGRLCQLAVNELNEEHSTNKYQFIAVRLPYGV---QADEDEAQMAVD 96 Query: 344 ---KALGCKYDVLP----IHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALS 395 + ++ P +H+ V + L E+ + N+++R R ++ Sbjct: 97 FIQPSKRMTVNIQPAADALHEQVLIAMTSSGDALPEQAQIDFIKGNVKARQRMVSQYEIA 156 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 S+ +++ T + +E G+ T +GD + PL L K QV LA + LG Sbjct: 157 GFSQGLVVGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVRALA---------TALGA 207 Query: 456 LTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P ++EK+P+A+L RP TD+E+L Y +DD ++ Sbjct: 208 -----PAVLVEKAPTADLESDRPGLTDEEALGLSYNQIDDFLE 245 >gi|303326535|ref|ZP_07356978.1| hydrolase, carbon-nitrogen family [Desulfovibrio sp. 3_1_syn3] gi|302864451|gb|EFL87382.1| hydrolase, carbon-nitrogen family [Desulfovibrio sp. 3_1_syn3] Length = 283 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 22/192 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---------- 51 ++K K+A+ Q ++ N A R EA +G D +LF E F+S Y Sbjct: 1 MRKFKVAMVQYKVPTSNVGENTELAIRYITEAKAEGADFVLFPECFLSAYQFPKICEPLQ 60 Query: 52 PPEDLVFKKSFIQACSSAID-------TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD 104 P E++ F + C A+D ++ + G+ + + ++ N+ I+D Sbjct: 61 PVEEIETNDEFAKWCEDALDDDCTYLEKIRRVAKELSIGVEITCLTKGKKYPQNTAFIID 120 Query: 105 A-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 G+II K++ +F +R SG F I +G++IC D + + L Sbjct: 121 RDGSIILKYSKVHT---CDFDLERYLESGKEFKVCHFDGICIGVMICYD-REYPESAREL 176 Query: 164 KKQGAEFLFSLN 175 QGAE + N Sbjct: 177 MMQGAELILVPN 188 >gi|225849845|ref|YP_002730079.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Persephonella marina EX-H1] gi|225645105|gb|ACO03291.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Persephonella marina EX-H1] Length = 246 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 15/224 (6%) Query: 11 QLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAI 70 Q+N +G+ NI K ++ + L+L E+F G+ E+L ++ S Sbjct: 7 QVNLELGNTEKNIEKVFSYIKKVKKG--SLVLLPEMFSCGFDNENLDIH---VKETPSIY 61 Query: 71 DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFI 130 LK +H+ I P + + G+ N ++D G I+ + K+ L + E + + Sbjct: 62 KQLKKISHEKHLVISGTLPEKSRSGIYNKAFVIDNGEIVYKQAKVKL--FRPTGEHKYYR 119 Query: 131 SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEI 190 +G + D + LGI+IC ++ + NI L+K+G E + P K +K+H Sbjct: 120 AGKNFDVTESSNGNLGIMICFEL-RFPNISYTLRKKGVEIIL----VPAQWGKPRKKHLE 174 Query: 191 VTGQISHV--HLPIIYVNQVGGQDELIFDGASFCFD-GQQQLAF 231 + Q + +I N G ++ + G+S +D + LAF Sbjct: 175 ILSQARAIEDQAFVIVSNTTGRIGDIDYAGSSGIYDPWGEPLAF 218 >gi|332305547|ref|YP_004433398.1| NAD+ synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172876|gb|AEE22130.1| NAD+ synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 276 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 39/249 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---- 323 P + E++ V ++ + + +++G+SGGIDS +A A+ + N Q+ Sbjct: 14 PQIDVESEVETRVNFIKSQLLASGLKTLVLGISGGIDSCTLGRMAQIAVNQLNSQSTSDY 73 Query: 324 ----IMLPYKYTSPQSLEDAA---------ACAKALGCKYDVLPIHDLVNHFFSLMSQFL 370 + LPYK Q+ ED A + + ++ + V I D S Sbjct: 74 QFVAVRLPYKV---QADEDDAQLSINFIQPSQSISVNVQPGVDAIDDQTTSALSAAGLLP 130 Query: 371 QEE-PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 + V N+++R R + ++ ++L T + +E G+ T YGD + PL Sbjct: 131 NSDNKRDFVKGNVKARTRMIVQYEIAGMLDGLVLGTDHSAENITGFYTKYGDGACDLAPL 190 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-P 485 L K QV Q+AS+ + P +++ K P+A+L P + D+++L Sbjct: 191 FGLNKRQVRQVASYLGA--------------PENVVNKPPTADLESLSPQKADEQALGMS 236 Query: 486 YPILDDIIK 494 Y +DD ++ Sbjct: 237 YDDIDDFLE 245 >gi|258422990|ref|ZP_05685889.1| NAD+ synthetase [Staphylococcus aureus A9635] gi|257846777|gb|EEV70792.1| NAD+ synthetase [Staphylococcus aureus A9635] Length = 273 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 42/244 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TIMLPYKYTSPQ 334 ++ YVQ ++F K +++G+SGG DS L + AV+ L +E + LPY Sbjct: 31 IKSYVQSHSFIKSLVLGISGGQDSTLVGKLVQMAVNELREEGNDCTFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA +AL + P + + + Q +Q + +GIV + Q +R R Sbjct: 88 --KDADEVEQALLF---IEPDEIVTVNIKPAVDQSVQSLKEAGIVLTDFQKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ + +++ T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 143 KVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAY----- 197 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEES 502 LG P + EK+P+A+L +P D+++L Y +D+ + K + E+ Sbjct: 198 ----LGA-----PKQLYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQK 248 Query: 503 FINN 506 I N Sbjct: 249 VIEN 252 >gi|253700368|ref|YP_003021557.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M21] gi|251775218|gb|ACT17799.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. M21] Length = 293 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 19/239 (7%) Query: 2 LKKLKIAIAQ--LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLV 57 + LK+A+ Q L P D IA + EA +G L+L EL GY ED Sbjct: 1 MHNLKVALVQQALRP---DREKMIAATSASIREAAAKGAKLVLLQELHTGGYFCQTEDTA 57 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKI 115 + D + + IV + G+ + +VVI G+I K+ Sbjct: 58 RFDLAESIPGPSTDHFGALARELSVVIVTSLFEKRAPGLYHNTAVVIEKDGSIAGKYRKM 117 Query: 116 NLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 ++P+ F+EK F G +P+ +LG+L+C D W + + GA+ L Sbjct: 118 HIPDDPAFYEKFYFTPGDLGFEPVQTSVGKLGVLVCWDQW-YPEAARLMALAGADLLIYP 176 Query: 173 -SLNASPYYHNKLKKRH--EIVTGQISHV---HLPIIYVNQVGGQDELIFDGASFCFDG 225 ++ P ++R VT Q SH +P++ VN+VG +D+ GA F G Sbjct: 177 TAIGWDPRDEEAEQQRQLDAWVTIQRSHAVANGIPVVSVNRVGFEDDPSGAGAGIKFWG 235 >gi|284037447|ref|YP_003387377.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Spirosoma linguale DSM 74] gi|283816740|gb|ADB38578.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Spirosoma linguale DSM 74] Length = 291 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 116/287 (40%), Gaps = 41/287 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M K + I + Q++ D+ NI KA EA +G ++ ELF S Y + Sbjct: 1 MSKNVNIGLVQMS-CSADVETNIQKAISGIREAAAKGAQIVCLQELFTSLYFCDVEDHHN 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRD 113 ++ ++ + L + G IV + G+ N+ +LDA G+ + Sbjct: 60 FSLAEAIPGPTTNRLGELAGEL---GVVIVASLFEKRAHGLYHNTTAVLDADGSYLGKYR 116 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 K+++P+ ++EK F G + + R+G+LIC D W + GAE LF Sbjct: 117 KMHIPDDPGYYEKFYFTPGDLGYKVFDTKFARIGVLICWDQWY-PEAARITALMGAEILF 175 Query: 173 SLNASPYYHNK---------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 A + N+ +++ H I G VH ++ VN+VG + + F Sbjct: 176 YPTAIGWDTNEPDPAQNTEQYNAWQTIQRSHAIANG----VH--VVAVNRVGREADQQFW 229 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 G SF + L + H +Q + D LS+ W Y D Sbjct: 230 GGSFVANPFGSLLYLAPH--DQELVHVQTVDLALSEKYRTTWPYFRD 274 >gi|229086603|ref|ZP_04218772.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock3-44] gi|228696685|gb|EEL49501.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock3-44] Length = 280 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 13/225 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKS 61 K+KIA Q++ GD+ N+ A++ EEA + D+I+ EL+ +GY E L + K Sbjct: 21 KMKIACIQMDIAFGDVKINMENAQKKIEEAMQGKPDVIVLPELWTTGYDLERLPEIADKD 80 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPN 119 IQ L IV G +Q + GV N++ I++ G + K++L Sbjct: 81 GIQTKQ----LLSEWAQQYSVNIVGGSIAKQTKHGVTNTMYIVNREGKLQNEYSKVHL-- 134 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + +E I+G +++ G +IC DI + H + GA+ LF + P Sbjct: 135 FQLMNEHNYLIAGDETGEFTLDEVQCGGVICYDIRFPEWLRVHTGR-GAKVLFVVAEWPL 193 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 194 V--RLAHWRLLLQARAIENQCYVVACNRAGKDPNNVFAGHSLIVD 236 >gi|218899195|ref|YP_002447606.1| hydrolase, carbon-nitrogen family [Bacillus cereus G9842] gi|218542242|gb|ACK94636.1| hydrolase, carbon-nitrogen family [Bacillus cereus G9842] Length = 259 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 15/225 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY DL Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGY---DLARLSEI-- 55 Query: 65 ACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 A ++T LK + G IV G +Q ++GV N++ +++ G ++ K++L Sbjct: 56 ADRDGLETKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNKEGELVNEYSKVHL-- 113 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + E + I+G S D+ IC DI + H K G++ LF + P Sbjct: 114 FQLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GSKVLFVVAEWPL 172 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 173 V--RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|159109463|ref|XP_001704996.1| NH3-dependent NAD+ synthetase [Giardia lamblia ATCC 50803] gi|157433073|gb|EDO77322.1| NH3-dependent NAD+ synthetase [Giardia lamblia ATCC 50803] Length = 287 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 40/221 (18%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN---VQTIMLPYKYTSPQSL 336 V +L +Y +K I+ LSGGIDSA+ A+ + E + + L S S+ Sbjct: 32 VDALNEYARKTGIAGCIVNLSGGIDSAVTFALLARSKAAEKSPITRVLGLAQPILSTASI 91 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 ++ A + G +++ + D + F SL S L E+ GI + RGN+ + Sbjct: 92 QNRAYELSSYG---EIVTV-DQTDIFMSLTS--LVEDACGIRGKEFA---RGNLKSYMRT 142 Query: 397 HSK---AMLLTTSNKSEISVGYGT------LY-----GDMSGGFNPLKDLYKTQVFQLAS 442 + A LL+ + VG G LY GD + DL+K++VF + Sbjct: 143 PAAFYVAQLLSQEGTPSVVVGTGNYDEDGFLYYFSKAGDGVSDIQLIHDLHKSEVFAVGR 202 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + LG +P SIL+ PSA+L QTD+E + Sbjct: 203 Y---------LG-----LPESILDAPPSADLWEGQTDEEEI 229 >gi|86140637|ref|ZP_01059196.1| NH(3)-dependent NAD synthetase [Leeuwenhoekiella blandensis MED217] gi|85832579|gb|EAQ51028.1| NH(3)-dependent NAD synthetase [Leeuwenhoekiella blandensis MED217] Length = 264 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 15/169 (8%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L+ Y N ++G+SGGIDSA LCA + L E I P + + ++ E Sbjct: 14 LKTYATNANIQGFVVGISGGIDSATTSSLCAKTGLRVLCVE--MPIHQPESHVT-RAQEH 70 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG-----IVAENIQSRIRGNILMA 393 A K DV DL F + + E + N ++R+R + L Sbjct: 71 IAQLKKRFANVSDVRV--DLTQTFETFKTALPAAETETNPGLELSLANTRARLRMSTLYY 128 Query: 394 LSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 + ++ T NK E VG+ T YGD +P+ DL K++V+ LA Sbjct: 129 FAGLHGYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVYALA 177 >gi|289705727|ref|ZP_06502111.1| NAD+ synthetase [Micrococcus luteus SK58] gi|289557567|gb|EFD50874.1| NAD+ synthetase [Micrococcus luteus SK58] Length = 302 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 61/269 (22%), Positives = 103/269 (38%), Gaps = 57/269 (21%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ---- 322 +P + A+ V L DY+ ++G+SGG+DS++ +A A+ + Q Sbjct: 15 LPEIDPAAEVERRVAFLVDYLAATGASGFVLGISGGVDSSVGGRLAQLAVERRRAQLGVT 74 Query: 323 --------------------------------TIMLPYKYTSPQSLEDAAACAKALGCKY 350 + LPYK ++ DA A +G Sbjct: 75 DAVALGGPGTTPPGEAGVGADVVPSRESPRFTAVRLPYKVQHDEA--DARAAMDFVGADQ 132 Query: 351 DV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 DV L I + V + ++ + E S N+++RIR A++ +++ T + + Sbjct: 133 DVTLNIAEPVQGLAAAFAEAVGEPISDYNQGNVKARIRMTAQYAVAGAHGQLVIGTDHAA 192 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E G+ T +GD PL L K QV L + P + K P Sbjct: 193 EAVTGFYTKFGDGGADVLPLAGLNKRQVRALGRELGA--------------PEPLWNKVP 238 Query: 470 SAEL---RPHQTDQESLP-PYPILDDIIK 494 +A+L P QTD+ L Y +DD ++ Sbjct: 239 TADLLDGTPGQTDEAELGMTYEDIDDYLE 267 >gi|15802151|ref|NP_288173.1| NAD synthetase [Escherichia coli O157:H7 EDL933] gi|15831700|ref|NP_310473.1| NAD synthetase [Escherichia coli O157:H7 str. Sakai] gi|168749442|ref|ZP_02774464.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4113] gi|168756744|ref|ZP_02781751.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4401] gi|168762194|ref|ZP_02787201.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4501] gi|168770504|ref|ZP_02795511.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4486] gi|168774957|ref|ZP_02799964.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4196] gi|168782158|ref|ZP_02807165.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4076] gi|168788139|ref|ZP_02813146.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC869] gi|168800077|ref|ZP_02825084.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC508] gi|195937424|ref|ZP_03082806.1| NAD synthetase [Escherichia coli O157:H7 str. EC4024] gi|208810295|ref|ZP_03252171.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4206] gi|208816632|ref|ZP_03257752.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4045] gi|208820140|ref|ZP_03260460.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4042] gi|209396744|ref|YP_002270809.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4115] gi|217328977|ref|ZP_03445058.1| NAD+ synthetase [Escherichia coli O157:H7 str. TW14588] gi|254793358|ref|YP_003078195.1| NAD synthetase [Escherichia coli O157:H7 str. TW14359] gi|261227768|ref|ZP_05942049.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O157:H7 str. FRIK2000] gi|261258067|ref|ZP_05950600.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O157:H7 str. FRIK966] gi|25090768|sp|Q8XDZ9|NADE_ECO57 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238064809|sp|B5YQ27|NADE_ECO5E RecName: Full=NH(3)-dependent NAD(+) synthetase gi|12515759|gb|AAG56726.1|AE005397_3 NAD synthetase, prefers NH3 over glutamine [Escherichia coli O157:H7 str. EDL933] gi|13361913|dbj|BAB35869.1| NAD synthetase [Escherichia coli O157:H7 str. Sakai] gi|187769486|gb|EDU33330.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4196] gi|188016246|gb|EDU54368.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4113] gi|189000295|gb|EDU69281.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4076] gi|189356171|gb|EDU74590.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4401] gi|189360607|gb|EDU79026.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4486] gi|189367472|gb|EDU85888.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4501] gi|189372069|gb|EDU90485.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC869] gi|189377569|gb|EDU95985.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC508] gi|208724811|gb|EDZ74518.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4206] gi|208730975|gb|EDZ79664.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4045] gi|208740263|gb|EDZ87945.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4042] gi|209158144|gb|ACI35577.1| NAD+ synthetase [Escherichia coli O157:H7 str. EC4115] gi|209768642|gb|ACI82633.1| NAD synthetase [Escherichia coli] gi|209768646|gb|ACI82635.1| NAD synthetase [Escherichia coli] gi|217318324|gb|EEC26751.1| NAD+ synthetase [Escherichia coli O157:H7 str. TW14588] gi|254592758|gb|ACT72119.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli O157:H7 str. TW14359] gi|320188427|gb|EFW63089.1| NAD synthetase [Escherichia coli O157:H7 str. EC1212] gi|320641588|gb|EFX10976.1| NAD synthetase [Escherichia coli O157:H7 str. G5101] gi|326342107|gb|EGD65888.1| NAD synthetase [Escherichia coli O157:H7 str. 1044] gi|326343659|gb|EGD67421.1| NAD synthetase [Escherichia coli O157:H7 str. 1125] Length = 275 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREACIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + + R +E+ +E+KRR Sbjct: 241 KNVPQQVARTIENWYLKTEHKRR 263 >gi|314934076|ref|ZP_07841439.1| NAD+ synthetase [Staphylococcus caprae C87] gi|313653187|gb|EFS16946.1| NAD+ synthetase [Staphylococcus caprae C87] Length = 273 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 40/240 (16%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ----TI 324 E +++ ++ YVQ ++F K +++G+SGG DS L I AV+ L E + + Sbjct: 21 EKEFDEIKHFIKSYVQSHSFIKSLVLGISGGQDSTLTGKIVQLAVNELRAEGRECKFIAV 80 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ 383 LPY +DA AL + P + + + Q +Q + +GI + Q Sbjct: 81 KLPYGVQ-----KDADEVEDALQF---IEPDEIVTVNIKPAVDQSVQSLKEAGIELTDFQ 132 Query: 384 -----SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 +R R + +++++ +++ T + +E G+ T YGD + P+ L K Q Sbjct: 133 RGNEKARERMKVQFSIASNQSGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLDKRQGK 192 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 QL + N+ P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 193 QLLKYLNA--------------PKHLYEKVPTADLEDDKPQLPDEEALGVTYDQIDDYLE 238 >gi|155371116|ref|YP_001426650.1| hypothetical protein ATCV1_Z169R [Acanthocystis turfacea Chlorella virus 1] gi|155124436|gb|ABT16303.1| hypothetical protein ATCV1_Z169R [Acanthocystis turfacea Chlorella virus 1] Length = 298 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 19/235 (8%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLV---FKKSFIQACSSAIDTLKSDTH 78 N+ A A G ++I+ ELF Y ++ F + S + + Sbjct: 19 NLRTAENMARNAAANGAEVIVLPELFSMQYFCQEQSGKWFDLAETYEESKVVTRFANLAG 78 Query: 79 DGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDP 137 + G IVV F +D NSVV+ D G I V K ++P ++EK F S++ Sbjct: 79 ELGVVIVVSFFEKDNNEYYNSVVVADVDGAIAGVYRKTHIPQGPCYNEKFYFRP--SDNK 136 Query: 138 IVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRH--E 189 D ++GI IC D W + + L GA+ + ++ + P + N H Sbjct: 137 FGIADTKFGKIGIAICWDQWF-PEVSRILALLGADLIVMPTAIGSEPDFPNGESYHHWAR 195 Query: 190 IVTGQISHVHLPIIYVNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 + G + +PI N++G G+ ++ F G SF D + +A Q+ S++N Sbjct: 196 TIQGHSAANGVPIAVANRIGRERFGRTKIDFYGGSFITDNKGGIAVQVGGTSQEN 250 >gi|170721899|ref|YP_001749587.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida W619] gi|169759902|gb|ACA73218.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida W619] Length = 247 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 15/228 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ QL V G++ N+ + R E+A G +L++F EL ++GY P + ++ + Sbjct: 1 MKLCAVQLASVKGELQVNLDRHLRCIEQAADLGAELVVFPELSLTGYEPT--LARQVALP 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S+ +D L+ + VG P +G+ ++ IL G K L H Sbjct: 59 LTSARLDPLQQICDRLEICVAVGLPLPTADGIQIAMPILRPGQPRLAYAKQRL------H 112 Query: 125 EKRTFISGYSNDPIVFRDIRLGI--LICEDIWKNSNICKHLKKQGAE-FLFSLNASPYYH 181 E + P+VF +L I IC + ++ + + GAE +L S+ + Sbjct: 113 EDELAFFSAGDQPLVFAAGQLQIAPAICYESMFTAHAAQA-RDSGAELYLVSVAKT---A 168 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 +++ +E + +P++ N VG D + G S +D Q L Sbjct: 169 KGIREGNEHYPQVARTLGIPVLMANCVGPADNFVGAGGSAAWDSQGNL 216 >gi|23009104|ref|ZP_00050277.1| COG0388: Predicted amidohydrolase [Magnetospirillum magnetotacticum MS-1] Length = 314 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/287 (22%), Positives = 102/287 (35%), Gaps = 70/287 (24%) Query: 84 IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG----------- 132 +VVG P + + + N+ + + G ++ V K LPNY EF+EKR F SG Sbjct: 11 LVVGAPVRWRSRLYNAALAIQGGRLLGVVPKSYLPNYREFYEKRHFASGAGLLGETIRLG 70 Query: 133 -----YSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 + D I + RL I +CED+W GA + + + SP + Sbjct: 71 GAEAPFGTDLIFAAEDLPRFRLAIEVCEDLWVPQTPGMEAVLAGATVIANPSGSPITVGR 130 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQD---ELIFDG---------------------- 218 R E++T S L G + +L +DG Sbjct: 131 ADSR-ELLTRAASMRGLCAYVYAAAGAGESTTDLSWDGQTSIDENGVRLAEGERFPAGPV 189 Query: 219 ---ASFCFDGQQQLAFQMKHF---SEQNFMTEWH--------------YDQQLSQWNYMS 258 A D Q Q F + QN + W +++ ++ ++ Sbjct: 190 VTLADLDLDLIAQERLQAGSFDDNARQNGLRPWRTVSFRLDPPQGDLGLKRRVERFPFVP 249 Query: 259 DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 D A Q+ YN V L + + +IG+SGG+DS Sbjct: 250 SDPARLA----QDCYEAYNIQVAGLAQRLAATGTKRAVIGVSGGLDS 292 >gi|317506840|ref|ZP_07964612.1| NAD synthase [Segniliparus rugosus ATCC BAA-974] gi|316254768|gb|EFV14066.1| NAD synthase [Segniliparus rugosus ATCC BAA-974] Length = 275 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 35/239 (14%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT------- 323 +EE D L+ DY+ + ++G+SGG DSAL +A L E ++ Sbjct: 21 QEEIDRRVGFLA--DYLVASGAKGFVLGISGGQDSALAGKLA--QLAAEKARSDGHEAQF 76 Query: 324 --IMLPYKYTSPQSLEDAAACAKALGCKYDVLP-IHDLVNHFFSLMSQFLQE-EPSGIVA 379 + LPY + ++ DA + +G V+ + + S + L+ E V Sbjct: 77 LAVRLPYGAQADEA--DAQISLQFIGPDRSVVANVKPGADATASAAATALEGGELRDFVR 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R + AL+ +++ T + +E G+ T YGD PL L K Q Q Sbjct: 135 GNIKARERMVLQYALAGQLGYLVVGTDHAAEAVTGFFTKYGDGGVDVTPLSGLTKRQGAQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L + + P SI +K P+A+L RP D+E+L Y LDD ++ Sbjct: 195 LLRFLGA--------------PESITKKVPTADLEDDRPALPDEEALGLTYTQLDDYLE 239 >gi|119498883|ref|XP_001266199.1| glutamine-dependent NAD(+) synthetase [Neosartorya fischeri NRRL 181] gi|119414363|gb|EAW24302.1| glutamine-dependent NAD(+) synthetase [Neosartorya fischeri NRRL 181] Length = 717 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 130/597 (21%), Positives = 204/597 (34%), Gaps = 143/597 (23%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSFI 63 + +A LN D GN + + +A G L + EL I+GY D + +F+ Sbjct: 5 VTLATCSLNQWALDFEGNAERIIESIRQAKAAGATLRVGPELEITGYGVLDGFLEGDTFL 64 Query: 64 QACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + H IV VG P + + N VI II +R K+ L N Sbjct: 65 HSWEMLARIID---HPDCQDIVVDVGMPVRHRNVRYNCRVIFYNRKIILIRPKMWLANDG 121 Query: 122 EFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKN 156 + E R F I+G P I RD LG+ CE+++ Sbjct: 122 NYRELRHFAPWQRPREIEDYYLEQIVGKITGQYKVPFGDAVISTRDTCLGLETCEELFTP 181 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 + G E + + + S + KL R ++T +Y NQ G D L Sbjct: 182 NGPHIPYGLAGVEIISNSSGSHHELKKLDTRVNLITQATKLSGGIYLYANQQGCDGDRLY 241 Query: 216 FDGASFCFDGQQQLAFQMKHFS------------------------------EQNFMTEW 245 +DG + +A Q FS Q Sbjct: 242 YDGCAMIVINGNIVA-QGSQFSLNDVEVVTATVDIEEVRTYRASSSRNMQATRQPPFVRL 300 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA--------CVLSLRDYVQKNNFHKVII 297 D +LS+ DD A +P + A Y+A L DY++++ + Sbjct: 301 DLDVRLSR----LDDDAEPGLVPSEPISAKYHAPEEEISLGPACWLWDYLRRSGAAGFFL 356 Query: 298 GLSGGIDSALCAAI-------AVDALGKENVQTI--------------MLP--------- 327 LSGGIDS A I V A+ + N Q I LP Sbjct: 357 PLSGGIDSCATAIIVHSMCREVVKAVSEGNQQVIKDVRRLCAEPEGSAWLPSTSQEVCNR 416 Query: 328 --------YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----- 374 + +S ++ E A + +G + +V +L + +P Sbjct: 417 IFHTSFMGTQNSSKETRERAKGLSTEIGSYHIDFNFDTVVTAITNLFTVVTNFQPRFKVH 476 Query: 375 SGIVAE-----NIQSRIR-------GNILMALSNHSKA---MLLTTSNKSEISVGYGTLY 419 G AE N+Q+R+R ++L + ++L +SN E GY T Y Sbjct: 477 GGTGAENAALQNVQARLRMVLSYLFASLLPTVRQRPGGGGLLVLASSNVDECLRGYLTKY 536 Query: 420 GDMSGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 S NP+ + K + + +W R+S + I L +P+AEL P Sbjct: 537 DASSADLNPIGSISKVDLKKFIAWARDSFDLP---------ILHEFLTATPTAELEP 584 >gi|297563520|ref|YP_003682494.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847968|gb|ADH69988.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 276 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 32/216 (14%) Query: 295 VIIGLSGGIDS----ALCAAIAVDALGKEN---VQTIMLPYKYTSPQSLEDAAA----CA 343 +++G+SGG+DS LC +AVD +EN + + + Y + EDAA A Sbjct: 48 LVLGISGGVDSLTAGRLC-RLAVD-RARENGHECEYVAMRLPYGEQKDEEDAARSVEFTA 105 Query: 344 KALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 DV P D + + + + E + V N+++R R A++ + ++ Sbjct: 106 PERCLTVDVGPASDAMADSLAAAGMTYASESSADFVLGNVKARQRMIAQYAVAGGLRGLV 165 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 + T + +E G+ T YGD PL L K +V +A+ + P Sbjct: 166 VGTDHAAEAVTGFFTKYGDGGADLVPLTGLTKRRVRAVAAELGA--------------PE 211 Query: 463 SILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 ++ K P+A+L P + D+E+L Y +DD ++ Sbjct: 212 DLVRKVPTADLETLSPQKPDEEALGLTYDQIDDFLE 247 >gi|169631425|ref|YP_001705074.1| putative hydrolase [Mycobacterium abscessus ATCC 19977] gi|169243392|emb|CAM64420.1| Putative hydrolase [Mycobacterium abscessus] Length = 273 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 9/152 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +LK+A Q + GDIA N+ + A A +G L++ ELF++GY D++++ Sbjct: 7 RLKVAGLQTSGTPGDIAANLDELASAACAAAGEGAQLLITPELFVTGYDIGDVIYE---- 62 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE 122 A + LK + G +VVG P E + NS V +D G + A K +L + Sbjct: 63 LAAQDLLSPLKRIAEEHGIALVVGIPEAVGEKLYNSAVFVDQQGQVRATHRKTHL--FGP 120 Query: 123 FHEKRTFISGYSNDPIV-FRDIRLGILICEDI 153 +++ F +G +V + +++G++IC D+ Sbjct: 121 L-DRQYFTAGSDAVTVVDYLGLKVGMMICYDV 151 >gi|119115350|ref|XP_311035.3| AGAP000112-PA [Anopheles gambiae str. PEST] gi|116130793|gb|EAA06345.4| AGAP000112-PA [Anopheles gambiae str. PEST] Length = 794 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 29/214 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +++A+A LN D GN+ + + A G EL +SGY ED + Sbjct: 1 MGHTVQVAVATLNQWAMDFEGNVERILLSIRLAAANGATYRTGPELEVSGYSCEDHFHEP 60 Query: 61 -SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +++ + ++ ++S G I VG P Q + N V +G ++ +R K+ + + Sbjct: 61 DTYLHCWEALVEIIQSPCCPPGMLIDVGMPVQHRNVAYNCRVAFHSGRVVLIRPKMTMCD 120 Query: 120 YSEFHEKRTFIS--------------------GYSNDP-----IVFRDIRLGILICEDIW 154 + E R F G P I D LG ICE++W Sbjct: 121 DGNYRETRWFSPWTKERQTEEYQLPRFAAQALGQETVPIGDAVIATLDTCLGYEICEELW 180 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 + KH+ A +N S Y +L+K H Sbjct: 181 NPRS--KHIDMSLAGVEIIVNGSGSYM-QLRKAH 211 >gi|55376903|ref|YP_134754.1| nitrilase [Haloarcula marismortui ATCC 43049] gi|55229628|gb|AAV45048.1| nitrilase [Haloarcula marismortui ATCC 43049] Length = 366 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 27/169 (15%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------- 52 K +A AQ+ PV D G + K R E+A R G D+++F E + GYP Sbjct: 4 KSFTLAAAQVEPVYHDKEGTLDKTCRYIEQAGRDGADIVVFPETYFPGYPYWRGSVSISR 63 Query: 53 PEDLV--FKKSFIQACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAG 106 DL+ +K+ + AI+ L + +V+G RQ E + NS+ D Sbjct: 64 WTDLMVDLQKNSLHVDDEAIEILGEAVAEADLTLVLGTNEISDRQGSETLYNSLFYFDNT 123 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVF----RDI-RLGILIC 150 + R + +P HE+R DP D+ RLG LIC Sbjct: 124 GELMGRHRKLMPT----HEERAIWG--RGDPSSLATYETDVGRLGGLIC 166 >gi|332285628|ref|YP_004417539.1| NAD synthetase [Pusillimonas sp. T7-7] gi|330429581|gb|AEC20915.1| NAD synthetase [Pusillimonas sp. T7-7] Length = 291 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 44/266 (16%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTS 332 V L DY+ + +++G+SGG+DS + ++ A+ G + LPY Sbjct: 47 VTFLADYLISSGARALVLGISGGVDSLVGGCLSQRAVERVRKQGGAATFVAMRLPYGEQR 106 Query: 333 PQSLEDAAACAKALGCKY----DVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 + DA A + + ++ P D ++ + + F + NI++R R Sbjct: 107 DE--HDAQASLDLIQADHLATVNIKPAADAMLESVVASGTVFRDAAHQDFLHGNIKARQR 164 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ +++ T + +E +G+ T +GD + PL L K +V LA Sbjct: 165 MIAQYAVAGAHGGLVVGTDHAAEALMGFFTKFGDGAADVTPLTGLNKRRVRALA------ 218 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIKRIVENEESF 503 L P S++ K P+A+L P + D+E+ Y +DD + E Sbjct: 219 --------LAMGAPASLVMKVPTADLESLAPLKPDEEAFGVTYDEIDDFL-------EGK 263 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKR 529 +DQ Y ET+ + H GSE+KR Sbjct: 264 KVSDQAY--ETILRIYH---GSEHKR 284 >gi|323337295|gb|EGA78548.1| Qns1p [Saccharomyces cerevisiae Vin13] Length = 714 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 120/594 (20%), Positives = 205/594 (34%), Gaps = 129/594 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ + A +G L + EL I+GY D + Sbjct: 5 ITLATCNLNQWALDFEGNRDRILQSIKIAKERGARLRVGPELEITGYGCLDHFXENDVCL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + G + +G P + N ++ G I+ +R KI L N + Sbjct: 65 HSWEMYAQIIKNKETHGLILDIGMPVLHKNVRYNCRLLSLDGEILFIRPKIWLANDGNYR 124 Query: 125 EKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F ++G + + I D +G CE+++ + Sbjct: 125 EMRFFTPWMKPGVVEDFILPPEIQKVTGQRLVPFGDAVINSLDTCIGTETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + + S + KL KR +++ +Y NQ G D L +DG Sbjct: 185 HIAMSLDGVEIMTNSSGSHHELRKLNKRLDLILNATKRCGGVYLYANQRGCDGDRLYYDG 244 Query: 219 ASF------------------------CFDGQQQLAFQMKHFSE--QNFMTEWHYDQ--- 249 + D ++ ++++ S Q + E + + Sbjct: 245 CALIAINGTIVAQGSQFSLDDVEVVTATVDLEEVRSYRVAVMSRGLQASLAEIKFKRIDI 304 Query: 250 --QLSQWNYMSDDSAST------MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +L+ D + Y +EE A AC + DY+++ N + LSG Sbjct: 305 PVELALMTSRFDPTVCPTKVREPFYHSPEEEIALGPACWMW--DYLRRCNGTGFFLPLSG 362 Query: 302 GIDSALCAAI-------AVDALGKENVQTIMLPYKYT---------SPQSLED------- 338 GIDS A I DA N Q I K T SPQ L Sbjct: 363 GIDSCATAMIVHSMCRLVTDAAQNGNEQVIKDVRKITRSGDDWIPDSPQDLASKIFHSCF 422 Query: 339 -------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 A + A+G + L + LV+ SL ++P Sbjct: 423 MGTENSSKETRNRAKDLSNAIGSYHVDLKMDSLVSSVVSLFEVATGKKPIYKIFGGSQIE 482 Query: 376 GIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +NIQ+R+R + + + N ++L ++N E GY T Y S Sbjct: 483 NLALQNIQARLRMVLSYLFAQLLPWVRGIPNSGGLLVLGSANVDECLRGYLTKYDCSSAD 542 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + ++ + I L +P+AEL P D Sbjct: 543 INPIGGISKTDLKRFIAYASKQ--------YNMPILNDFLNATPTAELEPMTKD 588 >gi|296158093|ref|ZP_06840926.1| NAD+ synthetase [Burkholderia sp. Ch1-1] gi|295891861|gb|EFG71646.1| NAD+ synthetase [Burkholderia sp. Ch1-1] Length = 286 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 28/226 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKEN--VQTIMLPYKYTSPQSLE 337 L +Y++ N ++G+SGG+DS A +AV+ L E+ Q I + Y + Sbjct: 36 LANYLRSNGLKTYVLGISGGVDSTTAGRLAQLAVERLRAEHYEAQFIAIRLPYGEQKDEA 95 Query: 338 DAAACAKALGCKY----DVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILM 392 DA + + + D+ P D + +E V NI++R R Sbjct: 96 DAQQALRFIRADHNLAIDIKPAADAMLAALDKSGVLFNDESQQDFVHGNIKARQRMIAQY 155 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A+++ +++ T + +E +G+ T +GD PL L K +V + Sbjct: 156 AVASARAGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLNKRRV---------RAVAKA 206 Query: 453 LGPLTEVIPPSILEKSPSAE---LRPHQTDQESLP-PYPILDDIIK 494 LG P + K P+A+ LRP + D+++ PY +DD ++ Sbjct: 207 LG-----APEELAHKVPTADLEMLRPQRPDEDAYGIPYDAIDDFLE 247 >gi|218554306|ref|YP_002387219.1| NAD synthetase [Escherichia coli IAI1] gi|226723168|sp|B7M1F2|NADE_ECO8A RecName: Full=NH(3)-dependent NAD(+) synthetase gi|218361074|emb|CAQ98657.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli IAI1] Length = 275 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + +PY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRMPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LTALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNVPEQVARTIENWYLKTEHKRR 263 >gi|242371780|ref|ZP_04817354.1| NAD synthetase [Staphylococcus epidermidis M23864:W1] gi|242350481|gb|EES42082.1| NAD synthetase [Staphylococcus epidermidis M23864:W1] Length = 281 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 45/267 (16%) Query: 251 LSQW----NYMSDDSASTMYIPLQ-EEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGID 304 L +W + + D M + Q + E + N ++ YVQ ++F K +++G+SGG D Sbjct: 2 LRKWRKKMSKLQDIVVKEMKVKKQIDSEKEINEIKHFIKSYVQSHSFIKSLVLGISGGQD 61 Query: 305 SALCAA---IAVDALGKENVQ----TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 S L +AV+ L +E + + LPY +DA AL + P Sbjct: 62 STLTGKLVQLAVNELREEGRECKFIAVKLPYGIQ-----KDADEVEDALKF---IEPDEI 113 Query: 358 LVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRGNILMALSNHSKAMLLTTSNKSEI 411 + + + Q +Q + GIV + Q +R R + +++++ +++ T + +E Sbjct: 114 ITVNIKPAVDQSVQSLKEEGIVLTDFQRGNEKARERMKVQFSIASNQSGIVVGTDHSAEN 173 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 G+ T YGD + P+ L K Q QL + + P + EK P+A Sbjct: 174 ITGFYTKYGDGAADIAPIFGLDKRQGKQLLEYLKA--------------PKHLYEKVPTA 219 Query: 472 EL---RPHQTDQESLP-PYPILDDIIK 494 +L +P D+E+L Y +DD ++ Sbjct: 220 DLEDDKPQLPDEEALGVTYDQIDDYLE 246 >gi|212709690|ref|ZP_03317818.1| hypothetical protein PROVALCAL_00738 [Providencia alcalifaciens DSM 30120] gi|212687501|gb|EEB47029.1| hypothetical protein PROVALCAL_00738 [Providencia alcalifaciens DSM 30120] Length = 277 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 15/224 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++K+A+AQ N +G+ GN+ + + E+A QG LI F EL +GY + L K + Sbjct: 5 RVKVALAQFNSELGNKTGNLQRMAQLCEQAASQGAKLICFPELATTGYRGDLLSTKLWDL 64 Query: 64 QAC-SSAIDTLKSDTHDG-GAGIVVGFP-RQDQEG-VLNSVVILDAG--NIIAVRDKINL 117 S D L S IV GF R ++ G V N+V + + G NI V K++ Sbjct: 65 SDFEGSETDCLFSQLASRLDITIVSGFAERGERLGEVYNAVGVWNPGCENISGVFRKVHA 124 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 EK+ F SG S P+ I ++G++IC D+ + + L QGAE L + +A Sbjct: 125 FGI----EKQWFKSGDSF-PVFETPIGKIGVMICYDM-GFPEVARILTLQGAELLIAPSA 178 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + + + HL + VN+ G +++L G S Sbjct: 179 WCIQDRDMWDINTACRALENGTHL--LAVNRWGHEEDLHLFGGS 220 >gi|291282919|ref|YP_003499737.1| NAD synthase [Escherichia coli O55:H7 str. CB9615] gi|209768644|gb|ACI82634.1| NAD synthetase [Escherichia coli] gi|290762792|gb|ADD56753.1| NAD synthase [Escherichia coli O55:H7 str. CB9615] Length = 275 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A+ G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAISELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + + R +E+ +E+KRR Sbjct: 240 G-KNVPQQVARTIENWYLKTEHKRR 263 >gi|325473958|gb|EGC77146.1| glutamine-dependent NAD+ synthetase [Treponema denticola F0402] Length = 650 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 33/278 (11%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQ-----TIMLPYKYTSPQSLEDAAACAKALGC 348 K ++G+SGG+DS+L + AL N+ I +P T+ ++ +A+A AK LGC Sbjct: 348 KCLVGISGGLDSSLALLASAYALKLLNIDFKNLYAITMPGFGTTEKTKTNASALAKTLGC 407 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +PI + FS + Q + + I EN Q+R R ILM +N +++ + + Sbjct: 408 TLLEIPIEKAMLQHFSDIGQ--EIDNHDIAYENAQARERTQILMDKANQIDGIMVGSGDL 465 Query: 409 SEISVGYGTLYGDMSGGF----NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 SE ++G+ T GD + + K L K + A + E++ +I Sbjct: 466 SESALGWMTYGGDQMSMYEVNSSIPKTLLKNCILAFAENKIFFEDEKKNNAFFELL-SNI 524 Query: 465 LEKSPSAELRP------HQTDQESLPPYPILDDIIKRIVENE-----------ESFINND 507 + S EL P Q ++ + PY + D I + N E+F N+ Sbjct: 525 INTPVSPELLPPENGEISQKTEDIIGPYELHDFFIYHAIGNGFSPKKVYFLACEAFKNSS 584 Query: 508 QEYNDETVRYVEHL---LYGSEYKRRQAPVGTKITAKS 542 D+ ++++ + ++KR +P G +T S Sbjct: 585 YS-KDDILKWLNLFYKRFFSQQFKRSCSPEGASVTGFS 621 >gi|213963377|ref|ZP_03391633.1| NAD+ synthetase [Capnocytophaga sputigena Capno] gi|213954045|gb|EEB65371.1| NAD+ synthetase [Capnocytophaga sputigena Capno] Length = 259 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 44/207 (21%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS----LED 338 ++ Y + ++IG+SGG+DSA+ + + + + T+ L +S E+ Sbjct: 12 IKTYAENARVKGLVIGISGGVDSAVVSTLC----ARTGLPTLCLEMPIHQAESHVSRAEE 67 Query: 339 AAACAKA-----LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG------IVAENIQSRIR 387 A KA + D+ P+ D QF+ + P + N ++R+R Sbjct: 68 HIAFLKAHYPNVSNLRTDLTPVFD----------QFVAQIPPTDKSTYEMALANTRARLR 117 Query: 388 GNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 L + +++ T NK E VG+ T YGD +P+ DL K++V++L + Sbjct: 118 MTTLYYFAGLEGYIVVGTGNKIEDFGVGFFTKYGDGGVDISPIADLMKSEVYKLGEYLQ- 176 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL 473 IP SIL+ PS L Sbjct: 177 -------------IPQSILKAKPSDGL 190 >gi|325002648|ref|ZP_08123760.1| putative hydrolase [Pseudonocardia sp. P1] Length = 221 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 30/225 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q+ P D+AGN+ R +A G+DL++ E+F++GY + + Sbjct: 1 MRIALLQVEPGSRDVAGNL----RRLADACGAGVDLVVTPEMFLTGYD-----IGAAAVH 51 Query: 65 ACSSAIDTLKSDTHDG-----GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 A + D + G G ++ G+P + V ++V ++ D L Sbjct: 52 ALAEPADGPSAAAVAGIARRTGTAVLYGYPERSGRAVFDAVQLVGP-------DGTRLAG 104 Query: 120 YSEFH-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 Y + H ++ F +G P+V LG+LIC D+ + + L GA+ + Sbjct: 105 YRKTHLFGDLDRSVFEAGDDPPPVVELHGWGLGLLICYDV-EFPETVRGLALAGADVVLV 163 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 A+ ++ + + +V + + + Y N VG + L + G Sbjct: 164 PTANMLPYDAVPE--VLVPARAHENQVYVAYANFVGREGSLDYGG 206 >gi|315225158|ref|ZP_07866975.1| NAD+ synthetase [Capnocytophaga ochracea F0287] gi|314944841|gb|EFS96873.1| NAD+ synthetase [Capnocytophaga ochracea F0287] Length = 256 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 28/199 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAA 341 ++ Y + ++IG+SGG+DSA+ + + + + T+ L +S + A Sbjct: 12 IKTYAENARVKGLVIGVSGGVDSAVVSTLC----ARTGLPTLCLEMPIHQAESHVSRAQE 67 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG------IVAENIQSRIRGNILMALS 395 + L Y +++L + QF+ + P + N ++R+R L + Sbjct: 68 HIEFLKTHYP--NVNNLRVDLTPVFDQFVTQIPPTDKSTYEMALANTRARLRMTTLYYFA 125 Query: 396 NHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T NK E VG+ T YGD +P+ DL K++V++L + + Sbjct: 126 GLESYIVVGTGNKIEDFGVGFFTKYGDGGVDISPIADLMKSEVYKLGEYLH--------- 176 Query: 455 PLTEVIPPSILEKSPSAEL 473 IP SIL+ PS L Sbjct: 177 -----IPKSILKAKPSDGL 190 >gi|77360775|ref|YP_340350.1| Beta-ureidopropionase [Pseudoalteromonas haloplanktis TAC125] gi|76875686|emb|CAI86907.1| Beta-ureidopropionase [Pseudoalteromonas haloplanktis TAC125] Length = 297 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 28/263 (10%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKSDTHD 79 N+AK+ A EA +G L++ EL S Y ED+ + TL + Sbjct: 23 NMAKSIAAIREAANKGAKLVVLQELHRSLYFCQTEDVDVFDLAETIPGPSTHTLGELAKE 82 Query: 80 GGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSND 136 IV + G+ + +VV+ + G+I K+++P+ F+EK F G + Sbjct: 83 LSIVIVASLFEKRATGLYHNTAVVLENDGSIAGKYRKMHIPDDPGFYEKFYFTPGDLGFE 142 Query: 137 PIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-----YHNKLKKRHEIV 191 PI +LG+L+C D W + + GAE L A + + +++ V Sbjct: 143 PIQTSVGKLGVLVCWDQW-FPEAARLMAMAGAELLIYPTAIGWDPRDDSDEQTRQKDAWV 201 Query: 192 TGQISHV---HLPIIYVNQVGGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNF 241 Q +H +P+I N+VG + + + F G SF Q +L + + EQ Sbjct: 202 ISQRAHAIANGVPVISCNRVGVEQDPSEQSEGIQFWGNSFIAGPQGELLAEANNTDEQIL 261 Query: 242 MTEWHYDQQLSQ-----WNYMSD 259 + E DQQ S+ W Y+ D Sbjct: 262 VIE--LDQQRSENVRRIWPYLRD 282 >gi|254286697|ref|ZP_04961652.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae AM-19226] gi|150423281|gb|EDN15227.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae AM-19226] Length = 276 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS C A +AV+ L +++ T + LPY Q ED A A Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPY---GEQKDEDEAQLALS 96 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H +H + + + +P+ I + N+++R R + Sbjct: 97 FIRPTHSVSVNIKAGVDGLHAASHHALA-NTGLIPSDPAKIDFIKGNVKARARMVAQYEI 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 156 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLLAKTLGA-------- 207 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 208 ------PEQLVCKTPTADLEELAPQKADEAALNLTYEQIDDFLE 245 >gi|104783852|ref|YP_610350.1| NAD synthetase [Pseudomonas entomophila L48] gi|122401643|sp|Q1I469|NADE_PSEE4 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|95112839|emb|CAK17567.1| NAD synthetase, prefers NH3 over glutamine [Pseudomonas entomophila L48] Length = 275 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 35/209 (16%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSPQSLEDAAA 341 +++G+SGG+DS A +A A+ + +T + LPY+ + DA A Sbjct: 43 RLKTLVLGISGGVDSLTAALLAQRAINELRSETGDAGYRFIAVRLPYQVQHDE--HDAQA 100 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQ---FLQEEPSGI--VAENIQSRIRGNILMALSN 396 C + + K D + D+ +L ++ PS + V NI++R R ++ Sbjct: 101 CLEVI--KADEVHTVDIAPAVRALAAETEALKGGSPSLVDFVVGNIKARTRMVAQYTIAG 158 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++ T + +E +G+ T +GD + PL L K QV +A S G Sbjct: 159 ARAGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIA---RSFG-------- 207 Query: 457 TEVIPPSILEKSPSA---ELRPHQTDQES 482 P S++EK P+A +L P + D+ S Sbjct: 208 ---APESLVEKVPTADLEDLEPGKPDEAS 233 >gi|20093310|ref|NP_619385.1| carbon-nitrogen hydrolase [Methanosarcina acetivorans C2A] gi|19918669|gb|AAM07865.1| carbon-nitrogen hydrolase [Methanosarcina acetivorans C2A] Length = 270 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 33/239 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE---DLVFKKS 61 +K A Q+N + N+ +A EEA + +L++F E+F +G+ + D+ S Sbjct: 5 MKAACIQMNISLCSKQENLERALSLAEEAVSREAELLVFPEVFSTGFCYDRIGDVAETTS 64 Query: 62 FIQACSSAIDTLKSDTHDGG---AGIVVGFPRQDQEGVLNSV-------VILDAGNIIAV 111 ++TL++ + + G AG ++ D G V +++G + + Sbjct: 65 -----GPTLETLRAFSREHGCILAGSMIEIREGDAPGSEKKVPSQYNLGFCIESGKLAGI 119 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAE 169 R K+ L EK F SG S PI + + +G+++C ++ + + + L +GA+ Sbjct: 120 RRKVQLYG----PEKEYFASGDSISPIKLQKYGLSIGLIVCNEL-RYPEVARKLVLEGAD 174 Query: 170 FLFSLNASP---YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 L S P Y ++ + Q+ H I N+VG I+ G SF DG Sbjct: 175 LLVSAADIPDFYIYPWRIMSFSRAIENQLPH-----IACNRVGKDRYSIYPGGSFIVDG 228 >gi|117920881|ref|YP_870073.1| NAD synthetase [Shewanella sp. ANA-3] gi|117613213|gb|ABK48667.1| NH(3)-dependent NAD(+) synthetase [Shewanella sp. ANA-3] Length = 296 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 43/227 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQ------TIMLPYKYTS 332 ++ +Q +++G+SGG+DS+ LC +AVD+L E+ + LPY+ Sbjct: 48 IKSKLQAARSKALVLGISGGVDSSTAGRLCQ-LAVDSLNSEHTDGGYQFIAVRLPYQIQK 106 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFF-SLMSQFLQ---EEPSG----IVAENIQS 384 + E AC K + +H V+ + ++ F++ P + N+++ Sbjct: 107 DEH-EAQQACQFIQPTKLVTINVHQGVDGVHQATLTAFVEAGLHSPDAAKVDFIKGNVKA 165 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R+R L+ +++ T + +E G+ T +GD + PL L K QV Q+A++ Sbjct: 166 RMRMIAQYELAGLVGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRQVAAYL 225 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 + P S++ K+P+A+L +Q P+L+D Sbjct: 226 GA--------------PESLVYKAPTADLEDNQ---------PLLED 249 >gi|308186633|ref|YP_003930764.1| NAD synthetase, prefers NH3 over glutamine [Pantoea vagans C9-1] gi|308057143|gb|ADO09315.1| NAD synthetase, prefers NH3 over glutamine [Pantoea vagans C9-1] Length = 274 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 54/283 (19%) Query: 268 PLQEEEADYNACVLSLRDYVQKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P + + + V L+ Y+++++ +++G+SGG DS L +A A+ + ++ Sbjct: 15 PAIDADQEVRVSVDFLKAYLKRHSGLKTLVLGISGGQDSTLAGKLAQTAISELRQESGDN 74 Query: 324 ------IMLPYKYTS-PQSLEDAAACAK-----ALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 + LPY + Q +DA A K + K VL + +S F Sbjct: 75 DYTFIAVRLPYGVQADEQDCQDALAFIKPDRSLVVNIKESVLASERALKDAGITLSDF-- 132 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 V N ++R R +++ +K +++ T + +E G+ T YGD NPL Sbjct: 133 ------VRGNEKARERMKAQYSIAGMTKGVVVGTDHAAEAVTGFFTKYGDGGTDINPLFR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K Q QL LG P + K P+A+L RP D+ +L Y Sbjct: 187 LNKRQGKQLLKH---------LG-----CPEHLYLKKPTADLEDDRPGLQDEVALGVTYE 232 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 ++DD + E IN D R +E +E+KRR Sbjct: 233 MIDDYL------EGKTINPD------NARIIEGWYLKTEHKRR 263 >gi|318057044|ref|ZP_07975767.1| putative hydrolase [Streptomyces sp. SA3_actG] gi|318079167|ref|ZP_07986499.1| putative hydrolase [Streptomyces sp. SA3_actF] Length = 286 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 96/240 (40%), Gaps = 32/240 (13%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 L++A+AQ + GD+ N+ A G L++ ELF+SGY PE ++ Sbjct: 9 PPLRLALAQSSGTPGDVHANLDALDALAARAASSGAHLLVTPELFLSGYAPEHRSPAETG 68 Query: 63 IQACSSAIDTLKSDTHDG----------------GAGIVVGFPRQDQEGVLNSVVILDA- 105 + S D G ++ G+P + NS ++ Sbjct: 69 VAGSRSEPDAPPLAALALEEAEAAAELGALARRHGLAVLAGYPERAGSATYNSALLAGPD 128 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV---FRDIRLGILICEDIWKNSNICKH 162 G +A K +L Y + E+ F +G + +V +RLG+LIC D+ N+ H Sbjct: 129 GAPLAAYRKTHL--YGPY-ERAVFTAG--DRAVVQAELHGVRLGVLICYDVEFPENVRAH 183 Query: 163 LKKQGAEFLFSLNA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 G E L A +PY + + + V S +H I YVN+ G + F G S Sbjct: 184 -ADAGTEVLLVPTALLAPY--DFVARSLVPVRAFESQLH--IAYVNRTGPEGGFDFVGLS 238 >gi|295697638|ref|YP_003590876.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Bacillus tusciae DSM 2912] gi|295413240|gb|ADG07732.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Bacillus tusciae DSM 2912] Length = 266 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 17/229 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q+ GD AGN A+A E+ D+++ E++ GY L I Sbjct: 1 MRVALCQMEVAQGDRAGNRARAETMVRESAGNRADVVVLPEMWTCGYDFAHLSEHTEEID 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL----- 117 ++ + L + G ++ G FP Q +GV N+ + G ++ + KI+L Sbjct: 61 GETATL--LGQWAREHGIWLIGGSFPIQFADGVSNTALTFAPDGTLVNLYRKIHLIGLMD 118 Query: 118 --PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + + + TF G P R G++IC D+ + + + +GAE LF L Sbjct: 119 EDRHLAPGESRATFAMGKPGTPPA---TRAGVMICYDL-RFPELARAHVLEGAEILF-LP 173 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 A R IV I + +I VN VG D F G S D Sbjct: 174 AEWPVQRADHWRTLIVARAIEN-QAYVIGVNIVGRNDRDRFAGGSLAMD 221 >gi|218288829|ref|ZP_03493080.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Alicyclobacillus acidocaldarius LAA1] gi|218240918|gb|EED08095.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Alicyclobacillus acidocaldarius LAA1] Length = 301 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 100/255 (39%), Gaps = 30/255 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A+AQ+ GD+ N+ K + EA+ + D +L EL ++G LV + ++ Sbjct: 12 LRVAVAQIAIADGDVEANLDKVAQVLCEASARRADFLLLPELCLTG-----LVAGDALVR 66 Query: 65 ACSSAIDTLKSDTHD----GGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKINLPN 119 ++ D G +P Q ++G L+ + ++D RD +L Sbjct: 67 LAEPPHGPMQQAMRDLARHHGVATAFSYPEQREDGRLHIATQVVD-------RDGRSLHV 119 Query: 120 YSEFH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--S 173 Y + H EK ++ G + P D G+L C D+ + + L G LF + Sbjct: 120 YRKTHLFAEEKVSYQPGDAIAPFSLWDWPSGLLTCYDV-EFPEPARQLALAGCRLLFVNA 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQQQLAF 231 N PY V + + ++Y N+VG + G S DG L Sbjct: 179 ANMEPYE----GVHRTFVAARAMENQIFVVYCNRVGANARYRYRGNSSVVAPDGTVLLDL 234 Query: 232 QMKHFSEQNFMTEWH 246 + + Q EW Sbjct: 235 GLDQEAVQCVDLEWQ 249 >gi|170702072|ref|ZP_02892987.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia ambifaria IOP40-10] gi|170133031|gb|EDT01444.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia ambifaria IOP40-10] Length = 281 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 19/227 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANR-QGMDLILFTELFISGYPPEDLVFKKSFI 63 +++ +AQL V GD+A N K E + G LI+F E +SG+P D V Sbjct: 1 MQVELAQLTLVDGDVAHNTRKVIDTIEHVDSASGTRLIVFPETTLSGFPTRDTV--ADVA 58 Query: 64 QACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 Q A+ ++ G + VG +D N+ V++D I +R Y + Sbjct: 59 QPLDGPALSAVRDAARQKGVSVAVGLAERDGGRFYNTTVLVDEQGDIVLR-------YRK 111 Query: 123 FH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 H + F G + + + +G+LIC DI + + + A+ L N + Sbjct: 112 THLWASDVGVFTPGDRFETCSWNGLTVGLLICYDI-EFPETARAVGALDADLLIVTNGNM 170 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFD 224 + +R + + + + VN+ G G D L F G S D Sbjct: 171 DPFGPVHRR--AIAARAMENQMFAVMVNRCGSGDDNLTFAGLSTLVD 215 >gi|315303621|ref|ZP_07874159.1| carbon-nitrogen family hydrolase [Listeria ivanovii FSL F6-596] gi|313628007|gb|EFR96602.1| carbon-nitrogen family hydrolase [Listeria ivanovii FSL F6-596] Length = 297 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 29/265 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFKKSF- 62 LKIA+ Q V A N+ A + +EA QG DL+LF E++ +GY P D F K Sbjct: 2 LKIALVQKKAVPNQKAVNLKLALQHIKEAANQGADLVLFPEMWSNGYAAPFDEAFDKPLH 61 Query: 63 --------------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 ++ S + LK + GI + + E N+ +++D G Sbjct: 62 PEFTDERTNWLDNGVEPNSEYVTALKKHAKEYQVGICATYLSKTAEKRQNTAIMIDRNGE 121 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 II K++ +F + G F I+LG++IC D + + L G Sbjct: 122 IILDYAKVHT---CDFSLECLLQHGTEFKICEFDGIKLGVMICFDR-EFPESARELMLNG 177 Query: 168 AEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 AE + NA +P N+L R E + G ++ + P Q ++FD Sbjct: 178 AEIILVPNACDMNPARINQLSTRAFENMVG-LAMANYPGHNWGQSCAFSPIVFDDYGNYL 236 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD 248 D L Q SE+ ++ E+ D Sbjct: 237 DN---LLLQADDVSEEIYIAEFDLD 258 >gi|171778136|ref|ZP_02919393.1| hypothetical protein STRINF_00228 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283118|gb|EDT48542.1| hypothetical protein STRINF_00228 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 274 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 40/231 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY++K++F K ++G+SGG DS+L +A A+ + +T + LPY + Sbjct: 30 LKDYMKKHSFLKSYVLGISGGQDSSLTGRLAQIAMEELRAETGDDSYKFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIR 387 + EDA K + + VN ++ Q + E +GI NI++R R Sbjct: 90 DE--EDAQRALKFIKPDVSIA-----VNIKEAVDGQVHELEKAGIDVSDFNKGNIKARQR 142 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ + ++ T + +E G+ T +GD PL L K Q QL Sbjct: 143 MITQYAVAGANSGAVIGTDHAAENITGFFTKFGDGGADVIPLYRLNKRQGKQL------- 195 Query: 448 GITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P+I EK P+A+L RP D+ +L Y +DD ++ Sbjct: 196 --LAELGA-----DPAIYEKIPTADLEENRPGIADEVALGVTYNDIDDYLE 239 >gi|332534805|ref|ZP_08410630.1| N-carbamoylputrescine amidase [Pseudoalteromonas haloplanktis ANT/505] gi|332035769|gb|EGI72255.1| N-carbamoylputrescine amidase [Pseudoalteromonas haloplanktis ANT/505] Length = 297 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 35/284 (12%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDL-VF-- 58 KL +A+ Q + + N+AK+ A EA ++G L++ EL S Y E++ VF Sbjct: 6 KLTVALVQQSNT-DNAQDNMAKSISAIREAAQKGAKLVVLQELHRSLYFCQTENVDVFDL 64 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 ++ S+A+ L + IV + G+ N+ V+L+ G+I K++ Sbjct: 65 AETIPGPSSNALGELAKEL---SIVIVASLFEKRATGLYHNTAVVLEQDGSIAGKYRKMH 121 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ F+EK F G +PI +LG+L+C D W + + GAE L Sbjct: 122 IPDDPGFYEKFYFTPGDIGFEPIQTSVGKLGVLVCWDQW-FPEAARLMAMAGAEVLIYPT 180 Query: 176 ASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQ-------DELIFDGAS 220 A + N + +++ V Q +H +P+I N+VG + D + F G S Sbjct: 181 AIGWDPNDDSAEQTRQKDAWVISQRAHAVANGVPVISCNRVGHESDPSAQSDGISFWGNS 240 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 F Q +L + + EQ + E DQ+ S+ W ++ D Sbjct: 241 FIAGPQGELLAEANNTDEQILVVE--IDQKRSENVRRIWPFLRD 282 >gi|118579175|ref|YP_900425.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pelobacter propionicus DSM 2379] gi|118501885|gb|ABK98367.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pelobacter propionicus DSM 2379] Length = 294 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 107/263 (40%), Gaps = 22/263 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 +K L++ + Q + D A N+ K+ A G +L++ EL Y ED Sbjct: 1 MKSLRVGLIQQS-CSADRAANLEKSCDMIARAAASGAELVVLQELHTGPYFCQTEDPSLF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINL 117 +TL G IV + G+ NS V+ + G++ + K+++ Sbjct: 60 DLAEPIPGPTCETLGPLAARLGVVIVASLFERRAPGLYHNSAVVFERDGSMAGMYRKMHI 119 Query: 118 PNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ F+EK F G PI +LG+L+C D W + + GA+ L A Sbjct: 120 PDDPGFYEKFYFTPGDLGFAPIQTSLGKLGVLVCWDQW-YPEAARLMALAGADLLIYPTA 178 Query: 177 SPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVG-------GQDELIFDGASF 221 + + ++R VT Q H LP++ VN+VG ++ ++F G SF Sbjct: 179 IGWDPADSAEEQARQRDAWVTVQRGHTVANGLPLLAVNRVGLEASTEKPENGILFWGTSF 238 Query: 222 CFDGQQQLAFQMKHFSEQNFMTE 244 Q ++ Q E+ + E Sbjct: 239 AAGPQGEILTQASQDREEVVLVE 261 >gi|311279853|ref|YP_003942084.1| NAD+ synthetase [Enterobacter cloacae SCF1] gi|308749048|gb|ADO48800.1| NAD+ synthetase [Enterobacter cloacae SCF1] Length = 275 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 46/264 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L + A+ G + +Q + LPY + Sbjct: 30 LKSYLKTYPFIKSLVLGISGGQDSTLAGKLCQTAISELRDETGDQTLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN S+++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAISF---IQPDRVLTVNIKGSVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ +K +++ T + +E G+ T YGD NPL L K Q QL + Sbjct: 142 RMKAQYSIAGMTKGVVVGTDHAAEALTGFFTKYGDGGTDINPLFRLNKRQGKQLLAR--- 198 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 LG P + K+P+A+L + D+ SLP L EN + ++ Sbjct: 199 ------LG-----CPEHLYNKAPTADL---EDDRPSLPDEAAL----GVTYENIDDYLEG 240 Query: 507 DQEYNDETVRYVEHLLYGSEYKRR 530 + + T + +E+ +E+KRR Sbjct: 241 -KTLDAGTAKIIENWYLKTEHKRR 263 >gi|241889177|ref|ZP_04776480.1| NAD+ synthetase [Gemella haemolysans ATCC 10379] gi|241864014|gb|EER68393.1| NAD+ synthetase [Gemella haemolysans ATCC 10379] Length = 273 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 39/241 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKE-----NVQTIMLPYKYTSP 333 L+DY++KNNF K +++G+SGG DS LC + A+ L +E N + LPY Sbjct: 30 LKDYIKKNNFIKSLVLGISGGQDSTLCGKLCQMAITELREETGEEYNFIAVRLPY---GQ 86 Query: 334 QSLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 Q ED C AL K + I D V+ + + + E + N ++R R Sbjct: 87 QFDED--DCNDALKFINPDKVFTVNIKDAVDASVNSL-KVAGVEITDFAKGNEKARERMK 143 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +++ +K +++ T + +E G+ T +GD PL L K Q L + Sbjct: 144 AQYSIATMNKGIVVGTDHAAEAITGFFTKHGDGGADIVPLYRLNKRQGKALLKMLDC--- 200 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESF 503 P + K P+A+L RP D+ +L Y +DD + K ++ N + Sbjct: 201 -----------PEHLYLKQPTADLEEDRPALEDEVALGVTYNDIDDYLEGKEVLNNVKEI 249 Query: 504 I 504 I Sbjct: 250 I 250 >gi|78212641|ref|YP_381420.1| nitrilase [Synechococcus sp. CC9605] gi|78197100|gb|ABB34865.1| probable nitrilase [Synechococcus sp. CC9605] Length = 332 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 24/186 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PEDL 56 + +K+A AQ+ PV+ + G++ K A EA QG++LI+F E F+ YP + Sbjct: 1 MTTVKVAAAQIRPVLFSLDGSLQKVLDAMAEAAAQGVELIVFPETFLPYYPYFSFVEPPV 60 Query: 57 VFKKSFIQACSSAI-------DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNI 108 + +S + A+ D + + G +++G +D + N+ ++ ++ G + Sbjct: 61 LMGRSHLALYEQAVVVPGPVTDAVAAAASQYGMQVLLGVNERDGGTLYNTQLLFNSCGEL 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKH--LK 164 + R KI P Y HE+ + G + V + R+G L C W++ N L Sbjct: 121 VLKRRKIT-PTY---HERMVWGQGDGSGLKVVQTPLARVGALAC---WEHYNPLARYALM 173 Query: 165 KQGAEF 170 QG E Sbjct: 174 AQGEEI 179 >gi|15600976|ref|NP_232606.1| NAD synthetase [Vibrio cholerae O1 biovar eltor str. N16961] gi|121586713|ref|ZP_01676496.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 2740-80] gi|121727752|ref|ZP_01680840.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae V52] gi|147671819|ref|YP_001215857.1| NAD synthetase [Vibrio cholerae O395] gi|153816786|ref|ZP_01969453.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae NCTC 8457] gi|153822638|ref|ZP_01975305.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae B33] gi|153825045|ref|ZP_01977712.1| NAD+ synthetase [Vibrio cholerae MZO-2] gi|153829640|ref|ZP_01982307.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 623-39] gi|227811829|ref|YP_002811839.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae M66-2] gi|254225213|ref|ZP_04918826.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae V51] gi|254850594|ref|ZP_05239944.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae MO10] gi|255745986|ref|ZP_05419933.1| NAD synthetase [Vibrio cholera CIRS 101] gi|262163456|ref|ZP_06031202.1| NAD synthetase [Vibrio cholerae INDRE 91/1] gi|262167357|ref|ZP_06035066.1| NAD synthetase [Vibrio cholerae RC27] gi|262192109|ref|ZP_06050271.1| NAD synthetase [Vibrio cholerae CT 5369-93] gi|297579673|ref|ZP_06941600.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae RC385] gi|298500059|ref|ZP_07009865.1| NAD+ synthetase [Vibrio cholerae MAK 757] gi|25090803|sp|Q9KMW1|NADE_VIBCH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030737|sp|A5EYT7|NADE_VIBC3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766724|sp|C3LUM7|NADE_VIBCM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|9657599|gb|AAF96119.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549010|gb|EAX59047.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 2740-80] gi|121629969|gb|EAX62379.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae V52] gi|125622312|gb|EAZ50633.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae V51] gi|126512589|gb|EAZ75183.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae NCTC 8457] gi|126519837|gb|EAZ77060.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae B33] gi|146314202|gb|ABQ18742.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae O395] gi|148874868|gb|EDL73003.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 623-39] gi|149741370|gb|EDM55404.1| NAD+ synthetase [Vibrio cholerae MZO-2] gi|227010971|gb|ACP07182.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae M66-2] gi|227014877|gb|ACP11086.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae O395] gi|254846299|gb|EET24713.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae MO10] gi|255735740|gb|EET91138.1| NAD synthetase [Vibrio cholera CIRS 101] gi|262024241|gb|EEY42933.1| NAD synthetase [Vibrio cholerae RC27] gi|262028023|gb|EEY46682.1| NAD synthetase [Vibrio cholerae INDRE 91/1] gi|262032020|gb|EEY50596.1| NAD synthetase [Vibrio cholerae CT 5369-93] gi|297535319|gb|EFH74153.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae RC385] gi|297542040|gb|EFH78091.1| NAD+ synthetase [Vibrio cholerae MAK 757] Length = 276 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS C A +AV+ L +++ T + LPY Q ED A A Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPY---GEQKDEDEAQLALS 96 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H +H + + + +P+ + + N+++R R + Sbjct: 97 FIRPTHSVSVNIKAGVDGLHAASHHALA-NTGLIPSDPAKVDFIKGNVKARARMVAQYEI 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 156 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLLAKTLGA-------- 207 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 208 ------PEQLVYKTPTADLEELAPQKADEAALNLTYEQIDDFLE 245 >gi|239999107|ref|ZP_04719031.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae 35/02] gi|240080546|ref|ZP_04725089.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae FA19] gi|240115840|ref|ZP_04729902.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID18] gi|240118138|ref|ZP_04732200.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID1] gi|240123687|ref|ZP_04736643.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID332] gi|240128388|ref|ZP_04741049.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae SK-93-1035] gi|260440344|ref|ZP_05794160.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae DGI2] Length = 263 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 14/171 (8%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLE 337 V L +Y + N ++G+SGGIDSA+ + +A + T++L P + P LE Sbjct: 11 VRWLDEYAAQANAKGFVVGVSGGIDSAVVSTLAA----RTGRTTLLLDMPIR-QHPGQLE 65 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 A + L +Y + + F Q + + + N +SR+R L Sbjct: 66 RARRHIRNLQGQYANVSAQTANLTDTFQTFEQTVGVHQTAFANQPLSLANARSRLRMLTL 125 Query: 392 MALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 126 YYYGQIHGLLVTGTGNKVEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 176 >gi|194098817|ref|YP_002001880.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae NCCP11945] gi|193934107|gb|ACF29931.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae NCCP11945] Length = 279 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PY 328 + +A V L +Y + N ++G+SGGIDSA+ + +A + T++L P Sbjct: 18 DTQAVITHIVRWLDEYAAQANAKGFVVGVSGGIDSAVVSTLAA----RTGRTTLLLDMPI 73 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NI 382 + P LE A + L +Y + + F Q + + + N Sbjct: 74 R-QHPGQLERARRHIRNLQGQYANVSAQTANLTDTFQTFEQTVGVHQTAFANQPLSLANA 132 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +SR+R L ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 133 RSRLRMLTLYYYGQIHGLLVTGTGNKVEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 192 >gi|39936449|ref|NP_948725.1| amidohydrolase [Rhodopseudomonas palustris CGA009] gi|39650304|emb|CAE28827.1| possible amidohydrolase [Rhodopseudomonas palustris CGA009] Length = 557 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 9/177 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++ + A Q +GD NIA A R E+A RQG +LI+F E +GY + + Sbjct: 4 RRFRAAAVQTLAKLGDFDFNIALATRYVEDAARQGAELIVFPECMDTGYLFDSPEHCREL 63 Query: 63 IQACSSA--IDTLKSDTHDGGAGIVVGFPRQD--QEGVLNSVVILDAGNIIAVRDKINLP 118 + + + L + + G I G D +E + N+ ++ D +A Sbjct: 64 AETLTDGPFVKALAALSRKHGVYIASGITEWDPAKEKIFNTGIMFDRKGEVACHYH---K 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 + H++ F G P+V D+ ++G+LIC D + I + + QGAE + + Sbjct: 121 QFLATHDQNWFAFGERGCPVVETDLGKIGLLICFD-GRIPEIFRAMTMQGAEVIVDM 176 >gi|332292519|ref|YP_004431128.1| NAD+ synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332170605|gb|AEE19860.1| NAD+ synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 269 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 9/166 (5%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L++Y +IG+SGGIDSAL + + A V + +P + + + A Sbjct: 14 LKEYATNARMTGFVIGISGGIDSALTSTLC--AKTGLRVLCVEMPI-HQDERQVTRAKEH 70 Query: 343 AKALGCKY-DVLPIH-DLVNHFFSLMSQFLQEEPS---GIVAENIQSRIRGNILMALSNH 397 L ++ +V + +L F L S E S + N ++R+R + L + Sbjct: 71 INQLKKRFANVSSLEVNLTETFEQLKSAVPTAEDSEQLNLSLANTRARLRMSTLYYFAGL 130 Query: 398 SKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 K ++ T NK E VG+ T YGD +P+ DL K++VF+LA+ Sbjct: 131 HKYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVFELAA 176 >gi|188996720|ref|YP_001930971.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931787|gb|ACD66417.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurihydrogenibium sp. YO3AOP1] Length = 295 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 27/266 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + K+ + + Q+ D+ N K ++ R G ++I ELF S Y ED + Sbjct: 1 MDKVNVGLIQMK-CSDDVEENFEKTLEKIKDLARNGANIICTQELFKSKYFCQVEDWSYF 59 Query: 60 K--SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKI 115 K I S I TL++ D I+ + EG+ N+ V++DA G+ + K+ Sbjct: 60 KLAEEINENSKTIKTLQTMAKDLKVVIIASLFEKRTEGIYHNTAVVIDADGSYLGKYRKM 119 Query: 116 NLPNYSEFHEKRTFIS---GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 ++P+ F+EK F GY + DI GILIC D W + GA+ LF Sbjct: 120 HIPDDPHFYEKFYFTPGDLGYKTFKTKYADI--GILICWDQWY-PEAARLTALSGAKILF 176 Query: 173 SLNASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 A + ++ +++ H + G + + Y G + + F G Sbjct: 177 YPTAIGWLPSEKEEFGNSQYNAWETIQRSHAVANGCYAVAINRVGYEESPDGNEGIEFWG 236 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTE 244 SF + +L + E+N + E Sbjct: 237 QSFVSNPYGELLVKGSVDKEENIICE 262 >gi|109899468|ref|YP_662723.1| NAD synthetase [Pseudoalteromonas atlantica T6c] gi|109701749|gb|ABG41669.1| NH(3)-dependent NAD(+) synthetase [Pseudoalteromonas atlantica T6c] Length = 276 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 39/249 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---- 323 P + E++ V ++ ++ + +++G+SGGIDS +A A+ + N + Sbjct: 14 PQIDVESEVQTRVNFIKSHLVASGLKTLVLGISGGIDSCTLGRLAQIAVNQLNSPSSSDY 73 Query: 324 ----IMLPYKYTSPQSLEDAAACA-----KALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 + LPYK Q+ ED A + + +V P D ++ S P Sbjct: 74 QFVAVRLPYKV---QADEDDAQLSIDFIQPSQSISVNVQPGADAIDEQTSKALSDAGILP 130 Query: 375 SG-----IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 + V N+++R R + ++ ++L T + +E G+ T YGD + P+ Sbjct: 131 ASDTKRDFVKGNVKARTRMVVQYEIAGMLDGLVLGTDHSAENITGFYTKYGDGACDLAPM 190 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-P 485 L K QV Q+AS+ + P +++ K+P+A+L P + D+++L Sbjct: 191 FGLNKRQVRQVASYLGA--------------PDNLVHKAPTADLESLSPQKADEQALGMS 236 Query: 486 YPILDDIIK 494 Y +DD ++ Sbjct: 237 YDDIDDFLE 245 >gi|213965856|ref|ZP_03394047.1| NAD+ synthetase [Corynebacterium amycolatum SK46] gi|213951434|gb|EEB62825.1| NAD+ synthetase [Corynebacterium amycolatum SK46] Length = 346 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 112/266 (42%), Gaps = 45/266 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDAL--GKENVQ--TIMLPYKYTSPQS 335 L DY + ++G+SGG DS L A +AV+ L G E+ I LP+ Q+ Sbjct: 103 LCDYFHAAHAKGFVLGISGGQDSTLAGRLAQLAVEKLRDGGEDATFIAIRLPHGV---QA 159 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE----NIQSRIRGNIL 391 ED A A L I D+ ++ +Q +++ NI++R+R Sbjct: 160 DEDDAQVALQFIQPDQRLTI-DIEPATAAMTTQVTDALAGSAISDFNKGNIKARMRMIAQ 218 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ A+++ T + +E G+ T +GD + PL+ L K R + Sbjct: 219 YAVAGVDGALVIGTDHAAEAVTGFYTKHGDGACDLVPLQGLNK---------RQGAALLR 269 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINND 507 LG P S EK P+A+L RP D+ +L Y +DD ++ Sbjct: 270 HLG-----APASTWEKVPTADLEEDRPALPDEVALGVTYTAIDDYLE------------G 312 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAP 533 + +DE +EHL S +KR P Sbjct: 313 KAVSDEDAARIEHLYSISRHKRAVPP 338 >gi|153801620|ref|ZP_01956206.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae MZO-3] gi|124122876|gb|EAY41619.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae MZO-3] Length = 276 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS C A +AV+ L +++ T + LPY Q ED A A Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEELNQQHHTTEYQFIAVRLPY---GEQKDEDEAQLALS 96 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H +H + + + +P+ I + N+++R R + Sbjct: 97 FIRPTHSVSVNIKAGVDGLHAASHHALA-NTGLIPSDPAKIDFIKGNVKARARMVAQYEI 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 156 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLLAKTLGA-------- 207 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 208 ------PEQLVCKTPTADLEELAPQKADEAALNLTYEQIDDFLE 245 >gi|26989738|ref|NP_745163.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida KT2440] gi|24984630|gb|AAN68627.1|AE016492_16 carbon-nitrogen hydrolase family protein [Pseudomonas putida KT2440] Length = 247 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 19/239 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ QL + GD+ GN+ + E+A G +L++F EL ++GY P V +++ + Sbjct: 1 MKLCAVQLASLKGDLPGNLQRHLVCIEQAAALGAELVVFPELSLTGYEPS--VARQAALP 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL--DAGNIIAVRDKIN---LPN 119 S+ +D L++ G + VG P +G+ + I +A + + +++ LP Sbjct: 59 VTSARLDPLQAACDRLGITVAVGLPLPTPDGLRIGMPIFCPEAPRQVYAKQRLHDDELPY 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 ++ + G + R+ IC + ++ ++ +L S+ + Sbjct: 119 FTPGDQALLLEVG---------EHRVAPAICYESMFLAHAAVARERGADLYLVSVAKT-- 167 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 +++ + + +P++ N VG D I G S +D Q L + SE Sbjct: 168 -AKGIREGYAHYPEVARELGMPVLMANCVGPADTFIGAGGSAAWDSQGHLLASLDDHSE 225 >gi|330448276|ref|ZP_08311924.1| NH(3)-dependent NAD(+) synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492467|dbj|GAA06421.1| NH(3)-dependent NAD(+) synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 278 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 34/228 (14%) Query: 287 VQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE----NVQTIMLPYKYTSPQSLEDA 339 ++++ +++G+SGG+DS C A +A+D L E + Q I + Y Q ++A Sbjct: 32 LKQSGCKSLVLGISGGVDSTTCGRLAQLAIDGLNTETNTNDYQFIAVRLPYGEQQDEDEA 91 Query: 340 AACAKALGCKYDV-LPIHDLVN-----HFFSLMSQFL---QEEPSGIVAENIQSRIRGNI 390 + + + V + I D V+ F+L L E V N+++R R Sbjct: 92 QLALRFIKPSHSVSVNIKDGVDGTHASTLFALEGTGLIPADEAKVDFVKGNVKARTRMIA 151 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 ++ ++L T + +E G+ T +GD + PL L K QV ++A+ + Sbjct: 152 QYEIAGLVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRKVAAKLGA---- 207 Query: 451 SGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K P+A EL P + D+++L Y +DD ++ Sbjct: 208 ----------PEQLVFKVPTADLEELAPQKADEDALQVSYDQIDDFLE 245 >gi|309701962|emb|CBJ01276.1| NH3-dependent NAD(+) synthetase [Escherichia coli ETEC H10407] Length = 275 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A ++ VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQS----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 L L P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ----LAAL--ACPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + + R +E+ +E+KRR Sbjct: 241 KNVPQQVARTIENWYLKTEHKRR 263 >gi|256840083|ref|ZP_05545592.1| N-carbamoylputrescine amidase [Parabacteroides sp. D13] gi|256739013|gb|EEU52338.1| N-carbamoylputrescine amidase [Parabacteroides sp. D13] Length = 291 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 21/232 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKS 75 D A NI K + EA R+G +L++ EL Y ED + +T + Sbjct: 13 DRAANIEKLKVNIREAAREGAELVVLQELHNGLYFCQTEDTSMFDLAETIPGPSTETFGA 72 Query: 76 DTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG- 132 + G +V+ + G+ N+ V+L+ IA + K+++P+ ++EK F G Sbjct: 73 LAKELGIVLVLSLFEKRAPGLYHNTAVVLEKDGTIAGKYRKMHIPDDPAYYEKFYFTPGD 132 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASPYYHNKLKKR 187 +PI RLG+L+C D W + + +GAE L +S K ++ Sbjct: 133 LGFEPINTSVGRLGVLVCWDQWY-PEAARLMAMRGAEMLIYPTAIGWESSDTQEEKDRQL 191 Query: 188 HEIVTGQISHV---HLPIIYVNQVG------GQDELI-FDGASFCFDGQQQL 229 VT Q H LP+I VN+ G GQ I F G SF Q +L Sbjct: 192 GAWVTIQRGHAVANGLPVISVNRTGHEPDPSGQTGGIRFWGNSFVAGPQGEL 243 >gi|240013985|ref|ZP_04720898.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae DGI18] gi|240016427|ref|ZP_04722967.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae FA6140] gi|240113084|ref|ZP_04727574.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae MS11] gi|240121552|ref|ZP_04734514.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID24-1] gi|240125877|ref|ZP_04738763.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae SK-92-679] Length = 263 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 14/171 (8%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLE 337 V L +Y + N ++G+SGGIDSA+ + +A + T++L P + P LE Sbjct: 11 VRWLDEYAAQANAKGFVVGVSGGIDSAVVSTLAA----RTGRTTLLLDMPIR-QHPGQLE 65 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 A + L +Y + + F Q + + + N +SR+R L Sbjct: 66 RARRHIRNLQGQYANVSAQTANLTDTFQTFEQTVGVHRTAFANQPLSLANARSRLRMLTL 125 Query: 392 MALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 126 YYYGQIHGLLVTGTGNKVEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 176 >gi|119357699|ref|YP_912343.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides DSM 266] gi|119355048|gb|ABL65919.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 296 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 24/258 (9%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVFKKSFIQACSSAIDTLKSD 76 N+A+A R A G +I ELF + Y E + + + A+ L + Sbjct: 22 NLAEADRLIRSAAAGGAQVICLQELFTTRYFCQIEDYEPFAYAEPVPGPTTQALQELARE 81 Query: 77 THDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYS 134 IV G+ N+ ++DA G+ + K+++P+ F+EK F G Sbjct: 82 LQ---VVIVASLFEARARGLYHNTAAVIDADGSYLGKYRKMHIPDDPGFYEKFYFTPGDL 138 Query: 135 NDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK------KR 187 + R +G+LIC D W + + +GAE +F A + +++ +R Sbjct: 139 GYKVFKTRYATIGVLICWDQW-YPEAARLVALRGAEIIFYPTAIGWAASEISDEVRRAQR 197 Query: 188 HEIVTGQISHVHLPIIYV---NQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 T Q+SH ++V N+VG + EL F G SF D Q+ + H +E + Sbjct: 198 TAWKTMQLSHAVANGVFVAAANRVGTEGELEFWGNSFVSDPFGQVIAEAPHQNEAVLLAR 257 Query: 245 WHYDQ---QLSQWNYMSD 259 + S W ++ D Sbjct: 258 CDLGRIGYYRSHWPFLRD 275 >gi|86144504|ref|ZP_01062836.1| NAD(+) synthetase [Vibrio sp. MED222] gi|85837403|gb|EAQ55515.1| NAD(+) synthetase [Vibrio sp. MED222] Length = 276 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 42/236 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIA---VDAL----GKENVQ--TIMLPYKYTSP 333 ++ +Q++ +I+G+SGG+DS C +A VD+L G + Q + LPY Sbjct: 28 IKTKLQQSGCKSLILGISGGVDSTTCGRLAQMTVDSLNESAGSDEYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENI 382 Q ED A A ++ K V +H +H + L + + I V N+ Sbjct: 85 QKDEDEAQLALSFIQPSQSVSVNIKAGVDGLH-AASHVALEGTGLLPTDSAKIDFVKGNV 143 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R R ++ + +++ T + +E G+ T +GD + PL L K QV +LA+ Sbjct: 144 KARARMIAQYEIAGYVGGLVIGTDHSAENITGFYTKHGDGACDLAPLFGLNKRQVRELAA 203 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + P +++K P+A EL P + D+ +L Y +DD ++ Sbjct: 204 TLGA--------------PEQLVKKVPTADLEELDPQKADEAALNLSYDQIDDFLE 245 >gi|42783148|ref|NP_980395.1| carbon-nitrogen family hydrolase [Bacillus cereus ATCC 10987] gi|42739076|gb|AAS43003.1| hydrolase, carbon-nitrogen family [Bacillus cereus ATCC 10987] Length = 259 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVHEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNRTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|81429182|ref|YP_396183.1| NAD synthetase [Lactobacillus sakei subsp. sakei 23K] gi|123563813|sp|Q38VA7|NADE_LACSS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|78610825|emb|CAI55876.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 275 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 38/243 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 ++ Y++KN F K ++G+SGG DS L A+ A+ G E+ Q I + Y Sbjct: 31 MKAYLKKNTFLKSYVLGISGGQDSTLVGALTEKAMQEMRAETGDESYQFIAVRLPYGEQA 90 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGN 389 DA A + + V ++ + M Q L E +G+ NI++R+R Sbjct: 91 DESDAMAAIEFMAAD-QVKRVN--IKGSVDAMVQSLAE--TGVTVSDFNKGNIKARVRMI 145 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 ++ + +L T + +E G+ T +GD P+ L K R + Sbjct: 146 AQYGIAGENSGAVLGTDHSAESITGFYTKFGDGGADLVPIFRLNK---------RQGKAM 196 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESF 503 + LG P + EK P+A+L RP D+ +L Y +DD + +++ E + Sbjct: 197 LAELGA-----PKHLYEKVPTADLEEDRPALPDELALGVTYDQIDDYLEGRQVSEEAATK 251 Query: 504 INN 506 I N Sbjct: 252 IEN 254 >gi|33865959|ref|NP_897518.1| nitrilase [Synechococcus sp. WH 8102] gi|33638934|emb|CAE07940.1| probable nitrilase [Synechococcus sp. WH 8102] Length = 338 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 20/172 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV--- 57 M+ +K+A AQ+ PV+ + G++ K A EA +G++LI+F E F+ YP V Sbjct: 1 MVTTVKVAAAQIRPVLFSLDGSLQKVLDAMAEAAAEGVELIVFPETFLPYYPYFSFVEPP 60 Query: 58 --FKKSFIQACSSAI-------DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNI 108 +S + A+ D + + G +++G +D + N+ ++ ++ Sbjct: 61 VRMGRSHLALYDQAVVVPGPVTDAVAAAARQHGMQVLLGVNERDGGTLYNTQLLFNSCGE 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDI-RLGILICEDIWKNSN 158 IA++ + P Y HE+ + G S +V + R+G L C W++ N Sbjct: 121 IALKRRKITPTY---HERMVWGQGDGSGLSVVSTPLGRVGALAC---WEHYN 166 >gi|116621495|ref|YP_823651.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Candidatus Solibacter usitatus Ellin6076] gi|116224657|gb|ABJ83366.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Candidatus Solibacter usitatus Ellin6076] Length = 263 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 36/194 (18%) Query: 2 LKKLKIAIAQLN-PVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-------PP 53 + +IA+A + P D ++A A +A +A+R+G +I F E F+ GY PP Sbjct: 1 MNTFRIALANIRFPATPD--ESVALAEQAIAQASREGAGIICFPECFVPGYRGMGKAVPP 58 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVR 112 D F + A ++A +V+G R + + +++D G I + Sbjct: 59 PDSAFLERAWSAIAAAAGKGAIA-------VVLGTERVVNGALFATALVIDRDGTIAGFQ 111 Query: 113 DKINL-PN----YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 DK+ + P+ YS +R F +G P+ F G+ IC + W+ + ++G Sbjct: 112 DKVQVDPSEDGLYSPGSGRRVFQTG----PLTF-----GVAICHEGWRYPETVRAAVRRG 162 Query: 168 AEFLFSLNASPYYH 181 A+ +F P++H Sbjct: 163 AQIVF----HPHFH 172 >gi|332185404|ref|ZP_08387152.1| N-carbamoylputrescine amidase [Sphingomonas sp. S17] gi|332014382|gb|EGI56439.1| N-carbamoylputrescine amidase [Sphingomonas sp. S17] Length = 282 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 18/236 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 + ++ +A QL DI NIA+ R EA +G +IL ELF Y ++ +F Sbjct: 1 MTQITVAALQLA-FTADIDRNIAEVSRLVREAAARGAQVILPPELFEGEYFCRVEDEGLF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + A A+ +++ + I F D NS+ +++ G + V K ++ Sbjct: 60 SNAKPTAEHKAVLAMQALASELKVHIPTSFFEADGPHHYNSLAMINPDGQVAGVYRKSHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 P+ + EK F G N D +LG+ IC D W + + GAE LF Sbjct: 120 PDGPGYEEKFYFRPG--NTGFKVWDGPATKLGVGICWDQWY-PETARAMMLMGAEILFYP 176 Query: 173 -SLNASPY---YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++ + P+ R ++ +S+V +PI+ N+VG + F G SF D Sbjct: 177 TAIGSEPHDDSLDTARLWRRAMLGHAVSNV-VPIVAANRVGCEHGQTFYGTSFICD 231 >gi|229592972|ref|YP_002875091.1| putative hydrolase [Pseudomonas fluorescens SBW25] gi|229364838|emb|CAY52879.1| putative hydrolase [Pseudomonas fluorescens SBW25] Length = 264 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 35/231 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ D+AGN+ + + EA+ D+++ E+F+SGY + Sbjct: 1 MRVALYQCPPLPLDVAGNLKRLHQLAHEASD--ADVLVLPEMFLSGYN-----IGAEAVG 53 Query: 65 ACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLP 118 A + A D + G I+ G+P + ++G + N+V ++DA L Sbjct: 54 ALAEAQDGPSAQAIGELAKSAGLAILYGYPERAEDGQIYNAVQLIDA-------HGQRLC 106 Query: 119 NYSEFH-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 NY + H + F +G + P+V +LG LIC D+ N + L GAE + Sbjct: 107 NYRKTHLFGDLDHSMFSAGDDDFPLVELNGWKLGFLICYDLEFPENT-RRLALAGAELIL 165 Query: 173 --SLNASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + N P+ + + R Q + Y N G + E+ + G S Sbjct: 166 VPTANMVPFDFVADVTVRARAFENQCY-----VAYANYCGHEGEIQYCGQS 211 >gi|229552653|ref|ZP_04441378.1| NAD(+) synthase [Lactobacillus rhamnosus LMS2-1] gi|258540031|ref|YP_003174530.1| NAD synthetase [Lactobacillus rhamnosus Lc 705] gi|229313982|gb|EEN79955.1| NAD(+) synthase [Lactobacillus rhamnosus LMS2-1] gi|257151707|emb|CAR90679.1| NH(3)-dependent NAD( ) synthetase [Lactobacillus rhamnosus Lc 705] Length = 275 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 37/233 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P + E + V L+ Y++KN F K ++G+SGG DS L + A+ + +T Sbjct: 16 PTIDPEKEIRRSVDFLKAYLKKNTFLKTYVLGISGGQDSTLAGTLTEKAMQEMRAETGDD 75 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + LPY + ++A A A + DV+ ++ +++S E Sbjct: 76 TYQFVAVRLPYG----EQADEADAMAAIEFMQADVVKRVNIKPSVDAMVSAV--EANGAA 129 Query: 378 VAE----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 +++ NI++R+R A++ + ++ T + +E G+ T +GD PL L Sbjct: 130 ISDFNKGNIKARMRMIAQYAIAGNMAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLD 189 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 K R + LG P + +K+P+A+L RP D+ +L Sbjct: 190 K---------RQGAALLKTLGA-----PAHLYQKAPTADLEDNRPALPDEVAL 228 >gi|324327940|gb|ADY23200.1| hydrolase, carbon-nitrogen family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 259 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNRTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|229011329|ref|ZP_04168521.1| NH(3)-dependent NAD(+) synthetase [Bacillus mycoides DSM 2048] gi|229166900|ref|ZP_04294647.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH621] gi|228616528|gb|EEK73606.1| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH621] gi|228749985|gb|EEL99818.1| NH(3)-dependent NAD(+) synthetase [Bacillus mycoides DSM 2048] Length = 272 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQS 335 L+ Y++ ++G+SGG DS L +A A+ G ++ LPYK + Sbjct: 30 LKAYLKTTGAKGFVLGISGGQDSTLAGRLAQLAVEEVRNEGGNATFISVRLPYKVQKDE- 88 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 +DA + + V I V+ F + L E + N+++RIR A+ Sbjct: 89 -DDAQLALQFIQADQSVAFDIASTVDSFSNQYENLLGESLTDFNKGNVKARIRMVTQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T + +E G+ T +GD PL L K R + LG Sbjct: 148 GGQQGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTK---------RQGRDLLQELG 198 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + K P+A+L +P Q D+ L Y LDD ++ Sbjct: 199 A-----DERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLE 237 >gi|281420759|ref|ZP_06251758.1| para-aminobenzoate synthase, component I [Prevotella copri DSM 18205] gi|281405051|gb|EFB35731.1| para-aminobenzoate synthase, component I [Prevotella copri DSM 18205] Length = 291 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 25/278 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 + + + QL+ DIA N + + +G +LI+ EL S Y ED+ Sbjct: 1 MNVGLLQLHNT-ADIANNKQRLAEGIIDLAHRGAELIVLQELHNSLYFCQVEDVDLFDLA 59 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNY 120 + D D G IV + G+ N+ V+++ G+I K+++P+ Sbjct: 60 EPIPGPSTDFYGKLAKDLGVVIVTSLFERRAPGLYHNTAVVMEKDGSIAGKYRKMHIPDD 119 Query: 121 SEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 ++EK F G PI +LG+L+C D W + + QG+E L A Y Sbjct: 120 PAYYEKFYFTPGDLGFHPIQTSVGKLGVLVCWDQWY-PEAARLMALQGSEMLIYPTAIGY 178 Query: 180 Y-----HNKLKKRHEIVTGQISHV---HLPIIYVNQVG------GQDELI-FDGASFCFD 224 + ++R T H LP+I VN+VG GQ E I F G+SF Sbjct: 179 ATYDTEEEQQRQREAWTTVMRGHAVANGLPVIAVNRVGFEPDPSGQTEGIQFWGSSFVAG 238 Query: 225 GQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSD 259 Q +L ++ E++ + + H + W ++ D Sbjct: 239 PQGELHYRASDQEEESLVVDIDLKHSENVRRWWPFLRD 276 >gi|163842108|ref|YP_001626513.1| carbon-nitrogen family hydrolase [Renibacterium salmoninarum ATCC 33209] gi|162955584|gb|ABY25099.1| hydrolase, carbon-nitrogen family [Renibacterium salmoninarum ATCC 33209] Length = 268 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 9/172 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTE--LFISGYPPEDLVFKKSF 62 +K+++ Q +PV GD+ GNI RR EA + G +LILF E +F G D F+ + Sbjct: 1 MKVSVGQFSPV-GDVDGNIEAMRRLAAEAAQDGSELILFPEEAMFTLGKVAGD--FRSAV 57 Query: 63 IQACSSAIDTLKSDTHDGGAGIVV-GFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 S + L + I+ G+ +E N++V + + G I+ K++L + Sbjct: 58 DAGWSVFVQQLTLIAAEHKIAIIAGGYESSGEERPFNTLVAVGSDGAILGTYRKLHLYDA 117 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 + E + + G S +V ++ +G++ C D+ + + + L +Q + + Sbjct: 118 FSYQESKRIMPGNSGLTVVRVGELNVGMMTCYDL-RFPELARALAEQDVDLI 168 >gi|312142691|ref|YP_003994137.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Halanaerobium sp. 'sapolanicus'] gi|311903342|gb|ADQ13783.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Halanaerobium sp. 'sapolanicus'] Length = 277 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 19/250 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +KLK+A+ QL +G++ N K A +G D++ EL +GY E L+ + Sbjct: 11 RKLKLALVQLKCELGNLKYNKDKILEHLGNAKAEGADIVCLPELATTGYNLE-LMGNDIY 69 Query: 63 IQACSSAIDTLK---SDTHDGGAGIVVGFPRQDQEG-VLNSVVILD-AGNIIAVRDKINL 117 + D LK + + I++ +++ G + N+ ++++ G II DK +L Sbjct: 70 DLSVGLDDDYLKYFCNFAKEQKINIILPLSLKEENGDIYNTALVINRQGEIIGRYDKAHL 129 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 HEKR + SG S ++ GI+IC D+ + + QGA+ LF +A Sbjct: 130 F----LHEKRFYNSGESYHIFELEGVKFGIIICYDL-GFPEAARKMALQGAKILFVPSAW 184 Query: 178 PYYH---NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 L R + +L + VN+VG +++L G S + Q+ Sbjct: 185 RIQDIGIWDLNTRQRALEN-----NLFLCGVNRVGSEEDLYLFGGSRVVNPHGQITASAS 239 Query: 235 HFSEQNFMTE 244 +E+ +TE Sbjct: 240 QGNEEVLITE 249 >gi|268682320|ref|ZP_06149182.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID332] gi|268622604|gb|EEZ55004.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID332] Length = 272 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 14/171 (8%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLE 337 V L +Y + N ++G+SGGIDSA+ + +A + T++L P + P LE Sbjct: 20 VRWLDEYAAQANAKGFVVGVSGGIDSAVVSTLAA----RTGRTTLLLDMPIR-QHPGQLE 74 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 A + L +Y + + F Q + + + N +SR+R L Sbjct: 75 RARRHIRNLQGQYANVSAQTANLTDTFQTFEQTVGVHQTAFANQPLSLANARSRLRMLTL 134 Query: 392 MALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 135 YYYGQIHGLLVTGTGNKVEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 185 >gi|49082818|gb|AAT50809.1| PA2074 [synthetic construct] Length = 271 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 17/160 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 + K+ +A Q+ P +G N+ A RA EA R+G ++++ EL SGY VF + Sbjct: 1 MAKVTVACCQIAPRIGAQEHNLRLAERAIREAARRGANVVVLPELAASGY-----VFADR 55 Query: 61 SFIQACSSAIDTLKSDTHDGGAG-----IVVGF-PRQDQEGVLNSVVILDAGNIIAVRDK 114 A + D AG IV GF R D + V NS ++DA + A+ K Sbjct: 56 GEALALAETRDGPSLGLWKALAGELDLVIVGGFCERLDPQRVANSAALVDADGVRAIYRK 115 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVF-RDIRLGILICEDI 153 +L N E F +G P+V R R+ +++C D+ Sbjct: 116 AHLWN----EESGIFEAGEQPPPVVATRFGRIAVMVCYDL 151 >gi|281491601|ref|YP_003353581.1| NH(3)-dependent NAD(+) synthetase [Lactococcus lactis subsp. lactis KF147] gi|281375319|gb|ADA64832.1| NH(3)-dependent NAD(+) synthetase [Lactococcus lactis subsp. lactis KF147] Length = 274 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 42/255 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ- 322 P+ + +A+ V L+DY++K F K ++G+SGG DS+L A IA++ + +E Sbjct: 15 PVIDPKAEIRVSVDFLKDYLKKYPFIKSFVLGISGGQDSSLAGRLAQIAIEEMRQETADE 74 Query: 323 -----TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSG 376 I LPY Q+ E+ A A A + P L VN ++ Q +G Sbjct: 75 TYKFVAIRLPY---GVQADEEDAQRALAF-----IQPDVSLTVNIKAAVEGQVAALNEAG 126 Query: 377 IVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 I NI++R R A++ + +L T + +E G+ T +GD PL Sbjct: 127 IEVSDFNKGNIKARQRMITQYAVAGQYQGAVLGTDHAAENITGFFTKFGDGGADLLPLFR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K R + + LG P+I EK P+A+L +P D+ +L Y Sbjct: 187 LNK---------RQGKALLAELGA-----DPAIYEKVPTADLEEGKPGLADEIALGVTYN 232 Query: 488 ILDDIIKRIVENEES 502 +DD + V +E++ Sbjct: 233 DIDDYTEGKVISEDA 247 >gi|302880656|ref|XP_003039265.1| hypothetical protein NECHADRAFT_98426 [Nectria haematococca mpVI 77-13-4] gi|256720079|gb|EEU33552.1| hypothetical protein NECHADRAFT_98426 [Nectria haematococca mpVI 77-13-4] Length = 348 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 17/155 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PE 54 M +++A+ Q+ PV D+A ++ KA +EA G LI F E ++ GYP P Sbjct: 1 MPASIRVAVTQVEPVYLDLAASVQKAVALIQEAAEHGAKLIAFPECWLPGYPAWIWARPV 60 Query: 55 DLVFKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNI 108 D + +I S +D LK + IV+GF Q + ++ ++ G + Sbjct: 61 DFDLQTRYIYNSLSLDSEVMDLLKVTAKEYSIAIVLGFSEQSRTYSIYISQAILSPQGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI 143 + R KI H +RT S+ V ++ Sbjct: 121 LMHRRKIK-----PTHMERTLFGDGSDASHVLNNV 150 >gi|15597270|ref|NP_250764.1| hypothetical protein PA2074 [Pseudomonas aeruginosa PAO1] gi|218891970|ref|YP_002440837.1| hypothetical protein PLES_32481 [Pseudomonas aeruginosa LESB58] gi|9948084|gb|AAG05462.1|AE004634_5 hypothetical protein PA2074 [Pseudomonas aeruginosa PAO1] gi|218772196|emb|CAW27975.1| hypothetical protein PLES_32481 [Pseudomonas aeruginosa LESB58] Length = 270 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 17/160 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 + K+ +A Q+ P +G N+ A RA EA R+G ++++ EL SGY VF + Sbjct: 1 MAKVTVACCQIAPRIGAQEHNLRLAERAIREAARRGANVVVLPELAASGY-----VFADR 55 Query: 61 SFIQACSSAIDTLKSDTHDGGAG-----IVVGF-PRQDQEGVLNSVVILDAGNIIAVRDK 114 A + D AG IV GF R D + V NS ++DA + A+ K Sbjct: 56 GEALALAETRDGPSLGLWKALAGELDLVIVGGFCERLDPQRVANSAALVDADGVRAIYRK 115 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVF-RDIRLGILICEDI 153 +L N E F +G P+V R R+ +++C D+ Sbjct: 116 AHLWN----EESGIFEAGEQPPPVVATRFGRIAVMVCYDL 151 >gi|260911376|ref|ZP_05917971.1| para-aminobenzoate synthase [Prevotella sp. oral taxon 472 str. F0295] gi|260634503|gb|EEX52598.1| para-aminobenzoate synthase [Prevotella sp. oral taxon 472 str. F0295] Length = 293 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 21/182 (11%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+++ G++ + K+++P+ ++EK F G PI RLG+L+C D W Sbjct: 97 NTAVVMEKDGSVAGIYRKMHIPDDPAYYEKFYFTPGDLGFQPIDTSVGRLGVLVCWDQWY 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GA+ L A Y + + ++R T Q +H LP++ VN+ Sbjct: 157 -PEAARLMAMRGADMLIYPTAIGYAASDDEAEQQRQREAWTTIQRAHAVANGLPVVAVNR 215 Query: 208 VGGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE---WHYDQQLSQWNYM 257 VG + + + F G+SF Q +L F+ EQ + + H +Q W + Sbjct: 216 VGFEPDPSQQTPGINFWGSSFVAGPQGELLFRANDTEEQCAIIDIDLAHSEQVRRWWPFF 275 Query: 258 SD 259 D Sbjct: 276 RD 277 >gi|332637977|ref|ZP_08416840.1| NAD synthetase [Weissella cibaria KACC 11862] Length = 274 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 120/281 (42%), Gaps = 54/281 (19%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 E ++ V L+DY++K +++G+SGG DS L ++ A + +T Sbjct: 21 ETEFRRSVELLKDYLKKTGMKTLVLGISGGQDSTLAGKMSQTAAEELRAETGDDSYKFVA 80 Query: 324 IMLPYKYTS-PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-- 380 + LPY + Q D+ A +A D ++ + + +Q + +GI Sbjct: 81 MRLPYNAQADEQDALDSIAWQQA-----DQTVRVNIEDAVVGMTNQLAE---AGIAISDF 132 Query: 381 ---NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 NI++R R ++ +++ T + +E G+ T +GD + PL L K Q Sbjct: 133 NKGNIKARERMIAQYGVAGAMHGVVVGTDHAAEALAGFYTKFGDGAADITPLYRLNKRQG 192 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII 493 Q+ ++ LG P + +K+P+A+L RP D+ +L Y +DD + Sbjct: 193 RQILAY---------LGA-----PEHLYQKTPTADLEEDRPALPDEVALGVSYDAIDDYL 238 Query: 494 KRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 + E+ I +E L +E+K RQ+PV Sbjct: 239 EGKDVAEKDAIQ------------IEKLFTMTEHK-RQSPV 266 >gi|311070964|ref|YP_003975887.1| NAD synthetase [Bacillus atrophaeus 1942] gi|310871481|gb|ADP34956.1| NAD synthetase [Bacillus atrophaeus 1942] Length = 272 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 32/226 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPYKYTSPQS 335 L++Y++K ++G+SGG DS L A +AV+++ +E + + LP+ Q Sbjct: 30 LKNYLKKTGAKGFVLGISGGQDSTLAGRLAQLAVESVREEGGEAEFIAVRLPH---GKQQ 86 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---AENIQSRIRGNILM 392 ED A A K D D+ + + Q+ ++ + N+++R R Sbjct: 87 DEDDAQLALQF-IKPDKSWSFDIQSTVSAFAEQYKKDTGDTLTDFNKGNVKARTRMIAQY 145 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A+ ++L T + +E G+ T YGD PL L K R + Sbjct: 146 AVGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTK---------RQGRSLLKE 196 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG + + K+P+A+L +P QTD+ L Y +DD ++ Sbjct: 197 LGAV-----ERLYLKAPTADLLDEKPQQTDETELGITYNDIDDYLE 237 >gi|300823204|ref|ZP_07103337.1| NAD+ synthetase [Escherichia coli MS 119-7] gi|300904597|ref|ZP_07122434.1| NAD+ synthetase [Escherichia coli MS 84-1] gi|301303969|ref|ZP_07210087.1| NAD+ synthetase [Escherichia coli MS 124-1] gi|331668428|ref|ZP_08369276.1| NAD+ synthetase [Escherichia coli TA271] gi|331677617|ref|ZP_08378292.1| NAD+ synthetase [Escherichia coli H591] gi|300403510|gb|EFJ87048.1| NAD+ synthetase [Escherichia coli MS 84-1] gi|300524358|gb|EFK45427.1| NAD+ synthetase [Escherichia coli MS 119-7] gi|300840766|gb|EFK68526.1| NAD+ synthetase [Escherichia coli MS 124-1] gi|315257454|gb|EFU37422.1| NAD+ synthetase [Escherichia coli MS 85-1] gi|331063622|gb|EGI35533.1| NAD+ synthetase [Escherichia coli TA271] gi|331074077|gb|EGI45397.1| NAD+ synthetase [Escherichia coli H591] Length = 275 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLRTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LTALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|294140516|ref|YP_003556494.1| NH(3)-dependent NAD(+) synthetase [Shewanella violacea DSS12] gi|293326985|dbj|BAJ01716.1| NH(3)-dependent NAD(+) synthetase [Shewanella violacea DSS12] Length = 276 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 44/233 (18%) Query: 287 VQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQTI------MLPYKYTSPQSLE 337 +++++ +++G+SGG+DS+L I+VD L E Q++ LPY Q E Sbjct: 32 LKESHCKSLVLGISGGVDSSLAGRLCQISVDELNHEAEQSVYQFIAVRLPYNV---QQDE 88 Query: 338 DAA--ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI----------VAENIQSR 385 D A AC K + IH+ V + L E +GI V N+++R Sbjct: 89 DEAQLACQFISPSKQVTVNIHEGVAGVHTHTLAGL--EAAGIELSDKNKVDFVKGNVKAR 146 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R ++ + +++ T + +E G+ T +GD + PL L K QV +LA++ Sbjct: 147 MRMIAQYEIAGLTGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRKLAAFLG 206 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + P ++ K+P+A+L +P D+ +L Y +DD ++ Sbjct: 207 A--------------PDVLVHKAPTADLEDDKPQLEDEVALGLTYDQIDDFLE 245 >gi|156063072|ref|XP_001597458.1| hypothetical protein SS1G_01652 [Sclerotinia sclerotiorum 1980] gi|154696988|gb|EDN96726.1| hypothetical protein SS1G_01652 [Sclerotinia sclerotiorum 1980 UF-70] Length = 321 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 20/162 (12%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K ++A+ Q P D+ ++ K R EA G L+ F E FI GYP P D V Sbjct: 8 KYRVAVTQHEPEWFDLQKSVEKTCRIITEAAENGARLVTFAEAFIPGYPAWIWTRPVDPV 67 Query: 58 FKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVR 112 ++I+ S + T+++ G + +GF D + + I+D G+I+ R Sbjct: 68 LSTAYIKNSLVVDSDEMKTIQNCAARHGIVVSLGFSENDNNSLYIAQAIIDGDGSIVMKR 127 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIV----FRDIRLGILIC 150 K+ H +RT S D ++ R ++G L C Sbjct: 128 RKLK-----ATHMERTVFGDASGDSLLNVASTRVGKVGTLAC 164 >gi|199597977|ref|ZP_03211401.1| NAD synthetase [Lactobacillus rhamnosus HN001] gi|258508853|ref|YP_003171604.1| NAD synthetase [Lactobacillus rhamnosus GG] gi|199591067|gb|EDY99149.1| NAD synthetase [Lactobacillus rhamnosus HN001] gi|257148780|emb|CAR87753.1| NH(3)-dependent NAD( ) synthetase [Lactobacillus rhamnosus GG] gi|259650155|dbj|BAI42317.1| NAD synthase [Lactobacillus rhamnosus GG] Length = 275 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 37/233 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P + E + + L+ Y++KN F K ++G+SGG DS L + A+ + +T Sbjct: 16 PTIDPEKEIRRSIDFLKAYLKKNTFLKTYVLGISGGQDSTLAGTLTEKAMQEMRAETGDD 75 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + LPY + ++A A A + DV+ ++ +++S E Sbjct: 76 TYQFVAVRLPYG----EQADEADAMAAIEFMQADVVKRVNIKPSVDAMVSAV--EANGAA 129 Query: 378 VAE----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 +++ NI++R+R A++ + ++ T + +E G+ T +GD PL L Sbjct: 130 ISDFNKGNIKARMRMIAQYAIAGNMAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLD 189 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 K R + LG P + +K+P+A+L RP D+ +L Sbjct: 190 K---------RQGAALLKALGA-----PAHLYQKAPTADLEDNRPALPDEVAL 228 >gi|61657428|emb|CAI44343.1| hypothetical protein [Thermotoga sp. RQ7] Length = 267 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 5/169 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A Q+ P +G N+++ EEA G+D+I+F EL ISGY ++ ++ Sbjct: 1 MRVAAVQMLPAIGGFEENLSRIEHFVEEAISSGVDVIVFPELTISGYTWDEKTLERGARF 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 L + +G IV G PR + NS+VI + DK +L Sbjct: 61 FEEVVRKKLLRLSREGQIVIVTGTPRIVLGKLRNSLVIFKKKRELLFYDKTHLFR----G 116 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 EK F G R + G LIC +I I + L +G++ + S Sbjct: 117 EKDVFEPGEYFLVFSHRGVIFGTLICYEI-GFPEISRILTLKGSKVILS 164 >gi|24373584|ref|NP_717627.1| NAD synthetase [Shewanella oneidensis MR-1] gi|46396441|sp|Q8EFF2|NADE_SHEON RecName: Full=NH(3)-dependent NAD(+) synthetase gi|24347909|gb|AAN55071.1|AE015644_6 NH(3)-dependent NAD(+) synthetase [Shewanella oneidensis MR-1] Length = 276 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 120/260 (46%), Gaps = 41/260 (15%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQ---- 322 E E + V ++ +++ +++G+SGG+DS+ LC +A+++L E+ + Sbjct: 16 EPEFEVQRRVAFIKTKLKEARSKALVLGISGGVDSSTAGRLCQ-LAINSLNSEHPEGGYQ 74 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF-SLMSQFLQE---EPSG 376 + LPY+ + E AC K + +H V+ + +S F+ P Sbjct: 75 FIAVRLPYQIQKDEH-EAQQACQFIQPSKLVTVNVHQGVDGVHQATLSAFIDAGLTTPDA 133 Query: 377 ----IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 + N+++R+R L+ +++ T + +E G+ T +GD + PL L Sbjct: 134 AKVDFIKGNVKARMRMIAQYELAGLVGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGL 193 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPI 488 K QV QLA++ + P S++ K+P+A+L +P D+ +L Y Sbjct: 194 NKRQVRQLAAYLGA--------------PESLVYKAPTADLEDNKPLLEDEVALGLTYEQ 239 Query: 489 LDDIIK-RIVEN--EESFIN 505 +DD ++ ++V+ EE IN Sbjct: 240 IDDFLEGKVVDKAVEEKLIN 259 >gi|323186920|gb|EFZ72238.1| NH(3)-dependent NAD(+) synthetase [Escherichia coli RN587/1] Length = 275 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y+Q F K +++GLSGG DS L + A+ + +T + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGLSGGQDSTLAGKLCQMAINELRQETDNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|330919620|ref|XP_003298689.1| hypothetical protein PTT_09473 [Pyrenophora teres f. teres 0-1] gi|311327994|gb|EFQ93215.1| hypothetical protein PTT_09473 [Pyrenophora teres f. teres 0-1] Length = 321 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 19/161 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 +++A+AQ P D+ + K R EA + G L+ F+E +I GYP P D Sbjct: 9 VRVAVAQFEPAWLDLPKAVEKTCRLVREAAQNGAKLVSFSECWIPGYPAWIWTRPVDFEL 68 Query: 59 KKSFI----QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRD 113 ++I Q S + + + +V+GF ++ + S I++A G I +R Sbjct: 69 STAYIRNSLQVDSDEMRRICQSAAEHNIAVVLGFSENYKDSLYISQAIINAKGEIAVLRR 128 Query: 114 KINLPNYSEFHEKRTFISGYSND---PIVFRDI-RLGILIC 150 K+ + E+ F GY + + DI R+G L C Sbjct: 129 KLKATHM----ERTVFGDGYDSSLHTVVELPDIGRVGALAC 165 >gi|254581832|ref|XP_002496901.1| ZYRO0D10714p [Zygosaccharomyces rouxii] gi|238939793|emb|CAR27968.1| ZYRO0D10714p [Zygosaccharomyces rouxii] Length = 714 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 122/601 (20%), Positives = 213/601 (35%), Gaps = 135/601 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN D GN + + + A +G L + EL I+GY D + Sbjct: 1 MSNLITLATCNLNQWALDFEGNRDRILESIKIAKEKGARLRVGPELEITGYGCLDHFLEN 60 Query: 61 SF-IQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 + + + K +TH G + +G P + N ++ G I+ +R KI L Sbjct: 61 DVNLHSWEMYAQIIRKPETH--GILLDIGMPVMHKNVRYNCRLLSLDGQILFIRPKIWLA 118 Query: 119 NYSEFHEKRTF--------ISGYSNDPIVFR-----------------DIRLGILICEDI 153 N + E R F + + P++ + D +G CE++ Sbjct: 119 NDGNYREMRFFTPWMKTGVVEEFFLPPVIQKVTEQQSVPFGDAVIHTLDTCIGTETCEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-D 212 + + + G E + + + S + KL KR +++ S +Y NQ G D Sbjct: 179 FTPQSPHIAMSLDGVEIITNSSGSHHELRKLNKRLDLIASATSRCGGVYLYANQRGCDGD 238 Query: 213 ELIFDGASF------------------------CFDGQQQLAFQMKHFSE--QNFMTEW- 245 L +DG + D ++ +++ S Q +TE Sbjct: 239 RLYYDGCALIAVNGKVVAQGSQFSLKDVEVVTATVDLEEVRSYRASVMSRGLQASLTETK 298 Query: 246 ----HYDQQLSQWNYMSDDSASTM-------YIPLQEEEADYNACVLSLRDYVQKNNFHK 294 H +L+ D + +IP +EE A AC L DYV++ N Sbjct: 299 FKRIHVPVELAPLALRFDMKIAPTKTREPFYHIP-EEEIALGPAC--WLWDYVRRCNGSG 355 Query: 295 VIIGLSGGIDSALCAAIAVDAL---------GKENV------------------------ 321 + LSGGIDS A I G E V Sbjct: 356 FFLALSGGIDSCATATITYSMCRIVFQEIQEGNEQVLKDARKVARAAEDWIPSSPEEICN 415 Query: 322 ---QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---- 374 T + + +S ++ +A +K +G + L + +V+ S+ ++P Sbjct: 416 KILHTSFMGTENSSKETQSRSAELSKRIGSYHVDLKMDKIVSSVVSIFEVATGKKPIFKI 475 Query: 375 ------SGIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTL 418 + +NIQ+R+R + + N ++L ++N E GY T Sbjct: 476 FGGSQIENLALQNIQARLRMVLAYLFAQLLPWVRGTPNTGGLLVLGSANVDECLRGYLTK 535 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 Y S NP+ + KT + + ++ + P+ E L +P+AEL P Sbjct: 536 YDCSSADINPIGGISKTDLKRFIAYATKNFDM----PILE----DFLNATPTAELEPITK 587 Query: 479 D 479 D Sbjct: 588 D 588 >gi|254493885|ref|ZP_05107056.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae 1291] gi|268684477|ref|ZP_06151339.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae SK-92-679] gi|226512925|gb|EEH62270.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae 1291] gi|268624761|gb|EEZ57161.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae SK-92-679] Length = 272 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PY 328 + +A V L +Y + N ++G+SGGIDSA+ + +A + T++L P Sbjct: 11 DTQAVITHIVRWLDEYAAQANAKGFVVGVSGGIDSAVVSTLAA----RTGRTTLLLDMPI 66 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NI 382 + P LE A + L +Y + + F Q + + + N Sbjct: 67 R-QHPGQLERARRHIRNLQGQYANVSAQTANLTDTFQTFEQTVGVHRTAFANQPLSLANA 125 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +SR+R L ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 126 RSRLRMLTLYYYGQIHGLLVTGTGNKVEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 185 >gi|107015899|gb|ABF83489.1| putative nitrilase [Gibberella moniliformis] Length = 320 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 17/170 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------- 52 M K LK+A Q PV D+ G + K+ +EA ++G ++I + E+FI GYP Sbjct: 1 MSKSLKVAAIQAEPVWNDLQGGVNKSIGLIQEAAKEGANVIGYPEVFIPGYPWSIWANSP 60 Query: 53 ----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGN 107 P + K+ ++ S +D +++ + G +V+G+ + + + + +D G Sbjct: 61 TENAPWINEYFKNSMEKESPEMDQIRAAVREAGVFVVLGYSERYRGTLYIAQSFIDETGT 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS 157 I+ R KI P + E+ + G D + G + + W+++ Sbjct: 121 IVLHRRKIK-PTHV---ERAIYGDGQGESLTNVADTKFGRVAGLNCWEHT 166 >gi|59801081|ref|YP_207793.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae FA 1090] gi|268594944|ref|ZP_06129111.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae 35/02] gi|268596677|ref|ZP_06130844.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae FA19] gi|268601517|ref|ZP_06135684.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID18] gi|268603854|ref|ZP_06138021.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID1] gi|268686786|ref|ZP_06153648.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae SK-93-1035] gi|291043638|ref|ZP_06569354.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae DGI2] gi|293398943|ref|ZP_06643108.1| NAD+ synthetase [Neisseria gonorrhoeae F62] gi|59717976|gb|AAW89381.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae FA 1090] gi|268548333|gb|EEZ43751.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae 35/02] gi|268550465|gb|EEZ45484.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae FA19] gi|268585648|gb|EEZ50324.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID18] gi|268587985|gb|EEZ52661.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae PID1] gi|268627070|gb|EEZ59470.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae SK-93-1035] gi|291012101|gb|EFE04090.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae DGI2] gi|291610357|gb|EFF39467.1| NAD+ synthetase [Neisseria gonorrhoeae F62] gi|317164398|gb|ADV07939.1| putative NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 273 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PY 328 + +A V L +Y + N ++G+SGGIDSA+ + +A + T++L P Sbjct: 12 DTQAVITHIVRWLDEYAAQANAKGFVVGVSGGIDSAVVSTLAA----RTGRTTLLLDMPI 67 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NI 382 + P LE A + L +Y + + F Q + + + N Sbjct: 68 R-QHPGQLERARRHIRNLQGQYANVSAQTANLTDTFQTFEQTVGVHQTAFANQPLSLANA 126 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +SR+R L ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 127 RSRLRMLTLYYYGQIHGLLVTGTGNKVEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|167834957|ref|ZP_02461840.1| hydrolase, carbon-nitrogen family protein [Burkholderia thailandensis MSMB43] Length = 287 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 28/240 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 ++K +A Q+ ++ N+A+A R +A +G ++L ELF + Y P L Sbjct: 1 MRKTIVAATQM-ACDWNVDANLARAERLVRDAAARGAQIVLLQELFETPYFCIDQNPAHL 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 + + + S + G + V F + + NSV + DA G + V K Sbjct: 60 ALAQPY--EGHRWLARFASLARELGVVLPVSFFERAGQTQFNSVAVFDADGRALGVYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSNICKHLKKQGAEF 170 ++P+ + EK F G + FR R+G+ IC D W + + GAE Sbjct: 118 HIPDGPGYTEKYYFTPGDTG----FRVWDTAYGRIGVGICWDQW-FPECARTMALAGAEL 172 Query: 171 LF---SLNASPYYHNKLKKRHEIVT--GQISHVHLPIIYVNQV----GGQDELIFDGASF 221 L ++ + P+ + + H T G + +P++ N++ G E+ F G+SF Sbjct: 173 LLYPTAIGSEPHDASIDSRAHWQNTQRGHAAANLMPVVASNRIGVERGASGEIAFYGSSF 232 >gi|314936036|ref|ZP_07843385.1| NAD+ synthetase [Staphylococcus hominis subsp. hominis C80] gi|313655853|gb|EFS19596.1| NAD+ synthetase [Staphylococcus hominis subsp. hominis C80] Length = 278 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 34/240 (14%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPY-KYTSP 333 +++YVQ + F +++G+SGG DS L A +AV+ L KE + + LPY K Sbjct: 31 IKNYVQSHTFIESLVLGISGGQDSTLTGKLAQLAVEELRKEGRECQFIAVKLPYGKQKDA 90 Query: 334 QSLEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 +EDA + ++ P D SL + E + N ++R R + Sbjct: 91 DEVEDALHFIQPDEVITVNIKPAVD--QSVASLKEAGI--ELTDFQRGNEKARERMKVQF 146 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 +++++ +++ T + +E G+ T YGD + P+ L K Q QL + + Sbjct: 147 SIASNRSGIVIGTDHSAENITGFYTKYGDGAADIAPIFGLDKRQGRQLLEYLEA------ 200 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESFINN 506 P + EK P+A+L +P D+E+L Y +DD + K + + ++ I N Sbjct: 201 --------PTHLYEKVPTADLEDDKPQLPDEEALGVTYNQIDDYLEGKEVPSDAKTTIEN 252 >gi|312883114|ref|ZP_07742845.1| NAD synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369274|gb|EFP96795.1| NAD synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 275 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKEN------VQTIMLPYKYTSPQSLEDAAACAK---- 344 +++G+SGG+DS C +A A+ + N Q I + Y + E+A K Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVNELNESADSEYQFIAVRLPYGEQKDEEEAQIALKFIQP 99 Query: 345 ----ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMALSNHS 398 ++ K V +H N + LQ + S I V N+++R R ++ + Sbjct: 100 THSISVNIKDGVDGLHRASNDALE-ANGLLQIDKSKIDFVKGNVKARSRMIAQYEIAGYV 158 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 ++L T + +E G+ T +GD + PL L K QV Q+AS + Sbjct: 159 GGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRQVASELGA------------ 206 Query: 459 VIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+++L Y +DD ++ Sbjct: 207 --PDLLVNKTPTADLEELVPQKADEDALSVTYDQIDDFLE 244 >gi|331653141|ref|ZP_08354146.1| NAD+ synthetase [Escherichia coli M718] gi|331049239|gb|EGI21311.1| NAD+ synthetase [Escherichia coli M718] gi|332090669|gb|EGI95764.1| NH(3)-dependent NAD(+) synthetase [Shigella boydii 5216-82] Length = 275 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLRTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|85059844|ref|YP_455546.1| NAD synthetase [Sodalis glossinidius str. 'morsitans'] gi|123518992|sp|Q2NRT4|NADE_SODGM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|84780364|dbj|BAE75141.1| NH3-dependent NAD synthase [Sodalis glossinidius str. 'morsitans'] Length = 274 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 47/259 (18%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P + A++ V L+ Y++K+ F +++G+SGG DS L I A+ + +T + Sbjct: 15 PTIDPAAEFRVSVEFLKAYLKKHIFVRTLVLGISGGQDSTLTGKICQQAISELRQETGIA 74 Query: 327 PYKYTSPQ----SLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIV 378 Y++ + + +D A C A+ + + I + + +S+ +GIV Sbjct: 75 DYQFIAVRLPHGEQKDEADCKDAIAFIEPDRVITINIKSAIQASEATLSE------AGIV 128 Query: 379 AE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 N ++R R +++ + +++ T + +E G+ T YGD NPL L Sbjct: 129 LSDYVKGNEKARERMKAQYSIAGMTAGLVVGTDHAAEAVTGFFTKYGDGGTDINPLFRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPIL 489 K R + LG P + K+P+A+L P D+ +L Y +L Sbjct: 189 K---------RQGRALLQHLG-----CPEHLYLKAPTADLEEESPALPDETALGVTYEML 234 Query: 490 DDIIK---------RIVEN 499 DD ++ R++EN Sbjct: 235 DDYLEGKTIDAAAARVIEN 253 >gi|268599171|ref|ZP_06133338.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae MS11] gi|268583302|gb|EEZ47978.1| NH(3)-dependent NAD synthetase [Neisseria gonorrhoeae MS11] Length = 273 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PY 328 + +A V L +Y + N ++G+SGGIDSA+ + +A + T++L P Sbjct: 12 DTQAVITHIVRWLDEYAAQANAKGFVVGVSGGIDSAVVSTLAA----RTGRTTLLLDMPI 67 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NI 382 + P LE A + L +Y + + F Q + + + N Sbjct: 68 R-QHPGQLERARRHIRNLQGQYANVSAQTANLTDTFQTFEQTVGVHRTAFANQPLSLANA 126 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +SR+R L ++ T NK E VG+ T YGD +P+ DL KTQV++LA Sbjct: 127 RSRLRMLTLYYYGQIHGLLVTGTGNKVEDFGVGFFTKYGDGGVDISPIADLTKTQVYRLA 186 >gi|30264111|ref|NP_846488.1| carbon-nitrogen family hydrolase [Bacillus anthracis str. Ames] gi|47529546|ref|YP_020895.1| carbon-nitrogen family hydrolase [Bacillus anthracis str. 'Ames Ancestor'] gi|49186942|ref|YP_030194.1| carbon-nitrogen family hydrolase [Bacillus anthracis str. Sterne] gi|65321426|ref|ZP_00394385.1| COG0388: Predicted amidohydrolase [Bacillus anthracis str. A2012] gi|165871109|ref|ZP_02215759.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0488] gi|167639492|ref|ZP_02397763.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0193] gi|170687185|ref|ZP_02878403.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0465] gi|170705818|ref|ZP_02896281.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0389] gi|177652631|ref|ZP_02935047.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0174] gi|190566193|ref|ZP_03019112.1| hydrolase, carbon-nitrogen family [Bacillus anthracis Tsiankovskii-I] gi|227816812|ref|YP_002816821.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. CDC 684] gi|229601695|ref|YP_002868336.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0248] gi|254683802|ref|ZP_05147662.1| hydrolase, carbon-nitrogen family protein [Bacillus anthracis str. CNEVA-9066] gi|254721638|ref|ZP_05183427.1| hydrolase, carbon-nitrogen family protein [Bacillus anthracis str. A1055] gi|254736148|ref|ZP_05193854.1| hydrolase, carbon-nitrogen family protein [Bacillus anthracis str. Western North America USA6153] gi|254754183|ref|ZP_05206218.1| hydrolase, carbon-nitrogen family protein [Bacillus anthracis str. Vollum] gi|254758127|ref|ZP_05210154.1| hydrolase, carbon-nitrogen family protein [Bacillus anthracis str. Australia 94] gi|30258756|gb|AAP27974.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. Ames] gi|47504694|gb|AAT33370.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. 'Ames Ancestor'] gi|49180869|gb|AAT56245.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. Sterne] gi|164713028|gb|EDR18555.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0488] gi|167512551|gb|EDR87926.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0193] gi|170129358|gb|EDS98222.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0389] gi|170668802|gb|EDT19547.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0465] gi|172081966|gb|EDT67034.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0174] gi|190563112|gb|EDV17078.1| hydrolase, carbon-nitrogen family [Bacillus anthracis Tsiankovskii-I] gi|227005657|gb|ACP15400.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. CDC 684] gi|229266103|gb|ACQ47740.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0248] Length = 259 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIFFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|327305569|ref|XP_003237476.1| hypothetical protein TERG_02197 [Trichophyton rubrum CBS 118892] gi|326460474|gb|EGD85927.1| hypothetical protein TERG_02197 [Trichophyton rubrum CBS 118892] Length = 335 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 16/154 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 LK+AI Q P D+AG++ K EA + L+ F E +I GYP P D + Sbjct: 6 LKVAITQAQPKWLDLAGSVEKTVNLIAEAAKGDAKLVAFPECWIPGYPAWIWQRPVDPII 65 Query: 59 KKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGV-LNSVVILDAGNIIAVR 112 +IQ S+ ++T+KS + +V+GF D V + +I G ++ R Sbjct: 66 NTKYIQNSLSVNSAEMNTIKSAAKESNIAVVLGFVEAIDTHSVYIAQAIISPKGELLMHR 125 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLG 146 KI P + E+ F G +D D+ G Sbjct: 126 RKIK-PTH---MERTVFGDGSGSDLTNVADVDFG 155 >gi|229098505|ref|ZP_04229446.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock3-29] gi|229117531|ref|ZP_04246903.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock1-3] gi|228665851|gb|EEL21321.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock1-3] gi|228684827|gb|EEL38764.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock3-29] Length = 280 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 13/181 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K+K+A Q++ V GD+ N+ A+ EA ++ D+I+ EL+ +GY DL Sbjct: 20 EKMKVACIQMDIVFGDVEKNMENAKNKISEAMKERPDVIVLPELWTTGY---DLTRLSEI 76 Query: 63 IQACSSAIDT---LKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINL 117 A ++T LK + G IV G +Q ++GV N++ V+ + G+++ K++L Sbjct: 77 --ADRDGLETKERLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNNEGDLVNEYSKVHL 134 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + E + ++G DI IC DI + H K GA+ F + Sbjct: 135 --FQLMDEHKYLMAGNKTGEFKLDDIECAGTICYDIRFPEWMRVHTAK-GAKVFFVVAEW 191 Query: 178 P 178 P Sbjct: 192 P 192 >gi|154251595|ref|YP_001412419.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Parvibaculum lavamentivorans DS-1] gi|154155545|gb|ABS62762.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Parvibaculum lavamentivorans DS-1] Length = 290 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 16/218 (7%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKKSFIQACSSAIDTLKSDT 77 NIA+A A +G +IL ELF + Y DL+ + I A + A+ ++ Sbjct: 20 NIARAETLVRAAAEKGAQVILLQELFETPYFCKDTEPDLMHLATPI-ADNPAVHHFRALA 78 Query: 78 HDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDP 137 A I V + NS+V++D+G I+ V K ++P+ + EK F G + Sbjct: 79 AHYKAVIPVSIYERANNAQYNSLVMIDSGEILGVYRKSHIPDGPGYREKYYFSPGDTGFY 138 Query: 138 IV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRH--EIV 191 + R R+G IC D W + L +GA+ + ++ + P+ + H + Sbjct: 139 VWNTRHGRIGAAICWDQW-FPETARILALKGADVILYPTAIGSEPHDETIHSRDHWQRTM 197 Query: 192 TGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFDG 225 G + P++ N+VG ++ + F G+SF D Sbjct: 198 QGHSAANLTPVVASNRVGREEGRSCAITFYGSSFITDA 235 >gi|320181229|gb|EFW56148.1| NAD synthetase [Shigella boydii ATCC 9905] Length = 275 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLRTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNVPEQVARTIENWYLKTEHKRR 263 >gi|154293009|ref|XP_001547063.1| hypothetical protein BC1G_14773 [Botryotinia fuckeliana B05.10] gi|150845677|gb|EDN20870.1| hypothetical protein BC1G_14773 [Botryotinia fuckeliana B05.10] Length = 327 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 20/162 (12%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K ++A+ Q P D+ ++ K R EA G L+ F E FI GYP P D + Sbjct: 8 KYRVAVTQHEPEWFDLQKSVEKTCRIITEAAENGAQLVTFAEAFIPGYPAWIWTRPVDPI 67 Query: 58 FKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVR 112 ++I+ S + T+++ G + +GF D + + I+D G I+ R Sbjct: 68 LSTTYIKNSLVVDSDEMRTIQNCAAKYGIVVSLGFSENDNNSLYIAQAIIDGDGTIVMKR 127 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIV----FRDIRLGILIC 150 K+ H +RT S D ++ R ++G L C Sbjct: 128 RKLKAT-----HMERTIFGDSSGDSLMNVASTRVGKVGTLAC 164 >gi|149178474|ref|ZP_01857063.1| NAD synthetase [Planctomyces maris DSM 8797] gi|148842687|gb|EDL57061.1| NAD synthetase [Planctomyces maris DSM 8797] Length = 327 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 50/236 (21%) Query: 274 ADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 A+ V +++ V+K K ++GLSGGIDS++ A+ V A G + V IM+P T Sbjct: 19 AETERIVSWMQETVRKTMRKKGAVLGLSGGIDSSVVTALCVRAFGADRVLGIMMPEHDTK 78 Query: 333 PQSL----------------EDAAACAKALGC--KYDVL---PIHDLVNHFFS--LMSQF 369 +SL E+ + + GC + DV I + H+ S ++ Sbjct: 79 DESLTFGQLLADHFNVEAIVENISPMLQGAGCYERRDVAIKQVIPEYEPHWKSKIVLPNL 138 Query: 370 LQE-----------EPSG---------------IVAENIQSRIRGNILMALSNHSKAMLL 403 L+E P G + A N + R R + ++ + Sbjct: 139 LKEGGYRVFSVVVQTPEGEFIKKRLPLSAYQTIVAATNFKQRCRKMMEYYHADRLNYAVP 198 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 T N+ E G+ GD + P+ LYK+QV+QLA + + + P T+ Sbjct: 199 GTPNRLEYDQGFFVKNGDGAADLKPIAHLYKSQVYQLAEYLDVPEVIRMRPPTTDT 254 >gi|40890299|gb|AAR97494.1| nitrilase [uncultured organism] Length = 381 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 30/187 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV------- 57 K A Q PV D I KA R EEA G + F E+FI GYP + Sbjct: 8 FKAATVQAEPVWMDADATITKAIRIIEEAADNGAKFVAFPEVFIPGYPWWIWLGTAMWGA 67 Query: 58 -----FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAV 111 F ++ ++ + +++ G +V+G+ +D ++ V I D+G I+A Sbjct: 68 KFVVPFHENCLELGDKRMQRIQAAAKQNGIALVMGYGERDGGSRYMSQVFIDDSGKIVAN 127 Query: 112 RDKINLPNYSEFHEKRT-FISGYSNDPIV--FRDIRLGILICEDIWKNSNICKHLKKQGA 168 R K+ HE+RT F G +D I F R+G C W +HL+ Sbjct: 128 RRKLK-----PTHEERTIFGEGNGSDFITHDFPFARVGGFNC---W------EHLQPLSK 173 Query: 169 EFLFSLN 175 ++SL Sbjct: 174 YMMYSLQ 180 >gi|83859244|ref|ZP_00952765.1| hydrolase, carbon-nitrogen family protein [Oceanicaulis alexandrii HTCC2633] gi|83852691|gb|EAP90544.1| hydrolase, carbon-nitrogen family protein [Oceanicaulis alexandrii HTCC2633] Length = 277 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 31/280 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV--- 57 M + + + Q P+ GD+ NI EA QG +IL ELF Y + V Sbjct: 1 MTETFTMGVLQ-APLGGDMDANIKTISDLVREAAGQGAQVILPPELFQGPYFCKTQVEDW 59 Query: 58 FKKSFI---QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGN-IIAV 111 F ++ C A+ L + + + ++EG L NS+V++DAG + V Sbjct: 60 FATAYPAMEHPCVIAMQKLAQELD-----VAIPVSIYEREGPLYYNSMVMVDAGGKALGV 114 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEF 170 K ++P+ + EK F G + + ++G+ IC D W + + GAE Sbjct: 115 YRKSHIPDGPGYQEKYYFRPGDTGFRVWDTKFGKVGVGICWDQW-FPEAARSMALLGAEM 173 Query: 171 LFSLNA------SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 L A +P R + +S+ +PI N++G +D +F G SF D Sbjct: 174 LLYPTAIGAEPQAPEMDTAAAWRRAMQGHAVSNC-IPIGAANRIGDEDGQVFYGTSFICD 232 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQL-----SQWNYMSD 259 ++ ++ +E +T +D++ + W + D Sbjct: 233 NTGEVKAELGR-TETGVLTA-TFDRKALDTFRAAWGFFRD 270 >gi|229514701|ref|ZP_04404162.1| NAD synthetase [Vibrio cholerae TMA 21] gi|229348681|gb|EEO13639.1| NAD synthetase [Vibrio cholerae TMA 21] Length = 285 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS C A +AV+ L +++ T + LPY Q ED A A Sbjct: 49 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPY---GEQKDEDEAQLALS 105 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H +H + + + +P+ + + N+++R R + Sbjct: 106 FIRPTHSVSVNIKAGVDGLHAASHHALA-NTGLIPSDPAKVDFIKGNVKARARMVAQYEI 164 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 165 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLLAKTLGA-------- 216 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 217 ------PEQLVYKTPTADLEELAPQKADEAALNLTYEQIDDFLE 254 >gi|163785242|ref|ZP_02179912.1| hypothetical protein HG1285_11942 [Hydrogenivirga sp. 128-5-R1-1] gi|159879489|gb|EDP73323.1| hypothetical protein HG1285_11942 [Hydrogenivirga sp. 128-5-R1-1] Length = 247 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 16/225 (7%) Query: 11 QLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAI 70 QLN +G+I N+ K + N + ++L E+F SG+ E+L+ + + Sbjct: 7 QLNLELGNIDKNMEKVFDYLK--NLKKNSIVLLPEMFSSGFDNENLI---THAKQTPKIY 61 Query: 71 DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFI 130 LK +++ I P + G+ N ++D G II R K L + E + F Sbjct: 62 KQLKKLSYEKHLVISGTLPENTRYGIYNKAFVIDNGEIIFKRAKAKL--FKPTGEHKYFK 119 Query: 131 SGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE 189 G +N I LGI+IC ++ + NI L+K+G E L P +K+H Sbjct: 120 EGKNNFDIAESSAGNLGIMICFEL-RFPNISYTLRKKGVEILL----VPAQWGASRKKHI 174 Query: 190 IVTGQISHVHLP--IIYVNQVGGQDELIFDGASFCFD-GQQQLAF 231 V Q + +I + VG ++ + G+S + ++LAF Sbjct: 175 EVLSQARAIETQSFVIVSDTVGKIGKITYAGSSAIYSPWGEKLAF 219 >gi|150026108|ref|YP_001296934.1| NH(3)-dependent NAD(+) synthetase [Flavobacterium psychrophilum JIP02/86] gi|149772649|emb|CAL44132.1| NH(3)-dependent NAD(+) synthetase [Flavobacterium psychrophilum JIP02/86] Length = 268 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 27/196 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L+ Y QK + +IG+SGGIDSA+ A + + + + + QS + A Sbjct: 20 LKTYAQKAKVNGFVIGISGGIDSAVTATLC----AQTGLTVLCVEMPIHQAQSHINRAQ- 74 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG-------IVAENIQSRIRGNILMALS 395 + K + + D + + F E P + N ++R+R L L+ Sbjct: 75 EHIMQLKKNFANVTDTRVNLTPVFESFKTEVPVSNNEAKLNLSLANTRARLRMTSLYYLA 134 Query: 396 NHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 ++ T NK E VG+ T YGD +P+ DL K+ V LA++ N Sbjct: 135 GIHGLLVAGTGNKVEDFGVGFFTKYGDGGVDLSPIADLMKSDVRALATYLN--------- 185 Query: 455 PLTEVIPPSILEKSPS 470 +P SI + +P+ Sbjct: 186 -----VPESIQKAAPT 196 >gi|293410056|ref|ZP_06653632.1| NAD+ synthetase [Escherichia coli B354] gi|291470524|gb|EFF13008.1| NAD+ synthetase [Escherichia coli B354] Length = 275 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLRTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNLPEQVARTIENWYLKTEHKRR 263 >gi|116872170|ref|YP_848951.1| amidohydrolase, putative [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741048|emb|CAK20168.1| amidohydrolase, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 296 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 29/269 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+++G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIKYIKEAHKKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I+ S+ + TLK + GI + + ++ N+ +I+D Sbjct: 61 PLATSFGAERFKWLNEAIEEDSTYVLTLKKLAKELQIGICATYLSKTEQKPQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G +I K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEMILDYAKVHT---CDFSLEILLQSGEGFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +GAE + NA +P N+L R E + G ++ + P + ++FD Sbjct: 177 LKGAEIILVPNACDMNPPRLNQLNSRAFENMVG-VAMANYPGEKWGRSTAFSPIVFDENG 235 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D + + SE F+ E++ D+ Sbjct: 236 ---DYRDNTIIETDDVSEGVFIAEFNLDE 261 >gi|70730928|ref|YP_260669.1| carbon-nitrogen family hydrolase [Pseudomonas fluorescens Pf-5] gi|68345227|gb|AAY92833.1| hydrolase, carbon-nitrogen family [Pseudomonas fluorescens Pf-5] Length = 253 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 8/160 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L +A AQ + GD+ N+A+ +R + A QG+ L++F EL ++GY P+ + + Sbjct: 3 MSVLTLAAAQTASIAGDLPANLARHQRLMQLAAAQGVQLLVFPELSLTGYEPQ--LAAEL 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEG-VLNSVVILDAGNIIAVRDKINLPN 119 + + + L+ VVG P R +G VL ++L +AV K +L Sbjct: 61 ALMPDAPQLQPLRDLARALELTAVVGMPIRLSVDGPVLIGALVLGGDGSLAVYTKQHL-- 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 E+ F++G P+ + + +C D S++ Sbjct: 119 --HAGEESAFVAGRGGAPLPIGGETVALAVCADFCHASHV 156 >gi|154149056|ref|YP_001406680.1| carbon-nitrogen family hydrolase [Campylobacter hominis ATCC BAA-381] gi|153805065|gb|ABS52072.1| hydrolase, carbon-nitrogen family [Campylobacter hominis ATCC BAA-381] Length = 336 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 30/236 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAR----EEANRQGMDLILFTEL-----FISGYP 52 +K LKIA+ V AG++ K R+ E+ + G L++ EL F Sbjct: 1 MKNLKIAL-----VSQKFAGSVLKCRQKSVEMIEKVAKDGAKLVILQELHEWAYFCQSER 55 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL--DAGNIIA 110 E+ ++F ++ +T K G +V + G+ ++ I+ + G I Sbjct: 56 VENFALAENFNESLKFWGETAKK----FGIVLVTSLFEKRAPGLFHNTAIVFENNGEIAG 111 Query: 111 VRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K+++P+ F+EK F G +PI RLG+L+C D W + + +GAE Sbjct: 112 KYRKMHIPDDPNFYEKFYFTPGDLGFEPINTSVGRLGVLVCWDQWY-PEAARLMALKGAE 170 Query: 170 FLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDELIFD 217 L A ++ K ++ V Q H LP+I VN+VG + E I D Sbjct: 171 ILIYPTAIGWFDGDDEAEKSRQLEAWVAVQRGHAVANALPVIAVNRVGFEAEKISD 226 >gi|167633591|ref|ZP_02391915.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0442] gi|254744038|ref|ZP_05201721.1| hydrolase, carbon-nitrogen family protein [Bacillus anthracis str. Kruger B] gi|167530997|gb|EDR93684.1| hydrolase, carbon-nitrogen family [Bacillus anthracis str. A0442] Length = 259 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIFFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMDEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|159464365|ref|XP_001690412.1| hypothetical protein CHLREDRAFT_127918 [Chlamydomonas reinhardtii] gi|158279912|gb|EDP05671.1| predicted protein [Chlamydomonas reinhardtii] Length = 693 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 60/277 (21%), Positives = 102/277 (36%), Gaps = 41/277 (14%) Query: 1 MLKKLKI-AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M ++L + A LN D GN+ + +++ EA +G + EL + GY ED + Sbjct: 1 MPRRLAVLATCNLNQWAMDFEGNLGRIKQSIREAKAKGATYRVGPELEVPGYGCEDHFLE 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + + L +D GI+ VG P + + N V L ++ +R K++L Sbjct: 61 LDTVTHSWEVLAALLADPEGLTDGILVDVGMPVIHRGVMYNCRVFLLNRRVLLIRPKLHL 120 Query: 118 PNYSEFHEKRTFISG------------------------------------YSNDPIVFR 141 N + E R F + + + + R Sbjct: 121 ANDGNYRETRYFATWKHRGKVECHRLPDCVARAAAAAAAAAAAPPPPVDVPFGDAVLKLR 180 Query: 142 DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLP 201 D L CE+++ L G E + + + S + KL +R +++ G + Sbjct: 181 DALLAAETCEELFTPQAPHIDLALAGVEIISNGSGSHHQLRKLNQRLDLIRGATAKAGGV 240 Query: 202 IIYVNQVGGQ-DELIFDGASFCFDGQQQLAFQMKHFS 237 +Y NQ G L FDG + C QL Q F Sbjct: 241 YLYANQRGCDGGRLYFDGCA-CVAVNGQLVAQGGQFG 276 >gi|325265255|ref|ZP_08131980.1| N-carbamoylputrescine amidase [Clostridium sp. D5] gi|324029434|gb|EGB90724.1| N-carbamoylputrescine amidase [Clostridium sp. D5] Length = 289 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 60/299 (20%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---------- 51 + + A+ Q+ D+ NI A R +A QG +IL ELF Y Sbjct: 1 MSETTAAVIQMQ-CTADVQHNIKTAERLVRQAAEQGGQVILLPELFERQYFCQERRYEYY 59 Query: 52 ----PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 PPED + A+ ++ + ++V F + Q + NS ++DA G Sbjct: 60 GFALPPED-----------NPAVCVMQGLAKELELVMIVSFYEKAQNTLYNSAAVIDADG 108 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIW----------K 155 +++ V K ++P+ + EK F G + + R R+G+ IC D W K Sbjct: 109 SLLGVYRKTHIPDDHFYQEKFYFTPGDTGFTVWETRYGRIGVGICWDQWFPETARCLALK 168 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG------ 209 +++ + G+E + +++ ++ ++ G + +P+ N+ G Sbjct: 169 GADLILYPTAIGSEPILECDSAGHWRRAMQ-------GHAAANIVPVAAANRFGLEKVEP 221 Query: 210 -----GQ-DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSD 259 GQ L F G+SF D ++ Q E+ + ++ ++ +W D Sbjct: 222 CQENAGQSSSLEFYGSSFIADETGEILCQAGRSEEKVLCARFDFEKIRKERMEWGLFRD 280 >gi|302186010|ref|ZP_07262683.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas syringae pv. syringae 642] Length = 264 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 23/226 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ DI+GN+ + + + A QG +++ E+F+SGY + Sbjct: 1 MRVALYQCPPLPLDISGNLTRLEQQAQAAAEQGAQVLICPEMFLSGYNIGAQAVAELAQA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + + G I+ G+ R + N+V ++D+ L NY + Sbjct: 61 QDGPAATRIAAIAQASGIAILYGYAERATDRQIYNAVQLIDS-------QGTRLCNYRKT 113 Query: 124 H-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 H +K F +G + P+V RLG+LIC D+ N + L GAE + + N Sbjct: 114 HLFSELDKSMFAAGDDHYPVVELNGWRLGLLICYDVEFPENT-RRLALAGAELILVPTAN 172 Query: 176 ASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 PY + + R H ++Y N G + E+ + G S Sbjct: 173 MLPYDFVCDVTVRARAFEN-----HCYVVYANYCGSEGEIRYCGLS 213 >gi|256819755|ref|YP_003141034.1| NAD+ synthetase [Capnocytophaga ochracea DSM 7271] gi|256581338|gb|ACU92473.1| NAD+ synthetase [Capnocytophaga ochracea DSM 7271] Length = 256 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 28/196 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAA 341 ++ Y + ++IG+SGG+DSA+ + + + + T+ L +S + A Sbjct: 12 MKTYAENARVKGLVIGVSGGVDSAVVSTLC----ARTGLPTLCLEMPIHQAESHVSRAQE 67 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG------IVAENIQSRIRGNILMALS 395 + L Y +++L + QF+ + P + N ++R+R L + Sbjct: 68 HIEFLKAHYP--NVNNLRVDLTPVFDQFVTQIPPTDKSTYEMALANTRARLRMTTLYYFA 125 Query: 396 NHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 +++ T NK E VG+ T YGD +P+ DL K++V++L + Sbjct: 126 GLEGYIVVGTGNKIEDFGVGFFTKYGDGGVDISPIADLMKSEVYKLGKYLQ--------- 176 Query: 455 PLTEVIPPSILEKSPS 470 IP SIL+ PS Sbjct: 177 -----IPQSILKAKPS 187 >gi|225009964|ref|ZP_03700436.1| NAD+ synthetase [Flavobacteria bacterium MS024-3C] gi|225005443|gb|EEG43393.1| NAD+ synthetase [Flavobacteria bacterium MS024-3C] Length = 262 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 17/169 (10%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L++Y QK +IG+SGGIDSA LCA + L + +P Q+ + Sbjct: 14 LKEYAQKAGAKGFVIGVSGGIDSAVTATLCAKTGLPLL------CLDMPIHQAKNQT-DR 66 Query: 339 AAACAKALGCKY-----DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 A+ L Y +P+ + + EE + N ++R+R L Sbjct: 67 ASKHVLWLQENYPNTTKTTVPLTPVFDSLVQAFPAVKNEEDRFMSLANTRARLRMTSLYY 126 Query: 394 LSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 + ++ T NK E VG+ T YGD +P+ DL KT VF L Sbjct: 127 FAALHGYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLLKTAVFALG 175 >gi|256269444|gb|EEU04739.1| Qns1p [Saccharomyces cerevisiae JAY291] Length = 714 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 121/594 (20%), Positives = 206/594 (34%), Gaps = 129/594 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ + A +G L + EL I+GY D + Sbjct: 5 ITLATCNLNQWALDFEGNRDRILQSIKIAKERGARLRVGPELEITGYGCLDHFLENDVCL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + G + +G P + N ++ G I+ +R KI L N + Sbjct: 65 HSWEMYAQIIKNKETHGLILDIGMPVLHKNVRYNCRLLSLDGEILFIRPKIWLANDGNYR 124 Query: 125 EKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F ++G + + I D +G CE+++ + Sbjct: 125 EMRFFTPWMKPGVVEDFILPPEIQKVTGQRLVPFGDAVINSLDTCIGTETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFD- 217 + G E + + + S + KL KR +++ +Y NQ G D L +D Sbjct: 185 HIAMSLDGVEIMTNSSGSHHELRKLNKRLDLILNATKRCGGVYLYANQRGCDGDRLYYDG 244 Query: 218 -------------GASFCFDG----------QQQLAFQMKHFSE--QNFMTEWHYDQ--- 249 G+ F D ++ +++ S Q + E + + Sbjct: 245 CALIAINGTIVAQGSQFSLDDVEVVTATVDLEEVRSYRAAVMSRGLQASLAEIKFKRIDI 304 Query: 250 --QLSQWNYMSDDSAST------MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +L+ D + Y +EE A AC + DY+++ N + LSG Sbjct: 305 PVELALMTSRFDPTVCPTKVREPFYHSPEEEIALGPACWMW--DYLRRCNGTGFFLPLSG 362 Query: 302 GIDSALCAAI-------AVDALGKENVQTIMLPYKYT---------SPQSLED------- 338 GIDS A I DA N Q I K T SPQ+L Sbjct: 363 GIDSCATAMIVHSMCRLVTDAAQNGNEQVIKDVRKITRSGDDWIPDSPQNLASKIFHSCF 422 Query: 339 -------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 A + A+G + L + LV+ SL ++P Sbjct: 423 MGTENSSKETRNRAKDLSNAIGSYHVDLKMDSLVSSVVSLFEVATGKKPIYKIFGGSQIE 482 Query: 376 GIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +NIQ+R+R + + + N ++L ++N E GY T Y S Sbjct: 483 NLALQNIQARLRMVLSYLFAQLLPWVRGIPNSGGLLVLGSANVDECLRGYLTKYDCSSAD 542 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + ++ + I L +P+AEL P D Sbjct: 543 INPIGGISKTDLKRFIAYASKQ--------YNMPILNDFLNATPTAELEPMTKD 588 >gi|229506630|ref|ZP_04396139.1| NAD synthetase [Vibrio cholerae BX 330286] gi|229510572|ref|ZP_04400052.1| NAD synthetase [Vibrio cholerae B33] gi|229517296|ref|ZP_04406741.1| NAD synthetase [Vibrio cholerae RC9] gi|229526171|ref|ZP_04415575.1| NAD synthetase [Vibrio cholerae bv. albensis VL426] gi|229605107|ref|YP_002875811.1| NAD synthetase [Vibrio cholerae MJ-1236] gi|229336329|gb|EEO01347.1| NAD synthetase [Vibrio cholerae bv. albensis VL426] gi|229345332|gb|EEO10305.1| NAD synthetase [Vibrio cholerae RC9] gi|229353017|gb|EEO17957.1| NAD synthetase [Vibrio cholerae B33] gi|229356981|gb|EEO21899.1| NAD synthetase [Vibrio cholerae BX 330286] gi|229371593|gb|ACQ62015.1| NAD synthetase [Vibrio cholerae MJ-1236] Length = 285 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS C A +AV+ L +++ T + LPY Q ED A A Sbjct: 49 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPY---GEQKDEDEAQLALS 105 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H +H + + + +P+ + + N+++R R + Sbjct: 106 FIRPTHSVSVNIKAGVDGLHAASHHALA-NTGLIPSDPAKVDFIKGNVKARARMVAQYEI 164 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 165 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLLAKTLGA-------- 216 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 217 ------PEQLVYKTPTADLEELAPQKADEAALNLTYEQIDDFLE 254 >gi|218296056|ref|ZP_03496825.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermus aquaticus Y51MC23] gi|218243433|gb|EED09962.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermus aquaticus Y51MC23] Length = 291 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 10/177 (5%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 A+ Q P + ++ + R E ++++ E ++GY + V + + + Sbjct: 5 AVLQFRPEKSRLKESLLRLRAHLEALRPHAPEVVVLPEAALTGYFLQGGVRELALTR--- 61 Query: 68 SAIDTLKSDTH-----DGGAGIVVGFPRQDQEGVLNSVVILDAGN-IIAVRDKINLPNYS 121 + L S+ H +G +VVGF +D NS L+ + ++ V K+ LP Y Sbjct: 62 HELLELFSELHQALGWEGLLDVVVGFYERDGGAYYNSAAYLELPHRVVHVHRKVFLPTYG 121 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F E+R G R R ILICED W +S GAE ++ ASP Sbjct: 122 VFDEERYLARGSRVAAFTTRFGRAAILICEDFW-HSITAAIAALDGAEVIYVPAASP 177 >gi|120598531|ref|YP_963105.1| NAD synthetase [Shewanella sp. W3-18-1] gi|189083413|sp|A1RIQ6|NADE_SHESW RecName: Full=NH(3)-dependent NAD(+) synthetase gi|120558624|gb|ABM24551.1| NH(3)-dependent NAD(+) synthetase [Shewanella sp. W3-18-1] Length = 276 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 43/239 (17%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQT--- 323 E E + V ++ +++ +++G+SGG+DS+ LC +AVD+L E + Sbjct: 16 EPEFEVQRRVAFIKTTLKEARSKALVLGISGGVDSSTAGRLCQ-LAVDSLNSEQANSDYQ 74 Query: 324 ---IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF-SLMSQFLQEEPS---- 375 + LPY + E AC K + +H V+ + ++ F++ + Sbjct: 75 FIAVRLPY-HIQKDEHEAQLACQFIQPSKLVTVNVHQGVDAVHGATLAAFVEAGLTLPDA 133 Query: 376 ---GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 V N+++R+R L+ +++ T + +E G+ T +GD + PL L Sbjct: 134 AKVDFVKGNVKARMRMIAQYELAGLVGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGL 193 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 K QV QLA++ + P S++ K+P+A+L +Q P+L+D Sbjct: 194 NKRQVRQLAAYLGA--------------PESLVYKAPTADLEDNQ---------PLLED 229 >gi|228476284|ref|ZP_04060985.1| NAD+ synthetase [Staphylococcus hominis SK119] gi|228269567|gb|EEK11073.1| NAD+ synthetase [Staphylococcus hominis SK119] Length = 278 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 34/240 (14%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPY-KYTSP 333 +++YVQ + F +++G+SGG DS L A +AV+ L KE + + LPY K Sbjct: 31 IKNYVQSHTFIESLVLGISGGQDSTLTGKLAQLAVEELRKEGRECQFIAVKLPYGKQKDA 90 Query: 334 QSLEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 +EDA + ++ P D SL + E + N ++R R + Sbjct: 91 DEVEDALHFIQPDEVITVNIKPAVD--QSVASLKEAGI--ELTDFQRGNEKARERMKVQF 146 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 +++++ +++ T + +E G+ T YGD + P+ L K Q QL + + Sbjct: 147 SIASNRSGIVIGTDHSAENITGFYTKYGDGAADIAPIFGLDKRQGRQLLEYLEA------ 200 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESFINN 506 P + EK P+A+L +P D+E+L Y +DD + K + + ++ I N Sbjct: 201 --------PTHLYEKVPTADLEDDKPQLPDEEALGVTYNQIDDYLEGKEVPSDAKTTIEN 252 >gi|304310448|ref|YP_003810046.1| Glutamine-dependent NAD+ synthetase [gamma proteobacterium HdN1] gi|301796181|emb|CBL44387.1| Glutamine-dependent NAD+ synthetase [gamma proteobacterium HdN1] Length = 275 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 42/246 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 + + ++ + +++G+SGG+DS L +A A+ + +T + LPY+ Sbjct: 35 IAETLKNSGLKTLVLGISGGVDSTLAGRLAQLAVERLRAETKDHHYRFIAVRLPYQTQKD 94 Query: 334 QSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG--IVAENIQSRIRGNI 390 ++ DA A + + + + I V + + + + P+ V N+++R+R Sbjct: 95 EA--DAQAALRFIAADEETTVNIAAAVQGLCAEIPRIAELAPAKADFVRGNVKARVRMVA 152 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 ++N + +++ T + +E +G+ T +GD + PL L K QV I Sbjct: 153 QFTIANATAGLVIGTDHAAEAVMGFFTKFGDGACDLAPLTGLVKGQV---------RAIA 203 Query: 451 SGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES-----------LPPYPILDDIIKRI 496 LG P ++ K P+A EL P + D+++ L PI D +RI Sbjct: 204 YHLGA-----PEAVAYKIPTADLEELNPLKPDEDAYGVTYEEIDAFLHQQPISDAAYERI 258 Query: 497 VENEES 502 +S Sbjct: 259 TRTYDS 264 >gi|330812724|ref|YP_004357186.1| NAD(+) synthetase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380832|gb|AEA72182.1| putative NAD(+) synthetase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 279 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/255 (21%), Positives = 111/255 (43%), Gaps = 49/255 (19%) Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 M ++ E D+QL++ ++ + +I + ++++ Sbjct: 1 MTTLVQERIARELGIDRQLTRGGEATEVARRIEFI----------------KQILRESGC 44 Query: 293 HKVIIGLSGGIDS----ALCAAIAVDALGKENVQT----IMLPYKYTSPQSLEDAAACAK 344 +++G+SGG+DS LC +AV+ L E+ + + LPYK + + +DA A Sbjct: 45 KSLVLGISGGVDSLTAGRLCQ-LAVEQLRGEDYEARFIAVRLPYKAQADE--QDAQASLD 101 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAE----NIQSRIRGNILMALSNHS 398 + + D++ ++ LM + +P + + N ++R R A++N S Sbjct: 102 FI--RPDLITTSNIAAGVDGLMGSIAIDGLQPGAELIDFAKGNAKARARMLAQYAIANLS 159 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +++ T + +E +G+ T +GD + PL L KTQV LA + Sbjct: 160 NGLVVGTDHGAEAVMGFFTKFGDGACDLAPLSGLTKTQVRLLADAMGA------------ 207 Query: 459 VIPPSILEKSPSAEL 473 P ++ K+P+A+L Sbjct: 208 --PAYLVRKAPTADL 220 >gi|332767189|gb|EGJ97384.1| nadE [Shigella flexneri 2930-71] Length = 273 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ------TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L +E + LPY + Sbjct: 28 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETRNESLQFIAVRLPYGVQA 87 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 88 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 139 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 140 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 193 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 194 ---LTALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 237 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 238 G-KNLPEQVARTIENWYLKTEHKRR 261 >gi|301026470|ref|ZP_07189902.1| NAD+ synthetase [Escherichia coli MS 69-1] gi|300395536|gb|EFJ79074.1| NAD+ synthetase [Escherichia coli MS 69-1] Length = 275 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + ++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMTINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNLPEQVARTIENWYLKTEHKRR 263 >gi|229522890|ref|ZP_04412304.1| NAD synthetase [Vibrio cholerae TM 11079-80] gi|229527821|ref|ZP_04417212.1| NAD synthetase [Vibrio cholerae 12129(1)] gi|229334183|gb|EEN99668.1| NAD synthetase [Vibrio cholerae 12129(1)] gi|229340107|gb|EEO05115.1| NAD synthetase [Vibrio cholerae TM 11079-80] Length = 285 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS C A +AV+ L +++ T + LPY Q ED A A Sbjct: 49 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPY---GEQKDEDEAQLALS 105 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H +H + + + +P+ + + N+++R R + Sbjct: 106 FIRPTHSVSVNIKAGVDGLHAASHHALA-NTGLIPSDPAKVDFIKGNVKARARMVAQYEI 164 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 165 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLLAKTLGA-------- 216 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 217 ------PEQLVYKTPTADLEELAPQKADEAALNLTYEQIDDFLE 254 >gi|107101501|ref|ZP_01365419.1| hypothetical protein PaerPA_01002544 [Pseudomonas aeruginosa PACS2] Length = 270 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 17/160 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-K 60 + K+ +A Q+ P +G N+ A RA EA R+G ++++ EL SGY VF + Sbjct: 1 MAKVTVACCQIAPRIGAQEHNLRLAERAIREAARRGANVVVLPELAASGY-----VFADR 55 Query: 61 SFIQACSSAIDTLKSDTHDGGAG-----IVVGF-PRQDQEGVLNSVVILDAGNIIAVRDK 114 A + D AG IV GF R D + V NS ++DA + A+ K Sbjct: 56 GEALALAETRDGPSLGLWKALAGELDLVIVGGFCERLDPQRVANSAALVDADGVRAIYRK 115 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVF-RDIRLGILICEDI 153 +L N E F +G P+V R R+ +++C D+ Sbjct: 116 AHLWN----EEGGIFEAGEQPPPVVATRFGRIAVMVCYDL 151 >gi|42526908|ref|NP_972006.1| NAD synthetase [Treponema denticola ATCC 35405] gi|41817223|gb|AAS11917.1| glutamine-dependent NAD+ synthetase, putative [Treponema denticola ATCC 35405] Length = 650 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 51/288 (17%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQ-----TIMLPYKYTSPQSLEDAAACAKALGC 348 K ++G+SGG+DS+L + AL N+ + +P T+ ++ +A+A AK LGC Sbjct: 348 KCLVGISGGLDSSLALLASAYALKLLNIDLKNLYAVTMPGFGTTEKTKNNASALAKTLGC 407 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +PI + FS + Q + I EN Q+R R ILM +N +++ + + Sbjct: 408 TLLEIPIEKAMMQHFSDIGQDIDNH--DIAYENAQARERTQILMDKANQIGGIMVGSGDL 465 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKT------------QVFQLASWRN-------SHGI 449 SE ++G+ T GD + + KT ++F +N S+ I Sbjct: 466 SESALGWMTYGGDQMSMYEVNSSIPKTLLKDCILAFAENKIFFEDEKKNNAFFELLSNII 525 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE--------- 500 + + P E++PP E S Q ++ + PY + D I + N Sbjct: 526 NTPVSP--ELLPPENGEIS--------QKTEDIIGPYELHDFFIYHAIGNGFSPKKVYFL 575 Query: 501 --ESFINNDQEYNDETVRYVEHL---LYGSEYKRRQAPVGTKITAKSF 543 E+F N+ D+ ++++ + ++KR +P G +T S Sbjct: 576 ACEAFKNSSYS-KDDILKWLNLFYKRFFSQQFKRSCSPEGASVTGFSL 622 >gi|325168571|ref|YP_004280361.1| nitrilase [Agrobacterium sp. H13-3] gi|40890207|gb|AAR97448.1| nitrilase [uncultured organism] gi|325064294|gb|ADY67983.1| nitrilase [Agrobacterium sp. H13-3] Length = 329 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 20/172 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------- 52 M K ++ A Q+ P + AG + + A EA +G +LI+F E F+ YP Sbjct: 1 MPKTVRAAAVQIAPDLTSRAGTVERVLNAIAEAADKGAELIVFPETFVPWYPYFSFVLPP 60 Query: 53 ----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNI 108 PE L + + S+ + A IV+G +D + N+ +I DA Sbjct: 61 VQQGPEHLRLYEEAVTVPSAETRAVADAARKRNAVIVLGVNERDHGSLYNTQLIFDADGS 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 + ++ + P Y HE+ + G V R+G L C W++ N Sbjct: 121 LKLKRRKITPTY---HERMIWGQGDGAGLKVVDTAVGRVGALAC---WEHYN 166 >gi|319955966|ref|YP_004167229.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Nitratifractor salsuginis DSM 16511] gi|319418370|gb|ADV45480.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nitratifractor salsuginis DSM 16511] Length = 302 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 97/246 (39%), Gaps = 40/246 (16%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVFKKSFIQACSSAI 70 GD A AK R A A +G +L++ EL S Y P + +SF + Sbjct: 11 TGDKASMQAKTREAVLRAAGEGAELVVLQELHQSEYFCQCEDPRFFDYARSF----EEDL 66 Query: 71 DTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRT 128 + G +V + G+ N+ V+ + G+I K+++P+ F+EK Sbjct: 67 RYWSGVAREAGVVLVTSLFEERAPGIYHNTAVVFEKDGSIAGKYRKMHIPDDPGFYEKFY 126 Query: 129 FISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 F G +PI RLG+L+C D W + + +GA+ L A Y +R Sbjct: 127 FTPGDLGFEPIDTSVGRLGVLVCWDQW-YPEAARIMTLKGAQLLLYPTAIGYLECPSDRR 185 Query: 188 HEI-----------------VTGQISHV---HLPIIYVNQVGGQDE-------LIFDGAS 220 E+ + Q H +P++ VN+VG + + + F G S Sbjct: 186 DELCEKENTPEERRKMREAWIAVQRGHAVANGVPVLAVNRVGKEKDPSGVLEGIRFWGHS 245 Query: 221 FCFDGQ 226 F F Q Sbjct: 246 FAFGPQ 251 >gi|83595993|gb|ABC25352.1| NH(3)-dependent NAD(+) synthetase [uncultured marine bacterium Ant29B7] Length = 341 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 32/195 (16%) Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA-----A 340 Y K ++G+SGG+DSAL A + AL ++ + LP + P ++ A Sbjct: 88 YASKAGAKGFVLGVSGGVDSALTAHLC--ALTGLELRLMELPI-HQPPSHVQRGKDMIDA 144 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE----NIQSRIRGNILMALSN 396 C K + + DL + ++ PSG + + N ++R+R L A + Sbjct: 145 LCGKHAQVTSRCVDLTDLFDQHLEALNL-----PSGRLTQLALINTRARLRMTTLYAEAQ 199 Query: 397 HSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 +++ T NK E +G+ T YGD +P+ DL K++V LA + Sbjct: 200 AHGLLVVGTGNKVEDFGIGFYTKYGDGGVDLSPIADLTKSEVQALARFVG---------- 249 Query: 456 LTEVIPPSILEKSPS 470 +P +IL +PS Sbjct: 250 ----VPAAILTATPS 260 >gi|90417955|ref|ZP_01225867.1| putative hydratase [Aurantimonas manganoxydans SI85-9A1] gi|90337627|gb|EAS51278.1| putative hydratase [Aurantimonas manganoxydans SI85-9A1] Length = 289 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 8/170 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLVFKKSF 62 ++I+ AQ P +G++ N+ + + EA G LI+ EL SGY E + + S Sbjct: 7 IQISCAQFEPRIGEVERNVEASLKLIAEAADSGSRLIVLPELCNSGYVLESREEAYALSE 66 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A S+I S + G IV GF +D + NS +++ +I K N+ Sbjct: 67 DVATGSSIARWASLAAERGLYIVAGFLERDGIKLYNSAIVIGPDGVIGTYRK----NHLW 122 Query: 123 FHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL 171 E F G P+ R+G+LIC D W + L QGA+ + Sbjct: 123 ADEALYFERGDLGFPVFHTPFGRVGVLICYDGWF-PEAWRILALQGADIV 171 >gi|260579711|ref|ZP_05847570.1| NH(3)-dependent NAD(+) synthetase [Corynebacterium jeikeium ATCC 43734] gi|258602141|gb|EEW15459.1| NH(3)-dependent NAD(+) synthetase [Corynebacterium jeikeium ATCC 43734] Length = 313 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 67/284 (23%), Positives = 112/284 (39%), Gaps = 46/284 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML- 326 P + A+ V + DY+Q +++G+SGG DS L + A+ + N QT Sbjct: 40 PTIDPAAEVEHRVQFITDYLQTTGVRTLVLGISGGQDSTLAGRLCQLAVERLNQQTAHTG 99 Query: 327 ------PYKYTS------PQSLEDAAACA-----KALGCKYDVLPIHDLVNHFFSLMSQF 369 PY++ + Q+ ED A A ++G ++ D S Sbjct: 100 QAGQEQPYRFCAVRLPYGVQADEDDAQVALKFIEPSMGVTVNIKEATDASARATSEALNI 159 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 Q NI++R R AL+ +++ T + +E G+ T +GD + PL Sbjct: 160 AQV--GDFNKGNIKARERMIAQYALAGELGGLVVGTDHAAEAITGFYTKHGDGAADLVPL 217 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-P 485 L K R + LG P S +K P+A+L RP D+ +L Sbjct: 218 AGLTK---------RQGAALLRHLG-----APDSTWQKVPTADLEEDRPALPDEAALGVT 263 Query: 486 YPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 Y LDD ++ N + + + ++E L + S +KR Sbjct: 264 YAQLDDYLES--------TNGAADIDPQVADHIEKLWFRSRHKR 299 >gi|325268888|ref|ZP_08135513.1| para-aminobenzoate synthase [Prevotella multiformis DSM 16608] gi|324988860|gb|EGC20818.1| para-aminobenzoate synthase [Prevotella multiformis DSM 16608] Length = 294 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 +VVI G+I K+++P+ ++EK F G P+ RLG+L+C D W Sbjct: 100 TAVVIEKDGSIAGRYRKMHIPDDPAYYEKFYFTPGDLGFHPVDTSVGRLGVLVCWDQWY- 158 Query: 157 SNICKHLKKQGAEFLFSLNASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQV 208 + + QGAE L A Y K ++R T H LP++ VN+V Sbjct: 159 PEAARLMALQGAEILVYPTAIGYESSDTDEEKQRQREAWTTVMRGHAVANGLPVVAVNRV 218 Query: 209 G------GQDELI-FDGASFCFDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMS 258 G GQ I F G+SF Q +L F+ E++ + H +Q W ++ Sbjct: 219 GYEPDPSGQTGGIRFWGSSFVAGPQGELLFRACDKDEEHTVVPVDLDHSEQVRRWWPFLR 278 Query: 259 D 259 D Sbjct: 279 D 279 >gi|321263781|ref|XP_003196608.1| NAD+ synthase (glutamine-hydrolyzing) [Cryptococcus gattii WM276] gi|317463085|gb|ADV24821.1| NAD+ synthase (glutamine-hydrolyzing), putative [Cryptococcus gattii WM276] Length = 705 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 116/557 (20%), Positives = 193/557 (34%), Gaps = 128/557 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L QL D GN + R+ A +G L + EL I GY + ++ + Sbjct: 3 LVTVATQLRQWALDFEGNCERIIRSIAIAKSRGATLRVGPELEIPGYGCDTMLHSWEVLA 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + K D +G P + + N VI+ G I+ +R K+ + N + Sbjct: 63 KILQS-EEAKDIICD------IGMPLEHKNNNYNCRVIIYNGKILLIRPKMWMANDGNYR 115 Query: 125 EKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSNI 159 E R F ++G + P I D +GI +CE+++ ++ Sbjct: 116 ELRHFTPWHKHRQVENHSLPHMIRTVTGQNYVPFGDAVIATEDTVIGIELCEELFTPASP 175 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + S + KL +R E++ + +Y NQ G D L +DG Sbjct: 176 HILMGLDGVEIFTNSSGSHHELRKLNRRVELIKEATMKLGGIYLYANQQGCDGDRLYYDG 235 Query: 219 ASFCFDGQQQLAFQMKHF--SEQNFMT-----------------EWHYDQQLSQWNYMSD 259 A Q LA Q F SE +T Q + ++D Sbjct: 236 ACLIAMNGQILA-QGSQFSLSEVEVVTATVDLRAVRAHRTTSSRRMQSAQAEAYERVVAD 294 Query: 260 ---DSASTMYIPLQEEEADYN--------------ACVLSLRDYVQKNNFHKVIIGLSGG 302 D + + QE + N AC L DY++++ + LSGG Sbjct: 295 TRLDGGEQIKVGFQETKGSMNVSYHTPEEEIALGPACWLW--DYLRRSRTQGYFLPLSGG 352 Query: 303 IDSALCAAIA---------VDALGKENV-----------------------------QTI 324 IDS A I A G E V T Sbjct: 353 IDSCATAVIVHSMCRLVVEAAANGDEQVIADARRIANEPDDSTYVPKDPREFAGRIFHTC 412 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---------- 374 + + +S ++ E A A A+G + L + V+ + S + P Sbjct: 413 YMGTENSSNETRERAKNLANAIGAYHVDLNMDTAVSAVKGIFSLVTGKTPQFKVHGGTNA 472 Query: 375 SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSGGF 426 + +NIQ+R+R +L + + +L L ++N E GY T Y S Sbjct: 473 ENLALQNIQARLRMVVSYMFAQLLPWVRGKNGGLLVLGSANVDESLRGYFTKYDCSSADV 532 Query: 427 NPLKDLYKTQVFQLASW 443 NP+ + K + + +W Sbjct: 533 NPIGGISKVDLKRFIAW 549 >gi|300122933|emb|CBK23940.2| unnamed protein product [Blastocystis hominis] Length = 258 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 39/215 (18%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN--VQTIMLPYK--YTSPQSLEDAAAC 342 +++ ++ +SGGIDSA+ + A+ E+ +Q I+ + ++S + A C Sbjct: 1 MRQCGLKAAVVSVSGGIDSAVTLGLMKHAMEMEDSPIQRILGISQPIHSSAWAYNRAMEC 60 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS-RIRGNILMALSNHSK-- 399 KALG V+ D + F SL + L + +GI+ + S ++R MA S+ + Sbjct: 61 GKALGVDIIVV---DQTSVFDSLKT--LVDTATGIIGNDFSSGQLRS--YMASSSAPRLI 113 Query: 400 ----------AMLLTTSNKSEIS-VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ T N+ E +GY GD + DL+K++VF Sbjct: 114 PSARPQSGTPCVVMGTGNRDEDGYLGYFCKAGDGVVDVQLIADLHKSEVF---------A 164 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + LG +P SILE PSA+L QTD+E L Sbjct: 165 VGRALG-----VPASILESPPSADLWEGQTDEEEL 194 >gi|300726536|ref|ZP_07059982.1| hydrolase, carbon-nitrogen family [Prevotella bryantii B14] gi|299776264|gb|EFI72828.1| hydrolase, carbon-nitrogen family [Prevotella bryantii B14] Length = 294 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 20/181 (11%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 +VVI G I K+++P+ ++EK F G PI +LGIL+C D W Sbjct: 100 TAVVIEKDGTIAGKYRKMHIPDDPAYYEKFYFTPGDLGFKPIQTSLGKLGILVCWDQWY- 158 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE--------IVTGQISHVHLPIIYVNQV 208 + + QGAE L A Y K+ E ++ G LP+I VN+V Sbjct: 159 PEAARLMALQGAEILIYPTAIGYALYDTKEEQERQRMAWTSVMRGHAVANGLPVIAVNRV 218 Query: 209 GGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMS 258 G + + + F G+SF Q +L +Q E++ + + H ++ W ++ Sbjct: 219 GFEPDPSNQTGGIQFWGSSFIAGPQGELHYQASKEEEESVIIDIDLDHCEEVRRWWPFLR 278 Query: 259 D 259 D Sbjct: 279 D 279 >gi|291335238|gb|ADD94859.1| nitrilase [uncultured marine bacterium MedDCM-OCT-S04-C72] Length = 332 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 24/186 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PEDL 56 + +K+A AQ+ PV+ + G++ + A EA QG++LI+F E F+ YP + Sbjct: 1 MTTVKVAAAQIRPVLFSLDGSLQRVLDAMAEAAAQGVELIVFPETFLPYYPYFSFVEPPV 60 Query: 57 VFKKSFIQACSSAI-------DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNI 108 + +S + A+ D + + G +++G +D + N+ ++ ++ G + Sbjct: 61 LMGRSHLALYEQAVVVPGPVTDAVAAAARQYGMQVLLGVNERDGGTLYNTQLLFNSCGEL 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKH--LK 164 + R KI P Y HE+ + G + V + R+G L C W++ N L Sbjct: 121 VLKRRKIT-PTY---HERMVWGQGDGSGLKVVQTPLARVGALAC---WEHYNPLARYALM 173 Query: 165 KQGAEF 170 QG E Sbjct: 174 AQGEEI 179 >gi|189426520|ref|YP_001953697.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter lovleyi SZ] gi|189422779|gb|ACD97177.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter lovleyi SZ] Length = 262 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 13/211 (6%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 GD+ N+A R A + QG++L + E++ +G+ ++LV Q + + L Sbjct: 19 GDLDANLAYVRTALKRVAEQGVNLAVLPEMWSTGFAYKNLV---ELAQRTEAVVAELCEL 75 Query: 77 THDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 + IV P +G V N++ ++D G ++A K++L +S E R F G S Sbjct: 76 SAQYKLVIVGSQPEPADDGRVFNTIHVVDNGQMVARYRKLHL--FSLLGEDRAFKGGDSW 133 Query: 136 DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH--EIVTG 193 ++G++IC D+ + + + L +GA + P K ++ H ++ Sbjct: 134 CLAETSIGKVGVIICYDL-RFPELSRRLALEGARVI----CVPAQWPKPRQEHWRTLLRA 188 Query: 194 QISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + L I+ N G +L F G S D Sbjct: 189 RAIENQLYIVSCNACGQIGKLDFFGMSMVID 219 >gi|29833434|ref|NP_828068.1| hydrolase [Streptomyces avermitilis MA-4680] gi|29610557|dbj|BAC74603.1| putative hydrolase [Streptomyces avermitilis MA-4680] Length = 262 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 21/224 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ Q + G IA N+ A A G L++ E+F++GY D V + + Sbjct: 1 MRTALLQSSGRPGSIAENLKVLDEAAGRAAAAGAGLVVAPEMFLTGYAIGDDVPRLAEPA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 SA D + G I G+P + E V NS ++ A D L NY + H Sbjct: 61 DGDSA-DAVAETASRHGVAIAYGYPERAGEQVFNSAQLISA-------DGTRLANYRKTH 112 Query: 125 -----EKRTFISGYSNDPIV---FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 E+ F G + P+V +R+G++IC D+ N+ H G + L A Sbjct: 113 LFGCFERDHFTPG--DQPVVQTELNGLRVGLMICYDVEFPENVRAH-ALAGTDLLVVPTA 169 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 H ++ + + + YVN+VG + E F G S Sbjct: 170 Q--MHPFQFVAQSVIPVRAFENQMYVAYVNRVGQEGEFEFVGLS 211 >gi|289451032|gb|ADC93948.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Leptospira interrogans serovar Autumnalis] Length = 261 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 5/150 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ LN D A N+ + EA R G+DL++F E+ ++G+ V + Sbjct: 1 MKIALVSLNIKWEDKAYNLEHCKNLICEAVRYGVDLVIFPEMTLTGFSMNTEVIAED--P 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR-DKINLPNYSEF 123 S +ID + + +V G + + LN++V + I R DKI+ +++ Sbjct: 59 NNSPSIDAFQKLAKENCVALVFGLVLKKENKALNTLVFISKDGIEKTRYDKIHPFSFAT- 117 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDI 153 E R F G + + ++ G IC D+ Sbjct: 118 -EDRYFEGGRNLSKLTLSNLTFGFTICYDL 146 >gi|169840108|ref|ZP_02873296.1| NH3-dependent NAD+ synthetase [candidate division TM7 single-cell isolate TM7a] Length = 164 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 18/139 (12%) Query: 359 VNHFFSLMSQFLQEEPSGIVA--ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 VN L+SQ P A N +RIR +L +S + T N SE VGY Sbjct: 5 VNDLKELISQQTGVNPDEFDAYKTNQPARIRMAVLYGISAIVGGRVANTCNLSEDFVGYS 64 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T +GD +G F+P+ D KT+V +L S LG +P L+K P + Sbjct: 65 TKFGDAAGDFSPISDFTKTEVRKLGSE---------LG-----LPEMFLKKVPEDGMS-G 109 Query: 477 QTDQESLP-PYPILDDIIK 494 ++D+E L Y +LD+ I+ Sbjct: 110 KSDEEKLGFSYEVLDEYIR 128 >gi|255101908|ref|ZP_05330885.1| putative carbon-nitrogen hydrolase [Clostridium difficile QCD-63q42] Length = 268 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 15/256 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+KI I Q + V+GD+ NI KA ++ +QG D+I ELF +GY E L K Sbjct: 1 MGRKVKIGIIQQHSVLGDVKKNIEKAVEMIDDLGKQGADIICLPELFATGYNLESLGGVK 60 Query: 61 S--FIQACSSAIDTLKSDTHDGGAGIVV---GFPRQDQEGVLNSVVILD-AGNIIAVRDK 114 + I+ + I+ S+ ++ G + V NS VI D G I+ K Sbjct: 61 TLELIREHNKYIEESMSEAAKRNNVYLISPYGTLEKGSTHVYNSAVIFDRKGKIMGEYCK 120 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +L + + + G + D R G++IC D + + L +G+E +F Sbjct: 121 NHL-----WSLEAVYFKGGEKVEVYDADFGRFGVMICYDA-GFPEVSRELTLKGSEIIFI 174 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +A + + V+ + + + VN V LI G S + + + Q+ Sbjct: 175 PSAWRIQDEDMWDLN--VSQRALENTVYTVGVNLVSNDSNLILFGKSKICNPRGTVITQL 232 Query: 234 KHFSEQNFMTEWHYDQ 249 + E+ ++E D+ Sbjct: 233 DTYREKYVLSEIDLDE 248 >gi|312886518|ref|ZP_07746126.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Mucilaginibacter paludis DSM 18603] gi|311300921|gb|EFQ77982.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Mucilaginibacter paludis DSM 18603] Length = 288 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 23/250 (9%) Query: 31 EEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF 88 EEA RQG+ ++ E+F + Y P +D + S D + I+V Sbjct: 39 EEAGRQGVQILCLQEIFSTPYFCPGQDAKWYASAESVPGPTTDLMAGYAKKYNMVIIVPI 98 Query: 89 PRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV-FRDIRL 145 ++Q GVL N+ ++DA G + K ++P+ + F EK F G P+ + ++ Sbjct: 99 YEKEQPGVLYNTAAVIDADGTYLGKYRKNHIPHTNGFWEKFFFKPGNMGYPVFQTKYAKV 158 Query: 146 GILICEDIWKNSNICKHLKKQGAEFLFSLNA-----SPYYHNKLKKRHEIVTGQISHVHL 200 G+ IC D + + L GAE +++ +A S Y + H + G Sbjct: 159 GVYICYDR-HFPDGARCLGLNGAEIVYNPSATVAGLSQYLWKLEQPAHAVANGYFMGC-- 215 Query: 201 PIIYVNQVGGQDEL---IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY---DQQLSQW 254 +N+VG + F G+S+ D + Q+ + ++ ++E+ D+ S W Sbjct: 216 ----INRVGEEKPWNLGRFYGSSYFVDPRGQIIAEASENEDELLISEFDLDMIDEVRSTW 271 Query: 255 NYMSDDSAST 264 + D T Sbjct: 272 QFFRDRRPET 281 >gi|304397602|ref|ZP_07379479.1| NAD+ synthetase [Pantoea sp. aB] gi|304354774|gb|EFM19144.1| NAD+ synthetase [Pantoea sp. aB] Length = 274 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 54/283 (19%) Query: 268 PLQEEEADYNACVLSLRDYVQKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + + + V L+ Y+++++ +++G+SGG DS L +A A+ + ++ Sbjct: 15 PVIDADQEVRVSVDFLKAYLKRHSGLKTLVLGISGGQDSTLAGKLAQTAISELRQESGDN 74 Query: 324 ------IMLPYKYTS-PQSLEDAAACAK-----ALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 + LPY + Q +DA A + A+ K VL + +S F Sbjct: 75 DYTFIAVRLPYGVQADEQDCQDALAFIQPDRSLAVNIKESVLASERALKDAGITLSDF-- 132 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 V N ++R R +++ +K +++ T + +E G+ T YGD NPL Sbjct: 133 ------VRGNEKARERMKAQYSIAGMTKGVVVGTDHAAEAVTGFFTKYGDGGTDINPLFR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K Q QL LG P + K P+A+L RP D+ +L Y Sbjct: 187 LNKRQGKQLLKH---------LG-----CPEHLYLKKPTADLEDDRPGLQDEVALGVTYE 232 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 ++DD + E I+ D R +E +E+KRR Sbjct: 233 MIDDYL------EGKSIDPD------NARIIEGWYLKTEHKRR 263 >gi|121717162|ref|XP_001276027.1| nitrilase, putative [Aspergillus clavatus NRRL 1] gi|119404184|gb|EAW14601.1| nitrilase, putative [Aspergillus clavatus NRRL 1] Length = 317 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 20/161 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------PE- 54 +++A+ Q P ++ +AK R EA + G LI F E +I GYP PE Sbjct: 8 VRVAVTQAEPAWLNLQEGVAKTCRLMAEAAQNGAQLIAFPECWIPGYPGWIWTRNLDPEL 67 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRD 113 ++ + K+ ++ ID +KS D + +GF D + + V++ A G + A R Sbjct: 68 NIRYLKNSLRLDGPEIDRIKSCARDNAIAVSLGFSEYDHGSLYIAQVLIAADGTVKAHRR 127 Query: 114 KINLPNYSEFHEKRTFI---SGYSNDPIV-FRDIRLGILIC 150 K+ H +RT SG D +V R+G L C Sbjct: 128 KMK-----PTHMERTIFGDASGECFDTVVQLPFARVGNLSC 163 >gi|187732634|ref|YP_001880532.1| NAD synthetase [Shigella boydii CDC 3083-94] gi|238689504|sp|B2U3C0|NADE_SHIB3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|187429626|gb|ACD08900.1| NAD+ synthetase [Shigella boydii CDC 3083-94] Length = 275 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREADIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 L L P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ------LAAL--ACPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + + R +E+ +E+KRR Sbjct: 240 G-KNVPQQVARTIENWYLKTEHKRR 263 >gi|229489732|ref|ZP_04383589.1| hydrolase in PqqF 5'region [Rhodococcus erythropolis SK121] gi|229323242|gb|EEN89006.1| hydrolase in PqqF 5'region [Rhodococcus erythropolis SK121] Length = 281 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 31/194 (15%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 ++L E+ +GY +LV ++ A D++ + G +V G+P D V NS Sbjct: 45 ILLTPEMSATGYDIGELVSLRA-EPADGPIFDSVAAIARSAGIAVVYGYPELDGGDVYNS 103 Query: 100 VVILDAGNIIAVRDKINLPNYSE-----------FHEKRTFISGYSNDPIVFRDIRLGIL 148 V ++D RD +L +Y + F T + G+ F IR G+L Sbjct: 104 VQVVD-------RDGTSLAHYRKTHLFGTLDREHFRPGETLVVGFD-----FEGIRCGLL 151 Query: 149 ICEDIWKNSNICKHLKKQGAEFLFSLNA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 IC D+ + H G E+L +PY H ++V + + + Y N Sbjct: 152 ICYDVEFPEAVRAH-ADAGTEWLIVPTGLMTPYEHIA----QQVVPARAYESQMFVTYGN 206 Query: 207 QVGGQDELIFDGAS 220 + G + EL + G S Sbjct: 207 RCGAETELTYCGLS 220 >gi|254302926|ref|ZP_04970284.1| possible amidohydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323118|gb|EDK88368.1| possible amidohydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 274 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 43/203 (21%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------P 53 KK KIA+AQ+ +I N K EEA ++ +D+I F EL GY P Sbjct: 7 KKFKIALAQIKIEQKNIEKNCKKIFERIEEAAKENVDIICFPELATIGYTITTDELQNLP 66 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF-----PRQDQEGVLNSVVILDAGNI 108 ED F +FI+ K H I+VG+ ++ ++ + + I D G I Sbjct: 67 ED--FNNTFIEKLQEKAKLFK--IH-----ILVGYLESKTTKKSKDFYNSCIFIDDEGKI 117 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDI--WKNSNICKHL 163 +A K+ L EK F +G D + +D ++GILIC D+ ++ + I + L Sbjct: 118 LANARKVYLWK----KEKTKFKAG---DKFIVKDTKFGKIGILICYDLEFFEPARI-ECL 169 Query: 164 KKQGAEFLF-----SLNASPYYH 181 K GAE +F SLNA +H Sbjct: 170 K--GAEIIFVPSLWSLNAENRWH 190 >gi|301055532|ref|YP_003793743.1| carbon-nitrogen family hydrolase [Bacillus anthracis CI] gi|300377701|gb|ADK06605.1| hydrolase, carbon-nitrogen family [Bacillus cereus biovar anthracis str. CI] Length = 259 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 13/224 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q++ GD+ NI A+ EA ++ D+I+ EL+ +GY L + + Sbjct: 1 MKVACIQMDIFFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNY 120 ++ I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + Sbjct: 61 LETKEKLIEWSKQY----GVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G S D+ IC DI + H K GA+ LF + P Sbjct: 115 QLMGEHKYLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G F G S D Sbjct: 174 --RLAHWRLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 215 >gi|291520292|emb|CBK75513.1| N-carbamoylputrescine amidase [Butyrivibrio fibrisolvens 16/4] Length = 291 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 23/244 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK- 60 ++K+ +A Q+ ++ NI A EA +G +IL ELF Y ++ ++ Sbjct: 1 MRKITVAAIQMQ-CSTNVEENINTADLMVREAASKGAQIILLPELFERQYFCQERRYEYY 59 Query: 61 SFIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 F + + A+ + I V F +D + NSV ++DA G I+ + K ++ Sbjct: 60 DFAKPVEENDAVKHFVKLAAELSVVIPVSFYEKDGNVLYNSVAVIDADGTILGIYRKTHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ + EK F G + + + ++G+ IC D W + + +GAE LF + Sbjct: 120 PDDHFYQEKFYFTPGNTGFKVWNTKYAKIGVGICWDQW-FPETARCMAVKGAELLFYPTA 178 Query: 174 LNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQD-ELIFDGAS 220 + + P + + + G +P+I N++ GGQ+ L F G+S Sbjct: 179 IGSEPILESDSMPHWRRCMQGHAGSNLMPVIAANRIGLEEVKPCKENGGQESSLNFYGSS 238 Query: 221 FCFD 224 F D Sbjct: 239 FMTD 242 >gi|323484692|ref|ZP_08090051.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium symbiosum WAL-14163] gi|323691759|ref|ZP_08106016.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium symbiosum WAL-14673] gi|323401929|gb|EGA94268.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium symbiosum WAL-14163] gi|323504125|gb|EGB19930.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium symbiosum WAL-14673] Length = 270 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 10/175 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +K++IA+ Q+ V GD N+ K ++A Q +D+I F EL +GY E +K Sbjct: 5 RKVRIALGQMKVVQGDTKENLRKMMEMIDQAAEQNVDIICFPELAYTGYFLESEELQKLA 64 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVIL-DAGNIIAVRDKINLPN 119 + T++ G I+ G+ + NS + + D G++I K+N Sbjct: 65 EPVDGPFVQTMRKCAKSKGMHIIAGYAESVHIPGKMYNSCIFIDDNGSVIGNMRKVN--- 121 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI-WKNSNICKHLKKQGAEFLFS 173 + EK F G S I + ++G+LIC D+ + + + LK GAE +F Sbjct: 122 -AWGTEKLKFCEGDSFPVINTKFGKIGMLICYDVEFPEPSRIEALK--GAELVFC 173 >gi|82543857|ref|YP_407804.1| NAD synthetase [Shigella boydii Sb227] gi|123559775|sp|Q321N2|NADE_SHIBS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|81245268|gb|ABB65976.1| NAD synthetase [Shigella boydii Sb227] gi|320173591|gb|EFW48784.1| NAD synthetase [Shigella dysenteriae CDC 74-1112] gi|320184222|gb|EFW59037.1| NAD synthetase [Shigella flexneri CDC 796-83] gi|332096311|gb|EGJ01312.1| NH(3)-dependent NAD(+) synthetase [Shigella boydii 3594-74] Length = 275 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 L L P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ------LAAL--ACPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + + R +E+ +E+KRR Sbjct: 240 G-KNVPQQVARTIENWYLKTEHKRR 263 >gi|70726041|ref|YP_252955.1| NAD synthetase [Staphylococcus haemolyticus JCSC1435] gi|123660622|sp|Q4L7M6|NADE_STAHJ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|68446765|dbj|BAE04349.1| NAD synthetase [Staphylococcus haemolyticus JCSC1435] Length = 273 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 40/230 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPYKYTSPQ 334 ++ YVQ ++F K +++G+SGG DS L A +AV+ L E + LPY Sbjct: 31 IKSYVQSHSFIKSLVLGISGGQDSTLTGKLAQLAVEELRNEGRDCQFIAVKLPYGVQ--- 87 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRG 388 +DA AL + P + + + Q ++ +GI + Q +R R Sbjct: 88 --KDAEEVEDALNF---IHPDEIITVNIKPAVDQSVKSLNEAGIELTDFQRGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++++ +++ T + +E G+ T YGD + P+ L K Q QL + N+ Sbjct: 143 KVQFSIASNRSGIVIGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLKYLNA-- 200 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 201 ------------PKHLYEKVPTADLEDDKPQLPDEEALGVTYDQIDDYLE 238 >gi|111020519|ref|YP_703491.1| nitrilase [Rhodococcus jostii RHA1] gi|110820049|gb|ABG95333.1| probable nitrilase [Rhodococcus jostii RHA1] Length = 266 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 36/284 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ Q + D+A N++ + A G +++ E+ +GY L+ +++ + Sbjct: 1 MRAALFQGPELSFDVAANLSAIESVAQTAAASGASILVCPEMAATGYNIGSLIAERA--E 58 Query: 65 ACSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 I T ++ + G +V G+P D V NSV + D L NY + Sbjct: 59 PADGPIATRIAEIARESGIAVVYGYPEADGGVVYNSVQVFDPSG-------TPLANYRKT 111 Query: 124 H-----EKRTFISGYSNDPIVFR----DIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 H ++ F +G D +V + IR GILIC D+ + H + G ++L Sbjct: 112 HLFGELDRSHFAAG---DELVVQFDHAGIRCGILICYDVEFPEAVRAHADR-GTQWLVVP 167 Query: 175 NA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQQQLA 230 SPY +V + L + YVN+ G + +L + G+S DG +LA Sbjct: 168 TGLMSPYEFIA----ESVVPTRAYESQLFVTYVNRCGTEADLDYCGSSCAIAPDG-TELA 222 Query: 231 FQMKHFSEQNFMTEWHYD--QQLSQWNYMSDDSASTMYIPLQEE 272 +H E+ + + D + + N DD +Y LQE+ Sbjct: 223 RAGRH--EELAIVDLELDVLHRSRRGNTHLDDRRVDLYPFLQEK 264 >gi|323308824|gb|EGA62061.1| Qns1p [Saccharomyces cerevisiae FostersO] Length = 713 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 121/594 (20%), Positives = 205/594 (34%), Gaps = 129/594 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ + A +G L + EL I+GY D + Sbjct: 5 ITLATCNLNQWALDFEGNRDRILQSIKIAKERGARLRVGPELEITGYGCLDHFLENDVCL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + G + +G P + N ++ G I+ +R KI L N + Sbjct: 65 HSWEMYAQIIKNKETHGLILDIGMPVLHKNVRYNCRLLSLDGEILFIRPKIWLANDGNYR 124 Query: 125 EKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F ++G + + I D +G CE+++ + Sbjct: 125 EMRFFTPWMKPGVVEDFILPPEIQKVTGQRLVPFGDAVINSLDTCIGTETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFD- 217 + G E + + + S + KL KR +++ +Y NQ G D L +D Sbjct: 185 HIAMSLDGVEIMTNSSGSHHELRKLNKRLDLILNATKRCGGVYLYANQRGCDGDRLYYDG 244 Query: 218 -------------GASFCFDG----------QQQLAFQMKHFSE--QNFMTEWHYDQ--- 249 G+ F D ++ +++ S Q + E + + Sbjct: 245 CALIAINGTIVAQGSQFSLDDVEVVTATVDLEEVRSYRAAVMSRGLQASLAEIKFKRIDI 304 Query: 250 --QLSQWNYMSDDSAST------MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +L+ D + Y +EE A AC + DY+++ N + LSG Sbjct: 305 PVELALMTSRFDPTVCPTKVREPFYHSPEEEIALGPACWMW--DYLRRCNGTGFFLPLSG 362 Query: 302 GIDSALCAAI-------AVDALGKENVQTIMLPYKYT---------SPQSLED------- 338 GIDS A I DA N Q I K T SPQ L Sbjct: 363 GIDSCATAMIVHSMCRLVTDAAQNGNEQVIKDVRKITRSGDDWIPDSPQDLASKIFHSCF 422 Query: 339 -------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 A + A+G + L + LV+ SL ++P Sbjct: 423 MGTENSSKETRNRAKDLSNAIGSYHVDLKMDSLVSSVVSLFEVATGKKPIYKIFGGSQIE 482 Query: 376 GIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +NIQ+R+R + + + N ++L ++N E GY T Y S Sbjct: 483 NLALQNIQARLRMVLSYLFAQLLPWVRGIPNSGGLLVLGSANVDECLRGYLTKYDCSSAD 542 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + ++ + I L +P+AEL P D Sbjct: 543 INPIGGISKTDLKRFIAYASKQ--------YNMPILNDFLNATPTAELEPMTKD 588 >gi|308175995|ref|YP_003915401.1| NAD(+) synthase [Arthrobacter arilaitensis Re117] gi|307743458|emb|CBT74430.1| NAD(+) synthase [Arthrobacter arilaitensis Re117] Length = 274 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 103/259 (39%), Gaps = 40/259 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIA-------VDALGKENVQTIMLPYKYTSPQS 335 L+DY+ ++G+SGGIDS L +A +A G LP+ + Sbjct: 31 LKDYLAATGAKGFVLGISGGIDSTLAGRLAQLAVEEVREAGGNARFVAARLPHGKQRDAA 90 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 AA A ++++ I V F ++ + S N+++R R + AL+ Sbjct: 91 DAQAAMDFVAADEQFEI-NIEKPVAAFDEALADAGHKALSDFNRGNVKARARMIMQYALA 149 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 ++L T + +E G+ T +GD PL L K Q L Sbjct: 150 GDRGMLVLGTDHAAESVTGFFTKFGDGGADLLPLAGLNKRQNQAL--------------- 194 Query: 456 LTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEY 510 L E+ P + K P+A+L +P + D++ L YP +DD ++ +E Sbjct: 195 LRELRAPQQLWAKEPTADLLDGQPLRADEDELGLTYPQIDDYLE------------GREI 242 Query: 511 NDETVRYVEHLLYGSEYKR 529 + +E GS +KR Sbjct: 243 DPAAAEAIERRFTGSRHKR 261 >gi|186473591|ref|YP_001860933.1| NAD+ synthetase [Burkholderia phymatum STM815] gi|184195923|gb|ACC73887.1| NAD+ synthetase [Burkholderia phymatum STM815] Length = 288 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 38/260 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 L DY+ N ++G+SGG+DS+ A ++V+ L + + L + + ++A Sbjct: 39 LSDYLYSNGLRTYVLGISGGVDSSTAGRLAQLSVERLRAKGYEAHFLAVRLPYGEQRDEA 98 Query: 340 AACAKALGCKYDVL-------PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 A + D P +++ +Q+ + V NI++R R Sbjct: 99 DAQHAMQFIRPDEALTVNVKEPSDAMLSALKRAGAQYADDFQEDFVLGNIKARQRMIAQY 158 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A++ +++ T + +E +G+ T +GD PL L K +V +LA Sbjct: 159 AIAGARAGVVVGTDHAAESLMGFFTKFGDGGADILPLAGLTKRRVRELA---------RA 209 Query: 453 LGPLTEVIPPSILEKSPSAELR---PHQTDQESLPPYPILDDIIKRIVENEESFINNDQE 509 LG P ++ K P+A+L P + D++S Y I D I +E Q Sbjct: 210 LG-----APDHLVMKVPTADLETLTPQRPDEDS---YGIAYDDIDNFLEG--------QS 253 Query: 510 YNDETVRYVEHLLYGSEYKR 529 +DE + + + +KR Sbjct: 254 VSDEVLTTIRRFYMATRHKR 273 >gi|228992774|ref|ZP_04152700.1| Carbon-nitrogen hydrolase [Bacillus pseudomycoides DSM 12442] gi|228767106|gb|EEM15743.1| Carbon-nitrogen hydrolase [Bacillus pseudomycoides DSM 12442] Length = 281 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 19/228 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K+K+A Q++ GD+ NI A++ EA ++ D+I+ EL+ +GY DL Sbjct: 22 KMKVACIQMDIAFGDVNTNIENAKKKIGEAMQRKPDVIVLPELWTTGY---DLKRLPEIA 78 Query: 64 QACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNY 120 L S+ A +VG +Q ++GV N++ +++ G + K++L + Sbjct: 79 DEGGIQTKELLSEWAKQFAVNIVGGSVAKQTKQGVTNTMYVVNREGEVQNEYSKVHL--F 136 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDI----WKNSNICKHLKKQGAEFLFSLNA 176 E + I+G D++ G IC DI W + + GA LF + Sbjct: 137 QLMDEHKYLIAGDGTGEFTLDDVQCGGTICYDIRFPEWMRVHTVR-----GANVLFVVAE 191 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L ++ + ++ N+ G + +F G S D Sbjct: 192 WPLV--RLAHWRLLLQARAVENQCYVVACNRAGEDPDNMFAGHSLIVD 237 >gi|146293390|ref|YP_001183814.1| NAD synthetase [Shewanella putrefaciens CN-32] gi|189083412|sp|A4Y7T2|NADE_SHEPC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|145565080|gb|ABP76015.1| NH(3)-dependent NAD(+) synthetase [Shewanella putrefaciens CN-32] gi|319426693|gb|ADV54767.1| NAD+ synthetase [Shewanella putrefaciens 200] Length = 276 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 43/215 (20%) Query: 295 VIIGLSGGIDSA----LCAAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACAK 344 +++G+SGG+DS+ LC +AVD+L E + + LPY + E AC Sbjct: 40 LVLGISGGVDSSTAGRLCQ-LAVDSLNSEQANSDYQFIAVRLPY-HIQKDEHEAQLACQF 97 Query: 345 ALGCKYDVLPIHDLVNHFF-SLMSQFLQEEPS-------GIVAENIQSRIRGNILMALSN 396 K + +H V+ + ++ F++ + V N+++R+R L+ Sbjct: 98 IQPSKLVTVNVHQGVDAVHGATLAAFVEAGLTLPDAAKVDFVKGNVKARMRMIAQYELAG 157 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++ T + +E G+ T +GD + PL L K QV QLA++ + Sbjct: 158 LVGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRQLAAYLGA---------- 207 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 P S++ K+P+A+L +Q P+L+D Sbjct: 208 ----PESLVYKAPTADLEDNQ---------PLLED 229 >gi|198434567|ref|XP_002125837.1| PREDICTED: similar to predicted protein [Ciona intestinalis] Length = 701 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 55/247 (22%), Positives = 92/247 (37%), Gaps = 26/247 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M++K+ +A+ LN D +GN + +++ G L +EL +SGY ED ++ Sbjct: 1 MVRKVNLAVTSLNQWSMDFSGNCERIKQSIRRCFEMGASYRLGSELEVSGYGCEDHFYEN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +Q + L + VG P + N VI I+ +R K+ N Sbjct: 61 DTVQHSWEVLAELLAMNEAKTMICDVGMPIIHKTVRYNCRVIFLHKQIVLIRPKLVCCNE 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 F E R F I+G P I +D +G +CE+++ Sbjct: 121 GNFRELRWFVPWLKRKQIDDFVLPDFIQEITGQKTVPIGDAVIQTKDTCIGSEVCEEMFT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 G E + + S + K ++R + + + NQVG L Sbjct: 181 LETSHCLQAMDGVEIFTNGSGSHFNLRKSQRRWKFASSACLRAGGVYMLSNQVGCDGGRL 240 Query: 215 IFDGASF 221 +DGAS Sbjct: 241 YYDGASL 247 >gi|87118409|ref|ZP_01074308.1| NH(3)-dependent NAD(+) synthetase [Marinomonas sp. MED121] gi|86166043|gb|EAQ67309.1| NH(3)-dependent NAD(+) synthetase [Marinomonas sp. MED121] Length = 278 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 43/234 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKE-NVQTIMLPYKYTSPQSLED 338 +++ ++ + +++G+SGG+DS+LC IA D LG + + LPY Q+ ED Sbjct: 31 IKETLKISGMKVLVLGISGGVDSSLCGRLCQIASDQLGDDYQFIAVRLPYGV---QADED 87 Query: 339 AAACA---------KALGCKYDVLPIHD-----LVNHFFSLMSQFLQEEPSGIVAENIQS 384 A A A+ K IHD L + L ++F Q+ G N ++ Sbjct: 88 DAQLALSFIQPDTSLAINIKAGTDGIHDSVMESLESAGMPLPTEFKQDFTKG----NSKA 143 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R+R ++ ++ T + +E G+ T +GD + PL L K QV LA Sbjct: 144 RMRMIAQYEVAGMYNGLVPGTDHSAENISGFYTKHGDGACDLAPLFGLSKRQVRLLAKTL 203 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + P S+ K+P+A+L RP D+ SL Y +DD ++ Sbjct: 204 GA--------------PESVYAKAPTADLEDDRPQLLDEVSLGVTYDQIDDFLE 243 >gi|313890665|ref|ZP_07824292.1| NAD+ synthase [Streptococcus pseudoporcinus SPIN 20026] gi|313120976|gb|EFR44088.1| NAD+ synthase [Streptococcus pseudoporcinus SPIN 20026] Length = 274 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 54/267 (20%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+ K++F K +++G+SGG DS L A +A++ L G+++ Q I LPY + Sbjct: 30 LKSYLTKHSFLKTLVLGISGGQDSTLAGRLAQLAIEELREETGRKDYQFIAIRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRI 386 D A KAL + P L +N ++ SQ L E +GI NI++R Sbjct: 90 -----DEADAQKALAF---IRPDQTLTINIKEAVDSQVLALEAAGIKISDFNKGNIKARQ 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R A++ ++ T + +E G+ T +GD PL L K R Sbjct: 142 RMISQYAVAGQLNGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQG 192 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEES 502 + LG S+ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 193 RALLRELGA-----SASLYEKIPTADLEENKPGIADEVALGVTYKDIDDYLE-------- 239 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKR 529 +E +D+ +E+ Y +KR Sbjct: 240 ----GKEISDQAKEKIENWWYKGLHKR 262 >gi|24112861|ref|NP_707371.1| NAD synthetase [Shigella flexneri 2a str. 301] gi|30062993|ref|NP_837164.1| NAD synthetase [Shigella flexneri 2a str. 2457T] gi|110805452|ref|YP_688972.1| NAD synthetase [Shigella flexneri 5 str. 8401] gi|46396373|sp|Q83RG5|NADE_SHIFL RecName: Full=NH(3)-dependent NAD(+) synthetase gi|122366575|sp|Q0T4U8|NADE_SHIF8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|24051802|gb|AAN43078.1| NAD synthetase [Shigella flexneri 2a str. 301] gi|30041242|gb|AAP16971.1| NAD synthetase [Shigella flexneri 2a str. 2457T] gi|110615000|gb|ABF03667.1| NAD synthetase [Shigella flexneri 5 str. 8401] gi|281600897|gb|ADA73881.1| NH(3)-dependent NAD(+) synthetase [Shigella flexneri 2002017] gi|313649235|gb|EFS13669.1| NAD synthetase [Shigella flexneri 2a str. 2457T] gi|332758599|gb|EGJ88918.1| NH(3)-dependent NAD(+) synthetase [Shigella flexneri 2747-71] gi|332759198|gb|EGJ89507.1| NH(3)-dependent NAD(+) synthetase [Shigella flexneri K-671] gi|332762517|gb|EGJ92782.1| NH(3)-dependent NAD(+) synthetase [Shigella flexneri 4343-70] gi|333004257|gb|EGK23788.1| NH(3)-dependent NAD(+) synthetase [Shigella flexneri K-218] gi|333018302|gb|EGK37601.1| NH(3)-dependent NAD(+) synthetase [Shigella flexneri K-304] Length = 275 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ------TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L +E + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETRNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LTALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNLPEQVARTIENWYLKTEHKRR 263 >gi|134299405|ref|YP_001112901.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfotomaculum reducens MI-1] gi|134052105|gb|ABO50076.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfotomaculum reducens MI-1] Length = 273 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 22/248 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L I + Q++ V+GD+A N+AKA +A G +I EL +GY P DL+ K Sbjct: 1 MKRPLTIGLIQMDCVLGDVAANVAKAIERIRQAAAMGAQIICLPELCTTGYRP-DLLEDK 59 Query: 61 SFIQACSSAIDTLKSDTHDGGA---GIVVGFPRQDQEGVL----NSVVILDA-GNIIAVR 112 + + + +D A GI + P ++ V NS V +D G + V Sbjct: 60 --LWELTEPVPGPTTDVFSQLAKELGIYIILPMNEKGAVPGMIHNSAVFIDKDGEVQGVF 117 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL 171 K + + +R + + ++ P+ + ++G++IC D+ + + L +GAE + Sbjct: 118 RKAH-----AYATERYYFTDGNHYPVFQTEFGKVGVMICYDM-GFPEVARILTLKGAEVI 171 Query: 172 FSLNASPYYHNKLKKRHEI-VTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 F+ +A + + + +I + + L + VN+VG + +++ G S + + + Sbjct: 172 FAPSA---WRQEDEDIWDINIAARALENRLFVAAVNRVGREGDVVMHGKSKIANTRGKTL 228 Query: 231 FQMKHFSE 238 + F E Sbjct: 229 AEAARFEE 236 >gi|329894066|ref|ZP_08270051.1| N-carbamoylputrescine amidase [gamma proteobacterium IMCC3088] gi|328923238|gb|EGG30558.1| N-carbamoylputrescine amidase [gamma proteobacterium IMCC3088] Length = 295 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 65/282 (23%), Positives = 112/282 (39%), Gaps = 25/282 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF 58 M +++ + + Q + GD AG++A + + A QG +LIL EL Y ED Sbjct: 1 MSREITVGVVQ-HANTGDYAGDVATSVQGIRRAVAQGANLILLQELHAGLYFCQVEDTNN 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 + DT + + IV + G+ N+ V+L+ G++ K++ Sbjct: 60 FDLAETIPGPSTDTFGALAAELNVVIVCSLFEKRATGLYHNTAVVLETDGSVAGCYRKMH 119 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ ++EK F G PI +LG+L+C D W + + GAE L Sbjct: 120 IPDDPGYYEKFYFTPGDLGFTPIQTSVGKLGVLVCWDQWY-PEAARLMALAGAEMLLYPT 178 Query: 173 --SLNASPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDELI-------FDGAS 220 N + ++R + Q H +LP++ N++G + + F G+S Sbjct: 179 AIGWNPDDPTDEQARQREAWIAVQRGHAVANNLPVLSANRIGFEGDPSGQTAGSQFWGSS 238 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSD 259 Q +L Q S + D Q W Y+ D Sbjct: 239 MVVGWQGELLAQADTESATELVVTLDLDRTEQVRRWWPYLRD 280 >gi|209768640|gb|ACI82632.1| NAD synthetase [Escherichia coli] Length = 275 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQTIMLPYKYTSPQ 334 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q I + Y Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRQPYGVQA 89 Query: 335 SLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRIRG 388 +D C A+ + P L VN ++++ Q L+E E S V N ++R R Sbjct: 90 DEQD---CQDAIAF---IQPDRVLTVNIKGAVLASEQALREACIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + + R +E+ +E+KRR Sbjct: 241 KNVPQQVARTIENWYLKTEHKRR 263 >gi|40890175|gb|AAR97432.1| nitrilase [uncultured organism] Length = 340 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 18/171 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------- 52 M K++ A QL+PV+ G +K EA QG +L++F E + YP Sbjct: 1 MPAKVRAAAVQLSPVLFSREGTTSKVCDKIAEAAAQGAELVVFPETVVPYYPYFSFIKAP 60 Query: 53 ----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 E L+ + + +++ + GA + +G +D + N+ ++ DA G Sbjct: 61 AVIGAEHLLLLEQAVTVPGPSVEAIAEAARKAGAVVSIGVNERDHGTLYNTQLLFDADGR 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 + R KI P Y HE+ + G + +V D R+G + W++ N Sbjct: 121 LAQARRKIT-PTY---HERMIWGQGDGSG-LVAVDTRVGRIGSLACWEHYN 166 >gi|300765099|ref|ZP_07075086.1| carbon-nitrogen family hydrolase [Listeria monocytogenes FSL N1-017] gi|300514224|gb|EFK41284.1| carbon-nitrogen family hydrolase [Listeria monocytogenes FSL N1-017] Length = 296 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 29/269 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MNTIKIALIQRKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I S+ + TLK + GI + + ++ N+ +I+D Sbjct: 61 PLATDFDNERTKWLNEAITEDSAYVLTLKELAKELKIGICATYLSKTEQKPQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +GAE + NA +P N+L R E + G ++ + P + ++FD Sbjct: 177 LKGAEIILVPNACDINPARLNQLNSRAFENMVG-VAMANYPGEKWGRSTAFSPIVFDENG 235 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D + + + SE F+ E++ D+ Sbjct: 236 ---DYRDNTIIETEDVSEGIFIAEFNLDE 261 >gi|146299552|ref|YP_001194143.1| NAD+ synthetase [Flavobacterium johnsoniae UW101] gi|146153970|gb|ABQ04824.1| NAD+ synthetase [Flavobacterium johnsoniae UW101] Length = 268 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 58/225 (25%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDAL---------------GKENVQT 323 L++Y + +IG+SGG+DSA LCA + L G+E+++ Sbjct: 20 LKNYAANAKVNGFVIGISGGVDSAVTSTLCAQTGLQVLCVEMPIHQAESQVSRGREHIE- 78 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---AE 380 L ++ + S+E DL + F + S + S V Sbjct: 79 -QLKKRFPNVSSVE------------------TDLTSTFEAFKSSVPTSKDSTKVNLSLA 119 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N ++RIR L L+ + ++ T NK E VG+ T YGD +P+ DL K+ V+ Sbjct: 120 NTRARIRMTSLYYLAGINGLLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSDVYA 179 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL-RPHQTDQESL 483 L + IP SIL +P+ L ++TD++ L Sbjct: 180 LGEFLE--------------IPKSILTAAPTDGLFGDNRTDEDQL 210 >gi|16129694|ref|NP_416254.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli str. K-12 substr. MG1655] gi|89108579|ref|AP_002359.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli str. K-12 substr. W3110] gi|157161200|ref|YP_001458518.1| NAD synthetase [Escherichia coli HS] gi|170019913|ref|YP_001724867.1| NAD synthetase [Escherichia coli ATCC 8739] gi|170081397|ref|YP_001730717.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli str. K-12 substr. DH10B] gi|188494499|ref|ZP_03001769.1| NAD+ synthetase [Escherichia coli 53638] gi|238900954|ref|YP_002926750.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli BW2952] gi|256022597|ref|ZP_05436462.1| NAD synthetase [Escherichia sp. 4_1_40B] gi|300951343|ref|ZP_07165186.1| NAD+ synthetase [Escherichia coli MS 116-1] gi|300958633|ref|ZP_07170757.1| NAD+ synthetase [Escherichia coli MS 175-1] gi|301025327|ref|ZP_07188890.1| NAD+ synthetase [Escherichia coli MS 196-1] gi|301647934|ref|ZP_07247710.1| NAD+ synthetase [Escherichia coli MS 146-1] gi|307138398|ref|ZP_07497754.1| NAD synthetase [Escherichia coli H736] gi|312969768|ref|ZP_07783951.1| NAD+ synthetase [Escherichia coli 1827-70] gi|331642340|ref|ZP_08343475.1| NAD+ synthetase [Escherichia coli H736] gi|2507074|sp|P18843|NADE_ECOLI RecName: Full=NH(3)-dependent NAD(+) synthetase; AltName: Full=Nicotinamide adenine dinucleotide synthetase; Short=NADS; AltName: Full=Nitrogen regulatory protein gi|189030444|sp|A8A0T1|NADE_ECOHS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030446|sp|B1IPJ0|NADE_ECOLC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|229485728|sp|B1XGK1|NADE_ECODH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|259511193|sp|C4ZZ96|NADE_ECOBW RecName: Full=NH(3)-dependent NAD(+) synthetase gi|61680276|pdb|1WXE|A Chain A, E.Coli Nad Synthetase, Amp gi|61680277|pdb|1WXF|A Chain A, E.Coli Nad Synthetase gi|61680278|pdb|1WXG|A Chain A, E.Coli Nad Synthetase, Dnd gi|61680279|pdb|1WXH|A Chain A, E.Coli Nad Synthetase, Nad gi|61680280|pdb|1WXI|A Chain A, E.Coli Nad Synthetase, Amp.Pp gi|1742846|dbj|BAA15529.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli str. K12 substr. W3110] gi|1788036|gb|AAC74810.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli str. K-12 substr. MG1655] gi|157066880|gb|ABV06135.1| NAD+ synthetase [Escherichia coli HS] gi|169754841|gb|ACA77540.1| NAD+ synthetase [Escherichia coli ATCC 8739] gi|169889232|gb|ACB02939.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli str. K-12 substr. DH10B] gi|188489698|gb|EDU64801.1| NAD+ synthetase [Escherichia coli 53638] gi|238861860|gb|ACR63858.1| NAD synthetase, NH3/glutamine-dependent [Escherichia coli BW2952] gi|260449138|gb|ACX39560.1| NAD+ synthetase [Escherichia coli DH1] gi|299880125|gb|EFI88336.1| NAD+ synthetase [Escherichia coli MS 196-1] gi|300314684|gb|EFJ64468.1| NAD+ synthetase [Escherichia coli MS 175-1] gi|300449406|gb|EFK13026.1| NAD+ synthetase [Escherichia coli MS 116-1] gi|301073957|gb|EFK88763.1| NAD+ synthetase [Escherichia coli MS 146-1] gi|310338053|gb|EFQ03142.1| NAD+ synthetase [Escherichia coli 1827-70] gi|315136381|dbj|BAJ43540.1| NAD synthetase [Escherichia coli DH1] gi|323936997|gb|EGB33277.1| NAD synthase [Escherichia coli E1520] gi|323940595|gb|EGB36786.1| NAD synthase [Escherichia coli E482] gi|331039138|gb|EGI11358.1| NAD+ synthetase [Escherichia coli H736] gi|332343460|gb|AEE56794.1| Nicotinamide adenine dinucleotide synthetase NadE [Escherichia coli UMNK88] Length = 275 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 L L P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ----LAAL--ACPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + + R +E+ +E+KRR Sbjct: 241 KNVPQQVARTIENWYLKTEHKRR 263 >gi|302206799|gb|ADL11141.1| NH(3)-dependent NAD(+) synthetase [Corynebacterium pseudotuberculosis C231] gi|308277045|gb|ADO26944.1| NH(3)-dependent NAD(+) synthetase [Corynebacterium pseudotuberculosis I19] Length = 276 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 46/263 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKEN----VQTIMLPYKYTSPQS 335 L Y+ + +G+SGG DS L A +AV+ L KE I LPY Q+ Sbjct: 31 LAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGV---QA 87 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM--- 392 E+ A A A + P H + + + + E + +GN+ + Sbjct: 88 DEEDARIALAF-----IRPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKVRQR 142 Query: 393 -----ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 AL+ +++ T + +E G+ T +GD + PL L K Q QL N+ Sbjct: 143 MIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNA- 201 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE-ESFINN 506 P S K P+A+L +E P P D++ + ++ +++I Sbjct: 202 -------------PDSTWLKVPTADL------EEERPALP--DEVALGVTYSDIDTYIEG 240 Query: 507 DQEYNDETVRYVEHLLYGSEYKR 529 E +++ +EHL E+KR Sbjct: 241 SGEVSEKAAARIEHLWKIGEHKR 263 >gi|238897810|ref|YP_002923489.1| N-carbamoylputrescine amidohydrolase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465567|gb|ACQ67341.1| N-carbamoylputrescine amidohydrolase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 295 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 21/250 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 + ++K+A Q++ ++ NI KA + +A+ QG +IL ELF + Y P Sbjct: 1 MTQVKVAATQMS-CSWNLPKNIEKAEKLIRKAHAQGAQIILIQELFATPYFCIDQNPAHY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 ++ S I + + + + F NS+V+++A G ++ + K Sbjct: 60 SLAENV--ESSVLIKYFSALAAELAVVLPLSFFESAHNVYYNSLVVINADGTVLNLYRKT 117 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIW-KNSNICKHLKKQGAEFLF- 172 ++PN + EK F G + + ++G+ IC D W + C LK GAE +F Sbjct: 118 HIPNGPGYQEKHFFTPGDTGFQVWDTSYAKIGVGICWDQWFPETARCLALK--GAEIIFY 175 Query: 173 --SLNASPYYHNKLKKRHE--IVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 ++ + P + + H + G + +PI+ N++G + +G F G Sbjct: 176 PTAIGSEPNFPEINSQPHWTFVQQGHAAANMVPIVVSNRIGKELSRYVEGLEITFYGS-- 233 Query: 229 LAFQMKHFSE 238 +F H E Sbjct: 234 -SFITNHIGE 242 >gi|190405856|gb|EDV09123.1| glutamine-dependent NAD synthetase [Saccharomyces cerevisiae RM11-1a] Length = 714 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 121/594 (20%), Positives = 205/594 (34%), Gaps = 129/594 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ + A +G L + EL I+GY D + Sbjct: 5 ITLATCNLNQWALDFEGNRDRILQSIKIAKERGARLRVGPELEITGYGCLDHFLENDVCL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + G + +G P + N ++ G I+ +R KI L N + Sbjct: 65 HSWEMYAQIIKNKETHGLILDIGMPVLHKNVRYNCRLLSLDGEILFIRPKIWLANDGNYR 124 Query: 125 EKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F ++G + + I D +G CE+++ + Sbjct: 125 EMRFFTPWMKPGVVEDFILPPEIQKVTGQRLVPFGDAVINSLDTCIGTETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFD- 217 + G E + + + S + KL KR +++ +Y NQ G D L +D Sbjct: 185 HIAMSLDGVEIMTNSSGSHHELRKLNKRLDLILNATKRCGGVYLYANQRGCDGDRLYYDG 244 Query: 218 -------------GASFCFDG----------QQQLAFQMKHFSE--QNFMTEWHYDQ--- 249 G+ F D ++ +++ S Q + E + + Sbjct: 245 CALIAINGTIVAQGSQFSLDDVEVVTATVDLEEVRSYRAAVMSRGLQASLAEIKFKRIDI 304 Query: 250 --QLSQWNYMSDDSAST------MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +L+ D + Y +EE A AC + DY+++ N + LSG Sbjct: 305 PVELALMTSRFDPTVCPTKVREPFYHSPEEEIALGPACWM--WDYLRRCNGTGFFLPLSG 362 Query: 302 GIDSALCAAI-------AVDALGKENVQTIMLPYKYT---------SPQSLED------- 338 GIDS A I DA N Q I K T SPQ L Sbjct: 363 GIDSCATAMIVHSMCRLVTDAAQNGNEQVIKDVRKITRSGDDWIPDSPQDLASKIFHSCF 422 Query: 339 -------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 A + A+G + L + LV+ SL ++P Sbjct: 423 MGTENSSKETRNRAKDLSNAIGSYHVDLKMDSLVSSVVSLFEVATGKKPIYKIFGGSQIE 482 Query: 376 GIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +NIQ+R+R + + + N ++L ++N E GY T Y S Sbjct: 483 NLALQNIQARLRMVLSYLFAQLLPWVRGIPNSGGLLVLGSANVDECLRGYLTKYDCSSAD 542 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + ++ + I L +P+AEL P D Sbjct: 543 INPIGGISKTDLKRFIAYASKQ--------YNMPILNDFLNATPTAELEPMTKD 588 >gi|6321865|ref|NP_011941.1| Qns1p [Saccharomyces cerevisiae S288c] gi|731675|sp|P38795|NADE_YEAST RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|500832|gb|AAB68889.1| Yhr074wp [Saccharomyces cerevisiae] gi|151944019|gb|EDN62312.1| glutamine-dependent NAD synthetase [Saccharomyces cerevisiae YJM789] gi|207344678|gb|EDZ71741.1| YHR074Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|285809981|tpg|DAA06768.1| TPA: Qns1p [Saccharomyces cerevisiae S288c] gi|323333241|gb|EGA74639.1| Qns1p [Saccharomyces cerevisiae AWRI796] Length = 714 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 121/594 (20%), Positives = 205/594 (34%), Gaps = 129/594 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ + A +G L + EL I+GY D + Sbjct: 5 ITLATCNLNQWALDFEGNRDRILQSIKIAKERGARLRVGPELEITGYGCLDHFLENDVCL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + G + +G P + N ++ G I+ +R KI L N + Sbjct: 65 HSWEMYAQIIKNKETHGLILDIGMPVLHKNVRYNCRLLSLDGEILFIRPKIWLANDGNYR 124 Query: 125 EKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F ++G + + I D +G CE+++ + Sbjct: 125 EMRFFTPWMKPGVVEDFILPPEIQKVTGQRLVPFGDAVINSLDTCIGTETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFD- 217 + G E + + + S + KL KR +++ +Y NQ G D L +D Sbjct: 185 HIAMSLDGVEIMTNSSGSHHELRKLNKRLDLILNATKRCGGVYLYANQRGCDGDRLYYDG 244 Query: 218 -------------GASFCFDG----------QQQLAFQMKHFSE--QNFMTEWHYDQ--- 249 G+ F D ++ +++ S Q + E + + Sbjct: 245 CALIAINGTIVAQGSQFSLDDVEVVTATVDLEEVRSYRAAVMSRGLQASLAEIKFKRIDI 304 Query: 250 --QLSQWNYMSDDSAST------MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +L+ D + Y +EE A AC + DY+++ N + LSG Sbjct: 305 PVELALMTSRFDPTVCPTKVREPFYHSPEEEIALGPACWMW--DYLRRCNGTGFFLPLSG 362 Query: 302 GIDSALCAAI-------AVDALGKENVQTIMLPYKYT---------SPQSLED------- 338 GIDS A I DA N Q I K T SPQ L Sbjct: 363 GIDSCATAMIVHSMCRLVTDAAQNGNEQVIKDVRKITRSGDDWIPDSPQDLASKIFHSCF 422 Query: 339 -------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 A + A+G + L + LV+ SL ++P Sbjct: 423 MGTENSSKETRNRAKDLSNAIGSYHVDLKMDSLVSSVVSLFEVATGKKPIYKIFGGSQIE 482 Query: 376 GIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +NIQ+R+R + + + N ++L ++N E GY T Y S Sbjct: 483 NLALQNIQARLRMVLSYLFAQLLPWVRGIPNSGGLLVLGSANVDECLRGYLTKYDCSSAD 542 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + ++ + I L +P+AEL P D Sbjct: 543 INPIGGISKTDLKRFIAYASKQ--------YNMPILNDFLNATPTAELEPMTKD 588 >gi|261885515|ref|ZP_06009554.1| carbon-nitrogen family hydrolase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 289 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 20/246 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED-LVFKKSFI 63 +K+A+ + G+ I + + EEA +G +LI+ EL Y +D V Sbjct: 1 MKVALVA-HRFYGNKPDTIKRTAKLIEEAANKGAELIVLEELHQGSYFCQDESVDSFELA 59 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKINLPNYS 121 S I H+ +V + G+ + SVV + G I K+++P+ Sbjct: 60 NDFESDIAYWAEVAHEFKIVLVTSLFEKRSAGLYHNTSVVFDNDGRIAGKYRKMHIPDDP 119 Query: 122 EFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F+EK F G +PI RLG+L+C D W + + +GA+ L A ++ Sbjct: 120 NFYEKFYFAPGDLGFEPIDTSIGRLGVLVCWDQWY-PEAARLMALKGAQILIYPTAIGWF 178 Query: 181 HN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQDELIFDGASFCFDGQ 226 K ++ V Q H LP++ VN+VG G + F G SF F Q Sbjct: 179 DGDSEDEKSRQLEAWVAVQRGHSVANGLPVVTVNRVGFEAAPDGNGGIRFWGNSFVFGPQ 238 Query: 227 QQLAFQ 232 + F+ Sbjct: 239 GEELFR 244 >gi|91780231|ref|YP_555438.1| NAD synthetase [Burkholderia xenovorans LB400] gi|91692891|gb|ABE36088.1| NH(3)-dependent NAD(+) synthetase [Burkholderia xenovorans LB400] Length = 284 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 22/223 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYK--YTSPQSLE 337 L DY+ ++G+SGG+DS+ A +AVD L + L + Y S + E Sbjct: 39 LGDYLASQGLRTYVLGISGGVDSSTAGRLAQLAVDRLRARGYEAKFLAVRLPYGSQRDEE 98 Query: 338 DAAACAKALGCKYDVL-----PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 DAA + + + P ++ +Q++ + V NI++R R Sbjct: 99 DAALALEFIRPDETLTVNIKEPSDAMLQSLKRGGAQYVDDFQEDFVLGNIKARQRMVAQY 158 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A++ +++ T + +E +G+ T YGD PL L K +V LA + G + Sbjct: 159 AIAGARVGVVIGTDHAAESLMGFFTKYGDGGADILPLSGLTKRRVRALA---RALGASE- 214 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 L +P + LE L P + D++S Y +DD ++ Sbjct: 215 --RLANKVPTADLES-----LTPQKPDEDSYGISYEDIDDFLE 250 >gi|242310622|ref|ZP_04809777.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239523020|gb|EEQ62886.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 293 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 29/251 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF- 58 ++ +K+A+ Q G A + + + +EA + G +L+L EL + Y E++ F Sbjct: 1 MQPIKVALIQ-QAFKGTKAATMQASAKMIKEAAQNGANLVLLQELHTTEYFCQSENVDFF 59 Query: 59 --KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDK 114 SF + C + K++ +V + G+ N+ V+ + G I K Sbjct: 60 DYALSFQKDCEYFSEIAKNNN----IVLVTSLFEKRTSGLYHNTAVVFEKNGEIAGKYRK 115 Query: 115 INLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +++P+ F+EK F G PI +LGIL+C D W + + +GAE L Sbjct: 116 MHIPDDPGFYEKFYFTPGDLDFTPIQTSLGKLGILVCWDQW-YPEAARIMALRGAEILIY 174 Query: 174 LNASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDG 218 A ++ K ++R + Q H +P++ +N+VG + + + F G Sbjct: 175 PTAIGWFDEDSKDEKERQREAWIAIQRGHAIANGIPVVAINRVGFEKDSSEVLAGIRFWG 234 Query: 219 ASFCFDGQQQL 229 +SF F Q ++ Sbjct: 235 SSFAFGAQGEI 245 >gi|254853789|ref|ZP_05243137.1| hydrolase [Listeria monocytogenes FSL R2-503] gi|258607171|gb|EEW19779.1| hydrolase [Listeria monocytogenes FSL R2-503] Length = 301 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 29/269 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MNTIKIALIQRKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I S+ + TLK + GI + + ++ N+ +I+D Sbjct: 61 PLATDFDNERTKWLNEAITEDSAYVLTLKELAKELKIGICATYLSKTEQKPQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +GAE + NA +P N+L R E + G ++ + P + ++FD Sbjct: 177 LKGAEIILVPNACDINPARLNQLNSRAFENMVG-VAMANYPGEKWGRSTAFSPIVFDENG 235 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D + + + SE F+ E++ D+ Sbjct: 236 ---DYRDNTIIETEDVSEGIFIAEFNLDE 261 >gi|185535433|gb|ACC77862.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus xylosus] Length = 273 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 42/259 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNF-HKVIIGLSGGIDSALCAAI---AVDALGKE---- 319 P E + + + ++ YVQ ++F +++G+SGG DS L + AV+ L +E Sbjct: 16 PEIESKVETKQIIHFIKSYVQSHSFVQALVLGISGGQDSTLAGKLCQMAVEELREEGNLF 75 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIV 378 + LPY +DA+ AL + P + + Q +Q + +GI Sbjct: 76 EFIAVKLPYG-----EQKDASEVEDALTY---IQPDEIKTINIKPAVDQSVQSLKDAGIT 127 Query: 379 AENIQ-----SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + Q +R R + +++++ K +++ T + +E G+ T YGD + PL L Sbjct: 128 LTDFQKGNEKARERMKVQFSIASNKKGIVVGTDHSAENITGFYTKYGDGAADIAPLFGLN 187 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P + EK P+A+L +P D+E+L Y + Sbjct: 188 KRQGKQLLKY---------LGA-----PKHLYEKVPTADLEEDKPQLPDEEALGVSYNDI 233 Query: 490 DDII--KRIVENEESFINN 506 DD + K + + ++ I N Sbjct: 234 DDYLEGKSVPSDAKTTIEN 252 >gi|310777883|ref|YP_003966216.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ilyobacter polytropus DSM 2926] gi|309747206|gb|ADO81868.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ilyobacter polytropus DSM 2926] Length = 262 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 16/226 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI- 63 ++++ Q++ D N KA + A +Q D I+ E + +G+ PE V SF Sbjct: 1 MRVSAVQMDMKFEDPEKNYEKAEQLIRMAAKQKPDTIVLPETWNTGFFPEKNV--SSFSD 58 Query: 64 QACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYS 121 + I+ + + + I+ G + QEG+ N+ I D G IA DK +L +S Sbjct: 59 KGGQRTIELFSALSKELDVNIIAGSVVNEKQEGMYNTTYIFDRKGKCIAEYDKTHL--FS 116 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-- 179 +E F G ++ G++IC DI + + + L QG + LF + P Sbjct: 117 YMNEDEHFKKGEKLTTFELDGVKCGVIICYDI-RFLELIRTLTLQGIKILFVVAQWPVPR 175 Query: 180 -YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 H ++ + + QI + VN G E I+ G S D Sbjct: 176 IKHWEILNQARAIENQIF-----VACVNSCGTAGETIYGGHSALID 216 >gi|237755778|ref|ZP_04584381.1| N-carbamoylputrescine amidase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692066|gb|EEP61071.1| N-carbamoylputrescine amidase [Sulfurihydrogenibium yellowstonense SS-5] Length = 295 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 113/272 (41%), Gaps = 39/272 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + K+ + + Q+ D+ N K ++ + G ++I ELF S Y ED + Sbjct: 1 MDKVNVGLIQMK-CSDDLEENFEKTLEKIKDLAKSGANIICTQELFKSKYFCQVEDWSYF 59 Query: 60 K--SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKI 115 K I S I TL++ D I+ + EG+ N+ V++DA G+ + K+ Sbjct: 60 KLAEEINENSKTIKTLQTTAKDLKVVIIASLFEKRTEGIYHNTAVVIDADGSYLGKYRKM 119 Query: 116 NLPNYSEFHEKRTFIS---GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 ++P+ F+EK F GY + DI G+LIC D W + GA+ LF Sbjct: 120 HIPDDPHFYEKFYFTPGDLGYKTFKTKYADI--GVLICWDQW-YPEAARLTALSGAKILF 176 Query: 173 SLNASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVG------GQD 212 A + ++ +++ H + G ++ VN+VG G + Sbjct: 177 YPTAIGWLPSEKEEFGNSQYNAWETIQRSHAVANG------CYVMAVNRVGYEKSPDGNE 230 Query: 213 ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + F G SF + +L + E+N + E Sbjct: 231 GIEFWGQSFVSNPYGELLVKGSVDKEENIICE 262 >gi|153004115|ref|YP_001378440.1| NAD synthetase [Anaeromyxobacter sp. Fw109-5] gi|152027688|gb|ABS25456.1| NAD+ synthetase [Anaeromyxobacter sp. Fw109-5] Length = 324 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 49/214 (22%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL----------------ED 338 ++G+SGGIDS++ A + ALG + V +++P + +S +L ED Sbjct: 35 AVVGMSGGIDSSVVATLCTRALGADRVLGLLMPERDSSSDALRLGRSLADHLGIRHLVED 94 Query: 339 AAACAKALGCK-------YDVLPIH----------------DLVNHFFSLMSQFLQEEPS 375 LGC V+P + D +N ++ L E S Sbjct: 95 VGPALAGLGCYERQLEAIRSVVPEYGEGWRCKLTLPSLLAGDRLNVTLLTVADPLGRERS 154 Query: 376 G----------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + A N + R R + ++ + T N+ E G+ GD + Sbjct: 155 SRMSAAAYLQLVAATNFKQRARKMMEYYHADRLNFAVAGTPNRLEYDQGFFVKQGDGAAD 214 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 F P+ LYKTQV+ LA G P T+ Sbjct: 215 FKPIAHLYKTQVYALAEHLGVPGEIRARPPTTDT 248 >gi|194438578|ref|ZP_03070667.1| NAD+ synthetase [Escherichia coli 101-1] gi|253773306|ref|YP_003036137.1| NAD synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161799|ref|YP_003044907.1| NAD synthetase [Escherichia coli B str. REL606] gi|297516271|ref|ZP_06934657.1| NAD synthetase [Escherichia coli OP50] gi|300930782|ref|ZP_07146154.1| NAD+ synthetase [Escherichia coli MS 187-1] gi|194422588|gb|EDX38586.1| NAD+ synthetase [Escherichia coli 101-1] gi|242377461|emb|CAQ32214.1| NAD synthetase, NH[3]-dependent [Escherichia coli BL21(DE3)] gi|253324350|gb|ACT28952.1| NAD+ synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973700|gb|ACT39371.1| NAD synthetase [Escherichia coli B str. REL606] gi|253977894|gb|ACT43564.1| NAD synthetase [Escherichia coli BL21(DE3)] gi|300461340|gb|EFK24833.1| NAD+ synthetase [Escherichia coli MS 187-1] gi|323962050|gb|EGB57647.1| NAD synthase [Escherichia coli H489] gi|323974017|gb|EGB69188.1| NAD synthase [Escherichia coli TA007] Length = 275 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLRTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + + R +E+ +E+KRR Sbjct: 240 G-KNVPQQVARTIENWYLKTEHKRR 263 >gi|163751521|ref|ZP_02158744.1| NAD synthetase [Shewanella benthica KT99] gi|161328642|gb|EDP99792.1| NAD synthetase [Shewanella benthica KT99] Length = 276 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 49/243 (20%) Query: 287 VQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQTI------MLPYKYTSPQSLE 337 +++++ +++G+SGG+DS+L +AVD L E ++ LPY Q E Sbjct: 32 LKESHCQSLVLGISGGVDSSLAGRLCQLAVDELNHEAENSVYQFIAVRLPYNI---QQDE 88 Query: 338 DAA--AC-----AKALGCKYD--VLPIHDLVNHFFSLMSQFLQ---EEPSGIVAENIQSR 385 D A AC +K + D V+ IH N L + ++ E V N+++R Sbjct: 89 DEAQLACQFISPSKQVTVNIDEGVVGIH--TNTLAGLEAAGIELSDESKVDFVKGNVKAR 146 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R ++ + +++ T + +E G+ T +GD + PL L K QV +LA++ Sbjct: 147 MRMVAQYEIAGLTGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRKLAAFLG 206 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK-----RI 496 + P ++ K+P+A+L +P D+ +L Y +DD ++ RI Sbjct: 207 A--------------PEILVNKAPTADLEDDKPQLEDEVALGLSYDQIDDFLEGKSVDRI 252 Query: 497 VEN 499 V++ Sbjct: 253 VDD 255 >gi|298505145|gb|ADI83868.1| N-carbamoylputrescine amidohydrolase [Geobacter sulfurreducens KN400] Length = 294 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 22/263 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + KL +A+ Q + D N+AK+ +A+ G L++ EL Y ED Sbjct: 1 MSKLSVALVQQS-CTADKDLNLAKSIENIRKASVLGAKLVVLQELHTGPYFCQNEDTAHF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINL 117 + L + G +V + G+ N+ V+ + G++ K+++ Sbjct: 60 DLAEPIPGPTTELLGGVAKEFGVVLVSSLFERRAPGLYHNTAVVFEKDGSMAGTYRKMHI 119 Query: 118 PNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---S 173 P+ ++EK F G +PI +LG+L+C D W + + GA+ L + Sbjct: 120 PDDPGYYEKFYFTPGDLGFEPIRTSVGKLGVLVCWDQW-YPEAARLMALAGADLLIYPTA 178 Query: 174 LNASPYYHN--KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDELI-------FDGASF 221 + P H+ K++++ +T Q SH +P++ VN+VG + + F G+SF Sbjct: 179 IGWDPRDHDEEKIRQKEAWITIQRSHAVANGIPVVSVNRVGHESDPSGVLPGSQFWGSSF 238 Query: 222 CFDGQQQLAFQMKHFSEQNFMTE 244 Q ++ Q + E+ +TE Sbjct: 239 VAGPQGEILAQASNDGEELLITE 261 >gi|163752994|ref|ZP_02160118.1| putative NH(3)-dependent NAD synthetase [Kordia algicida OT-1] gi|161326726|gb|EDP98051.1| putative NH(3)-dependent NAD synthetase [Kordia algicida OT-1] Length = 262 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 37/204 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L+DY + ++G+SGGIDSA LCA + L I +P + + + Sbjct: 14 LKDYATNAKVNGFVVGVSGGIDSAVTSTLCAKTGLPTL------CIEMPI-HQAKSHVTR 66 Query: 339 AAACAKALGCKY--------DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A K L ++ D+ P+ + F + +S ++ + N ++R+R Sbjct: 67 AQEHIKQLKERFENVTDVRADLTPVFE---EFKTEVSLEGEQATVDMALANTRARLRMTT 123 Query: 391 LMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 L + ++ T NK E VG+ T YGD +P+ DL K++V+ Sbjct: 124 LYYYAGLLGRLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVY----------- 172 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL 473 LG + +V P SI+E PS L Sbjct: 173 --ALGKVLKV-PTSIMEAKPSDGL 193 >gi|238023879|ref|YP_002908111.1| NAD synthetase [Burkholderia glumae BGR1] gi|237878544|gb|ACR30876.1| NAD+ synthetase [Burkholderia glumae BGR1] Length = 287 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 22/223 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSLE 337 L DY++ ++G+SGG+DS+ A +AV+ L + + I + Y + E Sbjct: 36 LADYLRSTGLATYVLGISGGVDSSTAGRLAQLAVERLRASGYDARFIAVRLPYGVQRDEE 95 Query: 338 DA----AACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 DA A A DV P D ++ + +F E V N+++R R Sbjct: 96 DAQRALAFVAADENLTIDVKPAADAMLGALVAAGQRFRDEAQQDFVHGNVKARERMIAQY 155 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A++ + +++ T + +E +G+ T +GD PL L K +V +A G Sbjct: 156 AVAGARRGIVIGTDHAAESVMGFFTKFGDGGADLLPLAGLTKRRVRAVARH------LGG 209 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 L +P + LE LRP D+ + Y +DD ++ Sbjct: 210 AEALVMKVPTADLEA-----LRPLLPDETAYGVTYDQIDDFLE 247 >gi|295401278|ref|ZP_06811250.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus thermoglucosidasius C56-YS93] gi|312111900|ref|YP_003990216.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y4.1MC1] gi|294976685|gb|EFG52291.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus thermoglucosidasius C56-YS93] gi|311217001|gb|ADP75605.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y4.1MC1] Length = 279 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 93/230 (40%), Gaps = 25/230 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--------PPEDL 56 +KIA QL+ G+ A N + + E+ + D+I+ EL+ +GY ED Sbjct: 3 VKIACLQLDIAFGNPAENEQRVEKEIEKIAKDRPDIIVLPELWTTGYDLTRLDEIADEDG 62 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDK 114 K+FIQ + TH IV G ++ GV N++ I D G I+ K Sbjct: 63 TRTKAFIQKLAK--------THH--VNIVAGSVAKKTANGVTNTMYIADRNGAIVGEYSK 112 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 ++L + +E SG + R +IC DI I H+ QGAE LF + Sbjct: 113 LHL--FQLMNEHLYLQSGEKMGLFTLENARCAGVICYDIRFPEWIRAHM-VQGAEVLFVV 169 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P +L ++ + +I N+ G +F G S D Sbjct: 170 AEWPL--PRLSHWRTLLAARAIENQCYVIACNRAGSDPNNVFAGHSLVID 217 >gi|254455314|ref|ZP_05068743.1| NAD+ synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207082316|gb|EDZ59742.1| NAD+ synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 245 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 13/166 (7%) Query: 283 LRDYVQK--NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ---SLE 337 ++DY + ++IG+SGGIDS++ + ++ A+ + +P K S Q SL+ Sbjct: 14 IKDYADNMPSKAESLVIGISGGIDSSVSSTLS--AMTGLKTIVLSMPIKQKSHQHDLSLK 71 Query: 338 DAAACAKAL-GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 K + + + +L F + +S+F E N ++R+R L ++ Sbjct: 72 HQEWLIKNFKNVEGHTVNLDELFLAFSNSLSKFDNEHGMA----NSRARLRMTTLYQVAA 127 Query: 397 HSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +K +++ T NK E VG+ T YGD +P+ D KTQ+++L Sbjct: 128 ANKGIVVGTGNKVEDFGVGFYTKYGDGGVDISPIADCNKTQIWELG 173 >gi|222055437|ref|YP_002537799.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. FRC-32] gi|221564726|gb|ACM20698.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter sp. FRC-32] Length = 294 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 27/258 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K + I + Q D I+K EA +G +L++ EL Y F ++ Sbjct: 1 MKNIVIGLVQ-QSCSADRKETISKTIAGIREAAAKGAELVVLQELHCGPY------FCQT 53 Query: 62 FIQACSSAIDTLKS-DTHDGGA-----GIVVG---FPRQDQEGVLNSVVILDA-GNIIAV 111 C +++ T + GA G+V+ F R+ N+ V+L+ G+I Sbjct: 54 EDTDCFDLAESIPGPSTEEFGAIAKELGVVIVTSLFERRAPGLYHNTAVVLEKDGSIAGK 113 Query: 112 RDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K+++P+ F+EK F G +PI +LG+L+C D W + + GAE Sbjct: 114 YRKMHIPDDPAFYEKFYFTPGDLGFEPIQTSAGKLGVLVCWDQW-YPEAARLMALAGAEL 172 Query: 171 LF---SLNASPYYHNKLKKRH--EIVTGQISHV---HLPIIYVNQVGGQDELIFDGASFC 222 L ++ P ++ KKR +T Q SH +P++ VN+VG + + GA Sbjct: 173 LIYPTAIGWDPNDNDAEKKRQLDAWITIQRSHAVANGIPVVSVNRVGFEADPSKVGAGIE 232 Query: 223 FDGQQQLAFQMKHFSEQN 240 F G +A F Q Sbjct: 233 FWGNSFVAGPQGEFLAQG 250 >gi|300859092|ref|YP_003784075.1| NAD synthetase [Corynebacterium pseudotuberculosis FRC41] gi|300686546|gb|ADK29468.1| NAD synthetase [Corynebacterium pseudotuberculosis FRC41] gi|302331353|gb|ADL21547.1| NH(3)-dependent NAD(+) synthetase [Corynebacterium pseudotuberculosis 1002] Length = 276 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 34/257 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKEN----VQTIMLPYKYTSPQS 335 L Y+ + +G+SGG DS L A +AV+ L KE I LPY + + Sbjct: 31 LAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGVQADE- 89 Query: 336 LEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNILMA 393 EDA + + V + I + + ++Q L E + N+++R R A Sbjct: 90 -EDARIALAFIRPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKARQRMIAQYA 148 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 L+ +++ T + +E G+ T +GD + PL L K Q QL N+ Sbjct: 149 LAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNA------- 201 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE-ESFINNDQEYND 512 P S K P+A+L +E P P D++ + ++ +++I E ++ Sbjct: 202 -------PDSTWLKVPTADL------EEERPALP--DEVALGVTYSDIDTYIEGSGEVSE 246 Query: 513 ETVRYVEHLLYGSEYKR 529 + +EHL E+KR Sbjct: 247 KAAARIEHLWKIGEHKR 263 >gi|293415057|ref|ZP_06657700.1| NAD+ synthetase [Escherichia coli B185] gi|291432705|gb|EFF05684.1| NAD+ synthetase [Escherichia coli B185] Length = 275 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A+ + +T + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETDNESLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 ---LAALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 240 G-KNVPEQVARTIENWYLKTEHKRR 263 >gi|226223410|ref|YP_002757517.1| hypothetical protein Lm4b_00808 [Listeria monocytogenes Clip81459] gi|225875872|emb|CAS04576.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 296 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 29/269 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------- 53 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P Sbjct: 1 MTTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPPFEDAFNH 60 Query: 54 --------EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD- 104 E + I S+ + TLK + GI + + ++ N+ +I+D Sbjct: 61 PLATDFDNERTKWLNEAITEDSAYVLTLKELAKELKIGICATYLSKTEQKPQNTAIIIDR 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G II K++ +F + SG F I+LG++IC D + + L Sbjct: 121 KGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESARVLM 176 Query: 165 KQGAEFLFSLNA---SPYYHNKLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +GAE + NA +P N+L R E + G ++ + P + ++FD Sbjct: 177 LKGAEIILVPNACDINPARLNQLNSRAFENMVG-VAMANYPGEKWGRSTAFSPIVFDENG 235 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 D + + + SE F+ E++ D+ Sbjct: 236 ---DYRDNTIIETEDVSEGIFIAEFNLDE 261 >gi|77917730|ref|YP_355545.1| putative amidase [Pelobacter carbinolicus DSM 2380] gi|77543813|gb|ABA87375.1| putative amidase [Pelobacter carbinolicus DSM 2380] Length = 270 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 14/222 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++L Q N +GD+ GN+ K R + RQG L + E++ G+ +L + Sbjct: 10 QQLTAGCLQFNIAMGDVEGNLQKVRDGLQALARQGGRLAVLPEMWSCGFDYRNLATLAAH 69 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + L S HD +V+G P D + + N+ ++D G + K++L +S Sbjct: 70 TPQVVETVAAL-SARHD---MVVIGSLPELDGDALYNTSYLVDRGVVRGRYRKLHL--FS 123 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 E R +G R+G+ IC D+ + + + L GA+ + P Sbjct: 124 PMREDRYLQAGSKTLVADTSVGRIGLAICYDL-RFPELFRRLTLDGADVICLSAQWP--- 179 Query: 182 NKLKKRHEIVTGQISHV--HLPIIYVNQVGGQDELIFDGASF 221 K ++ H V + + + ++ N G Q +L F G+S Sbjct: 180 -KPRRDHWCVLTRARAIENQVFVLAANCCGVQGKLDFFGSSM 220 >gi|329768509|ref|ZP_08259998.1| NH(3)-dependent NAD(+) synthetase [Gemella haemolysans M341] gi|328836737|gb|EGF86392.1| NH(3)-dependent NAD(+) synthetase [Gemella haemolysans M341] Length = 273 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 37/229 (16%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAI---AVDALGKENVQ-----TIMLPYKYTSP 333 L+DY++KN F +++G+SGG DS LC + A++ L +E + + LPY Sbjct: 30 LKDYIKKNGFIRSLVLGISGGQDSTLCGKLCQMAINELKEETGEEYTFIAVRLPYGEQF- 88 Query: 334 QSLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 D A C AL K + I D V+ + + + + + N ++R R Sbjct: 89 ----DEADCNDALQFINPDKVYTVNIKDAVDASVNSL-KIAGVDITDFAKGNEKARERMK 143 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 + +++ +K +++ T + +E G+ T +GD PL L K R I Sbjct: 144 VQYSIATMNKGIVVGTDHAAEAITGFFTKHGDGGADIVPLYRLNK---------RQGKAI 194 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L P + K P+A+L RP D+ +L Y +DD ++ Sbjct: 195 LKALD-----CPEHLYLKKPTADLEEDRPALADEVALGVTYDNIDDYLE 238 >gi|209525676|ref|ZP_03274213.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Arthrospira maxima CS-328] gi|209493845|gb|EDZ94163.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Arthrospira maxima CS-328] Length = 269 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 15/177 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDT 77 D+ N+++AR E A RQG +LI E F ED + + S I + LK+ Sbjct: 16 DLQKNLSEARDLIELAIRQGAELIGLPENFSFMGEEEDKLMQGSEIAEETEKF--LKTTA 73 Query: 78 HDGGAGIVVG-FPRQDQEG-VLNSVVILD-AGNIIAVRDKI-----NLPNYSEFHEKRTF 129 ++ G FP EG V N+ +++D G +A +K+ N+P+ + + E T Sbjct: 74 QRFQVTLLGGGFPVPKGEGKVCNTALLVDPTGQELARYEKVHLFDVNVPDGNTYCESATV 133 Query: 130 ISGYSNDPIVFRDIRLGIL---ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 +G ++ P V+ LG L +C D+ + + +HL KQGAE LF A Y K Sbjct: 134 KAG-TDFPPVYNSPELGQLGLSVCYDV-RFPELYRHLSKQGAEVLFVPAAFTAYTGK 188 >gi|330719282|ref|ZP_08313882.1| NAD synthetase [Leuconostoc fallax KCTC 3537] Length = 277 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 35/232 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P EA+ V L+ Y+ N ++ ++I +SGG DS L I A+ + + Sbjct: 16 PTINPEAEIQRSVEFLKQYLINNPQYNSLVIAISGGQDSTLAGKIGQLAINELRASQFNM 75 Query: 327 PYK-------YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA 379 PY+ Y Q EDA A AL I + M++ L+ +G+V Sbjct: 76 PYQFIAIRQPYGEQQDEEDAQA---ALDFIQPDKVITTNIQAATDAMTRDLRS--AGLVV 130 Query: 380 EN-----IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 ++ I+ ++R A++ +++ T + +E G+ T YGD NPL L K Sbjct: 131 DDLSRGSIKPKMRMIAQYAVAREHNGVVIGTDHAAEAFAGFFTKYGDGGTDINPLWRLNK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 Q + N+ P S+ EK PSA+L RP D+ +L Sbjct: 191 RQGRDMLIALNA--------------PSSLYEKVPSADLEDDRPQLPDEVAL 228 >gi|310815802|ref|YP_003963766.1| N-carbamyl-D-amino acid amidohydrolase [Ketogulonicigenium vulgare Y25] gi|308754537|gb|ADO42466.1| N-carbamyl-D-amino acid amidohydrolase [Ketogulonicigenium vulgare Y25] Length = 196 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 17/163 (10%) Query: 7 IAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF---KKS 61 +A+AQ+ P+ + A IA+ EA+ +G ++F EL ++ + P ++ K+ Sbjct: 8 LAVAQMGPIQRSDNRASVIARQIEMLREAHARGARFVVFPELALTTFFPRWILSDAEKQE 67 Query: 62 FI--QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLP 118 F Q ++A L + G G +GF +D + N+ +I D AG II KI+LP Sbjct: 68 FYEHQMPNAATQPLFDEAARLGVGFYIGFAEKDGDRYFNTAIITDQAGKIILKYRKIHLP 127 Query: 119 NYSE--------FHEKRTFISGYSNDPIVFRDIRL-GILICED 152 +E EKR F G P+V + G IC D Sbjct: 128 GTAEPIAGRDTHHLEKRYFEPGNLGFPVVRSAYGIAGAFICND 170 >gi|187919176|ref|YP_001888207.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia phytofirmans PsJN] gi|187717614|gb|ACD18837.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia phytofirmans PsJN] Length = 292 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 9/153 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF---KK 60 L+IA AQ P+ GD+ GNIA+ A G L++F E F++GY P DL+ K Sbjct: 13 SLRIAAAQAQPISGDVTGNIARTVELTALAADAGAKLVVFPEKFLTGYEP-DLIAGDPAK 71 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPN 119 A + ++ ++ ++VG + + G+ ++S+V +G + K L Sbjct: 72 YAFDAHDARLEPIRDICRQREIAVIVGAATRGERGLHISSLVFSRSGAQLDSYHKQYL-- 129 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 YS E R + G + RL + +C D Sbjct: 130 YSS--ETRIYQPGTQGRMLELDGWRLALGVCYD 160 >gi|307568126|pdb|3IVZ|A Chain A, Crystal Structure Of Hyperthermophilic Nitrilase gi|307568127|pdb|3IVZ|B Chain B, Crystal Structure Of Hyperthermophilic Nitrilase gi|307568128|pdb|3IW3|A Chain A, Crystal Structure Of Hyperthermophilic Nitrilase gi|307568129|pdb|3IW3|B Chain B, Crystal Structure Of Hyperthermophilic Nitrilase gi|312597271|pdb|3KI8|A Chain A, Crystal Structure Of Hyperthermophilic Nitrilase gi|312597272|pdb|3KI8|B Chain B, Crystal Structure Of Hyperthermophilic Nitrilase gi|312597273|pdb|3KLC|A Chain A, Crystal Structure Of Hyperthermophilic Nitrilase gi|312597274|pdb|3KLC|B Chain B, Crystal Structure Of Hyperthermophilic Nitrilase Length = 262 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 14/173 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLVFKKSF 62 +K+A Q+NP + + N +KA + +EA++QG L++ ELF +GY E + VF+ + Sbjct: 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQ 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 L D G IV G +D + + NS V++ I KI+L Sbjct: 62 KIPEGETTTFLMDVARDTGVYIVAGTAEKDGDVLYNSAVVVGPRGFIGKYRKIHL----- 116 Query: 123 FHEKRTFIS----GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+ ++ F G+ + F +++G++I D W + L +GA+ + Sbjct: 117 FYREKFFFEPGDLGFRVFDLGF--MKVGVMIXFD-WFFPESARTLALKGADVI 166 >gi|300173612|ref|YP_003772778.1| NAD synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299887991|emb|CBL91959.1| NAD synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 274 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 47/280 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 PL + + V L+ Y+Q N + II +SGG DS L IA A+ + NV T Sbjct: 16 PLIDPLTEIRRSVDFLKQYLQHNPQYTSCIIAVSGGQDSTLAGKIAKIAIDELNVNTTIN 75 Query: 324 ---IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 I + Y + DA + AL + + M+ LQE SG+V Sbjct: 76 YELIAVRQPYGKQRDESDAIS---ALNFIQPSQIVTTNIKTATDAMTLALQE--SGLVVN 130 Query: 381 N-----IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 + I+ ++R A++ + +++ T + +E G+ T YGD NPL L K Sbjct: 131 DLSRGSIKPKMRMIAQYAVAREYQGIVIGTDHAAEAFAGFFTKYGDGGTDVNPLWRLNK- 189 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDD 491 R + LG P + +K+P+A+L RP D+ +L Y +DD Sbjct: 190 --------RQGRDMLKTLGA-----PKVLYDKTPTADLEDDRPQLPDEIALGVTYDCIDD 236 Query: 492 IIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQ 531 ++ + + + +EHL S +KR + Sbjct: 237 YLE------------GKNISTQDAEKIEHLYLTSAHKRHE 264 >gi|161521553|ref|YP_001584980.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans ATCC 17616] gi|189352276|ref|YP_001947903.1| predicted amidohydrolase [Burkholderia multivorans ATCC 17616] gi|160345603|gb|ABX18688.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans ATCC 17616] gi|189336298|dbj|BAG45367.1| predicted amidohydrolase [Burkholderia multivorans ATCC 17616] Length = 272 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 40/234 (17%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-PEDLVFKKSFIQA 65 + + Q V GD+A N+ A RA ++ + DLI+F E FI G+P PE++ I Sbjct: 6 VRLFQSTCVDGDVAHNLDAALRAIADSTGRA-DLIVFPETFIPGFPTPENVAKLAEPIDG 64 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL--PNYSE 122 S + + I GF D N+ +++D G+I+ K +L + Sbjct: 65 TSISAIRAAARAARVSVAI--GFAESDGGHYYNTALLIDEHGHILLKYRKTHLYASDIGV 122 Query: 123 FHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--SPY 179 F +TF P+ + IR+G+LIC DI + + L + GAE + L+ PY Sbjct: 123 FERGQTF-------PVCEWHGIRVGMLICFDI-EFPETARILARNGAELMLVLDGLMCPY 174 Query: 180 YHNKLKKRHEIVTGQISHVHLPI---------IYVNQVGGQDELIFDGASFCFD 224 G + LP+ + VN+ G D F G S D Sbjct: 175 -------------GNVHRTMLPVRAMENQAYMVLVNRAGPGDRYTFAGQSHVAD 215 >gi|170735912|ref|YP_001777172.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia MC0-3] gi|169818100|gb|ACA92682.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia MC0-3] Length = 281 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 59/280 (21%), Positives = 111/280 (39%), Gaps = 23/280 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKKSFI 63 +++ +AQL+ V GD+A N K E + G LI+F E +SG+P + + Sbjct: 1 MQVELAQLSLVDGDVAHNTRKVIDTIERVDVAGGTKLIVFPETTLSGFP------TRENV 54 Query: 64 QACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + +D ++ G + VG +D E N+ V++D G+II K +L Sbjct: 55 AEVAETLDGPRLLAVRDAARRTGVAVAVGLAERDGERFYNTTVLVDERGDIILRYRKTHL 114 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + F G + + +G+LIC DI + + + A+ L N + Sbjct: 115 ----WASDVGVFTPGDRFATCAWNGLTVGLLICYDI-EFPETARAIGALDADLLIVTNGN 169 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFD--GQQQLAFQMK 234 + +R + + + + VN+ G G D+L F G S D G+ L Sbjct: 170 MDPFGPVHRRA--IAARAMENQMFAVMVNRCGPGDDDLTFAGLSTLVDPFGESTLELGRD 227 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEA 274 + + ++Y+ D + P+++ + Sbjct: 228 EAVAPANLDLTRLEASREHYSYLHDARVALGLSPVEQADG 267 >gi|255324333|ref|ZP_05365454.1| NAD+ synthetase [Corynebacterium tuberculostearicum SK141] gi|255298663|gb|EET77959.1| NAD+ synthetase [Corynebacterium tuberculostearicum SK141] Length = 273 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 29/238 (12%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTI 324 P + EA+ V L DY++ ++G+SGG DS L A +AV+ + + Sbjct: 23 PFIDPEAEVQRRVDFLVDYLRTTGAKGYVLGISGGQDSTLAGKLAQLAVERVDGAEFWAV 82 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE---- 380 LP+ Q+ ED A A + D P ++ +L Q V + Sbjct: 83 RLPHGV---QADEDDAQIALDF-IQPDHRPTVNIKPATLALDEQVADALQLADVTDFNRG 138 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N ++R+R A++ A+++ T + +E + T +GD + PL L K Sbjct: 139 NTKARLRMTAQYAIAGEVGALVIGTDHAAENVTAFFTKWGDGAADLLPLAGLNK------ 192 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG P S EK P+A+L +P D+E+L Y +DD ++ Sbjct: 193 ---RQGAALLEHLG-----APRSTWEKVPTADLEDDKPQLPDEEALGVTYAHIDDYLE 242 >gi|148554126|ref|YP_001261708.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sphingomonas wittichii RW1] gi|148499316|gb|ABQ67570.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sphingomonas wittichii RW1] Length = 282 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 14/236 (5%) Query: 6 KIAIAQLNPVVGD-IAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKS 61 +I++A L GD I NIA+ + EA +G ++L ELF Y ++ +F ++ Sbjct: 3 QISVAALQLAFGDDIDANIAEVSKLVREAAGKGAQVVLPPELFEGHYFCQVEDEGMFARA 62 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 A+ +++ + I F D + NS+ ++D G + V K ++P+ Sbjct: 63 RPVGEHKAVRAMQALAAELKIHIPTSFFEADGQHHYNSLAMIDPDGRVQGVYRKSHIPDG 122 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--- 176 + EK F G + + +G+ IC D W + + GA+ LF A Sbjct: 123 PGYEEKFYFRPGNTGFKVWPAEGTTVGVGICWDQWY-PETARAMMLMGAQVLFYPTAIGN 181 Query: 177 ---SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 P R ++ +S+V +P++ N++G ++ F G SF D + L Sbjct: 182 EPHDPDLDTSRLWRRAMIGHAVSNV-VPVVAANRIGTENGQTFYGNSFICDQRGDL 236 >gi|16331918|ref|NP_442646.1| nitrilase [Synechocystis sp. PCC 6803] gi|1001835|dbj|BAA10717.1| nitrilase [Synechocystis sp. PCC 6803] Length = 346 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 28/174 (16%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PEDLV 57 K ++ A AQ++PV+ G + K A A ++G++LI+F E F+ YP ++ Sbjct: 11 KNIRAAAAQISPVLFSQQGTMEKVLDAIANAAKKGVELIVFPETFVPYYPYFSFVEPPVL 70 Query: 58 FKKSFIQACSSAI-------DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 KS ++ A+ + G +V+G +++ + N+ +I DA G ++ Sbjct: 71 MGKSHLKLYQEAVTVPGKVTQAIAQAAKTHGMVVVLGVNEREEGSLYNTQLIFDADGALV 130 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSN 158 R KI P Y HE+ + G D R + RLG L C W++ N Sbjct: 131 LKRRKIT-PTY---HERMVWGQG---DGAGLRTVDTTVGRLGALAC---WEHYN 174 >gi|302517934|ref|ZP_07270276.1| hydrolase [Streptomyces sp. SPB78] gi|302426829|gb|EFK98644.1| hydrolase [Streptomyces sp. SPB78] Length = 276 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 32/238 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ + GD+ N+ A G L++ ELF+SGY PE ++ + Sbjct: 1 MRLALAQSSGTPGDVHANLDALDALAARAASSGAHLLVTPELFLSGYAPEHRSPAETGVA 60 Query: 65 ACSSAIDTLKSDTHDG----------------GAGIVVGFPRQDQEGVLNSVVILDA-GN 107 S D G ++ G+P + NS ++ G Sbjct: 61 GSRSEPDAPPLAALALEEAEAAAELGALARRHGLAVLAGYPERAGSATYNSALLAGPDGA 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIV---FRDIRLGILICEDIWKNSNICKHLK 164 +A K +L Y + E+ F +G + +V +RLG+LIC D+ N+ H Sbjct: 121 PLAAYRKTHL--YGPY-ERAVFTAG--DRAVVQAELHGVRLGVLICYDVEFPENVRAH-A 174 Query: 165 KQGAEFLFSLNA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 G E L A +PY + + + V S +H I YVN+ G + F G S Sbjct: 175 DAGTEVLLVPTALLAPY--DFVARSLVPVRAFESQLH--IAYVNRTGPEGGFDFVGLS 228 >gi|254418084|ref|ZP_05031808.1| hydrolase, carbon-nitrogen family [Brevundimonas sp. BAL3] gi|196184261|gb|EDX79237.1| hydrolase, carbon-nitrogen family [Brevundimonas sp. BAL3] Length = 289 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 18/239 (7%) Query: 7 IAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSF 62 I +A + G D+ NIAK EA +G +IL +ELF Y E+ F +++ Sbjct: 5 ITVAGVQTSYGEDMQANIAKTIDFVREAAGKGAQVILPSELFQGPYFCVSQEEHWFSQAY 64 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 + + + G I V +D NS+V+LDA G + V K ++P+ Sbjct: 65 EWREHPCVTAMAPMARELGVAIPVSIFEKDGPQYYNSLVMLDADGEALGVYRKSHIPDGP 124 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNAS 177 + EK F G + + R ++G+ IC D W + + GA+ L ++ Sbjct: 125 GYQEKYYFRPGDTGFKVWKTRFGKVGVGICWDQW-FPEAARAMMLMGADVLMYPTAIGTE 183 Query: 178 PY---YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL----IFDGASFCFDGQQQL 229 P+ H R + +S+ +P++ N++G + F G SF D Q L Sbjct: 184 PHDATLHTAQPWRRAMQGHAVSNA-VPVVGANRIGHETVTEVGQTFYGHSFIADQQGDL 241 >gi|149276688|ref|ZP_01882831.1| carbon-nitrogen hydrolase family protein [Pedobacter sp. BAL39] gi|149232357|gb|EDM37733.1| carbon-nitrogen hydrolase family protein [Pedobacter sp. BAL39] Length = 240 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 13/231 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+IAQ+NP+ G I+ NI K A G + F EL ++GY P + K+ Sbjct: 1 MKISIAQINPIAGRISANIEKHISFVTLAAASGAGSVFFPELSLTGYEPR--LAKELATH 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD--AGNIIAVRDKINLPNYSE 122 D + ++ I VG P Q Q G+ S+++ G + + +++L Sbjct: 59 PYDIRFDEFQKLSNAKKITIGVGMPLQVQRGIRISMIVFQPHTGRTVYSKQQLHL----- 113 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 EK F G + +++ IC + + S+ + K GA+ S A Sbjct: 114 -DEKPYFKKGTEQVVLNINGLKVVPAICYESLQPSH-SRKAHKLGADVYLSSVAKSEAGV 171 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 L H + +P++ N +G D+ G S + L QM Sbjct: 172 NLGMEHYPAIAK--KYAMPVLMANSLGDCDDFRSVGKSSIWTRSGDLVSQM 220 >gi|104779678|ref|YP_606176.1| amidohydrolase [Pseudomonas entomophila L48] gi|95108665|emb|CAK13359.1| putative amidohydrolase, carbon-nitrogen family [Pseudomonas entomophila L48] Length = 264 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 119/273 (43%), Gaps = 37/273 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q P D+ GN+ + + ++A QG L++ E+F+SGY ++ Sbjct: 1 MRIALFQGTPAPLDVPGNLDRLQHQAQQAAAQGAQLLVCPEMFLSGYN-----IGLDQVE 55 Query: 65 ACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLP 118 + A+D T+ IV G+P + ++G + NSV ++D +L Sbjct: 56 RLAEAVDGPSAMTVVEIAQTYRIAIVYGYPERGEDGAIYNSVQLIDG-------HGSSLC 108 Query: 119 NYSEFH-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 NY + H ++ F G ++ P+V ++G+LIC DI N + L GAE + Sbjct: 109 NYRKTHLFGELDRSMFSPGANHFPVVELNGWKVGMLICYDIEFPEN-ARRLALDGAELIL 167 Query: 173 --SLNASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + N +PY + ++ R Q + Y N G + E+ + G S G + Sbjct: 168 VPTANMAPYDFVCQVTVRSRAQENQCY-----LAYANYCGSEGEIRYCGQS-SIVGPEGD 221 Query: 230 AFQMKHFSEQNFMTEWHYDQQLS---QWNYMSD 259 M E + + ++ LS + Y++D Sbjct: 222 VLAMAGHEECQLLADLERERVLSGREAFPYLTD 254 >gi|195636616|gb|ACG37776.1| hydrolase, carbon-nitrogen family [Zea mays] gi|223949801|gb|ACN28984.1| unknown [Zea mays] gi|223950059|gb|ACN29113.1| unknown [Zea mays] Length = 300 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 20/235 (8%) Query: 6 KIAIAQLNPVVGDI-AGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VFKKS 61 K+A+A + D+ A N+A A R EA+++G ++L ELF Y + F+++ Sbjct: 8 KVAVAAVQFACTDVEAENVATAERLIREAHKKGAKIVLVQELFEGHYFCQAQRLDFFRRA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 + I ++ + I V F + NSV I+DA G + + K ++P+ Sbjct: 68 KPYKGNPTIIRMQQLAKELEVVIPVSFFEEANNAHYNSVAIIDADGADLGLYRKSHIPDG 127 Query: 121 SEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNA 176 + EK F G + + +G+ IC D W + + GAE LF ++ + Sbjct: 128 PGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQW-FPECARAMALLGAEILFYPTAIGS 186 Query: 177 SPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 P N + H ++ G +P++ N++G G+ + F G SF Sbjct: 187 EPQDCNLDSREHWKRVMQGHAGANLVPLVASNRIGRETVDTEHGKSSITFYGNSF 241 >gi|116748500|ref|YP_845187.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116697564|gb|ABK16752.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 260 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 15/223 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +++L A QL V G++ N+A AR EE L++ E++ G+P L + Sbjct: 1 MRELVAACLQLRVVPGNVDANLANAREGIEELASGECRLVVLPEMWACGFPYSRL---QE 57 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 ++ ++ G +V P + N+ ++DA G I K++L + Sbjct: 58 VASRTPEVVEEMRGWARRHGMVLVGSLPESVDGRIYNTSYVIDANGEIAGSYRKVHL--F 115 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP-- 178 S HE F G ++ LG++IC D+ + + + L GA + + P Sbjct: 116 SLHHEDLHFGRGETSLVCSTEAGELGVMICYDL-RFPELGRKLALDGARIMCVSSHWPDI 174 Query: 179 -YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 H L R V Q L +I N G + ++ + GAS Sbjct: 175 RIDHWSLLLRARAVENQ-----LFVIGCNGCGTEKKMRYGGAS 212 >gi|329296174|ref|ZP_08253510.1| NAD synthetase [Plautia stali symbiont] Length = 275 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 54/283 (19%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + + + V L+ Y++ + F K +++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDPQQEIRVSVDFLKSYLKAHPFIKTLVLGISGGQDSTLTGKLAQTAITELREETGDH 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM---SQFLQEEP 374 + LPY + D C AL + P LV + + + LQE Sbjct: 75 DYSFIAVRLPYGVQA-----DEQDCQDALAF---IQPDRTLVVNIKEAVLASKRALQEAG 126 Query: 375 ---SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 S V N ++R R +++ +K +++ T + +E G+ T YGD NP+ Sbjct: 127 IALSDFVRGNEKARERMKAQYSIAGMTKGVVVGTDHAAEAVTGFFTKYGDGGSDINPIFR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K Q QL LG P + K P+A+L RP D+ +L Y Sbjct: 187 LNKGQGKQL---------LKALG-----CPEHLYLKHPTADLEDDRPGLQDEVALGVTYQ 232 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 +DD + E I+ D + +E +E+KRR Sbjct: 233 QIDDFL------EGKTIDAD------AAKIIEGWYTKTEHKRR 263 >gi|302664092|ref|XP_003023682.1| nitrilase, putative [Trichophyton verrucosum HKI 0517] gi|291187688|gb|EFE43064.1| nitrilase, putative [Trichophyton verrucosum HKI 0517] Length = 335 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 16/154 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 LK+AI Q P D+AG++ K EA + L+ F E +I GYP P D + Sbjct: 6 LKVAITQAQPKWLDLAGSVEKTVNLIAEAAKGDARLVAFPECWIPGYPGWIWQRPVDPII 65 Query: 59 KKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGV-LNSVVILDAGNIIAVR 112 +IQ S+ ++T+KS + +V+GF D V + +I G ++ R Sbjct: 66 NTKYIQNSLSVNSAEMNTIKSAAKENNIAVVLGFVEAIDTHSVYIAQAIISPKGELLMHR 125 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLG 146 KI P + E+ F G +D D+ G Sbjct: 126 RKIK-PTHM---ERTVFGDGSGSDLTNVADVDFG 155 >gi|171319158|ref|ZP_02908278.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia ambifaria MEX-5] gi|171095638|gb|EDT40598.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia ambifaria MEX-5] Length = 281 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 19/227 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKKSFI 63 +++ +AQL V GD+A N K E + G LI+F E +SG+P D V Sbjct: 1 MQVELAQLTLVDGDVAHNTRKVIDTIEHVDSAGGTRLIVFPETTLSGFPTRDTV--ADVA 58 Query: 64 QACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 Q A+ ++ G + VG +D N+ V++D I +R Y + Sbjct: 59 QPLDGPALSAVRDAARTKGVAVAVGLAERDGGRFYNTTVLVDEQGDIVLR-------YRK 111 Query: 123 FH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 H + F G + + +G+LIC DI + + + A+ L N + Sbjct: 112 THLWASDVGVFTPGDRFATCRWNGLTVGLLICYDI-EFPETARAIGALDADLLIVTNGNM 170 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFD 224 + +R + + + + VN+ G G D L F G S D Sbjct: 171 DPFGPVHRRA--IAARAMENQMFAVMVNRCGSGDDNLTFAGLSALVD 215 >gi|22297656|ref|NP_680903.1| hypothetical protein tlr0112 [Thermosynechococcus elongatus BP-1] gi|22293833|dbj|BAC07665.1| tlr0112 [Thermosynechococcus elongatus BP-1] Length = 285 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 14/231 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 ++ L +A Q + D+ NI +A+++G LI+ ELF Y ++ F Sbjct: 1 MRTLTVAAIQAQ-LTDDVETNILHLSDLVRQAHQRGAQLIVLPELFEGHYFCKEEREIHF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNI-IAVRDKINL 117 +++ I ++ + I V F + NSV ++DAG + + V K ++ Sbjct: 60 QRAHPVKKHPTIAHFEALARELEVVIPVSFFEKAGTVYYNSVAMIDAGGVNLGVYRKSHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ + EK F G + + R R+G+ IC D W + + GAE L A Sbjct: 120 PDGPGYEEKFYFRPGNTGFRVWRTRYGRIGVGICWDQW-FPEAARVMTLMGAEVLVYPTA 178 Query: 177 ------SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 P K + +V +++V +P++ N+VG + +F G+SF Sbjct: 179 IGSEPHDPTLDTKDPWQRVMVGHAVANV-IPVVAANRVGNEGGQVFYGSSF 228 >gi|326494888|dbj|BAJ85539.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 365 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 31/280 (11%) Query: 6 KIAIAQLNPVVGD-IAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VFKKS 61 ++A+A + D +A N+A A R EA+++G +++L ELF Y + F ++ Sbjct: 71 RVAVAAVQFACTDTVADNVAAAERLIREAHKKGANIVLIQELFEGHYFCQAQRMDFFGRA 130 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 + I ++ + I V F + NSV I+DA G + + K ++P+ Sbjct: 131 KPYKENPTIMRMQKLAKELDVVIPVSFFEEAGNAHYNSVAIIDADGTDLGLYRKSHIPDG 190 Query: 121 SEFHEKRTFISGYSNDPIVFRDIR-----LGILICEDIWKNSNICKHLKKQGAEFLF--- 172 + EK F G + F+ + +G+ IC D W + + QGAE LF Sbjct: 191 PGYQEKFYFNPGDTG----FKAFKTKYATIGVGICWDQW-FPETARAMVLQGAEILFYPT 245 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASFC 222 ++ + P N + H ++ G +P++ N++G G + F G SF Sbjct: 246 AIGSEPQDMNLDSREHWKRVMQGHAGANLVPLVASNRIGKETVETEHGNSTIKFYGNSFI 305 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ---WNYMSD 259 ++ E+ + E+ D+ S W D Sbjct: 306 AGPTGEIVKLANDKDEEVLVAEFDLDEIKSTRHGWGIFRD 345 >gi|302498666|ref|XP_003011330.1| nitrilase, putative [Arthroderma benhamiae CBS 112371] gi|291174880|gb|EFE30690.1| nitrilase, putative [Arthroderma benhamiae CBS 112371] Length = 335 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 16/154 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 LK+AI Q P D+AG++ K EA + L+ F E +I GYP P D + Sbjct: 6 LKVAITQAQPKWLDLAGSVEKTVNLIAEAAKGDARLVAFPECWIPGYPGWIWQRPVDPII 65 Query: 59 KKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGV-LNSVVILDAGNIIAVR 112 +IQ S+ ++T+KS + +V+GF D V + +I G ++ R Sbjct: 66 NTKYIQNSLSVNSAEMNTIKSAAKENNIAVVLGFVEAIDTHSVYIAQAIISPKGELLMHR 125 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLG 146 KI P + E+ F G +D D+ G Sbjct: 126 RKIK-PTHM---ERTVFGDGSGSDLTNVADVDFG 155 >gi|291276829|ref|YP_003516601.1| putative carbon-nitrogen hydrolase [Helicobacter mustelae 12198] gi|290964023|emb|CBG39862.1| putative carbon-nitrogen hydrolase [Helicobacter mustelae 12198] Length = 290 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 18/152 (11%) Query: 98 NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D ++A + K+++P F+EK F G PI +LG+L+C D W Sbjct: 94 NTAVVFDKDGLVAGKYRKMHIPEDPNFYEKFYFTPGDLGFAPIQTTIGKLGVLVCWDQW- 152 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH--NKLKKRHEI---VTGQISHV---HLPIIYVNQ 207 + + +GAE L A ++ +K +K+ ++ + Q H LP++ VN+ Sbjct: 153 YPEAARIMALKGAEILIYPTAIGWFEGDSKAEKQRQLEAWIAVQRGHAIANGLPVVAVNR 212 Query: 208 VGGQ-------DELIFDGASFCFDGQQQLAFQ 232 VG + D ++F G+SF F Q +L Q Sbjct: 213 VGFEKDTSGVSDGILFWGSSFVFGPQGELLAQ 244 >gi|221135508|ref|ZP_03561811.1| NAD synthetase [Glaciecola sp. HTCC2999] Length = 277 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 33/219 (15%) Query: 295 VIIGLSGGIDSALC---AAIAVDAL-----GKENVQTIMLPYKYTS-PQSLEDAAACAKA 345 +++G+SGGIDS A +AVD L G+ + LPY + Q +D+ + Sbjct: 40 LVLGISGGIDSCTLGRLAQLAVDGLNEQAQGQYQFIAVRLPYSTQADEQDAQDSITFIQP 99 Query: 346 L-GCKYDVLPIHDLVNHFFSLM---SQFLQEEPSGI--VAENIQSRIRGNILMALSNHSK 399 +V P D ++ + + + ++P I V N+++R R ++ Sbjct: 100 TQSVSVNVQPGTDAIHAQTTQALADAGLMPQDPHHIDFVKGNVKARARMVTQYEIAGMLN 159 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++L T + +E G+ T YGD + PL L K QV QLA++ + Sbjct: 160 GLVLGTDHSAENITGFYTKYGDGACDLAPLFGLNKRQVRQLATYMGA------------- 206 Query: 460 IPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A+L P D+++L Y +DD ++ Sbjct: 207 -PEKVITKAPTADLESLTPQLADEQALGLSYDEIDDFLE 244 >gi|315607789|ref|ZP_07882782.1| para-aminobenzoate synthase [Prevotella buccae ATCC 33574] gi|315250258|gb|EFU30254.1| para-aminobenzoate synthase [Prevotella buccae ATCC 33574] Length = 295 Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 21/182 (11%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+++ G I + K+++P+ ++EK F G PI +LG+L+C D W Sbjct: 100 NTAVVMERDGTIAGIYRKMHIPDDPAYYEKFYFTPGDLGFQPIQTSVGKLGVLVCWDQWY 159 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + QGAE L A Y + + ++R T Q H LP+I VN+ Sbjct: 160 -PEAARLMALQGAELLIYPTAIGYESSDAPDEQQRQRDAWTTVQRGHAVANGLPVISVNR 218 Query: 208 VG------GQDELI-FDGASFCFDGQQQLAFQMKHFSEQNFMTE---WHYDQQLSQWNYM 257 VG GQ I F G+S Q + F+ E++ + H +Q W ++ Sbjct: 219 VGFEPDPSGQTNGIQFWGSSMVVGPQGEFLFRSGDSEEESAVVNVDLAHSEQVRRWWPFL 278 Query: 258 SD 259 D Sbjct: 279 RD 280 >gi|11037694|gb|AAG27700.1|AF299296_3 NH(3)-dependent NAD(+)synthetase [Pseudomonas putida] Length = 275 Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 32/247 (12%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 EA+ V ++ ++ +++G+SGG+DS A +A A+ + QT Sbjct: 25 EAEKARRVAFIQQCLKNAGLKTLVLGISGGVDSLTGALLAQRAINELREQTGDVHYRFIA 84 Query: 324 IMLPYKYTSPQSLEDAAACAK---ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 + LPY+ + DA + A Y +Q Q G Sbjct: 85 VRLPYQVQHDE--HDAHGVHRFHPARRMTYGEHRAGGAGAGGRGRGAQGWQAGAGGFRGG 142 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N ++R+R ++ +++ T + +E +G+ T +GD + PL L K QV + Sbjct: 143 NTKARMRMVAQYTIAGARGGLVIDTDHAAEAVMGFFTKFGDGACDLAPLSGLVKHQVRDI 202 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIKRI 496 A S G P S++EK P+A+L P + D+ S Y +D + Sbjct: 203 A---RSFG-----------APESLVEKVPTADLEDLAPGKPDEASHGVTYAQIDAFLHGQ 248 Query: 497 VENEESF 503 E+EE+F Sbjct: 249 AESEEAF 255 >gi|313498913|gb|ADR60279.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida BIRD-1] Length = 247 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/239 (20%), Positives = 103/239 (43%), Gaps = 19/239 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ QL + GD+ GN+ + E+A G +L++F EL ++GY P V +++ + Sbjct: 1 MKLCAVQLASLKGDLPGNLQRHLVCIEQAAALGAELVVFPELSLTGYEPS--VARQAALP 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL--DAGNIIAVRDKIN---LPN 119 S+ +D L++ G + VG P +G+ + I +A + + +++ LP Sbjct: 59 VTSARLDPLQAACDRLGITVAVGLPLPTPDGIRIGMPIFCPEAPRQVYAKQRLHDDELPY 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 ++ ++ G + R+ IC + ++ ++ +L S+ + Sbjct: 119 FTPGNQALLLEVG---------EHRVAPAICYESMFLAHAAVARERGADLYLVSVAKT-- 167 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 +++ + + +P++ N VG D I G S ++ Q L + SE Sbjct: 168 -AKGIREGYAHYPEVARELGMPVLMANCVGPADTFIGAGGSAAWNTQGHLLASLDDHSE 225 >gi|307706232|ref|ZP_07643048.1| NAD synthetase [Streptococcus mitis SK321] gi|307618373|gb|EFN97524.1| NAD synthetase [Streptococcus mitis SK321] Length = 274 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 30/254 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVVDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + F M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKEFADAMTAAVEATGSSVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGSHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII- 493 L L E+ P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 L---------------LKELGADPALYEKIPTADLEEDKPGLADEVALGVTYEEIDDYLE 239 Query: 494 -KRIVENEESFINN 506 K I ++ I N Sbjct: 240 GKTISPEAQATIEN 253 >gi|291556727|emb|CBL33844.1| N-carbamoylputrescine amidase [Eubacterium siraeum V10Sc8a] Length = 293 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 35/252 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+ +K+A Q++ D NIAKA R +A G ++IL ELF Y ++ + Sbjct: 1 MISNVKVAAVQMS-CSDDREENIAKAERMVRQAASDGANVILLPELFELPYFCQEKNYDY 59 Query: 61 SFIQACSS---AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 ++ + A+ + G I V F + N++ ++D G+++ + K + Sbjct: 60 YYLADKTEENPAVKRFMQVAKETGTVIPVSFYEKHGNAFFNTIAMIDCDGSLMGIYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIR-LGILICEDIW----------KNSNICKHLKK 165 +P+ + EK F G + + +G+ IC D W +++ + Sbjct: 120 IPDDHFYQEKFYFTPGDTGFKVWNTKFGCIGVGICWDQWFPEAARCMALMGADMLLYPTA 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ------------DE 213 G+E + ++ P++ ++ G + +P+I N++G + Sbjct: 180 IGSEPILECDSMPHWRRAMQ-------GHSAANLVPVIAANRIGTEYVHPTPENQNQNSS 232 Query: 214 LIFDGASFCFDG 225 L F G+SF D Sbjct: 233 LTFYGSSFITDA 244 >gi|167751202|ref|ZP_02423329.1| hypothetical protein EUBSIR_02188 [Eubacterium siraeum DSM 15702] gi|167655709|gb|EDR99838.1| hypothetical protein EUBSIR_02188 [Eubacterium siraeum DSM 15702] Length = 293 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 35/252 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+ +K+A Q++ D NIAKA R +A G ++IL ELF Y ++ + Sbjct: 1 MISNVKVAAVQMS-CSDDREENIAKAERMVRQAASDGANVILLPELFELPYFCQEKNYDY 59 Query: 61 SFIQACSS---AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 ++ + A+ + G I V F + N++ ++D G+++ + K + Sbjct: 60 YYLADKTEENPAVKRFMQVAKETGTVIPVSFYEKHGNAFFNTIAMIDCDGSLMGIYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIR-LGILICEDIW----------KNSNICKHLKK 165 +P+ + EK F G + + +G+ IC D W +++ + Sbjct: 120 IPDDHFYQEKFYFTPGDTGFKVWNTKFGCIGVGICWDQWFPEAARCMALMGADMLLYPTA 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ------------DE 213 G+E + ++ P++ ++ G + +P+I N++G + Sbjct: 180 IGSEPILECDSMPHWRRAMQ-------GHSAANLVPVIAANRIGTEYVHPTPENQNQNSS 232 Query: 214 LIFDGASFCFDG 225 L F G+SF D Sbjct: 233 LTFYGSSFITDA 244 >gi|288924776|ref|ZP_06418713.1| hydrolase, carbon-nitrogen family [Prevotella buccae D17] gi|288338563|gb|EFC76912.1| hydrolase, carbon-nitrogen family [Prevotella buccae D17] Length = 295 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 21/182 (11%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+++ G I + K+++P+ ++EK F G PI +LG+L+C D W Sbjct: 100 NTAVVMERDGTIAGIYRKMHIPDDPAYYEKFYFTPGDLGFQPIQTSVGKLGVLVCWDQWY 159 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + QGAE L A Y + + ++R T Q H LP+I VN+ Sbjct: 160 -PEAARLMALQGAELLIYPTAIGYESSDAPDEQQRQRDAWTTVQRGHAVTNGLPVISVNR 218 Query: 208 VG------GQDELI-FDGASFCFDGQQQLAFQMKHFSEQNFMTE---WHYDQQLSQWNYM 257 VG GQ I F G+S Q + F+ E++ + H +Q W ++ Sbjct: 219 VGFEPDPSGQTNGIQFWGSSMVVGPQGEFLFRSGDSEEESAVVNVDLAHSEQVRRWWPFL 278 Query: 258 SD 259 D Sbjct: 279 RD 280 >gi|326488501|dbj|BAJ93919.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 365 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 63/276 (22%), Positives = 114/276 (41%), Gaps = 23/276 (8%) Query: 6 KIAIAQLNPVVGD-IAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VFKKS 61 ++A+A + D +A N+A A R EA+++G +++L ELF Y + F ++ Sbjct: 71 RVAVAAVQFACTDTVADNVAAAERLIREAHKKGANIVLIQELFEGHYFCQAQRMDFFGRA 130 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 + I ++ + I V F + NSV I+DA G + + K ++P+ Sbjct: 131 KPYKENPTIMRMQKLAKELDVVIPVSFFEEAGNAHYNSVAIIDADGTDLGLYRKSHIPDG 190 Query: 121 SEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNA 176 + EK F G + + +G+ IC D W + + QGAE LF ++ + Sbjct: 191 PGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQW-FPETARAMVLQGAEILFYPTAIGS 249 Query: 177 SPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASFCFDGQ 226 P N + H ++ G +P++ N++G G + F G SF Sbjct: 250 EPQDMNLDSREHWKRVMQGHAGANLVPLVASNRIGKETVETEHGNSTIKFYGNSFIAGPT 309 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQ---WNYMSD 259 ++ E+ + E+ D+ S W D Sbjct: 310 GEIVKLANDKDEEVLVAEFDLDEIKSTRHGWGIFRD 345 >gi|291531721|emb|CBK97306.1| N-carbamoylputrescine amidase [Eubacterium siraeum 70/3] Length = 293 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 35/252 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+ +K+A Q++ D NIAKA R +A G ++IL ELF Y ++ + Sbjct: 1 MISNVKVAAVQMS-CSDDREENIAKAERMVRQAASDGANVILLPELFELPYFCQEKNYDY 59 Query: 61 SFIQACSS---AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 ++ + A+ + G I V F + N++ ++D G+++ + K + Sbjct: 60 YYLADKTEENPAVKRFMQVAKETGTVIPVSFYEKHGNAFFNTIAMIDCDGSLMGIYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIR-LGILICEDIW----------KNSNICKHLKK 165 +P+ + EK F G + + +G+ IC D W +++ + Sbjct: 120 IPDDHFYQEKFYFTPGDTGFKVWNTKFGCIGVGICWDQWFPEAARCMALMGADMLLYPTA 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ------------DE 213 G+E + ++ P++ ++ G + +P+I N++G + Sbjct: 180 IGSEPILECDSMPHWRRAMQ-------GHSAANLVPVIAANRIGTEYVHPTPENQNQDSS 232 Query: 214 LIFDGASFCFDG 225 L F G+SF D Sbjct: 233 LTFYGSSFITDA 244 >gi|169825794|ref|YP_001695952.1| NAD synthetase [Lysinibacillus sphaericus C3-41] gi|238688188|sp|B1HTT1|NADE_LYSSC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|168990282|gb|ACA37822.1| NH(3)-dependent NAD(+) synthetase [Lysinibacillus sphaericus C3-41] Length = 274 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKE------NVQTIMLPYKYTS 332 L++Y + +F K ++G+SGG DS L A +AVD L KE + I LPY + Sbjct: 30 LKEYAKHYSFVKGFVLGISGGQDSTLTGKLAQLAVDELNKEVGEMKYSFWAIRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 Q +DA K G + I D V+ ++ E + V N ++R R + Sbjct: 90 DEQDCQDAIDYIKPTGSY--TVNIKDAVDASVKALAN-AGVELNDFVKGNEKARERMKVQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ + ++L T + +E G+ T +GD P+ L K Q QL + N Sbjct: 147 YSIAAMNGGVVLGTDHAAEAITGFYTKFGDGGADLMPIFRLNKRQGKQLLAELNC----- 201 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + K P+A+L RP D+ +L Y +DD ++ Sbjct: 202 ---------PEHLYTKVPTADLEENRPSLPDEVALGVSYDQIDDYLE 239 >gi|118474614|ref|YP_891723.1| carbon-nitrogen family hydrolase [Campylobacter fetus subsp. fetus 82-40] gi|118413840|gb|ABK82260.1| hydrolase, carbon-nitrogen family [Campylobacter fetus subsp. fetus 82-40] Length = 289 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 20/246 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED-LVFKKSFI 63 +K+A+ + G+ I + + EEA +G +LI+ EL Y +D V Sbjct: 1 MKVALVA-HKFYGNKPDTIKRTTKLIEEAANKGAELIVLEELHQGSYFCQDESVDSFELA 59 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKINLPNYS 121 S + H+ +V + G+ + SVV + G I K+++P+ Sbjct: 60 NDFESDMAYWAEVAHEFKIVLVTSLFEKRSAGLYHNTSVVFDNDGRIAGKYRKMHIPDDP 119 Query: 122 EFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F+EK F G +PI RLG+L+C D W + + +GA+ L A ++ Sbjct: 120 NFYEKFYFAPGDLGFEPIDTSIGRLGVLVCWDQWY-PEAARLMALKGAQILIYPTAIGWF 178 Query: 181 HN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQDELIFDGASFCFDGQ 226 K ++ V Q H LP++ VN+VG G + F G SF F Q Sbjct: 179 DGDSEDEKSRQLEAWVAVQRGHSVANGLPVVTVNRVGFEAAPDGNGGIRFWGNSFVFGPQ 238 Query: 227 QQLAFQ 232 + F+ Sbjct: 239 GEELFR 244 >gi|32265837|ref|NP_859869.1| hypothetical protein HH0338 [Helicobacter hepaticus ATCC 51449] gi|32261886|gb|AAP76935.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 296 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 25/184 (13%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D G+I K+++P+ +F+EK F G +PI +LG+LIC D W Sbjct: 101 NTAVVFDIDGSIAGKYRKMHIPDDPQFYEKFYFTPGDLGFEPISTSLGKLGVLICWDQW- 159 Query: 156 NSNICKHLKKQGAEFLFSLNASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GA+ L A ++ K +++ + Q H LP + +N+ Sbjct: 160 YPEAARIMALKGAQMLIYPTAIGWFDEDTLEEKTRQKEAWIAVQRGHSVANGLPTMAINR 219 Query: 208 VGGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WN 255 VG + + + F G+SF F Q +L Q E+ + E D Q S+ W Sbjct: 220 VGFESDSSKVGNGIRFWGSSFVFGAQGELLAQGSENKEEIILVE--IDLQRSEEVRRMWP 277 Query: 256 YMSD 259 ++ D Sbjct: 278 FLRD 281 >gi|115351690|ref|YP_773529.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia ambifaria AMMD] gi|115281678|gb|ABI87195.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia ambifaria AMMD] Length = 281 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 19/227 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKKSFI 63 +++ +AQL V GD+ N K E + G LI+F E +SG+P D V Sbjct: 1 MQVELAQLTLVDGDVVHNTRKVIDTIEHVDSAGGTRLIVFPETTLSGFPTRDTV--ADVA 58 Query: 64 QACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 Q A+ ++ G + VG +D N+ V++D I +R Y + Sbjct: 59 QPLDGPALSAVRDAARQKGVAVAVGLAERDGGQFYNTTVLVDEQGDIVLR-------YRK 111 Query: 123 FH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 H + F G + + + +G+LIC DI + + + A+ L N + Sbjct: 112 THLWASDVGVFTPGDRFETCSWNGLTVGLLICYDI-EFPETARAVGALDADLLIVTNGNM 170 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFD 224 + +R + + + + VN+ G G D L F G S D Sbjct: 171 DPFGPVHRRA--IAARAMENQMFAVMVNRCGSGDDNLTFAGLSTLVD 215 >gi|323354641|gb|EGA86476.1| Qns1p [Saccharomyces cerevisiae VL3] Length = 714 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 121/594 (20%), Positives = 205/594 (34%), Gaps = 129/594 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + ++ + A +G L + EL I+GY D + Sbjct: 5 ITLATCNLNQWALDFEGNRDRILQSIKIAKERGARLRVGPELEITGYGCLDHFLENDVCL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + G + +G P + N ++ G I+ +R KI L N + Sbjct: 65 HSWEMYAQIIKNKETHGLILDIGXPVLHKNVRYNCRLLSLDGEILFIRPKIWLANDGNYR 124 Query: 125 EKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F ++G + + I D +G CE+++ + Sbjct: 125 EMRFFTPWMKPGVVEDFILPPEIQKVTGQRLVPFGDAVINSLDTCIGTETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFD- 217 + G E + + + S + KL KR +++ +Y NQ G D L +D Sbjct: 185 HIAMSLDGVEIMTNSSGSHHELRKLNKRLDLILNATKRCGGVYLYANQRGCDGDRLYYDG 244 Query: 218 -------------GASFCFDG----------QQQLAFQMKHFSE--QNFMTEWHYDQ--- 249 G+ F D ++ +++ S Q + E + + Sbjct: 245 CALIAINGTIVAQGSQFSLDDVEVVTATVDLEEVRSYRAAVMSRGLQASLAEIKFKRIDI 304 Query: 250 --QLSQWNYMSDDSAST------MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +L+ D + Y +EE A AC + DY+++ N + LSG Sbjct: 305 PVELALMTSRFDPTVCPTKVREPFYHSPEEEIALGPACWMW--DYLRRCNGTGFFLPLSG 362 Query: 302 GIDSALCAAI-------AVDALGKENVQTIMLPYKYT---------SPQSLED------- 338 GIDS A I DA N Q I K T SPQ L Sbjct: 363 GIDSCATAMIVHSMCRLVTDAAQNGNEQVIKDVRKITRSGDDWIPDSPQDLASKIFHSCF 422 Query: 339 -------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 A + A+G + L + LV+ SL ++P Sbjct: 423 MGTENSSKETRNRAKDLSNAIGSYHVDLKMDSLVSSVVSLFEVATGKKPIYKIFGGSQIE 482 Query: 376 GIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +NIQ+R+R + + + N ++L ++N E GY T Y S Sbjct: 483 NLALQNIQARLRMVLSYLFAQLLPWVRGIPNSGGLLVLGSANVDECLRGYLTKYDCSSAD 542 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + KT + + ++ + I L +P+AEL P D Sbjct: 543 INPIGGISKTDLKRFIAYASKQ--------YNMPILNDFLNATPTAELEPMTKD 588 >gi|288555478|ref|YP_003427413.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Bacillus pseudofirmus OF4] gi|288546638|gb|ADC50521.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacillus pseudofirmus OF4] Length = 254 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 22/256 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K KIA+ L G+I N + +A ++A +G + I+ EL +SG Sbjct: 1 MNKRKIAMLHLLLNAGEIKTNQSLITQAVQKAAEKGAEWIITPELAVSGLQFTKECGIDW 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNY 120 Q + + +L + +G P +D EG L NSV +++ + R + Sbjct: 61 IQQQPNEWMSSLMELAKSSAVNLFIGAPEKDPEGELFNSVFVINREGQLIGRQRKRSSVT 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA-SPY 179 ++ SG I ++ GILIC D + N L+ +GAE L + ++ P Sbjct: 121 DDWSS-----SGECLQLITIDHVKAGILICADSYTKENAVT-LRDKGAEILIAPSSWGPG 174 Query: 180 YH--NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF-DGASFCFDGQQQLAFQMKHF 236 H N + I TG LP+ N+ G + + F + S D L + H Sbjct: 175 LHGPNGEWEARTIDTG------LPMFVCNRTGEDETVTFWEAKSLVIDHGVHL---LAHH 225 Query: 237 SEQN--FMTEWHYDQQ 250 S ++ + +W +D++ Sbjct: 226 SRESAILLFDWDFDKR 241 >gi|301114771|ref|XP_002999155.1| glutamine-dependent NAD(+) synthetase, putative [Phytophthora infestans T30-4] gi|262111249|gb|EEY69301.1| glutamine-dependent NAD(+) synthetase, putative [Phytophthora infestans T30-4] Length = 715 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 35/277 (12%) Query: 254 WNYMSDDSASTMYIPLQE-EEADYNACVLSLRDYV---QKNNFHKVIIG----LSGGIDS 305 W+Y+ S ++PL ++ AC++ + ++ NN K +I + G D Sbjct: 350 WDYLRRSGGSGFFLPLSGGADSSSVACIVGVMCHLVVEAANNGDKQVIKDVQRIMGISDQ 409 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH---DLVNHF 362 D L + T + K +S + + AA A +GC + + + D V Sbjct: 410 EYQPLTPAD-LASHILHTTYMGTKNSSAATKKRAATLASEIGCYHLNMGMDMMVDAVVKT 468 Query: 363 FSLMS----QFLQEEPS---GIVAENIQSRIRGNILMALSN-----HSKA---MLLTTSN 407 FSL++ Q+L + + +NIQ+R+R + L+ SK ++L++ N Sbjct: 469 FSLLTGKTPQYLSRGGTLQEDLALQNIQARLRMVMAYLLAQLLPWVRSKTGFLLVLSSGN 528 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 E GY T Y SG NP+ + K + +L W + L ++ E Sbjct: 529 VDEALRGYMTKYDCSSGDLNPIGAVSKGDLKKLLRWAATKYNYPAL--------QTVEEA 580 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFI 504 P+AELRP + E + LD++ + +E F Sbjct: 581 PPTAELRPTDENAEEDADHSQLDEVDMGMTYDELGFF 617 >gi|330814243|ref|YP_004358482.1| NAD synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487338|gb|AEA81743.1| NAD synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 245 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 21/182 (11%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC--KYDV 352 +++G+SGGIDSA+ + I + K V + +P K Q C DV Sbjct: 28 LVVGVSGGIDSAVVSTICAASGFKTFV--LSMPIKQIKEQDDLSKIHCDWLFDNFKNVDV 85 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE-I 411 L I+ ++ F + L + + N ++R+R + L ++ + +++ T NK E Sbjct: 86 LNIN--LDSTFGEFEKTLGKNNNEHAFANTRARLRMSTLYQVAGSNNGIVVGTGNKVEDF 143 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 VG+ T YGD +P+ D KTQV+ + LG I PSI+ +P+ Sbjct: 144 GVGFYTKYGDGGVDISPIADCTKTQVWDMG---------KELG-----INPSIINAAPTD 189 Query: 472 EL 473 L Sbjct: 190 GL 191 >gi|269104465|ref|ZP_06157161.1| NAD synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161105|gb|EEZ39602.1| NAD synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 278 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 50/228 (21%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACAKA 345 +++G+SGG+DS C A +AV+ L KE T + LPY Q ED A A Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEGLNKELNTTDYQFIAVRLPY---GEQQDEDEAQLALQ 96 Query: 346 LGCKYDVLPIHDL-------VNHFFSLMSQFL--------QEEPSGIVAENIQSRIRGNI 390 + P H + VN + L E V N+++R R Sbjct: 97 F-----IQPTHSISINIKTGVNGTHASTLDALDGTGLIPKDEAKVDFVKGNVKARTRMIA 151 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 ++ ++L T + +E G+ T +GD + PL L K QV Q+A+ + Sbjct: 152 QYEVAGLVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRQIAAHLGA---- 207 Query: 451 SGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES-LPPYPILDDIIK 494 P S++ K P+A EL P + D+++ L Y +DD ++ Sbjct: 208 ----------PESLVIKVPTADLEELAPQKADEDALLVSYDQIDDFLE 245 >gi|228470548|ref|ZP_04055405.1| hydrolase, carbon-nitrogen family [Porphyromonas uenonis 60-3] gi|228307675|gb|EEK16651.1| hydrolase, carbon-nitrogen family [Porphyromonas uenonis 60-3] Length = 291 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 24/265 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKS 75 D NI + + + +G +LI+ EL Y ED+ + ++ + Sbjct: 13 DHTNNIHRLQERIRQLAHEGAELIVLQELHNGLYFCQTEDVALFDQAETIPGPSTESFGA 72 Query: 76 DTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG- 132 + G IV+ + G+ N+ V+L+ IA R K+++P+ ++EK F G Sbjct: 73 LARELGVVIVLSLFEKRATGLYHNTAVVLERDGSIAGRYRKMHIPDDPAYYEKFYFTPGD 132 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--SPYYHNKLKKRHEI 190 +PI RLGILIC D W + + +GAE L A + Y +++ +I Sbjct: 133 LGFEPIDTSVGRLGILICWDQWY-PEAARLMALKGAELLIYPTAIGTAAYDTPEEQQRQI 191 Query: 191 VTGQI---SHV---HLPIIYVNQVG------GQDELI-FDGASFCFDGQQQLAFQMKHFS 237 Q+ H +LP+I VN+VG G E I F G SF Q ++ + Sbjct: 192 DAWQLVQRGHAVANNLPVIAVNRVGFEPDPSGVTEGIQFWGHSFVTGQQGEMLCDLSQTE 251 Query: 238 EQNFMTEWHYDQQ---LSQWNYMSD 259 E + E ++ W Y+ D Sbjct: 252 EAGVVVELDLERTELVRRWWPYLRD 276 >gi|77165907|ref|YP_344432.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nitrosococcus oceani ATCC 19707] gi|254434904|ref|ZP_05048412.1| hydrolase, carbon-nitrogen family [Nitrosococcus oceani AFC27] gi|76884221|gb|ABA58902.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nitrosococcus oceani ATCC 19707] gi|207091237|gb|EDZ68508.1| hydrolase, carbon-nitrogen family [Nitrosococcus oceani AFC27] Length = 293 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 22/245 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 LK+AI Q NI + R EA QG LIL EL Y E+ + Sbjct: 3 LKVAIVQ-QVCSQQRQANIGHSIRGIREAAAQGAKLILLPELHTGPYFCQTENTRYFDLA 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNY 120 + + + + G +V+ + G+ N+ V+L+A +A R K+++P+ Sbjct: 62 EPIPGPSTEVFGALAAELGVVLVISLFERRAPGIYHNTAVVLEADGRMAGRYRKMHIPDD 121 Query: 121 SEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F+EK F G PI RLG+L+C D W + + GAE L +A + Sbjct: 122 PGFYEKFYFTPGDLGFTPIDTSVGRLGVLVCWDQW-YPEAARLMALAGAELLLYPSAIGW 180 Query: 180 -YHN----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGASFCFD 224 H+ K +++ +T Q H LP++ N++G + + + F G+SF Sbjct: 181 DSHDDEAEKSRQQEAWITIQRGHAIANSLPLLASNRIGLEPDPSQQTPGIQFWGSSFIAG 240 Query: 225 GQQQL 229 Q +L Sbjct: 241 PQGEL 245 >gi|157691091|ref|YP_001485553.1| cyanide hydratase [Bacillus pumilus SAFR-032] gi|157679849|gb|ABV60993.1| cyanide hydratase [Bacillus pumilus SAFR-032] Length = 261 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 20/240 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q++ +G+ N KA EEA RQ DLI+ E++ +GY E Sbjct: 1 MKIALVQMDVQIGEPDVNFQKAEAFLEEAIRQQPDLIILPEMWNTGYALEQ---ADQLAD 57 Query: 65 ACSSAIDTLKSD-THDGGAGIVVGF---PRQDQEGVLNSVVILD-AGNIIAVRDKINLPN 119 L S H ++ G R + E + N++ I + G ++ DKI+L Sbjct: 58 VNGERTKQLFSSFAHKHQVILIAGSVLNKRTEDEKITNTMYIFNRQGELLVDYDKIHLFR 117 Query: 120 YSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + H T + D + D+++G +IC D+ + + + L +GA+ L +N Sbjct: 118 LMDEHNYLT-----AGDQLCLFDYDEDVKIGAMICYDL-RFPQLSRTLVNKGAKVL--IN 169 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 + + ++ ++ + +I VN+ G + F G S D ++ + H Sbjct: 170 TAQWPSARVDHWRSLLIARAIENQSFMIAVNRTGTSRDTEFPGHSMVIDPLGRILLETNH 229 >gi|326518738|dbj|BAJ92530.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 319 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 20/235 (8%) Query: 6 KIAIAQLNPVVGD-IAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VFKKS 61 ++A+A + D +A N+A A R EA+++G +++L ELF Y + F ++ Sbjct: 25 RVAVAAVQFACTDTVADNVAAAERLIREAHKKGANIVLIQELFEGHYFCQAQRMDFFGRA 84 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 + I ++ + I V F + NSV I+DA G + + K ++P+ Sbjct: 85 KPYKENPTIMRMQKLAKELDVVIPVSFFEEAGNAHYNSVAIIDADGTDLGLYRKSHIPDG 144 Query: 121 SEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNA 176 + EK F G + + +G+ IC D W + + QGAE LF ++ + Sbjct: 145 PGYQEKFYFNPGDTGFKAFKTKYATIGVGICWDQW-FPETARAMVLQGAEILFYPTAIGS 203 Query: 177 SPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 P N + H ++ G +P++ N++G G + F G SF Sbjct: 204 EPQDMNLDSREHWKRVMQGHAGANLVPLVASNRIGKETVETEHGNSTIKFYGNSF 258 >gi|46907023|ref|YP_013412.1| carbon-nitrogen family hydrolase [Listeria monocytogenes serotype 4b str. F2365] gi|46880289|gb|AAT03589.1| hydrolase, carbon-nitrogen family [Listeria monocytogenes serotype 4b str. F2365] gi|328467343|gb|EGF38423.1| carbon-nitrogen family hydrolase [Listeria monocytogenes 1816] Length = 296 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 30/209 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P F+ + Sbjct: 1 MNTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPP---FEDA 57 Query: 62 FIQACSSAID-------------------TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVI 102 F ++ D TLK + GI + + ++ N+ +I Sbjct: 58 FNHPLATDFDNERTKWLNEAITEDSAYFLTLKELAKELKIGICATYLSKTEQKPQNTAII 117 Query: 103 LD-AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICK 161 +D G II K++ +F + SG F I+LG++IC D + + Sbjct: 118 IDRKGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGVMICYDR-EFPESAR 173 Query: 162 HLKKQGAEFLFSLNA---SPYYHNKLKKR 187 L +GAE + NA +P N+L R Sbjct: 174 VLMLKGAEIILVPNACDMNPARLNQLNSR 202 >gi|416866|sp|P32964|CYHY_GLOSO RecName: Full=Cyanide hydratase; AltName: Full=Formamide hydrolyase gi|168197|gb|AAA33353.1| cyanide hydratase [Gloeocercospora sorghi] Length = 368 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 25/204 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 + K K A+ PV ++ G + K EA + G LI F E++I GYP Sbjct: 3 INKYKAAVVTSEPVWENLEGGVVKTIEFINEAGKAGCKLIAFPEVWIPGYPYWMWKVNYL 62 Query: 53 ---PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 P ++++ I SS + +++ D + +G D + L V+I G++ Sbjct: 63 QSLPMLKAYRENSIAMDSSEMRRIRAAARDNQIYVSIGVSEIDHATLYLTQVLISPLGDV 122 Query: 109 IAVRDKINLPNYSEFHEKRTF--ISGYSNDPIVFRDI-RLGILICEDIWKNSN-ICKHLK 164 I R KI P + EK + SG S +P+ +I RLG L C W+N N K L Sbjct: 123 INHRRKIK-PTHV---EKLVYGDGSGDSFEPVTQTEIGRLGQLNC---WENMNPFLKSLA 175 Query: 165 KQGAEFLFSLNASPYYHNKLKKRH 188 E + + A P Y + K+ H Sbjct: 176 VARGEQIH-VAAWPVYPDLSKQVH 198 >gi|255013474|ref|ZP_05285600.1| beta-ureidopropionase [Bacteroides sp. 2_1_7] gi|298376814|ref|ZP_06986769.1| hydrolase, carbon-nitrogen family [Bacteroides sp. 3_1_19] gi|298266692|gb|EFI08350.1| hydrolase, carbon-nitrogen family [Bacteroides sp. 3_1_19] Length = 291 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 21/232 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKS 75 D A NI K + +A R+G +L++ EL Y ED + +T + Sbjct: 13 DRAANIEKLKVNIRKAAREGAELVVLQELHNGLYFCQTEDTSMFDLAETIPGPSTETFGA 72 Query: 76 DTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG- 132 + G +V+ + G+ N+ V+L+ IA + K+++P+ ++EK F G Sbjct: 73 LAKELGIVLVLSLFEKRAPGLYHNTAVVLEKDGTIAGKYRKMHIPDDPAYYEKFYFTPGD 132 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASPYYHNKLKKR 187 +PI RLG+L+C D W + + +GAE L +S K ++ Sbjct: 133 LGFEPIDTSVGRLGVLVCWDQWY-PEAARLMAMRGAEMLIYPTAIGWESSDTQEEKDRQL 191 Query: 188 HEIVTGQISHV---HLPIIYVNQVG------GQDELI-FDGASFCFDGQQQL 229 VT Q H LP+I VN+ G GQ I F G SF Q +L Sbjct: 192 GAWVTIQRGHAVANGLPVISVNRTGHEPDPSGQTGGIRFWGNSFAAGPQGEL 243 >gi|153215154|ref|ZP_01949852.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 1587] gi|124114878|gb|EAY33698.1| NH(3)-dependent NAD(+) synthetase [Vibrio cholerae 1587] gi|327485421|gb|AEA79827.1| NAD synthetase [Vibrio cholerae LMA3894-4] Length = 276 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 50/228 (21%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACAKA 345 +++G+SGG+DS C A +AV+ L +++ T + LPY Q ED A A + Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPY---GEQKDEDEAQLALS 96 Query: 346 LGCKYDVLPIHDL-------------VNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNI 390 + P H + +H + + +P+ I + N+++R R Sbjct: 97 F-----IRPTHSVSVNIKAGVDGLHAASHQALANTGLIPSDPAKIDFIKGNVKARARMVA 151 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 ++ + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 152 QYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLLAKTLGA---- 207 Query: 451 SGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 208 ----------PEQLVYKTPTADLEELAPQKADEAALNLTYEQIDDFLE 245 >gi|150007817|ref|YP_001302560.1| beta-ureidopropionase [Parabacteroides distasonis ATCC 8503] gi|149936241|gb|ABR42938.1| glycosylhydrolase of carbon-nitrogen family, putative beta-ureidopropionase [Parabacteroides distasonis ATCC 8503] Length = 291 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 21/232 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKS 75 D A NI K + +A R+G +L++ EL Y ED + +T + Sbjct: 13 DRAANIEKLKVNIRKAAREGAELVVLQELHNGLYFCQTEDTSMFDLAETIPGPSTETFGA 72 Query: 76 DTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG- 132 + G +V+ + G+ N+ V+L+ IA + K+++P+ ++EK F G Sbjct: 73 LAKELGIVLVLSLFEKRAPGLYHNTAVVLEKDGTIAGKYRKMHIPDDPAYYEKFYFTPGD 132 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASPYYHNKLKKR 187 +PI RLG+L+C D W + + +GAE L +S K ++ Sbjct: 133 LGFEPIDTSVGRLGVLVCWDQWY-PEAARLMAMRGAEMLIYPTAIGWESSDTQEEKDRQL 191 Query: 188 HEIVTGQISHV---HLPIIYVNQVG------GQDELI-FDGASFCFDGQQQL 229 VT Q H LP+I VN+ G GQ I F G SF Q +L Sbjct: 192 GAWVTIQRGHAVANGLPVISVNRTGHEPDPSGQTGGIRFWGNSFAAGPQGEL 243 >gi|297584712|ref|YP_003700492.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Bacillus selenitireducens MLS10] gi|297143169|gb|ADH99926.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacillus selenitireducens MLS10] Length = 264 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 9/243 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K KI I Q++ V GD N AK +D+++ EL+ SGY L + Sbjct: 2 KWKILILQIDVVYGDPWKNKAKIEDKIRNVTMDEVDVLVLPELWSSGYDLSRL--PEICA 59 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILD-AGNIIAVRDKINLPNYS 121 ++ S+ + LK+ + +V G Q G N++ ++D +G + K++L + Sbjct: 60 ESQSAMLAFLKNLALEHDVMVVGGSLADHQNGSYYNTMPVIDRSGEQVKAYSKLHL--FR 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 +E + G + D+ +IC DI + +H + AE F + P H Sbjct: 118 LMNEDKYLSEGTGDGFFTLEDVPCTGMICYDI-RFPEWVRHHALKEAEVFFVVAEWP--H 174 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 ++ ++T + I+ N+VG + +F G S D ++ + E+ Sbjct: 175 ARIDHWTALLTSRAIENQCYIVACNRVGADPDNVFGGTSMVIDPWGKVLLKASEDREEIL 234 Query: 242 MTE 244 M + Sbjct: 235 MID 237 >gi|326403284|ref|YP_004283365.1| putative hydrolase [Acidiphilium multivorum AIU301] gi|325050145|dbj|BAJ80483.1| putative hydrolase [Acidiphilium multivorum AIU301] Length = 266 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 11/188 (5%) Query: 39 DLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN 98 DL++ ELF++GY ++ + I ++ + G + GFP + +GV N Sbjct: 37 DLLVLPELFLTGYNLGAARARELALDPEGEQIGRARALAAEVGIALCFGFPERVGDGVAN 96 Query: 99 SVVILD-AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS 157 S +++D AG + K++L + + + G + +R + LG+ IC DI + Sbjct: 97 SAILIDEAGGARLIYRKVHL--FGDLDRGMFALRGDGFPVVAWRGLSLGLAICYDI-EFP 153 Query: 158 NICKHLKKQGAEFLFSLNA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 + + GA+ + A PYY +V + + I Y N GG+ + Sbjct: 154 ETARMMALAGADLILVPTALMPPYY----VVADSLVPARAYENQVYIAYANHCGGEPGID 209 Query: 216 FDG-ASFC 222 + G +S C Sbjct: 210 YIGHSSIC 217 >gi|297159593|gb|ADI09305.1| Putative hydrolase [Streptomyces bingchenggensis BCW-1] Length = 302 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 10/155 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF--KK 60 + L++A AQ P GD+ N A A EA G +++F E F++GY PE + ++ Sbjct: 10 RPLRVAAAQACPSPGDVVANAATAGAMVREAAEAGARVVVFPEKFLTGYEPELIRGDPER 69 Query: 61 SFIQACSSA-IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR-DKINLP 118 +QA + L + D G +VG D + S +++D+ A R DK L Sbjct: 70 CAVQAGGDERLGPLLTACRDTGTVAIVGAAVHDAGELHVSALVIDSDGGWAARYDKQIL- 128 Query: 119 NYSEFHEKR-TFISGYSNDPIVFRDIRLGILICED 152 F +R + G + + RLG+ IC D Sbjct: 129 ----FRSERDIYRPGRAGCTVEVDGWRLGLGICYD 159 >gi|145296532|ref|YP_001139353.1| NAD synthetase [Corynebacterium glutamicum R] gi|189030356|sp|A4QGT5|NADE_CORGB RecName: Full=NH(3)-dependent NAD(+) synthetase gi|140846452|dbj|BAF55451.1| hypothetical protein [Corynebacterium glutamicum R] Length = 277 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSP 333 L DY++ ++ ++G+SGG DS L A +AV+ + E T + LPY Sbjct: 31 LVDYLRASHAKGFVLGISGGQDSTLAGRLAQLAVERIRAEENSTDYVFYAVRLPYAI--- 87 Query: 334 QSLEDAAACAKALGC--KYDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNI 390 Q+ ED A A K + + D + + ++ L+ E + NI++R R Sbjct: 88 QADEDDAQVALEFIAPDKSVTVNVKDATDATEATVAAALELPELTDFNRGNIKARQRMVA 147 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +++ T + +E G+ T +GD + PL L K R I Sbjct: 148 QYAIAGQYGLLVIGTDHAAENVTGFFTKFGDGAADLLPLAGLSK---------RQGAAIL 198 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINN 506 LG P S K P+A+L RP D+E+L Y +D+ ++ N Sbjct: 199 EHLGA-----PSSTWTKIPTADLEEDRPALPDEEALGVSYADIDN-----------YLEN 242 Query: 507 DQEYNDETVRYVEHLLYGSEYKR 529 + ++ + +EHL ++KR Sbjct: 243 KPDVSEGAQQRIEHLWKVGQHKR 265 >gi|88808351|ref|ZP_01123861.1| probable nitrilase [Synechococcus sp. WH 7805] gi|88787339|gb|EAR18496.1| probable nitrilase [Synechococcus sp. WH 7805] Length = 346 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 24/186 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PEDL 56 + +K+A AQ+ PV+ + G++ + A EA QG+ LI+F E F+ YP + Sbjct: 15 VTTVKVAAAQIRPVLFSLDGSLQRVLDAMAEAAAQGVQLIVFPETFLPYYPYFSFVESPV 74 Query: 57 VFKKSFIQACSSAI-------DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNI 108 + +S + A+ D + + G +++G +D+ + N+ ++ ++ G + Sbjct: 75 LMGRSHLALYEQAVVVPGPVTDAVGAAARQHGMQVLLGVNERDRGTLYNTQLLFNSCGEL 134 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKH--LK 164 + R KI P Y HE+ + G + V R+G L C W++ N L Sbjct: 135 VLKRRKIT-PTY---HERMVWGQGDGSGLKVVPTPLARVGALAC---WEHYNPLARYALM 187 Query: 165 KQGAEF 170 QG E Sbjct: 188 AQGEEI 193 >gi|296084900|emb|CBI28309.3| unnamed protein product [Vitis vinifera] Length = 297 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 21/223 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKKSFIQACSSAIDTL 73 D+ N+ A R +A+R+G ++IL ELF Y ED F+++ I + Sbjct: 19 DVPTNLNTAERLVRDAHRKGANIILIQELFEGYYFCQAQREDF-FQRAKPYKGHPTILRM 77 Query: 74 KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG 132 + + G I V F + NS+ I+DA G + + K ++P+ + EK F G Sbjct: 78 QKLAKELGVVIPVSFFEEANNAHYNSIAIVDADGTDLGIYRKSHIPDGPGYQEKFYFNPG 137 Query: 133 YSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRH 188 + + + ++G+ IC D W + + QGAE L ++ + P H Sbjct: 138 DTGFKVFETKFAKIGVAICWDQW-FPEAARAMVLQGAEILLYPTAIGSEPQDTGLDSCDH 196 Query: 189 --EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 ++ G +P++ N++G G E+ F G SF Sbjct: 197 WKRVMQGHAGANLVPLVASNRIGKEIIQTEHGNTEITFYGNSF 239 >gi|188535515|ref|YP_001909312.1| Putative hydrolase [Erwinia tasmaniensis Et1/99] gi|188030557|emb|CAO98452.1| Putative hydrolase [Erwinia tasmaniensis Et1/99] Length = 299 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 7/154 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF--K 59 + KLK+A+AQ PV GDI N+ ++ E A G +IL E F+SGY P + Sbjct: 23 VNKLKVAVAQAEPVAGDIPANVQQSVSLIERAAEWGAKVILLPEKFLSGYEPALIQADPA 82 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLP 118 + I A + + G ++G + GV + S+ G + A K L Sbjct: 83 RYAIGADDQRLKPIAEACRQAGIFAIIGAATCEDTGVCITSLCFNPEGELFARYHKRALF 142 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 + E F G I LG+ IC D Sbjct: 143 S----SEAEFFQPGQQAVAIEVEGWSLGLAICYD 172 >gi|326567614|gb|EGE17727.1| NAD+ synthetase [Moraxella catarrhalis 12P80B1] Length = 39 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 20/29 (68%), Positives = 24/29 (82%) Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISN 553 +EYKRRQ +GTKIT KSFGR+R YP+ N Sbjct: 5 AEYKRRQGAIGTKITKKSFGRERRYPLVN 33 >gi|302686016|ref|XP_003032688.1| hypothetical protein SCHCODRAFT_67311 [Schizophyllum commune H4-8] gi|300106382|gb|EFI97785.1| hypothetical protein SCHCODRAFT_67311 [Schizophyllum commune H4-8] Length = 709 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 126/589 (21%), Positives = 210/589 (35%), Gaps = 132/589 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN+ + + A +G + + EL I GY D + Sbjct: 5 ITLATCSLNQWALDFEGNLERILTSIRIAKERGATMRVGPELEIPGYGCYDHFLEGDTEL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A+ + S D GIV +G P + N ++ I+ +R K+ L N Sbjct: 65 HSWEALQKILSS--DATVGIVCDIGMPVTHKSVTYNCRIVCYDKKILLIRPKMWLANDGN 122 Query: 123 FHEKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNS 157 + E R F ++G + + I D +G+ +CE+++ + Sbjct: 123 YRELRYFTPWQKHRQTDDHYLPRIIQDVTGQIKVPFGDAVISTLDTCIGVELCEELFTPA 182 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIF 216 + + G E + + S + KL +R E++ +Y NQ G D L + Sbjct: 183 SPHILMGLDGVEIFTNSSGSHHELRKLYRRVELIKEATLKTGGIYLYANQQGCDGDRLYY 242 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFM----------TEWHYDQQLSQWNY---------- 256 DG + +A Q FS + H ++S W Sbjct: 243 DGCPLIAVNGEIVA-QGTQFSLDDVQVVSATIDVEDVRAHRHGKMS-WGMQASGAERYQR 300 Query: 257 ------MSDDSASTMY---IPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +S D S + IP+ +EE A AC L DY++++ + LSGG Sbjct: 301 IEVNFALSGDDLSILQSTKIPIRYHKPEEEIALGPACWLW--DYLRRSRAQGFFLPLSGG 358 Query: 303 IDSALCAAI-------AVDALGKENVQTI-----------------MLPYKY-------- 330 IDS A I V+ + + Q I P+++ Sbjct: 359 IDSCATAVIVYSMCRLVVEKAKEGDPQVIADARRISGEPESSTYIPTSPHEFANRVFHTC 418 Query: 331 ------TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS-------QFLQ---EEP 374 +S ++ E A +ALG + L + LV +L QF E Sbjct: 419 YMGTENSSQETRERAKHLGEALGSYHLDLNMDTLVTAVRTLFGFVTGRKPQFRAHGGSEA 478 Query: 375 SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSGGF 426 + +NIQ+R+R +L + +L L ++N E GY T Y S Sbjct: 479 ENLALQNIQARLRMVLAYLFAQLLPWVRGRQGGLLVLGSANVDEALRGYLTKYDCSSADI 538 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 NP+ + KT + + ++ P+ E S L P+AEL P Sbjct: 539 NPIGGVSKTDLKKFIAFAQEKFDL----PILE----SFLTAVPTAELEP 579 >gi|295703359|ref|YP_003596434.1| NAD+ synthetase [Bacillus megaterium DSM 319] gi|294801018|gb|ADF38084.1| NAD+ synthetase [Bacillus megaterium DSM 319] Length = 276 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 39/231 (16%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+ K F ++G+SGG DS L A +AV+ L G+E Q + LPY + Sbjct: 31 LKSYMNKYPFLRSFVLGISGGQDSTLTGKLAQLAVNELNEEAGEERYQFIAVRLPYGVQA 90 Query: 333 PQSLEDAAACAKALG----CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 D A C AL K + + V+ S + + ++ S N+++R R Sbjct: 91 -----DEADCQDALAFIQPTKSISINVKPAVDAMLSAVEEAADDKVSDFNKGNVKARERM 145 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 ++ ++L T + +E G+ T +GD P+ L K Q Q+ Sbjct: 146 IAQYTVAGMYSGVVLGTDHSAEAVTGFYTKFGDGGADLVPIFRLNKRQGKQM-------- 197 Query: 449 ITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L E+ P + K P+A+L RP D+E+L Y +DD ++ Sbjct: 198 -------LKELGCPEHLYMKKPTADLEEDRPQLPDEEALGVTYEQIDDYLE 241 >gi|294498006|ref|YP_003561706.1| NAD+ synthetase [Bacillus megaterium QM B1551] gi|294347943|gb|ADE68272.1| NAD+ synthetase [Bacillus megaterium QM B1551] Length = 276 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 39/231 (16%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+ K F ++G+SGG DS L A +AV+ L G+E Q + LPY + Sbjct: 31 LKSYMNKYPFLRSFVLGISGGQDSTLTGKLAQLAVNELNEEAGEERYQFIAVRLPYGVQA 90 Query: 333 PQSLEDAAACAKALG----CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 D A C AL K + + V+ S + + ++ S N+++R R Sbjct: 91 -----DEADCQDALAFIQPTKSISINVKPAVDAMLSAVEEAADDKVSDFNKGNVKARERM 145 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 ++ ++L T + +E G+ T +GD P+ L K Q Q+ Sbjct: 146 IAQYTVAGMYSGVVLGTDHSAEAVTGFYTKFGDGGADLVPIFRLNKRQGKQM-------- 197 Query: 449 ITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L E+ P + K P+A+L RP D+E+L Y +DD ++ Sbjct: 198 -------LKELGCPEHLYMKKPTADLEEDRPQLPDEEALGVTYEQIDDYLE 241 >gi|228998820|ref|ZP_04158406.1| Carbon-nitrogen hydrolase [Bacillus mycoides Rock3-17] gi|229006335|ref|ZP_04164019.1| Carbon-nitrogen hydrolase [Bacillus mycoides Rock1-4] gi|228754981|gb|EEM04342.1| Carbon-nitrogen hydrolase [Bacillus mycoides Rock1-4] gi|228760995|gb|EEM09955.1| Carbon-nitrogen hydrolase [Bacillus mycoides Rock3-17] Length = 281 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 11/224 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K+K+A Q++ GD+ NI ++ EA ++ D+I+ EL+ +GY DL Sbjct: 22 KMKVACIQMDIAFGDVNTNIENTKKKIGEAMQRKPDVIVLPELWTTGY---DLKRLPEIA 78 Query: 64 QACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNY 120 L S+ A +VG +Q ++GV N++ +++ G + K++L + Sbjct: 79 DEGGIQTKELLSEWAKQFAVNIVGGSVAKQTKQGVTNTMYVVNREGEVQNEYSKVHL--F 136 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E + I+G D++ G IC DI I H + GA LF + P Sbjct: 137 QLMGEHKYLIAGDGTGEFTLDDVQCGGTICYDIRFPEWIRVHTVR-GANVLFVVAEWPLV 195 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G + +F G S D Sbjct: 196 --RLAHWRLLLQARAVENQCYVVACNRAGEDPDNMFAGHSLIVD 237 >gi|225464926|ref|XP_002274913.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 311 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 21/223 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKKSFIQACSSAIDTL 73 D+ N+ A R +A+R+G ++IL ELF Y ED F+++ I + Sbjct: 33 DVPTNLNTAERLVRDAHRKGANIILIQELFEGYYFCQAQREDF-FQRAKPYKGHPTILRM 91 Query: 74 KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG 132 + + G I V F + NS+ I+DA G + + K ++P+ + EK F G Sbjct: 92 QKLAKELGVVIPVSFFEEANNAHYNSIAIVDADGTDLGIYRKSHIPDGPGYQEKFYFNPG 151 Query: 133 YSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRH 188 + + + ++G+ IC D W + + QGAE L ++ + P H Sbjct: 152 DTGFKVFETKFAKIGVAICWDQW-FPEAARAMVLQGAEILLYPTAIGSEPQDTGLDSCDH 210 Query: 189 --EIVTGQISHVHLPIIYVNQVG--------GQDELIFDGASF 221 ++ G +P++ N++G G E+ F G SF Sbjct: 211 WKRVMQGHAGANLVPLVASNRIGKEIIQTEHGNTEITFYGNSF 253 >gi|288802695|ref|ZP_06408133.1| hydrolase, carbon-nitrogen family [Prevotella melaninogenica D18] gi|288334845|gb|EFC73282.1| hydrolase, carbon-nitrogen family [Prevotella melaninogenica D18] Length = 294 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 106/252 (42%), Gaps = 24/252 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 +++LKI Q + V DI NI + ++G +L++ EL S Y ED V K Sbjct: 1 MRELKIGFLQQHKVE-DIKNNIERLAEGITNLAQRGAELVILQELHNSLYFCQTED-VNK 58 Query: 60 KSFIQACSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKIN 116 + + + G IV + G+ + +VVI G+I K++ Sbjct: 59 FDLAETIPGPSTGFYGELARELGIVIVTSLFEKRAPGLYHNTAVVIEKDGSIAGKYRKMH 118 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ ++EK F G PI RLG+L+C D W + + QGA+ L Sbjct: 119 IPDDPAYYEKFYFTPGDLGFHPIDTSVGRLGVLVCWDQWY-PEAARLMALQGADMLIYPT 177 Query: 176 ASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGAS 220 A Y K ++R T H LP+I VN+VG + + + F G+S Sbjct: 178 AIGYESSDTDEEKQRQREAWTTVMRGHAVANGLPVIAVNRVGHEPDPSEQTQGIQFWGSS 237 Query: 221 FCFDGQQQLAFQ 232 F Q +L ++ Sbjct: 238 FVAGPQGELLYR 249 >gi|260585099|ref|ZP_05852840.1| NAD+ synthetase [Granulicatella elegans ATCC 700633] gi|260157187|gb|EEW92262.1| NAD+ synthetase [Granulicatella elegans ATCC 700633] Length = 275 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 36/248 (14%) Query: 277 NACVLSLRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ------TIML 326 N + L++Y+ K+ F K ++G+SGG DS L A +A+D L +E + + L Sbjct: 25 NRTIQFLKEYLVKHPFLKGYVLGISGGQDSTLAGKLAQLAIDELNQEYPEKDYRFYAVRL 84 Query: 327 PYKYTSPQS-LEDAAACAKALG-CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 PY + + DA +A + D+ P D + + + + + G NI++ Sbjct: 85 PYGIQADEKDAMDAIEFMQASDILRVDIKPAVDASMNSITSLGLPISDFNKG----NIKA 140 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R R A++ + ++ T + +E G+ T +GD PL L K Q QL + Sbjct: 141 RERMIAQYAIAGQTGCAVIGTDHAAESVTGFYTKFGDGGADILPLWRLNKRQGRQLLEYL 200 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVE 498 + P + K P+A+L RP D+ +L Y +DD + K I E Sbjct: 201 GA--------------PEHLYLKQPTADLEEERPSLPDEVALGVTYEAIDDYLEGKEIAE 246 Query: 499 NEESFINN 506 + I N Sbjct: 247 KDAQTIEN 254 >gi|116204107|ref|XP_001227864.1| hypothetical protein CHGG_09937 [Chaetomium globosum CBS 148.51] gi|88176065|gb|EAQ83533.1| hypothetical protein CHGG_09937 [Chaetomium globosum CBS 148.51] Length = 336 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 16/148 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PE 54 M+ +++A+ Q PV D++ +I KA R +A G L+ F E ++ GYP P Sbjct: 1 MVTPIRVAVIQSEPVYLDLSASIDKACRLIADAAEDGAKLVAFPECWLPGYPAWIWARPV 60 Query: 55 DLVFKKSF----IQACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNI 108 D+ + + + S A+D +K+ + +V+GF Q ++ +I G + Sbjct: 61 DVELQTRYTYNALPVHSPAMDLVKAAAREQSIAVVLGFAEQSASHSVYISQAIISPQGEL 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSND 136 + R KI P + E+ F G D Sbjct: 121 LLHRRKIK-PTH---MERTVFGDGSGGD 144 >gi|192292235|ref|YP_001992840.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris TIE-1] gi|192285984|gb|ACF02365.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris TIE-1] Length = 557 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 9/177 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++ + A Q +GD NIA A R E+A RQG +LI+F E +GY + + Sbjct: 4 RRFRAAAVQTLAKLGDFEFNIALATRYVEDAVRQGAELIVFPECMDTGYLFDSPEHCREL 63 Query: 63 IQACSSA--IDTLKSDTHDGGAGIVVGFPRQD--QEGVLNSVVILDAGNIIAVRDKINLP 118 + + + L + + G I G D ++ + N+ ++ D +A Sbjct: 64 AETLTDGPFVKALAALSRKHGVYIASGITEWDPAKQKIFNTGIMFDRQGEVACHYH---K 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 + H++ F G P+V D+ ++G+LIC D + I + + QGAE + + Sbjct: 121 QFLATHDQNWFAFGERGCPVVDTDLGKIGLLICFD-GRIPEIFRAMTMQGAEVIVDM 176 >gi|329849478|ref|ZP_08264324.1| N-carbamoylputrescine amidase [Asticcacaulis biprosthecum C19] gi|328841389|gb|EGF90959.1| N-carbamoylputrescine amidase [Asticcacaulis biprosthecum C19] Length = 289 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 23/275 (8%) Query: 7 IAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSF 62 + +A L G D+A NI + +A QG +IL +ELF Y E+ F ++ Sbjct: 1 MKVAALQTAYGADMAANIVRTAALVRDAAAQGAQIILPSELFQGEYFCVTQEERWFATAY 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 A+ ++ + I ++ NS+V++DA G+++ + K ++P+ Sbjct: 61 PWRTHPAVLAMQKLAAELNVVIPTSIYEKEGPHYYNSLVVIDAGGDLLGLYRKSHIPDGP 120 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNAS 177 + EK F G + + + R+G+ IC D W + + GAE LF ++ + Sbjct: 121 GYQEKYYFRPGDTGFKVWDTKFARIGVGICWDQWY-PEAARGMALLGAEVLFYPTAIGSE 179 Query: 178 PY--YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL--------IFDGASFCFDGQQ 227 P+ + ++ G +P++ N++G + + F G SF + + Sbjct: 180 PHDDSLDTAAPWQRVMQGHAVANVIPVVASNRIGTESLISPQNGAGQTFYGHSFIANNRG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSD 259 L E + E+ D + W + D Sbjct: 240 DLVRSFGATEEGVLVAEFDLDYLNTHRAAWGFFRD 274 >gi|331701851|ref|YP_004398810.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus buchneri NRRL B-30929] gi|329129194|gb|AEB73747.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus buchneri NRRL B-30929] Length = 275 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 37/233 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIA-------VDALGKE 319 P + +A+ V L+DY++K +F K +++G+SGG DS L +A D G Sbjct: 16 PTIDPKAEIRRSVDFLKDYLKKFSFLKTLVLGISGGQDSTLAGKLAQLAISELRDETGDP 75 Query: 320 NVQ--TIMLPYKYTSPQSLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEE 373 + Q + LPY + +S DA K + + D+ P D S+ + + E Sbjct: 76 DYQFIAVRLPYGVQADES--DALEAIKWMDADVVARVDIKPAVDAA--VASVEANDI--E 129 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R A++ ++ T + +E G+ T +GD + PL L Sbjct: 130 VADFNKGNIKARQRMIAQYAIAGAKSGAVVGTDHAAEAVTGFYTKFGDGAADITPLWRLD 189 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 K Q QL + P + +K+P+A+L RP D+ +L Sbjct: 190 KEQGKQLLKLLGA--------------PEHLYQKTPTADLEDNRPALPDEVAL 228 >gi|148259748|ref|YP_001233875.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Acidiphilium cryptum JF-5] gi|146401429|gb|ABQ29956.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Acidiphilium cryptum JF-5] Length = 266 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 11/188 (5%) Query: 39 DLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN 98 DL++ ELF++GY ++ + I ++ + G + GFP + +GV N Sbjct: 37 DLLVLPELFLTGYNLGAARARELALDPEGEQIGRARALAAEVGIALCFGFPERVGDGVAN 96 Query: 99 SVVILD-AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS 157 S +++D AG + K++L + + + G + +R + LG+ IC DI + Sbjct: 97 SAILIDEAGGARLIYRKVHL--FGDLDRGMFALPGDGFPVVAWRGLSLGLAICYDI-EFP 153 Query: 158 NICKHLKKQGAEFLFSLNA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 + + GA+ + A PYY ++ + + I Y N GG+ + Sbjct: 154 ETARMMALAGADLILVPTALMPPYY----VVADSLIPARAYENQVYIAYANHCGGEPGID 209 Query: 216 FDG-ASFC 222 + G +S C Sbjct: 210 YIGHSSIC 217 >gi|172058032|ref|YP_001814492.1| NAD synthetase [Exiguobacterium sibiricum 255-15] gi|226724350|sp|B1YJ94|NADE_EXIS2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|171990553|gb|ACB61475.1| NAD+ synthetase [Exiguobacterium sibiricum 255-15] Length = 271 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 45/265 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQ-- 322 P+ + E + V L++Y+ +++G+SGG DS+L IAV+ L E + Sbjct: 13 PVIDAEEEIKQRVQFLKEYLVHTGAKGLVLGISGGQDSSLAGRLCQIAVEELRSETNRDY 72 Query: 323 ---TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH----DLVNHFFSLMSQFLQEEPS 375 + LPY Q E A A + + P H D+ + M+ F E+ + Sbjct: 73 QFYAVRLPY---GQQQDESDAQLALSF-----IRPDHALRVDIKPAVAASMASF--EQAT 122 Query: 376 GIVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 G V N ++R R + ++ H +++ T + +E G+ T +GD + PL Sbjct: 123 GDVLSDFSKGNTKARERMKVQYDIAAHYGCLVVGTDHAAEFVTGFYTKHGDGACDLTPLT 182 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PY 486 L K Q QL + P ++EK P+A+L +P D+++L Y Sbjct: 183 GLNKRQGKQLLRQLQA--------------PEGLIEKVPTADLEDNQPGLPDEQALGMTY 228 Query: 487 PILDDIIKRIVENEESFINNDQEYN 511 +DD ++ + ES + +Y Sbjct: 229 NEIDDYLEGKTISAESQAKLEAQYK 253 >gi|19553732|ref|NP_601734.1| NAD synthetase [Corynebacterium glutamicum ATCC 13032] gi|62391373|ref|YP_226775.1| NAD synthetase [Corynebacterium glutamicum ATCC 13032] gi|25090737|sp|Q8NMN7|NADE_CORGL RecName: Full=NH(3)-dependent NAD(+) synthetase gi|21325306|dbj|BAB99927.1| NAD synthase [Corynebacterium glutamicum ATCC 13032] gi|41326714|emb|CAF21196.1| NAD-SYNTHETASE [Corynebacterium glutamicum ATCC 13032] Length = 277 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQT------IMLPYKYTSP 333 L DY++ ++ ++G+SGG DS L +AV+ + E T + LPY Sbjct: 31 LVDYLRASHTKGFVLGISGGQDSTLAGRLTQLAVERIRAEENSTDYVFYAVRLPYAI--- 87 Query: 334 QSLEDAAACAKALGC--KYDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNI 390 Q+ ED A A K + + D + + ++ L+ E + NI++R R Sbjct: 88 QADEDDAQVALEFIAPDKSVTVNVKDATDATEATVAAALELPELTDFNRGNIKARQRMVA 147 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +++ T + +E G+ T +GD + PL L K R I Sbjct: 148 QYAIAGQLGLLVIGTDHAAENVTGFFTKFGDGAADLLPLAGLSK---------RQGAAIL 198 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINN 506 LG P S K P+A+L RP D+E+L Y +D+ ++ N Sbjct: 199 EHLGA-----PSSTWTKVPTADLEEDRPALPDEEALGVSYADIDN-----------YLEN 242 Query: 507 DQEYNDETVRYVEHLLYGSEYKR 529 + +++ + +EHL ++KR Sbjct: 243 KPDVSEKAQQRIEHLWKVGQHKR 265 >gi|259047513|ref|ZP_05737914.1| NH(3)-dependent NAD(+) synthetase [Granulicatella adiacens ATCC 49175] gi|259035704|gb|EEW36959.1| NH(3)-dependent NAD(+) synthetase [Granulicatella adiacens ATCC 49175] Length = 275 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 40/270 (14%) Query: 273 EADYNACVLSLRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPY 328 E + V L+ Y+ K+ F + ++G+SGG DS L A +A++ L +E Q + Y Sbjct: 21 EEEIRKTVDFLKAYLVKHPFLNGYVLGISGGQDSTLAGKLAQMAINELNEEQDQKVYRFY 80 Query: 329 KYTSP---QSLEDAAACAKALGCKYDVLPIH--DLVNHFFSLMSQFLQEEPSGIVAENIQ 383 P Q+ E A A A DVL ++ D V+ + + L E S NI+ Sbjct: 81 AVRLPYGVQADEQDAMDAIAFMKATDVLRVNVKDAVDASERSIEE-LGMEISDFNKGNIK 139 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R R A++ + ++ T + +E G+ T +GD + PL L K Sbjct: 140 ARERMVAQYAIAGQTGCAVIGTDHAAESVTGFYTKFGDGAADITPLWRLNK--------- 190 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVEN 499 R + LG P + K P+A+L RP D+ +L Y +DD ++ Sbjct: 191 RQGRAMLQVLGA-----PEHLYLKVPTADLEEDRPSMPDEVALGVTYEEIDDYLE----- 240 Query: 500 EESFINNDQEYNDETVRYVEHLLYGSEYKR 529 ++ N++ +E+ +E+KR Sbjct: 241 -------GKDINEKAAETIENWYRKTEHKR 263 >gi|169627586|ref|YP_001701235.1| hypothetical protein MAB_0482c [Mycobacterium abscessus ATCC 19977] gi|169239553|emb|CAM60581.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 306 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 10/149 (6%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 A QL V+GD+A N+ K + EA R G +I E F +G D + + + Sbjct: 5 AAIQLEAVIGDVAANLGKCAQLAAEAGRAGAKIIALPEFFTTGI-AFDPALRDAALPPEG 63 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +A + L++ H A + F +D++G V N+ DA ++ DK +LP E Sbjct: 64 AATELLRTLAHHYDALVGGSFLCRDKDGHVRNAYFAADATGMVGRHDK-DLPT---MWEN 119 Query: 127 RTFISGYSNDPIVFR--DIRLGILICEDI 153 +I G D VFR + +G +C ++ Sbjct: 120 AFYIGG--QDDGVFRAGTLNVGAAVCWEL 146 >gi|327198316|ref|YP_004306890.1| QueC [Streptococcus phage Dp-1] gi|314912618|gb|ADT64009.1| QueC [Streptococcus phage Dp-1] Length = 228 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 34/62 (54%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++ LSGG+DSA C AI VD G +NV I Y LE+AA A G K+ +L Sbjct: 2 KSVVLLSGGVDSATCLAIEVDKWGSKNVHAIAFNYGQKHEAELENAANVAMFYGVKFTIL 61 Query: 354 PI 355 I Sbjct: 62 EI 63 >gi|312134550|ref|YP_004001888.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor owensensis OL] gi|311774601|gb|ADQ04088.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor owensensis OL] Length = 238 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 9/186 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+ + +I N+ K + EEA + +DLI F E+ ++GY + L+ Sbjct: 1 MKVGVVQMK-ISNNIENNLLKIAKFLEEAKVEEVDLICFPEMALTGYNIQ-LLKSMDLND 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+D + V+G P +++EG+ N I+ DK+ Y Sbjct: 59 VILPAVDKISQLAGKYSICCVIGHPFREREGLKNRASIIFPDGRHEKYDKL----YPTEL 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EK+ F +G ++ R GI IC D +I K K + + +F L A +Y+N Sbjct: 115 EKKIFSNGKGTLVFEYKHKRFGIAICRD-QNFYDIFKEYKDKSCDGVFILAA--HYYNPK 171 Query: 185 KKRHEI 190 + R +I Sbjct: 172 EARWKI 177 >gi|237752525|ref|ZP_04583005.1| hydrolase [Helicobacter winghamensis ATCC BAA-430] gi|229376014|gb|EEO26105.1| hydrolase [Helicobacter winghamensis ATCC BAA-430] Length = 291 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 24/183 (13%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 +VV + G+I K+++P+ F+EK F G +PI+ +LG+L+C D W Sbjct: 97 TAVVFENDGSIAGKYRKMHIPDDPGFYEKFYFAPGDLGFEPILTSLGKLGVLVCWDQW-Y 155 Query: 157 SNICKHLKKQGAEFLFSLNASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQV 208 + + +GAE L A ++ K ++R + Q H +P++ +N+V Sbjct: 156 PEAARIMALKGAEILIYPTAIGWFDVDSKEEKERQRKAWIAVQRGHSVANGIPVVAINRV 215 Query: 209 GGQ-------DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNY 256 G + D + F G+SF + Q +L E+ EW D++ S+ W + Sbjct: 216 GFERDSSGVIDGIRFWGSSFAYGAQGELLALGSVEKEEILYFEW--DKKRSEDVRRIWPF 273 Query: 257 MSD 259 + D Sbjct: 274 LRD 276 >gi|256827670|ref|YP_003151629.1| exsB protein [Cryptobacterium curtum DSM 15641] gi|256583813|gb|ACU94947.1| exsB protein [Cryptobacterium curtum DSM 15641] Length = 240 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 2/105 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 H +++ SGG+DS C A+AVD G+ NV T+ Y + L+ AAA A+ G + V Sbjct: 14 HALVLS-SGGVDSTTCLALAVDRFGQANVSTVSFFYGQRHSRELDAAAAVAEHYGVHHYV 72 Query: 353 LPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 L + ++++ +LM+ Q P G A+ ++ N + N Sbjct: 73 LDLASVMHYSNNALMATSTQHVPHGSYAQQMEDDGHPNTYVPFRN 117 >gi|134034945|gb|ABO46008.1| nitrilase [Rhodococcus rhodochrous] Length = 366 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 22/163 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV------- 57 K+A Q PV D A + K EA R G +L+ F E+FI GYP V Sbjct: 8 FKVAAVQAQPVWFDAAKTVDKTVSIIAEAARNGCELVAFPEVFIPGYPYHIWVDSPLAGM 67 Query: 58 ------FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIA 110 + ++ + S + L D +VVG +D + + +I+DA G ++A Sbjct: 68 AKFAVRYHENSLTMDSPHVQRLLDAARDHNIAVVVGISERDGGSLYMTQLIIDADGQLVA 127 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILIC 150 R K+ P + E+ + G +D V+ D+ RLG L C Sbjct: 128 RRRKLK-PTHV---ERSVYGEGNGSDISVY-DMPFARLGALNC 165 >gi|307725934|ref|YP_003909147.1| NAD+ synthetase [Burkholderia sp. CCGE1003] gi|307586459|gb|ADN59856.1| NAD+ synthetase [Burkholderia sp. CCGE1003] Length = 286 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 42/233 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-------ENVQTIMLPYKYTSPQS 335 L DY++ N ++G+SGG+DS +A A+ + + + LP+ Sbjct: 36 LADYLRSNGLKTYVLGISGGVDSTTAGRLAQLAMERLRGDSYDAHFVAVRLPHG-----E 90 Query: 336 LEDAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQ---FLQEEPSGIVAENIQSR 385 +D A +AL D+ P D + SL F E V NI++R Sbjct: 91 QKDEADAQQALAFIRADETLTIDIKPAADAM--LASLRQSGLPFSDEAQEDFVHGNIKAR 148 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R A+++ +++ T + +E +G+ T +GD PL L K +V Sbjct: 149 QRMIAQYAVASTRAGVVIGTDHAAESLMGFFTKFGDGGADVLPLAGLNKRRV-------- 200 Query: 446 SHGITSGLG---PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 + LG L +P + LE LRP + D+++ PY +DD ++ Sbjct: 201 -RAVAKALGASDALAYKVPTADLEA-----LRPQRPDEDAYGVPYETIDDFLE 247 >gi|323530293|ref|YP_004232445.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. CCGE1001] gi|323387295|gb|ADX59385.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. CCGE1001] Length = 296 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 7/155 (4%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++L IA Q+ P +G N+A+ R E A QG L++ EL +GY D S Sbjct: 12 EELVIACVQMEPHIGAKRANVARLIRHVETAASQGASLVVLPELATTGYVFADREEAFSL 71 Query: 63 IQACSSA-IDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + L +DT G IV G + + + NS +I I + K++L N Sbjct: 72 AEGLPDGETSELFADTAQRLGVHIVTGIAERAGKRLYNSALITGPSGHIGIYRKLHLWN- 130 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIW 154 +E R F G P+ + R+ I IC D W Sbjct: 131 ---NENRFFEPGDRGVPVFGTPLGRIAIAICYDGW 162 >gi|228974118|ref|ZP_04134688.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980710|ref|ZP_04141015.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis Bt407] gi|228778879|gb|EEM27141.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis Bt407] gi|228785458|gb|EEM33467.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 252 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 13/217 (5%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSFIQACSSA 69 ++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + ++ Sbjct: 1 MDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDGVETKEKL 60 Query: 70 IDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNYSEFHEKR 127 I+ K D H G I +Q ++GV N++ V+ + G ++ K++L + E + Sbjct: 61 IEWAKQYDVHIVGGSIA----KQTEQGVTNTMYVVNNEGQLVNEYSKVHL--FQLMDEHK 114 Query: 128 TFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 I+G D+ IC DI + H K GA+ LF + P +L Sbjct: 115 YLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV--RLAHW 171 Query: 188 HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++ + ++ N+ G +F G S D Sbjct: 172 RLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 208 >gi|300932702|ref|ZP_07147958.1| NAD synthetase [Corynebacterium resistens DSM 45100] Length = 296 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 112/277 (40%), Gaps = 59/277 (21%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIM-LPYKYTSPQSLED 338 L DY++K ++G+SGG DS L A +AVD +E + + TSP S Sbjct: 36 LVDYLRKTGAKGFVLGISGGQDSTLAGKLAQMAVDQFNQEQAEKAAEVAASSTSPLS--- 92 Query: 339 AAACAKALGCKYD---------------------VLPIHDLVNHFFSLMSQFLQ-EEPSG 376 A A A+ Y V+ I + + ++ L E S Sbjct: 93 APATFVAVRLPYGEQADENDAQIALRFIEPSESVVINIKNATDAMARDAAEALGIREVSD 152 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 NI++R R A++ +++ T + +E G+ T +GD + PL L K+Q Sbjct: 153 FNKGNIKARQRMIAQYAIAGQRGLLVIGTDHAAEAVTGFYTKHGDGAADVVPLAGLTKSQ 212 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDI 492 + LG P S +K P+A+L RP D+E+L Y +D Sbjct: 213 ---------GAALLRVLG-----APDSTWQKVPTADLEENRPALPDEEALGVRYADID-- 256 Query: 493 IKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 +++ +Q +DE +EHL + S +KR Sbjct: 257 ---------AYLQGEQ-VSDEAAACIEHLWFVSRHKR 283 >gi|329769983|ref|ZP_08261379.1| NH(3)-dependent NAD(+) synthetase [Gemella sanguinis M325] gi|328837501|gb|EGF87129.1| NH(3)-dependent NAD(+) synthetase [Gemella sanguinis M325] Length = 273 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 51/265 (19%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDALGKENVQT--------IMLPYKYTSP 333 L+DY++KN+F +++G+SGG DS LC + A+ + +T + LPY Sbjct: 30 LKDYLKKNDFLETLVLGISGGQDSTLCGKLCQMAITELREETGRDYKFIAVRLPY----- 84 Query: 334 QSLEDAAACAKALGC----KYDVLPIHDLVNHFF-SLMSQFLQEEPSGIVAENIQSRIRG 388 + D A C AL K + I + V+ SL + + S N ++R R Sbjct: 85 GTQFDEADCNDALNFIQPDKVYTVNIKNAVDASVESLKAAGIA--ISDFAKGNEKARERM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + +++ +K +++ T + +E G+ T YGD PL L K Q L N Sbjct: 143 KVQYSIATMNKGIVVGTDHAAEAITGFYTKYGDGGVDIVPLYRLNKRQGKALLKELNC-- 200 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 P + K P+A+L RP D+ +L Y +DD ++ Sbjct: 201 ------------PEHLYLKKPTADLEEDRPALADEVALGVTYDNIDDYLE---------- 238 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKR 529 +E +E + +E SE+KR Sbjct: 239 --GREVPEEAKKIIETHYIKSEHKR 261 >gi|317051350|ref|YP_004112466.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfurispirillum indicum S5] gi|316946434|gb|ADU65910.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfurispirillum indicum S5] Length = 295 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 25/184 (13%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+L+ G+I K+++P+ F+EK F G +P+ RLG+L+C D W Sbjct: 99 NTAVVLEKDGSIAGTYRKMHIPDDPGFYEKFYFTPGDLGFEPVQTSVGRLGVLVCWDQWY 158 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + GA+ L A + K ++R +T Q SH LP+I VN+ Sbjct: 159 -PEAARLMALAGADLLLYPTAIGWAPTDTDAEKQRQRDAWITIQRSHAIANGLPVISVNR 217 Query: 208 VGGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WN 255 G + + + F G+SF Q + Q E+ + + D Q S+ W Sbjct: 218 TGREADPANPSSGIDFWGSSFACGPQGEFLAQASTDREETLLVD--IDLQRSEDVRRIWP 275 Query: 256 YMSD 259 ++ D Sbjct: 276 FLRD 279 >gi|262381674|ref|ZP_06074812.1| beta-ureidopropionase [Bacteroides sp. 2_1_33B] gi|262296851|gb|EEY84781.1| beta-ureidopropionase [Bacteroides sp. 2_1_33B] Length = 291 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 21/232 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKS 75 D A NI K EA R+G +L++ EL Y ED + +T + Sbjct: 13 DRAANIEKLNVNIREAAREGAELVVLQELHNGLYFCQTEDTNMFDLAETIPGPSTETFGA 72 Query: 76 DTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG- 132 + G +V+ + G+ N+ V+L+ IA + K+++P+ ++EK F G Sbjct: 73 LAKELGIVLVLSLFEKRAPGLYHNTAVVLEKDGTIAGKYRKMHIPDDPAYYEKFYFTPGD 132 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASPYYHNKLKKR 187 +PI RLG+L+C D W + + +GAE L +S K ++ Sbjct: 133 LGFEPIDTSVGRLGVLVCWDQWY-PEAARLMAMRGAEMLIYPTAIGWESSDTQEEKDRQL 191 Query: 188 HEIVTGQISHV---HLPIIYVNQVG------GQDELI-FDGASFCFDGQQQL 229 VT Q H LP+I VN+ G GQ I F G SF Q +L Sbjct: 192 GAWVTIQRGHAVANGLPVISVNRTGHEPDPSGQTGGIRFWGNSFVAGPQGEL 243 >gi|291566658|dbj|BAI88930.1| possible nitrilase [Arthrospira platensis NIES-39] Length = 269 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 15/177 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDT 77 D+ N+A++R E A RQG +LI E F ED + + S I + LK+ Sbjct: 16 DLQKNLAESRDLIELAIRQGAELIGLPENFSFMGEEEDKLIQGSEIAEATEKF--LKTTA 73 Query: 78 HDGGAGIV-VGFPRQDQEG-VLNSVVILDA-GNIIAVRDK-----INLPNYSEFHEKRTF 129 ++ GFP EG V N+ +++D G +A +K +N+P+ + + E T Sbjct: 74 QRFQVTLLGGGFPVPKGEGKVCNTALLVDPNGQELARYEKVHLFDVNVPDGNTYCESATV 133 Query: 130 ISGYSNDPIVFRDIRLGIL---ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 +G ++ P V+ LG L +C D+ + + +HL K+GAE LF A Y K Sbjct: 134 KAG-TDFPPVYNSPELGQLGLSVCYDV-RFPELYRHLSKRGAEVLFVPAAFTAYTGK 188 >gi|317031600|ref|XP_001393877.2| glutamine-dependent NAD(+) synthetase [Aspergillus niger CBS 513.88] Length = 717 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 131/600 (21%), Positives = 211/600 (35%), Gaps = 149/600 (24%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSFI 63 + +A LN D GN + + +A G L + EL I+GY D + +++ Sbjct: 5 VTLATCSLNQWALDFEGNCERIIESIRKAKAAGATLRVGPELEITGYGCLDAFLEGDTYL 64 Query: 64 QACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + H IV VG P + ++ N VI II +R K+ L N Sbjct: 65 HSWEMFARIID---HPDCQDIVVDVGMPVRHRDCKWNCRVIFYNRKIILIRPKMWLANDG 121 Query: 122 EFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKN 156 + E R F I+G P I RD LG+ CE+++ Sbjct: 122 NYREMRHFTPWQRPREVEDYYLEQIVGKITGQYKVPFGDALISTRDTCLGLETCEELFTP 181 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 + G E + + S + KL R ++T +Y NQ G D L Sbjct: 182 NGPHIPYGLAGVEIFSNSSGSHHELRKLDTRVNLITQATKLSGGIYLYANQQGCDGDRLY 241 Query: 216 FDGASFCF-------DGQQ----------------------QLAFQMKHFSEQNFMTEWH 246 +DG + G Q A + S Q+ Sbjct: 242 YDGCAMIVVNGNIVAQGSQFSLNDVEVVTATVDIEEVRTYRSSASRGMQASMQSPYVRLD 301 Query: 247 YDQQLSQWN------YMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 D +LS+ + Y ++ Y +EE A AC L DY++++ I LS Sbjct: 302 LDTRLSRRDEDADPGYAPSETLKPRYHVPEEEIALGPACWLW--DYLRRSGAAGYFIPLS 359 Query: 301 GGIDSALCA-AIAVDALGKENVQTI----------------------MLP---------- 327 GGIDS CA +I V ++ +E V+ + LP Sbjct: 360 GGIDS--CATSIIVHSMCREVVKAVQEGNEQVIKDVRRLCAEPADSTWLPTTSQEVCNRI 417 Query: 328 -------YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-----S 375 + +S ++ + A A +G + ++ ++ + +P Sbjct: 418 FHTSYMGTQNSSKETRDRAKLLAAEIGAYHTDFNFDTVITAMMNVFTIVTNFQPKFKVHG 477 Query: 376 GIVAE-----NIQSRIRGNILMALSNHSKAMLLT--------------TSNKSEISVGYG 416 G AE NIQ+R+R M LS ++L T +SN E GY Sbjct: 478 GSRAENQALQNIQARLR----MVLSYLFASLLPTVRQRPGGGGLLVLGSSNVDECLRGYL 533 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T Y S NP+ + K + + +W R+S + P+ + L +P+AEL P Sbjct: 534 TKYDASSADLNPIGSISKVDLKKFIAWARDSFDL-----PILD----DFLTATPTAELEP 584 >gi|262277057|ref|ZP_06054850.1| NAD+ synthetase [alpha proteobacterium HIMB114] gi|262224160|gb|EEY74619.1| NAD+ synthetase [alpha proteobacterium HIMB114] Length = 244 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 15/154 (9%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA--CA----KALGC 348 +++G+SGGIDSA+ + I+ ++TI+L +S +D + C K Sbjct: 28 LVVGVSGGIDSAVVSTIS----SMTGIKTIVLSMPIRQIKSQDDLSKLHCNWLENKFKNT 83 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 Y + + D+ +F + + E N ++R+R L ++ + +++ T NK Sbjct: 84 TYLNINLDDVFTNFENALGSNDNEHAFA----NSRARLRMTTLYQVAGSNNGIVVGTGNK 139 Query: 409 SE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 E VG+ T YGD +P+ D KTQV+ + Sbjct: 140 VEDFGVGFYTKYGDGGVDISPIADCTKTQVWDMG 173 >gi|256828519|ref|YP_003157247.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Desulfomicrobium baculatum DSM 4028] gi|256577695|gb|ACU88831.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Desulfomicrobium baculatum DSM 4028] Length = 270 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 10/220 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 +KIA QL+ + GD++GN+ K A + + L+LF E+ GY P L + + Sbjct: 1 MKIAAVQLSGLPGDVSGNLDKISAAVQTGAKASCRLLLFPEISDLGYDMPSIALAGRDWW 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYS 121 + D L + + +V G +G+ N++V G+I+A KI+L + Sbjct: 61 PR----VRDRLMALAREHDICLVCGVCLPGPDGLANALVAFGPTGDILARYRKIHLFTAT 116 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 + E F G F +R G+ +C D+ + + + G + + L AS + Sbjct: 117 DADETEVFSPGSEIVCFDFEGVRFGLSVCYDL-RFPELYRVQALHGCQAM--LLASAWPK 173 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 ++ + + ++ N++G Q F G S Sbjct: 174 RRIDIWQTLCAARALENQCFLLGANRIGDQGAFPFGGRSL 213 >gi|116511942|ref|YP_809158.1| NAD synthetase [Lactococcus lactis subsp. cremoris SK11] gi|123025421|sp|Q02Z86|NADE_LACLS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|116107596|gb|ABJ72736.1| NH(3)-dependent NAD(+) synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 274 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 34/251 (13%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + V L+DY++K F K ++G+SGG DS+L +A A+ + +T Sbjct: 15 PIIDPKEEIRVSVDFLKDYLKKYPFIKSFVLGISGGQDSSLAGRLAQIAIEEMRQETADA 74 Query: 327 PYKYTS------PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 YK+ + Q+ E+ A A A K DV VN ++ Q +G+ Sbjct: 75 SYKFVAVRLPFGVQADEEDAQRALAF-IKPDV---SLAVNIKAAVEGQVAALNEAGVEVS 130 Query: 381 -----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 NI++R R A++ + +L T + +E G+ T +GD PL L K Sbjct: 131 DFNKGNIKARQRMITQYAVAGQYQGAVLGTDHAAENITGFFTKFGDGGADLLPLFRLNK- 189 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDD 491 R + + LG P+I EK P+A+L +P D+ +L Y +DD Sbjct: 190 --------RQGKALLAELGA-----DPAIYEKVPTADLEEGKPGLADEIALGVTYNDIDD 236 Query: 492 IIKRIVENEES 502 + V +E++ Sbjct: 237 YTEGKVISEDA 247 >gi|289451116|gb|ADC94031.1| probable carbon-nitrogen hydrolase [Leptospira interrogans serovar Grippotyphosa] Length = 261 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 15/155 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ LN D A N+ + EA R G+DL++F E+ ++G+ V + Sbjct: 1 MKIALVSLNIKWEDKAYNLEHCKNLICEAVRYGVDLVIFPEMTLTGFSMNTEVIAED--P 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S +ID + + +V G + + LN++V + +D I Y++ H Sbjct: 59 NNSPSIDAFQKLAKENCVALVFGLVLKKENKALNTLVFIS-------KDGIEKTRYNKIH 111 Query: 125 ------EKRTFISGYSNDPIVFRDIRLGILICEDI 153 E R F G + + ++ G IC D+ Sbjct: 112 PFSFATEDRYFEGGRNLSKLTLSNLTFGFTICYDL 146 >gi|113970581|ref|YP_734374.1| NAD synthetase [Shewanella sp. MR-4] gi|114047812|ref|YP_738362.1| NAD synthetase [Shewanella sp. MR-7] gi|113885265|gb|ABI39317.1| NH(3)-dependent NAD(+) synthetase [Shewanella sp. MR-4] gi|113889254|gb|ABI43305.1| NH(3)-dependent NAD(+) synthetase [Shewanella sp. MR-7] Length = 296 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 43/230 (18%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQ------TIMLPYK 329 V ++ +Q +++G+SGG+DS+ LC +AVD+L E+ + LPY+ Sbjct: 45 VAFIKSKLQAARSKALVLGISGGVDSSTAGRLCQ-LAVDSLNSEHPDGGYQFIAVRLPYQ 103 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF-SLMSQFLQ---EEPSG----IVAEN 381 + E AC K + +H V+ + ++ F++ P + N Sbjct: 104 IQKDEH-EAQQACQFIQPTKLVTINVHQGVDGVHQATLTAFVEAGLHSPDAAKVDFIKGN 162 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++R+R L+ +++ T + +E G+ T +GD + PL L K QV Q+A Sbjct: 163 VKARMRMIAQYELAGLVGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRQVA 222 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 ++ + P +++ K+P+A+L +Q P+L+D Sbjct: 223 AYLGA--------------PETLVYKAPTADLEDNQ---------PLLED 249 >gi|312876086|ref|ZP_07736074.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor lactoaceticus 6A] gi|311797072|gb|EFR13413.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor lactoaceticus 6A] Length = 254 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 17/244 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L +KI I Q+ + + N+ + AN + +D+I F E+ ++GY E L+ + Sbjct: 14 LMYVKIGIVQMK-ISSVLTKNLNRIIHFLSLANAEDVDIICFPEMALTGYNIE-LLQSQE 71 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKINLPNY 120 + + + + + G ++G P +++ + N + VIL G I+ DK Y Sbjct: 72 LNERVNQLLGQIIDKCREYGIVCIIGHPYKEENKLFNRASVILPTGKILHY-DK----QY 126 Query: 121 SEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 EKR F SG ND +VF R G++IC D I K K + +F L A Sbjct: 127 PTEIEKRIFSSG--NDILVFEHDQKRFGVVICRD-QNYYEIFKKYKDNDCDGVFILAAHF 183 Query: 179 YYHN----KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 Y K+ K I + + N VG ++I G S DG + + Sbjct: 184 YNPKEARWKIDKNRAIPIARAVENQYYVFLANAVGPHLKMISLGHSLIVDGDGCVVCEAD 243 Query: 235 HFSE 238 SE Sbjct: 244 EASE 247 >gi|86132593|ref|ZP_01051186.1| NAD+ synthase [Dokdonia donghaensis MED134] gi|85816835|gb|EAQ38020.1| NAD+ synthase [Dokdonia donghaensis MED134] Length = 262 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 13/168 (7%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L++Y + ++G+SGGIDSAL + + A V + +P + + + A Sbjct: 14 LKEYATNARMNGFVVGISGGIDSALTSTLC--AKTGLRVLCVEMPI-HQDERQVTRAKEH 70 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-------NIQSRIRGNILMALS 395 K L ++ + D+ + Q + P ++E N ++R+R + L + Sbjct: 71 IKQLKERF--ANVTDVEVNLTDTFEQMKKAVPVAEMSEQLNLSLANTRARLRMSTLYYFA 128 Query: 396 NHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 K ++ T NK E VG+ T YGD +P+ DL K++V+ A+ Sbjct: 129 GLHKYLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVYACAA 176 >gi|260943464|ref|XP_002616030.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238849679|gb|EEQ39143.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 715 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 119/588 (20%), Positives = 206/588 (35%), Gaps = 128/588 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA LN D GN + + ++A +G L + EL + GY D + Sbjct: 5 VTIATCNLNQWALDFEGNRDRILESIKQAKARGAKLRVGPELEVCGYGCLDHFAENDLYD 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + S + +G P + N ++ I+ +R K+ L N + Sbjct: 65 QSWQMYSQILSSPETDNIILDIGMPIIHKSIKYNCRILSYNHKILYIRPKLYLANDGNYR 124 Query: 125 EKRTF--------------------ISGYSNDPI---VFR--DIRLGILICEDIWKNSNI 159 E R F ++G ++ PI V + +LG CE+++ + Sbjct: 125 EMRYFTPWNRPKYHEVYQLPKKIQRVTGQTSVPIGDCVMETLETKLGAETCEELFTPESP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + + S + KL R E++T +Y NQ G D L +DG Sbjct: 185 HISMALDGVEIITNSSGSHHELRKLDTRLELITEATKKCGGIYLYANQKGCDGDRLYYDG 244 Query: 219 ASFCFDGQQQLAFQMKHFSEQNF-------------------MTEWHYDQQLSQWNYMSD 259 + C ++ Q FS + Q S ++ +S Sbjct: 245 CA-CIVVNGKMLAQGSQFSLSDVEVVVATVDLDDVRSYRNQKSAAMQSVNQSSPYHTIST 303 Query: 260 D----SASTMYIP--------------LQEEEADYN-ACVLSLRDYVQKNNFHKVIIGLS 300 + +S ++ P L EEE AC L DY++++ + LS Sbjct: 304 NIEMSPSSHIFNPSIMPTEPLEKIRYHLPEEEIALGPACW--LWDYLRRSKTAGFFLPLS 361 Query: 301 GGIDSALCAAI-------AVDALGKENVQTIMLPYKYT--------SPQSLED------- 338 GGIDS A I V A+ EN Q + T +PQ L + Sbjct: 362 GGIDSCATAVIVHSMCRLVVAAVKDENKQVLEDVRSLTKDPSFTPKTPQELANRIFYSSF 421 Query: 339 -------------AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------S 375 A A+ +G + + + LV ++ ++P Sbjct: 422 MGTVNSSKETRARAKELAQEIGSYHIDMNMDTLVTAVVNVFEVATGKKPIFKIFGGSQTE 481 Query: 376 GIVAENIQSRIRGNI------LMALSNHSKA--MLLTTSNKSEISVGYGTLYGDMSGGFN 427 + +NIQ+R+R + L+ + + ++L ++N E GY T Y S N Sbjct: 482 NLALQNIQARLRMVLSYLFAQLLPWTRKKEGGLLVLGSANVDECLRGYLTKYDCSSADIN 541 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 P+ + KT + W ++ I L+ +P+AEL P Sbjct: 542 PIGGISKTDLKAFIKWAETN--------FEMPILREFLDATPTAELEP 581 >gi|46124205|ref|XP_386656.1| hypothetical protein FG06480.1 [Gibberella zeae PH-1] Length = 320 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE------ 54 M K LK+A Q PV D+ G + K+ R ++A G ++I F E+FI GYP Sbjct: 1 MSKTLKVAAIQAEPVWQDLQGGVEKSIRLIQDAASNGANVIGFPEVFIPGYPWSIWANSP 60 Query: 55 -------DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AG 106 + FK S ++ S +D +++ + G +V+G+ + + + + +D G Sbjct: 61 VENAAWINEYFKNS-LERESPEMDQIRAAVREAGVFVVLGYSERYRGTLYIAQSFIDETG 119 Query: 107 NIIAVRDKI 115 I+ R KI Sbjct: 120 TIVLHRRKI 128 >gi|261251838|ref|ZP_05944412.1| N-carbamoylputrescine amidase [Vibrio orientalis CIP 102891] gi|260938711|gb|EEX94699.1| N-carbamoylputrescine amidase [Vibrio orientalis CIP 102891] Length = 288 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 16/238 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M K + A QL D+ N+ KA++A EA G ++IL ELF + Y E Sbjct: 1 MSKVVTFAALQLTKSW-DLEDNLNKAKQAIREAAENGANVILPQELFAAPYFCKKQEAKY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + I + + + G I V + + NS+V++DA G ++ K + Sbjct: 60 FELAEETENCRLIKEMSALAKELGVVIPVSYFEKAGNTFFNSLVMIDADGTVLDNYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + + G IC D W + + L GAE +F Sbjct: 120 IPDGPGYSEKYYFSPGDTGFKVWQTQFGKFGAGICWDQW-FPELARSLALHGAEAIFYPT 178 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFD 224 ++ + P + H + G + +P+I N+VG + E F G+SF D Sbjct: 179 AIGSEPQDPTLDSRDHWQRTMQGHSAANLVPVIASNRVGTEVDDGIETTFYGSSFITD 236 >gi|302887960|ref|XP_003042867.1| hypothetical protein NECHADRAFT_92236 [Nectria haematococca mpVI 77-13-4] gi|256723781|gb|EEU37154.1| hypothetical protein NECHADRAFT_92236 [Nectria haematococca mpVI 77-13-4] Length = 322 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 13/128 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP----PEDL 56 M +K+A Q P D+ G++AK R +EA G ++ F E+FI GYP Sbjct: 1 MSSPIKVAAIQAEPCWNDLKGSVAKTTRLIQEAASNGAKVVGFPEIFIPGYPWTIWANSP 60 Query: 57 VFKKSF--------IQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGN 107 V F ++ S ++ +K+ + G +V+G+ R + ++ I + G Sbjct: 61 VSNAGFMNEYFHNSLEKDSEEMEEIKTAVREAGVFVVLGYSERYNGSLYISQSFIDETGT 120 Query: 108 IIAVRDKI 115 I+ R KI Sbjct: 121 IVGHRRKI 128 >gi|182414672|ref|YP_001819738.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Opitutus terrae PB90-1] gi|177841886|gb|ACB76138.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Opitutus terrae PB90-1] Length = 292 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 45/235 (19%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPED---LVFKKSFIQACSSAIDT 72 D A N+ K EEA R+G ++I ELF S Y ED + ++A Sbjct: 16 DPAANLKKCLALAEEAARRGANIICTPELFRSQYFCQSEDHANFQLAEPIPGPSTAAFQE 75 Query: 73 LKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFI 130 L + H G IV + G+ N+ I+DA G ++ V K+++P+ ++EK F Sbjct: 76 L-AKKH--GVVIVASLFEKRAAGLYHNTAAIIDADGALLGVYRKMHIPDDPLYYEKFYFT 132 Query: 131 SGYSNDPIVFRDI-----RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK-- 183 G + FR R+G+LIC D W + QGAE LF A ++ + Sbjct: 133 PGDTG----FRAWDTKFGRVGVLICWDQW-YPEAARLTAMQGAEILFYPTAIGWHPKEKA 187 Query: 184 ------------LKKRHEIVTGQISHVHLPIIYVNQVG-----GQDELIFDGASF 221 +++ H + G + VN++G G D + F G SF Sbjct: 188 DYGADQHGAWETIQRGHAVANGCF------VAAVNRIGLERPVGGDGIEFWGQSF 236 >gi|289177719|gb|ADC84965.1| Glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis BB-12] Length = 191 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 20/171 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A A N V D N A A G ++ E+ ++ Y +D++ + Sbjct: 21 VPVATASPNTRVADPMANAELCCDAIVRAANAGAKVVALPEVVLTSYIADDMLCHDIVLG 80 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + L ++T VG P + N++ I AG I+ V K +P Y Sbjct: 81 AAEETLAHLVAETAKLDVVFSVGLPLCVNGKIYNTLAICHAGEIMGVVPKTYIPTYGVDF 140 Query: 125 EKRTF-----------ISGYSNDPI----VFR-----DIRLGILICEDIWK 155 E R F ++G + P VFR + LG ICEDIW Sbjct: 141 EGRWFSSGPADVTYITVAGQEHVPFGSHQVFRCCQMPQLCLGYEICEDIWA 191 >gi|284042459|ref|YP_003392799.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Conexibacter woesei DSM 14684] gi|283946680|gb|ADB49424.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Conexibacter woesei DSM 14684] Length = 266 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 15/232 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ +AQL P GD+ + A A A +L +F ELF++GY P + + Sbjct: 1 MRALLAQLEPAAGDV--DANAATVAAALAEHPDAELAVFPELFLTGYDPSRA--AQLALT 56 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEF 123 + + T+ + G +++GF + + GV N+V +D+ G K ++ + Sbjct: 57 PADAPLPTVCAVAKRHGTALLLGFAERTKHGVANAVACIDSDGRWAGTYRKTHMFGAT-- 114 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL--NASPYYH 181 E+ F+ G + + + + LIC D+ + + + + GA + ++ N PY Sbjct: 115 -ERAAFVPGDALCVVELAGVSVAPLICFDM-EFPEPARAVSRAGAALIVTIAANMEPYGP 172 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + P +YVN+VG + L F G S L ++ Sbjct: 173 DHALAARARALDN----RRPHLYVNRVGEEAGLQFVGGSAAVASDGSLVAEL 220 >gi|226305831|ref|YP_002765791.1| NH(3)-dependent NAD(+) synthetase [Rhodococcus erythropolis PR4] gi|259511197|sp|C0ZXG7|NADE_RHOE4 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|226184948|dbj|BAH33052.1| NH(3)-dependent NAD(+) synthetase [Rhodococcus erythropolis PR4] Length = 274 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 109/280 (38%), Gaps = 51/280 (18%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQ-- 322 P + A+ A V L+DYV+ ++G+SGG DS L A+ AV L +E + Sbjct: 16 PTIDAAAEVRARVQFLKDYVRSTPAKGFVLGISGGQDSTLAGALAQRAVTELREEGHEAE 75 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEE 373 + LPY + D + ALG +V P D S E Sbjct: 76 FVAVRLPYGAQA-----DESDAQIALGFIKPDRSITVNVKPGADATAREAS--EALGNGE 128 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 V NI++R R I A++ +++ T + +E G+ T +GD PL L Sbjct: 129 LRDFVRGNIKARERMVIQYAIAGQLGYLVIGTDHAAEAITGFFTKFGDGGVDITPLTGLS 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K R + LG P S K P+A+L RP D+ +L Y + Sbjct: 189 K---------RQGAALLQELG-----APESTWRKVPTADLEDDRPALPDEVALGVTYSQI 234 Query: 490 DDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 DD ++ ++ + E +E + + +KR Sbjct: 235 DDYLE------------GKDVSSEVAEKLEKMFANTRHKR 262 >gi|268680205|ref|YP_003304636.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Sulfurospirillum deleyianum DSM 6946] gi|268618236|gb|ACZ12601.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Sulfurospirillum deleyianum DSM 6946] Length = 290 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 33/265 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A+ Q + + G IAK + A+ QG +L++ EL +D F + Sbjct: 1 MKTALIQ-HAIQGSAKETIAKTVSLIQHASSQGAELVVLQELH------QDRYFCINEDV 53 Query: 65 ACSSAIDTLKSD-------THDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKI 115 AC +SD + +V + G+ N+ VI + +A + K+ Sbjct: 54 ACFDLASNWESDIAFWSGIAKENNVVLVTSLFEKRSAGLYHNTAVIFEKDGTVAGKYRKM 113 Query: 116 NLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 ++P+ F+EK F G +PI +LG+L+C D W + + +GAE L Sbjct: 114 HIPDDPGFYEKFYFTPGDMGYNPIQTSVGKLGVLVCWDQWY-PEAARLMALKGAEMLIYP 172 Query: 175 NASPYYHNKL---KKRHEIVTGQISHVH-----LPIIYVNQVGGQ-------DELIFDGA 219 A ++ + K+R + H LP+I VN++G + D + F G Sbjct: 173 TAIGWFDEDMEDEKRRQCDAWETVQRGHAIANGLPVISVNRIGKEEDNHGVLDGIRFWGN 232 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTE 244 SF Q ++ + H E+ + + Sbjct: 233 SFVAGPQGEIIVRASHDKEEVLIVD 257 >gi|196230938|ref|ZP_03129798.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chthoniobacter flavus Ellin428] gi|196224768|gb|EDY19278.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chthoniobacter flavus Ellin428] Length = 294 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 112/277 (40%), Gaps = 23/277 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKS 61 K+ +A+ Q+ + N+AKA EA +G +I ELF S Y ED + + Sbjct: 5 KVTLALVQMR-CSAEPQENLAKALARVSEAADRGAQIICLQELFTSQYFCQIEDHKYFQL 63 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPN 119 + + D L + G IV + G+ N+ I+DA G + K+++P+ Sbjct: 64 AEEIPGPSTDALCRLAKERGVVIVASLFEKRSAGLYHNTAAIIDADGTYLGKYRKMHIPD 123 Query: 120 YSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 ++EK F G R R+G+ +C D W + + GA+ LF A Sbjct: 124 DPLYYEKFYFTPGDLGFRAWKTRYARIGVCVCWDQWYPES-ARLTALAGAQILFFPTAIG 182 Query: 179 YYHNK-----LKKRHEIVTGQISHVHLPIIYV---NQVG-----GQDELIFDGASFCFDG 225 ++ + +++ T Q SH YV N+VG G + F G SF D Sbjct: 183 WHPGEKEQYGMRQHSSWETIQRSHAIANGCYVAVPNRVGHEAPDGGPGIEFWGQSFVADP 242 Query: 226 QQQLAFQMKHFSEQNFMTEWH---YDQQLSQWNYMSD 259 Q+ + E+ + E D Q + W + D Sbjct: 243 SGQIVAKASVSDEEILLVEADLDALDTQRTHWPFFRD 279 >gi|323528496|ref|YP_004230648.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. CCGE1001] gi|323385498|gb|ADX57588.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. CCGE1001] Length = 285 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 2/102 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF--KKSF 62 L IA AQ PV GD+ N+AK A +G L++F E F+SGY P + + Sbjct: 13 LPIAAAQAQPVCGDVTANLAKTVELTGVAADRGARLVVFPEKFLSGYEPGLIAGDPARYA 72 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD 104 +A + +D ++ G +VVG + G+ S ++ D Sbjct: 73 FEASDARLDPIREVCRRRGISVVVGAATRAAHGLHISSLVFD 114 >gi|242241749|ref|ZP_04796194.1| NAD synthetase [Staphylococcus epidermidis W23144] gi|242234800|gb|EES37111.1| NAD synthetase [Staphylococcus epidermidis W23144] Length = 277 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 32/226 (14%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPYKYTS-P 333 ++ YV+ ++F +++G+SGG DS L A +AV+ L +E + LPY Sbjct: 33 IKAYVKSHSFIQTLVLGISGGQDSTLTGKLAQLAVNELKEEGRNCKFIAVKLPYGVQQDA 92 Query: 334 QSLEDAAACAKA-LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 +EDA + ++ P D S L + G N ++R R + Sbjct: 93 NEVEDALEFINPDITYTVNIKPAVDQSVQSLSEAGIKLTDFQKG----NEKARERMKVQF 148 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 +++++++ ++L T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 149 SIASNTQGIVLGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGKQLLAY--------- 199 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 200 LGA-----PKHLYEKVPTADLEDDKPQLPDEEALGVSYHDIDDYLE 240 >gi|299822538|ref|ZP_07054424.1| NAD(+) synthase [Listeria grayi DSM 20601] gi|299816067|gb|EFI83305.1| NAD(+) synthase [Listeria grayi DSM 20601] Length = 274 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 34/273 (12%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 IP E E + V L+ Y++ F K +++G+SGG DS L IA A+ + +T Sbjct: 14 IPEIEPEVEIRKSVDFLKSYLKTYPFMKSLVLGISGGQDSTLTGKIAQTAIAELREETGD 73 Query: 326 LPYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE- 380 L Y++ + P + D C A+ I + + LQ+ +GIV Sbjct: 74 LSYQFIAVRLPNGTQIDEEDCQDAIEFIGPDQVITVNIKAAVDASEKALQD--AGIVLSD 131 Query: 381 ----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 N ++R R + +++ + ++ T + +E G+ T YGD NP+ L K Q Sbjct: 132 FAKGNEKARERMKVQYSIAAMNNGAVVGTDHAAEAITGFFTKYGDGGTDINPIFRLTKRQ 191 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 QL LG P + K P+A+L + D+ +LP D++ + Sbjct: 192 GKQL---------LKALG-----CPEHLYLKQPTADL---EDDRPALP-----DEVALGV 229 Query: 497 VENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 ++ ++ ETV +E+ +++KR Sbjct: 230 TYDDIDDYLEGKQLPKETVAVIENWYLKTQHKR 262 >gi|209546079|ref|YP_002277969.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538936|gb|ACI58869.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 281 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 12/174 (6%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + +A Q P+VGD A N+A R A +G ++++ EL SGY D + Sbjct: 9 RMATVATVQFEPIVGDRAHNLAAIERLARAAKAKGAEIVVLPELADSGYSFHDGDEVAAL 68 Query: 63 IQACSSAI--DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + +TL + IV G QD + NS ++ I K++L N Sbjct: 69 AGPVPGGLSAETLCRLARELCLYIVSGVAEQDGDRFYNSALLCGPDGYIGKYRKLHLWN- 127 Query: 121 SEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFL 171 +E R F G P+ D+ R+GI IC D W + L GAE + Sbjct: 128 ---NENRLFRKGDIGLPVF--DLPFGRIGIAICYDGWFPETF-RELALAGAELV 175 >gi|229493357|ref|ZP_04387146.1| NAD+ synthetase [Rhodococcus erythropolis SK121] gi|229319673|gb|EEN85505.1| NAD+ synthetase [Rhodococcus erythropolis SK121] Length = 274 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 109/280 (38%), Gaps = 51/280 (18%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQ-- 322 P + A+ A V L+DYV+ ++G+SGG DS L A+ AV L +E + Sbjct: 16 PTIDAAAEVRARVQFLKDYVRSTPAKGFVLGISGGQDSTLAGALAQRAVTELREEGHEAE 75 Query: 323 --TIMLPYKYTSPQSLEDAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEE 373 + LPY + D + ALG +V P D S E Sbjct: 76 FVAVRLPYGAQA-----DESDAQIALGFIKPDRSLTVNVKPGADATAREAS--EALGNGE 128 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 V NI++R R I A++ +++ T + +E G+ T +GD PL L Sbjct: 129 LRDFVRGNIKARERMVIQYAIAGQLGYLVIGTDHAAEAITGFFTKFGDGGVDITPLTGLS 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K R + LG P S K P+A+L RP D+ +L Y + Sbjct: 189 K---------RQGAALLQELG-----APESTWRKVPTADLEDDRPALPDEVALGVTYSQI 234 Query: 490 DDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 DD ++ ++ + E +E + + +KR Sbjct: 235 DDYLE------------GKDVSSEVAEKLEKMFTNTRHKR 262 >gi|329940377|ref|ZP_08289658.1| putative hydrolase [Streptomyces griseoaurantiacus M045] gi|329300438|gb|EGG44335.1| putative hydrolase [Streptomyces griseoaurantiacus M045] Length = 280 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 21/256 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y P Sbjct: 1 MAHVVRAALVQAT-WTGDTESMIAKHEEHAREAARQGARVIGFQEVFNAPYFCQVQDPAH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRD 113 + + + + + +++ + G +VV +Q G N+ ++DA G + Sbjct: 60 YRWAEPVPEGPT--VTRMRALARETGMVLVVPVFEVEQSGFYYNTAAVIDADGTYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G + P+ + R+G+ IC D + L QGA+ ++ Sbjct: 118 KHHIPQVEGFWEKYYFRPGNAGWPVFDTAVGRVGVYICYDR-HFPEGWRQLGLQGAQLVY 176 Query: 173 SLNASPYYHNKLKK---RHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQ 227 + +A+ H L R E +++ + + +N+VG ++ + F G S+ D + Sbjct: 177 NPSAT---HRGLSAHLWRLEQPAAAVANEYF-VAAINRVGREEYGDNDFYGTSYFVDPRG 232 Query: 228 QLAFQMKHFSEQNFMT 243 QL + +E+ + Sbjct: 233 QLVGEAAGDTEEQLLV 248 >gi|320353256|ref|YP_004194595.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfobulbus propionicus DSM 2032] gi|320121758|gb|ADW17304.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfobulbus propionicus DSM 2032] Length = 294 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 40/269 (14%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC--------SSAIDTL 73 NI + R EA QG L + EL + Y F ++ C + + Sbjct: 20 NIDTSIRGLREAAAQGAHLAVLQELHGTPY------FCQTEDTGCFDLAEPIPGPSTELF 73 Query: 74 KSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFIS 131 + + G IV + G+ N+ V+L+A G+I K+++P+ ++EK F Sbjct: 74 GAVAKELGLVIVTSLFERRAPGLYHNTAVVLEADGSIAGCYRKMHIPDDPGYYEKFYFTP 133 Query: 132 G-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN-----KLK 185 G PI RLG+LIC D W + + GAE L A Y N + + Sbjct: 134 GDLGFTPIPTSVGRLGVLICWDQWY-PEAARLMAMAGAELLVYPTAIGYDPNDTQDEQSR 192 Query: 186 KRHEIVTGQISHV---HLPIIYVNQVGGQDELIFDGASFCFDG-------QQQLAFQMKH 235 +R +T Q H +P++ VN+VG + + GA F G Q +L Sbjct: 193 QREAWMTIQRGHAIANGIPVLSVNRVGFEPDPSGVGAGAHFWGNSLAAGCQGELLAVADT 252 Query: 236 FSEQNFMTEWHYDQQLSQ-----WNYMSD 259 EQ + + D+Q S+ W Y+ D Sbjct: 253 EREQVLVVD--LDRQRSEKIRRIWPYLRD 279 >gi|77465667|ref|YP_355170.1| amidohydrolase [Rhodobacter sphaeroides 2.4.1] gi|77390085|gb|ABA81269.1| Predicted amidohydrolase [Rhodobacter sphaeroides 2.4.1] Length = 280 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 31/230 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA AQL+PV GD +A A A G LI+F E F++G +D + + +Q Sbjct: 1 MKIAFAQLSPVHGDTPATVALVAEAARAAAADGARLIVFPECFLTGGSFDD---RAALLQ 57 Query: 65 ACSSAIDTLKSD-------THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A A+D + D + +VVGF ++ LN+ ++ II + K++L Sbjct: 58 A---AVDIERGDLAPILLAAREADIHVVVGFYQKSGPQALNTAALIGPEGIIGLHHKMHL 114 Query: 118 P-----NYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEF 170 P +++ + I G P VF R+G+ IC +I + + + L +GAE Sbjct: 115 PFMIGDRFADIPQ----IEG----PSVFDTAIGRIGLAICYEI-RFPEVIRTLALEGAEL 165 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + A P L V + V+ + N++ D + F G+S Sbjct: 166 VVLPAAWPEAARILPDLFSRVRAAENFVYF--LSSNRIDVDDGMAFMGSS 213 >gi|311741191|ref|ZP_07715015.1| NAD+ synthetase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303361|gb|EFQ79440.1| NAD+ synthetase [Corynebacterium pseudogenitalium ATCC 33035] Length = 273 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 29/238 (12%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTI 324 P + EA+ V L DY++ ++G+SGG DS L A +AV+ + + Sbjct: 23 PFIDPEAEVQRRVDFLVDYLRTTGAKGYVLGISGGQDSTLAGKLAQLAVERVDGAEFWAV 82 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE---- 380 LP+ Q+ ED A A + D D+ +L Q V + Sbjct: 83 RLPHGV---QADEDDAQIALDF-IQPDHRATVDIKPATLALDEQVADALQLADVTDFNRG 138 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N ++R+R A++ A+++ T + +E + T +GD + PL L K Sbjct: 139 NTKARLRMTAQYAIAGEVGALVIGTDHAAENVTAFFTKWGDGAADLLPLAGLNK------ 192 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG P S EK P+A+L +P D+E+L Y +DD ++ Sbjct: 193 ---RQGAALLEHLG-----APRSTWEKVPTADLEDDKPQLPDEEALGVTYAHIDDYLE 242 >gi|91778138|ref|YP_553346.1| NAD synthetase [Burkholderia xenovorans LB400] gi|91690798|gb|ABE33996.1| NH(3)-dependent NAD(+) synthetase [Burkholderia xenovorans LB400] Length = 286 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 38/234 (16%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTS 332 V L Y++ + ++G+SGG+DS A +AV+ L E+ + I LPY Sbjct: 33 VTFLVSYLRGSGLKTYVLGISGGVDSTTAGRLAQLAVEQLRAEHYEAQFVAIRLPYG--- 89 Query: 333 PQSLEDAAACAKAL-------GCKYDVLPIHDLVNHFFSLMSQFLQEEP-SGIVAENIQS 384 +D A +AL D+ P D + +E V NI++ Sbjct: 90 --EQKDEADAQQALRFIRADQNLAIDIKPAADAMLAALDRSGVLFNDESHQDFVHGNIKA 147 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R R A++ +++ T + +E +G+ T +GD PL L K +V Sbjct: 148 RQRMIAQYAVAGARAGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLNKRRV------- 200 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAE---LRPHQTDQESLP-PYPILDDIIK 494 + LG P + K P+A+ LRP + D+++ PY +DD ++ Sbjct: 201 --RAVAKALG-----APEELAHKVPTADLEMLRPQRPDEDAYGIPYDAIDDFLE 247 >gi|223984413|ref|ZP_03634551.1| hypothetical protein HOLDEFILI_01845 [Holdemania filiformis DSM 12042] gi|223963608|gb|EEF67982.1| hypothetical protein HOLDEFILI_01845 [Holdemania filiformis DSM 12042] Length = 287 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 20/191 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---------- 51 + K KIA+ Q D+ N A A R EA + D ILF E F++ Y Sbjct: 1 MNKFKIALVQHKTKSTDVQENTALALRYIAEAKQANADFILFPECFLTSYTFPEICETFQ 60 Query: 52 PPEDLVFKKSFIQACSSA-------IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD 104 P + L F C +A ++T++ G+ + Q ++ NS ++D Sbjct: 61 PVKSLESDPDFHAWCENALHDECDTLNTIRQAAKRHAIGVEITAFTQGKKYPQNSAYLID 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 AV K + + +F +R SG F D+ LG +IC D + + L Sbjct: 121 RNG--AVLMKYSKVHTCDFSFERYLESGEEFKVCHFEDLCLGTMICYDREYPEST-RELM 177 Query: 165 KQGAEFLFSLN 175 QGAE + N Sbjct: 178 LQGAELILIPN 188 >gi|254387366|ref|ZP_05002616.1| NH(3)-dependent NAD(+)synthetase [Streptomyces sp. Mg1] gi|194346161|gb|EDX27127.1| NH(3)-dependent NAD(+)synthetase [Streptomyces sp. Mg1] Length = 276 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 111/272 (40%), Gaps = 53/272 (19%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVD---ALGKENVQTIM-LPYKYTSPQ 334 L + + +++G+SGG+DS LC +AV+ A G E V M LPY + Sbjct: 36 LAERLTSTGLRSLVLGISGGVDSTTAGRLCQ-LAVERARAAGHEAVFYAMRLPYGVQA-- 92 Query: 335 SLEDAAACAKALG-------CKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAENIQSRI 386 D ALG DV P D + + + F V NI++R Sbjct: 93 ---DEHDAQLALGFIRADRVLTVDVKPASDAALESALAGGTVFRDAGHQDFVQGNIKARQ 149 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R A++ +++ T + +E G+ T +GD + PL L K R Sbjct: 150 RMVAQYAVAGAHDGLVVGTDHAAEAVSGFFTKFGDGAADLVPLTGLTK---------RRV 200 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIKRIVENEES 502 + LG P +++ K+P+A+L P + D+++L Y +DD ++ +E + Sbjct: 201 RAVADALGA-----PAALVWKTPTADLETLAPGKADEDALGVTYDDIDDFLEGKPVDERA 255 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 F + Y R EH +RQ P+ Sbjct: 256 FDTIVRRY-----RLTEH--------KRQLPI 274 >gi|218548691|ref|YP_002382482.1| NAD synthetase [Escherichia fergusonii ATCC 35469] gi|226724349|sp|B7LQ52|NADE_ESCF3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|218356232|emb|CAQ88849.1| NAD synthetase, NH3/glutamine-dependent [Escherichia fergusonii ATCC 35469] gi|324113488|gb|EGC07463.1| NAD synthase [Escherichia fergusonii B253] gi|325497102|gb|EGC94961.1| NAD synthetase [Escherichia fergusonii ECD227] Length = 275 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 50/266 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L + A++ L G E +Q + LPY + Sbjct: 30 LKSYLKTYPFLKSLVLGISGGQDSTLAGKLCQMAINELRAETGNETLQFIAVRLPYGIQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + LG P + +K+P+A+L RP D+ +L Y +DD ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADLEDDRPSLPDEAALGVSYDNIDDYLE---------- 239 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKRR 530 + ++ + +E+ +E+KRR Sbjct: 240 --GKTVPEQVAKTIENWYLKTEHKRR 263 >gi|218261585|ref|ZP_03476339.1| hypothetical protein PRABACTJOHN_02007 [Parabacteroides johnsonii DSM 18315] gi|218223940|gb|EEC96590.1| hypothetical protein PRABACTJOHN_02007 [Parabacteroides johnsonii DSM 18315] Length = 294 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 34/269 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + LK+ + Q GD A NI K ++ QG++L++ EL L F ++ Sbjct: 1 MNTLKVGMVQ-QANTGDRAANIEKLKQNIRVCALQGVELVVLQELH------NGLYFCQT 53 Query: 62 -----FIQA---CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAV 111 F QA + + + + G +V+ + G+ + +VVI G I Sbjct: 54 ENTEVFDQAEPIPGPSTEGFGALAKELGIVLVLSLFEKRAPGLYHNTAVVIEKDGTIAGK 113 Query: 112 RDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K+++P+ ++EK F G +PI +LG+L+C D W + + +GAE Sbjct: 114 YRKMHIPDDPAYYEKFYFTPGDLGFEPIDTSVGKLGVLVCWDQWY-PEAARLMAMKGAEL 172 Query: 171 L-----FSLNASPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQVG------GQDELI- 215 L +S K ++ VT Q H LP++ VN+VG GQ I Sbjct: 173 LIYPTAIGWESSDTEDEKKRQLGAWVTVQRGHAVANGLPVVTVNRVGHEADPSGQTNGIQ 232 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 F G SF Q +L ++ + E+ + E Sbjct: 233 FWGNSFVAGPQGELLAELSNSDEEIRIVE 261 >gi|332535350|ref|ZP_08411146.1| NAD synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332035223|gb|EGI71731.1| NAD synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 276 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALCA---AIAVDALGKENVQ------TIMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS+ C +AV+ L KE+ + LPY Q+ ED A A Sbjct: 40 LVLGISGGVDSSTCGRLCQLAVNELNKEHDTDKYQFIAVRLPYGV---QADEDEAQMAVD 96 Query: 344 ---KALGCKYDVLPIHDLVNHFFSLMS-----QFLQEEPS-GIVAENIQSRIRGNILMAL 394 + +V P D + H ++ + + L E+ + N+++R R + Sbjct: 97 FIQPSKRMTVNVQPAADAL-HEQAIAAVVGSGEALPEQAQIDFIKGNVKARQRMVAQYEI 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + +++ T + +E G+ T +GD + PL L K QV LA + LG Sbjct: 156 AGCCQGLVVGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVRALA---------TALG 206 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P +++K+P+A+L RP TD+E+L Y +DD ++ Sbjct: 207 A-----PALLVDKAPTADLESDRPGLTDEEALGLSYEQIDDFLE 245 >gi|330820080|ref|YP_004348942.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia gladioli BSR3] gi|327372075|gb|AEA63430.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia gladioli BSR3] Length = 278 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 17/221 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I +AQ+ V G +A N+A+ A R G DLI+F E ++G+P + V + + Sbjct: 1 MQIELAQIPVVDGHVAPNLARVTEVI-GARRDGTDLIVFPETTLTGFPTRENVRELAEPL 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +S I ++ G G+ VGF +D E N+ V++DA +A+R Y + H Sbjct: 60 AGAS-IAAVREAARAAGVGVAVGFAERDGERFFNTTVLVDAQGEVALR-------YRKTH 111 Query: 125 ----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F G F+ + +G+LIC DI + + + GA+ L N + Sbjct: 112 LWASDVGVFEPGDRYAVCEFKGLTVGLLICYDI-EFPETARAVASLGADLLIVTNGNMEP 170 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGAS 220 + +R + + + + VN++G G D+L F G S Sbjct: 171 FGPVHRRAIVARAMENQMFAAL--VNRIGSGDDDLSFPGES 209 >gi|237738100|ref|ZP_04568581.1| carbon-nitrogen hydrolase [Fusobacterium mortiferum ATCC 9817] gi|229419980|gb|EEO35027.1| carbon-nitrogen hydrolase [Fusobacterium mortiferum ATCC 9817] Length = 271 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 70 IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF 129 I+ LK+ T + ++VG +D + + NS +++D G +I KI+L ++ EK F Sbjct: 64 INKLKNITLENKKSVIVGVAEKDGDKIYNSAIVIDKGYLIGTYRKIHLTDF----EKNFF 119 Query: 130 ISGYSNDPIVFRDIRLGILICEDIW 154 +G N + + +G+ +C D+W Sbjct: 120 ETGKENKVFEVQGVSIGLQVCFDVW 144 >gi|71280832|ref|YP_270576.1| NAD synthetase [Colwellia psychrerythraea 34H] gi|71146572|gb|AAZ27045.1| NAD+ synthetase [Colwellia psychrerythraea 34H] Length = 281 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 46/261 (17%) Query: 262 ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 A +P + + + N V ++ + ++ +++G+SGG+DS+ C +A A+ + N Sbjct: 8 AEMKVLPEIDVQFEINRRVAFIKKQLVQSGLTNLVLGISGGVDSSTCGRLAQLAVNELNG 67 Query: 322 Q-------------TIMLPYKYTSPQSLEDAAACA----KALGC-KYDVLPIHDLVNH-F 362 Q + LPY Q+ ED A A + C +VL D ++H Sbjct: 68 QLDEGEDKTHYQFIAVRLPYGI---QADEDDAQQAVDFIQPSHCLTTNVLAGADGIHHEV 124 Query: 363 FSLMS--QFLQEEPSGI--VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 MS Q L + I N+++R R ++ A+++ T + +E G+ T Sbjct: 125 LQAMSKAQILTSSDAQIDFSKGNVKARARMVSQYHIAGIIGALVIGTDHSAENITGFFTK 184 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL-EKSPSA---ELR 474 +GD + PL L K QV +A E+ PSIL +K+P+A EL Sbjct: 185 WGDGACDLAPLFGLSKRQVRAIAK---------------ELGAPSILVDKAPTADLEELE 229 Query: 475 PHQTDQESLP-PYPILDDIIK 494 P +TD+++L Y LD+ ++ Sbjct: 230 PGKTDEDALGISYEQLDNFLE 250 >gi|209549699|ref|YP_002281616.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535455|gb|ACI55390.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 244 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 5/151 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ ++IA AQ +I + A +A G+ L+LF E F+ GY ++ + ++ Sbjct: 1 MRSIRIAAAQTPEFRENIEAALDYAVGVAAQAETDGVALLLFPEGFLQGYLTDEPLARRV 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + S+A + + G +V+G D + N+ V+++ G ++ K +L Sbjct: 61 ALDLASTAFEAVLHRLPKSGPMLVMGLIEIDDGRLFNTAVVVEHGVLLGRYRKAHL---- 116 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICED 152 ++ F +G + D+R GI IC D Sbjct: 117 -LRGEQAFEAGTESPLFAIGDLRFGINICYD 146 >gi|302345701|ref|YP_003814054.1| hydrolase, carbon-nitrogen family [Prevotella melaninogenica ATCC 25845] gi|302150198|gb|ADK96460.1| hydrolase, carbon-nitrogen family [Prevotella melaninogenica ATCC 25845] Length = 294 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 106/252 (42%), Gaps = 24/252 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 +++LKI Q + V DI NI + ++G +L++ EL S Y ED V K Sbjct: 1 MRELKIGFLQQHNVE-DIKNNIERLAEGITNLAQRGAELVILQELHNSLYFCQTED-VNK 58 Query: 60 KSFIQACSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKIN 116 + + + G IV + G+ + +VVI G+I K++ Sbjct: 59 FDLAETIPGPSTGFYGELARELGIVIVTSLFEKRAPGLYHNTAVVIEKDGSIAGKYRKMH 118 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ ++EK F G PI RLG+L+C D W + + QGA+ L Sbjct: 119 IPDDPAYYEKFYFTPGDLGFHPIDTSVGRLGVLVCWDQWY-PEAARLMALQGADMLIYPT 177 Query: 176 ASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGAS 220 A Y K ++R T H LP+I VN+VG + + + F G+S Sbjct: 178 AIGYESSDTDEEKQRQREAWTTVMRGHAVANGLPVIAVNRVGHEPDPSEQTQGIQFWGSS 237 Query: 221 FCFDGQQQLAFQ 232 F Q +L ++ Sbjct: 238 FVAGPQGELLYR 249 >gi|15673084|ref|NP_267258.1| NAD synthetase [Lactococcus lactis subsp. lactis Il1403] gi|25090795|sp|Q9CGJ4|NADE_LACLA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|12724059|gb|AAK05200.1|AE006342_6 NAD-synthetase [Lactococcus lactis subsp. lactis Il1403] gi|326406652|gb|ADZ63723.1| NH(3)-dependent NAD(+) synthetase [Lactococcus lactis subsp. lactis CV56] Length = 274 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 42/255 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ- 322 P+ + + + V L+DY++K F K ++G+SGG DS+L A IA++ + +E Sbjct: 15 PVIDPKEEIRVSVDFLKDYLKKYPFIKSFVLGISGGQDSSLAGRLAQIAIEEMRQETADE 74 Query: 323 -----TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSG 376 I LPY Q+ E+ A A A + P L VN ++ Q +G Sbjct: 75 TYKFVAIRLPY---GVQADEEDAQRALAF-----IQPDVSLTVNIKAAVEGQVAALNEAG 126 Query: 377 IVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 I NI++R R A++ + +L T + +E G+ T +GD PL Sbjct: 127 IEVSDFNKGNIKARQRMITQYAVAGQYQGAVLGTDHAAENITGFFTKFGDGGADLLPLFR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K R + + LG P+I EK P+A+L +P D+ +L Y Sbjct: 187 LNK---------RQGKALLAELGA-----DPAIYEKVPTADLEEGKPGLADEIALGVTYN 232 Query: 488 ILDDIIKRIVENEES 502 +DD + V +E++ Sbjct: 233 DIDDYTEGKVISEDA 247 >gi|295699263|ref|YP_003607156.1| NAD+ synthetase [Burkholderia sp. CCGE1002] gi|295438476|gb|ADG17645.1| NAD+ synthetase [Burkholderia sp. CCGE1002] Length = 286 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 28/226 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPY--KYTSP 333 L +Y+ ++ ++G+SGG+DS A +AV+ L + + LPY + Sbjct: 36 LANYLSNSHLRTYVLGISGGVDSTTAGRLAQLAVERLRGNHYDARFVAVRLPYGKQRDEA 95 Query: 334 QSLEDAAACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 +LE D+ P D ++ F E V NI++R R Sbjct: 96 DALEALRFIRADENLTIDIKPAADAMLESLDKSGVSFKDESQRDFVHGNIKARQRMIAQY 155 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A++ +++ T + +E +G+ T +GD PL L K +V + Sbjct: 156 AVAGARAGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLSKRRV---------RAVAHR 206 Query: 453 LGPLTEVIPPSILEKSPSAE---LRPHQTDQESLP-PYPILDDIIK 494 LG P ++ K P+A+ LRP + D+++ PY +DD ++ Sbjct: 207 LG-----APDALAHKVPTADLEMLRPLRPDEDAYGIPYDAIDDFLE 247 >gi|293369815|ref|ZP_06616390.1| hydrolase, carbon-nitrogen family [Bacteroides ovatus SD CMC 3f] gi|292635092|gb|EFF53609.1| hydrolase, carbon-nitrogen family [Bacteroides ovatus SD CMC 3f] Length = 294 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+ I Q + DI N+ ++ E G LI+ EL S Y Sbjct: 1 MRKIKVGIIQQSNT-ADIKANLMNLAKSIEACAAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTNLFDLAEPIPGPSTGFYSELAAANKVVLVTSLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ- 211 GAE L A + + K ++ + + Q +H LP+I VN+VG GQ Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSGQT 228 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + ++F G SF Q + Q + +N + E Sbjct: 229 NGILFWGNSFVAGPQGEFLAQAGNDQPENMIVE 261 >gi|330685567|gb|EGG97213.1| NAD+ synthase [Staphylococcus epidermidis VCU121] Length = 273 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 38/229 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCA---AIAVDALGKENVQ----TIMLPYKYTSPQ 334 ++ YVQ ++F K +++G+SGG DS L +AV+ L +E + + LPY S Sbjct: 31 VKSYVQSHSFIKSLVLGISGGQDSTLAGRLVQLAVNELREEGRECQFIAVKLPYGVQS-- 88 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ-----SRIRGN 389 DA AL I + + LQE +GI + Q +R R Sbjct: 89 ---DADEVEDALTFINPDQTITVNIKPAVDTSVKSLQE--AGIQLTDFQKGNEKARERMK 143 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 + +++++ +++ T + +E G+ T YGD + PL L K Q L + Sbjct: 144 VQFSIASNQSGIVVGTDHSAENITGFYTKYGDGAADIAPLFGLNKRQGRSLLKY------ 197 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + EK+P+A+L +P D+E+L Y +DD ++ Sbjct: 198 ---LGA-----PAHLYEKTPTADLEEDKPQLPDEEALGLTYNDIDDYLE 238 >gi|256848178|ref|ZP_05553622.1| NAD+ synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256715238|gb|EEU30215.1| NAD+ synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 275 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 36/215 (16%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------IMLPYKYTSPQSL 336 DY++ +++G+SGG DS+L + A+ K QT + LPY + ++ Sbjct: 33 DYLKSTGMKTLVLGISGGQDSSLAGRLCQMAVEKLRQQTGQQYQFIAVRLPYGEQADEA- 91 Query: 337 EDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 DA + + ++ P D + + + + G NI++R R + Sbjct: 92 -DAMSAINDFIHPDRTIRVNIKPATDAMVAALTTAGSHISDFNKG----NIKARQRMIVQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAIAGEFGGAVVGTDHAAEAVTGFYTKFGDGGADLTPLSGLDK---------RQGRALME 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 LG P + EK+P+A+L RP D+++L Sbjct: 198 YLG-----APAHLYEKTPTADLEEDRPALPDEQAL 227 >gi|224437994|ref|ZP_03658933.1| hypothetical protein HcinC1_08460 [Helicobacter cinaedi CCUG 18818] gi|313144440|ref|ZP_07806633.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129471|gb|EFR47088.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 295 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 18/152 (11%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D G+I K+++P+ +F+EK F G +PI +LG+LIC D W Sbjct: 100 NTAVVFDTDGSIAGKYRKMHIPDDPQFYEKFYFTPGDLGFEPIQTSLGKLGVLICWDQW- 158 Query: 156 NSNICKHLKKQGAEFLFSLNASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GA L A ++ K +++ + Q H LP + +N+ Sbjct: 159 YPEAARIMALKGAGILIYPTAIGWFDEDSLEEKKRQKEAWIAVQRGHSVANGLPTLAINR 218 Query: 208 VGGQDE-------LIFDGASFCFDGQQQLAFQ 232 VG + + + F G+SF FD Q L Q Sbjct: 219 VGFEKDNSGNAQGIRFWGSSFAFDAQGALLAQ 250 >gi|315046686|ref|XP_003172718.1| aliphatic nitrilase [Arthroderma gypseum CBS 118893] gi|311343104|gb|EFR02307.1| aliphatic nitrilase [Arthroderma gypseum CBS 118893] Length = 335 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 16/154 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 LK+AI Q P D+AG++ K EA + G L+ F E +I GYP P D + Sbjct: 6 LKVAITQAQPKWLDLAGSVEKTVNLITEAAKGGARLVAFPECWIPGYPGWIWQRPVDPII 65 Query: 59 KKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGV-LNSVVILDAGNIIAVR 112 ++Q S+ ++ +KS +V+GF D V + +I G ++ R Sbjct: 66 NTKYVQNSLAVQSAEMNKIKSAAKANNIAVVLGFVEAIDTHSVYIAQAIISPKGELLMHR 125 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLG 146 K+ P + E+ F G +D D+ G Sbjct: 126 RKLK-PTH---MERTVFGDGSGSDLTNVADVDFG 155 >gi|417384|sp|Q03217|NRL2_RHORH RecName: Full=Aliphatic nitrilase gi|216934|dbj|BAA01994.1| nitrilase [Rhodococcus rhodochrous] gi|1665735|dbj|BAA11037.1| nitrilase [Rhodococcus rhodochrous] Length = 366 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 22/163 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV------- 57 K+A Q PV D A + K EA R G +L+ F E+FI GYP V Sbjct: 8 FKVAAVQAQPVWFDAAKTVDKTVSIIAEAARNGCELVAFPEVFIPGYPYHIWVDSPLAGM 67 Query: 58 ------FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIA 110 + ++ + S + L D +VVG +D + + +++DA G ++A Sbjct: 68 AKFAVRYHENSLTMDSPHVQRLLDAARDHNIAVVVGISERDGGSLYMTQLVIDADGQLVA 127 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILIC 150 R K+ P + E+ + G +D V+ D+ RLG L C Sbjct: 128 RRRKLK-PTHV---ERSVYGEGNGSDISVY-DMPFARLGALNC 165 >gi|332970518|gb|EGK09507.1| NH(3)-dependent NAD(+) synthetase [Desmospora sp. 8437] Length = 276 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 31/226 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ-----TIMLPYKYTSPQ 334 +++YV+ +++G+SGG DS L A +A++ L KE+ + + LPY Q Sbjct: 31 IKEYVKATATKGLVLGISGGQDSTLAGKLAQMAMEELRKESGERFRFVAMRLPY---GVQ 87 Query: 335 SLEDAAACAKALGCKYDVLPIH--DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 ED A A + L H D V+ + V N+++R R Sbjct: 88 KDEDDAQQALRFIQPDETLTFHIQDAVDGSVRAFHDATGQTLPDFVKGNVKARERMIAQY 147 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++ +++ T + +E G+ T YGD PL L K Q QL + Sbjct: 148 QIAGVRNLLVVGTDHAAEAVTGFFTKYGDGGCDLVPLYGLNKRQGKQLLKHLGA------ 201 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P S+ K P+A+L RP + D+E L Y +DD ++ Sbjct: 202 --------PSSLYMKIPTADLLDDRPGRADEEELGITYEQIDDYLE 239 >gi|291037330|ref|ZP_06568294.1| nitrilase [Gluconacetobacter xylinus NBRC 3288] Length = 324 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 23/174 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIA-GNIAKARRAREEANRQGMDLILFTELFISGYP------- 52 M + ++ A Q++PV+GD G K +A EA +G+ L +F E F+ YP Sbjct: 1 MSRIVRAAAIQISPVLGDDGLGTARKVCQAIREAAEKGVKLAVFPETFVPYYPYFSFIQP 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 E L + + D + G +V+G +D + N+ +I DA G Sbjct: 61 AFRFGGEHLALYERAVVIPGPVTDMMAEAARQTGMVVVLGVNERDFGTLYNTQIIFDATG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 I+ R KI P Y HE+ + G + V R+G L C W++ N Sbjct: 121 EILLKRRKIT-PTY---HERMVWGQGDGSGLKVVESAAGRIGALAC---WEHYN 167 >gi|114777167|ref|ZP_01452178.1| glycosyl hydrolase, family 10 [Mariprofundus ferrooxydans PV-1] gi|114552312|gb|EAU54795.1| glycosyl hydrolase, family 10 [Mariprofundus ferrooxydans PV-1] Length = 293 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 101/245 (41%), Gaps = 21/245 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKS 75 D A N+A + EA G L++ EL + Y ED + + D L + Sbjct: 16 DKAANLAASIEGIREAAAMGARLVVLQELHGTPYFCQVEDPGYFDLAEPIPGPSSDILGA 75 Query: 76 DTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG- 132 + G IV + G+ N+ V+L+A G+I + K+++P+ ++EK F G Sbjct: 76 VAAELGVVIVASLFERRAAGLYHNTAVVLEADGSIAGIYRKMHIPDDPAYYEKFYFTPGD 135 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKR 187 +PI RLG+L+C D W + + GA+ L A + + +L++R Sbjct: 136 IGFEPIDTSVGRLGVLVCWDQW-YPEAARLMAMAGADMLIYPTAIGWAPSEPEDEQLRQR 194 Query: 188 HEIVTGQISHV---HLPIIYVNQVG------GQDELIFDGASFCFDGQQQLAFQMKHFSE 238 H LP+I N+ G + L F G SF Q ++ + E Sbjct: 195 DAWEISMRGHAVANGLPVICANRTGFEAHPYEESGLEFWGGSFVVGPQGEM-LSVAAADE 253 Query: 239 QNFMT 243 Q+ M Sbjct: 254 QSVMV 258 >gi|332299237|ref|YP_004441158.1| N-carbamoylputrescine amidase [Porphyromonas asaccharolytica DSM 20707] gi|332176300|gb|AEE11990.1| N-carbamoylputrescine amidase [Porphyromonas asaccharolytica DSM 20707] Length = 291 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 25/255 (9%) Query: 28 RAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIV 85 R R+ A+ +G +LI+ EL Y ED+ + ++ + + G IV Sbjct: 24 RVRQLAH-EGAELIVLQELHNGLYFCQTEDVALFDQAETIPGPSTESFGALARELGVVIV 82 Query: 86 VGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG-YSNDPIVFRD 142 + + G+ N+ V+L+ IA R K+++P+ ++EK F G +PI Sbjct: 83 LSLFEKRATGLYHNTAVVLERDGSIAGRYRKMHIPDDPAYYEKFYFTPGDLGFEPIDTSV 142 Query: 143 IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--SPYYHNKLKKRHEIVTGQI---SH 197 RLGILIC D W + + +GAE L A + Y +++ +I Q+ H Sbjct: 143 GRLGILICWDQWY-PEAARLMALKGAELLIYPTAIGTAAYDTPEEQQRQIDAWQLVQRGH 201 Query: 198 V---HLPIIYVNQVG------GQDELI-FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY 247 +LP+I VN+VG G E I F G SF Q ++ + E + E Sbjct: 202 AVANNLPVIAVNRVGYEPDPSGVTEGIQFWGHSFVTGQQGEMLCDLSQTEEAGAVVELDL 261 Query: 248 DQQ---LSQWNYMSD 259 ++ W Y+ D Sbjct: 262 ERTELVRRWWPYLRD 276 >gi|32473846|ref|NP_866840.1| beta-alanine synthetase [Rhodopirellula baltica SH 1] gi|32444382|emb|CAD74381.1| beta-alanine synthetase [Rhodopirellula baltica SH 1] gi|327537473|gb|EGF24196.1| carbon-nitrogen hydrolase family protein [Rhodopirellula baltica WH47] Length = 288 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 27/250 (10%) Query: 31 EEANRQGMDLILFTELFISGYPPE-----DLVFKKSFIQACSSAIDTLKSDTHDGGAGIV 85 E+A +G ++ ELF + YP + + +S + A+ + GIV Sbjct: 30 EKAAAEGAQIVCLQELFATCYPCQSEDHDNFDLAESIPGPTTEALQPVAERL-----GIV 84 Query: 86 VGFP--RQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV-F 140 + P + GV NS V++DA G+I V K+++P+ ++EK FI G ++ Sbjct: 85 IVAPLFERRAPGVYHNSAVVIDADGSIAGVYRKMHIPDDPLYYEKFYFIPGDLGFKVIPT 144 Query: 141 RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK-----KRHEIVTGQI 195 R +LG+ IC D W + GAE L A + + + +R +T Sbjct: 145 RFAKLGVGICWDQW-FPEAARLFALAGAEILLYPTAIGWIDEEKEEFGEGQRDAWMTAMR 203 Query: 196 SHVHLPIIYV---NQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY---DQ 249 +H IY+ N+VG + + F G+SF + ++ Q S+Q + + D Sbjct: 204 AHAIANGIYLGAPNRVGIEGRVEFWGSSFIASPRGEILSQGDCSSDQIVSADCQFADIDV 263 Query: 250 QLSQWNYMSD 259 + W ++ D Sbjct: 264 VRTHWPFLRD 273 >gi|332560420|ref|ZP_08414738.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodobacter sphaeroides WS8N] gi|332274218|gb|EGJ19534.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodobacter sphaeroides WS8N] Length = 280 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 31/230 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA AQL+PV GD +A A A G LI+F E F++G +D + + +Q Sbjct: 1 MKIAFAQLSPVHGDTPATVALVAEAARAAAADGARLIVFPECFLTGGSFDD---RAALLQ 57 Query: 65 ACSSAIDTLKSD-------THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A A+D + D + +VVGF ++ LN+ ++ II + K++L Sbjct: 58 A---AVDIERGDLEPLLLAAREADIHVVVGFYQKSGPQALNTAALIGPEGIIGLHHKMHL 114 Query: 118 P-----NYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEF 170 P +++ + I G P VF R+G+ IC +I + + + L +GAE Sbjct: 115 PFMIGDRFADIPQ----IEG----PSVFDTAIGRIGLAICYEI-RFPEVIRTLALEGAEL 165 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + A P L V + V+ + N++ D + F G+S Sbjct: 166 VVLPAAWPEAARILPDLFSRVRAAENFVYF--LSSNRIDVDDGMAFMGSS 213 >gi|256425428|ref|YP_003126081.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Chitinophaga pinensis DSM 2588] gi|256040336|gb|ACU63880.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Chitinophaga pinensis DSM 2588] Length = 242 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 19/239 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ +AQ V GDI NI ++ + A G D I+F EL I+GY P + K+ + Sbjct: 1 MKLCVAQARAVKGDILTNIENHKKIIDLAVSNGADTIIFPELSITGYEPT--LAKELATE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + + + I VG P + G+ S+V+ V K Y Sbjct: 59 LHDERLNVFQDISDEKAITIGVGVPLKTAAGITISMVLFQPQESRHVYAK----KYLHAD 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK---KQGAEFLF--SLNASPY 179 E F+SG S+ ++ D + + IC ++ ++ +H++ K GA+F S+ ++ Sbjct: 115 EDPYFVSGESSLSLLGEDGDVALAICYEL----SVPQHVEDAYKCGAQFYLASSVKSTGG 170 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 N + I + ++ N VG D G S +D + Q+ +E Sbjct: 171 IENAFDRLSRIGC----EYDMMVLLSNAVGESDGFQCAGKSAVWDSTGAVLEQLDATNE 225 >gi|126700352|ref|YP_001089249.1| putative carbon-nitrogen hydrolase [Clostridium difficile 630] gi|255307777|ref|ZP_05351948.1| putative carbon-nitrogen hydrolase [Clostridium difficile ATCC 43255] gi|115251789|emb|CAJ69624.1| putative nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium difficile] Length = 268 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 15/256 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+KI I Q + V+G++ NI KA ++ +QG D+I ELF +GY E L K Sbjct: 1 MGRKVKIGIIQQHSVLGNVKKNIEKAVEMIDDLGKQGADIICLPELFATGYNLESLGGVK 60 Query: 61 S--FIQACSSAIDTLKSDTHDGGAGIVV---GFPRQDQEGVLNSVVILD-AGNIIAVRDK 114 + I+ + I+ S+ ++ G + V NS VI D G I+ K Sbjct: 61 TLELIREHNKYIEESMSEAAKRNNVYLISPYGTLEKGSTHVYNSAVIFDRKGKIMGEYCK 120 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +L + + + G + D R G++IC D + + L +G+E +F Sbjct: 121 NHL-----WSLEAVYFKGGEKVEVYDADFGRFGVMICYDA-GFPEVSRELTLKGSEIIFI 174 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +A + + V+ + + + VN V LI G S + + + Q+ Sbjct: 175 PSAWRIQDEDMWDLN--VSQRALENTVYTVGVNLVSNDSNLILFGKSKICNPRGTVITQL 232 Query: 234 KHFSEQNFMTEWHYDQ 249 + E+ ++E D+ Sbjct: 233 DTYREKYVLSEIDLDE 248 >gi|328778384|ref|XP_392994.4| PREDICTED: probable glutamine-dependent NAD(+) synthetase-like isoform 1 [Apis mellifera] Length = 746 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 65/269 (24%) Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA-------VDALGK 318 Y + EE + AC L DY++++ + LSGG+DSA A + V+++ K Sbjct: 339 YHTVNEEISMAPACWL--WDYLRRSCQGGFFLPLSGGVDSASSACMVYSMCDMIVNSVKK 396 Query: 319 ENVQTIM--------LPYKYTSPQSLED--------------------AAACAKALGCKY 350 ++Q + Y T P+ L + AA A +G + Sbjct: 397 GDLQVLSDIRKIVGDFEYVPTDPKQLCNILLVTCYMATENSSSETKTRAAELANQIGSYH 456 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEP----------SGIVAENIQSRIR-------GNILMA 393 + I V+ S+ Q + P + +NIQ+R+R +++ Sbjct: 457 HSIIIDAAVSAILSIFQQVAKLTPRFKVQGGSPRENLALQNIQARLRMVISYLFAQLMLW 516 Query: 394 LSNHSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW-RNSHGITS 451 + +L L +SN E GY T Y S NP+ + K + S+ R HGIT+ Sbjct: 517 VRGRPGGLLVLGSSNVDEALRGYFTKYDCSSADINPIGGIAKNDLKSFLSYFRKKHGITA 576 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 +IL+ P+AEL P Q Q Sbjct: 577 ---------LDNILDAPPTAELEPLQAGQ 596 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 65/179 (36%), Gaps = 25/179 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A+ LN D GN + ++ +EA G EL I GY ED ++ Sbjct: 1 MGRTVTVAVCTLNQWALDFDGNSRRILQSIQEAKDAGATYRSGPELEICGYSCEDHFYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + + T I VG P + N V I+ +R K+ + Sbjct: 61 DTLFHSWEVLAMILKSTVAEDMLIDVGMPVMHKNVTYNCRVAFLNRRILLIRPKMQMCED 120 Query: 121 SEFHEKRTF-----------------ISGYSNDPIV--------FRDIRLGILICEDIW 154 + E R F IS +N +V RD +G ICE++W Sbjct: 121 GNYRESRWFSPWTKERMVEDYFLPRMISQITNQTVVPFGDAVISTRDTCIGFEICEELW 179 >gi|57867391|ref|YP_189018.1| NAD synthetase [Staphylococcus epidermidis RP62A] gi|282874539|ref|ZP_06283424.1| NAD+ synthetase [Staphylococcus epidermidis SK135] gi|71152007|sp|Q5HN23|NADE_STAEQ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|57638049|gb|AAW54837.1| NH(3)-dependent NAD+ synthetase [Staphylococcus epidermidis RP62A] gi|281296678|gb|EFA89187.1| NAD+ synthetase [Staphylococcus epidermidis SK135] gi|329734708|gb|EGG71014.1| NAD+ synthase [Staphylococcus epidermidis VCU045] gi|329734823|gb|EGG71128.1| NAD+ synthase [Staphylococcus epidermidis VCU028] Length = 275 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 36/228 (15%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSL 336 ++ YV+ ++F +++G+SGG DS L A +AV+ L +E N + I + Y Q Sbjct: 31 IKAYVKSHSFIQTLVLGISGGQDSTLTGKLAQLAVNELKEEGRNCKFIAVKLPYGVQQ-- 88 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRGNI 390 DA AL + P + + Q +Q +GI + Q +R R + Sbjct: 89 -DAHEVEDALEF---INPDTTYTVNIKPAVDQSVQSLSEAGIKLTDFQKGNEKARERMKV 144 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 +++++++ ++L T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 145 QFSIASNTQGIVLGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGKQLLAY------- 197 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 198 --LGA-----PKHLYEKVPTADLEDDKPQLPDEEALGVSYHDIDDYLE 238 >gi|251809885|ref|ZP_04824358.1| NAD synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|293367775|ref|ZP_06614424.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus epidermidis M23864:W2(grey)] gi|251806550|gb|EES59207.1| NAD synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|291318114|gb|EFE58511.1| NH(3)-dependent NAD(+) synthetase [Staphylococcus epidermidis M23864:W2(grey)] Length = 277 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 36/228 (15%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSL 336 ++ YV+ ++F +++G+SGG DS L A +AV+ L +E N + I + Y Q Sbjct: 33 IKAYVKSHSFIQTLVLGISGGQDSTLTGKLAQLAVNELKEEGRNCKFIAVKLPYGVQQ-- 90 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRGNI 390 DA AL + P + + Q +Q +GI + Q +R R + Sbjct: 91 -DAHEVEDALEF---INPDTTYTVNIKPAVDQSVQSLSEAGIKLTDFQKGNEKARERMKV 146 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 +++++++ ++L T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 147 QFSIASNTQGIVLGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGKQLLAY------- 199 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 200 --LGA-----PKHLYEKVPTADLEDDKPQLPDEEALGVSYHDIDDYLE 240 >gi|221369030|ref|YP_002520126.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodobacter sphaeroides KD131] gi|221162082|gb|ACM03053.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodobacter sphaeroides KD131] Length = 282 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 31/230 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA AQL+PV GD +A A A G LI+F E F++G +D + + +Q Sbjct: 3 MKIAFAQLSPVHGDTPATVALVAEAARAAAADGARLIVFPECFLTGGSFDD---RAALLQ 59 Query: 65 ACSSAIDTLKSD-------THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A A+D + D + +VVGF ++ LN+ ++ II + K++L Sbjct: 60 A---AVDIERGDLAPLLLAAREADIHVVVGFYQKSGPQALNTAALIGPEGIIGLHHKMHL 116 Query: 118 P-----NYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEF 170 P +++ + I G P VF R+G+ IC +I + + + L +GAE Sbjct: 117 PFMIGDRFADIPQ----IEG----PSVFDTAIGRIGLAICYEI-RFPEVIRTLALEGAEL 167 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + A P L V + V+ + N++ D + F G+S Sbjct: 168 VVLPAAWPEAARILPDLFSRVRAAENFVYF--LSSNRIDVDDGMAFMGSS 215 >gi|27468514|ref|NP_765151.1| NAD synthetase [Staphylococcus epidermidis ATCC 12228] gi|38372354|sp|Q8CNP1|NADE_STAES RecName: Full=NH(3)-dependent NAD(+) synthetase gi|27316061|gb|AAO05195.1|AE016749_141 NAD synthetase [Staphylococcus epidermidis ATCC 12228] Length = 275 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 36/228 (15%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSL 336 ++ YV+ ++F +++G+SGG DS L A +AV+ L +E N + I + Y Q Sbjct: 31 IKAYVKSHSFIQTLVLGISGGQDSTLTGKLAQLAVNELKEEGRNCKFIAVKLPYGVQQ-- 88 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRGNI 390 DA AL + P + + Q +Q +GI + Q +R R + Sbjct: 89 -DAHEVEDALEF---INPDTTYTVNIKPAVDQSVQSLSEAGIKLTDFQKGNEKARERMKV 144 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 +++++++ ++L T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 145 QFSIASNTQGIVLGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGKQLLAY------- 197 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 198 --LGA-----PKHLYEKVPTADLEDDKPQLPDEEALGVSYHDIDDYLE 238 >gi|322832743|ref|YP_004212770.1| NAD+ synthetase [Rahnella sp. Y9602] gi|321167944|gb|ADW73643.1| NAD+ synthetase [Rahnella sp. Y9602] Length = 276 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 41/265 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y+ + F K +++G+SGG DS L + A+ + QT Y++ + P ++ Sbjct: 30 LKSYLLAHPFIKTLVLGISGGQDSTLTGKLCQTAISELRAQTNDSAYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALG-CKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRGNILMA 393 D + C A+ + D + ++ N + + L+E E S + N ++R R + Sbjct: 90 DESDCQDAIAFIQPDQVLTVNIKNAVLASEAT-LREIGIELSDFIKGNEKARERMKAQYS 148 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ K +++ T + +E G+ T YGD NP+ L K R + L Sbjct: 149 IAGMKKGVVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQGKALLKEL 199 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQE 509 G P + K+P+A+L RP D+ +L Y ++DD ++ ++ Sbjct: 200 G-----CPEHLYTKAPTADLEDNRPALPDEAALGVTYELIDDYLE------------GKK 242 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPV 534 +D+ +E +E+K RQ PV Sbjct: 243 IDDKYATIIEGWYLRTEHK-RQPPV 266 >gi|224092113|ref|XP_002309478.1| predicted protein [Populus trichocarpa] gi|222855454|gb|EEE93001.1| predicted protein [Populus trichocarpa] Length = 370 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 KI + QL+ V D NIA AR+A EEA +G L++ E++ S Y + I Sbjct: 88 FKIGLCQLS-VTADKERNIAHARKAIEEAAAKGAKLVMLPEIWNSPYSNDCFPVYAEDID 146 Query: 65 ACSSAIDTLKSDTHDGG---AGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL-- 117 A A + + G IV G P + + + N+ + D+ G + A KI+L Sbjct: 147 AGGEASPSTAMLSEAAGLLKVTIVGGSIPERSGDRLYNTCCVFDSDGKLKAKHRKIHLFD 206 Query: 118 ---PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 P F E +T +G + + R+GI IC DI Sbjct: 207 IDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDI 245 >gi|125624277|ref|YP_001032760.1| NAD synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|189083394|sp|A2RL82|NADE_LACLM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|124493085|emb|CAL98049.1| NAD+ synthase [Lactococcus lactis subsp. cremoris MG1363] gi|300071058|gb|ADJ60458.1| NAD synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 274 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 33/231 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + V L+DY++K F K ++G+SGG DS+L +A A+ + +T Sbjct: 15 PIIDPKEEIRVSVDFLKDYLKKYPFIKSFVLGISGGQDSSLAGRLAQIAIEEMRQETADA 74 Query: 327 PYKYTS------PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 YK+ + Q+ E+ A A A K DV VN ++ Q +G+ Sbjct: 75 SYKFVAVRLPFGVQADEEDAQRALAF-IKPDV---SLAVNIKAAVEGQVAALNEAGVEVS 130 Query: 381 -----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 NI++R R A++ + +L T + +E G+ T +GD PL L K Sbjct: 131 DFNKGNIKARQRMITQYAVAGQYQGAVLGTDHAAENITGFFTKFGDGGADLLPLFRLNK- 189 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 R + + LG P+I EK P+A+L +P D+ +L Sbjct: 190 --------RQGKALLAELGA-----DPAIYEKVPTADLEEGKPGLADEIAL 227 >gi|329726928|gb|EGG63386.1| NAD+ synthase [Staphylococcus epidermidis VCU144] Length = 275 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 36/228 (15%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIMLPYKYTSPQSL 336 ++ YV+ ++F +++G+SGG DS L A +AV+ L +E N + I + Y Q Sbjct: 31 IKAYVKSHSFIQTLVLGISGGQDSTLTGKLAQLAVNELKEEGRNCKFIAVKLPYGVQQ-- 88 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAENIQ-----SRIRGNI 390 DA AL + P + + Q +Q +GI + Q +R R + Sbjct: 89 -DAHEVEDALEF---INPDTTYTVNIKPAVDQSVQSLSEAGIKLTDFQKGNEKARERMKV 144 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 +++++++ ++L T + +E G+ T YGD + P+ L K Q QL ++ Sbjct: 145 QFSIASNTQGIVLGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGKQLLAY------- 197 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + EK P+A+L +P D+E+L Y +DD ++ Sbjct: 198 --LGA-----PKHLYEKVPTADLEDDKPQLPDEEALGVSYHDIDDYLE 238 >gi|301633328|gb|ADK86882.1| NAD+ synthase [Mycoplasma pneumoniae FH] Length = 248 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 16/123 (13%) Query: 363 FSLMSQFLQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + M Q L +P +VA N+++R+R L + ++L T N E S+GY T +G Sbjct: 90 YRAMLQALTIDPQKELMVAGNLKARLRMACLYTHAQKHNYLVLGTGNFIEYSLGYFTKWG 149 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D + PL L K+ V+ L+ N +P ++E++P+A L QTD+ Sbjct: 150 DGACDVAPLAFLLKSDVYALSQHFN--------------VPELVIERAPTASLFAGQTDE 195 Query: 481 ESL 483 + Sbjct: 196 AEM 198 >gi|237713220|ref|ZP_04543701.1| beta-ureidopropionase [Bacteroides sp. D1] gi|262406640|ref|ZP_06083189.1| N-carbamoylputrescine amidase [Bacteroides sp. 2_1_22] gi|294643421|ref|ZP_06721239.1| hydrolase, carbon-nitrogen family [Bacteroides ovatus SD CC 2a] gi|294807780|ref|ZP_06766571.1| hydrolase, carbon-nitrogen family [Bacteroides xylanisolvens SD CC 1b] gi|229446687|gb|EEO52478.1| beta-ureidopropionase [Bacteroides sp. D1] gi|262355343|gb|EEZ04434.1| N-carbamoylputrescine amidase [Bacteroides sp. 2_1_22] gi|292641235|gb|EFF59435.1| hydrolase, carbon-nitrogen family [Bacteroides ovatus SD CC 2a] gi|294445018|gb|EFG13694.1| hydrolase, carbon-nitrogen family [Bacteroides xylanisolvens SD CC 1b] Length = 294 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+K+ I Q + DI N+ ++ E G LI+ EL S Y Sbjct: 1 MKKIKVGIIQQSNT-ADIRVNLMNLAKSIEACAAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTNLFDLAEPIPGPSTGFYSELAAANKVVLVTSLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ- 211 GAE L A + + K ++ + + Q +H LP+I VN+VG GQ Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQCAHAVANGLPVISVNRVGHEPDPSGQT 228 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + ++F G SF Q + Q + +N + E Sbjct: 229 NGILFWGNSFVAGPQGEFLAQAGNDHPENMVVE 261 >gi|225619361|ref|YP_002720587.1| carbon-nitrogen hydrolase family protein [Brachyspira hyodysenteriae WA1] gi|225214180|gb|ACN82914.1| carbon-nitrogen hydrolase family protein [Brachyspira hyodysenteriae WA1] Length = 261 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 9/127 (7%) Query: 35 RQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAI--DTLKSDTHDGGAGIVVGFPRQD 92 ++ DLI+ EL +GY E+ K+ + I + L + I+ GF + Sbjct: 29 KEKSDLIVLPELSSNGYLFENRDELKNTAENIKYGIFINNLSEISKKYDTSIIAGFAEKY 88 Query: 93 QEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVF--RDIRLGILI 149 ++ + NS VI+D GNI V KI+L ++ EKR F SG +N ++F + + + I Sbjct: 89 EDKIYNSAVIIDKGNIKGVYRKIHLSDF----EKRFFDSGDINNADLIFNINGVNISVQI 144 Query: 150 CEDIWKN 156 C D+W N Sbjct: 145 CFDLWFN 151 >gi|126464149|ref|YP_001045262.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodobacter sphaeroides ATCC 17029] gi|126105960|gb|ABN78490.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodobacter sphaeroides ATCC 17029] Length = 280 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 31/230 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA AQL+PV GD +A A A G LI+F E F++G +D + + +Q Sbjct: 1 MKIAFAQLSPVHGDTPATVALVAEAARAAAADGARLIVFPECFLTGGSFDD---RAALLQ 57 Query: 65 ACSSAIDTLKSD-------THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A A+D + D + +VVGF ++ LN+ ++ II + K++L Sbjct: 58 A---AVDIERGDLEPLLLAAREADIHVVVGFYQKSGPQALNTAALIGPEGIIGLHHKMHL 114 Query: 118 P-----NYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEF 170 P +++ + I G P VF R+G+ IC +I + + + L +GAE Sbjct: 115 PFMIGDRFADIPQ----IEG----PSVFDTAIGRIGLAICYEI-RFPEVIRTLALEGAEL 165 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + A P L V + V+ + N++ D + F G+S Sbjct: 166 VVLPAAWPEAARILPDLFSRVRAAENFVYF--LSSNRIDVDDGMAFMGSS 213 >gi|254976332|ref|ZP_05272804.1| putative carbon-nitrogen hydrolase [Clostridium difficile QCD-66c26] gi|255093717|ref|ZP_05323195.1| putative carbon-nitrogen hydrolase [Clostridium difficile CIP 107932] gi|255315469|ref|ZP_05357052.1| putative carbon-nitrogen hydrolase [Clostridium difficile QCD-76w55] gi|255518132|ref|ZP_05385808.1| putative carbon-nitrogen hydrolase [Clostridium difficile QCD-97b34] gi|255651248|ref|ZP_05398150.1| putative carbon-nitrogen hydrolase [Clostridium difficile QCD-37x79] gi|260684312|ref|YP_003215597.1| putative carbon-nitrogen hydrolase [Clostridium difficile CD196] gi|260687971|ref|YP_003219105.1| putative carbon-nitrogen hydrolase [Clostridium difficile R20291] gi|306521092|ref|ZP_07407439.1| putative carbon-nitrogen hydrolase [Clostridium difficile QCD-32g58] gi|260210475|emb|CBA64945.1| putative carbon-nitrogen hydrolase [Clostridium difficile CD196] gi|260213988|emb|CBE06097.1| putative carbon-nitrogen hydrolase [Clostridium difficile R20291] Length = 268 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 15/256 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+KI I Q + V+GD+ NI KA ++ + G D+I ELF +GY E L K Sbjct: 1 MGRKVKIGIIQQHSVLGDVKKNIEKAVEMIDDLGKHGADIICLPELFATGYNLESLGGVK 60 Query: 61 S--FIQACSSAIDTLKSDTHDGGAGIVV---GFPRQDQEGVLNSVVILD-AGNIIAVRDK 114 + I+ + I+ S+ ++ G + V NS VI D G I+ K Sbjct: 61 TLELIREHNKYIEESMSEAAKRNNVYLISPYGTLEKGSTHVYNSAVIFDRKGKIMGEYCK 120 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +L + + + G + D R G++IC D + + L +G+E +F Sbjct: 121 NHL-----WSLEAVYFKGGEKVEVYDADFGRFGVMICYDA-GFPEVSRELTLKGSEIIFI 174 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +A + + V+ + + + VN V LI G S + + + Q+ Sbjct: 175 PSAWRIQDEDMWDLN--VSQRALENTVYTVGVNLVSNDSNLILFGKSKICNPRGTVITQL 232 Query: 234 KHFSEQNFMTEWHYDQ 249 + E+ ++E D+ Sbjct: 233 DTYREKYVLSEIDLDE 248 >gi|167033592|ref|YP_001668823.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida GB-1] gi|166860080|gb|ABY98487.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas putida GB-1] Length = 273 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 19/231 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + QL GD A N+ + A + G DL++F E ++G+P ED + + + + Sbjct: 1 MKVELVQLAGRDGDTAHNLQRTIEAINNCH-AGTDLLVFPETQLTGFPTEDNIGQVA--E 57 Query: 65 ACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A +I ++ +VVG +G + +L +A+ +Y + Sbjct: 58 ALDGPSITAIQQAACARDVAVVVGMAEAAVDGNFYNTTVLVTPEGVAL-------SYRKT 110 Query: 124 H----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 H + F G +F+ +R+G+LIC DI + + L + GAE + N + Sbjct: 111 HLWASDSGVFTPGDRYATTLFKGVRVGLLICFDI-EFPESARALGQLGAELIIVTNGNMD 169 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFDGQQQL 229 + K ++ + + VN+VG G L+F G S D QL Sbjct: 170 PYGPTHK--TAISARAMENQAFAVMVNRVGDGDGGLVFAGGSAVVDPYGQL 218 >gi|149175148|ref|ZP_01853771.1| putative carbon-nitrogen hydrolase [Planctomyces maris DSM 8797] gi|148846126|gb|EDL60466.1| putative carbon-nitrogen hydrolase [Planctomyces maris DSM 8797] Length = 318 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 28/184 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ ++IA+ Q GD A N+ + R ++A QG +++ F E I Y K+ Sbjct: 1 MRDIRIAVVQFEHRNGDKAFNLQRIRELSQQAVEQGAEIVSFHECCIPAYTFVQSFSKEE 60 Query: 62 FIQACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 + D L + + G I+ G DQ+ V N+ V +D ++A Sbjct: 61 LLDLAEQVPDGPSTRELMQISQEVGVPILAGLFEVDQDEVYNTYVCVDGNELVA------ 114 Query: 117 LPNYSEFHEKRTFISGY---SNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQ---GA 168 F + F++ + ++ +VF R R GILIC D +N+ ++++ GA Sbjct: 115 -----RFRKLHAFVNSHLASGSEYVVFELRGCRCGILICYD----NNLVENVRMTAMLGA 165 Query: 169 EFLF 172 + +F Sbjct: 166 DIIF 169 >gi|94676577|ref|YP_588737.1| NAD synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219727|gb|ABF13886.1| NAD+ synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 284 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 36/229 (15%) Query: 283 LRDYVQKN-NFHKVIIGLSGGIDSALCAAI---AVDAL----GKENVQTIMLPYKYTSPQ 334 L+ Y++K + H +++G+SGG DS L + A++ L GK N Q I + Y + Sbjct: 41 LKSYLKKYPSLHTLVLGISGGQDSTLAGKLCQLAIEELRYDTGKHNYQFIAVRLPYGEQK 100 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGN 389 D A C + I +N S+ + + +G++ N ++R R Sbjct: 101 ---DEADCNDVINFIQPDRVIR--INIKNSIQASEITLRSAGLILSDFLKGNEKARERMK 155 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 + ++++ + +++ T+N +E G+ T YGD NPL L K QV Sbjct: 156 VQYSIASLTSGLVVGTNNAAEAITGFFTKYGDGGTDINPLFRLNKRQV------------ 203 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 T+ L L V P + K+P+A+L RP D+ L Y +DD ++ Sbjct: 204 TALLQHL--VCPQHLYLKTPTADLEDERPALPDELVLGVTYTQIDDYLE 250 >gi|317496495|ref|ZP_07954845.1| NAD synthase [Gemella moribillum M424] gi|316913426|gb|EFV34922.1| NAD synthase [Gemella moribillum M424] Length = 273 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 37/229 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGK------ENVQTIMLPYKYTSPQS 335 L+DY++KN+F K +++G+SGG DS LC + A+ + E+ + I + Y + Sbjct: 30 LKDYIKKNSFVKSLVLGISGGQDSTLCGKLCQMAMTELREETGEDYKFIAVRLPYGTQFD 89 Query: 336 LEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGN 389 +D K +G K + I V+ + +G++ N ++R R Sbjct: 90 EDDCNDALKFIGPDKVYTVNIKKAVDASVESLKD------AGVIITDFAKGNEKARERMK 143 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 + +++ + +++ T + +E G+ T YGD PL L K R + Sbjct: 144 VQYSIATMNSGIVVGTDHAAEAITGFYTKYGDGGADIMPLYRLNK---------RQGKAL 194 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + K P+A+L RP D+ +L Y LDD ++ Sbjct: 195 LKKLG-----CPEHLYLKKPTADLEEERPALEDEVALGVSYDNLDDYLE 238 >gi|25028984|ref|NP_739038.1| NAD synthetase [Corynebacterium efficiens YS-314] gi|259508048|ref|ZP_05750948.1| NH(3)-dependent NAD(+) synthetase [Corynebacterium efficiens YS-314] gi|23494271|dbj|BAC19238.1| putative NH3-dependent NAD+ synthase [Corynebacterium efficiens YS-314] gi|259164389|gb|EEW48943.1| NH(3)-dependent NAD(+) synthetase [Corynebacterium efficiens YS-314] Length = 280 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 39/276 (14%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT 323 +P E A+ A V L DY++ ++ ++G+SGG DS + A +AV+ + +E+ Sbjct: 18 VPSIEPAAEVEARVQFLVDYLRVSHARGYVLGISGGQDSTIAGRLAQLAVERIRREDGSD 77 Query: 324 -----IMLPYKYTSPQSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEE 373 + LP+ Q+ ED A A ++ D+++ + + +E Sbjct: 78 HQFVGVRLPHGL---QADEDDALVALDFIQPDRSISINIREATDVLS--AATAAALGIDE 132 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 N+++R R A++ +++ T + +E G+ T YGD + PL L Sbjct: 133 LGDFNKGNVKARQRMVAQYAIAGELGLLVVGTDHAAENVTGFFTKYGDGAADVLPLAGLT 192 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDII 493 K R + LG P S K P+A+L + D+ +LP L Sbjct: 193 K---------RQGALLLQHLGA-----PESTWTKVPTADL---EEDRPALPDEEALGVTY 235 Query: 494 KRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 + I ++++ N E + E +EHL ++KR Sbjct: 236 REI----DTYLENSGEVSPEAAARIEHLWKVGQHKR 267 >gi|229593032|ref|YP_002875151.1| putative hydrolase [Pseudomonas fluorescens SBW25] gi|229364898|emb|CAY52975.1| putative hydrolase [Pseudomonas fluorescens SBW25] Length = 271 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 113/277 (40%), Gaps = 18/277 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++ QL P +GD N A RA A LI+ EL SGY D +++ Sbjct: 1 MTPLRVVCHQLAPRIGDTDYNRALTERAIRRAASLNAQLIVLPELIQSGYVFAD--REEA 58 Query: 62 FIQACSSAIDTL---KSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINL 117 +I + + TL KS + G IV GF + G V NS +++ + V K +L Sbjct: 59 YIASETRDGPTLVLWKSLARELGIIIVAGFCERLSAGQVANSAALVEPTGRLTVYRKAHL 118 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + EK F +G + P++ + R+G++IC D+ + +N Sbjct: 119 WD----REKLIFTAGDAPPPVIDTAVGRIGMMICYDLELPEWVRLAALADADLLCVPVNW 174 Query: 177 SPYYHNKLKKRHEIVTGQISHV--HLPIIYVNQVGGQDELIFDGASFCFDGQQ-QLAFQM 233 + ++ EIV Q + + I ++ G + + + G S D LA Sbjct: 175 PDGPRPEGERPAEIVRVQANAAVNRMFIAACDRHGEERGVRWVGGSVIVDADGYPLAGAA 234 Query: 234 KHFSEQNFMTEWHY----DQQLSQWNYMSDDSASTMY 266 H EQ M E ++ +S N++ D +Y Sbjct: 235 SHPGEQPLMAELPLAEARNKSISDHNHVHQDRRPGLY 271 >gi|326494404|dbj|BAJ90471.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 651 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 64/278 (23%) Query: 260 DSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA------- 312 D MY +EE A +C L DY++++ ++ LSGG DS+ AAI Sbjct: 232 DPIEIMYHCPEEEIAFGPSCWLW--DYLRRSRASGFLLPLSGGADSSSVAAIVGCMCQLV 289 Query: 313 ------------VDA-----------------LGKENVQTIMLPYKYTSPQSLEDAAACA 343 DA L K T+ + + +S + A A Sbjct: 290 IKDINKGDEQVKADAMRIGQYKDGEFPTDSRELAKRLFYTVYMGTENSSEDTRSRAKRLA 349 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV----------AENIQSRIRGNILMA 393 + +G + +PI +V+ F SL + + P V +NIQ+RIR + Sbjct: 350 EEIGSFHFDVPIDSVVSAFLSLFERLTGKRPRYKVDGGSHTENLGLQNIQARIRMVLAFM 409 Query: 394 LSN-----HSKA---MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +++ H+K+ ++L +SN E GY T Y S NP+ + K + W Sbjct: 410 MASLMPWVHNKSGFYLVLGSSNVDEGLRGYLTKYDCSSADINPIGSVSKQDLRAFLRWAA 469 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 + S L + E P P+AEL P + D L Sbjct: 470 VNLQYSSLAEV-EAAP-------PTAELEPIRMDYNQL 499 >gi|299534506|ref|ZP_07047839.1| NAD synthetase [Lysinibacillus fusiformis ZC1] gi|298730134|gb|EFI70676.1| NAD synthetase [Lysinibacillus fusiformis ZC1] Length = 274 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 33/214 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ------TIMLPYKYTS 332 L++Y ++ +F K ++G+SGG DS L A +A+D L E + + LPY + Sbjct: 30 LKEYAKRYSFVKGFVLGISGGQDSTLTGKLAQLAIDELNAEEGEMKYSFFAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 Q +DA K K + I D V+ ++ E + V N ++R R + Sbjct: 90 DEQDCQDAIDYIKP--TKVYTVNIKDAVDASVRALTN-AGVELNDFVKGNEKARERMKVQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ + A++L T + +E G+ T +GD P+ L K Q QL Sbjct: 147 YSIAAMNGAVVLGTDHAAEAVTGFYTKFGDGGADLMPIFRLNKRQGKQL----------- 195 Query: 452 GLGPLTEV-IPPSILEKSPSAELRPHQTDQESLP 484 L E+ P + +K P+A+L + D+ SLP Sbjct: 196 ----LAELQCPEHLYKKVPTADL---EEDRPSLP 222 >gi|239617822|ref|YP_002941144.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Kosmotoga olearia TBF 19.5.1] gi|239506653|gb|ACR80140.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Kosmotoga olearia TBF 19.5.1] Length = 268 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 7/171 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K+ I Q NP+ + N+ +A E +G+DL+L E+F +GY +D + + Sbjct: 6 KITIGSVQFNPLQKNGGENLERAVNYIELLVEKGVDLVLLPEMFNTGYGTDDETLQLA-T 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + ++TL + I+ G R+ + NS VI+ DK +L Sbjct: 65 ELYEETLETLSAIADYNDVAIIGGMIRKKTDRYFNSTVIVLPYREPVFYDKTHLFR---- 120 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ-GAEFLFS 173 EK F G V+ D+ G+++C +I I + L KQ GA+ L + Sbjct: 121 DEKGVFSPGEKFVTFVYLDVTFGVVMCYEIG-FPEISRILCKQSGAQVLLA 170 >gi|54302590|ref|YP_132583.1| NAD synthetase [Photobacterium profundum SS9] gi|81697171|sp|Q6LIU7|NADE_PHOPR RecName: Full=NH(3)-dependent NAD(+) synthetase gi|46916014|emb|CAG22783.1| putative NAD synthase [Photobacterium profundum SS9] Length = 278 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 45/234 (19%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS C A +AV+ L E+ + + LPY Q E A A Sbjct: 40 IVLGISGGVDSTTCGRLAQLAVNGLNDESNSSTYQFVAVRLPY---GEQHDEHEAQMALS 96 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG---IVAENIQSRIRGNILMA 393 ++ K V IH + F+L L E V N+++R R Sbjct: 97 FIKPSHSVSVNIKDGVDGIH--ASTLFALKGTGLTPEKDAKIDFVKGNVKARARMIAQYE 154 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ ++L T + +E G+ T +GD + PL L K QV +AS + Sbjct: 155 IAGLVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLIASKLGA------- 207 Query: 454 GPLTEVIPPSILEKSPSA---ELRPHQTDQES-LPPYPILDDIIK-RIVENEES 502 P +++K P+A EL P + D+++ L Y +DD ++ + V++E S Sbjct: 208 -------PDVLVQKVPTADLEELAPQKADEDALLVSYDQIDDFLEGKTVDSEVS 254 >gi|149279598|ref|ZP_01885727.1| carbon-nitrogen hydrolase [Pedobacter sp. BAL39] gi|149229634|gb|EDM35024.1| carbon-nitrogen hydrolase [Pedobacter sp. BAL39] Length = 291 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/284 (22%), Positives = 114/284 (40%), Gaps = 38/284 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + K+++ + Q++ + N+ KA E G ++ ELF S Y ED Sbjct: 1 MAKVQVGLVQMS-CTSNKQENLDKAIVKIREIAAMGAQVVCLQELFTSLYFCDEEDYENF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINL 117 K + D L + I+ + EG+ N+ +LDA G + K+++ Sbjct: 60 KLAEAIPGPSTDVLSKVAAELNVVIIASLFEKRAEGLYHNTTAVLDADGAYLGKYRKMHI 119 Query: 118 PNYSEFHEKRTFISG---YSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLF 172 P+ F+EK F G Y VF+ ++G+LIC D W + GA+FL Sbjct: 120 PDDPGFYEKFYFTPGDLGYK----VFKTKFAKIGVLICWDQWY-PEAARLTSLMGADFLV 174 Query: 173 SLNASPYYHNK--------------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 A + + +++ H I G +P++ +N+VG + + F G Sbjct: 175 YPTAIGWATTQDEGTNTEQYNAWQTIQRSHSIANG------VPVVSINRVGHEAGVDFWG 228 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHY---DQQLSQWNYMSD 259 SF + + +Q H E+ + E D + W ++ D Sbjct: 229 GSFVSNPFGSILYQASHSEEELKVVELDLSKSDSYRTHWPFLRD 272 >gi|46396452|sp|Q8FMS2|NADE_COREF RecName: Full=NH(3)-dependent NAD(+) synthetase Length = 277 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 39/276 (14%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT 323 +P E A+ A V L DY++ ++ ++G+SGG DS + A +AV+ + +E+ Sbjct: 15 VPSIEPAAEVEARVQFLVDYLRVSHARGYVLGISGGQDSTIAGRLAQLAVERIRREDGSD 74 Query: 324 -----IMLPYKYTSPQSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEE 373 + LP+ Q+ ED A A ++ D+++ + + +E Sbjct: 75 HQFVGVRLPHGL---QADEDDALVALDFIQPDRSISINIREATDVLS--AATAAALGIDE 129 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 N+++R R A++ +++ T + +E G+ T YGD + PL L Sbjct: 130 LGDFNKGNVKARQRMVAQYAIAGELGLLVVGTDHAAENVTGFFTKYGDGAADVLPLAGLT 189 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDII 493 K R + LG P S K P+A+L + D+ +LP L Sbjct: 190 K---------RQGALLLQHLGA-----PESTWTKVPTADL---EEDRPALPDEEALGVTY 232 Query: 494 KRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 + I ++++ N E + E +EHL ++KR Sbjct: 233 REI----DTYLENSGEVSPEAAARIEHLWKVGQHKR 264 >gi|326388696|ref|ZP_08210289.1| hydrolase [Novosphingobium nitrogenifigens DSM 19370] gi|326206947|gb|EGD57771.1| hydrolase [Novosphingobium nitrogenifigens DSM 19370] Length = 284 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 14/216 (6%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSFIQACSSAIDTLK 74 D A NI E+A G +IL ELF Y ++ F + ++ T++ Sbjct: 17 DPAVNIMAVAELVEQAAGHGARVILPPELFAGFYFCQQEDEARFALAHPLESDPSVATMR 76 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGY 133 G I F +D + N++ ++ G I+ + K ++P+ + EK F G Sbjct: 77 KLARALGVAIPTSFFERDGQHFYNTLAMIGPDGEIMGIYRKSHIPDGPGYEEKYYFRPGN 136 Query: 134 SNDPI--VFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKR- 187 + + VF R+G+ +C D W + + GAE LF ++ + PY + R Sbjct: 137 TGFKVWDVF-GARIGVGVCWDQWY-PECARAMALMGAEVLFYPTAIGSEPYDADLDTSRV 194 Query: 188 -HEIVTGQISHVHLPIIYVNQVGGQDE-LIFDGASF 221 + G + +P+I N++G ++ F G SF Sbjct: 195 WRRAMQGHAASNCMPVIAANRIGVEENGQTFYGNSF 230 >gi|258513075|ref|YP_003189332.1| nitrilase [Acetobacter pasteurianus IFO 3283-01] gi|256634978|dbj|BAI00953.1| nitrilase [Acetobacter pasteurianus IFO 3283-01] gi|256638033|dbj|BAI04001.1| nitrilase [Acetobacter pasteurianus IFO 3283-03] gi|256641087|dbj|BAI07048.1| nitrilase [Acetobacter pasteurianus IFO 3283-07] gi|256644142|dbj|BAI10096.1| nitrilase [Acetobacter pasteurianus IFO 3283-22] gi|256647197|dbj|BAI13144.1| nitrilase [Acetobacter pasteurianus IFO 3283-26] gi|256650250|dbj|BAI16190.1| nitrilase [Acetobacter pasteurianus IFO 3283-32] gi|256653241|dbj|BAI19174.1| nitrilase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656294|dbj|BAI22220.1| nitrilase [Acetobacter pasteurianus IFO 3283-12] Length = 324 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 23/174 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIA-GNIAKARRAREEANRQGMDLILFTELFISGYP------- 52 M + ++ A Q++PV+GD G K +A EA +G+ L +F E F+ YP Sbjct: 1 MSRIVRAAAIQISPVLGDDGLGTARKVCQAIREAAEKGVKLAVFPETFVPYYPYFSFIQP 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 E L + + D + D G +V+G +D + N+ ++ DA G Sbjct: 61 AFRFGGEHLELYERAVIIPGPVTDMVAETARDTGMVVVLGVNERDFGTLYNTQIVFDATG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 I+ R KI P Y HE+ + G + V R+G L C W++ N Sbjct: 121 EILLKRRKIT-PTY---HERMIWGQGDESGLKVVESAAGRIGALAC---WEHYN 167 >gi|119386511|ref|YP_917566.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paracoccus denitrificans PD1222] gi|119377106|gb|ABL71870.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paracoccus denitrificans PD1222] Length = 286 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 33/168 (19%) Query: 32 EANRQGMDLILFTELFISGY------------PPEDLVFKKSFIQACSSA----IDTLKS 75 EA R G LILF EL +GY PP D + + +AC++ I +L Sbjct: 30 EAGR-GAQLILFPELANTGYVEPLVPGGAMTLPPAD--YAGALHRACAAPDGPEIASLAE 86 Query: 76 DTHDGGAGIVVGFPRQD--QEGVLNSVVILDAGNIIAVRDKINLPNYSEFH----EKRTF 129 G +V+G +D +EGV+ + +L + + L Y++ H EK F Sbjct: 87 AAQRHGTHVVIGMGLRDPLREGVMRNCSLL-------IGPQGVLGCYAKIHQWQNEKLYF 139 Query: 130 ISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 G D F + RLG+ IC DI + I + + QGA + S+ AS Sbjct: 140 TRGDRIDSFAFGETRLGMQICYDI-RFPEITRIMAMQGAGIVTSVWAS 186 >gi|225021554|ref|ZP_03710746.1| hypothetical protein CORMATOL_01575 [Corynebacterium matruchotii ATCC 33806] gi|305681330|ref|ZP_07404137.1| NAD+ synthase [Corynebacterium matruchotii ATCC 14266] gi|224945545|gb|EEG26754.1| hypothetical protein CORMATOL_01575 [Corynebacterium matruchotii ATCC 33806] gi|305659535|gb|EFM49035.1| NAD+ synthase [Corynebacterium matruchotii ATCC 14266] Length = 281 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 114/275 (41%), Gaps = 40/275 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA------VDALGKE-N 320 P + E + V L DY+ ++ ++G+SGG DS L +A + A+G + Sbjct: 19 PRVDAEEEITHRVQFLTDYLLYSHARGFVLGISGGQDSTLAGKLAQLAVEKLRAVGTDAE 78 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFL-QEEPSGIV 378 + LPY + ED K + + V + I + + +++ L QE+ + Sbjct: 79 FWAMRLPYGVQFDE--EDCEIALKFIQPDHTVTVNIKETTDAQARAVAEALGQEKLTDFN 136 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 NI++R R AL+ K +++ T + +E G+ T +GD + PL L K Q Sbjct: 137 KGNIKARERMIAQYALAGEKKLLVIGTDHAAENVTGFFTKFGDGAADLVPLFGLSKRQGA 196 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 QL LG P S K P+A+L RP D+++L Y +D Sbjct: 197 QL---------LRHLGA-----PESTWRKVPTADLEEDRPALADEDALGVTYADID---- 238 Query: 495 RIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 +++ N E +EHL +KR Sbjct: 239 -------TYVENTGLIPAEAQARIEHLWQIGHHKR 266 >gi|212635073|ref|YP_002311598.1| NAD synthetase [Shewanella piezotolerans WP3] gi|226724352|sp|B8CNP2|NADE_SHEPW RecName: Full=NH(3)-dependent NAD(+) synthetase gi|212556557|gb|ACJ29011.1| NAD+ synthase [Shewanella piezotolerans WP3] Length = 276 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 44/270 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 ++ ++++N +++G+SGG+DS+L + A+ + N T + LPY Sbjct: 28 IKTKLKQSNTQSLVLGISGGVDSSLAGRLCQLAVDEINADTDGSGYQFIAVRLPYDI--- 84 Query: 334 QSLEDAA--ACAKALGCKYDVLPIHDLVNHFFS------LMSQFLQEEPSGI--VAENIQ 383 Q ED A AC K + + D VN S M+ + + + I V N++ Sbjct: 85 QKDEDEAQLACQFIKPSKQVTVNVKDGVNGIHSETLSAIEMAGIVLPDNTNIDFVKGNVK 144 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R+R ++ +++ T + +E G+ T +GD + PL L K QV LA + Sbjct: 145 ARMRMVAQYEIAGLVAGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRTLAHF 204 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 + P ++ K+P+A+L Q E + D I +E +E Sbjct: 205 LGA--------------PDILVNKAPTADLEEGQPQLEDEIALGLTYDQIDDFLEGKEV- 249 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 + ND V + +++KR P Sbjct: 250 ---SEAVNDRLV----SIYRATQHKRDAIP 272 >gi|13508301|ref|NP_110251.1| NH(3)-dependent NAD(+) synthetase [Mycoplasma pneumoniae M129] gi|2498611|sp|P75216|NADE_MYCPN RecName: Full=Probable NH(3)-dependent NAD(+) synthetase gi|1673951|gb|AAB95928.1| probable NH(3)-dependent NAD(+) synthetase [Mycoplasma pneumoniae M129] Length = 248 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 16/123 (13%) Query: 363 FSLMSQFLQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + M Q L +P +VA N+++R+R L + ++L T N E S+GY T +G Sbjct: 90 YRAMLQALTIDPQKELMVAGNLKARLRMACLYTHAQKHNYLVLGTGNFIEYSLGYFTKWG 149 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D + PL L K+ V+ L+ N +P ++E++P+A L QTD+ Sbjct: 150 DGACDVAPLAFLLKSDVYALSQHFN--------------VPELVIERAPTASLFAGQTDE 195 Query: 481 ESL 483 + Sbjct: 196 AEM 198 >gi|88856799|ref|ZP_01131453.1| NAD(+) synthetase [marine actinobacterium PHSC20C1] gi|88813967|gb|EAR23835.1| NAD(+) synthetase [marine actinobacterium PHSC20C1] Length = 274 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 31/241 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKEN--VQTIMLPYKYTSPQSLE 337 L++Y++ ++ +++G+SGG DS+L +AV L E VQ + + + + Sbjct: 31 LKEYLKTSHAKGLVLGISGGQDSSLAGRLCQLAVAELRAEGTEVQFVAVRLPHGVQHDED 90 Query: 338 DAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DA + +V I V+ + + L E + N+++R R A++ Sbjct: 91 DAQLALDFIEADREVTFNIQRAVDGIAAEFADALGEPITDFNKGNVKARERMVAQYAIAG 150 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++ T + +E G+ T +GD PL L K Q QL N+ Sbjct: 151 QLGYLVVGTDHAAEAVTGFFTKFGDGGADVLPLSALTKRQGKQLLKHLNA---------- 200 Query: 457 TEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKR-------IVENEESFIN 505 P + EK P+A+L P Q D+++L Y +DD ++ VE E ++N Sbjct: 201 ----PERLYEKVPTADLLDHTPGQADEDNLGVTYEHIDDYLEGRDVPAEVAVEIETKYLN 256 Query: 506 N 506 + Sbjct: 257 S 257 >gi|209963992|ref|YP_002296907.1| hydrolase, carbon-nitrogen family [Rhodospirillum centenum SW] gi|209957458|gb|ACI98094.1| hydrolase, carbon-nitrogen family [Rhodospirillum centenum SW] Length = 292 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 15/218 (6%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---VFKKSFIQACSSAIDTLK 74 D A N+AKA A+ G +IL ELF + Y +D +F + + ++ + Sbjct: 16 DRAANVAKAEEMVRRAHAAGARIILLQELFETPYFCKDQKAELFDLAAPAEGNPVLERMS 75 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGY 133 + + V F + NS+ ++DA G ++ + K ++P+ + EK F G Sbjct: 76 RLARELEVVLPVSFFERANTAHYNSLAMIDADGTVLGIYRKSHIPDGPGYQEKYYFNPGD 135 Query: 134 SNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAE---FLFSLNASPYYHNKLKKRH- 188 + + R R+G IC D W + + + QGAE + ++ + P + + H Sbjct: 136 TGFRVFQTRYARVGAAICWDQWFPES-ARVMALQGAEVFCYPTAIGSEPQDASLDSRDHW 194 Query: 189 -EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASF 221 ++ G +P+I N++G +D + F G+SF Sbjct: 195 QRVMQGHAGANLIPLIASNRIGREDGESCGITFYGSSF 232 >gi|156740876|ref|YP_001431005.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Roseiflexus castenholzii DSM 13941] gi|156232204|gb|ABU56987.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Roseiflexus castenholzii DSM 13941] Length = 250 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 35/253 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFKKSFI 63 +++ AQ+ PV+GDIA N A+ + A DL+ F EL ++GY PP S Sbjct: 1 MRLCAAQIRPVMGDIARNAARHFEIVDLAVACHADLVFFPELSLTGYAPPLATSLASSAA 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVV--GFPRQDQEGVLNSVV--ILDAGNIIAVRDKINLPN 119 C +A+ +SD H+ IV+ G P GV +V + DA + + ++++ Sbjct: 61 DPCLNALQQ-RSDAHN----IVIGAGLPIAADSGVQIGMVWFVPDAPRRVYAKQQLHV-- 113 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP- 178 E F+ G + RL +C + + N + GAE + A P Sbjct: 114 ----DEMSCFVPGSEQIILEVAGWRLAPALCYESLQ-MNHADGAARLGAEVYLASVAKPA 168 Query: 179 -------YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 ++ + +RH + +I N G D+ + G S ++ + + Sbjct: 169 GNLAKAMLHYPAVARRHAMY----------VIMANCTGPCDDFVSVGQSAVWNSRGERLA 218 Query: 232 QMKHFSEQNFMTE 244 M SE M + Sbjct: 219 HMGSDSEGVVMLD 231 >gi|38234443|ref|NP_940210.1| NAD synthetase [Corynebacterium diphtheriae NCTC 13129] gi|38200706|emb|CAE50402.1| NH3-dependent NAD+ synthetase [Corynebacterium diphtheriae] Length = 272 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 44/262 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ-------TIMLPYKYTSPQS 335 L Y++ + +G+SGG DS L +A A+ + V I LPY Q+ Sbjct: 28 LTRYIKHSGTKGFALGISGGQDSTLAGRLAQLAVEQLRVAGYPAEFWAIRLPYGV---QA 84 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM--- 392 ED A A + P H +V + + + +++ +GNI Sbjct: 85 DEDDAHIALEF-----IQPDHSVVINIKEATDAAARATAQALGLQDVGDFNKGNIKARQR 139 Query: 393 -----ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 AL+ K +++ T + +E G+ T +GD PL L K R Sbjct: 140 MIAQYALAGEKKLLVIGTDHAAENVTGFFTKFGDGGADILPLAGLSK---------RQGA 190 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND 507 + LG P S EK P+A+L + D+ +LP L + I +++I + Sbjct: 191 ALLEHLG-----APASTWEKVPTADL---EEDRPALPDEEALGVTYREI----DAYIEGN 238 Query: 508 QEYNDETVRYVEHLLYGSEYKR 529 +E + E + +E L ++KR Sbjct: 239 EEVSPEAQQRIERLWKIGQHKR 260 >gi|36955865|gb|AAQ87002.1| NH(3)-dependent NAD(+) synthetase [Polaribacter filamentus] Length = 264 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 9/167 (5%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L++Y + +IG+SGGIDSA LCA L V+ + + ++ E Sbjct: 16 LKEYATNAKVNGFVIGVSGGIDSAVTSILCAKTGYPTLC---VEMPIHQAEIQVSRAEEH 72 Query: 339 AAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 A K + + + F +++ E + N ++R+R L + Sbjct: 73 IAQLKKRFANVSEARVDLTSTFEDFKNVLPSVEHSEKLDLSLANTRARLRMTTLYYFAAL 132 Query: 398 SKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 ++ T NK E VG+ T YGD +P+ DL K++V++LA++ Sbjct: 133 QGLLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVYELAAY 179 >gi|223937615|ref|ZP_03629518.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [bacterium Ellin514] gi|223893778|gb|EEF60236.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [bacterium Ellin514] Length = 298 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 25/221 (11%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKSDTHD 79 N+ K E+A +QG +I ELF S Y ED + K + + Sbjct: 26 NLKKTLAFTEKAAKQGAQIICTQELFRSQYFCQSEDHEYFKLAEPIPGPSTQAFQKIAKK 85 Query: 80 GGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSND 136 G IV + GV N+ I+DA G+++ + K+++P+ F+EK F G Sbjct: 86 HGVVIVASLFERRASGVYHNTAAIIDADGSLLGIYRKMHIPDDPLFYEKFYFTPGDLGFK 145 Query: 137 PIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH-------- 188 + ++G+LIC D W + QGAE LF A +H K K + Sbjct: 146 AWQTKFGKIGVLICWDQWYPEG-ARLTAMQGAEILFYPTAIG-WHPKEKTEYGTNQHGAW 203 Query: 189 EIVTGQISHVHLPIIYV---NQVG-----GQDELIFDGASF 221 E++ Q SH YV N++G G D L F G SF Sbjct: 204 ELI--QRSHAVANGCYVAVANRIGLEQPIGGDGLEFWGQSF 242 >gi|206578803|ref|YP_002239040.1| NAD+ synthetase [Klebsiella pneumoniae 342] gi|288935944|ref|YP_003440003.1| NAD+ synthetase [Klebsiella variicola At-22] gi|290512908|ref|ZP_06552272.1| NAD+ synthetase [Klebsiella sp. 1_1_55] gi|206567861|gb|ACI09637.1| NAD+ synthetase [Klebsiella pneumoniae 342] gi|288890653|gb|ADC58971.1| NAD+ synthetase [Klebsiella variicola At-22] gi|289774521|gb|EFD82525.1| NAD+ synthetase [Klebsiella sp. 1_1_55] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A+ + +T + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLTGKLCQMAINELRAETGDSSLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN S+++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKASVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ +K +++ T + +E G+ T YGD NP+ L K Q QL + Sbjct: 142 RMKAQYSIAGMTKGVVVGTDHAAEAITGFFTKYGDGGTDINPIFRLNKRQGKQLLAH--- 198 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 LG P + +K P+A+L + D+ SLP D++ + EN + ++ Sbjct: 199 ------LG-----CPEHLYKKLPTADL---EDDRPSLP-----DEVALGVTYENIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + + + +E +E+KRR Sbjct: 240 G-KTLDPSIAKTIEGWYLKTEHKRR 263 >gi|227504021|ref|ZP_03934070.1| NAD-synthetase [Corynebacterium striatum ATCC 6940] gi|227199415|gb|EEI79463.1| NAD-synthetase [Corynebacterium striatum ATCC 6940] Length = 281 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 42/247 (17%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-ENVQ--TI 324 PL + E + + V L DY++K ++G+SGG DS L +A A+ + E Q + Sbjct: 23 PLIDPEQEVESRVEFLADYLRKTGAKGFVLGISGGQDSTLAGRLAQLAVARVEETQFWAV 82 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE---- 380 LP+ Q+ ED A A + P H L + + + + Sbjct: 83 RLPHGV---QADEDDAQIALDF-----IQPDHRLTVNIAPATKELDDAVATALGNSDNGE 134 Query: 381 ---------NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 N+++R+R A++ A++L + + +E + T +GD + PL+ Sbjct: 135 FNLGDFNRGNVKARVRMTAQYAIAGEVGALVLGSDHAAENITAFFTKWGDGAADLLPLEG 194 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K R + LG P S +K P+A+L RP D+E+L Y Sbjct: 195 LNK---------RQGALLLQHLG-----APESTWKKIPTADLEEDRPQLADEEALGVSYT 240 Query: 488 ILDDIIK 494 +DD ++ Sbjct: 241 HIDDYLE 247 >gi|301059872|ref|ZP_07200763.1| hydrolase, carbon-nitrogen family [delta proteobacterium NaphS2] gi|300446022|gb|EFK09896.1| hydrolase, carbon-nitrogen family [delta proteobacterium NaphS2] Length = 269 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 9/180 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M LK+A+ ++ +GDI GN+ + + E A R+G ++ F E +GY +D K Sbjct: 1 MTTDLKLAVVCMHSTLGDIEGNLDRISQLAERAVREGAHMVCFPESVATGYALKD-PGKY 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGF--PRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 ++ +D L D ++ GF R Q+ + +V G + R P Sbjct: 60 CSVRDSVQVMDRLIQVGRDLKTVLIAGFIENRGGQKQYIAQLVTGPEGPMGIYRKTHLSP 119 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 SE + +G + V+ R G+ +C + I + GA+FL +ASP Sbjct: 120 TESE-----AYGAGKTLGVFVYGHWRFGVQLCYEA-HFPEISTKMALSGADFLLIPHASP 173 >gi|302913419|ref|XP_003050920.1| hypothetical protein NECHADRAFT_80653 [Nectria haematococca mpVI 77-13-4] gi|256731858|gb|EEU45207.1| hypothetical protein NECHADRAFT_80653 [Nectria haematococca mpVI 77-13-4] Length = 339 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 30/180 (16%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PE 54 M +++A+ Q PV D+A ++ KA EA + G L+ F+E ++ GYP P Sbjct: 1 MACPIRVAVTQAEPVYLDLAASVKKACGLIAEAAQNGAKLVAFSECWLPGYPAWIWARPV 60 Query: 55 DLVFKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNI 108 D + +I S A++ +K+ + + +GF Q ++ +I G + Sbjct: 61 DFELQTRYIYNSLPIESEAMELVKATAKEHSIAVALGFSEQSPSHSIYISQAIISPQGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFI---SGYSNDPIVFRD-------IRLGILICEDIWKNSN 158 + R KI H +RT SG + +V D I++G C W+++ Sbjct: 121 VMHRRKIK-----PTHMERTLFGDGSGADLNNVVEVDFGAEHGKIKVGCFAC---WEHTQ 172 >gi|229495955|ref|ZP_04389679.1| hydrolase, carbon-nitrogen family [Porphyromonas endodontalis ATCC 35406] gi|229317047|gb|EEN82956.1| hydrolase, carbon-nitrogen family [Porphyromonas endodontalis ATCC 35406] Length = 295 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 115/276 (41%), Gaps = 27/276 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 + LKI I Q D A N + + EE ++ G LI+ EL Y E VF Sbjct: 1 MNTLKIGIIQ-QANTADRAANKQRLAQKIEELSKNGAQLIVLQELHNGLYFCQTEEVSVF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKIN 116 ++ + + + G +V+ + G+ + +VVI G+I K++ Sbjct: 60 DQA-ESIPGESTEYFGAVARQYGVVLVLSLFERRMAGLYHNTAVVIEKDGSIAGKYRKMH 118 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL---- 171 +P+ ++EK F G PI RLG+L+C D W + + +GA+ L Sbjct: 119 IPDDPAYYEKYYFTPGDLGFTPIDTSVGRLGVLVCWDQWY-PEAARAMALRGADLLIYPT 177 Query: 172 -FSLNASPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGAS 220 +S + ++R T Q H +LP++ VN+VG + + + F G S Sbjct: 178 AIGTESSDTPEEQERQREAWCTVQRGHAIANNLPVVSVNRVGHEADPSGRTGGISFWGYS 237 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYD--QQLSQW 254 F Q ++ Q+ E + E D +Q+ +W Sbjct: 238 FVAGQQGEILAQLGR-EEATALVEVDLDRTEQVRRW 272 >gi|332304712|ref|YP_004432563.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172041|gb|AEE21295.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 302 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 18/164 (10%) Query: 98 NSVVILDAG-NIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D ++ K+++P+ F+EK F G +PI +LG+L+C D W Sbjct: 107 NTAVVFDRQLGMVGKYRKMHIPDDPGFYEKFYFTPGDMGFEPIQTSVGKLGVLVCWDQW- 165 Query: 156 NSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GA+ LF ++ P ++R I H +P+I N+ Sbjct: 166 YPEAARLMAMRGADMLFYPTAIGWDPADTEDEQQRQFGAWQTIQRSHAVANSVPVIVANR 225 Query: 208 VG-------GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 G G + + F G SF Q ++ Q SEQN M E Sbjct: 226 TGFEASPVEGDNGIQFWGQSFIAGPQGEILAQADADSEQNLMVE 269 >gi|160884603|ref|ZP_02065606.1| hypothetical protein BACOVA_02592 [Bacteroides ovatus ATCC 8483] gi|156110342|gb|EDO12087.1| hypothetical protein BACOVA_02592 [Bacteroides ovatus ATCC 8483] Length = 294 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+ I Q + DI N+ ++ E G LI+ EL S Y Sbjct: 1 MRKIKVGIIQQSNT-ADIKANLMNLAKSIEACAAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTNLFDLAEPIPGPSTGFYSELAAANKVVLVTSLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ- 211 GAE L A + + K ++ + + Q +H LP+I VN+VG GQ Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSGQT 228 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + ++F G SF Q + Q + +N + E Sbjct: 229 NGILFWGNSFVAGPQGEFLTQAGNDHPENIVVE 261 >gi|194468065|ref|ZP_03074051.1| NAD+ synthetase [Lactobacillus reuteri 100-23] gi|194452918|gb|EDX41816.1| NAD+ synthetase [Lactobacillus reuteri 100-23] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 33/214 (15%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ------TIMLPYKYTSPQS 335 D++Q +++G+SGG DS+L + +AV+ L +E + LPY + +S Sbjct: 33 DFLQTTKMKTLVLGISGGQDSSLAGRLSQLAVEKLREETGDNEYQFIAVRLPYGEQADES 92 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---AENIQSRIRGNILM 392 DA ++ ++ + M L E + I NI++R R + Sbjct: 93 --DAMFAINDFIKPDKIMRVN--IKAATDAMVASLNEAGTPISDFNKGNIKARERMIVQY 148 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A+ +K ++ T + +E G+ T +GD PL L K R + Sbjct: 149 AIGGENKGAVVGTDHAAEAVTGFYTKFGDGGADITPLSGLDK---------RQGKALLQF 199 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 LG P + +K+P+A+L +P + D+E+L Sbjct: 200 LG-----APAKLYDKTPTADLEEDKPMRPDEEAL 228 >gi|259503808|ref|ZP_05746710.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus antri DSM 16041] gi|259168187|gb|EEW52682.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus antri DSM 16041] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 45/233 (19%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQ----- 322 +EE D +S D++QK +++G+SGG DS+L +AV+ L ++ Sbjct: 21 QEEVDKRVQFIS--DFLQKTGMTTLVLGISGGQDSSLTGRLCQLAVEKLRQKAPDKHYQF 78 Query: 323 -TIMLPYKYTSPQSLEDAAACAKALG--------CKYDVLPIHDLVNHFFSLMSQFLQEE 373 + LPY + D + KA+ + ++ P D + + + Sbjct: 79 IAVRLPYGEQA-----DESDAMKAINDFIKPDQTLRVNIKPATDAMVAAVEAAGAQISDF 133 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 G NI++R R + A++ + ++ T + +E G+ T +GD PL L Sbjct: 134 NKG----NIKARERMIVQYAIAGANHGAVVGTDHAAEAVTGFYTKFGDGGADITPLSGLD 189 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 K Q L + + P S+ EK P+A+L +P + D+E+L Sbjct: 190 KRQGKALLEYLQA--------------PKSLYEKVPTADLEDDQPMRPDEEAL 228 >gi|261414829|ref|YP_003248512.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371285|gb|ACX74030.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327331|gb|ADL26532.1| hydrolase, carbon-nitrogen family [Fibrobacter succinogenes subsp. succinogenes S85] Length = 265 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 19/176 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-VFKKSFI 63 LK+ + Q + G+ N+A+A++ +A L+L E+F +GY P DL + F Sbjct: 2 LKVYLVQFDSAKGNKTENLARAKKMILDAKPNAGSLVLLPEMFATGYVPADLDKAAEDFS 61 Query: 64 QACSSAIDTLKSDTHDG------GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR--DKI 115 C+ S+ D GAGI + G N V I R +K+ Sbjct: 62 SNCTGETARTLSEIADETNCTIMGAGIT-----RASTGFYNHVSIYKPNEAQEFRGYNKM 116 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 NL F EK +F +G + F + + IC D+ + I + + K+GA + Sbjct: 117 NL----FFPEKESFKAGSEINLFKFNNWSIASFICYDL-RFPEIFREVTKKGANLI 167 >gi|28900267|ref|NP_799922.1| NAD synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|260362589|ref|ZP_05775506.1| NAD+ synthetase [Vibrio parahaemolyticus K5030] gi|260880835|ref|ZP_05893190.1| NAD+ synthetase [Vibrio parahaemolyticus AN-5034] gi|260897144|ref|ZP_05905640.1| NAD+ synthetase [Vibrio parahaemolyticus Peru-466] gi|38502967|sp|Q87J41|NADE_VIBPA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|28808578|dbj|BAC61755.1| NH(3)-dependent NAD(+) synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|308088027|gb|EFO37722.1| NAD+ synthetase [Vibrio parahaemolyticus Peru-466] gi|308091589|gb|EFO41284.1| NAD+ synthetase [Vibrio parahaemolyticus AN-5034] gi|308113377|gb|EFO50917.1| NAD+ synthetase [Vibrio parahaemolyticus K5030] Length = 276 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 44/237 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSAL---CAAIAVDALGKENVQ------TIMLPYKYTSP 333 ++ +Q+ +++G+SGG+DS A +AVD L +E + LPY Sbjct: 28 IKRKLQEAGCKSLVLGISGGVDSTTLGRLAQLAVDQLNEETGSNDYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACAK---------ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG---IVAEN 381 Q ED A A ++ K V +H N +L L E + V N Sbjct: 85 QKDEDEAQLALSFIKPTHSISVNIKQGVDGMHAASN--IALEGTGLMPEDAAKVDFVKGN 142 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++R R ++ + ++L T + +E G+ T +GD + PL L K QV ++A Sbjct: 143 VKARARMIAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVREVA 202 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 203 ATLGA--------------PEVLVKKVPTADLEELAPQKADEDALNLTYEQIDDFLE 245 >gi|153951401|ref|YP_001397825.1| carbon-nitrogen hydrolase [Campylobacter jejuni subsp. doylei 269.97] gi|152938847|gb|ABS43588.1| carbon-nitrogen hydrolase [Campylobacter jejuni subsp. doylei 269.97] Length = 279 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 16/178 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KLK A+ Q P+ + N+ K+ + A QG L++ ELF SGY ED K Sbjct: 1 MRRKLKAALIQFAPLSYEREQNLNKSLIFTQTALEQGAKLVVLPELFDSGYCVED----K 56 Query: 61 SFIQACSSAID---TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F A S + +LK A I+ ++ + + ++ I+ ++ KI L Sbjct: 57 DFSYALSLEKELPSSLKELAKKYEAYIIACSIEKEDDTLYDTAFIVGKEGLVGKYRKIYL 116 Query: 118 PNYSEFHEKRTFISG--YSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFL 171 EK+ F G Y +VF+D ++LG+ IC +I + L QGAE + Sbjct: 117 FR----DEKKRFARGQDYPVFELVFKDFSLKLGLQICYEIGFGEG-ARFLALQGAELI 169 >gi|307725628|ref|YP_003908841.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. CCGE1003] gi|307586153|gb|ADN59550.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. CCGE1003] Length = 319 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 7/156 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L++L IA Q+ P +G N+A+ R E A QG L++ EL +GY D S Sbjct: 34 LEELVIACVQMEPHIGAKRANVARLIRHVETAASQGASLVVLPELATTGYVFADRDEAFS 93 Query: 62 FIQACSSA-IDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + L +DT G IV G + + + NS + I + K++L N Sbjct: 94 LAEGLPDGETAGLFADTAQRLGIHIVTGIAERAGKRLYNSALFTGPSGHIGIYRKLHLWN 153 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIW 154 +E R F G P+ + R+ I IC D W Sbjct: 154 ----NENRFFEPGDRGVPVFGTPLGRIAIAICYDGW 185 >gi|260175003|ref|ZP_05761415.1| beta-ureidopropionase [Bacteroides sp. D2] gi|299145642|ref|ZP_07038710.1| glycosyl hydrolase, family 10 [Bacteroides sp. 3_1_23] gi|315923236|ref|ZP_07919476.1| beta-ureidopropionase [Bacteroides sp. D2] gi|298516133|gb|EFI40014.1| glycosyl hydrolase, family 10 [Bacteroides sp. 3_1_23] gi|313697111|gb|EFS33946.1| beta-ureidopropionase [Bacteroides sp. D2] Length = 294 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 120/293 (40%), Gaps = 49/293 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+ I Q + DI N+ ++ E G LI+ EL S Y Sbjct: 1 MRKIKVGIIQQSNT-ADIKANLMNLAKSIEACAAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTNLFDLAEPIPGPSTGFYSELAAANKVVLVTSLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ- 211 GAE L A + + K ++ + + Q +H LP+I VN+VG GQ Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSGQT 228 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 + ++F G SF Q + Q + +N + E D + S+ W ++ D Sbjct: 229 NGILFWGNSFVAGPQGEFLAQAGNDHPENIVVE--IDMERSENVRRWWPFLRD 279 >gi|300214894|gb|ADJ79310.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus salivarius CECT 5713] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 36/268 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTI 324 E + V L+DY++K+ F K +++G+SGG DS L ++ A+ G + Q I Sbjct: 21 EEEIRRSVDFLKDYLKKHPFLKALVLGISGGQDSTLAGKLSQMAISELREETGDDAYQFI 80 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAEN 381 + Y +DA + + V + M Q ++E E S N Sbjct: 81 AVRLPYGDQADEQDAMDAIEFMQADKTV---RVNIKQAADAMVQSIEENGLEISDFNKGN 137 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 I++R R ++ ++ T + +E G+ T YGD PL L K Q + Sbjct: 138 IKARERMIAQYGIAGAVSGAVVGTDHAAEAITGFYTKYGDGGADITPLWRLDKRQGRAML 197 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 N+ P + +K P+A+L + D+ +LP D++ + N+ Sbjct: 198 ELLNA--------------PEHLYKKVPTADL---EEDRPALP-----DEVALGVTYNDI 235 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E D+ +E+ +E+KR Sbjct: 236 DDYLEGKEVADDVAEKIENWFLKTEHKR 263 >gi|259910241|ref|YP_002650597.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Erwinia pyrifoliae Ep1/96] gi|224965863|emb|CAX57396.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Erwinia pyrifoliae Ep1/96] gi|283480356|emb|CAY76272.1| hydrolase, carbon-nitrogen family [Erwinia pyrifoliae DSM 12163] Length = 286 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 7/152 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF--KKS 61 KLK+A+AQ PV GDI N+ ++ A G ++L E F+SGY P + + Sbjct: 12 KLKVAVAQAEPVAGDIPANVQQSVTLIARAAELGAKVVLLPEKFLSGYEPSLIKADPARY 71 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPNY 120 I A + + V+G Q++ GV + S+ G + A K L + Sbjct: 72 AISANDERLKPIAMACRQAAIFAVIGAATQEETGVCITSLCFNPQGELFARYHKRALFS- 130 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 E F G I LG+ IC D Sbjct: 131 ---SEAEFFQPGQQAVAIEVEGWSLGMAICYD 159 >gi|58260632|ref|XP_567726.1| NAD+ synthase (glutamine-hydrolyzing) [Cryptococcus neoformans var. neoformans JEC21] gi|57229807|gb|AAW46209.1| NAD+ synthase (glutamine-hydrolyzing), putative [Cryptococcus neoformans var. neoformans JEC21] Length = 652 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 101/481 (20%), Positives = 169/481 (35%), Gaps = 123/481 (25%) Query: 83 GIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF----------- 129 GIV +G P + + N VI+ G I+ +R K+ + N + E R F Sbjct: 19 GIVCDIGMPLEHKNNNYNCRVIIFNGKILLIRPKMWMANDGNYRELRHFTPWHKHRQVEK 78 Query: 130 ---------ISGYSNDP-----IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 ++G + P I D +G+ +CE+++ ++ + G E + + Sbjct: 79 HSLPHMIRIVTGQTYVPFGDAVIATEDTVIGVELCEELFTPASPHILMGLDGVEIFTNSS 138 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCFDGQQQLAFQMK 234 S + KL +R E++ + +Y NQ G D L +DGA Q LA Q Sbjct: 139 GSHHELRKLNRRVELIKEATMKLGGIYLYANQQGCDGDRLYYDGACLIAMNGQILA-QGP 197 Query: 235 HFS----------------------------------EQNFMTEWHYD--QQLSQWNYMS 258 FS + + + D +Q+ + Sbjct: 198 QFSLSEVEVVSATVDLRAVRAHRTTSSRRMQSAQAEAYERVVADTRLDGGEQIKVGLRET 257 Query: 259 DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI------- 311 S Y +EE A AC L DY++++ + LSGGIDS A I Sbjct: 258 KGSMDVRYHTPEEEIALGPACWLW--DYLRRSRTQGYFLPLSGGIDSCATAIIVHSMCRL 315 Query: 312 AVDALGKENVQTIMLPYKYT-------------------------------SPQSLEDAA 340 V+A K + Q I + T S ++ E A Sbjct: 316 VVEAAAKGDEQVITDARRITNEPEDSTYIPEDPREFAGRIFHTCYMGTENSSSETRERAK 375 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP----------SGIVAENIQSRIR--- 387 A A+G + L + V+ + S + P + +NIQ+R+R Sbjct: 376 NLADAIGAYHVDLNMDTAVSAVKGIFSFVTGKTPQFKAHGGTNAENLALQNIQARLRMVV 435 Query: 388 ----GNILMALSNHSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 +L + + +L L ++N E GY T Y S NP+ + K + + + Sbjct: 436 SYMFAQLLPWVRGKNGGLLVLGSANVDESLRGYFTKYDCSSADVNPIGGISKVDLKRFIA 495 Query: 443 W 443 W Sbjct: 496 W 496 >gi|290968926|ref|ZP_06560462.1| hydrolase, carbon-nitrogen family [Megasphaera genomosp. type_1 str. 28L] gi|290781049|gb|EFD93641.1| hydrolase, carbon-nitrogen family [Megasphaera genomosp. type_1 str. 28L] Length = 281 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 23/231 (9%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKK 60 K +KIA Q +G +A N A A R +A + G D+++ EL+ + + P D+ + K Sbjct: 19 KMMKIAAVQWEIQLGQVAKNYAAADRWVAKAAQDGADIVVLPELWNTAFFPADVAALADK 78 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILD-AGNIIAVRDKINLP 118 IQ L+ G IV G +E L N++ ++D G I DK++L Sbjct: 79 EGIQ----TRKFLQQAARQYGVYIVGGSVATVRERRLYNTLYVVDRQGQWITQYDKVHL- 133 Query: 119 NYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 ++ E R F +G P V+ R G +IC D+ + + L G E LF A Sbjct: 134 -FTRGREDRIFSAG--RRPCVWDLDGFRAGAVICYDL-RFDEWLRTLTLSGCEILFVPAA 189 Query: 177 SPY---YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P H L R V Q ++ VN G ++ G S D Sbjct: 190 WPAARGVHWDLLTRACAVMQQCV-----VVAVNGCGQSGDISLYGHSAIID 235 >gi|330990598|ref|ZP_08314555.1| Aliphatic nitrilase [Gluconacetobacter sp. SXCC-1] gi|329762300|gb|EGG78787.1| Aliphatic nitrilase [Gluconacetobacter sp. SXCC-1] Length = 324 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 23/174 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIA-GNIAKARRAREEANRQGMDLILFTELFISGYP------- 52 M + ++ A Q++PV+GD G K +A EA +G+ L +F E F+ YP Sbjct: 1 MSRIVRAAAIQISPVLGDDGLGTARKVCQAIREAAEKGVKLAVFPETFVPYYPYFSFIQP 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 E L + + D + G +V+G +D + N+ +I DA G Sbjct: 61 AFRFGGEHLALYERAVVIPGPVTDMVAEAARQTGMVVVLGVNERDFGTLYNTQIIFDATG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 I+ R KI P Y HE+ + G + V R+G L C W++ N Sbjct: 121 EILLKRRKIT-PTY---HERMVWGQGDGSGLKVVESAAGRIGALAC---WEHYN 167 >gi|262403380|ref|ZP_06079940.1| NAD synthetase [Vibrio sp. RC586] gi|262350879|gb|EEZ00013.1| NAD synthetase [Vibrio sp. RC586] Length = 276 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 36/221 (16%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQ---------TIMLPYKYTSPQSLEDAA----- 340 +++G+SGG+DS C +A A+ + N Q + LPY ++ A Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTSEYQFIAVRLPYGEQKDEAEAQLALSFIR 99 Query: 341 -ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMALSNH 397 + + ++ K V +H H + + + +P+ I + N+++R R ++ + Sbjct: 100 PSHSVSVNIKAGVDGLHTASQHALA-NTGLIPTDPAKIDFIKGNVKARARMVAQYEIAGY 158 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 159 VGGLVLGTDHSAENITGFYTKFGDGACDLAPLYGLNKRQVRLLAETLGA----------- 207 Query: 458 EVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 208 ---PAQLVHKTPTADLEELAPLKADEAALNLTYEQIDDFLE 245 >gi|301299865|ref|ZP_07206099.1| NAD+ synthase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852536|gb|EFK80186.1| NAD+ synthase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 36/268 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTI 324 E + V L+DY++K+ F K +++G+SGG DS L ++ A+ G + Q I Sbjct: 21 EEEIRRSVDFLKDYLKKHPFLKALVLGISGGQDSTLAGKLSQMAISELREETGDDAYQFI 80 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAEN 381 + Y +DA + + V + M Q ++E E S N Sbjct: 81 AVRLPYGDQADEQDAMDAIEFMQADKTV---RVNIKQAADAMVQSIEENGLEISDFNKGN 137 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 I++R R ++ ++ T + +E G+ T YGD PL L K Q + Sbjct: 138 IKARERMIAQYGIAGAVSGAVVGTDHAAEAITGFYTKYGDGGADITPLWRLDKRQGRAML 197 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 N+ P + +K P+A+L + D+ +LP D++ + N+ Sbjct: 198 ELLNA--------------PEHLYKKVPTADL---EEDRPALP-----DEVALGVTYNDI 235 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E D + +E+ +E+KR Sbjct: 236 DDYLEGKEVADNVAKKIENWFLKTEHKR 263 >gi|227545201|ref|ZP_03975250.1| NAD synthetase [Lactobacillus reuteri CF48-3A] gi|300909121|ref|ZP_07126582.1| NAD(+) synthase [Lactobacillus reuteri SD2112] gi|227184810|gb|EEI64881.1| NAD synthetase [Lactobacillus reuteri CF48-3A] gi|300892986|gb|EFK86345.1| NAD(+) synthase [Lactobacillus reuteri SD2112] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 33/214 (15%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ------TIMLPYKYTSPQS 335 D++Q +++G+SGG DS+L + +AV+ L +E + LPY + +S Sbjct: 33 DFLQTTKMKALVLGISGGQDSSLAGRLSQLAVEKLREETGDNEYQFIAVRLPYGEQADES 92 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---AENIQSRIRGNILM 392 DA ++ ++ + M L E + I NI++R R + Sbjct: 93 --DAMFAINDFIKPDKIMRVN--IKAATDAMVASLNEAGTPISDFNKGNIKARERMIVQY 148 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A+ +K ++ T + +E G+ T +GD PL L K Q L + + Sbjct: 149 AIGGENKGAVVGTDHAAEAVTGFYTKFGDGGADITPLSGLDKRQGKALLQYLGA------ 202 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 P + +K+P+A+L +P + D+E+L Sbjct: 203 --------PAKLYDKTPTADLEEDKPMRPDEEAL 228 >gi|170016852|ref|YP_001727771.1| NAD synthase [Leuconostoc citreum KM20] gi|169803709|gb|ACA82327.1| NAD synthase [Leuconostoc citreum KM20] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 72/290 (24%), Positives = 126/290 (43%), Gaps = 50/290 (17%) Query: 263 STMYI-PLQEEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDSALC---AAIAVDALG 317 +T+++ P+ + + + + V L+ Y++ N + +I +SGG DS L A IA+ L Sbjct: 10 ATLHVQPIIDPKQEISRSVDFLKQYLRLNPQYQSYVIAVSGGQDSTLAGKLAQIAIQELN 69 Query: 318 KEN----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 EN + I + Y + + DA A AL I + M+ L+ Sbjct: 70 SENHLQQYELIAVRQPYGAQRDEADAQA---ALAFIEPNQVITTNIKTATDAMTTALRT- 125 Query: 374 PSGIVAEN-----IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 SG+ ++ I+ ++R A++ + +++ T + +E G+ T YGD NP Sbjct: 126 -SGLAVDDMSRGSIKPKMRMIAQYAVAREHQGVVIGTDHAAEAFAGFFTKYGDGGTDINP 184 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP- 484 L L K Q Q+ + + P S+ EK P+A+L RP D+ +L Sbjct: 185 LWRLNKRQGRQMLAALQA--------------PHSLYEKVPTADLEDERPQLADEAALGV 230 Query: 485 PYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 Y +DD ++ V E + + +E+L SE KR + PV Sbjct: 231 SYNDIDDYLEGKVIAEHA------------AKTIENLYLASEQKRHE-PV 267 >gi|89097514|ref|ZP_01170403.1| NAD synthetase [Bacillus sp. NRRL B-14911] gi|89087810|gb|EAR66922.1| NAD synthetase [Bacillus sp. NRRL B-14911] Length = 274 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 35/228 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPYKYTSPQS 335 L+DY+ + ++G+SGG DS L A +AV+ L E + + LPY Q Sbjct: 30 LKDYLVASQAKGYVLGISGGQDSTLAGRLAQMAVEELRSEGHEVRFIAVRLPY---GVQQ 86 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF---LQEEP-SGIVAENIQSRIRGNIL 391 ED A A + K D ++ N ++ +F + EP S N+++R+R Sbjct: 87 DEDDAQLALSF-IKADTEYSFNVKNAVDAVKEEFDTITKGEPLSDYHKGNVKARMRMIAQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A+ +++ T + +E G+ T YGD PL L K Q Sbjct: 146 YAIGGQEGLLVIGTDHAAEAVTGFFTKYGDGGADILPLTGLTKRQ--------------- 190 Query: 452 GLGPLTEVIPPSILE-KSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G L E+ L K+P+A+L +P Q D+ L Y LDD ++ Sbjct: 191 GKALLKEMGAEERLYLKTPTADLLDNKPGQADETELGISYDELDDYLE 238 >gi|333003742|gb|EGK23278.1| NH(3)-dependent NAD(+) synthetase [Shigella flexneri VA-6] Length = 275 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 44/263 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD N L L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINLLYRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINND 507 + LG P + +K+P+A+L + D+ SLP D++ + +N + ++ Sbjct: 196 -LTALG-----CPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG- 240 Query: 508 QEYNDETVRYVEHLLYGSEYKRR 530 + ++ R +E+ +E+KRR Sbjct: 241 KNLPEQVARTIENWYLKTEHKRR 263 >gi|195607250|gb|ACG25455.1| hypothetical protein [Zea mays] Length = 311 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 19/201 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L K K+A+ QL+ V D NIA AR A E+A +G L+L E++ Y + Sbjct: 27 LSKFKVALCQLS-VTADKNRNIAHARAAIEKAASEGAKLVLLPEIWNGPYSNDSFPEYAE 85 Query: 62 FIQACSSAID--TLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDA-GNIIAVRDKIN 116 I+A A ++ S+ +VG ++ G + N+ I + G + KI+ Sbjct: 86 DIEAGGDAAPSFSMMSEVARSLQVTLVGGSIAERSGNNLYNTCCIFGSDGKLKGKHRKIH 145 Query: 117 L-----PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEF 170 L P F E +T +G N +V D+ R+GI IC DI + + +GA Sbjct: 146 LFDIDIPGKITFKESKTLTAG-QNPTVVDTDVGRIGIGICYDI-RFQELAMLYAARGAHL 203 Query: 171 L-----FSLNASPYYHNKLKK 186 L F++ P + L++ Sbjct: 204 LCYPGAFNMTTGPLHWELLQR 224 >gi|146974|gb|AAA79852.1| NH3-dependent NAD synthetase [Escherichia coli] Length = 274 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 44/260 (16%) Query: 286 YVQKNNFHK-VIIGLSGGIDSALCAAI---AVDAL----GKENVQ--TIMLPYKYTS-PQ 334 Y+Q F K +++G+SGG DS L + A++ L G E++Q + LPY + Q Sbjct: 32 YLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQ 91 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRGNIL 391 +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 92 DCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERMKAQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 146 YSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQL----------- 194 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINNDQEY 510 L L P + +K+P+A+L + D+ SLP D++ + +N + ++ + Sbjct: 195 -LAAL--ACPEHLYKKAPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEG-KNV 242 Query: 511 NDETVRYVEHLLYGSEYKRR 530 + R +E+ +E+KRR Sbjct: 243 PQQVARTIENWYLKTEHKRR 262 >gi|134300035|ref|YP_001113531.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfotomaculum reducens MI-1] gi|134052735|gb|ABO50706.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfotomaculum reducens MI-1] Length = 277 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 20/184 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+ Q+ G+I N++ + EA Q ++I F E+ I GY E F Sbjct: 1 MKSTKIALVQMQATFGNIDKNLSTLEKFINEAAAQQAEIICFPEMCIQGYSREIPDFLLQ 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNIIAVRDKINL-- 117 I AI LK + G I+ G + ++ + VVI NI R K +L Sbjct: 61 SIDG--EAILFLKKLAQNKGITIIAGMAEKCLNKRPFITQVVIRPGQNIDYYR-KTHLGN 117 Query: 118 ---PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 P Y +E +TF + + +GI IC D + L +GAE +F+ Sbjct: 118 SEQPYYQAGNEIKTFSTEKTT---------IGIQICWDT-HFPEMTTILSLRGAEVIFAP 167 Query: 175 NASP 178 +ASP Sbjct: 168 HASP 171 >gi|320103850|ref|YP_004179441.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Isosphaera pallida ATCC 43644] gi|319751132|gb|ADV62892.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Isosphaera pallida ATCC 43644] Length = 285 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 27/219 (12%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE---DLVFKKSFI 63 IA Q+ + A N+ A A G L + ELF SGY P V + Sbjct: 5 IAAVQIATTPFETAANLEAADDGLRRAWEHGAVLAVLPELFHSGYCPGCPYHTVAETLEG 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S ID + G I G +D E V N+++++DA ++A K +L F Sbjct: 65 PVASWLIDRARRF----GMMIAAGLVERDGEDVYNALILVDASGLLARYRKRHL----VF 116 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICED-----IWKNSNICKHLKKQGA---EFLFSLN 175 E+R F G S R R+G IC D +W++ L GA EF+ Sbjct: 117 WERRRFRPGRSQVVARTRWGRIGFAICADMLYRRVWRDYRDQVDLMVVGAAWPEFVHRST 176 Query: 176 ASPYYHNKLKKRHEIVTGQI-----SHVHLPIIYVNQVG 209 P++ L R + G++ + + +P++ NQ G Sbjct: 177 NRPHW---LLGRLGPLVGELPRLAAADLGVPVVVANQSG 212 >gi|229589992|ref|YP_002872111.1| NAD synthetase [Pseudomonas fluorescens SBW25] gi|229361858|emb|CAY48757.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas fluorescens SBW25] Length = 269 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 30/201 (14%) Query: 295 VIIGLSGGIDS----ALCAAIAVDALGKENVQT----IMLPYKYTSPQSLEDAAACAKAL 346 +++G+SGG+DS LC +AV L E + LPYK + + DA + + Sbjct: 43 LVLGISGGVDSLTAGRLCQ-LAVQQLRSEAYAARFIAMRLPYKTQADE--RDAQSSLDFI 99 Query: 347 GCKY-DVLPIHDLVNHFF-SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 + D L I V+ SL + E + N+++R R A++N +++ Sbjct: 100 TPDHIDTLNIAASVDGLMASLTATDASAEHVDFIKGNVKARTRMIAQYAVANLHNGLVVG 159 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T + +E +G+ T +GD + PL L KTQV LA S LG P ++ Sbjct: 160 TDHGAEALMGFFTKFGDGACDLAPLSGLTKTQVRLLA---------SALGA-----PVNL 205 Query: 465 LEKSPSA---ELRPHQTDQES 482 + K P+A EL P + D+ + Sbjct: 206 VHKPPTADLEELAPGKLDEHA 226 >gi|146339663|ref|YP_001204711.1| putative N-carbamoyl-D-amino acid hydrolase [Bradyrhizobium sp. ORS278] gi|146192469|emb|CAL76474.1| putative N-carbamoyl-D-amino acid hydrolase [Bradyrhizobium sp. ORS278] Length = 276 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 7/146 (4%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSA 69 + P+VG++A N+A + ++A QG L++ EL SGY + F S A Sbjct: 1 MQPMVGELATNLAHSLDLIQQAVAQGAKLVVLPELASSGYVFKSREEAFAASETIPNGPA 60 Query: 70 IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF 129 + G +V G +D + NS V++ I K++L N E F Sbjct: 61 MTAWSEIAAKHGLHLVAGICERDGTKLYNSAVLIGPKGYIGTFRKVHLWN----EENLYF 116 Query: 130 ISGYSNDPIVFRDI-RLGILICEDIW 154 G P+ +I R+G+ IC D W Sbjct: 117 EPGNLGFPVYHTEIGRIGMAICYDGW 142 >gi|312866365|ref|ZP_07726583.1| NAD+ synthase [Streptococcus downei F0415] gi|311098059|gb|EFQ56285.1| NAD+ synthase [Streptococcus downei F0415] Length = 274 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 35/228 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ-----TIMLPYKYTSP 333 L+ Y++K++F K ++G+SGG DS+L A IAV+ L E Q I LPY Sbjct: 30 LKAYLKKHSFLKSYVLGISGGQDSSLAGRLAQIAVEELRAETGQDYQFIAIRLPY---GV 86 Query: 334 QSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIR 387 Q+ ED A A A + P L +N ++ Q + +GIV NI++R R Sbjct: 87 QADEDDAQKALAF-----IQPDVSLSINIKEAVDGQVAELAKAGIVVSDFNKGNIKARQR 141 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ + ++ T + +E G+ T +GD PL L K Q QL + + Sbjct: 142 MITQYAVAGENSGAVIGTDHAAENLTGFFTKFGDGGADILPLFRLNKRQGKQLLAELGAD 201 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 L E IP + LE E +P D+ +L Y +DD ++ Sbjct: 202 ------KALYEKIPTADLE-----ENKPGIADEVALGVTYQDIDDYLE 238 >gi|323529776|ref|YP_004231928.1| NAD+ synthetase [Burkholderia sp. CCGE1001] gi|323386778|gb|ADX58868.1| NAD+ synthetase [Burkholderia sp. CCGE1001] Length = 286 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 38/231 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQS 335 L +Y++ N ++G+SGG+DS A +AV+ L E I LP+ + Sbjct: 36 LANYLRGNGLTSYVLGISGGVDSTTAGRLAQLAVERLRGERYDARFIAIRLPHG-----A 90 Query: 336 LEDAAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 +D A +AL D+ P D ++ F + V NI++R R Sbjct: 91 QKDEADAQQALAFIRADETLTIDIKPAADAMLASLHQSGLPFADDALEDFVHGNIKARQR 150 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A+++ +++ T + +E +G+ T +GD PL L K +V Sbjct: 151 MIAQYAVASTRAGVVIGTDHAAESLMGFFTKFGDGGADVLPLAGLNKRRV---------R 201 Query: 448 GITSGLG---PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 + LG L +P + LE LRP + D+++ PY +DD ++ Sbjct: 202 AVAKALGASDALAYKVPTADLEA-----LRPQRPDEDAYGVPYETIDDFLE 247 >gi|260774248|ref|ZP_05883163.1| NAD synthetase [Vibrio metschnikovii CIP 69.14] gi|260611209|gb|EEX36413.1| NAD synthetase [Vibrio metschnikovii CIP 69.14] Length = 279 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 38/222 (17%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT-------IMLPYKYTSPQSLEDAAAC-- 342 +++G+SGG+DS C A +AVD L +E QT + LPY + A Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVDQLNQEQ-QTQAYQFIAVRLPYGEQKDEQEAQLALSFI 98 Query: 343 ----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMALSN 396 A ++ K V +H +H + L + + + V N+++R R ++ Sbjct: 99 QPTHAVSVNIKAGVDGLH-AASHQALANTGLLPNDQAKVDFVKGNVKARARMIAQYEIAG 157 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + ++L T + +E G+ T YGD + PL L K QV LA+ + Sbjct: 158 YVGGLVLGTDHSAENITGFYTKYGDGACDLAPLFGLNKRQVRLLAATLGA---------- 207 Query: 457 TEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K P+A EL P + D+++L Y +DD ++ Sbjct: 208 ----PEVLVNKVPTADLEELAPQKADEDALNLTYQQIDDFLE 245 >gi|239638032|ref|ZP_04678991.1| NAD+ synthetase [Staphylococcus warneri L37603] gi|239596315|gb|EEQ78853.1| NAD+ synthetase [Staphylococcus warneri L37603] Length = 273 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 42/231 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCA---AIAVDALGKENVQ----TIMLPYKYTS-P 333 ++ YVQ ++F K +++G+SGG DS L +AV+ L +E + + LPY S Sbjct: 31 VKSYVQSHSFIKSLVLGISGGQDSTLAGRLVQLAVNELREEGRECQFIAVKLPYGVQSDA 90 Query: 334 QSLEDAAACAKA-LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ-----SRIR 387 +EDA A ++ P D S+ S LQE +GI + Q +R R Sbjct: 91 DEVEDALAFINPDQTITVNIKPAVDT-----SIKS--LQE--AGIQLTDFQKGNEKARER 141 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 + +++++ +++ T + +E G+ T YGD + PL L K Q L + ++ Sbjct: 142 MKVQFSIASNQSGIVVGTDHSAENITGFYTKYGDGAADIAPLFGLNKRQGRALLKYLDA- 200 Query: 448 GITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + +K+P+A+L +P D+E+L Y +DD ++ Sbjct: 201 -------------PAHLYKKTPTADLEEDKPQLPDEEALGVTYNDIDDYLE 238 >gi|57506775|dbj|BAD86641.1| putative N-carbamoylputrescine amidohydrolase [Selenomonas ruminantium] Length = 290 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/274 (20%), Positives = 110/274 (40%), Gaps = 34/274 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE----DLV 57 ++ + +A Q+ + ++ NI+KA EA +G +IL ELF Y + D Sbjct: 1 MRNVTVAAIQMK-MTAVVSENISKAEALVREAGAKGAQVILLPELFERPYFCQQRQYDFY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 + ++ + A+ + + + + F ++ + N++ +LDA G+++ V K + Sbjct: 60 AYATTVEE-NPAVKHFRPIAKELAVVMPISFYEREGTRLFNTIAMLDADGSVMGVYRKTH 118 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI-----CKHLKKQGAEFL 171 +P+ + EK F G + + + + W + I C + QGAE L Sbjct: 119 IPDDHYYQEKFYFTPGNTGFKVWIP------AMAKSAWAFAGISVPRSCPAMALQGAEML 172 Query: 172 F---SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQV-----------GGQ-DELI 215 ++ + P + + + G LP+I N++ GGQ L Sbjct: 173 LYPTAIGSEPILETDSMPHWRRCMQGHAGSNLLPVIAANRIGVEQVEPCAENGGQSSSLD 232 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 F G+SF D + + EQ + DQ Sbjct: 233 FYGSSFITDNTGAILVEAGRREEQVLTASFDLDQ 266 >gi|313887283|ref|ZP_07820974.1| hydrolase, carbon-nitrogen family [Porphyromonas asaccharolytica PR426713P-I] gi|312923202|gb|EFR34020.1| hydrolase, carbon-nitrogen family [Porphyromonas asaccharolytica PR426713P-I] Length = 291 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 24/265 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKS 75 D N+ + + + +G +LI+ EL Y ED+ + ++ + Sbjct: 13 DHTDNVHRLQERIRQLAHEGAELIVLQELHNGLYFCQTEDVALFDQAETIPGPSTESFGA 72 Query: 76 DTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG- 132 + G IV+ + G+ N+ V+L+ IA R K+++P+ ++EK F G Sbjct: 73 LARELGVVIVLSLFEKRATGLYHNTAVVLERDGSIAGRYRKMHIPDDPAYYEKFYFTPGD 132 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--SPYYHNKLKKRHEI 190 +PI RLGILIC D W + + +GAE L A + Y +++ +I Sbjct: 133 LGFEPIDTSVGRLGILICWDQWY-PEAARLMALKGAELLIYPTAIGTAAYDTPEEQQRQI 191 Query: 191 VTGQI---SHV---HLPIIYVNQVG------GQDELI-FDGASFCFDGQQQLAFQMKHFS 237 Q+ H +LP+I VN+VG G E I F G SF Q ++ + Sbjct: 192 DAWQLVQRGHAVANNLPVIAVNRVGYEPDPSGITEGIQFWGHSFVTGQQGEMLCDLSQTE 251 Query: 238 EQNFMTEWHYDQQ---LSQWNYMSD 259 E + E ++ W Y+ D Sbjct: 252 EAGAVVELDLERTELVRRWWPYLRD 276 >gi|284045667|ref|YP_003396007.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Conexibacter woesei DSM 14684] gi|283949888|gb|ADB52632.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Conexibacter woesei DSM 14684] Length = 311 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 22/187 (11%) Query: 74 KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY 133 ++D DG G+ G ++V+ G +++ K++LP + ++E R F G Sbjct: 114 RADGPDGPDGL----------GYNTAIVVAPDGRLVSRTRKLHLPVTAGYYEDRYFRPGP 163 Query: 134 SND---PIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA------SPYYHNK 183 + P+V D RLG C D W + + GAE + A P + + Sbjct: 164 AGSEPFPVVALDDARLGFPTCWDQW-FPELARAYSLAGAEVIVYPTAIGTEPDHPRFDTE 222 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 IV I++ ++ +N++G + L F G+SF D ++ Q + + Sbjct: 223 PLWERVIVANGIANGTF-MVAINRIGDEGPLTFYGSSFVSDPYGRVLVQAPRDAPAVLVA 281 Query: 244 EWHYDQQ 250 + DQ+ Sbjct: 282 DLDLDQR 288 >gi|87312019|ref|ZP_01094127.1| carbon-nitrogen hydrolase family protein [Blastopirellula marina DSM 3645] gi|87285258|gb|EAQ77184.1| carbon-nitrogen hydrolase family protein [Blastopirellula marina DSM 3645] Length = 298 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 41/266 (15%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPED---LVFKKSF-IQACSSAIDTLKSDT 77 N+ KA EA + G +++ ELF YP ++ L F+++ I +S + Sbjct: 27 NVDKAVARIAEAAQLGANIVCLQELFAGQYPCQEEDHLKFQEAEPIPGATSQAIQAAAAQ 86 Query: 78 HDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 H G +V + EG+ N+ I DA G + + K+++P+ ++EK F G Sbjct: 87 H--GVVVVASLFEKRAEGLYHNTAAIFDADGTQLGIYRKMHIPDDPHYYEKFYFTPG--- 141 Query: 136 DPIVFRDI-----RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK------- 183 + FR R+G+ IC D W + GA+ LF A + ++ Sbjct: 142 -DLGFRSFQTKYGRIGVCICWDQW-FPEAARLTALTGAQMLFYPTAIGWLVDEKEEYGPA 199 Query: 184 -------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 + + H I G + N+VG + + F G SF D L H Sbjct: 200 QVSAWETMMRSHSIANGVF------VCAPNRVGLEGTIEFWGHSFVSDPNGNLLKVGSHD 253 Query: 237 SEQNFMTEWHYDQ---QLSQWNYMSD 259 E+ + E + Q + W ++ D Sbjct: 254 QEEILLVECNLAQIDFARTHWPFLRD 279 >gi|256397256|ref|YP_003118820.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Catenulispora acidiphila DSM 44928] gi|256363482|gb|ACU76979.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Catenulispora acidiphila DSM 44928] Length = 275 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 31/217 (14%) Query: 16 VGDIAGNIAK----ARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAID 71 V D N+A ARRA E R L++ E++++GY V + A Sbjct: 23 VADRRANLAALDDTARRAAESGAR----LLITPEMYLTGYNLGAEVVAGLAEERFGPAQQ 78 Query: 72 TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH-----EK 126 + + G I+ G+P +D +GV+ + V L G D + NY + H ++ Sbjct: 79 EISAIAAKHGIAILYGYPERDGDGVVYNAVQLIGG------DGASKANYRKTHLFGDVDR 132 Query: 127 RTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--SPYYH 181 F G ++ +V D IR+G LIC D+ + H G + L A PY + Sbjct: 133 AAFAPG--SELVVQADLDGIRVGFLICYDVEFPEPVRAH-ADAGTQLLLVPTALMRPYEY 189 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 +IV + L + YVN+VG + + ++ G Sbjct: 190 VP----RQIVPARAIESQLFVAYVNRVGVERDFVYAG 222 >gi|148543522|ref|YP_001270892.1| NAD synthetase [Lactobacillus reuteri DSM 20016] gi|184152928|ref|YP_001841269.1| NAD synthetase [Lactobacillus reuteri JCM 1112] gi|227363523|ref|ZP_03847643.1| NAD synthetase [Lactobacillus reuteri MM2-3] gi|325681870|ref|ZP_08161388.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus reuteri MM4-1A] gi|189083395|sp|A5VI81|NADE_LACRD RecName: Full=NH(3)-dependent NAD(+) synthetase gi|229485730|sp|B2G5Q7|NADE_LACRJ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|148530556|gb|ABQ82555.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus reuteri DSM 20016] gi|183224272|dbj|BAG24789.1| NAD synthase [Lactobacillus reuteri JCM 1112] gi|227071460|gb|EEI09763.1| NAD synthetase [Lactobacillus reuteri MM2-3] gi|324978514|gb|EGC15463.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus reuteri MM4-1A] Length = 275 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 33/226 (14%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ------T 323 +A+ V + D++Q +++G+SGG DS+L + +AV+ L +E Sbjct: 21 QAEVTKRVQFICDFLQTTKMKALVLGISGGQDSSLAGRLSQLAVEKLREETGDNEYQFIA 80 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---AE 380 + LPY + +S DA ++ ++ + M L E + I Sbjct: 81 VRLPYGEQADES--DAMFAINDFIKPDKIMRVN--IKAATDAMVASLNEAGTPISDFSKG 136 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 NI++R R + A+ +K ++ T + +E G+ T +GD PL L K Q L Sbjct: 137 NIKARERMIVQYAIGGENKGAVVGTDHAAEAVTGFYTKFGDGGADITPLSGLDKRQGKAL 196 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 + + P + +K+P+A+L +P + D+E+L Sbjct: 197 LQYLGA--------------PAKLYDKTPTADLEEDKPMRPDEEAL 228 >gi|328470233|gb|EGF41144.1| NAD synthetase [Vibrio parahaemolyticus 10329] Length = 276 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 44/237 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSAL---CAAIAVDALGKENVQ------TIMLPYKYTSP 333 ++ +Q+ +++G+SGG+DS A +AVD L +E + LPY Sbjct: 28 IKRKLQEAGCKSLVLGISGGVDSTTLGRLAQLAVDQLNEETGSNDYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACA---------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG---IVAEN 381 Q ED A A ++ K V +H N +L L E + V N Sbjct: 85 QKDEDEAQLALSFIKPTHSVSVNIKQGVDGMHAASN--VALEGTGLMPEDAAKVDFVKGN 142 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++R R ++ + ++L T + +E G+ T +GD + PL L K QV ++A Sbjct: 143 VKARARMIAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVREVA 202 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 + + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 203 ATLGA--------------PEVLVKKVPTADLEELAPQKADEDALNLTYEQIDDFLE 245 >gi|326476078|gb|EGE00088.1| hypothetical protein TESG_07411 [Trichophyton tonsurans CBS 112818] gi|326484047|gb|EGE08057.1| aliphatic nitrilase [Trichophyton equinum CBS 127.97] Length = 335 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 16/144 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 LK+AI Q P D+AG++ K EA + G L+ F E +I GYP P D + Sbjct: 6 LKVAITQAQPKWLDLAGSVEKTVNLIAEAAKGGARLVAFPECWIPGYPGWIWQRPVDPII 65 Query: 59 KKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGV-LNSVVILDAGNIIAVR 112 +IQ S+ ++ +KS +V+GF D V + +I G ++ R Sbjct: 66 NTKYIQNSLSVNSAEMNIIKSAAKANNIAVVLGFVEAIDTHSVYIAQAIISPKGELLMHR 125 Query: 113 DKINLPNYSEFHEKRTFISGYSND 136 K+ P + E+ F G +D Sbjct: 126 RKVK-PTHM---ERTVFGDGSGSD 145 >gi|313203381|ref|YP_004042038.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paludibacter propionicigenes WB4] gi|312442697|gb|ADQ79053.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paludibacter propionicigenes WB4] Length = 245 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQ+ + G+I N+ + +EA + D+++F EL ++GY P DL + Q Sbjct: 1 MRIAIAQIEVIKGNIEKNLENHLKWIKEAIQNKADMVVFPELSVTGYEP-DLAAGLATNQ 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL 103 + +D ++S + G I VG P +D+ S++I Sbjct: 60 D-DTRLDEMQSLSDKNGITIGVGLPTKDESDTFVSMIIF 97 >gi|193214661|ref|YP_001995860.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Chloroherpeton thalassium ATCC 35110] gi|193088138|gb|ACF13413.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chloroherpeton thalassium ATCC 35110] Length = 290 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 16/231 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK-SFI 63 +K+ + QL+ + N+ K + A QG +I ELF + Y + ++ S Sbjct: 6 VKLGLVQLS-CTANAEENLEKTIQQIRLAAEQGAQIICTQELFQTLYFCQTEAYEPFSLA 64 Query: 64 QACSSA-IDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNY 120 ++ D L + + G IV + +G+ N+ +LDA G + K+++P+ Sbjct: 65 ESIPGKNTDRLATLAKELGVVIVASLFEKRAQGLYHNTAAVLDADGTYLGKYRKMHIPDD 124 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F+EK F G + + ++G+LIC D W + QGA+ LF A + Sbjct: 125 PGFYEKFYFTPGDLGFKVFETKFAKIGVLICWDQW-YPEAARLTALQGAQILFYPTAIGW 183 Query: 180 ------YHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDELIFDGASF 221 + + T Q SH + + VN++G +D+L F G SF Sbjct: 184 SVTENDAATRTAQHQAWATIQKSHAIANGVFVAAVNRIGQEDDLKFWGQSF 234 >gi|328956699|ref|YP_004374085.1| NAD+ synthase [Carnobacterium sp. 17-4] gi|328673023|gb|AEB29069.1| NAD+ synthase [Carnobacterium sp. 17-4] Length = 275 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 48/264 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY++K +F K +++G+SGG DS L ++ A+ + +T + LPY Sbjct: 31 LKDYLKKQSFLKTLVLGISGGQDSTLVGKLSQLAMTELREETGDNDYQFIAVRLPY---G 87 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI---VAENIQSRIRGN 389 Q+ E A A A V+ ++ V + L++ + + V NI++R R Sbjct: 88 EQADEKDAMDAIAFIEADKVVKVN--VKPGVDATVKTLEDSGTSVSDFVKGNIKARQRMI 145 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 I A++ ++ T + +E G+ T +GD NP+ L K R + Sbjct: 146 IQYAIAGSHNGTVVGTDHSAESVTGFFTKFGDGGTDINPIFRLNK---------RQGKAL 196 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFIN 505 LG P + +K P+A+L +P D+++L Y +DD ++ Sbjct: 197 LEELGA-----PEHLYKKIPTADLEENKPSLPDEKALGVTYDQIDDYLE----------- 240 Query: 506 NDQEYNDETVRYVEHLLYGSEYKR 529 ++ +E + +E+ +E+KR Sbjct: 241 -GKDVPEEAAQKIENWYVKTEHKR 263 >gi|126649635|ref|ZP_01721876.1| NAD(+) synthetase [Bacillus sp. B14905] gi|126593960|gb|EAZ87883.1| NAD(+) synthetase [Bacillus sp. B14905] Length = 274 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 34/228 (14%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKE------NVQTIMLPYKYTS 332 L++Y + +F K ++G+SGG DS L A +AVD L KE + I LPY + Sbjct: 30 LKEYAKHYSFVKGFVLGISGGQDSTLTGKLAQLAVDELNKEAGEMKYSFWAIRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 Q +DA K G + I D V+ ++ + + V N ++R R + Sbjct: 90 DEQDCQDAIDYIKPTGSY--TVNIKDAVDASVRALAN-AGVQLNDFVKGNEKARERMKVQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ + A++L T + +E G+ T +GD P+ L K Q QL Sbjct: 147 YSIAAMNGAVVLGTDHAAEAITGFYTKFGDGGADLMPIFRLNKRQGKQL----------- 195 Query: 452 GLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L E+ P + K P+A+L RP D+ +L Y +DD ++ Sbjct: 196 ----LAELKCPEHLYMKVPTADLEENRPSLPDEVALGVSYDQIDDYLE 239 >gi|116049174|ref|YP_792024.1| putative N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa UCBPP-PA14] gi|296390400|ref|ZP_06879875.1| putative N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa PAb1] gi|313106202|ref|ZP_07792455.1| putative N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa 39016] gi|115584395|gb|ABJ10410.1| putative N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa UCBPP-PA14] gi|310878957|gb|EFQ37551.1| putative N-carbamoylputrescine amidohydrolase [Pseudomonas aeruginosa 39016] Length = 303 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 22/227 (9%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVFKKSFIQACSSAIDTLKSD 76 N+ +A R EA +G L+L ELF + Y L ++F S + S Sbjct: 20 NLDRAERLVREAAARGAQLVLLQELFATPYFCIEQDHRHLRLAETFRG--SRVLARFSSL 77 Query: 77 THDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 + G + + + + NS+ + DA G ++ V K ++PN + EK F G S Sbjct: 78 ARELGVVLPLSWYERAGNARFNSLAVADADGRLLGVYRKAHVPNAIGYQEKEYFSPGDSG 137 Query: 136 DPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRHEIV 191 + + R+G+ IC D W + L GAE L ++ + P + H + Sbjct: 138 FRVWDTAVGRIGVGICWDQW-FPETARCLALLGAEVLLFPTAIGSEPGAAQLDSRDHWQI 196 Query: 192 T--GQISHVHLPIIYVNQVG-----GQDELI--FDGASFCFDGQQQL 229 GQ + +P++ N++G G L F G+SF D + L Sbjct: 197 AQRGQAAANLVPLVAANRIGREVACGDPALAMRFYGSSFIADHKGAL 243 >gi|40890221|gb|AAR97455.1| nitrilase [uncultured organism] Length = 334 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 14/133 (10%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------- 52 K ++ A Q+ PV+ D K +EA G ++++F E FI YP Sbjct: 5 KTIRAAAVQIAPVMEDRKATTDKVCAYIQEAGENGAEIVVFPETFIPNYPYFSFVKPPVL 64 Query: 53 --PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 + L ++ S D + S G +V+G + + N+ ++ DA G+I+ Sbjct: 65 AGKDHLTLYDQAVEIPSPTTDQVGSMAKKWGIVVVLGVNERSHGTLYNAQIVFDATGDIV 124 Query: 110 AVRDKINLPNYSE 122 VR KI P Y E Sbjct: 125 LVRRKIT-PTYHE 136 >gi|126179981|ref|YP_001047946.1| peptidyl-arginine deiminase [Methanoculleus marisnigri JR1] gi|125862775|gb|ABN57964.1| agmatine deiminase [Methanoculleus marisnigri JR1] Length = 639 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 12/238 (5%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--EDLVFKKSFIQACSSAIDTLKS 75 D N+ + + A +G ++ EL+ + Y P ED + + + + Sbjct: 18 DPGRNLERTLGMAKAAIAKGARILCLQELYRAPYFPQYEDTDASRYAETIPGPSTEAFSA 77 Query: 76 DTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGY 133 + G IVV + G N+ V++DA G ++ K+++P F+EK F+ G Sbjct: 78 LAREHGVVIVVPVYERTISGEHYNTAVVIDADGRLLPAYRKVHVPYDPLFYEKIYFLPGD 137 Query: 134 SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA-------SPYYHNKLKK 186 R R+ +LIC D W + + GAEF+F A P + + Sbjct: 138 RYRVYDTRYGRIAVLICYDQWF-PEAARAVALMGAEFIFYPTAIGRIAGEEPPEGDWREA 196 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + G + + VN+VG + +L F G+SF D + + E+ + E Sbjct: 197 WETVQRGHAIANSVHVAAVNRVGDEGDLRFFGSSFVADAFGNVLARASETGEEILIVE 254 >gi|325523956|gb|EGD02162.1| NAD synthetase [Burkholderia sp. TJI49] Length = 292 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 36/259 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ ++G+SGG+DS+ A +AV+ L E+ + + P ++ D Sbjct: 36 LAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLAVERLRAEDYDARFIAMRL--PNGVQND 93 Query: 339 AAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 94 EADAQRALAFVRADEILTVDVKPAADAMLASLAAAGHAFETPAQQDFVHGNIKARERMIA 153 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ ++ +++ T + +E +G+ T +GD PL L K +V +A Sbjct: 154 QYAVAGATRGIVIGTDHAAESLMGFFTKFGDGGADVLPLAGLNKRRVRAVAR------AL 207 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEY 510 G L +P + LE ELRP + D+ + Y + D I +E + Sbjct: 208 GGDEALVMKVPTADLE-----ELRPLRPDEHA---YGVSYDEIDDFLEG--------KPV 251 Query: 511 NDETVRYVEHLLYGSEYKR 529 +D V GS +KR Sbjct: 252 SDHVYETVLRFFDGSRHKR 270 >gi|156554162|ref|XP_001599587.1| PREDICTED: similar to ENSANGP00000002264 [Nasonia vitripennis] Length = 293 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 13/197 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 + ++A+AQ++ V D NI KA ++A +QG D++ E F S Y Sbjct: 16 IFTAFRLALAQIS-VTSDKGANIDKAISFIDKAKQQGADIVTLPECFNSPYGTNHFPEYA 74 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDK----- 114 I + ++I + +G I P +D + + N+ + + G +IA K Sbjct: 75 EVIPSGETSIALANAAKKNGICVIGGTIPERDGDKLFNTCTVWNPNGELIAKHRKMHLFD 134 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL--- 171 I++ + F E T SG + ++GI IC DI + + + + +G + L Sbjct: 135 IDIKDKITFRESDTLSSGNELTMFEAKGCKIGIGICYDI-RFEEMARLYRNRGCQMLIYP 193 Query: 172 --FSLNASPYYHNKLKK 186 F++ P + L++ Sbjct: 194 AAFNMTTGPLHWTLLQR 210 >gi|239996338|ref|ZP_04716862.1| NAD synthetase [Alteromonas macleodii ATCC 27126] Length = 278 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 39/227 (17%) Query: 290 NNFHKVIIGLSGGIDSAL---CAAIAVDALGKENVQ-----TIMLPYKYTSPQSLEDAAA 341 + + +++G+SGGIDS A +AV+ L E+ + + LPY Q+ ED A Sbjct: 36 SGLNSLVLGISGGIDSCTLGRLAQLAVNELNDEHHEKYQFIAVRLPY---DTQADEDDAQ 92 Query: 342 CA-----KALGCKYDVLPIHDLVNHFFS--LMSQFL---QEEPSGIVAENIQSRIRGNIL 391 + + +V P D ++ S L S L E V N+++R R I Sbjct: 93 KSIDFIQPSHSLAVNVKPGADAIHASTSQALASANLLPDNEAKQDFVKGNVKARTRMVIQ 152 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ ++L T + +E G+ T YGD + PL L K QV +A+ + Sbjct: 153 YEIAGMVDGLVLGTDHSAENITGFYTKYGDGACDLAPLFGLSKRQVRAVAAHLGA----- 207 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 P +++ K+P+A+L P + D+++L Y +DD ++ Sbjct: 208 ---------PHNVITKAPTADLESLSPQKADEQALGMSYDQIDDFLE 245 >gi|77359052|ref|YP_338627.1| NAD synthetase [Pseudoalteromonas haloplanktis TAC125] gi|123587644|sp|Q3IF87|NADE_PSEHT RecName: Full=NH(3)-dependent NAD(+) synthetase gi|76873963|emb|CAI85184.1| NAD synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 278 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 44/225 (19%) Query: 295 VIIGLSGGIDSALCA---AIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS++C +AV+ L +E T + LPY Q+ E+ A A Sbjct: 40 LVLGISGGVDSSVCGRLCQLAVNELNQEQSTTDYKFVAVRLPYGV---QADENEAQLAVD 96 Query: 344 ---KALGCKYDVLPIHDLVNHFFSLMSQFL-------QEEPSGIVAENIQSRIRGNILMA 393 + ++ P D ++ M+ + ++E + N+++R R Sbjct: 97 FIQPSSRMTVNIKPATDALHE--QTMAAIVGNGESLPEQEKIDFIKGNVKARQRMIAQYE 154 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ + +++ T + +E G+ T +GD + PL L K QV L S + + Sbjct: 155 IAAFCQGLVVGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVRALGSTLGASSV---- 210 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 ++ K+P+A+L RP TD+E+L Y +DD ++ Sbjct: 211 ----------LVNKAPTADLESDRPGLTDEEALGLSYEQIDDFLE 245 >gi|239939904|ref|ZP_04691841.1| putative hydrolase [Streptomyces roseosporus NRRL 15998] gi|239986390|ref|ZP_04707054.1| putative hydrolase [Streptomyces roseosporus NRRL 11379] Length = 265 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 22/232 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+ Q + G +A N+ A A G L++ ELF++GY D V + Sbjct: 1 MPSLRTALLQSSGRPGAVAENLKTLDEAAARAAGAGARLLVAPELFLTGYAIGDAVPVLA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A + + G ++ G+P +D E + N+ ++ A D + L NY Sbjct: 61 -EPADGPGAEAVAEIAVRHGLAVLYGYPERDGERIFNASQLIGA-------DGVRLANYR 112 Query: 122 EFH-----EKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 + H E+ F G +V D IR+G+LIC D+ N+ H G + L Sbjct: 113 KTHLFGCFEQEWFTPGEQT--VVQADLDGIRIGLLICYDVEFPENVRAH-ALAGTDLLLV 169 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 A H +V + + + YVN+ G + E F G S C G Sbjct: 170 PTAQ--MHPFQFVAESVVPVRAFESQMYVAYVNRTGPEGEFEFVGLS-CLAG 218 >gi|298484027|ref|ZP_07002196.1| glycosyl hydrolase, family 10 [Bacteroides sp. D22] gi|298269808|gb|EFI11400.1| glycosyl hydrolase, family 10 [Bacteroides sp. D22] Length = 294 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+K+ I Q + DI N+ ++ E G LI+ EL S Y Sbjct: 1 MKKIKVGIIQQSNT-ADIRVNLMNLAKSIEACAAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTNLFDLAEPIPGPSTGFYSELAAANKAVLVTSLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ- 211 GAE L A + + K ++ + + Q +H LP+I VN+VG GQ Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSGQT 228 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + ++F G SF Q + Q + +N + E Sbjct: 229 NGILFWGNSFVAGPQGEFLAQAGNDHPENMVVE 261 >gi|260903882|ref|ZP_05912204.1| NAD synthetase [Brevibacterium linens BL2] Length = 275 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 28/224 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQT----IMLPYKYTSPQS 335 L DY+ + +G+SGG DS L +AV+ L + I LP+ + +S Sbjct: 31 LADYILTTGVRGLTLGISGGQDSTLAGRLCQLAVEELRRRGAAAEFWAIRLPHHVQADES 90 Query: 336 LEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 DA + + ++ V+ I + + + E + N+++R+R L Sbjct: 91 --DAQDALEFIRADHELVINIGSATDAAAAEYNTATGEAITDFGKGNVKARMRMIAQFEL 148 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++ T + +E G+ T +GD + PL L K R + LG Sbjct: 149 AGEKRLLVAGTDHAAEAVTGFFTKFGDGAADVVPLAGLNK---------RQGRALLDHLG 199 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P ++ K P+A+L P QTD+ SL Y +DD ++ Sbjct: 200 A-----PEHLVRKVPTADLLDDAPGQTDESSLGLSYDQIDDFLE 238 >gi|295084224|emb|CBK65747.1| Predicted amidohydrolase [Bacteroides xylanisolvens XB1A] Length = 294 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+K+ I Q + DI N+ ++ E G LI+ EL S Y Sbjct: 1 MKKIKVGIIQQSNT-ADIRVNLMNLAKSIEACAAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTNLFDLAEPIPGPSTGFYSELAAANKVVLVTSLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ- 211 GAE L A + + K ++ + + Q +H LP+I VN+VG GQ Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSGQT 228 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + ++F G SF Q + Q + +N + E Sbjct: 229 NGILFWGNSFVAGPQGEFLAQAGNDHPENMVVE 261 >gi|221215298|ref|ZP_03588263.1| carbon-nitrogen hydrolase family protein [Burkholderia multivorans CGD1] gi|221164730|gb|EED97211.1| carbon-nitrogen hydrolase family protein [Burkholderia multivorans CGD1] Length = 293 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 44/188 (23%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY------------- 51 LKIA Q +P+ GD+AGN+ ++ E+A G +++ EL +GY Sbjct: 9 LKIACLQFSPLFGDVAGNLQRSIAMIEKAADAGARIVVLPELANTGYTFKSRAEAFELAE 68 Query: 52 PPEDLVFKKSF--IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNII 109 P D +++ + AC + I IV G ++ + NS V+LD + Sbjct: 69 PVPDGRSTQAWAEVAACRNLI-------------IVAGITEREDNCLYNSAVVLDPSGTL 115 Query: 110 AVRDKINLPNYSEFHEKR------TFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 K++L + +R F + Y R+G+ IC D W + + Sbjct: 116 GTYRKLHLWGDENLYFERGNLGVPVFATPYG---------RIGVAICYDGWF-PEVFRLA 165 Query: 164 KKQGAEFL 171 QGA+ + Sbjct: 166 AVQGADLM 173 >gi|138894509|ref|YP_001124962.1| Nitrilase [Geobacillus thermodenitrificans NG80-2] gi|134266022|gb|ABO66217.1| Nitrilase [Geobacillus thermodenitrificans NG80-2] Length = 271 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 15/225 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA QL+ GD N +A +A E A ++G D+I+ EL+ +GY DL Sbjct: 3 IRIACLQLDIAFGDPQKNEQQAEKAVELAVKEGADIIVLPELWTTGY---DLTRLDEIAD 59 Query: 65 ACSSAIDTLKSD-THDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 + T S G V G ++ GV N++++ + G II K++L + Sbjct: 60 DNAERAKTFASRLAQTYGIHFVAGSVAKKTDAGVTNTMIVANRNGQIIKEYSKVHL--FQ 117 Query: 122 EFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 E SG N+P +F ++ +IC DI I H GAE LF + P Sbjct: 118 LMDEHLHLQSG--NEPGLFSLDELSCAGVICYDIRFPEWIRTH-ALSGAELLFVVAEWPL 174 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 175 --PRLHHWRTLLMARAIENQCYVVACNRAGSDPNNVFAGHSLIID 217 >gi|239925824|gb|ACS35546.1| aliphatic amidase [Nesterenkonia sp. AN1] Length = 263 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 12/197 (6%) Query: 29 AREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF 88 A A+ QG L+L ELF GY P + + S Q +A L+ D G +V Sbjct: 25 AAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQ-VDAARSRLRGIARDRGIALVWSL 83 Query: 89 P---RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIR- 144 P +Q G+ + + G ++A K+ L Y EK F+ G P++ R Sbjct: 84 PGPEGPEQRGITAELAD-EHGEVLASYQKVQL--YGP-EEKAAFVPGEQPPPVLSWGGRQ 139 Query: 145 LGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIY 204 L +L+C D+ + + + +GA+ + A ++ ++ + + + Y Sbjct: 140 LSLLVCYDV-EFPEMVRAAAARGAQLVLVPTA--LAGDETSVPGILLPARAVENGITLAY 196 Query: 205 VNQVGGQDELIFDGASF 221 N G + L+FDG S Sbjct: 197 ANHCGPEGGLVFDGGSV 213 >gi|39935483|ref|NP_947759.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris CGA009] gi|39649335|emb|CAE27857.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris CGA009] Length = 579 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 11/158 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + LK+A Q P++ + NIA+ EEA G LI+ E+ +GY D Sbjct: 1 MSQLLKVATVQFEPIMAEKERNIARLLELCEEAAVGGAKLIVTPEMGTTGYCWYDRAEVA 60 Query: 61 SFIQACSSAIDTLKSD---THDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKIN 116 F++ A ++ HD IVVG P D++G+ NS V++ +I K Sbjct: 61 PFVEPIPGATTARFAELARKHD--CYIVVGLPEVDEDGIYYNSAVLIGPEGLIGRHRK-- 116 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDI 153 + E + +G ++ + I R+ +LIC DI Sbjct: 117 --THPYISEPKWSAAGDLHNQVFDTPIGRIALLICMDI 152 >gi|322391017|ref|ZP_08064521.1| NH(3)-dependent NAD(+) synthetase [Streptococcus parasanguinis ATCC 903] gi|321142247|gb|EFX37721.1| NH(3)-dependent NAD(+) synthetase [Streptococcus parasanguinis ATCC 903] Length = 274 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 36/258 (13%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDASYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE------EPSGIVAENIQSRIRGNIL 391 D A KAL + P LV + + ++ E S NI++R R Sbjct: 90 DEADAQKALAF---IQPDVSLVVNIKESADEMVRAVEATGTEVSDFNKGNIKARSRMIAQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 AL+ ++ T + +E G+ T +GD PL L K Q QL Sbjct: 147 YALAGARSGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNKRQGKQL---------LK 197 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 LG P++ EK P+A+L +E P I D++ + NE ++ + Sbjct: 198 ALGA-----DPALYEKIPTADL------EEEKP--GIADEVALGVTYNEIDDYLEGKQVS 244 Query: 512 DETVRYVEHLLYGSEYKR 529 E +E Y ++KR Sbjct: 245 PEAQATIEKWWYKGQHKR 262 >gi|319947561|ref|ZP_08021791.1| NH(3)-dependent NAD(+) synthetase [Streptococcus australis ATCC 700641] gi|319746249|gb|EFV98512.1| NH(3)-dependent NAD(+) synthetase [Streptococcus australis ATCC 700641] Length = 274 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 28/253 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+DY+QK+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDPQEEIRRSIDFLKDYLQKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDA 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 Y++ + P ++ D A KAL + + + M + ++ + + Sbjct: 75 SYQFVAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESVDAMERAVEATGTDVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARSRMVAQYALAGAYSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII-- 493 L LG P++ EK P A+L +P D+ +L Y +DD + Sbjct: 195 L---------LQALGA-----DPALYEKVPIADLEEEKPGIADEVALGVTYAEIDDYLEG 240 Query: 494 KRIVENEESFINN 506 K + ++ I N Sbjct: 241 KSVSPEAQATIEN 253 >gi|89093553|ref|ZP_01166501.1| NAD(+) synthetase [Oceanospirillum sp. MED92] gi|89082243|gb|EAR61467.1| NAD(+) synthetase [Oceanospirillum sp. MED92] Length = 277 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 42/235 (17%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE----NVQTIMLPYKYTSPQ 334 +L QKN +I+G+SGG+DS+ C A +AV+AL +E + Q I + + Q Sbjct: 32 TLTSSGQKN----LILGISGGVDSSTCGRLAQLAVEALNQEHNTNSYQFIAMRLPFGIQQ 87 Query: 335 SLEDAAACAK--------ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---AENIQ 383 +DA + + K V IH V +L L G + N++ Sbjct: 88 DEDDAQLALQFIKPSQSITVNVKPGVEGIHAEV--LSALEDSDLNSASEGAIDFAKGNVK 145 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R R ++ +++ T + +E G+ T +GD + PL L K QV LA Sbjct: 146 ARARMVAQYEIAGIVGGLVIGTDHSAENITGFYTKWGDGACDLAPLFGLSKRQVRMLAKE 205 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 + P ++EK+P+A+L P + D+++L Y +DD ++ Sbjct: 206 LGA--------------PELLVEKTPTADLECLTPQKADEQALGLTYNQIDDFLE 246 >gi|114562718|ref|YP_750231.1| NAD synthetase [Shewanella frigidimarina NCIMB 400] gi|122300112|sp|Q084C2|NADE_SHEFN RecName: Full=NH(3)-dependent NAD(+) synthetase gi|114334011|gb|ABI71393.1| NH(3)-dependent NAD(+) synthetase [Shewanella frigidimarina NCIMB 400] Length = 276 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 36/221 (16%) Query: 295 VIIGLSGGIDSALCA---AIAVDALGKENVQ------TIMLPYKYTSPQSLEDAAACAKA 345 +++G+SGG+DS+L +AV++L +E + LPY ++ E AC Sbjct: 40 LVLGISGGVDSSLAGRLCQLAVNSLNQEKASDEYQFIAVRLPYHVQQDEA-EAQLACQFI 98 Query: 346 LGCKYDVLPIHDLV-----NHFFSLMSQFLQEEPSG---IVAENIQSRIRGNILMALSNH 397 K + +HD V L + L +G + N+++R+R + ++ Sbjct: 99 QPSKQVTVNVHDGVVGIHNATLKGLTAAGLSSTDAGKTDFLKGNVKARMRMIVQYDIAGA 158 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 +++ T + +E G+ T +GD + PL L K QV LA+ + Sbjct: 159 MGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRLLAAHLGA----------- 207 Query: 458 EVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P +++K+P+A+L +P D+ +L Y +DD ++ Sbjct: 208 ---PEILVKKAPTADLEDNKPQLEDEVALGLTYDQIDDFLE 245 >gi|207108340|ref|ZP_03242502.1| carbon-nitrogen hydrolase [Helicobacter pylori HPKX_438_CA4C1] Length = 225 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 31 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 89 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 90 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 149 Query: 208 VG 209 VG Sbjct: 150 VG 151 >gi|126666365|ref|ZP_01737344.1| NAD synthetase [Marinobacter sp. ELB17] gi|126629166|gb|EAZ99784.1| NAD synthetase [Marinobacter sp. ELB17] Length = 286 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 37/233 (15%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI---------MLPYKY 330 V L + +Q +++G+SGG+DS + + L + ++TI LPY Sbjct: 34 VTFLCETLQSAGRSTLVLGISGGVDSLVAGKLC--QLAADQMKTIDPEARFIAVRLPY-- 89 Query: 331 TSPQSLEDAAACAKALG-----CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 Q EDAA A D+ P D ++ + + E + N+++R Sbjct: 90 -GEQVDEDAAQAALQFIDPDRIMNVDIKPSVDALHAAVVVNDSEISLERADFERGNVKAR 148 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +R ++ + +++ T + +E G+ T +GD + PL+ L K QV +LAS Sbjct: 149 VRMTAQYEIAALNNGLVVGTDHNAEAVTGFFTKWGDGACDLLPLRGLSKRQVRRLASELG 208 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAE---LRPHQTDQESLP-PYPILDDIIK 494 + +G K +A+ LRP D++ L Y ++DD ++ Sbjct: 209 ASDEMAG--------------KPATADLECLRPQLADEDVLGLSYDVIDDFLE 247 >gi|319939687|ref|ZP_08014046.1| NH(3)-dependent NAD(+) synthetase [Streptococcus anginosus 1_2_62CV] gi|319811276|gb|EFW07582.1| NH(3)-dependent NAD(+) synthetase [Streptococcus anginosus 1_2_62CV] Length = 274 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 42/276 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + + L+DY++K +F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDPEEEIRKSIDFLKDYLKKYSFLKTYVLGISGGQDSTLAGRLAQLAIEEMRAETGDA 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + LPY Q+ E+ A A A + DV + ++ ++ E Sbjct: 75 SYQFIAVRLPY---GVQADEEDAQRALAF-IQPDVSLVVNIKESADAMTKAV--EATGAT 128 Query: 378 VAE----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 V++ NI++R R AL+ K ++ T + +E G+ T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYKGAVVGTDHAAENVTGFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDII 493 K Q QL + LG ++ EK P+A+L +E P I D++ Sbjct: 189 KRQGKQL---------LAALGA-----DSALYEKVPTADL------EEEKP--GIADEVA 226 Query: 494 KRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 + NE + +D+ +E + E+KR Sbjct: 227 LGVTYNEIDDYLEGKTISDQAKARIESWWHKGEHKR 262 >gi|261212628|ref|ZP_05926912.1| NAD synthetase [Vibrio sp. RC341] gi|260837693|gb|EEX64370.1| NAD synthetase [Vibrio sp. RC341] Length = 276 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 50/228 (21%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQ---------TIMLPYKYTSPQSLEDAAACAKA 345 +++G+SGG+DS C +A A+ + N Q + LPY Q E+ A A + Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTSDYQFIAVRLPY---GEQKDEEEAQLALS 96 Query: 346 LGCKYDVLPIHDL-------VNHFFSLMSQFLQE------EPSGI--VAENIQSRIRGNI 390 + P H + V+ + Q L +P+ I + N+++R R Sbjct: 97 F-----IRPTHSVSVNIKAGVDGLHAASQQALANTGLVPTDPAKIDFIKGNVKARARMVA 151 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 ++ + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 152 QYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLYGLNKRQVRLLAETLGA---- 207 Query: 451 SGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 208 ----------PAQLVHKTPTADLEELAPQKADEAALNLTYEQIDDFLE 245 >gi|163796003|ref|ZP_02189966.1| hydrolase, carbon-nitrogen family protein [alpha proteobacterium BAL199] gi|159178758|gb|EDP63296.1| hydrolase, carbon-nitrogen family protein [alpha proteobacterium BAL199] Length = 269 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 43/201 (21%) Query: 40 LILFTELFISGYP-----------PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF 88 L++ E+F++GY P D ++ + C TH G ++ G+ Sbjct: 36 LLVTPEMFLTGYAIGADAVARLAEPADGPAAQAVVAICR---------TH--GTAVLYGY 84 Query: 89 PRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIV-FR 141 P + +G V N+V ++DA D + NY + H ++ F +G + PIV F Sbjct: 85 PERGADGAVYNAVQLIDA-------DGMRRANYRKTHLFGEVDRAQFSAGDAPSPIVEFG 137 Query: 142 DIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLNASPYYHNKLKKRHEIVTGQISHVH 199 +R+G IC DI + + + L GAE + N +P+ + +V + Sbjct: 138 GLRVGFAICYDI-EFPEVARALALAGAEVALVPTANMTPFESVATR----LVPARADENT 192 Query: 200 LPIIYVNQVGGQDELIFDGAS 220 L + Y N VG + + G S Sbjct: 193 LFVAYANYVGREAGFTYCGLS 213 >gi|300711637|ref|YP_003737451.1| nitrilase [Halalkalicoccus jeotgali B3] gi|299125320|gb|ADJ15659.1| nitrilase [Halalkalicoccus jeotgali B3] Length = 269 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 21/191 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQL+ GD+ GN+ +A A ++A + D++ E+F GY + ++++ Sbjct: 1 MKIALAQLDIEHGDVKGNVERAIEAIDDAAGRDADIVCLPEIFNVGYFAFE-AYERAAEG 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-----------QEGVLNSVVILD-AGNIIAVR 112 + L + G ++ G +D EG+ N+ V+ D AG AV Sbjct: 60 LSGPTLSRLSEAAAESGINVLSGTIVEDLAETSDVATPADEGLANTAVLFDRAGERRAVY 119 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIV----FRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +L Y E E + G DP+ +GI C D+ + + + L ++G Sbjct: 120 RKHHLFGY-ESAEAELLVPG--EDPLSGVCEIEGFTVGITTCYDL-RFPELYRELVEEGV 175 Query: 169 EFLFSLNASPY 179 + +A PY Sbjct: 176 SLVLVPSAWPY 186 >gi|109947236|ref|YP_664464.1| beta-alanine synthetase [Helicobacter acinonychis str. Sheeba] gi|109714457|emb|CAJ99465.1| beta-alanine synthetase [Helicobacter acinonychis str. Sheeba] Length = 293 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I+ + K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIVGIYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|86143314|ref|ZP_01061716.1| beta-alanine synthetase [Leeuwenhoekiella blandensis MED217] gi|85830219|gb|EAQ48679.1| beta-alanine synthetase [Leeuwenhoekiella blandensis MED217] Length = 295 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 15/179 (8%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKK 60 +K IA+ QL + N+AK ++ ++A +G ++I EL+ S Y ED+ K Sbjct: 4 RKYTIAVLQL-ALNNTPENNLAKCKKWVKDAAEKGAEIICLPELYSSHYFCQDEDVDNFK 62 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLP 118 + + + + G I+V F + G+ NS I+D G + K+++P Sbjct: 63 YAEPLYDVSFNEFSALAKELGVVIIVPFFEKRMSGIYHNSAYIIDTDGAEAGLYRKMHIP 122 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIR-----LGILICEDIWKNSNICKHLKKQGAEFLF 172 + F+EK F G + F+ I+ LG LIC D W + QGAE LF Sbjct: 123 DDPHFYEKFYFTPG----DLGFKTIKTQKANLGTLICWDQWY-PEAARLTALQGAEVLF 176 >gi|115470753|ref|NP_001058975.1| Os07g0167100 [Oryza sativa Japonica Group] gi|113610511|dbj|BAF20889.1| Os07g0167100 [Oryza sativa Japonica Group] Length = 568 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 64/274 (23%) Query: 264 TMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA----------- 312 MY +EE A +C L DY++++ ++ LSGG DS+ AAI Sbjct: 155 VMYHRPEEEIAFGPSCWL--WDYLRRSRASGFLLPLSGGADSSSVAAIVGCMCQLVVKDI 212 Query: 313 --------VDA-----------------LGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 DA L K T+ + + +S + A A+ +G Sbjct: 213 ENGDEQVKADAMRIGQYKDGEFPKDSRELAKRLFYTVYMGTENSSEGTRSRAKMLAEEIG 272 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEP----------SGIVAENIQSRIRGNILMALSN- 396 + +PI +V+ SL + + P + +NIQ+RIR + +++ Sbjct: 273 SFHLDVPIDSIVSALLSLFERLTGKRPRYKVDGGSNTENLGLQNIQARIRMVLAFMMASL 332 Query: 397 ----HSKA---MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 H+K+ ++L +SN E GY T Y S NP+ + K + W H Sbjct: 333 MPWVHNKSGFYLVLGSSNVDEGLRGYLTKYDCSSADINPIGSVSKQDLRAFLRWAAVHLH 392 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 S L + E P P+AEL P + D L Sbjct: 393 YSSLAEV-EAAP-------PTAELEPIRADYNQL 418 >gi|119720138|ref|YP_920633.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermofilum pendens Hrk 5] gi|119525258|gb|ABL78630.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermofilum pendens Hrk 5] Length = 286 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 17/212 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFIS---GYPPEDLVFKKS 61 +++A+ QL V G+ N+ KA R E + L +F E + G P D V++ + Sbjct: 16 VRVALHQLA-VSGEKRENLEKALRLLELGDAY---LHVFPEYLMGVDPGGPTRDYVWRVA 71 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A ++ G A + F R+ GV N+ V+ + G + AV KI+L + Sbjct: 72 EPIDGEFASRIVEKTGELGVAAVFTMFLREGP-GVYNAAVLAEEGKVKAVYRKIHLFDAY 130 Query: 122 EFHEKRTFISGYSNDPIV--FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + E F G +P+V + +RLGI +C D+ + + + + +GAE + S + Sbjct: 131 GYRESSVFSPG--REPVVADLKGLRLGIAVCFDL-RFPELFRSMFLRGAEVF--VVPSAW 185 Query: 180 YHNKLK-KRHEIVTGQISHVHLP-IIYVNQVG 209 Y K ++ + +T +H + ++ VNQVG Sbjct: 186 YRGPYKVEQWKALTAARAHENTSYLVAVNQVG 217 >gi|319902141|ref|YP_004161869.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacteroides helcogenes P 36-108] gi|319417172|gb|ADV44283.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacteroides helcogenes P 36-108] Length = 295 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 42/274 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+K+ I Q D+ N+ ++ E G L++ EL S Y Sbjct: 1 MARKIKVGIIQ-QANTSDVRTNLMNLTQSIEACAAHGAQLVVLQELHNSLY--------- 50 Query: 61 SFIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-G 106 F Q ++ + L G +V + G+ N+ V+ ++ G Sbjct: 51 -FCQTENTQLFDLAEPIPGPSTGFYSELAAANNVVLVTSLFEKRAPGLYHNTAVVFESDG 109 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 +I K+++P+ ++EK F G +PI +LG+L+C D W + + Sbjct: 110 SIAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMSL 168 Query: 166 QGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE---- 213 +GAE L A + + K+++ + + Q H LP++ VN+VG + + Sbjct: 169 RGAEILIYPTAIGWESSDEDDEKVRQLNAWIISQRGHAVANGLPVVSVNRVGHEPDPSMQ 228 Query: 214 ---LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++F G SF Q + Q + S +N + E Sbjct: 229 TNGILFWGNSFIAGPQGEFLAQAGNNSPENIVVE 262 >gi|229826179|ref|ZP_04452248.1| hypothetical protein GCWU000182_01551 [Abiotrophia defectiva ATCC 49176] gi|229789049|gb|EEP25163.1| hypothetical protein GCWU000182_01551 [Abiotrophia defectiva ATCC 49176] Length = 290 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 53/251 (21%), Positives = 105/251 (41%), Gaps = 26/251 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED-----L 56 ++ L +A Q++ +I KA +A +G LIL ELF Y ++ Sbjct: 1 MRNLTVAAVQMS-CSTKPKESIEKAEALVLQAVNKGAKLILLPELFERQYFCQERRYDYY 59 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 F K ++ + A+ + + + F +D + N+V +LD+G + + K + Sbjct: 60 AFAKPVME--NDAVKHFLELSKKTETVLPISFYEKDGNVLYNTVAVLDSGKFLGIYRKTH 117 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + + ++G+ IC D W + L GAE L Sbjct: 118 IPDDHFYQEKFYFTPGNTGLKVWDTSVGKVGVGICWDQW-FPETARSLAINGAEVLLYPT 176 Query: 173 SLNASPYYH-NKLKKRHEIVTGQISHVHLPIIYVNQVGGQD------------ELIFDGA 219 ++ + P + + + + G + +P++ N++G ++ L F G+ Sbjct: 177 AIGSEPVLNTDSMGHWRRTMQGHSAANIIPVVAANRIGTEEVIPCEENNNQSSSLTFYGS 236 Query: 220 SFCFDGQQQLA 230 SF D L+ Sbjct: 237 SFITDMTGDLS 247 >gi|312792821|ref|YP_004025744.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179961|gb|ADQ40131.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 231 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 16/213 (7%) Query: 33 ANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 AN + +D+I F E+ ++GY E L+ + + + + + + G ++G P ++ Sbjct: 21 ANAEDVDIICFPEMALTGYNIE-LLQSQELNERVNQLLGQIIDKCREYGIVCIIGHPYKE 79 Query: 93 QEGVLN-SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILI 149 + + N + VIL G I+ DK Y EKR F SG ND +VF R G++I Sbjct: 80 ENKLFNRASVILPTGKILHY-DK----QYPTEIEKRIFSSG--NDILVFEHDQKRFGVVI 132 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN----KLKKRHEIVTGQISHVHLPIIYV 205 C D I K K + +F L A Y K+ K I + + Sbjct: 133 CRD-QNYYEIFKKYKDNDCDGVFILAAHFYNPKEARWKIDKNRAIPIARAVENQYYVFLA 191 Query: 206 NQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 N VG ++I G S DG + + SE Sbjct: 192 NAVGPHLKMISLGHSLIVDGDGCVVCEADEASE 224 >gi|316933356|ref|YP_004108338.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris DX-1] gi|315601070|gb|ADU43605.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris DX-1] Length = 557 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 9/177 (5%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++ + A Q +GD NIA A E+A RQG +LI+F E +GY + + Sbjct: 4 RRFRAAAVQTLAKLGDFDFNIALATAYVEDAVRQGAELIVFPECMDTGYLFDSAEHCREL 63 Query: 63 IQACSSA--IDTLKSDTHDGGAGIVVGFPRQD--QEGVLNSVVILDAGNIIAVRDKINLP 118 + + + L + + G I G D ++ + N+ ++ D +A Sbjct: 64 AETLTDGPFVKALAALSRKHGVYIASGITEWDPAKQKIFNTGIMFDRNGEVACHYH---K 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 + H++ F G P+V D+ ++G+LIC D + I + + QGAE + + Sbjct: 121 QFLATHDQNWFAFGERGCPVVDTDLGKIGLLICFD-GRIPEIFRSMAMQGAEVIVDM 176 >gi|317128867|ref|YP_004095149.1| NAD+ synthetase [Bacillus cellulosilyticus DSM 2522] gi|315473815|gb|ADU30418.1| NAD+ synthetase [Bacillus cellulosilyticus DSM 2522] Length = 275 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAA---IAVDALG-KENVQ-----TIMLPYKYTSP 333 ++ Y++K+ + ++G+SGG DSAL +A++ L +EN + + LPY Sbjct: 31 IKAYLKKSGLNGYVLGISGGQDSALTGKLIQLAMEELNDEENTKKYTFYAMRLPY---GV 87 Query: 334 QSLEDAAACAKALGCKYDVLPIH--DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 Q ED A A + Y L ++ V+ F + E + V N ++R R Sbjct: 88 QQDEDDAQQALSFINPYHRLTVNVKPSVDASFEQFKKATGEALTDFVKGNTKARERMKAQ 147 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ H ++ T + +E G+ T +GD + P+ L K R + Sbjct: 148 YDVAAHYGCLVAGTDHAAEAITGFYTKFGDGACDITPIFGLNK---------RQGKILLQ 198 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + K+P+A+L RP D+E+L Y +DD ++ Sbjct: 199 ALGA-----PEILYTKAPTADLEDDRPALPDEEALGVTYNQIDDYLE 240 >gi|110597751|ref|ZP_01386035.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium ferrooxidans DSM 13031] gi|110340658|gb|EAT59138.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium ferrooxidans DSM 13031] Length = 345 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 24/267 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVFKKSFIQACSSAIDT 72 D + N+A A EA +G +I ELF + Y E F +S + + Sbjct: 72 DPSANLANACLQIREAAAKGARIICLQELFTTRYFCQTEAYEPFGFAESIPGPSTLVLQE 131 Query: 73 LKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFI 130 L + +V + G+ N+ ++DA G+ + K+++P+ F+EK F Sbjct: 132 LARELE---VVLVASLFEKRARGLYHNTAAVIDADGSYLGKYRKMHIPDDPGFYEKFYFT 188 Query: 131 SGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN------K 183 G + R +G+LIC D W + +GAE +F A + + + Sbjct: 189 PGDLGYKVFKTRYATIGVLICWDQW-YPEAARLTALKGAEIIFYPTAIGWAADEESEAVR 247 Query: 184 LKKRHEIVTGQISHVHLPIIYV---NQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 ++ T Q+SH ++V N+VG + +L F G SF D Q+ + H E Sbjct: 248 RSQQAAWKTMQLSHAVANGVFVAAANRVGTEGDLEFWGNSFVCDPFGQIIEEAAHQDETI 307 Query: 241 FMTEWHYDQ---QLSQWNYMSDDSAST 264 E + S W ++ D T Sbjct: 308 LFAECDRSRIGFYRSHWPFLRDRRIET 334 >gi|332654210|ref|ZP_08419954.1| hydrolase, carbon-nitrogen family [Ruminococcaceae bacterium D16] gi|332517296|gb|EGJ46901.1| hydrolase, carbon-nitrogen family [Ruminococcaceae bacterium D16] Length = 301 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 23/193 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 + +KIA+ Q + N+ A + EA+ G D++LF E++ +GY Sbjct: 1 MPTIKIALIQKKAIPNHKDRNLELAIQYINEASGMGADIVLFPEMWSNGYAPPFDGAFDN 60 Query: 53 PEDLVFKKSFIQACSSAIDTLKSD----THDGGA----GIVVGFPRQDQEGVLNSVVILD 104 P D F+K + SA+ TL+SD D A G+ F + + + N+ VI+D Sbjct: 61 PTDPAFEKERKEWLESAV-TLESDYVAAIKDAAATYKIGVCATFLSRSDDKIQNTAVIID 119 Query: 105 -AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 +GNI+ K++ +F ++ G F I++G++IC D + + L Sbjct: 120 RSGNILLNYAKVHT---CDFSLEKLLQHGDEFKVCEFEGIQIGMMICYDR-EFPESARVL 175 Query: 164 KKQGAEFLFSLNA 176 +GAE + NA Sbjct: 176 MLKGAEIILVPNA 188 >gi|282858854|ref|ZP_06267998.1| putative N-carbamoylputrescine amidase [Prevotella bivia JCVIHMP010] gi|282588360|gb|EFB93521.1| putative N-carbamoylputrescine amidase [Prevotella bivia JCVIHMP010] Length = 295 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 64/281 (22%), Positives = 118/281 (41%), Gaps = 25/281 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + +++I + QL+ V D+ NI + ++G+ L++ EL S Y ED+ Sbjct: 1 MNEIRIGLLQLHNV-ADVETNIKHITEHVNDLAKRGVQLVVLQELHNSLYFCQVEDVNNF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINL 117 + + + G +V + G+ N+ V+ + IA + K+++ Sbjct: 60 DLAETIPGPSTELYAKLAKELGIVLVTSLFEKRAPGLYHNTAVVFEKDGTIAGKYRKMHI 119 Query: 118 PNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ ++EK F G PI +LG+L+C D W + + QGAE L A Sbjct: 120 PDDPAYYEKFYFTPGDLGFKPIQTSIGKLGVLVCWDQWY-PEAARLMAMQGAEILIYPTA 178 Query: 177 SPYYHNKLKKRHE--------IVTGQISHVHLPIIYVNQVG------GQDELI-FDGASF 221 Y + K+ + ++ G LP++ VN+VG Q E I F G+SF Sbjct: 179 IGYAKSDTKEEQQRQREAWTTVMRGHAVANGLPVVAVNRVGFEPDPSKQTEGIEFWGSSF 238 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEW---HYDQQLSQWNYMSD 259 Q ++ +Q E++ + + H + W ++ D Sbjct: 239 VAGPQGEIHYQACDNDEESVVIDIDLDHSEDVRRWWPFLRD 279 >gi|237717548|ref|ZP_04548029.1| beta-ureidopropionase [Bacteroides sp. 2_2_4] gi|229453134|gb|EEO58925.1| beta-ureidopropionase [Bacteroides sp. 2_2_4] Length = 294 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 112/273 (41%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+ I Q + DI N+ ++ E G LI+ EL S Y Sbjct: 1 MRKIKVGIIQQSNT-ADIKANLMNLAKSIEACVAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTNLFDLAEPIPGPSTGFYSELAAANKVVLVTSLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ- 211 GAE L A + + K ++ + + Q +H LP+I VN+VG GQ Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSGQT 228 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + ++F G SF Q + Q + +N + E Sbjct: 229 NGILFWGNSFVAGPQGEFLAQAGNDHPENIVVE 261 >gi|196247889|ref|ZP_03146591.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. G11MC16] gi|196212673|gb|EDY07430.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. G11MC16] Length = 271 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 15/225 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA QL+ GD N +A +A E A ++G D+I+ EL+ +GY DL Sbjct: 3 IRIACLQLDIAFGDPQKNEQQAEKAVELAVKEGADIIVLPELWTTGY---DLTRLGEIAD 59 Query: 65 ACSSAIDTLKSD-THDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 + T S G V G ++ GV N++++ + G II K++L + Sbjct: 60 DNAERAKTFASRLAQTYGIHFVAGSVAKKTDAGVTNTMIVANRNGQIIKEYSKVHL--FQ 117 Query: 122 EFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 E SG N+P +F ++ +IC DI I H GAE LF + P Sbjct: 118 LMDEHLHLQSG--NEPGLFSLDELSCAGVICYDIRFPEWIRTH-ALSGAELLFVVAEWPL 174 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 175 --PRLHHWRTLLMARAIENQCYVVACNRAGSDPNNVFAGHSLIID 217 >gi|254282658|ref|ZP_04957626.1| nitrilase, arylacetone-specific [gamma proteobacterium NOR51-B] gi|219678861|gb|EED35210.1| nitrilase, arylacetone-specific [gamma proteobacterium NOR51-B] Length = 333 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 19/163 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PEDLV 57 + +++A Q PV D+ G +AK + EEA +G DL++F E ++ GYP + Sbjct: 5 QNVRVAAVQAAPVFMDLKGTVAKTVKLIEEAAEKGCDLVVFPETWVPGYPWFIWLNTTMA 64 Query: 58 FKKSF-------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 K F + S DT+ D + VG +D + S + G+++ Sbjct: 65 NMKYFGRYNENSLVVGSDEFDTIAQAAKDNNIHVSVGASERDHGSLYISQFLFGRDGSLL 124 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFR-DI-RLGILIC 150 + R K+ P + E+ F G +D V DI R+G L C Sbjct: 125 SGRRKLK-PTH---QERTVFGDGDGSDLCVSETDIGRVGQLAC 163 >gi|312867864|ref|ZP_07728069.1| NAD+ synthase [Streptococcus parasanguinis F0405] gi|311096619|gb|EFQ54858.1| NAD+ synthase [Streptococcus parasanguinis F0405] Length = 274 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 36/258 (13%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDASYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE------EPSGIVAENIQSRIRGNIL 391 D A KAL + P LV + + ++ E S NI++R R Sbjct: 90 DEADAQKALAF---IQPDISLVVNIKESADEMVRAVEATGTEVSDFNKGNIKARSRMIAQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 AL+ ++ T + +E G+ T +GD PL L K Q QL Sbjct: 147 YALAGARSGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNKRQGKQL---------LK 197 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 LG P++ EK P+A+L +E P I D++ + NE ++ + Sbjct: 198 ALGA-----DPALYEKIPTADL------EEEKP--GIADEVALGVTYNEIDDYLEGKQVS 244 Query: 512 DETVRYVEHLLYGSEYKR 529 E +E Y ++KR Sbjct: 245 PEAQATIEKWWYKGQHKR 262 >gi|152969782|ref|YP_001334891.1| NAD synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894283|ref|YP_002919017.1| NAD synthetase [Klebsiella pneumoniae NTUH-K2044] gi|330012505|ref|ZP_08307403.1| NAD+ synthase [Klebsiella sp. MS 92-3] gi|150954631|gb|ABR76661.1| NAD(+) synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546599|dbj|BAH62950.1| NAD(+) synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328533798|gb|EGF60481.1| NAD+ synthase [Klebsiella sp. MS 92-3] Length = 275 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 48/265 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAA---IAVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L IA++ L G ++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLTGKLCQIAINELRAETGDSSLQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKAAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ +K +++ T + +E G+ T YGD NP+ L K Q QL + Sbjct: 142 RMKAQYSIAGMTKGVVVGTDHAAEAITGFFTKYGDGGTDINPIFRLNKRQGKQLLAH--- 198 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFIN 505 LG P + +K P+A+L + D+ SLP D++ + EN + ++ Sbjct: 199 ------LG-----CPEHLYKKLPTADL---EDDRPSLP-----DEVALGVTYENIDDYLE 239 Query: 506 NDQEYNDETVRYVEHLLYGSEYKRR 530 + + + +E +E+KRR Sbjct: 240 G-KTLDPSIAKTIEGWYLKTEHKRR 263 >gi|254229089|ref|ZP_04922509.1| NAD+ synthetase [Vibrio sp. Ex25] gi|262396636|ref|YP_003288489.1| NAD synthetase [Vibrio sp. Ex25] gi|151938380|gb|EDN57218.1| NAD+ synthetase [Vibrio sp. Ex25] gi|262340230|gb|ACY54024.1| NAD synthetase [Vibrio sp. Ex25] Length = 276 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 50/240 (20%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 ++ +Q+ +++G+SGG+DS +A A+ + N ++ + LPY Sbjct: 28 IKRKLQEAGCKSLVLGISGGVDSTTLGRLAQLAVEQLNAESGTDKYQFIAVRLPY---GE 84 Query: 334 QSLEDAAACAKALGCKYDVLPIH-------DLVNHFFSLMSQFLQ--------EEPSGIV 378 Q ED A A + + P H D V+ + LQ + V Sbjct: 85 QKDEDEAQLALSF-----IKPTHSVSVNIKDGVDGLHAATDTALQGTGLLPTEADKIDFV 139 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 N+++R R ++ + ++L T + +E G+ T +GD + PL L K QV Sbjct: 140 KGNVKARARMIAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVR 199 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 +LA+ + P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 200 ELAATLGA--------------PELLVKKVPTADLEELEPQKADEDALNLTYEQIDDFLE 245 >gi|77460778|ref|YP_350285.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas fluorescens Pf0-1] gi|77384781|gb|ABA76294.1| carbon-nitrogen hydrolase family protein [Pseudomonas fluorescens Pf0-1] Length = 273 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 12/254 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ +AQL D A N+ +A A LI+F E + G+P D V + + Sbjct: 1 MKVELAQLAGRDKDTAYNLERALAAMAACAAD-TQLIVFPETHLMGFPTADTVAQIAE-P 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + T+++ + +V+G D N+ +++ I K +L Sbjct: 59 LDGPTVSTVQAAARERNIAVVIGMAENDNGRYYNTTLLITPEGIALKYRKTHL----WAS 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 ++ F +G ++ +R+G+LIC DI + + L + GAE L N + + Sbjct: 115 DRGVFEAGDRYATCLWNGVRVGLLICYDI-EFPESARALAQLGAELLIVTNGNMDPYGPT 173 Query: 185 KKRHEIVTGQISHVHLPIIYVNQV-GGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 + + Q + + VN+V G D L+F G S D L F+ E F Sbjct: 174 HRTAIMARAQENQAF--ALMVNRVEAGDDGLMFAGGSALVDPLGTLLFEAGR-EEGRFSV 230 Query: 244 EWHYDQ-QLSQWNY 256 E + Q +L++ +Y Sbjct: 231 ELDFGQLELARKDY 244 >gi|28377448|ref|NP_784340.1| NAD synthetase [Lactobacillus plantarum WCFS1] gi|254555632|ref|YP_003062049.1| NAD synthetase [Lactobacillus plantarum JDM1] gi|300768793|ref|ZP_07078688.1| NAD(+) synthase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179661|ref|YP_003923789.1| NAD synthetase [Lactobacillus plantarum subsp. plantarum ST-III] gi|81632047|sp|Q88Z14|NADE_LACPL RecName: Full=NH(3)-dependent NAD(+) synthetase gi|28270280|emb|CAD63181.1| NAD synthase [Lactobacillus plantarum WCFS1] gi|254044559|gb|ACT61352.1| NAD synthetase [Lactobacillus plantarum JDM1] gi|300493620|gb|EFK28793.1| NAD(+) synthase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045152|gb|ADN97695.1| NAD synthetase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 275 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 33/229 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDAL-------GKE 319 P + E + + L+ Y+ KN F K ++G+SGG DS L + A+ G + Sbjct: 16 PTIDPEVEIRRSIDFLKAYLTKNTFLKTYVLGISGGQDSTLAGKLTEMAITEMRQETGDD 75 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPS 375 Q I + Y + DA A + + D+ P D + + + Sbjct: 76 RYQFIAVRLPYGNQADEADAMAAIDFMQADVTDRVDIQPATDAMVTALEANQLTIHDFNK 135 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 G NI++R R + ++ ++ T + +E G+ T YGD PL L K Sbjct: 136 G----NIKARQRMIVQYGIAGEMHGAVVGTDHAAEAVTGFYTKYGDGGADIVPLWRLNKR 191 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 Q Q+ + ++ P + +K P+A+L + D+ +LP Sbjct: 192 QGKQMLAALDA--------------PKHLYDKVPTADL---EEDRPALP 223 >gi|317180521|dbj|BAJ58307.1| carbon-nitrogen hydrolase [Helicobacter pylori F32] Length = 292 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 10/123 (8%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 ++VV+ G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 99 SAVVVEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW-Y 157 Query: 157 SNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQV 208 + + +GAE L +A + N+ KKR + I H LP+I N+V Sbjct: 158 PEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNRV 217 Query: 209 GGQ 211 G + Sbjct: 218 GTE 220 >gi|294495393|ref|YP_003541886.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanohalophilus mahii DSM 5219] gi|292666392|gb|ADE36241.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanohalophilus mahii DSM 5219] Length = 260 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 34/235 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A Q++ + NI +A + A G ++I+F E+F +G+ Sbjct: 2 VKVACIQMDVEHCNKKTNIERALARADRALTMGAEIIVFPEVFSTGF------------- 48 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVV-ILDA-----GNI-IAVRDKINL 117 C +D L G +V F +++ ++ S+V LDA N+ + + I Sbjct: 49 -CYEQMDKLAEKPPYPTIGQLVNFSQKNNCILIGSIVEELDAETKPYANLGFCIENGIIR 107 Query: 118 PNYSEFH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 Y + H EK F G S PI +I +G+ IC +I + + + L QGA+ L + Sbjct: 108 GTYRKIHPFGEEKSHFTPGDSIHPIKLENICIGLEICYEI-RFPEVARKLVLQGADLLVT 166 Query: 174 LNASP---YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + P H ++ V QI HV N+ G F G+S D Sbjct: 167 IAQFPDPRGNHWRILGPARAVENQIPHV-----MCNRTGKDPTKSFPGSSMIIDA 216 >gi|255009374|ref|ZP_05281500.1| putative hydrolase [Bacteroides fragilis 3_1_12] gi|313147131|ref|ZP_07809324.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135898|gb|EFR53258.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 294 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 26/265 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLV 57 ++K+K+ I Q DI N+ ++ E G L++ EL S Y DL Sbjct: 1 MRKIKVGIIQ-QANTSDIRMNLMNLAKSIEACAAHGAQLVVLQELHNSLYFCQTENTDLF 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKI 115 I S+ + + T+ +V + G+ N+ V+ D G+I K+ Sbjct: 60 ELAEPIPGPSTGFYSELAATNR--IVLVTSLFEKRAPGLYHNTAVVFDRDGSIAGKYRKM 117 Query: 116 NLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 ++P+ ++EK F G +PI +LGIL+C D W + + +GAE L Sbjct: 118 HIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGILVCWDQWY-PEAARLMALKGAEILIYP 176 Query: 175 NASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ-DELIFDGA 219 A + + K ++ + + Q +H LP+I VN+VG GQ + ++F G Sbjct: 177 TAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEADPSGQTNGILFWGN 236 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTE 244 SF Q + Q + +N + E Sbjct: 237 SFVVGPQGEYLAQAGNERPENIVVE 261 >gi|330819711|ref|YP_004348573.1| NAD+ synthetase [Burkholderia gladioli BSR3] gi|327371706|gb|AEA63061.1| NAD+ synthetase [Burkholderia gladioli BSR3] Length = 285 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 24/234 (10%) Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQTIML 326 EEA+ L+ DY++ ++G+SGG+DS+ A +AV+ L + + I + Sbjct: 28 EEAERRIGFLA--DYLRSTGLSTYVLGISGGVDSSTAGRLAQLAVERLRASGYDARFIAM 85 Query: 327 PYKYTSPQSLEDA----AACAKALGCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAEN 381 Y + EDA A A DV P D ++ + F E V N Sbjct: 86 RLPYGVQRDEEDAQRALAFVAADENLTVDVRPAADGMLAATAASGLVFRDEAQQDFVHGN 145 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 I++R R A++ + +++ T + +E +G+ T +GD PL L K +V +A Sbjct: 146 IKARERMIAQYAVAGARRGIVIGTDHAAESVMGFFTKFGDGGADILPLAGLTKRRVRAVA 205 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 G L +P + LE LRP D+ + Y +DD ++ Sbjct: 206 RH------LGGADALVMKVPTADLEA-----LRPLLPDETAYGVTYDQIDDFLE 248 >gi|308062079|gb|ADO03967.1| carbon-nitrogen hydrolase [Helicobacter pylori Cuz20] Length = 292 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 11/124 (8%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VGGQ 211 VG + Sbjct: 217 VGTE 220 >gi|241203696|ref|YP_002974792.1| NAD synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857586|gb|ACS55253.1| NAD+ synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 277 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 32/228 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-------ENVQTIMLPYKYTSPQS 335 L+DY+ + ++G+SGG+DS A +A A+ + + LPY + ++ Sbjct: 34 LKDYLVASGMRGYVLGISGGVDSLTAALLAQKAVRELRDSGHAAEFIAVRLPYGVQADEA 93 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-----FLQEEPSGIVAENIQSRIRGNI 390 DA + +G ++ +Q F + NI++R R Sbjct: 94 --DAGRALETIGADRSMVVNIKAPADAMLAAAQDGGLAFADAGRQDFILGNIKARQRMIA 151 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 AL+ ++++ T + +E +G+ T +GD + PL L K +V LA + Sbjct: 152 QFALAGALGSLVIGTDHAAEAVMGFFTKFGDGAADILPLAGLNKRRVRLLAKRLGA---- 207 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P ++ K P+A+L RP + D+E+ Y +DD ++ Sbjct: 208 ----------PDELVFKVPTADLEDQRPLRPDEEAYGVSYDEIDDFLE 245 >gi|188586226|ref|YP_001917771.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350913|gb|ACB85183.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 267 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 12/190 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++A Q+ P++ D+ GNI + + A + DLI+F EL+ +GY F+ + Sbjct: 2 FQVAAIQMTPIMNDVDGNIKRGVHLAKNAIAEEADLIVFPELWTTGYHLSRESFRALAEK 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEF 123 + T + G IV F + + + + ++D G + K L Sbjct: 62 PDGKTVSTFQEIAKQGEVSIVCPFVEEAGDKIYIAAAVIDTEGETRGIVRKSLLWG---- 117 Query: 124 HEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNAS 177 E++ F +G P + ++GILIC ++ + + L +GAE + +S++A+ Sbjct: 118 REQQIFNAGVMEYPTFDSKVGKIGILICYEM-EFPETSRLLALEGAEVIVCPSVWSMSAA 176 Query: 178 PYYHNKLKKR 187 + +L R Sbjct: 177 HRWEIQLPAR 186 >gi|302038514|ref|YP_003798836.1| putative n-carbamoyl-D-amino acid hydrolase [Candidatus Nitrospira defluvii] gi|300606578|emb|CBK42911.1| putative N-carbamoyl-D-amino acid hydrolase [Candidatus Nitrospira defluvii] Length = 263 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 19/223 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--PEDLVFKKSF 62 +++ Q +PV G++A N+ E+ DLI+ ELF +GY ++ VF+ + Sbjct: 1 MRVGYLQFDPVFGEVAHNLDLITARLEQVE---TDLIVLPELFATGYQFVSQEEVFQLAE 57 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + L G IV G P +D NS +++ I K +L Sbjct: 58 PVPDGATTKRLADIAARRGMTIVAGLPERDGGRCFNSAIVVGPKGFIGCYRKTHL----F 113 Query: 123 FHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLF--SLNAS 177 F E F G S + DI ++G++IC D W + L QGA+ + S Sbjct: 114 FEETLWFTPGDSGFHVW--DIGPAKVGVMICFD-WYYPESARTLALQGADIIAHPSNLVL 170 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 P + + R + ++ V I GG+D L F G S Sbjct: 171 PNCPDSMVTR--CLENRVFSVTANRIGSEARGGKDRLTFIGLS 211 >gi|315586574|gb|ADU40955.1| N-carbamoylputrescine amidase [Helicobacter pylori 35A] Length = 292 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 11/124 (8%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VGGQ 211 VG + Sbjct: 217 VGTE 220 >gi|304320551|ref|YP_003854194.1| hydrolase, carbon-nitrogen family [Parvularcula bermudensis HTCC2503] gi|303299453|gb|ADM09052.1| hydrolase, carbon-nitrogen family [Parvularcula bermudensis HTCC2503] Length = 281 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 57/273 (20%), Positives = 101/273 (36%), Gaps = 18/273 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M ++ +A Q P G A + A A G LIL ELF Y E+ Sbjct: 1 MTRRFTLAAVQYAP--GLAADPLGAAEAWIRRAAESGARLILLPELFAGPYFCKTQEEPH 58 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + + L + + ++ N+VV++ G K + Sbjct: 59 FRTAHPLTAHPVLARLAPLAKALNVTLPLSLFEREGPHHYNTVVVIGPDGQQKGHYRKSH 118 Query: 117 LPNYSEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ + EK F G + D G+ IC D W + + QGAEFL Sbjct: 119 IPDGPGYQEKYYFRPGNTGFRTWAVEDASFGVGICWDQW-FPEAARAMALQGAEFLLYPT 177 Query: 176 A------SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 A P ++ R + +++ +P++ VN++G ++ F G SF D + Sbjct: 178 AIGAEPQDPTLDTAMRWRRAMQGHAVANA-MPVVAVNRIGDEEGQRFYGTSFICDQSGDI 236 Query: 230 AFQMKHFSEQNFMTEWHYD---QQLSQWNYMSD 259 ++ E + D ++ + W + D Sbjct: 237 VAELGREEEGVISASFDLDALAEERAAWGFFRD 269 >gi|256828489|ref|YP_003157217.1| NAD+ synthetase [Desulfomicrobium baculatum DSM 4028] gi|256577665|gb|ACU88801.1| NAD+ synthetase [Desulfomicrobium baculatum DSM 4028] Length = 300 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 16/168 (9%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI----AVDALGKENVQTIMLPYKYTSPQSLED 338 L++Y+ + ++GLSGGIDS+ AA+ + LG LP +P+ Sbjct: 38 LQEYLNASGLKAYVMGLSGGIDSSFLAALLYHRRIPYLG------FCLPIATNTPEETAR 91 Query: 339 AAACAKALGCK---YDVLPIHDLVNHFFSLMSQFLQEEP-SGIVAE-NIQSRIRGNILMA 393 + A+A G + D + + S F P S VAE N+++R R L Sbjct: 92 GLSVARAYGNPPQGASFAHLQDFTALYQKISSTFAGICPNSTPVAEGNLKARTRMLFLYH 151 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ +L+T E+ G+ TL+GD+ G +P++ + K+ + LA Sbjct: 152 MAQIHGGCVLSTDQLDELLTGFWTLHGDV-GDVSPIQLIPKSVEYDLA 198 >gi|313123168|ref|YP_004033427.1| nh(3)-dependent nad(+) synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279731|gb|ADQ60450.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 273 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 30/255 (11%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLED 338 L+DY++ N F K ++G+SGG DS L + A+ + +T YK+ + P ++ Sbjct: 28 LKDYLKANPFLKSYVLGISGGQDSTLTGKLTQMAISEMREETGDDSYKFIAVRLPYGVQA 87 Query: 339 AAACAKALG--CKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMAL 394 AA A K DV I ++ ++++ + E + NI++R R + A+ Sbjct: 88 DAADAADAVAFIKPDVDLIENIKPATDAMVATLKETGVEVTDFNKGNIKARQRMVMQYAI 147 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + ++ ++ T + +E G+ T YGD + PL L K Q QL + LG Sbjct: 148 AGANQGAVVGTDHAAENVSGFYTKYGDGAADLTPLFRLDKRQGKQL---------LAALG 198 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET 514 P + K+P+A+L + ++ SLP D++ + E +E +++ Sbjct: 199 -----CPEHLYLKAPTADL---EEEKPSLP-----DEVALGVTYEEIDDYLEGREVSEKA 245 Query: 515 VRYVEHLLYGSEYKR 529 +E L SE+KR Sbjct: 246 AERIEELWTKSEHKR 260 >gi|300361096|ref|ZP_07057273.1| NAD(+) synthase [Lactobacillus gasseri JV-V03] gi|300353715|gb|EFJ69586.1| NAD(+) synthase [Lactobacillus gasseri JV-V03] Length = 277 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 46/263 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY+++N F K ++G+SGG DS L + A+ + +T + LPY + Sbjct: 31 LKDYLKENPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDNSYQFIAVRLPYGVQA 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQEEPSGIV---AENIQSRI 386 S A + P DL+ + M + ++ I NI++R Sbjct: 91 DASDAADAIAFQK--------PDQDLIVNIKEPVDAMVKVVEATGQKITDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ + ++ T + +E G+ T YGD + PL F+L R Sbjct: 143 RMVVQYAIAGANNGAVVGTDHAAENFSGFYTKYGDGAADLTPL--------FRLDK-RQG 193 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 + LG P + EK+P+A+L + D LP D++ + E Sbjct: 194 KALLKELG-----CPKHLYEKAPTADLEEEKPD---LP-----DEVALGVTYKEVDDYLE 240 Query: 507 DQEYNDETVRYVEHLLYGSEYKR 529 +E +D+ +E L SE+KR Sbjct: 241 GKEVSDKAAEQIEKLWKKSEHKR 263 >gi|116251100|ref|YP_766938.1| NAD synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|115255748|emb|CAK06829.1| putative NH(3)-dependent NAD(+) synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 277 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 32/228 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-------ENVQTIMLPYKYTSPQS 335 L+DY+ + ++G+SGG+DS A +A A+ + + LPY + ++ Sbjct: 34 LKDYLVASGMRGYVLGISGGVDSLTAALLAQKAVRELRDSGHAAEFIAVRLPYGVQADEA 93 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-----FLQEEPSGIVAENIQSRIRGNI 390 DA + +G ++ +Q F + NI++R R Sbjct: 94 --DAVKALETIGADRSMVVNIKAPADAMLAAAQDGGLAFADAGRQDFILGNIKARQRMIA 151 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 AL+ ++++ T + +E +G+ T +GD + PL L K +V LA + Sbjct: 152 QFALAGALGSLVIGTDHAAEAVMGFFTKFGDGAADILPLAGLNKRRVRLLAKRLGA---- 207 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P ++ K P+A+L RP + D+E+ Y +DD ++ Sbjct: 208 ----------PDELVFKVPTADLEDQRPLRPDEEAYGVSYDEIDDFLE 245 >gi|319950301|ref|ZP_08024220.1| NH(3)-dependent NAD(+) synthetase [Dietzia cinnamea P4] gi|319435993|gb|EFV91194.1| NH(3)-dependent NAD(+) synthetase [Dietzia cinnamea P4] Length = 468 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 34/236 (14%) Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA------VDALGKENVQTIM-L 326 A+ + V L DY++ + ++GLSGG+DS L +A V A G + V M L Sbjct: 22 AEVDRRVRFLVDYLRASGAKGYVLGLSGGVDSTLAGRLAQLAVEKVRAEGGDAVFVGMRL 81 Query: 327 PYKYTSPQSLEDAAACAKAL----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI 382 PY+ ++ DA A + + +V P D +N + + E + N Sbjct: 82 PYRVQHDEA--DAVAAVEFVDADEAVTVNVAPGVDALN---GEIREATGSELTDFTKGNA 136 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R R AL+ +++ + +E G+ T +GD + PL L K Sbjct: 137 KARHRMVAQYALAGDRGLLVIGADHAAENVTGFFTKFGDGAADVLPLSGLNK-------- 188 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG P + +K P+A+L QTD++ L Y +DD ++ Sbjct: 189 -RQGRALLRHLGA-----PKQLWDKVPTADLLDENEGQTDEDELGLRYDDIDDYLE 238 >gi|293607515|ref|ZP_06689850.1| N-carbamoyl-D-amino acid hydrolase [Achromobacter piechaudii ATCC 43553] gi|292814086|gb|EFF73232.1| N-carbamoyl-D-amino acid hydrolase [Achromobacter piechaudii ATCC 43553] Length = 329 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 32/184 (17%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN--IAKARRAREEANRQGMDLILFTELFISGYPP----E 54 M + + +A AQL P+ I + R E A+ +G +++F EL ++ + P E Sbjct: 1 MSRIVTVAAAQLGPIQRSEGREEVIGRMLRLLERAHHRGAQVVVFPELALTTFFPRWYCE 60 Query: 55 DLVFKKSFIQAC--SSAIDTLKSDTHDGGAGIVVGFPR----QDQEGVL------NSVVI 102 DL ++ + S A L G + +G+ D++G++ SVVI Sbjct: 61 DLDEADAWFEPSLPSPATQPLFDAIKRFGVMVYLGYAELAWEPDEQGIVRKRRFNTSVVI 120 Query: 103 LDAGNIIAVRDKINLPNYSEFH--------EKRTFISGYSNDPIVFR------DIRLGIL 148 G I+ K++LP ++E+ EKR F G P+V D LG+L Sbjct: 121 APNGEIVLKYRKVHLPGHAEYAEHRQVQHLEKRYFEVGNLGFPVVRAPVAPGVDANLGML 180 Query: 149 ICED 152 IC D Sbjct: 181 ICND 184 >gi|300812024|ref|ZP_07092476.1| NAD+ synthase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496989|gb|EFK32059.1| NAD+ synthase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|325684635|gb|EGD26790.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 276 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 30/255 (11%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLED 338 L+DY++ N F K ++G+SGG DS L + A+ + +T YK+ + P ++ Sbjct: 31 LKDYLKANPFLKSYVLGISGGQDSTLTGKLTQMAISEMREETGDDSYKFIAVRLPYGVQA 90 Query: 339 AAACAKALG--CKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMAL 394 AA A K DV I ++ ++++ + E + NI++R R + A+ Sbjct: 91 DAADAADAVAFIKPDVDLIENIKPATDAMVATLKETGVEVTDFNKGNIKARQRMVMQYAI 150 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + ++ ++ T + +E G+ T YGD + PL L K Q QL + LG Sbjct: 151 AGANQGAVVGTDHAAENVSGFYTKYGDGAADLTPLFRLDKRQGKQL---------LAALG 201 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDET 514 P + K+P+A+L + ++ SLP D++ + E +E +++ Sbjct: 202 -----CPEHLYLKAPTADL---EEEKPSLP-----DEVALGVTYEEIDDYLEGREVSEKA 248 Query: 515 VRYVEHLLYGSEYKR 529 +E L SE+KR Sbjct: 249 AERIEELWTKSEHKR 263 >gi|261839423|gb|ACX99188.1| carbon-nitrogen hydrolase [Helicobacter pylori 52] Length = 292 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 11/124 (8%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VGGQ 211 VG + Sbjct: 217 VGTE 220 >gi|116630147|ref|YP_815319.1| NAD synthetase [Lactobacillus gasseri ATCC 33323] gi|238854187|ref|ZP_04644534.1| NAD+ synthetase [Lactobacillus gasseri 202-4] gi|282851199|ref|ZP_06260564.1| NAD+ synthetase [Lactobacillus gasseri 224-1] gi|122272916|sp|Q041J1|NADE_LACGA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|116095729|gb|ABJ60881.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus gasseri ATCC 33323] gi|238833263|gb|EEQ25553.1| NAD+ synthetase [Lactobacillus gasseri 202-4] gi|282557167|gb|EFB62764.1| NAD+ synthetase [Lactobacillus gasseri 224-1] Length = 277 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 32/256 (12%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+DY+++N F K ++G+SGG DS L + A+ G ++ Q I + Y Sbjct: 31 LKDYLKENPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDDSYQFIAVRLPYGVQA 90 Query: 335 SLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DAA D ++ I D V+ ++ Q+ + NI++R R + A Sbjct: 91 DASDAADAIAFQKPDQDLIVNIKDPVDAMVKVVEATGQK-ITDFNKGNIKARQRMVVQYA 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ + ++ T + +E G+ T YGD + PL F+L R + L Sbjct: 150 IAGANNGAVVGTDHAAENFSGFYTKYGDGAADLTPL--------FRLDK-RQGKAMLKEL 200 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE 513 G P + EK+P+A+L + D LP D++ + E +E +++ Sbjct: 201 G-----CPKHLYEKAPTADLEEEKPD---LP-----DEVALGVTYKEVDDYLEGKEVSEK 247 Query: 514 TVRYVEHLLYGSEYKR 529 +E L SE+KR Sbjct: 248 AAEQIEKLWKKSEHKR 263 >gi|284046758|ref|YP_003397098.1| NAD+ synthetase [Conexibacter woesei DSM 14684] gi|283950979|gb|ADB53723.1| NAD+ synthetase [Conexibacter woesei DSM 14684] Length = 325 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 95/238 (39%), Gaps = 61/238 (25%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 SLRD V+ ++ +SGGIDS++ AA+AV ALG +VQ + LP + + + Sbjct: 24 SLRDAVRDLGRRGAVVAISGGIDSSVAAALAVKALGTRHVQCLRLPERDIGQGASDLGLE 83 Query: 342 CAKALGCK---------YDVLPIHDLVNHFFSLM---------SQFLQEEPSG------- 376 A+ALG + D L + + L+ + ++ PSG Sbjct: 84 LAEALGARSIEESITGALDGLGCYRRRDEAIRLVFPDYQPDWKHKVVRSPPSGAIITFSL 143 Query: 377 ----------------------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I A N++ R+R + ++ ++ T N E G Sbjct: 144 VVERPDGETLRAPMGAEAYRGLIAATNMKQRVRKLLEYTWADQLGYAVIGTPNLLEYDQG 203 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 + GD P+ LYKTQV+ LA LG +P SI +++P+ E Sbjct: 204 FFVKGGDGLADVKPIAGLYKTQVYALA---------RALG-----VPASITDRTPTTE 247 >gi|207092072|ref|ZP_03239859.1| carbon-nitrogen hydrolase [Helicobacter pylori HPKX_438_AG0C1] Length = 277 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 83 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 141 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 142 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 201 Query: 208 VG 209 VG Sbjct: 202 VG 203 >gi|326334014|ref|ZP_08200243.1| putative hydrolase [Nocardioidaceae bacterium Broad-1] gi|325948163|gb|EGD40274.1| putative hydrolase [Nocardioidaceae bacterium Broad-1] Length = 267 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 25/228 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 L++A+ Q V GD+A N+A A EA QG L+ E F + + P + Sbjct: 2 LRVAVVQETAVPGDVAANVATAAGRVREAAAQGARLVALPETFTTSWDLEAFDGPLPTLD 61 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINL 117 +++ +A+D + GA +V+ P + + ++V+ ++A DK +L Sbjct: 62 DTAWLAPAQAAVD-------ETGAVLVLNSPLARGGRRTITTLVVAPGEELVAAYDKQHL 114 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE-FLFSLNA 176 Y E+ F G I IR+ + +C D +N +H A+ + LN Sbjct: 115 --YPP--ERERFEPGEHGTTIEVDGIRVALSVCYD----ANFPEHAAAAAADGAILYLNT 166 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 Y+ +R + + + + VGG +LI G S +D Sbjct: 167 GAYFPGGGHRRDLHYAARALDNSMYVAFAGLVGGPLDLI--GGSAVYD 212 >gi|239782142|pdb|3HKX|A Chain A, Crystal Structure Analysis Of An Amidase From Nesterenkonia Sp Length = 283 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 12/197 (6%) Query: 29 AREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF 88 A A+ QG L+L ELF GY P + + S Q +A L+ D G +V Sbjct: 45 AAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQ-VDAARSRLRGIARDRGIALVWSL 103 Query: 89 P---RQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIR- 144 P +Q G+ + + G ++A K+ L Y EK F+ G P++ R Sbjct: 104 PGPEGPEQRGITAELAD-EHGEVLASYQKVQL--YGP-EEKAAFVPGEQPPPVLSWGGRQ 159 Query: 145 LGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIY 204 L +L+C D+ + + + +GA+ + A ++ ++ + + + Y Sbjct: 160 LSLLVCYDV-EFPEMVRAAAARGAQLVLVPTA--LAGDETSVPGILLPARAVENGITLAY 216 Query: 205 VNQVGGQDELIFDGASF 221 N G + L+FDG S Sbjct: 217 ANHCGPEGGLVFDGGSV 233 >gi|302886073|ref|XP_003041927.1| hypothetical protein NECHADRAFT_52827 [Nectria haematococca mpVI 77-13-4] gi|256722834|gb|EEU36214.1| hypothetical protein NECHADRAFT_52827 [Nectria haematococca mpVI 77-13-4] Length = 323 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 13/124 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------PEDLV 57 +K+A Q PV D+ G +AK +EA+ G ++I F E+FI GYP P D Sbjct: 8 VKVAAIQAEPVWNDLQGGVAKVISLIQEASGNGANVIGFPEVFIPGYPWSIWANSPTDNA 67 Query: 58 -----FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAV 111 + ++ ++ S +D ++ + G IV+G+ + + + + +D G I+ Sbjct: 68 PYMNEYFQNSLERESPEMDRIRDAVREAGVFIVLGYSERYKGTLYIAQSFIDETGTIVHH 127 Query: 112 RDKI 115 R KI Sbjct: 128 RRKI 131 >gi|190348315|gb|EDK40747.2| hypothetical protein PGUG_04845 [Meyerozyma guilliermondii ATCC 6260] Length = 317 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 12/133 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP------- 53 M K+K+A+ Q PV ++ + + E A +G +LI F E+F+ GYP Sbjct: 1 MGAKVKVAVVQAEPVWFNLQETVKRVNELIESAYNKGAELIAFPEVFVPGYPTWIWTNAA 60 Query: 54 ---EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNII 109 +L++ K+ + S ++ +V+GF +DQ + S I+D G I+ Sbjct: 61 DLDRNLMYTKNSLTYDSPEFISIIETVKKYPIHVVLGFSEKDQGSLYISQCIIDNTGEIV 120 Query: 110 AVRDKINLPNYSE 122 R K P + E Sbjct: 121 LKRRKFK-PTHVE 132 >gi|104773593|ref|YP_618573.1| NAD synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422674|emb|CAI97287.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 276 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 34/273 (12%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 +P + + + V L+DY++ N F K ++G+SGG DS L + A+ + +T Sbjct: 15 LPEIDPQEEIRKTVDFLKDYLKANPFLKSYVLGISGGQDSTLTGKLTQMAISEMREETGD 74 Query: 326 LPYKYTS---PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQE---EPSG 376 YK+ + P ++ AA A + P DL+ + M L+E E + Sbjct: 75 DSYKFIAVRMPYGVQADAADAADAVAF--IQPDVDLIENIKPATDAMVATLKETGVEMTD 132 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 NI++R R + A++ ++ ++ T + +E G+ T YGD + PL L K Q Sbjct: 133 FNKGNIKARQRMVMQYAIAGANQGAVVGTDHAAENFSGFYTKYGDGAADLTPLFRLDKRQ 192 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 QL + LG P + K+P+A+L + ++ SLP D++ + Sbjct: 193 GKQL---------LAALG-----CPKHLYLKAPTADL---EEEKPSLP-----DEVALGV 230 Query: 497 VENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 E +E +++ +E L SE+KR Sbjct: 231 TYEEIDDYLEGREVSEKAAERIEELWTKSEHKR 263 >gi|325183351|emb|CCA17809.1| Ncarbamoylputrescine amidase putative [Albugo laibachii Nc14] Length = 319 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 15/214 (7%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPP---EDLVFKKSFIQACSSAIDTLKSDTH 78 N+ KA A +G ++L ELF GY P F+ + A SS I + S Sbjct: 52 NVKKAESLIRIAASRGAQIVLLQELFHFGYFPIEANSANFRLATALADSSLIRAMSSLAK 111 Query: 79 DGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFI-SGYSND 136 + + V F + NS I+DA G+I+ K ++ + ++EK F S S Sbjct: 112 ELRVVLPVSFFERYLNSYYNSCAIIDADGSILGTIRKHHISDRLGYNEKYYFAPSDESFR 171 Query: 137 PIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--SPYYHNKLKKR---HEIV 191 + ++G+ I D W + + L GAE LF +A S Y + R ++ Sbjct: 172 AFETQYGQIGVAIGSDQWY-PEVSRALVIHGAEMLFFTSAMGSSLYDLRYDPRDQWQRVL 230 Query: 192 TGQISHVHLPIIYVNQVGGQD----ELIFDGASF 221 G + +P+I N+VG + ++ F G+SF Sbjct: 231 QGHAAANMVPVIASNRVGTETMDSVQVTFTGSSF 264 >gi|224005138|ref|XP_002296220.1| glutamine-dependent NAD(+) synthetase [Thalassiosira pseudonana CCMP1335] gi|209586252|gb|ACI64937.1| glutamine-dependent NAD(+) synthetase [Thalassiosira pseudonana CCMP1335] Length = 767 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 54/252 (21%), Positives = 86/252 (34%), Gaps = 37/252 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + ++ LN D GN+ + + A QG L EL I GY ED + Sbjct: 48 ITLSTCNLNQWALDFTGNLTRILASCTIAKSQGATYRLGPELEICGYGCEDHFLESDTFD 107 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C ++ L D G G P N VI ++ +R K ++ + + Sbjct: 108 HCWESLLQLLEDGATDGLMCDFGMPVLHSGVRYNCRVICYNREVLLIRPKTSMADNGNYR 167 Query: 125 EKRTFIS------GYSND------PIVFRD-------------------IRLGILICEDI 153 E R F + Y+N P F D +G CE++ Sbjct: 168 EGRYFTAYTAPSGAYANCPEKHLLPTTFYDNFGQRDAPFGLYHLQCADGTTIGCESCEEL 227 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 W L +G E + + + S + KL R +++ +Y NQ G Sbjct: 228 WTPQATHIDLALRGVEIIGNGSGSHHELRKLSTRMDLMISATRKCGGVYLYSNQRG---- 283 Query: 214 LIFDGASFCFDG 225 DG+ +DG Sbjct: 284 --CDGSRLYYDG 293 >gi|116513587|ref|YP_812493.1| NAD synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092902|gb|ABJ58055.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125230|gb|ADY84560.1| NAD-synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 276 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 34/273 (12%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 +P + + + V L+DY++ N F K ++G+SGG DS L + A+ + +T Sbjct: 15 LPEIDPQEEIRKTVDFLKDYLKANPFLKSYVLGISGGQDSTLTGKLTQMAISEMREETGD 74 Query: 326 LPYKYTS---PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQE---EPSG 376 YK+ + P ++ AA A + P DL+ + M L+E E + Sbjct: 75 DSYKFIAVRLPYGVQADAADAADAVAF--IQPDVDLIENIKPATDAMVATLKETGVEMTD 132 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 NI++R R + A++ ++ ++ T + +E G+ T YGD + PL L K Q Sbjct: 133 FNKGNIKARQRMVMQYAIAGANQGAVVGTDHAAENFSGFYTKYGDGAADLTPLFRLDKRQ 192 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 QL + LG P + K+P+A+L + ++ SLP D++ + Sbjct: 193 GKQL---------LAALG-----CPKHLYLKAPTADL---EEEKPSLP-----DEVALGV 230 Query: 497 VENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 E +E +++ +E L SE+KR Sbjct: 231 TYEEIDDYLEGREVSEKAAERIEELWTKSEHKR 263 >gi|227877004|ref|ZP_03995096.1| NAD synthetase [Lactobacillus crispatus JV-V01] gi|256844685|ref|ZP_05550170.1| NAD+ synthetase [Lactobacillus crispatus 125-2-CHN] gi|256850569|ref|ZP_05555995.1| NAD-synthetase [Lactobacillus crispatus MV-1A-US] gi|262047031|ref|ZP_06019990.1| NAD+ synthetase [Lactobacillus crispatus MV-3A-US] gi|312984392|ref|ZP_07791730.1| NAD+ synthetase [Lactobacillus crispatus CTV-05] gi|227863375|gb|EEJ70802.1| NAD synthetase [Lactobacillus crispatus JV-V01] gi|256613226|gb|EEU18430.1| NAD+ synthetase [Lactobacillus crispatus 125-2-CHN] gi|256712592|gb|EEU27587.1| NAD-synthetase [Lactobacillus crispatus MV-1A-US] gi|260572608|gb|EEX29169.1| NAD+ synthetase [Lactobacillus crispatus MV-3A-US] gi|310894213|gb|EFQ43297.1| NAD+ synthetase [Lactobacillus crispatus CTV-05] Length = 276 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 32/256 (12%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+DY++ N F K ++G+SGG DS L + A+ G ++ Q I + Y Sbjct: 31 LKDYLKANPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDDSYQFIAVRLPYGVQA 90 Query: 335 SLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +DAA D ++ I + V+ ++ Q+ + NI++R R + A Sbjct: 91 DAQDAADAVAFQKPDQDLIVNIKEPVDAMVKVVEATGQK-ITDFNKGNIKARQRMVVQYA 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ +K ++ T + +E G+ T +GD + PL F+L R + L Sbjct: 150 IAGANKGAVVGTDHAAENFSGFYTKFGDGAADLTPL--------FRLDK-RQGKALLKEL 200 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE 513 G P + EK+P+A+L +E P P D++ + E +E +D+ Sbjct: 201 G-----CPKHLYEKAPTADL------EEEKPDLP--DEVALGVTYQEIDDYLEGKEVSDK 247 Query: 514 TVRYVEHLLYGSEYKR 529 T +E L S++KR Sbjct: 248 TADQIEKLWNKSKHKR 263 >gi|313633848|gb|EFS00571.1| NAD+ synthetase [Listeria seeligeri FSL N1-067] Length = 274 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 32/237 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT-------- 323 +A+ V L+ Y+ KN F K ++G+SGG DS L IA A+ + +T Sbjct: 20 QAEIRKSVDFLKAYLTKNPFLKSFVLGISGGQDSTLAGKIAQMAISELRAETGDEEYQFF 79 Query: 324 -IMLPYKYTSPQS-LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + LPY +S +DA A + + I V+ + +S+ E S N Sbjct: 80 AVSLPYGIQLDESDRQDALAFMQP--DNRLTVNIKASVDASVAALSE-AGVELSDFAKGN 136 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++R R + A++ +K +++ T + +E G+ T YGD NPL L K Sbjct: 137 EKARERMKVQYAIAAMNKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNK------- 189 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG P + K P+A+L +P D+ +L Y +DD ++ Sbjct: 190 --RQGKALLKELG-----CPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLE 239 >gi|161507060|ref|YP_001577014.1| NAD synthetase [Lactobacillus helveticus DPC 4571] gi|160348049|gb|ABX26723.1| NAD-synthetase [Lactobacillus helveticus DPC 4571] Length = 276 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 110/256 (42%), Gaps = 32/256 (12%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+DY++ N F K ++G+SGG DS L + A+ G ++ Q I + Y Sbjct: 31 LKDYLKANPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDDSYQFIAVRLPYGVQA 90 Query: 335 SLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DAA K D ++ I + V+ ++ Q+ + NI++R R + A Sbjct: 91 DASDAADAVKFQHPDQDLIVNIKEPVDAMVKVVEASGQK-ITDFNKGNIKARQRMVVQYA 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ +K ++ T + +E G+ T +GD + PL L K R + L Sbjct: 150 IAGANKGAVVGTDHAAENFSGFYTKFGDGAADLTPLFRLDK---------RQGKMLLKEL 200 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE 513 G P + EK+P+A+L + D LP L K I + E +E +D+ Sbjct: 201 G-----CPAHLYEKAPTADLEEEKPD---LPDEVALGVTYKEIDDYLEG-----KEVSDK 247 Query: 514 TVRYVEHLLYGSEYKR 529 +E L SE+KR Sbjct: 248 AADQIEKLWKKSEHKR 263 >gi|108563167|ref|YP_627483.1| carbon-nitrogen hydrolase [Helicobacter pylori HPAG1] gi|107836940|gb|ABF84809.1| carbon-nitrogen hydrolase [Helicobacter pylori HPAG1] Length = 292 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|40890319|gb|AAR97504.1| nitrilase [uncultured organism] Length = 332 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 25/216 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 +K+ ++AI Q PV ++ ++A+A A +QG LI+F E ++ GYP Sbjct: 1 MKQTRVAIIQAEPVYLNLQASVARAIDLAGRAAKQGARLIVFGETWLPGYPAWLDYCPGM 60 Query: 53 ------PEDLVFKKS---FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-----VLN 98 P VF ++ + I+ L + G I +G + EG + N Sbjct: 61 AFWDHRPTKEVFARTRENSVVIPGKEIEQLCKTAAELGVVISIGVNEKILEGPGNGTLYN 120 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 S++++D +A + +P Y+E G + I R+G LIC + W + Sbjct: 121 SLLLIDESGKLAGHHRKLVPTYTE-RMVWGMGDGGGMEAISTAAGRVGGLICWEHWMPLS 179 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQ 194 + L G E ++ + + ++L RH G+ Sbjct: 180 R-QVLHMSGEEIHVAVWPTVHEVHQLASRHYAFEGR 214 >gi|15645376|ref|NP_207550.1| beta-alanine synthetase-like protein [Helicobacter pylori 26695] gi|2313883|gb|AAD07805.1| beta-alanine synthetase homolog [Helicobacter pylori 26695] Length = 292 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|295092121|emb|CBK78228.1| Predicted amidohydrolase [Clostridium cf. saccharolyticum K10] Length = 270 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 10/173 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q+ GD N+ K ++A Q D+I F EL GY E ++ Sbjct: 7 VKIALGQMKVFQGDTEKNLKKILDLTDQAAAQNADIICFPELAYCGYFLESEELQRLAQP 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVL-NSVVIL-DAGNIIAVRDKINLPNYS 121 + TL+ G I+ G+ + G++ NS + + D G II K+N Sbjct: 67 QDGPFVQTLREKAKSAGIHIIAGYAEAGEIPGIMYNSCIFIDDQGEIIGNMRKVNAWG-- 124 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDI-WKNSNICKHLKKQGAEFLFS 173 EK F G I + ++G+LIC D+ + + + LK GAE +F Sbjct: 125 --QEKLKFREGREFPVIQTKFGKVGMLICYDVEFPEPSRIEALK--GAEIVFC 173 >gi|217033750|ref|ZP_03439176.1| hypothetical protein HP9810_7g31 [Helicobacter pylori 98-10] gi|216943799|gb|EEC23239.1| hypothetical protein HP9810_7g31 [Helicobacter pylori 98-10] Length = 292 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|91792790|ref|YP_562441.1| NAD synthetase [Shewanella denitrificans OS217] gi|122968825|sp|Q12PA8|NADE_SHEDO RecName: Full=NH(3)-dependent NAD(+) synthetase gi|91714792|gb|ABE54718.1| NH(3)-dependent NAD(+) synthetase [Shewanella denitrificans OS217] Length = 275 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 35/220 (15%) Query: 295 VIIGLSGGIDSALCA---AIAVDALGKENVQ------TIMLPYKYTSPQSLEDAAACAKA 345 +++G+SGG+DS+L +AV++L +E + LPY + E AC Sbjct: 40 LVLGISGGVDSSLAGRLCQLAVNSLNQEKSTDSYQFIAVRLPY-HVQKDEHEAQLACQFI 98 Query: 346 LGCKYDVLPIHDLV-----NHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHS 398 K + IHD V L + L + + + N+++R+R ++ Sbjct: 99 QPSKLVTVNIHDGVVGVHNATLAGLDAAGLTHDSTKADFIKGNVKARMRMIAQYDIAGLV 158 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +++ T + +E G+ T +GD + PL L K QV QLA++ + Sbjct: 159 GGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRQLAAFLGA------------ 206 Query: 459 VIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A+L +P D+ +L Y +DD ++ Sbjct: 207 --PQVLVVKAPTADLEENKPQLEDEVALGLSYDAIDDFLE 244 >gi|90962234|ref|YP_536150.1| NAD synthetase [Lactobacillus salivarius UCC118] gi|122448725|sp|Q1WSR2|NADE_LACS1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|90821428|gb|ABE00067.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus salivarius UCC118] Length = 275 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 36/268 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTI 324 E + V L+DY++K+ F K +++G+SGG DS L ++ A+ G + Q I Sbjct: 21 EEEIRRSVDFLKDYLKKHPFLKALVLGISGGQDSTLAGKLSQMAISELREETGDDAYQFI 80 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAEN 381 + Y +DA + + V + M Q ++E E S N Sbjct: 81 AVRLPYGDQADEQDAMDAIEFMQADKTV---RVNIKQAADAMVQSIEENGLEISDFNKGN 137 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 I++R R ++ ++ T + +E G+ T YGD PL L K Q + Sbjct: 138 IKARERMIAQYGIAGAVSGAVVGTDHAAEAITGFYTKYGDGGADITPLWRLDKRQGRAML 197 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 N+ P + +K P+A+L + D+ +LP D++ + N+ Sbjct: 198 ELLNA--------------PEHLYKKVPTADL---EEDRPALP-----DEVALGVTYNDI 235 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E D +E+ +E+KR Sbjct: 236 DDYLEGKEVADNVAEKIENWFLKTEHKR 263 >gi|87124211|ref|ZP_01080060.1| possible nitrilase [Synechococcus sp. RS9917] gi|86167783|gb|EAQ69041.1| possible nitrilase [Synechococcus sp. RS9917] Length = 273 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 16/167 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFI-SGYPPEDLVFKKSFIQACSSAIDTLKSD 76 D N+A A + A R+G +L+ E F G P L + + C + T+ Sbjct: 16 DPEANLAAAEEQIDLAARRGAELVGLPENFAYMGDDPRRLELAPTLAEQCERFLVTMACR 75 Query: 77 TH----DGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI-----NLPNYSEFHEKR 127 GG + VG Q + ++ G ++A DKI +LP+ S + E Sbjct: 76 YQLAILGGGFPVPVG---DGQHTYQRAQLVGRDGQLLASYDKIHLFDVDLPDGSTYRESA 132 Query: 128 TFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLF 172 +F G+++ P+V R+G+ IC D+ + + +HL GAE L Sbjct: 133 SFSPGHNHPPVVTIPGLCRVGVSICYDL-RFPELYRHLVGDGAEVLM 178 >gi|227510737|ref|ZP_03940786.1| NAD synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189858|gb|EEI69925.1| NAD synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 277 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 38/230 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++K +F K +I+G+SGG DS L ++ A+ + +T + LPY + Sbjct: 33 LKSYLKKYDFFKSLILGISGGQDSTLAGKLSQMAVSELRDETGDNRYQFIAVRLPYGVQA 92 Query: 333 PQSLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +S DA A K + + D+ D + + G NI++R R Sbjct: 93 DES--DALAAIKYIQADQTFRVDIQSAVDAAVESVEANDVNVSDFNKG----NIKARQRM 146 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ + +++ T + +E G+ T +GD + PL L K Q QL ++ Sbjct: 147 IAQYAIAGSTNGVVVGTDHAAEAVTGFYTKFGDGAADITPLWRLDKRQGKQLLEVLDA-- 204 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + +K+P+A+L RP D+ +L Y +DD ++ Sbjct: 205 ------------PKHLYQKTPTADLEDNRPALPDEVALGVTYQDIDDYLE 242 >gi|167584066|ref|ZP_02376454.1| NAD+ synthetase [Burkholderia ubonensis Bu] Length = 284 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 32/228 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ ++G+SGG+DS+ A +AV+ L E+ + + P ++ D Sbjct: 36 LAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLAVERLRAEDYDARFIAMRL--PNGVQND 93 Query: 339 AAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 94 EADAQRALAFVRADEVLTVDVKPAADAMLASLVAGGLAFADHAQQDFVHGNIKARERMIA 153 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + +++ T + +E +G+ T +GD PL L K +V + Sbjct: 154 QYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADILPLAGLNKRRV---------RAVA 204 Query: 451 SGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 LG +I+ K P+A ELRP + D+ + Y +DD ++ Sbjct: 205 RALGG-----EETIVMKVPTADLEELRPLRPDEHAYGVSYDEIDDFLE 247 >gi|332158902|ref|YP_004424181.1| hydrolase related protein [Pyrococcus sp. NA2] gi|331034365|gb|AEC52177.1| hydrolase related protein [Pyrococcus sp. NA2] Length = 262 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 14/173 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K+A Q+ P + + N +KA + EA ++G L++ ELF +GY E+ VF+ + Sbjct: 2 VKVAYVQMEPRILEPDRNYSKAEKLIREAKKEGAKLVVLPELFDTGYNFENREEVFEVAQ 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 L + IV G +D + NS V++ G I KI+L Sbjct: 62 KIPEGETTTFLMDVARELEIFIVAGTAERDGNYLYNSAVVVGPGGYIGKYRKIHL----- 116 Query: 123 FHEKRTFIS----GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+ ++ F G+ + F ++G++IC D W + L +GAE + Sbjct: 117 FYREKFFFEPGDMGFKVFDLGF--AKVGVMICFD-WFFPESARTLALKGAEII 166 >gi|227891240|ref|ZP_04009045.1| NAD synthetase [Lactobacillus salivarius ATCC 11741] gi|227867114|gb|EEJ74535.1| NAD synthetase [Lactobacillus salivarius ATCC 11741] Length = 294 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 109/268 (40%), Gaps = 36/268 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDAL----GKENVQTI 324 E + V L+DY++K+ F K +++G+SGG DS L + IA+ L G + Q I Sbjct: 40 EEEIRRSVDFLKDYLKKHPFLKALVLGISGGQDSTLAGKLSQIAISELREETGDDVYQFI 99 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAEN 381 + Y +DA + + V + M Q ++E E S N Sbjct: 100 AVRLPYGDQADEQDAMDAIEFMQADKTV---RVNIKQAADAMVQSIEENGLEISDFNKGN 156 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 I++R R ++ ++ T + +E G+ T YGD PL L K Q + Sbjct: 157 IKARERMIAQYGIAGAVSGAVVGTDHAAEAITGFYTKYGDGGADITPLWRLDKRQGRAML 216 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 N+ P + +K P+A+L + D+ +LP D++ + N+ Sbjct: 217 ELLNA--------------PEHLYKKVPTADL---EEDRPALP-----DEVALGVTYNDI 254 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E D +E+ +E+KR Sbjct: 255 DDYLEGKEVADNVAEKIENWFLKTEHKR 282 >gi|54292971|ref|YP_125386.1| hypothetical protein lpl0007 [Legionella pneumophila str. Lens] gi|53752803|emb|CAH14237.1| hypothetical protein lpl0007 [Legionella pneumophila str. Lens] gi|307608757|emb|CBW98140.1| hypothetical protein LPW_00061 [Legionella pneumophila 130b] Length = 281 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 11/138 (7%) Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPI-VFRDIRLGILIC 150 ++ G +V G +IAV K ++P+ ++HE F G SN P+ LG+ C Sbjct: 93 EKAGYNTAVAFNPQGELIAVTRKQHIPSGEKYHENFYFKPGDSNYPVHTIAGHHLGLPTC 152 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNA------SPYYHNK-LKKRHEIVTGQISHVHLPII 203 D W + + +GAE L A +P + ++ + ++ + G +S+ II Sbjct: 153 YDQW-FPELSRIYGLKGAEILVYPTAIGGEPTAPGFDSQPMWQKVMVAQGIMSNTF--II 209 Query: 204 YVNQVGGQDELIFDGASF 221 VN++G +D+L F G+SF Sbjct: 210 AVNRIGCEDDLSFYGSSF 227 >gi|301310147|ref|ZP_07216086.1| hydrolase, carbon-nitrogen family [Bacteroides sp. 20_3] gi|300831721|gb|EFK62352.1| hydrolase, carbon-nitrogen family [Bacteroides sp. 20_3] Length = 291 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 21/232 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKS 75 D A NI K + +A R+G +L++ EL Y ED + + + Sbjct: 13 DRAANIEKLKVNIRKAAREGAELVVLQELHNGLYFCQTEDTSMFDLAETIPGPSTEIFGA 72 Query: 76 DTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG- 132 + G +V+ + G+ N+ V+L+ IA + K+++P+ ++EK F G Sbjct: 73 LAKELGIVLVLSLFEKRAPGLYHNTAVVLEKDGTIAGKYRKMHIPDDPAYYEKFYFTPGD 132 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASPYYHNKLKKR 187 +PI RLG+L+C D W + + +GAE L +S K ++ Sbjct: 133 LGFEPIDTSVGRLGVLVCWDQWY-PEAARLMAMRGAEMLIYPTAIGWESSDTQEEKDRQL 191 Query: 188 HEIVTGQISHV---HLPIIYVNQVG------GQDELI-FDGASFCFDGQQQL 229 VT Q H LP+I VN+ G GQ I F G SF Q +L Sbjct: 192 GAWVTIQRGHAVANGLPVISVNRTGHEPDPSGQTGGIRFWGNSFVAGPQGEL 243 >gi|188527400|ref|YP_001910087.1| carbon-nitrogen hydrolase [Helicobacter pylori Shi470] gi|188143640|gb|ACD48057.1| carbon-nitrogen hydrolase [Helicobacter pylori Shi470] gi|261838010|gb|ACX97776.1| carbon-nitrogen hydrolase [Helicobacter pylori 51] gi|308063457|gb|ADO05344.1| carbon-nitrogen hydrolase [Helicobacter pylori Sat464] gi|332673440|gb|AEE70257.1| para-aminobenzoate synthase [Helicobacter pylori 83] Length = 292 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|317178885|dbj|BAJ56673.1| carbon-nitrogen hydrolase [Helicobacter pylori F30] Length = 292 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|297379953|gb|ADI34840.1| N-carbamoylputrescine amidase [Helicobacter pylori v225d] Length = 293 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLKEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|210134960|ref|YP_002301399.1| carbon-nitrogen hydrolase [Helicobacter pylori P12] gi|210132928|gb|ACJ07919.1| carbon-nitrogen hydrolase [Helicobacter pylori P12] Length = 292 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|317182068|dbj|BAJ59852.1| carbon-nitrogen hydrolase [Helicobacter pylori F57] Length = 292 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|222151891|ref|YP_002561051.1| NAD synthetase [Macrococcus caseolyticus JCSC5402] gi|222121020|dbj|BAH18355.1| NAD synthetase [Macrococcus caseolyticus JCSC5402] Length = 272 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 35/224 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKEN---VQTIMLPYKY-TSPQ 334 ++ YVQ+ F K +++G+SGG DS LC + AVD L E + LPY Q Sbjct: 29 IKSYVQQYPFIKSLVLGISGGQDSTLCGKLCQMAVDELKSERDIEFIAVRLPYGVQKDEQ 88 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ---FLQEEPSGIVAENIQSRIRGNIL 391 EDA A + K + I V+ + + L + G N ++R R Sbjct: 89 DCEDAIAFIQP--DKVITINIKKAVDASIETLKRAEITLTDFQKG----NEKARERMKAQ 142 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ ++ +++ T + +E G+ T +GD PL L K R I Sbjct: 143 YSIAAATEGIVIGTDHAAESITGFYTKFGDGGADIFPLAGLNK---------RQGKAILK 193 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDD 491 LG P + EK+P+A+L +P D+ +L Y +DD Sbjct: 194 YLG-----CPAHLYEKAPTADLEEDKPQLPDEVALGVTYEAIDD 232 >gi|228922787|ref|ZP_04086085.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836842|gb|EEM82185.1| Carbon-nitrogen hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 252 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 23/222 (10%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAID 71 ++ V GD+ NI A+ EA ++ D+I+ EL+ +GY DL A ++ Sbjct: 1 MDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGY---DLTRLSEI--ADRDGLE 55 Query: 72 T---LKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEK 126 T LK + G IV G +Q ++GV N++ +++ G ++ K++L + E Sbjct: 56 TKEKLKEWSKQYGVHIVGGSIAKQTEQGVTNTMYVVNKEGELVNEYSKVHL--FQLMDEH 113 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDI----WKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + I+G D+ IC DI W + K GA+ LF + P Sbjct: 114 KYLIAGNGTGEFKLDDVECAGTICYDIRFPEWMRVHTVK-----GAKVLFVVAEWPLV-- 166 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 167 RLAHWRLLLQARAVENQCYVVACNRAGKDPNNVFAGHSLIVD 208 >gi|145254465|ref|XP_001398633.1| cyanide hydratase [Aspergillus niger CBS 513.88] gi|134084214|emb|CAK47246.1| unnamed protein product [Aspergillus niger] Length = 328 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 12/133 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PE 54 ML ++++A+ Q PV D+ + K EA G L+ F E +I GYP P Sbjct: 1 MLSQVRVAVTQAEPVWLDLEATVKKTCDLIAEAAANGAQLVTFPECWIPGYPAWIWARPV 60 Query: 55 DLVFKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNII 109 D+ +IQ S + +++ + +V+GF + ++ +I G I+ Sbjct: 61 DMRLSSIYIQNSLKIDSPQMASIQQCAAENKIVVVLGFSENLHNSLYISQAIIASDGKIL 120 Query: 110 AVRDKINLPNYSE 122 R KI P + E Sbjct: 121 TTRKKIK-PTHME 132 >gi|152984216|ref|YP_001348577.1| hypothetical protein PSPA7_3217 [Pseudomonas aeruginosa PA7] gi|150959374|gb|ABR81399.1| hypothetical protein PSPA7_3217 [Pseudomonas aeruginosa PA7] Length = 270 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 7/155 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ +A Q+ P +G+ N+ +A EA R+G ++++ EL SGY D + Sbjct: 1 MSRVTVACCQIAPRIGEHEFNLRLVEQAIREAARRGANVVVLPELATSGYVFADRREALA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + L S +VVG R D+ V NS ++DA + A+ K +L N Sbjct: 61 LAETREGPSLALWSALAGELDLVVVGGFCERLDEGRVANSAALVDADGVRALYRKAHLWN 120 Query: 120 YSEFHEKRTFISGYSNDPIVF-RDIRLGILICEDI 153 E F +G + PIV R R+ +++C D+ Sbjct: 121 ----EEGAIFEAGDQSPPIVATRFGRIAVMVCYDL 151 >gi|153806331|ref|ZP_01958999.1| hypothetical protein BACCAC_00590 [Bacteroides caccae ATCC 43185] gi|149131008|gb|EDM22214.1| hypothetical protein BACCAC_00590 [Bacteroides caccae ATCC 43185] Length = 294 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 18/164 (10%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D G+I K+++P+ ++EK F G +PI +LG+L+C D W Sbjct: 99 NTAVVFDRDGSIAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY 158 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GAE L A + + K ++ + + Q +H LP+I VN+ Sbjct: 159 -PEAARLMALKGAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNR 217 Query: 208 VG------GQ-DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 VG GQ + ++F G SF Q + Q + +N + E Sbjct: 218 VGHEPDSSGQTNGILFWGNSFVVGPQGEFLAQAGNDRPENMVVE 261 >gi|27367942|ref|NP_763469.1| NAD synthetase [Vibrio vulnificus CMCP6] gi|38502996|sp|Q8D3T7|NADE_VIBVU RecName: Full=NH(3)-dependent NAD(+) synthetase gi|27359515|gb|AAO08459.1| NAD synthetase [Vibrio vulnificus CMCP6] Length = 276 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKEN------VQTIMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS C A +AVD L +E+ + LPY Q E+ A A Sbjct: 40 LVLGISGGVDSTTCGRLAQVAVDQLNQESNSNDYQFVAVRLPY---GEQKDEEEAQLALS 96 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H +H + + ++ + + V N+++R R + Sbjct: 97 FIQPTHSVSVNIKAGVDGLH-AASHIALEGTGLIPQDAAKVDFVKGNVKARARMVAQYEI 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV +A + Sbjct: 156 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVRLVAETLGA-------- 207 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 208 ------PELLVKKVPTADLEELAPQKADEDALNLTYEQIDDFLE 245 >gi|330958758|gb|EGH59018.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 253 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 20/224 (8%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF--IQ 64 +A AQ + G++ N+A + A QG D +LF EL ++GY P DL + + Sbjct: 10 LAAAQFCSIRGELKHNLAGHLTFMQRAADQGADYLLFPELSLTGYEP-DLALELALDPRD 68 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKINLPNYSE 122 AC I L +G P + +G + ++ G++IA + P Sbjct: 69 ACLEPIRALAVQLQ---LVTTLGVPLKGADGSIKIGALTFTTEGDVIAYAKQYLHPG--- 122 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP--YY 180 E F +G + + R+G+ +C D ++ + + S+ SP Y Sbjct: 123 --EDSVFSAGREDGYLKLGAHRIGLCVCADFSHPEHVQRIADGDAWLYAASVLISPVGYE 180 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 H+ E++ G LP++ N G G S +D Sbjct: 181 HDA-----ELLAGHARRHSLPVLMANHGGPTGGWASAGRSGLWD 219 >gi|26990551|ref|NP_745976.1| carbon-nitrogen hydrolase family protein [Pseudomonas putida KT2440] gi|24985530|gb|AAN69440.1|AE016579_11 carbon-nitrogen hydrolase family protein [Pseudomonas putida KT2440] Length = 271 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 12/222 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + QL+ GD A N+ + +A DL++F E + G+ + + + Sbjct: 1 MKIELVQLSGRDGDTAYNLERTLQAIATCAVD-TDLLIFPETQLMGFASAQQLAEIAE-P 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL-PNYSEF 123 ++ ++ H+ V+G D V N+ +++ I K +L P+ Sbjct: 59 VNGPSVQAVQRAVHERNVSAVIGLAENDSGTVYNTSLLVTPQGIALSYRKTHLWPS---- 114 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+ F G +++ IR+GILIC DI + + L + GAE + N + + Sbjct: 115 -ERGLFQQGDRYVTALWKGIRVGILICYDI-EFPESARALGQLGAELILVTNGNMDPYGP 172 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDE-LIFDGASFCFD 224 + + + Q + + VN+VG DE L+F G S D Sbjct: 173 VHRTAIMARAQENQAF--AVMVNRVGDGDEGLVFAGGSAAVD 212 >gi|296110727|ref|YP_003621108.1| hypothetical protein LKI_02985 [Leuconostoc kimchii IMSNU 11154] gi|295832258|gb|ADG40139.1| hypothetical protein LKI_02985 [Leuconostoc kimchii IMSNU 11154] Length = 263 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 48/223 (21%), Positives = 94/223 (42%), Gaps = 8/223 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-VFKKSF 62 KLKI IAQ++ +G+ N ++A + G+D++L+ E++ +GY +L Sbjct: 2 KLKIGIAQVDIFLGNPQANQQTIIDYAQKAGQMGVDVLLYPEMWQTGYALTELDRLADQH 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 + + L H G V R Q N++ + D G ++ DK++L + Sbjct: 62 GDESQALLSQLAKRHHMNIVGGSVATQRDHQ--FYNTMFVFDRYGQKVSEYDKVHL--FG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 +E++ +G ++ + +IC DI + + K E LF P Sbjct: 118 LMNEEKYIAAGNHSNVFNLDGVPSAGVICYDIRFPEWVRTMMAKGPQELLFVTAEWP--E 175 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++ + ++ + ++ N+VG D+ +F G S D Sbjct: 176 QRIAQWQTLLQARAIENQAFVVAANRVGYDDDNVFGGRSLVID 218 >gi|225849382|ref|YP_002729546.1| N-carbamoylputrescine amidase [Sulfurihydrogenibium azorense Az-Fu1] gi|225644603|gb|ACN99653.1| N-carbamoylputrescine amidase [Sulfurihydrogenibium azorense Az-Fu1] Length = 295 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 27/266 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + K+ + + Q+ D+ N K + + G +++ ELF S Y ED + Sbjct: 1 MDKVNVGLIQMR-CSDDLNENFEKTVEKIKSLAKSGANIVSTQELFKSKYFCQVEDWEYF 59 Query: 60 K--SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKI 115 K + S I TL+ D IV + +G+ N+ V++DA G + K+ Sbjct: 60 KLAEVVNEDSPTIKTLQKVAKDNNVVIVASLFEKRTDGIYHNTAVVIDADGKYLGKYRKM 119 Query: 116 NLPNYSEFHEKRTFIS---GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 ++P+ F+EK F GY + DI G+LIC D W + GA+ +F Sbjct: 120 HIPDDPHFYEKFYFTPGDLGYKTFKTKYADI--GVLICWDQW-YPEAARLTALSGAKIIF 176 Query: 173 ---SLNASPYYHNKLKKRHEIVTGQISHVH-----LPIIYVNQVG------GQDELIFDG 218 ++ P + K+ + H ++ VN+VG G + + F G Sbjct: 177 YPTAIGWLPSEKEQFGKQQYNAWETVQRGHAVANGCYVVAVNRVGFEASPDGNEGIEFWG 236 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTE 244 SF D +L + E+ + E Sbjct: 237 QSFVSDPYGELLLKASIDKEEELICE 262 >gi|242218500|ref|XP_002475040.1| predicted protein [Postia placenta Mad-698-R] gi|220725813|gb|EED79785.1| predicted protein [Postia placenta Mad-698-R] Length = 327 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 50/236 (21%), Positives = 92/236 (38%), Gaps = 26/236 (11%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAID 71 LN D GN+ + + + A +G L + EL ++GY +D + + Sbjct: 2 LNQWSLDFQGNLERILASIQIAKERGATLRVGPELEVTGYGCQDHFLEGDTCLHSWEVLA 61 Query: 72 TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF-- 129 + G +G P + + N V++ +G I+ +R K+ L N + E R F Sbjct: 62 KILESEDTQGILCDIGMPVMHKNVIYNCRVVIYSGKILLIRPKMWLANDGNYRELRWFTP 121 Query: 130 ------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSNICKHLKKQ 166 ++G + P + D +GI +CE+++ S+ + Sbjct: 122 WMKHRYTEDHYLPRIIHAVTGQTKVPFGDAVVSTVDTCIGIELCEELFTPSSPHILMGLD 181 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASF 221 G E + + S + KL R E++ + +Y NQ G D L +DG + Sbjct: 182 GVEIFTNSSGSHHELRKLYTRVELIKEATLKLGGIYLYANQQGCDGDRLYYDGCAM 237 >gi|146302625|ref|YP_001197216.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Flavobacterium johnsoniae UW101] gi|146157043|gb|ABQ07897.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Flavobacterium johnsoniae UW101] Length = 245 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 17/191 (8%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A AQ P G+IA N+ + E A + G LI F E+ I+GY E+ + +F + Sbjct: 3 LAAAQTKPKRGNIASNLLDHYKLIELAAQNGAQLIAFPEMSITGYEREN-ALELAFAED- 60 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 ID LK D I+ G P +L + II+ D +++ HE Sbjct: 61 DYRIDHLKDLATDNNIIIIAGAP------ILIENQLFIGEFIISPNDSVSIYTKQFLHEG 114 Query: 127 RT--FISGYSNDP-IVFRDIRLGILICEDIWKNSNICKHLKKQG-----AEFLFSLNASP 178 F S + N+P I D + IC DI N ++ +K A FS N P Sbjct: 115 EDEFFQSSFDNNPMITIEDQNISFAICADI-DNPKHPENAEKNNVDIYIASIFFSPNGIP 173 Query: 179 YYHNKLKKRHE 189 + LK E Sbjct: 174 NAYRDLKHYAE 184 >gi|209548440|ref|YP_002280357.1| NAD synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534196|gb|ACI54131.1| NAD+ synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 277 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 32/228 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-------ENVQTIMLPYKYTSPQS 335 L+DY+ + ++G+SGG+DS A IA A+ + + LPY + ++ Sbjct: 34 LKDYLVASGMRGYVLGISGGVDSLTAALIAQKAVRELRESGHAAEFIAVRLPYDVQADEA 93 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-----FLQEEPSGIVAENIQSRIRGNI 390 DA +G ++ +Q F + NI++R R Sbjct: 94 --DAERALATIGADRAMVVNIKAAADAMLAAAQNGGLAFADAGRQDFILGNIKARQRMIA 151 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 AL+ ++++ T + +E +G+ T +GD + PL L K +V LA + Sbjct: 152 QFALAGALGSLVIGTDHAAEAVMGFFTKFGDGAADILPLAGLNKRRVRLLAKRLGA---- 207 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P ++ K P+A+L RP + D+E+ Y +DD ++ Sbjct: 208 ----------PDELVFKVPTADLEDQRPLRPDEEAYGVSYDEIDDFLE 245 >gi|227522432|ref|ZP_03952481.1| NAD synthetase [Lactobacillus hilgardii ATCC 8290] gi|227090384|gb|EEI25696.1| NAD synthetase [Lactobacillus hilgardii ATCC 8290] Length = 277 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 38/230 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++K +F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 33 LKSYLKKYDFFKSLVLGISGGQDSTLAGKLSQMAVSELRDETGDNRYQFIAVRLPYGVQA 92 Query: 333 PQSLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +S DA A K + + D+ D + + G NI++R R Sbjct: 93 DES--DALAAIKYIQADQTFRVDIQSAVDAAVESVEANDVNVSDFNKG----NIKARQRM 146 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ + +++ T + +E G+ T +GD + PL L K Q QL ++ Sbjct: 147 IAQYAIAGSTNGVVVGTDHAAEAVTGFYTKFGDGAADITPLWRLDKRQEKQLLEVLDA-- 204 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + +K+P+A+L RP D+ +L Y +DD ++ Sbjct: 205 ------------PKHLYQKTPTADLEDNRPALPDEVALGVTYQDIDDYLE 242 >gi|47093802|ref|ZP_00231549.1| hydrolase, carbon-nitrogen family [Listeria monocytogenes str. 4b H7858] gi|47017827|gb|EAL08613.1| hydrolase, carbon-nitrogen family [Listeria monocytogenes str. 4b H7858] Length = 296 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 30/209 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +KIA+ Q V + N+ A + +EA+ +G DL+LF E++ +GY P F+ + Sbjct: 1 MNTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPEMWSNGYAPP---FEDA 57 Query: 62 FIQACSSAID-------------------TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVI 102 F ++ D TLK + GI + + ++ N+ +I Sbjct: 58 FNHPLATDFDNERTKWLNEAITEDSAYFLTLKELAKELKIGICATYLSKTEQKPQNTAII 117 Query: 103 LD-AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICK 161 +D G II K++ +F + SG F I+LG +IC D + + Sbjct: 118 IDRKGEIILDYAKVHT---CDFSLEILLQSGEEFKVCEFDGIKLGGMICYDR-EFPESAR 173 Query: 162 HLKKQGAEFLFSLNA---SPYYHNKLKKR 187 L +GAE + NA +P N+L R Sbjct: 174 VLMLKGAEIILVPNACDMNPARLNQLNSR 202 >gi|327192619|gb|EGE59562.1| putative NH(3)-dependent NAD(+)synthetase protein [Rhizobium etli CNPAF512] Length = 277 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 44/234 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQ--TIMLPYKYTSPQS 335 L+DY+ + ++G+SGG+DS A +A A+ G + + LPY + Sbjct: 34 LKDYLVGSGMRGYVLGISGGVDSLTAALLAQKAVRELRDGGHAAEFIAVRLPYGVQA--- 90 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-----------ENIQS 384 D A KAL + P +V + + L G +A NI++ Sbjct: 91 --DEADAVKALAT---IDPDRSMVVNIKAAADAMLAAAQDGGLAFADAGRQDFILGNIKA 145 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R R AL+ +++ T + +E +G+ T +GD + PL L K +V LA Sbjct: 146 RQRMIAQFALAGALGGLVIGTDHAAEAVMGFFTKFGDGAADILPLAGLNKRRVRLLAKRL 205 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + P ++ K P+A+L RP + D+E+ Y +DD ++ Sbjct: 206 GA--------------PDELIFKVPTADLEDQRPLRPDEEAYGVSYDEIDDFLE 245 >gi|227545141|ref|ZP_03975190.1| cyanide hydratase [Lactobacillus reuteri CF48-3A] gi|300909186|ref|ZP_07126647.1| carbon-nitrogen family hydrolase [Lactobacillus reuteri SD2112] gi|227184873|gb|EEI64944.1| cyanide hydratase [Lactobacillus reuteri CF48-3A] gi|300893051|gb|EFK86410.1| carbon-nitrogen family hydrolase [Lactobacillus reuteri SD2112] Length = 266 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 19/228 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV------ 57 K KIA+AQL+ +G+ A N KA++A EEA D+++ E++ +GY + L Sbjct: 7 KRKIALAQLDIQLGNPAENYQKAKQAIEEAASHHADIVVLPEMWNTGYALDQLSDLADEN 66 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKIN 116 +K+ A++ L + G + G + N+ + D GN+I+ +K++ Sbjct: 67 GQKTQKFLSELALENL-INIVGGSVAVRCG------QSFFNTTYVYDQKGNLISSYEKVH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 L + +E R +G + + IC D+ + + + + G + L+ + Sbjct: 120 L--FGLMNEDRYLKAGQKENHFELAGVPSASFICYDL-RFPEWIRTVARYGTDILYF--S 174 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + ++K+ ++ + ++ VN+VG E F+G S D Sbjct: 175 AEWPSKRIKQWKIMLQSRAIENQAFVVAVNRVGTDLENSFNGHSLVID 222 >gi|126663221|ref|ZP_01734219.1| putative NH(3)-dependent NAD+ synthetase NadE [Flavobacteria bacterium BAL38] gi|126624879|gb|EAZ95569.1| putative NH(3)-dependent NAD+ synthetase NadE [Flavobacteria bacterium BAL38] Length = 268 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 31/201 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA-- 340 L DY ++G+SGGIDSAL +++ + + T+ + +S + A Sbjct: 20 LLDYATNAKVKGFVVGISGGIDSALTSSLC----AQTGLPTLCVEMPIHQAESHVNRANE 75 Query: 341 -------ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 + + D+ PI + F S + E + N ++R+R L Sbjct: 76 HIDQLKKRFSNVFNERSDLTPIFE---SFKSQVPSSENEATLNLSLANTRARLRMTTLYY 132 Query: 394 LSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 + ++ T NK E VG+ T YGD +P+ DL K++V LA++ Sbjct: 133 FAGLHGFLVAGTGNKVEDFGVGFFTKYGDGGVDISPIADLVKSEVRLLAAYLQ------- 185 Query: 453 LGPLTEVIPPSILEKSPSAEL 473 +P SIL+ P+ L Sbjct: 186 -------VPESILKAKPTDGL 199 >gi|297183519|gb|ADI19649.1| GMP synthase, pp-ATPase domain/subunit [uncultured delta proteobacterium HF0770_45N15] Length = 624 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 70/179 (39%), Gaps = 44/179 (24%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 KV++ LSGG+DS++ A+ V ALG E V + + + E AC + LG Y Sbjct: 229 RKVLMFLSGGVDSSVAFALLVKALGTERVHGLCIDNGFMRKHESEQIMACYRKLG--YTN 286 Query: 353 LPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + D F + +S Q + + + A IQ H + + E Sbjct: 287 VEARDYSATFLTAVSGMTDPQAKRAAVGAAFIQM------------HDRFLQELDLRPEE 334 Query: 411 ISVGYGTLYGDM--SGG--------------------------FNPLKDLYKTQVFQLA 441 +G GTLY D+ SGG PLKDLYK +V Q+ Sbjct: 335 WMLGQGTLYPDIIESGGTEHANVIKSHHNRVQEVVDLMASGQVVEPLKDLYKDEVRQVG 393 >gi|271965089|ref|YP_003339285.1| NAD synthetase [Streptosporangium roseum DSM 43021] gi|270508264|gb|ACZ86542.1| NAD synthetase [Streptosporangium roseum DSM 43021] Length = 276 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 55/273 (20%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LC--AAIAVDALGKENVQTIM-LPYKYTSPQS 335 L + +++G+SGG+DS LC A V A G+E+ M LPY Q+ Sbjct: 36 LTGQLTSTGLRSLVLGISGGVDSMTAGRLCQLAVERVRAAGRESTFFAMRLPY---GAQA 92 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE----------NIQSR 385 E A A VL + D+ + + + L G+V NI++R Sbjct: 93 DEKDAQLALEFIRPDRVLTV-DVKSASDAALEALLA---GGMVFRDAHHQDFAHGNIKAR 148 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R A++ + +++ T + +E G+ T +GD + PL L K R Sbjct: 149 QRMIAQYAVAGAHEGLVVGTDHAAEAVSGFFTKFGDGAADVVPLTGLTK---------RR 199 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIKRIVENEE 501 ++ LG P +++ K+P+A+L P + D+E+L Y +DD+++ +E Sbjct: 200 VRAMSQALG-----APSALIGKTPTADLETLNPGRPDEEALGVTYDDIDDLLEGKPVDEA 254 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 +F+ + Y R EH +RQ P+ Sbjct: 255 AFVTIVRRY-----RLTEH--------KRQPPI 274 >gi|18977389|ref|NP_578746.1| hypothetical protein PF1017 [Pyrococcus furiosus DSM 3638] gi|18893074|gb|AAL81141.1| hypothetical protein PF1017 [Pyrococcus furiosus DSM 3638] Length = 262 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 14/173 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLVFKKSF 62 +K+A Q+ P + ++ N++KA + +EA ++ LI+ ELF +GY E D VF+ + Sbjct: 2 VKVAYVQMEPKILELDKNLSKAEKLVKEAAKREAKLIVLPELFDTGYNFESRDEVFEIAQ 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 L D IV G + + + NS V++ + KI+L Sbjct: 62 RIPEGETTTFLMDLAGDLEVYIVAGTAEKYNDRLYNSAVLVGPTGYLGKYRKIHL----- 116 Query: 123 FHEKRTFIS----GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+ ++ F G++ + F IR+GI+IC D W + L +GA+ + Sbjct: 117 FYREKVFFDPGDLGFNVFDLGF--IRVGIMICFD-WFFPESARTLALKGADII 166 >gi|157375544|ref|YP_001474144.1| putative carbon-nitrogen hydrolase [Shewanella sediminis HAW-EB3] gi|157317918|gb|ABV37016.1| putative carbon-nitrogen hydrolase [Shewanella sediminis HAW-EB3] Length = 319 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 16/258 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M K +K A QL+ + D+ N++ A +A +A +QG +I+ ELF + Y Sbjct: 24 MSKCVKFAAVQLS-ISWDLDSNLSNATQAITDAAQQGAQVIVLQELFAAPYFCKQQRAKY 82 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + + ID + I V + + NS+V++DA G I+ K + Sbjct: 83 FELAAEREKHPLIDKMSQLAESLKVVIPVSYFEKSGNTFFNSMVMIDADGRILDNYRKSH 142 Query: 117 LPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + R G IC D W + + L GAE +F Sbjct: 143 IPDGPGYCEKYYFSPGDTGFKVWQTRYGCFGAGICWDQW-FPELARSLTLAGAEAIFYPT 201 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFDGQ 226 ++ + P + + H + G + +P+I N+ G + E F G+SF D Sbjct: 202 AIGSEPQDLSLDSRGHWQRTMQGHAAANLIPVIAANRTGVETDDGLETHFYGSSFITDHT 261 Query: 227 QQLAFQMKHFSEQNFMTE 244 ++ + SE+ E Sbjct: 262 GKILAEAGRSSEEIIYAE 279 >gi|239926779|ref|ZP_04683732.1| hypothetical protein SghaA1_01010 [Streptomyces ghanaensis ATCC 14672] gi|291435108|ref|ZP_06574498.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291338003|gb|EFE64959.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 288 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 7/186 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A Q+ P VG + N + R A EEA R+G +++ EL SGY +DL S + Sbjct: 13 VTVASCQIAPRVGRVEENRHRIREAIEEAARRGASIVVLPELANSGYVFQDLEELLSVAE 72 Query: 65 ACSSA-IDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSE 122 A + + IV GF +G NS V++D I A K +L + Sbjct: 73 PLDGATVRQWEELAARLKLVIVGGFAELGSDGRAYNSAVLIDETGIRASYRKAHL---WD 129 Query: 123 FHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 + F G + P+V R+G+LIC D+ + + +GAE L P Y Sbjct: 130 GEKTWGFTPGDTRPPVVDTPHGRIGMLICYDL-EFPEWVRLAALEGAELLCGPVNWPLYP 188 Query: 182 NKLKKR 187 +R Sbjct: 189 RPEGER 194 >gi|90417171|ref|ZP_01225098.1| NH(3)-dependent NAD(+) synthetase [marine gamma proteobacterium HTCC2207] gi|90330947|gb|EAS46208.1| NH(3)-dependent NAD(+) synthetase [marine gamma proteobacterium HTCC2207] Length = 277 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 40/231 (17%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQ---------TIMLPYKYTSPQSLEDAAACAKA 345 +++G+SGG+DS+ C +A ++ + N + + LPY Q ED A A + Sbjct: 41 LVLGISGGVDSSTCGRLAQLSVEQLNAEQSCDDYQFIAVRLPYGV---QMDEDDAQVALS 97 Query: 346 ---------LGCKYDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNILMALS 395 + K IHD V H + Q E+ + N+++R R ++ Sbjct: 98 FIQPSKSLTVNIKKGADAIHDSVCHTLAENGLHPQNEDVTDFAKGNLKARARMASQYEIA 157 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 ++L T + +E G+ T +GD + PL L K QV LA LG Sbjct: 158 GILGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVRLLAKT---------LGA 208 Query: 456 LTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIKRIVENEES 502 P S++ K+P+A+L P + D++ L Y +D+ ++ ++E+ Sbjct: 209 -----PDSLVIKTPTADLECLTPQKADEQVLGLSYDEIDNFLENKTVSQEA 254 >gi|311110259|ref|ZP_07711656.1| NAD+ synthetase [Lactobacillus gasseri MV-22] gi|311065413|gb|EFQ45753.1| NAD+ synthetase [Lactobacillus gasseri MV-22] Length = 285 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 32/256 (12%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+DY+++N F K ++G+SGG DS L + A+ G ++ Q I + Y Sbjct: 31 LKDYLKENPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDDSYQFIAVRLPYGVQA 90 Query: 335 SLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DAA D ++ I D V+ ++ Q+ + NI++R R + A Sbjct: 91 DASDAADAIAFQKPDQDLIVNIKDPVDAMVKVVEATGQK-ITDFNKGNIKARQRMVVQYA 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ + ++ T + +E G+ T YGD + PL L K R + L Sbjct: 150 IAGANNGAVVGTDHAAENFSGFYTKYGDGAADLTPLFRLDK---------RQGKAMLKEL 200 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE 513 G P + EK+P+A+L + D LP D++ + E +E +++ Sbjct: 201 G-----CPKHLYEKAPTADLEEEKPD---LP-----DEVALGVTYKEVDDYLEGKEVSEK 247 Query: 514 TVRYVEHLLYGSEYKR 529 +E L SE+KR Sbjct: 248 AAEQIEKLWKKSEHKR 263 >gi|37676070|ref|NP_936466.1| NAD synthetase [Vibrio vulnificus YJ016] gi|320158213|ref|YP_004190591.1| NAD synthetase [Vibrio vulnificus MO6-24/O] gi|46396295|sp|Q7MFB0|NADE_VIBVY RecName: Full=NH(3)-dependent NAD(+) synthetase gi|37200610|dbj|BAC96436.1| NAD synthase [Vibrio vulnificus YJ016] gi|319933525|gb|ADV88388.1| NAD synthetase [Vibrio vulnificus MO6-24/O] Length = 276 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 42/224 (18%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKEN------VQTIMLPYKYTSPQSLEDAAACA-- 343 +++G+SGG+DS C A +AVD L +E+ + LPY Q E+ A A Sbjct: 40 LVLGISGGVDSTTCGRLAQVAVDQLNQESNSNDYQFVAVRLPY---GEQKDEEEAQLALS 96 Query: 344 -------KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMAL 394 ++ K V +H +H + + ++ + + V N+++R R + Sbjct: 97 FIQPTHSVSVNIKAGVDGLH-AASHVALEGTGLIPQDAAKVDFVKGNVKARARMVAQYEI 155 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + ++L T + +E G+ T +GD + PL L K QV +A + Sbjct: 156 AGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLSKRQVRLVAETLGA-------- 207 Query: 455 PLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P +++K P+A EL P + D+++L Y +DD ++ Sbjct: 208 ------PELLVKKVPTADLEELAPQKADEDALNLTYEQIDDFLE 245 >gi|146096570|ref|XP_001467851.1| NAD+ synthase [Leishmania infantum JPCM5] gi|134072217|emb|CAM70919.1| putative NAD+ synthase [Leishmania infantum JPCM5] Length = 293 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 34/254 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALG------KENVQTIMLPYKYTSPQSL 336 L DY+++ + +SGGIDSA+ A+ A+ K+NV + P ++S +L Sbjct: 36 LNDYMRRCGLKACVTSVSGGIDSAVVLAMCARAMRAHNSPIKKNV-GLCQPI-HSSDWAL 93 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR---GNILMA 393 A G V+ L +L+ + + + ++S +R G + Sbjct: 94 RRGKENIAACGATEVVVDQTALHTELVTLVEKAVGIDGGAFARGQLRSYMRTPTGFYVAQ 153 Query: 394 LSNH--SKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L + A+++ T NK E +GY GD + DL+K++VF +A Sbjct: 154 LLTQEGTPAVVMGTGNKDEDFYLGYFCKAGDGVVDVQIISDLHKSEVFLVAEV------- 206 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES----FIN 505 LG +P + +PSA+L QTD++ L PY ++ + ++ E+ F+N Sbjct: 207 --LG-----VPENTRHAAPSADLWEAQTDEDELGFPYDFVEFFTEWYLKQLETAKLEFLN 259 Query: 506 N-DQEYNDETVRYV 518 + E D+ RYV Sbjct: 260 SLSDEARDQFERYV 273 >gi|17545423|ref|NP_518825.1| hypothetical protein RSc0704 [Ralstonia solanacearum GMI1000] gi|17427715|emb|CAD14234.1| putative predicted amidohydrolase protein [Ralstonia solanacearum GMI1000] Length = 249 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 8/153 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + IA AQ GD+ GN+ + EA + + L++F EL ++GY E + + Sbjct: 1 MSQPFTIAAAQSVSAAGDVRGNVGRHLAFLHEAAARHVRLVVFPELSLTGY--ESAIAHE 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPN 119 + A + + L+ G VVG P + +GV + ++ ++ G ++ + P Sbjct: 59 VAMHANDARLAPLQDACVRNGLAAVVGAPLRFDDGVRIGALTLMPDGKVVTYTKRHLHPG 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 E F +G PI + + IC D Sbjct: 119 -----EGAVFTAGAGGPPISVDGQTIALAICAD 146 >gi|312211814|emb|CBX91898.1| similar to cyanide hydratase/nitrilase [Leptosphaeria maculans] Length = 358 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 12/129 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--------EDL 56 +K+A+ Q PV D+ + K + EA +G L+ F E++I GYP E L Sbjct: 7 VKVAVTQHEPVWFDLVATVDKTCKLIAEAASEGAQLVAFPEVWIPGYPAWIWERCADESL 66 Query: 57 VFK--KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRD 113 K K+ + S + + + G +V+GF D + L +I +G I+ R Sbjct: 67 ATKYIKNSLSYNSPEMARICAAARTAGIAVVLGFSENDHNSLYLAQCIISASGEILMKRR 126 Query: 114 KINLPNYSE 122 KI P + E Sbjct: 127 KIK-PTHME 134 >gi|302406855|ref|XP_003001263.1| aliphatic nitrilase [Verticillium albo-atrum VaMs.102] gi|261359770|gb|EEY22198.1| aliphatic nitrilase [Verticillium albo-atrum VaMs.102] Length = 290 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 25/170 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE------ 54 M KLKIA Q P D+ G + K+ +EA +QG ++I F E+FI GYP Sbjct: 1 MAPKLKIAAIQAEPAWNDLEGGVNKSIALIQEAAQQGANVIGFPEVFIPGYPWSIWAQSP 60 Query: 55 -------DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN 107 D F S ++ S + + + + GA +V+G+ + + + + +D Sbjct: 61 TDNAAFMDEYFHNSLVKD-SDEMRRICAAVKEAGAFVVLGYSERFKGTLYIAQSFIDENG 119 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPI-------VFRDIRLGILIC 150 +I + P H +R + + + F D+ +G L C Sbjct: 120 VIVHHRRKIKPT----HVERAYWGDGQGESLQTVAPSTTFPDVNIGGLNC 165 >gi|88860093|ref|ZP_01134732.1| Beta-ureidopropionase [Pseudoalteromonas tunicata D2] gi|88818087|gb|EAR27903.1| Beta-ureidopropionase [Pseudoalteromonas tunicata D2] Length = 295 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 28/252 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M K L +A+ Q + D+A N AK + +A QG L++ EL S Y E Sbjct: 1 MSKLLPVALVQHSNST-DLAHNFAKTQDGIRKAAAQGAKLVVLQELHRSLYFCQTEDTER 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-D 113 ++ S ++ L + + IV + G+ N+ V+LD+ IA + Sbjct: 60 FDLAETIPGPTSDSLGLLAKELN---VVIVSSIFEKRATGLYHNTAVVLDSDGTIAGKYR 116 Query: 114 KINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 K+++P+ F+EK F G PI +LG+L+C D W + + GAE L Sbjct: 117 KMHIPDDPGFYEKFYFTPGDLGFTPIQTSIGKLGVLVCWDQW-FPEAARLMAMAGAEILI 175 Query: 173 SLNASPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFD 217 A + + ++ V Q +H +P+I N+VG + + ++F Sbjct: 176 YPTAIGWDTTDDIDEQTRQCDAWVISQRAHAVANGVPVISCNRVGHESDPSGHSEGILFW 235 Query: 218 GASFCFDGQQQL 229 G SF Q ++ Sbjct: 236 GNSFIAGPQGEI 247 >gi|1730953|sp|P55176|YPQQ_PSEFL RecName: Full=UPF0012 hydrolase in pqqF 5'region; AltName: Full=ORF2 gi|929801|emb|CAA60729.1| unnamed protein product [Pseudomonas fluorescens] Length = 285 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 35/234 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +++A+ Q P D+AGN+ + + EA DL++ E+F+SGY Sbjct: 19 VKTMRVALYQCPPRPLDVAGNLQRLHQVAMEAT--DADLLVLPEMFLSGYN-----IGLE 71 Query: 62 FIQACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKI 115 + A + A D + + G I+ G+P + +G + N+V ++DA Sbjct: 72 AVGALAEAQDGPSAQRIAAIAQAAGTAILYGYPERSVDGQIYNAVQLIDA-------QGQ 124 Query: 116 NLPNYSEFH-----EKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAE 169 L NY + H + F +G + P+V D +LG LIC DI N + L GAE Sbjct: 125 RLCNYRKTHLFGDLDHSMFSAGEDDFPLVELDGWKLGFLICYDIEFPEN-ARRLALAGAE 183 Query: 170 FLF--SLNASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + + N PY + + R Q + Y N G ++++ + G S Sbjct: 184 LILVPTANMIPYDFVADVTIRARAFENQCY-----VAYANYCGHEEQIRYCGQS 232 >gi|322501824|emb|CBZ36906.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 293 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 34/254 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALG------KENVQTIMLPYKYTSPQSL 336 L DY+++ + +SGGIDSA+ A+ A+ K+NV + P ++S +L Sbjct: 36 LNDYMRRCGLKACVTSVSGGIDSAVVLAMCARAMRAHNSPIKKNV-GLCQPI-HSSDWAL 93 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR---GNILMA 393 A G V+ L +L+ + + + ++S +R G + Sbjct: 94 RRGKENIAACGATEVVVDQTALHTELVTLVEKAVGIDGGAFARGQLRSYMRTPTGFYVAQ 153 Query: 394 LSNH--SKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 L + A+++ T NK E +GY GD + DL+K++VF +A Sbjct: 154 LLTQEGTPAVVMGTGNKDEDFYLGYFCKAGDGVVDVQIISDLHKSEVFLVAEV------- 206 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES----FIN 505 LG +P + +PSA+L QTD++ L PY ++ + ++ E+ F+N Sbjct: 207 --LG-----VPENTRHAAPSADLWEAQTDEDELGFPYDFVEFFTEWYLKQLETAKLEFLN 259 Query: 506 N-DQEYNDETVRYV 518 + E D+ RYV Sbjct: 260 SLSDEARDQFERYV 273 >gi|308182916|ref|YP_003927043.1| beta-alanine synthetase-like protein [Helicobacter pylori PeCan4] gi|308065101|gb|ADO06993.1| beta-alanine synthetase-like protein [Helicobacter pylori PeCan4] Length = 293 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDAGNIIA-VRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + +IA V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAVVFEKDGLIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|109900264|ref|YP_663519.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudoalteromonas atlantica T6c] gi|109702545|gb|ABG42465.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudoalteromonas atlantica T6c] Length = 302 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 18/164 (10%) Query: 98 NSVVILDAG-NIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D ++ K+++P+ F+EK F G +PI +LG+L+C D W Sbjct: 107 NTAVVFDRQLGMVGKYRKMHIPDDPGFYEKFYFTPGDMGFEPIQTSVGKLGVLVCWDQWY 166 Query: 156 NSNICKHLKKQGAEFLF---SLNASPYYHNKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GA+ LF ++ P ++R I H +P++ N+ Sbjct: 167 -PEAARLMAMRGADMLFYPTAIGWDPADTVDEQQRQFGAWQTIQRSHAVANSVPVVVANR 225 Query: 208 VG-------GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 G G + + F G SF Q ++ Q SEQN M E Sbjct: 226 TGFEASPVEGDNGIQFWGQSFIAGPQGEILAQADADSEQNLMVE 269 >gi|329960001|ref|ZP_08298497.1| hydrolase, carbon-nitrogen family [Bacteroides fluxus YIT 12057] gi|328533135|gb|EGF59904.1| hydrolase, carbon-nitrogen family [Bacteroides fluxus YIT 12057] Length = 295 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 61/274 (22%), Positives = 109/274 (39%), Gaps = 42/274 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M++K+K+ I Q D+ N+ ++ E G L++ EL S Y Sbjct: 1 MMRKIKVGIVQ-QANTSDLRTNLMNLAKSIEACAAHGAQLVVLQELHNSLY--------- 50 Query: 61 SFIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-G 106 F Q ++ + L G +V + G+ N+ V+ + G Sbjct: 51 -FCQTENTQLFDLAEPIPGPSTGFYSELAAANNIVLVTSLFEKRAPGLYHNTAVVFERDG 109 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 +I K+++P+ ++EK F G +PI +LG+L+C D W + + Sbjct: 110 SIAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMAL 168 Query: 166 QGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE---- 213 +GAE L A + K ++ + + Q H LP+I VN+VG + + Sbjct: 169 KGAELLIYPTAIGWESTDTDDEKARQLNAWIISQRGHAVANGLPVISVNRVGHEPDPSMQ 228 Query: 214 ---LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++F G SF Q + Q + +N + E Sbjct: 229 TNGILFWGNSFVAGPQGEFLAQAGNDRPENIVVE 262 >gi|254779267|ref|YP_003057372.1| putative carbon-nitrogen hydrolase [Helicobacter pylori B38] gi|254001178|emb|CAX29141.1| Putative carbon-nitrogen hydrolase [Helicobacter pylori B38] Length = 292 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PI+ +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIITSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|221069809|ref|ZP_03545914.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Comamonas testosteroni KF-1] gi|220714832|gb|EED70200.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Comamonas testosteroni KF-1] Length = 271 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 19/189 (10%) Query: 7 IAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELF--ISGYPPEDLVFKKSFI 63 + IA L V G D+A N+A+AR ++A G +L++ E F + + L ++++F Sbjct: 1 MKIAALQMVSGQDVAANLAQARSLMQQAAALGAELVVLPEYFCAMGARDTDKLAYREAFG 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVG-FPRQ--DQEGVLN-SVVILDAGNIIAVRDKINLPN 119 Q D + +V G P Q D VLN S+V G +A DKI+L Sbjct: 61 QGPIQ--DFMAGAARQLQLWVVPGTLPLQAADDSHVLNTSLVYSPDGECVARYDKIHLFQ 118 Query: 120 YSEFHEKRT--FISGYSNDPIVF----RD---IRLGILICEDIWKNSNICKHLKKQGAEF 170 + E T + + P+V RD RLG+ IC D+ + + + L QGA+ Sbjct: 119 FDNGRESYTEAAVVQAGSQPVVCDIQARDGTRWRLGLSICYDL-RFPELYRALSAQGADL 177 Query: 171 LFSLNASPY 179 L +A Y Sbjct: 178 LLVPSAFTY 186 >gi|90413891|ref|ZP_01221877.1| nitrilase [Photobacterium profundum 3TCK] gi|90325075|gb|EAS41585.1| nitrilase [Photobacterium profundum 3TCK] Length = 318 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 32/176 (18%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AI Q PV+ D+ ++ KA E + G L++F E F+ GYP + Sbjct: 3 VKVAITQKPPVLLDLKSSLNKAVEIMNEVSDMGAQLVVFPEAFLPGYPSWIWRLRPGGDM 62 Query: 65 ACSSAIDT-LKSDTHDGGAG---------------IVVGFPRQDQE----GVLNSVVILD 104 A + I T L+++ D +G +V+G D E + N+VV++D Sbjct: 63 ALGNKIHTKLRNNAVDIASGGLDSICEAAAKLNLVVVIGMNEIDSEFSGSTLFNTVVVID 122 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDP---IVFRDI-RLGILICEDIWKN 156 A I R + +P E + G+ + +V + R+G LIC W+N Sbjct: 123 ANGKIVNRHRKIMPTNPE-----RMVWGFGDGSGLRVVDTSVGRIGCLIC---WEN 170 >gi|326790665|ref|YP_004308486.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium lentocellum DSM 5427] gi|326541429|gb|ADZ83288.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium lentocellum DSM 5427] Length = 667 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 30/194 (15%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE---DLVF----- 58 + + + GD A NI + + EEA+ G+++++F EL ++GY E D + Sbjct: 41 VGVVNFHSEWGDKAANIEQMKTYIEEASTHGVNILVFPELALTGYSDEEKRDGAYLNGLR 100 Query: 59 --KKSFIQACSS--AIDTLKSDTHDGGAG------IVVGFPRQD--QEGVLNSVVILDAG 106 +K +Q + ++D L S G +V G P +D + V N+ I+ Sbjct: 101 KNEKMHVQLAETVPSLDPLASSNQIAGLCEKYNMYVVYGLPERDPSNDTVYNAAAIISPS 160 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIR---LGILICEDIWKNSNICKHL 163 + KIN E T +DP V D + +GI IC D + + ++ Sbjct: 161 GVEGTYRKINP------IEPETSWCVAGSDPFVL-DTKWGPIGISICYDTYAYPELSRYY 213 Query: 164 KKQGAEFLFSLNAS 177 +G + + + AS Sbjct: 214 GAKGCKLILNPTAS 227 >gi|227513751|ref|ZP_03943800.1| NAD synthetase [Lactobacillus buchneri ATCC 11577] gi|227083070|gb|EEI18382.1| NAD synthetase [Lactobacillus buchneri ATCC 11577] Length = 277 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 38/230 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++K +F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 33 LKSYLKKYDFFKSLVLGISGGQDSTLAGKLSQMAVSELRDETGDNRYQFIAVRLPYGVQA 92 Query: 333 PQSLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +S DA A K + + D+ D + + G NI++R R Sbjct: 93 DES--DALAAIKYIQADQTFRVDIQSAVDAAVESVEANDVNVSDFNKG----NIKARQRM 146 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ + +++ T + +E G+ T +GD + PL L K Q QL ++ Sbjct: 147 IAQYAIAGSTNGVVVGTDHAAEAVTGFYTKFGDGAADITPLWRLDKRQGKQLLEVLDA-- 204 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + +K+P+A+L RP D+ +L Y +DD ++ Sbjct: 205 ------------PKHLYQKTPTADLEDNRPALPDEVALGVTYQDIDDYLE 242 >gi|330501746|ref|YP_004378615.1| amidohydrolase [Pseudomonas mendocina NK-01] gi|328916032|gb|AEB56863.1| amidohydrolase [Pseudomonas mendocina NK-01] Length = 267 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 11/178 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKS 61 +KI++AQ++P+ G+ I K +A +G LI F E ++G EDL ++ Sbjct: 1 MKISVAQIHPIAGNPTQTIEKVAETSRQAACEGSRLIAFPECLLTGGSFDSREDL--ERG 58 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ A+ L + + + G I+ GF + + + N+ ++ I+ + K +LP Sbjct: 59 AIEI--EALAPLLAVSAETGIYIIAGFYERLPDAIFNTAALIGPTGIVGLHRKRHLPFM- 115 Query: 122 EFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 ++ T P+ +I R+G+ IC +I + + + L +GA+ + A P Sbjct: 116 -IGDRFTDTPDEWTPPVFDTEIGRIGMAICYEI-RFPEVVRTLALEGADIVVLPAAWP 171 >gi|208434668|ref|YP_002266334.1| carbon-nitrogen hydrolase [Helicobacter pylori G27] gi|208432597|gb|ACI27468.1| carbon-nitrogen hydrolase [Helicobacter pylori G27] Length = 292 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PI+ +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIITSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|47094951|ref|ZP_00232564.1| NH(3)-dependent NAD+ synthetase [Listeria monocytogenes str. 1/2a F6854] gi|254898733|ref|ZP_05258657.1| NAD synthetase [Listeria monocytogenes J0161] gi|254911778|ref|ZP_05261790.1| NH(3)-dependent NAD/ synthetase [Listeria monocytogenes J2818] gi|254936104|ref|ZP_05267801.1| NH(3)-dependent NAD+ synthetase [Listeria monocytogenes F6900] gi|47016569|gb|EAL07489.1| NH(3)-dependent NAD+ synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258608694|gb|EEW21302.1| NH(3)-dependent NAD+ synthetase [Listeria monocytogenes F6900] gi|293589730|gb|EFF98064.1| NH(3)-dependent NAD/ synthetase [Listeria monocytogenes J2818] Length = 274 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++KN F K ++G+SGG DS L +A A+ + +T + LPY Sbjct: 30 LKAYLKKNTFLKSFVLGISGGQDSTLTGKLAQMAISEMRAETGDDEYQFFAVSLPYGTQL 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 +S A A + V I V+ + +++ E S N ++R R + Sbjct: 90 DESDRQDALDFMAPDNRLTV-NIKASVDASVAALAE-AGVELSDFAKGNEKARERMKVQY 147 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A++ K +++ T + +E G+ T YGD NPL L K R + Sbjct: 148 AIAAMHKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNK---------RQGKALLKE 198 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + K P+A+L +P D+ +L Y +DD ++ Sbjct: 199 LG-----CPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLE 239 >gi|126656777|ref|ZP_01727991.1| Beta-ureidopropionase [Cyanothece sp. CCY0110] gi|126621997|gb|EAZ92705.1| Beta-ureidopropionase [Cyanothece sp. CCY0110] Length = 296 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 15/222 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF 58 M + L +A+ Q + + + N+ K+ +EA +G L++ EL S Y E++ Sbjct: 1 MNQSLTVALVQQSNSI-HVEHNLQKSIEGIQEAVSKGAQLVVLQELHRSLYFCQTEEVSL 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 + ++ + G IV+ + G+ N+ V+LD G+I K++ Sbjct: 60 FDLAETIPGPSTESFGQLAQELGVVIVLSLFEKRATGIYHNTAVVLDKDGSIAGKYRKMH 119 Query: 117 LPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +P+ F+EK F G +PI RLGILIC D W + + +GA+ L Sbjct: 120 IPDDPGFYEKFYFTPGDLGFEPIDTSLGRLGILICWDQW-FPEAARLMALKGAQMLIYPT 178 Query: 176 ASPYYHNKLKKRHEIVTG-----QISHV---HLPIIYVNQVG 209 A + + + T Q SH LP+I N+VG Sbjct: 179 AIGWSDQDTPEEQQRQTDAWMMVQRSHAVCNGLPVISCNRVG 220 >gi|217032161|ref|ZP_03437660.1| hypothetical protein HPB128_186g27 [Helicobacter pylori B128] gi|298736459|ref|YP_003728985.1| hypothetical protein HPB8_964 [Helicobacter pylori B8] gi|216946151|gb|EEC24760.1| hypothetical protein HPB128_186g27 [Helicobacter pylori B128] gi|298355649|emb|CBI66521.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 292 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PI+ +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIITSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|239618500|ref|YP_002941822.1| phosphoadenosine phosphosulfate reductase [Kosmotoga olearia TBF 19.5.1] gi|239507331|gb|ACR80818.1| phosphoadenosine phosphosulfate reductase [Kosmotoga olearia TBF 19.5.1] Length = 319 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 5/68 (7%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML---PYKYTSPQSLEDAAACAKALGCK 349 +K+++ SGG DS L A +A +ALGK+NV+ I + PY Y++ LE A+ A LG + Sbjct: 20 NKLVVAFSGGEDSTLVALLAREALGKDNVKLINVCFGPYSYSA--GLEIVASLAAKLGLR 77 Query: 350 YDVLPIHD 357 + P ++ Sbjct: 78 LEFTPGYE 85 >gi|77456775|ref|YP_346280.1| NAD synthetase [Pseudomonas fluorescens Pf0-1] gi|123606163|sp|Q3KIW5|NADE_PSEPF RecName: Full=NH(3)-dependent NAD(+) synthetase gi|77380778|gb|ABA72291.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas fluorescens Pf0-1] Length = 275 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 27/226 (11%) Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-------GKENVQ 322 Q EA+ + ++D + + +++G+SGG+DS +A A+ G E + Sbjct: 22 QALEAEVARRISFIQDCLTSSGLKTLVLGISGGVDSLTAGLLAQRAMRELRERTGDEAYK 81 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VA 379 I + Y DA A + + + I V S ++ F + + V Sbjct: 82 FIAVRLPYDVQFDEHDAQASVDFIAPDERHTVNIGPAVKSLASEVAAFEGKHAVSVDFVL 141 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N ++R+R ++ + +++ T + +E +G+ T +GD + PL L K QV Sbjct: 142 GNTKARMRMVAQYTIAGATHGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRA 201 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 +A S G P S++EK P+A+L P + D+ S Sbjct: 202 IA---RSFG-----------APESLVEKVPTADLEDLSPGKPDEAS 233 >gi|308184542|ref|YP_003928675.1| putative carbon-nitrogen hydrolase [Helicobacter pylori SJM180] gi|308060462|gb|ADO02358.1| putative carbon-nitrogen hydrolase [Helicobacter pylori SJM180] Length = 292 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PI+ +LG+++C D W Sbjct: 98 NSAVVFEKNGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIITSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|154317366|ref|XP_001558003.1| hypothetical protein BC1G_03585 [Botryotinia fuckeliana B05.10] gi|150845002|gb|EDN20195.1| hypothetical protein BC1G_03585 [Botryotinia fuckeliana B05.10] Length = 512 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 2/89 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI Q +PV+GD+ N+ +A +AN Q +DL++ EL SGY + L +++ Sbjct: 1 MKIGCLQFSPVLGDVDNNLTRADAVLAKANVQDLDLLVLPELAFSGYNFKSLHHISPYLE 60 Query: 65 ACSSAIDTLKSDTH--DGGAGIVVGFPRQ 91 +S I +L + T ++VG+P + Sbjct: 61 PTTSGISSLWARTTALKYECVVIVGYPEK 89 >gi|154343187|ref|XP_001567539.1| NAD+ synthase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134064871|emb|CAM42979.1| putative NAD+ synthase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 293 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 32/253 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLE 337 L +Y+++ + +SGGIDSA+ A+ A+ E + P Y+SP +L+ Sbjct: 36 LNNYMRRCGLKACVTSVSGGIDSAVVLAMCARAMQAPKSPIEKNVGLCQPI-YSSPWALK 94 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN----ILMA 393 A G V+ +L +L+ + + + ++S +R + Sbjct: 95 RGKENIAACGATEVVIDQTNLHAELTTLIEKAVGIKGGDFARGQLRSYMRTPPGFYVAQL 154 Query: 394 LSNH-SKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 LS + A+++ T NK E +GY GD + DL+K++VF +A Sbjct: 155 LSQEGTPAIVMGTGNKDEDFYLGYFCKAGDGVVDVQIISDLHKSEVFLVAEV-------- 206 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEES----FINN 506 LG +P + +PSA+L QTD++ L PY ++ +E E+ F+ + Sbjct: 207 -LG-----VPANTRNAAPSADLWEAQTDEDELGFPYDFVELFTGWYLEQCETSKLEFLRS 260 Query: 507 -DQEYNDETVRYV 518 E +E RYV Sbjct: 261 LSNEAREEFERYV 273 >gi|307637446|gb|ADN79896.1| N-carbamoylputrescine amidase [Helicobacter pylori 908] gi|325996036|gb|ADZ51441.1| N-carbamoylputrescine amidase [Helicobacter pylori 2018] gi|325997631|gb|ADZ49839.1| N-carbamoylputrescine amidase [Helicobacter pylori 2017] Length = 293 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS ++ + G+I V K+++P+ F+EK F G +PIV +LG+++C D W Sbjct: 98 NSAIVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIVTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|330922255|ref|XP_003299767.1| hypothetical protein PTT_10826 [Pyrenophora teres f. teres 0-1] gi|311326425|gb|EFQ92125.1| hypothetical protein PTT_10826 [Pyrenophora teres f. teres 0-1] Length = 729 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 79/375 (21%), Positives = 133/375 (35%), Gaps = 69/375 (18%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A QL D GN + + A +G + + EL I+GY D + Sbjct: 1 MGRLVTLAACQLTQWALDFEGNRKRIVESIRIAKARGATMRVGPELEITGYGCLDHFLES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I + D I +G P + N I+ G +I +R K+ L N Sbjct: 61 DVYLHSWEQISIIMQDATLHDIIIDIGLPVVHRNNRFNCRAIILNGKLIMLRPKLFLAND 120 Query: 121 SEFHEKRTFI--------------------SGYSNDPI-----VFRDIRLGILICEDIWK 155 + E+R FI +G + PI D +G CE+++ Sbjct: 121 GIYREQRHFIPWLRPGHVEDYYLPQSIQKLNGCTKIPIGDCVLSTPDTCIGFETCEELFT 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DEL 214 ++ + G E + + S + KL+ R ++ +Y NQ G D + Sbjct: 181 PNSPHNAMGLNGVEIFSNSSGSHHSLRKLETRISLIKEATRKNGGIYLYSNQQGCDGDRM 240 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNF-----------MTEWHYD-----QQLSQWNYMS 258 +DG+S F + LA Q FS + + + + Q LS Y Sbjct: 241 YYDGSSMIFCNGEILA-QGSQFSLNDVEVITATVDLEEVRAYRFAPSRGLQSLSTLAYQR 299 Query: 259 DDSASTMYIPLQEEEADYNACVLSLR----------------------DYVQKNNFHKVI 296 ++ + P E D+N + R DY++++ + Sbjct: 300 IETTFALGSP----EDDFNPDIFPTRPRDLITHTPAEEISLGPALWLWDYLRRSGASGFM 355 Query: 297 IGLSGGIDSALCAAI 311 + LSGGIDS A I Sbjct: 356 LPLSGGIDSCATAVI 370 >gi|255691889|ref|ZP_05415564.1| para-aminobenzoate synthase, component I [Bacteroides finegoldii DSM 17565] gi|260622442|gb|EEX45313.1| para-aminobenzoate synthase, component I [Bacteroides finegoldii DSM 17565] Length = 293 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 18/164 (10%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D G+I K+++P+ ++EK F G +PI +LG+L+C D W Sbjct: 99 NTAVVFDRDGSIAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY 158 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GAE L A + + K ++ + + Q +H LP+I VN+ Sbjct: 159 -PEAARLMTLKGAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNR 217 Query: 208 VG------GQ-DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 VG GQ + ++F G SF Q + Q + +N + E Sbjct: 218 VGHEPDPSGQTNGILFWGNSFVAGPQGEFLAQAGNDRPENMVVE 261 >gi|194468130|ref|ZP_03074116.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lactobacillus reuteri 100-23] gi|194452983|gb|EDX41881.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lactobacillus reuteri 100-23] Length = 261 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 50/230 (21%), Positives = 101/230 (43%), Gaps = 23/230 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV------ 57 + KIA+AQL+ +G+ A N KA+RA EEA D+++ E++ +GY + L Sbjct: 2 RRKIALAQLDIQLGNPAENYQKAKRAIEEAASHHADIVVLPEMWNTGYALDQLAELADEN 61 Query: 58 --FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDK 114 + F+ + LK+ + G + V + + N+ + D GN+I+ +K Sbjct: 62 GQKTQQFLSELA-----LKNQINIVGGSVAV----RCGQSFFNTTYVYDQKGNLISSYEK 112 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 ++L + +E R +G + + IC D+ + + + + G + L+ Sbjct: 113 VHL--FGLMNEDRYLKAGQKENHFELAGVPSASFICYDL-RFPEWIRTVARYGTDILYFP 169 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 P ++K+ ++ + ++ VN+VG F+G S + Sbjct: 170 AEWP--SKRIKQWEIMLRSRAIENQAFVVAVNRVGTDLANSFNGHSLVIN 217 >gi|134078429|emb|CAL00844.1| unnamed protein product [Aspergillus niger] Length = 717 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 130/600 (21%), Positives = 210/600 (35%), Gaps = 149/600 (24%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSFI 63 + +A LN D GN + + +A G L + EL I+GY D + +++ Sbjct: 5 VTLATCSLNQWALDFEGNCERIIESIRKAKAAGATLRVGPELEITGYGCLDAFLEGDTYL 64 Query: 64 QACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + H IV VG P + ++ N VI II +R K+ L N Sbjct: 65 HSWEMFARIID---HPDCQDIVVDVGMPVRHRDCKWNCRVIFYNRKIILIRPKMWLANDG 121 Query: 122 EFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKN 156 + E R F I+G P I RD LG+ CE+++ Sbjct: 122 NYREMRHFTPWQRPREVEDYYLEQIVGKITGQYKVPFGDALISTRDTCLGLETCEELFTP 181 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELI 215 + G E + + S + KL R ++T +Y NQ G D L Sbjct: 182 NGPHIPYGLAGVEIFSNSSGSHHELRKLDTRVNLITQATKLSGGIYLYANQQGCDGDRLY 241 Query: 216 FDGASFCF-------DGQQ----------------------QLAFQMKHFSEQNFMTEWH 246 +DG + G Q A + S Q+ Sbjct: 242 YDGCAMIVVNGNIVAQGSQFSLNDVEVVTATVDIEEVRTYRSSASRGMQASMQSPYVRLD 301 Query: 247 YDQQLSQWN------YMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 D +LS+ + Y ++ Y +EE A AC L DY++++ I LS Sbjct: 302 LDTRLSRRDEDADPGYAPSETLKPRYHVPEEEIALGPACWLW--DYLRRSGAAGYFIPLS 359 Query: 301 GGIDSALCA-AIAVDALGKENVQTI----------------------MLP---------- 327 GGIDS CA +I V ++ +E V+ + LP Sbjct: 360 GGIDS--CATSIIVHSMCREVVKAVQEGNEQVIKDVRRLCAEPADSTWLPTTSQEVCNRI 417 Query: 328 -------YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-----S 375 + +S ++ + A A +G + ++ ++ + +P Sbjct: 418 FHTSYMGTQNSSKETRDRAKLLAAEIGAYHTDFNFDTVITAMMNVFTIVTNFQPKFKVHG 477 Query: 376 GIVAE-----NIQSRIRGNILMALSNHSKAMLLT--------------TSNKSEISVGYG 416 G AE NIQ+R+R M LS ++L T +SN GY Sbjct: 478 GSRAENQALQNIQARLR----MVLSYLFASLLPTVRQRPGGGGLLVLGSSNVDGTLRGYL 533 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASW-RNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T Y S NP+ + K + + +W R+S + P+ + L +P+AEL P Sbjct: 534 TKYDASSADLNPIGSISKVDLKKFIAWARDSFDL-----PILD----DFLTATPTAELEP 584 >gi|190890904|ref|YP_001977446.1| NH(3)-dependent NAD(+)synthetase [Rhizobium etli CIAT 652] gi|190696183|gb|ACE90268.1| probable NH(3)-dependent NAD(+)synthetase protein [Rhizobium etli CIAT 652] Length = 277 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 44/234 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-------ENVQTIMLPYKYTSPQS 335 L+DY+ + ++G+SGG+DS A +A A+ + + LPY + Sbjct: 34 LKDYLVGSGMRGYVLGISGGVDSLTAALLAQKAVRELRDGGYAAEFIAVRLPYGVQA--- 90 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-----------ENIQS 384 D A KAL + P +V + + L G +A NI++ Sbjct: 91 --DEADAVKALAT---IDPDRSMVVNIKAAADAMLAAAQDGGLAFADAGRQDFILGNIKA 145 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R R AL+ +++ T + +E +G+ T +GD + PL L K +V LA Sbjct: 146 RQRMIAQFALAGALGGLVIGTDHAAEAVMGFFTKFGDGAADILPLAGLNKRRVRLLAKRL 205 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + P ++ K P+A+L RP + D+E+ Y +DD ++ Sbjct: 206 GA--------------PDELIFKVPTADLEDQRPLRPDEEAYGVSYDEIDDFLE 245 >gi|300704882|ref|YP_003746485.1| hypothetical protein RCFBP_20710 [Ralstonia solanacearum CFBP2957] gi|299072546|emb|CBJ43896.1| conserved protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 249 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 8/153 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + IA AQ GD+ GN+ + EA + + L++F EL ++GY E + + Sbjct: 1 MSQPFAIAAAQSVSAAGDVQGNVGRHLAFLHEAAARHVRLVVFPELSLTGY--ESAIAHE 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPN 119 + A +++ L+ G VVG P + +GV + ++ ++ G ++ + P Sbjct: 59 VAMYADDASLAPLQDACVQNGLTAVVGAPLRFDDGVRIGALALMPDGKVVTYTKQHLHPG 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 E F +G PI + + IC D Sbjct: 119 -----EGAVFTAGAGGPPISVDGQTIALAICAD 146 >gi|302557362|ref|ZP_07309704.1| hydrolase [Streptomyces griseoflavus Tu4000] gi|302474980|gb|EFL38073.1| hydrolase [Streptomyces griseoflavus Tu4000] Length = 280 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 15/239 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD +AK EA RQG +I F E+F + Y PE Sbjct: 1 MANVVRAALVQAT-WTGDTESMLAKHEEHAREAARQGAKVIGFQEVFNAPYFCQVQDPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDA-GNIIAVRD 113 + + + + ++ + G IVV +Q G N+ ++DA G ++ Sbjct: 60 YRWAEPVPDGPT--VRRMRELARETGMVIVVPVFEIEQAGHYYNTAAVIDADGTVLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G + P+ + R+G+ IC D + L GA+ ++ Sbjct: 118 KHHIPQVKGFWEKFYFRPGNAGWPVFDTAVGRIGVYICYDR-HFPEGWRQLGLNGAQLVY 176 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQL 229 + +A+ + R E +++ + I +N+VG ++ + F G S+ D + Q Sbjct: 177 NPSATHRGLSSYLWRLEQPAAAVANEYF-IAAINRVGVEEYGDNDFYGTSYFVDPRGQF 234 >gi|70734095|ref|YP_257735.1| NAD synthetase [Pseudomonas fluorescens Pf-5] gi|68348394|gb|AAY96000.1| NAD+ synthetase [Pseudomonas fluorescens Pf-5] Length = 275 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 48/225 (21%), Positives = 94/225 (41%), Gaps = 31/225 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-------GKENVQTIM 325 EA+ + ++D + + +++G+SGG+DS +A A+ G + + I Sbjct: 25 EAEIARRIRFIQDCLVNSGLKSLVLGISGGVDSLTAGLLAQRAMRELRERSGDDRYRFIA 84 Query: 326 LPYKYTSPQSLEDAAACAKALGC----KYDVLP-IHDLVNHFFSLMSQFLQEEPSGIVAE 380 + Y + DA A + ++ P + L N + Q V Sbjct: 85 VRLPYETQFDEHDAQASVDFINPDERHTVNIGPAVRALANEVAAFEGQHAVSR--DFVLG 142 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N ++R+R ++ + +++ T + +E +G+ T +GD + PL L K QV + Sbjct: 143 NTKARMRMVAQYTIAGAAHGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRSI 202 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 A + + P S++EK P+A+L P + D+ S Sbjct: 203 ARYFGA--------------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|225683757|gb|EEH22041.1| glutamine-dependent NAD synthetase [Paracoccidioides brasiliensis Pb03] Length = 708 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 86/380 (22%), Positives = 138/380 (36%), Gaps = 72/380 (18%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN V D GN + + A G L + EL I+GY +D + Sbjct: 1 MAPLVTVATCSLNQWVLDFEGNTTRIIESIRIAKAAGAKLRVGPELEITGYSCQDHFLEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPR-----QDQEGVLNSVVILDAGNIIAVRDKI 115 I T+ I +G P + + N+ + + I+ ++ K+ Sbjct: 61 DLYLHVWQCIATIVDHPDCQDILIDIGAPSDVYKVRHRNIRYNARIHILNRKILLIKPKM 120 Query: 116 NLPNYSEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILIC 150 L + ++E R F I+G + PI D +GI C Sbjct: 121 WLAGDANYYEYRWFTPWAKPRHVEEYHLERIVGNITGQATVPIGDAVISTYDSAIGIETC 180 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG- 209 E+++ SN H+ G E + + S + KLK+R E++ + +Y NQ G Sbjct: 181 EELFTPSNPGIHMGLNGVEIFTNSSGSHHELRKLKQRIELIR-HCTRGGGIYLYANQRGE 239 Query: 210 -GQDELIFDGASFCFDGQQQLA----FQMKHFSE----------QNFMTEWHYDQQLSQW 254 G L FDG++ F + + F +K ++F T Q SQ Sbjct: 240 DGNGRLYFDGSAGIFVNGRVVGMSSQFSLKDVDVVTAVVDLEEVRSFRTSVSRSAQASQA 299 Query: 255 NYM----------------------SDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 S D + P +EE A AC L DY++++ Sbjct: 300 PVYQRIEAQISLSKKSDAFNPSIKPSPDIELNFHTP-EEEIALGPACW--LWDYLRRSRQ 356 Query: 293 HKVIIGLSGGIDSALCAAIA 312 + LSGG+DSA A I Sbjct: 357 SGFFLPLSGGLDSASVAVIT 376 >gi|330992919|ref|ZP_08316862.1| Aliphatic nitrilase [Gluconacetobacter sp. SXCC-1] gi|329760073|gb|EGG76574.1| Aliphatic nitrilase [Gluconacetobacter sp. SXCC-1] Length = 324 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 23/174 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIA-GNIAKARRAREEANRQGMDLILFTELFISGYP------- 52 M + ++ A Q++PV+GD G K +A EA +G+ L +F E F+ YP Sbjct: 1 MSRIVRAAAIQISPVLGDDGLGTARKVCQAIREAAEKGVKLAVFPETFVPYYPYFSFIQP 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 E L + + D + G +V+G +D + N+ +I DA G Sbjct: 61 AFRFGGEHLELYERAVVIPGPVTDMVAEAARQTGMVVVLGVNERDFGTLYNTQIIFDATG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 I+ R KI P Y HE+ + G V R+G L C W++ N Sbjct: 121 EILLKRRKIT-PTY---HERMVWGQGDGAGLKVVESAAGRIGALAC---WEHYN 167 >gi|227488201|ref|ZP_03918517.1| NAD synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091771|gb|EEI27083.1| NAD synthetase [Corynebacterium glucuronolyticum ATCC 51867] Length = 286 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 27/239 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT- 323 PL + + + V L DY+ ++G+SGG DS L A +AV+ L + T Sbjct: 28 PLIDSVKEVESRVTFLADYLSSTGLGSYVLGISGGQDSTLAGKLAQMAVEKLRESGTDTE 87 Query: 324 ---IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 + LPY S + D A + ++ I + V+ + L G + Sbjct: 88 FFAVRLPYGIQSDANDVDVALEFISPDHTLEI-NIKEGVDALSDATAAALGMAHLGDFNK 146 Query: 381 -NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N+++R R A++ + +++ T + +E G+ T +GD + PL L K+Q + Sbjct: 147 GNVKARARMIAQYAVAGEHRGLVIGTDHAAENITGFFTKFGDGASDILPLWGLNKSQGAE 206 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L + P S +K P+A+L RP D+E+L YP +D ++ Sbjct: 207 LLRHMGA--------------PESTWKKVPTADLEEDRPALPDEEALGVTYPEIDAYLR 251 >gi|90409684|ref|ZP_01217701.1| hypothetical protein P3TCK_02936 [Photobacterium profundum 3TCK] gi|90329037|gb|EAS45294.1| hypothetical protein P3TCK_02936 [Photobacterium profundum 3TCK] Length = 279 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 19/162 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMD--------LILFTELFISGY----P 52 +KI++ Q++ + D+AGNIA + +A +D L++ ELF +GY P Sbjct: 1 MKISLVQMDVIHKDVAGNIALLDQLMNQAVNNAIDISGGGLGELVVTPELFSTGYLFDHP 60 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR 112 E +S +++ TL H +V G + NSV++++ + V Sbjct: 61 GEIHQLAESIDGKTVTSLITLAKKYH---VTLVAGIAEKRHGEFYNSVIVVNESGLQEVY 117 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 K+ L N +K+ F G + I GI IC D+W Sbjct: 118 RKLALTNV----DKQYFSRGDELVTFKLQGICFGIAICFDLW 155 >gi|157813156|gb|ABV81323.1| putative GMP synthetase [Antheraea paukstadtorum] Length = 199 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 11/135 (8%) Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 Q LS N++ D + + L+ +C+ +RD V N KV++ +SGG+DS +C Sbjct: 8 QMLS--NFLFDIAGMSRTFTLRSRR---ESCLQYIRDTVGDTN--KVLVLVSGGVDSTVC 60 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 AA+ AL ++ V + + + C + LG + V+ H F++ S Sbjct: 61 AALLRTALREDQVIALHIDNGFMRKNESAKVERCLRELGVRLHVVN----AAHQFAVGST 116 Query: 369 FLQEEPSGIVAENIQ 383 ++E +G VA ++ Sbjct: 117 VIRESGAGGVAGRVR 131 >gi|291443336|ref|ZP_06582726.1| hydrolase [Streptomyces roseosporus NRRL 15998] gi|291346283|gb|EFE73187.1| hydrolase [Streptomyces roseosporus NRRL 15998] Length = 262 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 22/229 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ Q + G +A N+ A A G L++ ELF++GY D V + Sbjct: 1 MRTALLQSSGRPGAVAENLKTLDEAAARAAGAGARLLVAPELFLTGYAIGDAVPVLA-EP 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + G ++ G+P +D E + N+ ++ A D + L NY + H Sbjct: 60 ADGPGAEAVAEIAVRHGLAVLYGYPERDGERIFNASQLIGA-------DGVRLANYRKTH 112 Query: 125 -----EKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 E+ F G +V D IR+G+LIC D+ N+ H G + L A Sbjct: 113 LFGCFEQEWFTPGEQT--VVQADLDGIRIGLLICYDVEFPENVRAH-ALAGTDLLLVPTA 169 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 H +V + + + YVN+ G + E F G S C G Sbjct: 170 Q--MHPFQFVAESVVPVRAFESQMYVAYVNRTGPEGEFEFVGLS-CLAG 215 >gi|262184943|ref|ZP_06044364.1| NAD synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 274 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSL 336 V L DY++ ++G+SGG DS L A +AV + + + LP+ + + Sbjct: 35 VAFLVDYLRTTGAKGFVLGISGGQDSTLAGRLAQLAVARVDGAHFWAVRLPHGVQADE-- 92 Query: 337 EDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAE-NIQSRIRGNILMAL 394 +DA + Y + + I + ++ L ++ G N+++R+R + AL Sbjct: 93 DDAQIALDFIEPDYSLTVNIAEATAALDGAVANALHQDSLGDFNRGNLKARLRMSAQYAL 152 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + A+++ T + +E + T +GD + PL L K Q +L LG Sbjct: 153 AGEVGALVIGTDHAAENVTAFFTKWGDGAADVLPLAGLNKRQGARL---------LKHLG 203 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P S +K P+A+L RP +D+E+L Y +DD ++ Sbjct: 204 -----APDSTWKKVPTADLEDDRPLLSDEEALGVTYAHIDDYLE 242 >gi|268593447|ref|ZP_06127668.1| hydrolase, carbon-nitrogen family [Providencia rettgeri DSM 1131] gi|291310868|gb|EFE51321.1| hydrolase, carbon-nitrogen family [Providencia rettgeri DSM 1131] Length = 263 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 16/229 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQL D A N+ KA A ++A + G DL+L E+F++ P + + + Sbjct: 1 MKIAIAQLASS-PDKALNLKKACEAIQKAAQGGADLVLLPEMFMAFVPADSGISYADVAE 59 Query: 65 ACSSA-IDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + L G + G P + + ++++ G +I K +L + Sbjct: 60 PVDGPFVSQLAKAAQQYGIYVTCGIYESAPNEPKRAFNTTIMLNRQGELIYHYQKTHLYD 119 Query: 120 YSEFHEKRTFI-SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + E I S P+ ++G+L+C ++ + + + L GA+ + L + Sbjct: 120 AFSYQESLNIIQSNNELKPVETEFGKIGVLVCYEL-RFPEVARKLTLAGADLI--LVPTA 176 Query: 179 YYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + LK+ H +V + +P+ +Q G IF G S D Sbjct: 177 WVSGPLKEEHYQTLVKARALENTVPVCACDQTGN----IFIGRSLVCDA 221 >gi|118592418|ref|ZP_01549810.1| Nitrilase [Stappia aggregata IAM 12614] gi|118435076|gb|EAV41725.1| Nitrilase [Stappia aggregata IAM 12614] Length = 335 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 22/171 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--------PP 53 +K +K+A Q P+ D+ +I KA + EA R G +I F E ++ GY P Sbjct: 1 MKAIKVAAVQAAPIFLDLNRSIDKAEQLITEAARNGAKIIAFPETWLPGYPWFVWLSSPA 60 Query: 54 EDLVFKKSF----IQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNI 108 E + F + + S ++ L++ I +GF R++ ++ +I + G++ Sbjct: 61 EAMQFFAPYHHNSMDVNSEQMNRLQAIAQRNDIFINMGFSERENGTRYMSQAMISNEGDL 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSND-PIVFRDI-RLGILICEDIWKNS 157 + VR K+ F E+ F G +D +V I R+G L C W+++ Sbjct: 121 LQVRRKLK----PTFAERMVFGEGDGSDLEVVNTSIGRIGALNC---WEHA 164 >gi|40890255|gb|AAR97472.1| nitrilase [uncultured organism] Length = 330 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 20/172 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 +K +K A QL+PV+ G + + R E RQG+ F E + YP Sbjct: 1 MKVVKAAAVQLSPVLYSREGTVERVVRKIHELGRQGVQFATFPETVVPYYPYFSFVQTPL 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 PE L + S A D + G + +G +D + N+ ++ DA G Sbjct: 61 QIIAGPEHLKLLDQAVTVPSPATDAISEAARQAGVVVSIGVNERDGGTLYNTQLLFDADG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 +I R KI ++ + SG + + R+G L C W+++N Sbjct: 121 ALIQRRRKITPTHFERMIWGQGDGSGLRA--VDSKVGRIGQLAC---WEHNN 167 >gi|240104631|pdb|3HMQ|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Nad Synthetase (Nade) From Salmonella Typhimurium Lt2 In Complex With Nad(+) Length = 275 Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 37/216 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQXAIAELREETGDNALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERX 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGXTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + LG P + +K P+A+L + D+ SLP Sbjct: 196 -LAALG-----CPEHLYKKVPTADL---EDDRPSLP 222 >gi|229093092|ref|ZP_04224215.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock3-42] gi|228690291|gb|EEL44083.1| Carbon-nitrogen hydrolase [Bacillus cereus Rock3-42] Length = 252 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 13/217 (5%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSFIQACSSA 69 ++ V GD+ NI A+ EA ++ D+I+ EL+ +GY L + + ++ Sbjct: 1 MDIVFGDVEKNIENAKNKISEAMKERPDVIVLPELWTTGYDLTRLSEIADRDGLETKEKL 60 Query: 70 IDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSV-VILDAGNIIAVRDKINLPNYSEFHEKR 127 I+ K G IV G +Q ++GV N++ V+ + G ++ K++L + E + Sbjct: 61 IEWSKQ----YGVHIVGGSIAKQTEQGVTNTMYVVTNKGELVNEYSKVHL--FQLMDEHK 114 Query: 128 TFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 I+G S D+ IC DI + H K GA+ LF + P +L Sbjct: 115 YLIAGNSTGEFKLDDVECAGTICYDIRFPEWMRVHTAK-GAKVLFVVAEWPLV--RLAHW 171 Query: 188 HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++ + ++ N+ G F G S D Sbjct: 172 RLLLQARAVENQCYVVACNRAGKDPNNEFAGHSLIVD 208 >gi|218460762|ref|ZP_03500853.1| NAD synthetase [Rhizobium etli Kim 5] Length = 277 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 32/228 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDS---ALCAAIAVDALGKEN----VQTIMLPYKYTSPQS 335 L+DY+ + ++G+SGG+DS AL A AV L + LPY + ++ Sbjct: 34 LKDYLVASGLRSYVLGISGGVDSLTAALLAQKAVRELRDSGHAVEFVAVRLPYGVQADEA 93 Query: 336 LEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQ----FLQEEPSGIVAENIQSRIRGNI 390 DA +G + V+ I + + + F + NI++R R Sbjct: 94 --DAEKALATIGADRSMVINIKAAADGMLAAAQKGGLAFADAGRQDFILGNIKARQRMIA 151 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 AL+ +++ T + +E +G+ T +GD + PL L K +V LA + Sbjct: 152 QFALAGALGGLVIGTDHAAEAVMGFFTKFGDGAADILPLAGLNKRRVRLLAKRLGA---- 207 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P ++ K P+A+L RP + D+E+ Y +DD ++ Sbjct: 208 ----------PDELVFKVPTADLEDQRPLRPDEEAYGVTYDEIDDFLE 245 >gi|78776801|ref|YP_393116.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurimonas denitrificans DSM 1251] gi|78497341|gb|ABB43881.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 260 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 5/150 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ LN + D N+ + ++A DLI+F E+ ++G+ ++ F I+ Sbjct: 1 MKIALISLNQIWEDKDKNLILCEKNIQKAVEGKADLIIFPEMTLTGF-SNNIPFIVENIE 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEF 123 S I S +V G +D + LN V +D G+++ KI+ ++ Sbjct: 60 D-SKTIKEFSSLAKKYNTALVFGVAIKDGDKALNKAVFIDKNGSVLGKYSKIHPFTFA-- 116 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDI 153 E + F +G S + + F + ++G+ IC D+ Sbjct: 117 GEDKYFNAGNSLEIVNFENFKIGLTICYDL 146 >gi|319649828|ref|ZP_08003980.1| hypothetical protein HMPREF1013_00584 [Bacillus sp. 2_A_57_CT2] gi|317398502|gb|EFV79188.1| hypothetical protein HMPREF1013_00584 [Bacillus sp. 2_A_57_CT2] Length = 261 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 11/224 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV-FKKSF 62 KLKIA Q++ G N A ++A R D+I+ EL+ +GY DL + Sbjct: 2 KLKIACLQMDIAFGKPEDNFKAAEIMIKKALRDKPDVIVLPELWTTGY---DLTRLGEIA 58 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNY 120 Q S++ LK ++ G ++ EG+ N+++I+D G++I K++L + Sbjct: 59 DQDAESSLVFLKKAAQSNRVHMIGGSVAKKTPEGIYNTLLIVDNQGDLIHEYSKLHL--F 116 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +E G + + + +IC DI + H +GAE LF + P Sbjct: 117 KLMNEHLYLNGGTAKGVFSLENRKFAGMICYDIRFPEWVRTH-TAEGAEALFVVAEWPL- 174 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + +I N+ G + +F G S D Sbjct: 175 -ARLAHWRALLIARAIENQCYVIACNRSGSDPDNVFAGHSMIID 217 >gi|146413839|ref|XP_001482890.1| hypothetical protein PGUG_04845 [Meyerozyma guilliermondii ATCC 6260] Length = 317 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 12/133 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP------- 53 M K+K+A+ Q PV ++ + + E A +G +LI F E+F+ GYP Sbjct: 1 MGAKVKVAVVQAEPVWFNLQETVKRVNELIELAYNKGAELIAFPEVFVPGYPTWIWTNAA 60 Query: 54 ---EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNII 109 +L++ K+ + S ++ +V+GF +DQ + S I+D G I+ Sbjct: 61 DLDRNLMYTKNSLTYDSPEFISIIETVKKYPIHVVLGFSEKDQGSLYISQCIIDNTGEIV 120 Query: 110 AVRDKINLPNYSE 122 R K P + E Sbjct: 121 LKRRKFK-PTHVE 132 >gi|121998045|ref|YP_001002832.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Halorhodospira halophila SL1] gi|121589450|gb|ABM62030.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Halorhodospira halophila SL1] Length = 300 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 28/237 (11%) Query: 13 NPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--PEDLVFKKSFIQACSSAI 70 +P D N+ ++ A G +L+L EL YP E + Sbjct: 12 HPCSDDRQANLERSVAGIARAAEAGAELVLLQELHCGPYPCYEEHPAHFDAAEPIPGPGT 71 Query: 71 DTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKR 127 + L + G +VVG F R+ N+ V+L+ G++ K+++P+ ++EK Sbjct: 72 ERLGQAAAEHGV-VVVGSLFERRAAGLYHNTAVVLERDGSLAGTYRKMHIPDDPGYYEKF 130 Query: 128 TFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK--- 183 F G PI RLG+L+C D W + + GAE L A + ++ Sbjct: 131 YFTPGDLGFTPIDTSVGRLGVLVCWDQW-FPEAARLMALAGAEILLYPTAIGFAPDEPDD 189 Query: 184 -----------LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 +++ H I G LP+ N+VG + F G SF Q ++ Sbjct: 190 EQARQVEAWETVQRGHAITNG------LPVAACNRVGTEPAARFWGRSFVCGPQGEV 240 >gi|90408324|ref|ZP_01216488.1| NAD(+) synthetase [Psychromonas sp. CNPT3] gi|90310555|gb|EAS38676.1| NAD(+) synthetase [Psychromonas sp. CNPT3] Length = 275 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 60/278 (21%), Positives = 115/278 (41%), Gaps = 59/278 (21%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT------SPQSL 336 ++ +Q+ H +++G+SGG+DS+ + A+ + N + Y++ + Q Sbjct: 28 IKTKLQQARSHTLVLGISGGVDSSCAGRLCQIAINELNNENTTNAYQFIAVRLPYAEQKD 87 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--------------VAENI 382 E A A C P H+L + S QE + V N+ Sbjct: 88 EHEAQLALKFIC-----PTHNLTVNVQSGTDAIHQETLQSLQQTNLDINGVNLDFVKGNV 142 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R+R ++ + +++ T + +E G+ T +GD + PL L K QV LA Sbjct: 143 KARMRMIAQYEIAGLTGGLVVGTDHSAENITGFYTKHGDGACDLAPLFGLNKRQVRSLAK 202 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRI 496 + P ++EK+P+A+L +P D+ +L Y +DD + K++ Sbjct: 203 TLGA--------------PKILVEKAPTADLEEQKPLLEDEVALGMTYQQIDDFLEGKKV 248 Query: 497 VENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 Q+ D+ ++ L +E+KR+ P Sbjct: 249 ----------PQDIEDKLIK----LYLATEHKRQSIPT 272 >gi|322376996|ref|ZP_08051489.1| NAD+ synthetase [Streptococcus sp. M334] gi|321282803|gb|EFX59810.1| NAD+ synthetase [Streptococcus sp. M334] Length = 274 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 30/254 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDISLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGSHSGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII- 493 L L E+ P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 L---------------LQELGADPALYEKIPTADLEEDKPGLADEVALGVTYEEIDDYLE 239 Query: 494 -KRIVENEESFINN 506 K+I ++ I N Sbjct: 240 CKKISPEAQATIEN 253 >gi|312171702|emb|CBX79960.1| Aliphatic amidase [Erwinia amylovora ATCC BAA-2158] Length = 262 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 4/94 (4%) Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIW 154 V+N++V++ G IIA DK++L + E R+ +G P+V D I +G++IC DI Sbjct: 92 VVNALVVIRQGRIIARYDKLHLYDAFTLQESRSVTAGDGIPPLVEVDGINVGLMICYDI- 150 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 + + + L GA+ L + S + LK+ H Sbjct: 151 RFPELARRLVLDGADLL--VLPSAWVRGPLKEMH 182 >gi|169833715|ref|YP_001694854.1| NAD synthetase [Streptococcus pneumoniae Hungary19A-6] gi|238688365|sp|B1ICL9|NADE_STRPI RecName: Full=NH(3)-dependent NAD(+) synthetase gi|168996217|gb|ACA36829.1| NAD+ synthetase [Streptococcus pneumoniae Hungary19A-6] Length = 274 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 28/253 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESVDAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGSHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII-- 493 L + P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 LLQKLGAE--------------PALYEKIPTADLEEDKPGLADEVALGVTYAEIDDYLEG 240 Query: 494 KRIVENEESFINN 506 K I ++ I N Sbjct: 241 KTISPEAQATIEN 253 >gi|154148802|ref|YP_001407303.1| hydrolase in agr operon (ORF 5) [Campylobacter hominis ATCC BAA-381] gi|153804811|gb|ABS51818.1| hydrolase in agr operon (ORF 5) [Campylobacter hominis ATCC BAA-381] Length = 256 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 16/182 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP----EDLVFKK 60 +KI++ Q + V I N K ++A + D+I+ ELF +G+ P E K Sbjct: 1 MKISMIQFSSVKFQIEKNYEKVLNFMQDAISKKTDIIVLPELFDTGFFPSKNLEKFADKN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLP 118 +F A + + + IV G + + N+ I D G IIA DKI+L Sbjct: 61 AF-----RAREIFSNFARENCVNIVAGSICEMRNDKLFNASYIFDKNGKIIANYDKIHL- 114 Query: 119 NYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 +S +EK + I I FR +I GI+IC D+ + + I K L +G LF + Sbjct: 115 -FSTGNEKESEIFTPGEKIISFRLNEIPCGIMICYDL-RFAEIAKILALRGISVLFVVAQ 172 Query: 177 SP 178 P Sbjct: 173 WP 174 >gi|16800147|ref|NP_470415.1| NAD synthetase [Listeria innocua Clip11262] gi|25090776|sp|Q92CU3|NADE_LISIN RecName: Full=NH(3)-dependent NAD(+) synthetase gi|16413537|emb|CAC96309.1| lin1078 [Listeria innocua Clip11262] gi|313619461|gb|EFR91160.1| NAD+ synthetase [Listeria innocua FSL S4-378] Length = 274 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++KN F K ++G+SGG DS L +A A+ + +T + LPY Sbjct: 30 LKAYLKKNTFLKSFVLGISGGQDSTLTGKLAQMAISELRAETGDDEYQFFAVSLPYGTQL 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 +S A A + V I V+ + +++ E S N ++R R + Sbjct: 90 DESDRQDALDFMAPDNRLTV-NIKASVDASVAALAE-AGVELSDFAKGNEKARERMKVQY 147 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A++ K +++ T + +E G+ T YGD NPL L K R + Sbjct: 148 AIAAMHKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNK---------RQGKALLKE 198 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + K P+A+L +P D+ +L Y +DD ++ Sbjct: 199 LG-----CPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLE 239 >gi|294632203|ref|ZP_06710763.1| hydrolase [Streptomyces sp. e14] gi|292835536|gb|EFF93885.1| hydrolase [Streptomyces sp. e14] Length = 280 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 10/184 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF 58 M + ++ A+ Q GD I + +A +A QG ++ F ELF Y +D F Sbjct: 1 MSRVIRAAVFQ-TAWTGDKESMIRRHEQAVRDAAAQGAQVLCFQELFYGPYFCQVQDPAF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFP--RQDQEGVL-NSVVILDA-GNIIAVRDK 114 + Q I T + GIV+ P ++Q GVL N+ ++DA G+ + K Sbjct: 60 YEYAEQIPEGPI-TRRFQALARELGIVLVLPMYEEEQPGVLYNTAAVIDADGSYLGKYRK 118 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFS 173 ++P F EK F G S P+ + ++G+ IC D + L GAE +F+ Sbjct: 119 THIPQVQGFWEKFYFRPGNSGWPVFDTAVGKVGVYICYDR-HFPEGWRALGLAGAEIVFN 177 Query: 174 LNAS 177 +A+ Sbjct: 178 PSAT 181 >gi|297203468|ref|ZP_06920865.1| N-carbamoylputrescine amidase [Streptomyces sviceus ATCC 29083] gi|197716326|gb|EDY60360.1| N-carbamoylputrescine amidase [Streptomyces sviceus ATCC 29083] Length = 280 Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 23/243 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD +AK EA RQG +I F E+F + Y PE Sbjct: 1 MANVVRAALVQAT-WTGDTESMVAKHEEHAREAARQGAKIIGFQEVFNAPYFCQVQEPEH 59 Query: 56 LVFKKSFIQA-CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVR 112 + + +S + L +T G IVV +Q G N+ V++DA G+++ Sbjct: 60 YRWAEPVPDGPTTSRMQDLARET---GMVIVVPVFEVEQSGFYYNTAVVIDADGSVLGKY 116 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL 171 K ++P F EK F G P+ + ++G+ IC D + L GA+ + Sbjct: 117 RKHHIPQVKGFWEKYYFKPGNLGWPVFDTAVGKVGVYICYDR-HFPEGWRQLGLNGAQIV 175 Query: 172 FSLNASPYYHNKLKK---RHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQ 226 ++ +A+ H L R E +++ + + +N+VG ++ + F G S+ D + Sbjct: 176 YNPSAT---HRGLSSHLWRLEQPAAAVANEYF-VAAINRVGVEEYGDNDFYGTSYFVDPR 231 Query: 227 QQL 229 Q Sbjct: 232 GQF 234 >gi|226531330|ref|NP_001146676.1| hypothetical protein LOC100280276 [Zea mays] gi|219888265|gb|ACL54507.1| unknown [Zea mays] Length = 356 Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 19/201 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L K K+A+ QL+ V D NIA AR A E+A +G L+L E++ Y + Sbjct: 72 LSKFKVALCQLS-VTADKNRNIAHARAAIEKAASEGAKLVLLPEIWNGPYSNDSFPEYAE 130 Query: 62 FIQACSSAID--TLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDA-GNIIAVRDKIN 116 I+A A ++ S+ +VG ++ G + N+ I + G + KI+ Sbjct: 131 DIEAGGDAAPSFSMMSEVARILQVTLVGGSIAERSGNNLYNTCCIFGSDGKLKGKHRKIH 190 Query: 117 L-----PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEF 170 L P F E +T +G N +V D+ R+GI IC DI + + +GA Sbjct: 191 LFDIDIPGKITFKESKTLTAG-QNPTVVDTDVGRIGIGICYDI-RFQELAMLYAARGAHL 248 Query: 171 L-----FSLNASPYYHNKLKK 186 L F++ P + L++ Sbjct: 249 LCYPGAFNMTTGPLHWELLQR 269 >gi|225375086|ref|ZP_03752307.1| hypothetical protein ROSEINA2194_00709 [Roseburia inulinivorans DSM 16841] gi|225213158|gb|EEG95512.1| hypothetical protein ROSEINA2194_00709 [Roseburia inulinivorans DSM 16841] Length = 246 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 17/234 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++KI +A + DI N K + +E N +DLILF E F+ G+ D ++ Sbjct: 2 QMKIVLAAVGFYERDIEYNRNKIIKCLKE-NSGKVDLILFGETFLQGFEALDWKYETDQH 60 Query: 64 QACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 A S S I T++ + + GF + + +S + + A GNI+ + +++ Sbjct: 61 MALSVSDSNIQTIQKAAEENALAVSFGFLEKAGNKIYSSQLTIGADGNILNLFRRVS-KG 119 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF----LFSLN 175 + E + G + I +C D+W N+ +KK A+ +++ Sbjct: 120 WRESFTDEHYAEGDMFTKFEYLGNTFSIGLCGDLWDEKNVM-QIKKLRADVVLWPVYTDF 178 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQV--GGQDELIFDGASFCF-DGQ 226 ++ ++ ++K + Q + ++ VN V G +E + G + CF DGQ Sbjct: 179 SAKEWNKEMKYEY---AAQSKKIGRQVLLVNSVCLSGNEEELAKGGAVCFLDGQ 229 >gi|170077287|ref|YP_001733925.1| nitrilase [Synechococcus sp. PCC 7002] gi|169884956|gb|ACA98669.1| nitrilase [Synechococcus sp. PCC 7002] Length = 335 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 24/172 (13%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PEDLV 57 K ++ A AQ++PV+ AG K +A ++G+ LI+F E F+ YP ++ Sbjct: 6 KTIRAAAAQISPVLFSCAGTTEKVLETITQAAKEGVQLIVFPETFVPYYPYFSFIEPPVL 65 Query: 58 FKKSFIQACSSAIDTL---------KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNI 108 KS +Q A+ + HD +V+G +++ + N+ +I D Sbjct: 66 MGKSHLQLYEQAVTVPGPVTTAVAEAAQAHD--MVVVLGVNEREEGSLYNTQLIFDHDGT 123 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 + ++ + P Y HE+ + G R+G L C W++ N Sbjct: 124 LRLKRRKITPTY---HERMVWGQGDGAGLTTVDTAVGRVGALAC---WEHYN 169 >gi|227833940|ref|YP_002835647.1| NAD-synthetase [Corynebacterium aurimucosum ATCC 700975] gi|227454956|gb|ACP33709.1| NAD-synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 280 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 25/224 (11%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSL 336 V L DY++ ++G+SGG DS L A +AV + + + LP+ + + Sbjct: 41 VAFLVDYLRTTGAKGFVLGISGGQDSTLAGRLAQLAVARVDGAHFWAVRLPHGVQADE-- 98 Query: 337 EDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIVAE-NIQSRIRGNILMAL 394 +DA + Y + + I + ++ L ++ G N+++R+R + AL Sbjct: 99 DDAQIALDFIEPDYSLTVNIAEATAALDGAVANALHQDSLGDFNRGNLKARLRMSAQYAL 158 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + A+++ T + +E + T +GD + PL L K Q +L LG Sbjct: 159 AGEVGALVIGTDHAAENVTAFFTKWGDGAADVLPLAGLNKRQGARL---------LKHLG 209 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P S +K P+A+L RP +D+E+L Y +DD ++ Sbjct: 210 -----APDSTWKKVPTADLEDDRPLLSDEEALGVTYAHIDDYLE 248 >gi|40890243|gb|AAR97466.1| nitrilase [uncultured organism] Length = 336 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 21/166 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 ++ +K A QL+PV+ G + K R E QG++ F E + YP Sbjct: 1 MRVVKAAAVQLSPVLYSREGTVEKVVRKIHELGDQGVEFATFPETVVPYYPYFSAVQTPI 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 PE L + + S A D + G + +G +D + N+ ++ DA G Sbjct: 61 QNMHGPEHLKLLEQSVTVPSPATDAIGDACRHAGVVVSIGVNERDGGTIYNTQLLFDADG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSND--PIVFRDIRLGILIC 150 +I R KI F+E+ + G + + R R+G L C Sbjct: 121 TLIQRRRKIT----PTFYERMVWGQGDGSGLRAVDSRVGRIGQLAC 162 >gi|257870093|ref|ZP_05649746.1| NAD synthase [Enterococcus gallinarum EG2] gi|257804257|gb|EEV33079.1| NAD synthase [Enterococcus gallinarum EG2] Length = 274 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 40/260 (15%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIA---VDALGKE--- 319 +P + +A+ + L+ Y+QKN F K +++G+SGG DS L +A ++ + E Sbjct: 14 VPTIDAKAEIRNSIEFLKAYLQKNPFLKTLVLGISGGQDSTLAGRLAQLTMEEMRSETND 73 Query: 320 -NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV 378 N Q I + Y EDA + + K D I VN ++ +Q E +G+ Sbjct: 74 PNYQFIAIRLPYGEQADEEDAKKAIEFI--KPD---ITLRVNIKAAVDAQVAAVEEAGLP 128 Query: 379 AE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 NI++R R A++ +L T + +E G+ T +GD PL L Sbjct: 129 VSDFNKGNIKARQRMITQYAVAGEKAGAVLGTDHAAENITGFFTKFGDGGADLLPLFRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPI 488 K Q QL L E+ P ++ +K P+A+L +P D+ +L Y Sbjct: 189 KRQGRQL---------------LQELGAPEALYKKVPTADLEDGKPMIADEVALGVTYDE 233 Query: 489 LDDII--KRIVENEESFINN 506 +DD + K + N + I N Sbjct: 234 IDDYLEGKTVSPNAQQTIEN 253 >gi|170738250|ref|YP_001779510.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia MC0-3] gi|169820438|gb|ACA95020.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia MC0-3] Length = 299 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 93/237 (39%), Gaps = 26/237 (10%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED------- 55 + IA Q+ P +G N+A A E A R G LI+ EL SGY ED Sbjct: 15 RAFTIACVQMEPRIGAAQHNLATALDRIETAARNGAALIVLPELASSGYVFEDRDEALAL 74 Query: 56 --LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 LV +A + L + H IV G +D + NS + G + V Sbjct: 75 AELVPDGPTARAFEAIARRL--NVH-----IVSGIAERDGARLYNSALFAGPGGHLGVYR 127 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL- 171 K++L + +EKR F G P+ + R+ + IC D+W + QGA+ + Sbjct: 128 KLHLWD----NEKRFFEPGDRGVPVFDTPLGRIAMAICYDVWFPETF-RLAVMQGADLVC 182 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVH---LPIIYVNQVGGQDELIFDGASFCFDG 225 N P + T ++ H + I ++VG + + F G S G Sbjct: 183 VPTNWVPMPSQPDDRPGMATTLTMAAAHSNGIAIACADRVGIERDQPFIGQSLIVGG 239 >gi|194016080|ref|ZP_03054695.1| hydrolase in agr operon (ORF 5) [Bacillus pumilus ATCC 7061] gi|194012435|gb|EDW22002.1| hydrolase in agr operon (ORF 5) [Bacillus pumilus ATCC 7061] Length = 261 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 42/251 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE------DLVF 58 +KIA+ Q++ +G+ N KA EEA R+ DLI+ E++ +GY E D+ Sbjct: 1 MKIALVQMDVQIGEPDVNFQKAEAFLEEAIREQPDLIILPEMWNTGYALEKADQLADVNG 60 Query: 59 KK------SFI---QACSSAIDTLKSDTHDGG-AGIVVGFPRQDQEGV----LNSVVILD 104 ++ SF Q A L T D + GF RQ + V ++ ++D Sbjct: 61 ERTKQLFSSFARKHQVVLIAGSVLNKRTEDERITNTMYGFNRQGELLVDYDKIHLFRLMD 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 N + D++ L +Y E D+++G +IC D+ + + + L Sbjct: 121 EHNYLTAGDQLGLFDYDE-------------------DVKIGAMICYDL-RFPQLSRTLV 160 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +GA+ L +N + + ++ ++ + +I VN+ G + F G S D Sbjct: 161 NKGAKVL--INTAQWPSARVDHWRSLLIARAIENQSFMIAVNRTGTSRDTEFPGHSMVID 218 Query: 225 GQQQLAFQMKH 235 ++ + H Sbjct: 219 PLGRILLETSH 229 >gi|154173974|ref|YP_001408459.1| carbon-nitrogen family hydrolase [Campylobacter curvus 525.92] gi|112802210|gb|EAT99554.1| hydrolase, carbon-nitrogen family [Campylobacter curvus 525.92] Length = 290 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 27/256 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 +KIA+ Q G +AK EA + G L++ EL + Y ED F F Sbjct: 1 MKIALLQ-QKFHGSKEATVAKTAELVREAAQGGAQLVVCQELHQTQYFCQSEDTSF---F 56 Query: 63 IQACSSAIDT-LKSD-THDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLP 118 A D SD G +V + +G+ N+ + + G+I K+++P Sbjct: 57 DLAGEWEADVRFWSDVARANGVVLVTSLFEKRTDGLYHNTAFVFEKDGSIAGKYRKMHIP 116 Query: 119 NYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + F+EK F G +PI RLG+L+C D W + + +GA+ L A Sbjct: 117 DDPGFYEKFYFTPGDIGFEPIDTSVGRLGVLVCWDQW-YPEAARLMALRGAKILIYPTAI 175 Query: 178 PYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGASFC 222 ++ K ++ V Q H LP++ VN+VG + + + F G SF Sbjct: 176 GWFEADSEEEKARQLEAWVAVQRGHAIANGLPVVAVNRVGFEKDDSGVMAGIKFWGNSFV 235 Query: 223 FDGQQQLAFQMKHFSE 238 F Q + ++ SE Sbjct: 236 FGAQGEQLWRADSQSE 251 >gi|46139685|ref|XP_391533.1| hypothetical protein FG11357.1 [Gibberella zeae PH-1] Length = 306 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 31/175 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 +K A+ Q PV D+A + K + +EA G ++ F EL++ GYP Sbjct: 1 MKAAVVQAEPVWFDLAKTVEKTCKLIKEAASNGAQIVAFPELWLPGYPTWIWQVIIWRIM 60 Query: 53 --PEDLVFKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA- 105 P DL +I+ S I ++S + + VGF V + +D+ Sbjct: 61 ARPMDLEMSVKYIKNSMRVDSEEIQAIQSCAAENNIVVCVGFSESCGGSVYIAQCTIDSN 120 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFI---SGYSNDPIVFRDI-RLGILIC---EDI 153 G I+ R K+ FH +RT G S D + + R+G L C EDI Sbjct: 121 GEILMTRRKLK-----PFHIERTLFGDGGGKSLDNVASTTVGRVGQLSCGVREDI 170 >gi|328857635|gb|EGG06751.1| hypothetical protein MELLADRAFT_116454 [Melampsora larici-populina 98AG31] Length = 708 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 118/588 (20%), Positives = 208/588 (35%), Gaps = 131/588 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + I+ LN D GN + + A L + EL I GY D + Sbjct: 1 MAHPVTISTCSLNQWALDFEGNHNRILESIRIAKAAQSRLRIGPELEIPGYGCFDHFLES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 + + L H I+ VG P + + N ++ I+ VR K+ + Sbjct: 61 DTVTHSWEVLAKLL--VHPDTLEILCDVGMPVMHKNVLYNCRILFFNSKIVLVRPKMWMA 118 Query: 119 NYSEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDI 153 N + E R F ++G + PI + D +GI CE++ Sbjct: 119 NDGNYRELRYFSPWAETRKVEEFVLPKFIRLLTGQTTVPIGNAIVMTEDSSIGIESCEEL 178 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-D 212 + ++ + +G E + + +AS + KL R +++ +Y NQ G D Sbjct: 179 FTPNSPHIGMSLEGVEIILNSSASHHELRKLHTRIDLIKEATLKSGGAYVYANQKGCDGD 238 Query: 213 ELIFDGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYDQQLSQWNYMSDDSAST------- 264 L +DG S Q+ Q FS Q+ + D QL + + ++ +S S+ Sbjct: 239 RLYYDGCSL-ISLNGQIISQGSQFSLQDIEVVTTTIDLQLIRSHRINKNSRSSQASRSFE 297 Query: 265 ------MYIPLQ------------EEEADYN----------ACVLSLRDYVQKNNFHKVI 296 +++ ++ E E Y+ AC L DY++++ Sbjct: 298 HHQFDRVWVNMELGSFDPNVKVGNENEVRYHTPEEEIALGPACW--LWDYLRRSGMRGFF 355 Query: 297 IGLSGGIDS--------ALCAAIAVDA-LGKENV-------------------------- 321 + LSGGIDS ++C + +A LG + + Sbjct: 356 VPLSGGIDSCATSMIVYSMCLLVTREARLGNQQMIEDARRIVGGSKDYIPLDSKEFCNRI 415 Query: 322 -QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP------ 374 T + + +SP++ + A A +G + L + +V L + P Sbjct: 416 FHTCYMGTENSSPETRKRAKDLALDIGAYHLDLHMDTVVTAILFLFTLVTLRTPLFKING 475 Query: 375 ----SGIVAENIQSRIRGNILMALSNHSKAML------------LTTSNKSEISVGYGTL 418 + +NIQ+R+R M LS +L L ++N E GY T Sbjct: 476 GTSTENLALQNIQARLR----MLLSYMFAQLLPWVRGLDGGLLVLGSANVDESLRGYMTK 531 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 Y S NP+ + KT + + + L + +P + LE Sbjct: 532 YDCSSADINPIGGISKTDLKRFIGFAEKKFELPILNQFLDAVPTAELE 579 >gi|292487596|ref|YP_003530468.1| aliphatic amidase [Erwinia amylovora CFBP1430] gi|292898835|ref|YP_003538204.1| carbon-nitrogen hydrolase [Erwinia amylovora ATCC 49946] gi|291198683|emb|CBJ45792.1| putative carbon-nitrogen hydrolase [Erwinia amylovora ATCC 49946] gi|291553015|emb|CBA20060.1| Aliphatic amidase [Erwinia amylovora CFBP1430] Length = 262 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 4/94 (4%) Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIW 154 V+N++V++ G IIA DK++L + E R+ +G P+V D I +G++IC DI Sbjct: 92 VVNALVVIRQGRIIARYDKLHLYDAFTLQESRSVTAGDGIPPLVDVDGINVGLMICYDI- 150 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 + + + L GA+ L + S + LK+ H Sbjct: 151 RFPELARRLVLDGADLL--VLPSAWVRGPLKEMH 182 >gi|268591473|ref|ZP_06125694.1| nitrilase family protein [Providencia rettgeri DSM 1131] gi|291313127|gb|EFE53580.1| nitrilase family protein [Providencia rettgeri DSM 1131] Length = 343 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 20/147 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF--- 58 L+ K A Q PV D + K R EEA G L+ F E+FISGYP V Sbjct: 4 LQTFKAAAVQAAPVFLDTNATVDKVCRLIEEAADNGAKLVAFPEVFISGYPYWSWVMNPI 63 Query: 59 --KKSFIQACSSAIDTLKSDTHDGGAG-------IVVGFPRQDQEGVL----NSVVILDA 105 F + C SAI+ + +V+G ++ G+ V I D Sbjct: 64 DGSPWFEKLCKSAIEVPGPEIQKIAQAAARHHINVVIGVNERNPNGIATLYNTLVTISDE 123 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISG 132 G I+ K+ +P ++ EK T+ +G Sbjct: 124 GRILGRHRKL-VPTWA---EKLTWANG 146 >gi|219125435|ref|XP_002182987.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405781|gb|EEC45723.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 307 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 6/160 (3%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSFIQACSSAIDTLK 74 D++G +A RA E A RQG +L+L EL+ + Y E ++ + + I ++ Sbjct: 23 DVSGFCFRAERAIELAVRQGANLVLLPELWNAPYFCQSQEAILMDLADPVENNVLIRRMQ 82 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGY 133 + V + + NSVV++DA G+++ K ++P+ + + EK F G Sbjct: 83 RLAQIYNVVLPVSIFERKNNALYNSVVVIDADGSLLGTYRKSHIPDGTGYQEKFYFTPGD 142 Query: 134 SNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 + + + ++G+ IC D W + L QGA+ L Sbjct: 143 TGFRVFDTKVGKVGVAICWDQWF-PEAARALALQGADVLL 181 >gi|310792419|gb|EFQ27946.1| carbon-nitrogen hydrolase [Glomerella graminicola M1.001] Length = 365 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I Q P VGDI N+ +A +AN +DL++ EL +GY + L F++ Sbjct: 1 MRIGCLQFAPQVGDIDNNLNRADSCLSKANTDDLDLLVLPELAFTGYNFKSLQQISPFLE 60 Query: 65 ACSSAIDTLKSDTH--DGGAGIVVGFPRQ 91 S I +L + T +VVG+P + Sbjct: 61 PSGSGITSLWARTTALKYNCNVVVGYPEK 89 >gi|291557023|emb|CBL34140.1| Predicted amidohydrolase [Eubacterium siraeum V10Sc8a] Length = 294 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 17/235 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + +K+A+ QL P ++ GNIAK +A E+A G D+ LF E++ GY P + Sbjct: 1 MNNVKVALLQLLPEE-NLQGNIAKGIKAVEKAAAMGADIALFPEMWSCGYCFPQDKTALD 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDA-GNIIAVRDKIN 116 + S T D + V + ++++G NSV + D G K++ Sbjct: 60 SLAVSHESEYTMTFAKAARDNDIAVAVTYLMKNEQGGAPYNSVTLFDRHGKERFTYSKVH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 ++ + + + + + + +D + +G +IC D + + L +G+E + Sbjct: 120 TCDFG-YEKVLSHGTDFYTAQLDIKDGNVNVGAMICYD-REFPESARILMLKGSEIILVP 177 Query: 175 NASPYYHNKLK----KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 NA P N++ + +E +TG I+ + P Y FDG ++ DG Sbjct: 178 NACPMEINRISQLRARAYENMTG-IATANYP--YGTPDCNGHSTAFDGIAYRMDG 229 >gi|149190680|ref|ZP_01868947.1| carbon-nitrogen hydrolase family protein [Vibrio shilonii AK1] gi|148835446|gb|EDL52416.1| carbon-nitrogen hydrolase family protein [Vibrio shilonii AK1] Length = 260 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 9/153 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKS 61 +KI+I Q + V D N+ + + E G D+IL ELF +GY P+D+ Sbjct: 1 MKISIVQTDVVYKDKHQNLLQVAQLLSETQEVG-DVILLPELFSTGYIFDSPQDIHELCE 59 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 Q S I+TL+ + IV G + NSV ++D+ + KI+ N Sbjct: 60 EYQH-SPTIETLQQLAATYQSVIVAGIAEHHEGCFYNSVAVIDSAGLQHRYRKISQTNI- 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 +K+ F G S ++ G+ IC D+W Sbjct: 118 ---DKQYFSRGDSLLTFEYQGYVFGVAICFDLW 147 >gi|313894320|ref|ZP_07827885.1| protein ExsB [Veillonella sp. oral taxon 158 str. F0412] gi|313441144|gb|EFR59571.1| protein ExsB [Veillonella sp. oral taxon 158 str. F0412] Length = 229 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K I+ SGG+DS C A+A++ GK+NV + + Y + LE A A + G + Sbjct: 5 QKAIVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAVAILEYYGIEGKT 64 Query: 353 LPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + + L SL++Q +E P G E ++ G + Sbjct: 65 MDVTKLFAFSNCSLLTQSSEEIPQGSYKEQQEAEGEGTV 103 >gi|313884737|ref|ZP_07818492.1| NAD+ synthase [Eremococcus coleocola ACS-139-V-Col8] gi|312619998|gb|EFR31432.1| NAD+ synthase [Eremococcus coleocola ACS-139-V-Col8] Length = 274 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 35/242 (14%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCA---AIAVDALGKENVQT------IMLPYKYTS 332 ++ Y+ F K +++G+SGG DS L + V+ L +E Q I LPY Sbjct: 31 MKQYLMDRPFLKSLVLGISGGQDSTLAGRLCQLTVEELRQETGQADYRFIAIRLPYGL-- 88 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNI 390 Q+ ED A A L I+ + + E + S NI++R R Sbjct: 89 -QADEDDAQMALDFIQADQELTINIKAATDAVVAAVEANEGMKISDFNKGNIKARQRMIA 147 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ ++ +++ T + +E G+ T +GD + PL L K+Q QL ++ + Sbjct: 148 QYAVAGDNQGLVVGTDHAAEAITGFYTKFGDGAADIMPLWRLNKSQGRQLLAYLEA---- 203 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDD--IIKRIVENEESFI 504 P ++ EK P+A+L +P D+++L Y +DD I K I + E I Sbjct: 204 ----------PKALYEKVPTADLEEDKPQLPDEQALGVSYQAIDDYLIGKAIADKEAERI 253 Query: 505 NN 506 + Sbjct: 254 ED 255 >gi|192291049|ref|YP_001991654.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris TIE-1] gi|192284798|gb|ACF01179.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris TIE-1] Length = 579 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 11/158 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + LK+A Q P++ + N+A+ EEA G LI+ E+ +GY D Sbjct: 1 MSQLLKVATVQFEPIMAEKERNVARLLELCEEAAVGGAKLIVTPEMGTTGYCWYDRAEVA 60 Query: 61 SFIQAC---SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKIN 116 F++ ++A + HD IVVG P D++G+ NS V++ +I K Sbjct: 61 PFVEPIPGPTTARFAALARKHD--CYIVVGLPEVDEDGIYYNSAVLIGPEGLIGRHRK-- 116 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDI 153 + E + +G ++ + I R+ +LIC DI Sbjct: 117 --THPYISEPKWSAAGDLHNQVFDTPIGRIALLICMDI 152 >gi|237750596|ref|ZP_04581076.1| hydrolase [Helicobacter bilis ATCC 43879] gi|229373686|gb|EEO24077.1| hydrolase [Helicobacter bilis ATCC 43879] Length = 273 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 14/213 (6%) Query: 25 KARRAREEANRQGMDLILFTELFISGYPPEDLVFKK-SFIQACSSAIDTLKSDTHDGGAG 83 K ++A EA++ +LIL EL + Y + K SF Q + + + G Sbjct: 4 KTKQAIIEASKNA-ELILLQELHATQYFCQSEETKYLSFAQDFDENVAFFSTIAKECGVA 62 Query: 84 IVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVF 140 +V Q G+ N+ V+ + G+I K+++P+ +F+EK F G +PI Sbjct: 63 LVTSLFEQRARGLYHNTAVVFEKDGSIAGKYRKMHIPDDPQFYEKFYFTPGDLGFNPIKT 122 Query: 141 RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY--------HNKLKKRHEIVT 192 LG+L+C D W + + GA+ L A ++ +L+ I Sbjct: 123 SVGNLGVLVCWDQW-FPEAARIMALNGADMLIYPTAIGWFDADCEAEKKRQLEAWQTIQR 181 Query: 193 GQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 G LP+ +N+VG + L +G F G Sbjct: 182 GHAIANGLPLASINRVGFEPNLQAEGEGIRFFG 214 >gi|218131088|ref|ZP_03459892.1| hypothetical protein BACEGG_02693 [Bacteroides eggerthii DSM 20697] gi|317477026|ref|ZP_07936268.1| carbon-nitrogen hydrolase [Bacteroides eggerthii 1_2_48FAA] gi|217986792|gb|EEC53125.1| hypothetical protein BACEGG_02693 [Bacteroides eggerthii DSM 20697] gi|316906819|gb|EFV28531.1| carbon-nitrogen hydrolase [Bacteroides eggerthii 1_2_48FAA] Length = 294 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 110/273 (40%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+ I Q V D+ N+ ++ E G L++ EL S Y Sbjct: 1 MRKIKVGIIQ-QANVADMRTNLMNLAKSIEACAAHGAQLVVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ + G+ Sbjct: 50 FCQTENTQLFDLAEPIPGPSTGFYSELAAANNIVLVTSLFEKRAPGLYHNTAVVFERDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDLGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE----- 213 GAE L A + + K ++ + + Q H LP+I VN+VG + + Sbjct: 169 GAELLIYPTAIGWESSDTDDEKSRQLNAWIISQRGHAVANGLPVISVNRVGHEPDPSMQT 228 Query: 214 --LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++F G SF Q + Q + +N + E Sbjct: 229 NGILFWGNSFVVGPQGEFLAQAGNDQSENIVVE 261 >gi|329667854|gb|AEB93802.1| NH(3)-dependent NAD+ synthetase [Lactobacillus johnsonii DPC 6026] Length = 277 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 54/267 (20%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY+++N F K ++G+SGG DS L + A+ + +T + LPY + Sbjct: 31 LKDYLKENPFLKTYVLGISGGQDSTLTGKLCQMAIEEMREETGDKSYQFIAVRLPYGVQA 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQEEPSGIV---AENIQSRI 386 S A + P DL+ + M + ++ I NI++R Sbjct: 91 DASDAADAIAFQK--------PDQDLIVNIKEPVDAMVKVVEATGQKITDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ + ++ T + +E G+ T YGD + PL F+L R Sbjct: 143 RMVVQYAIAGANNGAVVGTDHAAENFSGFYTKYGDGAADITPL--------FRLDK-RQG 193 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEES 502 + LG P + EK+P+A+L RP D+ +L Y +DD ++ Sbjct: 194 KAMLKELG-----CPKHLYEKAPTADLEEDRPDLPDEVALGVTYKDVDDYLE-------- 240 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKR 529 ++ ++E +E L SE+KR Sbjct: 241 ----GKDVSEEAAEQIEKLWKKSEHKR 263 >gi|328886211|emb|CCA59450.1| hydrolase, carbon-nitrogen family [Streptomyces venezuelae ATCC 10712] Length = 280 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 12/185 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y PE Sbjct: 1 MTDVVRAALVQAT-WTGDTESMIAKHEEHAREAARQGAKVIGFQEVFNAPYFCQVQEPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRD 113 + + + + ++ + G IVV + EG N+ ++DA G+ + Sbjct: 60 YRWAEPVPDGPT--VSRMRDLARETGMVIVVPVFEVEGEGFYYNTAAVIDADGSYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G + P+ + R+G+ IC D + L GA+ ++ Sbjct: 118 KHHIPQVKGFWEKYYFRPGNAGWPVFDTAVGRVGVYICYDR-HFPEGWRQLGLNGAQLVY 176 Query: 173 SLNAS 177 + +A+ Sbjct: 177 NPSAT 181 >gi|299743166|ref|XP_001835582.2| hydrolase [Coprinopsis cinerea okayama7#130] gi|298405530|gb|EAU86153.2| hydrolase [Coprinopsis cinerea okayama7#130] Length = 309 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY 51 L KL++A+ QLNP +G + NI +AR +DLI F E+ +GY Sbjct: 5 LSKLRVAVVQLNPKLGQVQANIQRARELCSNLQPHTLDLICFPEMAFTGY 54 >gi|91784632|ref|YP_559838.1| Nitrilase (NitA) [Burkholderia xenovorans LB400] gi|40019168|emb|CAE92892.1| predicted amidohydrolase/nitrilase [Pseudomonas putida] gi|91688586|gb|ABE31786.1| Nitrilase (NitA) [Burkholderia xenovorans LB400] Length = 331 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP----EDLV 57 + K K+A Q P ++ + KA R EEA + G LI F E+++ GYP + Sbjct: 6 IAKYKVAAVQAAPEFLNLDKGVEKAVRLIEEAAKNGAKLIAFPEVWLPGYPWWIWLDSPA 65 Query: 58 FKKSFIQ--------ACSSAIDTLKSDTHDGGAGIVVGF-PRQDQEGVLNSVVILDAGNI 108 + F+Q S + L + + +V+GF RQD + +I D G + Sbjct: 66 WGMQFVQRHFENALLVGSPQWERLCAAAAEHRIFVVLGFCERQDGTLYIAQAIIDDEGRV 125 Query: 109 IAVRDKINLPNYSE 122 ++ R K+ P ++E Sbjct: 126 VSTRRKLK-PTHAE 138 >gi|288958901|ref|YP_003449242.1| aliphatic nitrilase [Azospirillum sp. B510] gi|288911209|dbj|BAI72698.1| aliphatic nitrilase [Azospirillum sp. B510] Length = 306 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 71/173 (41%), Gaps = 31/173 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP-------EDLVF 58 K+ I Q P + D+A IA AR A +A G DLI+F E ++ GYP D Sbjct: 3 KLHIVQDTPPLLDLAAGIAMARTAIRDAAEDGADLIVFPETWLGGYPSWVFGMAGWDSAE 62 Query: 59 KKSFIQACSSAIDTLKSD--------THDGGAGIVVGF---PRQDQEGVLNSVVILDA-G 106 +S+ A L S D G +V+G R + NS+V + G Sbjct: 63 ARSWFGRLVEASLVLDSPQGAVLCEAARDAGITVVMGVNERARASSATIFNSLVTIGPDG 122 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIW 154 I+ V K+ LP ++E I D R + R+G L+C + W Sbjct: 123 RILNVHRKL-LPTHTE------RIVWAPGDGAGLRAVATPAGRIGGLVCWEHW 168 >gi|42519608|ref|NP_965538.1| NAD synthetase [Lactobacillus johnsonii NCC 533] gi|81703794|sp|Q74I36|NADE_LACJO RecName: Full=NH(3)-dependent NAD(+) synthetase gi|41583897|gb|AAS09504.1| NH(3)-dependent NAD+ synthetase [Lactobacillus johnsonii NCC 533] Length = 277 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 54/267 (20%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY+++N F K ++G+SGG DS L + A+ + +T + LPY + Sbjct: 31 LKDYLKENPFLKTYVLGISGGQDSTLTGKLCQMAIEEMREETGNKSYQFIAVRLPYGVQA 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQEEPSGIV---AENIQSRI 386 S A + P DL+ + M + ++ I NI++R Sbjct: 91 DASDAADAIAFQK--------PDQDLIVNIKEPVDAMVKVVEATGQKITDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ + ++ T + +E G+ T YGD + PL F+L R Sbjct: 143 RMVVQYAIAGANNGAVVGTDHAAENFSGFYTKYGDGAADITPL--------FRLDK-RQG 193 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEES 502 + LG P + EK+P+A+L RP D+ +L Y +DD ++ Sbjct: 194 KAMLKELG-----CPKHLYEKAPTADLEEDRPDLPDEVALGVTYKDVDDYLE-------- 240 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKR 529 ++ ++E +E L SE+KR Sbjct: 241 ----GKDVSEEAAEQIEKLWKKSEHKR 263 >gi|260575139|ref|ZP_05843140.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodobacter sp. SW2] gi|259022761|gb|EEW26056.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodobacter sp. SW2] Length = 260 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 14/187 (7%) Query: 37 GMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV 96 G D+++ ELF+ GY + V + Q + L T G G+ +GF + + Sbjct: 38 GADMLVAPELFLPGYNAD--VAGLAQPQGGEWHLR-LAEMTRAAGCGLTLGFAEAAGDAL 94 Query: 97 LNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK 155 NS + LDA G +A KI L E F G + + ++ +LIC DI Sbjct: 95 FNSAICLDATGRHLAHYRKIQLFGP---REAALFRPGKAYETFTLAGVKCALLICYDIEF 151 Query: 156 NSNICKHLKKQGAEFLF--SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 ++ L G + + + N PY H V ++ + I+Y N G + + Sbjct: 152 APHVAA-LAALGVQVILVPTANMLPYTH----VSSATVPAMAANHGVAIVYANMCGTEGD 206 Query: 214 LIFDGAS 220 L + G S Sbjct: 207 LSYAGGS 213 >gi|121534526|ref|ZP_01666349.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosinus carboxydivorans Nor1] gi|121307019|gb|EAX47938.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosinus carboxydivorans Nor1] Length = 258 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 18/175 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARR-----AREEANRQGMDLILFTELFISGYPPEDLVFK 59 ++IA+ Q+ IAG +A+ RR A+E A R D+++ E++ +GY ++ Sbjct: 1 MRIALVQMKV----IAGAVAENRRRGLALAQEGAARA--DVVVLPEIWTTGYALREVDKW 54 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 ++ + I + + + GA I+ G P + V N V++ GN+ A KI+L Sbjct: 55 AEDVEGLT--ISEMSNISRKYGAYIIAGSIPLRKNGKVYNGAVVIGPDGNVAAEYRKIHL 112 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 +S E+R F +G + + GI IC D+ + + + L GA+ +F Sbjct: 113 --FSMMGEERFFAAGDRRCTFNLKGVTAGIAICYDL-RFPELFRVLALDGAQIVF 164 >gi|29828492|ref|NP_823126.1| hydrolase [Streptomyces avermitilis MA-4680] gi|29605595|dbj|BAC69661.1| putative hydrolase [Streptomyces avermitilis MA-4680] Length = 280 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 28/287 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ A+ Q GD I +A +A QG ++ F ELF Y + V K Sbjct: 1 MSRVIRAAVFQ-TAWTGDKESMIQVHEQAVRDAAAQGAQVLCFQELFYGPYFCQ--VQDK 57 Query: 61 SFIQAC-----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRD 113 +F + + ++ + G +V+ ++Q GVL N+ ++DA G+ + Sbjct: 58 AFYEYAEQIPHGPIVKRFQALARELGIVLVLPMYEEEQPGVLYNTAAVIDADGSYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G S P+ + R+G+ IC D + L GAE +F Sbjct: 118 KTHIPQVEGFWEKFYFRPGNSGWPVFDTAVGRIGVYICYDR-HFPEGWRALGLAGAEIVF 176 Query: 173 SLNASPY----YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + +A+ Y +L++ V + + + V ++G D F G S+ D + Q Sbjct: 177 NPSATSRGLSGYLWQLEQPAAAVANEYFVGAINRVGVEELGDND---FYGTSYFVDPEAQ 233 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD------DSASTMYIPL 269 ++ E + D L++ + D D A Y PL Sbjct: 234 FVGEVASDKETELVVR---DLDLAKLREVRDRWQFYRDRAPGAYGPL 277 >gi|52840263|ref|YP_094062.1| hydrolase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627374|gb|AAU26115.1| probable hydrolase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 285 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 11/138 (7%) Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPI-VFRDIRLGILIC 150 ++ G +V G +IAV K ++P+ ++HE F G SN P+ LG+ C Sbjct: 97 EKAGYNTAVAFNPQGELIAVTRKQHIPSGEKYHENFYFKPGNSNYPVHTIAGHYLGLPTC 156 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNA------SPYYHNK-LKKRHEIVTGQISHVHLPII 203 D W + + +GAE L A +P + ++ + ++ + G +S+ II Sbjct: 157 YDQW-FPELSRIYGLKGAEILVYPTAIGGEPTAPGFDSQPMWQKVMVAQGIMSNTF--II 213 Query: 204 YVNQVGGQDELIFDGASF 221 VN++G +D L F G+SF Sbjct: 214 AVNRIGCEDGLSFYGSSF 231 >gi|254447968|ref|ZP_05061432.1| N-carbamoylputrescine amidase [gamma proteobacterium HTCC5015] gi|198262394|gb|EDY86675.1| N-carbamoylputrescine amidase [gamma proteobacterium HTCC5015] Length = 282 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSND----PIVF----RDIRLGIL 148 N+ V+LD GNI K+++P+ F EK F G + + PI R I+LG+L Sbjct: 80 NTAVVLDQRGNIAGRFRKMHIPHDPGFEEKYYFTPGDAREDGFEPIAIEIDGRPIKLGLL 139 Query: 149 ICEDIWKNSNICKHLKKQGAEFLFSLNASPY-----YHNKLKKRHEIVTGQISHV---HL 200 +C D W + + +GA+ L A + + ++ H +T Q SH L Sbjct: 140 VCWDQWY-PEAARIMALKGADLLIYPTAIGWDPEDTQSEQQRQLHAWLTIQRSHAVANGL 198 Query: 201 PIIYVNQVG 209 P++ N+VG Sbjct: 199 PVVSANRVG 207 >gi|149173695|ref|ZP_01852324.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Planctomyces maris DSM 8797] gi|148847225|gb|EDL61559.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Planctomyces maris DSM 8797] Length = 245 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/153 (20%), Positives = 64/153 (41%), Gaps = 5/153 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K+ +A QL V D+ ++AK + +A+ QG L+ F E ++ GY ++++ ++ Sbjct: 1 MKNKITVAACQLFDVQDDLEQSLAKIKEYATQASEQGAALVCFPESYLQGYTTKEILARE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + S + +V+GF + + S ++ G ++ K L Sbjct: 61 RALDISSDRFTDILKRLESLQPTLVIGFIEKAGTQLFISAAVVRQGTLLGCYRKTRLA-- 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 +R F G +R G+ IC ++ Sbjct: 119 ---PGERLFDPGTETPTFEVEGLRFGVNICYEL 148 >gi|257458876|ref|ZP_05623999.1| N-carbamoylputrescine amidase [Campylobacter gracilis RM3268] gi|257443864|gb|EEV18984.1| N-carbamoylputrescine amidase [Campylobacter gracilis RM3268] Length = 416 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 11/122 (9%) Query: 98 NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ + IA + K+++P+ +F+EK F G +PI RLG+L+C D W Sbjct: 98 NTAVVFERDGTIAGKYRKMHIPDDPQFYEKFYFTPGDLGFEPIDTSVGRLGVLVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GAE L A ++ K ++ V Q H LP+I VN+ Sbjct: 157 YPEAARAMALRGAELLIYPTAIGWFDGDGEDEKARQLEAWVAVQRGHAVANSLPVIAVNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|242239474|ref|YP_002987655.1| NAD synthetase [Dickeya dadantii Ech703] gi|242131531|gb|ACS85833.1| NAD+ synthetase [Dickeya dadantii Ech703] Length = 273 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 43/232 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--------IMLPYKYTSP 333 L++Y++ N F K +++GLSGG DS L + A+ + +T + LPY + Sbjct: 30 LKNYLKANPFAKSLVLGLSGGQDSTLTGKLCQTAITELRQETGREYQFIAVRLPYGVQA- 88 Query: 334 QSLEDAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 D C A+ ++ P D Q + E S V N ++R Sbjct: 89 ----DEQDCQDAINFIQPDRVLTVNIKPAVDASEATL----QAIGIELSDFVKGNEKARE 140 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NP+ L K R Sbjct: 141 RMKAQYSIAGMNAGLVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQG 191 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P + K+P+A+L RP D+ +L Y +DD ++ Sbjct: 192 KALLKLLG-----CPSHLYTKAPTADLEDDRPALPDEAALGITYEKIDDYLE 238 >gi|107026719|ref|YP_624230.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia AU 1054] gi|116692090|ref|YP_837623.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia HI2424] gi|105896093|gb|ABF79257.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia AU 1054] gi|116650090|gb|ABK10730.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia HI2424] Length = 281 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 21/228 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKKSFI 63 +++ +AQL+ V GD+A N K E + G LI+F E +SG+P + + Sbjct: 1 MQVELAQLSLVDGDVAHNTRKVIDTIERVDVAGGTKLIVFPETTLSGFP------TRENV 54 Query: 64 QACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + +D ++ G + VG +D N+ V++D G+II K +L Sbjct: 55 AEVAETLDGPRLLAVRDAARRTGVAVAVGLAERDGGRFYNTTVLVDERGDIILRYRKTHL 114 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + F G + + +G+LIC DI + + + A+ L N + Sbjct: 115 ----WASDVGVFTPGDRFATCAWNGLTVGLLICYDI-EFPETARAIGALDADLLIVTNGN 169 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFD 224 + +R + + + + VN+ G G D+L F G S D Sbjct: 170 MDPFGPVHRRA--IAARAMENQMFAVMVNRCGAGDDDLTFAGLSTLVD 215 >gi|238923044|ref|YP_002936557.1| amidohydrolase, putative [Eubacterium rectale ATCC 33656] gi|238874716|gb|ACR74423.1| amidohydrolase, putative [Eubacterium rectale ATCC 33656] Length = 280 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 6/149 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 K+AI Q + I NI A EEA+ + D++L E FI+GY + ++KS I Sbjct: 2 FKVAILQKRSINEQIDKNIETIIMAMEEASEKHADILLLPECFITGYDLP-MSYEKS-IA 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVV-GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 I + + G+V+ F + ++ ++ VI +GNI+ K++ +F Sbjct: 60 DNDIRIAQICENAKKYKIGVVLTAFTKGSKQPQNSAFVINKSGNILMKYSKVHT---CDF 116 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICED 152 ++R SG F I+LGI+IC D Sbjct: 117 ADERDVESGKEFKVCDFEGIQLGIMICYD 145 >gi|237731249|ref|ZP_04561730.1| NAD synthetase [Citrobacter sp. 30_2] gi|226906788|gb|EEH92706.1| NAD synthetase [Citrobacter sp. 30_2] Length = 276 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 42/262 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A+ G + +Q + LPY + Sbjct: 30 LKSYLQTYPFLKSLVLGISGGQDSTLAGKLCQMAISELREETGNDALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NP+ L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPIFRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ 508 + LG P + +K+P+A+L + D+ SLP L +N + ++ + Sbjct: 196 -LAALG-----CPEHLYKKAPTADL---EDDRPSLPDEAALG----VTYDNIDDYLEGKK 242 Query: 509 EYNDETVRYVEHLLYGSEYKRR 530 D + +E +E+KRR Sbjct: 243 LAAD-IAKKIEGWYLKTEHKRR 263 >gi|161519992|ref|YP_001583419.1| NAD synthetase [Burkholderia multivorans ATCC 17616] gi|160344042|gb|ABX17127.1| NAD+ synthetase [Burkholderia multivorans ATCC 17616] Length = 325 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 32/228 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ ++G+SGG+DS+ A +AV+ L E + + P ++ D Sbjct: 69 LAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLAVERLRGEGYDARFIAMRL--PNGVQND 126 Query: 339 AAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 127 EADAQRALAFVRADEVLTVDVKPAADAMLKSLIASGHAFDTPAQQDFVHGNIKARERMIA 186 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + +++ T + +E +G+ T +GD PL L K +V + Sbjct: 187 QYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADILPLAGLNKRRV---------RAVA 237 Query: 451 SGLGPLTEV---IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 LG V +P + LE ELRP + D+ + Y +DD ++ Sbjct: 238 RALGAEDAVVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDDFLE 280 >gi|311697156|gb|ADQ00028.1| protein containing nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase domain [marine bacterium HP15] Length = 386 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 7/151 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KL A Q+ VGD++ N+ A + EA R G LI E F S P++ + + + Sbjct: 52 KLNAAAIQMQTRVGDVSHNLGLAEKMVREAARSGARLIALPEFFTSAITPDERPY-AAVL 110 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + A+ LK + I ++D + N V ++ + + DK ++P E Sbjct: 111 SAHNHAVSLLKRLASELDIWIGGSLLQEDHGEIYNRYVFVEPNHRLHTHDK-DIPTMWE- 168 Query: 124 HEKRTFISGYSNDPIVFRDIR-LGILICEDI 153 F G ++D ++ D+ +G +C ++ Sbjct: 169 ---NAFYVGGTDDGVMQSDLGVVGAAVCWEL 196 >gi|253568295|ref|ZP_04845706.1| beta-ureidopropionase [Bacteroides sp. 1_1_6] gi|251842368|gb|EES70448.1| beta-ureidopropionase [Bacteroides sp. 1_1_6] Length = 294 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 109/273 (39%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+K+ + Q + DI N+ ++ E G LI+ EL S Y Sbjct: 1 MKKIKVGLIQQSNT-ADIRVNLMNLAKSIEACAAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTNLFDLAEPIPGPSTGFYSELAAANKVVLVASLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFL-----FSLNASPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQVG------GQD 212 GAE L +S K ++ + + Q +H LP+I VN+VG GQ Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSGQT 228 Query: 213 ELI-FDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 I F G SF Q + Q + +N + E Sbjct: 229 NGIQFWGNSFVAGPQGEFLAQASNDHPENMVVE 261 >gi|271967834|ref|YP_003342030.1| carbon-nitrogen hydrolase [Streptosporangium roseum DSM 43021] gi|270511009|gb|ACZ89287.1| putative carbon-nitrogen hydrolase [Streptosporangium roseum DSM 43021] Length = 264 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 20/192 (10%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLV--FKKS 61 +IA+ Q+ PV + A N+ AR A E A G DL +F E ++ Y DL Sbjct: 3 RIALCQI-PVSEEPAANLRSAREALERAATDGADLAIFPEATLTRYGRRITDLAEPLDGP 61 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVV-ILDAGNIIAVRDKINLPNY 120 F+ L G ++ G + V N+ V I G I A KI+L + Sbjct: 62 FVTG-------LAESARAHGLAVIAGVFEPGEGRVHNTAVAIGPGGGIEAAYRKIHL--F 112 Query: 121 SEFHEKRTFISGYSNDPIV--FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F + + + P+V +R+G++ C DI + + + L QGA+ LF++ A+ Sbjct: 113 DSFGARESELVAPGGTPVVVELAGLRVGLVTCYDI-RFPELTRALVDQGAD-LFAVIAA- 169 Query: 179 YYHNKLKKRHEI 190 + +K+ H + Sbjct: 170 WGSGPMKEEHWV 181 >gi|226357337|ref|YP_002787077.1| hydrolase [Deinococcus deserti VCD115] gi|226319327|gb|ACO47323.1| putative hydrolase [Deinococcus deserti VCD115] Length = 297 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 19/258 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKK 60 +K+A Q++ V + N+A+A +A RQG ++L ELF + Y ED Sbjct: 8 VKLAAVQMH-VTDQLEDNVARAEAHVRDAARQGAQVVLLPELFENLYFCQVEREDYFGLA 66 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 I+ I ++ + G + + + + NS+V +DA G+++ K ++P+ Sbjct: 67 HPIEG-HPFIGRFQNLAQELGVVLPLSYFEAAGQAHYNSLVCIDADGSLLGNYRKTHIPD 125 Query: 120 YSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF---SLN 175 + EK F G + I R R+G+ IC D W + + QGA+FL ++ Sbjct: 126 GPGYEEKYYFNPGDTGFKIWPTRYGRVGVGICWDQWY-PETARVMMLQGADFLLYPTAIG 184 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYV---NQVG----GQDELIFDGASFCFDGQQQ 228 + P H + H YV N++G G E + G +F D + Sbjct: 185 SEPAEVETPNSHHMWQRAMVGHAVSNSTYVGAANRIGTERVGDLEQTYYGHTFVSDYTGE 244 Query: 229 LAFQMKHFSEQNFMTEWH 246 + ++ E + + H Sbjct: 245 IVAELGEQEEGALVHDLH 262 >gi|29346285|ref|NP_809788.1| beta-ureidopropionase [Bacteroides thetaiotaomicron VPI-5482] gi|298385644|ref|ZP_06995202.1| glycosyl hydrolase, family 10 [Bacteroides sp. 1_1_14] gi|29338180|gb|AAO75982.1| beta-ureidopropionase [Bacteroides thetaiotaomicron VPI-5482] gi|298261785|gb|EFI04651.1| glycosyl hydrolase, family 10 [Bacteroides sp. 1_1_14] Length = 294 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+K+ + Q + DI N+ ++ E G LI+ EL S Y Sbjct: 1 MKKIKVGLIQQSNT-ADIRVNLMNLAKSIEACAAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTNLFDLAEPIPGPSTGFYSELAAANKVVLVASLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVG------GQD 212 GAE L A + + K ++ + + Q +H LP+I VN+VG GQ Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSGQT 228 Query: 213 ELI-FDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 I F G SF Q + Q + +N + E Sbjct: 229 NGIQFWGNSFVAGPQGEFLAQASNDHPENMVVE 261 >gi|90412648|ref|ZP_01220650.1| NAD(+) synthetase [Photobacterium profundum 3TCK] gi|90326456|gb|EAS42868.1| NAD(+) synthetase [Photobacterium profundum 3TCK] Length = 278 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 39/231 (16%) Query: 295 VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTSPQSLEDAA----- 340 +++G+SGG+DS C A +AV+ L E+ + + LPY + A Sbjct: 40 IVLGISGGVDSTTCGRLAQLAVNGLNDESNSSTYQFIAVRLPYGEQHDEHEAQMALSFIK 99 Query: 341 -ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG---IVAENIQSRIRGNILMALSN 396 + + ++ K V IH + F+L L + V N+++R R ++ Sbjct: 100 PSHSVSVNIKDGVDGIH--ASTLFALKDTGLTPKSDAKIDFVKGNVKARSRMIAQYEIAG 157 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++L T + +E G+ T +GD + PL L K QV +AS + Sbjct: 158 LVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLIASKLGA---------- 207 Query: 457 TEVIPPSILEKSPSA---ELRPHQTDQES-LPPYPILDDIIK-RIVENEES 502 P +++K P+A EL P + D+++ L Y +DD ++ + V++E S Sbjct: 208 ----PDVLVKKVPTADLEELAPQKADEDALLVSYDQIDDFLEGKAVDSEVS 254 >gi|14590532|ref|NP_142600.1| hypothetical protein PH0642 [Pyrococcus horikoshii OT3] gi|3257050|dbj|BAA29733.1| 262aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 262 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 14/173 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLVFKKSF 62 +K+ Q+ P + ++ N +KA + +EA+++G L++ ELF +GY E + VF + Sbjct: 2 VKVGYIQMEPKILELDKNYSKAEKLIKEASKEGAKLVVLPELFDTGYNFESREEVFDVAQ 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 L + G IV G + + NS V++ I KI+L Sbjct: 62 QIPEGETTTFLMELARELGLYIVAGTAEKSGNYLYNSAVVVGPRGYIGKYRKIHL----- 116 Query: 123 FHEKRTFIS----GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+ ++ F G+ I F ++G++IC D W + L +GAE + Sbjct: 117 FYREKVFFEPGDLGFKVFDIGF--AKVGVMICFD-WFFPESARTLALKGAEII 166 >gi|268316893|ref|YP_003290612.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Rhodothermus marinus DSM 4252] gi|262334427|gb|ACY48224.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Rhodothermus marinus DSM 4252] Length = 268 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 24/179 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGM--DLILFTELFISGY---PPEDLVFK 59 +++A Q NP I N+ + EA +G+ DLI+ ELF SGY EDLV Sbjct: 1 MQVAYVQYNPAYLQITQNLKQV-----EALLEGIEADLIVLPELFASGYFFRSHEDLVAV 55 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 I + G +V G P +D + NS V + +I K++L Sbjct: 56 AEPIPE-GPTTQWMIEWCRKTGTVMVGGLPERDGDRFYNSAVAVGPEGLIGRYRKVHL-- 112 Query: 120 YSEFHEKRTFIS----GYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+E++ S G+ + R+ RLG++IC D W + L QGA+ + Sbjct: 113 ---FYEEKLHFSPGNLGFQVFEVADRNGQLYRLGVMICFD-WYFPEAARTLALQGADVI 167 >gi|119493924|ref|ZP_01624486.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lyngbya sp. PCC 8106] gi|119452322|gb|EAW33516.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lyngbya sp. PCC 8106] Length = 270 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 15/177 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N+A+A + A R+G +L+ E F G E L + + T Sbjct: 16 ELQKNLAEALELIDLAVRRGAELVCLPENFSFMGEEAEKLAQAREIAAQTEKFLHTTAQR 75 Query: 77 THDGGAGIVVGFPRQDQEG-VLNSVVILD-AGNIIAVRDKI-----NLPNYSEFHEKRTF 129 + GFP + G V N+ +++D +GN +A K+ NLP+ + + E T Sbjct: 76 FQV--TLLAGGFPVPSESGKVYNTALLIDPSGNELARYQKVHLFDVNLPDGNNYQESFTV 133 Query: 130 ISGYSNDPIVFRDIRLGIL---ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 ++G P V++ LG L +C D+ + + +HL QGAE LF A Y K Sbjct: 134 MAG-QQLPSVYKSEELGNLGLSVCYDV-RFPELYRHLSSQGAEVLFVPAAFTAYTGK 188 >gi|163841800|ref|YP_001626205.1| NAD synthetase [Renibacterium salmoninarum ATCC 33209] gi|29893217|gb|AAP03131.1| putative NAD+ synthetase [Renibacterium salmoninarum] gi|162955276|gb|ABY24791.1| NH(3)-dependent NAD(+) synthetase [Renibacterium salmoninarum ATCC 33209] Length = 273 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 46/277 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQT- 323 P + A+ V L DY + ++G+SGG+DS+L + A + L E + Sbjct: 16 PTIDPAAEVTKRVDFLVDYAKATRTKGFVLGISGGLDSSLAGKLGQLAAEKLRAEGLDAS 75 Query: 324 ---IMLPYKYTSPQSLEDAAAC----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY ++ AA ++ C +V P D + + + E+ S Sbjct: 76 FTAVRLPYNVQHDEADAQAALAFIQPDRSWTC--NVAPGVDGLEKEYKATTG---EQLSD 130 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 NI++R R AL+ +++ T + +E G+ T +GD PL L K Q Sbjct: 131 FNRGNIKARARMVAQYALAGEHGLLVIGTDHGAESVTGFFTKFGDGGADILPLFTLNKRQ 190 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDI 492 QL ++ + I +K P+A+L P + D++ L Y +DD Sbjct: 191 NRQLLTYLGA--------------AERIYQKVPTADLLDGVPGRADEDELGLSYDDIDDY 236 Query: 493 IKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 ++ +E +D +E + +KR Sbjct: 237 LE------------GREVSDAVAEAIEKRFLATRHKR 261 >gi|227542797|ref|ZP_03972846.1| NAD synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181423|gb|EEI62395.1| NAD synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 286 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 99/246 (40%), Gaps = 41/246 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT- 323 PL + + + V L DY+ ++G+SGG DS L A +AV+ L + T Sbjct: 28 PLIDSVKEVESRVTFLADYLSSTGLGSYVLGISGGQDSTLAGKLAQMAVEKLRESGTDTE 87 Query: 324 ---IMLPYKYTSPQSLEDAA--------ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 + LPY S + D A + DVL + + F + Sbjct: 88 FFAVRLPYGIQSDANDVDVALEFISPDHTLEINIKEGVDVLSDATAAALGMAHLGDFNK- 146 Query: 373 EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 N+++R R A++ + +++ T + +E G+ T +GD + PL L Sbjct: 147 -------GNVKARARMIAQYAVAGEHRGLVIGTDHAAENITGFFTKFGDGASDILPLWGL 199 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPI 488 K+Q +L + P S +K P+A+L RP D+E+L YP Sbjct: 200 NKSQGAELLRHMGA--------------PESTWKKVPTADLEEDRPALPDEEALGVTYPE 245 Query: 489 LDDIIK 494 +D ++ Sbjct: 246 IDAYLR 251 >gi|327542083|gb|EGF28578.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopirellula baltica WH47] Length = 317 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 22/232 (9%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K ++A+AQ+ + GD GN+ + A EEA+ +G +++ E + G+ V K+ Sbjct: 67 KVCRVAMAQIYCIDGDREGNLRRIENAVEEASAKGAEIVCLPETCLYGW-----VNAKAH 121 Query: 63 IQA---CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL-DAGNIIAVRDKINLP 118 A D L + VG ++ + + +SVV++ D G +I K+N+ Sbjct: 122 ELAHPIPGKDTDALSEIAKKNRVFLSVGLSEKEGDQLYDSVVLIDDEGELILKHRKMNVL 181 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL----FSL 174 + + G S D + + R+G+LIC D + + + + +Q L ++ Sbjct: 182 TH---LMSPPYTRGDSVDIVETKFGRVGMLICADTFHDETVQRMAGEQPDLLLVPYGWAA 238 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG-----QDELIFDGASF 221 NA + + R I + + PI+ N VG +I+ G S+ Sbjct: 239 NAGDWPQHGTSLRDTIARAAKT-IGCPIVGTNVVGSISGGPWQGMIYGGQSY 289 >gi|296877044|ref|ZP_06901085.1| NAD(+) synthase [Streptococcus parasanguinis ATCC 15912] gi|296431905|gb|EFH17711.1| NAD(+) synthase [Streptococcus parasanguinis ATCC 15912] Length = 274 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 36/258 (13%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDASYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE------EPSGIVAENIQSRIRGNIL 391 D A KAL + P LV + + ++ E S N+++R R Sbjct: 90 DEADAQKALTF---IQPDVSLVVNIKESADEMVRAVEATGTEVSDFNKGNMKARSRMIAQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 AL+ ++ T + +E G+ T +GD PL L K Q QL Sbjct: 147 YALAGARSGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNKRQGKQL---------LK 197 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 LG P++ EK P+A+L +E P I D++ + NE ++ + Sbjct: 198 ALGA-----DPALYEKIPTADL------EEEKP--GIADEVALGVTYNEIDDYLEGKQVS 244 Query: 512 DETVRYVEHLLYGSEYKR 529 E +E Y ++KR Sbjct: 245 PEAQATIEKWWYKGQHKR 262 >gi|189353826|ref|YP_001949453.1| NAD synthetase [Burkholderia multivorans ATCC 17616] gi|189337848|dbj|BAG46917.1| NAD+ synthase [Burkholderia multivorans ATCC 17616] Length = 292 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 32/228 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ ++G+SGG+DS+ A +AV+ L E + + P ++ D Sbjct: 36 LAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLAVERLRGEGYDARFIAMRL--PNGVQND 93 Query: 339 AAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 94 EADAQRALAFVRADEVLTVDVKPAADAMLKSLIASGHAFDTPAQQDFVHGNIKARERMIA 153 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + +++ T + +E +G+ T +GD PL L K +V + Sbjct: 154 QYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADILPLAGLNKRRV---------RAVA 204 Query: 451 SGLGPLTEV---IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 LG V +P + LE ELRP + D+ + Y +DD ++ Sbjct: 205 RALGAEDAVVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDDFLE 247 >gi|319791426|ref|YP_004153066.1| NAD+ synthetase [Variovorax paradoxus EPS] gi|315593889|gb|ADU34955.1| NAD+ synthetase [Variovorax paradoxus EPS] Length = 281 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 38/252 (15%) Query: 262 ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 A+ P+ + A+ V L Y+++ +++G+SGG+DS +A A+ K Sbjct: 17 AALHVAPVFDAAAELARRVDFLAGYLKQTGLKTLVLGISGGVDSLTAGCLAQRAVEKLRA 76 Query: 322 Q-------TIMLPYKYTSPQSLEDAAACAKALGC-------KYDVLPIHD-LVNHFFSLM 366 + + LPY +D A ++L D+ P D ++ + Sbjct: 77 EGYDASFIAMRLPYGVQ-----KDEAEAQRSLTVMKPDRTITVDIRPAADGMLAALKAGE 131 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 +F V NI++R R A++ +++ T + +E +G+ T +GD + Sbjct: 132 LKFRDAAHEDFVLGNIKARQRMIAQFAVAGAHDGIVIGTDHAAEALMGFFTKFGDGAADI 191 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESL 483 PL L K +V +A+ + P ++ K P+A+L P + D+++ Sbjct: 192 TPLTGLNKRRVRAVAALLGA--------------PDELVHKVPTADLESLVPGKPDEDAF 237 Query: 484 P-PYPILDDIIK 494 Y +DD ++ Sbjct: 238 GVTYEEIDDFLE 249 >gi|152980921|ref|YP_001353345.1| NAD synthetase [Janthinobacterium sp. Marseille] gi|151280998|gb|ABR89408.1| NAD+ synthase (glutamine-hydrolysing) [Janthinobacterium sp. Marseille] Length = 309 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 28/235 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ-------TIMLPYKYTSPQS 335 L + + +N + +++G+SGG+DS IA A+ K + LPY Q Sbjct: 65 LHELLIQNQKNCLVLGISGGVDSLTAGLIAQKAVEKSRAYGRQAKFIAMRLPY---GEQR 121 Query: 336 LEDAAACAKAL-----GCKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 ED A A L ++ P D ++ + F E+ + NI++R R Sbjct: 122 DEDDAQSALQLIQPDETLTVNIKPASDGMLASLKAGGLAFRDEKEEDFILGNIKARQRMI 181 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ H+ +++ T + +E +G+ T +GD + PL L K Q+ +A + Sbjct: 182 AQYAVAGHAGGLVIGTDHAAEALMGFFTKHGDGACDVTPLSGLNKRQIRSIAQHCGASVA 241 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESF 503 L +P + LE L P + D+ S PY +DD ++ + + +++ Sbjct: 242 ------LAYKVPTADLET-----LTPLKPDEVSFGLPYDDIDDFLEGKIVSPQAY 285 >gi|302325465|gb|ADL24666.1| hydrolase, carbon-nitrogen family [Fibrobacter succinogenes subsp. succinogenes S85] Length = 289 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 15/234 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--EDLVFK 59 + K+K+ Q GD N + + + +DL++ ELF + Y P E+ F Sbjct: 3 MNKIKVYTLQ-GKWTGDFDSNNKWYKDEALKLKGKDIDLLVLPELFHTPYFPFEENADFF 61 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINL 117 I+ + + + A +V F + G+ NS + + G+I + K ++ Sbjct: 62 DLAIEKDHPIVAEWQEIAKELNAVVVFPFFEKRARGIYHNSAFVFERDGSIAGLYRKSHI 121 Query: 118 PNYSEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ F+EK FI G + +PI LG+LIC D W + + +GA+ L A Sbjct: 122 PDDPAFYEKYYFIPGDTGFEPIKTSAGTLGVLICWDQW-FPEAARIMSLKGADVLIYPTA 180 Query: 177 SPYYHNKLKKRH--------EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 + ++ K+ + ++ G +I N+ G + L F G SF Sbjct: 181 IGWMDSEPKEIYPRQQDSWMTVMRGHAIANRTFVIAANRSGVEGHLTFWGTSFV 234 >gi|45201454|ref|NP_987024.1| AGR358Wp [Ashbya gossypii ATCC 10895] gi|44986388|gb|AAS54848.1| AGR358Wp [Ashbya gossypii ATCC 10895] Length = 715 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 120/595 (20%), Positives = 202/595 (33%), Gaps = 131/595 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A LN D GN + + A + L + EL +SGY D + Sbjct: 5 ITLATCNLNQWALDFEGNRDRILESIRIAKEKNAKLRVGPELEVSGYGCLDHFLEDDVYL 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + D G + +G P + N V+ G+I+ +R K+ L N + Sbjct: 65 HSWEMYAQILKDEKTHGILLDIGMPVVHKNVRYNCRVLSLDGHILFIRPKLWLANDGNYR 124 Query: 125 EKRTF--------------------ISG-----YSNDPIVFRDIRLGILICEDIWKNSNI 159 E R F I+G + + I D +G CE+++ + Sbjct: 125 EMRFFTPWMKPTVVEEFQLPPVIQKITGQHIIPFGDAVIRTLDTCIGAETCEELFTPQSP 184 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDG 218 + G E + + + S + KL KR +++ G +Y NQ G D L +DG Sbjct: 185 NIAMSLDGVEIITNSSGSHHELRKLHKRLDLILGATGRCGGVYLYANQRGCDGDRLYYDG 244 Query: 219 ASF------------------------CFDGQQQLAFQMKHFSE-----QNFMTEWHYDQ 249 + D Q+ ++M S N +T + Q Sbjct: 245 CALIAVNGRVVAQGSQFSLRDVEVVTATVDLQEVRDYRMSVMSRGLQAVSNNVT-FERIQ 303 Query: 250 QLSQWNYMSDDSASTM---------YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + M D T+ Y +EE A AC L DY+++ + LS Sbjct: 304 VPVELAAMQDRFNPTINLTKAKAPYYHSPEEEIALGPAC--WLWDYLRRCRGTGYFLPLS 361 Query: 301 GGIDSALCAAI-------AVDALGKENVQ-----------------------------TI 324 GGIDS A I V + N+Q T Sbjct: 362 GGIDSCATAVIVHSMCRMVVKEASEGNLQVIADARRLARASDDWIPTDAREFANMIFHTC 421 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---------- 374 + ++ ++ A A+ LG + L + +V +L + P Sbjct: 422 FMGTANSTNETRSRAKKLAEHLGAYHVDLNMDSVVKSVVTLFEVTTGKRPIFKVFGGSNI 481 Query: 375 SGIVAENIQSRIRGNI----------LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + +NIQ+R+R + + ++ N ++L ++N E GY T Y S Sbjct: 482 ENLALQNIQARLRMVLAYLFAQLLPWVRSIKNSGGLLVLGSANVDECLRGYLTKYDCSSA 541 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 NP+ + K + S+ + L L E + E +P+AEL P D Sbjct: 542 DINPIGGISKKDLKNFISYASKE---FDLPILREFV-----EATPTAELEPITED 588 >gi|239826370|ref|YP_002948994.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. WCH70] gi|239806663|gb|ACS23728.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. WCH70] Length = 271 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 89/235 (37%), Gaps = 35/235 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-------- 56 +KIA QL+ G+ N + R E+ ++ D+I+ EL+ +GY L Sbjct: 3 IKIACLQLDIAFGNPNENERRVEREIEKISKNHPDIIVLPELWTTGYDLTRLDEIADEGG 62 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKI 115 + K+FIQ L H IV G R+ GV N++ I D II Sbjct: 63 MRTKAFIQ-------KLAKSHH---VNIVAGSIARKTDRGVTNTMYIADRNGII------ 106 Query: 116 NLPNYSEFH------EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 + YS+ H E G + R +IC DI I H+ QGAE Sbjct: 107 -VGEYSKLHLFQLMDEHLYLQPGEEMGLFTLENTRCAGVICYDIRFPEWIRVHM-VQGAE 164 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 LF + P +L ++ + +I N+ G +F G S D Sbjct: 165 VLFVVAEWPL--PRLSHWRTLLAARAIENQCYVIACNRAGSDPNNVFAGHSLVVD 217 >gi|291617236|ref|YP_003519978.1| NadE [Pantoea ananatis LMG 20103] gi|291152266|gb|ADD76850.1| NadE [Pantoea ananatis LMG 20103] Length = 285 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 54/283 (19%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P + + + V L+ Y+ +++ K +++G+SGG DS L +A A+ + +T Sbjct: 26 PTIDPQQEIRTSVDFLKAYLTRHSGVKTLVLGISGGQDSTLTGKLAQMAITELRQETGDK 85 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV-NHFFSLMSQFLQEEPSG 376 + LPY + D C AL + P LV N ++++ + +G Sbjct: 86 DYTFIAVRLPYGVQA-----DEQDCQDALAF---IQPDRSLVVNIKEAVLASERALKDAG 137 Query: 377 IVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 IV N ++R R +++ +K +++ T + +E G+ T YGD NP+ Sbjct: 138 IVLSDFIRGNEKARERMKAQYSIAGMTKGVVVGTDHGAEAVTGFFTKYGDGGSDINPIFR 197 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K Q QL T P + K P+A+L RP D+ +L Y Sbjct: 198 LNKRQGKQLLK--------------TLGCPEHLYLKKPTADLEDDRPGLQDEVALGVTYD 243 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 ++DD ++ + E+ + +E +E+KRR Sbjct: 244 MIDDYLE------------GKTIAPESAKIIEGWYLKTEHKRR 274 >gi|219683186|ref|YP_002469569.1| NAD+ synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|241191588|ref|YP_002968982.1| NAD synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196993|ref|YP_002970548.1| NAD synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|219620836|gb|ACL28993.1| NAD+ synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|240249980|gb|ACS46920.1| NAD synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251547|gb|ACS48486.1| NAD synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794580|gb|ADG34115.1| NAD synthetase [Bifidobacterium animalis subsp. lactis V9] Length = 178 Score = 45.8 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 20/168 (11%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A A N V D N A A G ++ E+ ++ Y +D++ + A Sbjct: 10 VATASPNTRVADPMANAELCCDAIVRAANAGAKVVALPEVVLTSYIADDMLCHDIVLGAA 69 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + L ++T VG P + N++ I AG I+ V K +P Y E Sbjct: 70 EETLAHLVAETAKLDVVFSVGLPLCVNGKIYNTLAICHAGEIMGVVPKTYIPTYGVDFEG 129 Query: 127 RTF-----------ISGYSNDPI----VFR-----DIRLGILICEDIW 154 R F ++G + P VFR + LG ICEDIW Sbjct: 130 RWFSSGPADVTYITVAGQEHVPFGSHQVFRCCQMPQLCLGYEICEDIW 177 >gi|317177412|dbj|BAJ55201.1| carbon-nitrogen hydrolase [Helicobacter pylori F16] Length = 292 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PI +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPITTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|317009234|gb|ADU79814.1| carbon-nitrogen hydrolase [Helicobacter pylori India7] Length = 292 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PI +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIATSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|15611761|ref|NP_223412.1| hypothetical protein jhp0694 [Helicobacter pylori J99] gi|4155248|gb|AAD06269.1| putative [Helicobacter pylori J99] Length = 292 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PI +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIATSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|317012567|gb|ADU83175.1| carbon-nitrogen hydrolase [Helicobacter pylori Lithuania75] Length = 292 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +PI +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPITTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|149002811|ref|ZP_01827737.1| NAD synthetase [Streptococcus pneumoniae SP14-BS69] gi|149007311|ref|ZP_01830969.1| NAD+ synthetase [Streptococcus pneumoniae SP18-BS74] gi|237650474|ref|ZP_04524726.1| NAD synthetase [Streptococcus pneumoniae CCRI 1974] gi|237821795|ref|ZP_04597640.1| NAD synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|307127012|ref|YP_003879043.1| NAD+ synthetase [Streptococcus pneumoniae 670-6B] gi|147759105|gb|EDK66099.1| NAD synthetase [Streptococcus pneumoniae SP14-BS69] gi|147761115|gb|EDK68083.1| NAD+ synthetase [Streptococcus pneumoniae SP18-BS74] gi|306484074|gb|ADM90943.1| NAD+ synthetase [Streptococcus pneumoniae 670-6B] gi|332074742|gb|EGI85216.1| nadE [Streptococcus pneumoniae GA17545] Length = 274 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 28/253 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGSHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII-- 493 L + P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 LLQKLGAE--------------PALYEKIPTADLEEDKPGLADEVALGVTYAEIDDYLEG 240 Query: 494 KRIVENEESFINN 506 K I ++ I N Sbjct: 241 KTISPETQATIEN 253 >gi|33861172|ref|NP_892733.1| putative nitrilase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639904|emb|CAE19074.1| Possible nitrilase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 275 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N A+A E A+R+G +LI E F G E L C++ + T+ Sbjct: 16 NVEANFAEAEEQIELASRRGSELIGLPENFAFLGEDNEKLRMASELSIKCTNFLKTMSQR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P D N S + G ++A DKI +LP+ + + E T + Sbjct: 76 YQVFLLGGGYPVPAGDNRHTFNRSALFGKDGQVLAKYDKIHLFDVDLPDGNLYKESSTIL 135 Query: 131 SGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG + P++ D+ ++G+ IC D+ + + +HL +GAE + Sbjct: 136 SGEEHPPVI--DVPGLCKIGLSICYDV-RFPELYRHLSSKGAELIM 178 >gi|317130886|ref|YP_004097168.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacillus cellulosilyticus DSM 2522] gi|315475834|gb|ADU32437.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacillus cellulosilyticus DSM 2522] Length = 262 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 11/221 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + K+A+ Q++ GDI NI ++ +EA ++ D+I+ EL+ +GY DL KS + Sbjct: 2 QWKVAMIQMDIAFGDIEKNIDIVKQKVKEAMKEAPDVIVLPELWTTGY---DLARLKSLL 58 Query: 64 QACSSAIDTLKSDTHDGG-AGIVVGFPRQDQE-GVLNSVVIL-DAGNIIAVRDKINLPNY 120 + + I S G I+ G Q + G+ N ++I + G ++ K +L + Sbjct: 59 EHSTINISEFLSKLAKGNKVHILAGSIAQATDAGITNIMLIFNNKGELVKEYSKAHL--F 116 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E++ + G + +I +IC DI I H+ Q A+ LF + P Sbjct: 117 RLMDEEKYLVQGNKDGLFSLNNIDCAGVICYDIRFPEWIRTHMIDQ-AKVLFVVAEWP-- 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 ++ ++ + +I N+VG F G S Sbjct: 174 KARIDHWRALLMSRAIENQCYVIACNRVGADPNNEFGGNSM 214 >gi|196001037|ref|XP_002110386.1| hypothetical protein TRIADDRAFT_54321 [Trichoplax adhaerens] gi|190586337|gb|EDV26390.1| hypothetical protein TRIADDRAFT_54321 [Trichoplax adhaerens] Length = 637 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 91/428 (21%), Positives = 151/428 (35%), Gaps = 90/428 (21%) Query: 142 DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLP 201 D LG ICE+ + + + G E + + + S + K K+R +++ + Sbjct: 127 DTCLGSEICEEFFTADSTHVKMALDGVEIITNGSGSHHALRKAKRRFDLMRAATAKTGGI 186 Query: 202 IIYVNQVGGQ-DELIFDGASFCFDGQQQLAFQMKHFSEQ-----------------NFMT 243 ++ NQ G D + +DG + + K E+ N MT Sbjct: 187 YLFANQRGCDGDRMYYDGNCIIARNGDIMNYGSKFSLEEVEVITATLDLEDVRTYRNAMT 246 Query: 244 -------------EWHYDQQLSQ--WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 D +L+ + M + A+ Y +EE AC + DY++ Sbjct: 247 SVRLHSSAATSYPRIRVDFKLTHDTIDVMLTNPATVDYATPEEEICYGPACWM--WDYLR 304 Query: 289 KNNFHKVIIGLSGGIDSALCAAIA-------VDALGKENVQTIM--------------LP 327 ++ H + LSGGIDS+ A I +A N Q I P Sbjct: 305 RSGQHGFFLPLSGGIDSSATACIVSSMSHLVCNACINGNQQVITDARRIVGDDSYIPTEP 364 Query: 328 YKYT--------------SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 ++T S + E A A LG + + I + S+ + + Sbjct: 365 KEFTNRIFTTCYLGTVNSSTHTRERAKNLAGQLGSYHLSIVIDTAITAIISIFTSVTGKT 424 Query: 374 PS----------GIVAENIQSRIRGN--------ILMALSNHSKAMLLTTSNKSEISVGY 415 P + +NIQ+RIR IL + ++L ++N E GY Sbjct: 425 PKFRANGGSFCENLALQNIQARIRMVLSYLFAQLILWSRGLPGSLLVLGSANVDEALCGY 484 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T Y S NP+ + KT + + S L + E P + LE P +E Sbjct: 485 MTKYDCSSADINPIGGISKTDLRSFIKFFRSKYDIPALDSIYEAPPTAELE--PLSEGEI 542 Query: 476 HQTDQESL 483 QTD+E + Sbjct: 543 SQTDEEDM 550 >gi|161503589|ref|YP_001570701.1| NAD synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189083404|sp|A9MFF4|NADE_SALAR RecName: Full=NH(3)-dependent NAD(+) synthetase gi|160864936|gb|ABX21559.1| hypothetical protein SARI_01668 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 275 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 37/216 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAISELREETDDDALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A K VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIKP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + LG P + +K P+A+L + D+ SLP Sbjct: 196 -LAALG-----CPEHLYKKVPTADL---EDDRPSLP 222 >gi|260102806|ref|ZP_05753043.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus helveticus DSM 20075] gi|260083384|gb|EEW67504.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus helveticus DSM 20075] gi|328462092|gb|EGF34261.1| NAD synthetase [Lactobacillus helveticus MTCC 5463] Length = 276 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 32/256 (12%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+DY++ N F K ++G+SGG DS L + A+ G ++ Q I + Y Sbjct: 31 LKDYLKANPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDDSYQFIAVRLPYGVQA 90 Query: 335 SLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DAA K D ++ I + V+ ++ Q+ + NI++R R + A Sbjct: 91 DASDAADAVKFQHPDQDLIVNIKEPVDAMVKVVEASGQK-ITDFNKGNIKARQRMVVQYA 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ +K ++ T + +E G+ T +GD + PL L K R + L Sbjct: 150 IAGANKGAVVGTDHAAENFSGFYTKFGDGAADLTPLFRLDK---------RQGKMLLKEL 200 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE 513 G P + EK+P+A+L + D LP L K I + E +E +D+ Sbjct: 201 G-----CPAHLYEKAPTADLEEEKPD---LPDEVALGVTYKEIDDYLEG-----KEVSDK 247 Query: 514 TVRYVEHLLYGSEYKR 529 ++ L SE+KR Sbjct: 248 AADQIKKLWKKSEHKR 263 >gi|182439862|ref|YP_001827581.1| putative hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468378|dbj|BAG22898.1| putative hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 265 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 18/230 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+ Q + G +A N+ A A G L++ ELF++GY D V + + Sbjct: 1 MPSLRTALLQSSGRPGAVAENLKTLDEAAARAADAGARLLVAPELFLTGYAIGDAVPELA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A + G A + G+P +D E + N+ ++ A D + L NY Sbjct: 61 EPAEGPGARAIAEIAVRHGLA-VHYGYPERDGERIFNASQLIGA-------DGVRLANYR 112 Query: 122 EFH-----EKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + H E+ F G D +R+G+LIC D+ N+ H G + L Sbjct: 113 KTHLFGCFEREWFTPGEQTVVQAELDGLRIGLLICYDVEFPENVRAH-ALAGTDLLLVPT 171 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 A H +V + + + YVN+ G + E F G S C G Sbjct: 172 AQ--MHPFQFVAESVVPVRAFESQMYVAYVNRTGPEGEFEFVGLS-CLAG 218 >gi|85375082|ref|YP_459144.1| hydrolase [Erythrobacter litoralis HTCC2594] gi|84788165|gb|ABC64347.1| hydrolase [Erythrobacter litoralis HTCC2594] Length = 283 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 15/232 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 ++++ +A QL D NI E+A +G +++L ELF Y ++ +F Sbjct: 1 MREITVAALQLPLGSEDEQANIDAVAELVEQAAARGAEIVLPPELFSGPYFCQVEDEALF 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + ++ ++ I F +D N++ ++ G + K ++ Sbjct: 61 ALARPTLEHPSVVAMRKLAGKLEIAIPTSFFERDGHHYYNTLAMIGPDGELQGTYRKSHI 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 P+ + EK F G ND D+ R+G+ +C D W + + GAE LF Sbjct: 121 PDGPGYEEKFYFRPG--NDGFKVWDVCGTRIGVGVCWDQWY-PECARVMALMGAELLFYP 177 Query: 173 -SLNASPYYHNKLKKR--HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 ++ + PY + R + G +P+I N++G + E F G SF Sbjct: 178 TAIGSEPYDADFDTSRMWQRSMQGHSVSNCMPVIAANRIGTEGEAKFYGHSF 229 >gi|192362035|ref|YP_001982136.1| glycosyl hydrolase, family 10 [Cellvibrio japonicus Ueda107] gi|190688200|gb|ACE85878.1| glycosyl hydrolase, family 10 [Cellvibrio japonicus Ueda107] Length = 298 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 17/151 (11%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+L+ G+I K+++P+ F+EK F G PI +LGIL+C D W Sbjct: 104 NTAVVLERDGSIAGKYRKMHIPDDPGFYEKFYFTPGDLGFQPIETSVGKLGILVCWDQW- 162 Query: 156 NSNICKHLKKQGAEFL-----FSLNASPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + GAE L N K ++R T Q +H +P++ VN+ Sbjct: 163 FPEAARLMAMAGAELLIYPTAIGWNPQDEQAEKDRQRDAWTTVQRAHAIANGVPVVSVNR 222 Query: 208 VG------GQDELIFDGASFCFDGQQQLAFQ 232 VG G L F G+SF Q + ++ Sbjct: 223 VGHEADPAGGAGLDFWGSSFVAGPQGEFLYR 253 >gi|251799474|ref|YP_003014205.1| NAD+ synthetase [Paenibacillus sp. JDR-2] gi|247547100|gb|ACT04119.1| NAD+ synthetase [Paenibacillus sp. JDR-2] Length = 279 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 32/240 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALG-KENVQT-----IMLPY-KYTS 332 ++DY+ +++G+SGG DS L + AV+ L +E V+T + LPY Sbjct: 30 IKDYMTFARKTALVLGISGGQDSTLAGKLCQMAVNELNDEEGVKTYRFIPVRLPYGNQKD 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 Q +DA A A G + + I V+ + ++ S N ++R R Sbjct: 90 EQDAQDAIAFIGAEG--FITINIKAAVDAGAAEYEARTGKKLSDFTKGNRKARERMIAQF 147 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++ +++ T + +E G+ T +GD + PL L K Q Q+ N Sbjct: 148 EIAAEENGLVVGTDHAAEAITGFYTKFGDGAADLTPLYRLNKRQGRQILKELNC------ 201 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESFINN 506 P + K+P+A+L +P D+ +L Y +D+ + K I E+E I N Sbjct: 202 --------PEHLYLKAPTADLEEDKPQLADEVALGVTYDDIDNYLEGKEIGEDERQKIEN 253 >gi|149011661|ref|ZP_01832857.1| NAD synthetase [Streptococcus pneumoniae SP19-BS75] gi|194398399|ref|YP_002038067.1| NAD synthetase [Streptococcus pneumoniae G54] gi|238690833|sp|B5E5S7|NADE_STRP4 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|147764092|gb|EDK71024.1| NAD synthetase [Streptococcus pneumoniae SP19-BS75] gi|194358066|gb|ACF56514.1| NAD+ synthetase [Streptococcus pneumoniae G54] Length = 274 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 28/253 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGFHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII-- 493 L + P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 LLQKLGAE--------------PALYEKIPTADLEEDKPGLADEVALGVTYAEIDDYLEG 240 Query: 494 KRIVENEESFINN 506 K I ++ I N Sbjct: 241 KTISPEAQATIEN 253 >gi|332970213|gb|EGK09207.1| carbon-nitrogen family hydrolase [Desmospora sp. 8437] Length = 261 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 11/224 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREE-ANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +K AI Q+N VGD N +K R + A + D+++ E++ + Y L ++ Sbjct: 1 MKYAIYQMNIAVGDPEENRSKVRAWLDRVAKAEKPDVVVLPEMWTTAYTLPRL--EEVAD 58 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDA-GNIIAVRDKINLPNYS 121 + + L+S + G ++ G ++ +G N+ ++D G +I DKI+L Sbjct: 59 RNGEPTLPFLQSLAKEYGVHMIGGSVANNKGQGFYNTAFVVDRNGTLIHQYDKIHL--VP 116 Query: 122 EFHEKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E R G + D +++G++IC D+ + + + L +G E L + P Sbjct: 117 MLDEPRYLKGGEKGVEVFELDGVKMGLIICYDL-RFPELARKLALEGVEVLHVVAEWP-- 173 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L + + + ++ N VG QD + F G S D Sbjct: 174 TARLDHWKTLQVARAIENQMFVVSCNSVGLQDGVEFAGTSMIID 217 >gi|320161725|ref|YP_004174950.1| hypothetical protein ANT_23240 [Anaerolinea thermophila UNI-1] gi|319995579|dbj|BAJ64350.1| hypothetical protein ANT_23240 [Anaerolinea thermophila UNI-1] Length = 273 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 SL+ Y+ + ++ SGG+DS L A +A ALG E + + L +P ++ A Sbjct: 15 SLKTYLA--SLGSAVVAFSGGVDSGLVAVVAHQALG-ERMLAVTLQSPVETPDGVQAAIQ 71 Query: 342 CAKALGCKYDVLPIHDLVNHFF 363 A+ G + V+P DL H F Sbjct: 72 VARQFGFPHRVMPYDDLEKHTF 93 >gi|254292510|ref|YP_003058533.1| N-carbamoylputrescine amidase [Hirschia baltica ATCC 49814] gi|254041041|gb|ACT57836.1| N-carbamoylputrescine amidase [Hirschia baltica ATCC 49814] Length = 289 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 15/272 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M +KL + + Q + D+ NI +A + G D++L ELF Y E+ Sbjct: 1 MSRKLSVGVIQ-SAFSDDMHANIETVVSKIRDAAKLGADVVLPPELFQGHYFCKTQEEKE 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F +++ + L + I V + NS+V++D+ G ++ V K + Sbjct: 60 FLRAYPWREHPCVVALAPIAKELNVVIPVSIYEKSGPHYFNSMVMIDSTGELMGVYRKTH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + + R+G+ IC D W + + GA+ L Sbjct: 120 IPDGPGYQEKFYFRPGDTGFKVWNTQKGRIGVGICWDQW-YPECARAMALAGADLLLYPT 178 Query: 173 SLNASPYY--HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 ++ + P + + ++ G +P+ N+VG +D F G SF D ++ Sbjct: 179 AIGSEPQEPDMDTAARWRRVMQGHAVANVVPVAAANRVGTEDGQAFYGTSFICDAVGEVV 238 Query: 231 FQMKHFSEQNFMTEW---HYDQQLSQWNYMSD 259 + E + + + DQ + W + D Sbjct: 239 EDLDRIEEGVRVASFDLDYNDQMRAAWGFFRD 270 >gi|227540846|ref|ZP_03970895.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Corynebacterium glucuronolyticum ATCC 51866] gi|227183378|gb|EEI64350.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Corynebacterium glucuronolyticum ATCC 51866] Length = 257 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 11/189 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q+N GDI N+A A +G LI+F E + + L + Sbjct: 1 MKVALCQINSS-GDIDSNLALVEENVRTAAAEGARLIVFPEATMHAFGAGPLTGSAARFG 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 ++AI +L D +V G F ++ E V N+ +I + DK +L + F Sbjct: 60 WFTTAIQSLVDDLS---VAVVCGCFRPEEGERVYNTALIARPNEEPLLYDKTHLYDAFGF 116 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASP 178 E T G + + I G+ IC DI + + K + + GA+ + ++ Sbjct: 117 AESDTVAPGENVVTFDWEGITFGVAICFDI-RFPALFKKMARAGAQAIIVPTSWTPGEQK 175 Query: 179 YYHNKLKKR 187 YH +L R Sbjct: 176 VYHWRLLSR 184 >gi|121609207|ref|YP_997014.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Verminephrobacter eiseniae EF01-2] gi|121553847|gb|ABM57996.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Verminephrobacter eiseniae EF01-2] Length = 282 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 12/172 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A AQ++ GDI N+++ +A + L++F EL + G+ + + + Sbjct: 6 IKVAAAQIDGAYGDIGANLSRHLGLIAQARAGAVGLLVFPELSLCGHSAGKDALRLAMTR 65 Query: 65 --ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYS 121 +A+ +D H V GF + G NS + G +I V K+ L Y Sbjct: 66 DDPVIAALAEASTDLH-----TVFGFIEEAPAGQFYNSQATVAHGKLIHVHRKVQLATYG 120 Query: 122 EFHEKRTFISGY--SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 + + + +G + P+ R ++ IC D+W N + L GA L Sbjct: 121 KLRDGLYYAAGTVCGSFPLDAR-WQMATPICADLW-NPALVHALACDGATLL 170 >gi|40890127|gb|AAR97408.1| nitrilase [uncultured organism] Length = 350 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 27/176 (15%) Query: 3 KKLKIAIAQLNPVVGDIA-----GNIAKARRAREEANRQGMDLILFTELFISGYP----- 52 + +K+A AQL+PV+ + IAK A A++QG LI+F E + YP Sbjct: 4 RVIKVAAAQLSPVLATASEHSREDTIAKVIDAIAAASQQGAQLIVFPETVVPYYPYFSFI 63 Query: 53 -------PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA 105 E L + + S+A D + + + G +V+G +D + N+ +I DA Sbjct: 64 TPAVTMGAEHLKLYEQAVTVPSAATDAVAAAAKNYGMVVVLGINERDHGSLYNAQLIFDA 123 Query: 106 -GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 G ++ R KI P Y HE+ + G + V R+G L C W++ N Sbjct: 124 DGELLLKRRKIT-PTY---HERMVWGQGDGSGLKVVDTAAGRVGALAC---WEHYN 172 >gi|127512393|ref|YP_001093590.1| NAD synthetase [Shewanella loihica PV-4] gi|126637688|gb|ABO23331.1| NH(3)-dependent NAD(+) synthetase [Shewanella loihica PV-4] Length = 288 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 45/226 (19%) Query: 295 VIIGLSGGIDSALCA---AIAVDALGKEN-------VQTIMLPYKYTSPQSLEDAA--AC 342 +++G+SGG+DS+L +AVD L E + LP+K Q ED A AC Sbjct: 51 LVLGISGGVDSSLAGRLCQLAVDELNSEGEYEGSYQFIAVRLPFKV---QKDEDEAQMAC 107 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE----------NIQSRIRGNILM 392 K + I + V L E +G+++ N+++R+R Sbjct: 108 QFIQPSKLVTVNIGEGVEGIHHQTLAGL--EVAGVISHPHSNVDFVKGNVKARMRMIAQY 165 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++ + +++ T + +E G+ T +GD + PL L K QV QLA+ + Sbjct: 166 EIAGLTGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLSKRQVRQLAAALGA------ 219 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P +++K+P+A+L +P D+ +L Y +DD ++ Sbjct: 220 --------PSVLVDKAPTADLECDKPQLEDEVALGLTYDQIDDFLE 257 >gi|333030697|ref|ZP_08458758.1| N-carbamoylputrescine amidase [Bacteroides coprosuis DSM 18011] gi|332741294|gb|EGJ71776.1| N-carbamoylputrescine amidase [Bacteroides coprosuis DSM 18011] Length = 297 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 18/164 (10%) Query: 98 NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D IA + K+++P+ ++EK F G PI +LG+L+C D W Sbjct: 102 NTAVVFDTDGTIAGKYRKMHIPDDPAYYEKFYFTPGDMGFTPIQTSLGKLGVLVCWDQWY 161 Query: 156 NSNICKHLKKQGAEFL-----FSLNASPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + QGAE L +S K ++ V Q H LP+I VN+ Sbjct: 162 -PEAARLMALQGAEVLIYPTAIGWESSDAADEKKRQLDAWVISQRGHAVANGLPVISVNR 220 Query: 208 VGGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 VG + + + F G SF Q + + + ++N + E Sbjct: 221 VGHEKDPSKQTNGIQFWGNSFVVGPQGEFLAKAGNDKDENLLVE 264 >gi|307297790|ref|ZP_07577596.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermotogales bacterium mesG1.Ag.4.2] gi|306917050|gb|EFN47432.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermotogales bacterium mesG1.Ag.4.2] Length = 267 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 26/178 (14%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFKKSF 62 K+KI I Q N+ K E + +DL+L E+F SGY E + S Sbjct: 6 KIKIGIVQFRADNDAPGENLEKITSYIESLVEENVDLVLLPEMFNSGYGTDEATISNASE 65 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP---- 118 +Q + + + +D +D +V G + G NS VI+ LP Sbjct: 66 MQEETVEVLSALADYND--IAVVGGIVNKTNGGFFNSTVIM-------------LPYLEP 110 Query: 119 -NYSEFH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 Y++ H EK+ F G F I+ G+L+C +I I + L KQGAE L Sbjct: 111 IYYNKTHLFRDEKKVFTPGSEFKTFEFSGIQFGVLMCYEIGF-PEISRKLCKQGAEVL 167 >gi|316934427|ref|YP_004109409.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris DX-1] gi|315602141|gb|ADU44676.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris DX-1] Length = 579 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 11/158 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + LK+A Q P++ + N+A+ EEA G LI+ E+ +GY D Sbjct: 1 MSQLLKVATVQFEPIMAEKERNVARLLELCEEAAVGGAKLIVTPEMGTTGYCWYDRAEVA 60 Query: 61 SFIQAC---SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKIN 116 F++ ++A + HD IVVG P D +G+ NS V++ +I K Sbjct: 61 PFVEPIPGPTTARFAALARKHD--CTIVVGLPEVDGDGIYYNSAVLIGPDGLIGRHRK-- 116 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDI 153 + E + +G ++ + I R+ +LIC DI Sbjct: 117 --THPYISEPKWSAAGDLHNQVFDTPIGRIALLICMDI 152 >gi|264680879|ref|YP_003280789.1| nitrilase/cyanide hydratase and apolipoprotein [Comamonas testosteroni CNB-2] gi|299531875|ref|ZP_07045275.1| Nitrilase/cyanide hydratase and apolipoprotein [Comamonas testosteroni S44] gi|262211395|gb|ACY35493.1| Nitrilase/cyanide hydratase and apolipoprotein [Comamonas testosteroni CNB-2] gi|298720050|gb|EFI61007.1| Nitrilase/cyanide hydratase and apolipoprotein [Comamonas testosteroni S44] Length = 271 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 21/190 (11%) Query: 7 IAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELF--ISGYPPEDLVFKKSFI 63 + IA L V G D+A N+A+AR ++A G +L++ E F + + L +++ F Sbjct: 1 MKIAALQMVSGQDVAANLAQARSLMQQAAALGAELVVLPEYFCAMGARDTDKLAYREVFG 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVG-FPRQ--DQEGVLN-SVVILDAGNIIAVRDKINLPN 119 Q D + +V G P Q D VLN S+V G +A DKI+L Sbjct: 61 QGPIQ--DFMAGAARQLQLWVVAGTLPLQAADDSHVLNTSLVYSPEGECVARYDKIHLFQ 118 Query: 120 YSEFHEKRT--FISGYSNDPIVFRDI--------RLGILICEDIWKNSNICKHLKKQGAE 169 + E T + + P+V DI RLG+ +C D+ + + + L QGA+ Sbjct: 119 FDNGRESYTEAAVVQAGSQPVVC-DIQARNGVSWRLGLSVCYDL-RFPELYRALSAQGAD 176 Query: 170 FLFSLNASPY 179 L +A Y Sbjct: 177 LLLVPSAFTY 186 >gi|221215673|ref|ZP_03588635.1| NH(3)-dependent NAD(+) synthetase [Burkholderia multivorans CGD1] gi|221164502|gb|EED96986.1| NH(3)-dependent NAD(+) synthetase [Burkholderia multivorans CGD1] Length = 292 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 32/228 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ ++G+SGG+DS+ A +AV+ L E + + P ++ D Sbjct: 36 LAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLAVERLRGEGYDARFIAMRL--PNGVQND 93 Query: 339 AAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 94 EADAQRALAFVRADEVLTVDVKPAADAMLKSLIASGHAFDTPAQQDFVHGNIKARERMIA 153 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + +++ T + +E +G+ T +GD PL L K +V + Sbjct: 154 QYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADILPLAGLNKRRV---------RAVA 204 Query: 451 SGLGPLTEV---IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 LG V +P + LE ELRP + D+ + Y +DD ++ Sbjct: 205 RALGAEEAVVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDDFLE 247 >gi|164428220|ref|XP_956622.2| hypothetical protein NCU01838 [Neurospora crassa OR74A] gi|157072059|gb|EAA27386.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 357 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 13/134 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PE 54 M +K+A+ Q P+ D+ +I KA EA G ++ F+E + GYP P Sbjct: 31 MATTIKVAVTQAEPIWLDLQASIQKAVSLVHEAASNGAKIVAFSETWAPGYPGWCWARPV 90 Query: 55 DLVFKKSF----IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNI 108 D + + A S ++ L+ + +V+GF + G L +I G + Sbjct: 91 DPALNTKYAYNSLTANSPEMEQLQQAAKEDSIAVVIGFSERSSSGSLYIGQAIISPQGEV 150 Query: 109 IAVRDKINLPNYSE 122 R K+ P + E Sbjct: 151 ALQRRKLK-PTHME 163 >gi|320168234|gb|EFW45133.1| carbon-nitrogen family hydrolase [Capsaspora owczarzaki ATCC 30864] Length = 282 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 44/245 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 LK+A+ Q GD+A N+ A+ +A G L+L ELF+SGY P ++L Sbjct: 2 LKVALFQSRGHPGDVAANVQLAKDTLAQARTAGARLLLLPELFLSGYHLPADEL------ 55 Query: 63 IQAC-----SSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKIN 116 AC S+ I L++ D G G+V+G+ G V NS +++D+ + +I Sbjct: 56 -HACARNLESTEIQDLRNACRDAGCGMVLGYSELADAGQVYNSAMLIDS------KGEIQ 108 Query: 117 LPNYSEFH-----EKRTFI-----SGYSNDPIVFRDIR------LGILICEDIWKNSNIC 160 L NY + H EK F + + V +D + +LIC D+ + I Sbjct: 109 L-NYRKTHLYGPDEKAAFTEVPAAAATQSYTAVCKDFEGIPRFNVALLICYDV-EFPEIV 166 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + + GA F+ A+ + + +R ++ + H I Y+N+ G + L F G+S Sbjct: 167 RSVCLHGATFVAIPTAN--FWTGIPRR--VLPTRAIENHAVIAYINRHGNERGLQFGGSS 222 Query: 221 FCFDG 225 C G Sbjct: 223 -CIVG 226 >gi|326789705|ref|YP_004307526.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium lentocellum DSM 5427] gi|326540469|gb|ADZ82328.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium lentocellum DSM 5427] Length = 296 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 23/196 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A+ N G+ + N + E A+R+G++LI+ EL ++GY E+ V K+ Sbjct: 1 MKQVISVAVVNFNARWGEKSINYERIVGYIEAASRRGVNLIVLPELCLTGYDDENHVAKE 60 Query: 61 SFIQA--CSSAIDTLKSDTHDGGAG----IVVGFP---RQDQEGVLNSVVILDAGNIIAV 111 +Q + + S+ D IV+G P ++D + NS ++L ++ Sbjct: 61 QKMQVRLAENKYGEMVSELLDLAKVYNMYIVLGMPERNKKDDATIHNSALVLTPESMSYT 120 Query: 112 RDKINL----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 KI+L PN++ E+ + PI GI IC DI+ + ++ +G Sbjct: 121 YRKIHLALDEPNWATPGEEPLLVET-PWGPI-------GIAICYDIYAFPELIRYYAAKG 172 Query: 168 AEFLFSLNASPYYHNK 183 A + +N++ Y ++ Sbjct: 173 ARLI--VNSTAYAKSR 186 >gi|227529466|ref|ZP_03959515.1| NAD(+) synthase [Lactobacillus vaginalis ATCC 49540] gi|227350551|gb|EEJ40842.1| NAD(+) synthase [Lactobacillus vaginalis ATCC 49540] Length = 275 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 38/230 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ------TIMLPYKYTSP 333 L +++K +++G+SGG DS+L + +AV+ L +E + LPY + Sbjct: 31 LASFLKKTGMKTLVLGISGGQDSSLAGRLSQLAVEKLRQETSDQGYQFIAVRLPYGEQAD 90 Query: 334 QSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +S DA + ++ P D + + + + G NI++R R Sbjct: 91 ES--DAMMAIDQFIHPDKMVRVNIKPSTDALLESLTAAGANISDFNKG----NIKARERM 144 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 + A++ ++ T + +E G+ T +GD PL L K Q L + N+ Sbjct: 145 IVQYAIAGEHSGAVVGTDHAAEAVTGFYTKFGDGGADITPLSGLDKRQGKALLEYLNA-- 202 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + EK P+A+L +P D+++L Y +DD ++ Sbjct: 203 ------------PAHLYEKVPTADLEDDKPMLPDEKALGVSYQEIDDYLE 240 >gi|268593471|ref|ZP_06127692.1| putative carbon-nitrogen hydrolase [Providencia rettgeri DSM 1131] gi|291310892|gb|EFE51345.1| putative carbon-nitrogen hydrolase [Providencia rettgeri DSM 1131] Length = 577 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 22/161 (13%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K K+A P GD+ GNI + A E+ QG++ +F E +SGY +F S Sbjct: 8 KSSKVAAVDFIPAWGDLNGNIQRLVEATEKVAAQGVNYAVFPETAVSGY-----LFSDS- 61 Query: 63 IQACSSAIDTLKSDTHDG--------GAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVR 112 + +DT+ T G + VG +D E L NS V++ II Sbjct: 62 -TELAPYLDTIPGKTTAAILPVLARTGMYMSVGIAERDSETGLAYNSAVLMGPEGIIGKY 120 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICED 152 KI L +++ F G + I R+ +LIC D Sbjct: 121 RKIGL----NSQDQKVFAPGNTGVKTFETPIGRIALLICYD 157 >gi|212710251|ref|ZP_03318379.1| hypothetical protein PROVALCAL_01310 [Providencia alcalifaciens DSM 30120] gi|212687058|gb|EEB46586.1| hypothetical protein PROVALCAL_01310 [Providencia alcalifaciens DSM 30120] Length = 343 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 20/147 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF--- 58 L + K A Q PV D + K R EEA G L+ F E+F+SGYP V Sbjct: 4 LPQFKAAAVQAAPVFLDTDATVDKVCRLIEEAADNGAKLVAFPEVFVSGYPYWSWVMNPI 63 Query: 59 --KKSFIQACSSAIDTLKSDTHDGGAG-------IVVGFPRQDQEGVL----NSVVILDA 105 F + C SAI+ + +VVG ++ G+ V I D Sbjct: 64 DGSPWFEKLCKSAIEVPGPEIKKIAQAAARHHINVVVGVNERNPNGIATLYNTLVTISDE 123 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISG 132 G I+ K+ +P ++ EK T+ +G Sbjct: 124 GKILGRHRKL-VPTWA---EKLTWANG 146 >gi|170746694|ref|YP_001752954.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methylobacterium radiotolerans JCM 2831] gi|170653216|gb|ACB22271.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methylobacterium radiotolerans JCM 2831] Length = 358 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 27/191 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ A Q+ P + G + + A +EA +G ++F E F+ YP Sbjct: 7 VRAAAVQIAPDLDRPDGTLERVLNAVDEAAAKGARFMVFPETFLPYYPYFSFVLPPALQG 66 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR 112 PE L + + + + GA IV+G +D + N+ +I DA + ++ Sbjct: 67 PEHLRLYERAVAVPGPVTQAVSAAARRHGAVIVLGVNERDHGSLYNAQLIFDADGALKLK 126 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN-------ICKHL 163 + P Y HE+ + G V R+G L C W++ N + +H Sbjct: 127 RRKITPTY---HERMIWGQGDGAGLAVVETAVGRVGALAC---WEHYNPLARYALMARHE 180 Query: 164 KKQGAEFLFSL 174 + A+F SL Sbjct: 181 EIHAAQFPGSL 191 >gi|116490134|ref|YP_809660.1| NAD synthetase [Oenococcus oeni PSU-1] gi|116090859|gb|ABJ56013.1| NH(3)-dependent NAD(+) synthetase [Oenococcus oeni PSU-1] Length = 275 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 50/280 (17%) Query: 268 PLQEEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDSALC---AAIAVDAL----GKE 319 P+ + + + + L++Y+ N + ++ +SGG DS L A IA++ L G + Sbjct: 16 PVINAKDEIDRTIAFLKNYLIANPQYKSYVLAISGGQDSTLTGKLARIAINQLRQETGND 75 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIV 378 + I + Y EDA K V P + + + SG+ Sbjct: 76 QYEFIAVRQPYGEQADEEDAQTALKF------VAPDQTITTNIKEATDALTKTLRVSGLA 129 Query: 379 AEN-----IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 A++ I+ ++R A++ ++L T + +E G+ T YGD +PL L Sbjct: 130 ADDMSRGSIKPKMRMIAQYAVAREHDGVVLGTDHAAEAFAGFFTKYGDGGTDLDPLWRLD 189 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K+Q Q+ N+ P S+ K PSA+L RP D+ +L Y + Sbjct: 190 KSQGQQMLKALNA--------------PESLYNKVPSADLEDKRPQLPDEVALGVKYKDI 235 Query: 490 DDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 D ++ +E ++E + +E L +++KR Sbjct: 236 DKYLE------------GREVSEEAAKQIEKLYLTTKHKR 263 >gi|240103016|ref|YP_002959325.1| Carbon-nitrogen hydrolase [Thermococcus gammatolerans EJ3] gi|239910570|gb|ACS33461.1| Carbon-nitrogen hydrolase [Thermococcus gammatolerans EJ3] Length = 263 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 19/176 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSFI 63 +K+A Q+ PV+ D N ++A R EA + LI+ ELF +GY FK ++ + Sbjct: 2 VKVAFGQMRPVLLDPEANYSRAERLVAEAAENEVRLIVLPELFDTGYN-----FKNRAEV 56 Query: 64 QACSSAIDTLKSD------THDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKIN 116 + +S I K+ I+ G +D+ G L NS VI+ I K++ Sbjct: 57 EEVASPIPDGKTTRFLVRLARRYRIFIIAGTAEKDRFGRLYNSAVIVGPTGYIGRYRKVH 116 Query: 117 L-PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 L EF E G+ + F +R+G++IC D W + L +GAE + Sbjct: 117 LFAREKEFFEPGNL--GFEVFNLGF--VRVGVMICFD-WFFPESARTLALKGAEII 167 >gi|302833147|ref|XP_002948137.1| hypothetical protein VOLCADRAFT_73623 [Volvox carteri f. nagariensis] gi|300266357|gb|EFJ50544.1| hypothetical protein VOLCADRAFT_73623 [Volvox carteri f. nagariensis] Length = 269 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 15/194 (7%) Query: 15 VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-VFKKSFIQACSSAIDTL 73 V D A N+ A+RA E+A QG L++ E++ Y + + + S ++ L Sbjct: 3 VTADKAQNLQTAKRAIEDAAAQGAKLVVLPEMWNCPYSNDSFPTYAEDIEGGASGSVAML 62 Query: 74 KSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL-----PNYSEFHEK 126 + +V G P + + + N+ + ++ G ++A K++L P F E Sbjct: 63 SAAAAAACVTLVAGSIPERCGDRLYNTCCVFNSRGELLAKHRKVHLFDIDIPGKITFKES 122 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASPYYH 181 T G + RLGI IC DI + + + +G + L F++ P H Sbjct: 123 LTLSPGPGPTVVDTEAGRLGIGICYDI-RFPELAQLYAARGCQVLIYPGAFNMTTGP-VH 180 Query: 182 NKLKKRHEIVTGQI 195 +L R V QI Sbjct: 181 WELLARARAVDNQI 194 >gi|292490858|ref|YP_003526297.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nitrosococcus halophilus Nc4] gi|291579453|gb|ADE13910.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nitrosococcus halophilus Nc4] Length = 291 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 21/210 (10%) Query: 32 EANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFP 89 +A QG LIL EL Y ED + + + + + G +V+ Sbjct: 27 KAAEQGAKLILLPELHTGPYFCQTEDTQYFDLAEPIPGPSTEVFGTLAAELGVVLVISLF 86 Query: 90 RQDQEGVL-NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLG 146 + G+ N+ V+L+ IA R K+++P+ F+EK F G PI RLG Sbjct: 87 ERRAPGIYHNTAVVLETDGHIAGRYRKMHIPDDPNFYEKFYFTPGDLGFTPIETSVGRLG 146 Query: 147 ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV--- 198 IL+C D W + + GAE L +A + K +++ +T Q H Sbjct: 147 ILVCWDQW-YPEAARLMALGGAELLLYPSAIGWDPRDDEVEKSRQQEAWITVQRGHAIAN 205 Query: 199 HLPIIYVNQVGGQDE-------LIFDGASF 221 LP++ N++G + + + F GASF Sbjct: 206 GLPLLASNRIGIEPDPSQQTPGIQFWGASF 235 >gi|15901273|ref|NP_345877.1| NAD synthetase [Streptococcus pneumoniae TIGR4] gi|15903319|ref|NP_358869.1| NAD synthetase [Streptococcus pneumoniae R6] gi|111657109|ref|ZP_01407897.1| hypothetical protein SpneT_02001669 [Streptococcus pneumoniae TIGR4] gi|116515793|ref|YP_816717.1| NAD synthetase [Streptococcus pneumoniae D39] gi|148985328|ref|ZP_01818551.1| NAD synthetase [Streptococcus pneumoniae SP3-BS71] gi|148989543|ref|ZP_01820902.1| NAD synthetase [Streptococcus pneumoniae SP6-BS73] gi|148990566|ref|ZP_01821692.1| NAD synthetase [Streptococcus pneumoniae SP6-BS73] gi|148997527|ref|ZP_01825132.1| NAD+ synthetase [Streptococcus pneumoniae SP11-BS70] gi|149019375|ref|ZP_01834737.1| NAD synthetase [Streptococcus pneumoniae SP23-BS72] gi|168483954|ref|ZP_02708906.1| NAD+ synthetase [Streptococcus pneumoniae CDC1873-00] gi|168493323|ref|ZP_02717466.1| NAD+ synthetase [Streptococcus pneumoniae CDC3059-06] gi|168575879|ref|ZP_02721794.1| NAD+ synthetase [Streptococcus pneumoniae MLV-016] gi|182684377|ref|YP_001836124.1| NAD(+) synthetase [Streptococcus pneumoniae CGSP14] gi|221232158|ref|YP_002511311.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pneumoniae ATCC 700669] gi|225854866|ref|YP_002736378.1| NAD synthetase [Streptococcus pneumoniae JJA] gi|225857054|ref|YP_002738565.1| NAD synthetase [Streptococcus pneumoniae P1031] gi|225860800|ref|YP_002742309.1| NAD synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298229244|ref|ZP_06962925.1| NAD synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255695|ref|ZP_06979281.1| NAD synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502627|ref|YP_003724567.1| NAD synthetase [Streptococcus pneumoniae TCH8431/19A] gi|303254574|ref|ZP_07340678.1| NAD synthetase [Streptococcus pneumoniae BS455] gi|303259016|ref|ZP_07344995.1| NAD synthetase [Streptococcus pneumoniae SP-BS293] gi|303261700|ref|ZP_07347647.1| NAD synthetase [Streptococcus pneumoniae SP14-BS292] gi|303264369|ref|ZP_07350289.1| NAD synthetase [Streptococcus pneumoniae BS397] gi|303265832|ref|ZP_07351729.1| NAD synthetase [Streptococcus pneumoniae BS457] gi|303268165|ref|ZP_07353964.1| NAD synthetase [Streptococcus pneumoniae BS458] gi|307068073|ref|YP_003877039.1| NAD synthase [Streptococcus pneumoniae AP200] gi|54037884|sp|P65509|NADE_STRR6 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|54041654|sp|P65508|NADE_STRPN RecName: Full=NH(3)-dependent NAD(+) synthetase gi|122278397|sp|Q04JT1|NADE_STRP2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238691169|sp|B2IQN8|NADE_STRPS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766718|sp|B8ZKX7|NADE_STRPJ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766720|sp|C1CF07|NADE_STRZJ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766721|sp|C1CLC7|NADE_STRZP RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766722|sp|C1CQT7|NADE_STRZT RecName: Full=NH(3)-dependent NAD(+) synthetase gi|14972909|gb|AAK75517.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pneumoniae TIGR4] gi|15458917|gb|AAL00080.1| NAD synthetase, ammonia dependent [Streptococcus pneumoniae R6] gi|116076369|gb|ABJ54089.1| NAD+ synthetase [Streptococcus pneumoniae D39] gi|147756582|gb|EDK63623.1| NAD+ synthetase [Streptococcus pneumoniae SP11-BS70] gi|147922526|gb|EDK73645.1| NAD synthetase [Streptococcus pneumoniae SP3-BS71] gi|147924204|gb|EDK75304.1| NAD synthetase [Streptococcus pneumoniae SP6-BS73] gi|147925086|gb|EDK76167.1| NAD synthetase [Streptococcus pneumoniae SP6-BS73] gi|147931245|gb|EDK82224.1| NAD synthetase [Streptococcus pneumoniae SP23-BS72] gi|172042724|gb|EDT50770.1| NAD+ synthetase [Streptococcus pneumoniae CDC1873-00] gi|182629711|gb|ACB90659.1| NAD(+) synthetase [Streptococcus pneumoniae CGSP14] gi|183576622|gb|EDT97150.1| NAD+ synthetase [Streptococcus pneumoniae CDC3059-06] gi|183578168|gb|EDT98696.1| NAD+ synthetase [Streptococcus pneumoniae MLV-016] gi|220674619|emb|CAR69183.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pneumoniae ATCC 700669] gi|225723255|gb|ACO19108.1| NAD+ synthetase [Streptococcus pneumoniae JJA] gi|225725899|gb|ACO21751.1| NAD+ synthetase [Streptococcus pneumoniae P1031] gi|225728183|gb|ACO24034.1| NAD+ synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298238222|gb|ADI69353.1| NAD synthetase [Streptococcus pneumoniae TCH8431/19A] gi|301794458|emb|CBW36893.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pneumoniae INV104] gi|301800284|emb|CBW32904.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pneumoniae OXC141] gi|301802159|emb|CBW34897.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pneumoniae INV200] gi|302598542|gb|EFL65584.1| NAD synthetase [Streptococcus pneumoniae BS455] gi|302637280|gb|EFL67768.1| NAD synthetase [Streptococcus pneumoniae SP14-BS292] gi|302639959|gb|EFL70415.1| NAD synthetase [Streptococcus pneumoniae SP-BS293] gi|302642244|gb|EFL72592.1| NAD synthetase [Streptococcus pneumoniae BS458] gi|302644567|gb|EFL74817.1| NAD synthetase [Streptococcus pneumoniae BS457] gi|302646181|gb|EFL76408.1| NAD synthetase [Streptococcus pneumoniae BS397] gi|306409610|gb|ADM85037.1| NAD synthase [Streptococcus pneumoniae AP200] gi|327389606|gb|EGE87951.1| nadE [Streptococcus pneumoniae GA04375] gi|332075000|gb|EGI85472.1| nadE [Streptococcus pneumoniae GA41301] gi|332200861|gb|EGJ14933.1| nadE [Streptococcus pneumoniae GA41317] gi|332201871|gb|EGJ15941.1| nadE [Streptococcus pneumoniae GA47368] gi|332203249|gb|EGJ17317.1| nadE [Streptococcus pneumoniae GA47901] Length = 274 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 28/253 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGSHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII-- 493 L + P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 LLQKLGAE--------------PALYEKIPTADLEEDKPGLADEVALGVTYAEIDDYLEG 240 Query: 494 KRIVENEESFINN 506 K I ++ I N Sbjct: 241 KTISPEAQATIEN 253 >gi|221200214|ref|ZP_03573256.1| NH(3)-dependent NAD(+) synthetase [Burkholderia multivorans CGD2M] gi|221205895|ref|ZP_03578909.1| NH(3)-dependent NAD(+) synthetase [Burkholderia multivorans CGD2] gi|221173907|gb|EEE06340.1| NH(3)-dependent NAD(+) synthetase [Burkholderia multivorans CGD2] gi|221179555|gb|EEE11960.1| NH(3)-dependent NAD(+) synthetase [Burkholderia multivorans CGD2M] Length = 292 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 32/228 (14%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ ++G+SGG+DS+ A +AV+ L E + + P ++ D Sbjct: 36 LAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLAVERLRGEGYDARFIAMRL--PNGVQND 93 Query: 339 AAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 94 EADAQRALAFVRADEVLTVDVKPAADAMLKSLIASGHAFDTPAQQDFVHGNIKARERMIA 153 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + +++ T + +E +G+ T +GD PL L K +V + Sbjct: 154 QYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADILPLAGLNKRRV---------RAVA 204 Query: 451 SGLGPLTEV---IPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 LG V +P + LE ELRP + D+ + Y +DD ++ Sbjct: 205 RALGAEDAVVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDDFLE 247 >gi|261417354|ref|YP_003251037.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373810|gb|ACX76555.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 287 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 15/234 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--EDLVFK 59 + K+K+ Q GD N + + + +DL++ ELF + Y P E+ F Sbjct: 1 MNKIKVYTLQ-GKWTGDFDSNNKWYKDEALKLKGKDIDLLVLPELFHTPYFPFEENADFF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINL 117 I+ + + + A +V F + G+ NS + + G+I + K ++ Sbjct: 60 DLAIEKDHPIVAEWQEIAKELNAVVVFPFFEKRARGIYHNSAFVFERDGSIAGLYRKSHI 119 Query: 118 PNYSEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ F+EK FI G + +PI LG+LIC D W + + +GA+ L A Sbjct: 120 PDDPAFYEKYYFIPGDTGFEPIKTSAGTLGVLICWDQW-FPEAARIMSLKGADVLIYPTA 178 Query: 177 SPYYHNKLKKRH--------EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 + ++ K+ + ++ G +I N+ G + L F G SF Sbjct: 179 IGWMDSEPKEIYPRQQDSWMTVMRGHAIANRTFVIAANRSGVEGHLTFWGTSFV 232 >gi|159123913|gb|EDP49032.1| nitrilase, putative [Aspergillus fumigatus A1163] Length = 318 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 14/134 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-------PPE 54 + K+++ Q PV D+ G++AK + +EA +G++++ F E++I GY P Sbjct: 1 MTKVRVGAVQAEPVWNDLQGSVAKTIKLIKEAGEKGINVLGFPEVWIPGYLWSMWTNSPI 60 Query: 55 DLV-----FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 D V + + + S +D +++ + G IV+G+ +D + + I G I Sbjct: 61 DNVQLLHEYMANSLARNSPEMDAIRAAVREAGIFIVLGYSERDAGSIYMAQSFISPEGEI 120 Query: 109 IAVRDKINLPNYSE 122 + R K+ P + E Sbjct: 121 VHHRRKLK-PTHVE 133 >gi|168486116|ref|ZP_02710624.1| NAD+ synthetase [Streptococcus pneumoniae CDC1087-00] gi|183570731|gb|EDT91259.1| NAD+ synthetase [Streptococcus pneumoniae CDC1087-00] Length = 272 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 28/253 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGSHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII-- 493 L + P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 LLQKLGAE--------------PALYEKIPTADLEEDKPGLADEVALGVTYAEIDDYLEG 240 Query: 494 KRIVENEESFINN 506 K I ++ I N Sbjct: 241 KTISPEAQATIEN 253 >gi|148358146|ref|YP_001249353.1| amidohydrolase [Legionella pneumophila str. Corby] gi|296105504|ref|YP_003617204.1| probable hydrolase [Legionella pneumophila 2300/99 Alcoy] gi|148279919|gb|ABQ54007.1| amidohydrolase [Legionella pneumophila str. Corby] gi|295647405|gb|ADG23252.1| probable hydrolase [Legionella pneumophila 2300/99 Alcoy] Length = 281 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 11/138 (7%) Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPI-VFRDIRLGILIC 150 ++ G +V G +IAV K ++P+ ++HE F G SN P+ LG+ C Sbjct: 93 EKAGYNTAVAFNPQGELIAVTRKQHIPSGEKYHENFYFKPGDSNYPVHTIAGHYLGLPTC 152 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNA------SPYYHNK-LKKRHEIVTGQISHVHLPII 203 D W + + +GAE L A +P + ++ + ++ + G +S+ II Sbjct: 153 YDQW-FPELSRIYGLKGAEILVYPTAIGGEPTAPGFDSQPMWQKVMVAQGIMSNTF--II 209 Query: 204 YVNQVGGQDELIFDGASF 221 VN++G +D L F G+SF Sbjct: 210 AVNRIGCEDGLSFYGSSF 227 >gi|22298784|ref|NP_682031.1| hypothetical protein tll1241 [Thermosynechococcus elongatus BP-1] gi|22294965|dbj|BAC08793.1| tll1241 [Thermosynechococcus elongatus BP-1] Length = 277 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ-TIMLPYKYTSPQSLEDAA 340 +LR+ + + + +I SGGIDS L A +A D LG V T + P + P LEDA Sbjct: 9 ALRNLIAE--LDRALIAYSGGIDSTLVAKVAQDVLGDRAVAVTAVSPSLF--PADLEDAR 64 Query: 341 ACAKALGCKYDVLPIHDLVN 360 A A+G +++++ H+L N Sbjct: 65 IQAAAIGIRHELIETHELEN 84 >gi|294789108|ref|ZP_06754347.1| NAD+ synthetase [Simonsiella muelleri ATCC 29453] gi|294482849|gb|EFG30537.1| NAD+ synthetase [Simonsiella muelleri ATCC 29453] Length = 272 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 19/146 (13%) Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY--------DVLPIH 356 S LCA +D L + +P + + Q + AA L K+ D+ P Sbjct: 40 STLCAKTGLDVL------CLNMPIRQKADQ-FDRAATHIADLQAKFSNVRSQTVDLTPTF 92 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGY 415 + F +S L+ + + N +SR+R L + ++ T NK E VG+ Sbjct: 93 E---QFEQTVSGSLKTKNRDLAMANTRSRLRMTTLYFYGQINGLLVAGTGNKVEDFGVGF 149 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLA 441 T YGD +P+ DL KTQV++LA Sbjct: 150 FTKYGDGGVDISPIADLLKTQVYELA 175 >gi|227489257|ref|ZP_03919573.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Corynebacterium glucuronolyticum ATCC 51867] gi|227090788|gb|EEI26100.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Corynebacterium glucuronolyticum ATCC 51867] Length = 257 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 11/189 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q+N GDI N+A A +G LI+F E + + L + Sbjct: 1 MKVALCQINSS-GDIDSNLALVEENVRTAAAEGARLIVFPEATMHAFGAGPLTGSAARFG 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 ++AI +L D +V G F ++ E V N+ +I + DK +L + F Sbjct: 60 WFTTAIQSLVDDLS---VAVVCGCFRPEEGERVYNTALIARPNEEPLLYDKTHLYDAFGF 116 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASP 178 E T G + + I G+ IC DI + + K + + GA+ + ++ Sbjct: 117 AESDTVAPGENVVTFDWEGITFGVAICFDI-RFPALFKKMARAGAQAIIVPTSWTPGEQK 175 Query: 179 YYHNKLKKR 187 YH +L R Sbjct: 176 VYHWRLLSR 184 >gi|54295990|ref|YP_122359.1| hypothetical protein lpp0007 [Legionella pneumophila str. Paris] gi|53749775|emb|CAH11155.1| hypothetical protein lpp0007 [Legionella pneumophila str. Paris] Length = 281 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 11/138 (7%) Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPI-VFRDIRLGILIC 150 ++ G +V G +IAV K ++P+ ++HE F G SN P+ LG+ C Sbjct: 93 EKAGYNTAVAFNPQGELIAVTRKQHIPSGEKYHENFYFKPGDSNYPVHTIAGHYLGLPTC 152 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNA------SPYYHNK-LKKRHEIVTGQISHVHLPII 203 D W + + +GAE L A +P + ++ + ++ + G +S+ II Sbjct: 153 YDQW-FPELSRIYGLKGAEILVYPTAIGGEPTAPGFDSQPMWQKVMVAQGIMSNTF--II 209 Query: 204 YVNQVGGQDELIFDGASF 221 VN++G +D L F G+SF Sbjct: 210 AVNRIGCEDGLSFYGSSF 227 >gi|114773666|ref|ZP_01450701.1| glycosyl hydrolase, family 10 [alpha proteobacterium HTCC2255] gi|114546136|gb|EAU49053.1| glycosyl hydrolase, family 10 [alpha proteobacterium HTCC2255] Length = 296 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 17/163 (10%) Query: 98 NSVVILDAGNIIA-VRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D IA + K+++P+ F+EK F G PI +LG+L+C D W Sbjct: 102 NTAVVYDCSTEIAGIYRKMHIPDDPGFYEKFYFTPGDLGFTPIDTSIGKLGVLVCWDQWY 161 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + GAE LF A + N + ++R Q SH +P++ N+ Sbjct: 162 -PEAARLMAMAGAEILFYPTAIGWDRNDTPDEQARQRDAWQIIQRSHAVANSVPVVVANR 220 Query: 208 VG------GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 G G + + F G SF Q +L Q +N + + Sbjct: 221 TGFELSPNGNEGIEFWGTSFVAGPQGELLAQASTDQPENLIVD 263 >gi|158521917|ref|YP_001529787.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfococcus oleovorans Hxd3] gi|158510743|gb|ABW67710.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfococcus oleovorans Hxd3] Length = 270 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 46/219 (21%), Positives = 92/219 (42%), Gaps = 9/219 (4%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K ++ + Q + +GDI N+ A QG DL + EL+ G+ L + Sbjct: 4 KTIRAGVVQFDTRLGDIEVNLKSALDGIAGLAAQGADLAVLPELWPCGFDNRHLA---AH 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR-DKINLPNYS 121 ++ + + + I P +G+ N++V++D A R KI+L +S Sbjct: 61 AAQTPRILEIVSAQAAEHSMVIAGSVPEAGPDGICNTLVVMDRDGREAGRYRKIHL--FS 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 E+R F G + +LG++IC D+ + +C+ L GA + + + + Sbjct: 119 AGGEERFFAKGKAWAVCDTAAGKLGLMICYDL-RFPELCRVLALDGAACV--IVPAQWPE 175 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 ++ + ++ + L ++ N+ G L + G S Sbjct: 176 ARIDHWNALLKARAIENQLFVVGANRCGHDPSLAYGGGS 214 >gi|157164009|ref|YP_001466619.1| carbon-nitrogen family hydrolase [Campylobacter concisus 13826] gi|112800740|gb|EAT98084.1| N-carbamoylputrescine amidase [Campylobacter concisus 13826] Length = 290 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 27/250 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 +K+A+ Q G IAK EA + G DL++ EL + Y ED F F Sbjct: 1 MKVALLQ-QEFKGTKEATIAKTLELISEAKKGGADLVVCQELHQTQYFCQSEDTNF---F 56 Query: 63 IQACSSAIDT--LKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLP 118 A D + G +V + +G+ N+ + + G++ K+++P Sbjct: 57 DHANDWQEDVAFWSRVAKENGVVLVTSLFEKRADGLYHNTAFVFERDGSVAGKYRKMHIP 116 Query: 119 NYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + F+EK F G +P+ +LG+L+C D W + + +GA+ L A Sbjct: 117 DDPGFYEKFYFTPGDIGFEPVETSLGKLGVLVCWDQW-YPEAARLMALKGAKILIYPTAI 175 Query: 178 PYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQ-------DELIFDGASFC 222 ++ K ++ V Q H LP++ VN+VG + D + F G SF Sbjct: 176 GWFEGDSDDEKSRQLEAWVAVQRGHSVANGLPVVAVNRVGFEKDDSGVMDGIKFWGNSFV 235 Query: 223 FDGQQQLAFQ 232 F Q + F+ Sbjct: 236 FGPQGEQLFR 245 >gi|312891866|ref|ZP_07751371.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Mucilaginibacter paludis DSM 18603] gi|311295657|gb|EFQ72821.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Mucilaginibacter paludis DSM 18603] Length = 259 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 6/169 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+A P I + + ++A Q ++I F E ++ GYP + + Sbjct: 1 MKIALAS-PPFPKSINDGLYWLEKLVKDAVAQKAEIICFPESYLPGYPGMGYATEDRTPE 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEF 123 SA+D + + G I++ G+LN ++ A G ++ + K N + Sbjct: 60 KLQSALDNVCKISAQYGIAIIIPMDWHHPNGLLNLAYVVSAHGEVLGYQTK----NQLDP 115 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 E ++ G I+ GI IC + ++ + +QGA +F Sbjct: 116 SEDHIWLPGTERSIFEINGIKFGITICHEGFRYPESVRWAARQGAHIVF 164 >gi|293381887|ref|ZP_06627855.1| NAD+ synthetase [Lactobacillus crispatus 214-1] gi|290921534|gb|EFD98568.1| NAD+ synthetase [Lactobacillus crispatus 214-1] Length = 276 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 32/256 (12%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+DY++ N F K ++G+SGG DS L + A+ G ++ Q I + Y Sbjct: 31 LKDYLKANPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDDSYQFIAVRLPYGVQA 90 Query: 335 SLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +DAA D ++ I + V+ ++ Q+ + NI++R R + A Sbjct: 91 DAQDAADAVAFQKPDQDLIVNIKEPVDAMVKVVEATGQK-ITDFNKGNIKARQRMVVQYA 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ +K ++ T + +E G+ T +GD + PL L K R + L Sbjct: 150 IAGANKGAVVGTDHAAENFSGFYTKFGDGAADLTPLFRLDK---------RQGKALLKEL 200 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE 513 G P + EK+P+A+L +E P P D++ + E +E +D+ Sbjct: 201 G-----CPKHLYEKAPTADL------EEEKPDLP--DEVALGVTYQEIDDYLEGKEVSDK 247 Query: 514 TVRYVEHLLYGSEYKR 529 +E L S++KR Sbjct: 248 AADQIEKLWNKSKHKR 263 >gi|150389850|ref|YP_001319899.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Alkaliphilus metalliredigens QYMF] gi|149949712|gb|ABR48240.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Alkaliphilus metalliredigens QYMF] Length = 269 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 13/191 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++A Q+ P++ D+ N+ + + ++A Q +DLI+ EL+ +GY FK+ Sbjct: 2 FQVAGIQMTPIMNDVEANLKRGQHFIQQAAAQEVDLIVLPELWTTGYYLSKESFKQLAEH 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPR--QDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + ++ A I+ F +D++ + + VI G + K L Sbjct: 62 KDGRTVTLMQDQALRSNASIICPFVEITEDKKLYIAAAVIDHRGELRGTVHKSLLWG--- 118 Query: 123 FHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNA 176 E++ F G P+ I ++GILIC ++ + + L QG E + +SL+A Sbjct: 119 -REQQIFEEGNIEYPVFDTKIGKVGILICYEM-EFPETSRLLALQGVEMIVCPSVWSLSA 176 Query: 177 SPYYHNKLKKR 187 S + +L R Sbjct: 177 SHRWDIQLPAR 187 >gi|302522792|ref|ZP_07275134.1| N-carbamoylputrescine amidase [Streptomyces sp. SPB78] gi|318059802|ref|ZP_07978525.1| hydrolase [Streptomyces sp. SA3_actG] gi|318078856|ref|ZP_07986188.1| hydrolase [Streptomyces sp. SA3_actF] gi|333023412|ref|ZP_08451476.1| putative hydrolase [Streptomyces sp. Tu6071] gi|302431687|gb|EFL03503.1| N-carbamoylputrescine amidase [Streptomyces sp. SPB78] gi|332743264|gb|EGJ73705.1| putative hydrolase [Streptomyces sp. Tu6071] Length = 281 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 8/179 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKS 61 ++ A+ Q GD IAK EA RQG +I F E+F + Y E+ ++ + Sbjct: 6 VRAALVQAT-WTGDTESMIAKHEEHAREAARQGARIIGFQEVFNAPYFCQVQEEEHYRWA 64 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRDKINLPN 119 + ++ + G IVV ++ EG N+ ++DA G+ + K ++P Sbjct: 65 EPVPDGPTVSRMRDLARETGMVIVVPVFEREAEGFYYNTAAVIDADGSYLGKYRKHHIPQ 124 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 F EK F G + P+ + R+G+ IC D + L GA+ +++ +A+ Sbjct: 125 LKGFWEKFYFRPGNAGWPVFDTAVGRVGVYICYDR-HFPEGWRQLGLNGAQIVYNPSAT 182 >gi|227889443|ref|ZP_04007248.1| NAD synthetase [Lactobacillus johnsonii ATCC 33200] gi|227849921|gb|EEJ60007.1| NAD synthetase [Lactobacillus johnsonii ATCC 33200] Length = 277 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 56/268 (20%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY+++N F K ++G+SGG DS L + A+ + +T + LPY + Sbjct: 31 LKDYLKENPFLKTYVLGISGGQDSTLTGKLCQMAIEEMREETGDNSYQFIAVRLPYGVQA 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQEEPSGIV---AENIQSRI 386 S A + P DL+ + M + ++ I NI++R Sbjct: 91 DASDAADAIAFQK--------PDQDLIVNIKEPVDAMVKVVETTGQKITDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ + ++ T + +E G+ T YGD + PL L K Q Sbjct: 143 RMVVQYAIAGANNGAVVGTDHAAENFSGFYTKYGDGAADITPLFRLDKRQ---------- 192 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEE 501 G L E+ P + EK+P+A+L RP D+ +L Y +DD ++ Sbjct: 193 -----GKAMLKELRCPKHLYEKAPTADLEEDRPDLPDEVALGVTYKDVDDYLE------- 240 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 ++ ++E +E L SE+KR Sbjct: 241 -----GKDVSEEAAEQIEKLWKKSEHKR 263 >gi|38453852|dbj|BAD02267.1| NAD synthetase [Nicotiana tabacum] Length = 284 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 103/274 (37%), Gaps = 45/274 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ LK+A LN D N+ + + EA G + L EL I+GY ED + Sbjct: 1 MRLLKVATCNLNQWAMDFDCNLKYIKESIAEAKAGGAKIRLGPELEITGYGCEDHFLE-- 58 Query: 62 FIQACSSAIDTLKSDT-HDGGAGIVVGFPR---QDQEGVLNSVVILDAGNIIAVRDKINL 117 + S A D LK D GI+ F +D E V+ LD II +R K+ L Sbjct: 59 -LDTVSHAWDCLKELLLGDWTDGILYSFGMPVIKDSERYNCQVLCLDR-KIIMIRPKMWL 116 Query: 118 PNYSEFHEKRTFIS---------------------------GYSNDPIVFRDIRLGILIC 150 N + E R F + GY + F D +G +C Sbjct: 117 ANDGNYRELRWFTAWKQKENLEDFHLPSEISETLSQTTVPFGYGY--VQFLDTAVGAEVC 174 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLP---IIYVNQ 207 E+++ L G E + + S H++L+K + IS H +Y N Sbjct: 175 EELFTPLPPHAELALNGVEVFMNASGS---HHQLRKLDLRLRAFISATHTRGGVYMYSNH 231 Query: 208 VGGQ-DELIFDGASFCFDGQQQLAFQMKHFSEQN 240 G L +DG S C + Q FS ++ Sbjct: 232 QGCDGGRLYYDGCS-CVVVNGDMVAQGSQFSPKD 264 >gi|148993020|ref|ZP_01822614.1| NAD+ synthetase [Streptococcus pneumoniae SP9-BS68] gi|168489585|ref|ZP_02713784.1| NAD+ synthetase [Streptococcus pneumoniae SP195] gi|147928221|gb|EDK79238.1| NAD+ synthetase [Streptococcus pneumoniae SP9-BS68] gi|183571891|gb|EDT92419.1| NAD+ synthetase [Streptococcus pneumoniae SP195] gi|332073726|gb|EGI84205.1| nadE [Streptococcus pneumoniae GA17570] Length = 274 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADTMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGSHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII- 493 L L E+ P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 L---------------LQELGADPALYEKIPTADLEEDKPGLADEVALGVTYAEIDDYLE 239 Query: 494 -KRIVENEESFINN 506 K I ++ I N Sbjct: 240 GKTISPEAQATIEN 253 >gi|330965419|gb|EGH65679.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 249 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 20/209 (9%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI--Q 64 +A AQ + G + N+A + A G D +LF EL ++GY P DL + + Sbjct: 6 LAAAQFCSIRGQLKHNLAGHLAFMQRAADLGADYLLFPELSLTGYEP-DLAHELALSPND 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKINLPNYSE 122 AC I L VG P + G + ++ G++IA + P Sbjct: 65 ACLEPIRALAMHLQ---LMTTVGVPLKGPGGSIEIGALTFTAHGDVIAYGKQYLHPG--- 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP--YY 180 E F G N + R+G+ +C D ++ + + + S+ SP Y Sbjct: 119 --EDAVFSPGSENCYLQLNQHRIGLCVCADFSHPEHVQRLSEGGAGVYAASVLISPGGYA 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 H+ E++ G LP++ N G Sbjct: 177 HDS-----EVLAGHARRHRLPVLMANHGG 200 >gi|225859184|ref|YP_002740694.1| NAD synthetase [Streptococcus pneumoniae 70585] gi|254766717|sp|C1C818|NADE_STRP7 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|225721749|gb|ACO17603.1| NAD+ synthetase [Streptococcus pneumoniae 70585] Length = 274 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGSHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII- 493 L L E+ P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 L---------------LQELGADPALYEKIPTADLEEDKPGLADEVALGVTYAEIDDYLE 239 Query: 494 -KRIVENEESFINN 506 K I ++ I N Sbjct: 240 GKTISPEAQATIEN 253 >gi|169780496|ref|XP_001824712.1| cyanide hydratase [Aspergillus oryzae RIB40] gi|83773452|dbj|BAE63579.1| unnamed protein product [Aspergillus oryzae] Length = 333 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 18/161 (11%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 ++++A+ Q PV D+ + K EA +G L+ F E +I GYP P D Sbjct: 8 QVRVAVTQAEPVWLDLKATVDKTCSLIAEAASKGAQLVSFPECWIPGYPAWIWTRPVDQE 67 Query: 58 FKKSFIQ----ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVR 112 +IQ S + + ++ +V+GF + ++ +I + G+I+ R Sbjct: 68 LHSRYIQNSLTVSSPEMTQICKSANENNVIVVLGFSENIHNSLYISQAIISNTGSILTTR 127 Query: 113 DKINLPNYSEFHEKRTFISGYSN--DPIVFRDI-RLGILIC 150 KI + E+ F +++ D +V + R+G L C Sbjct: 128 KKIK----ATHMERTIFGDAFADCLDSVVETAVGRVGALSC 164 >gi|28881234|emb|CAD70472.1| related to aliphatic nitrilase [Neurospora crassa] Length = 327 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 13/134 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PE 54 M +K+A+ Q P+ D+ +I KA EA G ++ F+E + GYP P Sbjct: 1 MATTIKVAVTQAEPIWLDLQASIQKAVSLVHEAASNGAKIVAFSETWAPGYPGWCWARPV 60 Query: 55 DLVFKKSF----IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNI 108 D + + A S ++ L+ + +V+GF + G L +I G + Sbjct: 61 DPALNTKYAYNSLTANSPEMEQLQQAAKEDSIAVVIGFSERSSSGSLYIGQAIISPQGEV 120 Query: 109 IAVRDKINLPNYSE 122 R K+ P + E Sbjct: 121 ALQRRKLK-PTHME 133 >gi|283785036|ref|YP_003364901.1| NH3-dependent NAD(+) synthetase [Citrobacter rodentium ICC168] gi|282948490|emb|CBG88079.1| NH3-dependent NAD(+) synthetase [Citrobacter rodentium ICC168] Length = 275 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQTIMLPYKYTSPQSLE- 337 L+ Y+Q+ +F K +++G+SGG DS L + A+ L +E + P ++ Sbjct: 30 LKAYLQRYSFLKSLVLGISGGQDSTLAGKLCQMAITELRQETGNAALQFIAVRLPYGVQF 89 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLM---SQFLQE---EPSGIVAENIQSRIRGNIL 391 D C AL + P L + S + Q L++ E S V N ++R R Sbjct: 90 DEQDCQDALEF---IQPDRVLTVNIKSAVLASEQALRDAGIELSDFVRGNEKARERMKAQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ + +++ T + +E G+ T YGD NPL L K Q QL + Sbjct: 147 YSIAGMTGGVVVGTDHAAEAITGFFTKYGDGGTDINPLFRLNKRQGKQL---------LA 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + +K+P+A+L RP D+ +L Y +DD ++ Sbjct: 198 ALG-----CPEHLYKKAPTADLEDDRPSLPDEAALGVSYDNIDDYLE 239 >gi|262043051|ref|ZP_06016193.1| NH(3)-dependent NAD(+) synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039603|gb|EEW40732.1| NH(3)-dependent NAD(+) synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 275 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 37/216 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAA---IAVDAL----GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L IA++ L G ++Q + LPY + Sbjct: 30 LKSYLQTYPFIKSLVLGISGGQDSTLTGKLCQIAINELRAETGDSSLQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKAAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ +K +++ T + +E G+ T YGD NP+ L K Q QL + Sbjct: 144 KAQYSIAGMTKGVVVGTDHAAEAITGFFTKYGDGGTDINPIFRLNKRQGKQLLAH----- 198 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 LG P + +K P+A+L + D+ SLP Sbjct: 199 ----LG-----CPEHLYKKLPTADL---EDDRPSLP 222 >gi|152990096|ref|YP_001355818.1| hydrolase [Nitratiruptor sp. SB155-2] gi|151421957|dbj|BAF69461.1| hydrolase [Nitratiruptor sp. SB155-2] Length = 288 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 10/121 (8%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 N+ V+ D G + K+++P+ F+EK F G +PI RLG+L+C D W Sbjct: 92 NTAVVFDNGKLAGKYRKMHIPDDPGFYEKFYFTPGDLGFEPIDTSVGRLGVLVCWDQW-Y 150 Query: 157 SNICKHLKKQGAEFLFSLNASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQV 208 + + +GA+ L A ++ K ++ +T Q +H LP++ VN+V Sbjct: 151 PEAARIMALKGAQILIYPTAIGWFDEDSDEEKNRQLDAWMTVQRAHAIANGLPLVAVNRV 210 Query: 209 G 209 G Sbjct: 211 G 211 >gi|39996130|ref|NP_952081.1| glycosy hydrolase family protein [Geobacter sulfurreducens PCA] gi|39982895|gb|AAR34354.1| glycosyl hydrolase, family 10 [Geobacter sulfurreducens PCA] Length = 294 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 59/263 (22%), Positives = 109/263 (41%), Gaps = 22/263 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + KL +A+ Q D N+AK+ +A+ G L++ EL Y ED Sbjct: 1 MSKLSVALVQ-QSCTADKDLNLAKSIENIRKASVLGAKLVVLQELHTGPYFCQNEDTAHF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINL 117 + L + G +V + G+ N+ V+ + G++ K+++ Sbjct: 60 DLAEPIPGPTTELLGGVAKEFGVVLVSSLFERRAPGLYHNTAVVFEKDGSMAGTYRKMHI 119 Query: 118 PNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ ++EK F G +PI +LG+L+C D W + + GA+ L A Sbjct: 120 PDDPGYYEKFYFTPGDLGFEPIRTSVGKLGVLVCWDQW-YPEAARLMALAGADLLIYPTA 178 Query: 177 SPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDELI-------FDGASF 221 + K++++ +T Q H +P++ VN+VG + + F G+SF Sbjct: 179 IGWDPRDDDDEKIRQKEAWITIQRGHAVANGIPVVSVNRVGHESDPSGVLPGSQFWGSSF 238 Query: 222 CFDGQQQLAFQMKHFSEQNFMTE 244 Q ++ Q + E+ +TE Sbjct: 239 VAGPQGEILAQASNDGEELLITE 261 >gi|168491323|ref|ZP_02715466.1| NAD+ synthetase [Streptococcus pneumoniae CDC0288-04] gi|183574539|gb|EDT95067.1| NAD+ synthetase [Streptococcus pneumoniae CDC0288-04] Length = 274 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 28/253 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAIEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGFHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII-- 493 L + P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 LLQKLGAE--------------PALYEKIPTADLEEDKPGLADEVALGVTYAEIDDYLEG 240 Query: 494 KRIVENEESFINN 506 K I ++ I N Sbjct: 241 KTISPEAQATIEN 253 >gi|312869809|ref|ZP_07729951.1| NAD+ synthase [Lactobacillus oris PB013-T2-3] gi|311094655|gb|EFQ52957.1| NAD+ synthase [Lactobacillus oris PB013-T2-3] Length = 275 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 45/233 (19%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQ----- 322 +EE D V + +++QK +++G+SGG DS+L +AV+ L +E Sbjct: 21 QEEVDKR--VQFIGEFLQKTGMTTLVLGISGGQDSSLAGRLCQLAVEKLRQEAPDKHYQF 78 Query: 323 -TIMLPYKYTSPQSLEDAAACAKALG--------CKYDVLPIHDLVNHFFSLMSQFLQEE 373 + LPY + D + KA+ + ++ P + + + + Sbjct: 79 IAVRLPYGEQA-----DESDAMKAINDFIKPDQTLRVNIKPATNAMVAAVEAAGAQISDF 133 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 G NI++R R + A++ + ++ T + +E G+ T +GD PL L Sbjct: 134 NKG----NIKARERMIVQYAIAGANHGAVVGTDHAAEAVTGFYTKFGDGGADITPLSGLD 189 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 K Q L + + P S+ EK P+A+L +P + D+E+L Sbjct: 190 KRQGKALLEYLRA--------------PKSLYEKVPTADLEDDQPMRPDEEAL 228 >gi|238505344|ref|XP_002383901.1| aliphatic nitrilase, putative [Aspergillus flavus NRRL3357] gi|220690015|gb|EED46365.1| aliphatic nitrilase, putative [Aspergillus flavus NRRL3357] Length = 333 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 18/161 (11%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 ++++A+ Q PV D+ + K EA +G L+ F E +I GYP P D Sbjct: 8 QVRVAVTQAEPVWLDLKATVDKTCSLIAEAASKGAQLVSFPECWIPGYPAWIWTRPVDQE 67 Query: 58 FKKSFIQ----ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVR 112 +IQ S + + ++ +V+GF + ++ +I + G+I+ R Sbjct: 68 LHSRYIQNSLTVSSPEMTQICKSANENNVIVVLGFSENIHNSLYISQAIISNTGSILTTR 127 Query: 113 DKINLPNYSEFHEKRTFISGYSN--DPIVFRDI-RLGILIC 150 KI + E+ F +++ D +V + R+G L C Sbjct: 128 KKIK----ATHMERTIFGDAFADCLDSVVETAVGRVGALSC 164 >gi|254427195|ref|ZP_05040902.1| hydrolase, carbon-nitrogen family [Alcanivorax sp. DG881] gi|196193364|gb|EDX88323.1| hydrolase, carbon-nitrogen family [Alcanivorax sp. DG881] Length = 299 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 116/286 (40%), Gaps = 35/286 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 +++A+ Q D+ N+ + EA QG +L+L EL S Y ED Sbjct: 3 MRVAVIQ-QTNTADLQANLDHSLAQVREAAAQGAELVLLQELHRSLYFCQTEDTSVFDLA 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNY 120 + +TL + + G IV + G+ N+ V+L+ G++ + K+++P+ Sbjct: 62 ESIPGPSTETLGALAKELGIVIVGSLFEKRATGLYHNTAVVLEKDGSLAGIYRKMHIPDD 121 Query: 121 SEFHEKRTFISGYSN--------DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 F+EK F G ++ PI +LG+L+C D W + + GA+ L Sbjct: 122 PGFYEKFYFTPGDADFNDGRSGFSPIETSVGKLGLLVCWDQWY-PEAARLMALAGADLLL 180 Query: 173 SLNASPYYHNKLKKRHE-----IVTGQISHV---HLPIIYVNQVGGQDE------LIFDG 218 A + + + +T Q +H LP++ N+ G + + F G Sbjct: 181 YPTAIGWDRTDEQDEQQRQLDAWITIQRAHAVANGLPVLVANRTGFEQSPADDSGIQFWG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 SF Q + Q +EQ + + D Q S+ W Y+ D Sbjct: 241 NSFICGPQGEFLAQADSDNEQVLLAD--VDLQRSESVRRIWPYLRD 284 >gi|148254439|ref|YP_001239024.1| putative N-carbamoyl-D-amino acid hydrolase [Bradyrhizobium sp. BTAi1] gi|146406612|gb|ABQ35118.1| putative N-carbamoyl-D-amino acid hydrolase [Bradyrhizobium sp. BTAi1] Length = 276 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 7/146 (4%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSA 69 + P+VG++A N+A + ++A G L++ EL SGY + F S A Sbjct: 1 MQPMVGELATNLAHSLDLIKQAVAMGAKLVVLPELASSGYVFKSREEAFAASETIPGGPA 60 Query: 70 IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF 129 + G +V G +D + NS V++ I K++L N E F Sbjct: 61 VTAWSEIAAKHGLHLVAGICERDGTKLYNSAVLIGPKGYIGSFRKVHLWN----EENLYF 116 Query: 130 ISGYSNDPIVFRDI-RLGILICEDIW 154 G P+ +I R+G+ IC D W Sbjct: 117 EPGNLGFPVYHTEIGRIGMAICYDGW 142 >gi|94990983|ref|YP_599083.1| NAD synthetase [Streptococcus pyogenes MGAS10270] gi|189030732|sp|Q1JFM0|NADE_STRPD RecName: Full=NH(3)-dependent NAD(+) synthetase gi|94544491|gb|ABF34539.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pyogenes MGAS10270] Length = 274 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETSDQAYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL ++P L +N ++ Q + +G+ NI++R R Sbjct: 90 DEADAQKALAF---IMPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P TD+ +L Y +DD ++ Sbjct: 198 VLGA-----DAALYEKVPTADLEDQKPGLTDEVALGVTYQDIDDYLE 239 >gi|283833409|ref|ZP_06353150.1| NAD+ synthetase [Citrobacter youngae ATCC 29220] gi|291071062|gb|EFE09171.1| NAD+ synthetase [Citrobacter youngae ATCC 29220] Length = 258 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 38/230 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y+Q F K +++G+SGG DS L + A+ G + +Q + LPY + Sbjct: 30 LKSYLQTYPFLKSLVLGISGGQDSTLAGKLCQMAISELRQETGNDALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NP+ L K Q QL Sbjct: 144 KAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPIFRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P + +K+P+A+L RP D+ +L Y +DD ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADLEDDRPSLPDEAALGVSYDNIDDYLE 239 >gi|290961880|ref|YP_003493062.1| hydrolase [Streptomyces scabiei 87.22] gi|260651406|emb|CBG74528.1| putative hydrolase [Streptomyces scabiei 87.22] Length = 262 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 17/222 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ Q + G + GN+ A A G L++ E+F++GY D + + + Sbjct: 1 MRTALLQSSGRPGSVVGNLKVLDEAAGRAAAAGAGLVVAPEMFLTGYAIGDDIARLAETA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 SA D + G IV G+P + + V NS ++ A D L NY + H Sbjct: 61 DGDSA-DAVAEIAGRHGVAIVYGYPERAGDVVFNSAQLVSA-------DGERLANYRKTH 112 Query: 125 -----EKRTFI-SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 E+ F G S +R+G+LIC D+ N+ H G + L A Sbjct: 113 LFGCFERDHFTPGGRSVVQAELNGLRVGLLICYDVEFPENVRAH-ALAGTDLLVVPTAQM 171 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + + + ++ + + + YVN+VG + E F G S Sbjct: 172 HPFQFVAE--SMIPVRAFENQMYVAYVNRVGREGEFEFVGLS 211 >gi|313638399|gb|EFS03601.1| NAD+ synthetase [Listeria seeligeri FSL S4-171] Length = 274 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 30/235 (12%) Query: 274 ADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 A+ V L+ Y+ KN F K ++G+SGG DS L IA A+ + +T Sbjct: 21 AEIRKSVDFLKAYLTKNPFLKSFVLGISGGQDSTLAGKIAQMAISELRAETADEEYQFFA 80 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 + LPY +S A + V I V+ + +S+ E S N + Sbjct: 81 VSLPYGIQLDESDRQDALDFMQPDNRLTV-NIKASVDASVAALSE-AGVELSDFAKGNEK 138 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R R + A++ +K +++ T + +E G+ T YGD NPL L K Sbjct: 139 ARERMKVQYAIAAMNKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNK--------- 189 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG P + K P+A+L +P D+ +L Y +DD ++ Sbjct: 190 RQGKALLKELG-----CPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLE 239 >gi|307708408|ref|ZP_07644874.1| NAD+ synthetase [Streptococcus mitis NCTC 12261] gi|307615507|gb|EFN94714.1| NAD+ synthetase [Streptococcus mitis NCTC 12261] Length = 274 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 26/239 (10%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGSHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L ++ P++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 195 LLKELGAN--------------PALYEKIPTADLEEDKPGLADEVALGVTYAEIDDYLE 239 >gi|326780526|ref|ZP_08239791.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces cf. griseus XylebKG-1] gi|326660859|gb|EGE45705.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces cf. griseus XylebKG-1] Length = 265 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 18/230 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+ Q + G +A N+ A A G L++ ELF++GY D V + + Sbjct: 1 MPSLRTALLQSSGRPGAVAENLKTLDEAAARAADAGARLLVAPELFLTGYAIGDAVPELA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A + G A + G+P +D E + N+ ++ A D + L NY Sbjct: 61 EPAEGPGARAIAEIAVRHGLA-VHYGYPERDGERIFNASQLIGA-------DGVRLANYR 112 Query: 122 EFH-----EKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + H E+ F G D +R+G+LIC D+ N+ H G + L Sbjct: 113 KTHLFGCFEQEWFTPGEQTVVQAELDGLRIGLLICYDVEFPENVRAH-ALAGTDLLLVPT 171 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 A H +V + + + YVN+ G + E F G S C G Sbjct: 172 AQ--MHPFQFVAESVVPVRAFESQMYVAYVNRTGPEGEFEFVGLS-CLAG 218 >gi|163785082|ref|ZP_02179797.1| carbon-nitrogen hydrolase [Hydrogenivirga sp. 128-5-R1-1] gi|159879647|gb|EDP73436.1| carbon-nitrogen hydrolase [Hydrogenivirga sp. 128-5-R1-1] Length = 292 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 12/160 (7%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPE----DLVFKKSFIQACSSAIDTLKSDT 77 N KA EEA+++G ++ ELF + Y + D I S I L Sbjct: 16 NFEKALNMIEEASKKGAHIVCTQELFKTPYFCQVENWDYFKLAEKIDENSYTIKELSKVA 75 Query: 78 HDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFIS---G 132 IVV + EG+ N+ V++DA G + K+++P+ F+EK F G Sbjct: 76 KSNKVVIVVSLFEKRDEGLYHNTAVVIDADGKYLGKYRKMHIPDDPHFYEKFYFTPGDLG 135 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 Y + DI G+LIC D W + +GA+ LF Sbjct: 136 YKVFKTKYTDI--GVLICWDQW-YPEAARLTAMKGAKILF 172 >gi|310790300|gb|EFQ25833.1| carbon-nitrogen hydrolase [Glomerella graminicola M1.001] Length = 371 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 27/187 (14%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP----------- 52 K K A P D+ G++ K +EA + G L+ F E+++ GYP Sbjct: 5 KYKAAAVTSEPGWFDLEGSVQKTVNFIDEAGQAGCKLVAFPEVWVPGYPYWMWKVTYLQS 64 Query: 53 -PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIA 110 P ++++ ++ S + ++ D + +GF DQ + S V++D +GN+I Sbjct: 65 LPMLKKYRQNALRVDSEEMRRIRRAARDNQIFVSMGFAELDQATLYLSQVLIDPSGNVIN 124 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 R KI P + EK + G + + + +G + + W+N N F Sbjct: 125 HRRKIK-PTHV---EKLVYGDGSGDTFMSVTETGIGRVGQLNCWENMN----------PF 170 Query: 171 LFSLNAS 177 L +LN S Sbjct: 171 LKALNVS 177 >gi|116255137|ref|YP_770971.1| putative aliphatic nitrilase [Rhizobium leguminosarum bv. viciae 3841] gi|115259785|emb|CAK02877.1| putative aliphatic nitrilase [Rhizobium leguminosarum bv. viciae 3841] Length = 340 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 22/165 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK---- 59 K A A + PV D + KA EA R G L++F+E F+ G+P ++ Sbjct: 5 KFWAAAAHIAPVYLDPGASAEKACSVIAEAARNGASLVVFSESFLPGFPVWAALYPPIQS 64 Query: 60 ----KSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQE---GVLNS-VVILDAGN 107 K F+ A I+ ++ D G + +GF ++ G+ NS V+I D G Sbjct: 65 HEHFKRFLTASVYIDGPEIERVRKAASDNGVFVSIGFSERNPASVGGLWNSNVLISDTGQ 124 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIV--FRDIRLGILIC 150 I+ K+ + F EK + G +V R R+G LIC Sbjct: 125 ILIHHRKL----VATFFEKLVWDPGDGAGLVVANTRIGRIGGLIC 165 >gi|302388969|ref|YP_003824790.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646] gi|302199597|gb|ADL07167.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646] Length = 278 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N +V++ SGG+DS + +D LGKENV + + LE+A A+ G Sbjct: 15 KNLGRVVVAFSGGVDSTFLLKVCLDVLGKENVLAVTARSSTYPARELEEARKLAEKFGAN 74 Query: 350 YDVLPIHDL 358 ++++ +L Sbjct: 75 HEIIVSEEL 83 >gi|289168324|ref|YP_003446593.1| NAD+ synthetase [Streptococcus mitis B6] gi|288907891|emb|CBJ22731.1| NAD+ synthetase [Streptococcus mitis B6] Length = 274 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 36/257 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLP-IHDLVNHFFSLMSQFLQEEPSGIVAE- 380 YK+ + P ++ D A KAL + P + +VN S + + E +G Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAF---IQPDVSLVVNIKESADAMTVAVEATGSPVSD 131 Query: 381 ----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Sbjct: 132 FNKGNIKARCRMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQ 191 Query: 437 VFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDD 491 QL L E+ P++ EK P+A+L +P D+ +L Y +DD Sbjct: 192 GKQL---------------LKELGADPALYEKIPTADLEEDKPGLADEVALGVTYEEIDD 236 Query: 492 II--KRIVENEESFINN 506 + K I ++ I N Sbjct: 237 YLEGKTISPEAQATIEN 253 >gi|223039481|ref|ZP_03609769.1| N-carbamoylputrescine amidase [Campylobacter rectus RM3267] gi|222879277|gb|EEF14370.1| N-carbamoylputrescine amidase [Campylobacter rectus RM3267] Length = 290 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 17/149 (11%) Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G++ K+++P+ F+EK F G +PI RLG+L+C D W + + Sbjct: 104 GSVAGKYRKMHIPDDPGFYEKFYFTPGDIGFEPIDTSVGRLGLLVCWDQW-YPEAARLMA 162 Query: 165 KQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQ----- 211 +GA+ L A ++ + K ++ V Q H LP+I VN+VG + Sbjct: 163 LRGAKLLIYPTAIGWFESDEEEEKSRQLEAWVAVQRGHAVANGLPVIAVNRVGFEKDESG 222 Query: 212 --DELIFDGASFCFDGQQQLAFQMKHFSE 238 D + F G SF F Q + F+ SE Sbjct: 223 VMDGIKFWGNSFVFGAQGEELFRADSQSE 251 >gi|126696651|ref|YP_001091537.1| amidohydrolase [Prochlorococcus marinus str. MIT 9301] gi|126543694|gb|ABO17936.1| Predicted amidohydrolase [Prochlorococcus marinus str. MIT 9301] Length = 330 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 18/171 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PED 55 M K K+A AQ+ PV+ D+ G++ K +EA + + LI+F E F+ YP Sbjct: 1 MTKTFKVAAAQVRPVLFDLNGSLNKVILKIKEAATKDVKLIVFPETFLPYYPYFSFVEPP 60 Query: 56 LVFKKSFIQACSSAI-------DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL-DAGN 107 ++ KS ++ A+ D + +++G D + N+ ++ + G Sbjct: 61 VLMGKSHMKLYEQAVEIPGPVTDLVGKSAKKNNIQVLLGVNELDGGSLYNTQILFNEKGE 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 II R KI FHE+ + G + D +LG + W++ N Sbjct: 121 IILKRRKIT----PTFHERMIWGQG-DGSGLEVVDTQLGKIGSLACWEHYN 166 >gi|260654255|ref|ZP_05859745.1| nitrilase 2 [Jonquetella anthropi E3_33 E1] gi|260630888|gb|EEX49082.1| nitrilase 2 [Jonquetella anthropi E3_33 E1] Length = 307 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 32/52 (61%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 + K ++AI Q P++ D A +AKA + EA +G + I+F ELFI GYP Sbjct: 4 LKKHCRLAIVQAEPILFDKAACVAKAVQLIGEAAAKGAEFIVFPELFIPGYP 55 >gi|40890187|gb|AAR97438.1| nitrilase [uncultured organism] Length = 313 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 33/49 (67%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K KIA+ Q PV+ D+ +IA+A + EEA +G +L++F E F+ GYP Sbjct: 2 KSKIAVIQRPPVLLDLQASIARAITSVEEAAGKGSELLVFPETFLPGYP 50 >gi|169614035|ref|XP_001800434.1| hypothetical protein SNOG_10152 [Phaeosphaeria nodorum SN15] gi|160707264|gb|EAT82487.2| hypothetical protein SNOG_10152 [Phaeosphaeria nodorum SN15] Length = 327 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 7/122 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K K+A A PV + A I K + E+A + L++F E FI GYP + + + Sbjct: 8 KFKVAAAHAAPVFMNKAATIKKTVQLIEQAATSDVKLLVFPETFIPGYPYAE---ESVVV 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDA-GNIIAVRDKINLPNY 120 + + ++ G I +G + G + NS VI+D+ G I+ V K+ P Y Sbjct: 65 EPNGEDVSAIQDACRRTGVAINLGISERIANGHTLFNSQVIIDSDGTILGVHRKLQ-PTY 123 Query: 121 SE 122 E Sbjct: 124 VE 125 >gi|148253614|ref|YP_001238199.1| N-carbamoyl-D-amino acid hydrolase [Bradyrhizobium sp. BTAi1] gi|146405787|gb|ABQ34293.1| N-carbamoyl-D-amino acid hydrolase (D-N-alpha- carbamilase) [Bradyrhizobium sp. BTAi1] Length = 308 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 27/174 (15%) Query: 2 LKKLKIAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE----- 54 ++ + IA AQ+ P+ A + + +EA R+G DLI++ EL ++ + P Sbjct: 1 MRVINIAAAQMGPIQRADSRAAVVMRMIALLDEAKRKGADLIIYPELALTTFFPRWYMED 60 Query: 55 ----DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGN-I 108 D F+K+ + A+ L G + +G+ +G N+ V+ D + I Sbjct: 61 QAEVDTWFEKTM---PNEAVQPLFDRAAQHGIAMYLGYAELTPDGHHYNTAVLTDRNSTI 117 Query: 109 IAVRDKINLPNYSEFH--------EKRTFISGYSNDPIVFRDIR--LGILICED 152 I K++LP + EF EKR F G P V+R++ +G+ IC D Sbjct: 118 IGKYRKVHLPGHDEFEPARSHQHLEKRYFEPGDLGFP-VWRNLGGIIGMAICND 170 >gi|53713672|ref|YP_099664.1| beta-ureidopropionase [Bacteroides fragilis YCH46] gi|60681945|ref|YP_212089.1| putative hydrolase [Bacteroides fragilis NCTC 9343] gi|253565620|ref|ZP_04843075.1| beta-ureidopropionase [Bacteroides sp. 3_2_5] gi|265763996|ref|ZP_06092564.1| N-carbamoylputrescine amidase [Bacteroides sp. 2_1_16] gi|52216537|dbj|BAD49130.1| beta-ureidopropionase [Bacteroides fragilis YCH46] gi|60493379|emb|CAH08165.1| putative hydrolase [Bacteroides fragilis NCTC 9343] gi|251945899|gb|EES86306.1| beta-ureidopropionase [Bacteroides sp. 3_2_5] gi|263256604|gb|EEZ27950.1| N-carbamoylputrescine amidase [Bacteroides sp. 2_1_16] gi|301163384|emb|CBW22934.1| putative hydrolase [Bacteroides fragilis 638R] Length = 294 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 18/164 (10%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D G+I K+++P+ ++EK F G +PI +LG+L+C D W Sbjct: 99 NTAVVFDRDGSIAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY 158 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GAE L A + K ++ + + Q +H LP+I VN+ Sbjct: 159 -PEAARLMALKGAEILIYPTAIGWESTDTDDEKKRQLNAWIISQRAHAVANGLPVISVNR 217 Query: 208 VG------GQ-DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 VG GQ + ++F G SF Q + Q + +N + E Sbjct: 218 VGHEPDPSGQTNGILFWGNSFVAGPQGEYLAQAGNDRSENMIVE 261 >gi|268319986|ref|YP_003293642.1| NAD(+) synthetase [Lactobacillus johnsonii FI9785] gi|262398361|emb|CAX67375.1| NAD(+) synthetase [Lactobacillus johnsonii FI9785] Length = 277 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 54/267 (20%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY+++N F K ++G+SGG DS L + A+ + +T + LPY + Sbjct: 31 LKDYLKENPFLKTYVLGISGGQDSTLTGKLCQMAIEEMREETGDNSYQFIAVRLPYGVQA 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQEEPSGIV---AENIQSRI 386 S A + P DL+ + M + ++ I NI++R Sbjct: 91 DASDAADAIAFQK--------PDQDLIVNIKEPVDAMVKVVEATGQKITDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ + ++ T + +E G+ T YGD + PL F+L R Sbjct: 143 RMVVQYAIAGANNGAVVGTDHAAENFSGFYTKYGDGAADITPL--------FRLDK-RQG 193 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEES 502 + LG P + EK+P+A+L RP D+ +L Y +DD ++ Sbjct: 194 KEMLKELG-----CPKHLYEKAPTADLEEDRPDLPDEVALGVTYKDVDDYLE-------- 240 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKR 529 ++ ++E +E L SE+KR Sbjct: 241 ----GKDVSEEAAEQIEKLWKKSEHKR 263 >gi|332669969|ref|YP_004452977.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cellulomonas fimi ATCC 484] gi|332339007|gb|AEE45590.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cellulomonas fimi ATCC 484] Length = 282 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 16/233 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + +++A Q GD IA EA G +I F ELF Y +D + Sbjct: 1 MTVVRVAFTQAT-WTGDKESMIALHEAWTREAASAGAQVICFQELFYGPYFGITQDTAYY 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINL 117 + + + G IV+ +DQ GVL N+ ++DA G + K ++ Sbjct: 60 DYAESVPGPTTERFAALAAELGMVIVLPVYEEDQPGVLYNTAAVIDADGTYLGKYRKHHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ +F EK F G P+ + ++G+ IC D + L GAE +F+ NA Sbjct: 120 PHLPKFWEKFYFRPGNLGYPVFETAVGKIGVNICYDR-HFPEGWRVLALGGAEIVFNPNA 178 Query: 177 S-PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG------GQDELIFDGASFC 222 + P NKL + E +++ + ++ N+VG G + + F G+S+ Sbjct: 179 TAPGISNKLWEI-EQPAAAVANGYF-VVANNRVGREENEYGDEAVAFYGSSYA 229 >gi|294655083|ref|XP_002770080.1| DEHA2B04774p [Debaryomyces hansenii CBS767] gi|199429677|emb|CAR65450.1| DEHA2B04774p [Debaryomyces hansenii] Length = 359 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 7/104 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KLKIA Q+NP +G + NI K ++ G+DL++ E I+GY D + ++ Sbjct: 2 KLKIACVQINPKIGHVESNIKKIQQIL--GKLHGVDLVMLPEFAITGYNFPDRKAIEPYL 59 Query: 64 QACSSAIDT--LKSDTHDGGAGIVVGFPRQDQE---GVLNSVVI 102 + +S T K + ++G+P +D+E + NS V+ Sbjct: 60 EFTTSGRSTQLAKEISTKFECFTMIGYPEKDKEQDYNIYNSAVL 103 >gi|317014168|gb|ADU81604.1| hypothetical protein HPGAM_03915 [Helicobacter pylori Gambia94/24] Length = 292 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS ++ + G+I V K+++P+ F+EK F G +PI +LG+++C D W Sbjct: 98 NSAIVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPIATSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|225868004|ref|YP_002743952.1| NH(3)-dependent NAD(+) synthetase [Streptococcus equi subsp. zooepidemicus] gi|259511198|sp|C0MGX1|NADE_STRS7 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|225701280|emb|CAW98269.1| NH(3)-dependent NAD(+) synthetase [Streptococcus equi subsp. zooepidemicus] Length = 274 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 42/232 (18%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y+ K+ F K ++G+SGG DS+L +A A+ G E Q + LPY + Sbjct: 30 LKAYLLKHPFLKTYVLGISGGQDSSLAGKLAQMAIEELRAETGDEQYQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRI 386 D A KAL + P L VN ++ Q E +G+ NI++R Sbjct: 90 -----DEADAQKALAF---IQPDQALTVNIKEAVDGQLRALETAGLEISDFNKGNIKARQ 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R A++ + ++ T + +E +G+ T +GD PL L K R Sbjct: 142 RMISQYAIAGQTAGAVIGTDHAAENVMGFFTKFGDGGADILPLFRLTK---------RQG 192 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + L PS+ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 193 KALLKALKA-----DPSLYEKVPTADLEDKKPGLADEVALGVSYQEIDDYLE 239 >gi|255555661|ref|XP_002518866.1| glutamine-dependent NAD(+) synthetase, putative [Ricinus communis] gi|223541853|gb|EEF43399.1| glutamine-dependent NAD(+) synthetase, putative [Ricinus communis] Length = 665 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 61/255 (23%), Positives = 99/255 (38%), Gaps = 62/255 (24%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD---------ALGKENVQ----------- 322 L DY++++ ++ LSGG DS+ AAI A G E V+ Sbjct: 277 LWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQMVVKEIANGDEQVKADAVRIGRYTN 336 Query: 323 ----------------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 TI + + +S + + A A +G + +PI +V+ F SL Sbjct: 337 GQFPTDSKEFARRIFYTIYMGSENSSESTRKRAKVLANEIGSWHLDVPIDGVVSAFLSLF 396 Query: 367 SQFLQEEP----------SGIVAENIQSRIRGNILMALSN-----HSKA---MLLTTSNK 408 + + P + +NIQ+R R + L++ H+K ++L +SN Sbjct: 397 EKVTGKRPRYKVDGGSNIENLGLQNIQARTRMVLAFMLASLLPWVHNKPGFYLVLGSSNV 456 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E GY T Y + NP+ + K + W H S L + E P Sbjct: 457 DEGLRGYLTKYDCSAADINPIGSISKQDLRAFLRWAAIHLGYSSLADV-EAAP------- 508 Query: 469 PSAELRPHQTDQESL 483 P+AEL P ++D L Sbjct: 509 PTAELEPIRSDYSQL 523 >gi|118587500|ref|ZP_01544925.1| NH3-dependent NAD+ synthetase [Oenococcus oeni ATCC BAA-1163] gi|118432150|gb|EAV38891.1| NH3-dependent NAD+ synthetase [Oenococcus oeni ATCC BAA-1163] Length = 275 Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 118/279 (42%), Gaps = 48/279 (17%) Query: 268 PLQEEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDSALC---AAIAVDAL----GKE 319 P+ + + + + L++Y+ N + ++ +SGG DS L A IA++ L G + Sbjct: 16 PVINAKDEIDRTIAFLKNYLIANPQYKSYVLAISGGQDSTLTGKLARIAINQLRQETGND 75 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + I + Y EDA K + I + +++ L++ SG+ Sbjct: 76 QYEFIAVRQPYGEQADEEDAQTALKFVAPDQ---TITTNIKEATDALTKTLRD--SGLAV 130 Query: 380 EN-----IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 ++ I+ ++R A++ ++L T + +E G+ T YGD +PL L K Sbjct: 131 DDMSRGSIKPKMRMIAQYAVAREHDGVVLGTDHAAEAFAGFFTKYGDGGTDLDPLWRLDK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 +Q Q+ N+ P S+ K PSA+L RP D+ +L Y +D Sbjct: 191 SQGQQMLKALNA--------------PESLYNKVPSADLEDERPQLPDEVALGVKYKDID 236 Query: 491 DIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 ++ +E ++E + +E L +++KR Sbjct: 237 KYLE------------GREVSEEAAKQIEKLYLTTKHKR 263 >gi|322783670|gb|EFZ11008.1| hypothetical protein SINV_08350 [Solenopsis invicta] Length = 820 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 107/563 (19%), Positives = 191/563 (33%), Gaps = 128/563 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A+ LN D GN + ++ +EA G EL + GY ED ++ Sbjct: 1 MGRTVTVAVCTLNQWAMDFDGNTRRILQSIQEAKDAGATYRSGPELEVCGYSCEDHFYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + TL + I VG P + N V I+ +R K+ L Sbjct: 61 DTLLHSWEVLTTLLKSSVCEDILIDVGMPVMHKNVTYNCRVAFLNRRILLIRPKMRLCED 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 + E R F ++G + P I RD +G ICE++W Sbjct: 121 GNYRESRWFSPWTKERTVEDYFLPRMISQVTGQTVVPFGDAVIATRDTCVGFEICEELWH 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 ++ + G E + + + S Y K ++V ++ N G + Sbjct: 181 PASNHIPMSMDGVEIIANGSGSYYELRKAYVTVDLVKSATFKAGGCYMFSNLRGCDGGRL 240 Query: 216 F--DGASFCFDGQ-----QQLAFQMKHFSEQNFMTE------------------------ 244 + G+S +G +Q A + + F E Sbjct: 241 YFNGGSSITLNGNILNRGRQFALEDVEVTVATFDLEDIRNYRNSIRSRSHAAAASPSYPR 300 Query: 245 WHYDQQLSQWNYMS----------------DDSASTMYIPLQEEE-ADYNACVLSLRDYV 287 D L+ N +S DD S++ EEE A AC + DY+ Sbjct: 301 VKVDFALTPENLVSNPPDRPIDGVQDVYGDDDGHSSLVHHTAEEEIAMAPACWMW--DYL 358 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIA-------VDALGKENVQ------------------ 322 +++ + LSGG+DS+ A I V+++ K + Q Sbjct: 359 RRSCQGGFFLPLSGGVDSSSSACIVYSMCEMIVESVSKGDAQVLADIRKIVGDCEYVPVD 418 Query: 323 ----------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE 372 T + + +S ++ AA A +G + + I ++ + Q + Sbjct: 419 PKQLCNTILVTCYMGTENSSAETKARAAELASQIGSYHHGIVIDTAISAILGIFQQVTKL 478 Query: 373 EP----------SGIVAENIQSRIR-------GNILMALSNHSKAML-LTTSNKSEISVG 414 P + +N+Q+R+R +++ + +L L + N E G Sbjct: 479 TPRFKVQGGSPRENLALQNVQARLRMVIAYLFAQLMLWVRGRPGGLLVLGSGNVDESLRG 538 Query: 415 YGTLYGDMSGGFNPLKDLYKTQV 437 Y T Y S NP+ + K + Sbjct: 539 YLTKYDCSSADINPIGGIAKNDL 561 >gi|302888429|ref|XP_003043101.1| hypothetical protein NECHADRAFT_51531 [Nectria haematococca mpVI 77-13-4] gi|256724016|gb|EEU37388.1| hypothetical protein NECHADRAFT_51531 [Nectria haematococca mpVI 77-13-4] Length = 323 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 13/125 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--------ED 55 K+K+A Q PV D+ G + K +EA G +++ F E+FI GYP ++ Sbjct: 5 KIKVAAVQAEPVWNDLQGGVEKVISLIKEAGSNGANVVGFPEVFIPGYPWSIWQNSVFDN 64 Query: 56 LVFKKSF----IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIA 110 + F + ++ S +D +++ + G +V+G+ + + + + +D G I+ Sbjct: 65 VPFMNEYFDNSMERESKEMDRIRAAVREAGVFVVLGYSERYRGTLYIAQSFIDPTGTIVH 124 Query: 111 VRDKI 115 R KI Sbjct: 125 HRRKI 129 >gi|189465655|ref|ZP_03014440.1| hypothetical protein BACINT_02015 [Bacteroides intestinalis DSM 17393] gi|189433919|gb|EDV02904.1| hypothetical protein BACINT_02015 [Bacteroides intestinalis DSM 17393] Length = 294 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 21/182 (11%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ V+ D G+I K+++P+ ++EK F G +PI +LG+L+C D W Sbjct: 99 NTAVVFDRDGSIAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY 158 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + +GAE L A + + K ++ + + Q +H LP+I VN+ Sbjct: 159 -PEAARLMALKGAELLIYPTAIGWESSDADDEKARQLNAWIISQRAHAVANGLPVISVNR 217 Query: 208 VGGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ---LSQWNYM 257 VG + + + F G SF Q + Q + +N + E D+ W ++ Sbjct: 218 VGHEPDPSMQTNGIQFWGNSFVAGPQGEFLAQAGNDRPENIVVEIDMDRSENVRRWWPFL 277 Query: 258 SD 259 D Sbjct: 278 RD 279 >gi|88808404|ref|ZP_01123914.1| Possible nitrilase [Synechococcus sp. WH 7805] gi|88787392|gb|EAR18549.1| Possible nitrilase [Synechococcus sp. WH 7805] Length = 273 Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 24/167 (14%) Query: 22 NIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDG 80 N + A + A R+G +LI E F G P + L + S + T+ Sbjct: 20 NFSAAEEQIDLAARRGAELIGLPENFAFIGEPEQRLAIAPALADQASQFLITMARRYQ-- 77 Query: 81 GAGIVV---GFPRQDQEGV---LNSVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTF 129 +V+ GFP +G + ++ G ++A DKI +LP+ S + E +F Sbjct: 78 ---VVILGGGFPVPVGDGAHTWQRAQLVGRDGQVLASYDKIHLFDVDLPDGSSYRESSSF 134 Query: 130 ISGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 + G S P+V D+ R+G+ IC D+ + + +HL GAE L Sbjct: 135 MPGSSPPPVV--DVPGLCRVGVSICYDV-RFPELYRHLVGAGAELLM 178 >gi|187477183|ref|YP_785207.1| N-carbamoyl-D-amino acid hydrolase [Bordetella avium 197N] gi|115421769|emb|CAJ48280.1| N-carbamoyl-D-amino acid hydrolase [Bordetella avium 197N] Length = 333 Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 38/187 (20%) Query: 1 MLKKLKIAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE---- 54 M + + +A AQL P+ +A+ R E A ++G +++F EL ++ + P Sbjct: 5 MSRIVTVAAAQLGPIQRAEGRESVVARMIRLLERAQQRGAQVVVFPELALTTFFPRWYCE 64 Query: 55 -----DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPR----QDQEGVL------NS 99 D F+ S S A L G + +G+ D++GV+ S Sbjct: 65 NRDEADGWFETSLP---SPATQPLFDAIKRYGLMVYLGYAELAWEPDEQGVVRKRRFNTS 121 Query: 100 VVILDAGNIIAVRDKINLPNYSEFH--------EKRTFISGYSNDPIVFR------DIRL 145 VVI G I+ K++LP +EF EKR F G P+V ++ + Sbjct: 122 VVIAPNGEIVFKYRKVHLPGQAEFAPYRKVQHLEKRYFEVGNLGFPVVRTPVAPGLEVNM 181 Query: 146 GILICED 152 G+LIC D Sbjct: 182 GMLICND 188 >gi|229588098|ref|YP_002870217.1| NAD synthetase [Pseudomonas fluorescens SBW25] gi|229359964|emb|CAY46818.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas fluorescens SBW25] Length = 275 Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 29/224 (12%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 EA+ V ++D ++ + +++G+SGG+DS +A A+ + T Sbjct: 25 EAEVARRVTFIQDCLRNSGLKTLVLGISGGVDSLTAGLLAQRAMQELRASTGDEAYRFIA 84 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG--IVAEN 381 + LPY+ T L+ A+ + + I V + ++ F + V N Sbjct: 85 VRLPYE-TQFDELDAQASVDFIEPDERHTVNIGPAVKALANEVAAFEGKAAVSRDFVLGN 143 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++R+R ++ + +++ T + +E +G+ T +GD + PL L K QV +A Sbjct: 144 TKARMRMVAQYTIAGAAGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIA 203 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 + P S++EK P+A+L P + D+ S Sbjct: 204 RHFGA--------------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|157961582|ref|YP_001501616.1| NAD synthetase [Shewanella pealeana ATCC 700345] gi|189083411|sp|A8H3E4|NADE_SHEPA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|157846582|gb|ABV87081.1| NAD+ synthetase [Shewanella pealeana ATCC 700345] Length = 276 Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 48/242 (19%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKE------NVQTIMLPYKY 330 V ++ +++++ +++G+SGG+DS+L +AVD L + + LPY Sbjct: 25 VAFIKSKLKQSSTSTLVLGISGGVDSSLAGRLCQLAVDELNSDASGNHYQFIAVRLPYDV 84 Query: 331 TSPQSLEDAA--ACAKALGCKYDVLPIHDLVN--HFFSLMSQFLQEEPSGI--------- 377 Q ED A AC K + + V+ H +L + E +GI Sbjct: 85 ---QKDEDEAQLACQFIQPSKQVTVNVKQGVDGVHCETLAAV----EAAGIALPEADKID 137 Query: 378 -VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 V N+++R+R ++ +++ T + +E G+ T +GD + PL L K Q Sbjct: 138 FVKGNVKARMRMVAQYEIAGLVAGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQ 197 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDI 492 V QLA++ + P ++ K+P+A+L +P D+ +L Y +DD Sbjct: 198 VRQLAAFLGA--------------PDKLVIKAPTADLEENKPQLEDEVALGLTYEQIDDF 243 Query: 493 IK 494 ++ Sbjct: 244 LE 245 >gi|307326823|ref|ZP_07606015.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces violaceusniger Tu 4113] gi|306887586|gb|EFN18580.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces violaceusniger Tu 4113] Length = 266 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 92/232 (39%), Gaps = 21/232 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+ Q + GD AGN+ A A G L++ E+F++GY ++ Sbjct: 1 MSPLRTALLQNSGHPGDPAGNLKVLDEAAARAAADGAGLLVTAEMFLTGYAIGGRGVREL 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A + + G I+ G+P V NS ++ A D L NY Sbjct: 61 AEPADGPSGRAVAEIAATHGLAILYGYPESHAGAVYNSARLVGA-------DGAELANYR 113 Query: 122 EFH-----EKRTFISGYSNDPIV---FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 + H E+ +F G P+V ++ +GILIC D+ N+ H G + L Sbjct: 114 KSHLYGCFERASFTPG--ETPVVQATVGELTVGILICYDVEFPENVRAH-ALAGTDLLLV 170 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 A H ++ + + I YVN+ G + E F G S C G Sbjct: 171 PTAQ--MHPFEFVAESVIPVRAFESQMYIAYVNRSGVEGEFDFVGLS-CLAG 219 >gi|301773668|ref|XP_002922253.1| PREDICTED: LOW QUALITY PROTEIN: glutamine-dependent NAD(+) synthetase-like [Ailuropoda melanoleuca] Length = 740 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 117/569 (20%), Positives = 196/569 (34%), Gaps = 120/569 (21%) Query: 28 RAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVG 87 R E A +G L EL I GY D ++ + + L VG Sbjct: 64 RCIEIAKCKGARYRLGPELEICGYGCWDHYYESDTLLHSLQVLTALLESPVTQDIICDVG 123 Query: 88 FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG--------------- 132 P + N VI ++ +R K+ L N + E R F Sbjct: 124 MPVMHRNVRYNCRVIFLNRRVLLIRPKMALANEGNYRELRWFTPWSRSRQTEEYFLPRMI 183 Query: 133 ----------YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + + + +D +G ICE++W + H+ G E + + S + Sbjct: 184 QDVTKQETVPFGDAVLATQDTCIGSEICEELWTPHSPHVHMGLDGVEIFTNASGSHHVLR 243 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGAS--------------FCFDGQQ 227 K R ++VT + + NQ G D L +DG + F D + Sbjct: 244 KAHARVDLVTMATTKNGGIYLLANQKGCDGDRLYYDGCALIAMNGHIFAQGSQFSLDDVE 303 Query: 228 QLAFQMKHFSEQNFMTEWHYD----QQLSQWNYMSDDSASTMYIPLQEE-----EADYN- 277 L + +++ E ++S + + D A + + L E E Y+ Sbjct: 304 VLTATLDLEDVRSYRAEISSRNLAASKVSPYPRVKVDFALSCHEDLLEPPSEPIEWKYHS 363 Query: 278 ---------ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI--------AVDALGKE- 319 AC L D+++++ ++ LSGG+DSA A AV KE Sbjct: 364 PAEEISLGPACWLW--DFLRRSRQAGFLLPLSGGVDSAATACXSMCHQVCEAVKHGNKEV 421 Query: 320 --NVQTIM--LPYKYTSPQSL--------------------EDAAACAKALGCKYDVLPI 355 +V+TI+ L Y PQ L + A A+ +G + L I Sbjct: 422 LADVRTIVDQLSYTPQDPQDLCGRVLTTCYMASENSSQETCDRARELAQQIGSHHIGLHI 481 Query: 356 HDLVNHFFSLMSQFLQEEP----------SGIVAENIQSRIRGNI--------LMALSNH 397 V + S + P + +N+Q+R+R + L A Sbjct: 482 DPAVKAVVGIFSLVTGKRPLFAVHGGSSRENLALQNVQARLRMVVAYLFAQLSLWARGAR 541 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV---FQLASWRNSHGITSGLG 454 ++L ++N E +GY T Y S NP+ + KT + Q R G+ Sbjct: 542 GGLLVLGSANVDESLLGYLTKYDCSSADINPIGGISKTDLKAFVQFCMERFQLPALQGI- 600 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESL 483 + P+ E P + + QTD+E + Sbjct: 601 ----LAAPATAELEPLTDGKVSQTDEEDM 625 >gi|237736558|ref|ZP_04567039.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229420420|gb|EEO35467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 352 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 22/195 (11%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG--- 347 N KV++G+SGG+DS +I+V L K+ + I + + +SL++ AK + Sbjct: 2 NRKKVVLGMSGGVDS----SISVYLLQKQGYEVIGVTLNHKKEESLKEEIDSAKKVANFF 57 Query: 348 -CKYDVLPIHDL-----VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 K+ V+ I D+ VN+F S+ + P I E R++ IL +++ KA Sbjct: 58 NIKHRVIDIEDIFQKEVVNNFLDGYSKGITPSPCVICDE----RVKMKILFDIADEEKAY 113 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 + T + S Y + + KD K Q + L +S I+ L PL + Sbjct: 114 YVATGHYC--STEYNEEFDKIL--LKKAKDSKKDQSYMLYRL-DSDKISRLLFPLFKYTK 168 Query: 462 PSILEKSPSAELRPH 476 I E + L H Sbjct: 169 NEIREIGENIGLEVH 183 >gi|167577506|ref|ZP_02370380.1| NAD synthetase [Burkholderia thailandensis TXDOH] Length = 284 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 34/227 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ ++G+SGGIDS+ A +AV+ L + LPY + Sbjct: 38 DYLRAAGLRTCVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG-----AQH 92 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMS-QFLQEEPSGIVAENIQSRIRGN 389 D A +AL DV P D + + +L V NI++R R Sbjct: 93 DEADAQRALAFVRADETLTVDVKPAADAMLAALATGGLAYLDHAHQDFVLGNIKARERMI 152 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ + +++ T + +E +G+ T +GD PL L K +V +LA Sbjct: 153 AQYAVAGARRGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRELARM------ 206 Query: 450 TSGLG-PLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 G G PL P + LE LRP D+++ Y +DD ++ Sbjct: 207 -LGAGEPLVMKTPTADLET-----LRPQLPDEQAYGITYEQIDDFLE 247 >gi|296110641|ref|YP_003621022.1| NAD(+) synthetase [Leuconostoc kimchii IMSNU 11154] gi|295832172|gb|ADG40053.1| NAD(+) synthetase [Leuconostoc kimchii IMSNU 11154] Length = 277 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 35/217 (16%) Query: 283 LRDYVQKN-NFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE- 337 L+ Y++ N + +I +SGG DS L A IA+D L ++ +T P ++ Sbjct: 31 LKQYLKHNPQYKSYVIAISGGQDSTLAGKLAKIAIDELNEKTDKTNYQLIAVRQPYGIQL 90 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSL---MSQFLQEEPSGIVAEN-----IQSRIRGN 389 DA+ AL + P L + + M+ L++ G++ ++ I+ ++R Sbjct: 91 DASDALSALDF---IQPDQTLTTNIKTATDAMTDALRQ--GGLIVDDMSRGSIKPKMRMI 145 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ ++ +++ T + +E G+ T YGD NPL L K Q Q+ ++ Sbjct: 146 AQYAVARENQGVVVGTDHAAEAFAGFFTKYGDGGTDINPLWRLNKRQGRQMLQSLSA--- 202 Query: 450 TSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 P ++ EK P+A+L RP D+ +L Sbjct: 203 -----------PTALYEKIPTADLEDDRPQLPDEIAL 228 >gi|237737357|ref|ZP_04567838.1| succinoglycan biosynthesis regulator [Fusobacterium mortiferum ATCC 9817] gi|229421219|gb|EEO36266.1| succinoglycan biosynthesis regulator [Fusobacterium mortiferum ATCC 9817] Length = 232 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +V++ LSGG+DS+ C A+AVD GK+NV + Y + LE A+ + Y + Sbjct: 2 RVLVLLSGGVDSSTCLAMAVDRYGKDNVVALSASYGQKHTKELES----ARKIASYYQIE 57 Query: 354 PIHDLVNHFF-----SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 I + F SL+S +E P G E +++ I G L + L+T+ Sbjct: 58 LIEINLGKIFSFSNCSLLSHSDKEIPQGSYDEQLRN-IDGEKLSTYVPFRNGLFLSTAAS 116 Query: 409 SEIS-----VGYGTLYGDMSGGFNP 428 +S + YG D +G P Sbjct: 117 IALSKNCQVIYYGAHSDDSAGDAYP 141 >gi|77461376|ref|YP_350883.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas fluorescens Pf0-1] gi|77385379|gb|ABA76892.1| putative hydrolase [Pseudomonas fluorescens Pf0-1] Length = 264 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 43/188 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P+ + A N+ + + EA +G DL++ E+F++GY Sbjct: 1 MRVALYQCPPLPLEPAANLQRLHQLAMEA--KGADLLVVPEMFLTGY------------N 46 Query: 65 ACSSAIDTLKSDTHDG-------------GAGIVVGFPRQDQEG-VLNSVVILDAGNIIA 110 A+ TL ++ ++G G I+ G+P + EG + N+V ++D+ Sbjct: 47 IGKEAVATL-AEVYNGEWAQQVGRIAKAAGLAILYGYPERTAEGQIYNAVQLIDSSG--- 102 Query: 111 VRDKINLPNYSEFH-----EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLK 164 L NY + H ++ F G PIV +LG LIC D+ N + L Sbjct: 103 ----ERLCNYRKTHLFGDLDRSMFSPGDGEFPIVELNGWKLGFLICYDLEFPEN-ARRLA 157 Query: 165 KQGAEFLF 172 +GAE + Sbjct: 158 LEGAELIL 165 >gi|297181637|gb|ADI17820.1| predicted amidohydrolase [uncultured Rhodospirillales bacterium HF0200_01O14] Length = 288 Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 15/157 (9%) Query: 31 EEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAG----- 83 EEA ++G+ ++ F E+F Y P +D K + A D + A Sbjct: 37 EEAGKKGVQVLCFQEVFTQPYFCPSQD----KKWYAAAEKIPDGPTTQLMSELAAKYKMV 92 Query: 84 IVVGFPRQDQEGV-LNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV-F 140 IVV +D GV N+ ++DA G + K ++P+ + F EK F G SN P+ Sbjct: 93 IVVPIYEEDITGVYYNTAAVIDADGTYLGKYRKTHIPHVAGFWEKFFFKPGASNWPVFET 152 Query: 141 RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + +LG+ IC D + L GAE++ + +A+ Sbjct: 153 QYCKLGVYICYDR-HFPEGWRALALNGAEYIVNPSAT 188 >gi|328866226|gb|EGG14611.1| nitrilase 2 [Dictyostelium fasciculatum] Length = 450 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 20/168 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAG-NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 + KLK A QL +VGD NI A +A +EA+ G LI E F P VFK+ Sbjct: 165 MDKLKFAGLQL--LVGDSKKENIENAYKAIKEASSNGAQLICLPECF--NCPYSTAVFKE 220 Query: 61 -SFIQACSSAIDTLKSDTHDG---GAGIVVG-FPRQDQEGVLNSV-----VILDAGNIIA 110 S I ++ DT +H G I+ G P + +G L+++ V +G ++A Sbjct: 221 YSEIVDANNLGDTTTMLSHAAKEFGVWIIGGSIPERSAQGDLDNIYNTCTVFNPSGELVA 280 Query: 111 VRDK-----INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 K IN+P +F E + G + I +++GI IC D+ Sbjct: 281 THRKVHLFDINVPGRIKFCESDSLTRGDTPTVIDVNGVKIGIGICYDV 328 >gi|305431763|ref|ZP_07400930.1| amidohydrolase [Campylobacter coli JV20] gi|304444847|gb|EFM37493.1| amidohydrolase [Campylobacter coli JV20] Length = 283 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 11/176 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K LK+A+ Q P ++ N+ KA + A QG LI+ EL+ S Y ED K Sbjct: 1 MQKLLKVALIQFAPKSYEVQNNLDKALKLAHLALEQGARLIVLPELYDSAYCVEDQDEKF 60 Query: 61 SF-IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S + +D L+ + A IV +D + + +S I+ ++ V KI L Sbjct: 61 SLNLHQAHPNLDALQKLAKNYQAYIVACSIEKDTQ-LYDSAYIISHKGLLGVYRKIYLWG 119 Query: 120 YSEFHEKRTFISG--YSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFL 171 +EK F G Y + F + ++LG+ IC +I S + L QGAE + Sbjct: 120 ----NEKERFARGDKYPIFELEFENFKLKLGLQICYEI-GFSEGSRFLALQGAEII 170 >gi|258620098|ref|ZP_05715137.1| NH(3)-dependent NAD(+) synthetase [Vibrio mimicus VM573] gi|258624902|ref|ZP_05719830.1| NH(3)-dependent NAD(+) synthetase [Vibrio mimicus VM603] gi|258582900|gb|EEW07721.1| NH(3)-dependent NAD(+) synthetase [Vibrio mimicus VM603] gi|258587456|gb|EEW12166.1| NH(3)-dependent NAD(+) synthetase [Vibrio mimicus VM573] Length = 276 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 36/221 (16%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQ---------TIMLPYKYTSPQSLEDAA----- 340 +++G+SGG+DS C +A A+ + N Q + LPY ++ A Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTSEYQFIAVRLPYGEQKDEAEAQLALSFIR 99 Query: 341 -ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI--VAENIQSRIRGNILMALSNH 397 + + ++ K V +H + + + +P+ I + N+++R R ++ + Sbjct: 100 PSHSVSVNIKAGVDGLHAASQQALA-NTDLVPNDPAKIDFIKGNVKARARMVAQYEIAGY 158 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 159 VGGLVLGTDHSAENITGFYTKFGDGACDLAPLYGLNKRQVRLLAETLGA----------- 207 Query: 458 EVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 208 ---PAQLVHKTPTADLEELAPLKADETALNLTYEQIDDFLE 245 >gi|254976445|ref|ZP_05272917.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile QCD-66c26] gi|255093830|ref|ZP_05323308.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile CIP 107932] gi|255315581|ref|ZP_05357164.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile QCD-76w55] gi|255518241|ref|ZP_05385917.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile QCD-97b34] gi|255651360|ref|ZP_05398262.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile QCD-37x79] gi|260684419|ref|YP_003215704.1| nitrilase [Clostridium difficile CD196] gi|260688078|ref|YP_003219212.1| nitrilase [Clostridium difficile R20291] gi|306521190|ref|ZP_07407537.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile QCD-32g58] gi|260210582|emb|CBA65158.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile CD196] gi|260214095|emb|CBE06286.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile R20291] Length = 308 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 32/50 (64%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K ++IA+ Q +PV+ D+ + KA +EA R+G ++++F E FI YP Sbjct: 6 KNVRIAVVQASPVIMDLEKTVEKALGLIKEAGRKGANIVVFPEAFIPAYP 55 >gi|300780540|ref|ZP_07090395.1| NAD(+) synthase [Corynebacterium genitalium ATCC 33030] gi|300533526|gb|EFK54586.1| NAD(+) synthase [Corynebacterium genitalium ATCC 33030] Length = 292 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 62/281 (22%), Positives = 111/281 (39%), Gaps = 43/281 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ----- 322 P + + A V L DY+ ++G+SGG DS L +A A+ K Sbjct: 32 PFIDPAEEVAARVDFLADYLAVTGARGYVLGISGGQDSTLAGRLAQLAVEKVRANDPSSE 91 Query: 323 ----TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF--SLMSQFLQEEPSG 376 + LP+ S + +DA + V +L ++ + +E + Sbjct: 92 CQFVAVRLPHGVQSDE--DDAQLALDFIQPDRRVTVDIELATTAMARTVAAALDGDELTD 149 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 N+++R+R A++ +++ T + +E G+ T +GD + PL L K Q Sbjct: 150 FNKGNVKARMRMIAQYAIAGELGLLVVGTDHAAENVTGFFTKFGDGAADLVPLAGLNKRQ 209 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDI 492 QL + + EK P+A+L RP D+E+L YP +DD Sbjct: 210 GAQLLEHLGAD--------------KRLYEKVPTADLEDDRPALPDEEALGITYPHIDDY 255 Query: 493 IKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAP 533 ++ ++ D+ + +EHL ++KR P Sbjct: 256 LE------------GKQVPDDAAQRLEHLWAVGQHKRHLPP 284 >gi|170692947|ref|ZP_02884108.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia graminis C4D1M] gi|170141945|gb|EDT10112.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia graminis C4D1M] Length = 285 Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS--F 62 L+IA AQ PV GD+ NI K A +G L++F E F+SGY P + + Sbjct: 13 LQIAAAQALPVCGDVTANIMKTVELTGLAADRGARLVVFPEKFLSGYEPGLIAGDPAQYA 72 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD 104 + + +D ++ G +VG + +G+ S ++ D Sbjct: 73 FELADARLDPIREICRRRGIAAIVGAATRGADGLRISSLVFD 114 >gi|195978675|ref|YP_002123919.1| NAD synthetase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|238689831|sp|B4U4I9|NADE_STREM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|195975380|gb|ACG62906.1| NH(3)-dependent NAD(+) synthetase NadE [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 274 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 42/232 (18%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y+ K+ F K ++G+SGG DS+L +A A+ G E Q + LPY + Sbjct: 30 LKAYLLKHPFLKTYVLGISGGQDSSLAGKLAQMAIEELRAETGDEQYQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRI 386 D A KAL + P L VN ++ Q E +G+ NI++R Sbjct: 90 -----DEADAQKALAF---IQPDQALTVNIKEAVDGQLRALETAGLEISDFNKGNIKARQ 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R A++ + ++ T + +E G+ T +GD PL L K R Sbjct: 142 RMISQYAIAGQTAGAVIGTDHAAENVTGFFTKFGDGGADILPLFRLTK---------RQG 192 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + L PS+ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 193 KALLKALKA-----DPSLYEKVPTADLEDKKPGLADEVALGVSYQEIDDYLE 239 >gi|70983001|ref|XP_747028.1| nitrilase [Aspergillus fumigatus Af293] gi|66844653|gb|EAL84990.1| nitrilase, putative [Aspergillus fumigatus Af293] Length = 318 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 14/134 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-------PPE 54 + K+++ Q PV D+ G++AK + +EA +G++++ F E++I GY P Sbjct: 1 MTKVRVGAVQAEPVWNDLQGSVAKTIKLIKEAGEKGINVLGFPEVWIPGYLWSMWTNSPI 60 Query: 55 DLV-----FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 D V + + + S +D +++ + G IV+G+ +D + + I G I Sbjct: 61 DNVQLLHEYMANSLVRNSPEMDAIRAAVREAGIFIVLGYSERDAGSIYMAQSFISPEGEI 120 Query: 109 IAVRDKINLPNYSE 122 + R K+ P + E Sbjct: 121 VHHRRKLK-PTHVE 133 >gi|300088100|ref|YP_003758622.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527833|gb|ADJ26301.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 257 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 18/256 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+ L P +G+I N A E+ +G +++ E + GY + + Sbjct: 1 MKSYRVALLHLAPELGEIEKNRRAVEFAVRESAARGAGIVVTPETVVPGYHFAEAI-GTD 59 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILD-AGNIIAVRDKINL 117 +I+ A +D+ G G+ + Q++ + N+V LD G + K+ + Sbjct: 60 WIEPQPDAWLRRMADSA-GQLGVNLFLSYQERTADNRLFNTVFCLDNTGRVAGTHRKMGI 118 Query: 118 PNYSEFHEKRTFI-SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 S H + +G + I ++ GIL+C D W + L+ GAE L S A Sbjct: 119 ---SAGHTAEAWADAGERVEVIECDGLKAGILVCADTWGPHHAAT-LRAAGAEVLISPAA 174 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD-GAS-FCFDGQQQLAFQMK 234 P + E + + LP+ N+ G + L F G S DG++ L + Sbjct: 175 WPPRPCPPEGCWEKRSAETG---LPVWVCNRTGFEPGLDFTYGESVVALDGRRLLEY--A 229 Query: 235 HFSEQNFMTEWHYDQQ 250 + + +W +D + Sbjct: 230 EAAPAILLFDWDFDTR 245 >gi|323339399|ref|ZP_08079682.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus ruminis ATCC 25644] gi|323093164|gb|EFZ35753.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus ruminis ATCC 25644] Length = 275 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 103/253 (40%), Gaps = 35/253 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT-- 323 +P + E + V ++ Y+ K F K +++G+SGG DS LC + A+ + +T Sbjct: 15 LPEIDPEKEIRRSVDFIKAYLLKYPFFKSIVLGISGGQDSTLCGTLCQKAISELREETGN 74 Query: 324 -------IMLPY-KYTSPQSLEDAAACAKA-LGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 + LPY Q DA KA + ++ P D + + + Sbjct: 75 SDYKFIAVRLPYGDQADEQDAMDAIEFMKADKTVRVNIKPSSDAMMEAVEANGLTVSDFN 134 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 G NI++R R A++ + T + +E G+ T YGD PL L K Sbjct: 135 KG----NIKARERMIAQYAIAGSENGAVAGTDHAAEAVTGFYTKYGDGGADICPLWRLDK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P + K+P+A+L RP D+ +L Y +D Sbjct: 191 ---------RQGRAMLKLLGA-----PEHLYLKTPTADLEEDRPALPDEAALGVTYKDID 236 Query: 491 DIIK-RIVENEES 502 D ++ R VE + + Sbjct: 237 DYLEGREVEEKAA 249 >gi|241667004|ref|YP_002985088.1| NAD+ synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862461|gb|ACS60126.1| NAD+ synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 277 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 14/168 (8%) Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ-------TIMLPYKYTSPQSLED 338 Y+++ + ++G+SGG+DS + +A A+ + + LPY + ++ D Sbjct: 34 YLRQASCRTFVLGISGGVDSLVAGLLAQAAVSEVRADGCDAQFIAVRLPYGVQADET--D 91 Query: 339 AAACAKALG----CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 A +G D+ P D +++ + ++ NI++R R A Sbjct: 92 AQKSLDVIGPDRVVTVDIQPAADAMLDAVMAEGEDLVEPARKHFHLGNIKARQRMVAQYA 151 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 L+ ++ +++ T +E +G+ T +GD + PL L K +V +A Sbjct: 152 LAGSTRGLVIGTDQAAEALMGFFTKFGDGAADILPLAGLTKRRVRAMA 199 >gi|315302611|ref|ZP_07873420.1| NAD+ synthetase [Listeria ivanovii FSL F6-596] gi|313629018|gb|EFR97342.1| NAD+ synthetase [Listeria ivanovii FSL F6-596] Length = 275 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 34/269 (12%) Query: 274 ADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--------- 323 A+ V L+ Y+ KN F K ++G+SGG DS L +A A+ + +T Sbjct: 22 AEIRKSVDFLKAYLTKNPFLKSFVLGISGGQDSTLAGKLAQMAISELRAETADEEYQFFA 81 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 + LPY +S A + V I V+ + +S+ E S N + Sbjct: 82 VSLPYGIQLDESDRQDALDFMQPDNRLTV-NIKASVDASVAALSE-AGVELSDFAKGNEK 139 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R R + A++ +K +++ T + +E G+ T YGD NPL L K Sbjct: 140 ARERMKVQYAIAAMNKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNK--------- 190 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 R + LG P + K P+A+L +++ P P D++ + N+ Sbjct: 191 RQGKALLKELG-----CPEHLYMKKPTADL------EDNKPALP--DEVALGVTYNQIDD 237 Query: 504 INNDQEYNDETVRYVEHLLYGSEYKRRQA 532 + E +E+ +E+KR A Sbjct: 238 YLEGKTVPAEAAAKIENWFIKTEHKRHMA 266 >gi|310765824|gb|ADP10774.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Erwinia sp. Ejp617] Length = 286 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 7/152 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF--KKS 61 KLK+A+AQ V GDI N+ ++ A G ++L E F+SGY P + + Sbjct: 12 KLKVAVAQAESVAGDIPANVQQSVTLIARAAELGAKVVLLPEKFLSGYEPSLIKADPARY 71 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPNY 120 I A + + V+G Q++ GV + S+ G + A K L + Sbjct: 72 AISANDERLKPIAMACRQAAIFAVIGAATQEETGVCITSLCFNPQGELFARYHKRALFS- 130 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 E F G I LG+ IC D Sbjct: 131 ---SEAEFFQPGQQAVAIEVEGWSLGMAICYD 159 >gi|317010975|gb|ADU84722.1| carbon-nitrogen hydrolase [Helicobacter pylori SouthAfrica7] Length = 292 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 11/122 (9%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 NS V+ + G+I V K+++P+ F+EK F G +P+ +LG+++C D W Sbjct: 98 NSAVVFEKDGSIAGVYRKMHIPDDPGFYEKFYFTPGDLGFEPVTTSVGKLGLMVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYH---NKLKKRHEIVTGQISHVH-----LPIIYVNQ 207 + + +GAE L +A + N+ KKR + I H LP+I N+ Sbjct: 157 YPEAARIMALKGAEILIYPSAIGFLEEDSNEEKKRQQNAWETIQRGHAIANGLPLIATNR 216 Query: 208 VG 209 VG Sbjct: 217 VG 218 >gi|126700458|ref|YP_001089355.1| nitrilase [Clostridium difficile 630] gi|255102015|ref|ZP_05330992.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile QCD-63q42] gi|255307883|ref|ZP_05352054.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile ATCC 43255] gi|115251895|emb|CAJ69730.1| Nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile] Length = 308 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 32/50 (64%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K ++IA+ Q +PV+ D+ + KA +EA R+G ++++F E FI YP Sbjct: 6 KNVRIAVVQASPVIMDLEKTVEKALGLIKEAGRKGANIVVFPEAFIPAYP 55 >gi|27903505|gb|AAO24770.1| D-N-carbamoylase [Arthrobacter crystallopoietes] Length = 315 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 27/193 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGN------IAKARRAREEANRQGMDLILFTELFISGYPP- 53 M K L +A+AQ VG I + +A+ EEA QG +L++F EL ++ + P Sbjct: 1 MAKNLMLAVAQ----VGGIDSSESRPEVVARLIALLEEAASQGAELVVFPELTLTTFFPR 56 Query: 54 ---EDLVFKKSFIQAC-SSAIDTLKSDTHDGGAGIVVGFPR--QDQEGVLNSVVILDAGN 107 E+ F++ F ++ + + L D G G +G+ D++ S+++ G+ Sbjct: 57 TWFEEGDFEEYFDKSMPNDDVAPLFERAKDLGVGFYLGYAELTSDEKRYNTSILVNKHGD 116 Query: 108 IIAVRDKINLPNYSEFH--------EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSN 158 I+ K++LP +++ EK+ F G + F +++G+ +C D + Sbjct: 117 IVGKYRKMHLPGHADNREGLPNQHLEKKYFREGDLGFGVFDFHGVQVGMCLCND-RRWPE 175 Query: 159 ICKHLKKQGAEFL 171 + + L QGAE + Sbjct: 176 VYRSLALQGAELV 188 >gi|66793382|ref|NP_991174.2| omega-amidase NIT2 [Danio rerio] gi|82226300|sp|Q4VBV9|NIT2_DANRE RecName: Full=Omega-amidase NIT2; AltName: Full=Nitrilase homolog 2 gi|66267244|gb|AAH94964.1| Nitrilase family, member 2 [Danio rerio] Length = 277 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 19/207 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K ++A+ QL+ V A N+ +A+ +EA QG +++ E F S P F K Sbjct: 1 MSKFRLAVVQLH-VSKIKADNLGRAQTLVKEAAGQGAKVVVLPECFNS---PYGTGFFKE 56 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKINL- 117 + + + S+T +VG P +D + N+ + G ++ KI+L Sbjct: 57 YAEKIPGESTQVLSETAKKCGIYLVGGSIPEEDGGKLYNTCSVFGPDGTLLVTHRKIHLF 116 Query: 118 ----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-- 171 P F E T G S ++G+ IC DI + + + + K+G + L Sbjct: 117 DIDVPGKIRFQESETLSPGKSLSMFETPYCKVGVGICYDI-RFAELAQIYAKKGCQLLVY 175 Query: 172 ---FSLNASPYYHNKLKKRHEIVTGQI 195 F++ P H +L +R V Q+ Sbjct: 176 PGAFNMTTGP-AHWELLQRGRAVDNQV 201 >gi|295681260|ref|YP_003609834.1| NAD+ synthetase [Burkholderia sp. CCGE1002] gi|295441155|gb|ADG20323.1| NAD+ synthetase [Burkholderia sp. CCGE1002] Length = 286 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 26/225 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQ----TIMLPYKYTSPQS 335 L DY+ H ++G+SGG+DS+ A +AV+ L + + LPY S + Sbjct: 39 LGDYLASQGLHTYVLGISGGVDSSTAGRLAQLAVERLRATGYEAHFVAVRLPYG--SQRD 96 Query: 336 LEDAAACAKALGCKYDVL-----PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 EDAAA + + P +++ Q++ + V NI++R R Sbjct: 97 EEDAAAALAFIRPDETLTVNIKEPADAMLSSLKRGNVQYVDDFHEDFVLGNIKARQRMIA 156 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +++ T + +E +G+ T +GD PL L K +V LA H + Sbjct: 157 QYAIAGARVGVVIGTDHAAESLMGFFTKFGDGGADILPLAGLTKRRVRALA-----HALG 211 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 + L + +P + LE L P + D++S Y +DD ++ Sbjct: 212 AS-ERLVDKVPTADLES-----LTPQKPDEDSYGISYQDIDDFLE 250 >gi|320009303|gb|ADW04153.1| NAD+ synthetase [Streptomyces flavogriseus ATCC 33331] Length = 276 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 38/252 (15%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVD---ALGKE-NVQ 322 E E + V L + + +++G+SGG+DS LC +AV+ A G E Sbjct: 24 EAEKEIERRVAFLTERLASTGLRSLVLGISGGVDSTTAGRLC-QLAVERARAAGHEARFY 82 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKY----DVLPIHDLVNHFFSLMS---QFLQEEPS 375 + LPY + + DA + + D+ P D SL++ F Sbjct: 83 AMRLPYGVQADE--HDAQLALSFIRADHVLTVDIRPATDATRE--SLLTGDVAFRDPHHQ 138 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 V N+++R R A++ +++ T + +E G+ T +GD + PL L K Sbjct: 139 DFVLGNVKARQRMIAQYAVAGAHNGLVVGTDHAAEAVSGFFTKFGDGAADLVPLTGLTKR 198 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDD 491 +V +A + P ++ K P+A+L P + D+ +L Y +DD Sbjct: 199 RVRAVAETLGA--------------PAELVGKVPTADLETLAPGKADEHALGVTYDAIDD 244 Query: 492 IIKRIVENEESF 503 ++ +E++F Sbjct: 245 FLEGKPVDEQTF 256 >gi|78221930|ref|YP_383677.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter metallireducens GS-15] gi|78193185|gb|ABB30952.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter metallireducens GS-15] Length = 294 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 61/281 (21%), Positives = 115/281 (40%), Gaps = 25/281 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + KL + + Q D N+AK+ +A+ G L++ EL Y ED Sbjct: 1 MSKLTVGLVQ-QSCTSDKDLNLAKSIENIRKASALGAKLVVLQELHCGPYFCQNEDTGHF 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINL 117 + + L + G +V + G+ N+ V+ + G+I K+++ Sbjct: 60 DLAEEIPGPTTELLGGVAREFGVVLVSSLFEKRASGIYHNTAVVFEKDGSIAGKYRKMHI 119 Query: 118 PNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 P+ ++EK F G +PI +LG+L+C D W + + GA+ L A Sbjct: 120 PDDPGYYEKFYFTPGDLGFEPIRTSVGKLGVLVCWDQW-YPEAARLMALAGADLLIYPTA 178 Query: 177 SPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------LIFDGASF 221 + K++++ +T Q H +P++ VN+VG + + +F G+SF Sbjct: 179 IGWDPRDEDEEKVRQKEAWITIQRGHAVANGIPVVSVNRVGLEPDPSGVLPGSLFWGSSF 238 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ---WNYMSD 259 Q ++ Q + E+ E D+ + W ++ D Sbjct: 239 VAGPQGEILTQASNDREELLSVELDLDRSEAVRRIWPFLRD 279 >gi|284028994|ref|YP_003378925.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Kribbella flavida DSM 17836] gi|283808287|gb|ADB30126.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Kribbella flavida DSM 17836] Length = 316 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 19/157 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY------PPEDLVF 58 L+ A+ Q PV D N++ RR ++A QG L++F E+ + GY P L Sbjct: 2 LRTAVVQFEPVPDDPETNLSTVRRLAQQAVDQGAQLVVFPEMCLLGYWHLRRHPAARL-- 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 + I +++ + GAG+ VG+ D + N+ + + V K+ Sbjct: 60 HELAEPRTGPGISAVRALARELGAGLGVGWLEADAGRLFNAYAVCLPDGELHVHRKL--- 116 Query: 119 NYSEFHEKRTFISGYSNDPIVF---RDIRLGILICED 152 ++ HE + G++ VF +R+GILIC D Sbjct: 117 -HAFEHEAISSGDGFT----VFDTPWQVRVGILICWD 148 >gi|207857181|ref|YP_002243832.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690407|sp|B5QWI3|NADE_SALEP RecName: Full=NH(3)-dependent NAD(+) synthetase gi|206708984|emb|CAR33314.1| NAD+ synthase [glutamine-hydrolysing] [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 275 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 41/218 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLETYPFLKSLVLGISGGQDSTLAGKLSQMAIAELREETGDNALQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMS--QFLQE---EPSGIVAENIQSRI 386 D C A+ + P L VN ++++ Q L+E E S V N ++R Sbjct: 90 -----DEQDCQDAIAF---IQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARE 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 142 RMKAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + LG P + +K P+A+L + D+ SLP Sbjct: 196 ---LAALG-----CPEHLYKKVPTADL---EDDRPSLP 222 >gi|154492534|ref|ZP_02032160.1| hypothetical protein PARMER_02168 [Parabacteroides merdae ATCC 43184] gi|154087759|gb|EDN86804.1| hypothetical protein PARMER_02168 [Parabacteroides merdae ATCC 43184] Length = 291 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 17/163 (10%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 +VVI G I K+++P+ ++EK F G +PI +LG+L+C D W Sbjct: 97 TAVVIEKDGAIAGKYRKMHIPDDPAYYEKFYFTPGDLGFEPIETSVGKLGVLVCWDQWY- 155 Query: 157 SNICKHLKKQGAEFL-----FSLNASPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQV 208 + + +GAE L +S K ++ VT Q H LP++ VN+V Sbjct: 156 PEAARLMAMKGAELLIYPTAIGWESSDTEEEKKRQLGAWVTVQRGHAVANGLPVVTVNRV 215 Query: 209 GGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 G + + + F G SF Q +L ++ + E+ + E Sbjct: 216 GHEADPSRQTNGIQFWGNSFVAGPQGELLAELSNNDEEIRIVE 258 >gi|113867936|ref|YP_726425.1| carbon-nitrogen hydrolase [Ralstonia eutropha H16] gi|113526712|emb|CAJ93057.1| Carbon-nitrogen hydrolase [Ralstonia eutropha H16] Length = 338 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 22/171 (12%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------- 52 + ++ A Q+ P + AG +AK A +EA +G+ LI+F E F+ YP Sbjct: 5 RIVRAAAVQIAPDLESGAGTLAKVCEAIDEAAGKGVQLIVFPETFVPYYPYFSFVRPPVH 64 Query: 53 --PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 + + + + D + G +V+G +D + N+ +I D GN+ Sbjct: 65 SGSDHMRLYEQAVVVPGPVTDAVAGRARRHGMVVVLGVNERDHGSLYNTQLIFDTEGNLA 124 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 R KI FHE+ + G + V R+G L C W++ N Sbjct: 125 VKRRKIT----PTFHERMIWGQGDAAGLKVADTAIGRVGALAC---WEHYN 168 >gi|294499620|ref|YP_003563320.1| carbon-nitrogen family hydrolase [Bacillus megaterium QM B1551] gi|294349557|gb|ADE69886.1| hydrolase, carbon-nitrogen family [Bacillus megaterium QM B1551] Length = 260 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 49/229 (21%), Positives = 103/229 (44%), Gaps = 21/229 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--------DL 56 +KIA+ QL+ +G+ N A+ +A + D+++ E++ +GY E + Sbjct: 1 MKIALIQLDVKIGEPDWNYQHAKTLMSKAMKDKPDIVVLPEMWNTGYALERAQELGDRNG 60 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI 115 V K + + + + T GG+ ++ + QE V N++++ + G + DKI Sbjct: 61 VLTKELLSSFAKEHNI----TVVGGS--ILNYRSHRQE-VTNTMLVFNGQGEQVLEYDKI 113 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +L + E + +G ++DI++G +IC D+ + + + L GA+ L +N Sbjct: 114 HL--FRLMDEDKFLKAGNRFGLFSYQDIKIGTMICYDL-RFPQLSRKLVNDGAQML--IN 168 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + ++ ++ + +I VN+ G + F G S D Sbjct: 169 VAQWPTARVDHWRSLLIARAIENQCFVIAVNRCGESEGTHFPGNSMVID 217 >gi|237785993|ref|YP_002906698.1| NAD synthetase [Corynebacterium kroppenstedtii DSM 44385] gi|237758905|gb|ACR18155.1| NAD-synthetase [Corynebacterium kroppenstedtii DSM 44385] Length = 326 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 104/270 (38%), Gaps = 59/270 (21%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ--------TIMLPYKYTSPQ 334 L +Y+ I+G+SGG DS L +A A+ + Q + LPY Q Sbjct: 80 LAEYLISTEARGFILGISGGQDSTLAGRLAQLAVERVREQEGTKVRFHAVRLPY---GEQ 136 Query: 335 SLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA------ENIQS 384 + ED A +AL + + I D +S L GI N+++ Sbjct: 137 ADEDDAQ--RALNFIEPDRTVAINIKDATQALTKTVSASL-----GIHCLTDFNRGNVKA 189 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 RIR A + +++ T + +E G+ T YGD PL L K Q Sbjct: 190 RIRMVAQYAAAGQLGLLVVGTGHAAEAVTGFYTKYGDGGADILPLSGLTKRQ-------- 241 Query: 445 NSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVEN 499 G L E+ PPS K P+A+L RP D+++L Y +DD Sbjct: 242 -------GAALLQELGAPPSTWSKVPTADLEDNRPALPDEDALGVTYSQIDD-------- 286 Query: 500 EESFINNDQEYNDETVRYVEHLLYGSEYKR 529 ++ E + +EHL S +KR Sbjct: 287 ---YLEGVDGLPQEAIDRIEHLYTVSRHKR 313 >gi|327354103|gb|EGE82960.1| hypothetical protein BDDG_05904 [Ajellomyces dermatitidis ATCC 18188] Length = 703 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 84/374 (22%), Positives = 135/374 (36%), Gaps = 70/374 (18%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN V D GN + + A G L + EL I+GY +D + Sbjct: 1 MAPLVTVATCSLNQWVLDFEGNTNRIIDSIRIAKAAGAKLRVGPELEITGYSCQDHFLEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I T+ I +G P + N+ + + I+ ++ K+ L Sbjct: 61 DLYLHVWQCIATIVDHPDCQDILIDIGAPIR-----YNARIHILNRKILLIKPKMWLAGD 115 Query: 121 SEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWK 155 + ++E R F I+G + PI D +GI CE+++ Sbjct: 116 ANYYEYRWFTPWAKPRYVEDYYLERIVGGITGQATVPIGDAVISTYDSAIGIETCEELFT 175 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDE 213 SN H+ G E + + S + KLK+R +++ + +Y NQ G G Sbjct: 176 PSNPGIHMGLNGVEIFTNSSGSHHELRKLKQRIDLIR-HCTRGGGIYLYANQRGEDGNGR 234 Query: 214 LIFDGASFCFDGQQQLA----FQMKHF----------SEQNFMTEWHYDQQLSQW----- 254 L FDG++ F + + F +K ++F T Q SQ Sbjct: 235 LYFDGSAGIFVNGRVVGMSSQFSLKDVDVVTAVIDLEEVRSFRTSVSRSSQGSQAPAYQR 294 Query: 255 ----------------NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 N Y +EE A AC L DY++++ + Sbjct: 295 IEAPISLSRKSDSLNPNIQPSPDIELEYHSPEEEIALGPACW--LWDYLRRSRQSGFFLP 352 Query: 299 LSGGIDSALCAAIA 312 LSGG+DSA A I Sbjct: 353 LSGGLDSASVAVIT 366 >gi|295666007|ref|XP_002793554.1| glutamine-dependent NAD(+) synthetase [Paracoccidioides brasiliensis Pb01] gi|226277848|gb|EEH33414.1| glutamine-dependent NAD(+) synthetase [Paracoccidioides brasiliensis Pb01] Length = 669 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 88/388 (22%), Positives = 141/388 (36%), Gaps = 86/388 (22%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A LN V D GN + + A G L + EL I+GY +D + Sbjct: 1 MAPLVTVATCSLNQWVLDFEGNTTRIIESIRIAKAAGAKLRVGPELEITGYSCQDHFLEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPR-----QDQEGVLNSVVILDAGNIIAVRDKI 115 I T+ I +G P + + N+ + + I+ ++ K+ Sbjct: 61 DLYLHVWQCIATIVDHPDCQDILIDIGAPSDAYKVRHRNIRYNARIHILNRKILLIKPKM 120 Query: 116 NLPNYSEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILIC 150 L + ++E R F I+G + PI D +GI C Sbjct: 121 WLAGDANYYEYRWFTPWAKPRHVEEYHLERIVGNITGQATVPIGDAVISTYDSTIGIEAC 180 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK--------RHEIVTGQISHVHLPI 202 E+++ SN H+ G E +F+ ++ + H++L+K RH G I Sbjct: 181 EELFTPSNPGIHMGLNGVE-IFTNSSGSFQHHELRKLKQRIELIRHCTRGGGI------Y 233 Query: 203 IYVNQVG--GQDELIFDGASFCFDGQQQLA----FQMKHFSE----------QNFMTEWH 246 +Y NQ G G L FDG++ F + + F +K ++F T Sbjct: 234 LYANQRGEDGNGRLYFDGSAGIFVNGRVVGMSSQFSLKDVDVVTAVVDLEEVRSFRTSVS 293 Query: 247 YDQQLSQWNYM----------------------SDDSASTMYIPLQEEEADYNACVLSLR 284 Q SQ S D + P +EE A AC L Sbjct: 294 RSVQASQAPVYQRIEAQISLSKKSDAFNPSIKPSPDIELNFHTP-EEEIALGPACWLW-- 350 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIA 312 DY++++ + LSGG+DSA A I Sbjct: 351 DYLRRSRQSGFFLPLSGGLDSASVAVIT 378 >gi|224539964|ref|ZP_03680503.1| hypothetical protein BACCELL_04876 [Bacteroides cellulosilyticus DSM 14838] gi|224518418|gb|EEF87523.1| hypothetical protein BACCELL_04876 [Bacteroides cellulosilyticus DSM 14838] Length = 294 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+ I Q D+ N+ ++ E G LI+ EL S Y Sbjct: 1 MRKIKVGIIQ-QANTADLRTNLMNLAKSIEACAAHGAQLIVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ D G+ Sbjct: 50 FCQTENTQLFDLAETIPGPSTGFYSELAAANKIVLVTSLFEKRAPGLYHNTAVVFDRDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE----- 213 GAE L A + + K ++ + + Q +H LP+I VN+VG + + Sbjct: 169 GAELLIYPTAIGWESSDADDEKARQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSMQT 228 Query: 214 --LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + F G SF Q + Q + +N + E Sbjct: 229 NGIQFWGNSFVAGPQGEFLAQAGNDRPENIVVE 261 >gi|40890157|gb|AAR97423.1| nitrilase [uncultured organism] Length = 340 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 29/192 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 ++ A QL+PV+ G K +A A ++G L++F E FI YP P L+ Sbjct: 8 IRAAAIQLSPVLFSRDGTTEKVLQAIASAAKEGAQLVVFPETFIPYYPYFSFIQPPVLMG 67 Query: 59 KKSF------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 K+ + D + G +V+G +D + N+ +I DA G ++ Sbjct: 68 KEHMRLYEEAVTVPGPVTDAVSRAARSYGMVVVLGVNERDGGSIYNTQLIFDADGTLLLK 127 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN-------ICKH 162 R KI P Y HE+ + G V ++G L C W++ N + +H Sbjct: 128 RRKIT-PTY---HERMVWGQGDGAGLKVLDTAVGKVGALAC---WEHYNPLARFALMAQH 180 Query: 163 LKKQGAEFLFSL 174 + A+F SL Sbjct: 181 EQIHCAQFPGSL 192 >gi|148263513|ref|YP_001230219.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter uraniireducens Rf4] gi|146397013|gb|ABQ25646.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacter uraniireducens Rf4] Length = 294 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 25/253 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K L + + Q + D I K+ A +G +L++ EL Y F ++ Sbjct: 1 MKNLTVGLVQQS-CTADRNATIEKSMAGIRTAAAKGTELVVLQELHCGPY------FCQT 53 Query: 62 FIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAV 111 +C A + + + G IV + G+ N+ V+L+ G+I Sbjct: 54 EDTSCFDRAEPIPGPATEQFGALARELGVVIVTSLFERRAPGLYHNTAVVLEKDGSIAGK 113 Query: 112 RDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K+++P+ F+EK F G +PI +LG+L+C D W Sbjct: 114 YRKMHIPDDPAFYEKFYFTPGDLGFEPIQTSVGKLGVLVCWDQWYPEAARLLALAGAELL 173 Query: 171 LF--SLNASPYYHNKLKKRH--EIVTGQISHV---HLPIIYVNQVGGQDELIFDGASFCF 223 ++ ++ P + KKR +T Q SH +P++ VN+VG + + GA F Sbjct: 174 IYPTAIGWDPNDTDAEKKRQLDAWITIQRSHAVANGIPLVSVNRVGFEADPSGAGAGIDF 233 Query: 224 DGQQQLAFQMKHF 236 G +A F Sbjct: 234 WGNSFVAGPQGEF 246 >gi|332523896|ref|ZP_08400148.1| NAD+ synthase [Streptococcus porcinus str. Jelinkova 176] gi|332315160|gb|EGJ28145.1| NAD+ synthase [Streptococcus porcinus str. Jelinkova 176] Length = 274 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 44/262 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y+ K++F K +++G+SGG DS L +A A+ + ++T Y++ + P ++ Sbjct: 30 LKAYLTKHSFLKTLVLGISGGQDSTLAGRLAQMAIEELRMETGRKDYQFIAIRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL + P L +N ++ Q E +GI NI++R R Sbjct: 90 DEADAQKALAF---IRPDKTLTINIKQAVDGQVSALEATGIEISDFNKGNIKARQRMVSQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAVAGQLNGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINND 507 LG S+ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 198 ELGA-----SASLYEKIPTADLEENKPGIADEVALGVTYKDIDDYLE------------G 240 Query: 508 QEYNDETVRYVEHLLYGSEYKR 529 +E +D+ +E Y +KR Sbjct: 241 KEVSDQAKEKIETWWYKGLHKR 262 >gi|253744923|gb|EET01057.1| NH3-dependent NAD synthetase [Giardia intestinalis ATCC 50581] Length = 287 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 44/226 (19%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN---VQTIMLPYKYTSP 333 N V +L Y + + ++ LSGGIDSA+ A+ A EN + + + +S Sbjct: 29 NKKVDALNQYAKASGIAGCVVNLSGGIDSAVTFALLSRAKATENSPITRVLGIAQPISST 88 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 S+++ A + G +++ + F L++ L E+ GI + N++S +R Sbjct: 89 TSIQNRAYELSSYG---EIVTVDQ--TEIFGLLAP-LVEDACGIRGKEFARGNLKSYMRT 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGT------LY-----GDMSGGFNPLKDLYKTQV 437 + ++ LL+ + VG G LY GD + DL+K++V Sbjct: 143 PVAFYVTQ-----LLSQEGIPSVVVGTGNYDEDGFLYYFSKAGDGVSDIQLIHDLHKSEV 197 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 F + + LG IP SIL PSA+L QTD+ + Sbjct: 198 FAVGRY---------LG-----IPESILNAPPSADLWEGQTDEAEI 229 >gi|255656827|ref|ZP_05402236.1| nitrilase (carbon-nitrogen hydrolase) [Clostridium difficile QCD-23m63] gi|296452341|ref|ZP_06894044.1| Cyanoalanine nitrilase [Clostridium difficile NAP08] gi|296877692|ref|ZP_06901720.1| Cyanoalanine nitrilase [Clostridium difficile NAP07] gi|296258842|gb|EFH05734.1| Cyanoalanine nitrilase [Clostridium difficile NAP08] gi|296431314|gb|EFH17133.1| Cyanoalanine nitrilase [Clostridium difficile NAP07] Length = 308 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 32/50 (64%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K ++IA+ Q +PV+ D+ + KA +EA R+G ++++F E FI YP Sbjct: 6 KNVRIAVVQASPVIMDLEKTVEKALGLIKEAGRKGANIVVFPEAFIPAYP 55 >gi|313624212|gb|EFR94273.1| NAD+ synthetase [Listeria innocua FSL J1-023] Length = 251 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 30/226 (13%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++KN F K ++G+SGG DS L +A A+ + +T + LPY Sbjct: 30 LKAYLKKNTFLKSFVLGISGGQDSTLTGKLAQMAISELRAETGDDEYQFFAVSLPYGTQL 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 +S A A + V I V+ + +++ E S N ++R R + Sbjct: 90 DESDRQDALDFMAPDNRLTV-NIKASVDASVAALAE-AGVELSDFAKGNEKARERMKVQY 147 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A++ K +++ T + +E G+ T YGD NPL F+L + R + Sbjct: 148 AIAAMHKGVVVGTDHSAEAVTGFYTKYGDGGTDINPL--------FRL-NKRQGKALLKE 198 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + K P+A+L +P D+ +L Y +DD ++ Sbjct: 199 LG-----CPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLE 239 >gi|254389493|ref|ZP_05004720.1| hydrolase [Streptomyces clavuligerus ATCC 27064] gi|294815870|ref|ZP_06774513.1| Hydrolase [Streptomyces clavuligerus ATCC 27064] gi|326444211|ref|ZP_08218945.1| hydrolase [Streptomyces clavuligerus ATCC 27064] gi|197703207|gb|EDY49019.1| hydrolase [Streptomyces clavuligerus ATCC 27064] gi|294328469|gb|EFG10112.1| Hydrolase [Streptomyces clavuligerus ATCC 27064] Length = 280 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 18/188 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y PE Sbjct: 1 MTSVVRAALVQAT-WTGDTESMIAKHEEHAREAARQGARVIGFQEVFNAPYFCQVQDPEH 59 Query: 56 LVFKKSFIQACS-SAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDA-GNIIA 110 + + + + + + L +T G+V+ P + EG N+ ++DA G+ + Sbjct: 60 YRWAEPVPEGPTVTRMRELARET-----GMVIVAPVFEIEGSGFYYNTAAVIDADGSYLG 114 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAE 169 K ++P F EK F G + P+ + R+G+ IC D + L GA+ Sbjct: 115 KYRKHHIPQVEGFWEKYYFRPGNAGWPVFETAVGRIGVYICYDR-HFPEGWRQLGLAGAQ 173 Query: 170 FLFSLNAS 177 +++ +A+ Sbjct: 174 LVYNPSAT 181 >gi|255656724|ref|ZP_05402133.1| putative carbon-nitrogen hydrolase [Clostridium difficile QCD-23m63] Length = 268 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 15/256 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+KI I Q + V+GD+ NI KA ++ +QG D+I ELF + Y E L K Sbjct: 1 MGRKVKIGIIQQHSVLGDVKKNIEKAVEMIDDLGKQGADIICLPELFATEYNLESLGGVK 60 Query: 61 S--FIQACSSAIDTLKSDTHDGGAGIVV---GFPRQDQEGVLNSVVILD-AGNIIAVRDK 114 + I+ + I+ S+ ++ G + V NS VI + G I+ K Sbjct: 61 TLELIREHNKYIEKSMSEAAKRNNVYLISPYGTLEKGSTHVYNSAVIFNRKGKIMGEYCK 120 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +L + + F G N + D R G++IC D + + L +G+E +F Sbjct: 121 NHLWSLEAVY----FKVG-ENVEVYEADFGRFGVMICYDA-GFPEVSRELTLKGSEIIFI 174 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +A + + V+ + + + VN V LI G S + + + Q+ Sbjct: 175 PSAWRIQDEDMWDLN--VSQRALENTVYTVGVNLVSNDSNLILFGKSKICNPRGTVITQL 232 Query: 234 KHFSEQNFMTEWHYDQ 249 + E+ ++E D+ Sbjct: 233 DTYREKYVLSEIDLDE 248 >gi|261346599|ref|ZP_05974243.1| nitrilase family protein [Providencia rustigianii DSM 4541] gi|282565304|gb|EFB70839.1| nitrilase family protein [Providencia rustigianii DSM 4541] Length = 343 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 20/147 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF--- 58 L + K A Q PV D + K R EEA G L+ F E+F+SGYP V Sbjct: 4 LPQFKAAAVQAAPVFLDTNATVDKVCRLIEEAADNGAKLVAFPEVFVSGYPYWSWVMNPI 63 Query: 59 --KKSFIQACSSAIDT-------LKSDTHDGGAGIVVGFPRQDQEGVL----NSVVILDA 105 F + C SAI+ + +V+G ++ G+ V I D Sbjct: 64 DGSPWFEKLCKSAIEVPGPEIKRIAQAAARHHINVVIGVNERNPNGIATLYNTLVTISDE 123 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISG 132 G I+ K+ +P ++ EK T+ +G Sbjct: 124 GRILGRHRKL-VPTWA---EKLTWANG 146 >gi|319650597|ref|ZP_08004737.1| hypothetical protein HMPREF1013_01342 [Bacillus sp. 2_A_57_CT2] gi|317397778|gb|EFV78476.1| hypothetical protein HMPREF1013_01342 [Bacillus sp. 2_A_57_CT2] Length = 274 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 35/69 (50%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + ++II SGG+DS +A+D LGKENV I + P LE+ A + Sbjct: 18 SEMERIIIAFSGGVDSTYLLKVALDTLGKENVLAITADSESFPPSELEETIRIANTIDAP 77 Query: 350 YDVLPIHDL 358 + ++ + +L Sbjct: 78 HQIIKMSEL 86 >gi|167763077|ref|ZP_02435204.1| hypothetical protein BACSTE_01444 [Bacteroides stercoris ATCC 43183] gi|167699417|gb|EDS15996.1| hypothetical protein BACSTE_01444 [Bacteroides stercoris ATCC 43183] Length = 294 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 110/273 (40%), Gaps = 42/273 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+ I Q V D+ N+ ++ E G L++ EL S Y Sbjct: 1 MRKIKVGIIQ-QANVADMRINLMNLAKSIESCAAHGAQLVVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ + G+ Sbjct: 50 FCQTENTQLFDLAEPIPGPSTGFYSELAAANNIVLVTSLFEKRAPGLYHNTAVVFERDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDLGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE----- 213 GAE L A + + K+++ + + Q H LP+I VN+VG + + Sbjct: 169 GAELLIYPTAIGWESSDTDDEKVRQLNAWIISQRGHAVANGLPVISVNRVGHEPDPSMQT 228 Query: 214 --LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + F G SF Q + Q + +N + E Sbjct: 229 NGIQFWGNSFVVGPQGEFLAQAGNEQPENIVVE 261 >gi|296452449|ref|ZP_06894150.1| carbon-nitrogen family hydrolase [Clostridium difficile NAP08] gi|296877798|ref|ZP_06901824.1| carbon-nitrogen family hydrolase [Clostridium difficile NAP07] gi|296258779|gb|EFH05673.1| carbon-nitrogen family hydrolase [Clostridium difficile NAP08] gi|296431249|gb|EFH17070.1| carbon-nitrogen family hydrolase [Clostridium difficile NAP07] Length = 279 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 15/256 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+KI I Q + V+GD+ NI KA ++ +QG D+I ELF + Y E L K Sbjct: 12 MGRKVKIGIIQQHSVLGDVKKNIEKAVEMIDDLGKQGADIICLPELFATEYNLESLGGVK 71 Query: 61 S--FIQACSSAIDTLKSDTHDGGAGIVV---GFPRQDQEGVLNSVVILD-AGNIIAVRDK 114 + I+ + I+ S+ ++ G + V NS VI + G I+ K Sbjct: 72 TLELIREHNKYIEKSMSEAAKRNNVYLISPYGTLEKGSTHVYNSAVIFNRKGKIMGEYCK 131 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFS 173 +L + + F G N + D R G++IC D + + L +G+E +F Sbjct: 132 NHLWSLEAVY----FKVG-ENVEVYEADFGRFGVMICYDA-GFPEVSRELTLKGSEIIFI 185 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +A + + V+ + + + VN V LI G S + + + Q+ Sbjct: 186 PSAWRIQDEDMWDLN--VSQRALENTVYTVGVNLVSNDSNLILFGKSKICNPRGTVITQL 243 Query: 234 KHFSEQNFMTEWHYDQ 249 + E+ ++E D+ Sbjct: 244 DTYREKYVLSEIDLDE 259 >gi|78065984|ref|YP_368753.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. 383] gi|77966729|gb|ABB08109.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. 383] Length = 273 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 98/255 (38%), Gaps = 27/255 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KLK+ I QL GD N+ + A G D+++F E ++G+ S + Sbjct: 2 KLKLDIVQLAGRDGDTHYNLQRTLEAIATCA-PGTDIVMFPEAQLTGF------LDPSNL 54 Query: 64 QACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 C+ +D + + +VVG D N+ V + I K +L Sbjct: 55 AECAEPLDGPSVGAVITAARARDVAVVVGLIENDGGRFYNTTVFVTPDGIALRYRKTHL- 113 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL--NA 176 E + G I +R +R+G+LIC D + + L GAE + N Sbjct: 114 ---WVSEHGVVLPGDRYATIEWRGVRIGLLICYD-NEFPETGRALAALGAELILITDGNM 169 Query: 177 SPYYHNKLKKRHEI-VTGQISHVHLPIIYVNQVGGQD-ELIFDGASFCFDGQQQLAFQMK 234 PY + H T + + + N+VGG +++F G S D L F+ Sbjct: 170 EPY-----RPVHRTSATARAMENQVFAVVANRVGGSTHDVVFAGGSLAADPFGNLIFEAG 224 Query: 235 HFSEQNFMTEWHYDQ 249 + +E E +DQ Sbjct: 225 N-TESRHAVELDFDQ 238 >gi|50545469|ref|XP_500272.1| YALI0A20108p [Yarrowia lipolytica] gi|49646137|emb|CAG84210.1| YALI0A20108p [Yarrowia lipolytica] Length = 705 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 54/247 (21%), Positives = 94/247 (38%), Gaps = 34/247 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS-FI 63 + +A LN D GN + + EA RQG L + EL I+GY D + ++ Sbjct: 5 VTLATCNLNQWALDFEGNRDRILESIREAKRQGASLRVGPELEITGYGCLDHFLEGDLYL 64 Query: 64 QACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + L+ H + I+ +G P + N VI I+ +R K++L N Sbjct: 65 HSWEVYAEILE---HPDTSDIILDIGMPVMHKNVKYNCRVISYNREILLIRPKLSLANDG 121 Query: 122 EFHEKRTF---------------------------ISGYSNDPIVFRDIRLGILICEDIW 154 + E R F I + + + +D +G CE+++ Sbjct: 122 NYREMRYFTPWPKARYVEDYTLPRFVQNVCANESAIVPFGDCVLSTKDAVIGFETCEELF 181 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DE 213 + + G E + + S + KL R E++ + +Y NQ G D Sbjct: 182 TPQSPHIGMSLDGVEIFTNSSGSHHELRKLNTRMELIREATAKCGGIYLYANQRGCDGDR 241 Query: 214 LIFDGAS 220 L +DG + Sbjct: 242 LYYDGCA 248 >gi|262164810|ref|ZP_06032548.1| NAD synthetase [Vibrio mimicus VM223] gi|262027190|gb|EEY45857.1| NAD synthetase [Vibrio mimicus VM223] Length = 276 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 40/223 (17%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ----SLEDAAACAKALGCKY 350 +++G+SGG+DS C +A A+ + N Q Y++ + + +D A AL Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTSEYQFIAVRLPYGEQKDEAEAQLALSF-- 97 Query: 351 DVLPIHDL-------VNHFFSLMSQFLQ------EEPSGI--VAENIQSRIRGNILMALS 395 + P H + V+ + Q L +P+ I + N+++R R ++ Sbjct: 98 -IRPSHSVSVNIKAGVDGLHAASQQALANTGLVPNDPAKIDFIKGNVKARARMVAQYEIA 156 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 157 GYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLYGLNKRQVRLLAETLGA--------- 207 Query: 456 LTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 208 -----PAQLVHKTPTADLEELAPLKADETALNLTYEQIDDFLE 245 >gi|16764661|ref|NP_460276.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62179901|ref|YP_216318.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167552335|ref|ZP_02346088.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991871|ref|ZP_02572970.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168463292|ref|ZP_02697223.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194444327|ref|YP_002040569.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197261862|ref|ZP_03161936.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200390919|ref|ZP_03217530.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205352965|ref|YP_002226766.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|224584175|ref|YP_002637973.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|25090773|sp|Q8ZPU5|NADE_SALTY RecName: Full=NH(3)-dependent NAD(+) synthetase gi|75505786|sp|Q57PX4|NADE_SALCH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238690499|sp|B5RAZ4|NADE_SALG2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238693614|sp|B4T4K7|NADE_SALNS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766714|sp|C0Q6X4|NADE_SALPC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|16419828|gb|AAL20235.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62127534|gb|AAX65237.1| NAD synthetase, prefers NH3 over glutamine [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194402990|gb|ACF63212.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195634543|gb|EDX52895.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197240117|gb|EDY22737.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199603364|gb|EDZ01910.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205272746|emb|CAR37662.1| NAD+ synthase [glutamine-hydrolysing] [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322955|gb|EDZ10794.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329814|gb|EDZ16578.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|224468702|gb|ACN46532.1| NAD(+) synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246519|emb|CBG24329.1| 3-dependent NAD+ synthetase EC 6.3.1.5. Probable glutamine-dependent NAD+ synthetase EC 6.3.5.1 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993184|gb|ACY88069.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157847|emb|CBW17341.1| NH3-dependent NAD synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912296|dbj|BAJ36270.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223938|gb|EFX49001.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322714368|gb|EFZ05939.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129581|gb|ADX17011.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326628039|gb|EGE34382.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988198|gb|AEF07181.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 275 Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 37/216 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAIAELREETGDNALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + LG P + +K P+A+L + D+ SLP Sbjct: 196 -LAALG-----CPEHLYKKVPTADL---EDDRPSLP 222 >gi|227327035|ref|ZP_03831059.1| NAD synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 274 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 38/260 (14%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L++Y+ + F +++G+SGG DS L + A+ + +T Y++ + P ++ Sbjct: 30 LKNYLNAHPFVTSLVLGISGGQDSTLTGKLCQTAITELRNETGNSRYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMS------QFLQEEPSGIVAENIQSRIRGNIL 391 D A C A+ + P L + + + + E S V N ++R R Sbjct: 90 DEADCQDAIAF---IQPDRVLTVNIKPAIEASEATLRAIGVELSDFVKGNEKARERMKAQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ + +++ T + +E G+ T YGD NP+ L K R + Sbjct: 147 YSIAGMNAGLVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQGKALLR 197 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EY 510 LG P + K+P+A+L + D+ SLP L ++I + ++ Q E Sbjct: 198 ELG-----CPSHLYTKAPTADL---EEDRPSLPDEVALGVTYEKI----DDYLEGKQIEA 245 Query: 511 NDETVRYVEHLLYGSEYKRR 530 ND + +E+ +E+KRR Sbjct: 246 NDAAI--IENWYRKTEHKRR 263 >gi|115386794|ref|XP_001209938.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114190936|gb|EAU32636.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 324 Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 16/134 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE-------- 54 K +++A Q P D+ + KA +EA + G +++ F E+FI GYP Sbjct: 4 KPIRVAAIQAEPAWNDLEAGVDKAIALIQEAAQNGANVLGFPEVFIPGYPWSIWANSVID 63 Query: 55 -----DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNI 108 D F+ S ++ S +D +++ + G +V+G+ + Q + + +D +G+I Sbjct: 64 CAAFMDEYFRNS-LERESEQMDRIRAAVREAGIFVVLGYSERYQGSLYIAQSFIDPSGSI 122 Query: 109 IAVRDKINLPNYSE 122 + R KI P + E Sbjct: 123 VHHRRKIK-PTHVE 135 >gi|258591456|emb|CBE67757.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [NC10 bacterium 'Dutch sediment'] Length = 277 Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 11/214 (5%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS---SAIDTLK 74 D N+ +A + A ++G +I +E F + P + + F A S +T+ Sbjct: 20 DPGANLERAIELGKIAAQRGAKIICLSECFAWPWFPSE-IDPAQFATAESVPGPLSETVA 78 Query: 75 SDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG 132 + D +V F R N+ ++ DA G ++ K +LP + E+ F G Sbjct: 79 AFARDHQVAVVAPIFERGTDGAYYNTALVFDADGTLLGQYRKNHLPQLPNYQERFYFQPG 138 Query: 133 YSNDPIVFRDIRLGILICEDIWKN--SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEI 190 P+ R ++ + W N + L QGAE + + ++ + K + Sbjct: 139 NQGFPVF--HTRYAVIGVQMSWDNFFPEGSRLLALQGAEVICAPTSASIVASHAKWERAL 196 Query: 191 VTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 V G + + + VN+V G L F G SFC D Sbjct: 197 V-GSAVYNGVFVFRVNRVAGGGALPFYGKSFCVD 229 >gi|196229077|ref|ZP_03127943.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chthoniobacter flavus Ellin428] gi|196227358|gb|EDY21862.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chthoniobacter flavus Ellin428] Length = 284 Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 11/150 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA Q GD N+A+ ++A + + ++ F E F++GYP + ++ Sbjct: 1 MRIAHCQFESWCGDFDHNLARFEEGLKKAEEERVAVVTFPECFLTGYPDNEPEARRGAFA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A S + L T +VGF + NS + G+++ K + Y F+ Sbjct: 61 ADSEKMAKLLDITSRHEPLAIVGFNEIRGVDLYNSAAVAHRGHLLGTYSKCSA--YMAFY 118 Query: 125 EKRTFISGYSNDPIVF--RDIRLGILICED 152 ++ D VF + ++ G+LIC D Sbjct: 119 KQ-------GRDFPVFEHQGVKFGVLICAD 141 >gi|126664205|ref|ZP_01735197.1| probable nitrilase protein [Flavobacteria bacterium BAL38] gi|126623737|gb|EAZ94433.1| probable nitrilase protein [Flavobacteria bacterium BAL38] Length = 326 Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 17/145 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-- 59 KK K A Q +PV ++ + KA +EA+ G LI F E+FI+GYP + + Sbjct: 3 FKKFKAATVQTSPVFLNVEKTVDKAISFIKEASNNGAKLIAFPEVFIAGYPYWNWIMTPV 62 Query: 60 ----------KSFIQACSSAIDTLKSDTHDGGAGIVVGF-PRQDQEG-VLNSVVILDAGN 107 K+ + I L D IV+G R + G + N+ +I+D Sbjct: 63 QGSKWYEELYKNSVDVAGPEIKKLCLAAKDNDIHIVMGINERGNSYGEIYNTNLIIDNKG 122 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG 132 + + + +P ++ EK T+ SG Sbjct: 123 VFVGKHRKLVPTWA---EKLTWSSG 144 >gi|114764487|ref|ZP_01443712.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pelagibaca bermudensis HTCC2601] gi|114543054|gb|EAU46073.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Roseovarius sp. HTCC2601] Length = 255 Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 10/187 (5%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDT-LKSDTHDGGAGIVVGFPRQDQEGVLN 98 +++ ELF+ GY L + S Q +T L G G+ +G+ ++ E V N Sbjct: 36 MLVMPELFLPGYNQPALHDRLS--QPRGGDWETRLAGMARAAGCGLTIGWAEREGETVYN 93 Query: 99 SVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS 157 + A G ++ KI L E+ +F G + ++ +LIC D+ Sbjct: 94 AATAFGADGGVLGHYRKIQLFGP---MEQASFAPGDAFCTFELGGVKAALLICYDVEFAP 150 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 ++ + L +QG + A+ + +++ IV G+ + + + I+Y N G + L F Sbjct: 151 HV-RALAEQGVSLVLVPTANAVGFDHVQR--AIVPGRAAELGITIVYANYCGLEAGLSFG 207 Query: 218 GASFCFD 224 G S D Sbjct: 208 GLSLIAD 214 >gi|40890295|gb|AAR97492.1| nitrilase [uncultured organism] Length = 335 Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 68/168 (40%), Gaps = 20/168 (11%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K K A+ Q PV D+ G++ KA +EA G LI F E FI GYP Sbjct: 7 KFKAAVVQAAPVFLDLDGSVNKAINLIDEAAAAGAKLIAFPETFIPGYPWWIWLGSPAWA 66 Query: 58 FKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 + F+Q S D L+ +V+G +D + + +I G Sbjct: 67 LGRGFVQRYFDNSLQYDSPQADRLREAARRNSITVVLGLSERDGGSLYIAQWLIGPDGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN 156 IA R K+ P + E+ F G +D +V LG L + W+N Sbjct: 127 IAQRRKLR-PTHG---ERTVFGEGDGSD-LVVHQTELGRLGALNCWEN 169 >gi|298710242|emb|CBJ26317.1| NAD( ) synthase (glutamine-hydrolyzing) [Ectocarpus siliculosus] Length = 741 Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 86/248 (34%), Gaps = 35/248 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A L+ D GN+ + R+ +EA G L EL + GY ED + Sbjct: 12 VTVAACNLDQWALDFDGNLERVLRSIQEAKAMGARYRLGPELELCGYGCEDHFLEHDTFL 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C ++ L S G +G P Q N V I+A+R K++L + + Sbjct: 72 HCDQSLAALLSCDATDGILCDIGMPVQHLGVRYNCRVFCLNRKILAIRPKLHLADDGNYR 131 Query: 125 EKRTFISG------------------YSNDPIVFRDIRLGIL-------ICEDIWKNSNI 159 E R F + D + F + L CE++W + Sbjct: 132 ETRWFTTWKRRNETEDHTLCRGLAEVTGQDKVPFGQTAVSALDALVAGETCEELWTPDS- 190 Query: 160 CKHLKKQGAEFLFSLNASPYYH--NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 H+ + A N S +H KL R + + +Y NQ G D Sbjct: 191 -PHIGQALAGVDIIGNGSGSHHQLRKLDTRLNYMISATAKCGGVYVYSNQRG------CD 243 Query: 218 GASFCFDG 225 G +DG Sbjct: 244 GGRLYYDG 251 >gi|40890253|gb|AAR97471.1| nitrilase [uncultured organism] Length = 336 Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 30/174 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS--- 61 +K+A AQ+ PV D I KA EA + G L++F E F+ GYP D V+ + Sbjct: 6 VKVAAAQVTPVFMDRKATIVKACDTIAEAGKNGARLVVFPETFVPGYP--DWVWTATAGT 63 Query: 62 ---------------FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILD 104 + S A D L G +V+G G + N+++ +D Sbjct: 64 HRDIHQAMYAELLDQAVSIPSPATDALCRAAKKAGVYVVIGVNELSGPGGSLYNTLIYID 123 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKN 156 I R + +P E+ + G + + RLG LIC W+N Sbjct: 124 DEGEIMGRHRKLVPT---MGERLVWAPGDGSTLEAYETSIGRLGGLIC---WEN 171 >gi|116620675|ref|YP_822831.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Candidatus Solibacter usitatus Ellin6076] gi|116223837|gb|ABJ82546.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Candidatus Solibacter usitatus Ellin6076] Length = 279 Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 37/234 (15%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGG 81 N+AKA +A +G ++ ELF S Y F ++ A +T+ T + Sbjct: 10 NLAKAEWRIRDAAGKGAQIVCVQELFRSQY------FCQTENIATFDLAETIPGPTTESF 63 Query: 82 AG-------IVVG--FPRQDQEGVLNSVVILDAGN-IIAVRDKINLPNYSEFHEKRTFIS 131 ++VG F R+ N+ VI+DAG ++ + K+++P+ F+EK F Sbjct: 64 TRLARELDVVIVGSIFERRMAGVFHNTAVIIDAGGELLGLYRKMHIPDDPRFYEKYYFTP 123 Query: 132 GYSNDPIVFRDI-----RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL-- 184 G + FR R+ LIC D W + GA+ LF A ++H+ Sbjct: 124 G----DLGFRCFDTKYARIAPLICWDQWFPEG-ARMAALGGAQILFYPTAIGFHHSDAAE 178 Query: 185 --KKRHEIVTGQISHVHLPIIY---VNQVGGQ----DELIFDGASFCFDGQQQL 229 + + T Q SH +Y VN+VG + + L F G SF D Q ++ Sbjct: 179 AGTQHNAWETVQRSHAIANGVYVAAVNRVGHEGPEGEGLQFWGGSFLSDPQGRM 232 >gi|295705537|ref|YP_003598612.1| hypothetical protein BMD_3422 [Bacillus megaterium DSM 319] gi|294803196|gb|ADF40262.1| conserved hypothetical protein [Bacillus megaterium DSM 319] Length = 269 Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 35/68 (51%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 + V++ SGG+DS +AV+ LG ENV + + LE+A A+ +G ++ Sbjct: 15 DMESVVVAFSGGVDSTFLLKVAVETLGNENVIAVTADSETYPSSELEEAKVLARQIGVRH 74 Query: 351 DVLPIHDL 358 ++ +L Sbjct: 75 QIIETSEL 82 >gi|40890067|gb|AAR97378.1| nitrilase [uncultured organism] Length = 330 Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 22/206 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------PE 54 ++ +K A QL+PV+ G + K R E +G++ + F E + YP P Sbjct: 1 MRVVKAAAVQLSPVLYSREGTVEKVVRKIHELAEEGVEFVTFPETVVPYYPYFSFVQTPL 60 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHDGG-----AGIVV--GFPRQDQEGVLNSVVILDA-G 106 +F +++ A+ + T G AG+VV G +D + N+ ++ DA G Sbjct: 61 QQIFGTEYLRLLDQAVTVPSAATDAIGEAARFAGVVVSIGVNERDGGTLYNTQLLFDADG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH--LK 164 ++I R KI +Y + SG + + R+G L C W+++N L Sbjct: 121 SLIQRRRKITPTHYERMIWGQGDGSGLR--AVDSKAGRIGQLAC---WEHNNPLARYALI 175 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEI 190 G + ++ + + K+ EI Sbjct: 176 ADGEQIHSAMYPGSMFGDSFAKKTEI 201 >gi|294500187|ref|YP_003563887.1| hypothetical protein BMQ_3431 [Bacillus megaterium QM B1551] gi|294350124|gb|ADE70453.1| conserved hypothetical protein [Bacillus megaterium QM B1551] Length = 269 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 35/68 (51%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 + V++ SGG+DS +AV+ LG ENV + + LE+A A+ +G ++ Sbjct: 15 DMESVVVAFSGGVDSTFLLKVAVETLGNENVIAVTADSETYPSSELEEAKVLARQIGVRH 74 Query: 351 DVLPIHDL 358 ++ +L Sbjct: 75 QIIETSEL 82 >gi|262172949|ref|ZP_06040626.1| NAD synthetase [Vibrio mimicus MB-451] gi|261890307|gb|EEY36294.1| NAD synthetase [Vibrio mimicus MB-451] Length = 276 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 40/223 (17%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ----SLEDAAACAKALGCKY 350 +++G+SGG+DS C +A A+ + N Q Y++ + + +D A AL Sbjct: 40 LVLGISGGVDSTTCGRLAQLAVEELNQQHNTSEYQFIAVRLPYGEQKDEAEAQLALSF-- 97 Query: 351 DVLPIHDL-------VNHFFSLMSQFLQ------EEPSGI--VAENIQSRIRGNILMALS 395 + P H + V+ + Q L +P+ I + N+++R R ++ Sbjct: 98 -IRPSHSVSVNIKAGVDGLHAASQQALANTGLVPSDPAKIDFIKGNVKARARMVAQYEIA 156 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 + ++L T + +E G+ T +GD + PL L K QV LA + Sbjct: 157 GYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLYGLNKRQVRLLAETLGA--------- 207 Query: 456 LTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K+P+A EL P + D+ +L Y +DD ++ Sbjct: 208 -----PAQLVHKTPTADLEELAPLKADETALNLTYEQIDDFLE 245 >gi|227111535|ref|ZP_03825191.1| NAD synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 274 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 38/260 (14%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L++Y+ + F +++G+SGG DS L + A+ + +T Y++ + P ++ Sbjct: 30 LKNYLNAHPFVTSLVLGISGGQDSTLTGKLCQTAITELRNETGNSRYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMS------QFLQEEPSGIVAENIQSRIRGNIL 391 D A C A+ + P L + + + + E S V N ++R R Sbjct: 90 DEADCQDAIAF---IQPDRVLTVNIKPAIEASEATLRAIGVELSDFVKGNEKARERMKAQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ + +++ T + +E G+ T YGD NP+ L K R + Sbjct: 147 YSIAGMNAGLVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQGKALLR 197 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EY 510 LG P + K+P+A+L + D+ SLP L ++I + ++ Q E Sbjct: 198 ELG-----CPSHLYTKAPTADL---EEDRPSLPDEVALGVTYEKI----DDYLEGKQIEA 245 Query: 511 NDETVRYVEHLLYGSEYKRR 530 ND + +E+ +E+KRR Sbjct: 246 NDAAI--IENWYRKTEHKRR 263 >gi|168238979|ref|ZP_02664037.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734313|ref|YP_002114329.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|198245485|ref|YP_002215815.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204927470|ref|ZP_03218671.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238690316|sp|B5FJD0|NADE_SALDC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238693693|sp|B4TUC9|NADE_SALSV RecName: Full=NH(3)-dependent NAD(+) synthetase gi|194709815|gb|ACF89036.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288263|gb|EDY27648.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940001|gb|ACH77334.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204322812|gb|EDZ08008.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|326623562|gb|EGE29907.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 275 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 37/216 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAIAELREETGDNALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + LG P + +K P+A+L + D+ SLP Sbjct: 196 -LAALG-----CPEHLYKKVPTADL---EDDRPSLP 222 >gi|56413704|ref|YP_150779.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362627|ref|YP_002142264.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81677887|sp|Q5PHB6|NADE_SALPA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238689909|sp|B5BA65|NADE_SALPK RecName: Full=NH(3)-dependent NAD(+) synthetase gi|56127961|gb|AAV77467.1| NH3-dependent NAD synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094104|emb|CAR59604.1| NH3-dependent NAD synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 275 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 37/216 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAIAELREETGDNALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + LG P + +K P+A+L + D+ SLP Sbjct: 196 -LAALG-----CPEHLYKKVPTADL---EDDRPSLP 222 >gi|225871080|ref|YP_002747027.1| NH(3)-dependent NAD(+) synthetase [Streptococcus equi subsp. equi 4047] gi|254766716|sp|C0M795|NADE_STRE4 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|225700484|emb|CAW94917.1| NH(3)-dependent NAD(+) synthetase [Streptococcus equi subsp. equi 4047] Length = 274 Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 42/232 (18%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y+ K+ F K ++G+SGG DS+L +A A+ G E Q + LPY + Sbjct: 30 LKAYLLKHPFLKTYVLGISGGQDSSLAGKLAQMAIEELRAETGDEQYQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRI 386 D A KAL + P L VN ++ Q E +G+ NI++R Sbjct: 90 -----DEADAQKALAF---IQPDQALTVNIKEAVDGQLRALEAAGLEISDFNKGNIKARQ 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R A++ + ++ T + +E G+ T +GD PL L K Q L + Sbjct: 142 RMISQYAIAGQTAGAVIGTDHAAENVTGFFTKFGDGGADILPLFRLTKRQGKALLKVLKA 201 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 PS+ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 202 D--------------PSLYEKVPTADLEDKKPGLADEVALGVTYQEIDDYLE 239 >gi|86145124|ref|ZP_01063455.1| carbon-nitrogen hydrolase [Vibrio sp. MED222] gi|85836701|gb|EAQ54821.1| carbon-nitrogen hydrolase [Vibrio sp. MED222] Length = 297 Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 13/159 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 +L + + + QL + NI++ E G D+ L ELF +GY D Sbjct: 34 ILNSVSVTLVQLEVEYKNKQMNISRVSELLEAETAVG-DITLLPELFSTGYIFND---AA 89 Query: 61 SFIQAC-----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 + C S ID+L + IV G +D NSVV++D + R K Sbjct: 90 EIHELCEDFNNSPTIDSLTALATKHQTLIVAGVAEEDNGQYYNSVVVVDGSGL---RHKY 146 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 + ++F +K F G ++ ++ G+ IC DIW Sbjct: 147 RKVSQTKF-DKEYFSRGNELLTFEYKGLKFGVAICFDIW 184 >gi|70732957|ref|YP_262729.1| carbon-nitrogen family hydrolase [Pseudomonas fluorescens Pf-5] gi|68347256|gb|AAY94862.1| hydrolase, carbon-nitrogen family [Pseudomonas fluorescens Pf-5] Length = 264 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 35/231 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q P D+AGN+ + + EA DL++ E+F+SGY + Sbjct: 1 MRVALYQCPPRPLDVAGNLQRLHQVAMEAT--DADLLVLPEMFLSGYN-----IGLEAVG 53 Query: 65 ACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLP 118 A + A D + + G I+ G+P + +G + N+V ++DA L Sbjct: 54 ALAEAQDGPSAQRIAAIAQAAGTAILYGYPERSVDGQIYNAVQLIDA-------QGQRLC 106 Query: 119 NYSEFH-----EKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLF 172 NY + H + F +G + P+V D +LG LIC DI N + L GAE + Sbjct: 107 NYRKTHLFGDLDHSMFSAGEDDFPLVELDGWKLGFLICYDIEFPEN-ARRLALAGAELIL 165 Query: 173 --SLNASPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + N PY + + R Q + Y N G ++++ + G S Sbjct: 166 VPTANMIPYDFVADVTIRARAFENQCY-----VAYANYCGHEEQIRYCGQS 211 >gi|307706026|ref|ZP_07642849.1| NH3-dependent NAD+ synthetase [Streptococcus mitis SK564] gi|307620445|gb|EFN99558.1| NH3-dependent NAD+ synthetase [Streptococcus mitis SK564] Length = 274 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDISLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARCRMIAQYALAGVHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII- 493 L L E+ P++ EK P+A+L +P D+ +L Y +DD + Sbjct: 195 L---------------LQELGADPALYEKIPTADLEEDKPGLADEVALGVTYEEIDDYLE 239 Query: 494 -KRIVENEESFINN 506 K I ++ I N Sbjct: 240 GKTISPEAQATIEN 253 >gi|329954872|ref|ZP_08295889.1| hydrolase, carbon-nitrogen family [Bacteroides clarus YIT 12056] gi|328526976|gb|EGF53987.1| hydrolase, carbon-nitrogen family [Bacteroides clarus YIT 12056] Length = 294 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 49/293 (16%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+K+ I Q V D+ N+ ++ E G L++ EL S Y Sbjct: 1 MRKIKVGIIQ-QANVADMRINLMNLAKSIEACATHGAQLVVLQELHNSLY---------- 49 Query: 62 FIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-GN 107 F Q ++ + L G +V + G+ N+ V+ + G+ Sbjct: 50 FCQTENTQLFDLAEPIPGPSTGFYSELAAANNIVLVTSLFEKRAPGLYHNTAVVFERDGS 109 Query: 108 IIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I K+++P+ ++EK F G +PI +LG+L+C D W + + + Sbjct: 110 IAGKYRKMHIPDDPAYYEKFYFTPGDLGFEPIQTSLGKLGVLVCWDQWY-PEAARLMALK 168 Query: 167 GAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE----- 213 GAE L A + + K ++ + + Q H LP+I VN+VG + + Sbjct: 169 GAELLIYPTAIGWESSDTDDEKARQLNAWIISQRGHAVANGLPVISVNRVGHEPDPSMQT 228 Query: 214 --LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 + F G SF Q + Q + +N + E D + S+ W ++ D Sbjct: 229 NGIRFWGNSFVVGPQGEFLVQAGNEQPENIVVE--VDMERSENVRRWWPFLRD 279 >gi|161614286|ref|YP_001588251.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168244420|ref|ZP_02669352.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263872|ref|ZP_02685845.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168821955|ref|ZP_02833955.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194448413|ref|YP_002045317.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|238910872|ref|ZP_04654709.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|189083405|sp|A9N269|NADE_SALPB RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238690645|sp|B4TGE8|NADE_SALHS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|161363650|gb|ABX67418.1| hypothetical protein SPAB_02031 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194406717|gb|ACF66936.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205336706|gb|EDZ23470.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341596|gb|EDZ28360.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347524|gb|EDZ34155.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 275 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 50/266 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAIAELREETGDNALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + LG P + +K P+A+L RP D+ +L Y +DD ++ Sbjct: 196 -LAALG-----CPEHLYKKVPTADLEDDRPSLPDEAALGVTYDNIDDYLE---------- 239 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKRR 530 + + + +E +E+KRR Sbjct: 240 --GKTLDSAIAKTIEGWYVKTEHKRR 263 >gi|21224721|ref|NP_630500.1| hypothetical protein SCO6414 [Streptomyces coelicolor A3(2)] gi|256784123|ref|ZP_05522554.1| hypothetical protein SlivT_06513 [Streptomyces lividans TK24] gi|289768003|ref|ZP_06527381.1| hydrolase [Streptomyces lividans TK24] gi|3127835|emb|CAA18901.1| hypothetical protein [Streptomyces coelicolor A3(2)] gi|289698202|gb|EFD65631.1| hydrolase [Streptomyces lividans TK24] Length = 280 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 12/185 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M + ++ A+ Q GD I +A +A QG ++ F ELF Y PE Sbjct: 1 MSRVIRAALFQ-TAWTGDKESMIQVHEQAVRDAAAQGAQVMCFQELFYGPYFCQVQDPEF 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRD 113 + + ++ + + G +V+ ++Q GVL N+ ++DA G+ + Sbjct: 60 YAYAERVPDG--PIVERFQRLAREHGIVLVLPMYEEEQPGVLYNTAAVIDADGSYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G S P+ + ++G+ IC D + L +GAE +F Sbjct: 118 KTHIPQVRGFWEKFYFRPGNSGWPVFDTAVGKVGVYICYDR-HFPEGWRALGLEGAEIVF 176 Query: 173 SLNAS 177 + +A+ Sbjct: 177 NPSAT 181 >gi|311694965|gb|ADP97838.1| carbon-nitrogen hydrolase family protein [marine bacterium HP15] Length = 307 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 33/267 (12%) Query: 2 LKKLKIAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 L+K +I +A + D A ++A + EA G +L++ EL + Y E V Sbjct: 5 LRKSQINVAVIQQACSSDKAASLATTEKLVREAVASGANLVILQELHATLYFCQTEETSV 64 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDK 114 F+ + SD ++VG F R+ N+ V+ + G++ + K Sbjct: 65 FE--LAEPIPGPTSKRLSDLARELGIVLVGSIFERRMNGVYHNTAVVFEKDGSLAGLYRK 122 Query: 115 INLPNYSEFHEKRTFISGYS--ND------PIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 +++P+ F+EK F G + ND PI RLG+L+C D W + + Sbjct: 123 MHIPDDPGFYEKFYFTPGDAQFNDGRSGFTPIDTSVGRLGVLVCWDQWY-PEAARLMALA 181 Query: 167 GAEFLFSLNASPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQ------- 211 GAE L A + + ++ VT Q H +LP++ N+VG + Sbjct: 182 GAEILIYPTAIGWDVTDDPDEQARQLDAWVTVQRGHAVANNLPVVAPNRVGTEPDPSGHS 241 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSE 238 D + F G SF Q +L + SE Sbjct: 242 DGIRFWGNSFICGPQGELLARGDDSSE 268 >gi|303287696|ref|XP_003063137.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455773|gb|EEH53076.1| predicted protein [Micromonas pusilla CCMP1545] Length = 274 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 3/52 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAK--ARRAREEANRQGMDLILFTELFISGY 51 + ++K+A AQLNP GD+AGN+ + A +R A+ G+D++L E+ ++GY Sbjct: 1 MPRVKVACAQLNPTRGDVAGNMRRVDAMTSRLTAD-DGVDVLLLPEMALTGY 51 >gi|261343366|ref|ZP_05971011.1| hydrolase, carbon-nitrogen family [Providencia rustigianii DSM 4541] gi|282568504|gb|EFB74039.1| hydrolase, carbon-nitrogen family [Providencia rustigianii DSM 4541] Length = 277 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 23/228 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++K+A+AQ + +G+ N+ + + E+A QG LI F EL +GY DL+ K + Sbjct: 5 RVKVALAQFDSELGNKQRNLQRMAQLCEQAAAQGAKLICFPELATTGYRG-DLLSNKLWD 63 Query: 64 QACSSAIDT------LKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAG--NIIAVRD 113 + S +T L S + IV GF + V NSV + + G I V Sbjct: 64 LSDSEGSETYCLFSELASRLN---LSIVAGFAERGSYLGEVYNSVGLWNPGCKTISGVFR 120 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K++ EK+ F +G S P+ I ++GI+IC D+ + + L QGAE L Sbjct: 121 KVHAFGI----EKQWFKNGDSF-PVFDTPIGKVGIMICYDM-GFPEVARILTLQGAELLI 174 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + +A + + + HL + VN+ G +++L G S Sbjct: 175 APSAWCVQDRDMWDINTACRALENGTHL--LAVNRWGSEEDLHLFGGS 220 >gi|104782606|ref|YP_609104.1| carbon-nitrogen hydrolase [Pseudomonas entomophila L48] gi|95111593|emb|CAK16314.1| putative carbon-nitrogen hydrolase [Pseudomonas entomophila L48] Length = 271 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 18/244 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + Q GD A N+ A + D++LF E ++G+ ED V S + Sbjct: 1 MKIEVVQTTTRDGDTAHNLRGILEALAQCAPD-TDILLFPESHLTGFLAEDDVGMLS--E 57 Query: 65 ACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A A+ + +V+G D N+ + + I+ K +L Sbjct: 58 AVDGDAVQAVVEAARRHNVAVVLGLYENDGGTFYNTTLFIAPEGILLTYRKTHL----WL 113 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN--ASPYYH 181 E + G + +R +RLG+LIC D + + LK GA+ + + A P H Sbjct: 114 PEHGIVVPGDRFATVEWRGVRLGLLICYD-SEFPETARALKTLGAQLMLITDGLAEPEDH 172 Query: 182 -NKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +++ + Q+ V N+VG G D +F GAS D Q+ F+ + Sbjct: 173 VHRVSVMARAMENQVFAV-----VANRVGDGPDGCVFVGASLAVDPYGQILFEAGRGESR 227 Query: 240 NFMT 243 + +T Sbjct: 228 HSVT 231 >gi|320086208|emb|CBY95982.1| NAD synthetase, prefers NH3 over glutamine [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 275 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 37/216 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAIAELREETGDNALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + LG P + +K P+A+L + D+ SLP Sbjct: 196 -LAALG-----CPEHLYKKVPTADL---EDDRPSLP 222 >gi|157146011|ref|YP_001453330.1| NAD synthetase [Citrobacter koseri ATCC BAA-895] gi|189030355|sp|A8AHD1|NADE_CITK8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|157083216|gb|ABV12894.1| hypothetical protein CKO_01765 [Citrobacter koseri ATCC BAA-895] Length = 276 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 38/230 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L + A+ G + +Q + LP+ + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLTGKLCQTAITELREETGNDALQFIAVRLPFGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTNGVVVGTDHAAEAVTGFFTKYGDGGTDINPLFRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P + +K+P+A+L RP D+ +L Y +DD ++ Sbjct: 196 -LAALG-----CPEHLYKKAPTADLEDDRPSLPDEAALGVTYDNIDDYLE 239 >gi|60280369|gb|AAX18182.1| nitrilase [Nocardia sp. C-14-1] Length = 381 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 25/185 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP----PEDLVFKK 60 +K+A Q PV+ D I KA EEA++ G + I F E++I GYP D+ + Sbjct: 1 MKVATVQAEPVILDADATIDKAIGYIEEASKNGAEFIAFPEVWIPGYPYWAWIGDVKWAV 60 Query: 61 S-FIQACSSAIDTLKSD--------THDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIA 110 S FI TL D +VVG+ +D S V +D G+I+A Sbjct: 61 SEFIPKYHENSLTLGDDRMRRLQLAARQHNIAMVVGYSEKDGASRYLSQVFIDQNGDIVA 120 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 R K+ H +RT + + D G + + W +H + Sbjct: 121 NRRKL-----KPTHVERTIYGEGNGTDFLTHDFGFGRVGGLNCW------EHFQPLSKYM 169 Query: 171 LFSLN 175 ++SLN Sbjct: 170 MYSLN 174 >gi|33240495|ref|NP_875437.1| putative nitrilase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238023|gb|AAQ00090.1| Nitrilase-like protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 273 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 10/164 (6%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 DI N + A E A+R+G +L+ E F G + L S + CS + T+ Sbjct: 16 DIEANFSLAEEQIELASRRGAELVGLPENFAFLGNDQQRLDISASLAEQCSQFLVTMARR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P D + LN ++ G ++ DKI +LP+ +++ E T I Sbjct: 76 YQIFLLGGGFPVPAGDGQRTLNRAELVGRDGQLLGRYDKIHLFDVDLPDGNKYRESETII 135 Query: 131 SGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG ++ ++GI IC D+ + + +HL +GAE L Sbjct: 136 SGKKLPSVINLPGLCKVGISICYDV-RFPELYRHLVNEGAELLM 178 >gi|325295428|ref|YP_004281942.1| tRNA-specific 2-thiouridylase mnmA [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065876|gb|ADY73883.1| tRNA-specific 2-thiouridylase mnmA [Desulfurobacterium thermolithotrophum DSM 11699] Length = 350 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 13/124 (10%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KVI+G SGGIDS A + L ++ + + +K S E A A LG V+ Sbjct: 3 KVILGFSGGIDSFYTAYL----LKEQRFKVFPVYFKVLPDISTEKAEESASILGLGLTVI 58 Query: 354 PIHD-----LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + D ++NHF + L P I ++I+ + L LS KA ++T + Sbjct: 59 DLSDEFRKKVINHFIEYYKKGLTPNPCAICNKDIKLK----YLYELSKELKADFISTGHY 114 Query: 409 SEIS 412 +++S Sbjct: 115 AKVS 118 >gi|282864503|ref|ZP_06273558.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces sp. ACTE] gi|282560442|gb|EFB65989.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces sp. ACTE] Length = 280 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 12/185 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y PE Sbjct: 1 MSDVVRAALVQAT-WTGDTESMIAKHEEHAREAARQGARIIGFQEVFNAPYFCQVQEPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRD 113 + ++ + + ++ + G IVV +Q G N+ ++DA G+ + Sbjct: 60 YRWAEAVPDGPT--VRRMRELARETGMVIVVPVFELEQSGFYYNTAAVIDADGSYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G + P+ + ++G+ IC D + L GA+ ++ Sbjct: 118 KHHIPQVKGFWEKYYFKPGNAGWPVFDTAVGKVGVYICYDR-HFPEGWRQLGLNGAQLVY 176 Query: 173 SLNAS 177 + +A+ Sbjct: 177 NPSAT 181 >gi|332362971|gb|EGJ40760.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK49] Length = 274 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDPEEEIRKSVDFLKAYLRKHPFLKTYVLGISGGQDSTLAGRLAQLAVEEMRAETRDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A K DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-IKPDVSLTVN--IKESADAMTKAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|197249025|ref|YP_002146726.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238690056|sp|B5F7I4|NADE_SALA4 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|197212728|gb|ACH50125.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 275 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 50/266 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPY-KYT 331 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAIAELREETGDNALQFIAVRLPYGAQA 89 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFI 504 + LG P + +K P+A+L RP D+ +L Y +DD ++ Sbjct: 196 -LAALG-----CPEHLYKKVPTADLEDDRPSLPDEAALGVTYDNIDDYLE---------- 239 Query: 505 NNDQEYNDETVRYVEHLLYGSEYKRR 530 + + + +E +E+KRR Sbjct: 240 --GKTLDSAIAKTIEGWYVKTEHKRR 263 >gi|225166174|ref|ZP_03727893.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Opitutaceae bacterium TAV2] gi|224799586|gb|EEG18096.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Opitutaceae bacterium TAV2] Length = 292 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 21/224 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKS 75 D N+ K E+A R+G +I ELF S Y ED + + Sbjct: 14 DPKANLKKTLALTEQAARKGAKIICTQELFRSQYFCQSEDHAHFALAEPIPGPSTQAFQK 73 Query: 76 DTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGY 133 IV + G+ N+ VI+DA G+++ + K+++P+ F+EK F G Sbjct: 74 IAKKHQVVIVASLFEKRASGLYHNTAVIIDADGSLLGIYRKMHIPDDPLFYEKFYFTPGD 133 Query: 134 SN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK-----LKKR 187 + R ++G+LIC D W + QGAE LF A ++ ++ + + Sbjct: 134 TGFRAWQTRHGKIGVLICWDQWYPEG-ARLTALQGAEILFYPTAIGWHPSEKSEYGVNQH 192 Query: 188 HEIVTGQISHVHLPIIYV---NQVG-------GQDELIFDGASF 221 T Q SH YV N++G G D + F G SF Sbjct: 193 GAWETIQRSHAVANGCYVASINRIGHEKIAGVGGDGIEFWGQSF 236 >gi|19746572|ref|NP_607708.1| NAD synthetase [Streptococcus pyogenes MGAS8232] gi|25090743|sp|Q8NZY8|NADE_STRP8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|19748786|gb|AAL98207.1| putative NAD+ synthase [Streptococcus pyogenes MGAS8232] Length = 274 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKTYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETGDQAYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL ++P L +N ++ Q + +GI NI++R R Sbjct: 90 DEADAQKALAF---IMPDQTLTINIKAAVDGQVAALQEAGIEISDFNKGNIKARQRMISQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 198 VLGA-----DAALYEKVPTADLEDQKPGLADEVALGVTYQDIDDYLE 239 >gi|295394818|ref|ZP_06805033.1| NAD+ synthetase [Brevibacterium mcbrellneri ATCC 49030] gi|294972414|gb|EFG48274.1| NAD+ synthetase [Brevibacterium mcbrellneri ATCC 49030] Length = 275 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 37/243 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQT----IMLPYKYTSPQS 335 L DY ++G+SGG DS L + AV+ L + + + LPY+ Q Sbjct: 31 LVDYCLTTGTRGFVLGISGGQDSTLAGKLCQLAVEELRRRDYDATFVAMRLPYRLQ--QD 88 Query: 336 LEDAAACAKALG----CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 +DA + +++ D V+ F+ + E S N+++R+R Sbjct: 89 EQDAQDALDFIEPDRVVTFNIGEATDEVSKEFTTA---MGHETSDFNRGNVKARMRMIAQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ +++ T + +E G+ T +GD PL L K Q ++ Sbjct: 146 YAVAGDLGLLVVGTDHAAEAVTGFYTKFGDGGADVTPLAGLTKRQGREM----------- 194 Query: 452 GLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK-RIVENEESFIN 505 L E+ P + K P+A+L +P QTD+ +L Y +DD ++ + V ++ +F Sbjct: 195 ----LQELDCPEHLYLKVPTADLLDDQPGQTDESALGLTYENIDDYLEGKPVSDDTAFTI 250 Query: 506 NDQ 508 D+ Sbjct: 251 EDK 253 >gi|110833907|ref|YP_692766.1| carbon-nitrogen hydrolase family protein [Alcanivorax borkumensis SK2] gi|110647018|emb|CAL16494.1| carbon-nitrogen hydrolase family protein [Alcanivorax borkumensis SK2] Length = 297 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 36/283 (12%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQA 65 AI Q N D+ N+ + +A QG +L+L EL S Y ED Sbjct: 5 AIQQTN--TADLQANLDHSLSLVRDAAAQGAELVLLQELHRSLYFCQTEDTSVFDLAETI 62 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEF 123 + +TL + G IV + G+ N+ V+L+ G++ + K+++P+ F Sbjct: 63 PGPSTETLGELAKELGIVIVGSLFEKRATGLYHNTAVVLEKDGSLAGIYRKMHIPDDPGF 122 Query: 124 HEKRTFISGYSN--------DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +EK F G +N PI +LG+L+C D W + + GA+ L Sbjct: 123 YEKFYFTPGDANCNDGRSGFTPIDTSVGKLGLLVCWDQWY-PEAARLMALAGADLLLYPT 181 Query: 176 ASPYYHNKLKKRHE-----IVTGQISHV---HLPIIYVNQVGGQ----DE--LIFDGASF 221 A + + + +T Q +H LP++ N+ G + DE + F G SF Sbjct: 182 AIGWDRTDEQDEQQRQLDAWITIQRAHGIANGLPVLVANRCGFEQSPADESGIQFWGNSF 241 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 Q + Q +EQ + + D Q S+ W Y+ D Sbjct: 242 ICGPQGEFLAQANSNNEQVLLAD--VDLQRSESVRRIWPYLRD 282 >gi|240849577|ref|NP_001155579.1| omega-amidase NIT2-like [Acyrthosiphon pisum] gi|239789076|dbj|BAH71185.1| ACYPI004672 [Acyrthosiphon pisum] Length = 284 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 22/181 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK--SF 62 ++ A+ QL+ V D + NIA A + + A G L + E F + Y ++ +F+K Sbjct: 9 IRAAVLQLS-VTADKSANIAIAVKRIQLAKSNGCTLAVLPECFTTPY--DNALFRKYAEI 65 Query: 63 I---QACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKI- 115 I + C + KS+ VVG P V N+ + D GN+IA K+ Sbjct: 66 IPDGETCKALSQAAKSNKM-----YVVGGSIPELCDNKVYNTCTVWDPNGNLIAKHRKVH 120 Query: 116 ----NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 N+P + F E G + + +++G+ IC D+ + S + +KQG + L Sbjct: 121 LFDVNIPGSTCFKESNAMSPGNTLNTFQMGTLKVGLGICHDM-RFSEMAALYQKQGCDLL 179 Query: 172 F 172 Sbjct: 180 I 180 >gi|70733018|ref|YP_262791.1| carbon-nitrogen family hydrolase [Pseudomonas fluorescens Pf-5] gi|68347317|gb|AAY94923.1| hydrolase, carbon-nitrogen family [Pseudomonas fluorescens Pf-5] Length = 275 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 13/155 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED----LVFKK 60 LK+A Q+ P +GD+ N A A +A +G +++ EL SGY D L + Sbjct: 7 LKVACQQVAPRIGDLKYNRALGAEAIRQAAARGAQVVVLPELVQSGYVFSDRNEALALSE 66 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGF-PRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S S TL + IV GF R DQE V NS +++ + + K +L + Sbjct: 67 SLDGPTLSLWKTLAEELQ---VVIVGGFCERLDQERVANSAALVEPEGRLTLYRKAHLWD 123 Query: 120 YSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDI 153 E F G P+V R + ++IC D+ Sbjct: 124 ----RENLIFTPGDEPPPVVATRFGPIAMMICYDL 154 >gi|251772718|gb|EES53280.1| putative carbon-nitrogen hydrolase [Leptospirillum ferrodiazotrophum] Length = 279 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 13/134 (9%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEG 95 LI+ ELF +GY V K + + L S + GA +V G P + +G Sbjct: 41 LIVLPELFATGY---QFVSKDEVVSLAEPEDGPTFEFLSSLSRKTGAVVVGGLPIRRADG 97 Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIW 154 + N +++ ++A DK++L + E+ F+ G S P+V +G++IC D W Sbjct: 98 ISNGALVVWGERLLASYDKVHLFD----RERDFFVEGKSPLPVVTTPFGPMGVMICFD-W 152 Query: 155 KNSNICKHLKKQGA 168 + L GA Sbjct: 153 LFPEALRSLALSGA 166 >gi|324991991|gb|EGC23913.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK405] Length = 274 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 36/244 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ- 322 P+ + E + V L+ Y++K+ F K ++G+SGG DS L A +AV+ + KE Sbjct: 15 PIIDPEEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRKETGDD 74 Query: 323 -----TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + LPY + D A KAL + + + M++ ++ + + Sbjct: 75 SYHFIAVRLPYGVQA-----DEADAQKALAFIQPDVSLTVNIKESADAMTKAVEATGAKV 129 Query: 378 V---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 NI++R R AL+ ++ T + +E + T +GD PL L K Sbjct: 130 SDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLNK 189 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 Q QL + LG P++ EK P+A+L +P D+ +L Y +D Sbjct: 190 RQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEIALGVTYNEID 235 Query: 491 DIIK 494 D ++ Sbjct: 236 DYLE 239 >gi|297617926|ref|YP_003703085.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Syntrophothermus lipocalidus DSM 12680] gi|297145763|gb|ADI02520.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Syntrophothermus lipocalidus DSM 12680] Length = 277 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 18/204 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L+I I Q+ VV D N+ KAR +A+RQG +L++ E+F Y E + F Sbjct: 1 MKANLRIGICQMM-VVDDKESNLRKAREMIRKASRQGCNLVVLPEMFNCPY--ESMAFPS 57 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEG-VLNSVVILDA-GNIIAVRDKIN 116 + L S T +VG P D G + NS + G + K++ Sbjct: 58 YAEPIPNGETSLLLSRTARDEHIYLVGGSIPEIDSGGRIFNSCPVFGPDGQFLGCHRKVH 117 Query: 117 LPNYS-----EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 L + F E T +G + I LGILIC DI + + + L G + L Sbjct: 118 LFDVDLESGLSFRESDTLKAGNNLTIIPTPAATLGILICYDI-RFPELSRLLSLSGVQVL 176 Query: 172 -----FSLNASPYYHNKLKKRHEI 190 F+ P + L + I Sbjct: 177 VVPAAFNTTTGPAHWEILLRTRAI 200 >gi|37681887|gb|AAQ97821.1| Nit protein 2 [Danio rerio] Length = 277 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 19/207 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K ++A+ QL+ V A N+ +A+ EA QG +++ E F S P F K Sbjct: 1 MSKFRLAVVQLH-VSKIKADNLGRAQTLVTEAAGQGAKVVVLPECFNS---PYGTGFFKE 56 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKINL- 117 + + + S+T +VG P +D + N+ + G ++ KI+L Sbjct: 57 YAEKIPGESTQVLSETAKKCGIYLVGGSIPEEDGGKLYNTCSVFGPDGTLLVTHRKIHLF 116 Query: 118 ----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-- 171 P F E T G S ++G+ IC DI + + + + K+G + L Sbjct: 117 DIDVPGKIRFQESETLSPGKSLSMFETPYCKVGVGICYDI-RFAELAQIYAKKGCQLLVY 175 Query: 172 ---FSLNASPYYHNKLKKRHEIVTGQI 195 F++ P H +L +R V Q+ Sbjct: 176 PGAFNMTTGP-AHWELLQRGRAVDNQV 201 >gi|325109429|ref|YP_004270497.1| N-carbamoylputrescine amidase [Planctomyces brasiliensis DSM 5305] gi|324969697|gb|ADY60475.1| N-carbamoylputrescine amidase [Planctomyces brasiliensis DSM 5305] Length = 296 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 38/279 (13%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--PEDLVFKKSFIQ 64 +A+ Q+ V D N+A+A +A +G ++ ELF YP ED F + Sbjct: 10 VAVLQMR-CVQDKDTNVARATELVRDAAGKGAQIVCLQELFHGLYPCQAEDHAL---FAE 65 Query: 65 A------CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKIN 116 A + A+ L + G +V+ + G+ N+ V+ D G+ + K++ Sbjct: 66 AEPIPGPITQAMGKLAGEL---GIVLVISMFEKRAAGLYHNTAVVFDVDGSQCGLYRKMH 122 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSNICKHLKKQGAEFL 171 +P+ ++EK F G + F+ R+G+ +C D W + GAE L Sbjct: 123 IPDDPLYYEKFYFTPG----DLGFKSFDTKFGRVGVCVCWDQW-FPEAARLTALTGAEIL 177 Query: 172 FSLNASPYYHNK-----LKKRHEIVTGQISHVHLPIIYV---NQVGGQDELIFDGASFCF 223 F A ++ ++ + T SH +YV N+VG + E+ F G SF Sbjct: 178 FYPTAIGWHPSEKDEFGAAQHSAWETMMRSHAIANGVYVAAPNRVGSEGEIEFWGGSFIC 237 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHY---DQQLSQWNYMSD 259 D L + +Q M + + D + W ++ D Sbjct: 238 DPYGNLLQKGSVGEDQILMADCDFKLMDTARTHWPFLRD 276 >gi|289810712|ref|ZP_06541341.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 259 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 38/230 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 14 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAITELREETGDNALQFIAVRLPYGVQA 73 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 74 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 127 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 128 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 179 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P + +K P+A+L RP D+ +L Y +DD ++ Sbjct: 180 -LAALG-----CPEHLYKKVPTADLEDDRPSLPDEAALGVTYDNIDDYLE 223 >gi|148543583|ref|YP_001270953.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lactobacillus reuteri DSM 20016] gi|184152991|ref|YP_001841332.1| hypothetical protein LAR_0336 [Lactobacillus reuteri JCM 1112] gi|148530617|gb|ABQ82616.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lactobacillus reuteri DSM 20016] gi|183224335|dbj|BAG24852.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] Length = 261 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 15/226 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV----FK 59 + K+A+AQL+ +G+ A N KA++A EEA D+++ E++ GY + L Sbjct: 2 RRKVALAQLDIQLGNPAENYQKAKQAIEEAANHHADIVVLPEMWNIGYALDQLAELADEN 61 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLP 118 Q S + LK+ + G + V ++ + N+ + D GN+I+ +K++L Sbjct: 62 GQKTQQFFSEL-ALKNQINIVGGSVAV----RNGQSFFNTTYVYDQNGNLISSYEKVHL- 115 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + +E + +G + I IC D+ + + + + G + L+ P Sbjct: 116 -FGLMNEDQYLEAGQKENHFKLAGIPSASFICYDL-RFPEWIRTVARYGTDILYFPAEWP 173 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++++ ++ + ++ VN+VG E F+G S D Sbjct: 174 --SKRIEQWKIMLRSRAIENQAFVVAVNRVGTDLENSFNGHSLVID 217 >gi|327393691|dbj|BAK11113.1| NH(3)-dependent NAD(+) synthetase NadE [Pantoea ananatis AJ13355] Length = 285 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 54/283 (19%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P + + + V L+ Y+ +++ K +++G+SGG DS L +A A+ + +T Sbjct: 26 PTIDPQQEIRTSVDFLKAYLTRHSGVKTLVLGISGGQDSTLTGKLAQMAITELRQETGDK 85 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV-NHFFSLMSQFLQEEPSG 376 + LPY + D C AL + P LV N ++++ + +G Sbjct: 86 DYTFIAVRLPYGVQA-----DEQDCQDALAF---IQPDRSLVVNIKEAVLASERALKDAG 137 Query: 377 IVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 IV N ++R R +++ +K +++ T + +E G+ T YGD NP+ Sbjct: 138 IVLSDFIRGNEKARERMKAQYSIAGMTKGVVVGTDHGAEAVTGFFTKYGDGGSDINPIFR 197 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K Q QL T P + K P+A+L RP D+ +L Y Sbjct: 198 LNKRQGKQLLK--------------TLGCPEHLYLKKPTADLEDDRPGLQDEVALGVTYD 243 Query: 488 ILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 ++DD ++ + E+ +E +E+KRR Sbjct: 244 MIDDYLE------------GKTIAPESATIIEGWYLKTEHKRR 274 >gi|227893032|ref|ZP_04010837.1| NAD synthetase [Lactobacillus ultunensis DSM 16047] gi|227865145|gb|EEJ72566.1| NAD synthetase [Lactobacillus ultunensis DSM 16047] Length = 276 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 46/263 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQ------TIMLPYKYTS 332 L+DY++ N F K ++G+SGG DS L + A++ + KE + LPY + Sbjct: 31 LKDYLKANLFLKSYVLGISGGQDSTLTGKLCQMAMEEMRKETGDDSYQFIAVRLPYGVQA 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQEEPSGIV---AENIQSRI 386 A + P DL+ + M + ++ I NI++R Sbjct: 91 DADDAADAVAFQQ--------PDQDLIVNIKEPVDAMVKVVEATGQKITDFNKGNIKARE 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ +K ++ T + +E G+ T YGD + PL F+L R Sbjct: 143 RMVVQYAIAGANKGAVVGTDHAAENFSGFYTKYGDGAADLTPL--------FRLDK-RQG 193 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 + LG P + EK+P+A+L + D LP L K I + E Sbjct: 194 KMLLKELG-----CPEHLYEKAPTADLEEEKPD---LPDEVALGVTYKEIDDYLEG---- 241 Query: 507 DQEYNDETVRYVEHLLYGSEYKR 529 ++ +D+ +E L S++KR Sbjct: 242 -KDVSDKAAEQIEKLWNKSKHKR 263 >gi|302562636|ref|ZP_07314978.1| NAD+ synthetase [Streptomyces griseoflavus Tu4000] gi|302480254|gb|EFL43347.1| NAD+ synthetase [Streptomyces griseoflavus Tu4000] Length = 276 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 34/250 (13%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVD---ALGKE-NVQ 322 E E + V L + + +++G+SGG+DS LC +AV+ A G E Sbjct: 24 EAEQEIERRVAFLAERLTSTGLRSLVLGISGGVDSTVAGRLC-QLAVERARAGGHEARFH 82 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKY----DVLPIHD-LVNHFFSLMSQFLQEEPSGI 377 + LPY + + DA + + D+ P D + + F Sbjct: 83 AMRLPYGIQADE--HDAQLALSFIKADHVLTVDIKPAADAALEATLTAGVSFRDARHEDF 140 Query: 378 VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 V N+++R R A++ +++ T +E G+ T +GD + PL L K +V Sbjct: 141 VHGNVKARQRMIAQYAVAGAQDGLVVGTDQAAEALTGFFTKFGDGAADLVPLAGLTKRRV 200 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---HQTDQESLP-PYPILDDII 493 LA LG P ++ K P+A+L + D+++L Y ++DD + Sbjct: 201 RALA---------DALGA-----PTGLVWKVPTADLESLDEGKADEDALGVTYDVIDDFL 246 Query: 494 KRIVENEESF 503 + + E+F Sbjct: 247 EGKPVDREAF 256 >gi|330876870|gb|EGH11019.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 249 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 20/209 (9%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI--Q 64 +A AQ + G + N+A + A G D +LF EL ++GY P DL + + Sbjct: 6 LAAAQFCSIRGQLKHNLAGHLAFMQRAADLGADYLLFPELSLTGYEP-DLAHELTLSPND 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKINLPNYSE 122 AC I L VG P + G + ++ G++IA + P Sbjct: 65 ACLEPIRALSMHLQ---LMTTVGLPLKGPGGSIEIGALTFTAHGDVIAYGKQYLHPG--- 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP--YY 180 E F G + + R+G+ +C D ++ + + + S+ SP Y Sbjct: 119 --EDAVFSPGSEDCYLQLSQHRIGLCVCADFSHPEHVQRLSEGGAGVYAASVLISPGGYA 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 H+ E++ G LP++ N G Sbjct: 177 HDS-----ELLAGHARRHRLPVLMANHGG 200 >gi|169780804|ref|XP_001824866.1| cyanide hydratase [Aspergillus oryzae RIB40] gi|238504998|ref|XP_002383728.1| nitrilase, putative [Aspergillus flavus NRRL3357] gi|83773606|dbj|BAE63733.1| unnamed protein product [Aspergillus oryzae] gi|220689842|gb|EED46192.1| nitrilase, putative [Aspergillus flavus NRRL3357] Length = 317 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP------- 53 M K+K+A Q PV D+ G ++K ++A + G ++ F E+FI GYP Sbjct: 1 MTSKVKVAAVQAEPVWNDLQGGVSKVISLIKDAAKNGAKVVGFPEVFIPGYPWSIWTNSA 60 Query: 54 -EDLVFKKSFIQ----ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGN 107 E++ F + + S ++ +K + G IV+G+ + + + + +D G Sbjct: 61 IENVSFMNEYFENSMERESEEMERIKIAVREAGVFIVLGYSERYRGSLYIAQSFIDPTGT 120 Query: 108 IIAVRDKINLPNYSE 122 I+ R KI P + E Sbjct: 121 IVHHRRKIK-PTHVE 134 >gi|222479124|ref|YP_002565361.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Halorubrum lacusprofundi ATCC 49239] gi|222452026|gb|ACM56291.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Halorubrum lacusprofundi ATCC 49239] Length = 268 Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 91/235 (38%), Gaps = 30/235 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A QL G I N+A A A EA G DL++ ELF GY F Sbjct: 1 MRLACVQLGVEGGAIEDNVAAAMEAVREAAADGADLVVLPELFDVGY----FAFDAYARA 56 Query: 65 ACSSAIDTLK-----SDTHDGG--AGIVV---------GFPRQDQEGVLNSVVILD-AGN 107 A S A D L +D D AG VV G EG+ N+ V+ D +G Sbjct: 57 AESVAGDRLSRFAAVADEEDINVLAGTVVEDLAASAADGIEAPADEGLANTAVLFDRSGE 116 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 V K +L Y E + G +++G+ C D+ + + + + G Sbjct: 117 RRLVYRKRHLFGYGS-EETDRMVPGERVPMTDIEGVQVGVTTCYDL-RFPEQFRQMVEAG 174 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 E + +A PY + H G+ + + YV V G IFD + C Sbjct: 175 VECVLVPSAWPY----PRVEHWRTLGRARAIE-NLTYVAAVNGSG--IFDSDALC 222 >gi|332828339|gb|EGK01048.1| hypothetical protein HMPREF9455_02570 [Dysgonomonas gadei ATCC BAA-286] Length = 291 Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 22/260 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 +KI I Q DI NI + EA +QG LI+ EL S Y ED Sbjct: 1 MKIGIIQ-QANTPDIKQNINNLKDKVREAAKQGAQLIVLQELHNSLYFCQVEDTNIFDLA 59 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVR-DKINLPNY 120 + D + + G IV+ + G+ N+ V+++ IA + K+++P+ Sbjct: 60 ETIPGPSTDEFGALAKELGVVIVLSLFERRAPGLYHNTAVVMEKDGTIAGKYRKMHIPDD 119 Query: 121 SEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 ++EK F G PI +LG+L+C D W + + GA+ L A + Sbjct: 120 PAYYEKFYFTPGDLGFKPIETSLGKLGVLVCWDQWY-PEAARLMAMAGADLLIYPTAIGW 178 Query: 180 -----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVG------GQ-DELIFDGASFCFD 224 K ++ V Q H L ++ VN+ G GQ + + F G SF Sbjct: 179 ESTDSQEEKDRQLGAWVISQRGHAVANGLHVVSVNRTGYEPDPSGQTNGITFWGNSFVAG 238 Query: 225 GQQQLAFQMKHFSEQNFMTE 244 Q ++ +Q + E+ M E Sbjct: 239 PQGEILWQATNDKEEVRMVE 258 >gi|167768350|ref|ZP_02440403.1| hypothetical protein CLOSS21_02907 [Clostridium sp. SS2/1] gi|167709874|gb|EDS20453.1| hypothetical protein CLOSS21_02907 [Clostridium sp. SS2/1] gi|291560322|emb|CBL39122.1| Predicted amidohydrolase [butyrate-producing bacterium SSC/2] Length = 264 Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 13/156 (8%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 KIA+AQ G+ NI KA++ ++A + +I+F E F++ YP + + K Sbjct: 3 KIAVAQTTSS-GNWRENIEKAKQYIKKATEEEAVMIIFPEYFMNYYPDAEHNYTKKAQSL 61 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVIL-DAGNIIAVRDKINLPNYSE 122 + +K + I+ G Q D+ N++VIL D G +++ K +L N + Sbjct: 62 HGEFVQAMKMLAKEFKMWIIFGMNEQTVDETKNYNTMVILNDLGELVSDYKKTHLFNAYK 121 Query: 123 FHEKRTFISGYSNDPIVFRDIR-----LGILICEDI 153 ++E + G +F I+ +G+ IC D+ Sbjct: 122 WNESMNTLKG----DCLFTPIKTPAGVIGLGICYDL 153 >gi|85710234|ref|ZP_01041299.1| hydrolase [Erythrobacter sp. NAP1] gi|85688944|gb|EAQ28948.1| hydrolase [Erythrobacter sp. NAP1] Length = 291 Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 25/244 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVF 58 + L +A QL D A NIA EEA ++G LIL ELF Y ++ +F Sbjct: 1 MSTLTVAALQLELQREDEADNIAAVAALVEEAAQRGAKLILPPELFSGPYFCREEDEALF 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + A ++ ++ I F +D N++ ++ G ++ K ++ Sbjct: 61 ALAKPTAEHPSVIAMRELAARLKVAIPTSFFERDGHHYYNTLAMIGPDGEVLGTYRKSHI 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRD--------IRLGILICEDIWKNSNICKHLKKQGAE 169 P+ + EK F G ND D +R+G+ IC D W + + +GAE Sbjct: 121 PDGPGYEEKYYFRPG--NDGFKVWDVRGDQGQSVRIGVGICWDQW-YPECARVMALKGAE 177 Query: 170 FLF---SLNASPY---YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ---DELIFDGAS 220 L ++ + PY R ++ +S+ +P+I N++G + E F G S Sbjct: 178 MLLYPTAIGSEPYDADLDTSRMWRRAMIGHAVSNC-MPVIASNRIGAEGPAGEQSFYGHS 236 Query: 221 FCFD 224 F D Sbjct: 237 FISD 240 >gi|258515056|ref|YP_003191278.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Desulfotomaculum acetoxidans DSM 771] gi|257778761|gb|ACV62655.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Desulfotomaculum acetoxidans DSM 771] Length = 276 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 20/184 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-VFKK 60 +K +++A Q+ + G N+AK EEA + +D++ F EL + GY E + + Sbjct: 1 MKDIRVAAVQMQAIAGQTKENLAKIIMYSEEAAARKVDVLCFPELCVQGYNRETARIMAE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV--LNSVVILDAGNIIAVRD----K 114 + S AI L + I+ G + G+ + + G I R K Sbjct: 61 TIPGESSEAISQLARKKN---ITILAGIAEKSAAGLPYITQLAAFPDGTIKKYRKTHLGK 117 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LP ++ + +++D +F GI IC D+ + L QGAE +F+ Sbjct: 118 SELPYFTPGE----VLPVFNSDKAMF-----GIAICWDL-HFPEVTTILALQGAEIIFAP 167 Query: 175 NASP 178 +ASP Sbjct: 168 HASP 171 >gi|206564316|ref|YP_002235079.1| NAD synthetase [Burkholderia cenocepacia J2315] gi|238693130|sp|B4EIP2|NADE_BURCJ RecName: Full=NH(3)-dependent NAD(+) synthetase gi|198040356|emb|CAR56341.1| putative NH(3)-dependent NAD(+) synthetase [Burkholderia cenocepacia J2315] Length = 282 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 32/243 (13%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTI 324 P + EA+ + + L Y++ ++G+SGG+DS+ A ++V+ L + Sbjct: 21 PHFDAEAEIDRRIDFLAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLSVERLRADGYDAR 80 Query: 325 MLPYKYTSPQSLE-DAAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPS 375 + + P ++ D +AL DV P D ++ + F Sbjct: 81 FIAMRL--PNGVQNDEEDAQRALAFVRADEVLTVDVKPAADAMLRSLVASGHAFDTPAQQ 138 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 V NI++R R A++ + +++ T + +E +G+ T +GD PL L K Sbjct: 139 DFVHGNIKARERMIAQYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADILPLAGLNKR 198 Query: 436 QVFQLASWRNSHGITSGLGP---LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDD 491 +V G+ LG + +P + LE ELRP + D+ + Y +DD Sbjct: 199 RV---------RGVARALGGEELIVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDD 244 Query: 492 IIK 494 ++ Sbjct: 245 FLE 247 >gi|91216016|ref|ZP_01252985.1| putative NH(3)-dependent NAD+ synthetase NadE [Psychroflexus torquis ATCC 700755] gi|91185993|gb|EAS72367.1| putative NH(3)-dependent NAD+ synthetase NadE [Psychroflexus torquis ATCC 700755] Length = 259 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 9/163 (5%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 +Y++ + +IG+SGGIDSA+ + + GK + + LP Q + A Sbjct: 16 EYLENSGQKGFLIGVSGGIDSAVTSTLCAQT-GKPTL-CLELPIHQHEDQ-VSRARKHID 72 Query: 345 ALGCKYD-VLPIH-DLVNHFFSLMSQFLQEEP---SGIVAENIQSRIRGNILMALSNHSK 399 L +++ V + DL N F + + + E N ++R+R L + Sbjct: 73 HLERRFENVSSVKIDLSNTFETFKNSLPEIEDIDLRDFSLANSRARLRMTTLYYFAGIHG 132 Query: 400 AMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 ++ T NK E VG+ T YGD +P+ DL K++VF+LA Sbjct: 133 YLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVFELA 175 >gi|330718274|ref|ZP_08312874.1| transaminase [Leuconostoc fallax KCTC 3537] Length = 666 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 20/253 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-------- 56 +K+A+AQ++ + D+ N + +A +A Q D+++ E++ SGY + L Sbjct: 1 MKVALAQIDIQLADVDKNEQRIMQAVAQAADQEADVVVLPEMWNSGYALQRLKEVADVGG 60 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 K +Q+ S D + G + G QE V+ + G ++ DK++ Sbjct: 61 TRTKQLLQSLSKEYDI---NIVGGSVATLKG-----QEFYNTMYVVSNDGQCLSEYDKVH 112 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 L HE R +G + +IC DI + ++ + A+ L+ + Sbjct: 113 L--IGLMHEDRYMTAGSHLNTFELAGTPSAGVICYDIRFPEWVRTNMAQIPAKVLYVVAQ 170 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 P ++++ ++ + ++ VN+VG D+ F G S D + + Sbjct: 171 WPI--QRIEQWQVMLQSRAIENQAYVVAVNRVGADDDNTFGGRSLVIDPLGHIMIKGSAE 228 Query: 237 SEQNFMTEWHYDQ 249 E+ ++T+ + Q Sbjct: 229 KEEIYVTDIDFAQ 241 >gi|297194540|ref|ZP_06911938.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|297152315|gb|EFH31662.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 236 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 17/156 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS--F 62 +KIA Q V GDI N+ + A QG L+ F EL +GY DL+ + + Sbjct: 51 MKIAAGQFTSVPGDIEANVGSMQGLVRAAAGQGAALVAFCELAATGY-DLDLIAGRPELW 109 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGF------PRQDQEGVLNSVVILDAGNIIAVRDKIN 116 + +D L+ +VG PR ++++VI G ++A DK + Sbjct: 110 LAEDDPRLDPLREACRTTSTAALVGCAALTSGPRPS----ISALVIGPDGELLARYDKTH 165 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 L Y E E F +G + +R + +C D Sbjct: 166 L--YGE--ENDVFTAGTRDGRFTLDGVRFAVAVCYD 197 >gi|303289537|ref|XP_003064056.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454372|gb|EEH51678.1| predicted protein [Micromonas pusilla CCMP1545] Length = 361 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 27/222 (12%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + +K+A+ QL D NIA+AR A A G L++ E++ Y E Sbjct: 54 RVVKVALCQLACPTADKVANIARAREAIRNAAEGGAALVVLPEMWNCPYANESFPAHAET 113 Query: 63 IQACSSAID-TLKSDTHDGGAGIVVG--FPRQ----------DQEGVL-NSVVILDAGNI 108 I A T+ S+ ++VG P + D+E VL N+ + D Sbjct: 114 IGANDPTPSVTMLSEAAAAHDIVLVGGSIPERGVGVGGGGGADEEDVLYNACCVFDGKRG 173 Query: 109 IAVRDK------INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH 162 + R + +++P F E T G + R+G+ IC D+ + + Sbjct: 174 LIARHRKTHLFDVDIPGEISFRESDTLTEGEGLTVVDTAVGRVGVGICFDV-RFGEMAAA 232 Query: 163 LKKQGAEFL-----FSLNASPYYHNKLKKRHEIVTGQISHVH 199 + +GA+ L F+ P +H +L +R V Q +H Sbjct: 233 MANRGADVLIYPGAFNTVTGP-HHWELLQRARAVDNQARSIH 273 >gi|16330497|ref|NP_441225.1| hypothetical protein slr1717 [Synechocystis sp. PCC 6803] gi|2829609|sp|P73846|Y1717_SYNY3 RecName: Full=Uncharacterized protein slr1717 gi|1652988|dbj|BAA17905.1| slr1717 [Synechocystis sp. PCC 6803] Length = 268 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 + +I SGG+DS L A +A D LG +N I P+ LEDA A A+ +G ++ Sbjct: 16 LDRALIAYSGGVDSTLVAKVAYDVLG-QNAVAITAVSPSLLPEELEDAQAQAQWIGIAHE 74 Query: 352 VLPIHDLVNHFFS 364 ++ +++ N ++ Sbjct: 75 LVQTNEMANPNYT 87 >gi|32471567|ref|NP_864560.1| beta-alanine synthetase [Rhodopirellula baltica SH 1] gi|32443408|emb|CAD72241.1| beta-alanine synthetase [Rhodopirellula baltica SH 1] Length = 303 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 22/232 (9%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K ++A+AQ+ + GD GN+ + A EEA+ +G +++ E + G+ V K+ Sbjct: 53 KVCRVAMAQIYCIDGDREGNLRRIENAVEEASAKGAEIVCLPETCLYGW-----VNAKAH 107 Query: 63 IQA---CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL-DAGNIIAVRDKINLP 118 A D L + VG ++ + + +SVV++ D G +I K+N+ Sbjct: 108 ELAHPIPGKDTDALSEIAKKNRVFLSVGLSEKEGDQLYDSVVLIDDEGELILKHRKMNVL 167 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL----FSL 174 + + G S + + + R+G+LIC D + + + + +Q L ++ Sbjct: 168 THL---MSPPYTRGDSVEIVETKFGRVGMLICADTFHDETVQRMAGEQPDLLLVPYGWAA 224 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG-----QDELIFDGASF 221 NA + + R I + + PI+ N VG +I+ G S+ Sbjct: 225 NAGDWPQHGTSLRDTIARAAKT-IGCPIVGTNVVGSISGGPWQGMIYGGQSY 275 >gi|305664217|ref|YP_003860505.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230] gi|304378786|gb|ADM28625.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230] Length = 298 Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K+++ SGG+DS L A +A D LG N + + + DA AK +G +++V Sbjct: 33 EKIVVMFSGGVDSTLLAKLAYDVLG-NNAIAVTIDSPVIPRSEIRDAIQIAKLIGIRHEV 91 Query: 353 LPIHDLVNHFF 363 + I +L N + Sbjct: 92 IEIDELRNKYL 102 >gi|295426529|ref|ZP_06819179.1| NAD+ synthetase [Lactobacillus amylolyticus DSM 11664] gi|295063897|gb|EFG54855.1| NAD+ synthetase [Lactobacillus amylolyticus DSM 11664] Length = 276 Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 46/263 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY++ N F K ++G+SGG DS L + A+ + +T + LPY + Sbjct: 31 LKDYLKANPFLKSYVLGISGGQDSTLTGKLCQMAIEEMRQETGDDSYQFIAVRLPYGVQA 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHF---FSLMSQFLQEEPSGIV---AENIQSRI 386 A + P DL+ + M + L+ I NI++R Sbjct: 91 DADDAADAVAFQK--------PDQDLIVNIKEPVDAMVKVLEAAGQKITDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ +K ++ T + +E G+ T YGD + PL F+L R Sbjct: 143 RMVVQYAIAGANKGAVVGTDHAAENICGFYTKYGDGAADLAPL--------FRLDK-RQG 193 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 + LG P + EK+P+A+L + D+ LP D++ + + Sbjct: 194 KMLLKELG-----CPAHLYEKAPTADL---EEDKPDLP-----DEVALGVTYRDIDDYLE 240 Query: 507 DQEYNDETVRYVEHLLYGSEYKR 529 +E +++ +E L S++KR Sbjct: 241 GKEVPEKSAEQIEKLWNKSKHKR 263 >gi|212225075|ref|YP_002308311.1| carbon-nitrogen hydrolase [Thermococcus onnurineus NA1] gi|212010032|gb|ACJ17414.1| carbon-nitrogen hydrolase [Thermococcus onnurineus NA1] Length = 264 Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 21/178 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A Q+ P + + N +KA R +EA ++G L++ ELF +GY E + ++ Sbjct: 1 MRVAYVQMEPKLLEPEKNYSKAERLIKEAAKEGAKLVVLPELFDTGYNFES----RDEVE 56 Query: 65 ACSSAI------DTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILD--AGNIIAVRDKI 115 + + I + L D IV G +D++G L NS VI+ I K+ Sbjct: 57 SVAGQIPDGETTEFLVELARDLEVFIVAGTAEKDEKGRLYNSAVIVGPIGWGYIGKYRKV 116 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFL 171 +L F+ ++ F + VF +++G++IC D W + L +GAE + Sbjct: 117 HL-----FYREKLFFESGNLGFHVFNIGIVKVGVMICFD-WFFPESARTLALKGAEII 168 >gi|323492810|ref|ZP_08097952.1| putative carbon-nitrogen hydrolase [Vibrio brasiliensis LMG 20546] gi|323312881|gb|EGA66003.1| putative carbon-nitrogen hydrolase [Vibrio brasiliensis LMG 20546] Length = 288 Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 16/238 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLV 57 M K +K A QL D+ N+ KA+ A EA G ++IL ELF + Y E Sbjct: 1 MSKVVKFAALQLTKSW-DLEDNLNKAKAAIREAAAHGANVILPQELFAAPYFCKKQEAKY 59 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F+ + A I + + G I V + + NS+V++DA G ++ K + Sbjct: 60 FELAEETANCRLIKEMSELAKELGVVIPVSYFEKAGNTFFNSLVMIDADGTVLENYRKSH 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 +P+ + EK F G + + + G IC D W + + L GAE +F Sbjct: 120 IPDGPGYSEKYYFSPGDTGFKVWQTKFGKFGAGICWDQW-FPELARSLALHGAEAIFYPT 178 Query: 173 SLNASPYYHNKLKKRH--EIVTGQISHVHLPIIYVNQVGGQD----ELIFDGASFCFD 224 ++ + P + H + G + +P+I N+VG + E F G+SF D Sbjct: 179 AIGSEPQDPTLDSRDHWQRTMQGHSAANLVPVIASNRVGTEVDDGIETTFYGSSFITD 236 >gi|167615654|ref|ZP_02384289.1| NAD synthetase [Burkholderia thailandensis Bt4] Length = 284 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 38/229 (16%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ ++G+SGGIDS+ A +AV+ L + LPY + Sbjct: 38 DYLRAAGLRTCVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG-----AQH 92 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMS-QFLQEEPSGIVAENIQSRIRGN 389 D A +AL DV P D + + +L V NI++R R Sbjct: 93 DEADAQRALAFVRADETLTVDVKPAADAMLAALATGGLAYLDHAHQDFVLGNIKARERMI 152 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ + +++ T + +E +G+ T +GD PL L K +V +LA + + Sbjct: 153 AQYAVAGARRGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRELARMLGADEL 212 Query: 450 TSGLGPLTEVIPPSILEKSPSAE---LRPHQTDQESLP-PYPILDDIIK 494 ++ K+P+A+ LRP D+++ Y +DD ++ Sbjct: 213 --------------LVMKTPTADLETLRPQLPDEQAYGITYEQIDDFLE 247 >gi|108803920|ref|YP_643857.1| hypothetical protein Rxyl_1079 [Rubrobacter xylanophilus DSM 9941] gi|108765163|gb|ABG04045.1| conserved hypothetical protein [Rubrobacter xylanophilus DSM 9941] Length = 279 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++ SGG+DS+L A+AV AL +E V + + P LE A A +LG +++V+ Sbjct: 21 ALVAFSGGVDSSLALAVAVRALSRERVLAVTSCNETYLPSELEKARELAASLGVRHEVIN 80 Query: 355 IHDL 358 +L Sbjct: 81 TREL 84 >gi|325277720|ref|ZP_08143287.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas sp. TJI-51] gi|324097147|gb|EGB95426.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas sp. TJI-51] Length = 245 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 2/92 (2%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ QL + G+++ N+ + E+A G +L++F EL ++GY P V +++ + Sbjct: 1 MKLCAVQLASLKGEVSANLQRHLACIEQAAALGAELVVFPELSLTGYEPS--VARQAAMP 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV 96 + +D L++ + G + VG P +G+ Sbjct: 59 VSARQLDPLQAASDRLGITVAVGLPLPAPDGI 90 >gi|303249410|ref|ZP_07335633.1| asparagine synthase [Desulfovibrio fructosovorans JJ] gi|302489188|gb|EFL49157.1| asparagine synthase [Desulfovibrio fructosovorans JJ] Length = 273 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++ SGG+DS L A+DAL E V + L YT P + A A+ +G ++++L Sbjct: 20 ALVAFSGGVDSLLVLRAALDALSPEAVPAVTLRTPYTPPHDVAAATRAARNMGARHEILD 79 Query: 355 I 355 I Sbjct: 80 I 80 >gi|302907752|ref|XP_003049716.1| hypothetical protein NECHADRAFT_29975 [Nectria haematococca mpVI 77-13-4] gi|256730652|gb|EEU44003.1| hypothetical protein NECHADRAFT_29975 [Nectria haematococca mpVI 77-13-4] Length = 248 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 20/163 (12%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDL 56 K +++A+ Q P+ D+AG + K EA G ++I F E ++SGYP P D Sbjct: 7 KHVRVAVTQAEPIWLDLAGTVQKTCDLITEAASTGAEVISFPECWLSGYPAWIWDRPVDP 66 Query: 57 VFKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 +I+ S+ ++ +++ + +GF + S I+ A G I+ + Sbjct: 67 ELAARYIRNSLVVESAEMERIRACAAANKIIVALGFSESRHGSLYISQAIIGADGQILTL 126 Query: 112 RDKINLPNYSEFHEKRTFISGYSN---DPIVFRDI-RLGILIC 150 R KI H +RT + D +V + R+G L C Sbjct: 127 RSKIK-----ATHMERTIFGDATAECLDSVVDTPLGRIGALSC 164 >gi|268679904|ref|YP_003304335.1| Queuosine synthesis-like protein [Sulfurospirillum deleyianum DSM 6946] gi|268617935|gb|ACZ12300.1| Queuosine synthesis-like protein [Sulfurospirillum deleyianum DSM 6946] Length = 261 Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 15/106 (14%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 +++ ++I+ SGG+DS+ A D LG ENV I L Y + +E+A A +G + Sbjct: 13 SSYERLIVAFSGGVDSSFLLKTAYDVLG-ENVLAISLQTPYIAESEIEEARRIADEIGAR 71 Query: 350 YDVL--PIHD-----------LVNH-FFSLMSQFLQEEPSGIVAEN 381 + VL P + L H FS ++ F Q+ ++AE Sbjct: 72 HLVLVKPWMEELRTNPKERCYLCKHALFSSLTTFAQQRDFRVIAEG 117 >gi|113955275|ref|YP_730753.1| nitrilase [Synechococcus sp. CC9311] gi|113882626|gb|ABI47584.1| Possible nitrilase [Synechococcus sp. CC9311] Length = 273 Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 24/171 (14%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 D N A A + A R+G +L+ E F G + L + + S + T+ Sbjct: 16 DPESNFAAAEEQIDLAARRGAELVALPENFAFMGDDAQRLEVAPALSEQASRFLVTMARR 75 Query: 77 THDGGAGIVV---GFPRQDQEG---VLNSVVILDAGNIIAVRDKI-----NLPNYSEFHE 125 IVV GFP +G S ++ G ++A DKI +LP+ S + E Sbjct: 76 YQ-----IVVLGGGFPVPTGDGQHHFQRSQLVGRDGQVLASYDKIHLFDVDLPDGSSYRE 130 Query: 126 KRTFISGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 +F G S P+V D+ R+G+ IC D+ + + +HL GAE L Sbjct: 131 SASFSPGMSPPPVV--DVPGLCRVGLSICYDV-RFPELYRHLVGAGAELLM 178 >gi|227363456|ref|ZP_03847579.1| cyanide hydratase [Lactobacillus reuteri MM2-3] gi|325681935|ref|ZP_08161453.1| carbon-nitrogen family hydrolase [Lactobacillus reuteri MM4-1A] gi|227071502|gb|EEI09802.1| cyanide hydratase [Lactobacillus reuteri MM2-3] gi|324978579|gb|EGC15528.1| carbon-nitrogen family hydrolase [Lactobacillus reuteri MM4-1A] Length = 266 Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust. Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 15/226 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV----FK 59 + K+A+AQL+ +G+ A N KA++A EEA D+++ E++ GY + L Sbjct: 7 RRKVALAQLDIQLGNPAENYQKAKQAIEEAANHHADIVVLPEMWNIGYALDQLAELADEN 66 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLP 118 Q S + LK+ + G + V ++ + N+ + D GN+I+ +K++L Sbjct: 67 GQKTQQFFSEL-ALKNQINIVGGSVAV----RNGQSFFNTTYVYDQNGNLISSYEKVHL- 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + +E + +G + I IC D+ + + + + G + L+ P Sbjct: 121 -FGLMNEDQYLEAGQKENHFKLAGIPSASFICYDL-RFPEWIRTVARYGTDILYFPAEWP 178 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++++ ++ + ++ VN+VG E F+G S D Sbjct: 179 --SKRIEQWKIMLRSRAIENQAFVVAVNRVGTDLENSFNGHSLVID 222 >gi|77918622|ref|YP_356437.1| amidohydrolase [Pelobacter carbinolicus DSM 2380] gi|77544705|gb|ABA88267.1| predicted amidohydrolase [Pelobacter carbinolicus DSM 2380] Length = 295 Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 27/227 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L + + Q D N+ K+ +A QG L++ EL S L F ++ Sbjct: 1 MNELTVGLVQ-QSCSADRQNNLEKSVAGIRQAVSQGAQLVVLQELHTS------LYFCQT 53 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVG---------FPRQDQEGVLNSVVILDAGNIIAVR 112 C +T+ + D I F R+ N+ V+ + IA R Sbjct: 54 EDTDCFDLAETIPGPSTDLFGQIARELNVVIVTSLFERRAAGLYHNTAVVFEKDGTIAGR 113 Query: 113 -DKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K+++P+ ++EK F G PI +LG+L+C D W + + GAE Sbjct: 114 YRKMHIPDDPGYYEKFYFTPGDLGFTPITTSLGKLGVLVCWDQWY-PEAARLMAMAGAEM 172 Query: 171 LFSLNASPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVG 209 L A + + ++R VT Q +H LP+I VN+ G Sbjct: 173 LIYPTAIGWDPRDDDAERQRQRDAWVTIQRAHAVANGLPVIAVNRTG 219 >gi|332295173|ref|YP_004437096.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermodesulfobium narugense DSM 14796] gi|332178276|gb|AEE13965.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermodesulfobium narugense DSM 14796] Length = 255 Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 17/224 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q++ ++ D N K +RA EA++ + L++F E F+SGY + K Sbjct: 1 MKVGLFQMD-ILKDFDQNFEKTKRAILEASKNELKLLVFPETFLSGYYKSSI---KRVSD 56 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE-- 122 S D L + + I FP ++ + N G+ IA KI+L Sbjct: 57 RLSYYFDQLCFMSREYQIDIYGTFPVKENANLYNCGFYFSEGSCIARYKKIHLIGIMGER 116 Query: 123 --FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E + + SN R+G+ IC D+ + +K ++ ++ + Sbjct: 117 DIFSEGKEVVVAESN-----LIGRVGLAICYDL----RFPELFRKISTNSKITIVSAMWP 167 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +++ ++ + +I VN+VG ++ G S FD Sbjct: 168 KTRIEHWKTLLKARSIENQCFVIGVNRVGSDKNNVYPGNSLVFD 211 >gi|289624015|ref|ZP_06456969.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650510|ref|ZP_06481853.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868166|gb|EGH02875.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 246 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 49/229 (21%), Positives = 92/229 (40%), Gaps = 17/229 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ GDI N+A + A G +LF EL ++GY P+ + + + A Sbjct: 6 LAVAQFCSARGDIEQNLAGHLAFMQRAADLGASYLLFPELSLTGYEPD--LARALALHAD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN-YSEFHE 125 + ++ +K+ +G P ++ N +++ A A D I Y E Sbjct: 64 DARLEPIKALAMKLRLVTTIGVPLKEA----NDSILIGALTFTADGDVITYAKQYLHPGE 119 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 + F G + + R+G+ +C D + ++ + + S+ SP Sbjct: 120 DKVFSEGNKDCYLSIDQHRIGLCVCADFTQPEHVQRMAAGGAWVYAASVLISP---GGYA 176 Query: 186 KRHEIVTGQISHVHLPIIYVNQ---VGGQDEL----IFDGASFCFDGQQ 227 + E++ G +LP++ N GG + ++DGA G Q Sbjct: 177 QDAELLAGHARRHNLPVLVANHGAPTGGWESAGRSGLWDGAGRWIGGMQ 225 >gi|150019164|ref|YP_001311418.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium beijerinckii NCIMB 8052] gi|149905629|gb|ABR36462.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium beijerinckii NCIMB 8052] Length = 264 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 17/217 (7%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQG--MDLILFTELFISGYPPEDLVFKKSFIQACSSA 69 + P + D+ N+ K E + DLI+F EL SGY + + + S++ Sbjct: 1 MEPKLSDVKYNLEKMVTFINEIMEKDSKTDLIVFPELITSGYECGNKFKDLAEVVESSNS 60 Query: 70 IDTLKSDTHDGGAGIVVGFPRQD---QEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHE 125 + + G IV GFP +D + + NS V +D+ G + V K++L + E Sbjct: 61 VKVISELAKKFGTNIVYGFPEKDGALTDVLYNSSVCIDSNGRVAGVYRKVHLFD----TE 116 Query: 126 KRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 KR F +G + PI ++G++IC D + + +GAE L + + Sbjct: 117 KRYFKAG-CDFPIFNTSFGKIGVMICWDT-AFPEVARTYCLKGAELLV---VNTNWEKPY 171 Query: 185 KKRHEIVTGQISHVH-LPIIYVNQVGGQDELIFDGAS 220 ++VT + + + ++ N++G EL F G S Sbjct: 172 SDDWDLVTRARAFDNCMYLVAANRIGQDKELGFFGHS 208 >gi|268564027|ref|XP_002647071.1| C. briggsae CBR-NIT-1 protein [Caenorhabditis briggsae] Length = 307 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 29/47 (61%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIAI Q V+ D + +AK ++ +EA G +L+LF E FI GYP Sbjct: 1 KIAIVQAGTVLYDKSATLAKVKKYVDEAAGNGAELVLFPEAFIGGYP 47 >gi|40890191|gb|AAR97440.1| nitrilase [uncultured organism] Length = 311 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 28/174 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP----------- 53 +K+AIAQ+ PVV D A I KA A ++G++L++F E FI YP Sbjct: 2 IKVAIAQVAPVVLDKARTIEKAVGIIRAAAQEGIELLVFPETFIPTYPAWVWRLRPGTDY 61 Query: 54 ---EDL--VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILD 104 E+L + + + S ++ L++ + +V+G +D + + N++V++ Sbjct: 62 GLSEELHALLLDNSVDMESKDLEPLQAVAAETSMTVVIGMNERDGRFSRGTIYNALVVIG 121 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKN 156 G I R + +P E+ + G ++ V RLG LIC W+N Sbjct: 122 PGGTILNRHRKLMPTNP---ERMVWGMGDASGLKVVEMSYGRLGGLIC---WEN 169 >gi|320583111|gb|EFW97327.1| NT-amidase, putative [Pichia angusta DL-1] Length = 318 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 9/157 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFK 59 +L+IA QLNP++G N + A R ++ + D+I+F E+ ++GY P + + Sbjct: 2 RLRIAAIQLNPLLGKFEENASTALRLVDQIRSKKPDIIIFPEMALTGYNFAGPKQIEPYL 61 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLP 118 + Q + + K+ + ++G+P + NS +++ G+++ K L Sbjct: 62 EE--QGGGRSFEFAKNVSQSLKCHTILGYPERHSSTTYNSAMLIGPDGSLVHNYRKSFLY 119 Query: 119 NYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDI 153 E + +G+ IV R IR I IC D+ Sbjct: 120 KTDEVWGAKESPTGFEAFDIVINDRKIRSTIGICMDL 156 >gi|317497712|ref|ZP_07956027.1| carbon-nitrogen hydrolase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895046|gb|EFV17213.1| carbon-nitrogen hydrolase [Lachnospiraceae bacterium 5_1_63FAA] Length = 264 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 13/156 (8%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 KIA+AQ G+ NI KA++ ++A + +I+F E F++ YP + + K Sbjct: 3 KIAVAQTTSS-GNWRENIEKAKQYIKKATEEEAVMIIFPEYFMNYYPDAEHNYTKKAQSL 61 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVIL-DAGNIIAVRDKINLPNYSE 122 + +K + I+ G Q D+ N++VIL D G +++ K +L N + Sbjct: 62 HGEFVQAMKMLAKEFKMWIIFGMNEQTVDETKNYNTMVILNDLGELVSDYKKTHLFNAYK 121 Query: 123 FHEKRTFISGYSNDPIVFRDIR-----LGILICEDI 153 ++E + G +F I+ +G+ IC D+ Sbjct: 122 WNESMNTLKG----DCLFTPIKTPAGVIGLGICYDL 153 >gi|156035677|ref|XP_001585950.1| hypothetical protein SS1G_13042 [Sclerotinia sclerotiorum 1980] gi|154698447|gb|EDN98185.1| hypothetical protein SS1G_13042 [Sclerotinia sclerotiorum 1980 UF-70] Length = 717 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 125/597 (20%), Positives = 216/597 (36%), Gaps = 138/597 (23%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK-SFIQA 65 +A LN D GN + + A G L + EL I+GY +D + + + + Sbjct: 7 LATCNLNQWALDFDGNQKRIIESIRRAKSAGASLRVGPELEITGYGCQDHFLESDTELHS 66 Query: 66 CSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S + + HD I+ +G P + + N VI I+ +R K++L + + Sbjct: 67 WESLAEII---AHDDCRDILLDIGMPVRHKNVNYNCRVICYNAKILLIRPKLSLASDGNY 123 Query: 124 HEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWKNSN 158 E+R F ++G P I D G CE+++ Sbjct: 124 REQRWFTPWKGQRIVEQYYLPRLITKVTGQHKVPIGDAVISTYDSCFGAETCEELFTPRA 183 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFD 217 ++ G E + + S + KL R E++ +Y NQ G D L +D Sbjct: 184 PHINMSLDGVEIFTNSSGSHHELRKLNIRLELIKEATLKAGGIYLYANQQGCDGDRLYYD 243 Query: 218 GASFCFDGQQQLAFQMKHFS------------------EQNFMTEWHYDQQLSQWNY--- 256 G++ + +A Q FS + F + ++ + + Sbjct: 244 GSAMIVVNGRVVA-QASQFSLNDVEVVTATVDLEEVRAYRTFRSRAMQARETAPYERIEA 302 Query: 257 ---MSDDSA------------STMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +S D+ S Y +EE A AC L DY++++ + LSG Sbjct: 303 GMSLSSDAEDVNPLVQPTKEISIKYHVPEEEIALGPACF--LWDYLRRSRQAGYFVPLSG 360 Query: 302 GIDSALCAAI----------AVDA-------------LGKE--------NVQTIMLPYKY 330 GIDS + I AV+ +G+E N Q I + Sbjct: 361 GIDSCATSVIVHSMCRIVFAAVEKGDNPQVIEDLLRIVGEEEDSTWRPSNSQDIANRIFH 420 Query: 331 T----SPQSLEDAAACAKALGCK-------YDVLPIHDLVNHFFSLMSQFLQE------- 372 T S S + + AK LG K +++ + V F+ ++ + + Sbjct: 421 TAYMGSTNSSSETRSRAKDLGEKIGSYHLNFNIDNVVSAVTTLFTTVTNYTPKYKMYGGT 480 Query: 373 EPSGIVAENIQSRIR-------GNILMALSNHSKA---MLLTTSNKSEISVGYGTLYGDM 422 S + +NIQ+R+R +L + +K ++L ++N E GY T Y Sbjct: 481 PASNLALQNIQARLRMVLAYLFAQLLPTVRGRTKPGSLLVLGSANVDESLRGYFTKYDCS 540 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 S NP+ + KT + + W + T PL + ++ P+AEL P D Sbjct: 541 SADINPIGAISKTDLKRFILWAS----TEFEMPLLQ----DFIDAPPTAELEPITED 589 >gi|239945351|ref|ZP_04697288.1| putative hydrolase [Streptomyces roseosporus NRRL 15998] gi|239991808|ref|ZP_04712472.1| putative hydrolase [Streptomyces roseosporus NRRL 11379] gi|291448810|ref|ZP_06588200.1| hydrolase [Streptomyces roseosporus NRRL 15998] gi|291351757|gb|EFE78661.1| hydrolase [Streptomyces roseosporus NRRL 15998] Length = 280 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 12/185 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y PE Sbjct: 1 MSHVVRAALVQAT-WTGDTESMIAKHEEHAREAARQGAKIIGFQEVFNAPYFCQVQEPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRD 113 + + + + ++ + G IVV +Q G N+ ++DA G+ + Sbjct: 60 YRWAEPVPDGPT--VKRMQGLARETGMVIVVPVFEIEQSGFYYNTAAVIDADGSYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G + P+ + ++G+ IC D + L GA+ ++ Sbjct: 118 KHHIPQVKGFWEKYYFKPGNAGWPVFDTAVGKVGVYICYDR-HFPEGWRQLGLAGAQLVY 176 Query: 173 SLNAS 177 + +A+ Sbjct: 177 NPSAT 181 >gi|330984412|gb|EGH82515.1| NAD synthetase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 270 Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 36/214 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ-------TIMLPY-----KY 330 ++ ++ N H +++G+SGG+DS A+ A + + + LPY ++ Sbjct: 31 IKSQLKDNGLHALVLGISGGVDSLTAGALGQRAATELRAEGYDATFIAMRLPYGVQADEH 90 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ-FLQEEPSGIVAENIQSRIRGN 389 + QSL+ + + I V+ + + F + V NI++R R Sbjct: 91 EAQQSLDFIQPD------RVVTVNIKAAVDGMLEAIDEPFASDAERDFVKGNIKARQRMI 144 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ +K +++ T E G+ T +GD PL L K V LA + Sbjct: 145 AQYAIAGKNKGLVIGTDQGPEALCGFFTKFGDGGADITPLTGLIKRFVRSLAEHMGA--- 201 Query: 450 TSGLGPLTEVIPPSILEKSPSAELR---PHQTDQ 480 P +++ K P+A+L P + D+ Sbjct: 202 -----------PANLVGKVPTADLEDLNPQKPDE 224 >gi|325917991|ref|ZP_08180157.1| putative amidohydrolase [Xanthomonas vesicatoria ATCC 35937] gi|325535790|gb|EGD07620.1| putative amidohydrolase [Xanthomonas vesicatoria ATCC 35937] Length = 243 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 31/245 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ AQ+ G I GNI+K A +G D+++F EL ++GY P + + +Q Sbjct: 1 MKLTAAQILSTPGQIEGNISKHLDVIRLAASKGADVLVFPELSLTGYEPG--LAQALAVQ 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS--E 122 D + + G I VG P + +G S++ G + +YS + Sbjct: 59 PADQRFDQFQLASDRYGMLIAVGAPTKGAKGTEISMLCFQPG--------LKRTSYSKQQ 110 Query: 123 FH-EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 H ++ F + S P++ D L IC + + S H ++ A + + Y Sbjct: 111 LHPDEFPFFTAGSEQPVLRHADQLLAPAICYESLQAS----HAEQAAA------SGAGVY 160 Query: 181 HNKLKKRHEIVTGQISHV-------HLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + K VT SH + ++ N VG D I G S + L Sbjct: 161 LASVAKSERGVTSAYSHYPTIAKTHSMTVLMANCVGPADTFIGAGRSAIWSSDGDLVCSA 220 Query: 234 KHFSE 238 F E Sbjct: 221 DAFQE 225 >gi|309364710|emb|CAP24462.2| CBR-NIT-1 protein [Caenorhabditis briggsae AF16] Length = 282 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 29/47 (61%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIAI Q V+ D + +AK ++ +EA G +L+LF E FI GYP Sbjct: 3 KIAIVQAGTVLYDKSATLAKVKKYVDEAAGNGAELVLFPEAFIGGYP 49 >gi|146309613|ref|YP_001190078.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas mendocina ymp] gi|145577814|gb|ABP87346.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudomonas mendocina ymp] Length = 573 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 11/151 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISG-YPPEDLVFKKS 61 K+ ++A+ Q P AGN+ + EA +G +L++F EL +SG Y D+ K Sbjct: 289 KRSRVAVGQFTPAAKQ-AGNLQRITELAVEAKAEGAELVVFPELALSGPYRGADMAESKD 347 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + L +V GF +D E + NS V++ ++ KI+L Sbjct: 348 -----GAGVSALLRLAQRLRLHLVAGFVERDGEALYNSAVLVGPEGVVGCYRKIHLNE-- 400 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICED 152 E+ +G R+G+LI ED Sbjct: 401 --QERAWATAGECWRHYDLPFGRIGLLIGED 429 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 28/196 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKS 61 +KIA Q PV+GD A NI + EEA + G +LI+ E+ +GY E++ Sbjct: 6 VKIAAIQFEPVMGDKARNIERLSALVEEAAKAGAELIVTPEMATTGYCWMSREEIAAHVE 65 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPN 119 + +SA + +D IV+G P D + L NS ++ ++ K + P Sbjct: 66 TVPGATSAHFAELARRYD--CYIVIGLPEVDDDSGLYYNSAFLVGPQGLVGTHRKTH-PY 122 Query: 120 YSEFHEKRTFISGYS--NDPIVFRDIRLGILICEDI----------WKNSNICKHLKKQG 167 +E G+ + PI R+ +LIC DI +++ HL Sbjct: 123 IAEPKWAAPGDRGHQVFDTPIG----RIALLICMDIHFLETARVAGLGGADVICHL---- 174 Query: 168 AEFLFSLNASPYYHNK 183 + +L +PY+ N+ Sbjct: 175 SNWLAERAPAPYWINR 190 >gi|239813728|ref|YP_002942638.1| NAD synthetase [Variovorax paradoxus S110] gi|239800305|gb|ACS17372.1| NAD+ synthetase [Variovorax paradoxus S110] Length = 282 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 30/248 (12%) Query: 262 ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 A+ P+ + A+ L DY++ +++G+SGG+DS +A A+ K Sbjct: 17 AALHVAPVFDAAAEIERRTAFLADYLRGTGLKALVLGISGGVDSLTAGCLAQRAVEKLRA 76 Query: 322 Q-------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ----FL 370 + + LPY + E A+ + + + I + + + + F Sbjct: 77 EGYGATFIAMRLPYGVQKDEH-EAQASLSVIRPDRILTVDIRPAADGMLAALKKGDLAFR 135 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 V NI++R R A++ +++ T + +E +G+ T +GD + PL Sbjct: 136 DAAHEDFVLGNIKARQRMIAQFAVAGAHDGIVIGTDHAAEALMGFFTKFGDGAADVTPLS 195 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PY 486 L K +V LA + P +++ K P+A+L P + D+++ Y Sbjct: 196 GLDKRRVRALAQRLGA--------------PDALVFKVPTADLESLVPGKPDEDAFGVSY 241 Query: 487 PILDDIIK 494 +DD ++ Sbjct: 242 EQIDDFLE 249 >gi|86356835|ref|YP_468727.1| NAD synthetase [Rhizobium etli CFN 42] gi|86280937|gb|ABC90000.1| probable NH(3)-dependent NAD(+)synthetase protein [Rhizobium etli CFN 42] Length = 277 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 44/234 (18%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQ--TIMLPYKYTSPQS 335 L++Y+ + ++G+SGG+DS A +A A+ G + + LPY + Sbjct: 34 LKNYLVGSGMRGYVLGISGGVDSLTAALLAQKAVRELRGGGHAAEFVAVRLPYGVQA--- 90 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA-----------ENIQS 384 D A +AL + P +V + + L G +A NI++ Sbjct: 91 --DEADAERALAT---IGPDRSMVVNIKAAADAMLAAAQDGGLAFADAGRQDFILGNIKA 145 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R R AL+ +++ T + +E +G+ T +GD + PL L K +V LA Sbjct: 146 RQRMIAQFALAGALGGLVIGTDHAAEAVMGFFTKFGDGAADILPLAGLNKRRVRLLAKRL 205 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + P ++ K P+A+L RP + D+E+ Y +DD ++ Sbjct: 206 GA--------------PDELIFKVPTADLEDQRPLRPDEEAYGVSYDEIDDFLE 245 >gi|89073756|ref|ZP_01160270.1| NAD(+) synthetase [Photobacterium sp. SKA34] gi|89050531|gb|EAR56023.1| NAD(+) synthetase [Photobacterium sp. SKA34] Length = 278 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 50/240 (20%) Query: 285 DYVQK----NNFHKVIIGLSGGIDSALC---AAIAVDALGK----ENVQTIMLPYKYTSP 333 D++QK + +++G+SGG+DS C A +AV+ L + + Q I + Y Sbjct: 26 DFIQKKLKQSGCKSLVLGISGGVDSTTCGRLAQLAVNGLNQVSNSNDYQFIAVRLPYGEQ 85 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHF-----FSLMSQFLQEEPSGI----------V 378 Q ED A A + P H + + + S L E +G+ V Sbjct: 86 QD-EDEAQLALHF-----IQPSHSVSVNIKKGVDATHASTLLSLENTGLIPSDKAKVDFV 139 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 N+++R R ++ +++ T + +E G+ T +GD + PL L K QV Sbjct: 140 KGNVKARTRMIAQYEIAGLVGGLVIGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQV- 198 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 I + LG P ++ K P+A EL P + D+++L Y +DD ++ Sbjct: 199 --------RAIGAKLGA-----PEQLVYKVPTADLEELAPQKADEDALQVSYDQIDDFLE 245 >gi|83746201|ref|ZP_00943255.1| probable conserved hypothetical protein [Ralstonia solanacearum UW551] gi|207744110|ref|YP_002260502.1| predicted amidohydrolase protein [Ralstonia solanacearum IPO1609] gi|83727167|gb|EAP74291.1| probable conserved hypothetical protein [Ralstonia solanacearum UW551] gi|206595514|emb|CAQ62441.1| predicted amidohydrolase protein [Ralstonia solanacearum IPO1609] Length = 249 Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 16/157 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + IA AQ GD+ GN+ + EA + + LI+F EL ++GY E + + Sbjct: 1 MSQPFAIAAAQSVSAAGDVQGNVGRHLAFLHEAAARHVRLIVFPELSLTGY--ESAIAHE 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPN 119 + + A + + L+ VVG P + +GV + ++ ++ G ++ Sbjct: 59 AAMHADDARLAPLRDACVRKRLTAVVGAPLRFDDGVRIGALTLMPDGKVV---------T 109 Query: 120 YSEFH----EKRTFISGYSNDPIVFRDIRLGILICED 152 Y++ H E F +G PI + + IC D Sbjct: 110 YTKQHLHPGEGAVFTAGAGGPPISVDGQTIALAICAD 146 >gi|255321559|ref|ZP_05362717.1| hydrolase, carbon-nitrogen family [Campylobacter showae RM3277] gi|255301415|gb|EET80674.1| hydrolase, carbon-nitrogen family [Campylobacter showae RM3277] Length = 290 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 17/149 (11%) Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G++ K+++P+ F+EK F G +PI RLG+L+C D W + + Sbjct: 104 GSVAGKYRKMHIPDDPGFYEKFYFTQGDIGFEPIDTSVGRLGLLVCWDQW-YPEAARLMA 162 Query: 165 KQGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQ-DE-- 213 +GA+ L A ++ K ++ V Q H LP+I VN+VG + DE Sbjct: 163 LRGAKLLIYPTAIGWFEGDEEAEKSRQLEAWVAVQRGHAVANGLPVIAVNRVGFEADESG 222 Query: 214 ----LIFDGASFCFDGQQQLAFQMKHFSE 238 + F G SF F Q + F+ SE Sbjct: 223 VMEGIKFWGNSFVFGAQGEELFRADSQSE 251 >gi|157413032|ref|YP_001483898.1| putative nitrilase [Prochlorococcus marinus str. MIT 9215] gi|157387607|gb|ABV50312.1| Possible nitrilase [Prochlorococcus marinus str. MIT 9215] Length = 275 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 18/168 (10%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTL--K 74 ++ N +A E A+R+G +LI E F G E L + C++ + T+ + Sbjct: 16 NVEANFVEAEEQIELASRRGAELIGLPENFAFLGEDDEKLRLASELSEKCTNFLKTMSQR 75 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRT 128 + G G V P D N S + G ++A DKI +LP+ + + E T Sbjct: 76 YQVYLLGGGYPV--PAGDDSHTFNRSALFGKDGQVLAKYDKIHLFDVDLPDGNLYKESST 133 Query: 129 FISGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 +SG P+V D+ ++G+ IC D+ + + ++L GAE + Sbjct: 134 ILSGAEYPPVV--DVPGLCKIGLSICYDV-RFPELYRYLSSNGAELIM 178 >gi|145220139|ref|YP_001130848.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Prosthecochloris vibrioformis DSM 265] gi|145206303|gb|ABP37346.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeovibrioides DSM 265] Length = 290 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 88/216 (40%), Gaps = 15/216 (6%) Query: 20 AGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDTLKSDT 77 A N++KA EA G +I ELF S Y ED L+ Sbjct: 20 ARNLSKAVEKIREAAAGGARIICTQELFTSTYFCQTEDYAPFALAEPVPGPTTRILQDLA 79 Query: 78 HDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 + IV G+ N+ V++DA G + K+++P+ F+EK F G Sbjct: 80 RELEVVIVASLFEMRAPGLYHNTAVVVDADGQYLGRYRKMHIPDDPGFYEKFYFTPGDLG 139 Query: 136 DPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK---KRHEIV 191 + R +G+LIC D W + GAE LF A + + +R ++ Sbjct: 140 YRVFKTRYATIGVLICWDQW-YPEAARLTALMGAEILFYPTAIGWASGEQSLEVRRSQLA 198 Query: 192 ---TGQISHVHLPIIYV---NQVGGQDELIFDGASF 221 T Q SH +YV N+VG + EL F G+SF Sbjct: 199 AWKTIQQSHAIANGVYVAAANRVGREGELEFWGSSF 234 >gi|225561138|gb|EEH09419.1| NAD synthetase 1 [Ajellomyces capsulatus G186AR] Length = 720 Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 33/250 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + I+ LN V D GN ++ + A G L + EL I+GY +D + Sbjct: 1 MAPLVTISTCSLNQWVLDFEGNTSRIIESIRIAKAAGARLRVGPELEITGYSCQDHFLEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I T+ I +G P + N+ + + I+ ++ K+ L Sbjct: 61 DLYLHVWQCIATIIDHPDCQDILIDIGAPIR-----YNARIHILNRRILLIKPKMWLAGD 115 Query: 121 SEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWK 155 + ++E R F I+G + PI D +GI CE+++ Sbjct: 116 ANYYEYRWFTSWAKPRYVEDYYLERIVGEITGQATVPIGDAVISTYDSAIGIETCEELFT 175 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDE 213 +N H+ G E + + S + KLK+R +++ + +Y NQ G G Sbjct: 176 PNNPGIHMGLNGVEIFTNSSGSHHELRKLKQRIDLIR-HCTRGGGIYLYANQRGEDGNGR 234 Query: 214 LIFDGASFCF 223 L FDG++ F Sbjct: 235 LYFDGSAGIF 244 >gi|189500251|ref|YP_001959721.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides BS1] gi|189495692|gb|ACE04240.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides BS1] Length = 311 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 29/174 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS--- 61 L++A AQ+ P+ + + KA EA R G L++F E FISGYP + S Sbjct: 7 LRVAAAQVAPIFLNRDKTVEKACDVIAEAGRNGAQLVVFPEAFISGYPDWVWLIPNSKGA 66 Query: 62 --------FIQACSSAIDTLKSD----THDGGAGIVVGFPRQDQEG----VLNSVVIL-D 104 +Q S DT S +V+G ++ E + N+++ + D Sbjct: 67 VLNELYAELVQNALSIPDTSTSKLCKVAKQSKIHVVIGILERNTEASNASLFNTLLFIDD 126 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD--IRLGILICEDIWKN 156 GNI+ K+ +P + E+ + G + VF RLG LIC W+N Sbjct: 127 HGNIMGKHRKL-IPTGA---ERLVWAQGDGSTLQVFDTSFARLGGLIC---WEN 173 >gi|91070265|gb|ABE11184.1| putative nitrilase [uncultured Prochlorococcus marinus clone HF10-11H7] Length = 275 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 14/166 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N A+A E A R+G +LI E F G E L + C++ + T+ Sbjct: 16 NVEANFAEAEEQIELAARRGAELIGLPENFAFLGGDDEKLRLASELSEKCANFLKTMSQR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P D N S + G I+A DKI +LP+ + + E T + Sbjct: 76 YQVFLLGGGYPVPAGDDSHTFNRSALFGKDGQILAKYDKIHLFDVDLPDGNLYKESSTIL 135 Query: 131 SGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG P+V D+ ++G+ IC D+ + + ++L GAE + Sbjct: 136 SGAEYPPVV--DVPGLCKVGLSICYDV-RFPELYRYLSSNGAELIM 178 >gi|73668424|ref|YP_304439.1| carbon-nitrogen hydrolase [Methanosarcina barkeri str. Fusaro] gi|72395586|gb|AAZ69859.1| carbon-nitrogen hydrolase [Methanosarcina barkeri str. Fusaro] Length = 266 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 51/241 (21%), Positives = 96/241 (39%), Gaps = 29/241 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A Q+N + N+ +A EEA + +++ F E+F +G+ + +V + Sbjct: 1 MKAACIQMNISLCSKKENLERALSLAEEAVSKEAEVLAFPEVFSTGFCYDHIV---ELAE 57 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-----------LNSVVILDAGNIIAVRD 113 S D I+ G + +EG N +++G ++ + Sbjct: 58 TASGPTIGALCDFSKENECILAGSMIEHREGSEFSSEMNIPPQFNLGFCIESGKLVGIHR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFL 171 K L EK F G PI + D+ +G+++C +I + + + L +GA+ L Sbjct: 118 KTQLYGL----EKEYFALGEDIHPIRLKKYDLSMGLMVCNEI-RYPEVSRKLALEGADLL 172 Query: 172 FSLNASP---YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 S + P Y ++ + Q+ H I N+ G + G SF DG + Sbjct: 173 VSASDMPDFYIYPWRIMSLSRAIENQLPH-----IACNRAGNDRFSTYPGRSFIADGWGR 227 Query: 229 L 229 + Sbjct: 228 I 228 >gi|330819568|ref|YP_004348430.1| aliphatic nitrilase [Burkholderia gladioli BSR3] gi|327371563|gb|AEA62918.1| aliphatic nitrilase [Burkholderia gladioli BSR3] Length = 337 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 35/195 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ A AQ+ P + A + K A +EA +G+ LI+F E F+ YP Sbjct: 7 IRAAAAQIAPDLARAAATLDKVCAAIDEAAAKGVQLIVFPETFVPYYPYFSFVRPPVASG 66 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 E + + + + + G +V+G +D + N+ ++ DA G+++ Sbjct: 67 AEHMRLYEEAVVVPGPVTEAVAERARRHGMVVVLGVNERDHGSLYNTQLVFDADGSLLLK 126 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSN-------I 159 R K+ FHE+ + G D R + R+G L C W++ N + Sbjct: 127 RRKLT----PTFHERMIWGQG---DAAGLRVVDTAVGRVGALAC---WEHYNPLARYALM 176 Query: 160 CKHLKKQGAEFLFSL 174 +H + A+F SL Sbjct: 177 AQHEQIHCAQFPGSL 191 >gi|313891425|ref|ZP_07825041.1| protein ExsB [Dialister microaerophilus UPII 345-E] gi|329121409|ref|ZP_08250034.1| transcription regulator ExsB [Dialister micraerophilus DSM 19965] gi|313120200|gb|EFR43376.1| protein ExsB [Dialister microaerophilus UPII 345-E] gi|327469699|gb|EGF15166.1| transcription regulator ExsB [Dialister micraerophilus DSM 19965] Length = 230 Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 11/90 (12%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + II SGG+DS C ++AVD LG+ENV T + Y + LE C V Sbjct: 3 RAIILSSGGVDSTTCISVAVDKLGRENVATASIFYGQKHEKELE----------CARKVA 52 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 ++L ++ F+L +Q LQ ++A++ + Sbjct: 53 QFYNLKHYEFNL-AQVLQYSNCPLLAKSTK 81 >gi|148239371|ref|YP_001224758.1| nitrilase [Synechococcus sp. WH 7803] gi|147847910|emb|CAK23461.1| Possible nitrilase [Synechococcus sp. WH 7803] Length = 275 Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 24/171 (14%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 D N + A + A R+G +LI E F G P + L + S + T+ Sbjct: 18 DPEANFSAAEEQIDLAARRGAELIGLPENFAFIGEPEQRLAIAPALADQASQFLITMARR 77 Query: 77 THDGGAGIVV---GFPRQDQEGV---LNSVVILDAGNIIAVRDKI-----NLPNYSEFHE 125 +V+ GFP +G + ++ G I+A DKI +LP+ S + E Sbjct: 78 YQ-----VVILGGGFPVPVGDGAHTWQRAQLVGRDGQILASYDKIHLFDVDLPDGSSYRE 132 Query: 126 KRTFISGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 +F G + P+V D+ R+G+ IC D+ + + +HL GAE L Sbjct: 133 SSSFTPGSTLPPVV--DVPGLCRVGVSICYDV-RFPELYRHLVGAGAELLM 180 >gi|290889528|ref|ZP_06552618.1| hypothetical protein AWRIB429_0008 [Oenococcus oeni AWRIB429] gi|290480726|gb|EFD89360.1| hypothetical protein AWRIB429_0008 [Oenococcus oeni AWRIB429] Length = 275 Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust. Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 50/280 (17%) Query: 268 PLQEEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDSALC---AAIAVDAL----GKE 319 P+ + + + + L++Y+ N + ++ +SGG DS L A IA++ L G + Sbjct: 16 PVINAKDEIDRTIAFLKNYLIANPQYKSYVLAISGGQDSTLTGKLARIAINQLRQETGND 75 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIV 378 + I + Y EDA K V P + + + SG+ Sbjct: 76 QYEFIAVRQPYGEQADEEDAQTALKF------VAPDQTITTNIKEATDALTKTLRVSGLA 129 Query: 379 AEN-----IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 ++ I+ ++R A++ ++L T + +E G+ T YGD +PL L Sbjct: 130 VDDMSRGSIKPKMRMIAQYAVAREHDGVVLGTDHAAEAFAGFFTKYGDGGTDLDPLWRLD 189 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K+Q Q+ N+ P S+ K PSA+L RP D+ +L Y + Sbjct: 190 KSQGQQMLKALNA--------------PESLYNKVPSADLEDKRPQLPDEVALGVKYKDI 235 Query: 490 DDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 D ++ +E ++E + +E L +++KR Sbjct: 236 DKYLE------------GREVSEEAAKQIEKLYLTTKHKR 263 >gi|303231219|ref|ZP_07317957.1| protein ExsB [Veillonella atypica ACS-049-V-Sch6] gi|302514126|gb|EFL56130.1| protein ExsB [Veillonella atypica ACS-049-V-Sch6] Length = 229 Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 5/91 (5%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK--- 349 K ++ SGG+DS C A+A++ GKENV + + Y + LE AA G + Sbjct: 5 QKAVVLFSGGVDSTTCLALAIERFGKENVVPLSIQYGQKHSKELEAAANVLSYYGIEGKT 64 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 DV + N SL+ Q ++ P+G E Sbjct: 65 MDVTKLFAFSNS--SLLKQSTEDVPTGSYKE 93 >gi|289435084|ref|YP_003464956.1| hydrolase, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171328|emb|CBH27870.1| hydrolase, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 298 Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------PED 55 LKIA+ Q + N+ A+ +EA QG DL+LF E++ +GY P D Sbjct: 2 LKIALVQKKAMANQKNTNLKLAQLYIKEAANQGADLVLFPEMWSNGYAAPFAEAFDNPLD 61 Query: 56 LVFKKSF-------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 ++K + S + L+ G+ + ++ + N+ +I+D G Sbjct: 62 PNYEKERTSWLEEGVTTSSDYVRALRQQAKAYHVGVCATYLSKNGKKNQNTAIIIDRNGE 121 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 II K++ +F + SG F +++G++IC D + + L +G Sbjct: 122 IILDYAKVHT---CDFSLESLLQSGTEFPVCEFDGVKIGVMICFDR-EFPESARTLMLKG 177 Query: 168 AEFLFSLNA---SPYYHNKLKKR 187 AE + NA +P N+L R Sbjct: 178 AEIILVPNACDMNPARINQLSTR 200 >gi|242399791|ref|YP_002995216.1| Carbon-nitrogen hydrolase [Thermococcus sibiricus MM 739] gi|242266185|gb|ACS90867.1| Carbon-nitrogen hydrolase [Thermococcus sibiricus MM 739] Length = 264 Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 13/174 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI Q+ P + D+ N++KA ++A +Q LI+ ELF GY E + Q Sbjct: 1 MKIGFIQMEPKLLDLNANLSKAETLIKDAAKQNAKLIVLPELFDVGYNFETKEEVEEIAQ 60 Query: 65 ACSSAIDT--LKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILD--AGNIIAVRDKINLPN 119 T L + IV G +D++G L NS VI+ G I KI+L Sbjct: 61 QIPDGETTQFLMEQAKEHDMFIVAGTAEKDEKGKLYNSAVIVGPIGGGYIGKYRKIHL-- 118 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+ ++ F + VF ++GI+IC D W + L +GA+ + Sbjct: 119 ---FYREKLFFEPGNLGFHVFNIGIAKVGIMICFD-WIFPEAMRTLALKGADIV 168 >gi|254172262|ref|ZP_04878938.1| carbon-nitrogen hydrolase [Thermococcus sp. AM4] gi|214034158|gb|EEB74984.1| carbon-nitrogen hydrolase [Thermococcus sp. AM4] Length = 263 Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 31/182 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A Q+ PV+ D N +KA R EA + LI+ ELF +GY +F Sbjct: 2 VKVAFGQMRPVLLDPEANYSKAERLVAEAAENDVRLIVLPELFDTGY---------NF-- 50 Query: 65 ACSSAIDTLKSDTHDGGAG-------------IVVGFPRQDQEGVL-NSVVILDAGNIIA 110 + + ++ + S DG I+ G +D+ G L NS V++ + Sbjct: 51 SSRAEVEEVASPIPDGRTTRLLLRLARRYRIFIIAGTAEKDRFGRLYNSAVVVGPAGYLG 110 Query: 111 VRDKINL-PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K++L EF E G+ + F R+G++IC D W + L +GAE Sbjct: 111 RYRKVHLFAREKEFFEPGNL--GFEVFNLGF--ARVGVMICFD-WFFPESARTLALKGAE 165 Query: 170 FL 171 + Sbjct: 166 II 167 >gi|238018562|ref|ZP_04598988.1| hypothetical protein VEIDISOL_00389 [Veillonella dispar ATCC 17748] gi|237865033|gb|EEP66323.1| hypothetical protein VEIDISOL_00389 [Veillonella dispar ATCC 17748] Length = 234 Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG+DS C A+A++ GK+NV + + Y + LE AA+ G + Sbjct: 10 QKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAASILAYYGIEGKT 69 Query: 353 LPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + + L SL++Q + P G E ++ G + Sbjct: 70 MDVTKLFAFSNCSLLTQSTEAIPQGSYKEQQETEGEGTV 108 >gi|160889602|ref|ZP_02070605.1| hypothetical protein BACUNI_02028 [Bacteroides uniformis ATCC 8492] gi|317480091|ref|ZP_07939202.1| carbon-nitrogen hydrolase [Bacteroides sp. 4_1_36] gi|156861119|gb|EDO54550.1| hypothetical protein BACUNI_02028 [Bacteroides uniformis ATCC 8492] gi|316903768|gb|EFV25611.1| carbon-nitrogen hydrolase [Bacteroides sp. 4_1_36] Length = 295 Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust. Identities = 60/274 (21%), Positives = 109/274 (39%), Gaps = 42/274 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+K+ I Q D+ N+ ++ E G L++ EL S Y Sbjct: 1 MTRKIKVGIIQ-QANTKDLRTNLMNLAKSIEACAAHGAQLVVLQELHNSLY--------- 50 Query: 61 SFIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-G 106 F Q ++ + L G +V + G+ N+ V+ + G Sbjct: 51 -FCQTENTQLFDLAEPIPGPSTGFYSELAAANDIVLVTSLFEKRAPGLYHNTAVVFERDG 109 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 +I K+++P+ ++EK F G +PI +LG+L+C D W + + Sbjct: 110 SIAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMAL 168 Query: 166 QGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE---- 213 +GAE L A + + K ++ + + Q H LP++ VN+VG + + Sbjct: 169 KGAEILIYPTAIGWESSDTDDEKARQLNAWIISQRGHAVANGLPVVSVNRVGHEPDPSMQ 228 Query: 214 ---LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++F G SF Q + Q + +N + E Sbjct: 229 TNGILFWGNSFVAGPQGEFLAQAGNERPENIVVE 262 >gi|90577767|ref|ZP_01233578.1| NAD synthetase [Vibrio angustum S14] gi|90440853|gb|EAS66033.1| NAD synthetase [Vibrio angustum S14] Length = 278 Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust. Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 38/230 (16%) Query: 287 VQKNNFHKVIIGLSGGIDSALC---AAIAVDALGK----ENVQTIMLPYKYTSPQSLEDA 339 ++++ +++G+SGG+DS C A +AV+ L + + Q I + Y Q ++A Sbjct: 32 LKQSGCKSLVLGISGGVDSTTCGRLAQLAVNGLNQVSNSNDYQFIAVRLPYGEQQDEDEA 91 Query: 340 AACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGI----------VAENIQSRIRG 388 + + V + I + V+ + S L E +G+ V N+++R R Sbjct: 92 QLALHFIQPSHSVSVNIKNGVDGTHA--STLLALENTGLIPSDNAKVDFVKGNVKARTRM 149 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 ++ +++ T + +E G+ T +GD + PL L K QV LA+ + Sbjct: 150 IAQYEIAGLVGGLVIGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRALAAKLGA-- 207 Query: 449 ITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQESLP-PYPILDDIIK 494 P ++ K P+A EL P + D+++L Y +DD ++ Sbjct: 208 ------------PEQLVYKVPTADLEELAPQKADEDALQVSYDQIDDFLE 245 >gi|58336849|ref|YP_193434.1| NAD synthetase [Lactobacillus acidophilus NCFM] gi|227903407|ref|ZP_04021212.1| NAD synthetase [Lactobacillus acidophilus ATCC 4796] gi|58254166|gb|AAV42403.1| NAD-synthetase [Lactobacillus acidophilus NCFM] gi|227868883|gb|EEJ76304.1| NAD synthetase [Lactobacillus acidophilus ATCC 4796] Length = 276 Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 32/256 (12%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L+DY++ N F K ++G+SGG DS L + A+ G ++ Q I + Y Sbjct: 31 LKDYLKANPFLKSYVLGISGGQDSTLTGKLCQMAIEEMREETGDDSYQFIAVRLPYGVQA 90 Query: 335 SLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 DAA K D ++ I + V+ ++ Q+ + NI++R R + A Sbjct: 91 DAADAADAVKFQNPDQDLIVNIKEPVDAMVKVVEATGQK-ITDFNKGNIKARQRMVVQYA 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ + ++ T + +E G+ T YGD + PL F+L R + L Sbjct: 150 IAGANNGAVVGTDHAAENFSGFYTKYGDGAADLTPL--------FRLDK-RQGKMLLKEL 200 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE 513 G P + EK+P+A+L +E P P D++ + E +E +++ Sbjct: 201 G-----CPKHLYEKAPTADL------EEEKPDLP--DEVALGVTYEEVDDYLEGKEVSEK 247 Query: 514 TVRYVEHLLYGSEYKR 529 +E L S++KR Sbjct: 248 AADQIEKLWNKSKHKR 263 >gi|21231638|ref|NP_637555.1| beta-alanine synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768240|ref|YP_243002.1| beta-alanine synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|188991376|ref|YP_001903386.1| Putative carbon-nitrogen hyrolase family protein [Xanthomonas campestris pv. campestris str. B100] gi|21113332|gb|AAM41479.1| beta-alanine synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573572|gb|AAY48982.1| beta-alanine synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|167733136|emb|CAP51334.1| Putative carbon-nitrogen hyrolase family protein [Xanthomonas campestris pv. campestris] Length = 294 Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 18/208 (8%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE----DLVFKKSFIQACSSAIDT 72 GD N+A EA QG L+L EL Y + D+ I S+ + Sbjct: 17 GDAEANLAVIESRVAEAAAQGAKLVLLQELHNGAYFCQHESVDVFDLAEPIPGPST--ER 74 Query: 73 LKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFI 130 L + G IV + G+ N+ V+L+A G ++ K+++P+ F+EK F Sbjct: 75 LGALAKQHGVVIVASLFERRAAGLYHNTAVVLEADGRLLGKYRKMHIPDDPGFYEKFYFT 134 Query: 131 SG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-----YHNKL 184 G P+ RLG+L+C D W + + GAE L A + + Sbjct: 135 PGDLGFTPVDTSVGRLGVLVCWDQWY-PEAARLMALAGAELLLYPTAIGWDPDDAQAEQE 193 Query: 185 KKRHEIVTGQISHV---HLPIIYVNQVG 209 ++R V H +P++ N+VG Sbjct: 194 RQRDAWVLSHRGHAVANGVPVLSCNRVG 221 >gi|40890237|gb|AAR97463.1| nitrilase [uncultured organism] Length = 365 Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 24/169 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------P 53 ++A PV D I K E+A R+G++L++F E F+ GYP Sbjct: 10 RLAAVHAAPVFMDTDATIDKVIGFVEQAGREGIELLVFPETFVPGYPYWIECYPPLQQVA 69 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPR--QDQEGVLNSVVILDA-GNIIA 110 + + + ++ I +++ G +V+G + NS V +DA G+++ Sbjct: 70 ANAQYTDASVEVPGPEIKRVQAACARAGVEVVLGVSERLRGTRTCFNSQVFIDADGSLLG 129 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNS 157 V K+ P Y E+ + G VF R R+G L C W+++ Sbjct: 130 VHRKLQ-PTYV---ERIVWAQGGGATLSVFGSRSGRIGGLAC---WEHT 171 >gi|294628315|ref|ZP_06706875.1| delta-aminovaleramide aminohydrolase [Streptomyces sp. e14] gi|292831648|gb|EFF89997.1| delta-aminovaleramide aminohydrolase [Streptomyces sp. e14] Length = 262 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 21/184 (11%) Query: 45 ELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD 104 E+F++GY D + + + A A D + G + G+P + E V NS ++ Sbjct: 41 EMFLTGYAIGDDIARLA-EPADGEAADAIAELAMRHGLAVAYGYPERAGEAVFNSAQLIS 99 Query: 105 AGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIV---FRDIRLGILICEDIWKN 156 A D L N+ + H E+R F G P+V + +G+LIC D+ Sbjct: 100 A-------DGARLANHRKTHLFGGFEQRHFTPG--GQPVVQAELNGLTVGLLICYDVEFP 150 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 N+ H G + L L + H +V + + + Y N+ G + E F Sbjct: 151 ENVRGH-ALAGTDLL--LVPTALMHPYQFVAESVVPVRAFENQMYVAYANRTGREGEFEF 207 Query: 217 DGAS 220 G S Sbjct: 208 TGLS 211 >gi|207728156|ref|YP_002256550.1| predicted amidohydrolase protein [Ralstonia solanacearum MolK2] gi|206591401|emb|CAQ57013.1| predicted amidohydrolase protein [Ralstonia solanacearum MolK2] Length = 249 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 16/157 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + IA AQ GD+ GN+ + EA + + L++F EL ++GY E + + Sbjct: 1 MSQPFAIAAAQSVSAAGDVRGNVGRNLAFLHEAAARHVRLVVFPELSLTGY--ESAIAHE 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPN 119 + + A + + L+ VVG P + +GV + ++ ++ G ++ Sbjct: 59 AAMHADDARLAPLRDACARKRLTAVVGAPLRFDDGVRIGALTLMPDGKVV---------T 109 Query: 120 YSEFH----EKRTFISGYSNDPIVFRDIRLGILICED 152 Y++ H E F +G PI + + IC D Sbjct: 110 YTKQHLHPGEGAVFTAGAGGPPISVDGQTIALAICAD 146 >gi|295400913|ref|ZP_06810889.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus thermoglucosidasius C56-YS93] gi|294977176|gb|EFG52778.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus thermoglucosidasius C56-YS93] Length = 272 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 17/194 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMD--LILFTELFISGYPPEDLVF 58 M +IA+ Q+ P+ DI+ N+AK E ++ D L+LF EL +GY + + Sbjct: 1 MAISYEIALTQMTPINSDISSNLAKMEAIANECKQKFPDVRLLLFPELCTTGYVLSETL- 59 Query: 59 KKSFIQACSSAI-DTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILD-AGNIIAVRDKI 115 K QA I + I G+ +D E NS++++ +G I KI Sbjct: 60 -KDVAQAWDGLIFQRMSRLAQKLQLYIAYGYVEKDDEVNFYNSLILIHPSGQCIGNYRKI 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 +L EK F G S +V ++ R+G++IC D+ + ++L GA L Sbjct: 119 HLTPL----EKAWFTPG-SKPVLVDTELGRIGLMICWDL-AFPELARYLAVHGAGLLLVP 172 Query: 175 NA--SPYYHNKLKK 186 A SP +H +K Sbjct: 173 CAWESP-FHEPFQK 185 >gi|228476513|ref|ZP_04061203.1| NAD+ synthetase [Streptococcus salivarius SK126] gi|228251934|gb|EEK10980.1| NAD+ synthetase [Streptococcus salivarius SK126] Length = 273 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 39/230 (16%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALC---AAIAVDALGKENVQ-----TIMLPYKYTSP 333 L+ Y+ K+ F K I+G+SGG DS L A +AV+ L E + I LPY Sbjct: 30 LKAYMLKHPFLKTYILGISGGQDSTLAGRLAQLAVEELRAETGKDYQFIAIRLPY---GV 86 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 Q+ ED A A A K DV + VN ++ Q + +G+ NI++R R Sbjct: 87 QADEDDAQRALAF-IKPDVSLV---VNIKEAVDGQVAELAKAGVTVSDFNKGNIKARQRM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ + ++ T + +E G+ T +GD PL L K R Sbjct: 143 ITQYAVAGENSGAVIGTDHAAENLTGFFTKFGDGGADILPLFRLNK---------RQGAA 193 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + + LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 194 LLAELGA-----DKALYEKVPTADLEEDKPGIADEVALGVTYREIDDYLE 238 >gi|303229849|ref|ZP_07316626.1| protein ExsB [Veillonella atypica ACS-134-V-Col7a] gi|302515479|gb|EFL57444.1| protein ExsB [Veillonella atypica ACS-134-V-Col7a] Length = 229 Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 5/91 (5%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK--- 349 K ++ SGG+DS C A+A++ GKENV + + Y + LE AA G + Sbjct: 5 QKAVVLFSGGVDSTTCLALAIERFGKENVVPLSIQYGQKHSKELEAAANVLSYYGIEGKT 64 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 DV + N SL+ Q ++ P+G E Sbjct: 65 MDVTKLFAFSNS--SLLKQSTEDVPTGSYKE 93 >gi|223939582|ref|ZP_03631457.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [bacterium Ellin514] gi|223891740|gb|EEF58226.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [bacterium Ellin514] Length = 293 Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 15/188 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLV-FKKS 61 L IA+ Q N+AKA R +EA QG +I+F E F++G P DL F + Sbjct: 3 LNIAVVQFEIEQFAPEKNLAKAERFIQEACTQGAQVIVFPEDFLTGPLPGRIDLADFDQR 62 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNY 120 +++ D G V D G+ N+ +D +G I+ KINL Sbjct: 63 YVKRFQELAVKFGIDIVPGSIIEV------DDNGLYNTTYYIDRSGKILGQYRKINL--- 113 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 E+R G R ++G+ IC D+ + + + QGA+ +F + Y Sbjct: 114 -WLTERRYLQPGRQAIVCSTRFGKIGLAICWDL-AFPELFRAMIMQGAQIVFCPSYWSYE 171 Query: 181 HNKLKKRH 188 + +RH Sbjct: 172 DAGVGQRH 179 >gi|119483824|ref|XP_001261815.1| nitrilase, putative [Neosartorya fischeri NRRL 181] gi|119409971|gb|EAW19918.1| nitrilase, putative [Neosartorya fischeri NRRL 181] Length = 318 Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 14/134 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-------PPE 54 + K+++ Q P D+ G +AK + +EA +G++++ F E++I GY P Sbjct: 1 MTKVRVGAVQAEPAWNDLQGGVAKTIKLIKEAGEKGINVLGFPEVWIPGYLWSMWTNSPI 60 Query: 55 DLV-----FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 D V + + + S +D +++ + G IV+G+ +D + + I G I Sbjct: 61 DNVQLFHEYMANSLARNSPEMDAIRAAVKEAGIFIVLGYSERDAGSIYMAQSFISPEGEI 120 Query: 109 IAVRDKINLPNYSE 122 + R K+ P + E Sbjct: 121 VHHRRKLK-PTHVE 133 >gi|16760585|ref|NP_456202.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141654|ref|NP_804996.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|168233228|ref|ZP_02658286.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471686|ref|ZP_03077670.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|213028193|ref|ZP_03342640.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213162966|ref|ZP_03348676.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427491|ref|ZP_03360241.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580981|ref|ZP_03362807.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213622035|ref|ZP_03374818.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646018|ref|ZP_03376071.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852610|ref|ZP_03382142.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289829377|ref|ZP_06546989.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25090772|sp|Q8Z6G6|NADE_SALTI RecName: Full=NH(3)-dependent NAD(+) synthetase gi|25299052|pir||AC0709 NH3-dependent NAD synthetase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502881|emb|CAD02044.1| NH3-dependent NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137282|gb|AAO68845.1| NH3-dependent NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194458050|gb|EDX46889.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332658|gb|EDZ19422.1| NAD+ synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 275 Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 37/216 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAITELREETGDNALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL-------- 195 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + LG P + +K P+A+L + D+ SLP Sbjct: 196 -LAALG-----CPEHLYKKVPTADL---EDDRPSLP 222 >gi|294633241|ref|ZP_06711800.1| NAD+ synthetase [Streptomyces sp. e14] gi|292831022|gb|EFF89372.1| NAD+ synthetase [Streptomyces sp. e14] Length = 276 Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 45/269 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LC--AAIAVDALGKENVQTIM-LPYKYTS--- 332 L D + +++G+SGG+DS LC A V A +E M LPY + Sbjct: 36 LADRLISTGLRSLVLGISGGVDSTTAGRLCQLAVERVRATRREATFFAMRLPYGVQADEK 95 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 Q D + L DV P D ++ + + F + NI++R R + Sbjct: 96 DAQRALDFIRADRVL--TVDVRPASDAALDAVLAGGAVFRDPNHQDFLHGNIKARQRMIV 153 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +++ T + +E G+ T +GD + PL L K R + Sbjct: 154 QYAVAGAHDGLVVGTDHAAEAVSGFFTKHGDGAADVVPLTGLTK---------RRVRAVA 204 Query: 451 SGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIKRIVENEESFINN 506 LG P ++ K+P+A+L P + D+++L Y +DD ++ E +F Sbjct: 205 QALGA-----PAELVGKTPTADLETLDPGKPDEDALGVTYDDIDDFLEGKPVAEAAFEAI 259 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 + Y R EH +RQ P+ Sbjct: 260 VRRY-----RLTEH--------KRQLPIA 275 >gi|260427539|ref|ZP_05781518.1| aliphatic nitrilase [Citreicella sp. SE45] gi|260422031|gb|EEX15282.1| aliphatic nitrilase [Citreicella sp. SE45] Length = 322 Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 22/169 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ A Q+ P + AG I + A EA +G I+F E F+ YP Sbjct: 6 IRAAAVQIAPDLSGRAGTIERVLNAIAEAADKGAQFIVFPETFVPYYPYFSFVLPPVQQG 65 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 L K + S + G +V+G +D + N+ ++ DA G ++ Sbjct: 66 APHLELMKEAVVVPSPETQAVADAARKRGVVVVLGVNERDHGSLYNAQLVFDADGTLVLK 125 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSN 158 R KI P Y HE+ + G V R R+G L C W++ N Sbjct: 126 RRKIT-PTY---HERMVWGQGDGAGLKVVETRVGRVGALAC---WEHYN 167 >gi|40890063|gb|AAR97376.1| nitrilase [uncultured organism] Length = 337 Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 61/166 (36%), Gaps = 24/166 (14%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K K+A+ Q P D+ +IAK+ EEA G LI F E FI GYP Sbjct: 7 KYKVAVVQAAPAWLDLDASIAKSIALIEEAAANGAKLIAFPEAFIPGYPWYIWLDSPAWA 66 Query: 58 FKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNI 108 + F+Q S + L+ G V+G R+ L +I G Sbjct: 67 IGRGFVQRYFDNSLAYDSPQAEKLRLAVKKAGLTAVIGLSEREGGSLYLAQWLIGPDGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI----RLGILIC 150 IA R K+ H +RT + D RLG L C Sbjct: 127 IAKRRKLR-----PTHAERTVYGEGDGSDLAVHDRPGIGRLGALCC 167 >gi|325954908|ref|YP_004238568.1| NAD+ synthetase [Weeksella virosa DSM 16922] gi|323437526|gb|ADX67990.1| NAD+ synthetase [Weeksella virosa DSM 16922] Length = 263 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 13/148 (8%) Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH--DLV 359 + S+LCA L E +P Q ++ A+ + L K+D++ DL Sbjct: 37 AVTSSLCAMTGYPLLCLE------MPIHQEESQ-VQRASIHIEWLKEKFDIISSLKVDLT 89 Query: 360 NHFFSLMSQFLQEEPS---GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGY 415 F S Q+E + N ++R+R L + ++ ++ T NK E VG+ Sbjct: 90 TTFDEFRSAVPQDENHPQLALTLANTRARLRMTTLYYFAGLNRYLVAGTGNKIEDFGVGF 149 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASW 443 T YGD +P+ DL K+QV+++A++ Sbjct: 150 FTKYGDGGVDVSPIADLLKSQVYEIAAF 177 >gi|224369301|ref|YP_002603465.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein [Desulfobacterium autotrophicum HRM2] gi|223692018|gb|ACN15301.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein [Desulfobacterium autotrophicum HRM2] Length = 266 Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 17/215 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +++A+ V G+ N+ A R+G +++LF EL ++GY K Sbjct: 1 MKPVRVALVIQKSVPGNSRVNLETCLELAGMAARRGAEIVLFPELNLTGYS-----LGKQ 55 Query: 62 FIQACSSAIDTLKSDTHDGG----AGIVVGFPRQDQEGVLNSV-VILDAGNIIAVRDKIN 116 I ++ L D ++ G +D G L S V A + V K++ Sbjct: 56 LISTATTIPGALTKALIDASIENKITLLAGMAEKDNAGHLFSTHVAAMADGTLGVYRKLH 115 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 +P EK+ F G + + GI +C D + + +GAE LF +A Sbjct: 116 IPP----PEKKVFTPGTTITTFQTDTVNFGIQVCYD-AHFPELSTRMALKGAEVLFFPHA 170 Query: 177 SP--YYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 SP KL +T + + ++ NQVG Sbjct: 171 SPRGTPQGKLDSWLRHLTARAFDNSVFVLACNQVG 205 >gi|158421696|ref|YP_001522988.1| putative amidohydrolase [Azorhizobium caulinodans ORS 571] gi|158328585|dbj|BAF86070.1| putative amidohydrolase [Azorhizobium caulinodans ORS 571] Length = 360 Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust. Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 31/213 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ A Q+ P + D G + + A EA +G D I+F E F+ YP Sbjct: 13 VRAAAVQIAPDLDDGKGTLERVLNAIAEAAGKGADFIVFPETFLPWYPYFSFIAPPVLTG 72 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR 112 E + + + D + + IV+G +D + N+ +I DA + ++ Sbjct: 73 GEHMRLYEHAVSVPGPVTDAISAAARRHAMVIVLGINERDHGSLYNAQLIFDADGTLKLK 132 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN-------ICKHL 163 + P FHE+ + G V R+G L C W++ N + +H Sbjct: 133 RRKITPT---FHERMIWGQGDGAGLQVVETKVGRVGALAC---WEHYNPLARYALMAQHE 186 Query: 164 KKQGAEFLFSLNASPYYHNKLK---KRHEIVTG 193 + A+F S+ P + ++++ + H + +G Sbjct: 187 EIHAAQFPGSM-VGPIFADQMEVTIRHHALESG 218 >gi|270296723|ref|ZP_06202922.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272710|gb|EFA18573.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 295 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 60/274 (21%), Positives = 109/274 (39%), Gaps = 42/274 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+K+ I Q D+ N+ ++ E G L++ EL S Y Sbjct: 1 MARKIKVGIIQ-QANTKDLRTNLMNLAKSIEACAAHGAQLVVLQELHNSLY--------- 50 Query: 61 SFIQACSSAIDTLKSDTHDGGAG------------IVVGFPRQDQEGVL-NSVVILDA-G 106 F Q ++ + L G +V + G+ N+ V+ + G Sbjct: 51 -FCQTENTQLFDLAEPIPGPSTGFYSELAAANDIVLVTSLFEKRAPGLYHNTAVVFERDG 109 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 +I K+++P+ ++EK F G +PI +LG+L+C D W + + Sbjct: 110 SIAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWY-PEAARLMAL 168 Query: 166 QGAEFLFSLNASPYYHN-----KLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE---- 213 +GAE L A + + K ++ + + Q H LP++ VN+VG + + Sbjct: 169 KGAEILIYPTAIGWESSDTDDEKARQLNAWIISQRGHAVANGLPVVSVNRVGHEPDPSMQ 228 Query: 214 ---LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++F G SF Q + Q + +N + E Sbjct: 229 TNGILFWGNSFVAGPQGEFLAQAGNERPENIVVE 262 >gi|226356487|ref|YP_002786227.1| NAD synthetase [Deinococcus deserti VCD115] gi|226318477|gb|ACO46473.1| putative NAD(+) synthase (NH(3)-dependent NAD(+) synthetase) [Deinococcus deserti VCD115] Length = 281 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 36/272 (13%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDAL---GKENV 321 P+ + A+ V L DY+ ++G+SGG DS L +AV+ L G+E V Sbjct: 17 PIIDPAAEVERRVTFLCDYLSSTPARGFVLGISGGQDSTLTGRLCQLAVERLRAQGREAV 76 Query: 322 QTIM-LPYKYTSPQSLEDAAACAKALGCKYD---VLPIHDLVNHFFSLMSQFLQEEPSGI 377 M LPY + ++ AA + D L I + L Sbjct: 77 FVAMRLPYGVQADEADAQAALTF----IRPDRNLTLNIQPSSDAAADAAHDALGTGLRDF 132 Query: 378 VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 V NI++R R A++ +++ T + +E G+ T YGD PL L K Sbjct: 133 VRGNIKARARMVAQYAVAGQEGLLVVGTDHAAEAVTGFFTKYGDGGVDLTPLTGLTK--- 189 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV 497 R + LG P S K P+A+L + D+ LP D++ + Sbjct: 190 ------RQGAALLQSLG-----APESTWRKVPTADL---EDDRPGLP-----DEVALGLT 230 Query: 498 ENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 + +E ++E R +E + + +KR Sbjct: 231 YEQIDAYLEGREVSEEAARRLEGMFLNTRHKR 262 >gi|205372401|ref|ZP_03225215.1| NAD synthetase [Bacillus coahuilensis m4-4] Length = 274 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 38/230 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKEN------VQTIMLPYKYTS 332 L+ Y++K++F K ++G+SGG DS L A +A++ + +EN + LPY + Sbjct: 30 LKAYLKKHSFLKGFVLGISGGQDSTLTGKLAQMAINEMNEENHTDEFKFYAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALG----CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 D C A+ + V+ I V+ + + + + E S V N ++R R Sbjct: 90 -----DEDDCQDAIEFIQPSEVLVVNIKPAVDASAATL-EAIGVELSDFVKGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ +A++L T + +E G+ T YGD P+ L K R Sbjct: 144 KAQYSIAAMRQAVVLGTDHSAEAVTGFYTKYGDGGADLVPIFRLNK---------RQGKD 194 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + LG P + K P+A+L RP D+ +L Y +DD ++ Sbjct: 195 LLKELGA-----PEHLYLKKPTADLEENRPGLPDEVALGVTYDQIDDYLE 239 >gi|326388079|ref|ZP_08209682.1| N-carbamoylputrescine amidase [Novosphingobium nitrogenifigens DSM 19370] gi|326207245|gb|EGD58059.1| N-carbamoylputrescine amidase [Novosphingobium nitrogenifigens DSM 19370] Length = 287 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 61/282 (21%), Positives = 110/282 (39%), Gaps = 33/282 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ + +A Q D+A N+ A EA G ++L ELF + Y D K Sbjct: 1 MRTVTVAATQFA-CTWDLAANLDTAEALVREAAGNGAQVVLLQELFETPYFCPDERAKHF 59 Query: 62 FIQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEGV--LNSVVILDA-GNIIAVRDKINL 117 + L + G+V+ F ++ G NS+V+LDA G + + K ++ Sbjct: 60 ALARPREGHPVLARFSALARELGVVLPFSFFEKVGSTHFNSLVMLDADGRDLGLYRKSHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF---- 172 P + EK F G + + R+G IC D W + L +GAE + Sbjct: 120 PQGPGYREKFFFAPGDTGFQVWDTAFGRIGAAICWDQW-FPECARSLALKGAELILYPTA 178 Query: 173 --------SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ----DELIFDGAS 220 ++ P++ ++ G + +P+I N++G + ++ F G+S Sbjct: 179 IGTEPLDPGFDSQPHWQRTMQ-------GHAAANMVPVIASNRIGHEVNEDADITFYGSS 231 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSD 259 F D L Q + + + + D+ Q + W D Sbjct: 232 FITDQFGALVAQAGRDTREAIVATFDLDEIAPQRAGWGLFRD 273 >gi|328953242|ref|YP_004370576.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfobacca acetoxidans DSM 11109] gi|328453566|gb|AEB09395.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfobacca acetoxidans DSM 11109] Length = 267 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 14/172 (8%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 +GD+ N +A R E A +G LI E F PPE + + + + Sbjct: 11 IGDLNYNCERAHRLVEAAAGRGAKLIALPEYFSCLGPPESIRAHAQLLD--GPLVQGFQQ 68 Query: 76 DTHDGGAGIVVG-FPRQ--DQEGVLNSVVILD-AGNIIAVRDKINL-----PNYSEFHEK 126 D G +++G P + + E + N+ V+L +G I+A KI+L P F E Sbjct: 69 QARDKGVFLLLGSIPERSAESEKIYNTAVLLQPSGEILACYRKIHLFDIDIPGRVRFRES 128 Query: 127 RTFISGYS--NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + G + + +G+ IC D+ + + + L +GAE + + A Sbjct: 129 DHILPGKEIIATALPGEEFTVGLTICYDL-RFPELFRALVSRGAEIILTPAA 179 >gi|229542569|ref|ZP_04431629.1| NAD+ synthetase [Bacillus coagulans 36D1] gi|229326989|gb|EEN92664.1| NAD+ synthetase [Bacillus coagulans 36D1] Length = 275 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 35/232 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDAL----GKE 319 P+ + + + V L+ Y++K F K ++GLSGG DS L A IA++ + G + Sbjct: 16 PVIDPKEEIRKSVDFLKSYLKKYPFLKGFVLGLSGGQDSTLTGKLAQIAINEMKEETGNQ 75 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA 379 + I + Y + +D A+ + D+ VN ++ + E +GIV Sbjct: 76 EYKFIAVRLPYGEQKDADDVELAAQFIQPDKDI-----TVNIKPAVDASEASLEKAGIVL 130 Query: 380 E-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 N ++R R + +++ ++L T + +E G+ T YGD P Sbjct: 131 SDYAKGNEKARERMKVQYSIAAMENCVVLGTDHSAENVTGFYTKYGDGGSDLVP------ 184 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 +F+L R + LG P + K+P+A+L RP D+ +L Sbjct: 185 --IFRLNK-RQGKMLLKELG-----CPERLYLKTPTADLEDDRPQLADEVAL 228 >gi|89898976|ref|YP_521447.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodoferax ferrireducens T118] gi|89343713|gb|ABD67916.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodoferax ferrireducens T118] Length = 321 Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 23/210 (10%) Query: 1 MLKKLKIAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP----E 54 M + L +A+ QL P+ +A+ +A+ G LI+F EL ++ + P E Sbjct: 1 MPRYLNVALGQLGPIQRADSRTQVVARLCELMRQAHAVGAQLIVFPELALTTFFPRWYIE 60 Query: 55 DLVFKKSFIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV----LNSVVILD-AGN 107 D SF + ++A L + G G +G+ QE N+ +++D +G Sbjct: 61 DEAEINSFFEQSMPNAATQPLFDLSKALGVGFYLGYAELAQEATGAVRYNTSILVDRSGQ 120 Query: 108 IIAVRDKINLPNYSEFH--------EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 I+A K++LP + E EKR F +G + +G+ IC D + + Sbjct: 121 IVAKYRKVHLPGHKEHEPWRRFQHLEKRYFTAGDGWEVTQAFGGVVGMAICNDR-RWAET 179 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHE 189 + + QG E + +P HN H+ Sbjct: 180 YRVMGLQGVEMVLIGYNTP-VHNAPAPEHD 208 >gi|302875929|ref|YP_003844562.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium cellulovorans 743B] gi|307689366|ref|ZP_07631812.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium cellulovorans 743B] gi|302578786|gb|ADL52798.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium cellulovorans 743B] Length = 265 Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 17/222 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--EDL--VFKK 60 +K+ +AQ++ V D + N EA Q +DL++F E+ ++G+ E++ +F K Sbjct: 1 MKLGLAQIDIVWEDKSKNKINCIELINEAKDQNVDLLVFPEMTLTGFSMNIEEIGEIFDK 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 S+ ID + I G+ + Q LN +I+ A G II+ KI+ + Sbjct: 61 ------STTIDFFRKQAISKSINIGFGYVEKKQNTALNKFIIISAQGQIISNYTKIHPFS 114 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y +E + + SG I + LIC D+ + I + + + + N + Sbjct: 115 YG--NETKHYSSGEEIQHCEVNGIIISPLICYDL-RFPEIFQACSYKSSLIIVIAN---W 168 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 ++++ ++ + I VN+VG D L+++G S Sbjct: 169 PKSRIEHWRTLLKARAIENQCYIAGVNRVGSGDNLLYNGNSM 210 >gi|146296220|ref|YP_001179991.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409796|gb|ABP66800.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 231 Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 12/212 (5%) Query: 19 IAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTH 78 + N K ++A + +DL+ F E+ ++GY E L+ ++ S ++ + Sbjct: 7 VESNFCKILYFLDKAKDERVDLVCFPEMALTGYNIE-LLQSQNLNHIISDFLEQISKKCK 65 Query: 79 DGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDP 137 + ++G P + +E +LN + VI G + DKI+ EK+ F G Sbjct: 66 EYSICSIIGHPFRQEEKLLNRATVIFPTGESLKY-DKIHPTEL----EKKIFSQGEETLV 120 Query: 138 IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN----KLKKRHEIVTG 193 F+ R GI IC D I K K+ G +F L A Y K+ K I Sbjct: 121 FEFKQKRFGIAICRD-QNFYEIFKKYKEAGCSGVFILAAHFYSPKEARWKIDKNRAIPIT 179 Query: 194 QISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + + N VG +I G S DG Sbjct: 180 RAVENGYFVFLANAVGPHLNMISLGHSLIVDG 211 >gi|126133144|ref|XP_001383097.1| Nitrilase, arylacetone-specific (Arylacetonitrilase) [Scheffersomyces stipitis CBS 6054] gi|126094922|gb|ABN65068.1| Nitrilase, arylacetone-specific (Arylacetonitrilase) [Scheffersomyces stipitis CBS 6054] Length = 327 Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 28/49 (57%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KLK+A Q PV ++ IAK+ + EEA G L+ F E F+ GYP Sbjct: 8 KLKVAAVQAAPVYLNLEATIAKSVKLIEEAAANGAKLVAFPEAFVPGYP 56 >gi|302528856|ref|ZP_07281198.1| N-carbamoylputrescine amidase [Streptomyces sp. AA4] gi|302437751|gb|EFL09567.1| N-carbamoylputrescine amidase [Streptomyces sp. AA4] Length = 280 Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 27/274 (9%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQACSSAIDT- 72 GD IA A A +A QG ++ ELF Y +D F S+ +A T Sbjct: 15 TGDKESMIANAVDAVGKAASQGAQVVCLQELFYGPYFCQVQDADF-YSYTEAIPDGPTTK 73 Query: 73 -LKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTF 129 ++ G +VV Q+Q GV N+ ++DA G + + K ++P F EK F Sbjct: 74 LMQEVAERHGVVLVVPMYEQEQPGVYYNTAAVIDADGKYLGMHRKNHIPQVKGFWEKFYF 133 Query: 130 ISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 G P+ + R+G+ IC + + L GA+ +F+ +A+ ++ R Sbjct: 134 KPGNLGYPVFDTAVGRIGVYICYER-HFPEGWRALGLAGAQIVFNPSATSRGLSEYLWRL 192 Query: 189 EIVTGQISHVHLPIIYVNQVG----GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 E +++ + + +N+VG G ++ F G S+ D + QL + +E+ + Sbjct: 193 EQPAAAVANEYY-VGTINRVGVEPLGDND--FYGQSYFVDPRGQLVGEAASDTEEEIVVR 249 Query: 245 WHYDQQLSQ-------WNYMSDDSASTMYIPLQE 271 D L + W + D T Y PL E Sbjct: 250 ---DLDLGKLAEVRDLWQFYRDRRPDT-YGPLAE 279 >gi|325096626|gb|EGC49936.1| glutamine-dependent NAD(+) synthetase [Ajellomyces capsulatus H88] Length = 697 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 33/250 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + I+ LN V D GN ++ + A G L + EL I+GY +D + Sbjct: 1 MAPLVTISTCSLNQWVLDFEGNTSRIIESIRIAKAAGARLRVGPELEITGYSCQDHFLEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I T+ I +G P + N+ + + I+ ++ K+ L Sbjct: 61 DLYLHVWQCIATIIDHPDCQDILIDIGAPIR-----YNARIHILNRRILLIKPKMWLAGD 115 Query: 121 SEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWK 155 + ++E R F I+G + PI D +GI CE+++ Sbjct: 116 ANYYEYRWFTSWAKPRYVEDYYLERIVGEITGQATVPIGDAVISTYDSAIGIETCEELFT 175 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDE 213 +N H+ G E + + S + KLK+R +++ + +Y NQ G G Sbjct: 176 PNNPGIHMGLNGVEIFTNSSGSHHELRKLKQRIDLIR-HCTRGGGIYLYANQRGEDGNGR 234 Query: 214 LIFDGASFCF 223 L FDG++ F Sbjct: 235 LYFDGSAGIF 244 >gi|322616698|gb|EFY13607.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620044|gb|EFY16917.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622354|gb|EFY19199.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627878|gb|EFY24668.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633024|gb|EFY29767.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636730|gb|EFY33433.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641244|gb|EFY37885.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645233|gb|EFY41762.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650175|gb|EFY46589.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655748|gb|EFY52050.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660074|gb|EFY56313.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665359|gb|EFY61547.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669654|gb|EFY65801.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673543|gb|EFY69645.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677469|gb|EFY73533.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679866|gb|EFY75905.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687338|gb|EFY83310.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192456|gb|EFZ77686.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198689|gb|EFZ83790.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204117|gb|EFZ89131.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208736|gb|EFZ93674.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210249|gb|EFZ95148.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217711|gb|EGA02426.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220266|gb|EGA04721.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223634|gb|EGA07946.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229514|gb|EGA13637.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232737|gb|EGA16833.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240224|gb|EGA24268.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242788|gb|EGA26809.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249104|gb|EGA33023.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254395|gb|EGA38212.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257184|gb|EGA40887.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263413|gb|EGA46944.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267092|gb|EGA50577.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271584|gb|EGA55005.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 275 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 37/216 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAIAELREETGDNALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +++ + +++ T + +E G+ T YGD NPL L K Q QL + Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQLLAV----- 198 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 LG P + +K P+A+L + D+ SLP Sbjct: 199 ----LG-----CPEHLYKKVPTADL---EDDRPSLP 222 >gi|254281677|ref|ZP_04956645.1| N-carbamoylputrescine amidase [gamma proteobacterium NOR51-B] gi|219677880|gb|EED34229.1| N-carbamoylputrescine amidase [gamma proteobacterium NOR51-B] Length = 331 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%) Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR-------DIR 144 D G+ ++V+ G +IA K+++P + ++E F G + P D Sbjct: 116 DGRGLNTAIVVSPNGELIAHTHKLHIPVTTGYYEDHYFAPGPNEAPYPVHHMAFDSGDAA 175 Query: 145 LGILICEDIWKNSNICKHLKKQGAEFLFSLNA------SPYYHNKLKKRHEIVTGQISHV 198 LG+ C D W + ++ +GAE L A P + + R IV I++ Sbjct: 176 LGLPTCWDEW-FPEVARNYALRGAEMLAYPTAIGSEPDFPDFDTEPLWRQTIVGHAIAN- 233 Query: 199 HLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 L I N+ GG+ + F G+SF D +L Q E + + Sbjct: 234 GLFIAVPNRFGGEGTVEFYGSSFIVDPFGRLLAQAPRDKEVTLVAD 279 >gi|158335383|ref|YP_001516555.1| nitrilase [Acaryochloris marina MBIC11017] gi|158305624|gb|ABW27241.1| nitrilase [Acaryochloris marina MBIC11017] Length = 332 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 20/170 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PEDLV 57 K ++ A Q++PV+ G K A A ++ + LI+F E F+ YP +V Sbjct: 5 KAVRAAAVQISPVLFSREGTTEKVLDAIASAAQEEVQLIVFPETFVPYYPYFSFVQPPVV 64 Query: 58 FKKSFIQACSSA-------IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIA 110 K+ +Q A +D + +V+G ++ + N+ +I DA + Sbjct: 65 MGKAHMQLYEEAVTVPGAVVDAISRAARSYEMVVVLGVNEREGGSLYNTQLIFDADGTLG 124 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 ++ + P Y HE+ + G V RLG L C W++ N Sbjct: 125 LKRRKITPTY---HERMVWGQGDGAGLAVLETAVGRLGALAC---WEHYN 168 >gi|149908380|ref|ZP_01897043.1| putative nitrilase [Moritella sp. PE36] gi|149808543|gb|EDM68478.1| putative nitrilase [Moritella sp. PE36] Length = 315 Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 23/166 (13%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP------------ 53 KIAI Q P V D A + +A QG +LI+F E FI GYP Sbjct: 3 KIAIIQEAPYVLDKARTVEQAANIINTVAAQGAELIVFPEAFIPGYPAWIWRLRPGGDWG 62 Query: 54 --EDLVFK--KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDA 105 E+L + K+ I CS + + + +V G +D E + N+V+ +D Sbjct: 63 VSEELHTRLLKNAIDLCSDDLKPIMAAAKSNKVTVVCGINERDSENSRTTLYNAVITIDT 122 Query: 106 -GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILIC 150 GN++ K+ +P E F G+ + I R+G LIC Sbjct: 123 QGNVVNHHRKL-MPTNPE-RMVWGFGDGHGLNVIDTPVGRIGSLIC 166 >gi|294463862|gb|ADE77454.1| unknown [Picea sitchensis] Length = 426 Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust. Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 62/255 (24%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIA-------VDAL--GKENVQ----------- 322 L DY++++ ++ LSGG DS+ AAI ++A+ G E V+ Sbjct: 32 LWDYLRRSGASGYLLPLSGGADSSSVAAIVGCMCQLVINAIAEGDEQVKSDAIRIGQYTN 91 Query: 323 ----------------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 T+ + + +S + E A +K +G + + I +V+ SL Sbjct: 92 GGFPTDSKEFAKRILYTVFMGSENSSENTRERAKQLSKEIGSWHLDVKIDTVVSSLISLF 151 Query: 367 SQFLQEEP----------SGIVAENIQSRIRGNILMALSN-----HSKA---MLLTTSNK 408 + P + +NIQ+R+R I L++ +KA ++L +SN Sbjct: 152 CSLTGKTPQYKVDGGTNAENLALQNIQARVRMVIAFLLASLMPWVQTKASFFLVLGSSNV 211 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E GY T Y S NP+ + K + + W + G L E I Sbjct: 212 DEGLRGYLTKYDCSSADINPIGSVSKQDLRRFLRW---AAVNLGYPTLVE-----IEAAP 263 Query: 469 PSAELRPHQTDQESL 483 P+AEL P +++ L Sbjct: 264 PTAELEPIRSNYSQL 278 >gi|167042206|gb|ABZ06938.1| putative tRNA methyl transferase [uncultured marine crenarchaeote HF4000_ANIW93I24] Length = 268 Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + V++ LSGG+DSAL A A LGK + ++ YK + + LE A + +G K+ V Sbjct: 17 NSVLVALSGGVDSALVAYSAYAKLGKSAI-SVTADYKTLAQEELEYAKKISLEIGIKHIV 75 Query: 353 LPIHDLVNHFF 363 + ++L N F Sbjct: 76 IEYNELANESF 86 >gi|28872036|ref|NP_794655.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|213967944|ref|ZP_03396090.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas syringae pv. tomato T1] gi|301383739|ref|ZP_07232157.1| NAD synthetase [Pseudomonas syringae pv. tomato Max13] gi|302059286|ref|ZP_07250827.1| NAD synthetase [Pseudomonas syringae pv. tomato K40] gi|302131558|ref|ZP_07257548.1| NAD synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|46396387|sp|Q87VL4|NADE_PSESM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|28855289|gb|AAO58350.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|213927287|gb|EEB60836.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas syringae pv. tomato T1] Length = 275 Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDS---ALCAAIAVDALGKENVQT------IMLPYKYTSP 333 ++D +Q +++G+SGG+DS L A AV L + T + LPY + Sbjct: 35 IKDCLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRESTGDTRYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPASSVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ + +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYQGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|307298729|ref|ZP_07578532.1| phosphoadenosine phosphosulfate reductase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915894|gb|EFN46278.1| phosphoadenosine phosphosulfate reductase [Thermotogales bacterium mesG1.Ag.4.2] Length = 338 Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 20/168 (11%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIML---PYKYTSPQSLEDAAACAKALGCKY 350 ++ + SGG+DS L A +A+ ALG++ V+ I + PY Y+ + LE A+ A+ L + Sbjct: 35 RLTVAFSGGLDSTLVAYLALHALGRDRVKLINVCFGPYSYS--RGLEIVASLAERLDLRL 92 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + P ++ + + + PS N +R+ L A+ + ++ T +N+S+ Sbjct: 93 EFTPGYEAQENVW-------KRGPSC----NRCTRLAK--LPAVRSGVLGLVATGANQSD 139 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 G + D G + PL++ K ++ + S+ N G P+ E Sbjct: 140 TWGKTGIVIKD--GFYAPLRNWTKAEIEEALSYLNIEVPKIGEAPVRE 185 >gi|307131168|ref|YP_003883184.1| NAD synthetase [Dickeya dadantii 3937] gi|306528697|gb|ADM98627.1| NAD synthetase [Dickeya dadantii 3937] Length = 274 Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 34/228 (14%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L++Y++ + F K +++GLSGG DS L + A+ + +T Y++ + P ++ Sbjct: 30 LKNYLKAHPFVKSLVLGLSGGQDSTLTGKLCQTAITELREETGKTDYQFIAVRLPHGVQA 89 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 D C A+ ++ P D + E S V N ++R R Sbjct: 90 DEQDCQDAIQFIQPDRVLTVNIKPAVDASEATLRAIGI----ELSDFVKGNEKARERMKA 145 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 +++ + +++ T + +E G+ T YGD NP+ L K R + Sbjct: 146 QYSIAGMNAGLVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQGKALL 196 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + K+P+A+L RP D+ +L Y +DD ++ Sbjct: 197 KLLG-----CPAHLYTKAPTADLEDDRPSLPDETALGVTYEKIDDYLE 239 >gi|296118673|ref|ZP_06837249.1| NAD+ synthetase [Corynebacterium ammoniagenes DSM 20306] gi|295968162|gb|EFG81411.1| NAD+ synthetase [Corynebacterium ammoniagenes DSM 20306] Length = 269 Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust. Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 37/224 (16%) Query: 286 YVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 Y++ ++G+SGG DS L A +AVD + + LP+ Q ED A Sbjct: 34 YLRTTGAAGYVLGISGGQDSTLAGKLAQLAVDQVDGAEFYALRLPHGV---QMDEDDATM 90 Query: 343 AKALGCKYDVLPIHDLV----NHFFSLMSQFLQEEPSGIVAE----NIQSRIRGNILMAL 394 A + P H L SL +Q Q + + N+++R+R A+ Sbjct: 91 AMDF-----IQPDHSLTINIEGATSSLDAQVAQSLGGHQMGDFNRGNVKARLRMIAQYAV 145 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + +++ T + +E + T +GD + PL+ L K Q Q+ + N+ Sbjct: 146 AGEKNLLVIGTDHAAENVTAFFTKWGDGAADLLPLEGLNKRQGAQMLQYLNA-------- 197 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P K P+A+L +P D+++L Y +DD ++ Sbjct: 198 ------PEETWRKVPTADLEDDKPGLPDEQALGVTYAHIDDYLE 235 >gi|302906223|ref|XP_003049431.1| hypothetical protein NECHADRAFT_95020 [Nectria haematococca mpVI 77-13-4] gi|256730366|gb|EEU43718.1| hypothetical protein NECHADRAFT_95020 [Nectria haematococca mpVI 77-13-4] Length = 322 Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 27/197 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------- 52 + +K+A Q PV D+ ++ K +R +A +G DL+ F E F+S YP Sbjct: 3 LTTPIKVAAVQAAPVSFDLDASLEKLQRLTAQAAEEGADLVAFPEAFLSAYPWRYSFDAT 62 Query: 53 -----PED----LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL 103 P + S + S A D LK + VG +D + + V+ Sbjct: 63 IGAREPRGRKWYARYAGSAVAIPSPAFDALKEAARTNNVFLHVGIIEKDGGTLYCTAVLF 122 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICK 161 D + + + +P + E+ + G + V + ++G LIC W+N Sbjct: 123 DRNGELLYKHRKLIPTAA---ERLVWGRGAGDGLKVVQTPLGKVGTLIC---WENYMPAA 176 Query: 162 H--LKKQGAEFLFSLNA 176 L +QG E + NA Sbjct: 177 RMALYQQGIEIYVAPNA 193 >gi|40890293|gb|AAR97491.1| nitrilase [uncultured organism] Length = 330 Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 20/172 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------PE 54 ++ +K A QL+PV+ G + K R E +G++ F E + YP P Sbjct: 1 MRVVKAAAVQLSPVLYSREGTVEKVVRKIHELAEEGVEFATFPETVVPYYPYFSFVQTPL 60 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHDGG-----AGIVV--GFPRQDQEGVLNSVVILDA-G 106 + +F +++ A+ T G AG+VV G +D + N+ ++ DA G Sbjct: 61 EQIFGTEYLRLLDQAVTVPSPATDAIGEAARFAGVVVSIGVNERDGGTLYNTQLLFDADG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 II R KI +Y + SG + + R+G L C W+++N Sbjct: 121 RIIQRRRKITPTHYERMIWGQGDGSGLRA--VDSKAGRIGQLAC---WEHNN 167 >gi|40890133|gb|AAR97411.1| nitrilase [uncultured organism] Length = 337 Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 22/166 (13%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE------DL 56 +K K+A+ Q PV D+ + K EEA+ QG L+ F E FI GYP + Sbjct: 6 QKYKVAVVQAAPVFLDLDATVDKTIALIEEASAQGAKLVAFPETFIPGYPWQIWLGAPAW 65 Query: 57 VFKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGN 107 + F+Q S + ++ V+G +D + + +I G Sbjct: 66 AIGRGFVQRYFDNSLGFDSPQAEKIRQAVKRAKLTAVLGLSERDGGSLYIAQWLIGPDGE 125 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVF--RDI-RLGILIC 150 IA R K+ P ++ E+ F G +D V D+ RLG L C Sbjct: 126 TIAKRRKLR-PTHA---ERTVFGEGDGSDLAVHDRADVGRLGALCC 167 >gi|107025447|ref|YP_622958.1| NAD synthetase [Burkholderia cenocepacia AU 1054] gi|116693371|ref|YP_838904.1| NAD synthetase [Burkholderia cenocepacia HI2424] gi|170737350|ref|YP_001778610.1| NAD+ synthetase [Burkholderia cenocepacia MC0-3] gi|123370980|sp|Q1BQX0|NADE_BURCA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|123467430|sp|A0B2Y5|NADE_BURCH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238688632|sp|B1K5T6|NADE_BURCC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|105894821|gb|ABF77985.1| NH(3)-dependent NAD(+) synthetase [Burkholderia cenocepacia AU 1054] gi|116651371|gb|ABK12011.1| NH(3)-dependent NAD(+) synthetase [Burkholderia cenocepacia HI2424] gi|169819538|gb|ACA94120.1| NAD+ synthetase [Burkholderia cenocepacia MC0-3] Length = 282 Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust. Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 32/243 (13%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTI 324 P + EA+ + L Y++ ++G+SGG+DS+ A ++V+ L + Sbjct: 21 PHFDAEAEIARRIDFLAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLSVERLRADGYDAR 80 Query: 325 MLPYKYTSPQSLE-DAAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPS 375 + + P ++ D +AL DV P D ++ + F Sbjct: 81 FIAMRL--PNGVQNDEEDAQRALAFVRADEVLTVDVKPAADAMLRSLVASGHAFETPAQQ 138 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 V NI++R R A++ + +++ T + +E +G+ T +GD PL L K Sbjct: 139 DFVHGNIKARERMIAQYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADILPLAGLSKR 198 Query: 436 QVFQLASWRNSHGITSGLGP---LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDD 491 +V G+ LG + +P + LE ELRP + D+ + Y +DD Sbjct: 199 RV---------RGVARALGGEELIVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDD 244 Query: 492 IIK 494 ++ Sbjct: 245 FLE 247 >gi|260825766|ref|XP_002607837.1| hypothetical protein BRAFLDRAFT_275067 [Branchiostoma floridae] gi|229293186|gb|EEN63847.1| hypothetical protein BRAFLDRAFT_275067 [Branchiostoma floridae] Length = 702 Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust. Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 29/227 (12%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A LN D GN + ++ E A + L +EL I GY D ++ Sbjct: 1 MGRKVTLATCSLNQWAMDFEGNSKRIIKSIEIAKEKKAAYRLGSELEICGYGCYDHFYEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + L VG P + + N VI I+ +R K++L N Sbjct: 61 DTLLHSYEVLAMLLQSPVTQDIICDVGMPIMHKNVLYNCRVIFLNKKILLIRPKMHLCND 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIW- 154 + E+R F I+G P I RD +G CE++W Sbjct: 121 GNYREERWFTRWMKPRQVEEYFLPRMISSITGQKTVPFGDAVISTRDTCIGSETCEELWA 180 Query: 155 -KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL 200 +S+I + L G E + + S + K R ++V + V++ Sbjct: 181 PSSSHIAQSL--DGVEIFTNASGSHFSLRKAYVRVDLVKSATAKVNI 225 >gi|22326744|ref|NP_196765.2| carbon-nitrogen hydrolase family protein [Arabidopsis thaliana] gi|19715574|gb|AAL91613.1| AT5g12040/F14F18_210 [Arabidopsis thaliana] gi|20147243|gb|AAM10335.1| AT5g12040/F14F18_210 [Arabidopsis thaliana] gi|332004371|gb|AED91754.1| omega-amidase [Arabidopsis thaliana] Length = 369 Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 19/199 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K I + QL+ V D NI+ A++A EEA +G L+L E++ S Y + I Sbjct: 87 KFNIGLCQLS-VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYSNDSFPVYAEEI 145 Query: 64 QAC--SSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKINL- 117 A +S + S+ ++G P + + + N+ + + G + A KI+L Sbjct: 146 DAGGDASPSTAMLSEVSKRLKITIIGGSIPERVGDRLYNTCCVFGSDGELKAKHRKIHLF 205 Query: 118 ----PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL- 171 P F E +T +G IV D+ R+GI IC DI + + +GA L Sbjct: 206 DIDIPGKITFMESKTLTAG-ETPTIVDTDVGRIGIGICYDI-RFQELAMIYAARGAHLLC 263 Query: 172 ----FSLNASPYYHNKLKK 186 F++ P + L++ Sbjct: 264 YPGAFNMTTGPLHWELLQR 282 >gi|21910928|ref|NP_665196.1| NAD synthetase [Streptococcus pyogenes MGAS315] gi|28895382|ref|NP_801732.1| NAD synthetase [Streptococcus pyogenes SSI-1] gi|25090726|sp|Q8K6D4|NADE_STRP3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|21905135|gb|AAM79999.1| putative NAD+ synthase [Streptococcus pyogenes MGAS315] gi|28810628|dbj|BAC63565.1| putative NAD+ synthase [Streptococcus pyogenes SSI-1] Length = 274 Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETSDQAYQFIAVRLPYGVQT 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL ++P L +N ++ Q + +G+ NI++R R Sbjct: 90 DEADAQKALAF---IMPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 198 VLGA-----DAALYEKVPTADLEDQKPGLADEVALGVTYQDIDDYLE 239 >gi|254443141|ref|ZP_05056617.1| hydrolase, carbon-nitrogen family [Verrucomicrobiae bacterium DG1235] gi|198257449|gb|EDY81757.1| hydrolase, carbon-nitrogen family [Verrucomicrobiae bacterium DG1235] Length = 260 Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 8/152 (5%) Query: 7 IAIAQLNPVVGD-IAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 + IA + P + D + ++ + E + G D+IL EL +G+ ++S + A Sbjct: 1 MKIASIQPKIADEFSDTVSGQFQLMEAVAKDGADIILLPELATTGFTGRIAKVERSLVVA 60 Query: 66 -CSSAIDTLKSDTHDGGAGIVVG---FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 D L+ + G I G FP+ + LNS++ + + DKI+ Sbjct: 61 HIDETTDRLREWSKSTGIVISFGSAVFPKDESLKPLNSMLTVFPDGTTFIDDKIHA---K 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 E +E++ F G +RD++ +IC + Sbjct: 118 EGNEEKFFAKGKRRQGFQYRDVKFDFVICREF 149 >gi|160940247|ref|ZP_02087592.1| hypothetical protein CLOBOL_05136 [Clostridium bolteae ATCC BAA-613] gi|158436827|gb|EDP14594.1| hypothetical protein CLOBOL_05136 [Clostridium bolteae ATCC BAA-613] Length = 319 Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 30/50 (60%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K KIA+ Q PV+ D KA +EA+R+G L++F ELFI GYP Sbjct: 18 KICKIAVIQAAPVMFDKDACTQKAVDLIQEASRRGAQLMVFPELFIPGYP 67 >gi|315453234|ref|YP_004073504.1| putative carbon-nitrogen hydrolase [Helicobacter felis ATCC 49179] gi|315132286|emb|CBY82914.1| putative carbon-nitrogen hydrolase [Helicobacter felis ATCC 49179] Length = 299 Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 11/124 (8%) Query: 38 MDLILFTELFISGY-----PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD 92 +DL++ EL Y P+ V +++ + + + K+ G +V + Sbjct: 42 LDLVVLPELHPYAYFCQCEDPKHFVLAQNYAEDVAFFSNLAKTY----GVVLVSSLFEKR 97 Query: 93 QEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILIC 150 EGV N+ V+ + G+++ ++ K+++P+ F+EK F G + PI LG+L+C Sbjct: 98 MEGVFSNTAVVFERDGHVVGIQRKMHIPDDPRFYEKFYFTPGDTFAPIQTSVGNLGVLVC 157 Query: 151 EDIW 154 D W Sbjct: 158 WDQW 161 >gi|307207431|gb|EFN85146.1| Probable glutamine-dependent NAD(+) synthetase [Harpegnathos saltator] Length = 831 Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 68/184 (36%), Gaps = 26/184 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A+ LN D GN + ++ +EA G EL I GY ED + Sbjct: 1 MGRTVTVAVCTLNQWAMDFDGNHRRILQSIQEAKEAGATYRSGPELEICGYSCEDHFHES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + C + +L + I VG P + N V ++ +R K+ L Sbjct: 61 DTLLHCWEVLASLLKSSVCEDMLIDVGMPVMHKNVTYNCRVAFLNQRLLLIRPKMRLCED 120 Query: 121 SEFHEKRTF--------------------ISGYSNDP-----IVFRDIRLGILICEDIWK 155 + E R F I+G S P I D +G ICE++W Sbjct: 121 GNYRESRWFSPWTKARTVEDYFLPRMISQITGQSVVPFGDAVIATIDTCVGFEICEELWH 180 Query: 156 -NSN 158 NSN Sbjct: 181 PNSN 184 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 100/265 (37%), Gaps = 65/265 (24%) Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA-------VDALGKENVQ 322 +EE A AC L DY+++ + LSGG+DS+ A I D + + ++Q Sbjct: 341 EEEIAMAPACWL--WDYLRRAYQGGFFLPLSGGVDSSASACIVYSMCQMIFDTINRGDIQ 398 Query: 323 ----------------------------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 T + + +S ++ AA A LG + + Sbjct: 399 VLADVRKIVGDSEYTPASAKELCNLILVTCYMGTENSSAETKARAAELANQLGSYHHGVV 458 Query: 355 IHDLVNHFFSLMSQFLQEEPS----------GIVAENIQSRIRGNI--------LMALSN 396 I V+ + Q + P + +N+Q+R+R I L Sbjct: 459 IDSAVSAVLGIFQQVSRVLPKFRMHGGSPRENVALQNVQARLRMVIAYLFAQLILWVRGR 518 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ-LASWRNSHGITSGLGP 455 ++L +SN E GY T Y S NP+ + K+ + + L +R +GI++ Sbjct: 519 PGGLLVLGSSNVDEALRGYLTKYDCSSADINPIGGISKSDLKKFLVYFRQKYGISA---- 574 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQ 480 IL+ P+AEL P Q Q Sbjct: 575 -----LDDILQAPPTAELEPLQEGQ 594 >gi|40890101|gb|AAR97395.1| nitrilase [uncultured organism] Length = 338 Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 22/165 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K K+A+ Q P D+ +I K+ EEA ++G LI F E FI GYP Sbjct: 7 KYKVAVVQAAPAWLDLDASIDKSIALIEEAAQKGAKLIAFPEAFIPGYPWHIWMDSPAWA 66 Query: 58 FKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 + F+Q S + L++ V+G +D + L +I G Sbjct: 67 IGRGFVQRYFDNSLAYDSPQAEKLRAAVRKAKLTAVLGLSERDGGSLYLAQWLIGPDGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DI-RLGILIC 150 IA R K+ P ++ E+ + G +D V DI RLG L C Sbjct: 127 IAKRRKLR-PTHA---ERTVYGEGDGSDLAVHNRPDIGRLGALCC 167 >gi|325970255|ref|YP_004246446.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Spirochaeta sp. Buddy] gi|324025493|gb|ADY12252.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Spirochaeta sp. Buddy] Length = 319 Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 28/186 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K A Q GD N+ E+A +G++LI+F E+ I+GY + K+ Sbjct: 1 MHNIKAASVQFRHKAGDKQANLKTITHFVEQAANKGVNLIVFPEMCITGYWHVRNLSKEE 60 Query: 62 FIQAC-----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKI 115 I S++ L+S + G I G ++G L NS V+ + + K+ Sbjct: 61 IIDLAEPVPSGSSVHYLRSLSLQYGMTIGAGLIEISEQGELYNSYVVTLSDGTVHTHRKL 120 Query: 116 NLPNYSEFHEKRTFISGY---SNDPIVF---RDIRLGILICED--IWKNSNICKHLKKQG 167 + TFIS + + VF +RLG+L C D I +N+ I L G Sbjct: 121 H-----------TFISAHMQSGSSYTVFDIPEGVRLGVLTCYDNNIVENARITALL---G 166 Query: 168 AEFLFS 173 AE L + Sbjct: 167 AEVLLA 172 >gi|323127858|gb|ADX25155.1| NAD synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 274 Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 34/241 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETSDQAYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL ++P L +N ++ Q + +G+ NI++R R Sbjct: 90 DEADAQKALAF---IMPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLQ 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESFIN 505 LG ++ EK P+A+L +P D+ +L Y +DD + K I E ++ I Sbjct: 198 VLGA-----DSALYEKVPTADLEDQKPGLADEVALGVTYQEIDDYLEGKLISEAAQATIE 252 Query: 506 N 506 Sbjct: 253 K 253 >gi|225569646|ref|ZP_03778671.1| hypothetical protein CLOHYLEM_05740 [Clostridium hylemonae DSM 15053] gi|225161116|gb|EEG73735.1| hypothetical protein CLOHYLEM_05740 [Clostridium hylemonae DSM 15053] Length = 265 Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 27/173 (15%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-------PPEDLVFK 59 + + QL G+I N A R ++ +DL+ F EL ISGY E+ F Sbjct: 1 MGLVQLAVTEGEIEKNCAHVRELALTYAKREVDLLCFPELSISGYDFHRAEGSGEEKEFY 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLP 118 + + C++AI AG+ V ++ + ++ + D G ++ KI+L Sbjct: 61 SALAKECNTAI----------LAGVCV----KEGDAYYDAACMWDEYGTLLGEYKKIHLW 106 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 + E+ F G + +R ++G+LIC D+ + I L GA+ L Sbjct: 107 D----KEREFFTHGDELVLVPYRGFQIGMLICADM-RFFEISTPLSNMGADVL 154 >gi|417382|sp|Q02068|NRL1_RHORH RecName: Full=Aliphatic nitrilase gi|216932|dbj|BAA02127.1| aliphatic nitrilase [Rhodococcus rhodochrous] Length = 383 Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 25/186 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP----------- 52 K+K+A Q PV+ D I KA EEA + G + + F E++I GYP Sbjct: 12 KVKVATVQAEPVILDADATIDKAIGFIEEAAKNGAEFLAFPEVWIPGYPYWAWIGDVKWA 71 Query: 53 PEDLV--FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 D + + ++ + + L+ +V+G+ +D S V +D G+I+ Sbjct: 72 VSDFIPKYHENSLTLGDDRMRRLQLAARQNNIALVMGYSEKDGASRYLSQVFIDQNGDIV 131 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 A R K+ H +RT + + D G + + W +H + Sbjct: 132 ANRRKLK-----PTHVERTIYGEGNGTDFLTHDFGFGRVGGLNCW------EHFQPLSKY 180 Query: 170 FLFSLN 175 ++SLN Sbjct: 181 MMYSLN 186 >gi|312140561|ref|YP_004007897.1| nad+ synthase nade [Rhodococcus equi 103S] gi|325675818|ref|ZP_08155502.1| NH(3)-dependent NAD(+) synthetase [Rhodococcus equi ATCC 33707] gi|311889900|emb|CBH49217.1| NAD+ synthase NadE [Rhodococcus equi 103S] gi|325553789|gb|EGD23467.1| NH(3)-dependent NAD(+) synthetase [Rhodococcus equi ATCC 33707] Length = 281 Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust. Identities = 63/275 (22%), Positives = 111/275 (40%), Gaps = 36/275 (13%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKE--NVQ 322 P + EA + V +++Y+ ++G+SGG DS L A +A + L E + Sbjct: 16 PTIDPEAQIRSRVQFMKEYLLSTPAKGFVLGISGGQDSTLAGRLAQLAAEELRAEGHTAE 75 Query: 323 TIMLPYKYTSPQSLEDAAACAKALG----CKYDVLPIHD-LVNHFFSLMSQFLQE--EPS 375 + + Y + EDA K + +V P D + + L + + Sbjct: 76 FVAVRLPYGAQVDEEDAQVALKFIAPDRSLAVNVKPGTDATAGEASGALREILGDGGQLR 135 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 V NI++R R I A++ +++ T + +E G+ T +GD PL L K Sbjct: 136 DFVRGNIKARERMMIQYAIAGELGYLVVGTDHAAEALTGFFTKFGDGGADLTPLTGLTKR 195 Query: 436 QVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIK 494 Q G L E+ P S K P+A+L + D+ SLP L + Sbjct: 196 Q---------------GAALLQEMGAPDSTWRKVPTADL---EDDRPSLPDEVALGVTYQ 237 Query: 495 RIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 +I + F+ ++ D+ +E + + +KR Sbjct: 238 QI----DDFLEG-RDVADDVALELERMYLNTRHKR 267 >gi|254382214|ref|ZP_04997575.1| hydrolase [Streptomyces sp. Mg1] gi|194341120|gb|EDX22086.1| hydrolase [Streptomyces sp. Mg1] Length = 280 Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 12/185 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M + ++ A+ Q GD IAK A QG +I F E+F + Y PE Sbjct: 1 MAQVVRAALVQAT-WTGDTESMIAKHEEHARRAAAQGAKIIGFQEVFNAPYFCQVQEPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRD 113 + + + + ++ + G IVV F R+ + N+ ++DA G+ + Sbjct: 60 YRWAEPVPDGPT--VQRMQDLARETGMVIVVPVFERESEGFYYNTAAVIDADGSYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G P+ + R+G+ IC D + L GA+ +F Sbjct: 118 KHHIPQVKGFWEKYYFRPGNLGWPVFDTAVGRIGVYICYDR-HFPEGWRQLGLAGAQLVF 176 Query: 173 SLNAS 177 + +A+ Sbjct: 177 NPSAT 181 >gi|309804622|ref|ZP_07698687.1| NAD+ synthase [Lactobacillus iners LactinV 09V1-c] gi|308166014|gb|EFO68232.1| NAD+ synthase [Lactobacillus iners LactinV 09V1-c] Length = 287 Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 56/268 (20%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L++Y+ KN K ++G+SGG DS L +A A+ + +T + LPY Sbjct: 31 LKEYLLKNTGLKTYVLGISGGQDSTLTGKLAQMAISELRAETGDNEYQFIAVRLPYGVQK 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAE-----NIQSRI 386 S A + DL+ + S + ++ E SGI NI++R Sbjct: 91 DASDAADAVAFQHAD--------QDLIVNIKSAVDATVKSLEESGIEISDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ +K ++ T + +E G+ T YGD + P+ L K Q Sbjct: 143 RMIVQYAIAGANKGAVIGTDHAAENISGFFTKYGDGASDILPIFRLNKRQ---------- 192 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEE 501 G L E+ P + +K+P+A+L RP D+++L Y +DD ++ Sbjct: 193 -----GKALLQELNCPKHLYQKAPTADLEEKRPALPDEQALGVSYDKIDDYLE------- 240 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E +E+L SE+KR Sbjct: 241 -----GKELAKVDAERIEYLWTRSEHKR 263 >gi|300113387|ref|YP_003759962.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nitrosococcus watsonii C-113] gi|299539324|gb|ADJ27641.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nitrosococcus watsonii C-113] Length = 293 Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 18/149 (12%) Query: 98 NSVVILDAGNIIAVR-DKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWK 155 N+ VIL+A +A R K+++P+ F+EK F G PI RLG+L+C D W Sbjct: 98 NTAVILEADGRMAGRYRKMHIPDDPGFYEKFYFTPGDLGFTPIDTSVGRLGVLVCWDQW- 156 Query: 156 NSNICKHLKKQGAEFLFSLNASPY-YHN----KLKKRHEIVTGQISHV---HLPIIYVNQ 207 + + GAE L +A + H+ K +++ +T Q H LP++ N+ Sbjct: 157 YPEAARLMALAGAELLLYPSAIGWDSHDDEAEKSRQQEAWITIQRGHAIANSLPLLASNR 216 Query: 208 VGGQDE-------LIFDGASFCFDGQQQL 229 +G + + + F G+SF Q +L Sbjct: 217 IGLEPDPSQQTPGIQFWGSSFIAGPQGEL 245 >gi|240280305|gb|EER43809.1| glutamine-dependent NAD(+) synthetase [Ajellomyces capsulatus H143] Length = 664 Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust. Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 33/250 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + I+ LN V D GN ++ + A G L + EL I+GY +D + Sbjct: 1 MAPLVTISTCSLNQWVLDFEGNTSRIIESIRIAKAAGARLRVGPELEITGYSCQDHFLEG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I T+ I +G P + N+ + + I+ ++ K+ L Sbjct: 61 DLYLHVWQCIATIIDHPDCQDILIDIGAPIR-----YNARIHILNRRILLIKPKMWLAGD 115 Query: 121 SEFHEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWK 155 + ++E R F I+G + PI D +GI CE+++ Sbjct: 116 ANYYEYRWFTSWAKPRYVEDYYLERIVGEITGQATVPIGDAVISTYDSAIGIETCEELFT 175 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDE 213 +N H+ G E + + S + KLK+R +++ + +Y NQ G G Sbjct: 176 PNNPGIHMGLNGVEIFTNSSGSHHELRKLKQRIDLIR-HCTRGGGIYLYANQRGEDGNGR 234 Query: 214 LIFDGASFCF 223 L FDG++ F Sbjct: 235 LYFDGSAGIF 244 >gi|217978149|ref|YP_002362296.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methylocella silvestris BL2] gi|217503525|gb|ACK50934.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methylocella silvestris BL2] Length = 342 Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust. Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 31/215 (14%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------- 52 ++++ A Q+ P + +AG + + A EA +G +L++F E F YP Sbjct: 5 RRVRAAAVQIAPDLDSLAGTMERVLAAIAEAAGKGAELVVFPETFAPWYPYFSFVHPPVL 64 Query: 53 --PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIA 110 E + ++ + A A + + + G +V+G +D + N+ ++ DA + Sbjct: 65 TGAEHIRLYENAVVAPGPATEAVAAAARKFGVVVVLGVNERDHGTLYNTQLVFDADGALK 124 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSN-------ICK 161 ++ + P Y HE+ + G + V R R+G L C W++ N + + Sbjct: 125 LKRRKITPTY---HERMIWGQGDGSGLKVVETRVGRVGALAC---WEHYNPLARYALMAQ 178 Query: 162 HLKKQGAEFLFSLNASPYYHNKLK---KRHEIVTG 193 H + A+F SL P + ++++ + H + +G Sbjct: 179 HEEIHIAQFPGSL-VGPIFADQIEVTIRHHALESG 212 >gi|149195069|ref|ZP_01872161.1| HYDROLASE-Predicted amidohydrolase [Caminibacter mediatlanticus TB-2] gi|149134782|gb|EDM23266.1| HYDROLASE-Predicted amidohydrolase [Caminibacter mediatlanticus TB-2] Length = 299 Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 N+ V+ D G I K ++P+ F+EK FI G +PI RLG+L+C D W Sbjct: 92 NTAVVFDKGKIAGKYRKTHIPDDPGFYEKFYFIPGDEIEPIDTSIGRLGVLVCWDQW 148 >gi|329765762|ref|ZP_08257331.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137828|gb|EGG42095.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 265 Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 N +KV+I LSGG+DSAL A A LG + + YK S + LE A +G K Sbjct: 13 NKNKVMIALSGGVDSALVAYAAFQKLGNSAI-AVTADYKTLSKEELETAKQICSEIGIKQ 71 Query: 351 DVLPIHDLVNHFF 363 ++ +L N F Sbjct: 72 ILVDYDELQNEEF 84 >gi|40890165|gb|AAR97427.1| nitrilase [uncultured organism] Length = 338 Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 22/165 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K K+A+ Q P D+ +I K EEA ++G LI F E FI GYP Sbjct: 7 KYKVAVVQAAPAWLDLDASIDKTIGLIEEAAQKGAKLIAFPEAFIPGYPWHIWMDSPAWA 66 Query: 58 FKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 + F+Q S + L++ V+G +D + L +I G Sbjct: 67 IGRGFVQRYFDNSLAYDSPQAEKLRAAVRKAKLTAVIGLSERDGGSLYLAQWLIGPDGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DI-RLGILIC 150 IA R K+ P ++ E+ + G +D V DI RLG L C Sbjct: 127 IAKRRKLR-PTHA---ERTVYGEGDGSDLAVHNRPDIGRLGALCC 167 >gi|47168348|pdb|1J31|A Chain A, Crystal Structure Of Hypothetical Protein Ph0642 From Pyrococcus Horikoshii gi|47168349|pdb|1J31|B Chain B, Crystal Structure Of Hypothetical Protein Ph0642 From Pyrococcus Horikoshii gi|47168350|pdb|1J31|C Chain C, Crystal Structure Of Hypothetical Protein Ph0642 From Pyrococcus Horikoshii gi|47168351|pdb|1J31|D Chain D, Crystal Structure Of Hypothetical Protein Ph0642 From Pyrococcus Horikoshii Length = 262 Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 14/173 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLVFKKSF 62 +K+ Q P + ++ N +KA + +EA+++G L++ ELF +GY E + VF + Sbjct: 2 VKVGYIQXEPKILELDKNYSKAEKLIKEASKEGAKLVVLPELFDTGYNFESREEVFDVAQ 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 L + G IV G + + NS V++ I KI+L Sbjct: 62 QIPEGETTTFLXELARELGLYIVAGTAEKSGNYLYNSAVVVGPRGYIGKYRKIHL----- 116 Query: 123 FHEKRTFIS----GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+ ++ F G+ I F ++G+ IC D W + L +GAE + Sbjct: 117 FYREKVFFEPGDLGFKVFDIGF--AKVGVXICFD-WFFPESARTLALKGAEII 166 >gi|329116933|ref|ZP_08245650.1| NAD+ synthase [Streptococcus parauberis NCFD 2020] gi|326907338|gb|EGE54252.1| NAD+ synthase [Streptococcus parauberis NCFD 2020] Length = 274 Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 44/233 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTS 332 L+ Y+ K++F K +++G+SGG DS L A IA+ L E + + LPY + Sbjct: 30 LKAYMLKHSFLKTLVLGISGGQDSTLAGRLAQIAIAELRAEQNDSSYQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRI 386 D + KAL ++P L VN ++ +Q E +G+V NI++R Sbjct: 90 -----DESDAQKALSF---IMPDQSLTVNIKEAVDAQVEALEQAGVVVSDFNKGNIKARQ 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R A++ + ++ T + +E + T +GD PL L K Q Sbjct: 142 RMITQYAIAGQTSGAVIGTDHAAENITAFFTKFGDGGADILPLFRLNKRQ---------- 191 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 G L E+ S+ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 192 -----GRALLKELDADKSLYEKVPTADLEENKPGIADEVALGVTYNDIDDYLE 239 >gi|257052111|ref|YP_003129944.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase [Halorhabdus utahensis DSM 12940] gi|256690874|gb|ACV11211.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase [Halorhabdus utahensis DSM 12940] Length = 276 Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAACAKALGCKYDVL 353 V++ SGG+DS++ AAIA DALG + V T P++ L++A A+ +G ++D++ Sbjct: 25 VLVAFSGGVDSSVVAAIAEDALGADAVACT--ARSETLPEAELQEAKRVAEEIGIRHDIV 82 Query: 354 PIHDLVNHFF 363 +L + F Sbjct: 83 EFSELESEAF 92 >gi|322387448|ref|ZP_08061058.1| NH(3)-dependent NAD(+) synthetase [Streptococcus infantis ATCC 700779] gi|321141977|gb|EFX37472.1| NH(3)-dependent NAD(+) synthetase [Streptococcus infantis ATCC 700779] Length = 274 Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 44/233 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP------QS 335 L+ Y++K+ F K ++G+SGG DS L +A A+ + +T YK+ + Q+ Sbjct: 30 LKKYLKKHPFLKSFVLGISGGQDSTLAGRLAQLAMEEMRAETGDDSYKFIAVRLPYGIQA 89 Query: 336 LEDAAACAKA---------LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 ED A A A + K V + V S MS F + NI++R Sbjct: 90 DEDDAQKALAFIQPDVSLVVNIKDSVDAMAAAVEATGSPMSDFNKG--------NIKARS 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R AL+ ++ T + +E G+ T +GD PL L K Q QL Sbjct: 142 RMIAQYALAGAHSGAVIGTDHAAENVTGFFTKFGDGGADILPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L E+ P++ EK P A+L +P D+ +L Y +DD ++ Sbjct: 196 ---------LKELGADPALYEKVPIADLEEEKPGLADEVALGVTYAEIDDYLE 239 >gi|312875081|ref|ZP_07735098.1| NAD+ synthase [Lactobacillus iners LEAF 2053A-b] gi|311089371|gb|EFQ47798.1| NAD+ synthase [Lactobacillus iners LEAF 2053A-b] Length = 287 Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 56/268 (20%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L++Y+ KN K ++G+SGG DS L +A A+ + +T + LPY Sbjct: 31 LKEYLLKNTGLKTYVLGISGGQDSTLTGKLAQMAISELRAETGDNEYQFIAVRLPYGVQK 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAE-----NIQSRI 386 S A + DL+ + S + ++ E SGI NI++R Sbjct: 91 DASDAADAVAFQHAD--------QDLIVNIKSAVDATVKSLEESGIEISDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ +K ++ T + +E G+ T YGD + P+ L K Q Sbjct: 143 RMIVQYAIAGANKGAVIGTDHAAENISGFFTKYGDGASDILPIFRLNKRQ---------- 192 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEE 501 G L E+ P + +K+P+A+L RP D+++L Y +DD ++ Sbjct: 193 -----GKALLQELNCPKHLYQKAPTADLEEKRPALPDEQALGVSYDKIDDYLE------- 240 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E +E+L SE+KR Sbjct: 241 -----GKELAKVDAERIEYLWTRSEHKR 263 >gi|41350130|gb|AAS00392.1| aliphatic amidase [Saccharopolyspora spinosa NRRL 18395] Length = 308 Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 13/196 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-VFKK 60 L ++ + Q V+GD+A NI A A +G DL++F E ++ GY D + Sbjct: 17 LTAPRVGLVQSGSVLGDVAANIDTAVNEVISAAERGADLLVFPECYLHGYMFADADAVHQ 76 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPN 119 + + A+ L G V+G + +G V N+ + L + K ++P Sbjct: 77 AALPLDDPALLPLHHVVRRTGVHAVLGLLERGTDGYVYNTALALGPAGTLGHYRKQHIP- 135 Query: 120 YSEFHEKRTFIS-GYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 F F++ G P VF R+G++IC D+ + + L GA+ + A Sbjct: 136 ---FMGADRFVAPGDDGAPRVFDTPFGRVGMMICFDL-RFPESARELALAGADIIVMPTA 191 Query: 177 SPYYHNKLKKRHEIVT 192 P L E+VT Sbjct: 192 WPASATLLA---ELVT 204 >gi|42573345|ref|NP_974769.1| carbon-nitrogen hydrolase family protein [Arabidopsis thaliana] gi|332004370|gb|AED91753.1| omega-amidase [Arabidopsis thaliana] Length = 294 Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 20/208 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K I + QL+ V D NI+ A++A EEA +G L+L E++ S Y + I Sbjct: 87 KFNIGLCQLS-VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYSNDSFPVYAEEI 145 Query: 64 QAC--SSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKINL- 117 A +S + S+ ++G P + + + N+ + + G + A KI+L Sbjct: 146 DAGGDASPSTAMLSEVSKRLKITIIGGSIPERVGDRLYNTCCVFGSDGELKAKHRKIHLF 205 Query: 118 ----PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL- 171 P F E +T +G + IV D+ R+GI IC DI + + +GA L Sbjct: 206 DIDIPGKITFMESKTLTAGETPT-IVDTDVGRIGIGICYDI-RFQELAMIYAARGAHLLC 263 Query: 172 ----FSLNASPYYHNKLKKRHEIVTGQI 195 F++ P H +L +R Q+ Sbjct: 264 YPGAFNMTTGP-LHWELLQRARATDNQV 290 >gi|298372699|ref|ZP_06982689.1| hydrolase, carbon-nitrogen family [Bacteroidetes oral taxon 274 str. F0058] gi|298275603|gb|EFI17154.1| hydrolase, carbon-nitrogen family [Bacteroidetes oral taxon 274 str. F0058] Length = 289 Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 21/243 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 +K+A+ Q D NI K + G +L++ +EL S Y ED+ Sbjct: 1 MKVALIQ-QTYCDDRQKNIEKLTHNIHKCASSGAELVVLSELHNSLYFCQTEDVDNFDLA 59 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNY 120 + ++ + + + G IV +G+ N+ V+L+ G++ + K+++P+ Sbjct: 60 ERLDGASTEYFGALAKNLGIVIVTSIFEHRAKGLYHNTAVVLERDGSVAGIYRKMHIPDD 119 Query: 121 SEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F+EK F G +PI LG+LIC D W + + GA+ L A + Sbjct: 120 PAFYEKFYFTPGDLGFNPIRTSAGNLGVLICWDQWY-PEAARLMALNGADVLIYPTAIGW 178 Query: 180 --------YHNKLKKRHEIVTGQISHVHLPIIYVNQVG------GQDELIFDGASFCFDG 225 +L + G +LP+I N+ G G D + F G SF + Sbjct: 179 DTKDTAEEQQRQLDAWMAVQRGHAVANNLPVITCNRTGYELSKNGNDGIKFWGHSFVYGA 238 Query: 226 QQQ 228 Q + Sbjct: 239 QGE 241 >gi|225024180|ref|ZP_03713372.1| hypothetical protein EIKCOROL_01050 [Eikenella corrodens ATCC 23834] gi|224943205|gb|EEG24414.1| hypothetical protein EIKCOROL_01050 [Eikenella corrodens ATCC 23834] Length = 267 Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 52/208 (25%) Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 + SALCA +D L ++LP + + Q L+ A I DL + Sbjct: 38 AVVSALCAHSGLDVL------CVVLPIRQQADQ-LQRANE------------HIADLQHR 78 Query: 362 FFSLMSQFLQEEPS----------------GIVAENIQSRIRGNILMALSNHSKAMLLTT 405 F ++ SQ L P+ + N +SR+R L + ++ T Sbjct: 79 FINVRSQTLDLTPTFEQFERSVADTAAANKNLAMANTRSRLRMAALYYYGQINGLLVAGT 138 Query: 406 SNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 NK E VG+ T YGD +P+ DL KTQV+ LA + P+I Sbjct: 139 GNKVEDFGVGFFTKYGDGGVDLSPIGDLLKTQVYTLAE--------------ALAVLPAI 184 Query: 465 LEKSPSAEL-RPHQTDQESL-PPYPILD 490 + +P+ L +TD++ + YP L+ Sbjct: 185 RQAAPTDGLWDEERTDEQQMGASYPELE 212 >gi|158425507|ref|YP_001526799.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Azorhizobium caulinodans ORS 571] gi|158332396|dbj|BAF89881.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Azorhizobium caulinodans ORS 571] Length = 584 Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 18/122 (14%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAK----ARRAREEANRQGMDLILFTELFISGYPPEDLVF 58 + ++A+AQ P G IA N+++ A +AR E +G DL++F EL +SG Sbjct: 290 RASRVAVAQFAPGEG-IADNLSRICAFAVQARTE---EGADLVVFPELALSG-------L 338 Query: 59 KKSFIQACSS---AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 ++A SS A L + + G +VVGF + +G+ NS +L ++A+ K+ Sbjct: 339 SDPAVRALSSDDPAFMRLLNLSARLGLHMVVGFAERAADGLYNSAALLGPEGLVAIHRKL 398 Query: 116 NL 117 +L Sbjct: 399 HL 400 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 15/193 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + + +A Q P + + NI + E+A R G LI+ E+ +GY D Sbjct: 1 MSETITVATVQFEPTLFEKERNITRLLALCEQAARAGAKLIVTPEMGTTGYCWFDRAEVA 60 Query: 61 SFIQAC-SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLP 118 +++ + + + G IV+G P D + + NS V++ ++ K Sbjct: 61 GQVESVPGPTTERFAALAREHGCWIVIGMPEVDADDIYFNSAVLIGPDGVVGTHRK---- 116 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAE-------F 170 ++ E + +G + I R+G+LIC DI + + QGA+ + Sbjct: 117 SHPYISEPKWSAAGDLGHQVFETPIGRIGLLICMDI-HFIETARLMAVQGADVICHISNW 175 Query: 171 LFSLNASPYYHNK 183 L +PY+ ++ Sbjct: 176 LAERTPAPYWISR 188 >gi|182435026|ref|YP_001822745.1| putative hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463542|dbj|BAG18062.1| putative hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 280 Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 12/185 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y PE Sbjct: 1 MSHVVRAALVQAT-WTGDTESMIAKHEEHAREAARQGAGIIGFQEVFNAPYFCQVQEPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRD 113 + + + + ++ + G IVV +Q G N+ ++DA G+ + Sbjct: 60 YRWAEPVPDGPT--VRRMQDLARETGMVIVVPVFEIEQSGFYYNTAAVIDADGSYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G + P+ + ++G+ IC D + L GA+ ++ Sbjct: 118 KHHIPQVKGFWEKYYFKPGNAGWPVFDTAVGKVGVYICYDR-HFPEGWRQLGLGGAQLVY 176 Query: 173 SLNAS 177 + +A+ Sbjct: 177 NPSAT 181 >gi|126179843|ref|YP_001047808.1| GMP synthase subunit B [Methanoculleus marisnigri JR1] gi|166215314|sp|A3CWS6|GUAAB_METMJ RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B; AltName: Full=GMP synthetase gi|125862637|gb|ABN57826.1| GMP synthase (glutamine-hydrolyzing) [Methanoculleus marisnigri JR1] Length = 305 Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 17/174 (9%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 + V +RD ++ KV++ LSGG+DS++CAA+A A+G + ++P + Sbjct: 9 DQAVREIRDAAGED---KVVMALSGGVDSSVCAALATRAIGDQ-----LVPIYVDTGLMR 60 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQ------SRIRG 388 + ++L + L + D + FF ++ + +E+ I A+ I+ R Sbjct: 61 KGETDRIRSLFADAN-LRVVDAADEFFEALAGIVDPEEKRKAIGAKFIRIFEREAKRTGA 119 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 +L+ + + + KS +VG L + G PL DLYK +V ++A Sbjct: 120 TMLLQGTIYPDRIESEGGIKSHHNVGGMPLDIEFKGVIEPLADLYKDEVREVAG 173 >gi|152988066|ref|YP_001346927.1| hypothetical protein PSPA7_1543 [Pseudomonas aeruginosa PA7] gi|150963224|gb|ABR85249.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 271 Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 24/233 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+ GD A N+ +A A +L++F E ++G+P ED I Sbjct: 1 MKVELVQIAGRDGDTAHNLERALAAIAGCAAD-TELVVFPETHLTGFPSED------NIA 53 Query: 65 ACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 A + +D ++ + + +G D N+ V++ I K +L Sbjct: 54 ALAEPLDGPTVRAVQRAARERNVSVAIGIAEADAGRYYNTTVLIAPDGIALKYRKTHL-- 111 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS-- 177 ++ F G ++ IR+G+L+C DI + + L + GAE + N + Sbjct: 112 --WASDRGIFTPGDRYATTLWNGIRVGLLVCFDI-EFPESARALGQLGAELIIVTNGNMD 168 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFDGQQQL 229 PY R I+ + + ++ VN+VG G L+F G S D QL Sbjct: 169 PYGPT---HRTAIMARAMENQAYAVM-VNRVGHGDGGLVFAGGSAVVDPYGQL 217 >gi|242042031|ref|XP_002468410.1| hypothetical protein SORBIDRAFT_01g045480 [Sorghum bicolor] gi|241922264|gb|EER95408.1| hypothetical protein SORBIDRAFT_01g045480 [Sorghum bicolor] Length = 284 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 20/194 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L K K+A+ QL+ V D + NIA AR A E+A G L+L E++ Y + Sbjct: 69 LSKFKVALCQLS-VTADKSRNIAHARAAIEKAASDGAKLVLLPEIWNGPYSNDSFPEYAE 127 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+A A + S + + + +G + + D I++P Sbjct: 128 DIEAGGDAAPSF-SMMSEVARSLQITLVDGQLKGKHRKIHLFD----------IDIPGKI 176 Query: 122 EFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL-----FSLN 175 F E +T +G S +V D+ R+GI IC DI + + +GA L F++ Sbjct: 177 TFKESKTLTAGQSPT-VVDTDVGRIGIGICYDI-RFQELAMLYAARGAHLLCYPGAFNMT 234 Query: 176 ASPYYHNKLKKRHE 189 P + L++ + Sbjct: 235 TGPLHWELLQRARQ 248 >gi|303311171|ref|XP_003065597.1| hydrolase, carbon-nitrogen family protein [Coccidioides posadasii C735 delta SOWgp] gi|240105259|gb|EER23452.1| hydrolase, carbon-nitrogen family protein [Coccidioides posadasii C735 delta SOWgp] gi|320039415|gb|EFW21349.1| nitrilase [Coccidioides posadasii str. Silveira] Length = 298 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE------DL 56 K LK+A+ QL D A N+A+AR EA R G LI+ E F S Y + + Sbjct: 8 KPLKLALVQLA-TGSDKAVNLARARSKVLEAARSGASLIVLPECFNSPYGTQFFPHYAET 66 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEGVLNSVVILDAGNIIAVR 112 + S + TL S + A +V G + + ++ S+V G++IA Sbjct: 67 LLPSPPTTEQSPSFHTLSSIAAEAKAYLVGGSIPEYVPETKQYFNTSLVFSPTGSLIATH 126 Query: 113 DK-----INLPNYSEFHEKRTFISGYSNDPIVFRDI----RLGILICEDI 153 K I++P +F E +G + I D+ ++G+ IC DI Sbjct: 127 RKTHLFDIDIPGKIKFKESEVLSAG---NKITIVDLPEYGKVGLAICYDI 173 >gi|147920648|ref|YP_685553.1| hypothetical protein RCIX867 [uncultured methanogenic archaeon RC-I] gi|110620949|emb|CAJ36227.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 276 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++ SGG+DS L AVD LG + V + T + ++DAA AK LG ++ ++ Sbjct: 27 VLVAFSGGVDSTLLLKCAVDTLGADKVAAATAISEITHREDVDDAAMIAKDLGVRHIIIR 86 Query: 355 IHDLVNHFF 363 ++ N F Sbjct: 87 SDEVENADF 95 >gi|259501102|ref|ZP_05744004.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus iners DSM 13335] gi|302190450|ref|ZP_07266704.1| NAD synthetase [Lactobacillus iners AB-1] gi|325913302|ref|ZP_08175670.1| NAD+ synthase [Lactobacillus iners UPII 60-B] gi|259167796|gb|EEW52291.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus iners DSM 13335] gi|325477405|gb|EGC80549.1| NAD+ synthase [Lactobacillus iners UPII 60-B] Length = 278 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 56/268 (20%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L++Y+ KN K ++G+SGG DS L +A A+ + +T + LPY Sbjct: 31 LKEYLLKNTGLKTYVLGISGGQDSTLTGKLAQMAISELRAETGDNEYQFIAVRLPYGVQK 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAE-----NIQSRI 386 S A + DL+ + S + ++ E SGI NI++R Sbjct: 91 DASDAADAVAFQHAD--------QDLIVNIKSAVDATVKSLEESGIEISDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ +K ++ T + +E G+ T YGD + P+ L K Q Sbjct: 143 RMIVQYAIAGANKGAVIGTDHAAENISGFFTKYGDGASDILPIFRLNKRQ---------- 192 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEE 501 G L E+ P + +K+P+A+L RP D+++L Y +DD ++ Sbjct: 193 -----GKALLQELNCPKHLYQKAPTADLEEKRPALPDEQALGVSYDKIDDYLE------- 240 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E +E+L SE+KR Sbjct: 241 -----GKELAKVDAERIEYLWTRSEHKR 263 >gi|312215901|emb|CBX95853.1| similar to nitrilase [Leptosphaeria maculans] Length = 323 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 29/50 (58%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K LK+A Q +PV D+ G+ KA +A +G D+I F E FI GYP Sbjct: 4 KTLKLAAVQASPVFMDLTGSTKKACDLIRQAGAEGADVIGFPESFIPGYP 53 >gi|295108843|emb|CBL22796.1| Predicted amidohydrolase [Ruminococcus obeum A2-162] Length = 274 Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 12/179 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K + A Q+ P V D NI R E+ +D ++ E+F Y E F + Sbjct: 1 MNKFRAAAIQM-PTVEDKMENIKAVRHYLEQIKAHKVDFVVLPEMFCCPYQTEK--FPEY 57 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEG-VLNSVVILDAGNIIAVRDK----- 114 + S L + + +V G P +D EG V N+ I D + + + Sbjct: 58 AEEEGGSVWKALSAYAKEYNIYLVAGSVPEKDDEGRVYNTCYIFDRQGVQIGKHRKTHLF 117 Query: 115 -INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 I++ F E T +G S R+G++IC DI + + + GA +F Sbjct: 118 DIDIKGGQSFKESDTLTAGNSGTVFETEFGRMGVMICFDI-RFPEFARMMVNDGARMIF 175 >gi|313632843|gb|EFR99794.1| carbon-nitrogen family hydrolase [Listeria seeligeri FSL N1-067] Length = 298 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------PED 55 LKIA+ Q + N+ A+ +EA QG DL+LF E++ +GY P D Sbjct: 2 LKIALVQKKAMANQKNTNLKLAQLYIKEAANQGADLVLFPEMWSNGYAAPFAEAFDNPLD 61 Query: 56 LVFKKSF-------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 ++K + S + L+ G+ + ++ + N+ +I+D G Sbjct: 62 PNYEKERTSWLEEGVTTSSDYVRALRQRAKAYHVGVCATYLSKNGKKNQNTAIIIDRNGE 121 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 II K++ +F + SG F +++G++IC D + + L +G Sbjct: 122 IILDYAKVHT---CDFSLESLLQSGTEFPVCEFDGVKIGVMICFDR-EFPESARTLMLKG 177 Query: 168 AEFLFSLNA---SPYYHNKLKKR 187 AE + NA +P N+L R Sbjct: 178 AEIILVPNACDMNPARINQLSTR 200 >gi|270292319|ref|ZP_06198530.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sp. M143] gi|270278298|gb|EFA24144.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sp. M143] Length = 274 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 44/261 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRLSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALG-CKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 I LPY + D A KAL + DV I ++ ++ + E Sbjct: 75 SYQFIAIRLPYGVQA-----DEADAQKALAFIQPDVSLIVNIKESADAMTAAV--EATGS 127 Query: 377 IVAE----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 V++ NI++R R AL+ ++ T + +E G+ T +GD PL L Sbjct: 128 PVSDFNKGNIKARSRMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRL 187 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 K Q QL L E+ P++ EK P A+L +P D+ +L Y Sbjct: 188 NKRQGKQL---------------LKELGADPALYEKIPIADLEEDKPGIADEVALGVTYE 232 Query: 488 ILDDII--KRIVENEESFINN 506 +DD + K I ++ I N Sbjct: 233 EIDDYLEGKTISPEAQAIIEN 253 >gi|170690615|ref|ZP_02881782.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia graminis C4D1M] gi|170145050|gb|EDT13211.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia graminis C4D1M] Length = 296 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 7/155 (4%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++L IA Q+ P +G N+A+ R E A G L++ EL +GY D S Sbjct: 12 EELVIACVQMEPHIGAKRANVARLIRHVETAAGNGASLVVLPELATTGYVFADRDEAFSL 71 Query: 63 IQACSSA-IDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + L ++T G IV G + + + NS + I + K++L N Sbjct: 72 AEGLPDGETSQLFAETAQRLGVHIVTGIAERAGKRLYNSALFTGPSGHIGIYRKLHLWN- 130 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIW 154 +E R F G P+ + R+ I IC D W Sbjct: 131 ---NENRFFEPGDRGVPVFGTPLGRIAIAICYDGW 162 >gi|157373665|ref|YP_001472265.1| Nitrilase [Shewanella sediminis HAW-EB3] gi|157316039|gb|ABV35137.1| Nitrilase [Shewanella sediminis HAW-EB3] Length = 317 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 29/47 (61%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIAI Q +P++ D I KA EEA G +L++F E FI+GYP Sbjct: 9 KIAIVQESPILLDRDATIEKAVTLIEEAASAGAELVVFPEAFIAGYP 55 >gi|325686933|gb|EGD28957.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK72] Length = 274 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLKKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A K DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-IKPDVSLTVN--IKESADAMTKAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LATLGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|116073367|ref|ZP_01470629.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. RS9916] gi|116068672|gb|EAU74424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. RS9916] Length = 520 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAAACAKALGCKY 350 H+V +GLSGG+DS+L AA+ V+A + T+ L + L DAA + LG + Sbjct: 156 HRVAVGLSGGVDSSLTAALLVEAGWEVEGLTLWLMSGKGACCAEGLVDAAGICEQLGVPH 215 Query: 351 DVLPIHDLVNHFFSLMSQFL 370 V+ D HF + QFL Sbjct: 216 HVV---DFREHFKEQIVQFL 232 >gi|310767509|gb|ADP12459.1| NAD synthetase [Erwinia sp. Ejp617] Length = 275 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 59/274 (21%), Positives = 112/274 (40%), Gaps = 36/274 (13%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + V L+ Y+++ F +++G+SGG DS L + A+ + +T Sbjct: 15 PVIDAGEEIRTSVAFLKSYLKRYPFLTSLVLGISGGQDSTLTGKLCQMAISELRNETGNG 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---SGIVA 379 Y++ + P ++ D C A+ I + Q L+E S + Sbjct: 75 SYQFIAVRLPHGVQADEQDCQDAIAFIQPDRVITVNIKAAVQASEQALREAGITLSDFIR 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N ++R R +++ + +++ T + +E G+ T YGD NP+ L K Q Q Sbjct: 135 GNEKARERMKAQYSIAGMTAGVVVGTDHAAEAVTGFFTKYGDGGSDINPIFRLNKGQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLPPYPILDDIIKRI 496 L S P + K P+A+L RP D+ +L + ++I R Sbjct: 195 LLKALGS--------------PEHLWLKHPTADLEDDRPGLQDEVAL---GVTYEMIDRY 237 Query: 497 VENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 ++ E + + +E+ +E+KRR Sbjct: 238 LQGE--------SIDPAAAKIIENWYVKTEHKRR 263 >gi|116250432|ref|YP_766270.1| nitrilase [Rhizobium leguminosarum bv. viciae 3841] gi|115255080|emb|CAK06154.1| nitrilase (ec 3.5.5.7) [Rhizobium leguminosarum bv. viciae 3841] Length = 348 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 22/169 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 +++A AQ+ P + +A+ A EA +G +LI+F E F+ YP Sbjct: 7 VRVAAAQIAPDLTSREKTLARVLDAIREAAAKGAELIVFPETFVPWYPYFSFVLPPVLSG 66 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 E + + + S+A D + + + G + +G +D + N+ ++ DA G +I Sbjct: 67 KEHVRLYEEAVTVPSAATDAVSAAAREHGIVVALGVNERDYGSLYNTQLLFDADGTLILK 126 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 R KI FHE+ + G ++ V RLG L C W++ N Sbjct: 127 RRKIT----PTFHERMIWGQGDASGLKVVDSAVGRLGALAC---WEHYN 168 >gi|330873764|gb|EGH07913.1| NAD synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 275 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDS---ALCAAIAVDALGKENVQT------IMLPYKYTSP 333 ++D +Q +++G+SGG+DS L A AV L + T + LPY + Sbjct: 35 IKDCLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRESTGDTRYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPASSVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ + +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYQGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKDQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|158423641|ref|YP_001524933.1| N-carbamyl-D-amino acid amidohydrolase [Azorhizobium caulinodans ORS 571] gi|158330530|dbj|BAF88015.1| N-carbamyl-D-amino acid amidohydrolase [Azorhizobium caulinodans ORS 571] Length = 311 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 35/225 (15%) Query: 1 MLKKLKIAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP----E 54 M + L +A AQL P+ A + + +A G DL++F EL ++ + P E Sbjct: 1 MSRILTVAAAQLGPIQRADTRASVVRRLCDLLRQAAGHGCDLVVFPELALTTFFPRWYTE 60 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHDGG--AGIVVGFPRQ-DQEGVL---NSVVILD-AGN 107 D +F + + +T G G +G+ +++G L N+ VI+D +G Sbjct: 61 DQTEIDAFFETALPSAETAPLFALAGALKVGFCLGYAELVEEDGRLRRFNTSVIVDKSGE 120 Query: 108 IIAVRDKINLPNYSEFH--------EKRTFISGYSNDPIVFRDIR---LGILICED-IWK 155 I+ KI+LP ++E EKR F G N P+ R I LG+ IC D W Sbjct: 121 IVLKYRKIHLPGHAEHEPWRAFQHLEKRYFEVGNLNWPV--RRIMGGVLGMAICNDRRWP 178 Query: 156 NSNICKHLKKQGAEFLFSLNASPYY------HNKLKKRHEIVTGQ 194 + LK G E + +P + H++L + H ++ Q Sbjct: 179 ETYRVMGLK--GVEMVLIGYNTPRHNPPAPDHDRLSEFHNQLSMQ 221 >gi|254526839|ref|ZP_05138891.1| hypothetical protein P9202_1492 [Prochlorococcus marinus str. MIT 9202] gi|221538263|gb|EEE40716.1| hypothetical protein P9202_1492 [Prochlorococcus marinus str. MIT 9202] Length = 275 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 14/166 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N +A E A+R+G +LI E F G E L + C++ + T+ Sbjct: 16 NVEANFVEAEEQIELASRRGAELIGLPENFAFLGEDDEKLRLASELSEKCTNFLKTMSQR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P D N S + G ++A DKI +LP+ + + E T + Sbjct: 76 YQVFLLGGGYPVPAGDDSHTFNRSALFGKDGQVLAKYDKIHLFDVDLPDGNLYKESSTIL 135 Query: 131 SGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG P+V D+ ++G+ IC D+ + + ++L GAE + Sbjct: 136 SGAEYPPVV--DVPGLCKIGLSICYDV-RFPELYRYLSSNGAELIM 178 >gi|118471653|ref|YP_887306.1| carbon-nitrogen hydrolase family protein [Mycobacterium smegmatis str. MC2 155] gi|118172940|gb|ABK73836.1| carbon-nitrogen hydrolase family protein [Mycobacterium smegmatis str. MC2 155] Length = 299 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 20/229 (8%) Query: 6 KIAIAQLNPVVG--DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++A+ Q NP VG ++ N ++A G +LI+ EL +GY E + Sbjct: 13 RVAVVQFNPQVGVENLKANSEAVYERLQQAVAGGANLIVLPELATTGYTFESREEAYAHA 72 Query: 64 QACSSAIDTLK----SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + S + HD IV P D + ++ V++ I K +L N Sbjct: 73 EPVPSGATVTGWAEFAAAHD--VYIVGCLPELDGVELFDTAVLVGPEGYIGKYRKTHLWN 130 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL-----FS 173 EK F G P+ I R+G+L+C DIW + + +QGA+ + + Sbjct: 131 ----EEKLFFSPGDLGYPVFHTRIGRIGLLVCWDIWF-PETARIVAQQGADIICIPTGWV 185 Query: 174 LNASPYYHNKLKKRHEIVTGQISHV-HLPIIYVNQVGGQDELIFDGASF 221 P Y + +T +HV ++ I +++G + F G S Sbjct: 186 WTPPPLYDDSGTCMAAYLTMTAAHVNNVFIATADRIGTERTSGFMGNSL 234 >gi|332687043|ref|YP_004456817.1| NAD synthetase [Melissococcus plutonius ATCC 35311] gi|332371052|dbj|BAK22008.1| NAD synthetase [Melissococcus plutonius ATCC 35311] Length = 275 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 52/245 (21%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALC---AAIAVDALGKENVQT------IMLPYKYTS 332 L+ Y+ KN+F ++G+SGG DS L A +A++ + KE + I LPY Sbjct: 31 LKTYLYKNSFLQTFVLGISGGQDSTLAGCLAQLAMEEMRKETQNSHYQFIAIRLPY---G 87 Query: 333 PQSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NI 382 Q+ E+ A A A D+ P D SL+ +GI+ NI Sbjct: 88 TQADEEDAKQAIAFIQPDRSLCIDIKPAVD--AEIASLIE-------AGIIINDFNKGNI 138 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R R A++ + ++ T + +E G+ T YGD P+ L K Q Sbjct: 139 KARQRMITQYAVAGETVGAVIGTDHAAESLTGFFTKYGDGGTDLLPIFRLNKRQ------ 192 Query: 443 WRNSHGITSGLGPLTEV-IPPSILEKSPSAELRPHQ---TDQESLP-PYPILDDIIKRIV 497 G L E+ P S+ K P+A+L +Q D+ +L Y +DD ++ + Sbjct: 193 ---------GKALLKELQAPASLYNKIPTADLEDNQPLLADETALGITYETIDDYLEGKI 243 Query: 498 ENEES 502 +E++ Sbjct: 244 VSEKA 248 >gi|315613476|ref|ZP_07888384.1| NAD+ synthetase [Streptococcus sanguinis ATCC 49296] gi|315314472|gb|EFU62516.1| NAD+ synthetase [Streptococcus sanguinis ATCC 49296] Length = 274 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 40/259 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + LPY + D A KAL + + + M+ ++ S + Sbjct: 75 SYQFIAVRLPYGVQA-----DEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPV 129 Query: 378 V---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 NI++R R AL+ ++ T + +E G+ T +GD PL L K Sbjct: 130 SDFNKGNIKARSRMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNK 189 Query: 435 TQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 Q QL L E+ P++ EK P+A+L +P D+ +L Y + Sbjct: 190 RQGKQL---------------LKELGADPALYEKIPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDII--KRIVENEESFINN 506 DD + K I ++ I N Sbjct: 235 DDYLEGKSISPEAQATIEN 253 >gi|209547055|ref|YP_002278973.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538299|gb|ACI58233.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 340 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 22/164 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK----- 59 K A A + PV + + KA EA R G L++F+E F+ G+P ++ Sbjct: 6 FKAAAAHVAPVYLEPVASAEKACSVIAEAARNGASLVVFSESFLPGFPVWAALYPPIQSH 65 Query: 60 ---KSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQE---GVLNS-VVILDAGNI 108 K F+ A ID ++ G + +GF ++ G+ NS V+I D G I Sbjct: 66 GHFKRFLNASVYMDGPEIDRVRKAASKSGVFVSIGFSERNPASVGGLWNSNVLISDTGEI 125 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIV--FRDIRLGILIC 150 + K+ + F EK + G +V R R+G LIC Sbjct: 126 LIHHRKL----VATFFEKLVWDPGDGAGLVVAETRIGRIGGLIC 165 >gi|157813158|gb|ABV81324.1| putative GMP synthetase [Cydia pomonella] Length = 194 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 5/99 (5%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + L+ ACV +RD V +N KV++ +SGG+DS +CAA+ Sbjct: 12 NFLFDIAGMSRSFTLRSRR---EACVQYIRDAVGDSN--KVLVLVSGGVDSTVCAALLRT 66 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + C + LG + V+ Sbjct: 67 ALREDQVIALHIDNGFMRKNESSKVERCLRELGVRLHVV 105 >gi|307106321|gb|EFN54567.1| hypothetical protein CHLNCDRAFT_58195 [Chlorella variabilis] Length = 613 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 21/206 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++K+A+ QL V D N+ AR A EEA G DL++ E++ Y + + Sbjct: 82 QIKVALCQL-AVGADKQANLTTARSAIEEAATAGADLVVLPEMWNCPYSNDSFPTYAEDV 140 Query: 64 QACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA--GNIIAVRDKINL-- 117 +A S ++ S ++VG P + G L + + G ++ K++L Sbjct: 141 EAGDSPSTSMLSAAAAANRVVLVGGSIPERANGGRLYNTCFVYGRDGRLLGRHRKVHLFD 200 Query: 118 ---PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL--- 171 P F E T G + RLGI IC DI + + +G + + Sbjct: 201 IDIPGKITFKESLTLTPGEGLTVVG----RLGIGICYDI-RFPELALLYAARGVQLIVYP 255 Query: 172 --FSLNASPYYHNKLKKRHEIVTGQI 195 F++ P H +L +R V GQ+ Sbjct: 256 GAFNMTTGP-VHWELLQRARAVDGQL 280 >gi|284048976|ref|YP_003399315.1| exsB protein [Acidaminococcus fermentans DSM 20731] gi|283953197|gb|ADB48000.1| exsB protein [Acidaminococcus fermentans DSM 20731] Length = 232 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 26/154 (16%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++ SGG+DS C ++AV+ GKENV T+ + Y + LE CA+ + +Y L Sbjct: 4 KALVLSSGGVDSTTCVSVAVEEFGKENVSTVSIFYGQKHRKELE----CARKVA-EYYGL 58 Query: 354 PIHDL-VNHFF-----SLM----SQFLQEEPSGIVAENIQSRIRG-----NILMALSNHS 398 P ++L ++ F SL+ + + E +AEN + ++ N LM + S Sbjct: 59 PHYELDLSKIFQYSNCSLLDHSTEEIVHESYEQQIAENGEGKVSTYVPFRNGLMLSAVAS 118 Query: 399 KAMLLTTSNKSEISVG------YGTLYGDMSGGF 426 AM + + I +G G Y D S F Sbjct: 119 LAMSIYEKDDVSIFIGAHADDAAGNAYADCSEAF 152 >gi|21672457|ref|NP_660524.1| NAD synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25090731|sp|Q8K9W7|NADE_BUCAP RecName: Full=NH(3)-dependent NAD(+) synthetase gi|21623071|gb|AAM67735.1| NH(3)-dependent NAD(+) synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 268 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 65/289 (22%), Positives = 117/289 (40%), Gaps = 54/289 (18%) Query: 265 MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENV 321 + IP +E E N + R ++ + +I+G+SGG DS L + ++ L KE Sbjct: 16 LIIPKKEIE---NRIQILKRYLIENTHLKTLIVGISGGQDSTLTGKLCQLSIQELRKEKK 72 Query: 322 Q------TIMLPYKYTSPQSLEDAAACAKALGCK-----YDVLPIHDLVNHFFSLMSQFL 370 + + LPY D C A+ + + + ++N SL Q + Sbjct: 73 EKSYQFIALRLPYGVQI-----DEKDCRDAINFINPDQIFTINIKNAVLNSERSLKKQGI 127 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 Q S + N ++R R + + + + +++ T N +E G+ T YGD N + Sbjct: 128 Q--ISDYIKGNEKARERMKVQYSFAAITNGLVVGTGNAAENVTGFFTKYGDNGTDVNLIS 185 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PY 486 L K Q L N P + K P+A+L +P + D+ +L Y Sbjct: 186 KLNKRQGKFLLKELNC--------------PKHLYLKKPTADLEDEKPQKEDEVALGIKY 231 Query: 487 PILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 I+DD ++ ++ N + +E L +E+KR+ +G Sbjct: 232 NIIDDYLE------------GKKVNSLNKQIIERLYLTTEHKRKIINLG 268 >gi|326775542|ref|ZP_08234807.1| N-carbamoylputrescine amidase [Streptomyces cf. griseus XylebKG-1] gi|326655875|gb|EGE40721.1| N-carbamoylputrescine amidase [Streptomyces cf. griseus XylebKG-1] Length = 280 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 12/185 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y PE Sbjct: 1 MSHVVRAALVQAT-WTGDTESMIAKHEEHAREAARQGARIIGFQEVFNAPYFCQVQEPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRD 113 + + + + ++ + G IVV +Q G N+ ++DA G+ + Sbjct: 60 YRWAEPVPDGPT--VRRMQDLARETGMVIVVPVFEIEQSGFYYNTAAVIDADGSYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G + P+ + ++G+ IC D + L GA+ ++ Sbjct: 118 KHHIPQVKGFWEKYYFKPGNAGWPVFDTAVGKVGVYICYDR-HFPEGWRQLGLGGAQLVY 176 Query: 173 SLNAS 177 + +A+ Sbjct: 177 NPSAT 181 >gi|297562551|ref|YP_003681525.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846999|gb|ADH69019.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 268 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 16/168 (9%) Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 S A+ + +DT G IV GFP + V N+V ++D+ K +L + + ++ Sbjct: 71 SEAVTAIAADT---GVAIVHGFPERADGAVYNAVQLVDSNGDRRTYRKTHL--FGDL-DR 124 Query: 127 RTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 F G +P+V D IR+G+L+C D+ + H G E L A + Sbjct: 125 GAFSPG--AEPVVQADLDGIRVGLLVCYDVEFPEAVRAH-ALAGTELLLVPTALMLPFTE 181 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF--DGQQQL 229 + +R V + +HL YVN+ + +L + G S DG + L Sbjct: 182 VAERIVPVRALENQIHL--AYVNRCDAEGDLRYAGLSTLVAPDGSETL 227 >gi|297198292|ref|ZP_06915689.1| hydrolase [Streptomyces sviceus ATCC 29083] gi|197715546|gb|EDY59580.1| hydrolase [Streptomyces sviceus ATCC 29083] Length = 262 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 21/184 (11%) Query: 45 ELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD 104 E+F++GY D + + + SA D + G I G+P + E V NS ++ Sbjct: 41 EMFLTGYAIGDDIARLAEAADGDSA-DAVAEIAGRHGVAIAYGYPERAGESVFNSAQLIS 99 Query: 105 AGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIV---FRDIRLGILICEDIWKN 156 A D + L NY + H E F G P+V + +G++IC D+ Sbjct: 100 A-------DGVRLANYRKTHLFGCFEHDHFEPG--EQPVVQARLGGLTVGLMICYDVEFP 150 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 N+ H G + L A H +V + L + YVN+VG + E F Sbjct: 151 ENVRAH-ALAGTDLLIVPTAQ--MHPFQFVAESLVPVRAWENQLYVAYVNRVGQEGEFEF 207 Query: 217 DGAS 220 G S Sbjct: 208 VGLS 211 >gi|40890111|gb|AAR97400.1| nitrilase [uncultured organism] Length = 342 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 28/176 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV--- 57 M ++ A QL+PV+G G + K A +A QG L +F E + YP + Sbjct: 1 MANVVRAAAVQLSPVLGSREGTVEKVVAAIRDAASQGAQLCVFPETVVPYYPYFSFIRPP 60 Query: 58 --FKKSFIQACSSAIDTLKSDTHDGGAG-------IVVGFPRQDQEGVLNSVVILDA-GN 107 K +Q A+ T+ A + +G +D + N+ ++ DA G Sbjct: 61 AAMGKDHMQLYEQAVVVPSPSTNAIAAAAKQHSIVVSIGVNERDHGTIYNTQLLFDADGT 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSN 158 ++ R KI FHE+ + G D R + R+G L C W++ N Sbjct: 121 LVQRRRKIT----PTFHERMVWGQG---DGSGLRCVDTQIGRIGSLAC---WEHYN 166 >gi|327480443|gb|AEA83753.1| NAD synthetase [Pseudomonas stutzeri DSM 4166] Length = 275 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 35/217 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDS---ALCAAIAVDALGKENVQ------TIMLPYKYTSP 333 ++ ++++ +++G+SGG+DS L A AV+ L + LPY+ Sbjct: 35 IQSCLRESGMKTLVLGISGGVDSTTAGLLAQRAVEGLRAAGEGDHYRFIAVRLPYQV--- 91 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS-----QFLQEEPSGIVAENIQSRIRG 388 Q E A A K D ++ L + + L E V N ++R+R Sbjct: 92 QHDEHEAQLAVDT-IKPDECHTVNIGTAVLGLAAATEALEPLSPEQRDFVLGNTKARMRM 150 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 ++N + +++ T + +E +G+ T +GD + PL L K QV Q+A+ + Sbjct: 151 VAQYTIANARQGLVIGTDHAAEAVMGFFTKFGDGACDLTPLAGLVKDQVRQIAAALGA-- 208 Query: 449 ITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 P ++ K P+A EL P + D+ + Sbjct: 209 ------------PEQLVHKVPTADLEELSPGKPDEAA 233 >gi|261335554|emb|CBH18548.1| NAD+ synthase, putative [Trypanosoma brucei gambiense DAL972] Length = 294 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 25/219 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI----MLPYKYTSPQSLED 338 L +Y++ N + +SGG+DSA+ ++ A E + + +S +LE Sbjct: 37 LNEYMRNNKLRGCVTNVSGGVDSAVVLSLCSRAQRMEGSPIVRNVGICQPICSSAWALER 96 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR---GNILMALS 395 +A G + V+ D+ + + + ++S +R G + L Sbjct: 97 GRENIRAAGAEEVVVDQTDIHRQLSLSVEAAIGIDGKDFARGQLRSYMRAPVGYYVAQLC 156 Query: 396 NHSKA--MLLTTSNKSEIS-VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 + S +++ T N E +GY GD + DL+K++VF++A Sbjct: 157 SQSGTPTIVMGTGNMDEDGYLGYFCKAGDGVVDVQLISDLHKSEVFKVAR---------E 207 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILD 490 LG +P + L+ +PSA+L QTD+E L PY ++ Sbjct: 208 LG-----VPENTLQAAPSADLWDGQTDEEELGFPYDFVE 241 >gi|320011950|gb|ADW06800.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 265 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 22/189 (11%) Query: 45 ELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD 104 ELF++GY D V + + SA G A + G+P + + V N+ ++ Sbjct: 44 ELFLTGYAIGDAVPELAEPADGPSARAIADLCVRHGLA-VHYGYPERSGDAVFNAAQLIG 102 Query: 105 AGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIV---FRDIRLGILICEDIWKN 156 D L NY + H E++ F G +P+V +R+G+LIC D+ Sbjct: 103 P-------DGAPLANYRKTHLFGSFEEKWFTPG--ENPVVQAELDGVRVGLLICYDVEFP 153 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 N+ H G E L A H +V + L I YVN+ G + E F Sbjct: 154 ENVRAH-ALAGTELLLVPTA--LMHPFPFVAEAVVPVRAFESQLYIAYVNRAGREGEFDF 210 Query: 217 DGASFCFDG 225 G S C G Sbjct: 211 TGLS-CLAG 218 >gi|146341448|ref|YP_001206496.1| aliphatic nitrilase [Bradyrhizobium sp. ORS278] gi|146194254|emb|CAL78276.1| Aliphatic nitrilase [Bradyrhizobium sp. ORS278] Length = 337 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 22/165 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K K+A+ Q P D+ +I K EEA +G LI F E+FI GYP Sbjct: 7 KYKVAVVQAAPAWLDLDASIKKTIGLIEEAADKGAKLIAFPEVFIPGYPWHIWMDSPAWC 66 Query: 58 FKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 + F+Q S +TL++ V+G +D + + +I G Sbjct: 67 IGRGFVQRYFDNSLAYDSPQAETLRAAVRKAKLTAVLGISERDGGSLYIAQWLIGPDGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVF--RDI-RLGILIC 150 IA R K+ P ++ E+ + G +D V DI RLG L C Sbjct: 127 IAKRRKLR-PTHA---ERTVYGEGDGSDLAVHDRPDIGRLGALCC 167 >gi|134292246|ref|YP_001115982.1| NAD synthetase [Burkholderia vietnamiensis G4] gi|134135403|gb|ABO56517.1| NH(3)-dependent NAD(+) synthetase [Burkholderia vietnamiensis G4] Length = 295 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 26/225 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ + ++G+SGG+DS+ A +AV+ L + + + P ++ D Sbjct: 49 LARYLRSSGMRTYVLGISGGVDSSTAGRLAQLAVEQLRADGYDARFIAMRL--PNGVQND 106 Query: 339 AAACAKALGC-------KYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 107 EADAQRALAFVRADETFTVDVKPAADAMLASLVASGHAFETAAQQDFVHGNIKARERMIA 166 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + +++ T + +E +G+ T +GD PL L K +V +A + Sbjct: 167 QYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADVLPLAGLSKRRVRAVARALGGDEL- 225 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 + +P + LE ELRP + D+ + Y +DD ++ Sbjct: 226 -----IVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDDFLE 260 >gi|309813071|ref|ZP_07706797.1| hydrolase, carbon-nitrogen family [Dermacoccus sp. Ellin185] gi|308432955|gb|EFP56861.1| hydrolase, carbon-nitrogen family [Dermacoccus sp. Ellin185] Length = 311 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 22/253 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL---- 56 +L ++IA+ Q VVGD+ N+A R EA + D+++ ELF++GY P+ L Sbjct: 33 ILDVMRIAVMQDKAVVGDVDANLAIIDRRAGEAAARRADVLVTPELFVAGYAPKRLHAGD 92 Query: 57 ------VFKKSFIQACSSAIDTLKS----DTHDGGAGIVVGFPRQDQEGVLNSVVILDAG 106 + A I L S T D A G P + + ++ D Sbjct: 93 PTQQTDIAGALAATAARHGIAVLASYPEVATADAPAARGGGAPGETARHIAATLFDTDGR 152 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKK 165 I+ R K+NL + E F SG V +R+ ++IC D+ + + + Sbjct: 153 PILHYR-KVNL---FDDDEAAAFSSGTDAPTTVELAGMRVSVIICFDV-EYPEMTRAAAL 207 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 GA+ + + A + + + +V + + + Y N VG +D L F G S Sbjct: 208 AGADVILAPTALTAGFDDVPE--VLVRARALENGVGLAYANHVGVEDGLTFGGGSVIVGP 265 Query: 226 QQQLAFQMKHFSE 238 L Q +E Sbjct: 266 DGGLLAQGGDGAE 278 >gi|238065385|gb|ACR39520.1| NAD+ synthase [Chlamydomonas reinhardtii] Length = 832 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 3/134 (2%) Query: 1 MLKKLKI-AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M ++L + A LN D GN+ + +++ EA +G + EL + GY ED + Sbjct: 1 MPRRLAVLATCNLNQWAMDFEGNLGRIKQSIREAKAKGATYRVGPELEVPGYGCEDHFLE 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIV--VGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + + L +D GI+ VG P + + N V L ++ +R K++L Sbjct: 61 LDTVTHSWEVLAALLADPEGLTDGILVDVGMPVIHRGVMYNCRVFLLNRRVLLIRPKLHL 120 Query: 118 PNYSEFHEKRTFIS 131 N + E R F + Sbjct: 121 ANDGNYRETRYFAT 134 >gi|284036565|ref|YP_003386495.1| nitrilase [Spirosoma linguale DSM 74] gi|283815858|gb|ADB37696.1| Nitrilase [Spirosoma linguale DSM 74] Length = 301 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 26/49 (53%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K+K+ + Q PV DIA I K + RQG +LF E FI GYP Sbjct: 2 KVKVGVVQATPVFFDIARTIDKLEALVVDGARQGCQFLLFPESFIPGYP 50 >gi|40890155|gb|AAR97422.1| nitrilase [uncultured organism] Length = 338 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 22/165 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K K+A+ Q P D+ +I K EEA ++G LI F E FI GYP Sbjct: 7 KYKVAVVQAAPAWLDLDASIDKTIGLIEEAAKKGAKLIAFPEAFIPGYPWHIWLDSPAWA 66 Query: 58 FKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 + F+Q S + L+ V+G +D + L +I G Sbjct: 67 IGRGFVQRYFDNSLAYDSPQAERLRQAVRKAKLTAVIGLSERDGGSLYLAQWLIGPDGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DI-RLGILIC 150 IA R K+ P ++ E+ + G +D V DI RLG L C Sbjct: 127 IAKRRKLR-PTHA---ERTVYGEGDGSDLAVHERADIGRLGALCC 167 >gi|87303355|ref|ZP_01086143.1| Possible nitrilase [Synechococcus sp. WH 5701] gi|87282003|gb|EAQ73965.1| Possible nitrilase [Synechococcus sp. WH 5701] Length = 272 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 19/168 (11%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 D N A A E A R+G +L+ E F G L S CS + T+ Sbjct: 16 DPDANFAAAEEQIELATRRGAELVGLPENFAFMGDDNRRLELAPSLADRCSRFLVTMARR 75 Query: 77 ---THDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKI-----NLPNYSEFHEK 126 T GG GFP E V + ++ G ++A DKI +LP+ + + E Sbjct: 76 YQVTLLGG-----GFPVPAGERVTYNRAELVGRDGQLLARYDKIHLFDVDLPDGNTYRES 130 Query: 127 RTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLF 172 T SG + P+V R+G+ IC D+ + + +HL GAE + Sbjct: 131 ETVRSGTALPPVVDAPGLCRIGLSICYDV-RFPELYRHLAGAGAELIM 177 >gi|325697693|gb|EGD39578.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK160] Length = 274 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 46/278 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ + K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDPEEEIRKSVDFLKAYLRKHPYLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETRDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + P L VN S + E +G Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-----IQPDVSLTVNIKESADAMTKAVEATG 126 Query: 377 IVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 + NI++R R AL+ A ++ T + +E + T +GD PL Sbjct: 127 VKVSDFNKGNIKARSRMIAQYALAGSYSAAVIGTDHAAENVTAFFTKFGDGGADILPLYR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 L K Q QL + LG P++ EK P+A+L +E P I D+ Sbjct: 187 LNKRQGKQL---------LATLGA-----EPALYEKVPTADL------EEEKP--GIADE 224 Query: 492 IIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 + + NE + + + +E Y ++KR Sbjct: 225 VALGVTYNEIDDYLEGKSVSAQAQETIESWWYKGQHKR 262 >gi|259908590|ref|YP_002648946.1| NAD synthetase [Erwinia pyrifoliae Ep1/96] gi|224964212|emb|CAX55719.1| NH(3)-dependent NAD(+) synthetase [Erwinia pyrifoliae Ep1/96] gi|283478560|emb|CAY74476.1| NAD synthetase [Erwinia pyrifoliae DSM 12163] Length = 275 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 60/274 (21%), Positives = 113/274 (41%), Gaps = 36/274 (13%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + V L+ Y+++ F +++G+SGG DS L + A+ + +T Sbjct: 15 PVIDAGEEIRTSVAFLKSYLKRYPFLTSLVLGISGGQDSTLTGKLCQMAISELRNETGNG 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---SGIVA 379 Y++ + P ++ D C A+ I + Q L+E S + Sbjct: 75 SYQFIAVRLPHGVQADEQDCQDAIAFIQPDRVITVNIKAAVQASEQALREAGITLSDFIR 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N ++R R +++ + +++ T + +E G+ T YGD NP+ L K Q Q Sbjct: 135 GNEKARERMKAQYSIAGMTAGVVVGTDHAAEAVTGFFTKYGDGGSDINPIFRLNKGQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLPPYPILDDIIKRI 496 L LG P + K P+A+L RP D+ +L + ++I R Sbjct: 195 L---------LQALG-----CPEHLWLKHPTADLEDDRPGLQDEVAL---GVTYEMIDRY 237 Query: 497 VENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 ++ E + + +E+ +E+KRR Sbjct: 238 LQGE--------SIDPAAAKIIENWYVKTEHKRR 263 >gi|253688285|ref|YP_003017475.1| NAD+ synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511196|sp|C6DFZ6|NADE_PECCP RecName: Full=NH(3)-dependent NAD(+) synthetase gi|251754863|gb|ACT12939.1| NAD+ synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 274 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 38/260 (14%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L++Y+ + F +++G+SGG DS L + A+ + +T Y++ + P ++ Sbjct: 30 LKNYLNAHPFVTSLVLGISGGQDSTLTGKLCQTAITELRNETGNARYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMS------QFLQEEPSGIVAENIQSRIRGNIL 391 D A C A+ + P L + + + + E S V N ++R R Sbjct: 90 DEADCQDAIAF---IQPDRVLTVNIKPAIEASEATLRAIGVELSDFVKGNEKARERMKAQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ + +++ T + +E G+ T YGD NP+ L K R + Sbjct: 147 YSIAGMNAGLVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQGKALLR 197 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EY 510 LG P + K+P+A+L + D+ SLP L ++I + ++ Q E Sbjct: 198 ELG-----CPSHLYTKAPTADL---EEDRPSLPDEVALGVTYEKI----DDYLEGKQIEA 245 Query: 511 NDETVRYVEHLLYGSEYKRR 530 D + +E+ +E+KRR Sbjct: 246 KDAAI--IENWYRKTEHKRR 263 >gi|254249857|ref|ZP_04943177.1| NAD+ synthase [Burkholderia cenocepacia PC184] gi|124876358|gb|EAY66348.1| NAD+ synthase [Burkholderia cenocepacia PC184] Length = 391 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 32/243 (13%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTI 324 P + EA+ + L Y++ ++G+SGG+DS+ A ++V+ L + Sbjct: 130 PHFDAEAEIARRIDFLAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLSVERLRADGYDAR 189 Query: 325 MLPYKYTSPQSLE-DAAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPS 375 + + P ++ D +AL DV P D ++ + F Sbjct: 190 FIAMRL--PNGVQNDEEDAQRALAFVRADEVLTVDVKPAADAMLRSLVASGHAFETPAQQ 247 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 V NI++R R A++ + +++ T + +E +G+ T +GD PL L K Sbjct: 248 DFVHGNIKARERMIAQYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADILPLAGLSKR 307 Query: 436 QVFQLASWRNSHGITSGLGP---LTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDD 491 +V G+ LG + +P + LE ELRP + D+ + Y +DD Sbjct: 308 RV---------RGVARALGGEELIVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDD 353 Query: 492 IIK 494 ++ Sbjct: 354 FLE 356 >gi|118468810|ref|YP_888419.1| aliphatic nitrilase [Mycobacterium smegmatis str. MC2 155] gi|118170097|gb|ABK70993.1| aliphatic nitrilase [Mycobacterium smegmatis str. MC2 155] Length = 322 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 26/171 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ A Q++PV+ +AK +E R G+ F E + YP Sbjct: 1 MRAAAVQMSPVLYSRDETVAKVVGIIDELGRAGVQFATFPETVVPYYPYFSFVQRPFEMS 60 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR 112 E L + SSA+D L G + VG +D + N+ ++ DA + R Sbjct: 61 VEHLKLYDQAVSIPSSAVDDLAGAAKAAGMVVSVGVTERDGGSLYNTQLLFDADGSLVQR 120 Query: 113 DKINLPNYSEFHEKRTFISG-----YSNDPIVFRDIRLGILICEDIWKNSN 158 + +P Y HE+ + G ++ D V R+G L C W++ N Sbjct: 121 RRKTIPTY---HERMIWGRGDGSGLFAVDSAVG---RIGQLAC---WEHYN 162 >gi|86608784|ref|YP_477546.1| hypothetical protein CYB_1309 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557326|gb|ABD02283.1| conserved hypothetical protein TIGR00268 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 306 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 +V++ SGG+DS+L A +A D LG E + P+ LE+A A+ +G ++ Sbjct: 48 MEQVLVAYSGGVDSSLVAKLACDQLG-ERALAVTAASPSLLPEDLEEAIQQARQIGIRHQ 106 Query: 352 VLPIHDL 358 ++ H+L Sbjct: 107 IVETHEL 113 >gi|315037770|ref|YP_004031338.1| NAD synthetase [Lactobacillus amylovorus GRL 1112] gi|325956245|ref|YP_004286855.1| NAD synthetase [Lactobacillus acidophilus 30SC] gi|312275903|gb|ADQ58543.1| NAD synthetase [Lactobacillus amylovorus GRL 1112] gi|325332810|gb|ADZ06718.1| NAD synthetase [Lactobacillus acidophilus 30SC] gi|327183061|gb|AEA31508.1| NAD synthetase [Lactobacillus amylovorus GRL 1118] Length = 276 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 32/256 (12%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDAL-------GKENVQTIMLPYKYTSPQ 334 L++Y++ N F K ++G+SGG DS L + A+ G ++ Q I + Y Sbjct: 31 LKNYLKANPFLKSYVLGISGGQDSTLTGKLCQMAMEEMRKETGDDSYQFIAVRLPYGVQA 90 Query: 335 SLEDAAACAKALGCKYD-VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +DAA K D ++ I + V+ ++ Q+ + NI++R R + A Sbjct: 91 DADDAADAVKFQHPDQDLIVNIKEPVDAMVKVVEATGQK-ITDFNKGNIKARERMVVQYA 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ + ++ T + +E G+ T +GD + PL L K R + L Sbjct: 150 IAGANNGAVVGTDHAAENFCGFYTKFGDGAADLTPLFRLDK---------RQGKMLLKEL 200 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE 513 G P + EK+P+A+L + D LP L K I + E +E +D+ Sbjct: 201 G-----CPEHLYEKAPTADLEEEKPD---LPDEVALGVTYKEIDDYLEG-----KEVSDK 247 Query: 514 TVRYVEHLLYGSEYKR 529 +E L S++KR Sbjct: 248 AANQIEKLWNKSKHKR 263 >gi|186683955|ref|YP_001867151.1| ExsB family protein [Nostoc punctiforme PCC 73102] gi|186466407|gb|ACC82208.1| ExsB family protein [Nostoc punctiforme PCC 73102] Length = 275 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 + +I SGG+DS L A IA DALG + + P+ LEDA A +G + Sbjct: 16 MEQALIAYSGGVDSTLVAKIAYDALGDRALAVTAVSPSLL-PEELEDAKIQAATIGIAHK 74 Query: 352 VLPIHDLVN 360 ++ H++ N Sbjct: 75 IVQTHEMEN 83 >gi|254561093|ref|YP_003068188.1| nitrilase/amidohydrolase [Methylobacterium extorquens DM4] gi|254268371|emb|CAX24326.1| putative nitrilase/amidohydrolase [Methylobacterium extorquens DM4] Length = 305 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 27/172 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------PED 55 +++A Q PV D A +A +A G +LI F E+FI+GYP D Sbjct: 1 MRVAAIQAAPVFLDSAATTDRALEFLRQAASGGAELIAFPEVFIAGYPSWLRVPSIAAND 60 Query: 56 LVFK-------KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVIL--D 104 + K +S I A + + S++ G + VGF + G V S+ + D Sbjct: 61 ALLKVGHIAYLRSAIAANGPELAAIWSESAKLGVFVYVGFLERTASGGSVYASLAAIHPD 120 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV--FRDIRLGILICEDIW 154 G I+ V K+ FHE+ + G V F+ +R G L C + W Sbjct: 121 KG-IVGVHRKLK----PTFHERLIWSDGDGRGLEVHDFKGLRAGALNCYENW 167 >gi|237756889|ref|ZP_04585365.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurihydrogenibium yellowstonense SS-5] gi|237690952|gb|EEP60084.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurihydrogenibium yellowstonense SS-5] Length = 250 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 22/221 (9%) Query: 11 QLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAI 70 QLN +G++ NI K + + L+L E+F G+ E L+ + Sbjct: 7 QLNLELGNVENNIKKVFDILKSDKIKSESLVLLPEMFSCGFDNERLL---DHSRKTPRIY 63 Query: 71 DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFI 130 L+ +HD I P + + + N ++D G I R KI L ++ E + F Sbjct: 64 RELQKISHDKKLVIAGTLPERKRNDIYNMGFVIDNGEITGKRPKIKL--FTPTDEHKYFK 121 Query: 131 SGYSNDPIVFRDI------RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 +G + + DI LG +IC ++ + NI +L+K+ E + P K Sbjct: 122 AGKN----IHLDITESSAGNLGFMICFEL-RFPNISYNLRKKDVEIIL----VPAQWGKE 172 Query: 185 KKRHEIVTGQISHVHLP--IIYVNQVGGQDELIFDGASFCF 223 + H + + + +I N VG +L F G S + Sbjct: 173 RAEHLKILSRARAIETQSYVIVSNTVGRIGDLEFAGNSAIY 213 >gi|34556586|ref|NP_906401.1| ATP-utilizing protein of the PP-loop superfamily [Wolinella succinogenes DSM 1740] gi|34482300|emb|CAE09301.1| ATP-UTILIZING ENZYME OF THE PP-LOOP SUPERFAMILY [Wolinella succinogenes] Length = 271 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 SL+ +Q +I+ SGG+DS+L A DALG E I + Y + + +++A A Sbjct: 7 SLKKEIQ--ALESLIVAFSGGVDSSLLLKAAHDALG-EKALGITVTTPYMAEREIKEAIA 63 Query: 342 CAKALGCKYDVL 353 AK +G +++VL Sbjct: 64 FAKEIGARHEVL 75 >gi|322412429|gb|EFY03337.1| NAD synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 274 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETGDQAYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL ++P L +N ++ Q + +G+ NI++R R Sbjct: 90 DEADAQKALAF---IMPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLQ 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 198 VLGA-----DSALYEKVPTADLEDQKPGLADEVALGVTYQEIDDYLE 239 >gi|313637434|gb|EFS02893.1| carbon-nitrogen family hydrolase [Listeria seeligeri FSL S4-171] Length = 298 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 26/204 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------PED 55 LKIA+ Q + N+ A+ +EA +G DL+LF E++ +GY P D Sbjct: 2 LKIALVQKKAMANQKNTNLKLAQLYIKEAANEGADLVLFPEMWSNGYAAPFAEAFDNPLD 61 Query: 56 LVFKKSF-------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 ++K + S + L+ + G+ + ++ + N+ +I+D G Sbjct: 62 PNYEKERTSWLEEGVTTSSEYVTALRKQANAYHVGVCATYLSKNGKKNQNTAIIIDRNGE 121 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQ 166 II K++ ++S + + + P+ F +++G++IC D + + L Sbjct: 122 IILDYAKVHTCDFS----LESLLQSGTEFPVCEFDGVKIGVMICFDR-EFPESARTLMLN 176 Query: 167 GAEFLFSLNA---SPYYHNKLKKR 187 GAE + NA +P N+L R Sbjct: 177 GAEIILVPNACDMNPARINQLSTR 200 >gi|297190944|ref|ZP_06908342.1| hydrolase [Streptomyces pristinaespiralis ATCC 25486] gi|197721856|gb|EDY65764.1| hydrolase [Streptomyces pristinaespiralis ATCC 25486] Length = 280 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 18/188 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y PE Sbjct: 1 MATVVRAALVQAT-WTGDTESMIAKHEEHAREAARQGAKVIGFQEVFNAPYFCQVQDPEH 59 Query: 56 LVFKKSFIQACS-SAIDTLKSDTHDGGAGIVVGFPRQDQEGV---LNSVVILDA-GNIIA 110 + + + + L +T G+V+ P + EG N+ ++DA G+ + Sbjct: 60 YRWAEPVPDGPTVRRMQALARET-----GMVIVVPVFEIEGAGFYYNTAAVIDADGSYLG 114 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAE 169 K ++P F EK F G + P+ + ++G+ IC D + L GA+ Sbjct: 115 KYRKHHIPQVKGFWEKYYFRPGNAGWPVFDTAVGKVGVYICYDR-HFPEGWRQLGLGGAQ 173 Query: 170 FLFSLNAS 177 +++ +A+ Sbjct: 174 LVYNPSAT 181 >gi|90424508|ref|YP_532878.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris BisB18] gi|90106522|gb|ABD88559.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Rhodopseudomonas palustris BisB18] Length = 579 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 7/156 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+++A Q P + + NIA E+A + G LI+ E+ +GY D Sbjct: 1 MSRKIQVATVQFEPTMFEKERNIAGLLALCEQAAQSGARLIVTPEMGTTGYCWFDRAEVA 60 Query: 61 SFIQAC-SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLP 118 +++ + D + IVVG P D +G+ NS V++ +I K Sbjct: 61 PYVEPIPGPSTDRFAALARKYDCYIVVGLPEVDDDGIYFNSAVLIGPEGVIGRHRK---- 116 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDI 153 + E + +G ++ + I R+ ILIC DI Sbjct: 117 THPYIAEPKWSAAGDLHNQVFETPIGRIAILICMDI 152 >gi|297807251|ref|XP_002871509.1| carbon-nitrogen hydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297317346|gb|EFH47768.1| carbon-nitrogen hydrolase family protein [Arabidopsis lyrata subsp. lyrata] Length = 365 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 19/199 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K I + QL+ V D NI+ A++A EEA +G L+L E++ S Y + I Sbjct: 83 KFNIGLCQLS-VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYSNDSFPVYAEDI 141 Query: 64 QAC--SSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKINL- 117 A +S + S+ ++G P + + + N+ + + G + A KI+L Sbjct: 142 DAGGDASPSTAMLSEVSKRLRITIIGGSIPERVGDRLYNTCCVFGSDGELKAKHRKIHLF 201 Query: 118 ----PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL- 171 P F E +T +G IV D+ R+GI IC DI + + +GA L Sbjct: 202 DIDIPGKITFMESKTLTAG-ETPTIVDTDVGRIGIGICYDI-RFQELAMIYAARGAHLLC 259 Query: 172 ----FSLNASPYYHNKLKK 186 F++ P + L++ Sbjct: 260 YPGAFNMTTGPLHWELLQR 278 >gi|83645159|ref|YP_433594.1| amidohydrolase [Hahella chejuensis KCTC 2396] gi|83633202|gb|ABC29169.1| predicted amidohydrolase [Hahella chejuensis KCTC 2396] Length = 300 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 25/186 (13%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICE 151 N+ V+L+ G+++ K+++P+ F+EK F G ++ F+ I +LG+L+C Sbjct: 101 NTAVVLEKDGSLVGKYRKMHIPDDPGFYEKFYFTPGDADTEAGFKPIQTSVGKLGVLVCW 160 Query: 152 DIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE-----IVTGQISHV---HLPII 203 D W + + GA+ L A + + H+ +T Q +H LP+I Sbjct: 161 DQW-YPEAARLMALAGADILIYPTAIGWDVRDDQAEHKRQLDAWITIQRAHAVANGLPVI 219 Query: 204 YVNQVGGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQNFMTE---WHYDQQLSQ 253 N+VG + + +F G SF Q ++ Q S Q E D Sbjct: 220 VANRVGQEPDPSQQSPGSLFWGNSFIAGQQGEILRQADDSSVQVIAAEIDLQRTDDVRRI 279 Query: 254 WNYMSD 259 W Y+ D Sbjct: 280 WPYLRD 285 >gi|306826923|ref|ZP_07460223.1| NAD+ synthetase [Streptococcus pyogenes ATCC 10782] gi|304430941|gb|EFM33950.1| NAD+ synthetase [Streptococcus pyogenes ATCC 10782] Length = 274 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETSDQAYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL + P L +N ++ Q + +GI NI++R R Sbjct: 90 DEADAQKALAF---IAPDQTLTINIKAAVDGQAAALQQAGIEISDFNKGNIKARQRMISQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 198 VLGA-----DAALYEKVPTADLEDQKPGLADEVALEVTYQDIDDYLE 239 >gi|308234387|ref|ZP_07665124.1| hypothetical protein AvagD15_05047 [Atopobium vaginae DSM 15829] gi|328944203|ref|ZP_08241667.1| NAD synthase superfamily protein [Atopobium vaginae DSM 15829] gi|327491122|gb|EGF22897.1| NAD synthase superfamily protein [Atopobium vaginae DSM 15829] Length = 894 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 43/301 (14%) Query: 157 SNICKHLKKQGAEFLFSLNASP-YYHNKLKKRHEIVTGQ-ISHVHLPIIYVNQVGGQDEL 214 SN H ++ AE NA+P NK + + I+ P+ V +G + Sbjct: 175 SNTSAHTAERTAE-----NAAPDTAANKFARVTPFMQDTLITPTICPVYVVPSIGCINNK 229 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEA 274 ++ SF ++ F EQ F ++ DQ + + +S ST ++ Sbjct: 230 LYVAPSFVLQPHGTMSAYCAPF-EQRFCL-YNTDQSPTSKDKLSTQKLSTRI----QKNP 283 Query: 275 DY------NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP- 327 DY +A + ++D +V+ + GG+ S++ AA+ VDALG +V ++ P Sbjct: 284 DYAYMHIWDALCMGIQDRCAMFGAREVVCVMDGGLASSVLAALLVDALGALHVHALIAPR 343 Query: 328 ---YKYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAENIQ 383 Y +T+ +L A ALG D +D+ F + + + +V Sbjct: 344 ECSYDFTAANTL------ATALG--IDARTCNDMSYGQGFRTLQEKIHVREGALVG---Y 392 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 ++ L A+L+++ +K +G TL+ D PL DL + V +LA Sbjct: 393 AQTWAQTL-------SAVLVSSCDKLSYMLGVYTLF-DTCTRIAPLADLLRCDVERLARA 444 Query: 444 R 444 R Sbjct: 445 R 445 >gi|218246420|ref|YP_002371791.1| ExsB family protein [Cyanothece sp. PCC 8801] gi|218166898|gb|ACK65635.1| ExsB family protein [Cyanothece sp. PCC 8801] Length = 274 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + + +I SGGIDS L A IA D LG + I P+ LE+A A +G K Sbjct: 14 SQMEQALIAYSGGIDSTLVAKIAYDVLGDRAL-AITAVSPSLLPEELEEAKIQAATIGIK 72 Query: 350 YDVLPIHDLVNHFFS 364 ++++ H++ N ++ Sbjct: 73 HELIETHEMDNPNYT 87 >gi|251783107|ref|YP_002997410.1| NAD synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391737|dbj|BAH82196.1| NAD(+) synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 288 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 34/241 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F + ++G+SGG DS L +A A+ + QT Y++ + P ++ Sbjct: 44 LKAYLRKHSFLETYVLGISGGQDSTLAGKLAQMAIAELREQTGDQAYQFIAVRLPYGVQA 103 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL ++P L +N ++ Q + +G+ NI++R R Sbjct: 104 DEADAQKALAF---IMPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 160 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 161 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLQ 211 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESFIN 505 LG ++ EK P+A+L +P D+ +L Y +DD + K I E ++ I Sbjct: 212 VLGA-----DSALYEKVPTADLEDQKPGLADEVALGVTYQEIDDYLEGKLISEAAQATIE 266 Query: 506 N 506 Sbjct: 267 K 267 >gi|74025958|ref|XP_829545.1| NAD+ synthase [Trypanosoma brucei TREU927] gi|70834931|gb|EAN80433.1| NAD+ synthase, putative [Trypanosoma brucei] Length = 294 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 25/219 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI----MLPYKYTSPQSLED 338 L +Y++ N + +SGG+DSA+ ++ A E + + +S +LE Sbjct: 37 LNEYMRNNKLRGCVTNVSGGVDSAVVLSLCSRAQRMEGSPIVRNVGICQPICSSAWALER 96 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR---GNILMALS 395 +A G + V+ D+ + + + ++S +R G + L Sbjct: 97 GRENIRAAGAEEVVVDQTDIHRQLSLSVEAAVGIDGKDFARGQLRSYMRAPVGYYVAQLC 156 Query: 396 NHSKA--MLLTTSNKSEIS-VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 + S +++ T N E +GY GD + DL+K++VF++A Sbjct: 157 SQSGTPTIVMGTGNMDEDGYLGYFCKAGDGVVDVQLISDLHKSEVFKVAR---------E 207 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILD 490 LG +P + L+ +PSA+L QTD+E L PY ++ Sbjct: 208 LG-----VPENTLQAAPSADLWDGQTDEEELGFPYDFVE 241 >gi|40890321|gb|AAR97505.1| nitrilase [uncultured organism] Length = 338 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 63/166 (37%), Gaps = 24/166 (14%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K ++A+ Q P D+ +++K+ EEA +G LI F E FI GYP Sbjct: 7 KYRVAVVQAAPAWLDLEASVSKSIALIEEAAAKGAKLIAFPEAFIPGYPWYIWLDSPAWA 66 Query: 58 FKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 + F+Q S + L+ G V+G +D + L +I G Sbjct: 67 IGRGFVQRYFDNSLSYDSPQAERLRLAVKKAGMTAVLGLSERDGGSLYLAQWLIGPDGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI----RLGILIC 150 IA R K+ H +RT + D RLG L C Sbjct: 127 IAKRRKLR-----PTHAERTVYGEGDGSDLAVHDRPGIGRLGALCC 167 >gi|309803827|ref|ZP_07697912.1| NAD+ synthase [Lactobacillus iners LactinV 11V1-d] gi|308164061|gb|EFO66323.1| NAD+ synthase [Lactobacillus iners LactinV 11V1-d] Length = 287 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 56/268 (20%) Query: 283 LRDYVQKN-NFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L++Y+ KN ++G+SGG DS L +A A+ + +T + LPY Sbjct: 31 LKEYLLKNPGLKTYVLGISGGQDSTLTGKLAQMAISELRAETGDNEYQFIAVRLPYGVQK 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAE-----NIQSRI 386 S A + DL+ + S + ++ E SGI NI++R Sbjct: 91 DASDAADAVAFQHAD--------QDLIVNIKSAVDATVKSLEESGIEISDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ +K ++ T + +E G+ T YGD + P+ L K Q Sbjct: 143 RMIVQYAIAGANKGAVIGTDHAAENISGFFTKYGDGASDILPIFRLNKRQ---------- 192 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEE 501 G L E+ P + +K+P+A+L RP D+++L Y +DD ++ Sbjct: 193 -----GKALLQELNCPKHLYQKAPTADLEEKRPALPDEQALGVSYDKIDDYLE------- 240 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E +E+L SE+KR Sbjct: 241 -----GKELAKVDAERIEYLWTRSEHKR 263 >gi|289581456|ref|YP_003479922.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Natrialba magadii ATCC 43099] gi|289531009|gb|ADD05360.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Natrialba magadii ATCC 43099] Length = 306 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 72/166 (43%), Gaps = 30/166 (18%) Query: 6 KIAIAQLNPVVGDIAGNIA-KARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSFI 63 +IA+AQ P G+I N RE A+ DL++ EL SGY VF+ +S + Sbjct: 30 RIAVAQTTPAFGEIERNREHTVELVREHAD---ADLLVLPELATSGY-----VFESESEL 81 Query: 64 QACSSAIDTLKSDTHDGGAG-----IVVGFPRQ---DQEGV------LNSVVILDAGNII 109 + D +D A IV GFP D + NS +++ + Sbjct: 82 ATMAEPRDGATADAWADVAAETDTWIVGGFPEAADVDTDTTDANSRYYNSALVVSPNGVE 141 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIW 154 AV K++L N E R F +G P+V RLG+ IC D+W Sbjct: 142 AVYRKLHLWN----EEHRWFTAG-DELPVVGTPFGRLGVQICNDLW 182 >gi|257059463|ref|YP_003137351.1| PP-loop domain protein [Cyanothece sp. PCC 8802] gi|256589629|gb|ACV00516.1| PP-loop domain protein [Cyanothece sp. PCC 8802] Length = 274 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + + +I SGGIDS L A IA D LG + I P+ LE+A A +G K Sbjct: 14 SQMEQALIAYSGGIDSTLVAKIAYDVLGDRAL-AITAVSPSLLPEELEEAKIQAATIGIK 72 Query: 350 YDVLPIHDLVNHFFS 364 ++++ H++ N ++ Sbjct: 73 HELIETHEMDNPNYT 87 >gi|170091184|ref|XP_001876814.1| predicted protein [Laccaria bicolor S238N-H82] gi|164648307|gb|EDR12550.1| predicted protein [Laccaria bicolor S238N-H82] Length = 331 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 30/48 (62%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY 51 +L+IA+ Q NP +G + N+AKAR + + +DL+ F E+ +GY Sbjct: 7 RLRIAVVQFNPKIGQVQANLAKARGLCRKLLPRSVDLLCFPEMAFTGY 54 >gi|118574280|sp|Q1IHK6|QUEC_ACIBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC Length = 237 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY-KYTSPQSLEDAAACAKA 345 VQ+ + K ++ LSGG+DS +CA +AV G EN+ + + Y + T+ + + AA A+ Sbjct: 3 VQRGDTGKAVVVLSGGMDSTVCATLAVREYGAENIGALHVSYGQRTAAREKQAFAAVAER 62 Query: 346 LG 347 LG Sbjct: 63 LG 64 >gi|291616669|ref|YP_003519411.1| YbeM [Pantoea ananatis LMG 20103] gi|291151699|gb|ADD76283.1| YbeM [Pantoea ananatis LMG 20103] Length = 265 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 14/190 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q V D N + ++A+R G DL++ E ++ D+ ++ Sbjct: 1 MKVALGQFA-VQRDWQENAITCQDMMDKASRAGADLLVLPEAVLA----TDITNPDFILE 55 Query: 65 ACSSA----IDTLKSDTHDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPN 119 A S + L S + G V+G E V N +V++ G I+A K++L + Sbjct: 56 AAQSPDGPFLSQLLSASKGHGLTTVLGMHMPGSERKVFNVLVVIRDGKIVAEYRKLHLYD 115 Query: 120 YSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 E + +G P+V +++G++ C D+ + + + L +GAE L + S Sbjct: 116 AFAMQESKRVEAGQEIPPLVDVAGMKVGLMTCYDV-RFPELSRRLALEGAEVL--VLPSA 172 Query: 179 YYHNKLKKRH 188 + LK+ H Sbjct: 173 WVKGALKEMH 182 >gi|271500489|ref|YP_003333514.1| NAD+ synthetase [Dickeya dadantii Ech586] gi|270344044|gb|ACZ76809.1| NAD+ synthetase [Dickeya dadantii Ech586] Length = 274 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 38/260 (14%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L++Y++ + F K +++G+SGG DS L + A+ + +T Y++ + P ++ Sbjct: 30 LKNYLKAHPFVKSLVLGISGGQDSTLTGKLCQTAITELRQETGKADYRFIAVRLPYGVQA 89 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 D C A+ ++ P D + E S V N ++R R Sbjct: 90 DEQDCQDAIQFIEPDQVLTVNIKPAVDASEATLRAIGI----ELSDFVKGNEKARERMKA 145 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 +++ + +++ T + +E G+ T YGD NP+ L K R + Sbjct: 146 QYSIAGMNAGLVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQGKALL 196 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEY 510 + LG P + K+P+A+L + D+ SLP L ++I + E ++ Sbjct: 197 TLLG-----CPSHLYTKAPTADL---EDDRPSLPDEMALGITYEKIDDYLEG-----KQL 243 Query: 511 NDETVRYVEHLLYGSEYKRR 530 + V +E +E+KRR Sbjct: 244 DPIDVAVIEGWYRRTEHKRR 263 >gi|302919846|ref|XP_003052948.1| hypothetical protein NECHADRAFT_99513 [Nectria haematococca mpVI 77-13-4] gi|256733888|gb|EEU47235.1| hypothetical protein NECHADRAFT_99513 [Nectria haematococca mpVI 77-13-4] Length = 714 Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust. Identities = 122/591 (20%), Positives = 202/591 (34%), Gaps = 130/591 (21%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSFI 63 + +A A L + D GN + + A +G L EL I GY D + +F+ Sbjct: 4 VTVAAATLPSIPLDFLGNKERILESIRIAKDKGATLRTGPELEIPGYCALDHHLEGDTFL 63 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + D + SD G I +G + + NS V+ I +R K L N + Sbjct: 64 HSWEVLADII-SDEVCKGMLIDLGLGVRHRNVRYNSRVLCTYRKIFCIRPKTALANDGLY 122 Query: 124 HEKRTF--------------------ISGYSNDPI-----VFRDIRLGILICEDIWKNSN 158 E R F ++G S+ PI D + CE+++ N Sbjct: 123 REARHFTAWSKPRQVETYYLDGPVRKVTGQSSVPIGDMILSTPDTAVTCESCEEMFVPLN 182 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG--GQDELIF 216 GAE + + +AS KL+ R E++ + +Y N G G ++ Sbjct: 183 PSTFAGLNGAEIILNSSASHAELRKLRTRLELIANSTRKLGGIYVYANATGVDGDARMMH 242 Query: 217 DGASFCFDGQQQLAFQMKHFS---------------EQNFMTEWHYDQQLS--------Q 253 DG+S + A Q FS ++F + + Q + + Sbjct: 243 DGSSMVIQNGEVFA-QGSQFSLASVEVTVATVDIEKVRSFRSSISRNVQAAAQPEFPRVE 301 Query: 254 WNYMSDDSASTMYIPLQEE-------------EADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + A +++ + E E Y A + L Y+ + N + LS Sbjct: 302 CDLVLSRPAEEIWLSNRPEISPAIQLKILDPMEEIYMATAVYLWQYLTRTNSPGFFLPLS 361 Query: 301 GGIDSALCA--------AIAVDALGKENVQTIML-------PYKYTSPQSL--------- 336 GG+DS+ A + V EN L + T+PQ + Sbjct: 362 GGLDSSSVALFVYGMARLVMVSIKAGENSTLEALRRVTGDKEFTPTTPQEIVGRLLHTCY 421 Query: 337 -----------EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS---------- 375 A A LG + + I + V ++ + L +P Sbjct: 422 MGTVNSSEETEGRAKKLADVLGSYHSSIKIDETVAANELMVEKALSFKPKYQVEGGSRAE 481 Query: 376 GIVAENIQSRIRGNILMALSNHSKA-----------MLLTTSNKSEISVGYGTLYGDMSG 424 + +NIQ+R R I +L+ S ++L + N E GY T Y S Sbjct: 482 NLAKQNIQARSRMVIAYSLAQLSTTARDLPRAGAALLVLGSGNVDENLRGYFTKYDASSA 541 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 PL + K W ++ L LT+ I + +P+AEL P Sbjct: 542 DLAPLGSISKNDAKDFQRWARANW---DLPILTDFI-----DATPTAELLP 584 >gi|329119474|ref|ZP_08248159.1| transcription regulator ExsB [Neisseria bacilliformis ATCC BAA-1200] gi|327464407|gb|EGF10707.1| transcription regulator ExsB [Neisseria bacilliformis ATCC BAA-1200] Length = 384 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 N K ++ SGG DS C A+ G+ENVQTI Y LE A + A+ G K Sbjct: 2 NSEKALVIFSGGQDSTTCLIQAIQTYGRENVQTISFQYGQRHAVELERARSIAQDWGVKQ 61 Query: 351 DVLPIHDLVNH 361 +L + L+ H Sbjct: 62 TILDL-SLIKH 71 >gi|47214136|emb|CAG01394.1| unnamed protein product [Tetraodon nigroviridis] Length = 699 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 66/300 (22%), Positives = 120/300 (40%), Gaps = 53/300 (17%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ++ K ++A+ Q+ V A N+++AR +EA QG L++ E F S P F Sbjct: 7 VMSKFRLAVVQMK-VTSVKAENLSRARSLVKEAAGQGAQLVVLPEFFNS---PYGTSFFS 62 Query: 61 SFIQAC-SSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVIL---------DAGNII 109 S+ + + TL + +V G P +D+ + N+ V+ N Sbjct: 63 SYAEKIPGESTQTLSQAAKESRVYLVGGSIPEEDEGRLYNTCVVFGLTESCSSSTGSNHS 122 Query: 110 AVRDKINL-----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 R +I+L P F E T G + ++G+ IC DI + + Sbjct: 123 LSRFQIHLFDIDVPGKIRFQESETLSPGNTLSMFQTPFCQVGVGICYDI-RFAEWAHSYS 181 Query: 165 KQGAEFL-----FSLNASPYYHNKLKKRHEIVTGQ----------------ISHVHLPII 203 ++GA+ L F++ P H +L +R V Q +S H ++ Sbjct: 182 RKGAQLLVYPGAFNMTTGP-AHWELLQRARAVDNQVYVATAAPAREESASYVSWGHSMVV 240 Query: 204 -----YVNQVGGQDELIFDGASFCF--DGQQQLAF---QMKHFSEQNFMTEWHYDQQLSQ 253 V++ G ++ L++ + DGQQ+L +K S + +T +QL++ Sbjct: 241 NPWGEVVSKAGPEEALVYADLDLQYLADGQQRLVIVHPDVKWGSRKQHLTTGESSRQLAE 300 >gi|172064177|ref|YP_001811828.1| NAD+ synthetase [Burkholderia ambifaria MC40-6] gi|238692863|sp|B1Z0R0|NADE_BURA4 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|171996694|gb|ACB67612.1| NAD+ synthetase [Burkholderia ambifaria MC40-6] Length = 282 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 26/240 (10%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTI 324 P + +AD V L Y++ + ++G+SGG+DS+ A +AV+ L Sbjct: 21 PHFDVDADIARRVDFLAQYLRSSGLRTYVLGISGGVDSSTAGRLAQLAVEQLRAGGYDAR 80 Query: 325 MLPYKYTSPQSLE-DAAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPS 375 + + P ++ D A +AL DV P D ++ + F Sbjct: 81 FIAMRL--PNGVQNDEADAQRALAFVRADETFTVDVKPAADAMLASLVASGHAFETPAQQ 138 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 V NI++R R A++ + +++ T + +E +G+ T +GD PL L K Sbjct: 139 DFVHGNIKARERMIAQYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADVLPLAGLSKR 198 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +V +A + + +P + LE ELRP + D+ + Y +DD ++ Sbjct: 199 RVRAVARALGGDEL------IVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDDFLE 247 >gi|72381892|ref|YP_291247.1| putative nitrilase [Prochlorococcus marinus str. NATL2A] gi|72001742|gb|AAZ57544.1| nitrilase-like protein [Prochlorococcus marinus str. NATL2A] Length = 274 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 24/171 (14%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 DI N+ A E A R+G DL+ E F G + L S + C+S + T+ Sbjct: 16 DIDSNLNAAEEQIELAARRGADLVGLPENFAFLGEDQKKLKIASSIYEKCNSFLVTMARR 75 Query: 77 THD---GGAGIVVGFPRQDQEGV--LNSVVILDA-GNIIAVRDKI-----NLPNYSEFHE 125 GG GFP +G+ LN + G +A DKI +LP + + E Sbjct: 76 YQVVLLGG-----GFPVPAGDGIRTLNRAELFGKDGQSLARYDKIHLFDVDLPEGNTYRE 130 Query: 126 KRTFISGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 T +SG + P+V D+ ++G+ IC D+ + + + L +GA+ L Sbjct: 131 SETIVSGSESPPVV--DVPGLCKIGLSICYDV-RFPELYRDLVNKGADLLM 178 >gi|291520490|emb|CBK75711.1| Predicted amidohydrolase [Butyrivibrio fibrisolvens 16/4] Length = 280 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 6/149 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 K+AI Q +I NI EA++ G D++L E FI+GY + F+KS I Sbjct: 3 FKVAILQFRAENTNIKKNIDTIIYYMHEASKNGADILLLPECFITGYDLP-ITFEKS-IS 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVV-GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 I + + G+V+ F + ++ + VI +G II K++ +F Sbjct: 61 CEDDVIAKVCNTAKMLSIGVVLTSFTKGKEKPQNTAFVINKSGKIIMNYSKVHT---CDF 117 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICED 152 +++ +G F I++GI+IC D Sbjct: 118 ADEKDVEAGTEFKVCDFEGIKIGIMICYD 146 >gi|317047853|ref|YP_004115501.1| NAD+ synthetase [Pantoea sp. At-9b] gi|316949470|gb|ADU68945.1| NAD+ synthetase [Pantoea sp. At-9b] Length = 275 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 41/235 (17%) Query: 268 PLQEEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + + + V L+ Y++ N +++G+SGG DS L ++ A+ + +T Sbjct: 15 PVIDPQQEVRVSVDFLKSYLKTNPGIKTLVLGISGGQDSTLTGILSQTAIRELREETGDN 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV-NHFFSLMSQFLQEEPSG 376 + LPY + D C AL + P LV N ++++ + +G Sbjct: 75 DYTFIAVRLPYGVQA-----DEQDCQDALAF---IQPDRSLVVNIKEAVLASERALQDAG 126 Query: 377 I-----VAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 I + N ++R R +++ +K +++ T + +E G+ T YGD NP+ Sbjct: 127 ITLSDYIRGNEKARERMKAQYSIAGMTKGVVVGTDHAAEAVTGFFTKYGDGGSDINPIFR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 L K Q QL LG P + K P+A+L RP D+ +L Sbjct: 187 LNKGQGKQLLKL---------LG-----CPEHLYLKHPTADLEDDRPGLQDEVAL 227 >gi|94971670|ref|YP_593718.1| ExsB [Candidatus Koribacter versatilis Ellin345] gi|94553720|gb|ABF43644.1| ExsB [Candidatus Koribacter versatilis Ellin345] Length = 257 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY-KYTSPQSLEDAAACAKA 345 VQ+ + K ++ LSGG+DS +CA +AV G EN+ + + Y + T+ + + AA A+ Sbjct: 23 VQRGDTGKAVVVLSGGMDSTVCATLAVREYGAENIGALHVSYGQRTAAREKQAFAAVAER 82 Query: 346 LG 347 LG Sbjct: 83 LG 84 >gi|167043840|gb|ABZ08529.1| putative PP-loop family protein [uncultured marine crenarchaeote HF4000_APKG3E18] Length = 268 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + V++ LSGG+DSAL A A LGK + + YK + + LE A + +G K+ V Sbjct: 17 NTVLVALSGGVDSALVAYSAYAKLGKSAI-AVTADYKTLAQEELEYAKKISLEIGIKHIV 75 Query: 353 LPIHDLVNHFF 363 + ++L N F Sbjct: 76 IEYNELANESF 86 >gi|188997362|ref|YP_001931613.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932429|gb|ACD67059.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurihydrogenibium sp. YO3AOP1] Length = 250 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 22/221 (9%) Query: 11 QLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAI 70 QLN +G++ NI K + + L+L E+F G+ E L+ + Sbjct: 7 QLNLELGNVESNIKKVFDILKSDKIKSESLVLLPEMFSCGFDNERLL---DHSRKTPKIY 63 Query: 71 DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFI 130 L+ +HD I P + + + N ++D G I A R KI L ++ E + + Sbjct: 64 RELQKISHDKKLVIAGTLPERKRNDIYNMGFVIDNGEITAKRPKIKL--FTPTDEHKYYK 121 Query: 131 SGYSNDPIVFRDI------RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 +G + + DI LG +IC ++ + NI +L+K+ E + P K Sbjct: 122 AGKN----IHLDITESSAGNLGFMICFEL-RFPNISYNLRKKDVEIIL----VPAQWGKE 172 Query: 185 KKRHEIVTGQISHVHLP--IIYVNQVGGQDELIFDGASFCF 223 + H + + + +I N VG +L + G S + Sbjct: 173 RAEHLKILSRARAIETQSYVIISNTVGKIGDLEYAGNSAIY 213 >gi|326202134|ref|ZP_08192004.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium papyrosolvens DSM 2782] gi|325987929|gb|EGD48755.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium papyrosolvens DSM 2782] Length = 267 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 16/212 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K+++ + Q+ V N+ KA EE ++QG D+ + E+FI Y + Sbjct: 1 MNTKIRLGLCQMT-VSDKKKDNLEKALSMLEECSKQGADIAILPEMFICPYDTKLFPLYA 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILD-AGNIIAVRDK---- 114 ++ S + + IV G P + + NS V+ D GN IA K Sbjct: 60 ENVEN-SKTLSVISKSAKYNNMYIVAGTIPESNNGFIYNSSVMFDRQGNTIAKHRKVHLF 118 Query: 115 -INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-- 171 IN+ + F E +G S +G+ IC D+ + + + + ++GA+ + Sbjct: 119 DINVKDGISFRESDVLTAGRSVTVAETEFGCIGLAICFDM-RFAGLYSEMTEKGAKIIIT 177 Query: 172 ---FSLNASPYYHNKLKKRHEIVTGQISHVHL 200 F++ P H +L R + Q+ HV + Sbjct: 178 PASFNMTTGP-AHWELLVRARALDNQVFHVAV 208 >gi|164688802|ref|ZP_02212830.1| hypothetical protein CLOBAR_02449 [Clostridium bartlettii DSM 16795] gi|164602278|gb|EDQ95743.1| hypothetical protein CLOBAR_02449 [Clostridium bartlettii DSM 16795] Length = 307 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 29/47 (61%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K+A+ Q PV+ D + K + +EA + +DLI+F ELFI GYP Sbjct: 9 KVALVQAAPVMFDKKVGVEKTVKLIKEAGEKDVDLIVFPELFIPGYP 55 >gi|225716822|gb|ACO14257.1| Nitrilase homolog 2 [Esox lucius] Length = 284 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 19/207 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K ++A+ QL+ V A N+++AR +EA R+G +++ E F S Y F Sbjct: 8 MSKFRLAVIQLH-VTKVKADNLSRARGLVKEAAREGAKIVVLPECFNSPYGSS---FFPE 63 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVIL--DAGNIIAVRD---- 113 + + + S+ VG P +D + N+ + D G ++ R Sbjct: 64 YAEKIPGESSQVLSEVAKENRVFPVGGSLPEEDTGKLYNTCPVFGPDGGLLLKHRKIHLF 123 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-- 171 I++P F E T G S ++G+ IC D+ + + + + K+G + L Sbjct: 124 DIDVPGKIRFQESETLSPGSSLSVFETPYCKVGVGICYDM-RFAELAQLYTKKGCQLLVY 182 Query: 172 ---FSLNASPYYHNKLKKRHEIVTGQI 195 F++ P H +L +R + Q+ Sbjct: 183 PGAFNMTTGP-AHWELLQRARALDNQV 208 >gi|147676587|ref|YP_001210802.1| ATP-utilizing enzymes [Pelotomaculum thermopropionicum SI] gi|146272684|dbj|BAF58433.1| ATP-utilizing enzymes [Pelotomaculum thermopropionicum SI] Length = 269 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 ++ V++ SGG+DS AVDAL KE + + + P E+AA A+ LG + Sbjct: 16 KSYGSVLVAFSGGVDSTFVLKAAVDAL-KEKAVAVTITGELYPPGETEEAARLARFLGAE 74 Query: 350 YDVLPIHDLVNHFFS 364 + ++ DL N F+ Sbjct: 75 HIIIENRDLDNPTFA 89 >gi|331702548|ref|YP_004399507.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lactobacillus buchneri NRRL B-30929] gi|329129891|gb|AEB74444.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lactobacillus buchneri NRRL B-30929] Length = 261 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 15/226 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKS 61 K+KIA+AQL+ GD N A+ ++A Q D+++F E++ +GY L V K+ Sbjct: 2 KIKIALAQLDITFGDPDENFAQIEPNVQKAAEQSADIVVFPEMWNTGYDLTRLGQVADKN 61 Query: 62 --FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLP 118 QA + T GG+ + N+ I G ++ DK++L Sbjct: 62 GQRTQALLGKLAKKYQMTIHGGS-----VSTEKNGAFYNTTYIFGLDGKLLTTYDKVHL- 115 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + HE SG + + I +IC DI + + L + LF P Sbjct: 116 -FGLMHEDEYLASGVEENHFQIKGIDAASVICYDI-RFPEWLRTLSLDDSRILFVPAEWP 173 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +++ + ++ + ++ VN+VG + F G S ++ Sbjct: 174 --TSRIPQWRRLLAARAIENQSFVVAVNRVGSDPDNPFGGHSGIYN 217 >gi|119946811|ref|YP_944491.1| NAD synthetase [Psychromonas ingrahamii 37] gi|189083403|sp|A1SZH7|NADE_PSYIN RecName: Full=NH(3)-dependent NAD(+) synthetase gi|119865415|gb|ABM04892.1| NH(3)-dependent NAD(+) synthetase [Psychromonas ingrahamii 37] Length = 276 Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust. Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 40/246 (16%) Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT-------- 323 EE + + ++ +Q+ + +++G+SGG+DS+ + A+ + N T Sbjct: 17 EEIEIKRRINFIKKKLQQAECYTLVLGISGGVDSSTAGRLCQLAVEQLNQSTDTDKYQFI 76 Query: 324 -IMLPYKYTSPQSLEDAAACAK---------ALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 + LPY + Q ED A A + K IH+ S L + Sbjct: 77 AVRLPY---AIQKDEDEAQLALQFIRPSHVITINIKNGADGIHESTLAALQTSSVNLSAD 133 Query: 374 PS-GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 + + N+++R+R ++ + +++ T + +E G+ T +GD + PL L Sbjct: 134 TNIDFIKGNVKARMRMIAQYEIAGLTGGLVVGTDHSAENITGFYTKHGDGACDLAPLFGL 193 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPI 488 K Q+ LA LG P ++EK+P+A+L +P D+ +L Y Sbjct: 194 NKRQIRALAKQ---------LGA-----PAILIEKAPTADLEEDKPQLQDEHALGITYDQ 239 Query: 489 LDDIIK 494 +DD ++ Sbjct: 240 IDDFLE 245 >gi|325688764|gb|EGD30773.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK115] gi|327462437|gb|EGF08762.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK1057] Length = 274 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLKKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDN 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + DV L ++ + M++ ++ + Sbjct: 75 GYRFIAVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTKAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|227502979|ref|ZP_03933028.1| NAD(+) synthase (glutamine-hydrolyzing) [Corynebacterium accolens ATCC 49725] gi|227076040|gb|EEI14003.1| NAD(+) synthase (glutamine-hydrolyzing) [Corynebacterium accolens ATCC 49725] Length = 273 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 31/239 (12%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQTI 324 P + E + V L +Y++ + ++G+SGG DS L + AV+ + + Sbjct: 23 PFIDPEEEIARRVDFLVEYLEMTHAKGYVLGISGGQDSTLAGKLTQLAVERVKGAEFWAV 82 Query: 325 MLPYKYTSPQSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA 379 LP+ Q+ ED A A D+ P ++H + Q+ + Sbjct: 83 RLPH---GTQADEDDAQIALDFIQPDRRLTVDIQPATAALSH--EVARAVGQDSLNDFNR 137 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N ++R+R A++ A+++ T + +E + T +GD + PL L K Sbjct: 138 GNAKARLRMTAQYAIAGEVGALVVGTDHAAENVTAFYTKWGDGAADLLPLAGLNK----- 192 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG P S K P+A+L +P D+E+L Y +DD ++ Sbjct: 193 ----RQGAALLKHLG-----APESTWSKVPTADLEDDKPQLPDEEALGVTYAHIDDYLE 242 >gi|146282194|ref|YP_001172347.1| NAD synthetase [Pseudomonas stutzeri A1501] gi|189083402|sp|A4VKK4|NADE_PSEU5 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|145570399|gb|ABP79505.1| NH3-dependent NAD synthetase [Pseudomonas stutzeri A1501] Length = 275 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 35/217 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ---------TIMLPYKYTSP 333 ++ ++++ +++G+SGG+DS +A A+ + LPY+ Sbjct: 35 IQSCLRESGMKTLVLGISGGVDSTTAGLLAQRAVEGMRAAGEGDHYRFIAVRLPYQV--- 91 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS-----QFLQEEPSGIVAENIQSRIRG 388 Q E A A K D ++ L + + L E V N ++R+R Sbjct: 92 QHDEHEAQLAVDT-IKPDECHTVNIGTAVLGLAAATEALEPLSPEQRDFVLGNTKARMRM 150 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 ++N + +++ T + +E +G+ T +GD + PL L K QV Q+A+ + Sbjct: 151 VAQYTIANARQGLVIGTDHAAEAVMGFFTKFGDGACDLTPLAGLVKDQVRQIAAALGA-- 208 Query: 449 ITSGLGPLTEVIPPSILEKSPSA---ELRPHQTDQES 482 P ++ K P+A EL P + D+ + Sbjct: 209 ------------PEQLVHKVPTADLEELSPGKPDEAA 233 >gi|253582983|ref|ZP_04860201.1| nitrilase [Fusobacterium varium ATCC 27725] gi|251835189|gb|EES63732.1| nitrilase [Fusobacterium varium ATCC 27725] Length = 313 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 30/50 (60%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KK KIA+ Q P++ D KA + +EA + +LI+F ELFI GYP Sbjct: 13 KKCKIAVVQAAPIMFDKELCTKKAIKLIQEAAEKHSELIVFPELFIPGYP 62 >gi|262341326|ref|YP_003284181.1| NAD+ synthase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272663|gb|ACY40571.1| NAD+ synthase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 258 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPL 429 + E S + N+Q+R+R L +N +++ T NK E VG+ T YGD +P+ Sbjct: 101 KNEKSSLALANVQARLRMLTLYYYANMKNYLVVGTGNKVEDFGVGFFTKYGDGGVDLHPI 160 Query: 430 KDLYKTQVFQLA 441 DL K++V LA Sbjct: 161 ADLTKSEVRFLA 172 >gi|237739968|ref|ZP_04570449.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fusobacterium sp. 2_1_31] gi|229421985|gb|EEO37032.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fusobacterium sp. 2_1_31] Length = 263 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 41/202 (20%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------P 53 KK KIA+AQ+ +I N K EEA ++ +D+I F EL GY P Sbjct: 7 KKFKIALAQIKIEQKNIEENCKKIFEKIEEAAKENVDIICFPELATIGYTITTDELKKLP 66 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF-----PRQDQEGVLNSVVILDAGNI 108 ED F +FI+ K H I+VG+ ++ ++ + + I D G I Sbjct: 67 ED--FNNTFIEKLQEKAKFFK--IH-----ILVGYLESKTTKKSRDFYNSCIFIDDNGKI 117 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDI-WKNSNICKHLK 164 +A K L EK F +G + V ++ ++GIL+C D+ + + LK Sbjct: 118 LANARKFYLWK----KEKTKFKAG---NKFVVKNTKFGKIGILLCYDLEFPEPARIECLK 170 Query: 165 KQGAEFLF-----SLNASPYYH 181 GAE +F S NA +H Sbjct: 171 --GAEIIFVPSLWSFNAENRWH 190 >gi|294782937|ref|ZP_06748263.1| delta-aminovaleramide aminohydrolase [Fusobacterium sp. 1_1_41FAA] gi|294481578|gb|EFG29353.1| delta-aminovaleramide aminohydrolase [Fusobacterium sp. 1_1_41FAA] Length = 263 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 41/197 (20%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------PEDLVF 58 A+AQ+ +I GN K + EEA ++ +D+I F EL GY PED F Sbjct: 12 ALAQMKIEQKNIEGNCKKILKKIEEAAKENVDIICFPELATIGYTITTDELQNLPED--F 69 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGF-----PRQDQEGVLNSVVILDAGNIIAVRD 113 + +FI+ K H I+VG+ ++ ++ + + I D G I+A Sbjct: 70 ENTFIEKLQEKARLFK--IH-----ILVGYLESKTTKKSRDFYNSCIFIDDEGKILANAR 122 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDI-WKNSNICKHLKKQGAE 169 K+ L EK F +G + V ++ ++GIL+C D+ + + LK GAE Sbjct: 123 KVYLWK----KEKTKFKAG---NKFVVKNTKFGKIGILLCYDLEFPEPARIECLK--GAE 173 Query: 170 FLF-----SLNASPYYH 181 +F S NA +H Sbjct: 174 IIFVPSLWSFNAENRWH 190 >gi|227825059|ref|ZP_03989891.1| predicted protein [Acidaminococcus sp. D21] gi|226905558|gb|EEH91476.1| predicted protein [Acidaminococcus sp. D21] Length = 99 Score = 42.7 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 40/76 (52%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++KIA AQ+ G N+ +A EEA R +D+++F E I GY DL +++F+ Sbjct: 2 EIKIACAQVEVRPGRPEINLRRALETIEEAKRASIDILIFPEQLIPGYLLGDLWEQRAFL 61 Query: 64 QACSSAIDTLKSDTHD 79 + C L + T D Sbjct: 62 RDCRDYGKDLIAATQD 77 >gi|152993701|ref|YP_001359422.1| hydrolase [Sulfurovum sp. NBC37-1] gi|151425562|dbj|BAF73065.1| hydrolase [Sulfurovum sp. NBC37-1] Length = 290 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 17/158 (10%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 +VV GNI K+++P+ F+EK F G +PI +LG+L+C D W Sbjct: 96 TAVVFEKDGNIAGKYRKMHIPDDPGFYEKFYFTPGDLGFEPIETSVGKLGVLVCWDQWY- 154 Query: 157 SNICKHLKKQGAEFLFSLNASPYY-----HNKLKKRHEIVTGQISHV---HLPIIYVNQV 208 + + +GA+ L A ++ K ++ +T Q SH +P++ N+V Sbjct: 155 PEAARIMALKGAQLLIYPTAIGWFDEDTDKEKARQLDSWITIQRSHAIANGIPVLSCNRV 214 Query: 209 GGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQ 239 G + + + F G SF Q ++ Q +EQ Sbjct: 215 GFEPDGSGVLNGIRFWGNSFICGAQGEILAQADGENEQ 252 >gi|28869659|ref|NP_792278.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. tomato str. DC3000] gi|28852901|gb|AAO55973.1| hydrolase, carbon-nitrogen family [Pseudomonas syringae pv. tomato str. DC3000] Length = 249 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 20/209 (9%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI--Q 64 +A AQ + G + N+A + A G D +LF EL ++GY P DL + + Sbjct: 6 LAAAQFCSIRGQLKHNLAGHLAFMQRAADLGADYLLFPELSLTGYEP-DLAHELALSPND 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNYSE 122 AC I L VG P + G + ++ G++IA + P Sbjct: 65 ACLEPIRALAMHLQ---LMTTVGVPLKGPGGSIEVGALTFTAHGDVIAYAKQYLHPG--- 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP--YY 180 E F G + + R+G+ +C D ++ + + + S+ SP Y Sbjct: 119 --EDAVFSPGSEDCYLQLNQHRIGLCVCADFSHPEHVQRLSEGGSGVYAASVLISPGGYA 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 H+ E++ G LP++ N G Sbjct: 177 HDS-----ELLAGHARRHRLPVLIANHGG 200 >gi|23097842|ref|NP_691308.1| NAD synthetase [Oceanobacillus iheyensis HTE831] gi|46396444|sp|Q8ET75|NADE_OCEIH RecName: Full=NH(3)-dependent NAD(+) synthetase gi|22776066|dbj|BAC12343.1| NH3-dependent NAD synthetase [Oceanobacillus iheyensis HTE831] Length = 275 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 30/237 (12%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAA---IAVDALGKEN----VQTIMLPYKYTSPQ 334 L+ Y++K+ F ++G+SGG DS L + IAV+ L +EN Q I + Y + Sbjct: 31 LKSYLKKHTFSTGYVLGMSGGQDSTLLSKLTQIAVNELNEENSTNTYQFIGMKLPYGVQK 90 Query: 335 SLEDAAACAKALG-CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +D K + K + I + V+ + E S + N ++R R + Sbjct: 91 DADDVDDAIKFVEPSKVLTVNIKESVDASVKALDG-AGVEISDFLKGNEKARERMKAQYS 149 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 ++ +L T + +E G+ T +GD + PL L K Q Q+ N Sbjct: 150 VAGAFNCFVLGTDHAAEAVTGFYTKHGDGACDLAPLFGLNKRQGKQMLVALN-------- 201 Query: 454 GPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESFI 504 P + K P+A+L RP D+E+L Y +D+ + K + E+ + I Sbjct: 202 ------CPEHLYNKKPTADLEDDRPALPDEEALGVTYEQIDEFLEGKEVAEDSKRTI 252 >gi|326382611|ref|ZP_08204302.1| carbon-nitrogen family hydrolase [Gordonia neofelifaecis NRRL B-59395] gi|326198730|gb|EGD55913.1| carbon-nitrogen family hydrolase [Gordonia neofelifaecis NRRL B-59395] Length = 298 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 20/199 (10%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTE--LFISGYPPEDLVFKK 60 + LKI + Q + D+A N A A R E A G +++ E L + ++ ++ Sbjct: 6 RSLKIGLTQWHATT-DVAANTAVALRVIERAAADGARIVVLPENGLMLG----SNVAMRE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILD-AGNIIAVRDKINLP 118 + A S I L+ G +VVG + +GV NS +++D +G I+ DKI+L Sbjct: 61 AAFDADSPTIAALRDAAARLGVVLVVGGLKNSTPDGVFNSALVIDRSGQIVGRYDKIHLF 120 Query: 119 NYS----EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 + + F +G + + +R+G+LIC D+ + + + L GAE L Sbjct: 121 DANIGGQSFEASSVERAGAAPTLLDVDGVRIGMLICYDV-RFPELSRELAAAGAEVLLVP 179 Query: 175 NA------SPYYHNKLKKR 187 +A ++H L+ R Sbjct: 180 SAFVQSTGEAHWHTLLRAR 198 >gi|237742225|ref|ZP_04572706.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fusobacterium sp. 4_1_13] gi|229429873|gb|EEO40085.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Fusobacterium sp. 4_1_13] Length = 263 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 41/202 (20%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------P 53 KK KIA+AQ+ +I N K EEA ++ +D+I F EL GY P Sbjct: 7 KKFKIALAQIKIEQKNIEENCKKIFEKIEEAAKENVDIICFPELATIGYTITTDELKKLP 66 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGF-----PRQDQEGVLNSVVILDAGNI 108 ED F +FI+ K H ++VG+ ++ ++ + + I D G I Sbjct: 67 ED--FNNAFIEKLQEKAKFFK--IH-----LLVGYLESKTTKKSRDFYNSCIFIDDDGKI 117 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDI-WKNSNICKHLK 164 +A K+ L EK F +G + V ++ ++GIL+C D+ + + LK Sbjct: 118 LANARKVYLWK----REKTKFKAG---NKFVVKNTKFGKIGILLCYDLEFPEPARIECLK 170 Query: 165 KQGAEFLF-----SLNASPYYH 181 GAE +F S NA +H Sbjct: 171 --GAEIIFVPSLWSFNAENRWH 190 >gi|171318213|ref|ZP_02907377.1| NAD+ synthetase [Burkholderia ambifaria MEX-5] gi|171096607|gb|EDT41500.1| NAD+ synthetase [Burkholderia ambifaria MEX-5] Length = 282 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 26/225 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ + ++G+SGG+DS+ A +AV+ L + + + P ++ D Sbjct: 36 LAQYLRSSGLRTYVLGISGGVDSSTAGRLAQLAVEQLRAGGYEARFIAMRL--PNGVQND 93 Query: 339 AAACAKALGC-------KYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 94 EADAQRALAFVRADETFTVDVKPAADAMLASLVASGHAFETPAQQDFVHGNIKARERMIA 153 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + +++ T + +E +G+ T +GD PL L K +V +A + Sbjct: 154 QYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADVLPLAGLSKRRVRAVARALGGDEL- 212 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 + +P + LE ELRP + D+ + Y +DD ++ Sbjct: 213 -----IVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDDFLE 247 >gi|307704471|ref|ZP_07641381.1| NH3-dependent NAD+ synthetase [Streptococcus mitis SK597] gi|307621991|gb|EFO01018.1| NH3-dependent NAD+ synthetase [Streptococcus mitis SK597] Length = 274 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 28/240 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A + + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLTMEELRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 YK+ + P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYKFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARSRMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 L L E+ P++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 195 L---------------LQELGADPALYEKIPTADLEEDKPGLADEVALGVTYEEIDDYLE 239 >gi|282866187|ref|ZP_06275234.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces sp. ACTE] gi|282558971|gb|EFB64526.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces sp. ACTE] Length = 265 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 26/201 (12%) Query: 40 LILFTELFISGYP-PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN 98 L++ +ELF++GY +DL S+ + H G ++ G+P + E V N Sbjct: 39 LLVCSELFLTGYALGDDLPSLAEPADGPSAQAVSELCARH--GIAVLYGYPERSGELVFN 96 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIV---FRDIRLGILIC 150 + ++ D L +Y + H E+R F G + P+V +R+G+LIC Sbjct: 97 ATRLVGP-------DGTALADYRKTHLFGPFEQRWFTPG--DRPVVQAELDGVRIGLLIC 147 Query: 151 EDIWKNSNICKH-LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 D+ N+ H L G + + PY +V + + I YVN+ G Sbjct: 148 YDVEFPENVRAHALAGTGLLLVPTALMHPYPFVA----ESVVPVRAFENQMYIAYVNRTG 203 Query: 210 GQDELIFDGASFCFDGQQQLA 230 + E F G S C G A Sbjct: 204 PEGEFEFIGLS-CLAGPDGTA 223 >gi|86132521|ref|ZP_01051115.1| carbon-nitrogen hydrolase [Dokdonia donghaensis MED134] gi|85817082|gb|EAQ38266.1| carbon-nitrogen hydrolase [Dokdonia donghaensis MED134] Length = 319 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 33/129 (25%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP----------PE 54 LK+A+AQ+ PV GD I K + A EA +LI+F E + GYP + Sbjct: 7 LKVALAQIAPVWGDRDATIEKIKTAIIEAASNDAELIVFGEGLLPGYPYWLSLTDGAAWD 66 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHD-----------------------GGAGIVVGFPRQ 91 V K+ +A+D + D + GGA + Sbjct: 67 TKVVKELHAHYTRNAVDIERGDLQEICDLAQNYNIAIYLGIIEKPMDRGGASLYCSLVYI 126 Query: 92 DQEGVLNSV 100 DQEGV+ SV Sbjct: 127 DQEGVIQSV 135 >gi|259909136|ref|YP_002649492.1| Putative hydrolase [Erwinia pyrifoliae Ep1/96] gi|224964758|emb|CAX56275.1| Putative hydrolase [Erwinia pyrifoliae Ep1/96] gi|283479164|emb|CAY75080.1| Aliphatic amidase [Erwinia pyrifoliae DSM 12163] Length = 263 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%) Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIW 154 V N+++++ G IIA DK++L + E R +G P+V D I +G++ C DI Sbjct: 93 VFNALIVIRQGRIIARYDKLHLYDAFTLQESRNVTAGDRIPPLVDVDGINVGLMTCYDI- 151 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 + + + L GA+ L + S + LK+ H Sbjct: 152 RFPELARRLALDGADLL--VLPSAWVRGPLKEMH 183 >gi|125718661|ref|YP_001035794.1| NAD synthetase [Streptococcus sanguinis SK36] gi|189030735|sp|A3CPY9|NADE_STRSV RecName: Full=NH(3)-dependent NAD(+) synthetase gi|125498578|gb|ABN45244.1| NH(3)-dependent NAD(+) synthetase, putative [Streptococcus sanguinis SK36] Length = 274 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLKKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDN 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q ED A A A + DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPY---GVQVDEDDAQKALAF-IQADVSLTVN--IKESADAMTKAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|301386240|ref|ZP_07234658.1| hydrolase, carbon-nitrogen family protein [Pseudomonas syringae pv. tomato Max13] gi|302134415|ref|ZP_07260405.1| hydrolase, carbon-nitrogen family protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 253 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 20/209 (9%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI--Q 64 +A AQ + G + N+A + A G D +LF EL ++GY P DL + + Sbjct: 10 LAAAQFCSIRGQLKHNLAGHLAFMQRAADLGADYLLFPELSLTGYEP-DLAHELALSPND 68 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNYSE 122 AC I L VG P + G + ++ G++IA + P Sbjct: 69 ACLEPIRALAMHLQ---LMTTVGVPLKGPGGSIEVGALTFTAHGDVIAYAKQYLHPG--- 122 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP--YY 180 E F G + + R+G+ +C D ++ + + + S+ SP Y Sbjct: 123 --EDAVFSPGSEDCYLQLNQHRIGLCVCADFSHPEHVQRLSEGGSGVYAASVLISPGGYA 180 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 H+ E++ G LP++ N G Sbjct: 181 HDS-----ELLAGHARRHRLPVLIANHGG 204 >gi|284161890|ref|YP_003400513.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Archaeoglobus profundus DSM 5631] gi|284011887|gb|ADB57840.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Archaeoglobus profundus DSM 5631] Length = 231 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 21/174 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I +AQL + ++ N+ R+A + + D+++F ELF +GY E++ Sbjct: 1 MRIGLAQLR--LENMDKNV---RKALDLLRKSKADVVVFPELFNTGYNLENI-------- 47 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S L + + A I+ G P + N+ +++ G I+ K L + + Sbjct: 48 -SKSDPKFLIEASKETKAVIIAGIPEKGY----NTALVIHRGKILGRHRKTKL--FPLLN 100 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 E + F +G PI GI+IC ++ + I + L +GA+ LF + P Sbjct: 101 EHKIFKAGKVVKPIETPFGLFGIMICYEL-RFPEIARKLVNKGAKILFVIAQFP 153 >gi|302550101|ref|ZP_07302443.1| N-carbamoylputrescine amidase [Streptomyces viridochromogenes DSM 40736] gi|302467719|gb|EFL30812.1| N-carbamoylputrescine amidase [Streptomyces viridochromogenes DSM 40736] Length = 262 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 21/189 (11%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 L++ E+F++GY D + + + A D + G I G+P +D + V NS Sbjct: 36 LLVTPEMFLTGYAIGDDIGRLA-EPADGHRADAIAEIASSHGLAIAYGYPERDGDAVFNS 94 Query: 100 VVILDAGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIVFRDI---RLGILICE 151 ++ A D L NY + H E+ F G + +V +I R+GILIC Sbjct: 95 AQLISA-------DGTRLANYRKTHLFGCFERDHFHPG--DRTVVQTEIDGLRVGILICY 145 Query: 152 DIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ 211 D+ N+ H G + L A + + + ++ + + + YVN+ G + Sbjct: 146 DVEFPENVRAH-ALAGTDLLVVPTAQMHPFQFVAE--SLIPVRAFENQMYVAYVNRAGQE 202 Query: 212 DELIFDGAS 220 E F G S Sbjct: 203 GEFEFVGLS 211 >gi|90419428|ref|ZP_01227338.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90336365|gb|EAS50106.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 262 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 7/217 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q++ + A + R+ E+A G DL + EL +GY + + + Sbjct: 1 MKVAVIQMDAAMTGAADRHSAILRSLEDAAAAGADLAVLPELAPTGYGAGQTIADTA--K 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + + G I +G + +GV N+ ++ G + K L Y ++ Sbjct: 59 DADAGLAEWQDASDRLGIAIAMGLAIRMAQGVDNAAALIAPGRAPVLYAKRML--YGDY- 115 Query: 125 EKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EK F G + PIV +R G+L+C D+ + +C+ L +GAE + A P Sbjct: 116 EKGLFRPGDAPSPIVEIAGLRCGLLVCFDV-EFPELCRDLALRGAEAIIVPTALPRSEGA 174 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +V + L ++Y + G + G S Sbjct: 175 RFIAQNVVPVRAFENQLFVVYADHCGSDGSFAYQGLS 211 >gi|148256113|ref|YP_001240698.1| aliphatic nitrilase [Bradyrhizobium sp. BTAi1] gi|146408286|gb|ABQ36792.1| Aliphatic nitrilase [Bradyrhizobium sp. BTAi1] Length = 345 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 22/165 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K K+A+ Q P D+ +I K EEA +G LI F E+FI GYP Sbjct: 7 KYKVAVVQAAPAWLDLDASIKKTIALIEEAADKGAKLIAFPEVFIPGYPWHIWMDSPAWC 66 Query: 58 FKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNI 108 + F+Q S + L++ V+G +D + + ++ A G Sbjct: 67 IGRGFVQRYFDNSLAYDSPQAEALRAAVRKAQLTAVLGLSERDGGSLYIAQWLIGADGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFR--DI-RLGILIC 150 IA R K+ P ++ E+ + G +D V DI R+G L C Sbjct: 127 IAKRRKLR-PTHA---ERTVYGEGDGSDLAVHERPDIGRIGALCC 167 >gi|69245343|ref|ZP_00603387.1| NAD+ synthase [Enterococcus faecium DO] gi|257880009|ref|ZP_05659662.1| NAD synthase [Enterococcus faecium 1,230,933] gi|257882244|ref|ZP_05661897.1| NAD synthase [Enterococcus faecium 1,231,502] gi|257891099|ref|ZP_05670752.1| NAD synthase [Enterococcus faecium 1,231,410] gi|257893913|ref|ZP_05673566.1| NAD synthase [Enterococcus faecium 1,231,408] gi|258614662|ref|ZP_05712432.1| NAD synthetase [Enterococcus faecium DO] gi|260560378|ref|ZP_05832554.1| NAD synthase [Enterococcus faecium C68] gi|293563009|ref|ZP_06677475.1| NAD+ synthetase [Enterococcus faecium E1162] gi|294623094|ref|ZP_06701980.1| NAD+ synthetase [Enterococcus faecium U0317] gi|314938341|ref|ZP_07845633.1| NAD+ synthetase [Enterococcus faecium TX0133a04] gi|314941782|ref|ZP_07848658.1| NAD+ synthetase [Enterococcus faecium TX0133C] gi|314948686|ref|ZP_07852060.1| NAD+ synthetase [Enterococcus faecium TX0082] gi|314952551|ref|ZP_07855547.1| NAD+ synthetase [Enterococcus faecium TX0133A] gi|314992283|ref|ZP_07857719.1| NAD+ synthetase [Enterococcus faecium TX0133B] gi|314997494|ref|ZP_07862441.1| NAD+ synthetase [Enterococcus faecium TX0133a01] gi|68195873|gb|EAN10308.1| NAD+ synthase [Enterococcus faecium DO] gi|257814237|gb|EEV42995.1| NAD synthase [Enterococcus faecium 1,230,933] gi|257817902|gb|EEV45230.1| NAD synthase [Enterococcus faecium 1,231,502] gi|257827459|gb|EEV54085.1| NAD synthase [Enterococcus faecium 1,231,410] gi|257830292|gb|EEV56899.1| NAD synthase [Enterococcus faecium 1,231,408] gi|260073723|gb|EEW62049.1| NAD synthase [Enterococcus faecium C68] gi|291597463|gb|EFF28628.1| NAD+ synthetase [Enterococcus faecium U0317] gi|291604923|gb|EFF34391.1| NAD+ synthetase [Enterococcus faecium E1162] gi|313588503|gb|EFR67348.1| NAD+ synthetase [Enterococcus faecium TX0133a01] gi|313593188|gb|EFR72033.1| NAD+ synthetase [Enterococcus faecium TX0133B] gi|313595320|gb|EFR74165.1| NAD+ synthetase [Enterococcus faecium TX0133A] gi|313599398|gb|EFR78241.1| NAD+ synthetase [Enterococcus faecium TX0133C] gi|313642339|gb|EFS06919.1| NAD+ synthetase [Enterococcus faecium TX0133a04] gi|313644939|gb|EFS09519.1| NAD+ synthetase [Enterococcus faecium TX0082] Length = 274 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 86/219 (39%), Gaps = 39/219 (17%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIA-------VDALGKENVQTIMLPYKYTSPQ 334 ++ Y++K F K ++G+SGG DS L +A + EN Q I + Y Sbjct: 30 MKAYLKKYPFLKTFVLGISGGQDSTLAGRLAQLTMEEMREETKDENYQFIAVRLPYGEQA 89 Query: 335 SLEDAAAC----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---AENIQSRIR 387 EDA A + + ++ P D Q L E GI NI++R R Sbjct: 90 DEEDAKAALDFIQPDVSLRVNIKPAVDA-------QVQVLSEAGVGISDFNKGNIKARQR 142 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ +L T + +E G+ T +GD PL L K Q QL N+ Sbjct: 143 MITQYAVAGERAGAVLGTDHAAENITGFFTKFGDGGADILPLFRLDKRQGKQLLQALNA- 201 Query: 448 GITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 P + K P+A+L +P D+ +L Sbjct: 202 -------------PEKLYTKIPTADLEDGKPMIADEVAL 227 >gi|309808861|ref|ZP_07702742.1| NAD+ synthase [Lactobacillus iners LactinV 01V1-a] gi|309809409|ref|ZP_07703271.1| NAD+ synthase [Lactobacillus iners SPIN 2503V10-D] gi|312870809|ref|ZP_07730915.1| NAD+ synthase [Lactobacillus iners LEAF 3008A-a] gi|315653840|ref|ZP_07906756.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus iners ATCC 55195] gi|308167859|gb|EFO69996.1| NAD+ synthase [Lactobacillus iners LactinV 01V1-a] gi|308170320|gb|EFO72351.1| NAD+ synthase [Lactobacillus iners SPIN 2503V10-D] gi|311093685|gb|EFQ52023.1| NAD+ synthase [Lactobacillus iners LEAF 3008A-a] gi|315488536|gb|EFU78182.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus iners ATCC 55195] Length = 287 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 56/268 (20%) Query: 283 LRDYVQKN-NFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L++Y+ KN ++G+SGG DS L +A A+ + +T + LPY Sbjct: 31 LKEYLLKNPGLKTYVLGISGGQDSTLTGKLAQMAISELRAETGDNEYQFIAVRLPYGVQK 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAE-----NIQSRI 386 S A + DL+ + S + ++ E SGI NI++R Sbjct: 91 DASDAADAVAFQHAD--------QDLIVNIKSAVDATVKSLEESGIEISDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ +K ++ T + +E G+ T YGD + P+ L K Q Sbjct: 143 RMIVQYAIAGANKGAVIGTDHAAENISGFFTKYGDGASDILPIFRLNKRQ---------- 192 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEE 501 G L E+ P + +K+P+A+L RP D+++L Y +DD ++ Sbjct: 193 -----GKALLQELNCPKHLYQKAPTADLEEKRPALPDEQALGVSYDKIDDYLE------- 240 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E +E+L SE+KR Sbjct: 241 -----GKELAKVDAERIEYLWTRSEHKR 263 >gi|189500660|ref|YP_001960130.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides BS1] gi|189496101|gb|ACE04649.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chlorobium phaeobacteroides BS1] Length = 289 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 26/243 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++IA+ Q++ + N+ KA EA G +I ELF + Y E Sbjct: 1 MSDSVRIALVQMSGER-EPGANLNKACARITEAAAGGAKIICLQELFTTRYFCQTEEYEP 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRD 113 ++ + + L ++ H+ IV + +G+ N+ ++DA G+ + Sbjct: 60 FGHAETVPGPTTGVLQQLAAE-HE--VVIVASLFEKRAKGLYHNTAAVIDADGSFMGKYR 116 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 K+++P+ F+EK F G + R +G+LIC D W + GAE LF Sbjct: 117 KMHIPDDPGFYEKFYFTPGDLGYRVFNTRYAAIGVLICWDQW-FPEAARLTALMGAEILF 175 Query: 173 SLNASPYYHNKLKKRHEIVTGQI--------SHVHLPIIYV---NQVGGQDELIFDGASF 221 A + ++ E+ + Q+ SH +YV N+VG +D+L F G SF Sbjct: 176 YPTAIGWAMSETSD--EVRSSQLDAWKTIQRSHAIANGVYVAVANRVGTEDKLRFWGNSF 233 Query: 222 CFD 224 D Sbjct: 234 VSD 236 >gi|312873098|ref|ZP_07733157.1| NAD+ synthase [Lactobacillus iners LEAF 2062A-h1] gi|312873428|ref|ZP_07733479.1| NAD+ synthase [Lactobacillus iners LEAF 2052A-d] gi|325911449|ref|ZP_08173861.1| NAD+ synthase [Lactobacillus iners UPII 143-D] gi|329920477|ref|ZP_08277209.1| NAD+ synthase [Lactobacillus iners SPIN 1401G] gi|311091112|gb|EFQ49505.1| NAD+ synthase [Lactobacillus iners LEAF 2052A-d] gi|311091331|gb|EFQ49716.1| NAD+ synthase [Lactobacillus iners LEAF 2062A-h1] gi|325476799|gb|EGC79953.1| NAD+ synthase [Lactobacillus iners UPII 143-D] gi|328936153|gb|EGG32606.1| NAD+ synthase [Lactobacillus iners SPIN 1401G] Length = 278 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 56/268 (20%) Query: 283 LRDYVQKN-NFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L++Y+ KN ++G+SGG DS L +A A+ + +T + LPY Sbjct: 31 LKEYLLKNPGLKTYVLGISGGQDSTLTGKLAQMAISELRAETGDNEYQFIAVRLPYGVQK 90 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAE-----NIQSRI 386 S A + DL+ + S + ++ E SGI NI++R Sbjct: 91 DASDAADAVAFQHAD--------QDLIVNIKSAVDATVKSLEESGIEISDFNKGNIKARQ 142 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R + A++ +K ++ T + +E G+ T YGD + P+ L K Q Sbjct: 143 RMIVQYAIAGANKGAVIGTDHAAENISGFFTKYGDGASDILPIFRLNKRQ---------- 192 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEE 501 G L E+ P + +K+P+A+L RP D+++L Y +DD ++ Sbjct: 193 -----GKALLQELNCPKHLYQKAPTADLEEKRPALPDEQALGVSYDKIDDYLE------- 240 Query: 502 SFINNDQEYNDETVRYVEHLLYGSEYKR 529 +E +E+L SE+KR Sbjct: 241 -----GKELAKVDAERIEYLWTRSEHKR 263 >gi|288559860|ref|YP_003423346.1| N-carbamoyl-D-amino acid amidohydrolase AguB [Methanobrevibacter ruminantium M1] gi|288542570|gb|ADC46454.1| N-carbamoyl-D-amino acid amidohydrolase AguB [Methanobrevibacter ruminantium M1] Length = 281 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 32/217 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K+KIA+ Q+N VV + NI KA +E+ +QG DL + E+F Y E Sbjct: 1 MNKIKIALCQMN-VVDNKDENIKKAIEMIKESKKQGADLAILPEMFNCPYENE------K 53 Query: 62 FIQACSSAID--TLKSDTHDGGAGIVVGFPRQDQEGVLN-----------SVVILDAGNI 108 FI+ + D TLKS + + E VLN SV + G I Sbjct: 54 FIKYGETLEDSRTLKSISETANEENIYVLAGSVPELVLNDSSNENNLYNTSVFFDNEGKI 113 Query: 109 IAVRDK-----INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 + K I++ + F E T +G I R+GI IC DI + + + L Sbjct: 114 LGKHRKVHLFDIDIKDKIYFKESDTLSAGDDFTIIKTPFARIGIGICYDI-RFVELSRIL 172 Query: 164 KKQGAEFL-----FSLNASPYYHNKLKKRHEIVTGQI 195 GAE L F+L P H +L R + Q+ Sbjct: 173 ALNGAEILIFPGAFNLTTGP-AHWELLFRSRALDNQV 208 >gi|240137020|ref|YP_002961489.1| putative nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methylobacterium extorquens AM1] gi|240006986|gb|ACS38212.1| putative nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methylobacterium extorquens AM1] Length = 358 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 27/191 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ A Q+ P + G + + A ++A +G ++F E F+ YP Sbjct: 7 VRAAAVQVAPDLDRPDGTLERVLNAIDDAAAKGARFMVFPETFVPYYPYFSFVLPPALQG 66 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR 112 PE L + + + GA +V+G +D + N+ +I DA +A++ Sbjct: 67 PEHLKLYERAPTVPGPLTQAVAAAARRHGAVVVLGVNERDHGSLYNTQLIFDADGSLALK 126 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN-------ICKHL 163 + P Y HE+ + G V R+G L C W++ N + +H Sbjct: 127 RRKITPTY---HERMIWGQGDGAGLAVVETAVGRVGALAC---WEHYNPLARYALMARHE 180 Query: 164 KKQGAEFLFSL 174 + A+F SL Sbjct: 181 EIHAAQFPGSL 191 >gi|261821462|ref|YP_003259568.1| NAD synthetase [Pectobacterium wasabiae WPP163] gi|261605475|gb|ACX87961.1| NAD+ synthetase [Pectobacterium wasabiae WPP163] Length = 274 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 40/261 (15%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L++Y+ + F +++G+SGG DS L + A+ + +T Y++ + P ++ Sbjct: 30 LKNYLNAHPFVTSLVLGISGGQDSTLTGKLCQTAITELRNETGNSRYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 D A C A+ ++ P + + L S V N ++R R Sbjct: 90 DEADCQDAIAFIQPDRVLTVNIKPAIEASEATLHAIGVDL----SDFVKGNEKARERMKA 145 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 +++ + +++ T + +E G+ T YGD NP+ L K R + Sbjct: 146 QYSIAGMNAGLVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQGKALL 196 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-E 509 LG P + K+P+A+L + D+ SLP L ++I + ++ Q E Sbjct: 197 RELG-----CPAHLYTKAPTADL---EEDRPSLPDEVALGVTYEKI----DDYLEGKQIE 244 Query: 510 YNDETVRYVEHLLYGSEYKRR 530 ND +E+ +E+KRR Sbjct: 245 ANDAAT--IENWYRKTEHKRR 263 >gi|50121340|ref|YP_050507.1| NAD synthetase [Pectobacterium atrosepticum SCRI1043] gi|81644921|sp|Q6D4H8|NADE_ERWCT RecName: Full=NH(3)-dependent NAD(+) synthetase gi|49611866|emb|CAG75315.1| NH3-dependent NAD(+) synthetase [Pectobacterium atrosepticum SCRI1043] Length = 274 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 34/241 (14%) Query: 283 LRDYVQKNNF-HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L++Y+ + F +++G+SGG DS L + A+ + +T Y++ + P ++ Sbjct: 30 LKNYLNAHPFITSLVLGISGGQDSTLTGKLCQTAITELRNETGTSRYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMS-----QFLQEEPSGIVAENIQSRIRGNIL 391 D A C A+ + P L VN ++ S + + E S V N ++R R Sbjct: 90 DEADCQDAIAF---IQPDRVLTVNIKPAIESSEATLRAIGVELSDFVKGNEKARERMKAQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +++ + +++ T + +E G+ T YGD NP+ L K R + Sbjct: 147 YSIAGMNAGLVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQGKALLR 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESFIN 505 LG P + K+P+A+L RP D+ +L Y +DD + K I N+ + I Sbjct: 198 ELG-----CPSHLYTKAPTADLEEDRPSLPDEVALGVTYEKIDDYLEGKPIDANDAATIE 252 Query: 506 N 506 N Sbjct: 253 N 253 >gi|310766964|gb|ADP11914.1| Putative hydrolase [Erwinia sp. Ejp617] Length = 263 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD-IRLGILICEDIW 154 V N+++++ G IIA DK++L + E R +G P+V D I +G++ C DI Sbjct: 93 VFNALIVIRQGRIIARYDKLHLYDAFTLQESRNVTAGDRIPPLVDVDGINVGLMTCYDI- 151 Query: 155 KNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 + + + L GA+ L S + LK+ H Sbjct: 152 RFPELARRLALDGADLLVL--PSAWVRGPLKEMH 183 >gi|262282201|ref|ZP_06059970.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sp. 2_1_36FAA] gi|262262655|gb|EEY81352.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sp. 2_1_36FAA] Length = 274 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETRDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTRAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|238024882|ref|YP_002909114.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia glumae BGR1] gi|237879547|gb|ACR31879.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia glumae BGR1] Length = 279 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 27/226 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I +AQ+ G IA N+A+ A R G DLI+F E ++G+P + ++ Sbjct: 1 MQIELAQIPVADGKIAPNLARVTEV-IRARRDGTDLIVFPETTLTGFP------TRESVR 53 Query: 65 ACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + A+D ++ G G+ VGF +D N+ +++DA IA+R Sbjct: 54 DVAEALDGPSVAAVREAARAAGVGVAVGFAERDGGRFFNTTLLIDAHGEIALR------- 106 Query: 120 YSEFH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 Y + H + F G F+ + +G+LIC DI + + + GA+ L N Sbjct: 107 YRKTHLWASDVGVFEPGDRYAVCEFKGMTVGLLICYDI-EFPETARAIASLGADLLIVTN 165 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGAS 220 + + +R + + + + VN++G G D L F G S Sbjct: 166 GNMDPFGPVHRRAIVARAMENQMFAAL--VNRIGDGDDNLTFPGES 209 >gi|295835685|ref|ZP_06822618.1| hydrolase [Streptomyces sp. SPB74] gi|197698122|gb|EDY45055.1| hydrolase [Streptomyces sp. SPB74] Length = 281 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 8/179 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKS 61 ++ A+ Q GD IAK EA RQG +I F E+F + Y E ++ + Sbjct: 6 VRAALVQAT-WTGDSESMIAKHEEHAREAARQGARIIGFQEVFNAPYFCQVQEAEHYRWA 64 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRDKINLPN 119 + ++ + G IVV ++ EG N+ ++DA G+ + K ++P Sbjct: 65 EPVPDGPTVRRMRDLARETGMVIVVPVFEREAEGFYYNTAAVIDADGSYLGKYRKHHIPQ 124 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 F EK F G + P+ + R+G+ IC D + L GA+ +++ +A+ Sbjct: 125 LKGFWEKFYFRPGNAGWPVFDTAVGRVGVYICYDR-HFPEGWRQLGLNGAQIVYNPSAT 182 >gi|28849203|dbj|BAC65149.1| ammonia-dependent NAD synthetase [uncultured bacterium] Length = 275 Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust. Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 31/225 (13%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-------GKENVQTIM 325 EA+ V ++D + + +++G+SGG+DS +A A+ G + + I Sbjct: 25 EAEVARRVTFIQDCLLNSGLKTLVLGISGGVDSLTAGLLAQRAMQELRAAKGDDAYRFIA 84 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE----- 380 + Y + DA A + + D ++ SL ++ E V+ Sbjct: 85 VRLPYETQFDEHDAQASVDFI--EPDERHTVNIGPAVKSLANEVAAFEGKAAVSRDFVLG 142 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N ++R+R ++ + +++ T + +E +G+ T +GD + PL L K QV + Sbjct: 143 NTKARMRMVAQYTIAGAAGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAI 202 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 A + P S++EK P+A+L P + D+ S Sbjct: 203 ARHFGA--------------PESLVEKIPTADLEDLSPGKPDEAS 233 >gi|150021480|ref|YP_001306834.1| ExsB family protein [Thermosipho melanesiensis BI429] gi|149794001|gb|ABR31449.1| ExsB family protein [Thermosipho melanesiensis BI429] Length = 342 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY-KYTSPQSLEDAAA 341 +R+ V+ K+I+ SGG+DS + A + +ALG NV+ + + Y +T +S++ Sbjct: 14 IRETVKSLKKDKLIVAFSGGLDSTVTAILCREALGPRNVELVNVVYGPFTYKRSIQIVKD 73 Query: 342 CAKALGCKYDVL 353 AK LG K L Sbjct: 74 AAKRLGLKITFL 85 >gi|40890071|gb|AAR97380.1| nitrilase [uncultured organism] Length = 330 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 20/172 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------PE 54 ++ +K A QL+PV+ G + K R E +G++ F E + YP P Sbjct: 1 MRVVKAAAVQLSPVLHSRDGTVEKVVRKIHELAEEGVEFATFPETVVPYYPYFSFVQTPL 60 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHDGG-----AGIVV--GFPRQDQEGVLNSVVILDA-G 106 +F +++ A+ + T G AG+VV G +D + N+ ++ DA G Sbjct: 61 QQIFGTEYLRLLDQAVTVPSAATDAIGEAARWAGLVVSIGVNERDGGTLYNTQLLFDADG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 ++I R KI +Y + SG + + R+G L C W+++N Sbjct: 121 SLIQRRRKITPTHYERMIWGQGDGSGLR--AVDSKAGRIGQLAC---WEHNN 167 >gi|213970969|ref|ZP_03399091.1| hydrolase, carbon-nitrogen family [Pseudomonas syringae pv. tomato T1] gi|302060033|ref|ZP_07251574.1| hydrolase, carbon-nitrogen family protein [Pseudomonas syringae pv. tomato K40] gi|213924345|gb|EEB57918.1| hydrolase, carbon-nitrogen family [Pseudomonas syringae pv. tomato T1] Length = 249 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 20/209 (9%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI--Q 64 +A AQ + G + N+A + A G D +LF EL ++GY P DL + + Sbjct: 6 LAAAQFCSIRGQLKHNLAGHLAFMQRAADLGADYLLFPELSLTGYEP-DLAHELALSPND 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNYSE 122 AC I L VG P + G + ++ G++IA + P Sbjct: 65 ACLEPIRALAMHLQ---LMTTVGVPLKGPGGSIEVGALTFTAHGDVIAYAKQYLHPG--- 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP--YY 180 E F G + + R+G+ +C D ++ + + + S+ SP Y Sbjct: 119 --EDAVFSPGSEDCYLQLNQHRIGLCVCADFSHPEHVQRLSEGGSGVYAASVLISPGGYA 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 H+ E++ G LP++ N G Sbjct: 177 HDS-----ELLAGHARRHRLPVLIANHGG 200 >gi|254555279|ref|YP_003061696.1| hypothetical protein JDM1_0110 [Lactobacillus plantarum JDM1] gi|254044206|gb|ACT60999.1| conserved hypothetical protein [Lactobacillus plantarum JDM1] Length = 276 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 33/58 (56%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 + +V + SGGIDS L +A+D LG++NV ++ + + + + A + A+ LG Sbjct: 17 DLQRVTVAFSGGIDSTLVLKMALDVLGRDNVTAVVANSELFTDEEFDKAMSLAEELGA 74 >gi|294925863|ref|XP_002779022.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239887868|gb|EER10817.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 720 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 55/253 (21%), Positives = 91/253 (35%), Gaps = 35/253 (13%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L+ D GN + + A+ + EL +SGY ED + Q C Sbjct: 9 VATCNLDQWALDFDGNEKRVIESIRIAHNKNAKFRTGPELELSGYGCEDHFLETDTFQHC 68 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 ++ + + T D + +G P + N V L G I+ VR K+ L + + E Sbjct: 69 WESLAHIITATSDLDMLMDIGMPALFKSTGYNCRVFLYRGRILLVRPKMLLADDGNYRES 128 Query: 127 RTF-----------------------------ISGYSNDPIVFRDIRLGILICEDIWKNS 157 R F + + D +G CE++W Sbjct: 129 RWFAPWPMERGLEEMLVPDVVQEALPADVRQQTCPFGFGVVQLADCAVGCEACEELWAPE 188 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 N + G + + + + S + KLKKR +++ G S +Y N +G D Sbjct: 189 NPHTIMALDGVDIIANGSGSHHELRKLKKRLKLIAGATSKSGGVYLYANSMG------CD 242 Query: 218 GASFCFDGQQQLA 230 G FDG +A Sbjct: 243 GGRLYFDGSSLIA 255 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 12/113 (10%) Query: 377 IVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +NIQ+R R +L L H++ ++L+T N E GY T Y SG NP Sbjct: 497 LALQNIQARSRMVMSFMLAQLLPHARRRGGYLLVLSTGNVDEALRGYLTKYDCSSGDINP 556 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVI-PPSILEKSPSAELRPHQTDQ 480 + + K + W +++ G L E++ P E P+ E P Q D+ Sbjct: 557 IGSISKGDLKSFLVWASTN---LGYPALAEIVQAPPTAELRPTVEGEPAQLDE 606 >gi|269798608|ref|YP_003312508.1| exsB protein [Veillonella parvula DSM 2008] gi|269095237|gb|ACZ25228.1| exsB protein [Veillonella parvula DSM 2008] Length = 229 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG+DS C A+A++ GK+NV + + Y + LE A A + G + Sbjct: 5 QKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYGMEGKT 64 Query: 353 LPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + + L SL++Q ++ P G E + G + Sbjct: 65 MDVTKLFAFSNCSLLTQSSEDIPQGSYKEQQDAEGEGTV 103 >gi|323350317|ref|ZP_08085982.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis VMC66] gi|322123502|gb|EFX95173.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis VMC66] Length = 274 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDN 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTKAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|296116847|ref|ZP_06835453.1| nitrilase [Gluconacetobacter hansenii ATCC 23769] gi|295976648|gb|EFG83420.1| nitrilase [Gluconacetobacter hansenii ATCC 23769] Length = 324 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 23/174 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIA-GNIAKARRAREEANRQGMDLILFTELFISGYP------- 52 M + ++ A Q++PV+GD G K +A +A +G+ L +F E F+ YP Sbjct: 1 MSRIVRAAAIQISPVLGDDGLGTARKVCQAIRDAAEKGVALAVFPETFVPYYPYFSFIQP 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 E L + + + G +V+G +D + N+ VI DA G Sbjct: 61 AFRFGNEHLALYERAVVIPGPVTRMVAEAARQTGMVVVLGVNERDFGTLYNTQVIFDATG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 I+ R KI P Y HE+ + G V R+G L C W++ N Sbjct: 121 EILLKRRKIT-PTY---HERMVWGQGDGAGLKVVDSAAGRIGALAC---WEHYN 167 >gi|284163472|ref|YP_003401751.1| tRNA methyl transferase-like protein [Haloterrigena turkmenica DSM 5511] gi|284013127|gb|ADB59078.1| tRNA methyl transferase-like protein [Haloterrigena turkmenica DSM 5511] Length = 313 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAACAKALGCKYDVL 353 V++ SGG+DS++ AA+A DALG++ V T P++ LEDA A +G +++++ Sbjct: 21 VLVAFSGGVDSSVVAALAHDALGEDAVACTA--KSETLPEAELEDARRVADEIGIRHEIV 78 Query: 354 PIHDLVNHFF 363 +L + F Sbjct: 79 SFSELESDDF 88 >gi|167586220|ref|ZP_02378608.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia ubonensis Bu] Length = 275 Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 21/167 (12%) Query: 2 LKKLKIAIAQLNPV-VGDIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFK 59 L + +A L V D+A N+A+ARR EA +G L+L E F G+ D K Sbjct: 6 LSATPVRVAALQMVSTPDVARNLAEARRLIAEAAGEGAQLVLLPEYFCFMGHQDTD---K 62 Query: 60 KSFIQACSSA-IDTLKSDTHDGGAGIVVG--FPRQDQEG--VLNSVVILDAGNIIAVR-D 113 + +A I +D V+G P + E VLN+ ++ D A R D Sbjct: 63 LALAEAYRDGPIQQFLADAARRHGIWVIGGTLPLKAPEANRVLNTTLVFDPSGTEAARYD 122 Query: 114 KINLPNYSE----FHEKRTFISGYSNDPIVFRDI---RLGILICEDI 153 KI+L N+ + F E RT G D +V D R+G+ +C D+ Sbjct: 123 KIHLFNFEKGDESFDEARTIRPG---DTVVTFDAPFGRVGLSVCYDL 166 >gi|167044130|gb|ABZ08813.1| putative PP-loop family protein [uncultured marine crenarchaeote HF4000_APKG5C13] Length = 267 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + +++ LSGG+DSAL A A LGK + + YK + + LE A + +G K+ V Sbjct: 16 NSILVALSGGVDSALVAYSAYTKLGKSAI-AVTADYKTLAQEELEYAKKISSEIGIKHIV 74 Query: 353 LPIHDLVNHFF 363 + ++L N F Sbjct: 75 IEYNELDNESF 85 >gi|119774689|ref|YP_927429.1| NAD synthetase [Shewanella amazonensis SB2B] gi|189083406|sp|A1S5V3|NADE_SHEAM RecName: Full=NH(3)-dependent NAD(+) synthetase gi|119767189|gb|ABL99759.1| NH(3)-dependent NAD(+) synthetase [Shewanella amazonensis SB2B] Length = 276 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 48/225 (21%), Positives = 93/225 (41%), Gaps = 34/225 (15%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSPQSLEDAAAC--- 342 +++G+SGG+DS++ + A+ + N +T + LPY + E AC Sbjct: 40 LVLGISGGVDSSVAGRLCQLAVNELNQETDSQQYRFIAVRLPYLVQKDEH-EAQMACEFI 98 Query: 343 ------AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 +G D + L F + + + V N+++R+R ++ Sbjct: 99 QPSKLVTVNVGSGSDGIHTETLTG-FKAAGLELPEASKVDFVKGNVKARMRMIAQYEIAG 157 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++ T + +E G+ T +GD + PL L K QV Q+A + + Sbjct: 158 LTGGLVVGTDHSAENITGFYTKWGDGACDLAPLFGLNKRQVRQIARYLGA---------- 207 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 P ++ K+P+A+L H+ E + D I +E +E Sbjct: 208 ----PDVLVVKAPTADLECHRPGLEDEVALGLTYDQIDDFLEGKE 248 >gi|116493261|ref|YP_804996.1| NAD synthetase [Pediococcus pentosaceus ATCC 25745] gi|116103411|gb|ABJ68554.1| NH(3)-dependent NAD(+) synthetase [Pediococcus pentosaceus ATCC 25745] Length = 272 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 35/217 (16%) Query: 283 LRDYVQK-NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 +++Y++K + +++G+SGG DS L A+A A+ + +T + Y++ + P ++ Sbjct: 31 MKNYLKKVPSLRSLVLGISGGQDSTLAGALAEIAVRELREETGIQDYRFIAVRLPYGVQA 90 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 D + KA+ + D+ P D + + + G NI++R R Sbjct: 91 DESDAMKAIEFMQADEVVRIDIKPAADAMVAALEANDLKISDFNKG----NIKARERMIA 146 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 ++ + +++ T + +E G+ T +GD PL L K Q Sbjct: 147 QYGIAGSNAGIVIGTDHAAESVTGFYTKFGDGGADIIPLWRLDKRQ-------------- 192 Query: 451 SGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESL 483 G L E+ P + EK+P+A+L RP D+ +L Sbjct: 193 -GKAMLKELNAPVELYEKTPTADLEEERPALPDEVAL 228 >gi|152966675|ref|YP_001362459.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Kineococcus radiotolerans SRS30216] gi|151361192|gb|ABS04195.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Kineococcus radiotolerans SRS30216] Length = 266 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 13/153 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA Q GD+ N+A A A +G+ L++ +E+F++GY D V + + Sbjct: 1 MKIAGLQHPGTPGDVEENLAALEAAATRAAAEGVRLLVTSEMFLTGYNIGDRVAELAREP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSEF 123 D + G + VG P + GV NSV++LD G +A DK +L + Sbjct: 61 LEERVADVARRT----GVALAVGLPLPGKSGVTNSVLLLDETGRRLARYDKTHL--FGAL 114 Query: 124 HEKRTFISGYSNDPIVFRD---IRLGILICEDI 153 ++ F+ G P V D +RL L+C D+ Sbjct: 115 -DRSLFVPG--EHPTVTADLDGVRLAFLVCYDV 144 >gi|319892954|ref|YP_004149829.1| NAD synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317162650|gb|ADV06193.1| NAD synthetase [Staphylococcus pseudintermedius HKU10-03] gi|323463992|gb|ADX76145.1| NAD+ synthetase [Staphylococcus pseudintermedius ED99] Length = 278 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 44/221 (19%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQ----------TIMLPYKYT 331 + Y+ + F K +++G+SGG DS L + L EN++ + LPY Sbjct: 33 IEQYLHAHTFVKTLVLGISGGQDSTLAGKLV--QLAVENMRNASGRDVQFIAVKLPYGVQ 90 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAE-----NIQSR 385 +DA AL + P L + + Q +Q + +GI N ++R Sbjct: 91 -----KDADEVEDALNF---IQPDRILTVNIKPAVDQSVQSLKEAGIALSDFHKGNEKAR 142 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R + A++ ++ +++ T + +E G+ T +GD + PL L K Q QL + Sbjct: 143 ERMKVQYAIAANTSGIVVGTDHSAENITGFFTKHGDGAADIAPLFGLNKRQGRQLLQY-- 200 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 LG P + EK P+A+L +P D+E+L Sbjct: 201 -------LGA-----PAHLYEKVPTADLEDDKPQLPDEEAL 229 >gi|222823897|ref|YP_002575471.1| hydrolase, carbon-nitrogen family [Campylobacter lari RM2100] gi|222539119|gb|ACM64220.1| hydrolase, carbon-nitrogen family [Campylobacter lari RM2100] Length = 290 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 17/151 (11%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 SVV G+I K+++P+ F+EK F G +PI +LG+LIC D W Sbjct: 96 TSVVFEKDGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPIQTSVGKLGVLICWDQW-Y 154 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE--------IVTGQISHVHLPIIYVNQV 208 + + +GA+ L A ++ K+ + + G LP++ +N+V Sbjct: 155 PEAARLMALKGAQILIYPTAIGWFDKDEKEEKQRQLEAWIGVQRGHAIANGLPVVAINRV 214 Query: 209 G------GQDELI-FDGASFCFDGQQQLAFQ 232 G G +E I F G SF F Q + F+ Sbjct: 215 GFEKDESGVEEGIRFWGNSFVFGAQGEELFR 245 >gi|300716444|ref|YP_003741247.1| NH(3)-dependent NAD(+) synthetase [Erwinia billingiae Eb661] gi|299062280|emb|CAX59397.1| NH(3)-dependent NAD(+) synthetase [Erwinia billingiae Eb661] Length = 275 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 63/284 (22%), Positives = 115/284 (40%), Gaps = 56/284 (19%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P E + + V L+ Y++ F K +++G+SGG DS L ++ A+ + +T Sbjct: 15 PTIEVKQEIRTSVDFLKSYLKTYPFIKSLVLGISGGQDSTLTGKLSQTAIAELREETGDS 74 Query: 324 ------IMLPYKYTS-PQSLEDAAACAK-----ALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 + LPY + Q +DA K + K +L + +S F++ Sbjct: 75 AYQFIAVRLPYGVQADEQDCQDAIDFIKPDRVLTVNIKEAILASEKALRDAGVTLSDFIR 134 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 N ++R R +++ + +++ T + +E G+ T YGD NP+ Sbjct: 135 G--------NEKARERMKAQYSIAGMNAGVVVGTDHAAEAVTGFFTKYGDGGTDINPIFR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PY 486 L K Q QL L E+ P + K P+A+L RP D+ +L Y Sbjct: 187 LNKGQGKQL---------------LKELGCPEHLYLKQPTADLEDDRPGLQDEVALGVTY 231 Query: 487 PILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRR 530 ++D ++ + +D + +E +E+KRR Sbjct: 232 EMIDQYLE------------GKTIDDAAAKIIEGWYLKTEHKRR 263 >gi|78779000|ref|YP_397112.1| putative nitrilase [Prochlorococcus marinus str. MIT 9312] gi|78712499|gb|ABB49676.1| nitrilase-like protein [Prochlorococcus marinus str. MIT 9312] Length = 275 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 14/166 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N +A E A R+G +LI E F G E L C++ + T+ Sbjct: 16 NVEANFVEAEEQIELAARRGAELIGLPENFAFLGEDDEKLRLAPELSMKCTNFLKTMSQR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P D LN S + G ++A DKI +LP+ + + E T + Sbjct: 76 YQVFLLGGGYPVPAGDDRHTLNRSALFGRDGQVLAKYDKIHLFDVDLPDGNLYKESSTIL 135 Query: 131 SGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG P+V D+ ++G+ IC D+ + + ++L GAE + Sbjct: 136 SGEEYPPVV--DVPGLCKIGLSICYDV-RFPELYRYLSSNGAELIM 178 >gi|302871253|ref|YP_003839889.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor obsidiansis OB47] gi|302574112|gb|ADL41903.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor obsidiansis OB47] Length = 238 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 21/192 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+ + I N+ K E+A + +DLI F E+ ++GY + L+ + Sbjct: 1 MKVGVVQM-KISNSIENNLIKITNFLEQAKVEEVDLICFPEMALTGYNIQ-LLKSRVLND 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKINLPNYSE 122 SAID + ++G P + E + N SV+ D Y + Sbjct: 59 LILSAIDKISQLASKYSICCIIGHPFFEGEKLKNRASVIFPDG----------RYKKYDK 108 Query: 123 FH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 H E + F G ++ R GI IC D NI K K + +F L A Sbjct: 109 LHPTELEMKIFSEGKDTLVFEYKQKRFGIAICRD-QNFYNIFKEYKDNACDGVFVLAA-- 165 Query: 179 YYHNKLKKRHEI 190 +Y+N + R +I Sbjct: 166 HYYNPKEARWKI 177 >gi|38174857|emb|CAD89780.1| MelJ protein [Melittangium lichenicola] Length = 335 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 23/223 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A QL G + N+ AR + A QG L+L E + +GY V+K Sbjct: 1 MSSLRVAALQLRSENGRVQHNLEHARPFIQRAAEQGAQLLLLPEFYPTGYLQSADVWKAG 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNY 120 + LK G + F + + N+ V+ +G I VR K P+Y Sbjct: 61 ETLD-GPTVRFLKQQAAQWGVHLGTSFLEAEGDDFYNAFVLASPSGRIHKVR-KRRAPSY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLG---ILICED-IWKNSNICKHLKKQGAEFLFSLNA 176 + + G +DP V D LG + IC D + + C ++ + Sbjct: 119 EAY-----WFRGSGDDPCVI-DCELGRFSVGICADNHFGDMAACIEGQRAQLHLMPHCYC 172 Query: 177 SPYYHNKL-------KKRHEIVTGQI---SHVHLPIIYVNQVG 209 P+ + K R ++ T + SH +P++ NQ G Sbjct: 173 VPHENPKTFPSELIEASRRQMETLPVRYASHFGVPVVLANQCG 215 >gi|103486874|ref|YP_616435.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sphingopyxis alaskensis RB2256] gi|98976951|gb|ABF53102.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sphingopyxis alaskensis RB2256] Length = 338 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 19/173 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK- 59 +L K ++A Q PV D A + KA EA G L+ F E+F+ YP + + Sbjct: 8 LLPKSRVAAVQAAPVFLDPAATVDKACALIAEAAGNGAQLVAFPEVFVPAYPYWNWLMTP 67 Query: 60 -----------KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV---LNSVVILDA 105 ++ ++ + L + D G +V+G +D V NS +++ A Sbjct: 68 IEGAEWHERLYRASVRVDGPEVAALCAAARDHGCTLVIGINERDPVSVGTLYNSNLVIGA 127 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 + R + +P ++ EK T+ G + I D +G L +N+N Sbjct: 128 DGSLLGRHRKLVPTWA---EKLTWAGGDGSS-IRVHDTSVGPLGTLACGENTN 176 >gi|218890177|ref|YP_002439041.1| putative carbon-nitrogen hydrolase family protein [Pseudomonas aeruginosa LESB58] gi|218770400|emb|CAW26165.1| putative carbon-nitrogen hydrolase family protein [Pseudomonas aeruginosa LESB58] Length = 271 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 26/234 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV--FKKSF 62 +K+ + Q+ GD A N+ +A A + +L++F E ++G+P ED + + Sbjct: 1 MKVELVQIAGRDGDTAHNLERALAAIADCAAD-TELVVFPETHLTGFPSEDNIAALAEPL 59 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 SA+ + + + + +G D N+ +++ A + IA++ Y + Sbjct: 60 DGPTVSAVQRVARERN---VSVAIGIAEADAGRYYNTTLLI-APDGIALK-------YRK 108 Query: 123 FH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS- 177 H ++ F G ++ IR+G+L+C DI + + L + GAE + N + Sbjct: 109 THLWASDRGIFTPGNRYATALWNGIRVGLLVCFDI-EFPESARALGQLGAELIIVTNGNM 167 Query: 178 -PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFDGQQQL 229 PY R I+ + + ++ VN+VG G L+F G S D QL Sbjct: 168 DPY---GPTHRTAIMARAMENQAYAVM-VNRVGHGDGGLVFAGGSAVVDPYGQL 217 >gi|312144502|ref|YP_003995948.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Halanaerobium sp. 'sapolanicus'] gi|311905153|gb|ADQ15594.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Halanaerobium sp. 'sapolanicus'] Length = 267 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 11/179 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L+ A V+ DI NI R+ + + +D+ILF E+ ++GY E + K Sbjct: 1 MEDLRAAAVNFESVLFDIEKNIKNIRKWTAKLQDK-VDIILFPEMAVTGYTNEPKI-KDY 58 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL-PNY 120 + SSA+ L + I+VG ++ S +I+ II K +L PN Sbjct: 59 ALNINSSAVKELLLIAEEYQQIIIVGLAEKEAANYYISQLIISPDGIIGKYRKSHLSPN- 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDI-WKNSNICKHLKKQGAEFLFSLNASP 178 E + F +G + ++ ++ + IC D + + + +K GAE +F A+P Sbjct: 118 ----ESKIFSAGQKIEVFTVKNTKIAVQICYDSHFPELSTIQAVK--GAEVIFVAFATP 170 >gi|170724582|ref|YP_001758608.1| Nitrilase [Shewanella woodyi ATCC 51908] gi|169809929|gb|ACA84513.1| Nitrilase [Shewanella woodyi ATCC 51908] Length = 334 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP------- 53 M K+A+ Q +PV D+ + K E+A ++ LI F E +I GYP Sbjct: 1 MTNIYKVAVVQASPVFMDLDATVEKTIELIEKAAKENAKLIAFPECWIPGYPWWIWLNAP 60 Query: 54 -EDLVFKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGN 107 +L + +++ + C S + + +K + +G +D + ++ + + G Sbjct: 61 INNLKYIQTYHENCLVLDSESFNKIKESAKINNIFVSLGASEKDHGSLYISQFLFSNQGE 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILIC 150 +I R K+ P + E+ F G +D VF RLG L C Sbjct: 121 LIQARRKLK-PTHV---ERTLFGEGDGSDLDVFETELGRLGQLSC 161 >gi|15921376|ref|NP_377045.1| beta-ureidopropionase [Sulfolobus tokodaii str. 7] gi|15622162|dbj|BAB66154.1| 281aa long hypothetical beta-ureidopropionase [Sulfolobus tokodaii str. 7] Length = 281 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 6/157 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--EDLVF 58 M +KIA+ Q+ V A NI KA + A + G +LI++ ELF + Y P ED F Sbjct: 1 MKHMVKIAMIQMGSVESKEA-NIQKALEYTKAAVKDGAELIVYNELFTTQYFPATEDPKF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVL-NSVVILDAGNIIAVRDKI 115 + + G+++ +D++ G+ ++ + + G ++ K Sbjct: 60 FDLAEPEDGPTVRVFAEFSKQYKIGMIITIFEEDKKIKGIYYDTAIFIKDGKVLGKYRKT 119 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 ++P ++EK F G F ++G +IC D Sbjct: 120 HIPQVPGYYEKFYFKPGKEYPVFDFGGYKIGAVICYD 156 >gi|57242332|ref|ZP_00370271.1| beta-alanine synthetase homolog [Campylobacter upsaliensis RM3195] gi|57017012|gb|EAL53794.1| beta-alanine synthetase homolog [Campylobacter upsaliensis RM3195] Length = 290 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 17/157 (10%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 ++V G+I K+++P+ F+EK F G +PI RLG+LIC D W Sbjct: 96 TAIVFEKDGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSVGRLGVLICWDQW-Y 154 Query: 157 SNICKHLKKQGAEFLFSLNASPYYH---NKLKKR--HEIVTGQISHV---HLPIIYVNQV 208 + + +GAE L A ++ N+ K+R H + Q +H L ++ +N+V Sbjct: 155 PEAARIMALKGAEILIYPTAIGWFDKDTNEEKERQLHAWLGIQKAHAIANGLYVVAINRV 214 Query: 209 GG-------QDELIFDGASFCFDGQQQLAFQMKHFSE 238 G QD + F G SF + Q + F+ SE Sbjct: 215 GFEKDKSGVQDGIRFWGNSFVYGPQGEEIFKADSQSE 251 >gi|304440745|ref|ZP_07400628.1| carbon-nitrogen hydrolase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370778|gb|EFM24401.1| carbon-nitrogen hydrolase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 273 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 26/185 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VF 58 M + + I I Q ++GD+ N++KA +A +G ++++ ELF +GY E L Sbjct: 1 MTRNVNIGIIQFESILGDVEANVSKAVDLIRDAANKGANIVVLPELFATGYNLEILQERI 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPR-QDQEGVL--NSVVILDAGNIIA----- 110 + I+ + D + + ++ F ++ G++ +S+V D GN + Sbjct: 61 AELSIKYFNYTYDRMAEAAKENKVYLIASFGEIREVPGIVYNSSIVFDDEGNKMGSFAKS 120 Query: 111 ---VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 RD++ + E E F S Y + GI IC D+ + + L +G Sbjct: 121 HLWFRDRL---YFKEGDEYPVFDSKYG---------KFGIAICYDMGFPESF-RSLMLKG 167 Query: 168 AEFLF 172 AE +F Sbjct: 168 AEMIF 172 >gi|28377060|ref|NP_783952.1| hypothetical protein lp_0109 [Lactobacillus plantarum WCFS1] gi|300766797|ref|ZP_07076710.1| PP-loop superfamily ATP-binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|28269891|emb|CAD62790.1| unknown [Lactobacillus plantarum WCFS1] gi|300495335|gb|EFK30490.1| PP-loop superfamily ATP-binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 276 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 33/58 (56%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 + +V + SGGIDS L +A+D LG++NV ++ + + + + A + A+ LG Sbjct: 17 DLQRVTVAFSGGIDSTLVLKMALDVLGRDNVTAVVANSELFTDEEFDKAMSLAEELGA 74 >gi|262306015|gb|ACY45600.1| gln amidotransferase [Armadillidium vulgare] Length = 197 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ + + T ++ E + C+ +R+ V N KV++ +SGG+DS +CAA+ Sbjct: 12 NFLYEIAGLTGTFTMKSREEN---CIKYIRETVSSN---KVLMLVSGGVDSTVCAALLRK 65 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 AL ++ V + + + + ++ + LG K V+ H Sbjct: 66 ALTEDQVIAVHIDNGFLRKKEVQQVEESLQKLGLKLKVVSAH 107 >gi|71904060|ref|YP_280863.1| NAD synthetase [Streptococcus pyogenes MGAS6180] gi|71803155|gb|AAX72508.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pyogenes MGAS6180] Length = 288 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 44 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETSDQAYQFIAVRLPYGVQA 103 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL + P L +N ++ Q + +G+ NI++R R Sbjct: 104 DEADAQKALAF---IAPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 160 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 161 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 211 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 212 VLGA-----DAALYEKVPTADLEDQKPGLADEVALGVTYQDIDDYLE 253 >gi|146319327|ref|YP_001199039.1| NAD synthetase [Streptococcus suis 05ZYH33] gi|146321531|ref|YP_001201242.1| NAD synthetase [Streptococcus suis 98HAH33] gi|223934020|ref|ZP_03625974.1| NAD+ synthetase [Streptococcus suis 89/1591] gi|253752358|ref|YP_003025499.1| NH(3)-dependent NAD(+) synthetase [Streptococcus suis SC84] gi|253754184|ref|YP_003027325.1| NH(3)-dependent NAD(+) synthetase [Streptococcus suis P1/7] gi|253756118|ref|YP_003029258.1| NH(3)-dependent NAD(+) synthetase [Streptococcus suis BM407] gi|302024307|ref|ZP_07249518.1| NAD synthetase [Streptococcus suis 05HAS68] gi|330833295|ref|YP_004402120.1| NAD synthetase [Streptococcus suis ST3] gi|189030734|sp|A4W3A3|NADE_STRS2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030736|sp|A4VX00|NADE_STRSY RecName: Full=NH(3)-dependent NAD(+) synthetase gi|145690133|gb|ABP90639.1| NAD synthase [Streptococcus suis 05ZYH33] gi|145692337|gb|ABP92842.1| NAD synthase [Streptococcus suis 98HAH33] gi|223897309|gb|EEF63716.1| NAD+ synthetase [Streptococcus suis 89/1591] gi|251816647|emb|CAZ52288.1| NH(3)-dependent NAD(+) synthetase [Streptococcus suis SC84] gi|251818582|emb|CAZ56416.1| NH(3)-dependent NAD(+) synthetase [Streptococcus suis BM407] gi|251820430|emb|CAR47097.1| NH(3)-dependent NAD(+) synthetase [Streptococcus suis P1/7] gi|292558960|gb|ADE31961.1| NAD+ synthase [Streptococcus suis GZ1] gi|319758762|gb|ADV70704.1| NAD synthetase [Streptococcus suis JS14] gi|329307518|gb|AEB81934.1| NAD synthetase [Streptococcus suis ST3] Length = 274 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 24/174 (13%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+DY++K+ F K ++G+SGG DS L +A + + +T I LPY + Sbjct: 30 LKDYLKKHPFLKTYVLGISGGQDSTLAGRLAQLTMEEMRAETGDDSYQFIAIRLPYGVQA 89 Query: 333 PQSLEDAAAC------AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 +S AA + + K + VN MS F + N ++R+ Sbjct: 90 DESDAQAALAFIQPDVSLTINIKESTDAMVAAVNANGLAMSDFNKG--------NAKARM 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 R A++ K ++ T + +E G+ T +GD PL L K Q QL Sbjct: 142 RMIAQYAIAGERKGAVIGTDHAAENITGFFTKHGDGGADILPLFRLNKRQGKQL 195 >gi|317133259|ref|YP_004092573.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ethanoligenens harbinense YUAN-3] gi|315471238|gb|ADU27842.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ethanoligenens harbinense YUAN-3] Length = 301 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 38/256 (14%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ-- 64 +++ +P GD N+ + E A ++G D+++ E+ ++GY E +K +Q Sbjct: 7 VSVVTFHPAWGDKKANLKRIMEYIECAAKKGSDIVVLPEMALTGYDDEGDKPRKEKMQVR 66 Query: 65 ----ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ---EGVLNSVVILDAGNIIAVRDKINL 117 + + + T G V+G P +D E V N + + + KI+L Sbjct: 67 LAEAVPGPSTEKVAELTKRLGIYAVMGMPIRDDNDPETVYNGLAVFSPDGLAGSYHKIHL 126 Query: 118 ----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 PN++ R +I + P+ GI IC D + + ++ +G + + Sbjct: 127 PPPEPNWAT-RGDRPYILETAWGPV-------GIAICYDNYSFPELMRYYVSKGCRLIVN 178 Query: 174 LNA-----SPYYHNKLKKRHEIVTGQISHVHLPIIYV--NQVGGQD-ELIFDGASFCFDG 225 A PYY + + G IY+ +GG D E F G S Sbjct: 179 STALAHCHGPYYGPATLEAAIVQNG---------IYIASANLGGLDVENYFWGGSSILGP 229 Query: 226 QQQLAFQMKHFSEQNF 241 Q+ + +++ + F Sbjct: 230 GQKHTWSYYYYAGRKF 245 >gi|170700115|ref|ZP_02891136.1| NAD+ synthetase [Burkholderia ambifaria IOP40-10] gi|170134983|gb|EDT03290.1| NAD+ synthetase [Burkholderia ambifaria IOP40-10] Length = 282 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 26/225 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ + ++G+SGG+DS+ A +AV+ L + + + P ++ D Sbjct: 36 LAQYLRSSGLRTYVLGISGGVDSSTAGRLAQLAVEQLRAGGYDSRFIAMRL--PNGVQND 93 Query: 339 AAACAKALGC-------KYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 94 EADAQRALAFVRADETFTVDVKPAADAMLASLVASGHAFETPAQQDFVHGNIKARERMIA 153 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + +++ T + +E +G+ T +GD PL L K +V +A + Sbjct: 154 QYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADVLPLAGLSKRRVRAVARALGGDEL- 212 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 + +P + LE ELRP + D+ + Y +DD ++ Sbjct: 213 -----IVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDDFLE 247 >gi|325523798|gb|EGD02040.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. TJI49] Length = 273 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 59/255 (23%), Positives = 98/255 (38%), Gaps = 27/255 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KLK+ I QL GD N+ + A A G D+++F E ++G+ S + Sbjct: 2 KLKLDIVQLAGRDGDTRYNLQRTLDA-IAACAPGTDIVMFPEAQLTGF------LDPSNL 54 Query: 64 QACSSAID-----TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 C+ +D + + + +VVG D N+ V + I K +L Sbjct: 55 AECAEPLDGPSVTAVAAAARERDVAVVVGLIENDGGRFYNTTVFVTPDGIALRYRKTHL- 113 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL--NA 176 E + G + +R +R+G+LIC D + + L + GA + N Sbjct: 114 ---WVTEHGVVLPGDRYATVEWRGVRIGLLICYD-SEFPESGRALAELGAHLILVTDGNM 169 Query: 177 SPY-YHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFDGQQQLAFQMK 234 PY Y ++ + Q+ V N+VG +++F G S D L F+ Sbjct: 170 EPYRYVHRTSVSARAMENQVFAV-----VANRVGESTHDVVFAGGSLAVDPFGNLLFETG 224 Query: 235 HFSEQNFMTEWHYDQ 249 E E +DQ Sbjct: 225 AV-ESRHAVELDFDQ 238 >gi|251789567|ref|YP_003004288.1| NAD synthetase [Dickeya zeae Ech1591] gi|247538188|gb|ACT06809.1| NAD+ synthetase [Dickeya zeae Ech1591] Length = 274 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 38/260 (14%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L++Y++ + F K +++G+SGG DS L + A+ + +T Y++ + P ++ Sbjct: 30 LKNYLKAHPFIKSLVLGISGGQDSTLTGKLCQTAITELRQETGKAGYRFIAVRLPYGVQA 89 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 D C A+ ++ P D + E S V N ++R R Sbjct: 90 DEQDCQDAIQFIQPDQVLTVNIKPAVDASEATLRAIGI----ELSDFVKGNEKARERMKA 145 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 +++ + +++ T + +E G+ T YGD NP+ L K R + Sbjct: 146 QYSIAGMNAGLVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNK---------RQGKALL 196 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEY 510 + LG P + K+P+A+L + D+ SLP L ++I + E ++ Sbjct: 197 NLLG-----CPSHLYTKAPTADL---EDDRPSLPDETALGITYEKIDDYLEG-----KQL 243 Query: 511 NDETVRYVEHLLYGSEYKRR 530 V +E +E+KRR Sbjct: 244 EPIDVAIIESWYRKTEHKRR 263 >gi|94988983|ref|YP_597084.1| NAD synthetase [Streptococcus pyogenes MGAS9429] gi|94992876|ref|YP_600975.1| NAD synthetase [Streptococcus pyogenes MGAS2096] gi|94542491|gb|ABF32540.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pyogenes MGAS9429] gi|94546384|gb|ABF36431.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pyogenes MGAS2096] Length = 288 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 44 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETSDKAYQFIAVRLPYGVQA 103 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL + P L +N ++ Q + +G+ NI++R R Sbjct: 104 DEADAQKALAF---IAPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 160 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 161 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 211 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 212 VLGA-----DAALYEKVPTADLEDQKPGLADEVALGVTYQDIDDYLE 253 >gi|56750710|ref|YP_171411.1| aliphatic nitrilase [Synechococcus elongatus PCC 6301] gi|81299649|ref|YP_399857.1| Nitrilase [Synechococcus elongatus PCC 7942] gi|56685669|dbj|BAD78891.1| aliphatic nitrilase [Synechococcus elongatus PCC 6301] gi|81168530|gb|ABB56870.1| Nitrilase [Synechococcus elongatus PCC 7942] Length = 334 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 24/187 (12%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PE 54 M K+ +A AQ+ PV+ + G++A+ A EA G+ LI+F E F+ YP P Sbjct: 1 MADKIIVAAAQIRPVLFSLEGSVARVLAAMAEAAAAGVQLIVFPETFLPYYPYFSFVEPP 60 Query: 55 DLVFK---KSFIQACSSA---IDTLKSDTHDGGAGIVVGFPRQDQEGVLNS-VVILDAGN 107 L+ + K + QA + + + +++G +D + N+ ++I D G+ Sbjct: 61 VLMGRSHLKLYEQAFTMTGPELQQIARAARQHRLFVLLGVNERDGGSLYNTQLLISDQGD 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKH--L 163 ++ R KI P Y HE+ + G V + ++G L C W++ N L Sbjct: 121 LLLKRRKIT-PTY---HERMVWGQGGGAGLTVVETVLGKVGALAC---WEHYNPLARFSL 173 Query: 164 KKQGAEF 170 QG E Sbjct: 174 MTQGEEI 180 >gi|328706136|ref|XP_001948752.2| PREDICTED: omega-amidase NIT2-like [Acyrthosiphon pisum] Length = 303 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 15/192 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++A+ QL V D + N+A A + ++A G L + E F + Y L + S + Sbjct: 28 FRVALLQLT-VTADKSTNVANAIKRVQQAKLNGCTLAILPECFNAPYNTA-LFREYSEVI 85 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDK-----INL 117 + L IV G P + V N+ + D GN+IA K IN+ Sbjct: 86 PGGDTCEALSQAAKSNEMYIVGGSIPEICDDKVYNTCTVWDPNGNLIAKHRKVHLFDINI 145 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----F 172 P F E +G + + ++G+ IC DI + + + +KQG + L F Sbjct: 146 PGGVCFKESDALAAGNTLNTFQLGKFKIGLGICYDI-RFAEMAAIYRKQGCDMLIYPSAF 204 Query: 173 SLNASPYYHNKL 184 ++ P + + L Sbjct: 205 NMTTGPLHWSLL 216 >gi|116334419|ref|YP_795946.1| PP family ATPase [Lactobacillus brevis ATCC 367] gi|116099766|gb|ABJ64915.1| ATP-utilizing enzyme of the PP-loop superfamily [Lactobacillus brevis ATCC 367] Length = 278 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 +++V++G SGGIDS + A+D LG++NV ++ + E A AK +G + Sbjct: 18 YNRVVVGFSGGIDSTVVLKEALDVLGRDNVLAVVANSELFLDAEYEMAGQLAKGMGAQVT 77 Query: 352 VLPIHDLVN 360 + + L N Sbjct: 78 GIQLDYLAN 86 >gi|33151752|ref|NP_873105.1| hypothetical protein HD0558 [Haemophilus ducreyi 35000HP] gi|81423753|sp|Q7VNH6|QUEC_HAEDU RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|33147973|gb|AAP95494.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 224 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 30/61 (49%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 HK I+ SGG DS C A+ +ENV+ I Y LE AA A+ LG K V Sbjct: 8 HKAIVIFSGGQDSTTCLFQAIQEFKRENVEVITFQYGQRHSIELEKAAWIAQNLGIKQTV 67 Query: 353 L 353 + Sbjct: 68 I 68 >gi|315504943|ref|YP_004083830.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Micromonospora sp. L5] gi|315411562|gb|ADU09679.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Micromonospora sp. L5] Length = 255 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 5/149 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L++ Q ++GDI + +A+ Q + L+LF E F+ GY E+ ++ + Sbjct: 14 RLRVGACQTPEILGDIERALRCIEEFAAQADVQAVHLLLFPECFLQGYLVEEQHVREHAL 73 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S + +V G ++ N+ V++ G ++ K +L Sbjct: 74 SLDSERFAAVLRRLARIEQTLVFGVIEHAEDRYYNTAVVVARGELVGAYRKTHLVPGEAL 133 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICED 152 +K G + V R +R GI IC D Sbjct: 134 FDK-----GDAYPTFVLRGVRFGINICYD 157 >gi|163735978|ref|ZP_02143405.1| hydrolase, putative [Roseobacter litoralis Och 149] gi|161390795|gb|EDQ15137.1| hydrolase, putative [Roseobacter litoralis Och 149] Length = 261 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 15/225 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 +K+A+ Q +P IA + R A A QG D+++ E+F+ GY PE + + Sbjct: 1 MKLALWQTHPR-SSIASALTALREAATSAAAQGADVLITPEMFVGGYNIGPERIA---TH 56 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYS 121 + +D+LKS +VVG N+ V++D G +A K +L + Sbjct: 57 ADHAAQVLDSLKSTAKTQDIALVVGLTLPAHPLPHNACVVIDNTGTEVARYHKTHL--FG 114 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + ++ F +G + + ++ + IC D+ + + + L +GAE + + A+ Sbjct: 115 DV-DRAQFSAGAALSEVFDLAGWKVALAICYDV-EFPELIRSLALRGAEVILTPTANMEP 172 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + + R +V + + + Y N +G + + ++G S C G Sbjct: 173 FDTINTR--LVPARAEENGVYVAYCNYIGAEAQFTYNGLS-CLSG 214 >gi|40890219|gb|AAR97454.1| nitrilase [uncultured organism] Length = 336 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 27/49 (55%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K K+A+ Q PV D+ + K + EEA +G LI F E FI GYP Sbjct: 7 KYKVAVVQAAPVWLDLEATVDKCIQLIEEAASKGCKLIAFPETFIPGYP 55 >gi|330807255|ref|YP_004351717.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375363|gb|AEA66713.1| NH(3)-dependent NAD(+) synthetase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 275 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 27/213 (12%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE-- 337 ++D + + +++G+SGG+DS +A A+ + +T YK+ + P + Sbjct: 35 IQDCLVNSGLKSLVLGISGGVDSLTAGLLAQRAMRELREKTGNAAYKFIAVRLPYETQFD 94 Query: 338 --DAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSG--IVAENIQSRIRGNILM 392 +A AC + + + I V ++ F + V N ++R+R Sbjct: 95 EHEAQACVDFIDPDERHTVNIGPAVKALADQVAAFEGKAAVSRDFVLGNTKARMRMVAQY 154 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++ +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 155 TIAGTEHGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARDFGA------ 208 Query: 453 LGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 --------PESLVEKIPTADLEDLSPGKPDEAS 233 >gi|253580745|ref|ZP_04858009.1| nitrilase [Ruminococcus sp. 5_1_39B_FAA] gi|251848116|gb|EES76082.1| nitrilase [Ruminococcus sp. 5_1_39BFAA] Length = 306 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 29/47 (61%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIA+ Q PV+ + ++ KA + EA Q DLI+F ELFI GYP Sbjct: 9 KIALVQAEPVMFSKSASLKKALQYICEAASQKPDLIVFPELFIPGYP 55 >gi|238023439|ref|YP_002907672.1| Putative nitrilase [Burkholderia glumae BGR1] gi|237880492|gb|ACR32821.1| Putative nitrilase [Burkholderia glumae BGR1] Length = 338 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 20/163 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------PED-- 55 +K+A A + PV D A +AKA EA G +LI+F E FI +P P D Sbjct: 1 MKVAAAHVAPVFLDRAATVAKAVNLIREARSAGAELIVFPESFIPAFPVWASLWAPIDNH 60 Query: 56 ---LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV---LNSVVILDAGNII 109 F + I A I ++++ G + +GF + + V NS +++D + Sbjct: 61 QLFERFVAASIYADGPEIAEIRAEAERSGIFVSLGFSERSRASVGCLWNSNLLIDDRGAV 120 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIV--FRDIRLGILIC 150 + +P F EK + G + V R R+G LIC Sbjct: 121 LNHHRKLVPT---FFEKLVWAPGDGHGLRVADTRIGRVGGLIC 160 >gi|307150920|ref|YP_003886304.1| Queuosine synthesis-like protein [Cyanothece sp. PCC 7822] gi|306981148|gb|ADN13029.1| Queuosine synthesis-like protein [Cyanothece sp. PCC 7822] Length = 272 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 289 KNNFH---KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 KN F + +I SGG+DS L A IA D LG + + P+ LEDA A + Sbjct: 10 KNIFKEMDRALIAYSGGVDSTLVAKIAYDVLGDRALAVTAVSPSLL-PEELEDAKIQAAS 68 Query: 346 LGCKYDVLPIHDLVNHFFS 364 +G ++++ H++ N ++ Sbjct: 69 IGIAHELIQTHEMENPNYT 87 >gi|169823890|ref|YP_001691501.1| hypothetical protein FMG_0193 [Finegoldia magna ATCC 29328] gi|167830695|dbj|BAG07611.1| conserved hypothetical protein [Finegoldia magna ATCC 29328] Length = 244 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 27/237 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARR-AREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 +KI++ + + D N+ + + AR+EA G D+ +F E F+ G+ V+K Sbjct: 1 MKISLCAVEQRLNDKVFNMKQIEKYARQEA-ENGADMCVFGESFLQGFECLSFVYKDDVG 59 Query: 63 --IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS-VVILDAGNIIAVRDKINLPN 119 + S+ I ++S + I G+ D +S + + G II +++ P Sbjct: 60 VPVTQNSNEIAEIRSIARENEVAISFGYIENDHGAFYSSQMTVTKRGEIINNYRRMS-PG 118 Query: 120 YSEFHEKRTFISG-----YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 + E + G Y D + F LIC D W + N+ ++ ++ L Sbjct: 119 WKEPSACSDYREGSKLYLYKMDGVSF-----STLICGDFW-DENLYTYISMIDSDILLWP 172 Query: 173 ---SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + +Y N+ E Q V +P+++VN +D+ GA + G+ Sbjct: 173 VFVDFSVIDWYKNEF----EDYKKQSQLVPMPVLFVNSFVDEDDRAKGGAYVFYQGK 225 >gi|124025382|ref|YP_001014498.1| putative nitrilase [Prochlorococcus marinus str. NATL1A] gi|123960450|gb|ABM75233.1| Possible nitrilase [Prochlorococcus marinus str. NATL1A] Length = 274 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 24/171 (14%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 DI N+ A E A ++G DL+ E F G + L S + C+S + T+ Sbjct: 16 DIDANLNSAEEQIELAAKRGADLVGLPENFAFLGEDQKKLKIASSIYEKCNSFLVTMARR 75 Query: 77 THD---GGAGIVVGFPRQDQEGV--LNSVVILDA-GNIIAVRDKI-----NLPNYSEFHE 125 GG GFP +GV LN + G +A DKI +LP + + E Sbjct: 76 YQVVLLGG-----GFPVPAGDGVRTLNRAELFGKDGQSLARYDKIHLFDVDLPEGNTYRE 130 Query: 126 KRTFISGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 T +SG + P+V D+ ++G+ IC D+ + + + L +GA+ L Sbjct: 131 SETIVSGSESPPVV--DVPGLCKIGLSICYDV-RFPELYRDLVNKGADLLM 178 >gi|325695207|gb|EGD37108.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK150] Length = 274 Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 42/247 (17%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDN 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + P L VN S + E +G Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-----IQPDVSLTVNIKESADAMTRAVEATG 126 Query: 377 IVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 NI++R R AL+ ++ T + +E + T +GD PL Sbjct: 127 ATVSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K Q QL + LG P++ EK P+A+L +P D+ +L Y Sbjct: 187 LNKRQGKQL---------LATLGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYN 232 Query: 488 ILDDIIK 494 +DD ++ Sbjct: 233 EIDDYLE 239 >gi|328945047|gb|EGG39203.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK1087] Length = 274 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRNSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTRAVETTGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|123965915|ref|YP_001010996.1| putative nitrilase [Prochlorococcus marinus str. MIT 9515] gi|123200281|gb|ABM71889.1| Possible nitrilase [Prochlorococcus marinus str. MIT 9515] Length = 275 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 14/166 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N A+A E A+R+G +LI E F G E L C++ + T+ Sbjct: 16 NVETNFAEAEEQIELASRRGAELIGLPENFAFLGEDNEKLRLASELAIKCTNFLKTMSQR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P D N S + G ++A DKI +LP+ + + E T + Sbjct: 76 YQVFLLGGGYPVPAGDNNHTFNRSALFGKDGQVLAKYDKIHLFDVDLPDGNLYKESSTIL 135 Query: 131 SGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG + P+V D+ ++G+ IC D+ + + ++L GAE + Sbjct: 136 SGKEHPPVV--DVPGLCKIGLSICYDV-RFPELYRNLSLNGAELIM 178 >gi|255723950|ref|XP_002546904.1| hypothetical protein CTRG_01209 [Candida tropicalis MYA-3404] gi|240134795|gb|EER34349.1| hypothetical protein CTRG_01209 [Candida tropicalis MYA-3404] Length = 321 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K+K+A+ QLNP +G I NI+ + + +DLI+ EL I+GY D K ++ Sbjct: 2 KIKVALLQLNPRIGQINTNISHVKSLLNKITSP-VDLIVLPELAITGYNFTDPSHIKPYL 60 Query: 64 QACSS---AIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILD-AGNII 109 ++ + +++ K + +G+P QE + NS + + +G +I Sbjct: 61 ESTKNYGPSLNLAKEISEKYQCLTFIGYPEIAQENTIYNSCAVFNGSGKLI 111 >gi|40062752|gb|AAR37646.1| carbon-nitrogen hydrolase family protein [uncultured marine bacterium 439] Length = 255 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 17/227 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA LN DI N+ + + +A G D+++ E+F +G+ + V K + + Sbjct: 1 MKIATISLNIAWQDIEKNLERTEKFVRQAKADGCDVVVLPEVFNTGFIAD--VGKYAELP 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSE 122 C + L+ + IV G +Q E N ++ D+ GN +A K++ NY+ Sbjct: 59 NCKTH-HALQQFALNNLINIVAGASEKQPNEKAHNIALVFDSHGNEVAKYSKLHPFNYA- 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 +E + F SG + + IC D+ + I + + ++ E +F + P H Sbjct: 117 -NEGKYFTSGNETIKFELDGVACSVFICYDL-RFPEIFRQIAEE-VEVIFVIANWP--HT 171 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + ++ + I+ VN++G DG ++G + Sbjct: 172 REMHWQNLLIARAIENQCFIVGVNRIGN------DGVGLKYNGSSMV 212 >gi|326332842|ref|ZP_08199100.1| hydrolase [Nocardioidaceae bacterium Broad-1] gi|325949400|gb|EGD41482.1| hydrolase [Nocardioidaceae bacterium Broad-1] Length = 282 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 8/186 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 ++ AI+Q GD + K +A QG +I F ELF Y +D + + Sbjct: 4 VRAAISQTT-WTGDKVSMLDKHEGFARDAAAQGAQVICFQELFYGPYFGITQDKKYYRYA 62 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRDKINLPNY 120 A + S + G +V+ + G+ N+ V++DA G I+ K +LP+ Sbjct: 63 EPADGPIVQRFASLAKELGMVMVLPIYEEADTGIYYNTAVLVDADGTILGKYRKNHLPHV 122 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS-P 178 +F EK F G P+ + ++G+ IC D + L GA +F+ NA+ P Sbjct: 123 EKFWEKFYFRPGNLGYPVFESAVGKVGMYICYDR-HFPEGWRELGLNGAHMVFNPNATKP 181 Query: 179 YYHNKL 184 N+L Sbjct: 182 GLSNRL 187 >gi|331266052|ref|YP_004325682.1| NAD+ synthetase [Streptococcus oralis Uo5] gi|326682724|emb|CBZ00341.1| NAD+ synthetase [Streptococcus oralis Uo5] Length = 274 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 46/262 (17%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLP-IHDLVNHFFSLMSQFLQEEPSG 376 + LPY + D A KAL + P + +VN S + E +G Sbjct: 75 SYQFIAVRLPYGVQA-----DEADAQKALAF---IQPDVSLVVNIKESADAMAAAVEATG 126 Query: 377 IVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 NI++R R AL+ ++ T + +E G+ T +GD PL Sbjct: 127 SPVSDFNKGNIKARSRMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PY 486 L K Q QL L E+ P++ EK P+A+L +P D+ +L Y Sbjct: 187 LNKRQGKQL---------------LKELGADPALYEKIPTADLEEEKPGIADEVALGVTY 231 Query: 487 PILDDII--KRIVENEESFINN 506 +DD + K I ++ I N Sbjct: 232 AEIDDYLEGKTISPEAQATIEN 253 >gi|330960069|gb|EGH60329.1| NAD synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 275 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 +++ +Q +++G+SGG+DS +A A+ + T + LPY + Sbjct: 35 IKECLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRASTGDDSYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPASAVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ + +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYQGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|308490725|ref|XP_003107554.1| CRE-NIT-1 protein [Caenorhabditis remanei] gi|308250423|gb|EFO94375.1| CRE-NIT-1 protein [Caenorhabditis remanei] Length = 321 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 27/47 (57%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIAI Q V+ D + K ++ EA+ G +L+LF E FI GYP Sbjct: 3 KIAIVQAGTVLYDKVATLEKVKKYVVEASENGAELVLFPEAFIGGYP 49 >gi|118619757|ref|YP_908089.1| amidohydrolase [Mycobacterium ulcerans Agy99] gi|118571867|gb|ABL06618.1| predicted amidohydrolase [Mycobacterium ulcerans Agy99] Length = 219 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 12/149 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L +A+AQ V+G +A N+ + AN + L++F EL ++GY + + + Sbjct: 7 ELVVAVAQPRTVMGAVAANVDAHAALIQRANAR---LVVFPELSLTGYQ-----LEVAPV 58 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +D L G +VG P +D+ ++V++D+ V K +L + Sbjct: 59 DVAGPVVDRLVLACAATGCSALVGAPVEDRGRRYIAMVLVDSSGAEVVYRKTHL----DA 114 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICED 152 EK F G I R+G+ IC D Sbjct: 115 AEKARFRPGPGPRTIDLDGWRIGLGICRD 143 >gi|78065304|ref|YP_368073.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. 383] gi|77966049|gb|ABB07429.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia sp. 383] Length = 275 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 22/151 (14%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 D+A N+A+ARR EA +G L+L E F G+ D + Q I +D Sbjct: 23 DVARNLAEARRLIAEAAGEGAQLVLLPEYFCFMGHRDTDKLALAEPYQ--DGPIQHFLAD 80 Query: 77 THDGGAGIVVG------FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE----FHE 125 V+G P D+ VLN+ ++ D +GN A DKI+L N+ + F E Sbjct: 81 AARRHGIWVIGGTLPLKAPEPDR--VLNTTLVFDPSGNEAARYDKIHLFNFEKGDESFDE 138 Query: 126 KRTFISGYSNDPIVFRDI---RLGILICEDI 153 RT +G D +V D R+G+ +C D+ Sbjct: 139 ARTIRAG---DTVVAFDAPFGRVGLSVCYDL 166 >gi|46126919|ref|XP_388013.1| hypothetical protein FG07837.1 [Gibberella zeae PH-1] Length = 294 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 66/175 (37%), Gaps = 31/175 (17%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KIAI Q P + N AKA A +G D+ L E ++ + PE Sbjct: 1 MAPVYKIAIIQFEPKTIALEENFAKAESHLRSAAEKGCDIALLPEFHLTSWEPE----HP 56 Query: 61 SFIQACSSAIDTL---KSDTHDGGAGIVVG-------FPRQDQEGVLNSVVILDAGN--I 108 F+ A + D L + + IV G P E + N L AG I Sbjct: 57 EFVSASKKSADYLSKYQDLARELSINIVPGTICEVHIVPNSKDEELRNMAYFLAAGTGEI 116 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD----------IRLGILICEDI 153 + K NL +H +R ++ ++ P D +R G+LIC D+ Sbjct: 117 CSAYQKKNL-----WHPERPHLTSSTHTPHTAFDTPLKHANGKPVRAGMLICWDL 166 >gi|268317066|ref|YP_003290785.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Rhodothermus marinus DSM 4252] gi|262334600|gb|ACY48397.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Rhodothermus marinus DSM 4252] Length = 299 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 17/186 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF 58 M + LK+ + Q+ D A N+ +A EA RQG ++ ELF + Y ED + Sbjct: 1 MPETLKVGLVQMR-CSDDPAQNLERAVAGIREAARQGARIVCLPELFRTPYFCKHEDPRY 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA--GNIIAVRDKI 115 + + L + I+ + +G+ N++ +LD G + R K+ Sbjct: 60 FQLAEPVPGPTTEELARLAAELNVSILASLFEKRTDGLYHNTLAVLDPERGYLGKYR-KM 118 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR-----DIRLGILICEDIWKNSNICKHLKKQGAEF 170 ++P+ F EK F G + FR +R+G LIC D W + QGA+ Sbjct: 119 HIPHDPLFEEKYYFAPG----DLGFRVFDTAGVRIGTLICWDQW-FPEAARLTALQGAQI 173 Query: 171 LFSLNA 176 LF A Sbjct: 174 LFYPTA 179 >gi|312112580|ref|YP_003990896.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y4.1MC1] gi|311217681|gb|ADP76285.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y4.1MC1] Length = 455 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 8/155 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L+ +K+A Q +GD+ GN + EEA G LI+F E+ SGY E+ Sbjct: 4 LESVKVAAVQFESRLGDLEGNRHRMLELAEEAAENGAKLIVFPEMATSGYIFENRQEIAP 63 Query: 62 FIQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLP 118 +++ L ++ +V+G P D E NS V++ +I K +L Sbjct: 64 YVEPIPGPTTELFQTVAKKYSCYLVIGLPEVDSFTEIFYNSAVLIGPEGVIGRYRKTHLF 123 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI-RLGILICED 152 + R G P+ I + +LIC D Sbjct: 124 A----ADPRWAREGNEGIPVFSTKIGNIAMLICMD 154 >gi|288573966|ref|ZP_06392323.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569707|gb|EFC91264.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 307 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 29/47 (61%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +IA+ Q PV+ D + KA ++A +G +LI+F ELFI GYP Sbjct: 9 RIAVVQAAPVMFDSEASTEKAVDLTKKAAEKGAELIVFPELFIPGYP 55 >gi|29828495|ref|NP_823129.1| hydrolase [Streptomyces avermitilis MA-4680] gi|29605598|dbj|BAC69664.1| putative hydrolase [Streptomyces avermitilis MA-4680] Length = 280 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 12/185 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y PE Sbjct: 1 MAHVVRAALVQAT-WTGDTESMIAKHVEHAREAARQGAKVIGFQEVFNAPYFCQVQEPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRD 113 + + + + ++ + G IVV +Q G N+ ++DA G + Sbjct: 60 YRWAEPVPDGPT--VVRMQELARETGMVIVVPVFEVEQSGFYFNTAAVIDADGTYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G P+ + ++G+ IC D + L GA+ ++ Sbjct: 118 KHHIPQVKGFWEKYYFKPGNMGWPVFDTAVGKVGVYICYDR-HFPEGWRQLGLNGAQLVY 176 Query: 173 SLNAS 177 + +A+ Sbjct: 177 NPSAT 181 >gi|327472720|gb|EGF18147.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK408] Length = 274 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 36/244 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLKKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + LPY Q+ ED A KAL + + + M++ ++ + + Sbjct: 75 SYCFIAVRLPYGI---QADEDDAQ--KALAFIQPDVSLTVNIKESADAMTRAVEATGTKV 129 Query: 378 V---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 NI++R R AL+ ++ T + +E + T +GD PL L K Sbjct: 130 SDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLNK 189 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 Q QL + LG P++ EK P+A+L +P D+ +L Y +D Sbjct: 190 RQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEID 235 Query: 491 DIIK 494 D ++ Sbjct: 236 DYLE 239 >gi|324994088|gb|EGC26002.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK678] Length = 274 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRNSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTKAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|254392907|ref|ZP_05008075.1| hydrolase [Streptomyces clavuligerus ATCC 27064] gi|294811523|ref|ZP_06770166.1| Putative hydrolase [Streptomyces clavuligerus ATCC 27064] gi|326440090|ref|ZP_08214824.1| putative hydrolase [Streptomyces clavuligerus ATCC 27064] gi|197706562|gb|EDY52374.1| hydrolase [Streptomyces clavuligerus ATCC 27064] gi|294324122|gb|EFG05765.1| Putative hydrolase [Streptomyces clavuligerus ATCC 27064] Length = 265 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 17/225 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +IA+ Q + G + N+ A E A G L++ E+F++GY D V + + Sbjct: 1 MSSTRIALLQSSGRPGSVEDNLRTLDEAAERAAASGARLLVTPEMFLTGYAIGDRVPELA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A + + I G+P +D E + NS + D L NY Sbjct: 61 -ENADGPSAAAVAGIAARHSLAICHGYPERDGERIFNSARLTGP-------DGAPLANYR 112 Query: 122 EFH-----EKRTFISGYSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 + H E+R F G D +R+G+LIC D+ N+ H G + L Sbjct: 113 KTHLFGCFEQRWFTPGERQVVQAELDGLRIGMLICYDVEFPENVRAH-ALAGTDLLLVPT 171 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 A H +V + L I YVN+VG + E F G S Sbjct: 172 AQ--MHPFQFVAESLVPVRAFESQLYIAYVNRVGAEGEFEFVGLS 214 >gi|254253178|ref|ZP_04946496.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia dolosa AUO158] gi|124895787|gb|EAY69667.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia dolosa AUO158] Length = 275 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 22/151 (14%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 D+A N+A ARR EA +G L+L E F G+ D + Q I +D Sbjct: 23 DVARNLADARRLIAEAAGEGAQLVLLPEYFCFMGHRDTDKLALAEPYQ--DGPIQRFLAD 80 Query: 77 THDGGAGIVVG------FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE----FHE 125 V+G P D+ VLN+ ++ D +GN A DKI+L N+ + F E Sbjct: 81 AARRHGVWVIGGTLPLKAPEPDR--VLNTTLVFDPSGNEAARYDKIHLFNFEKGDESFDE 138 Query: 126 KRTFISGYSNDPIVFRDI---RLGILICEDI 153 RT +G D +V D R+G+ +C D+ Sbjct: 139 ARTIRAG---DTVVAFDAPFGRVGLSVCYDL 166 >gi|327459295|gb|EGF05641.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK1] gi|327490512|gb|EGF22293.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK1058] Length = 274 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRNSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTRAVETTGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|284048307|ref|YP_003398646.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Acidaminococcus fermentans DSM 20731] gi|283952528|gb|ADB47331.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Acidaminococcus fermentans DSM 20731] Length = 307 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 28/50 (56%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K L++A+ QL PV+ D A + + EA G + I+F EL I GYP Sbjct: 6 KDLRLALVQLEPVLFDKAACLGNTLKKLAEAAENGAEFIVFPELSIPGYP 55 >gi|156365939|ref|XP_001626899.1| predicted protein [Nematostella vectensis] gi|156213792|gb|EDO34799.1| predicted protein [Nematostella vectensis] Length = 701 Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LR+ HKV++ +SGG+DS +CAA+ ALG + V + + + Q Sbjct: 235 LREIRHTVGNHKVLVLVSGGVDSTVCAALLHKALGPDRVVAVHIDNGFMRKQESMQVEES 294 Query: 343 AKALGCKYDVL 353 K LG + VL Sbjct: 295 LKCLGLRLKVL 305 >gi|320164025|gb|EFW40924.1| nitrilase [Capsaspora owczarzaki ATCC 30864] Length = 272 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 19/203 (9%) Query: 5 LKIAIAQLNPVVG-DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 KIA+ Q+ + G D N+ A E A G L++ E F S Y + I Sbjct: 11 FKIALVQM--LCGADKQANLDNAASHIETAADNGAKLVILPECFNSPYGTKFFPEYAEPI 68 Query: 64 QACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL---- 117 S++ L + G ++ G P +DQ+ + N+ + D G +IA K++L Sbjct: 69 PGPSTS--ALAAVAKKRGIYLIGGSIPERDQDKLYNTSTVFDTRGELIAKHRKVHLFDID 126 Query: 118 -PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL----- 171 P F E T +G + + ++G+ IC DI + + KQG +FL Sbjct: 127 VPGKIRFQESETLTAGNALTVVETEFCKIGLAICYDI-RFPELALLSVKQGCKFLVYPGA 185 Query: 172 FSLNASPYYHNKLKKRHEIVTGQ 194 F++ P H +L R V Q Sbjct: 186 FNMTTGP-MHWELLARARAVDNQ 207 >gi|167566137|ref|ZP_02359053.1| NAD synthetase [Burkholderia oklahomensis EO147] gi|167575062|ref|ZP_02367936.1| NAD synthetase [Burkholderia oklahomensis C6786] Length = 284 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 38/231 (16%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQS 335 L DY++ ++G+SGGIDS+ A +AV+ L + + LPY Sbjct: 36 LADYLRAAGLRTYVLGISGGIDSSTAGRLAQLAVERLRASDYDARFVAMRLPYGVQ---- 91 Query: 336 LEDAAACAKALG-------CKYDVLPIHDLVNHFFSLMS-QFLQEEPSGIVAENIQSRIR 387 D A +AL D P D + + ++ V NI++R R Sbjct: 92 -HDEADAQRALAFVRADETLAVDAKPAADAMLAALATGGLAYVDHAHRDFVLGNIKARER 150 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ + +++ T + +E +G+ T +GD PL L K +V ++A Sbjct: 151 MIAQYAVAGARRGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVREVAR----- 205 Query: 448 GITSGLGPLTEVIPPSILEKSPSAE---LRPHQTDQESLP-PYPILDDIIK 494 T G L ++ K+P+A+ LRP + D+ + Y +DD ++ Sbjct: 206 --TLGADEL-------LVMKTPTADLETLRPQRPDEHAYGVTYEQIDDFLE 247 >gi|22536480|ref|NP_687331.1| NAD synthetase [Streptococcus agalactiae 2603V/R] gi|25010360|ref|NP_734755.1| NAD synthetase [Streptococcus agalactiae NEM316] gi|76787651|ref|YP_329020.1| NAD synthetase [Streptococcus agalactiae A909] gi|76798678|ref|ZP_00780901.1| NAD+ synthetase [Streptococcus agalactiae 18RS21] gi|77405003|ref|ZP_00782104.1| NAD+ synthetase [Streptococcus agalactiae H36B] gi|77410579|ref|ZP_00786939.1| NAD+ synthetase [Streptococcus agalactiae CJB111] gi|46396434|sp|Q8E1Q7|NADE_STRA5 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|46396437|sp|Q8E771|NADE_STRA3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|123602440|sp|Q3K383|NADE_STRA1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|22533311|gb|AAM99203.1|AE014205_4 NAD synthetase [Streptococcus agalactiae 2603V/R] gi|23094712|emb|CAD45931.1| unknown [Streptococcus agalactiae NEM316] gi|76562708|gb|ABA45292.1| NH(3)-dependent NAD(+) synthetase [Streptococcus agalactiae A909] gi|76585959|gb|EAO62494.1| NAD+ synthetase [Streptococcus agalactiae 18RS21] gi|77163294|gb|EAO74245.1| NAD+ synthetase [Streptococcus agalactiae CJB111] gi|77176442|gb|EAO79210.1| NAD+ synthetase [Streptococcus agalactiae H36B] gi|319744235|gb|EFV96600.1| NAD+ synthetase [Streptococcus agalactiae ATCC 13813] Length = 273 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 37/258 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALC---AAIAVDAL---GKENVQTIMLPYKYTSPQS 335 L+DY+ K++F K ++G+SGG DS L A +AV+ L EN Q I + Y Sbjct: 30 LKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQAD 89 Query: 336 LEDAAACAKALG-CKYDV---LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 EDA KAL K D+ + I + V+ ++ E + NI++R R Sbjct: 90 EEDAQ---KALDFIKPDIALTINIKEAVDGQVRALNA-AGVEITDFNKGNIKARQRMISQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K+Q QL + Sbjct: 146 YAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQL---------LA 196 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 LG ++ EK P+A+L +E+ P I D+I + E + + Sbjct: 197 ELGA-----DKALYEKIPTADL------EENKP--GIADEIALGVTYQEIDAYLEGKVVS 243 Query: 512 DETVRYVEHLLYGSEYKR 529 D++ +E+ Y ++KR Sbjct: 244 DKSRGIIENWWYKGQHKR 261 >gi|268590199|ref|ZP_06124420.1| delta-aminovaleramide aminohydrolase [Providencia rettgeri DSM 1131] gi|291314480|gb|EFE54933.1| delta-aminovaleramide aminohydrolase [Providencia rettgeri DSM 1131] Length = 277 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 15/224 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK-KSF 62 K+K+A+AQ + +G+ N+ + + ++A G LI F EL +GY + L K Sbjct: 5 KVKVALAQFDSELGNKTNNLQRMAQLCQQAADSGAKLICFPELATTGYRGDLLTTKLWDL 64 Query: 63 IQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQ--EGVLNSVVILDAG--NIIAVRDKINL 117 + S TL S+ IV GF + + + NSV + + G I V K++ Sbjct: 65 SDSIGSETYTLFSELATRLNITIVSGFVERGEYLGDIYNSVGVWNPGCEGISGVFRKVHA 124 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 EK+ F G S P+ I ++GI+IC D+ + + L QGAE L + +A Sbjct: 125 FGI----EKQWFGRGDSF-PVFETPIGKIGIMICYDM-GFPEVARILTLQGAELLLAPSA 178 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + + + HL + VN+ G +++L G S Sbjct: 179 WCVQDRDVWDINSACRALENGTHL--LAVNRWGHEEDLHLFGGS 220 >gi|126695979|ref|YP_001090865.1| putative nitrilase [Prochlorococcus marinus str. MIT 9301] gi|126543022|gb|ABO17264.1| Possible nitrilase [Prochlorococcus marinus str. MIT 9301] Length = 275 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 14/166 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N +A E A R+G +LI E F G E L + C++ + T+ Sbjct: 16 NVEANFIEAEEQIELAARRGAELIGLPENFAFLGGDDEKLRLASELSEKCANLLKTMSQR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P D N S + G ++A DKI +LP+ + + E T + Sbjct: 76 YQVFLLGGGYPVPAGDDSHTFNRSALFGKDGQVLAKYDKIHLFDVDLPDGNLYKESSTIL 135 Query: 131 SGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG P+V DI ++G+ IC D+ + + ++L GAE + Sbjct: 136 SGKEYPPVV--DIPGLCKIGLSICYDV-RFPELYRYLSSNGAELIM 178 >gi|312960114|ref|ZP_07774626.1| hydrolase, carbon-nitrogen family [Pseudomonas fluorescens WH6] gi|311285608|gb|EFQ64177.1| hydrolase, carbon-nitrogen family [Pseudomonas fluorescens WH6] Length = 249 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 8/153 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L +A AQ + GD+ NI + A G+ L++F EL ++GY P + + Sbjct: 1 MTALTLAAAQSISIAGDVPANIQRHLAFMRVAAEHGVQLLVFPELSLTGYEPS--LAAEL 58 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNIIAVRDKINLPN 119 I + + L+ + VVG P + VL ++L A +A+ K +L + Sbjct: 59 AIAPEDALLAPLREMARELRLTAVVGMPIRLAPDSAVLIGALVLGAHGALALYTKQHLHD 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 E F++G + + + R+ + +C D Sbjct: 119 GEEL----AFVAGQGGAALEWGNDRIALAVCAD 147 >gi|156934317|ref|YP_001438233.1| NAD synthetase [Cronobacter sakazakii ATCC BAA-894] gi|189030448|sp|A7MNW9|NADE_ENTS8 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|156532571|gb|ABU77397.1| hypothetical protein ESA_02148 [Cronobacter sakazakii ATCC BAA-894] Length = 275 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 116/259 (44%), Gaps = 36/259 (13%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++ F K +++G+SGG DS L ++ A+ + +T Y++ + P ++ Sbjct: 30 LKSYLKTYPFLKTLVLGISGGQDSTLAGKLSQLAISELRDETGDQSYQFIAVRLPFGVQF 89 Query: 338 DAAACAKALGC--KYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRGNILM 392 D C AL VL ++ + + L+E E S V N ++R R Sbjct: 90 DEKDCQDALAFIQPDKVLTVN--IKEAVLASEKALREAGIELSDFVRGNEKARERMKAQY 147 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 +++ +K +++ T + +E G+ T YGD NPL L K R + Sbjct: 148 SIAGMTKGVVVGTDHAAEAVTGFFTKYGDGGTDINPLFRLNK---------RQGKLLLKT 198 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINNDQEYN 511 LG P + K P+A+L + D+ SLP D++ + +N + ++ Q + Sbjct: 199 LG-----CPEHLYLKVPTADL---EDDRPSLP-----DEVALGVTYDNIDDYLEGKQ-ID 244 Query: 512 DETVRYVEHLLYGSEYKRR 530 ++ + ++ +E+KRR Sbjct: 245 EKISQIIDGWYVKTEHKRR 263 >gi|77414488|ref|ZP_00790637.1| NAD+ synthetase [Streptococcus agalactiae 515] gi|77159467|gb|EAO70629.1| NAD+ synthetase [Streptococcus agalactiae 515] Length = 273 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 37/258 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALC---AAIAVDAL---GKENVQTIMLPYKYTSPQS 335 L+DY+ K++F K ++G+SGG DS L A +AV+ L EN Q I + Y Sbjct: 30 LKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQAD 89 Query: 336 LEDAAACAKALG-CKYDV---LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 EDA KAL K D+ + I + V+ ++ E + NI++R R Sbjct: 90 EEDAQ---KALDFIKPDIALTINIKEAVDGQVRALNA-AGVEITDFNKGNIKARQRMISQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K+Q QL + Sbjct: 146 YAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQL---------LA 196 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 LG ++ EK P+A+L +E+ P I D+I + E + + Sbjct: 197 ELGA-----DKALYEKIPTADL------EENKP--GIADEIALGVTYQEIDAYLEGKVVS 243 Query: 512 DETVRYVEHLLYGSEYKR 529 D++ +E+ Y ++KR Sbjct: 244 DKSRDIIENWWYKGQHKR 261 >gi|257079799|ref|ZP_05574160.1| NAD+ synthase [Enterococcus faecalis JH1] gi|256987829|gb|EEU75131.1| NAD+ synthase [Enterococcus faecalis JH1] Length = 275 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 36/242 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS------PQS 335 L+ Y+ K+ F K ++G+SGG DS L +A A+ + +T + Y++ + Q+ Sbjct: 31 LKAYLTKHPFLKTFVLGISGGQDSTLAGRLAQLAMTEMREETGDMSYQFIAIRLPYGEQA 90 Query: 336 LEDAAACAKA-----LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 E A A A + + D+ P D + SL + +Q S N+++R R Sbjct: 91 DEADAQSALAFIQPDVSLRVDIKPAVDAM--VGSLENAGVQ--ISDFNKGNMKARQRMIT 146 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + ++ T + +E + T YGD PL L K R + Sbjct: 147 QYAVAGENAGAVIGTDHAAENVTAFFTKYGDGGADILPLFRLNK---------RQGKALL 197 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVENEESFI 504 LG P ++ K P+A+L +P D+ +L Y +DD + K++ E ++ I Sbjct: 198 KELGA-----PEALYLKIPTADLEDDKPLVADEVALGVTYDAIDDYLEGKKVSETDQQTI 252 Query: 505 NN 506 N Sbjct: 253 EN 254 >gi|83643084|ref|YP_431519.1| amidohydrolase [Hahella chejuensis KCTC 2396] gi|83631127|gb|ABC27094.1| predicted amidohydrolase [Hahella chejuensis KCTC 2396] Length = 265 Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust. Identities = 53/267 (19%), Positives = 95/267 (35%), Gaps = 32/267 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+A P+ + + R EA +DLI F E ++ G D + + Sbjct: 1 MKIALAS-PPIPKSVDNALQWVDRLVTEATLSKVDLICFPEAYVPGIRGMDFKVENCSPR 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 SA+D + I++ EG N ++D ++ + N+ E Sbjct: 60 KMQSALDRICDLARKTSINIILPMEWPAPEGRRNVAFVVDRRGVLLGK---QTKNHLEQG 116 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+ FI G ++ GI+I + W+ + +GA+ +F Sbjct: 117 EEAYFIPGARRQLFDADGVKFGIVISHEGWRCPETVRWAASRGAKIVF------------ 164 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 H TG H + + Q G + ++ A C + + F +++ Sbjct: 165 ---HPHFTGS----HFKGVKLTQWGKLENPFYERAMQCRAIENTVFFASVNYA------- 210 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQE 271 D Q S ++ D A Y P E Sbjct: 211 --MDYQGSATTLIAPDGACVAYQPYAE 235 >gi|70952544|ref|XP_745433.1| NAD synthase [Plasmodium chabaudi chabaudi] gi|56525754|emb|CAH76785.1| NAD synthase, putative [Plasmodium chabaudi chabaudi] Length = 813 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 103/273 (37%), Gaps = 71/273 (26%) Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV------------------ 313 EE +N C + L + + + LSGGIDSA CA + Sbjct: 438 EELSFN-CSMFLWHILHLSKAKGFALALSGGIDSAFCACMVYVLSTMLEIQMKEVDDDTK 496 Query: 314 -DALGKEN----------------------VQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 D + KE + T+ +P K SP++ +KA+ + Sbjct: 497 HDDINKEMFSNKLKNLLINKACKKSICNQLLNTLSMPSKNNSPETKYFCEELSKAINSYH 556 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPS----------GIVAENIQSRIRG------NILMAL 394 +V I D+ + F + FL E+ + +NIQSR R N L+ Sbjct: 557 NVYCIDDIYSFFKNAGENFLNEKLKFKSENGTSYHDLCLQNIQSRSRMVMLYFFNTLICQ 616 Query: 395 SNHSK-------AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 +++ + L T N E +GY T Y SG + + ++ K + + + ++ Sbjct: 617 KKYAQYNMYNEFLITLATGNLDESILGYFTKYDCSSGDIDIIGNVSKILIKETMCYI-AN 675 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 T L L + I SPSAEL+P + Q Sbjct: 676 SPTFDLQILNK-----INSYSPSAELKPLENKQ 703 >gi|17229493|ref|NP_486041.1| hypothetical protein alr2001 [Nostoc sp. PCC 7120] gi|17131091|dbj|BAB73700.1| alr2001 [Nostoc sp. PCC 7120] Length = 271 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 10/166 (6%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLK 74 V D+ N+A+A + A R+G +L+ E F G + L ++ + I T+ Sbjct: 14 VPDLHKNLAQAEELIDLAVRRGAELVGLPENFSFMGEEQDKLAQAEAIARESEIFIKTMA 73 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDK-----INLPNYSEFHEKRT 128 G P D V N+ +++ +G +A +K +N+P+ + + E T Sbjct: 74 QRYQVTLLGGSFPVPVSDTGRVYNTTILISPSGEELARYNKVHLFDVNVPDGNTYRESST 133 Query: 129 FISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLF 172 ++G P+ F + +G+ IC D+ + + +HL +G + +F Sbjct: 134 VVAGQQLPPVHFSEYLGNIGVSICYDV-RFPELYRHLSDKGTDIIF 178 >gi|300855317|ref|YP_003780301.1| putative hydrolase [Clostridium ljungdahlii DSM 13528] gi|300435432|gb|ADK15199.1| predicted hydrolase [Clostridium ljungdahlii DSM 13528] Length = 277 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 15/179 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + Q+ + NI KA+ +A +G D+++ E+F P D+ + + + Sbjct: 2 VKIGLCQMKVLSCSKKSNIEKAKSMIVQATDKGADIVVLPEMFNC---PYDIKNFREYAE 58 Query: 65 ACSSAIDTLK--SDTHDGGAGIVVG--FPRQDQEG-VLNSVVILDA-GNIIAVRDK---- 114 A DTLK S +++G P DQ+G V N+ + + GN+I K Sbjct: 59 AEYCYGDTLKMLSSVSREKKILLIGGSIPELDQKGNVYNTSFVFNKDGNLIGKHRKMHLF 118 Query: 115 -INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 I++ N F E + G I + ++GI IC DI + + + + GA+ +F Sbjct: 119 DIDIKNKITFKESKVLTPGNKITIIDTKWGKIGIAICYDI-RFPELIRLMALNGAKIVF 176 >gi|254431220|ref|ZP_05044923.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Cyanobium sp. PCC 7001] gi|197625673|gb|EDY38232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Cyanobium sp. PCC 7001] Length = 399 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAAACAKALGCKY 350 H+V +GLSGG+DS+L AA+ V+A + T+ L + L DAA + LG + Sbjct: 32 HRVAVGLSGGVDSSLTAALLVEAGWEVEGLTLWLMSGKGACCAEGLVDAAGICEQLGVPH 91 Query: 351 DVLPIHDLVNHFFSLMSQFL 370 V+ D +HF + + FL Sbjct: 92 HVV---DFRDHFRAQIVDFL 108 >gi|254423738|ref|ZP_05037456.1| conserved hypothetical protein TIGR00268 [Synechococcus sp. PCC 7335] gi|196191227|gb|EDX86191.1| conserved hypothetical protein TIGR00268 [Synechococcus sp. PCC 7335] Length = 269 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + +I SGGIDS L A +A D LG + + + P+ EDA A LG + V+ Sbjct: 17 RALIAYSGGIDSTLVAKVAWDVLGDQAL-AVTANSPSLMPEDFEDAKTQAAQLGIAHRVV 75 Query: 354 PIHDLVNHFFS 364 H++ N ++ Sbjct: 76 ETHEMDNEQYT 86 >gi|289581720|ref|YP_003480186.1| asparagine synthase [Natrialba magadii ATCC 43099] gi|289531273|gb|ADD05624.1| asparagine synthase [Natrialba magadii ATCC 43099] Length = 317 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAACAKALGCKYDVL 353 V++ SGG+DS++ AA+A DALG + V T P++ LEDA A +G +++++ Sbjct: 59 VLVAFSGGVDSSVVAALAHDALGDDAVACTA--KSETLPEAELEDATRVADEIGIRHEIV 116 Query: 354 PIHDLVNHFF 363 +L + F Sbjct: 117 SFSELESDQF 126 >gi|292669088|ref|ZP_06602514.1| nitrilase [Selenomonas noxia ATCC 43541] gi|292649251|gb|EFF67223.1| nitrilase [Selenomonas noxia ATCC 43541] Length = 308 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 32/50 (64%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 + ++A+ Q PV+ D A ++ KA E++ QG +L++F ELF+ GYP Sbjct: 6 ENCRLALVQAAPVMFDKAASLKKALLWIEKSAAQGAELVVFPELFLPGYP 55 >gi|73661485|ref|YP_300266.1| PP family ATPase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494000|dbj|BAE17321.1| ATP-utilizing enzyme of the PP-loop superfamily [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 274 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 34/59 (57%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + + VI+ SGG+DS+L A+D LG ++V+ +++ + T + + A A A L + Sbjct: 18 DMNSVIVAFSGGVDSSLVLKKAIDVLGHDHVKAVIVKSELTRNEEFDQAIALAHQLNAQ 76 >gi|81428404|ref|YP_395404.1| hypothetical protein LSA0790 [Lactobacillus sakei subsp. sakei 23K] gi|61396667|gb|AAX46037.1| Lsa790 [Lactobacillus sakei] gi|78610046|emb|CAI55094.1| Hypothetical protein, ATP utilizing enzyme PP-loop family [Lactobacillus sakei subsp. sakei 23K] Length = 278 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 34/65 (52%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KVI+ SGGIDS L +A++ LGKENV ++ + + + A A +G + Sbjct: 20 KVIVAFSGGIDSTLVLKMALETLGKENVLAVVANSELFTDEEFNKAIDLAHEMGANVEAT 79 Query: 354 PIHDL 358 ++ L Sbjct: 80 TLNYL 84 >gi|312128232|ref|YP_003993106.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor hydrothermalis 108] gi|311778251|gb|ADQ07737.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor hydrothermalis 108] Length = 231 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 10/211 (4%) Query: 19 IAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTH 78 I N+ K E+A + +DL+ F E+ ++GY + L+ A+D + Sbjct: 7 IENNLLKIANFLEQAKVEEVDLVCFPEMALTGYNIQ-LLKSIDLNDVILPALDKISQLAS 65 Query: 79 DGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPI 138 ++G P ++ E + N ++ DK++ EK+ F G Sbjct: 66 KYSVCCIIGHPYREGEELKNRASVIFPDGRCEKYDKLHPTEL----EKKIFSEGKGTLVF 121 Query: 139 VFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN----KLKKRHEIVTGQ 194 ++ R GI IC D NI K K +G + +F L A Y K+ K I + Sbjct: 122 EYKHKRFGIAICRD-QNFYNIFKEYKDRGCDGVFILAAHYYSPKEARWKIDKNRSIPITR 180 Query: 195 ISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + N G +I G S DG Sbjct: 181 AVENGYYVFLANATGAHLNMISLGHSLIVDG 211 >gi|294891266|ref|XP_002773503.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239878656|gb|EER05319.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 720 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 55/253 (21%), Positives = 91/253 (35%), Gaps = 35/253 (13%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L+ D GN + + A+ + EL +SGY ED + Q C Sbjct: 9 VATCNLDQWALDFDGNEKRVIESIRIAHDKNAKFRTGPELELSGYGCEDHFLETDTFQHC 68 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 ++ + + T D + +G P + N V L G I+ VR K+ L + + E Sbjct: 69 WESLAHIITATSDLDMLMDIGMPALFKSTGYNCRVFLYRGRILLVRPKMLLADDGNYRES 128 Query: 127 RTF-----------------------------ISGYSNDPIVFRDIRLGILICEDIWKNS 157 R F + + D +G CE++W Sbjct: 129 RWFAPWPMERGLEEMLVPDVVLEAQPADVRQQTCPFGFGVVQLADCAVGCEACEELWAPE 188 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 N + G + + + + S + KLKKR +++ G S +Y N +G D Sbjct: 189 NPHTIMALDGVDIIANGSGSHHELRKLKKRLKLIAGATSKSGGVYLYANSMG------CD 242 Query: 218 GASFCFDGQQQLA 230 G FDG +A Sbjct: 243 GGRLYFDGSSLIA 255 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 12/113 (10%) Query: 377 IVAENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + +NIQ+R R +L L H++ ++L+T N E GY T Y SG NP Sbjct: 497 LALQNIQARSRMVMSFMLAQLLPHARRRGGYLLVLSTGNVDEALRGYLTKYDCSSGDINP 556 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVI-PPSILEKSPSAELRPHQTDQ 480 + + K + W +++ G L E++ P E P+ E P Q D+ Sbjct: 557 IGSISKGDLKSFLVWASTN---LGYPALAEIVQAPPTAELRPTVEGEPAQLDE 606 >gi|289208375|ref|YP_003460441.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thioalkalivibrio sp. K90mix] gi|288944006|gb|ADC71705.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thioalkalivibrio sp. K90mix] Length = 299 Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 18/209 (8%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKKSFIQACSSAID 71 G +A N+ +A +A G L++ EL Y D+ + I S+ Sbjct: 16 AGSVAANLDATAQAVADAATGGARLVVLAELHTGPYFCQTEDPDVFDRAEPIPGPST--K 73 Query: 72 TLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTF 129 L D G +V + GV N+ ++ +A G+ + K+++P+ ++EK F Sbjct: 74 RLGQIARDNGVVLVTSLFERRAAGVYHNTAIVFEADGHPAGLYRKMHIPDDPGYYEKYYF 133 Query: 130 ISGYSN-DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-----YHNK 183 G + PI RLG+L+C D W + + GA+ L A + + Sbjct: 134 TPGDTGFAPIDTSVGRLGVLVCWDQWY-PEAARIMALSGAQCLIYPTAIGWDPRDEADEQ 192 Query: 184 LKKRHEIVTGQISHV---HLPIIYVNQVG 209 ++R +T Q H +LP++ N+ G Sbjct: 193 TRQREAWITVQRGHAVANNLPVLACNRTG 221 >gi|156549473|ref|XP_001604185.1| PREDICTED: similar to GA22140-PA [Nasonia vitripennis] Length = 714 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 73/202 (36%), Gaps = 25/202 (12%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +A+ LN D GN + ++ + A G EL I GY ED ++ Sbjct: 1 MGRTATVAVCTLNQWAMDFEGNSRRILQSIQTAKEAGATYRSGPELEICGYSCEDHFYES 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + C + L + VG P + N V I+ +R K+ L Sbjct: 61 DTLLHCWEVLAGLLKAPECEDILVDVGMPVMHKNVTYNCRVAFLNRRILLIRPKMYLCED 120 Query: 121 SEFHEKRTF-----------------ISGYSNDP--------IVFRDIRLGILICEDIWK 155 + E R F I+ +N+ I RD +G ICE++W Sbjct: 121 GNYRETRWFSPWTKERTVEDYFLPRMIAQITNETRVPFGDAVISTRDTCIGFEICEELWN 180 Query: 156 NSNICKHLKKQGAEFLFSLNAS 177 S+ + G E + + +AS Sbjct: 181 PSSNHIPMALDGVEIISNGSAS 202 Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 67/266 (25%) Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS--------ALCAAIAVDALGKENV 321 +EE + AC L DY++++ + LSGG+DS ++C I V+++ K ++ Sbjct: 337 EEEISMAPACWLW--DYLRRSCQGGFFLPLSGGVDSSSTACLVYSMCCMI-VESVNKGDM 393 Query: 322 QTIM--------LPYKYTSPQSLED--------------------AAACAKALGCKYDVL 353 Q I Y T P+ L + AA A +G + + Sbjct: 394 QVITDIRKIVGDPEYVPTDPKQLCNTLLVTCYMATENSSAETKGRAAELASQIGSYHHSI 453 Query: 354 PIHDLVNHFFSLMSQFLQEEPS----------GIVAENIQSRIR-------GNILMALSN 396 I ++ + Q + P + +NIQ+RIR +++ + Sbjct: 454 VIDTAISAILGIFQQVTKLTPKFKVQGGSPRENLALQNIQARIRMVIAYLFAQLMLWVRG 513 Query: 397 HSKAML-LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ-LASWRNSHGITSGLG 454 +L L +SN E GY T Y S NP+ + K + + LA +R + + Sbjct: 514 RPGGLLVLGSSNVDEALRGYFTKYDCSSADVNPIGGIAKNDLKRFLAFFRKKYNL----- 568 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQ 480 P + ILE P+AEL P Q Q Sbjct: 569 PAID----QILEAQPTAELEPLQGGQ 590 >gi|293567698|ref|ZP_06679041.1| NAD+ synthetase [Enterococcus faecium E1071] gi|291589633|gb|EFF21438.1| NAD+ synthetase [Enterococcus faecium E1071] Length = 274 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 86/219 (39%), Gaps = 39/219 (17%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIA-------VDALGKENVQTIMLPYKYTSPQ 334 ++ Y++K F K ++G+SGG DS L +A + EN Q I + Y Sbjct: 30 MKVYLKKYPFLKTFVLGISGGQDSTLAGRLAQLTMEEMREETKDENYQFIAVRLPYGEQA 89 Query: 335 SLEDAAAC----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---AENIQSRIR 387 EDA A + + ++ P D Q L E GI NI++R R Sbjct: 90 DEEDAKAALDFIQPDVSLRVNIKPAVDA-------QVQVLSEAGVGISDFNKGNIKARQR 142 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ +L T + +E G+ T +GD PL L K Q QL N+ Sbjct: 143 MITQYAVAGERAGAVLGTDHAAENITGFFTKFGDGGADILPLFRLDKRQGKQLLQALNA- 201 Query: 448 GITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 P + K P+A+L +P D+ +L Sbjct: 202 -------------PEKLYTKIPTADLEDGKPMIADEVAL 227 >gi|187735150|ref|YP_001877262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Akkermansia muciniphila ATCC BAA-835] gi|205811102|sp|B2UPK4|MNMA_AKKM8 RecName: Full=tRNA-specific 2-thiouridylase mnmA gi|187425202|gb|ACD04481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Akkermansia muciniphila ATCC BAA-835] Length = 357 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 10/86 (11%) Query: 294 KVIIGLSGGIDSALCAAIAV----DALG---KENVQTIMLPYKYTSPQSLEDAAACAKAL 346 ++++GLSGG+DS++ AA+ V D +G K V +P + Q ++DA A AK Sbjct: 3 RILVGLSGGVDSSVAAALLVEQGHDVVGAYMKNWVNDEGIPGECPWEQDIQDALAVAKTT 62 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQE 372 G ++ V+ DLV+ + + + +L E Sbjct: 63 GIEFRVI---DLVDEYRARIVNYLIE 85 >gi|182418180|ref|ZP_02949480.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium butyricum 5521] gi|237666216|ref|ZP_04526203.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377998|gb|EDT75538.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium butyricum 5521] gi|237658306|gb|EEP55859.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 257 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 19/223 (8%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLVFKKSFIQ 64 I I Q++ DI N+ K +EA + ++L+LF E+ ++G+ + F + I Sbjct: 3 IGIVQMDIEWEDIYRNMNKIEGFVKEACEKKIELLLFPEMSLTGFTMDIDKHTFSEKEIS 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S I S G G++V D++G+ +++ + GNIIA KI+ +Y Sbjct: 63 NWISKIAVRYSMNIGIGFGVIV-----DEKGLNKYMIVSNEGNIIADYSKIHPFSYG--G 115 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E + + G +DI + IC D+ + I + K+ + N Sbjct: 116 EDKKYYKGNDIIDCSLKDINITPFICYDL-RFPEIFQIASKKSELICVAANWPG------ 168 Query: 185 KKRHEIVTGQISHV---HLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + +T I+ I +N+VG D + ++GAS D Sbjct: 169 KRENHWITLLIARAIENQCYIAGINRVGTGDGIYYNGASMIID 211 >gi|40890131|gb|AAR97410.1| nitrilase [uncultured organism] Length = 337 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 22/166 (13%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE------DL 56 +K K+A+ Q PV D+ + K E+A QG LI F E FI GYP + Sbjct: 6 QKYKVAVVQAAPVFLDLDATVDKTIALIEQAAAQGAKLIAFPETFIPGYPWQIWLGAPAW 65 Query: 57 VFKKSFIQAC--------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGN 107 + F+Q S + ++ V+G +D + + +I G Sbjct: 66 AIGRGFVQRYFDNSLSFDSPQAEKIRKAVKRAKLTAVIGVSERDGGSLYIGQWLIGPDGE 125 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVF--RDI-RLGILIC 150 IA R K+ P ++ E+ F G +D V D+ RLG + C Sbjct: 126 TIAKRRKLR-PTHA---ERTVFGEGDGSDLAVHDRADVGRLGAMCC 167 >gi|56807785|ref|ZP_00365638.1| COG0171: NAD synthase [Streptococcus pyogenes M49 591] gi|209559787|ref|YP_002286259.1| NAD synthetase [Streptococcus pyogenes NZ131] gi|209540988|gb|ACI61564.1| NAD synthetase [Streptococcus pyogenes NZ131] Length = 282 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 38 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETSDQAYQFIAVRLPYGVQA 97 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL + P L +N ++ Q + +G+ NI++R R Sbjct: 98 DEADAQKALAF---IAPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 154 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 155 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 205 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 206 VLGA-----DAALYEKVPTADLEDQKPGLADEVALGVTYQDIDDYLE 247 >gi|15598794|ref|NP_252288.1| hypothetical protein PA3598 [Pseudomonas aeruginosa PAO1] gi|107103112|ref|ZP_01367030.1| hypothetical protein PaerPA_01004181 [Pseudomonas aeruginosa PACS2] gi|116051596|ref|YP_789566.1| hypothetical protein PA14_17730 [Pseudomonas aeruginosa UCBPP-PA14] gi|254236514|ref|ZP_04929837.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|296387898|ref|ZP_06877373.1| hypothetical protein PaerPAb_07079 [Pseudomonas aeruginosa PAb1] gi|313108956|ref|ZP_07794931.1| hypothetical protein PA39016_001640001 [Pseudomonas aeruginosa 39016] gi|9949754|gb|AAG06986.1|AE004780_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115586817|gb|ABJ12832.1| putative carbon-nitrogen hydrolase family protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126168445|gb|EAZ53956.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|310881433|gb|EFQ40027.1| hypothetical protein PA39016_001640001 [Pseudomonas aeruginosa 39016] Length = 271 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 26/234 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV--FKKSF 62 +K+ + Q+ GD A N+ +A A + +L++F E ++G+P ED + + Sbjct: 1 MKVELVQIAGRDGDTAHNLERALAAIADCAAD-TELVVFPETHLTGFPSEDNIAALAEPL 59 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 SA+ + + + + +G D N+ +++ A + IA++ Y + Sbjct: 60 DGPTVSAVQRVARERN---VSVAIGIAEADAGRYYNTTLLI-APDGIALK-------YRK 108 Query: 123 FH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS- 177 H ++ F G ++ IR+G+L+C DI + + L + GAE + N + Sbjct: 109 THLWASDRGIFTPGDRYATALWNGIRVGLLVCFDI-EFPESARALGQLGAELIIVTNGNM 167 Query: 178 -PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFDGQQQL 229 PY R I+ + + ++ VN+VG G L+F G S D QL Sbjct: 168 DPY---GPTHRTAIMARAMENQAYAVM-VNRVGHGDGGLVFAGGSAVVDPYGQL 217 >gi|332366375|gb|EGJ44126.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK355] Length = 274 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRSETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTKAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|289665780|ref|ZP_06487361.1| putative carbon-nitrogen hyrolase family protein [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289671211|ref|ZP_06492286.1| putative carbon-nitrogen hyrolase family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 294 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 18/208 (8%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVFKKSFIQACSSAID 71 GD N+A EA QG L+L EL Y E+ + + + Sbjct: 17 GDAEANLAVIESRVAEAAAQGAKLVLLQELHNGAYFCQHESVEEFDLAEPIPGPSTERLS 76 Query: 72 TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFI 130 TL G + F R+ N+ V+ + G ++ K+++P+ F+EK F Sbjct: 77 TLAK--QHGVVLVASLFERRAAGLYHNTAVVFEKDGRLLGKYRKMHIPDDPGFYEKFYFT 134 Query: 131 SG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY-----YHNKL 184 G PI RLG+L+C D W + + GAE L A + + Sbjct: 135 PGDLGFTPINTSVGRLGVLVCWDQWY-PEAARLMALAGAELLLYPTAIGWDPDDQQPEQE 193 Query: 185 KKRHEIVTGQISHV---HLPIIYVNQVG 209 ++R + H +P++ N+VG Sbjct: 194 RQRDAWILSHRGHAVANGVPVLSCNRVG 221 >gi|322419745|ref|YP_004198968.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Geobacter sp. M18] gi|320126132|gb|ADW13692.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Geobacter sp. M18] Length = 356 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 20/153 (13%) Query: 294 KVIIGLSGGIDSALCAAI----AVDALG------KENVQTIMLPYKYTSPQSLEDAAACA 343 ++++ +SGG+DS++ AA+ D +G + QT+ S + DAA A Sbjct: 6 RIVVAMSGGVDSSVTAALLKEQGHDVIGVSLQLYERPEQTVSGGKTCCSLTDVMDAARVA 65 Query: 344 KALGCKYDVLPIHDLVNHFFSL-MSQFLQEEPSGIV---AENIQSRIRGNILMALSNHSK 399 + LG + V+ DL F L + F+ E +G RI+ +L+ L+ Sbjct: 66 RRLGIPFQVI---DLRERFRELVIDDFITEYAAGRTPNPCARCNERIKFGLLLELTASFD 122 Query: 400 AMLLTTSNKSEISV-GYGTLYGDMSGGFNPLKD 431 A LL T + + I G GT + G +P KD Sbjct: 123 ADLLATGHYARIEADGTGTY--QLLKGLDPRKD 153 >gi|145637056|ref|ZP_01792719.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae PittHH] gi|145269710|gb|EDK09650.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae PittHH] Length = 227 Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 30/60 (50%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKENV+ I Y LE A A A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKACAIAQDLGIK 66 >gi|257885441|ref|ZP_05665094.1| NAD synthase [Enterococcus faecium 1,231,501] gi|293553276|ref|ZP_06673912.1| NAD+ synthetase [Enterococcus faecium E1039] gi|257821297|gb|EEV48427.1| NAD synthase [Enterococcus faecium 1,231,501] gi|291602500|gb|EFF32716.1| NAD+ synthetase [Enterococcus faecium E1039] Length = 274 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 85/216 (39%), Gaps = 33/216 (15%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIA-------VDALGKENVQTIMLPYKYTSPQ 334 ++ Y++K F K ++G+SGG DS L +A + EN Q I + Y Sbjct: 30 MKAYLKKYPFLKTFVLGISGGQDSTLAGRLAQLTMEEMREETKDENYQFIAVRLPYGEQA 89 Query: 335 SLEDAAAC----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 EDA A + + ++ P D S + + G NI++R R Sbjct: 90 DEEDAKAALDFIQPDVSLRVNIKPAVDAQVQVLSEAGVEISDFNKG----NIKARQRMIT 145 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +L T + +E G+ T +GD PL L K Q QL N+ Sbjct: 146 QYAVAGERAGAVLGTDHAAENITGFFTKFGDGGADILPLFRLDKRQGKQLLQALNA---- 201 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 P + K P+A+L +P D+ +L Sbjct: 202 ----------PEKLYTKIPTADLEDGKPMIADEVAL 227 >gi|311748632|ref|ZP_07722417.1| nitrilase 4 [Algoriphagus sp. PR1] gi|126577158|gb|EAZ81406.1| nitrilase 4 [Algoriphagus sp. PR1] Length = 305 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 30/175 (17%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP----------- 52 K+K+ + Q +PV D + K R E+ ++G LI+F E FI GYP Sbjct: 2 KVKVCLVQESPVFFDKEKTLQKLERLCEKYAKEGNQLIVFPESFIPGYPRGFSFGAKIGS 61 Query: 53 --PEDLVFKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVL-NSVVILD 104 PE + + Q S + L+ H +V G R Q G L S++ + Sbjct: 62 RTPEGRDLYEEYYQNSFDLDSEDLTRLEKLCHQLNIYLVCGVTERMKQHGSLYCSMIYIS 121 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKN 156 ++ V KI P E R + S D +V D +LG LIC W+N Sbjct: 122 PKGLLGVHRKIK-PTGIE----RLVWAEASGDSLVTFDTKIGKLGGLIC---WEN 168 >gi|71736399|ref|YP_272887.1| NAD synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482387|ref|ZP_05636428.1| NAD synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|123638398|sp|Q48NY2|NADE_PSE14 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|71556952|gb|AAZ36163.1| NAD+ synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320321861|gb|EFW77957.1| NAD synthetase [Pseudomonas syringae pv. glycinea str. B076] gi|320331032|gb|EFW87006.1| NAD synthetase [Pseudomonas syringae pv. glycinea str. race 4] gi|330872276|gb|EGH06425.1| NAD synthetase [Pseudomonas syringae pv. glycinea str. race 4] gi|330984540|gb|EGH82643.1| NAD synthetase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009781|gb|EGH89837.1| NAD synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 275 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 +++ +Q +++G+SGG+DS +A A+ + T + LPY + Sbjct: 35 IKECLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRASTGDNSYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPASSVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ + +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYQGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|305664935|ref|YP_003861222.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Maribacter sp. HTCC2170] gi|88707765|gb|EAR00005.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Maribacter sp. HTCC2170] Length = 310 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 32/184 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-PEDLVFKKSFI 63 + I++AQ P GD N++ R+ E+A DLI F E+ I+ Y +DL ++ I Sbjct: 1 MNISVAQFQPKDGDKIYNLSIIRKLAEKAKSNAADLISFHEMSITAYTFTKDLTLEQ--I 58 Query: 64 QACSSAIDTLKSD------THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 + + KS + + G I+ G + + N+ + + ++A Sbjct: 59 TELAEEVPNGKSTQELIAISKELGIPILAGLVEKYDGKIYNTYICVTGDGVVA------- 111 Query: 118 PNYSEFHEKRTFISGY---SNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQ---GAE 169 Y + H FIS + N+ VF + + GILIC D +N+ ++++ GAE Sbjct: 112 -KYRKIH---PFISKHMSAGNEYCVFDLLGWKCGILICYD----NNVIENVRATSLLGAE 163 Query: 170 FLFS 173 +F+ Sbjct: 164 LIFA 167 >gi|224372279|ref|YP_002606651.1| putative N-carbamoylputrescine amidohydrolase [Nautilia profundicola AmH] gi|223589615|gb|ACM93351.1| putative N-carbamoylputrescine amidohydrolase [Nautilia profundicola AmH] Length = 295 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 2/111 (1%) Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKINLPNY 120 + ++ ++ + + + G +V + +G+ N+ V+ D G I K ++P+ Sbjct: 55 YAESFEDDVEFWRKVSEEQGIVLVTSLFEKVMDGIYYNTAVVFDKGKIAGKYRKNHIPDD 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+EK F G +PI RLG+L+C D W + + +GAE L Sbjct: 115 PGFYEKFYFTPGDEIEPIDTSVGRLGVLVCWDQW-YPEAARIMALKGAEVL 164 >gi|295663348|ref|XP_002792227.1| aliphatic nitrilase [Paracoccidioides brasiliensis Pb01] gi|226279402|gb|EEH34968.1| aliphatic nitrilase [Paracoccidioides brasiliensis Pb01] Length = 356 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 6/66 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVF 58 L++AI Q PV D+ + K + EEA + G LI F E +I GYP P D Sbjct: 6 LRVAITQAEPVYLDLDATVEKTVKIIEEAAQGGAKLIAFPECWIPGYPGWIWNRPVDPAM 65 Query: 59 KKSFIQ 64 +IQ Sbjct: 66 NTRYIQ 71 >gi|40890119|gb|AAR97404.1| nitrilase [uncultured organism] Length = 358 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 26/173 (15%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K ++ A QLNPV+ G + K +A +A QG+ LI+F E + YP V Sbjct: 5 KIVRAAAVQLNPVLDSADGTLVKVLQAIADAAAQGVQLIVFPETVVPYYPYFSFVTPAVS 64 Query: 63 IQAC-------SSAIDTLKSDTHDGGAG-----IVVGFPRQDQEGVLNSVVILDAGNIIA 110 + A S + +D A +V+G +D + N+ +I DA + Sbjct: 65 MGAAHLKLYEQSPTVPGPLTDAVAAAARAHQMVVVLGVNERDHGTLYNTQLIFDADGTLP 124 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIR-----LGILICEDIWKNSN 158 ++ + P Y HE+ + G D R ++ +G L C W++ N Sbjct: 125 LKRRKITPTY---HERMVWGMG---DGSGLRTVKTEVGTVGALAC---WEHYN 168 >gi|260893751|ref|YP_003239848.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ammonifex degensii KC4] gi|260865892|gb|ACX52998.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ammonifex degensii KC4] Length = 265 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 15/180 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-VFK 59 M K+ AI QL V D N+A+A A QG +L++ +E+F+ Y ++ Sbjct: 1 MASKVCAAICQLR-VTADKKANLARAGELIRLARDQGAELVVLSEMFVCPYANHLFPLYA 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 +SF A+ L S + +V G P ++ + + N+ + D G +IA KI+L Sbjct: 60 ESF--PAGEALSFLSSVAREERIYLVGGSLPEKEGDYLYNTSFVFDPEGKLIARYRKIHL 117 Query: 118 PN----YSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFL 171 + + + E F G + +VF ++G+ IC D+ + ++ + + ++GA+ + Sbjct: 118 FDVDLPHLRYRESEVFQPG--KEVVVFPTPWGKVGLAICFDL-RFPSLFREMVRRGAKII 174 >gi|298484894|ref|ZP_07002993.1| NAD synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160581|gb|EFI01603.1| NAD synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 275 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 +++ +Q +++G+SGG+DS +A A+ + T + LPY + Sbjct: 35 IKECLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRASTGDNSYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPASSVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ + +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYQGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|50914749|ref|YP_060721.1| NAD synthetase [Streptococcus pyogenes MGAS10394] gi|50903823|gb|AAT87538.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pyogenes MGAS10394] Length = 288 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 44 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETGDQAYQFIAVRLPYGVQA 103 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL + P L +N ++ Q + +G+ NI++R R Sbjct: 104 DEADAQKALAF---IAPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 160 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 161 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 211 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 212 VLGA-----DAALYEKVPTADLEDQKPGLADEVALGVTYQDIDDYLE 253 >gi|313676372|ref|YP_004054368.1| asparagine synthase (glutamine-hydrolyzing) [Marivirga tractuosa DSM 4126] gi|312943070|gb|ADR22260.1| asparagine synthase (glutamine-hydrolyzing) [Marivirga tractuosa DSM 4126] Length = 631 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 7/117 (5%) Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYK-YTSPQSLEDAAACAKALGCKYDV--LPI 355 LSGG+DS++ +AIA + E++ T + YK ++ E A A AK +G K+ V L + Sbjct: 264 LSGGVDSSIISAIAAKKV--ESLHTFSIGYKGHSFFDETEYANAVAKHIGSKHQVFSLSL 321 Query: 356 HDLVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 DL + L+ F + + S + + + N+ +ALS L NK E Sbjct: 322 DDLYGYLPKLLKSFSEPFADSSALPVYALSQLTKENVTVALSGDGADELFAGYNKHE 378 >gi|306829817|ref|ZP_07463004.1| NAD+ synthetase [Streptococcus mitis ATCC 6249] gi|304427828|gb|EFM30921.1| NAD+ synthetase [Streptococcus mitis ATCC 6249] Length = 274 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 44/261 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLP-IHDLVNHFFSLMSQFLQEEPSG 376 + LPY + + EDA KAL + P + +VN S+ + L E +G Sbjct: 75 SYQFVAVRLPYGVQADE--EDAQ---KALAF---IQPDVSVVVNIKDSVDAMALAVEATG 126 Query: 377 -----IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 NI++R R AL+ ++ T + +E G+ T +GD PL Sbjct: 127 SPMTDFNKGNIKARSRMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K R + LG P++ EK P A+L +P D+ +L Y Sbjct: 187 LNK---------RQGKLLLIELGA-----DPALYEKVPVADLEEDKPGLADEVALGVTYA 232 Query: 488 ILDDII--KRIVENEESFINN 506 +DD + K I ++ I N Sbjct: 233 EIDDYLEGKTISPEAQAIIEN 253 >gi|218781905|ref|YP_002433223.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfatibacillum alkenivorans AK-01] gi|218763289|gb|ACL05755.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Desulfatibacillum alkenivorans AK-01] Length = 506 Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 17/162 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---PEDLV 57 M L+I + LN + N A +A G +I+ TE+ +SGY +D+ Sbjct: 1 MTHALRIGLIHLNVQYKEPEQNRAALVELNRKAADHGAKIIVNTEMGVSGYSFTGRQDVF 60 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQE-GVL--NSVVILDAGNIIAVRDK 114 + S + L + A IVVG P +D+ G++ ++VVI G ++ K Sbjct: 61 PLAEPLSGPS--VSALAPIARENQAYIVVGMPEKDESTGIMYNSAVVIGPEGQVVCTYRK 118 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIW 154 +N E R G N VF+ ++G+LIC D + Sbjct: 119 VN-------GEARWACPGSENQNPVFKTPWGKVGVLICSDTY 153 >gi|40890079|gb|AAR97384.1| nitrilase [uncultured organism] Length = 310 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 35/172 (20%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK------ 59 +IAI Q PV+ D + IA+A ++ EA QG LI+ E +I GYP +++ Sbjct: 3 RIAIIQRPPVLLDRSATIARAVQSVAEAAAQGATLIVLPESYIPGYP--SWIWRLAPGKD 60 Query: 60 ------------KSFIQACSSAIDTLKSDTHDGGAGIVVGF---PRQDQEGVL-NSVVIL 103 + + S+ +D L G IV G R+ G L N+VV++ Sbjct: 61 GAIVGQLHARLLANAVDLSSTDLDALLEAARQHGVTIVCGMNECERRRGGGTLYNTVVVI 120 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILIC 150 ++ R + +P E + G+ D + + RLG LIC Sbjct: 121 GPDGVMLNRHRKLMPTNPE-----RMVHGF-GDASGLKAVDTPAGRLGTLIC 166 >gi|23100566|ref|NP_694033.1| hypothetical protein OB3111 [Oceanobacillus iheyensis HTE831] gi|22778799|dbj|BAC15067.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 261 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 22/225 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDL--VFKKS 61 ++ AI Q++ V G+ N K + E+ ++ +D+I+ E++ +GY DL V + Sbjct: 1 MRHAIYQMDIVPGNPEANRTKVKTWIEQTVSKNDIDIIVLPEMWTTGYTLADLNEVADEG 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDA-GNIIAVRDKINLPN 119 CS L+ + I+ G + G + N+ ++++ G + DKI+L Sbjct: 61 EEPTCS----FLQQLARENQVHIIAGSIANKRNGKIYNTAIVVNRNGEKVYTYDKIHL-- 114 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 ++ T+++G F I++G++IC D+ + + + L GAE ++ + Sbjct: 115 -VPMLDEPTYLNGGEEKVRTFELDGIKMGLIICYDL-RFPELTRSLAVSGAEVIYIVAEW 172 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 P K ++ + II N+VG IF+ FC Sbjct: 173 PSARKDHWKNLQLARAIENQCF--IISANRVG-----IFNNVEFC 210 >gi|330886849|gb|EGH20284.1| NAD synthetase [Pseudomonas syringae pv. mori str. 301020] Length = 275 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 +++ +Q +++G+SGG+DS +A A+ + T + LPY + Sbjct: 35 IKECLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRASTGDNSYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPASSVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ + +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYQGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|261419170|ref|YP_003252852.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y412MC61] gi|319765987|ref|YP_004131488.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y412MC52] gi|261375627|gb|ACX78370.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y412MC61] gi|317110853|gb|ADU93345.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Geobacillus sp. Y412MC52] Length = 270 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 11/223 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA QL+ GD N +A A E A + G ++I+ EL+ +GY DL Sbjct: 3 IRIACLQLDIAFGDPNENERRAESAIESAVKDGANIIVLPELWTTGY---DLTRLDEIAD 59 Query: 65 ACSSAIDTLKSD-THDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 + S T +V G ++ GV N++++ D G I+ K++L + Sbjct: 60 EGAERAKAFASRLTQAHSIHLVAGSVAKKTTTGVTNTIIVADRNGQIVGEYSKLHL--FQ 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 +E G S + +IC DI I H GAE LF + P Sbjct: 118 LMNEHLYLQPGSSLGLFSLDGLSCAGVICYDIRFPEWIRAH-ALAGAEVLFVVAEWPL-- 174 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +L ++ + ++ N+ G +F G S D Sbjct: 175 PRLHHWRTLLMARAIENQCYVVACNRAGRDPNNVFAGHSLVID 217 >gi|157150890|ref|YP_001449899.1| NAD synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|189030731|sp|A8AVT9|NADE_STRGC RecName: Full=NH(3)-dependent NAD(+) synthetase gi|157075684|gb|ABV10367.1| NAD+ synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 274 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 36/244 (14%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETRDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + LPY Q+ ED A KAL + + + M++ ++ + + Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQ--KALTFIQPDVSLTVNIKESADAMTRAVEATGAKV 129 Query: 378 V---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 NI++R R AL+ ++ T + +E + T +GD PL L K Sbjct: 130 SDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLNK 189 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 Q QL + LG P++ EK P+A+L +P D+ +L Y +D Sbjct: 190 RQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEID 235 Query: 491 DIIK 494 D ++ Sbjct: 236 DYLE 239 >gi|40890197|gb|AAR97443.1| nitrilase [uncultured organism] Length = 354 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 23/165 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K K+A Q P D+ ++ KA R +EA G LI F E FI GYP Sbjct: 7 KFKVAAVQAAPAFLDLDASVEKAVRLIDEAGAAGARLIAFPETFIPGYPWWIWLGAPAWA 66 Query: 58 FKKSFI--------QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 + F+ Q + D L++ + +G +D + + +I G Sbjct: 67 IMRGFVSRYFDNSLQYGTPEADRLRAAAKRNKMFVALGLSERDGGSLYIAQWIIGPDGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILIC 150 +A R K+ H +RT + ++ R+G L C Sbjct: 127 VATRRKLK-----PTHAERTVFGEGDGSHLAVHELDIGRVGALCC 166 >gi|139473306|ref|YP_001128021.1| NAD synthetase [Streptococcus pyogenes str. Manfredo] gi|68052495|sp|Q5XAM5|NADE_STRP6 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|189030733|sp|A2RD51|NADE_STRPG RecName: Full=NH(3)-dependent NAD(+) synthetase gi|134271552|emb|CAM29776.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pyogenes str. Manfredo] Length = 274 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + +T Y++ + P ++ Sbjct: 30 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREETGDQAYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL + P L +N ++ Q + +G+ NI++R R Sbjct: 90 DEADAQKALAF---IAPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 198 VLGA-----DAALYEKVPTADLEDQKPGLADEVALGVTYQDIDDYLE 239 >gi|254804409|ref|YP_003082630.1| putative aluminum resistance protein [Neisseria meningitidis alpha14] gi|254667951|emb|CBA04189.1| putative aluminum resistance protein [Neisseria meningitidis alpha14] Length = 219 Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 13/94 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A+ A+ LG K V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERASWIAQDLGVKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI-VAEN 381 L + SLM Q L ++ + I AEN Sbjct: 64 LDL--------SLMRQITHNALMDDTAAIETAEN 89 >gi|222102126|ref|YP_002546716.1| amidohydrolase/nitrilase [Agrobacterium radiobacter K84] gi|221728243|gb|ACM31252.1| amidohydrolase/nitrilase [Agrobacterium radiobacter K84] Length = 324 Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 21/163 (12%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP----EDLVFKKS 61 K+A Q P DIA + KA EEA R G LI F E+++ GYP + + Sbjct: 7 KVAAVQAAPEFLDIAKGVDKAISLIEEAARNGASLIAFPEVWLPGYPWWIWLDSPAWGMQ 66 Query: 62 FI--------QACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVR 112 F+ + + + L+ +V+GF R + + D G IIA R Sbjct: 67 FVGRYFANAMEVGDAHYERLREAATVNSIHVVMGFTERAGGSLYIAQAIFSDKGEIIANR 126 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICED 152 K+ P H +RT I R+G L C + Sbjct: 127 RKLK-PT----HAERTVFGEGDGSHIAVHTTELGRMGALCCAE 164 >gi|40716519|gb|AAR88792.1| CyaB [Burkholderia cepacia] Length = 137 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K K A Q +PV D+A + K+ R +EA G L+ F E F+ GYP Sbjct: 9 KFKAAAVQASPVYLDLAATVEKSCRIIDEAAANGARLVAFPEAFLPGYP 57 >gi|306836790|ref|ZP_07469750.1| NAD+ synthetase [Corynebacterium accolens ATCC 49726] gi|304567336|gb|EFM42941.1| NAD+ synthetase [Corynebacterium accolens ATCC 49726] Length = 273 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 31/239 (12%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI---AVDALGKENVQTI 324 P + E + V L +Y++ + ++G+SGG DS L + AV+ + + Sbjct: 23 PFIDPEEEIARRVDFLVEYLEMTHAKGYVLGISGGQDSTLAGKLTQLAVERVEGAEFWAV 82 Query: 325 MLPYKYTSPQSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA 379 LP+ Q+ ED A A D+ P ++H + Q+ + Sbjct: 83 RLPH---GTQADEDDAQIALDFIQPDHRLTVDIQPATAALSH--EVARAVGQDSLNDFNR 137 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N ++R+R A++ A+++ T + +E + T +GD + PL L K Sbjct: 138 GNSKARLRMTAQYAIAGEVGALVVGTDHAAENVTAFYTKWGDGAADLLPLAGLNK----- 192 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 R + LG P S K P+A+L +P D+E+L Y +DD ++ Sbjct: 193 ----RQGAALLKHLG-----APESTWSKVPTADLEDDKPQLPDEEALGVTYTHIDDYLE 242 >gi|289623763|ref|ZP_06456717.1| NAD synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646555|ref|ZP_06477898.1| NAD synthetase [Pseudomonas syringae pv. aesculi str. 2250] gi|330865915|gb|EGH00624.1| NAD synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 275 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 +++ +Q +++G+SGG+DS +A A+ + T + LPY + Sbjct: 35 IKECLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRASTGDNSYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPASSVDFVLGNTKARMRMIAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ + +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYQGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|170088540|ref|XP_001875493.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650693|gb|EDR14934.1| predicted protein [Laccaria bicolor S238N-H82] Length = 304 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 29/221 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRA--REEANRQGMDLILFTELFISGYP------- 52 LK +A+ QL + + A N+ AR + + + DL++ E F S Y Sbjct: 9 LKPFTLALIQLGNISPNKADNLKHAREMILKAASVDKKPDLVVLPECFNSPYGHVHFPVY 68 Query: 53 PEDLVFKK----SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQD--QEGVLNSVVILDA 105 E++ + S ++ S ++ L S + G ++ G P +D V N+ + + Sbjct: 69 AENIGYYPGKPYSVPESKSESVQMLSSAAKETGTWLIGGSIPERDLTSNKVYNTCTVYNP 128 Query: 106 -GNIIAVRDKINL-----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 G+++A+ KI+L P +F E T G + R+G+ IC DI + + Sbjct: 129 KGDLVAIHRKIHLFDIDIPGKIKFKESETLTGGANLSSFDTEFARIGLGICYDI-RFPEL 187 Query: 160 CKHLKKQGAEFL-----FSLNASPYYHNKLKKRHEIVTGQI 195 +QG + L F+L P H +L +R V Q+ Sbjct: 188 AMIAARQGCQMLIYPGAFNLTTGP-LHWELLQRSRAVDNQV 227 >gi|116333197|ref|YP_794724.1| NAD synthetase [Lactobacillus brevis ATCC 367] gi|122270114|sp|Q03SX9|NADE_LACBA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|116098544|gb|ABJ63693.1| NH(3)-dependent NAD(+) synthetase [Lactobacillus brevis ATCC 367] Length = 276 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 40/231 (17%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y+Q+ +F K +++G+SGG DS L + A+ + +T + LPY Sbjct: 31 LKAYLQRYDFMKTLVLGISGGQDSTLTGLLCEQAVTELRQETGDNDYRFIAVRLPY---G 87 Query: 333 PQSLEDAAACAKALG-----CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 Q+ ED A A + ++ P D + + + + G N+++R R Sbjct: 88 EQADEDDAMMAIDFMDADEVQRVNIKPATDAMIQAVETSGKPISDFNKG----NVKARQR 143 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 A++ ++ T + +E G+ T YGD + P+ L K R Sbjct: 144 MIAQYAIAGARSGAVVGTDHAAEAVTGFYTKYGDGATDICPIWRLDK---------RQGA 194 Query: 448 GITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + + LG P + +K P+A+L RP D+ +L Y +DD ++ Sbjct: 195 AMLAQLGA-----PEHLYKKVPTADLEDDRPALPDEAALGVRYEDIDDYLE 240 >gi|315638443|ref|ZP_07893620.1| para-aminobenzoate synthase [Campylobacter upsaliensis JV21] gi|315481434|gb|EFU72061.1| para-aminobenzoate synthase [Campylobacter upsaliensis JV21] Length = 290 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 17/157 (10%) Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKN 156 +VV G+I K+++P+ F+EK F G +PI RLG+LIC D W Sbjct: 96 TAVVFEKDGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSVGRLGVLICWDQW-Y 154 Query: 157 SNICKHLKKQGAEFLFSLNASPYYH---NKLKKR--HEIVTGQISHV---HLPIIYVNQV 208 + + +GAE L A ++ N+ K+R H + Q +H L ++ +N+V Sbjct: 155 PEAARIMALKGAEILIYPTAIGWFDKDTNEEKERQLHAWLGIQKAHAIANGLYVVAINRV 214 Query: 209 GG-------QDELIFDGASFCFDGQQQLAFQMKHFSE 238 G QD + F G SF + Q + F SE Sbjct: 215 GFEKDKSGVQDGIRFWGNSFIYGPQGEELFLADKESE 251 >gi|194709267|pdb|3DPI|A Chain A, Crystal Structure Of Nad+ Synthetase From Burkholderia Pseudomallei gi|194709268|pdb|3DPI|B Chain B, Crystal Structure Of Nad+ Synthetase From Burkholderia Pseudomallei Length = 285 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ ++G+SGGIDS+ A +AV+ L + LPY + Sbjct: 39 DYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG-----AQH 93 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGN 389 D A +AL DV P D + + + V NI++R R Sbjct: 94 DEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMI 153 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ +++ T + +E +G+ T +GD PL L K +V LA + Sbjct: 154 AQYAVAGARNGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRALARMLGAD-- 211 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 PL P + LE LRP + D+ + Y +DD ++ Sbjct: 212 ----EPLVLKTPTADLET-----LRPQRPDEHAYGITYEQIDDFLE 248 >gi|217073780|gb|ACJ85250.1| unknown [Medicago truncatula] Length = 271 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 27/205 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L KI + QL+ V D NIA AR A ++A +G LIL E++ S Y + Sbjct: 24 LTNFKIGLCQLS-VTSDKDKNIAHARTAIQDAAAKGAKLILLPEIWNSPYSNDSFPVYAE 82 Query: 62 FIQACSSA---------IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 I A A + +L T GG+ P + + + N+ + G + A Sbjct: 83 DIDAGGDASPSTAMLSELSSLLKITIVGGS-----IPERSGDRLYNTCCVFGTDGKLKAK 137 Query: 112 RDKINL-----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 KI+L P F E T +G + + R+GI IC DI + + + Sbjct: 138 HRKIHLFDIDIPGKITFIESLTLTAGDTPTIVDTEVGRIGIGICYDI-RFPELAMIYAAR 196 Query: 167 GAEFL-----FSLNASPYYHNKLKK 186 GA L F++ P + L++ Sbjct: 197 GAHLLCYPGAFNMTTGPLHWELLQR 221 >gi|75909219|ref|YP_323515.1| hypothetical protein Ava_3010 [Anabaena variabilis ATCC 29413] gi|75702944|gb|ABA22620.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 276 Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + +I SGG+DS L A IA D LG + + P+ LEDA A +G Sbjct: 15 TEMEQALIAYSGGVDSTLVAKIAYDVLGDRALAVTAVSPSLL-PEELEDAKIQAATIGIP 73 Query: 350 YDVLPIHDLVNHFFS 364 + V+ H++ N ++ Sbjct: 74 HKVVQTHEMDNPNYT 88 >gi|282164942|ref|YP_003357327.1| hypothetical protein MCP_2272 [Methanocella paludicola SANAE] gi|282157256|dbj|BAI62344.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 272 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 36/69 (52%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++ SGG+DS+ AVD LG + V + SP+ + A + AK LG ++ ++ Sbjct: 23 VLVAFSGGVDSSFLLKCAVDTLGTQKVAAATAVSEILSPEDFDLAESIAKDLGVRHVIVT 82 Query: 355 IHDLVNHFF 363 ++ N F Sbjct: 83 SSEMENAEF 91 >gi|219847634|ref|YP_002462067.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chloroflexus aggregans DSM 9485] gi|219541893|gb|ACL23631.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Chloroflexus aggregans DSM 9485] Length = 295 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 6/157 (3%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKK 60 + + + + Q+ D N+A+A A QG ++ ELF S Y ED Sbjct: 4 RIVNVGLVQMR-CTADPDTNLAQAEADIRTAAAQGAQIVCLPELFRSLYFCQSEDHANFA 62 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLP 118 + + L + + G IV + EG+ N+ V+LDA G + K+++P Sbjct: 63 LAEPVPGPSTERLSALAAELGVVIVASLFEKRAEGLYHNTAVVLDADGRYLGKYRKMHIP 122 Query: 119 NYSEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIW 154 + F+EK F G + R R+G+LIC D W Sbjct: 123 DDPLFYEKFYFTPGDLGFKVFKTRYARIGVLICWDQW 159 >gi|40890139|gb|AAR97414.1| nitrilase [uncultured organism] Length = 305 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 31/177 (17%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--------- 53 K++K+A AQ P +++ + K EA + G LI+F E F+SGYP Sbjct: 4 KEVKVAAAQFAPHFLNLSKTVEKTCNLISEAGKNGAKLIVFPEAFLSGYPDWVWLIPNGN 63 Query: 54 ----EDLV--FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVV-I 102 +DL ++ + S L D G + VG ++ E + N+++ I Sbjct: 64 STMLDDLYQELVENAVTIPDSTTQKLCQAAKDAGVYVAVGIHERNAEASGFTLFNTLLYI 123 Query: 103 LDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKN 156 D G+II K+ +P E R + D + D +LG L+C W+N Sbjct: 124 NDQGSIIGKHRKL-IPTGGE----RLVWGQGNGDTLAAFDTHFGKLGGLLC---WEN 172 >gi|91772279|ref|YP_564971.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanococcoides burtonii DSM 6242] gi|91711294|gb|ABE51221.1| Carbon-nitrogen hydrolase family protein [Methanococcoides burtonii DSM 6242] Length = 270 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 25/189 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ +KIA Q++ + NI KA EEA +G D+I+ E+F +G+ E+L ++ Sbjct: 7 VETIKIAAIQMDICHCNKQKNIKKALHFSEEAISKGADIIVLPEVFSTGFCYEEL---EN 63 Query: 62 FIQACS-SAIDTLKSDTHDGGAGIVVG-----FPRQDQEGVLNSVVILDAGNIIAVRDKI 115 ++ S I L+ + I+VG +++E N L+ G ++ Sbjct: 64 IAESGSYPTIKELEVFSKKNKC-IIVGSIIEKHSSKNRETYTNLGFCLEDGELVG----- 117 Query: 116 NLPNYSEFH----EKRTFISGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAE 169 Y++ H EK F SG +PI RD+ +G+ IC ++ + I + L GA+ Sbjct: 118 ---TYTKTHPFGKEKEYFTSGDVIEPIHLKERDLTVGLQICYEM-RFPEIARKLCLSGAD 173 Query: 170 FLFSLNASP 178 L ++ P Sbjct: 174 ILMTIAEFP 182 >gi|21227331|ref|NP_633253.1| Nitrilase [Methanosarcina mazei Go1] gi|20905686|gb|AAM30925.1| Nitrilase [Methanosarcina mazei Go1] Length = 307 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 24/219 (10%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGG 81 N+ A EEA + +L++F E+F +G+ E + + I+ L + + G Sbjct: 56 NLDHALSLAEEAVSKEAELLVFPEVFSTGFCYERIEEVAETVSG--PTIEALSDFSREYG 113 Query: 82 ---AGIVVGFPRQDQEGVL----------NSVVILDAGNIIAVRDKINLPNYSEFHEKRT 128 AG ++ +G + N +++G + +R K+ L EK+ Sbjct: 114 CILAGSMIEKREIKDKGAISPEKRAPYQYNLGFCIESGKLAGIRRKVQLYG----PEKKY 169 Query: 129 FISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 F SG S PI + + LG+++C ++ + + + + GA+ L S P ++ + Sbjct: 170 FASGDSIAPIRLQKYSLSLGLIVCNEL-RYPEVARKMTLDGADLLVSAAEIPDFY--IYP 226 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + + LP I N+VG + G+SF DG Sbjct: 227 WRIMSISRAIENQLPHIACNRVGKDRYSTYPGSSFITDG 265 >gi|319794041|ref|YP_004155681.1| aliphatic nitrilase [Variovorax paradoxus EPS] gi|315596504|gb|ADU37570.1| Aliphatic nitrilase [Variovorax paradoxus EPS] Length = 344 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 27/49 (55%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KL++A Q PV D+ G I K EA QG+ LI F E ++ GYP Sbjct: 8 KLRVAAVQAAPVFLDLDGTIDKTIDLMAEAAGQGVKLIAFPETWVPGYP 56 >gi|311087623|gb|ADP67702.1| NAD synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 268 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 40/242 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFH--KVIIGLSGGIDSALCAAIA---VDALGKENVQ 322 P+ E + CV L+ Y+ N+ H +I+G+SGG DS L A + + L KE Sbjct: 15 PVIIPEIEIKNCVDFLKKYLV-NHVHIKSLIVGVSGGQDSTLTAKLCQMTAETLRKEKND 73 Query: 323 TIMLPYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGI 377 + Y++ + P ++ D C A+ + P VN +++S + SG+ Sbjct: 74 ---ITYQFIALRLPYGIQYDEKDCQDAIRF---IQPDQIFNVNIKKAVLSSEKSLKKSGV 127 Query: 378 VAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 + N ++R R + +++ + +++ T + +E G+ T YGD NP+ L Sbjct: 128 IISDYVRGNEKARERMKVQYSIAAMKQGLVVGTGHAAENITGFFTKYGDSGTDINPIAKL 187 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESL-PPYPI 488 K Q+ L N P + K P A+L P Q D+ L Y + Sbjct: 188 NKRQIRLLLKNLNC--------------PKHLYLKKPMADLEDEHPQQDDESVLGVTYDV 233 Query: 489 LD 490 +D Sbjct: 234 ID 235 >gi|261393104|emb|CAX50701.1| conserved hypothetical protein [Neisseria meningitidis 8013] gi|325133665|gb|EGC56322.1| exsB protein [Neisseria meningitidis M13399] gi|325143847|gb|EGC66162.1| exsB protein [Neisseria meningitidis M01-240013] gi|325206623|gb|ADZ02076.1| exsB protein [Neisseria meningitidis M04-240196] Length = 219 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 13/94 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A+ A+ LG K V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERASWIAQDLGVKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI-VAEN 381 L + SLM Q L ++ + I AEN Sbjct: 64 LDL--------SLMRQITHNALMDDTAAIETAEN 89 >gi|91070142|gb|ABE11064.1| putative nitrilase [uncultured Prochlorococcus marinus clone HF10-11A3] Length = 275 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 14/166 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N +A E A R+G +LI E F G E L + C++ + T+ Sbjct: 16 NVESNFIEAEEQIELAARRGAELIGLPENFAFLGGDDEKLRLASELSEKCANFLKTMSQR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P D N S + G I+A DKI +LP+ + + E T + Sbjct: 76 YQVFLLGGGYPVPAGDDSHTFNRSALFGKDGQILAKYDKIHLFDVDLPDGNLYKESSTIL 135 Query: 131 SGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG P+V D+ ++G+ IC D+ + + ++L GAE + Sbjct: 136 SGAEYPPVV--DVPGLCKIGLSICYDV-RFPELYRYLSSNGAELIM 178 >gi|304388253|ref|ZP_07370373.1| transcription regulator ExsB [Neisseria meningitidis ATCC 13091] gi|304337780|gb|EFM03929.1| transcription regulator ExsB [Neisseria meningitidis ATCC 13091] gi|325141743|gb|EGC64196.1| exsB protein [Neisseria meningitidis 961-5945] gi|325197737|gb|ADY93193.1| exsB protein [Neisseria meningitidis G2136] Length = 219 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 13/94 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGVKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI-VAEN 381 L + SLM Q L ++ + I AEN Sbjct: 64 LDL--------SLMRQITHNALMDDTAAIETAEN 89 >gi|254245691|ref|ZP_04939012.1| NANitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia PC184] gi|124870467|gb|EAY62183.1| NANitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia PC184] Length = 273 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 22/264 (8%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFKKSF 62 KLK+ I QL GD N+ + A A G D+++F E ++G+ P +L Sbjct: 2 KLKLDIVQLAGRDGDTRYNLQRTLDA-IAACAPGTDIVMFPEAQLTGFLDPSNLADLAEP 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + S + D IVVG D N+ V + I K +L Sbjct: 61 LDGPSVGAVIAAARARD--VAIVVGLIENDGGRFYNTTVFVTPDGIALRYRKTHL----W 114 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL--NASPYY 180 E+ G + +R +R+G+LIC D + + L GA+ + N PY Sbjct: 115 VSERDVVQPGDRYATVEWRGVRIGLLICYD-SEFPESGRALAALGAQLILVADGNMEPY- 172 Query: 181 HNKLKKRHEI-VTGQISHVHLPIIYVNQVG-GQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + H V+ + + N+VG G ++++F G S D L F+ + E Sbjct: 173 ----RNVHRTSVSARAMENQVFAAVANRVGVGSEDVVFAGGSLAVDPFGSLIFEAGN-GE 227 Query: 239 QNFMTEWHYDQQLSQ---WNYMSD 259 E +D+ + ++Y +D Sbjct: 228 SRHTVELDFDRLAASRAVYDYRAD 251 >gi|53722504|ref|YP_111489.1| NAD synthetase [Burkholderia pseudomallei K96243] gi|76819159|ref|YP_335674.1| NAD synthetase [Burkholderia pseudomallei 1710b] gi|126456858|ref|YP_001076039.1| NAD synthetase [Burkholderia pseudomallei 1106a] gi|134282123|ref|ZP_01768829.1| NAD+ synthetase [Burkholderia pseudomallei 305] gi|167743114|ref|ZP_02415888.1| NAD synthetase [Burkholderia pseudomallei 14] gi|167820282|ref|ZP_02451962.1| NAD synthetase [Burkholderia pseudomallei 91] gi|167828655|ref|ZP_02460126.1| NAD synthetase [Burkholderia pseudomallei 9] gi|167850115|ref|ZP_02475623.1| NAD synthetase [Burkholderia pseudomallei B7210] gi|167898724|ref|ZP_02486125.1| NAD synthetase [Burkholderia pseudomallei 7894] gi|167915411|ref|ZP_02502502.1| NAD synthetase [Burkholderia pseudomallei 112] gi|217425105|ref|ZP_03456600.1| NH(3)-dependent NAD(+) synthetase [Burkholderia pseudomallei 576] gi|242314081|ref|ZP_04813098.1| NH(3)-dependent NAD(+) synthetase [Burkholderia pseudomallei 1106b] gi|254185232|ref|ZP_04891821.1| NAD+ synthetase [Burkholderia pseudomallei 1655] gi|254186797|ref|ZP_04893313.1| NAD+ synthetase [Burkholderia pseudomallei Pasteur 52237] gi|254193903|ref|ZP_04900335.1| NAD+ synthetase [Burkholderia pseudomallei S13] gi|254263586|ref|ZP_04954451.1| NH(3)-dependent NAD(+) synthetase [Burkholderia pseudomallei 1710a] gi|254301520|ref|ZP_04968964.1| NAD+ synthetase [Burkholderia pseudomallei 406e] gi|81606479|sp|Q63K83|NADE_BURPS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|123597253|sp|Q3JL79|NADE_BURP1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|229485727|sp|A3P6S9|NADE_BURP0 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|52212918|emb|CAH38955.1| putative NH(3)-dependent NAD(+) synthetase [Burkholderia pseudomallei K96243] gi|76583632|gb|ABA53106.1| NAD+ synthetase [Burkholderia pseudomallei 1710b] gi|126230626|gb|ABN94039.1| NH(3)-dependent NAD(+) synthetase [Burkholderia pseudomallei 1106a] gi|134246652|gb|EBA46740.1| NAD+ synthetase [Burkholderia pseudomallei 305] gi|157811323|gb|EDO88493.1| NAD+ synthetase [Burkholderia pseudomallei 406e] gi|157934481|gb|EDO90151.1| NAD+ synthetase [Burkholderia pseudomallei Pasteur 52237] gi|169650654|gb|EDS83347.1| NAD+ synthetase [Burkholderia pseudomallei S13] gi|184215824|gb|EDU12805.1| NAD+ synthetase [Burkholderia pseudomallei 1655] gi|217391710|gb|EEC31737.1| NH(3)-dependent NAD(+) synthetase [Burkholderia pseudomallei 576] gi|242137320|gb|EES23723.1| NH(3)-dependent NAD(+) synthetase [Burkholderia pseudomallei 1106b] gi|254214588|gb|EET03973.1| NH(3)-dependent NAD(+) synthetase [Burkholderia pseudomallei 1710a] Length = 284 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ ++G+SGGIDS+ A +AV+ L + LPY + Sbjct: 38 DYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG-----AQH 92 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGN 389 D A +AL DV P D + + + V NI++R R Sbjct: 93 DEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMI 152 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ +++ T + +E +G+ T +GD PL L K +V LA + Sbjct: 153 AQYAVAGARNGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRALARMLGAD-- 210 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 PL P + LE LRP + D+ + Y +DD ++ Sbjct: 211 ----EPLVLKTPTADLET-----LRPQRPDEHAYGITYEQIDDFLE 247 >gi|323360069|ref|YP_004226465.1| amidohydrolase [Microbacterium testaceum StLB037] gi|323276440|dbj|BAJ76585.1| predicted amidohydrolase [Microbacterium testaceum StLB037] Length = 271 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 10/150 (6%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +IA Q+ V GD+ N+A+ ++A G DL+LF E ++GY ++ F Sbjct: 4 RIATVQMEAVPGDVDANVARIAHLVDDAAAGGADLVLFPEAAVTGY--DERAFAGPLPPF 61 Query: 66 CSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYSE 122 + T D D G VV Q +EG L+ V++ + DK +L + Sbjct: 62 TAGGWWTRVQDAVDRTGVTAVVNTAFQ-REGCRTLSDVILAPGREPLVAYDKQHLHD--- 117 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICED 152 E+ F G V +R + +C D Sbjct: 118 -SERSLFTPGDHGASFVLNGLRFALSVCYD 146 >gi|318042099|ref|ZP_07974055.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. CB0101] Length = 394 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAAACAKALGCKY 350 H+V +GLSGG+DS+L AA+ V+A + T+ L + L DAA + LG ++ Sbjct: 35 HRVAVGLSGGVDSSLTAALLVEAGWQVEGLTLWLMSGKGACCAEGLVDAAGICEQLGVEH 94 Query: 351 DVLPIHDLVNHFFSLMSQFL 370 V+ D HF + FL Sbjct: 95 HVV---DFREHFKEQIVDFL 111 >gi|258646635|ref|ZP_05734104.1| ExsB protein [Dialister invisus DSM 15470] gi|260404056|gb|EEW97603.1| ExsB protein [Dialister invisus DSM 15470] Length = 233 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 30/50 (60%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 K II SGG+DS C ++AV+ALG ENV T + Y + L+ A A A Sbjct: 3 KAIILSSGGVDSTTCLSVAVNALGAENVSTASIFYGQKHKKELDAARAVA 52 >gi|217077866|ref|YP_002335584.1| NAD synthase family [Thermosipho africanus TCF52B] gi|217037721|gb|ACJ76243.1| NAD synthase family [Thermosipho africanus TCF52B] Length = 342 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY-KYTSPQSLEDAAA 341 +++Y KN V+I SGG+DS + A + +ALG ENV+ + Y +T +S+E Sbjct: 18 VKEYGNKN----VVIAFSGGLDSTVAALLTKEALGPENVELANVVYGPFTYKRSIEIVKK 73 Query: 342 CAKALGCKYDVL 353 A+ +G K L Sbjct: 74 SAEKIGLKITFL 85 >gi|295133251|ref|YP_003583927.1| carbon-nitrogen hydrolase family protein [Zunongwangia profunda SM-A87] gi|294981266|gb|ADF51731.1| carbon-nitrogen hydrolase family protein [Zunongwangia profunda SM-A87] Length = 232 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 21/226 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP---EDLVFKKS 61 +KIA+AQL G+I NI K ++A D I+F EL ++ Y P +L FK++ Sbjct: 1 MKIALAQLQSESGNIKANIKKHLDYIDKAAAAKADFIVFPELSLTNYEPHLARELAFKQN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIA--VRDKINLPN 119 S + K + I +G P + + ++ I + I + ++ Sbjct: 61 -----DSKLTIFKDYSTKYKLAIGLGLPLKLNNKIHIAMAIFKPKSDIQFYFKQYLHEDE 115 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + FH K+ S+ I F+ ++ + IC +I + +HL+ E + AS Sbjct: 116 HPFFHPKK------SDSIIQFQKKKIKLAICYEI----TVEEHLQDIILEKVDFYVASVA 165 Query: 180 YHNKLKKRHEIVTGQIS-HVHLPIIYVNQVGGQDELIFDGASFCFD 224 H K + E IS + +P++ VN G DE+ G SF ++ Sbjct: 166 KHKKGMEDAEHRLRFISDNYKIPVLLVNNTGKADEMNCCGNSFAYN 211 >gi|237508249|ref|ZP_04520964.1| NAD+ synthetase [Burkholderia pseudomallei MSHR346] gi|235000454|gb|EEP49878.1| NAD+ synthetase [Burkholderia pseudomallei MSHR346] Length = 284 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ ++G+SGGIDS+ A +AV+ L + LPY + Sbjct: 38 DYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG-----AQH 92 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGN 389 D A +AL DV P D + + + V NI++R R Sbjct: 93 DEADARRALAFVRADKTLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMI 152 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ +++ T + +E +G+ T +GD PL L K +V LA + Sbjct: 153 AQYAVAGARNGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRALARMLGAD-- 210 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 PL P + LE LRP + D+ + Y +DD ++ Sbjct: 211 ----EPLVLKTPTADLET-----LRPQRPDEHAYGITYEQIDDFLE 247 >gi|33866156|ref|NP_897715.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. WH 8102] gi|81572928|sp|Q7TTU4|MNMA_SYNPX RecName: Full=tRNA-specific 2-thiouridylase mnmA gi|33639131|emb|CAE08137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. WH 8102] Length = 396 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 9/103 (8%) Query: 257 MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 MS ++ST +P A +A + LR + + H+V +GLSGG+DS+L AA+ V+A Sbjct: 1 MSSATSSTDRLPT----AAGDAALQRLRTWPGE---HRVAVGLSGGVDSSLTAALLVEAG 53 Query: 317 GKENVQTIML--PYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 + T+ L + L DAA + LG + V+ D Sbjct: 54 WEVEGLTLWLMSGKGACCAEGLVDAAGICEQLGIPHHVVDTRD 96 >gi|56609599|gb|AAW03332.1| CtaJ [Cystobacter fuscus] Length = 343 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 33/228 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A QL G + N+ AR + A QG L+L E + +GY V++ Sbjct: 12 LRVAALQLRSENGRVQHNLEHARPFIQSAAEQGAQLLLLPEFYPTGYLQSPEVWRAGETL 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSEF 123 + LK + F D + N+ V++ AG + VR K P+Y + Sbjct: 72 D-GPTVRFLKQQAAQWRVHLGTSFLEADGDDFYNAFVLVSPAGQVHKVR-KRRAPSYEAY 129 Query: 124 HEKRTFISGYSNDPIVFRDIRLG---ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + G +DP V D LG + IC D ++I +++ A+ L+ P+ Sbjct: 130 -----WFRGSGDDPCVI-DCELGRFSVGICADN-HFADIAGCIERHRAQ----LHLMPHC 178 Query: 181 HNKLKKRHEIVTGQI----------------SHVHLPIIYVNQVGGQD 212 + + + ++ SH LP++ NQ G D Sbjct: 179 YCVPRANPKTFPAEVIEASRRQMEMLPVRYASHFGLPVVLANQCGPWD 226 >gi|76800744|ref|YP_325752.1| amidase (aliphatic amidase) 2 [Natronomonas pharaonis DSM 2160] gi|76556609|emb|CAI48180.1| probable amidase (aliphatic amidase) 2 [Natronomonas pharaonis DSM 2160] Length = 367 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 16/136 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------- 52 + +A AQ+ PV D A + K R E A G DL++F E + GYP Sbjct: 4 ESFTLAAAQIEPVYHDKAATLDKTCRYIERAGNAGADLVVFPETYFPGYPYWRGSVSIPR 63 Query: 53 -PEDLV-FKKSFIQACSSAIDTLKSDTHDGGAGIVVGF-PRQDQEG---VLNSVVILDAG 106 E +V +K+ + A+D L D + +G R D+ G + NS+ Sbjct: 64 WTELMVDLQKNSLHVDDEAVDVLAEAAADANVHVALGTNERSDRPGSETLYNSIFYFSRD 123 Query: 107 NIIAVRDKINLPNYSE 122 + R + +P E Sbjct: 124 GDLLGRHRKLMPTQEE 139 >gi|315641346|ref|ZP_07896422.1| NH(3)-dependent NAD(+) synthetase [Enterococcus italicus DSM 15952] gi|315482919|gb|EFU73439.1| NH(3)-dependent NAD(+) synthetase [Enterococcus italicus DSM 15952] Length = 274 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 42/232 (18%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDAL-------GKENVQ--TIMLPYKYTS 332 L+ Y+ K F + ++G+SGG DS+L + A+ G N Q + LPY + Sbjct: 30 LKSYMGKFPFLQTYVLGISGGQDSSLAGRLTQLAMEELRNETGNPNYQFVAVRLPYGEQA 89 Query: 333 PQSLEDAAACAKALG-CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV-----AENIQSRI 386 D A KAL K DV VN ++ +Q E SGI N+++R Sbjct: 90 -----DEADAQKALTFIKPDVAL---RVNIKKAVDAQVAAIEESGIGIGDFNKGNMKARQ 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R A+++ K ++ T + +E G+ T +GD P+ L K Q QL Sbjct: 142 RMITQYAIASEKKGAVIGTDHAAENITGFFTKFGDGGADILPIFRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P I K P+A+L RP D+ +L Y +DD ++ Sbjct: 196 ---LQALGA-----PAEIYNKVPTADLEDGRPLIADEVALGVTYDDIDDYLE 239 >gi|297182867|gb|ADI19018.1| predicted amidohydrolase [uncultured alpha proteobacterium HF0070_05I22] Length = 277 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 17/117 (14%) Query: 90 RQDQEGVLNSVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFISGYSNDPIV--FRD 142 RQD + V ++ G IIA DKI N+ + ++ E +F++G + P++ D Sbjct: 90 RQDHKLVNRGILFAPDGQIIASYDKIHMFDANVGDGQQYCESNSFVAGTA--PVIADLGD 147 Query: 143 IRLGILICEDIWKNSNICKHLKKQGAEFL------FSLNASPYYHNKLKKRHEIVTG 193 I+LG+ IC D+ + + + + L + GA L +++ + ++H L+ R I TG Sbjct: 148 IQLGMSICYDL-RFAYLYRQLARDGAHILTVPAAFTAVSGAAHWHVLLRAR-AIETG 202 >gi|260597617|ref|YP_003210188.1| NAD synthetase [Cronobacter turicensis z3032] gi|260216794|emb|CBA30256.1| NH(3)-dependent NAD(+) synthetase [Cronobacter turicensis z3032] Length = 275 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 29/212 (13%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++ F K +++G+SGG DS L ++ A+ + +T Y++ + P ++ Sbjct: 30 LKAYLKTYPFLKTLVLGISGGQDSTLAGKLSQLAISELRDETGDQSYQFIAVRLPFGVQF 89 Query: 338 DAAACAKALGC--KYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRGNILM 392 D C AL VL ++ + + L+E E S V N ++R R Sbjct: 90 DEKDCQDALAFIQPDKVLTVN--IKEAVLASEKALREAGIELSDFVRGNEKARERMKAQY 147 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 +++ +K +++ T + +E G+ T YGD NPL L K R + Sbjct: 148 SIAGMTKGVVVGTDHAAEAVTGFYTKYGDGGTDINPLFRLNK---------RQGKMLLKT 198 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 LG P + K P+A+L + D+ SLP Sbjct: 199 LG-----CPEHLYLKVPTADL---EDDRPSLP 222 >gi|313235384|emb|CBY10899.1| unnamed protein product [Oikopleura dioica] Length = 636 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 18/148 (12%) Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 C+ +R+ V + K+++ +SGG+DS + AA+ A+GKE V+ + + + L + Sbjct: 192 CIAEIREQVGETG--KILVLISGGVDSCVLAALCFKAIGKERVKCLHIDNGFMRKVELVN 249 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI----QSRIRGNILMAL 394 A C+ + L +EPS I+ + + + +I G+ + L Sbjct: 250 AQRMFYNSSCQ------------IYGSKPDDLLQEPSQILCKTVDPEQKRKIIGDTFIKL 297 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + L + + ++ + GTL D+ Sbjct: 298 VKIEASRLNMSIDNKDVFLAQGTLRPDL 325 >gi|148975600|ref|ZP_01812471.1| carbon-nitrogen hydrolase family protein [Vibrionales bacterium SWAT-3] gi|145965028|gb|EDK30279.1| carbon-nitrogen hydrolase family protein [Vibrionales bacterium SWAT-3] Length = 263 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 6/118 (5%) Query: 39 DLILFTELFISGYPPEDL--VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV 96 D+ L ELF +GY + V + S A S ID+L IV G +DQ Sbjct: 37 DITLLPELFSTGYIFNQVSEVHELSENFANSETIDSLSQLAAKHETLIVAGIAEEDQGEY 96 Query: 97 LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 NSV ++D +R K + ++F +K+ F G ++ + G+ IC DIW Sbjct: 97 YNSVAVIDG---TGLRHKYRKVSQTKF-DKQYFSRGSELLTFEYKGLTFGVAICFDIW 150 >gi|332711800|ref|ZP_08431731.1| conserved hypothetical protein TIGR00268 [Lyngbya majuscula 3L] gi|332349778|gb|EGJ29387.1| conserved hypothetical protein TIGR00268 [Lyngbya majuscula 3L] Length = 275 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 + +I SGG+DS L A IA D L + V + P+ LEDA A +G + Sbjct: 15 EMERALIAYSGGVDSTLVAKIAYDVLS-DRVIAVTAESPSLLPEELEDARIQAATIGITH 73 Query: 351 DVLPIHDLVNHFFS 364 +V+ H++ N ++ Sbjct: 74 EVVQTHEMDNPNYT 87 >gi|302390274|ref|YP_003826095.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosediminibacter oceani DSM 16646] gi|302200902|gb|ADL08472.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Thermosediminibacter oceani DSM 16646] Length = 268 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 21/240 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGM--DLILFTELFISGYPPEDLVFKKSF 62 LK+++ Q++ GD N K EA + + D+I+ E++ +GY E L + Sbjct: 2 LKVSLIQMDLAHGDPVENRRKLEGLLREALKPKVKPDVIVLPEMWNTGYALERL--SEIA 59 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGF--------PRQDQEGVLNSVVILDAGNIIAVRDK 114 + I+ LK + G IV G P ++ + VI +G ++A DK Sbjct: 60 DRDGRPTIEWLKKVAAENGINIVAGSIADIRSESPAEEPRVYNTAYVINRSGEVVARYDK 119 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 ++ + E++ G + G+ IC DI + + + GA LF Sbjct: 120 VH--RFRLMGEEKYVAPGERAVTFDLDGVTCGLAICYDI-RFPEFIRKIALLGARILFV- 175 Query: 175 NASPYYHNKLKKRHEIVTGQISHV--HLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 P K ++ H + + + ++ VN+VG Q + +F G S + ++ + Sbjct: 176 ---PAQWPKPRQMHWKLLNMVRAIENQFYVVGVNRVGSQGKAVFPGISLVVNPWGEVLLE 232 >gi|149177858|ref|ZP_01856457.1| predicted amidohydrolase [Planctomyces maris DSM 8797] gi|148843348|gb|EDL57712.1| predicted amidohydrolase [Planctomyces maris DSM 8797] Length = 282 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 1/115 (0%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA Q++ + D GN+++ +E G L +F E ++GY L + + Sbjct: 1 MKIAGVQMDISLMDKEGNLSRIIEKIKETAAAGASLTVFPECALTGYCFASLEEALPYAE 60 Query: 65 ACSS-AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 + + D L+ + +VVG Q ++GV N+ V++ ++ KI+LP Sbjct: 61 SIPGPSTDRLQEICRELNHSVVVGMLEQAEQGVYNAAVLITPEGVLGSYRKIHLP 115 >gi|332662371|ref|YP_004445159.1| asparagine synthase [Haliscomenobacter hydrossis DSM 1100] gi|332331185|gb|AEE48286.1| asparagine synthase (glutamine-hydrolyzing) [Haliscomenobacter hydrossis DSM 1100] Length = 619 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 60/147 (40%), Gaps = 29/147 (19%) Query: 282 SLRDYVQKNNFHKVIIG--LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 +LRD VQ + V G LSGGIDS+L + + L V+T + +K L A Sbjct: 245 TLRDSVQAHLLADVPFGAFLSGGIDSSLVVSYMAEHLSSP-VKTFSIGFKEEKYNELAYA 303 Query: 340 AACAKALGCKY----------DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 A AK G ++ D+LP DLV H+ + + S I + R N Sbjct: 304 AEVAKKWGTEHHVEIVEPQGLDILP--DLVRHYGEPFA-----DSSAIPTWYVSRLARRN 356 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYG 416 + M LT E+ GYG Sbjct: 357 V---------TMTLTGDGGDELFAGYG 374 >gi|119511902|ref|ZP_01631001.1| hypothetical protein N9414_02154 [Nodularia spumigena CCY9414] gi|119463470|gb|EAW44408.1| hypothetical protein N9414_02154 [Nodularia spumigena CCY9414] Length = 275 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 + +I SGGIDS L A IA D LG + + P+ LEDA A +G + Sbjct: 16 MEQALIAYSGGIDSTLVAKIAYDVLGDRALAVTAVSPSLL-PEELEDAKIQAATMGIPHK 74 Query: 352 VLPIHDLVNHFFS 364 ++ H++ N ++ Sbjct: 75 IVQTHEMDNPNYT 87 >gi|148656858|ref|YP_001277063.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Roseiflexus sp. RS-1] gi|148568968|gb|ABQ91113.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Roseiflexus sp. RS-1] Length = 294 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 12/173 (6%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSFIQA---CSSAIDTLKSD 76 N A A EA ++G ++ ELF S Y ED + F A + + L + Sbjct: 21 NFAVAVEGIREAAKRGAQIVCLPELFRSLYFCQSED---HRHFALAEPIPGPSTEALGAL 77 Query: 77 THDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG-Y 133 + G I+ + EG+ N+ +LDA G + K+++P+ ++EK F G Sbjct: 78 ARELGVVIIASLFEKRAEGLYHNTAAVLDADGRYLGKYRKMHIPDDPLYYEKFYFTPGDL 137 Query: 134 SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 R R+G+LIC D W + +GA+ LF A ++ + +K Sbjct: 138 GFKVFATRYARVGVLICWDQW-YPEAARLTALRGADILFYPTAIGWHPAEKEK 189 >gi|53717390|ref|YP_105480.1| NAD synthetase [Burkholderia mallei ATCC 23344] gi|67640095|ref|ZP_00438915.1| NH(3)-dependent NAD(+) synthetase [Burkholderia mallei GB8 horse 4] gi|121598037|ref|YP_990196.1| NAD synthetase [Burkholderia mallei SAVP1] gi|124382306|ref|YP_001024513.1| NAD synthetase [Burkholderia mallei NCTC 10229] gi|126446643|ref|YP_001078836.1| NAD synthetase [Burkholderia mallei NCTC 10247] gi|254174362|ref|ZP_04881024.1| NH3-dependent NAD+ synthetase [Burkholderia mallei ATCC 10399] gi|254209173|ref|ZP_04915520.1| NH3-dependent NAD+ synthetase [Burkholderia mallei JHU] gi|254355544|ref|ZP_04971824.1| NH3-dependent NAD+ synthetase [Burkholderia mallei 2002721280] gi|81684344|sp|Q62CU8|NADE_BURMA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|229485726|sp|A3MF00|NADE_BURM7 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238685483|sp|A1UW43|NADE_BURMS RecName: Full=NH(3)-dependent NAD(+) synthetase gi|238685486|sp|A2RXU4|NADE_BURM9 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|52423360|gb|AAU46930.1| NH3-dependent NAD+ synthetase [Burkholderia mallei ATCC 23344] gi|121225835|gb|ABM49366.1| NH3-dependent NAD+ synthetase [Burkholderia mallei SAVP1] gi|124290326|gb|ABM99595.1| NH(3)-dependent NAD(+) synthetase [Burkholderia mallei NCTC 10229] gi|126239497|gb|ABO02609.1| NH(3)-dependent NAD(+) synthetase [Burkholderia mallei NCTC 10247] gi|147750396|gb|EDK57466.1| NH3-dependent NAD+ synthetase [Burkholderia mallei JHU] gi|148023637|gb|EDK82699.1| NH3-dependent NAD+ synthetase [Burkholderia mallei 2002721280] gi|160695408|gb|EDP85378.1| NH3-dependent NAD+ synthetase [Burkholderia mallei ATCC 10399] gi|238520750|gb|EEP84207.1| NH(3)-dependent NAD(+) synthetase [Burkholderia mallei GB8 horse 4] Length = 284 Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ ++G+SGGIDS+ A +AV+ L + LPY + Sbjct: 38 DYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG-----AQH 92 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGN 389 D A +AL DV P D + + + V NI++R R Sbjct: 93 DEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMI 152 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ +++ T + +E +G+ T +GD PL L K +V LA + Sbjct: 153 AQYAVAGARNGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRALARMLGAD-- 210 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 PL P + LE LRP + D+ + Y +DD ++ Sbjct: 211 ----EPLVLKTPTADLET-----LRPQRPDEHAYGITYEQIDDFLE 247 >gi|330509075|ref|YP_004385503.1| peptidyl-arginine deiminase/hydrolase fusion protein [Methanosaeta concilii GP-6] gi|328929883|gb|AEB69685.1| porphyromonas-type peptidyl-arginine deiminase/hydrolase fusion protein [Methanosaeta concilii GP-6] Length = 663 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 16/216 (7%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPE----DLVFKKSFIQACSSAIDTLKSDT 77 N+ KA +EA ++G ++ EL+ + Y P+ D I S+ ++ + Sbjct: 26 NLKKAIGMIKEAAKKGAKIVCLPELYRTRYFPQWDQKDASHLAETIPGESTDAFSILARE 85 Query: 78 HDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSND 136 H+ I+V + + NS ++D G+++ KI++P+ F+E+ F G Sbjct: 86 HE--IVIIVPIYEKTEGDYFNSAAVIDNDGSLLETYRKIHIPHDPLFYEQSYFSPGDEIR 143 Query: 137 PIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--------SPYYHNKLKKRH 188 R R + IC D W + GA+ +F A P + Sbjct: 144 IYDTRYARFAVFICYDQW-FPEAARVAALGGAQIIFYPTAIGNIMDQGEPAEGDWHDAWE 202 Query: 189 EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + G + + VN+VG ++ L F G+SF D Sbjct: 203 TVQRGHAISNSICVAAVNRVGREESLSFWGSSFVSD 238 >gi|322375559|ref|ZP_08050071.1| NAD+ synthetase [Streptococcus sp. C300] gi|321279267|gb|EFX56308.1| NAD+ synthetase [Streptococcus sp. C300] Length = 274 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 42/276 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + + + + L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGI 377 + LPY + D A KAL + + + M+ ++ S + Sbjct: 75 SYQFIAVRLPYGVQA-----DEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPV 129 Query: 378 V---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 NI++R R AL+ ++ T + +E G+ T +GD PL L K Sbjct: 130 SDFNKGNIKARSRMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNK 189 Query: 435 TQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAELRPHQTDQESLPPYPILDDII 493 Q QL L E+ P + EK P+A+L +E P + D+I Sbjct: 190 RQGKQL---------------LKELGADPVLYEKIPTADL------EEDKP--GLADEIA 226 Query: 494 KRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 + NE + + E +E+ Y ++KR Sbjct: 227 LGVTYNEIDDYLEGKIISPEAQATIENWWYKGQHKR 262 >gi|283780639|ref|YP_003371394.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Pirellula staleyi DSM 6068] gi|283439092|gb|ADB17534.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Pirellula staleyi DSM 6068] Length = 333 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDL 56 +K +++A Q++ GDI+ N+A R EA +I F E + GY + Sbjct: 1 MKSVRVAAVQMHHEPGDISTNLATIERVAREAAEAQAKIIAFPECCLQGYWHLRNLSREE 60 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDAGNIIAVRDKI 115 +F + ++++ + + A I VG +D +G L NS + AV K+ Sbjct: 61 LFSLAEPLPTGDHAASIRALSEELQATIGVGLIERDDQGRLFNSYFVAMPSGQFAVHRKL 120 Query: 116 NLPNYSEFHEKRTFISGY---SNDPIVF---RDIRLGILICED--IWKNSNICKHLKKQG 167 ++ F+S + +D VF R+G+LIC D + +N+ C L+ G Sbjct: 121 HV-----------FVSPFLTPGDDYTVFDTPHGCRVGVLICYDNNLVENAR-CTALR--G 166 Query: 168 AEFLFS 173 AE L S Sbjct: 167 AEILLS 172 >gi|260790337|ref|XP_002590199.1| hypothetical protein BRAFLDRAFT_283497 [Branchiostoma floridae] gi|229275389|gb|EEN46210.1| hypothetical protein BRAFLDRAFT_283497 [Branchiostoma floridae] Length = 688 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 3/45 (6%) Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 C+ +R+ V K HKV++ +SGG+DSA+CAA+ AL K+ V Sbjct: 219 TGCIQEIREIVGK---HKVLVLVSGGVDSAVCAALLHKALDKDQV 260 >gi|118579658|ref|YP_900908.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pelobacter propionicus DSM 2379] gi|118502368|gb|ABK98850.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pelobacter propionicus DSM 2379] Length = 286 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 53/252 (21%), Positives = 95/252 (37%), Gaps = 19/252 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++++IA+ L+ G++ N A +A + D +L EL +GY + Sbjct: 30 ERIRIALLHLDARPGEVGRNRRSIENAIAQAVAEKADWVLTPELAETGYGFAARIGTGWI 89 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNY 120 I +L + G + +G +D + NSV ++D RD + Y Sbjct: 90 ESFPDQWIRSLAAGARHNGVALFIGIAERDSTTGNLHNSVAVID-------RDGVIQGTY 142 Query: 121 SEFH-----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS-L 174 + + G N+ I +G LIC D +K+ +H K+ GA L S Sbjct: 143 RKHRVVNGPAENWATKGIENNLFTVDGIPIGFLICADAYKDEISSRH-KQMGARILLSPA 201 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 N P K E + + LP+I N+ G + + F Q + F + Sbjct: 202 NWPPAGEMGPKGYWEERSRETG---LPLIVNNRTGVEPGIDFSAGESAAIAQGKRLFTLV 258 Query: 235 HFSEQNFMTEWH 246 + + +W+ Sbjct: 259 SPHPRLVLLDWN 270 >gi|169840107|ref|ZP_02873295.1| hypothetical protein cdivTM_23734 [candidate division TM7 single-cell isolate TM7a] Length = 69 Score = 41.6 bits (96), Expect = 0.38, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 27/34 (79%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 K ++G+SGG DS++ AA+ V ALG++NV +++P Sbjct: 13 KAVVGISGGTDSSVVAALCVAALGRKNVIGVLMP 46 >gi|86604790|ref|YP_473553.1| carbon-nitrogen family hydrolase [Synechococcus sp. JA-3-3Ab] gi|86553332|gb|ABC98290.1| hydrolase, carbon-nitrogen family [Synechococcus sp. JA-3-3Ab] Length = 275 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 18/178 (10%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDT 77 D+AGN+ +A + A R+G +L+ E F P E+ K + + + Sbjct: 16 DLAGNLQQAEEWIDFAARRGCELVTLPENFAFMGPEEE---KARLAPEIAQRAEEFLAKM 72 Query: 78 HDGGAGIVV--GFPRQDQEG-VLNSVVILDA-GNIIAVRDKI-----NLPNYSEFHEKRT 128 V+ G+P D +G V N+ + G +A KI NLP+ + + E T Sbjct: 73 AQRYQVFVLGGGYPVPDGQGKVYNTAALYSPEGKELARYRKIHLFDVNLPDGNTYRESNT 132 Query: 129 FISGYSNDPIVFRDIRLGIL---ICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 +SG N+ +V ++ RLG L +C D+ + + + L +GAE L A Y + Sbjct: 133 VVSG--NEVVVCQEERLGTLGLSVCYDV-RFPELYRSLVDRGAEVLLIPAAFTAYTGR 187 >gi|40890065|gb|AAR97377.1| nitrilase [uncultured organism] Length = 348 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 27/50 (54%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K+ ++A Q PV D+ G I+K EEA G LI F E +I GYP Sbjct: 5 KQFRVAAVQAAPVFLDLEGAISKGISLIEEAASNGAKLIAFPETWIPGYP 54 >gi|40890073|gb|AAR97381.1| nitrilase [uncultured organism] Length = 334 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 28/139 (20%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A Q++PV+ AG + K R E +G+ F E I YP SF+Q Sbjct: 4 IKAAAIQISPVLYSRAGTVEKVVRKVRELGAKGVRFATFPETIIPYYP------YFSFVQ 57 Query: 65 AC--------------------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD 104 + SS D + + G + VG +D + N+ ++ D Sbjct: 58 SAFDMKLGSEHQRLLDESVTIPSSETDAIAQAAKEAGMVVSVGVNERDGRSIYNTQLLFD 117 Query: 105 A-GNIIAVRDKINLPNYSE 122 A G +I R KI P Y E Sbjct: 118 ADGTLIQRRRKIT-PTYHE 135 >gi|266619661|ref|ZP_06112596.1| nitrilase family protein [Clostridium hathewayi DSM 13479] gi|288868758|gb|EFD01057.1| nitrilase family protein [Clostridium hathewayi DSM 13479] Length = 343 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 21/173 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-------PPE 54 L KL+ A Q PV + + K R +EA G DL++F E FI + PP Sbjct: 18 LPKLRAAAVQAAPVFLNRDATVQKVARLTKEAKDNGADLVVFPESFIPTFPLWCLFLPPV 77 Query: 55 DL--VFKKSFIQACS---SAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILD-A 105 D +K+ F A + A + L+ D + VG + + N+ ++ D Sbjct: 78 DQHPFYKRLFENAVTVPGPAFNELQKIARDNSIFLSVGICEKSTTNFGTMWNTTLLFDRE 137 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 GN+I K+ LP + E +F G S + R+G LIC + NSN Sbjct: 138 GNMIGHHRKL-LPTWGE-KLVWSFGDGSSLNIHDTEIGRIGALICGE---NSN 185 >gi|167923251|ref|ZP_02510342.1| NAD synthetase [Burkholderia pseudomallei BCC215] Length = 284 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ ++G+SGGIDS+ A +AV+ L + LPY + Sbjct: 38 DYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG-----AQH 92 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGN 389 D A +AL DV P D + + + V NI++R R Sbjct: 93 DEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMI 152 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ +++ T + +E +G+ T +GD PL L K +V LA + Sbjct: 153 AQYAVAGARNGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRALARMLGAD-- 210 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 PL P + LE LRP + D+ + Y +DD ++ Sbjct: 211 ----EPLVLKTPTADLET-----LRPQRPDEHAYGITYEQIDDFLE 247 >gi|218767647|ref|YP_002342159.1| hypothetical protein NMA0702 [Neisseria meningitidis Z2491] gi|81543061|sp|Q9JVT8|QUEC_NEIMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|121051655|emb|CAM07958.1| hypothetical protein NMA0702 [Neisseria meningitidis Z2491] gi|254674036|emb|CBA09820.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|319409903|emb|CBY90228.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594] Length = 219 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 13/94 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGVKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI-VAEN 381 L + SLM Q L ++ + I AEN Sbjct: 64 LDL--------SLMRQITHNALMDDTAAIETAEN 89 >gi|77408199|ref|ZP_00784944.1| NAD+ synthetase [Streptococcus agalactiae COH1] gi|77173214|gb|EAO76338.1| NAD+ synthetase [Streptococcus agalactiae COH1] Length = 273 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 37/258 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALC---AAIAVDAL---GKENVQTIMLPYKYTSPQS 335 L+DY+ K++F K ++G+SGG DS L A +AV+ L EN Q I + Y Sbjct: 30 LKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQAD 89 Query: 336 LEDAAACAKALG-CKYDV---LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 EDA KAL K D+ + I + V+ ++ E + NI++R R Sbjct: 90 EEDAQ---KALDFIKPDIALTINIKEAVDGQVRALNA-AGVEITDFNKGNIKARQRMISQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K+Q QL + Sbjct: 146 YAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQL---------LA 196 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 LG + EK P+A+L +E+ P I D+I + E + + Sbjct: 197 ELGA-----DKDLYEKIPTADL------EENKP--GIADEIALGVTYQEIDAYLEGKVVS 243 Query: 512 DETVRYVEHLLYGSEYKR 529 D++ +E+ Y ++KR Sbjct: 244 DKSRGIIENWWYKGQHKR 261 >gi|326693814|ref|ZP_08230819.1| NAD synthetase [Leuconostoc argentinum KCTC 3773] Length = 281 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 21/168 (12%) Query: 283 LRDYVQKN-NFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIML-----PYKYTSP 333 L++Y+ +N + +I +SGG DS L A +A L +E QT L PY Sbjct: 31 LKNYLLQNPQYTSYVIAVSGGQDSTLAGKLARLATQELTEETGQTYQLIAIRQPYG---- 86 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN-----IQSRIRG 388 Q L++ A A D + I + M+ L++ SG+V ++ I+ ++R Sbjct: 87 QQLDEPDALAALAFIDADRV-ITTNIKTATDAMTLALRD--SGLVVDDLSRGSIKPKMRM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 A++ + +++ T + +E G+ T YGD NPL L K Q Sbjct: 144 IAQYAVAREYQGVVIGTDHAAEAFAGFFTKYGDGGTDINPLWRLNKRQ 191 >gi|270291225|ref|ZP_06197448.1| NAD+ synthetase [Pediococcus acidilactici 7_4] gi|270280621|gb|EFA26456.1| NAD+ synthetase [Pediococcus acidilactici 7_4] Length = 272 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQK-NNFHKVIIGLSGGIDSALCAAIAVDAL-------GKE 319 P + E + V ++ Y++ + +++G+SGG DS L A+A A+ G + Sbjct: 16 PTIDPEKEIRRSVDFMKRYLKSVPSLRSLVLGISGGQDSTLAGALAQMAIRELREETGND 75 Query: 320 NVQ--TIMLPYKYTSPQSLEDAAACAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEE 373 + Q + LPY + +S DA + + + D+ P D + + + Sbjct: 76 DYQFIAVRLPYGVQADES--DAMKAIEFMQADRVVRIDIKPAADAMVAAIEATGVQVSDF 133 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 G NI++R R ++ + +++ T + +E G+ T +GD PL L Sbjct: 134 NKG----NIKARQRMIAQYGIAGETAGIVVGTDHAAESVTGFYTKFGDGGADIVPLWRLN 189 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q + N+ P + EK P+A+L RP D+ +L Y + Sbjct: 190 KRQGKAMLKALNA--------------PVELYEKVPTADLEDERPALPDEVALGVTYQDI 235 Query: 490 DDIIK 494 DD ++ Sbjct: 236 DDYLE 240 >gi|167907062|ref|ZP_02494267.1| NAD synthetase [Burkholderia pseudomallei NCTC 13177] Length = 284 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 32/226 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ-------TIMLPYKYTSPQSLE 337 DY++ ++G+SGGIDS+ +A A+ + + LPY + Sbjct: 38 DYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGDDARFVAMRLPYG-----AQH 92 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGN 389 D A +AL DV P D + + + V NI++R R Sbjct: 93 DEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMI 152 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ +++ T + +E +G+ T +GD PL L K +V LA + Sbjct: 153 AQYAVAGARNGVVIGTDHAAESVMGFFTKFGDGGADMLPLAGLTKRRVRALARMLGAD-- 210 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 PL P + LE LRP + D+ + Y +DD ++ Sbjct: 211 ----EPLVLKTPTADLET-----LRPQRPDEHAYGITYEQIDDFLE 247 >gi|218438056|ref|YP_002376385.1| ExsB family protein [Cyanothece sp. PCC 7424] gi|218170784|gb|ACK69517.1| ExsB family protein [Cyanothece sp. PCC 7424] Length = 272 Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + +I SGG+DS L A IA D LG + + P+ LEDA A +G Sbjct: 14 KQMDRALIAYSGGVDSTLVAKIAYDILGDRALAVTAVSPSLL-PEELEDAKIQAATIGIT 72 Query: 350 YDVLPIHDLVNHFFS 364 ++++ H++ N ++ Sbjct: 73 HELIQTHEMDNPNYT 87 >gi|298487423|ref|ZP_07005469.1| hydrolase, carbon-nitrogen family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158042|gb|EFH99116.1| hydrolase, carbon-nitrogen family [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 246 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 17/229 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ GDI N+A + A G +LF EL ++GY P+ + + + A Sbjct: 6 LAVAQFCSARGDIEQNLAGHLAFMQRAADLGASYLLFPELSLTGYEPD--LARALALHAD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN-YSEFHE 125 + ++ +K+ +G P + N +++ A A D Y E Sbjct: 64 DARLEPIKALAMKLRLVTTIGVPLKGA----NDSILIGALTFTADGDVTTYAKQYLHPGE 119 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 + F G + + R+G+ +C D + ++ + + S+ SP Sbjct: 120 DKVFSEGNKDCYLSIDQHRIGLCVCADFTQPEHVQRMAAGGAWVYAASVLISP---GGYA 176 Query: 186 KRHEIVTGQISHVHLPIIYVNQ---VGGQDEL----IFDGASFCFDGQQ 227 + E++ G +LP++ N GG + ++DGA G Q Sbjct: 177 QDAELLAGHARRHNLPVLVANHGAPTGGWESAGRSGLWDGAGRWIGGMQ 225 >gi|83717269|ref|YP_439083.1| NAD synthetase [Burkholderia thailandensis E264] gi|257142192|ref|ZP_05590454.1| NAD synthetase [Burkholderia thailandensis E264] gi|83651094|gb|ABC35158.1| NAD+ synthetase [Burkholderia thailandensis E264] Length = 284 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 38/229 (16%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ ++G+SG IDS+ A +AV+ L + LPY + Sbjct: 38 DYLRAAGLRTCVLGISGDIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG-----AQH 92 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMS-QFLQEEPSGIVAENIQSRIRGN 389 D A +AL DV P D + + +L V NI++R R Sbjct: 93 DEADAQRALAFVRADETLTVDVKPAADAMLAALATGGLAYLDHAHQDFVLGNIKARERMI 152 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ + +++ T + +E +G+ T +GD PL L K +V +LA + + Sbjct: 153 AQYAVAGARRGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRELARMLGADEL 212 Query: 450 TSGLGPLTEVIPPSILEKSPSAE---LRPHQTDQESLP-PYPILDDIIK 494 ++ K+P+A+ LRP D+++ Y +DD ++ Sbjct: 213 --------------LVMKTPTADLETLRPQLPDEQAYGITYEQIDDFLE 247 >gi|322821894|gb|EFZ28095.1| NAD+ synthase, putative [Trypanosoma cruzi] Length = 294 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 43/229 (18%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI--------MLPYKYTSP 333 +L +Y+ + + +SGGIDSA+ A+ A+ N + + + Sbjct: 36 ALNEYMASHGLKVCVTSVSGGIDSAVVLALCSRAMRMPNSPIVRNVGICQPICSSAWALA 95 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN-----IQSRIRG 388 + E+ +C AL D +H ++ E GI +N ++S +R Sbjct: 96 RGRENIQSCG-ALEVIVDQTELHKQLSRIV--------ETAVGIDGQNFARGQLRSYMRT 146 Query: 389 NILMALSN-----HSKAMLLTTSNKSEIS-VGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 + ++ + A+++ T N E + Y GD + DL+K++VF++A Sbjct: 147 PVAYYVAQLYSQEGNAAIVMGTGNMDEDGYLAYFCKAGDGVVDVQLIADLHKSEVFRVA- 205 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILD 490 LG +P L+ SPSA+L QTD+E L PY ++ Sbjct: 206 --------RELG-----VPADTLQASPSADLWEGQTDEEELGFPYDFVE 241 >gi|254496734|ref|ZP_05109595.1| amidohydrolase [Legionella drancourtii LLAP12] gi|254354050|gb|EET12724.1| amidohydrolase [Legionella drancourtii LLAP12] Length = 281 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 11/138 (7%) Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPI-VFRDIRLGILIC 150 ++ G +V + G + A+ K ++P+ ++HE F G SN P+ + G+ C Sbjct: 93 EKAGYNTAVAYNEQGELTAITRKQHIPSGEKYHEDFYFKPGDSNYPVHSIAGHQWGLPTC 152 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNA------SPYYHNK-LKKRHEIVTGQISHVHLPII 203 D W + + +GAE L A +P + ++ + ++ + G +S+ II Sbjct: 153 YDQW-FPELSRIYGLKGAEILVYPTAIGGEPTAPGFDSQPMWQKVMVAQGIMSNTF--II 209 Query: 204 YVNQVGGQDELIFDGASF 221 N++G +D+L F G+SF Sbjct: 210 AANRIGREDDLEFYGSSF 227 >gi|88854344|ref|ZP_01129011.1| putative hydrolase [marine actinobacterium PHSC20C1] gi|88816152|gb|EAR26007.1| putative hydrolase [marine actinobacterium PHSC20C1] Length = 282 Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 30/200 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY---------- 51 + ++ AI Q GD I K + +A +QG +I F ELF Y Sbjct: 1 MTTVRAAITQTT-WTGDKESMIQKHEQFARDAKQQGAQIICFQELFYGPYFGITEDKKYY 59 Query: 52 ---PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-G 106 P D K F QA + +D + +++ + GV N+ V++D+ G Sbjct: 60 AYAEPVDGPIVKRF-QALAKELDMV----------MILPIYEEAMTGVYYNTAVVVDSDG 108 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKK 165 + K ++PN +F EK F G P+ + ++G+ IC D + L Sbjct: 109 TNLGSYRKHHIPNLDKFWEKFYFRPGNLGFPMFNTAVGKVGVHICYDR-HFPEGWRELGL 167 Query: 166 QGAEFLFSLNAS-PYYHNKL 184 GAE +F+ NA+ P N+L Sbjct: 168 NGAEIVFNPNATKPGLSNRL 187 >gi|304440526|ref|ZP_07400413.1| nitrilase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371004|gb|EFM24623.1| nitrilase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 306 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 30/47 (63%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIA+ Q PV+ + + ++ K + +EA Q +LI+F ELFI GYP Sbjct: 9 KIALVQAEPVMFNKSASLEKVLQYIDEAASQNSELIVFPELFIPGYP 55 >gi|94039519|dbj|BAE93535.1| NAD synthase [Mulberry dwarf phytoplasma] Length = 112 Score = 41.6 bits (96), Expect = 0.41, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +A VG+ + KA + N+ +LF EL +S Y DL F+ +F++ Sbjct: 7 IKIELASPPLTVGN---PLKKAYSMQNVLNKSKASFVLFPELCLSSYTAGDLFFETTFLE 63 Query: 65 ACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 A+D LK+++ +G ++G P E + N VI+ I+ + K Sbjct: 64 QNFQALDWLLKNNSFEG--VYILGMPLALHEVLFNVAVIIQKDKILGITPK 112 >gi|53803841|ref|YP_114299.1| carbon-nitrogen family hydrolase [Methylococcus capsulatus str. Bath] gi|53757602|gb|AAU91893.1| hydrolase, carbon-nitrogen family [Methylococcus capsulatus str. Bath] Length = 295 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 59/290 (20%), Positives = 115/290 (39%), Gaps = 41/290 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +++A+ Q G N+A + + +G DL++ EL + Y F + Sbjct: 1 MKSTIELALVQ-QACNGSREQNLAASVEGIRRSKAKGADLVMLPELHLGPY------FCQ 53 Query: 61 SFIQACSSAIDTLKSDT--------HDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIA 110 + +C +T+ T + G +V + G+ N+ V+LD+ G++ Sbjct: 54 TEDCSCFDGAETIPGPTTAELGSVARELGVVVVASLFERRAPGLYHNTAVVLDSDGSLAG 113 Query: 111 VRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K+++P+ ++EK F G PI RLG+L+C D W + + GA+ Sbjct: 114 KYRKMHIPDDPGYYEKFYFTPGDLGFRPIDTSVGRLGVLVCWDQWY-PEAARLMALAGAD 172 Query: 170 FLF-----SLNASPYYHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDE-------L 214 L N + + ++ +T Q H L + N++G + + + Sbjct: 173 LLLYPTAIGWNPADDEVERSRQLEAWITVQRGHAVANGLTVAACNRIGSEPDPSGQTPGI 232 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-----WNYMSD 259 +F G SF Q + + + M D++ S+ W ++ D Sbjct: 233 LFWGNSFAAGPQGEFLCRAGSADTELLMVT--VDRKRSEDVRRIWPFLRD 280 >gi|312864083|ref|ZP_07724319.1| NAD+ synthase [Streptococcus vestibularis F0396] gi|311100496|gb|EFQ58703.1| NAD+ synthase [Streptococcus vestibularis F0396] Length = 273 Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 39/230 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKE---NVQ--TIMLPYKYTSP 333 L+ Y+ K+ F K ++G+SGG DS L A +AV+ L E N Q I LPY Sbjct: 30 LKAYMLKHPFLKSYVLGISGGQDSTLAGRLAQLAVEELRAETGKNYQFIAIRLPY---GV 86 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 Q+ ED A A A K DV VN ++ Q + +G+ NI++R R Sbjct: 87 QADEDDAQRALAF-IKPDV---SLAVNIKEAVDGQVAELAKAGVTVSDFNKGNIKARQRM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ + ++ T + +E G+ T +GD PL L K R Sbjct: 143 ITQYAVAGENSGAVIGTDHAAENLTGFFTKFGDGGADILPLFRLNK---------RQGAA 193 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + + LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 194 LLAELGA-----DKALYEKVPTADLEEDKPGIADEVALGVTYREIDDYLE 238 >gi|189211761|ref|XP_001942209.1| nitrilase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979408|gb|EDU46034.1| nitrilase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 348 Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 18/136 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF----- 58 K K+A A P+ D A I K + E+A ++ + L++F E FI GYP + Sbjct: 7 KFKVAAAHAAPIFMDKAATIKKTVQLIEQAAKEDIKLLVFPETFIPGYPYWTEAYPPLKQ 66 Query: 59 ---------KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDA-G 106 + ++ + ++ G I +G + G + NS VI+D+ G Sbjct: 67 VAAIAKYAEESVVVEPNGEDVSAIQDACRRTGIAINLGISERIANGHTLFNSQVIIDSDG 126 Query: 107 NIIAVRDKINLPNYSE 122 I+ V K+ P + E Sbjct: 127 TILGVHRKLQ-PTFVE 141 >gi|311085917|gb|ADP65999.1| NAD synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086488|gb|ADP66569.1| NAD synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 268 Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 40/237 (16%) Query: 273 EADYNACVLSLRDYVQKNNFH--KVIIGLSGGIDSALCAAIA---VDALGKENVQTIMLP 327 E + CV L+ Y+ N+ H +I+G+SGG DS L A + + L KE + Sbjct: 20 EIEIKNCVDFLKKYLV-NHVHIKSLIVGVSGGQDSTLTAKLCQMTAETLRKEKND---IT 75 Query: 328 YKYTS---PQSLE-DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-- 380 Y++ + P ++ D C A+ + P VN +++S + SG++ Sbjct: 76 YQFIALRLPYGIQYDEKDCQDAIRF---IQPDQIFNVNIKKAVLSSEKSLKKSGVIISDY 132 Query: 381 ---NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 N ++R R + +++ + +++ T + +E G+ T YGD NP+ L K Q+ Sbjct: 133 VRGNEKARERMKVQYSIAAMKQGLVVGTGHAAENITGFFTKYGDSGTDINPIAKLNKRQI 192 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESL-PPYPILD 490 L N P + K P A+L P Q D+ L Y ++D Sbjct: 193 RLLLKNLNC--------------PKHLYLKKPMADLEDEHPQQDDESVLGVTYDVID 235 >gi|242238253|ref|YP_002986434.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Dickeya dadantii Ech703] gi|242130310|gb|ACS84612.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Dickeya dadantii Ech703] Length = 590 Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 7/104 (6%) Query: 18 DIAGNIAK-ARRAREEANRQGMDLILFTELFISGY-PPEDLVFKKSFIQACSSAIDTLKS 75 DIAGN+A+ A AR+ ++QG +L++F EL ++GY PE + I S + L Sbjct: 304 DIAGNVARMAALARQTIDQQGSELLVFPELAVTGYDAPE-----QRAIALESPLLRPLLQ 358 Query: 76 DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + G QD E N++++L ++ +I+LP Sbjct: 359 LAMTHRVWLAFGLAEQDGERRYNTLLLLGPEGVVGHYRQIHLPQ 402 >gi|302818960|ref|XP_002991152.1| hypothetical protein SELMODRAFT_133005 [Selaginella moellendorffii] gi|300141083|gb|EFJ07798.1| hypothetical protein SELMODRAFT_133005 [Selaginella moellendorffii] Length = 354 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 31/212 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ ++ Q + + GD IAKA + A G L++F E F+ GYP Sbjct: 25 VRASVVQASTIYGDTPATIAKAEKLIAAAATLGSQLVVFPEAFVGGYPRGSTFGTAVGYR 84 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN 107 E + I +D L + +V+G + + S++ D+ Sbjct: 85 SSQGREEFRRYHSCAIDVPGPEVDLLAAAAAKFRVNLVMGVIERSGGTLYCSILFFDSQG 144 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGY---SNDPIVFRDI-RLGILICEDIWKNSN--ICK 161 + + + +P +E I GY S P+ ++ R+G L+C W+N + Sbjct: 145 VFLGKHRKCVPTAAE-----RLIFGYGDGSTLPVYKTELGRVGGLVC---WENRMPLLRT 196 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTG 193 L +G EF + A + RH V G Sbjct: 197 ALYAKGVEFYCAPTADSREAWQATIRHIAVEG 228 >gi|119194561|ref|XP_001247884.1| conserved hypothetical protein [Coccidioides immitis RS] Length = 417 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 23/172 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE------ 54 + K LK+A+ QL D A N+A+AR EA R G LI+ E F S Y + Sbjct: 5 LKKPLKLALVQLA-TGPDKAVNLARARSKVLEAARSGASLIVLPECFNSPYGTQFFPHYA 63 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEGVLNSVVILDAGNIIA 110 + + S + TL S + A +V G + + ++ S+V G++IA Sbjct: 64 ETLLPSPPTTEQSPSFHTLSSIAAEAKAYLVGGSIPEYVPETKQYFNTSLVFSPTGSLIA 123 Query: 111 VRDK-----INLPNYSEFHEKRTFISGYSNDPIVFRDI----RLGILICEDI 153 K I++P +F E +G + I D+ ++G+ IC DI Sbjct: 124 THRKTHLFDIDIPGKIKFKESEVLSAG---NKITIVDLPEYGKVGLAICYDI 172 >gi|126658519|ref|ZP_01729667.1| hypothetical protein CY0110_21380 [Cyanothece sp. CCY0110] gi|126620261|gb|EAZ90982.1| hypothetical protein CY0110_21380 [Cyanothece sp. CCY0110] Length = 276 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 + +I SGGIDS L A +A D LG + + P+ LEDA A +G ++ Sbjct: 16 MERALIAYSGGIDSTLVAKVAYDVLGDRALAVTAVSPSLL-PEELEDAKIQAATIGIPHE 74 Query: 352 VLPIHDLVNHFFS 364 ++ H++ N ++ Sbjct: 75 LVNTHEMDNPNYT 87 >gi|327387211|gb|AEA58684.1| hypothetical protein LCBD_p44 [Lactobacillus casei BD-II] Length = 276 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 32/58 (55%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 + +V + SGGIDS L +A+D LG++NV ++ + + + A + A+ LG Sbjct: 17 DLQRVTVAFSGGIDSTLVLKMALDVLGRDNVTAVVANSELFMDEEFDKAMSLAEELGA 74 >gi|302561760|ref|ZP_07314102.1| delta-aminovaleramide aminohydrolase [Streptomyces griseoflavus Tu4000] gi|302479378|gb|EFL42471.1| delta-aminovaleramide aminohydrolase [Streptomyces griseoflavus Tu4000] Length = 262 Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 17/187 (9%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 L++ +ELF++GY D + + + +A + G A I G+P +D E V NS Sbjct: 36 LLVTSELFLTGYAIGDDMPRLAEPADGDAAAAIAGTAARHGLA-IAYGYPERDGERVFNS 94 Query: 100 VVILDAGNIIAVRDKINLPNYSEFH-----EKRTFISG-YSNDPIVFRDIRLGILICEDI 153 + ++ A D L NY + H E+ F G S + +G++IC D+ Sbjct: 95 LQLISA-------DGTRLANYRKTHLFGCFEREHFTPGEQSVVQAELNGLTVGLMICYDV 147 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 N+ H G + L A + + + +V + + + YVN+VG + E Sbjct: 148 EFPENVRAH-ALAGTDLLLVPTAQMHPFQFVAE--HMVPVRAFENQMYVAYVNRVGPEGE 204 Query: 214 LIFDGAS 220 F G S Sbjct: 205 FEFVGLS 211 >gi|316964494|gb|EFV49574.1| GMP synthase (glutamine-hydrolyzing) [Trichinella spiralis] Length = 469 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 54/237 (22%), Positives = 86/237 (36%), Gaps = 38/237 (16%) Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 E +AC+ +++ V+ KV+I SGG+DS +CA + ALGK V + + + Sbjct: 226 ENRLSACLNEIKNTVKDK---KVLILCSGGVDSTVCAVLLRKALGKSKVIPVFIDNGFLR 282 Query: 333 PQSLEDAAACAKALG----CKY-----------------DVLPIHDLVNHFFSLMSQFLQ 371 + K+L C Y LPIHD L+ F Sbjct: 283 KNEATEVVEMLKSLDFDVKCSYCLYSCVCPFNKSREFIHSTLPIHD------KLLGAFED 336 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 ++ RI G+ M + + L N E+ + GTL D+ Sbjct: 337 AMLCRTCNPEMKRRIIGDTFMRMIKYIARQL--KLNMKEVYLAQGTLRPDL---IESASQ 391 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPI 488 L + + + N + L +I P L+ E+R D +LP Y I Sbjct: 392 LVSSHADTIKTHHNDTSLVRALRACGRIIEP--LKDFHKDEVRALARDL-NLPDYVI 445 >gi|148975566|ref|ZP_01812437.1| putative carbon-nitrogen hydrolase [Vibrionales bacterium SWAT-3] gi|145964994|gb|EDK30245.1| putative carbon-nitrogen hydrolase [Vibrionales bacterium SWAT-3] Length = 320 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 34/200 (17%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PED 55 M + +K+A Q N GD A N++ ++A G+++I F E+ I+GY P D Sbjct: 1 MKRDIKVASVQFNHHAGDKAYNLSVIEHYVQQAADSGVEIISFPEMCITGYWHVSALPRD 60 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 + + +I L S G + G Q +G L + + Sbjct: 61 EIEALAEPVPSGESIQKLVSLATQFGMSVGAGLIEQGTDGELYNTYVF------------ 108 Query: 116 NLPNYSEFHEKR---TFISGY--SNDPIVFRDI----RLGILICEDIWKNSNICKHLK-- 164 +PN E + R TF+S Y S D D ++GILIC W N N+ ++++ Sbjct: 109 AMPN-GEVQKHRKLHTFVSPYMSSGDQYTVFDTPHGCKVGILIC---WDN-NLVENVRIT 163 Query: 165 -KQGAEFLFSLNASPYYHNK 183 +GA+ L + + + H++ Sbjct: 164 ALKGADILIAPHQTGGCHSR 183 >gi|123968206|ref|YP_001009064.1| putative nitrilase [Prochlorococcus marinus str. AS9601] gi|123198316|gb|ABM69957.1| Possible nitrilase [Prochlorococcus marinus str. AS9601] Length = 275 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 14/166 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N +A E A R+G +LI E F G E L C++ + T+ Sbjct: 16 NVEANFTEAEEQIELAARRGAELIGLPENFAFLGGDDEKLRLASELSVKCTNFLKTMSQR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P D N S + G I+A DKI +LP+ + + E T + Sbjct: 76 YQVFLLGGGYPVPAGDDSHTFNRSALFGKDGQILAKYDKIHLFDVDLPDGNLYKESSTIL 135 Query: 131 SGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG P+V D+ ++G+ IC D+ + + ++L GAE + Sbjct: 136 SGAEYPPVV--DVPGLCKIGLSICYDV-RFPELYRYLSSNGAELIM 178 >gi|115359384|ref|YP_776522.1| NAD synthetase [Burkholderia ambifaria AMMD] gi|115284672|gb|ABI90188.1| NH(3)-dependent NAD(+) synthetase [Burkholderia ambifaria AMMD] Length = 295 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 26/225 (11%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLPYKYTSPQSLE-D 338 L Y++ + ++G+SGG+DS+ A +AV+ L + + P ++ D Sbjct: 49 LAQYLRSSGLRTYVLGISGGVDSSTAGRLAQLAVEQLRAGGYDARFIAMRL--PNGVQND 106 Query: 339 AAACAKALGC-------KYDVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 A +AL DV P D ++ + F V NI++R R Sbjct: 107 EADAQRALAFVRADETFTVDVKPAADAMLASLVASGHAFETPAQQDFVHGNIKARERMIA 166 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ + +++ T + +E +G+ T +GD PL L K +V +A + Sbjct: 167 QYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADVLPLAGLSKRRVRAVARALGGDEL- 225 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 + +P + LE ELRP + D+ + Y +DD ++ Sbjct: 226 -----IVMKVPTADLE-----ELRPLRPDEHAYGVTYDEIDDFLE 260 >gi|67923165|ref|ZP_00516654.1| Conserved hypothetical protein 268 [Crocosphaera watsonii WH 8501] gi|67855007|gb|EAM50277.1| Conserved hypothetical protein 268 [Crocosphaera watsonii WH 8501] Length = 276 Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 + +I SGGIDS L A +A D LG + + P+ LEDA A +G ++ Sbjct: 16 MERALIAYSGGIDSTLVAKVAYDVLGDRALGVTAVSPSLL-PEELEDAKIQAATIGISHE 74 Query: 352 VLPIHDLVNHFFS 364 ++ H++ N ++ Sbjct: 75 LVNTHEMDNPNYT 87 >gi|284165009|ref|YP_003403288.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Haloterrigena turkmenica DSM 5511] gi|284014664|gb|ADB60615.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Haloterrigena turkmenica DSM 5511] Length = 277 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 17/190 (8%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----------- 51 + L++A+AQL + N+ +A A A +G DL+ ELF GY Sbjct: 7 ETLRLALAQLEVEPTAVDENVERALEAISRAAERGADLVALPELFNVGYFAFDSYNRLAE 66 Query: 52 PPEDLVFKKSFIQACSSAIDTLK-SDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 P E + A I L S D A P +EG+ N+ + DA G + Sbjct: 67 PLEGETLTRLREAAADHEIAVLAGSIVEDLAATETADTPA--EEGLANTAALFDADGGLQ 124 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 V K +L Y + E + G + + +G C D+ + + + L GAE Sbjct: 125 LVYRKHHLFGY-QSAESELLVPGERIETATVAGVPVGATTCYDL-RFPELYRRLIDAGAE 182 Query: 170 FLFSLNASPY 179 + +A PY Sbjct: 183 LVLVPSAWPY 192 >gi|330508537|ref|YP_004384965.1| hypothetical protein MCON_2758 [Methanosaeta concilii GP-6] gi|328929345|gb|AEB69147.1| conserved hypothetical protein TIGR00268 [Methanosaeta concilii GP-6] Length = 265 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 5/83 (6%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAA 341 L+D +++ +++I SGG+DS+L A +A D LG+ V I+ Y P+S LE+A A Sbjct: 10 LKDRIREK--ERLLISYSGGVDSSLLAKLAHDVLGEGAVAVILDSEIY--PRSELEEAVA 65 Query: 342 CAKALGCKYDVLPIHDLVNHFFS 364 A++LG + V L + FS Sbjct: 66 LAESLGLELRVERFSILDDQAFS 88 >gi|325474627|gb|EGC77813.1| carbon-nitrogen family Hydrolase [Treponema denticola F0402] Length = 243 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 44/229 (19%), Positives = 93/229 (40%), Gaps = 17/229 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + DI NI++ E+ + DL+LF E F+ G+ +KK + Sbjct: 1 MKIGLCASENKNNDIDFNISQIEGFIEKTRSEKPDLLLFGESFLQGFYSLCFEYKKDILT 60 Query: 65 AC---SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL--- 117 A S I ++S I GF D + +S +I+ G ++ + +++ Sbjct: 61 ALQINSEPIAKIRSIAQKEKTAIGFGFIENDHGAIFSSYMIVGKNGEMLCLYKRVSQGWR 120 Query: 118 --PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +++ E + F F RL + IC D+W+++ + + FL+ + Sbjct: 121 IEGTCADYREGKEFFE------FDFGGKRLAVFICGDLWEDNLLEPIISLNPDAFLWPVF 174 Query: 176 ASPYYHNKLKKRHEIVTGQISHV-HLPIIYVNQVGGQDELIFDGASFCF 223 Y + K + + + P++++N + ++ G +F + Sbjct: 175 CG-YTKEEWKNGEAAAYAERTAILDKPVLFINSLVNENAKAIGGGAFVW 222 >gi|294794492|ref|ZP_06759628.1| ExsB protein [Veillonella sp. 3_1_44] gi|294454822|gb|EFG23195.1| ExsB protein [Veillonella sp. 3_1_44] Length = 229 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG+DS C A+A++ GK+NV + + Y + LE A A + K Sbjct: 5 QKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNMKGKT 64 Query: 353 LPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + + L SL+ Q ++ P G E + +G + Sbjct: 65 MDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTV 103 >gi|293365792|ref|ZP_06612498.1| NH(3)-dependent NAD(+) synthetase [Streptococcus oralis ATCC 35037] gi|307703340|ref|ZP_07640284.1| NAD+ synthetase [Streptococcus oralis ATCC 35037] gi|291315725|gb|EFE56172.1| NH(3)-dependent NAD(+) synthetase [Streptococcus oralis ATCC 35037] gi|307623116|gb|EFO02109.1| NAD+ synthetase [Streptococcus oralis ATCC 35037] Length = 274 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 30/254 (11%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + + + + L+ Y++K F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PVIDAQEEIRRSIDFLKRYLKKYPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDD 74 Query: 327 PYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV---A 379 Y++ S P ++ D A KAL + + + M+ ++ S + Sbjct: 75 SYQFISVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEATGSPVSDFNK 134 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 NI++R R AL+ ++ T + +E G+ T +GD PL L K Q Q Sbjct: 135 GNIKARSRMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQ 194 Query: 440 LASWRNSHGITSGLGPLTEVIPPSIL-EKSPSAEL---RPHQTDQESLP-PYPILDDII- 493 L L E+ S L EK P+A+L +P D+ +L Y +DD + Sbjct: 195 L---------------LKELGADSALYEKIPTADLEEDKPGLADEVALGVTYNEIDDYLE 239 Query: 494 -KRIVENEESFINN 506 K I ++ I N Sbjct: 240 GKTISPEAQATIEN 253 >gi|296138570|ref|YP_003645813.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Tsukamurella paurometabola DSM 20162] gi|296026704|gb|ADG77474.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Tsukamurella paurometabola DSM 20162] Length = 282 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 8/189 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFK 59 + ++ AI Q GD A + K +A G ++ F ELF Y ED + Sbjct: 1 MTVIRAAITQAT-WTGDEASMVDKHEALARQAAADGAQIVCFQELFHGPYFGIVEDAKYY 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRDKINL 117 + Q + + + G IV+ ++ G+ N+ +LDA G+ + K ++ Sbjct: 60 EYAQQVPGPLTERFGALAKELGVVIVLPVYEEEMPGLYYNTAAVLDADGSYLGKYRKHHI 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 PN F EK F G P+ + ++G+ IC D + L GAE +F+ +A Sbjct: 120 PNLDRFWEKFYFRPGNLGYPVFDTAVGKVGVYICYDR-HFPEGWRELGLGGAELVFNPSA 178 Query: 177 S-PYYHNKL 184 + P N+L Sbjct: 179 TKPGLSNRL 187 >gi|126445465|ref|YP_001063095.1| NAD synthetase [Burkholderia pseudomallei 668] gi|126224956|gb|ABN88461.1| NH(3)-dependent NAD(+) synthetase [Burkholderia pseudomallei 668] Length = 340 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 84/213 (39%), Gaps = 31/213 (14%) Query: 285 DYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQT----IMLPYKYTSPQSLE 337 DY++ ++G+SGGIDS+ A +AV+ L + LPY + Sbjct: 94 DYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG-----AQH 148 Query: 338 DAAACAKALG-------CKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGN 389 D A +AL DV P D + + + V NI++R R Sbjct: 149 DEADARRALAFVRADETLTVDVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMI 208 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 A++ +++ T + +E +G+ T +GD PL L K +V LA + Sbjct: 209 AQYAVAGARNGVVIGTDHAAESVMGFFTKFGDGGADVLPLAGLTKRRVRALAR------M 262 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 PL P + LE LRP + D+ + Sbjct: 263 LGADEPLVLKTPTADLET-----LRPQRPDEHA 290 >gi|229542770|ref|ZP_04431830.1| ExsB family protein [Bacillus coagulans 36D1] gi|229327190|gb|EEN92865.1| ExsB family protein [Bacillus coagulans 36D1] Length = 269 Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 32/64 (50%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++ SGG+DS +AVD LG + V + + LE+A A +G ++ V+ Sbjct: 18 VVVAFSGGVDSTFLLKVAVDVLGADKVLAVTADSETYPSTELEEAKKLAALIGARHQVIK 77 Query: 355 IHDL 358 +L Sbjct: 78 TSEL 81 >gi|260437275|ref|ZP_05791091.1| ExsB protein [Butyrivibrio crossotus DSM 2876] gi|292810585|gb|EFF69790.1| ExsB protein [Butyrivibrio crossotus DSM 2876] Length = 227 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + ++ SGG+DS C +AVD GKENV ++ + Y + LE A AK G ++ + Sbjct: 2 RALVLSSGGVDSTTCLGMAVDKYGKENVVSLSVFYGQKHTKELEAATKVAKYYGVEHMAI 61 Query: 354 PIHDLV-NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + + + SL+S ++ P AE ++ + G + + L T+ +S Sbjct: 62 DLSLIFKDSDCSLLSHSTEKIPHESYAEQLE-KTDGKPVSTYVPFRNGLFLATAASIALS 120 Query: 413 -----VGYGTLYGDMSGGFNP 428 + YG D +G P Sbjct: 121 KKCDVIYYGAHADDAAGNAYP 141 >gi|225685162|gb|EEH23446.1| predicted protein [Paracoccidioides brasiliensis Pb03] Length = 140 Score = 41.2 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 27/48 (56%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 L++AI Q PV D+ + K + EEA + G LI F E +I GYP Sbjct: 89 LRVAITQAEPVYLDLDATVEKTVKIIEEAAQGGAKLIAFPECWIPGYP 136 >gi|163753330|ref|ZP_02160454.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Kordia algicida OT-1] gi|161327062|gb|EDP98387.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Kordia algicida OT-1] Length = 318 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 32/49 (65%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KLK+A+AQ+ PV D + + K ++ +A++Q +LI+F E + GYP Sbjct: 6 KLKVALAQIAPVWLDKSKTLVKIKQQILDASQQNCELIVFGEALLPGYP 54 >gi|145631240|ref|ZP_01787013.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021] gi|144983167|gb|EDJ90662.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021] Length = 223 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 30/60 (50%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKENV+ I Y LE A A A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKAFAIAQDLGIK 66 >gi|78061224|ref|YP_371132.1| NAD synthetase [Burkholderia sp. 383] gi|123567042|sp|Q39AM3|NADE_BURS3 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|77969109|gb|ABB10488.1| NH(3)-dependent NAD(+) synthetase [Burkholderia sp. 383] Length = 282 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 26/237 (10%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC---AAIAVDALGKENVQTIMLP 327 + EA+ V L Y++ ++G+SGG+DS+ A ++V+ L + + Sbjct: 24 DAEAEIARRVEFLAQYLRSTGLRTYVLGISGGVDSSTAGRLAQLSVEKLRADGYDARFVA 83 Query: 328 YKYTSPQSLE-DAAACAKALG-------CKYDVLPIHD-LVNHFFSLMSQFLQEEPSGIV 378 + P ++ D A +AL +V P D ++ + F V Sbjct: 84 MRL--PNGVQNDEADAQRALAFVRADEELTVNVKPAADAMLGALAASGHAFETPAQQDFV 141 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 NI++R R A++ + +++ T + +E +G+ T +GD PL L K +V Sbjct: 142 HGNIKARERMIAQYAVAGARRGIVIGTDHAAESLMGFFTKFGDGGADILPLAGLNKRRVR 201 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIK 494 +A + + +P + LE ELRP + D+ + Y +DD ++ Sbjct: 202 AVARALGGEEL------IVMKVPTADLE-----ELRPLRPDEHAYGVSYDEIDDFLE 247 >gi|32491091|ref|NP_871345.1| NAD synthetase [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166298|dbj|BAC24488.1| nadE [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 274 Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust. Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 56/236 (23%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQ---------TIMLPYKYTSPQSLEDAAACAKA 345 +++G+SGG DS L I + + + + + LPY Sbjct: 43 LVLGVSGGQDSTLTGKICYEVIKEMKKKNNNLNYKFIALRLPY-----------GKQMDE 91 Query: 346 LGCKYDVLPIHD----LVNHFFSLMSQFLQEEPSGI-----VAENIQSRIRGNILMALSN 396 + CK + I+ +N ++ + + SGI + N +SR R + +++ Sbjct: 92 IDCKLAIKFINPDKVIKINIKSAVKASVFSLKKSGINITDHIKGNEKSRERMKVQYSVAG 151 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 + +++ T N +E G+ T +GD + NP+ L K QV ++ + Sbjct: 152 MTSGIVVGTCNAAESITGFFTKHGDSAVDLNPILHLNKRQVKKILIYLKC---------- 201 Query: 457 TEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII---------KRIVEN 499 P + K P+A+L RP D++SL Y ++DD + K I+EN Sbjct: 202 ----PKRLYSKIPTADLEDDRPGYPDEKSLGIKYDVIDDYLEGKIINLKMKNIIEN 253 >gi|240013446|ref|ZP_04720359.1| YbaX [Neisseria gonorrhoeae DGI18] gi|240080025|ref|ZP_04724568.1| YbaX [Neisseria gonorrhoeae FA19] gi|240112235|ref|ZP_04726725.1| YbaX [Neisseria gonorrhoeae MS11] gi|240114978|ref|ZP_04729040.1| YbaX [Neisseria gonorrhoeae PID18] gi|240120517|ref|ZP_04733479.1| YbaX [Neisseria gonorrhoeae PID24-1] gi|240125011|ref|ZP_04737897.1| YbaX [Neisseria gonorrhoeae SK-92-679] gi|240127524|ref|ZP_04740185.1| YbaX [Neisseria gonorrhoeae SK-93-1035] gi|260441207|ref|ZP_05795023.1| YbaX [Neisseria gonorrhoeae DGI2] gi|268596169|ref|ZP_06130336.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae FA19] gi|268598293|ref|ZP_06132460.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae MS11] gi|268600646|ref|ZP_06134813.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID18] gi|268683597|ref|ZP_06150459.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae SK-92-679] gi|268685900|ref|ZP_06152762.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae SK-93-1035] gi|291044541|ref|ZP_06570250.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|268549957|gb|EEZ44976.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae FA19] gi|268582424|gb|EEZ47100.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae MS11] gi|268584777|gb|EEZ49453.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID18] gi|268623881|gb|EEZ56281.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae SK-92-679] gi|268626184|gb|EEZ58584.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae SK-93-1035] gi|291011435|gb|EFE03431.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 219 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLGVKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI 377 L + SLM Q L +E + I Sbjct: 64 LDL--------SLMRQITHNALMDETAAI 84 >gi|304390213|ref|ZP_07372167.1| NAD synthetase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326695|gb|EFL93939.1| NAD synthetase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 703 Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 50/171 (29%) Query: 294 KVIIGLSGGIDSALCAAIAV------------------------------------DALG 317 +I+G+SGG+DS L +A D+ G Sbjct: 327 NIILGISGGLDSTLALLVATAARDSALAHESERQTAEPNRKSNDLLSPAEHLENTRDSAG 386 Query: 318 -KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 K + T LP TS + +A A A+G +++ I M P+G Sbjct: 387 CKPEILTFTLPGFATSAHTKSNAQKLAAAVGVNCELIDIRPAATEMLKTMGH-----PAG 441 Query: 377 -------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + EN+Q+ +R + L L+N +L T + SE ++G+ T YG Sbjct: 442 HGEPIYDVTFENVQAGLRSDYLFRLANQRHGFVLGTGDLSESALGW-TTYG 491 >gi|327393095|dbj|BAK10517.1| hydrolase carbon-nitrogen family YbeM [Pantoea ananatis AJ13355] Length = 255 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 13/173 (7%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSA----IDTLKSDT 77 N+ + ++A+R G DL++ E ++ D+ ++A + L S + Sbjct: 7 NVITCQDMMDQASRAGADLLVLPEAVLA----TDITNPDFILEAAQPPDGPFLSQLLSAS 62 Query: 78 HDGGAGIVVGFPRQDQE-GVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSND 136 G V+G E V N +V++ G I+A K++L + E + +G Sbjct: 63 KGHGLTTVLGMHMPGSERKVFNVLVVIRDGKIVAEYRKLHLYDAFAMQESKRVEAGQEIP 122 Query: 137 PIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 P+V +++G++ C D+ + + + L +GAE L +A + LK+ H Sbjct: 123 PLVDVAGMKVGLMTCYDV-RFPELSRRLALEGAEVLVLPSA--WVKGPLKEMH 172 >gi|311087071|gb|ADP67151.1| NAD synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 268 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 39/234 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFH--KVIIGLSGGIDSALCAAIA---VDALGKENVQ 322 P+ E + CV L+ Y+ N+ H +I+G+SGG DS L A + + L KE Sbjct: 15 PVIIPEIEIKNCVDFLKKYLV-NHVHIKSLIVGVSGGQDSTLTAKLCQMTAETLRKEKND 73 Query: 323 TIMLPYKYTS---PQSLE-DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGI 377 + Y++ + P ++ D C A+ + P VN +++S + SG+ Sbjct: 74 ---ITYQFIALRLPYGIQYDEKDCQDAIRF---IQPDQIFNVNIKKAVLSSEKSLKKSGV 127 Query: 378 VAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 + N ++R R + +++ + +++ T + +E G+ T YGD NP+ L Sbjct: 128 IISDYVRGNEKARERMKVQYSIAAMKQGLVVGTGHAAENITGFFTKYGDSGTDINPIAKL 187 Query: 433 YKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESL 483 K Q+ L N P + K P A+L P Q D+ L Sbjct: 188 NKRQIRLLLKNLNC--------------PKHLYLKKPMADLEDEHPQQDDESVL 227 >gi|282849824|ref|ZP_06259208.1| protein ExsB [Veillonella parvula ATCC 17745] gi|282580761|gb|EFB86160.1| protein ExsB [Veillonella parvula ATCC 17745] Length = 229 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG+DS C A+A++ GK+NV + + Y + LE A A + K Sbjct: 5 QKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNMKGKT 64 Query: 353 LPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + + L SL+ Q ++ P G E + +G + Sbjct: 65 MDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTV 103 >gi|259502709|ref|ZP_05745611.1| carbon-nitrogen family hydrolase [Lactobacillus antri DSM 16041] gi|259169354|gb|EEW53849.1| carbon-nitrogen family hydrolase [Lactobacillus antri DSM 16041] Length = 261 Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 9/223 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV-FKKSF 62 K+K+A+ Q N A N A+ R A D+++ E++ +GY + L Sbjct: 2 KIKVALGQFNIQFAQPAANRARVRELVATAAAGNADVVVLPEMWNTGYALDALPQLADED 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 + + + L H G G V D +N +++D GN++ DK++L + Sbjct: 62 GRTTLALLQELARQYHIGIVGGSVAVKTGDH--FVNRTLVVDPLGNLLGQYDKVHL--FG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 E R ++G + + IC D+ + + + + GA+ L+ P Sbjct: 118 LMAEDRYLVAGDQENYFRLAGVPSASFICYDL-RFPEWIRTVARHGADVLYFPAEWPAV- 175 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++ + ++ + ++ VN+VG + F+G S D Sbjct: 176 -RIPQWKLLLQVRAVENQCFVVAVNRVGDDPDNHFNGHSLAID 217 >gi|322386104|ref|ZP_08059741.1| NH(3)-dependent NAD(+) synthetase [Streptococcus cristatus ATCC 51100] gi|321269873|gb|EFX52796.1| NH(3)-dependent NAD(+) synthetase [Streptococcus cristatus ATCC 51100] Length = 274 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDAL----GKE 319 P+ + + + V L+ Y++K+ F K ++G+SGG DS L A IAV+ + G E Sbjct: 15 PIIDPKEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQIAVEEMRAETGDE 74 Query: 320 NVQ--TIMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + + + LPY Q+ ED A A A + DV L ++ + M++ ++ + Sbjct: 75 SYRFIAVRLPYGI---QADEDDAQKALAF-IQPDVSLTVN--IKESADAMTKAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K Q QL + LG P++ EK P+A+L +P D+ +L Y + Sbjct: 189 KRQGKQL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|296315121|ref|ZP_06865062.1| ExsB protein [Neisseria polysaccharea ATCC 43768] gi|296838036|gb|EFH21974.1| ExsB protein [Neisseria polysaccharea ATCC 43768] Length = 219 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 13/94 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHDVELERARWIAQDLGVKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI-VAEN 381 L + SLM Q L +E + I AEN Sbjct: 64 LDL--------SLMRQITHNALMDEAAAIETAEN 89 >gi|294792739|ref|ZP_06757886.1| ExsB protein [Veillonella sp. 6_1_27] gi|294456638|gb|EFG25001.1| ExsB protein [Veillonella sp. 6_1_27] Length = 229 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG+DS C A+A++ GK+NV + + Y + LE A A + K Sbjct: 5 QKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNMKGKT 64 Query: 353 LPIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNI 390 + + L SL+ Q ++ P G E + +G + Sbjct: 65 MDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTV 103 >gi|253583302|ref|ZP_04860500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium varium ATCC 27725] gi|251833874|gb|EES62437.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium varium ATCC 27725] Length = 346 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 17/147 (11%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA----LGCK 349 KV+IG+SGG+DS++ A + L E I + + +SL+D A+ LG + Sbjct: 5 KVVIGMSGGVDSSVAAYL----LKSEGYGVIGVTLNHKKEESLKDEIKAAQRICHFLGIE 60 Query: 350 YDVLPIHDL-----VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 + ++ I +L ++ F SQ + P I E ++ + IL +++ A + Sbjct: 61 HKIIDIEELFQKEVIDDFLEGYSQGITPSPCVICDEKVKMK----ILFEIADKENADFVA 116 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKD 431 T + S + + ++P KD Sbjct: 117 TGHYSSVEYSEEFKTSLLKVSYDPRKD 143 >gi|227515257|ref|ZP_03945306.1| PP-loop superfamily ATP-binding protein [Lactobacillus fermentum ATCC 14931] gi|227086386|gb|EEI21698.1| PP-loop superfamily ATP-binding protein [Lactobacillus fermentum ATCC 14931] Length = 278 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 30/171 (17%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 +++V++G SGGIDS + A+D LG +NV ++ + E A AK +G + Sbjct: 18 YNRVVVGFSGGIDSTVVLKEALDVLGHDNVLAVVANSELFLDAEYEMAGQLAKDMGAQVT 77 Query: 352 VLPIHDLVN---------HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 + + L N ++++ F Q N + + G I+ Sbjct: 78 GIQLDYLANDQIKHNTPESWYAMKQMFYQAMTQVATQFNADAVLDGMIM----------- 126 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLK--DLYKTQVFQLASWRNSHGITS 451 + ++ G D +G +PL+ DLYK +V +LA S G+T+ Sbjct: 127 ---DDNADFRPGLRA--RDEAGAVSPLQTADLYKREVRELA---QSLGLTN 169 >gi|40063017|gb|AAR37873.1| hydrolase, carbon-nitrogen family [uncultured marine bacterium 560] Length = 255 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 17/227 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A LN D+ N+ +A + +A G D+++ E+F +G+ + V K + + Sbjct: 1 MKVATISLNIAWQDVEKNLERAEKFVLQAKADGCDVVVLPEVFNTGFIAD--VGKYAELP 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSE 122 C + L+ + IV G ++ E N ++ D+ GN +A K++ NY+ Sbjct: 59 NCKTH-HALQQFALNNLINIVAGASEKKPNEKAHNIALVFDSHGNEVAKYSKLHPFNYA- 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 +E + F SG + + IC D+ + I + + K+ E +F + P H Sbjct: 117 -NEGKYFASGNETIKFELDGVACSVFICYDL-RFPEIFRQIAKE-VEVIFVVANWP--HT 171 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + ++ + I+ VN++G DG ++G + Sbjct: 172 REMHWQNLLIARAIENQCFIVGVNRIGN------DGVGLKYNGSSMV 212 >gi|306824903|ref|ZP_07458247.1| NAD+ synthetase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433114|gb|EFM36086.1| NAD+ synthetase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 274 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 46/247 (18%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++K+ F K ++G+SGG DS L +A A+ + +T + LPY + Sbjct: 30 LKRYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDDSYQFIAVRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLP-IHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRI 386 D A KAL + P + +VN S + E +G NI++R Sbjct: 90 -----DEADAQKALAF---IQPDVSLVVNIKESADAMAAAVEATGSPVSDFNKGNIKARS 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R AL+ ++ T + +E G+ T +GD PL L K Q QL Sbjct: 142 RMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQL------ 195 Query: 447 HGITSGLGPLTEV-IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDII--KRIVEN 499 L E+ P++ EK P+A+L +P D+ +L Y +DD + K I Sbjct: 196 ---------LKELGADPALYEKIPTADLEEEKPGIADEVALGVTYNEIDDYLEGKTISPE 246 Query: 500 EESFINN 506 ++ I N Sbjct: 247 AQATIEN 253 >gi|256788943|ref|ZP_05527374.1| hydrolase [Streptomyces lividans TK24] gi|289772831|ref|ZP_06532209.1| hydrolase [Streptomyces lividans TK24] gi|289703030|gb|EFD70459.1| hydrolase [Streptomyces lividans TK24] Length = 262 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 21/189 (11%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 L++ +ELF++GY D V + +A + G A + G+P +D E V NS Sbjct: 36 LLVTSELFLTGYAIGDAVGVLAEPADGDAADAVAEIAGRHGLA-VAYGYPERDGERVFNS 94 Query: 100 VVILDAGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIV---FRDIRLGILICE 151 V ++ A D L Y + H E+ F G P+V + +G++IC Sbjct: 95 VQLIAA-------DGTRLAGYRKTHLFGCFERDHFTPG--EQPVVQAELNGLTVGLMICY 145 Query: 152 DIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ 211 D+ N+ H G + L A H +V + + + YV++VG + Sbjct: 146 DVEFPENVRAH-ALAGTDLLLVPTAQ--MHPFQFVAESVVPVRAFENQMYVAYVDRVGRE 202 Query: 212 DELIFDGAS 220 E F G S Sbjct: 203 GEFEFVGLS 211 >gi|114639047|ref|XP_001174134.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] gi|114639049|ref|XP_001174141.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] gi|114639051|ref|XP_001174146.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] Length = 592 Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust. Identities = 97/454 (21%), Positives = 161/454 (35%), Gaps = 133/454 (29%) Query: 138 IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 +V D +G ICE++W + + G E + + + S + K R ++VT S Sbjct: 49 LVTWDTCIGSEICEELWTPHSPHIDMGLDGVEIITNASGSHHVLRKANTRVDLVTMVTSK 108 Query: 198 VHLPIIYVNQVGGQ-DELIFDGAS--------------FCFDGQQQLAFQM--------- 233 + NQ G D L +DG + F D + L + Sbjct: 109 NGGIYLLANQKGCDGDRLYYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYR 168 Query: 234 KHFSEQN---------------FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEE 273 S +N F H D + +W Y S +EE Sbjct: 169 AEISSRNLAASRASPYPRVKVDFALSCHEDLLAPISEPIEWKYHSP----------EEEI 218 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI----------AVDALGKE---N 320 + AC L D+++++ ++ LSGG+DSA A + AV + +E + Sbjct: 219 SLGPACWL--WDFLRRSQQAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLAD 276 Query: 321 VQTIMLPYKYTSPQSLEDAAA-----------------CAKA------LGCKYDVLPIHD 357 V+TI+ YT PQ D C +A +G + L I Sbjct: 277 VRTIVNQISYT-PQDPRDLCGRILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDP 335 Query: 358 LVNHFFSLMSQFLQEEP----------SGIVAENIQSRIRGNI--------LMALSNHSK 399 V + S + P + +N+Q+RIR + L + H Sbjct: 336 AVKAVMGIFSLVTGKSPLFAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGVHGG 395 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT----------QVFQLASWRNSHGI 449 ++L ++N E +GY T Y S NP+ + KT Q FQL + ++ Sbjct: 396 LLVLGSANVDESLLGYLTKYDCSSADINPIGGISKTDLRVFVQFCIQRFQLPALQSI--- 452 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 ++ P+ E P A+ + QTD+E + Sbjct: 453 ---------LLAPATAELEPLADGQVSQTDEEDM 477 >gi|304314148|ref|YP_003849295.1| hydrolase [Methanothermobacter marburgensis str. Marburg] gi|302587607|gb|ADL57982.1| predicted hydrolase [Methanothermobacter marburgensis str. Marburg] Length = 247 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 16/170 (9%) Query: 37 GMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEG 95 G +L++ E+F Y E +F + I + S + G +V G P + EG Sbjct: 4 GAELMVLPEMFTCPYDSE--LFPEYAEDENGETITAMSSVAAELGVHLVAGSIPERTPEG 61 Query: 96 VLNSVVILDAGNIIAVRDK------INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILI 149 + N+ I+D G + R + I++ F E T I+G S +G+ I Sbjct: 62 IYNTSFIIDDGGEVVARHRKVHLFDIDVEGEITFRESDTLIAGSSVTVTETGSAVIGVGI 121 Query: 150 CEDIWKNSNICKHLKKQGAEFL-----FSLNASPYYHNKLKKRHEIVTGQ 194 C D+ + + + + GAE L F++ P H +L R + Q Sbjct: 122 CYDM-RFPELSRMMALGGAEVLIFPGAFNMTTGP-AHWRLLVRSRALDNQ 169 >gi|148377683|ref|YP_001256559.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Mycoplasma agalactiae PG2] gi|205816906|sp|A5IYK6|MNMA_MYCAP RecName: Full=tRNA-specific 2-thiouridylase mnmA gi|148291729|emb|CAL59115.1| TRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase [Mycoplasma agalactiae PG2] Length = 374 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 28/108 (25%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAV--------------------DALGKENVQTIMLPYK 329 +N KVI+G+SGG+DS++CA + + D LG EN+ + P Sbjct: 2 SNKKKVILGMSGGVDSSVCAYLLLKQGYEVEGLFMRNWDSMLNNDFLGNENISQDICP-- 59 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS-LMSQFLQEEPSG 376 Q +DA A LG K L D VN +++ + F+ E +G Sbjct: 60 --QEQDYQDALEVANKLGIK---LHRVDFVNEYWNDVFKTFISEYEAG 102 >gi|21219957|ref|NP_625736.1| hydrolase [Streptomyces coelicolor A3(2)] gi|7209215|emb|CAB76877.1| putative hydrolase [Streptomyces coelicolor A3(2)] Length = 262 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 21/189 (11%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS 99 L++ +ELF++GY D V + +A + G A + G+P +D E V NS Sbjct: 36 LLVTSELFLTGYAIGDAVGVLAEPADGDAADAVAEIAGRHGLA-VAYGYPERDGERVFNS 94 Query: 100 VVILDAGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIV---FRDIRLGILICE 151 V ++ A D L Y + H E+ F G P+V + +G++IC Sbjct: 95 VQLIAA-------DGTRLAGYRKTHLFGCFERDHFTPG--EQPVVQAELNGLTVGLMICY 145 Query: 152 DIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ 211 D+ N+ H G + L A H +V + + + YV++VG + Sbjct: 146 DVEFPENVRAH-ALAGTDLLLVPTAQ--MHPFQFVAESVVPVRAFENQMYVAYVDRVGRE 202 Query: 212 DELIFDGAS 220 E F G S Sbjct: 203 GEFEFVGLS 211 >gi|219682104|ref|YP_002468488.1| NAD(+) synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254766708|sp|B8D778|NADE_BUCAT RecName: Full=NH(3)-dependent NAD(+) synthetase gi|219621837|gb|ACL29993.1| NAD(+) synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 268 Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 40/237 (16%) Query: 273 EADYNACVLSLRDYVQKNNFH--KVIIGLSGGIDSALCAAIA---VDALGKENVQTIMLP 327 E + CV L+ Y+ N+ H +I+G+SGG DS L A + + L KE + Sbjct: 20 EIEIKNCVDFLKKYLV-NHVHIKSLIVGVSGGQDSTLTAKLCQMTAETLRKEKND---IT 75 Query: 328 YKYTS---PQSLE-DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-- 380 Y++ + P ++ D C A+ + P VN +++S + SG++ Sbjct: 76 YQFIALRLPYGIQYDEKDCQDAIRF---IQPDQIFNVNIKKAVLSSEKSLKKSGVIISDY 132 Query: 381 ---NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 N ++R R + +++ + +++ T + +E G+ T YGD NP+ L K Q+ Sbjct: 133 VRGNEKARERMKVQYSVAAMKQGLVVGTGHAAENITGFFTKYGDSGTDINPIAKLNKRQI 192 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESL-PPYPILD 490 L N P + K P A+L P Q D+ L Y ++D Sbjct: 193 RLLLKNLNC--------------PKHLYLKKPMADLEDEHPQQDDESVLGVTYDVID 235 >gi|222102845|ref|YP_002539884.1| amidohydrolase [Agrobacterium vitis S4] gi|221739446|gb|ACM40179.1| amidohydrolase [Agrobacterium vitis S4] Length = 347 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 33/216 (15%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------- 52 + ++ A AQ+ P + +A+ EA +G +LI+F E F+ YP Sbjct: 5 RTVRAAAAQIAPDLTSRDKTLARVLETIREAAGKGAELIVFPETFVPWYPYFSFVLPPVL 64 Query: 53 --PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 E L + S + + + + G + +G +D + N+ ++ DA G ++ Sbjct: 65 SGREHLRLYDEAVTIPSVTTEAVAAAAREHGIVVALGINERDHGTLYNTQLVFDADGELV 124 Query: 110 AVRDKINLPNYSEFHEKRTFISG-YSNDPIVFRDI-RLGILICEDIWKNSN-------IC 160 R KI FHE+ + G S +V I R+G L C W++ N + Sbjct: 125 LNRRKIT----PTFHERMIWGQGDASGLKVVDSKIGRIGALAC---WEHYNPLARYALMA 177 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLK---KRHEIVTG 193 +H + A+F S+ P + ++++ + H + +G Sbjct: 178 QHEEIHVAQFPGSM-VGPIFADQMEVTIRHHALESG 212 >gi|158338517|ref|YP_001519694.1| hypothetical protein AM1_5419 [Acaryochloris marina MBIC11017] gi|158308758|gb|ABW30375.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 274 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 + +I SGGIDS L A +A D LG + + I P+ EDA A +G + Sbjct: 16 QMERALIAYSGGIDSTLVAKVAFDVLGYKAL-AITANSPSLLPEDFEDAQVQAADIGISH 74 Query: 351 DVLPIHDLVN 360 +V+ H++ N Sbjct: 75 EVVATHEMDN 84 >gi|171909534|ref|ZP_02925004.1| putative amidohydrolase [Verrucomicrobium spinosum DSM 4136] Length = 349 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 33/214 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ A Q+ P + + G + + RA EA G++L +F E F+ YP Sbjct: 2 IRAAAVQIAPDLTSVEGTVDRVCRAVAEAAAGGVELAVFPETFVPYYPYFSFVEPPVSAG 61 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 E L ++ ++ D L G +VVG +D + N+ ++ DA G ++ Sbjct: 62 REHLRLYENAVEVPGWIPDILSQQARRHGMVLVVGVNERDHGSLYNTQLVFDADGTLVLK 121 Query: 112 RDKINLPNYSEFHEKRTFISG-YSNDPIVFRDI-RLGILICEDIWKNSN-------ICKH 162 R KI P Y HE+ + G S +V + RLG L C W++ N + +H Sbjct: 122 RRKIT-PTY---HERMIWGQGDGSGLKVVETKVGRLGALAC---WEHYNPLARFSLMAQH 174 Query: 163 LKKQGAEFLFSLNASPYYHNKLK---KRHEIVTG 193 + A+F S+ P + ++++ + H + +G Sbjct: 175 EQIHCAQFPGSM-VGPIFRDQIEVTIRHHALESG 207 >gi|121634320|ref|YP_974565.1| hypothetical protein NMC0464 [Neisseria meningitidis FAM18] gi|167016439|sp|A1KSD4|QUEC_NEIMF RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|120866026|emb|CAM09764.1| hypothetical protein NMC0464 [Neisseria meningitidis FAM18] gi|254669985|emb|CBA04680.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|308388708|gb|ADO31028.1| putative aluminum resistance protein [Neisseria meningitidis alpha710] gi|325127641|gb|EGC50557.1| exsB protein [Neisseria meningitidis N1568] gi|325131675|gb|EGC54380.1| exsB protein [Neisseria meningitidis M6190] gi|325137691|gb|EGC60268.1| exsB protein [Neisseria meningitidis ES14902] Length = 219 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 13/94 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERARWIAQDLGVKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI-VAEN 381 L + SLM Q L ++ + I AEN Sbjct: 64 LDL--------SLMRQITHNALMDDTAAIETAEN 89 >gi|116203267|ref|XP_001227445.1| hypothetical protein CHGG_09518 [Chaetomium globosum CBS 148.51] gi|88178036|gb|EAQ85504.1| hypothetical protein CHGG_09518 [Chaetomium globosum CBS 148.51] Length = 341 Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 27/51 (52%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 L K K+A A PV + A KA R EEA + +++F E FI GYP Sbjct: 5 LTKFKVAAAHAAPVFMNKAATTKKAIRLIEEAGAAAVKVLVFPETFIPGYP 55 >gi|40890235|gb|AAR97462.1| nitrilase [uncultured organism] Length = 337 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 64/164 (39%), Gaps = 24/164 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLVFK 59 K+A+ Q PV ++ + K R EEA + G LI F E +I GYP Sbjct: 9 KVAVVQAAPVWLNLEATVEKTIRYIEEAAKAGAKLIAFPETWIPGYPWHIWIGTPAWAIG 68 Query: 60 KSFIQAC---SSAIDT-LKSDTHDGGA----GIVVGFPRQDQEGV-LNSVVILDAGNIIA 110 K F+Q S + D+ L D A +V+G +D + + +I G IA Sbjct: 69 KGFVQRYFDNSLSYDSPLARQIADAAAKSKITVVLGLSERDGGSLYIAQWLIGPDGETIA 128 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI----RLGILIC 150 R K+ H +RT I D RLG L C Sbjct: 129 KRRKLR-----PTHVERTVFGDGDGSHIAVHDRSDLGRLGALCC 167 >gi|330989327|gb|EGH87430.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 246 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 47/229 (20%), Positives = 93/229 (40%), Gaps = 17/229 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ GDI N+A + A G +LF EL ++GY P+ + + + A Sbjct: 6 LAVAQFCSARGDIEQNLAGHLAFMQRAADLGASYLLFPELSLTGYEPD--LARALALHAD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN-YSEFHE 125 + ++ +K+ +G P + N +++ A A D Y E Sbjct: 64 DARLEPIKALAMKLRLVTTIGVPLKGA----NDSILIGALTFTADGDVTTYAKQYLHPGE 119 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 + F +G + + ++G+ +C D + +++ + + + S+ SP Sbjct: 120 DKVFSAGDKDCYLPIDQQQIGLCVCADFTQPAHVQRMAEGGAWVYAASVLISP---GGYA 176 Query: 186 KRHEIVTGQISHVHLPIIYVNQ---VGGQDEL----IFDGASFCFDGQQ 227 + E++ G +LP++ N GG + ++DGA G Q Sbjct: 177 QDAELLAGHARRHNLPVLVANHGAPTGGWESAGRSGLWDGAGRWIGGMQ 225 >gi|315231495|ref|YP_004071931.1| aliphatic amidase amiE [Thermococcus barophilus MP] gi|315184523|gb|ADT84708.1| aliphatic amidase amiE [Thermococcus barophilus MP] Length = 264 Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ Q+ P + D+ N++KA + ++A +Q L++ ELF +GY E S Q Sbjct: 1 MRVGFIQMEPKLLDLNANLSKAEKLLKDAAKQEAQLVVLPELFDTGYNFESREEVYSIAQ 60 Query: 65 ACSSAIDT--LKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILD--AGNIIAVRDKINLPN 119 T L + I+ G +D++G L NS V++ I KI+L Sbjct: 61 QIPDGETTQFLVEQAREHEMFIIAGTAEKDEKGRLYNSAVLVGPIGWGYIGKYRKIHL-- 118 Query: 120 YSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F+ ++ F + VF ++GI+IC D W + L +GA+ + Sbjct: 119 ---FYREKLFFEPGNLGFHVFNIGVAKVGIMICFD-WFFPEAMRTLALKGADIV 168 >gi|317053507|ref|YP_004118641.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pantoea sp. At-9b] gi|316952612|gb|ADU72085.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pantoea sp. At-9b] Length = 315 Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 28/51 (54%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KK+++A Q PV D+ G KA EA R+G +LI F E FI +P Sbjct: 9 FKKIRVAGVQAAPVFLDLNGTTEKACELILEAGRKGAELIAFPEAFIPTFP 59 >gi|51701632|sp|P82605|NRL_BACSX RecName: Full=Nitrilase gi|6855268|dbj|BAA90460.1| nitrilase [Bacillus sp. OxB-1] Length = 339 Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K ++A Q +PV+ D+ I K R +EA G +I F E FI GYP Sbjct: 6 KYRVAAVQASPVLLDLDATIDKTCRLVDEAAANGAKVIAFPEAFIPGYP 54 >gi|315657479|ref|ZP_07910361.1| NAD synthetase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491951|gb|EFU81560.1| NAD synthetase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 703 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 50/171 (29%) Query: 294 KVIIGLSGGIDSALCAAIAV------------------------------------DALG 317 +I+G+SGG+DS L +A D+ G Sbjct: 327 NIILGISGGLDSTLALLVATAARDSALAHESGRQTAEPNRKSNDLLSPAEHLENTRDSAG 386 Query: 318 -KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 K + T LP TS + +A A A+G +++ I M P+G Sbjct: 387 CKPEILTFTLPGFATSAHTKSNAQKLAAAVGVNCELIDIRPAATEMLKTMGH-----PAG 441 Query: 377 -------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + EN+Q+ +R + L L+N +L T + SE ++G+ T YG Sbjct: 442 HGEPIYDVTFENVQAGLRSDYLFRLANQRHGFVLGTGDLSESALGW-TTYG 491 >gi|289672622|ref|ZP_06493512.1| NAD synthetase [Pseudomonas syringae pv. syringae FF5] Length = 275 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 +++ +Q +++G+SGG+DS +A A+ + T + LPY + Sbjct: 35 IKECLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRESTGDNAYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPATSVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ + +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYQGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|305666249|ref|YP_003862536.1| carbon-nitrogen family hydrolase [Maribacter sp. HTCC2170] gi|88708240|gb|EAR00477.1| hydrolase, carbon-nitrogen family protein [Maribacter sp. HTCC2170] Length = 316 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 29/48 (60%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 LK+A+AQ+ PV + + I K A +EA + DLI+F E + GYP Sbjct: 5 LKVALAQIAPVWLNKSATIEKIESAIKEAASENADLIVFGEALLPGYP 52 >gi|116618635|ref|YP_819006.1| NAD synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097482|gb|ABJ62633.1| NH(3)-dependent NAD(+) synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 273 Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust. Identities = 57/267 (21%), Positives = 108/267 (40%), Gaps = 47/267 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT------IMLPYKYTSPQSL 336 L+ Y+ + + + I +SGG DS L I A+ + +T + + Y Q Sbjct: 31 LKQYLTHSAYTGLAIAVSGGQDSTLAGKIGQLAIAELRAETNQKFEFVAIRQPYGEQQDE 90 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN-----IQSRIRGNIL 391 DA + K D+ ++ + +L+ G+ ++ I+ ++R Sbjct: 91 NDAQDALNFI--KPDLTVTTNIKDATDALVGSL---RLGGLTVDDMSRGSIKPKVRMIAQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ + ++ T + +E G+ T YGD NPL L K Q QL ++ Sbjct: 146 YAVAREHNSAVIGTDHAAEAVAGFFTKYGDGGTDINPLWRLNKRQGRQLLEALHA----- 200 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINND 507 P + +K P+A+L RP D+ +L Y ++DD ++ + N D Sbjct: 201 ---------PKHLYDKVPTADLEDERPQLPDEVALGVRYDVIDDYLE-----GKDVANTD 246 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPV 534 E +E +Y + ++R P+ Sbjct: 247 AERIEE--------MYLTTQQKRHEPI 265 >gi|297155749|gb|ADI05461.1| putative hydrolase [Streptomyces bingchenggensis BCW-1] Length = 274 Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust. Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 21/236 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+IA+ Q + G+ A N+ A A G L++ ELF++GY D V + + Sbjct: 1 MPPLRIALLQSSGHPGETAQNLKALDEAAGRAAAAGAGLLIAPELFLTGYAIGDGVRRLA 60 Query: 62 FIQACSSAIDTLK-SDTHDGGAGIVVGFPRQ---DQEGVLNSVVILDAGNIIAVRDKINL 117 + + TH G ++ G+P + + I ++ ++ D L Sbjct: 61 EPADGPGGRAVARIAATH--GLAVLYGYPERAGDAGGTGGDGGAIFNSARLVG-PDGAEL 117 Query: 118 PNYSEFH-----EKRTFISGYSNDPIV---FRDIRLGILICEDIWKNSNICKHLKKQGAE 169 NY + H E+ F G + P+V +RLG++IC D+ N+ H G + Sbjct: 118 ANYRKTHLFGDFERAWFTPG--DTPVVQAELGGVRLGVMICYDVEFPENVRAH-ALAGTD 174 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 L A H +V + L I YVN+ G + + F G S C G Sbjct: 175 LLLVPTAQ--MHPFQFVAEALVPVRAFESQLYIAYVNRTGPEGDFDFVGLS-CLAG 227 >gi|260769954|ref|ZP_05878887.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vibrio furnissii CIP 102972] gi|260615292|gb|EEX40478.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Vibrio furnissii CIP 102972] Length = 321 Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 23/163 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY------PPED 55 +K +++A Q N D N++ + E+A R+ + +I+F E+ I+GY D Sbjct: 1 MKDIRVASVQFNHRANDKVYNLSIIEQYVEQAAREHVAIIVFPEMCITGYWHVSTLTKSD 60 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 +V +I ++ L + + I G QD G L + ++ A+ D Sbjct: 61 IVALAEYIPHGETS-QALLAMSMKHNISIGAGLIEQDAMGNLYNAYVM------AMPDG- 112 Query: 116 NLPNYSEFHEKRTFISGY---SNDPIVF---RDIRLGILICED 152 N+ + + H TFIS + N+ VF RLGILIC D Sbjct: 113 NIATHRKLH---TFISQHMTSGNEYTVFDTPHGCRLGILICWD 152 >gi|145641208|ref|ZP_01796788.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021] gi|260582121|ref|ZP_05849915.1| queuosine biosynthesis protein queC [Haemophilus influenzae NT127] gi|145274045|gb|EDK13911.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 22.4-21] gi|260094753|gb|EEW78647.1| queuosine biosynthesis protein queC [Haemophilus influenzae NT127] Length = 227 Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 30/60 (50%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKEN++ I Y LE A A A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQDLGIK 66 >gi|319897342|ref|YP_004135538.1| pp-loop superfamily atpase [Haemophilus influenzae F3031] gi|317432847|emb|CBY81212.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae F3031] Length = 227 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 30/60 (50%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKEN++ I Y LE A A A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQDLGIK 66 >gi|299143356|ref|ZP_07036436.1| nitrilase 4 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517841|gb|EFI41580.1| nitrilase 4 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 307 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 28/47 (59%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIA+ Q P + D + KA + EEA ++ + ++F ELFI GYP Sbjct: 9 KIAVVQAEPALFDKNACLDKAVKLIEEAAKKEAEFVVFPELFIPGYP 55 >gi|238506655|ref|XP_002384529.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] gi|220689242|gb|EED45593.1| conserved hypothetical protein [Aspergillus flavus NRRL3357] Length = 287 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 18/180 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ QL+P DI N A+A+ ++A++ G DL + E ++ + P + + Sbjct: 2 VKIALIQLHPEPHDIENNHARAKAYIQKASQAGADLAVLPEFHLADFHPTHDTTIRQRCK 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF-------PRQDQEGVLNSVVILD-AGNIIAVRDKIN 116 S+ + + K + IV G P +E +LN +D G I +K N Sbjct: 62 NYSTHLTSYKPLAKECNINIVPGSIAELHTDPTTGEEKLLNVTYFIDNTGEIRGRYEKRN 121 Query: 117 LPNYSEFHEKRTFIS-GYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLF 172 L + +R F+ G ++ V D ++G+LIC D+ + L QGA+ + Sbjct: 122 L-----WIPERQFVDRGATDSGHVAFDTPLGKVGLLICWDL-AFPEAFRELVMQGAKMVI 175 >gi|317158829|ref|XP_001827337.2| hydrolase, carbon-nitrogen family protein [Aspergillus oryzae RIB40] Length = 287 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 18/180 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ QL+P DI N A+A+ ++A++ G DL + E ++ + P + + Sbjct: 2 VKIALIQLHPEPHDIENNHARAKAYIQKASQAGADLAVLPEFHLADFHPTHDTTIRQRCK 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF-------PRQDQEGVLNSVVILD-AGNIIAVRDKIN 116 S+ + + ++ + IV G P +E +LN +D G I +K N Sbjct: 62 NYSTHLTSYRTLAKECNINIVPGSIAELHTDPTTGEEKLLNVTYFIDNTGEIRGRYEKRN 121 Query: 117 LPNYSEFHEKRTFIS-GYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLF 172 L + +R F+ G ++ V D ++G+LIC D+ + L QGA+ + Sbjct: 122 L-----WIPERQFVDRGATDSGHVAFDTPLGKVGLLICWDL-AFPEAFRELVMQGAKMII 175 >gi|301169929|emb|CBW29533.1| predicted aluminum resistance protein [Haemophilus influenzae 10810] Length = 227 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 32/64 (50%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKEN++ I Y LE A A A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQDLGIK 66 Query: 350 YDVL 353 ++ Sbjct: 67 QTLI 70 >gi|269795714|ref|YP_003315169.1| amidohydrolase [Sanguibacter keddieii DSM 10542] gi|269097899|gb|ACZ22335.1| predicted amidohydrolase [Sanguibacter keddieii DSM 10542] Length = 282 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 16/230 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVFKKSF 62 ++ A+ Q GD +AK + +A QG +I + ELF Y +D + + Sbjct: 4 VRTALTQAT-WTGDKESMLAKHEQFTRDAAAQGAKIICYQELFYGPYFGIVQDTKYYEYA 62 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNY 120 + ++ + IV+ +DQ GVL N+ ++D+ G+ + K ++P+ Sbjct: 63 ESVPGPITERFQALAKELDIVIVLPVYEEDQPGVLYNTAAVIDSDGSYLGKYRKHHIPHL 122 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS-P 178 +F EK F G P+ + ++G+ IC D + L GA+ +F+ NA+ P Sbjct: 123 PKFWEKFYFRPGNLGYPVFDTAVGKIGVNICYDR-HFPEGWRALALNGAQIVFNPNATAP 181 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVG------GQDELIFDGASFC 222 N+L + + + + ++ N+VG G + + F G+S+ Sbjct: 182 GISNRLWEIEQPAAAVANGMF--VVATNRVGLEDNEYGDEAVNFYGSSYV 229 >gi|255528397|ref|ZP_05395198.1| PP-loop domain protein [Clostridium carboxidivorans P7] gi|296186775|ref|ZP_06855177.1| hypothetical protein CLCAR_2240 [Clostridium carboxidivorans P7] gi|255507916|gb|EET84355.1| PP-loop domain protein [Clostridium carboxidivorans P7] gi|296048812|gb|EFG88244.1| hypothetical protein CLCAR_2240 [Clostridium carboxidivorans P7] Length = 267 Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV++ SGG+DS + +ALG +NV+ + + Y +E+A K LG K++++ Sbjct: 19 KVVLAFSGGVDSTFLLKASKEALG-DNVKAVTILSPYIPKWEIEEAKELVKELGVKHEII 77 Query: 354 --PIHDLVNH 361 PI D + + Sbjct: 78 EAPIIDSIRY 87 >gi|325291197|ref|YP_004267378.1| exsB protein [Syntrophobotulus glycolicus DSM 8271] gi|324966598|gb|ADY57377.1| exsB protein [Syntrophobotulus glycolicus DSM 8271] Length = 231 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 30/55 (54%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 K ++ LSGG+DS +CA +A G ENV + L Y + ++ A A + LG Sbjct: 5 RKAVVLLSGGLDSTICAVLACREFGAENVIALTLFYGQKHAREIKSAEAVCEHLG 59 >gi|283853758|ref|ZP_06370984.1| ExsB family protein [Desulfovibrio sp. FW1012B] gi|283570852|gb|EFC18886.1| ExsB family protein [Desulfovibrio sp. FW1012B] Length = 272 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++ SGG DS L +DAL ENV + L YT + A AK++G +++V+ Sbjct: 19 VLVAFSGGTDSTLVLRAVLDALPGENVLAVTLAAPYTPAFEVAAAREAAKSMGARHEVVA 78 Query: 355 I 355 + Sbjct: 79 V 79 >gi|152965403|ref|YP_001361187.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Kineococcus radiotolerans SRS30216] gi|151359920|gb|ABS02923.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Kineococcus radiotolerans SRS30216] Length = 250 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 28/179 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ D+A N+A R A R G DL++ ELF +GY P + Sbjct: 1 MRIAVAQ-QAATADVAQNLAVLERVAAAAARAGADLLVTPELFTTGYDP-------GRVH 52 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + G +VV P EG + +VV+ RD L Y + H Sbjct: 53 PDPTVLPRVADLARRSGLALVVSEP---HEGAITAVVVD--------RDGTVLGRYVKTH 101 Query: 125 -----EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 E+ F G P+V +R+G+L+C D+ + + L GA+ + A Sbjct: 102 LYGPAERAAFRPG-DGTPLVVEVAGLRVGVLVCFDVEFPETV-RGLALAGADVVVVPTA 158 >gi|114639053|ref|XP_508616.2| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes] Length = 594 Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust. Identities = 97/454 (21%), Positives = 161/454 (35%), Gaps = 133/454 (29%) Query: 138 IVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 +V D +G ICE++W + + G E + + + S + K R ++VT S Sbjct: 49 LVTWDTCIGSEICEELWTPHSPHIDMGLDGVEIITNASGSHHVLRKANTRVDLVTMVTSK 108 Query: 198 VHLPIIYVNQVGGQ-DELIFDGAS--------------FCFDGQQQLAFQM--------- 233 + NQ G D L +DG + F D + L + Sbjct: 109 NGGIYLLANQKGCDGDRLYYDGCAMIAMNGSVFAQGSQFSLDDVEVLTATLDLEDVRSYR 168 Query: 234 KHFSEQN---------------FMTEWHYD-----QQLSQWNYMSDDSASTMYIPLQEEE 273 S +N F H D + +W Y S +EE Sbjct: 169 AEISSRNLAASRASPYPRVKVDFALSCHEDLLAPISEPIEWKYHSP----------EEEI 218 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI----------AVDALGKE---N 320 + AC L D+++++ ++ LSGG+DSA A + AV + +E + Sbjct: 219 SLGPACWL--WDFLRRSQQAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLAD 276 Query: 321 VQTIMLPYKYTSPQSLEDAAA-----------------CAKA------LGCKYDVLPIHD 357 V+TI+ YT PQ D C +A +G + L I Sbjct: 277 VRTIVNQISYT-PQDPRDLCGRILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDP 335 Query: 358 LVNHFFSLMSQFLQEEP----------SGIVAENIQSRIRGNI--------LMALSNHSK 399 V + S + P + +N+Q+RIR + L + H Sbjct: 336 AVKAVMGIFSLVTGKSPLFAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGVHGG 395 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT----------QVFQLASWRNSHGI 449 ++L ++N E +GY T Y S NP+ + KT Q FQL + ++ Sbjct: 396 LLVLGSANVDESLLGYLTKYDCSSADINPIGGISKTDLRVFVQFCIQRFQLPALQSI--- 452 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 ++ P+ E P A+ + QTD+E + Sbjct: 453 ---------LLAPATAELEPLADGQVSQTDEEDM 477 >gi|313205276|ref|YP_004043933.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paludibacter propionicigenes WB4] gi|312444592|gb|ADQ80948.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Paludibacter propionicigenes WB4] Length = 292 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 23/244 (9%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGY---PPEDLVFKKSFIQACSSAIDTLKSDTH 78 NIAK + QG +LI+ EL Y + +VF+++ S + + Sbjct: 17 NIAKLEKNIRTCASQGAELIVLQELHNGLYFCQTEDPVVFEQAETIPGPSTV-SFGKLAK 75 Query: 79 DGGAGIVVGFPRQDQEGVLN--SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISG-YSN 135 + G IV+ + G+ + +VVI G I K+++P+ ++EK F G Sbjct: 76 ELGVVIVLSLFEKRAAGLHHNTAVVIEKDGTIAGKYRKMHIPDDPAYYEKFYFTPGDLGF 135 Query: 136 DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN-----KLKKRHEI 190 +P+ +LG+L+C D W + + GAE L A + K ++ Sbjct: 136 EPVQTSVGKLGVLVCWDQWY-PEAARLMALAGAEVLIYPTAIGWESTDNDDEKQRQTDAW 194 Query: 191 VTGQISHV---HLPIIYVNQVGGQDE-------LIFDGASFCFDGQQQLAFQMKHFSEQN 240 + Q +H L +I N+ G + + + F G SF Q ++ Q + ++N Sbjct: 195 IISQRAHAVANGLHVISCNRTGYEPDPSGVTNGIQFWGNSFVAGPQGEIITQAANDKDEN 254 Query: 241 FMTE 244 + E Sbjct: 255 LIVE 258 >gi|300773358|ref|ZP_07083227.1| carbon-nitrogen family hydrolase [Sphingobacterium spiritivorum ATCC 33861] gi|300759529|gb|EFK56356.1| carbon-nitrogen family hydrolase [Sphingobacterium spiritivorum ATCC 33861] Length = 318 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 28/50 (56%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY 51 + KLKIA AQ D A N+A R +EA QG D+I F E I+GY Sbjct: 1 MDKLKIATAQFEHKSADKAYNLAVIERLAKEAASQGADVIAFHECSITGY 50 >gi|240169863|ref|ZP_04748522.1| putative hydrolase [Mycobacterium kansasii ATCC 12478] Length = 276 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 9/171 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+ D A N+ R A G +L++F E + + + Sbjct: 1 MRIALAQILSGT-DPAANLLLVREYTGRAADAGAELVVFPEATMCRFGVPLAPIAEPLDG 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNI---IAVRDKINLPNY 120 +S + + ++ G +V G F D V+N++V G A KI+L + Sbjct: 60 PWASGVRRIATEA---GITVVAGMFTPADAGRVMNTLVAAGPGRPNQPDAHYHKIHLYDA 116 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 F E RT G+ I D+R+G+ +C DI + + L ++GA + Sbjct: 117 FGFTESRTVAPGHEPVVITVNDVRVGLTVCYDI-RFPELYTELARRGASLI 166 >gi|302775015|ref|XP_002970924.1| hypothetical protein SELMODRAFT_171766 [Selaginella moellendorffii] gi|300161635|gb|EFJ28250.1| hypothetical protein SELMODRAFT_171766 [Selaginella moellendorffii] Length = 354 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 31/212 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ ++ Q + + GD IAKA + A G L++F E F+ GYP Sbjct: 25 VRASVVQASTIYGDTPATIAKAEKLIAAAATLGSQLVVFPEAFLGGYPRGSTFGTAVGYR 84 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN 107 E + I +D L + +V+G + + S++ D+ Sbjct: 85 SSQGREEFRRYHSCAIDVPGPEVDLLAAAAAKFRVNLVMGVIERSGGTLYCSILFFDSQG 144 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGY---SNDPIVFRDI-RLGILICEDIWKNSN--ICK 161 + + + +P +E I GY S P+ ++ R+G L+C W+N + Sbjct: 145 VFLGKHRKCVPTAAE-----RLIFGYGDGSTLPVYKTELGRVGGLVC---WENRMPLLRT 196 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTG 193 L +G EF + A + RH V G Sbjct: 197 ALYAKGVEFYCAPTADSRETWQATIRHIAVEG 228 >gi|293571435|ref|ZP_06682462.1| NAD synthetase [Enterococcus faecium E980] gi|291608440|gb|EFF37735.1| NAD synthetase [Enterococcus faecium E980] Length = 274 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 33/216 (15%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIA-------VDALGKENVQTIMLPYKYTSPQ 334 ++ Y++K F K ++G+SGG DS L +A + E+ Q I + Y Sbjct: 30 MKAYLKKYPFLKTFVLGISGGQDSTLAGRLAQLTMEEMREETKDESYQFIAVRLPYGEQA 89 Query: 335 SLEDAAAC----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 EDA A + + ++ P D S + + G NI++R R Sbjct: 90 DEEDAKAALDFIQPDVSLRVNIKPAVDAQVQVLSEAGVVISDFNKG----NIKARQRMIT 145 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +L T + +E G+ T +GD PL L K Q QL N+ Sbjct: 146 QYAVAGERAGAVLGTDHAAENITGFFTKFGDGGADILPLFRLNKRQGKQLLQALNA---- 201 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 P + K P+A+L +P D+ +L Sbjct: 202 ----------PEKLYTKIPTADLEDGKPMIADEVAL 227 >gi|75911257|ref|YP_325553.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Anabaena variabilis ATCC 29413] gi|75704982|gb|ABA24658.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Anabaena variabilis ATCC 29413] Length = 271 Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 10/166 (6%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLK 74 V D+ N+A+A + A R+G +L+ E F G + L ++ + I T+ Sbjct: 14 VPDLHKNLAQAEELIDLAVRRGAELVGLPENFSFMGEEQDKLAQAEAIARESEIFIKTMA 73 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDK-----INLPNYSEFHEKRT 128 G P D V N+ +++ +G +A +K +N+P+ + + E T Sbjct: 74 QRYQVTLLGGSFPVPVSDTGRVYNTTILVSPSGEELARYNKVHLFDVNVPDGNTYRESST 133 Query: 129 FISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLF 172 ++G P+ F + +G+ IC D+ + + +HL +G + +F Sbjct: 134 VVAGQQLPPVHFSENLGNIGVSICYDV-RFPELYRHLSDKGTDIIF 178 >gi|325203616|gb|ADY99069.1| exsB protein [Neisseria meningitidis M01-240355] Length = 219 Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 13/94 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERARWIAQDLGVKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI-VAEN 381 L + SLM Q L ++ + I AEN Sbjct: 64 LDL--------SLMRQITHNALMDDTAAIETAEN 89 >gi|330923460|ref|XP_003300252.1| hypothetical protein PTT_11435 [Pyrenophora teres f. teres 0-1] gi|311325723|gb|EFQ91658.1| hypothetical protein PTT_11435 [Pyrenophora teres f. teres 0-1] Length = 347 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 18/136 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF----- 58 K K+A A PV D A I K + E+A + + L++F E FI GYP + Sbjct: 7 KFKVAAAHAAPVFMDKAATIKKTIQLIEQAAKDDIKLLVFPETFIPGYPYWTEAYPPLKQ 66 Query: 59 ---------KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDA-G 106 + ++ + ++ G I +G + G + NS VI+D+ G Sbjct: 67 VAALAKYAEESVVVEPNGEDVSAIQDACRRTGIAINLGISERIANGHTLFNSQVIIDSDG 126 Query: 107 NIIAVRDKINLPNYSE 122 I+ V K+ P + E Sbjct: 127 TILGVHRKLQ-PTFVE 141 >gi|240015885|ref|ZP_04722425.1| YbaX [Neisseria gonorrhoeae FA6140] gi|240117262|ref|ZP_04731324.1| YbaX [Neisseria gonorrhoeae PID1] gi|268602958|ref|ZP_06137125.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID1] gi|268587089|gb|EEZ51765.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID1] Length = 219 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 30/63 (47%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLGVKQTV 63 Query: 353 LPI 355 L + Sbjct: 64 LDL 66 >gi|170077022|ref|YP_001733660.1| hypothetical protein SYNPCC7002_A0394 [Synechococcus sp. PCC 7002] gi|169884691|gb|ACA98404.1| conserved hypothetical protein, TIGR00268 [Synechococcus sp. PCC 7002] Length = 288 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + +I SGGIDS L A +A D LG V + P+ LE A A AK +G ++ Sbjct: 18 ERALIAYSGGIDSTLVAKVAHDVLGDRAVAVTAVSPSLL-PEELEAAIAQAKTIGIVHEQ 76 Query: 353 LPIHDLVN 360 + H++ N Sbjct: 77 VETHEMDN 84 >gi|15616793|ref|NP_240005.1| NAD synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681548|ref|YP_002467933.1| NAD(+) synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471231|ref|ZP_05635230.1| NAD synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11133464|sp|P57271|NADE_BUCAI RecName: Full=NH(3)-dependent NAD(+) synthetase gi|254766707|sp|B8D8X4|NADE_BUCA5 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|25299055|pir||C84950 NAD+ synthase (glutamine-hydrolyzing) (EC 6.3.5.1) [imported] - Buchnera sp. (strain APS) gi|10038856|dbj|BAB12891.1| nh(3)-dependent NAD(+) synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624391|gb|ACL30546.1| NAD(+) synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 268 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 39/229 (17%) Query: 273 EADYNACVLSLRDYVQKNNFH--KVIIGLSGGIDSALCAAIA---VDALGKENVQTIMLP 327 E + CV L+ Y+ N+ H +I+G+SGG DS L A + + L KE + Sbjct: 20 EIEIKNCVDFLKKYLV-NHVHIKSLIVGVSGGQDSTLTAKLCQMTAETLRKEKND---IT 75 Query: 328 YKYTS---PQSLE-DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-- 380 Y++ + P ++ D C A+ + P VN +++S + SG++ Sbjct: 76 YQFIALRLPYGIQYDEKDCQDAIRF---IQPDQIFNVNIKKAVLSSEKSLKKSGVIISDY 132 Query: 381 ---NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQV 437 N ++R R + +++ + +++ T + +E G+ T YGD NP+ L K Q+ Sbjct: 133 VRGNEKARERMKVQYSIAAMKQGLVVGTGHAAENITGFFTKYGDSGTDINPIAKLNKRQI 192 Query: 438 FQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESL 483 L N P + K P A+L P Q D+ L Sbjct: 193 RLLLKNLNC--------------PKHLYLKKPMADLEDEHPQQDDESVL 227 >gi|322514964|ref|ZP_08067977.1| transcription regulator ExsB [Actinobacillus ureae ATCC 25976] gi|322119072|gb|EFX91232.1| transcription regulator ExsB [Actinobacillus ureae ATCC 25976] Length = 222 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K ++ SGG DS C A+ G ENV+ + Y LE AA AK LG K Sbjct: 2 NSIPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLGVK 61 >gi|40890095|gb|AAR97392.1| nitrilase [uncultured organism] Length = 337 Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 27/52 (51%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 M + +K+A Q PV D+ + K EEA R G LI F E +I GYP Sbjct: 1 MKEAIKVACVQAAPVFLDLDATVDKTVALIEEAARNGARLIAFPETWIPGYP 52 >gi|332364592|gb|EGJ42361.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK1059] Length = 274 Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 38/240 (15%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT-------- 323 E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 20 EEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQMAVEEMRAETGDDSYRFI 79 Query: 324 -IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIV--- 378 + LPY Q+ ED A A A + DV L ++ + M++ ++ + + Sbjct: 80 AVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTKAVETTGAKVSDFN 133 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 NI++R R AL+ ++ T + +E + T +GD PL L K Q Sbjct: 134 KGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLNKRQGK 193 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 QL + LG P++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 194 QL---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEIDDYLE 239 >gi|327438514|dbj|BAK14879.1| NAD synthase [Solibacillus silvestris StLB046] Length = 276 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 48/250 (19%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKE---- 319 P + E + + L++Y + + F K ++G+SGG DS L A +A+D L +E Sbjct: 16 PTIDVEQEIRKSIDFLKEYAKYHPFLKGFVLGISGGQDSTLTGKLAQMAIDELNEEAGAS 75 Query: 320 --NVQTIMLPYKYTSPQSLEDAAACAKALG----CKYDVLPIHDLVNHFFSLMSQFLQEE 373 + + LPY D C AL K + I + V+ + + + Sbjct: 76 SYSFWAVRLPYGKQF-----DEKDCQDALDFIQPTKVYTVNIKNAVDASVNALLE----- 125 Query: 374 PSGIVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 +GI N ++R R + +++ + ++L T + +E G+ T YGD P Sbjct: 126 -AGITLSDFAKGNEKARERMKVQYSIAASNDGVVLGTDHAAEAVTGFYTKYGDGGADLMP 184 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP- 484 + L K R I L P + EK P+A+L RP D+ +L Sbjct: 185 IFRLNK---------RQGRAILKHLN-----CPVHLYEKVPTADLEENRPALPDEAALGV 230 Query: 485 PYPILDDIIK 494 Y +DD ++ Sbjct: 231 TYEQIDDYLE 240 >gi|302541066|ref|ZP_07293408.1| delta-aminovaleramide aminohydrolase [Streptomyces hygroscopicus ATCC 53653] gi|302458684|gb|EFL21777.1| delta-aminovaleramide aminohydrolase [Streptomyces himastatinicus ATCC 53653] Length = 265 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 26/234 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV--FK 59 + L+ A+ Q + GD A N+ A E A G L++ +E+F++GY D V Sbjct: 1 MPPLRTALLQSSGHPGDPARNLKALDAAAERAAADGAGLLVTSEMFLTGYAIGDGVHGLA 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + A+ + ++ G ++ G+P + + V NS ++ D L N Sbjct: 61 EPADGPSGRAVAEIAAEH---GIAVLYGYPERAGQAVHNSARLVGP-------DGAPLAN 110 Query: 120 YSEFH-----EKRTFISGYSNDPIV---FRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 Y + H E F G + P+V + +GI+IC D+ N+ H G + L Sbjct: 111 YRKTHLFGCFENDWFTPG--DTPVVQAELGGLTIGIMICYDVEFPENVRAH-ALAGTDLL 167 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 A H +V + + I YVN+ G + E F G S C G Sbjct: 168 LVPTAQ--MHPFQFVAESLVPVRAFESQMYIAYVNRSGPEGEFDFIGLS-CLAG 218 >gi|169629902|ref|YP_001703551.1| putative hydrolase [Mycobacterium abscessus ATCC 19977] gi|169241869|emb|CAM62897.1| Putative hydrolase [Mycobacterium abscessus] Length = 282 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 22/193 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ Q GD +AK R +A +G +I F ELF P +V K + Sbjct: 4 IRAALTQAT-WTGDKESMLAKHERFVAQAAARGAQVICFQELFYG--PYFGIVQDKKYYG 60 Query: 65 AC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLP 118 + + +V+ Q+Q GVL N+ ++D+ G + K ++P Sbjct: 61 YAEPVPGPVTERFAKLAREHRMVLVLPVYEQEQPGVLYNTAAVVDSDGRYLGKYRKHHIP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDI-----WKNSNICKHLKKQGAEFLF 172 + F EK F G P+ + ++G+ IC D W+N + GAE +F Sbjct: 121 HLDRFWEKFYFRPGNLGYPVFDTAVGKIGVYICYDRHFPEGWRNYGLA------GAELVF 174 Query: 173 SLNAS-PYYHNKL 184 + +A+ P N+L Sbjct: 175 NPSATKPGLSNRL 187 >gi|83951202|ref|ZP_00959935.1| hypothetical protein ISM_08870 [Roseovarius nubinhibens ISM] gi|83839101|gb|EAP78397.1| hypothetical protein ISM_08870 [Roseovarius nubinhibens ISM] Length = 264 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 17/180 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ---GMDLILFTELFISGYPPEDLVFKKS 61 +K+A+ Q++ A +ARR E R G DL++ EL +SGY D + Sbjct: 1 MKLALYQMS----ATANPTPRARRISEALTRASAAGADLMVAPELALSGYGAGD-ALRDL 55 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A L+ G +V GFP + + + S + L G + K L Y Sbjct: 56 AQPAEGQWCQHLQEVVEASGCALVTGFPERLGDTLHISAMALRPGRPPVIYRKGFL--YG 113 Query: 122 EFHEKRTFISGYSNDPIV---FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 ++ EK F N +V + +++G+LIC D+ + + L GAE + A P Sbjct: 114 DY-EKAIFTPAGPN--VVTFEYAGLKIGLLICFDV-EFPECTRSLALAGAELILVPTALP 169 >gi|329938913|ref|ZP_08288287.1| delta-aminovaleramide aminohydrolase [Streptomyces griseoaurantiacus M045] gi|329301798|gb|EGG45691.1| delta-aminovaleramide aminohydrolase [Streptomyces griseoaurantiacus M045] Length = 263 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 24/191 (12%) Query: 40 LILFTELFISGYP-PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VL 97 L++ ELF++GY EDL + A A D + G + G+P + EG V Sbjct: 36 LLVTPELFLTGYAIGEDLA--RLAEPADGEAADEVAETAARHGLALAYGYPERAPEGTVF 93 Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIV---FRDIRLGILI 149 NSV ++ A + L NY + H E+ F G + IV + +G++I Sbjct: 94 NSVQLVTA-------EGARLANYRKTHLYGGFERAHFTPGERH--IVQAELGGLTVGLMI 144 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 C D+ N+ H G + L A H +V + + + YVN+VG Sbjct: 145 CYDVEFPENVRAH-ALAGTDLLLVPTAQ--LHPFEFVAESLVPVRAFENQMYVAYVNRVG 201 Query: 210 GQDELIFDGAS 220 + E F G S Sbjct: 202 QEGEFEFVGLS 212 >gi|322800350|gb|EFZ21354.1| hypothetical protein SINV_03107 [Solenopsis invicta] Length = 276 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 17/198 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV-FKK 60 + L++A+ QL+ V D A N+++A E A ++ D+++ E F S Y + + Sbjct: 1 VSALRLALVQLS-VGDDKATNVSRAVSFIERAKQERADIVILPECFNSPYGTSHFAPYAE 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDK---- 114 + +SA L ++ G P +D + + N+ + G ++A K Sbjct: 60 NIPDGETSA--ALSEAARKNNVCVIGGTIPERDNDKLYNTCTVWGPDGKLVAKHRKMHLF 117 Query: 115 -INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-- 171 IN+ F E + +G S + ++GI IC DI + + + + +G + L Sbjct: 118 DINIKGKITFRESDSLSAGNSLTTFEAKGCKIGIGICYDI-RFEEMARLYRNKGCQMLIY 176 Query: 172 ---FSLNASPYYHNKLKK 186 F++ P + + L++ Sbjct: 177 PGAFNMTTGPLHWSLLQR 194 >gi|226294486|gb|EEH49906.1| nitrilase [Paracoccidioides brasiliensis Pb18] Length = 346 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 L++AI Q PV D+ + K + EEA + G LI F E +I GYP Sbjct: 6 LRVAITQAEPVYLDLDATVEKTVKIIEEAAQGGAKLIAFPECWIPGYP 53 >gi|40890103|gb|AAR97396.1| nitrilase [uncultured organism] Length = 337 Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 27/52 (51%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 M + +K+A Q PV D+ + K EEA R G LI F E +I GYP Sbjct: 1 MKEAIKVACVQAAPVFLDLDATVDKTVALIEEAARNGARLIAFPETWIPGYP 52 >gi|149914111|ref|ZP_01902643.1| apolipoprotein N-acyltransferase [Roseobacter sp. AzwK-3b] gi|149812395|gb|EDM72226.1| apolipoprotein N-acyltransferase [Roseobacter sp. AzwK-3b] Length = 517 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 37/186 (19%) Query: 53 PEDLVFKKS----FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 P+ +V+ ++ ++ A D + + GGA +V+G R D+ NS+V+LDA G Sbjct: 272 PDLIVWPETAIPVLLERAGPAFDAISAAA--GGAPVVLGLQRTDELRYFNSLVMLDASGQ 329 Query: 108 IIAVRDKINLPNYSEFHEKRTFIS-------------GYSNDP----IVFRDIRLGI-LI 149 ++A+ DK +L + E+ F + GYS+ P I D+ L + LI Sbjct: 330 VVALYDKHHLVPFGEYIPFGDFFARFGITAFSAQAGNGYSSGPGAQVIGLGDLGLALPLI 389 Query: 150 C------EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPII 203 C +D+ L + F + PY H + + G LP+I Sbjct: 390 CYEGVFPQDVRAAPARPDMLLLITNDAWFGTRSGPYQHLAQARLRSVEQG------LPMI 443 Query: 204 YVNQVG 209 V G Sbjct: 444 RVANTG 449 >gi|40890163|gb|AAR97426.1| nitrilase [uncultured organism] Length = 337 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 26/49 (53%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K K+A Q PV D+ + K R +EA +G LI F E FI GYP Sbjct: 7 KYKVAAVQAAPVWLDLDATVDKCIRLIQEAADKGCKLIAFPETFIPGYP 55 >gi|300709585|ref|YP_003735399.1| tRNA methyl transferase [Halalkalicoccus jeotgali B3] gi|299123268|gb|ADJ13607.1| tRNA methyl transferase [Halalkalicoccus jeotgali B3] Length = 288 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAACAKALGCKYDVL 353 V++ SGG+DS+ AAIA DALG++ V T P + LEDA A +G +++++ Sbjct: 20 VLVAFSGGVDSSAVAAIAYDALGEDAVACTA--KSETLPDAELEDARRVAGEIGIRHEIV 77 Query: 354 PIHDLVNHFF 363 +L + F Sbjct: 78 EFSELDDPEF 87 >gi|281201631|gb|EFA75840.1| GMP synthetase [Polysphondylium pallidum PN500] Length = 689 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 6/147 (4%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV++ +SGG+DS +CAA+ A+G E V + + + + K LG + V+ Sbjct: 249 KVLVLVSGGVDSTVCAALIAKAIGPERVIALHIDNGFMRHEESARVEQALKVLGLRLIVV 308 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 + + + + E+ V + +I G+ M +++ L N +E+ + Sbjct: 309 DASQTFYNSTTTIKGVVTEQLKITVHPEEKRKIIGDTFMKVADDEVRKL--GLNPNEVYL 366 Query: 414 GYGTLYGDM----SGGFNPLKDLYKTQ 436 GTL D+ S + + D+ KT Sbjct: 367 AQGTLRPDLIESSSKTVSGVADVIKTH 393 >gi|40890233|gb|AAR97461.1| nitrilase [uncultured organism] Length = 373 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 26/176 (14%) Query: 14 PVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------PEDLVFKKS 61 PV D+ I KA +A + G++L++F E+F+ GYP + + Sbjct: 12 PVFMDVDATIDKACEIIRKAGKDGIELLVFPEVFVPGYPYFIECYPTLNQTAALAAYTDA 71 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPR--QDQEGVLNSVVILDA-GNIIAVRDKINLP 118 I+ + L+ H G +V+G + NS V +D G ++ V K+ P Sbjct: 72 SIEVPGPEVRRLQVAAHQAGVMVVMGVSERLRGSRTCFNSQVFIDRDGTLLGVHRKLQ-P 130 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNS-NICKH-LKKQGAEF 170 Y E+ + G + VF ++G L C W+++ N+ +H L QG + Sbjct: 131 TYV---ERIVWGQGGGHTLKVFDSTLGKVGGLAC---WEHTMNLARHALIAQGIQI 180 >gi|33600102|ref|NP_887662.1| nitrilase [Bordetella bronchiseptica RB50] gi|33567700|emb|CAE31614.1| nitrilase [Bordetella bronchiseptica RB50] Length = 310 Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 23/47 (48%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +IA+ Q PV GD K R A QG L LF E F+ GYP Sbjct: 5 RIAVIQDGPVPGDAMATAEKMSRLAASAKAQGARLALFPEAFVGGYP 51 >gi|268609644|ref|ZP_06143371.1| queuosine biosynthesis protein QueC [Ruminococcus flavefaciens FD-1] Length = 228 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 21/148 (14%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY--- 350 K ++ SGG+DS+ C A+AV G ENV + + Y + ++ A K G + Sbjct: 2 KALVLFSGGLDSSTCLALAVKKYGAENVVALSIYYGQKHNKEIQAAEKLVKYYGVTWKTL 61 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR----------IRGNILMALSNHSKA 400 D+ PI + SL++Q +E P AE ++ R + +A A Sbjct: 62 DLAPI--FADSDCSLLTQSDKEIPKETYAEQLEETDGKPVSTYVPFRNGLFLA-----SA 114 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + SN E+ + YG D +G P Sbjct: 115 ASIALSNDCEV-IYYGAHSDDAAGNAYP 141 >gi|262306085|gb|ACY45635.1| gln amidotransferase [Orchesella imitari] Length = 196 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D S T L+ E C+ +RD V+ HKV++ LSGG+DS +CAA+ Sbjct: 12 NFLFDISVLTPSYTLRSRETQ---CIEYIRDAVK---HHKVLMLLSGGVDSTVCAALLKK 65 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ + + + + + +G K +V+ Sbjct: 66 ALREDQIIAVHVDNGFLRKNESDAVEQSLSRIGLKVNVV 104 >gi|217968149|ref|YP_002353655.1| PP-loop domain protein [Dictyoglomus turgidum DSM 6724] gi|217337248|gb|ACK43041.1| PP-loop domain protein [Dictyoglomus turgidum DSM 6724] Length = 268 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 KV++ SGG+DS +A D LG +NV + L + +++A A+ LG ++ + Sbjct: 16 KKVVVAYSGGVDSTFLLKVAKDTLG-DNVLAVTLISPIFPEREIKEAKRIAEELGVRHII 74 Query: 353 LPIHDLVNH 361 L +L+ H Sbjct: 75 LKNDELLKH 83 >gi|187922083|ref|YP_001893725.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia phytofirmans PsJN] gi|187713277|gb|ACD14501.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia phytofirmans PsJN] Length = 276 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 7/153 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA Q+ P +G+ N+ +A A G +L++ EL +GY + +S + Sbjct: 1 MQIACVQMAPRIGEKDLNVRRAIDFVTRAADLGAELVVLPELANTGYVFDSRAEAESLAE 60 Query: 65 ACSSAIDTLKSDTHDGGAG--IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 T G IV G + + NS V+L + K +L Sbjct: 61 PVPDGSTTAAWSEVASALGVYIVAGIAEKADGALYNSAVLLGPDGYLGSYRKTHLWG--- 117 Query: 123 FHEKRTFISGYSNDPIVFRDI-RLGILICEDIW 154 EK+ F SG PI + R+ I IC D+W Sbjct: 118 -DEKKLFASGDRPSPIYDTPLGRIAIAICYDLW 149 >gi|42528166|ref|NP_973264.1| carbon-nitrogen family hydrolase [Treponema denticola ATCC 35405] gi|41819211|gb|AAS13183.1| hydrolase, carbon-nitrogen family [Treponema denticola ATCC 35405] Length = 243 Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust. Identities = 44/229 (19%), Positives = 93/229 (40%), Gaps = 17/229 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF-- 62 +KI + DI NI++ E+ + DL+LF E F+ G+ +KK Sbjct: 1 MKIGLCASENKNNDIDFNISQIEGFIEKTRSEKPDLLLFGESFLQGFYSLCFEYKKDILT 60 Query: 63 -IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL--- 117 +Q S I ++S I GF D + +S +I+ G ++ + +++ Sbjct: 61 DLQINSEPIAKIRSIAQKEKTAIGFGFIENDHGAIFSSYMIVGKNGEMLCLYKRVSQGWR 120 Query: 118 --PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +++ E + F F RL + IC D+W+++ + + FL+ + Sbjct: 121 IEGTCADYREGKEFFE------FDFGGKRLAVFICGDLWEDNLLEPIISLNPDAFLWPVF 174 Query: 176 ASPYYHNKLKKRHEIVTGQISHV-HLPIIYVNQVGGQDELIFDGASFCF 223 Y + K + + + P++++N + ++ G +F + Sbjct: 175 CG-YTKEEWKNGEAAAYAERTAILDKPVLFINSLVNENAKAIGGGAFVW 222 >gi|292488116|ref|YP_003530993.1| NAD synthetase [Erwinia amylovora CFBP1430] gi|292899327|ref|YP_003538696.1| NH(3)-dependent NAD synthetase [Erwinia amylovora ATCC 49946] gi|291199175|emb|CBJ46289.1| NH(3)-dependent NAD synthetase [Erwinia amylovora ATCC 49946] gi|291553540|emb|CBA20585.1| NAD synthetase [Erwinia amylovora CFBP1430] gi|312172247|emb|CBX80504.1| NAD synthetase [Erwinia amylovora ATCC BAA-2158] Length = 275 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 37/263 (14%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y+++ F K +++G+SGG DS L + A+ + +T Y++ + P ++ Sbjct: 30 LKSYLKRYAFLKSLVLGVSGGQDSTLTGKLCQMAVSELRNETGDDSYQFIAVRLPHGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---SGIVAENIQSRIRGNILMAL 394 D C A+ I + Q L+E S + N ++R R ++ Sbjct: 90 DEHDCQDAIAFIQPDKVITVNIKAAVQASEQALREAGMTLSDFIRGNEKARERMKAQYSI 149 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 + + +++ T + +E G+ T YGD NP+ L K Q QL LG Sbjct: 150 AGMTAGVVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNKGQGKQL---------LKALG 200 Query: 455 PLTEVIPPSILEKSPSAEL---RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN 511 P + K P+A+L RP D+ +L + ++I R ++ E Sbjct: 201 -----CPQHLWLKHPTADLEDDRPGLQDEVAL---GVTYEMIDRYLQGE--------NIE 244 Query: 512 DETVRYVEHLLYGSEYKRRQAPV 534 + +E +E+KRR PV Sbjct: 245 PAAAKIIEDWYVKTEHKRR-TPV 266 >gi|227498705|ref|ZP_03928849.1| archaeosine biosynthesis protein queC [Acidaminococcus sp. D21] gi|226904161|gb|EEH90079.1| archaeosine biosynthesis protein queC [Acidaminococcus sp. D21] Length = 233 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 24/190 (12%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++ SGG+DS C ++AV LG+ENV T+ + Y + L+ A A + L Sbjct: 4 KALVLSSGGVDSTTCVSVAVHELGRENVATVSIFYGQKHRKELDAAQKVADFYHVPHYEL 63 Query: 354 PIHDLVNHF-FSLMS----QFLQEEPSGIVAENIQSRIRG-----NILMALSNHSKAMLL 403 + + + SL+S + + E +A+N + ++ N LM + S AM L Sbjct: 64 DLSKIFQYSNCSLLSHSTEEIIHESYEDQIAQNGEGKVSTYVPFRNGLMLSAVASLAMSL 123 Query: 404 TTSNKSEISVG------YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 + +I +G G Y D S F + + ++ H + P Sbjct: 124 FEKDDVDIYLGAHADDAAGNAYADCSEAFTDAMG----KAISIGTYEQCHLVA----PFV 175 Query: 458 EVIPPSILEK 467 EV I++K Sbjct: 176 EVNKAGIVKK 185 >gi|188534488|ref|YP_001908285.1| Putative hydrolase [Erwinia tasmaniensis Et1/99] gi|188029530|emb|CAO97407.1| Putative hydrolase [Erwinia tasmaniensis Et1/99] Length = 261 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 6/124 (4%) Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD-IRLGILIC 150 D+ V N++V++ G IIA DK++L + E +G S P+V D +++G++ C Sbjct: 88 DRGRVCNALVVIRQGEIIARYDKLHLYDAFTVQESLHVTAGDSIPPLVDVDGMKVGLMTC 147 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE--IVTGQISHVHLPIIYVNQV 208 D+ + + + L GA+ L S + LK+ H +VT + ++ V + Sbjct: 148 YDV-RFPELARRLALDGADLLVL--PSAWVRGPLKEMHWQVLVTARALENTCYVVAVGEC 204 Query: 209 GGQD 212 G ++ Sbjct: 205 GPRN 208 >gi|310800970|gb|EFQ35863.1| carbon-nitrogen hydrolase [Glomerella graminicola M1.001] Length = 325 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 28/48 (58%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +K+A Q PV D+ ++ K + EEA G DL++F E F+S YP Sbjct: 8 VKVAAVQAAPVSFDLEKSLQKLGKLTEEAAAAGADLVVFPEAFLSAYP 55 >gi|294668484|ref|ZP_06733581.1| ExsB protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309447|gb|EFE50690.1| ExsB protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 219 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 31/63 (49%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G+ENVQTI Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGRENVQTITFQYGQRHAVELEHARWIAQDLGVKQIV 63 Query: 353 LPI 355 L + Sbjct: 64 LDL 66 >gi|313124829|ref|YP_004035093.1| hypothetical protein Hbor_00410 [Halogeometricum borinquense DSM 11551] gi|312291194|gb|ADQ65654.1| conserved hypothetical protein TIGR00268 [Halogeometricum borinquense DSM 11551] Length = 302 Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V+I SGG+DS++ AA+A DALG + + + + L+DA A +G +++++ Sbjct: 31 VLIAFSGGVDSSVVAALAHDALGDDAIACTAKSETLPT-EELDDARRVADEIGIRHEIVE 89 Query: 355 IHDLVNHFF 363 +L N F Sbjct: 90 FSELDNPDF 98 >gi|261208316|ref|ZP_05922989.1| NAD synthase [Enterococcus faecium TC 6] gi|289565596|ref|ZP_06446042.1| NAD+ synthetase [Enterococcus faecium D344SRF] gi|294614283|ref|ZP_06694201.1| NAD+ synthetase [Enterococcus faecium E1636] gi|294619173|ref|ZP_06698661.1| NAD+ synthetase [Enterococcus faecium E1679] gi|260077573|gb|EEW65291.1| NAD synthase [Enterococcus faecium TC 6] gi|289162564|gb|EFD10418.1| NAD+ synthetase [Enterococcus faecium D344SRF] gi|291592837|gb|EFF24428.1| NAD+ synthetase [Enterococcus faecium E1636] gi|291594598|gb|EFF25987.1| NAD+ synthetase [Enterococcus faecium E1679] Length = 274 Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 33/216 (15%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIA-------VDALGKENVQTIMLPYKYTSPQ 334 ++ Y++K F K ++G+SGG DS L +A + EN Q I + Y Sbjct: 30 MKAYLKKYPFLKTFVLGISGGQDSTLAGRLAQLTMEEMREETKDENYQFIAVRLPYGEQA 89 Query: 335 SLEDAAAC----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 +DA A + + ++ P D S + + G NI++R R Sbjct: 90 DEQDAKAALDFIQPDVSLRVNIKPAVDAQVQVLSEAGVEISDFNKG----NIKARQRMIT 145 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +L T + +E G+ T +GD PL L K Q QL N+ Sbjct: 146 QYAVAGERAGAVLGTDHAAENITGFFTKFGDGGADILPLFRLDKRQGKQLLQALNA---- 201 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 P + K P+A+L +P D+ +L Sbjct: 202 ----------PEKLYTKIPTADLEDGKPMIADEVAL 227 >gi|27377687|ref|NP_769216.1| N-carbamyl-D-amino acid amidohydrolase [Bradyrhizobium japonicum USDA 110] gi|27350832|dbj|BAC47841.1| N-carbamyl-D-amino acid amidohydrolase [Bradyrhizobium japonicum USDA 110] Length = 319 Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%) Query: 1 MLKKLKIAIAQLNPVVGD------IAGNIAKARRAREEANRQGMDLILFTELFISGYPPE 54 M + + IA QL P+ +A +A R+AR AN G DLI++ EL ++ + P Sbjct: 1 MARFVTIAAGQLGPIARAETRTEVVARLMALMRQAR--AN--GCDLIVYPELALTTFFPR 56 Query: 55 ---------DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL----NSVV 101 D F++ A + A+ L + G G +G+ E + N+ + Sbjct: 57 WYFEDQAEIDAFFEREMPGAQTQALFDLAREI---GIGFYLGYAELTVEAGVARRYNTSI 113 Query: 102 ILD-AGNIIAVRDKINLPNYSEFH--------EKRTFISGYSNDPIVFRDIRLGILICED 152 ++D +G I+A K++LP ++E EKR F G +G+ IC D Sbjct: 114 LVDKSGAIVAKYRKVHLPGHAEHEPWREFQHLEKRYFEPGSGFGVTNAFGGVMGMAICND 173 Query: 153 IWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHL 200 + S + + QG E + +P HN H+ ++ + H HL Sbjct: 174 -RRWSETYRVMGLQGVEMVMIGYNTP-VHNPPAPEHDDLS--LFHNHL 217 >gi|237737122|ref|ZP_04567603.1| nitrilase [Fusobacterium mortiferum ATCC 9817] gi|229420984|gb|EEO36031.1| nitrilase [Fusobacterium mortiferum ATCC 9817] Length = 307 Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 31/52 (59%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 + +K KIA+ Q P++ + + K EE+ +G +LI+F ELFI GYP Sbjct: 4 LKEKCKIAVVQAAPILFNKDECVKKVIDYIEESASKGSELIVFPELFIPGYP 55 >gi|94994862|ref|YP_602960.1| NAD synthetase [Streptococcus pyogenes MGAS10750] gi|94548370|gb|ABF38416.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pyogenes MGAS10750] Length = 288 Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + + Y++ + P ++ Sbjct: 44 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREEASDQAYQFIAVRLPYGVQA 103 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL + P L +N ++ Q + +G+ NI++R R Sbjct: 104 DEADAQKALAF---IAPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 160 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 161 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 211 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 212 VLGA-----DAALYEKVPTADLEDQKPGLADEVALGVTYQDIDDYLE 253 >gi|325473540|gb|EGC76733.1| tRNA-specific 2-thiouridylase mnmA [Treponema denticola F0402] Length = 383 Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 10/96 (10%) Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVD-ALGKENVQTIMLP-----YKYTSPQSLE 337 R++ + N KV++GLSGG+DSA+ A + +D V +LP YK + +E Sbjct: 9 RNFKRILNLMKVLVGLSGGVDSAVAAKLLIDQGYDVTGVTMQLLPKLSGIYKEQT-DDIE 67 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 DA A LG K+ V +D+ F + + + EE Sbjct: 68 DAKKVAAKLGIKHIV---YDMRETFKAEIIDYFVEE 100 >gi|302689989|ref|XP_003034674.1| hypothetical protein SCHCODRAFT_15106 [Schizophyllum commune H4-8] gi|300108369|gb|EFI99771.1| hypothetical protein SCHCODRAFT_15106 [Schizophyllum commune H4-8] Length = 323 Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 27/47 (57%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY 51 L++A+ Q NP +G + NIA+ R + Q +DL+ E+ +GY Sbjct: 8 LRVAVVQFNPKIGQVQANIARVRELCGKLEPQSVDLVCLPEMAFTGY 54 >gi|242372831|ref|ZP_04818405.1| PP-loop superfamily ATP-binding protein [Staphylococcus epidermidis M23864:W1] gi|242349450|gb|EES41051.1| PP-loop superfamily ATP-binding protein [Staphylococcus epidermidis M23864:W1] Length = 278 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 V+I SGG+DS+L A+D LG E+V+ +++ + + + A ++LG DVL Sbjct: 24 VVIAFSGGVDSSLVLKKAIDVLGAEHVKPVVVKSELFRNEEFDQAIELGRSLGV--DVL 80 >gi|254588106|ref|NP_956881.2| GMP synthase [Danio rerio] gi|220672808|emb|CAX14207.1| guanine monphosphate synthetase [Danio rerio] Length = 692 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 +C+ +R+ V K+ KV++ LSGG+DS +C A+ AL +E V + + + + + Sbjct: 224 SCIREIREKVDKS---KVLVLLSGGVDSTVCTALLNKALNQEQVIAVHIDNGFMRKRESQ 280 Query: 338 DAAACAKALGCKYDVL 353 LG K V+ Sbjct: 281 SVEEALTKLGIKLKVV 296 >gi|298346028|ref|YP_003718715.1| NAD(+) synthase [Mobiluncus curtisii ATCC 43063] gi|298236089|gb|ADI67221.1| NAD(+) synthase (glutamine-hydrolyzing) [Mobiluncus curtisii ATCC 43063] Length = 703 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 50/171 (29%) Query: 294 KVIIGLSGGIDSALCAAIAV------------------------------------DALG 317 +I+G+SGG+DS L +A D+ G Sbjct: 327 NIILGISGGLDSTLALLVATAARDSALAHESGRQTAEPNRKSNDLLSPAEHLENTRDSAG 386 Query: 318 -KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 K + T LP TS + +A A A+G +++ I M P+G Sbjct: 387 CKPEILTFSLPGFATSAHTKSNAQKLAAAVGVNCELIDIRPAATEMLKTMGH-----PAG 441 Query: 377 -------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + EN+Q+ +R + L L+N +L T + SE ++G+ T YG Sbjct: 442 HGEPIYDVTFENVQAGLRSDYLFRLANQRHGFVLGTGDLSESALGW-TTYG 491 >gi|119488897|ref|ZP_01621859.1| hypothetical protein L8106_20108 [Lyngbya sp. PCC 8106] gi|119455058|gb|EAW36200.1| hypothetical protein L8106_20108 [Lyngbya sp. PCC 8106] Length = 274 Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + +I SGGIDS L A IA D LG + + P+ LEDA A +G + Sbjct: 14 QEMKQALIAYSGGIDSTLVAKIAYDVLGDRALAVTAVSPSLL-PEDLEDARIQAVEIGIR 72 Query: 350 YDVLPIHDLVNHFFS 364 + + H++ N ++ Sbjct: 73 HQEISTHEMENPNYT 87 >gi|17557111|ref|NP_497791.1| NITrilase family member (nit-1) [Caenorhabditis elegans] gi|3881500|emb|CAA84681.1| C. elegans protein ZK1058.6, confirmed by transcript evidence [Caenorhabditis elegans] Length = 305 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 26/47 (55%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIAI Q + D + K ++ EEA G +L+LF E FI GYP Sbjct: 3 KIAIVQAGTPLFDKPATLEKVKKNVEEAAGNGAELVLFPEAFIGGYP 49 >gi|323143038|ref|ZP_08077744.1| protein ExsB [Succinatimonas hippei YIT 12066] gi|322417232|gb|EFY07860.1| protein ExsB [Succinatimonas hippei YIT 12066] Length = 230 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 28/47 (59%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 K ++ SGG+DS C A AVD LG ENV ++ + Y + L+ AA Sbjct: 3 KALVLSSGGVDSTTCLAFAVDKLGAENVSSVSIFYGQKHKKELQCAA 49 >gi|308481173|ref|XP_003102792.1| hypothetical protein CRE_30003 [Caenorhabditis remanei] gi|308260878|gb|EFP04831.1| hypothetical protein CRE_30003 [Caenorhabditis remanei] Length = 297 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 25/148 (16%) Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVA-ENIQSRIRGNIL-----MALSNHSKA---ML 402 V I + N + M F + +A +NIQ+RIR + +AL +H + ++ Sbjct: 53 VSSILKVFNVAYGFMPSFQSSDNREAMALQNIQARIRMVLAYLFAQLALVSHKRPGGLLV 112 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ-LASWRNSHGITSGLGPLTEVIP 461 L T+N E VGY T Y S NP+ + K + Q L +G+T+ Sbjct: 113 LGTANVDESLVGYLTKYDCSSADINPIGSVSKRDLRQFLEIAYEKYGMTA---------L 163 Query: 462 PSILEKSPSAELRP------HQTDQESL 483 S+++ +P+AELRP QTD+ + Sbjct: 164 RSVIDSTPTAELRPLVDGKVSQTDEAEI 191 >gi|294627406|ref|ZP_06705991.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598361|gb|EFF42513.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 243 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 90/244 (36%), Gaps = 29/244 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ AQ+ G + NI+K A +G D+++F EL ++GY P + + +Q Sbjct: 1 MKLTAAQILSTPGQVEENISKHLDVIRLAASKGADVLVFPELSLTGYEPG--LAQVLAVQ 58 Query: 65 ACSSAID--TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL-PNYS 121 D L SD H G I VG P + +G S++ G K L P+ Sbjct: 59 LADQRFDQFQLASDRH--GMLIAVGAPTKGAKGTEISMLCFQPGLERTSYSKQQLHPDEL 116 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F F +G + D L IC + + S+ + GAE Y Sbjct: 117 PF-----FTAGTEQLVLRHADQLLAPAICYESLQASH-AEQAAASGAEL---------YL 161 Query: 182 NKLKKRHEIVTGQISHV-------HLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 + K VT SH + ++ N VG D I G S + L Sbjct: 162 ASVAKSERGVTSAYSHYPTIAKTHSMTVLMANCVGPADTFIGAGRSAIWSSDGDLVSSAD 221 Query: 235 HFSE 238 F E Sbjct: 222 AFQE 225 >gi|269215411|ref|ZP_06159265.1| ExsB protein [Slackia exigua ATCC 700122] gi|269130898|gb|EEZ61973.1| ExsB protein [Slackia exigua ATCC 700122] Length = 268 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 1/104 (0%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + ++ SGGIDS C A+AV+ NV T+ Y + L+ A A A+ G + VL Sbjct: 33 RALVLSSGGIDSTTCLALAVERFSTANVSTVSFFYGQRHRKELDAAQAVAERYGVAHYVL 92 Query: 354 PIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 I ++ + +LM+ Q+ G A+ + R N + N Sbjct: 93 DIASVLRYSDNALMAGSTQDVARGTYADQKDAAGRPNTYVPFRN 136 >gi|119713490|gb|ABL97543.1| carbon-nitrogen hydrolase family protein [uncultured marine bacterium EB0_35D03] Length = 257 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 17/138 (12%) Query: 24 AKARR--AREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAID-----TLKSD 76 A+ +R A+ + NR +DL++ ELF+SGY ED + K F + SS D +L + Sbjct: 19 ARIKRLDAQLKKNR-ALDLMICPELFLSGYGSEDKI--KEFCE--SSKGDYAKKISLLAK 73 Query: 77 THDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSN 135 T+ I+ G+P ++ + N+ + D G +A K LP + E + F G + Sbjct: 74 TY--ATAILYGYPEKNSNKLFNAAQLFDKNGKSLANHRKKMLPPTAS--ESKIFTPGDGD 129 Query: 136 DPIVFRDIRLGILICEDI 153 + I+ I+IC ++ Sbjct: 130 SIVWINGIKTAIVICYEL 147 >gi|117164727|emb|CAJ88275.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877] Length = 276 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 47/237 (19%), Positives = 95/237 (40%), Gaps = 32/237 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ-------TIMLPYKYTSPQS 335 L + + +++G+SGG+DS + + A+ + + + LP + + Sbjct: 36 LTERLTSTGLRALVLGISGGVDSTVAGRLCQLAVERARAEGHEARFYAMRLPNGVQADE- 94 Query: 336 LEDAAACAKALGCKY----DVLPIHD-LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 DA + + D+ P D + + F V N+++R R Sbjct: 95 -HDAQLALSFIKADHVLTVDIKPASDATLEALLAADVAFRDAHHQDFVHGNVKARQRMIA 153 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +++ T + +E G+ T +GD + PL L K R + Sbjct: 154 QYAVAGAHNGLVVGTDHAAEAVSGFFTKFGDGAADVVPLTGLTK---------RRVRAVG 204 Query: 451 SGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIKRIVENEESF 503 LG P ++ K P+A+L P + D+++L Y +DD ++ +E++F Sbjct: 205 DALGA-----PAELVRKVPTADLETLDPGKADEDALGVTYDQIDDFLEGKPVDEQAF 256 >gi|34785183|gb|AAH56730.1| Guanine monphosphate synthetase [Danio rerio] gi|220672807|emb|CAX14206.1| guanine monphosphate synthetase [Danio rerio] Length = 359 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 12/119 (10%) Query: 241 FMTEWHYDQQLSQW------NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 + T++H + L++ N++ + + + +Q + +C+ +R+ V K+ K Sbjct: 184 YGTQFHPEVDLTERGMDMLRNFLFEIAGCSSNFTVQNRQM---SCIREIREKVDKS---K 237 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 V++ LSGG+DS +C A+ AL +E V + + + + + LG K V+ Sbjct: 238 VLVLLSGGVDSTVCTALLNKALNQEQVIAVHIDNGFMRKRESQSVEEALTKLGIKLKVV 296 >gi|302911086|ref|XP_003050415.1| hypothetical protein NECHADRAFT_71806 [Nectria haematococca mpVI 77-13-4] gi|256731352|gb|EEU44702.1| hypothetical protein NECHADRAFT_71806 [Nectria haematococca mpVI 77-13-4] Length = 1034 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 37/73 (50%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I Q P VGD+ N+ +A AN + +DL++ EL SGY + L F++ Sbjct: 1 MRIGCLQFAPQVGDVDNNLNRADAVLSRANPEDLDLLVLPELAFSGYNFKSLQDITPFLE 60 Query: 65 ACSSAIDTLKSDT 77 S I +L + T Sbjct: 61 PSGSGITSLWART 73 >gi|71418021|ref|XP_810731.1| NAD+ synthase [Trypanosoma cruzi strain CL Brener] gi|70875308|gb|EAN88880.1| NAD+ synthase, putative [Trypanosoma cruzi] Length = 294 Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust. Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 43/229 (18%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI--------MLPYKYTSP 333 +L +Y+ + + +SGGIDSA+ A+ A+ N + + + Sbjct: 36 ALNEYMASHGLKVCVTSVSGGIDSAVVLALCSRAMRMPNSPIVRNVGICQPICSSAWALA 95 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN-----IQSRIRG 388 + E+ +C AL D +H ++ E GI +N ++S +R Sbjct: 96 RGRENIQSCG-ALEVIVDQTELHKQLSRIV--------ETAVGIDGQNFARGQLRSYMRT 146 Query: 389 NILMALSN-----HSKAMLLTTSNKSEIS-VGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 + ++ + A+++ T N E + Y GD + DL+K++VF +A Sbjct: 147 PVAYYVAQLYSQEGNAAIVMGTGNMDEDGYLAYFCKAGDGVVDVQLISDLHKSEVFLVA- 205 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILD 490 LG +P + L+ SPSA+L QTD+E L PY ++ Sbjct: 206 --------QELG-----VPANTLQASPSADLWEGQTDEEELGFPYDFVE 241 >gi|304385513|ref|ZP_07367858.1| NAD+ synthetase [Pediococcus acidilactici DSM 20284] gi|304328720|gb|EFL95941.1| NAD+ synthetase [Pediococcus acidilactici DSM 20284] Length = 272 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 37/221 (16%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSPQSLEDAAA 341 + +++G+SGG DS L A+A A+ + +T + LPY + +S DA Sbjct: 40 SLRSLVLGISGGQDSTLAGALAQMAIRELREETGNADYQFIAVRLPYGVQADES--DAMK 97 Query: 342 CAKALGC----KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 + + + D+ P D + + + G NI++R R ++ Sbjct: 98 AIEFMQADRVVRIDIKPAADAMVAAIEATGVQVSDFNKG----NIKARQRMIAQYGIAGE 153 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 + +++ T + +E G+ T +GD PL L K Q + N+ Sbjct: 154 TAGIVVGTDHAAESVTGFYTKFGDGGADIVPLWRLNKRQGKAMLKALNA----------- 202 Query: 458 EVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 P + EK P+A+L RP D+ +L Y +DD ++ Sbjct: 203 ---PVELYEKVPTADLEDERPALPDEVALGVTYQDIDDYLE 240 >gi|237800973|ref|ZP_04589434.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806478|ref|ZP_04593182.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023829|gb|EGI03886.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027591|gb|EGI07646.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 249 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 20/209 (9%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A AQ + G+ N+A + A G +LF EL ++GY P+ + +K + Sbjct: 6 LAAAQFCSLRGEFKHNLAGHLAFMQRAADLGAHYLLFPELSLTGYEPD--LARKLVLSPD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGV--LNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +D +++ VG P + +G + ++ G++I+ + Y Sbjct: 64 DACLDPIRALAMQLQLVTTVGVPLKGPDGRIEIGALTFTTHGDVISYAKQ-----YLHRG 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--SP--YY 180 E F G + + R+G+ +C D + ++ + G +L++ + SP Y Sbjct: 119 EDAVFSPGSEDCYLHLDQHRIGLCVCADFSHSEHVQR--ISDGGAWLYAASVLISPGGYA 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 H+ E++ G LP++ N G Sbjct: 177 HDA-----ELLAGHAQRHRLPVLMANHGG 200 >gi|238762366|ref|ZP_04623337.1| Nitrilase [Yersinia kristensenii ATCC 33638] gi|238699351|gb|EEP92097.1| Nitrilase [Yersinia kristensenii ATCC 33638] Length = 340 Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 26/45 (57%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 A+ Q +P+ D+ I KA +A RQG +I F+ELF GYP Sbjct: 11 AVVQASPIYLDLDATINKAVDLIAQAARQGAKIIAFSELFFPGYP 55 >gi|257486076|ref|ZP_05640117.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010424|gb|EGH90480.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 246 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 47/229 (20%), Positives = 92/229 (40%), Gaps = 17/229 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ GDI N+A + A G +LF EL ++GY P+ + + + A Sbjct: 6 LAVAQFCSARGDIEQNLAGHLAFMQRAADLGASYLLFPELSLTGYEPD--LARALALHAD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN-YSEFHE 125 + ++ +K+ +G P + N +++ A A D Y E Sbjct: 64 DARLEPIKALAMKLRLVTTIGVPLKGA----NDSILIGALTFTADGDVTTYAKQYLHPGE 119 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 + F +G + + ++G+ +C D + +++ + + S+ SP Sbjct: 120 DKVFSAGDKDCYLPIDQQQIGLCVCADFTQPAHVQRMAAGGAWVYAASVLISP---GGYA 176 Query: 186 KRHEIVTGQISHVHLPIIYVNQ---VGGQDEL----IFDGASFCFDGQQ 227 + E++ G +LP++ N GG + ++DGA G Q Sbjct: 177 QDAELLAGHARRHNLPVLVANHGAPTGGWESAGRSGLWDGAGRWIGGMQ 225 >gi|295099872|emb|CBK88961.1| Predicted amidohydrolase [Eubacterium cylindroides T2-87] Length = 272 Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 10/155 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI I Q+ V DI N++ + + ++ ++I+ E++ + Y E ++ Sbjct: 1 MKIGIIQVK-VSSDIKANLSFVAKHIQSCIKEHAEIIVLNEMWNAPYDNEQILLSYKTHD 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDK-----INLP 118 C L+ ++ I+ G R++ + N+ I + G I DK +N+ Sbjct: 60 KCYQ---LLQEESRKHQIIIIGGTIARKENNKIYNTCHIFENGKHICQYDKMHLFEVNIE 116 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 + + E F G S + R GIL+C DI Sbjct: 117 GHKLYSESEVFTPGNSIKTFDTKYGRFGILVCYDI 151 >gi|40890193|gb|AAR97441.1| nitrilase [uncultured organism] Length = 316 Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 27/47 (57%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K+AI Q PV D I A EEA +G DL++F+E FI GYP Sbjct: 3 KLAIVQKPPVFLDKQKTIELAVANIEEAAAKGADLVVFSEAFIPGYP 49 >gi|55379466|ref|YP_137316.1| tRNA methyl transferase [Haloarcula marismortui ATCC 43049] gi|55232191|gb|AAV47610.1| tRNA methyl transferase [Haloarcula marismortui ATCC 43049] Length = 290 Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V+I SGG+DS++ AA+A DALG + + + + L DA A+ +G +++++ Sbjct: 21 VLIAFSGGVDSSVVAALAYDALGDDAIACTAKSETLPAAE-LTDATRVAEEIGIRHEIVE 79 Query: 355 IHDLVNHFF 363 +L + F Sbjct: 80 FSELDSEEF 88 >gi|319776566|ref|YP_004139054.1| PP-loop superfamily ATPase [Haemophilus influenzae F3047] gi|329124078|ref|ZP_08252625.1| transcription regulator ExsB [Haemophilus aegyptius ATCC 11116] gi|317451157|emb|CBY87390.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae F3047] gi|327467503|gb|EGF13001.1| transcription regulator ExsB [Haemophilus aegyptius ATCC 11116] Length = 227 Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 30/60 (50%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKENV+ I Y LE A + A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARSIAQDLGIK 66 >gi|308080266|ref|NP_001183187.1| hypothetical protein LOC100501566 [Zea mays] gi|238009930|gb|ACR36000.1| unknown [Zea mays] Length = 272 Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust. Identities = 53/247 (21%), Positives = 87/247 (35%), Gaps = 27/247 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK- 60 ++ L++A LN D N+ + + + A G + + EL ++GY ED ++ Sbjct: 1 MRLLRVATCNLNQWAMDFDTNLRNVKESIKRAKAAGAVIRVGPELELTGYGCEDHFLEQD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + A D L D D +G P N V II +R K++L N Sbjct: 61 TTAHAWECLKDILTGDYTDN-ILCSIGMPVIFNSVRYNCQVFCLNRKIIMIRPKMSLAND 119 Query: 121 SEFHEKRTFISGYSNDPIV-------------------------FRDIRLGILICEDIWK 155 + E R F + IV F D+ L CE+++ Sbjct: 120 GNYREFRWFSAWTFKGEIVDFQLPVEVSEAISQDTVPFGYGYMRFIDVSLAAETCEELFT 179 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 + L G E + + S + KL R + + +Y NQ G + Sbjct: 180 ANAPRIDLALNGVEVFMNASGSHHQLRKLNLRIDSIRSATQTCGGVYMYANQQGCDGGRL 239 Query: 216 FDGASFC 222 + G S C Sbjct: 240 YYGISKC 246 >gi|302529151|ref|ZP_07281493.1| hydrolase [Streptomyces sp. AA4] gi|302438046|gb|EFL09862.1| hydrolase [Streptomyces sp. AA4] Length = 258 Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 20/146 (13%) Query: 83 GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDP 137 G+V G+P +D + V NS +L A L NY + H ++ F G ++P Sbjct: 70 GLVYGYPERDGDAVYNSAQLLSA-------QGERLANYRKTHLFGDLDRDQFSPG--DEP 120 Query: 138 IV---FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQ 194 +V F +R G+LIC D+ + H G + L A + ++ V Sbjct: 121 VVQADFNGLRTGLLICYDVEFPELVRAH-ALAGTDLLLVPTALMRPYERVADLLIPVRAH 179 Query: 195 ISHVHLPIIYVNQVGGQDELIFDGAS 220 S ++ I+Y N+ + EL + G S Sbjct: 180 ESQLY--IVYANRCDTEGELTYCGRS 203 >gi|156741802|ref|YP_001431931.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Roseiflexus castenholzii DSM 13941] gi|156233130|gb|ABU57913.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Roseiflexus castenholzii DSM 13941] Length = 294 Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 13/184 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--PPEDLVF 58 M + + + + Q+ + D N A EA +G ++ ELF S Y ED Sbjct: 1 MSRLVAVGLVQMR-MTDDPQRNFGAAVEGIREAAARGAQIVCLPELFRSLYFCQSED--- 56 Query: 59 KKSFIQA---CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRD 113 + F A + + L + D G I+ + EG+ N+ ++DA G + Sbjct: 57 HRHFALAEPIPGPSTEALSALARDLGVVIIASLFEKRAEGLYHNTAAVIDADGRYLGKYR 116 Query: 114 KINLPNYSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 K+++P+ ++EK F G R R G+LIC D W + +GA+ LF Sbjct: 117 KMHIPDDPLYYEKFYFTPGDLGFKVFATRYARAGVLICWDQW-YPEAARLTALRGADILF 175 Query: 173 SLNA 176 A Sbjct: 176 YPTA 179 >gi|253989570|ref|YP_003040926.1| nitrilase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781020|emb|CAQ84182.1| nitrilase [Photorhabdus asymbiotica] Length = 349 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP----EDLVFKKS 61 ++A Q PV D+ +AK E A G LI F+E +I GYP + ++ Sbjct: 8 RVAAVQAAPVFLDLEATVAKTITLIESAANNGAKLIAFSETWIPGYPWFIWLDSPLWGMQ 67 Query: 62 FIQAC---SSAIDT-----LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVR 112 F++ S ID+ ++ D +V+GF +D+ + S I+D G + R Sbjct: 68 FLKQYHNNSLVIDSKQYQRIEQAAADNNIMVVLGFSEKDKGSLYMSQSIIDQTGKTLLTR 127 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILIC 150 K+ P + E+ F G +D + + ++G L C Sbjct: 128 RKLK-PTHV---ERTIFGEGDGSDLSIVKTPLGKVGALNC 163 >gi|237747043|ref|ZP_04577523.1| nitrilase [Oxalobacter formigenes HOxBLS] gi|229378394|gb|EEO28485.1| nitrilase [Oxalobacter formigenes HOxBLS] Length = 267 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 23/163 (14%) Query: 6 KIAIAQL--NPVVGDIAGNIAKARRAREEANRQGMDLILFTELF--ISGYPPEDL----V 57 K+A Q+ PV+ + NI ARR +EA +G DL+L E + I E L V Sbjct: 5 KVAAIQMVSTPVIEE---NIKTARRLIDEAAGKGADLVLLPEYWPSIGHSDSERLQHAEV 61 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKIN 116 F IQ + + GG + + E VLNS ++ DA G +A DKI+ Sbjct: 62 FGSGLIQDFMAEVAQKNKIWLIGG---TLSLVSPEPEKVLNSSLVYDANGKNVARYDKIH 118 Query: 117 LPNYS---EFHEKRTFISGYSNDPIVFRDI---RLGILICEDI 153 L +S E +++ ISG D +V D ++G+ +C D+ Sbjct: 119 LFGFSTERESYDESLAISG--GDEVVTFDAPFGKVGLSVCYDL 159 >gi|218962062|ref|YP_001741837.1| hypothetical protein CLOAM1799 [Candidatus Cloacamonas acidaminovorans] gi|167730719|emb|CAO81631.1| hypothetical protein CLOAM1799 [Candidatus Cloacamonas acidaminovorans] Length = 252 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 18/161 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+ A + PV+ I IA R EEA Q DLI+F E + G + + S Q Sbjct: 1 MKIS-ACVFPVLEKIDQAIASMHRYIEEAGAQKSDLIIFPEAALGGLNITGIYTQDS--Q 57 Query: 65 AC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR----DKIN 116 C SS + +L+ GI GF +++ + +S V+ D IAV + Sbjct: 58 NCLAMDSSEVKSLQQKAIQYSIGIGFGFLEKEKGCIYDSFVLFDKFGQIAVHYHRISRGW 117 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWK 155 LP+ E + N P + I ++G+LIC D+++ Sbjct: 118 LPS-----EVTSNDYACGNTPGIADTIYGKIGVLICGDLFE 153 >gi|154249760|ref|YP_001410585.1| ExsB family protein [Fervidobacterium nodosum Rt17-B1] gi|154153696|gb|ABS60928.1| ExsB family protein [Fervidobacterium nodosum Rt17-B1] Length = 358 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPY-KYTSPQSLEDAAACAKALGCKYDVL 353 ++ SGG+DS A + +A+GKEN++ + + Y YT SLE + A+ G K L Sbjct: 25 VVAFSGGMDSTASALLCAEAIGKENIELVHVVYGPYTYSNSLEIVSEFAEKFGFKITFL 83 >gi|87125503|ref|ZP_01081348.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. RS9917] gi|86166803|gb|EAQ68065.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. RS9917] Length = 583 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 39/217 (17%) Query: 178 PYYHNKLKK---RHE----IVTGQISHVHL---PIIYVNQVGG--QDELIFDG------- 218 P+ H L++ H+ +VTG H H P + Q GG Q L G Sbjct: 87 PHRHTGLRQFPGHHQAIAAVVTGAHQHQHAGVQPRGALEQPGGHRQPHLFHQGRHRQTTG 146 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ--LSQWNYMSDDSASTM-YIPLQEEEAD 275 F+G+ LA H N T +++ S W D S M P+ EA Sbjct: 147 QPILFEGRHPLA---PHQPMGNIGTGPGHERAGGTSLWR---DPVPSPMDSAPV--TEAG 198 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSP 333 + A + +LR + + H+V +GLSGG+DS+L AA+ V+A + T+ L Sbjct: 199 HQA-LANLRHWPGE---HRVAVGLSGGVDSSLTAALLVEAGWQVEGLTLWLMSGKGACCA 254 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL 370 + L DAA LG + V+ D HF + FL Sbjct: 255 EGLVDAAGICDQLGIPHHVV---DFRAHFKEQIVDFL 288 >gi|145627828|ref|ZP_01783629.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 22.1-21] gi|145639290|ref|ZP_01794896.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae PittII] gi|144979603|gb|EDJ89262.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 22.1-21] gi|145271593|gb|EDK11504.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae PittII] gi|309751166|gb|ADO81150.1| Probable 7-cyano-7-deazaguanine (preQ0) synthesis protein QueC [Haemophilus influenzae R2866] Length = 227 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 32/64 (50%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKENV+ I Y LE A + A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARSIAQDLGIK 66 Query: 350 YDVL 353 ++ Sbjct: 67 QTLI 70 >gi|313207109|ref|YP_004046286.1| nad+ synthetase [Riemerella anatipestifer DSM 15868] gi|312446425|gb|ADQ82780.1| NAD+ synthetase [Riemerella anatipestifer DSM 15868] gi|315022493|gb|EFT35520.1| NH(3)-dependent NAD synthetase [Riemerella anatipestifer RA-YM] gi|325335453|gb|ADZ11727.1| NAD synthase [Riemerella anatipestifer RA-GD] Length = 263 Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 16/132 (12%) Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSE-ISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 N +SR+R L + ++ T NK E +G+ T YGD +P+ DLYKT+V+ Sbjct: 116 NTRSRLRMLTLYYYGQINGLLVCGTGNKVEDFGIGFYTKYGDGGVDVSPIADLYKTEVYH 175 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL-PPYPILDDIIKRI-V 497 L+ N + + E IP L + +TD++ + YP L+ I K Sbjct: 176 LSKALNL------VKSIQEAIPTDGLWDT-------DRTDEQQIGATYPELEKIQKEYPT 222 Query: 498 ENEESFINNDQE 509 + E + D+E Sbjct: 223 KTLEDYTGRDRE 234 >gi|296134482|ref|YP_003641729.1| Queuosine synthesis-like protein [Thermincola sp. JR] gi|296033060|gb|ADG83828.1| Queuosine synthesis-like protein [Thermincola potens JR] Length = 276 Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F +I SGG DS L A +A D LG + + + YT + +E+A A +LG + Sbjct: 17 FDSAVIAFSGGCDSTLLAKVAHDVLGSKALAVTAVSPTYTQAE-IEEAKKLADSLGLNHM 75 Query: 352 VLPIHDLVNHFF 363 ++ ++L N F Sbjct: 76 IIYTNELENPDF 87 >gi|284028391|ref|YP_003378322.1| NAD+ synthetase [Kribbella flavida DSM 17836] gi|283807684|gb|ADB29523.1| NAD+ synthetase [Kribbella flavida DSM 17836] Length = 271 Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 35/219 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVDAL----GKENVQTIMLPYKYTSPQ 334 L D +++ ++G+SGG+DS LC +AV+ + G + LPY + Sbjct: 35 LADQLRRTGATSYVLGISGGVDSTVAGRLCQ-LAVERVRADGGSATFVAMRLPYGVQHDE 93 Query: 335 SLEDAAACAKALG-CKYD---VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 EDA +AL + D + I D + M + A N+++R R Sbjct: 94 --EDAQ---RALDFIRPDETLTVDIKDSTDAMVDAMKHVGLGDRVEFHAGNVKARERMIA 148 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +++ T + +E +G+ T +GD + PL L K R I Sbjct: 149 QYAVAGVRGGLVVGTDHAAEAVMGFYTKWGDGACDVTPLSGLTK---------RRVRAIG 199 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPIL 489 LG P I K P+A+L ++D+ +P +L Sbjct: 200 ERLGA-----SPEITGKVPTADL---ESDRPGIPDETVL 230 >gi|40890303|gb|AAR97496.1| nitrilase [uncultured organism] Length = 316 Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 26/174 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV---- 57 + +K A Q++PV+ I K R E RQG+ F E I YP V Sbjct: 1 MTTVKAAAVQMSPVLYSRDDTIEKICRQIIELGRQGVQFATFPETVIPYYPYFAFVQRPY 60 Query: 58 -FKKSFIQACSSAIDTLKSDTHDGG-----AGIVVGFPRQDQEG--VLNSVVILDAGNII 109 + Q A+ TH G AGIVV ++EG + + ++ DA ++ Sbjct: 61 EMSAQYHQLLDQAVTVPSGSTHAIGAACKQAGIVVSIGVNEREGGTLYGTQLLFDADGLL 120 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSN 158 R + P Y HE+ + G D R + R+G L C W++ N Sbjct: 121 IQRRRKITPTY---HERMIWGQG---DGSGLRAVDSAVGRIGQLAC---WEHHN 165 >gi|313678598|ref|YP_004056338.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Mycoplasma bovis PG45] gi|312950108|gb|ADR24703.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Mycoplasma bovis PG45] Length = 374 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 28/108 (25%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAV--------------------DALGKENVQTIMLPYK 329 +N KVI+G+SGG+DS++CA + + D LG EN+ + P Sbjct: 2 SNKKKVILGMSGGVDSSVCAYLLLKQGYEVEGLFMRNWDSMLNNDFLGNENISQDICP-- 59 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS-LMSQFLQEEPSG 376 Q DA A LG K L D VN +++ + F+ E +G Sbjct: 60 --QEQDYHDALEVANKLGIK---LHRVDFVNEYWNDVFKTFISEYEAG 102 >gi|40890075|gb|AAR97382.1| nitrilase [uncultured organism] Length = 351 Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 26/48 (54%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIA Q +PV D + KA R EA +QG LI+F E FI YP Sbjct: 8 FKIAAVQASPVFLDREATVEKACRLIAEAAKQGARLIVFPESFIPTYP 55 >gi|319952525|ref|YP_004163792.1| nitrilase [Cellulophaga algicola DSM 14237] gi|319421185|gb|ADV48294.1| Nitrilase [Cellulophaga algicola DSM 14237] Length = 316 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 28/174 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------PED 55 LK+A+AQ+ PV D A + K + EA + +L++F E + GYP D Sbjct: 5 LKVALAQIAPVWLDKAATLKKIEASIIEAANEKAELVIFGEALLPGYPFWLALTDGATWD 64 Query: 56 LVFKKSF--------IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEG----VLNSVVI 102 L K IQ + +D++ + G I +G R G + V I Sbjct: 65 LKVNKEIHAHYVRNAIQVEAGELDSVCKLAKEHGIAIYLGIMERAKNRGGHSIYCSLVYI 124 Query: 103 LDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV--FRDIRLGILICEDIW 154 + G I +V K+ P Y E+ T+ G N V ++ +G L C + W Sbjct: 125 NELGEIKSVHRKLQ-PTYD---ERLTWAPGDGNGLQVHPLKEFTVGGLNCWENW 174 >gi|303239219|ref|ZP_07325748.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Acetivibrio cellulolyticus CD2] gi|302593264|gb|EFL62983.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Acetivibrio cellulolyticus CD2] Length = 276 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 34/216 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------P 53 M +K+++ Q+ V+ D NI KA + E + + D+++ E+F Y Sbjct: 1 MDSTIKVSLCQMK-VIDDKDINIEKAIKMIETSAKNNADVVILPEMFNCPYDNSKFRAYA 59 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSV-VILDAGNIIAVR 112 E+LV K+ I++ S A K G P +E + N+ I D GN I Sbjct: 60 ENLVNGKT-IESISKAAREFKVHIIAGS------IPELAEEKLYNTCFAIDDNGNTIGRH 112 Query: 113 DKI-----NLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLK 164 K+ N+P EF E G ND I DI ++GI IC D+ + + + + Sbjct: 113 RKVHLFDVNIPGKIEFRESDMLAPG--ND-ITVVDIGCCKIGIAICYDV-RFPELFRLMA 168 Query: 165 KQGAEFL-----FSLNASPYYHNKLKKRHEIVTGQI 195 +GA+ + F++ P H +L R V Q+ Sbjct: 169 LKGAQMIVIPAAFNMTTGP-LHWELLMRARAVDNQV 203 >gi|291320347|ref|YP_003515609.1| tRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase [Mycoplasma agalactiae] gi|290752680|emb|CBH40653.1| TRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase [Mycoplasma agalactiae] Length = 374 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 28/107 (26%) Query: 291 NFHKVIIGLSGGIDSALCAAIAV--------------------DALGKENVQTIMLPYKY 330 N KVI+G+SGG+DS++CA + + D LG EN+ + P Sbjct: 3 NKKKVILGMSGGVDSSVCAYLLLKQGFEVEGLFMRNWDSMLNNDFLGNENISQDICP--- 59 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS-LMSQFLQEEPSG 376 Q +DA A LG K L D VN +++ + F+ E G Sbjct: 60 -QEQDYQDALKVANKLGIK---LHRVDFVNEYWNDVFKTFISEYEHG 102 >gi|257468725|ref|ZP_05632819.1| nitrilase (carbon-nitrogen hydrolase) [Fusobacterium ulcerans ATCC 49185] gi|317062980|ref|ZP_07927465.1| nitrilase [Fusobacterium ulcerans ATCC 49185] gi|313688656|gb|EFS25491.1| nitrilase [Fusobacterium ulcerans ATCC 49185] Length = 306 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 28/49 (57%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K KIA+ Q P++ D K + EEA + +LI+F ELFI GYP Sbjct: 7 KCKIAVVQAAPIMFDKQLCTEKTIKFIEEAAEKQSELIVFPELFIPGYP 55 >gi|255942671|ref|XP_002562104.1| Pc18g02620 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586837|emb|CAP94486.1| Pc18g02620 [Penicillium chrysogenum Wisconsin 54-1255] Length = 358 Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 17/171 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------- 52 +LKK K A P D+ ++ + +EA + G LI F EL+I GYP Sbjct: 4 VLKKYKAAAVNAEPGWFDLQESVRRTIHWIDEAGKAGCKLIAFPELWIPGYPYWAWKVNY 63 Query: 53 ----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS-VVILDAGN 107 P ++++ + + S + ++ + +G+ D + + ++I AG+ Sbjct: 64 QESLPLLKKYRENSLPSDSDEMRRIREAAKANKIWVSLGYSELDLASLYTTQIMISPAGD 123 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 +I R KI + E+ F G + D +G + + W+N N Sbjct: 124 VINHRRKIK----ATHVERLVFGDGTGDTTESVMDTEIGRIGHLNCWENMN 170 >gi|40890161|gb|AAR97425.1| nitrilase [uncultured organism] Length = 351 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 26/48 (54%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIA Q +PV D + KA R EA +QG LI+F E FI YP Sbjct: 8 FKIAAVQASPVFLDREATVEKACRLIAEAAKQGARLIVFPESFIPTYP 55 >gi|15675523|ref|NP_269697.1| NAD synthetase [Streptococcus pyogenes M1 GAS] gi|71911170|ref|YP_282720.1| NAD synthetase [Streptococcus pyogenes MGAS5005] gi|25090792|sp|Q99YK9|NADE_STRP1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|13622722|gb|AAK34418.1| putative NAD+ synthase [Streptococcus pyogenes M1 GAS] gi|71853952|gb|AAZ51975.1| NH(3)-dependent NAD(+) synthetase [Streptococcus pyogenes MGAS5005] Length = 274 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 32/227 (14%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K++F K ++G+SGG DS L +A A+ + + Y++ + P ++ Sbjct: 30 LKAYLRKHSFLKTYVLGISGGQDSTLAGKLAQMAIAELREEASDQAYQFIAVRLPYGVQA 89 Query: 338 DAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRGNIL 391 D A KAL + P L +N ++ Q + +G+ NI++R R Sbjct: 90 DEADAQKALAF---IAPDQTLTINIKAAVDGQVEALQAAGVEISDFNKGNIKARQRMISQ 146 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ ++ T + +E G+ T +GD PL L K R + Sbjct: 147 YAIAGQMAGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQGKALLK 197 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 198 VLGA-----DAALYEKVPTADLEDQKPGLADEVALGVTYQDIDDYLE 239 >gi|239813667|ref|YP_002942577.1| nitrilase [Variovorax paradoxus S110] gi|239800244|gb|ACS17311.1| Nitrilase [Variovorax paradoxus S110] Length = 339 Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 20/147 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 L K A Q PV D + K R +EA G L+ F E+F+S YP Sbjct: 4 LPHFKAAAVQTAPVFLDTNATVEKVVRLIDEAADHGAQLVAFPEVFVSAYPYWSWIGNPI 63 Query: 53 ---PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV---LNSVV-ILDA 105 P +S I+ I + +VVG + + GV N++V I D Sbjct: 64 QGSPWFEKLARSAIEIPGPEITEIAQAAARRCVNVVVGVNERSRFGVGTIYNTLVTIADD 123 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISG 132 G II K+ +P ++ EK T+ G Sbjct: 124 GRIIGRHRKL-VPTWA---EKLTWAPG 146 >gi|262306011|gb|ACY45598.1| gln amidotransferase [Argulus sp. Arg2] Length = 196 Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%) Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 C+ +RD V+ N KV++ LSGG+DS++CAA+ AL E V I Sbjct: 33 CIQYIRDIVKNN---KVMVLLSGGVDSSVCAALLHKALSPEQVIAI 75 >gi|15676432|ref|NP_273570.1| putative aluminum resistance protein [Neisseria meningitidis MC58] gi|81784948|sp|Q9K0Q9|QUEC_NEIMB RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|7225750|gb|AAF40955.1| putative aluminum resistance protein [Neisseria meningitidis MC58] gi|316985378|gb|EFV64326.1| queuosine biosynthesis protein queC [Neisseria meningitidis H44/76] gi|325139740|gb|EGC62274.1| exsB protein [Neisseria meningitidis CU385] gi|325200787|gb|ADY96242.1| exsB protein [Neisseria meningitidis H44/76] Length = 219 Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 13/94 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGVKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI-VAEN 381 L + SLM Q L ++ + I AEN Sbjct: 64 LDL--------SLMRQITHNALMDDTAAIETAEN 89 >gi|40890195|gb|AAR97442.1| nitrilase [uncultured organism] Length = 337 Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 22/171 (12%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---------- 52 + ++ A Q+ P + G + K ++A RQG+ LI+F E F+ YP Sbjct: 5 RIVRAAAVQIAPDLERPGGTLEKVLETIDDAARQGVQLIVFPETFLPYYPYFSFVRAPVA 64 Query: 53 --PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNII 109 E + + + G +V+G +D + N+ +I D G ++ Sbjct: 65 SGAEHMRLYDEAVVVPGPVTHAVAERARRHGMVVVLGVNERDHGSLYNAQLIFDTDGELL 124 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIV--FRDIRLGILICEDIWKNSN 158 R KI FHE+ + G + V R R+G L C W++ N Sbjct: 125 LKRRKIT----PTFHERMIWGMGDAAGLKVAETRIGRVGALAC---WEHYN 168 >gi|281203292|gb|EFA77492.1| nitrilase 2 [Polysphondylium pallidum PN500] Length = 367 Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 20/189 (10%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGG 81 NI AR+A EEA G ++I E F P VF + + + T+ +D Sbjct: 113 NIEAARKAIEEAASNGANIICLPECF--NCPYSTSVFNE-YAEKFGGPTTTMLADAAKRL 169 Query: 82 AGIVVG--FPRQDQEG-VLNSVVILD-AGNIIAVRDK-----INLPNYSEFHEKRTFISG 132 ++G P + +G + N I + +G ++ K IN+P F E G Sbjct: 170 KIWLIGGSIPERGDDGKIYNCSFIFNPSGELVGKHRKIHLFDINVPGKITFRESEILSPG 229 Query: 133 YSNDPIVFRD-IRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASPYYHNKLKK 186 + I D +RLG+ IC DI + + K+G + L F++ P H +L + Sbjct: 230 ETPTIIELGDGVRLGVGICYDI-RFPELAMLYAKEGCQILVYPGAFNMTTGP-AHWELLQ 287 Query: 187 RHEIVTGQI 195 R V Q+ Sbjct: 288 RGRAVDNQV 296 >gi|222153530|ref|YP_002562707.1| NAD synthetase [Streptococcus uberis 0140J] gi|254766719|sp|B9DV66|NADE_STRU0 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|222114343|emb|CAR43052.1| NH(3)-dependent NAD(+) synthetase [Streptococcus uberis 0140J] Length = 274 Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 42/232 (18%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKENVQ------TIMLPYKYTS 332 L+ Y+ K+ F K +++G+SGG DS L A +AV+ L +E I LPY + Sbjct: 30 LKAYLLKHPFLKTLVLGISGGQDSTLAGRLAQLAVEELRQETGDQSYRFIAIRLPYGVQA 89 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSGIVAE-----NIQSRI 386 D A KAL + P L +N ++ Q + +GI NI++R Sbjct: 90 -----DEADAQKALAF---IRPDQTLTINIKAAVDGQVEALKAAGIEITDFNKGNIKARQ 141 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R A++ + ++ T + +E G+ T +GD PL L K R Sbjct: 142 RMISQYAVAGQTSGAVIGTDHAAENITGFFTKFGDGGADILPLFRLNK---------RQG 192 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + +G S+ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 193 KALLREMGA-----DASLYEKVPTADLEENKPGLADEVALGVTYNDIDDYLE 239 >gi|257899676|ref|ZP_05679329.1| NAD synthase [Enterococcus faecium Com15] gi|257837588|gb|EEV62662.1| NAD synthase [Enterococcus faecium Com15] Length = 274 Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 33/216 (15%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIA-------VDALGKENVQTIMLPYKYTSPQ 334 ++ Y++K F K ++G+SGG DS L +A + E+ Q I + Y Sbjct: 30 MKTYLKKYPFLKTFVLGISGGQDSTLAGRLAQLTMEEMREETKDESYQFIAVRLPYGEQA 89 Query: 335 SLEDAAAC----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 EDA A + + ++ P D S + + G NI++R R Sbjct: 90 DEEDAKAALDFIQPDVSLRVNIKPAVDAQVQVLSEAGVEISDFNKG----NIKARQRMIT 145 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +L T + +E G+ T +GD PL L K Q QL N+ Sbjct: 146 QYAVAGERAGAVLGTDHAAENITGFFTKFGDGGADILPLFRLNKRQGKQLLQALNA---- 201 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 P + K P+A+L +P D+ +L Sbjct: 202 ----------PEKLYTKIPTADLEDGKPMIADEVAL 227 >gi|188533987|ref|YP_001907784.1| NAD synthetase [Erwinia tasmaniensis Et1/99] gi|238689735|sp|B2VEK0|NADE_ERWT9 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|188029029|emb|CAO96897.1| NH(3)-dependent NAD(+) synthetase [Erwinia tasmaniensis Et1/99] Length = 275 Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 40/261 (15%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y+++ F K +++G+SGG DS L + A+ + ++ Y++ + P ++ Sbjct: 30 LKSYLKRYPFLKSLVLGISGGQDSTLTGKLCQMAMTELRAESGDSDYQFIAVRLPHGVQA 89 Query: 338 DAAACAKALG-CKYD-VLPIHDLVNHFFSLMSQFLQEEP---SGIVAENIQSRIRGNILM 392 D C A+ + D VL ++ + Q L+E S + N ++R R + Sbjct: 90 DEQDCQDAITFIQPDRVLTVN--IKAAVQASEQALREAGITLSDFIRGNEKARERMKVQY 147 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 +++ + +++ T + +E G+ T YGD NP+ L K Q +L + Sbjct: 148 SIAGMNAGVVVGTDHAAEAVTGFFTKYGDGGTDINPIFRLNKGQGKRL---------LNA 198 Query: 453 LGPLTEVIPPSILEKSPSAEL---RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE 509 LG P + K P+A+L RP D+ +L + ++I R ++ E Sbjct: 199 LG-----CPEHLWLKHPTADLEDDRPGLQDEVAL---GVTYEMIDRYLQGE--------S 242 Query: 510 YNDETVRYVEHLLYGSEYKRR 530 + + +E +E+KRR Sbjct: 243 IDPAAAKIIEGWYVKTEHKRR 263 >gi|322373844|ref|ZP_08048379.1| NAD+ synthetase [Streptococcus sp. C150] gi|321277216|gb|EFX54286.1| NAD+ synthetase [Streptococcus sp. C150] Length = 273 Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 39/230 (16%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALC---AAIAVDALGKENVQ-----TIMLPYKYTSP 333 L+ Y+ K+ F K ++G+SGG DS L A +AV+ L E + I LPY Sbjct: 30 LKAYMLKHPFLKTYVLGISGGQDSTLAGRLAQLAVEELRAETGKDYQFIAIRLPY---GV 86 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 Q+ ED A A A K DV VN ++ Q + +G+ NI++R R Sbjct: 87 QADEDDAQHALAF-IKPDV---SLAVNIKEAVDGQVAELAKAGVSISDFNKGNIKARQRM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ + ++ T + +E G+ T +GD PL L K R Sbjct: 143 ITQYAVAGENSGAVIGTDHAAENLTGFFTKFGDGGADILPLFRLNK---------RQGAA 193 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + + LG ++ EK P A+L RP D+ +L Y +DD ++ Sbjct: 194 LLAELGA-----DKALYEKVPIADLEEDRPGIADEVALGVTYREIDDYLE 238 >gi|291522440|emb|CBK80733.1| preQ(0) biosynthesis protein QueC [Coprococcus catus GD/7] Length = 225 Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 9/95 (9%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++ SGG+DS C +AVD G +NV + + Y + +E AKA+ Y V Sbjct: 2 KALVLSSGGVDSTTCLGLAVDKYGSDNVIALAITYGQRHTKEIE----AAKAVAAYYHVE 57 Query: 354 PIH-DLVNHF----FSLMSQFLQEEPSGIVAENIQ 383 +H DL F SL+S Q P AE +Q Sbjct: 58 MLHLDLTPIFQYSDCSLLSHSDQAIPEESYAEQLQ 92 >gi|16273113|ref|NP_439347.1| hypothetical protein HI1191 [Haemophilus influenzae Rd KW20] gi|1574118|gb|AAC22844.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] Length = 196 Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKEN++ I Y LE A A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQDLGIK 66 >gi|309389441|gb|ADO77321.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Halanaerobium praevalens DSM 2228] Length = 318 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 KK K+A+ Q PV+ D A I K +A G ++++F E FI Y P L FK Sbjct: 7 KKAKVAVVQAAPVIMDQAKTITKLESLAIKAAEAGAEIVVFPEAFIPAY-PRGLSFK 62 >gi|195421692|ref|XP_002060885.1| GK20203 [Drosophila willistoni] gi|194156970|gb|EDW71871.1| GK20203 [Drosophila willistoni] Length = 423 Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 4/133 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+ +A++ LN D GN+A+ ++ EA G EL + GY ED F++ Sbjct: 1 MGRKITVAVSTLNQWALDFEGNLARILQSILEAKDMGASYRTGPELEVCGYSCEDH-FRE 59 Query: 61 --SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + + ++ + S + + VG P + N V + ++ +R K+ L Sbjct: 60 PDTFLHSWETLLEIMMSPICENML-VDVGMPVMHRNVAYNCRVAFFSRQLLLIRPKMALC 118 Query: 119 NYSEFHEKRTFIS 131 + E R F + Sbjct: 119 VDGNYRESRWFTA 131 >gi|312881833|ref|ZP_07741604.1| asparagine synthase (glutamine-hydrolyzing) [Vibrio caribbenthicus ATCC BAA-2122] gi|309370479|gb|EFP97960.1| asparagine synthase (glutamine-hydrolyzing) [Vibrio caribbenthicus ATCC BAA-2122] Length = 610 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 11/87 (12%) Query: 287 VQKNNFHKVIIG--LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 +Q +V +G LSGG+DS+L AIA N++T + +K LE A AK Sbjct: 248 IQSRLLAEVPVGTMLSGGLDSSLVTAIAQKQGKIHNLKTFSIGFKDAEFSELEYARKLAK 307 Query: 345 ALGC---KYDVLP------IHDLVNHF 362 LG Y + P HDLV HF Sbjct: 308 DLGTDHYDYTIEPEEAIQAAHDLVKHF 334 >gi|146338851|ref|YP_001203899.1| N-carbamoyl-D-amino acid hydrolase [Bradyrhizobium sp. ORS278] gi|146191657|emb|CAL75662.1| N-carbamoyl-D-amino acid hydrolase (D-N-alpha-carbamilase) [Bradyrhizobium sp. ORS278] Length = 308 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 27/174 (15%) Query: 2 LKKLKIAIAQLNPV--VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE----- 54 ++ + +A AQ+ P+ +A+ +EA +G DLI++ EL ++ + P Sbjct: 1 MRIINVAAAQMGPIQRADSREAVVARMIALLDEAKHKGADLIVYPELALTTFFPRWYMED 60 Query: 55 ----DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILD-AGNI 108 D F++ A A+ L + +G+ +G N+ V+ D + NI Sbjct: 61 QAEVDTWFERDMPNA---AVQPLFDRAAQHEIAMYLGYAELTLDGHHYNTAVLTDRSSNI 117 Query: 109 IAVRDKINLPNYSEFH--------EKRTFISGYSNDPIVFRDIR--LGILICED 152 + K++LP + EF EKR F G P V+R++ +G+ IC D Sbjct: 118 VGKYRKVHLPGHEEFEPERSHQHLEKRYFEPGDLGFP-VWRNLGGIVGMAICND 170 >gi|40890151|gb|AAR97420.1| nitrilase [uncultured organism] Length = 337 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 25/48 (52%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KIA+ Q PV D + KA EA +G L+ F E+FI GYP Sbjct: 6 FKIAVVQAAPVFLDAKATVDKAIGLMAEAGAKGAKLLAFPEVFIPGYP 53 >gi|87301479|ref|ZP_01084319.1| aliphatic nitrilase [Synechococcus sp. WH 5701] gi|87283696|gb|EAQ75650.1| aliphatic nitrilase [Synechococcus sp. WH 5701] Length = 335 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 24/187 (12%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PE 54 M + +A AQ+ PV+ + G++A+ A EA + LI+F E F+ YP P Sbjct: 1 MEAPIVVAAAQIRPVLHSLDGSLARVLEAMAEAAAASVQLIVFPETFLPYYPYFSFIEPP 60 Query: 55 DLVFKKSFI---QAC---SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS-VVILDAGN 107 L+ + + QA AID + +++G +D + N+ ++I D G Sbjct: 61 VLMGRSHLLLYEQAVVVPGPAIDRIAEAARRHRMYVLLGINERDGGSLYNAQLLIDDTGT 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKH--L 163 ++ R KI P Y HE+ + G V R+G L C W++ N L Sbjct: 121 VLLKRRKIT-PTY---HERMVWGQGDGAGLTVVPTSLGRVGALAC---WEHYNPLARFSL 173 Query: 164 KKQGAEF 170 QG E Sbjct: 174 MAQGEEI 180 >gi|40890201|gb|AAR97445.1| nitrilase [uncultured organism] Length = 314 Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 ++ + +AQ PV D + KAR EA +G+DL+ F E +++GYP Sbjct: 6 EVTLGVAQAAPVYFDREASTEKARGLIREAGEKGVDLLAFGETWLTGYP 54 >gi|332358043|gb|EGJ35876.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK1056] Length = 274 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 42/247 (17%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PNIDPEEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQMAVEEMRTETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL-VNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + P L VN S + E +G Sbjct: 75 SYRFIAVRLPY---GVQADEDDAQKALAF-----IQPDVSLTVNIKESADAMTRAVEATG 126 Query: 377 IVAE-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 NI++R R AL+ ++ T + +E + T +GD PL Sbjct: 127 ATVSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYR 186 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYP 487 L K Q Q + LG P++ EK P+A+L +P D+ +L Y Sbjct: 187 LNKRQGKQF---------LAALGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYN 232 Query: 488 ILDDIIK 494 +DD ++ Sbjct: 233 EIDDYLE 239 >gi|260886986|ref|ZP_05898249.1| PP-loop family protein [Selenomonas sputigena ATCC 35185] gi|330839229|ref|YP_004413809.1| Conserved hypothetical protein CHP00268 [Selenomonas sputigena ATCC 35185] gi|260863048|gb|EEX77548.1| PP-loop family protein [Selenomonas sputigena ATCC 35185] gi|329746993|gb|AEC00350.1| Conserved hypothetical protein CHP00268 [Selenomonas sputigena ATCC 35185] Length = 278 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (47%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 ++ + LSGG+DSA+ AV LG +V + + + LEDA CA G Sbjct: 21 QSYGSAAVALSGGVDSAVLLMAAVRTLGAAHVAAVTAASELLAEGELEDAKRCASLAGVP 80 Query: 350 YDVLPIHDLVN 360 +LP DL + Sbjct: 81 LTILPADDLAS 91 >gi|260439288|ref|ZP_05793104.1| hydrolase, carbon-nitrogen family [Butyrivibrio crossotus DSM 2876] gi|292808299|gb|EFF67504.1| hydrolase, carbon-nitrogen family [Butyrivibrio crossotus DSM 2876] Length = 279 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 6/149 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 K+AI Q + I NI A +EA+ D++L E F++GY + ++KS I Sbjct: 2 FKVAILQKRAIHVQIDENIESIIMAMKEASENHADILLLPECFVTGYDLP-MTYEKS-IA 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSEF 123 I + + G+V+ + + NS ++D +G I+ K++ +F Sbjct: 60 DDDIRITKICENAEKYKIGVVLTAFTKGHKQPQNSAFVIDKSGKILMKYSKVHT---CDF 116 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICED 152 ++R G F I+LGI+IC D Sbjct: 117 ADERNVEPGKEFKVCDFEGIQLGIMICYD 145 >gi|311745990|ref|ZP_07719775.1| hydrolase, carbon-nitrogen family [Algoriphagus sp. PR1] gi|126576203|gb|EAZ80481.1| hydrolase, carbon-nitrogen family [Algoriphagus sp. PR1] Length = 319 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 10/86 (11%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP----------P 53 +LK+A+AQ++PV D + K + +A R+ +LI+F E + GYP Sbjct: 6 QLKVALAQISPVWLDKQATLEKVKSKIMDAARENCELIIFGEGLLPGYPFWLAITNGAAW 65 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHD 79 +D V K+ +A+ K D H+ Sbjct: 66 DDPVQKEIHAHYLRNAVQIEKGDLHE 91 >gi|7573371|emb|CAB87677.1| putative protein [Arabidopsis thaliana] Length = 318 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 28/209 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K I + QL+ V D NI+ A++A EEA +G L+L E++ S Y + I Sbjct: 25 KFNIGLCQLS-VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYSNDSFPVYAEEI 83 Query: 64 QAC--SSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKINL- 117 A +S + S+ ++G P + + + N+ + + G + A KI+L Sbjct: 84 DAGGDASPSTAMLSEVSKRLKITIIGGSIPERVGDRLYNTCCVFGSDGELKAKHRKIHLF 143 Query: 118 ----PNYSEFHEKRTFISGYSND----------PIVFRDI-RLGILICEDIWKNSNICKH 162 P F E +T +G + P + D+ R+GI IC DI + + Sbjct: 144 DIDIPGKITFMESKTLTAGETPTIVDTGYNLGLPNIIPDVGRIGIGICYDI-RFQELAMI 202 Query: 163 LKKQGAEFL-----FSLNASPYYHNKLKK 186 +GA L F++ P + L++ Sbjct: 203 YAARGAHLLCYPGAFNMTTGPLHWELLQR 231 >gi|322378631|ref|ZP_08053067.1| carbon-nitrogen hydrolase [Helicobacter suis HS1] gi|322379883|ref|ZP_08054169.1| carbon-nitrogen hydrolase [Helicobacter suis HS5] gi|321147678|gb|EFX42292.1| carbon-nitrogen hydrolase [Helicobacter suis HS5] gi|321148938|gb|EFX43402.1| carbon-nitrogen hydrolase [Helicobacter suis HS1] Length = 299 Score = 40.0 bits (92), Expect = 1.00, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 18/157 (11%) Query: 81 GAGIVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSN--- 135 G +V + EGV N+ V+ + G ++ + K+++P+ F+EK F G + Sbjct: 84 GVVLVSSLFEKRMEGVYHNTAVVFEKDGRVLGKQRKMHIPDDPRFYEKFYFTPGDATKGF 143 Query: 136 DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN--------KLKKR 187 +PI+ LG+LIC D W + + + A+ L +A ++++ +L+K+ Sbjct: 144 EPIMSSVGNLGVLICWDQW-YPEAARIMALKKADVLIYPSAIGWFNDTSESIEEKQLQKQ 202 Query: 188 --HEIVTGQ-ISHVHLPIIYVNQVGGQDELIFDGASF 221 + G IS+V +P+I N+VG + +L +G F Sbjct: 203 AWQGVQKGHSISNV-IPVITSNRVGLEKDLYTEGLYF 238 >gi|293391376|ref|ZP_06635710.1| ExsB protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951910|gb|EFE02029.1| ExsB protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 276 Score = 40.0 bits (92), Expect = 1.00, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 32/68 (47%) Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 ++ N +K ++ SGG DS C +A+ G ENV+ I Y LE A A+ Sbjct: 43 FIMSNQPNKALVIFSGGQDSTTCLFLAMQEFGAENVEVITFQYGQRHAIELEKARWIAQD 102 Query: 346 LGCKYDVL 353 L K VL Sbjct: 103 LKVKQTVL 110 >gi|190150422|ref|YP_001968947.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263765|ref|ZP_07545371.1| Queuosine biosynthesis protein queC [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|254764292|sp|B3H1X8|QUEC_ACTP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|189915553|gb|ACE61805.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870886|gb|EFN02624.1| Queuosine biosynthesis protein queC [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 222 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K ++ SGG DS C A+ G ENV+ + Y LE AA AK LG K Sbjct: 2 NSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLGVK 61 >gi|145633079|ref|ZP_01788811.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 3655] gi|144986305|gb|EDJ92884.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 3655] Length = 227 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKENV+ I Y LE A A + LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARAITQDLGIK 66 >gi|37676345|ref|NP_936741.1| amidohydrolase [Vibrio vulnificus YJ016] gi|37200887|dbj|BAC96711.1| predicted amidohydrolase [Vibrio vulnificus YJ016] Length = 266 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 19/232 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + I++AQ+ V GDI N+A+ E + D+++F EL ++GY DL + Sbjct: 19 MNAAITISLAQIPVVRGDIPSNLAQHIYMIERSAEHDADVVVFPELSLTGYEL-DLANEL 77 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD-KINLPN 119 + + S I L + + ++ G P + + ++ G +I D ++ L + Sbjct: 78 ALLPEAES-IQLLSQASVEHHVIVISGCPLRHDDAAKPTI-----GAVICFPDGRVELYD 131 Query: 120 YSEFHEKRT-FISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--SLN 175 HE F S S+D + ++ ++ + IC D + ++ + K GA+ +L Sbjct: 132 KQYLHEGEAQFCSSGSSDYVFNVKEQQIALAICAD-FTHAEHAQRAKALGADLYLVSALI 190 Query: 176 ASPYYHNKLKKRHEIVTGQISHVH-LPIIYVNQVGGQDELIFDGASFCFDGQ 226 + Y K + I+ VH LP++ N + + G S ++ Q Sbjct: 191 SDNGYETDAK-----ILSDIASVHALPVLLSNHISQTGGWVTCGKSSIWNAQ 237 >gi|126208569|ref|YP_001053794.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae L20] gi|189038888|sp|A3N1A3|QUEC_ACTP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|126097361|gb|ABN74189.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 222 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K ++ SGG DS C A+ G ENV+ + Y LE AA AK LG K Sbjct: 2 NSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLGVK 61 >gi|40890271|gb|AAR97480.1| nitrilase [uncultured organism] Length = 334 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 25/167 (14%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 K K+A+ Q PV D ++AKA +EA G L+ F E++I GYP + ++ Sbjct: 5 KFKVAVVQAAPVFMDAPASVAKAIGFIQEAGAAGAKLLAFPEVWIPGYPWWLWLGTPAWG 64 Query: 63 -----------IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIA 110 ++A I L + + +V+GF D + L+ V I DAG II Sbjct: 65 MQFVPRYHANSLRADGPEILALCAAAAEAKINVVMGFSEIDGGTLYLSQVFISDAGKIIF 124 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICED 152 R K+ P + E+ F G +D FR + RLG L C + Sbjct: 125 KRRKLK-PTHV---ERTLFGEGDGSD---FRVVDSSVGRLGALCCAE 164 >gi|32035296|ref|ZP_00135303.1| COG0603: Predicted PP-loop superfamily ATPase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|303250158|ref|ZP_07336360.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307246013|ref|ZP_07528095.1| Queuosine biosynthesis protein queC [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307259430|ref|ZP_07541155.1| Queuosine biosynthesis protein queC [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|302651221|gb|EFL81375.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852948|gb|EFM85171.1| Queuosine biosynthesis protein queC [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306866366|gb|EFM98229.1| Queuosine biosynthesis protein queC [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 222 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K ++ SGG DS C A+ G ENV+ + Y LE AA AK LG K Sbjct: 2 NSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLGVK 61 >gi|239815523|ref|YP_002944433.1| nitrilase [Variovorax paradoxus S110] gi|239802100|gb|ACS19167.1| Nitrilase [Variovorax paradoxus S110] Length = 350 Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KL++A Q PV D+ G I K +A QG+ LI F E ++ GYP Sbjct: 8 KLRVAAVQAAPVFLDLDGTIDKTIDLMAQAAGQGVKLIAFPETWVPGYP 56 >gi|302185459|ref|ZP_07262132.1| NAD synthetase [Pseudomonas syringae pv. syringae 642] Length = 275 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 +++ +Q +++G+SGG+DS +A A+ + T + LPY + Sbjct: 35 IKECLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRESTGDNAYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPATSVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYHGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|255292220|dbj|BAH89344.1| nitrilase [uncultured bacterium] gi|255292247|dbj|BAH89370.1| nitrilase [uncultured bacterium] gi|255292275|dbj|BAH89397.1| nitrilase [uncultured bacterium] gi|255292351|dbj|BAH89471.1| nitrilase [uncultured bacterium] gi|255292592|dbj|BAH89703.1| nitrilase [uncultured bacterium] gi|255292809|dbj|BAH89911.1| nitrilase [uncultured bacterium] Length = 313 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 59/225 (26%), Positives = 93/225 (41%), Gaps = 32/225 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKAR--RAREEANRQGMDLILFTELFISGYPP----E 54 M + +K A AQ+ P+ + A +R EA +G +L++F EL + + P E Sbjct: 1 MSRIVKAASAQMGPIPKSQSRKQAVSRLVAMMREAKGRGAELVVFPELAFTTFFPRWMIE 60 Query: 55 DLVFKKSFIQACSSAIDT--LKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDA-GN 107 D S+ + +T L ++ G G V + EG N+ +I+D G Sbjct: 61 DEAELDSYYETAMPGPETAPLFEESKKLGVGFYVSYAELVNEGGRRRRFNTSIIVDRNGE 120 Query: 108 IIAVRDKINLPNYSEFH--------EKRTFISGYSNDPI--VFRDIRLGILICED-IWKN 156 I+ K++LP +SE EKR F G + F + +G+ IC D W Sbjct: 121 IVGKYRKVHLPGHSEPQPGRVHQHLEKRYFEPGNLGFGVWRAFGGV-MGMCICNDRRWPE 179 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQIS-HVHL 200 + L QG E + +P+ H H + G S H HL Sbjct: 180 TYRVMGL--QGVEMVMLGYNTPFDHTG----HADIDGLTSFHNHL 218 >gi|149911801|ref|ZP_01900405.1| NAD(+) synthetase [Moritella sp. PE36] gi|149805147|gb|EDM65169.1| NAD(+) synthetase [Moritella sp. PE36] Length = 278 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 42/236 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKE------NVQTIMLPYKYTSP 333 ++ + + +++G+SGG+DS+ C +A++ L E N + LPY + Sbjct: 31 IKQQLTNSGLKSLVLGISGGVDSSTCGRLCQLAIEELNTEHSNDDYNFIAVRLPYSVQAD 90 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----------NI 382 + +DA + K V ++ + S+ ++ L+ + + E N+ Sbjct: 91 E--DDAQKALHFINPKTSV--TVNIQSGADSIHAEVLKSVKAAGLPESTAFNQDFNKGNV 146 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 ++R+R ++ + ++ T + +E G+ T +GD + PL L K QV LA Sbjct: 147 KARMRMIAQYEIAGLYRGLVPGTDHSAENISGFFTKHGDGACDLAPLFGLNKRQVRALA- 205 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 LG P + +K P+A+L RP D+ +L Y +DD ++ Sbjct: 206 --------ESLGA-----PQEVYQKIPTADLEEDRPQLEDEVALGVTYDQIDDFLE 248 >gi|66043861|ref|YP_233702.1| NAD synthetase [Pseudomonas syringae pv. syringae B728a] gi|81308568|sp|Q4ZYV8|NADE_PSEU2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|63254568|gb|AAY35664.1| NAD+ synthase [Pseudomonas syringae pv. syringae B728a] gi|330899916|gb|EGH31335.1| NAD synthetase [Pseudomonas syringae pv. japonica str. M301072PT] gi|330971581|gb|EGH71647.1| NAD synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 275 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 +++ +Q +++G+SGG+DS +A A+ + T + LPY + Sbjct: 35 IKECLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRESTGDNAYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPATSVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ +++ T + +E +G+ T +GD + PL L K QV +A + Sbjct: 154 YTVAGAYHGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|323489884|ref|ZP_08095107.1| NAD synthetase [Planococcus donghaensis MPA1U2] gi|323396453|gb|EGA89276.1| NAD synthetase [Planococcus donghaensis MPA1U2] Length = 275 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 40/246 (16%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAI---AVDALGKENVQT 323 P E + + + L+DY++++ F K ++G+SGG DS L + A+D L +E+ Sbjct: 16 PTIEPKEEIERTIQFLKDYLKRHTFLKGYVLGISGGQDSTLLGKLTQMAIDQLNEESGSN 75 Query: 324 IMLPYKYTSPQSLE-DAAACAKALG----CKYDVLPIHDLVNHFFSLMSQFLQE---EPS 375 Y P ++ D A+ K + I V+ Q L+E E + Sbjct: 76 DYAFYAVRLPYGVQLDEHDAKDAMNFIQPTKLYTVNIKGAVD----ASEQALKEAGIELT 131 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 N ++R R +++ + +L T + +E G+ T +GD + PL L K Sbjct: 132 DFAKGNEKARERMKAQYSIAAMHSSAVLGTDHAAEAITGFYTKFGDGAADLTPLFRLNK- 190 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-------PYPI 488 R + LG P + K P+A+L + D+ +LP Y + Sbjct: 191 --------RQGKAMLQELGS-----PEHLYLKVPTADL---EEDKPALPDEVALGVTYKL 234 Query: 489 LDDIIK 494 +DD ++ Sbjct: 235 IDDYLE 240 >gi|294896038|ref|XP_002775374.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239881563|gb|EER07190.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 286 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 49/216 (22%), Positives = 80/216 (37%), Gaps = 35/216 (16%) Query: 44 TELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL 103 +EL +SGY ED + C ++ + + T D + +G P + N V L Sbjct: 7 SELELSGYGCEDHFLETDTFHHCWESLAHIITATSDLDMLLDIGMPALFKSTGYNCRVFL 66 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISG---------------YSNDPIVFR------- 141 G ++ VR K+ L + + E R F P+ R Sbjct: 67 YRGRVLLVRPKMLLADDGNYRESRWFAPWPMERGLEEMLLPDVVREAQPVDIRQQTCPFG 126 Query: 142 -------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQ 194 D +G CE++W N + G + + + + S + KLKKR +++ G Sbjct: 127 FGVVQLADCAVGCEACEELWAPENPHTIMALDGVDIIANGSGSHHELRKLKKRLKLIAGA 186 Query: 195 ISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 S +Y N +G DG FDG +A Sbjct: 187 TSKSGGVYLYANSMG------CDGGRLYFDGSSLIA 216 >gi|291295360|ref|YP_003506758.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Meiothermus ruber DSM 1279] gi|290470319|gb|ADD27738.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Meiothermus ruber DSM 1279] Length = 255 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 10/149 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ L + + KA +A++QG + + ELF SGY D F Sbjct: 1 MKVALVHLA-TLETPEATLQKALELLSQAHQQGAKVAVLPELFPSGYRFADAAF------ 53 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S + L+ G +V G Q N ++ ++A K +L F Sbjct: 54 -TPSVLARLEQFCAQTGLSVVAGVLEQAGPRHANRARVVGPAGVLATYTKTHL--IPAFG 110 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDI 153 E T I G + ++G+ IC D+ Sbjct: 111 EPETMIPGQELVTLELEGFKVGLAICFDL 139 >gi|145635040|ref|ZP_01790746.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae PittAA] gi|229844854|ref|ZP_04464992.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 6P18H1] gi|145267648|gb|EDK07646.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae PittAA] gi|229812235|gb|EEP47926.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 6P18H1] gi|309973345|gb|ADO96546.1| Probable 7-cyano-7-deazaguanine (preQ0) synthesis protein QueC [Haemophilus influenzae R2846] Length = 227 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKENV+ I Y LE A A + LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARAITQDLGIK 66 >gi|324991755|gb|EGC23687.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK353] Length = 274 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 38/240 (15%) Query: 273 EADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT-------- 323 E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 20 EEEIRKSVDFLKAYLKKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDDSYRFI 79 Query: 324 -IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSGIV--- 378 + LPY Q+ ED A A A + DV L ++ + M++ ++ + + Sbjct: 80 AVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTKAVEATGAKVSDFN 133 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 NI++R R AL+ ++ T + +E + T +GD PL L K Q Sbjct: 134 KGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLNKRQGK 193 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 QL + LG P++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 194 QL---------LATLGA-----DPALYEKVPTADLEEEKPGIADEVALGVTYNEIDDYLE 239 >gi|284045342|ref|YP_003395682.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Conexibacter woesei DSM 14684] gi|283949563|gb|ADB52307.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Conexibacter woesei DSM 14684] Length = 315 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +IA QL P D A + + RR +A G +L++F EL + GYP Sbjct: 3 RIATVQLEPSYMDPAAGLERIRRFTADAAADGAELVVFPELLVPGYP 49 >gi|206559745|ref|YP_002230509.1| (R)-stereoselective amidase [Burkholderia cenocepacia J2315] gi|198035786|emb|CAR51677.1| (R)-stereoselective amidase [Burkholderia cenocepacia J2315] Length = 273 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 31/257 (12%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFKKSF 62 KLK+ I QL GD N+ + A G DL++F E ++G+ P +L Sbjct: 2 KLKLDIVQLAGRDGDTPTNLRRTLEAIATCA-PGTDLVMFPEAQLTGFLDPSNLAELAEP 60 Query: 63 IQACS--SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + S + I ++ G++ ++ G + + N IA+R Y Sbjct: 61 LDGSSVGAVIAAARARDVAVVVGLI-----ENDGGRFYNTTVFVTPNGIALR-------Y 108 Query: 121 SEFH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL-- 174 + H E + G + +R +R+G+LIC D + + L GA+ + Sbjct: 109 RKTHLWVSEHGVVLPGDRYATVEWRGVRIGLLICYD-SEFPETGRALAALGAQLILVTDG 167 Query: 175 NASPYYHNKLKKRHEI-VTGQISHVHLPIIYVNQV-GGQDELIFDGASFCFDGQQQLAFQ 232 N PY + H VT + + N+V GG +++F G S D L F+ Sbjct: 168 NMEPY-----RNVHRTSVTARAMENQVFAAVANRVGGGSHDVVFAGGSLAVDPFGNLIFE 222 Query: 233 MKHFSEQNFMTEWHYDQ 249 + +E E +DQ Sbjct: 223 AGN-TESRHAIELDFDQ 238 >gi|88603768|ref|YP_503946.1| GMP synthase subunit B [Methanospirillum hungatei JF-1] gi|88189230|gb|ABD42227.1| GMP synthase (glutamine-hydrolyzing) [Methanospirillum hungatei JF-1] Length = 305 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 22/166 (13%) Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP-YKYTSPQSLEDAAACAKAL 346 +++N KV+I LSGG+DS++CA +A A+G+ ++P Y T + ++ Sbjct: 17 EESNGEKVVIALSGGVDSSVCAELASRAIGER-----LIPIYVDTGLMRKGETKRISEIF 71 Query: 347 GCKYDVLPIHDLVNHFF-SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 G + L + + + F +L + E+ IV E IR A + ++ +L T Sbjct: 72 G--HLGLKVVNAADEFLDALEGESDPEKKRKIVGERF---IRVFEREATATGAQYLLQGT 126 Query: 406 ----------SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 KS +VG L G PL+DLYK +V ++A Sbjct: 127 IYPDCIESEGGIKSHHNVGGLPLTMQFQGVIEPLRDLYKDEVREVA 172 >gi|40890329|gb|AAR97509.1| nitrilase [uncultured organism] Length = 337 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 19/165 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP----EDL 56 M + +K+A Q P+ D+ + K EEA R LI F E +I GYP + Sbjct: 1 MKEAIKVACVQAAPIYMDLEATVDKTIELMEEAARNNARLIAFPETWIPGYPWFLWLDSP 60 Query: 57 VFKKSFIQAC---SSAIDTLKSDTHDGGA---GIVVGFPRQDQEG---VLNSVVILDAGN 107 + F++ S +D ++ A GI+V ++ G ++ I D G+ Sbjct: 61 AWAMQFVRQYHENSLELDGPQAKRISDAAKRLGIMVTLGMSERVGGTLYISQWFIGDNGD 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILIC 150 I R K+ F E+ F G + VF RLG L C Sbjct: 121 TIGARRKLK----PTFVERTLFGEGDGSSLAVFETSVGRLGGLCC 161 >gi|17228781|ref|NP_485329.1| hypothetical protein alr1286 [Nostoc sp. PCC 7120] gi|17130633|dbj|BAB73243.1| alr1286 [Nostoc sp. PCC 7120] Length = 275 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + +I SGG+DS L A IA DALG + + P+ LEDA A +G + ++ Sbjct: 18 QALIAYSGGVDSTLVAKIAYDALGDRALAVTAVSPSLL-PEELEDAKIQAATIGISHKIV 76 Query: 354 PIHDLVNHFFS 364 +++ N ++ Sbjct: 77 QTYEMDNPNYT 87 >gi|294871478|ref|XP_002765951.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239866388|gb|EEQ98668.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 735 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 16/104 (15%) Query: 380 ENIQSRIR---GNILMALSNHSKA-----MLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 +NIQ+R R +L L H++ ++L+T N E GY T Y SG NP+ Sbjct: 515 QNIQARSRMVMSFMLAQLLPHARRRGGYLLVLSTGNVDEALRGYLTKYDCSSGDINPIGS 574 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 + K + W +++ G L E++ E P+AELRP Sbjct: 575 ISKGDLKSFLVWASTN---LGYPALAEIV-----EAPPTAELRP 610 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 54/253 (21%), Positives = 91/253 (35%), Gaps = 35/253 (13%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A L+ D GN + + A+ + EL +SGY ED + C Sbjct: 9 VATCNLDQWALDFDGNERRVIESIRIAHEKNAKFRTGPELELSGYGCEDHFLETDTFHHC 68 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 ++ + + T + + +G P + N V L G ++ VR K+ L + + E Sbjct: 69 WESLAHIITATSNLDMLLDIGMPALFKSTGYNCRVFLYRGRVLLVRPKMLLADDGNYRES 128 Query: 127 RTFISG---------------YSNDPIVFR--------------DIRLGILICEDIWKNS 157 R F P+ R D +G CE++W Sbjct: 129 RWFAPWPMERGLEEMLLPDIVREAQPVDIRQQSCPFGFGVVQLADCAVGCEACEELWAPE 188 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 N + G + + + + S + KLKKR +++ G S +Y N +G D Sbjct: 189 NPHTIMALDGVDIIANGSGSHHELRKLKKRLKLIAGATSKSGGVYLYANSMG------CD 242 Query: 218 GASFCFDGQQQLA 230 G FDG +A Sbjct: 243 GGRLYFDGSSLIA 255 >gi|227552523|ref|ZP_03982572.1| NAD(+) synthase [Enterococcus faecium TX1330] gi|257888243|ref|ZP_05667896.1| NAD synthase [Enterococcus faecium 1,141,733] gi|257896868|ref|ZP_05676521.1| NAD synthase [Enterococcus faecium Com12] gi|293378503|ref|ZP_06624666.1| NAD+ synthetase [Enterococcus faecium PC4.1] gi|227178373|gb|EEI59345.1| NAD(+) synthase [Enterococcus faecium TX1330] gi|257824297|gb|EEV51229.1| NAD synthase [Enterococcus faecium 1,141,733] gi|257833433|gb|EEV59854.1| NAD synthase [Enterococcus faecium Com12] gi|292642832|gb|EFF60979.1| NAD+ synthetase [Enterococcus faecium PC4.1] Length = 274 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 33/216 (15%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALCAAIA-------VDALGKENVQTIMLPYKYTSPQ 334 ++ Y++K F K ++G+SGG DS L +A + E+ Q I + Y Sbjct: 30 MKAYLKKYPFLKTFVLGISGGQDSTLAGRLAQLTMEEMREETKDESYQFIAVRLPYGEQA 89 Query: 335 SLEDAAAC----AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 EDA A + + ++ P D S + + G NI++R R Sbjct: 90 DEEDAKAALDFIQPDVSLRVNIKPAVDAQVQVLSEAGVEISDFNKG----NIKARQRMIT 145 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 A++ +L T + +E G+ T +GD PL L K Q QL N+ Sbjct: 146 QYAVAGERAGAVLGTDHAAENITGFFTKFGDGGADILPLFRLNKRQGKQLLQALNA---- 201 Query: 451 SGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESL 483 P + K P+A+L +P D+ +L Sbjct: 202 ----------PEKLYTKIPTADLEDGKPMIADEVAL 227 >gi|90021519|ref|YP_527346.1| heat shock protein DnaJ-like protein [Saccharophagus degradans 2-40] gi|89951119|gb|ABD81134.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Saccharophagus degradans 2-40] Length = 301 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 33/261 (12%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + A+ Q D A N+A EA G L++ EL + Y F + Sbjct: 1 MSRSFLAAVVQQAIGGNDKAENMAATAEHVREAANSGAQLVVLQELHATQY------FCQ 54 Query: 61 SFIQACSSAIDTLKSDTHDGGAG---------IVVGFPRQDQEGVLNSVVILDA--GNII 109 C + L +T++ A ++ GF + N+ ++D G + Sbjct: 55 VEDTECFDLAEDLDGETYEYFAELAAELDIVLVISGFECRAPGLYHNTAQVIDGDLGRVG 114 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSN------DPIVFRDIRLGILICEDIWKNSNICKHL 163 R K+++P+ F+EK F G ++ +P+ R +LG+++C D W + + Sbjct: 115 FFR-KMHIPDDPGFYEKFYFTPGDADAPGCGFEPVETRLGKLGVMVCWDQWYPEG-ARLM 172 Query: 164 KKQGAEFLFSLNASPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVGGQDELI 215 GA+ L A + + ++R VT Q SH LP++ N+ G + + Sbjct: 173 AMAGADVLIYPTAIGWDPDDDEDEQERQRDAWVTIQRSHAIANGLPVLVANRTGFEASPV 232 Query: 216 FDGASFCFDGQQQLAFQMKHF 236 DG F G +A F Sbjct: 233 DDGTGIEFWGTSFIAGPQGEF 253 >gi|94039502|dbj|BAE93527.1| NAD synthase [Onion yellows phytoplasma] gi|94039510|dbj|BAE93531.1| NAD synthase [Onion yellows phytoplasma] gi|94039534|dbj|BAE93543.1| NAD synthase [Phytoplasma sp. AYBG] Length = 112 Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +A VG+ N A + N+ +LF EL +S Y DL F+ +F++ Sbjct: 7 IKIELASPPLTVGNPLKN---AYSMQNVLNKSKASFVLFPELCLSSYTAGDLFFETTFLE 63 Query: 65 ACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 A+D LK+++ +G ++G P E + N VI+ I+ + K Sbjct: 64 QNFQALDWLLKNNSFEG--VYILGMPLALHEVLFNVAVIIQKDKILGITPK 112 >gi|59800588|ref|YP_207300.1| YbaX [Neisseria gonorrhoeae FA 1090] gi|75356427|sp|Q5FA99|QUEC_NEIG1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|59717483|gb|AAW88888.1| putative aluminum resistance protein [Neisseria gonorrhoeae FA 1090] Length = 224 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 12/100 (12%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLGVSQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGIVAENIQSRIRG 388 L + SLM Q L +E + I I++ G Sbjct: 64 LDL--------SLMRQITHNALMDETAAIETAAIETADNG 95 >gi|257452359|ref|ZP_05617658.1| queuosine biosynthesis protein QueC [Fusobacterium sp. 3_1_5R] gi|257465849|ref|ZP_05630160.1| queuosine biosynthesis protein QueC [Fusobacterium gonidiaformans ATCC 25563] gi|315917006|ref|ZP_07913246.1| archaeosine biosynthesis protein queC [Fusobacterium gonidiaformans ATCC 25563] gi|317058902|ref|ZP_07923387.1| archaeosine biosynthesis protein queC [Fusobacterium sp. 3_1_5R] gi|313684578|gb|EFS21413.1| archaeosine biosynthesis protein queC [Fusobacterium sp. 3_1_5R] gi|313690881|gb|EFS27716.1| archaeosine biosynthesis protein queC [Fusobacterium gonidiaformans ATCC 25563] Length = 231 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 7/141 (4%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV++ LSGG+DS C AIAVD G + V + Y + + A A AK + L Sbjct: 2 KVLVLLSGGLDSTTCLAIAVDKYGADQVVALSASYGQKHTKEILSARAIAKYYQVELLEL 61 Query: 354 PIHDLVNHF-FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + + ++ SL+S +E P AE + + IL + L+T+ +S Sbjct: 62 NLSKIFSYSNCSLLSHSTEEVPHHSYAEQLNQQ-EEEILSTYVPFRNGLFLSTAASIALS 120 Query: 413 -----VGYGTLYGDMSGGFNP 428 + YG D +G P Sbjct: 121 KECSIILYGAHSDDAAGNAYP 141 >gi|84385755|ref|ZP_00988785.1| carbon-nitrogen hydrolase [Vibrio splendidus 12B01] gi|84379071|gb|EAP95924.1| carbon-nitrogen hydrolase [Vibrio splendidus 12B01] Length = 263 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 7/155 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + + I + QL + NI E + G D+ L ELF +GY D Sbjct: 1 MNNVSITLIQLEVEYKNKQKNIESVSDLLEAESTVG-DITLLPELFTTGYIFNDAEEIHE 59 Query: 62 FIQAC--SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + S+ I +L IV G +D NSVV++D ++ K++ Sbjct: 60 LAEDFNDSTTIHSLTQMAAKHHTLIVAGIAEKDSGQYYNSVVVVDGSGLLHKYRKVSQTK 119 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW 154 + +K+ F G + ++ G+ IC DIW Sbjct: 120 F----DKQYFSRGCELLTFELKGLKFGVAICFDIW 150 >gi|186685637|ref|YP_001868833.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nostoc punctiforme PCC 73102] gi|186468089|gb|ACC83890.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nostoc punctiforme PCC 73102] Length = 270 Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 20/171 (11%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDT--- 72 V D+ N+A+A E A R+G +L+ E F Y E+ K Q + A+++ Sbjct: 14 VPDLHKNLAQAEELIELAVRRGAELVGLPENF--SYMGEE---KDKLAQGDAIALESEKF 68 Query: 73 LKSDTHDGGAGIVVG---FPRQDQEGVLNSVVILD-AGNIIAVRDKINL-----PNYSEF 123 LK I+ G P + V N+ +++D +G ++ K++L P+ + + Sbjct: 69 LKKMAQRFQITILGGSFPLPVDNTGKVYNTTLLIDPSGQELSRYYKVHLFDVDVPDGNTY 128 Query: 124 HEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFLF 172 E T ++G P+ F + LG+ IC D+ + + +HL ++GA+ +F Sbjct: 129 RESSTVVAGTQLPPVHFSEKLGNLGLSICYDV-RFPELYRHLAEKGADVIF 178 >gi|40890249|gb|AAR97469.1| nitrilase [uncultured organism] Length = 358 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 26/49 (53%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 KLK+A Q P D+ + KA R +EA G L+ F E +I GYP Sbjct: 7 KLKVAAVQAAPAFLDVDAAVDKAVRLIDEAAANGSSLVAFPETWIPGYP 55 >gi|255065046|ref|ZP_05316901.1| ExsB protein [Neisseria sicca ATCC 29256] gi|255050467|gb|EET45931.1| ExsB protein [Neisseria sicca ATCC 29256] Length = 219 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 30/63 (47%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGVKQTV 63 Query: 353 LPI 355 L + Sbjct: 64 LDL 66 >gi|223041977|ref|ZP_03612161.1| queuosine biosynthesis protein QueC [Actinobacillus minor 202] gi|223017234|gb|EEF15662.1| queuosine biosynthesis protein QueC [Actinobacillus minor 202] Length = 221 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 27/57 (47%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 K I+ SGG DS C A+ GKENV+ I Y LE A A+ LG K Sbjct: 5 QKAIVIFSGGQDSTTCLFQAIAEFGKENVEVITFQYGQRHAIELEKAQWIAQDLGVK 61 >gi|255950138|ref|XP_002565836.1| Pc22g19330 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592853|emb|CAP99221.1| Pc22g19330 [Penicillium chrysogenum Wisconsin 54-1255] Length = 328 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 15/126 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------PED 55 +++++A Q PV D+ G + K + ++G +++ F E+FI GYP P D Sbjct: 7 RRVRVAAIQAEPVWNDLQGGVNKVISLLGDVGKEGANVVGFPEVFIPGYPWSIFTATPLD 66 Query: 56 -LVFKKSFIQACSSAIDT-----LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNI 108 F + + S A+D+ +++ + G V+GF + Q + S V ++ G I Sbjct: 67 NAPFMEEYFHN-SLAVDSDEMRRIQAAVKENGTFCVLGFSERYQGSLYISQVFINTDGQI 125 Query: 109 IAVRDK 114 + R K Sbjct: 126 VHHRRK 131 >gi|161869451|ref|YP_001598618.1| aluminum resistance protein, putative [Neisseria meningitidis 053442] gi|189038928|sp|A9M1Y9|QUEC_NEIM0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|161595004|gb|ABX72664.1| aluminum resistance protein, putative [Neisseria meningitidis 053442] Length = 220 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 13/94 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGIKQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI-VAEN 381 L + SLM Q L ++ + I AEN Sbjct: 64 LDL--------SLMRQITHNALMDDTAAIETAEN 89 >gi|332292169|ref|YP_004430778.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Krokinobacter diaphorus 4H-3-7-5] gi|332170255|gb|AEE19510.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Krokinobacter diaphorus 4H-3-7-5] Length = 319 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 29/48 (60%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 LK+A+AQ+ PV G+ I K + A +EA +LI+F E + GYP Sbjct: 7 LKVALAQIAPVWGNREETIKKIKIAIQEAAENEAELIVFGEGLLPGYP 54 >gi|257064933|ref|YP_003144605.1| exsB protein [Slackia heliotrinireducens DSM 20476] gi|256792586|gb|ACV23256.1| exsB protein [Slackia heliotrinireducens DSM 20476] Length = 235 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + ++ SGG+DS C A+A + G +NV ++ + Y + L A A AK G + VL Sbjct: 9 RAMVLSSGGVDSTTCLALACEQFGADNVTSVSVFYGQRHNKELACADAVAKHYGVAHHVL 68 Query: 354 PIHD-LVNHFFSLMSQFLQE 372 + + L N +LM+ QE Sbjct: 69 DLANILANSNNALMADSTQE 88 >gi|254167002|ref|ZP_04873855.1| hydrolase, carbon-nitrogen family [Aciduliprofundum boonei T469] gi|197623858|gb|EDY36420.1| hydrolase, carbon-nitrogen family [Aciduliprofundum boonei T469] Length = 280 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 9/171 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I Q+N V D+ N KA+ +A + D ++F E+F+ G + K Sbjct: 2 VRICAVQMNVVHNDVPKNHKKAKNYVVQAGDKECDFLVFPEIFLEGVIRDINSLNKLARP 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLN-SVVILDAGNIIAVRDKINLPNYSE 122 D + G IV+G + +G N SV+I D GNII K L Sbjct: 62 IPGEYTDWFTKYAEEYGMHIVMGSIHEKTVDGFYNTSVLIDDKGNIIGKYRKNFL----- 116 Query: 123 FHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 + + F+ P+ ++GI IC D + + ++GA+ LF Sbjct: 117 WASENKFLKPSKERPVFDTKFGKVGINICWDF-AFPEVANTMARKGAKILF 166 >gi|186470950|ref|YP_001862268.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia phymatum STM815] gi|184197259|gb|ACC75222.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia phymatum STM815] Length = 328 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 28/176 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV--- 57 M K ++ A Q+ PV+ G + K R E RQG+ F E + YP + Sbjct: 1 MSKIIRAAAVQIAPVLYSREGTVDKVVRKILELGRQGVQFATFPETIVPYYPYFSFIESP 60 Query: 58 ------FKKSFIQACSSAIDTLKS---DTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 K QA + DT ++ G + +G +D + N+ ++ DA G Sbjct: 61 FAMGAEHYKLLEQAVTVPSDTTRAIGDAARQAGMVVSIGVNERDGGTIYNTQLLFDADGT 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSN 158 ++ R K++ P Y HE+ + G D R I R+G L C W++ N Sbjct: 121 LVQRRRKLS-PTY---HERMVWGMG---DGSGLRAIDTAVGRVGQLAC---WEHYN 166 >gi|11499151|ref|NP_070385.1| hypothetical protein AF1556 [Archaeoglobus fulgidus DSM 4304] gi|2649005|gb|AAB89691.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 274 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 7/83 (8%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP-QSLEDAA 340 +L ++Q+ F KV+I SGG+DS+ AA+ +A G E + +L SP + +E+A Sbjct: 18 NLNHFIQQ--FEKVLIAFSGGVDSSTLAAVCSNA-GVEVLAVTVLS--SVSPRREMEEAK 72 Query: 341 ACAKALGCKYDVLPIHDLVNHFF 363 A+ LG +++ L I DL++ F Sbjct: 73 RIAEELGVRHEFLKI-DLMDEDF 94 >gi|221214440|ref|ZP_03587411.1| hydrolase, carbon-nitrogen family [Burkholderia multivorans CGD1] gi|221165697|gb|EED98172.1| hydrolase, carbon-nitrogen family [Burkholderia multivorans CGD1] Length = 275 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 20/150 (13%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTE--LFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 D+ N+A+ARR EA +G L+L E F+ + L + + I + Sbjct: 23 DVGRNLAEARRLIAEAADEGAQLVLLPEYFCFMGQRDTDKLALAEPY---GDGPIQQFLA 79 Query: 76 DTHDGGAGIVVG--FPRQDQEG--VLNSVVILD-AGNIIAVRDKINLPNYSE----FHEK 126 D A V+G P + E VLN+ ++ D +GN A DKI+L N+ + F E Sbjct: 80 DAARRHALWVIGGTLPLKAPEPQRVLNTTLVFDPSGNEAARYDKIHLFNFEKGDESFDEA 139 Query: 127 RTFISGYSNDPIVFRDI---RLGILICEDI 153 RT G + +V D R+G+ +C D+ Sbjct: 140 RTIRPGET---VVTFDAPFGRVGLSVCYDL 166 >gi|197302191|ref|ZP_03167250.1| hypothetical protein RUMLAC_00918 [Ruminococcus lactaris ATCC 29176] gi|197302778|ref|ZP_03167831.1| hypothetical protein RUMLAC_01507 [Ruminococcus lactaris ATCC 29176] gi|197298176|gb|EDY32723.1| hypothetical protein RUMLAC_01507 [Ruminococcus lactaris ATCC 29176] gi|197298622|gb|EDY33163.1| hypothetical protein RUMLAC_00918 [Ruminococcus lactaris ATCC 29176] Length = 266 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 98/248 (39%), Gaps = 47/248 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTEL----FISGYPPEDLV---- 57 +IA+ Q N G + N+ A +EA G DLILF E+ F YP +D+ Sbjct: 3 RIALFQ-NKNKGSVNENLNAGISAIKEAAENGADLILFPEVQLTEFFPQYPGQDVSGYAC 61 Query: 58 -FKKSFIQACSSAIDT----------LKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAG 106 IQA +A L+ HD A I++G G Sbjct: 62 ELDGEIIQAFQAACRENHIMAVPNVYLREGGHDYDASILIG----------------RDG 105 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKK 165 II ++ +++ F+E+ + + DI R+GI++C D +I + Sbjct: 106 EIIGIQKMVHVAQAEHFYEQDYYTPSNDGFHVFDTDIGRIGIVVCFDRHYPESI-RTEAL 164 Query: 166 QGAEFLF--SLN--ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 GA+ + ++N A P + + R + ++ I N+VG +D++ F G S Sbjct: 165 MGADLILVPTVNEKAEPLTMFEWEIRVQAFQNSVA-----IAMCNRVGTEDDMQFAGESL 219 Query: 222 CFDGQQQL 229 D L Sbjct: 220 VTDAYGNL 227 >gi|149921795|ref|ZP_01910241.1| NAD+ synthetase [Plesiocystis pacifica SIR-1] gi|149817356|gb|EDM76830.1| NAD+ synthetase [Plesiocystis pacifica SIR-1] Length = 331 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 +P+ + +A + V ++R + + + LSGG+DSA+ + ALG EN+ T+ Sbjct: 1 MPVLDPQALIDDRVAAIRSFHDAVGTRRAELDLSGGVDSAVMLGLLSRALGPENIVTVYS 60 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 ++S S E A A A A G L I DL F L+ Sbjct: 61 SI-HSSTDSRERAQAAADAFGVP---LVIVDLTAMFDQLI 96 >gi|298491152|ref|YP_003721329.1| queuosine synthesis-like protein ['Nostoc azollae' 0708] gi|298233070|gb|ADI64206.1| Queuosine synthesis-like protein ['Nostoc azollae' 0708] Length = 273 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + +I SGG+DS L A IA D LG + + P+ L DA A A +G + ++ Sbjct: 19 QALIAYSGGVDSTLVAKIAYDLLGDRALAVTAVSPSLL-PEELADATAQAATIGIAHKIV 77 Query: 354 PIHDLVN 360 H++ N Sbjct: 78 QSHEMEN 84 >gi|183597190|ref|ZP_02958683.1| hypothetical protein PROSTU_00433 [Providencia stuartii ATCC 25827] gi|188023504|gb|EDU61544.1| hypothetical protein PROSTU_00433 [Providencia stuartii ATCC 25827] Length = 106 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 26/49 (53%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY 51 K K+A P GD+ GNI + A E+ QG+D +F E +SGY Sbjct: 8 KSSKVAAVDFVPAWGDLEGNIRRLAEAAEKVAAQGVDYAVFPETAVSGY 56 >gi|153813145|ref|ZP_01965813.1| hypothetical protein RUMOBE_03554 [Ruminococcus obeum ATCC 29174] gi|149830800|gb|EDM85890.1| hypothetical protein RUMOBE_03554 [Ruminococcus obeum ATCC 29174] Length = 375 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 16/94 (17%) Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAV----DALGK-----ENVQTIMLPYK-YTSPQS 335 Y+QK K II +SGG+DS++ A + V D G +N Q ++ +P Sbjct: 10 YMQK----KAIIAMSGGVDSSVAAYLMVKEGYDCAGATLKLYDNPQCSFPGHRACCTPSD 65 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 EDA + A LG Y V P+HD H S++ +F Sbjct: 66 TEDARSVAARLGMLYYVFPMHDEFRH--SVIDKF 97 >gi|228475103|ref|ZP_04059830.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|228270867|gb|EEK12264.1| conserved hypothetical protein [Staphylococcus hominis SK119] Length = 275 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 29/54 (53%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 V+I SGG+DS+L A++ LGKENV+ +++ + + A LG Sbjct: 21 VVIAFSGGVDSSLVLKKAINVLGKENVKPVVVKSELFRNEEFNKAIELGHELGI 74 >gi|322703489|gb|EFY95097.1| hydrolase, carbon-nitrogen family protein [Metarhizium anisopliae ARSEF 23] Length = 959 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 54/260 (20%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA Q P VGD+ N+ +A + + +DL++ EL SGY + L F++ Sbjct: 1 MRIACLQFAPQVGDVDNNLNRADAILSRVDPEALDLLVLPELAFSGYNFKSLGDISQFLE 60 Query: 65 ACSSAIDTLKSDT----HDGGAGIVVGFPRQ--------DQEGVLNSVVILDA-GNIIAV 111 S I +L + T +D ++ G+P + N+ +I++ G +A Sbjct: 61 PSVSGISSLWARTTALKYD--CTVIAGYPEKVDPTFKWPTNPEYYNAAIIVNGEGETVA- 117 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRL------GILICEDI--------WKNS 157 NY + H T + P F RL I IC D+ W Sbjct: 118 -------NYRKTHLYYTDETWALEGPAGFFGERLDGLGPTAIGICMDLNPYKFEAPWDKF 170 Query: 158 NICKHLKKQGAEFL-----FSLNASPYYHNKLKK------------RHEIVTGQISHVHL 200 +H+ GA + + N P +++ + R E + S + Sbjct: 171 EFAQHVLDCGARLVVISMAWITNDDPRQFSRMPQEPDMNTLLYWVSRLEPIIRAESTEEV 230 Query: 201 PIIYVNQVGGQDELIFDGAS 220 +++ N+ G + E+ + G S Sbjct: 231 IVVFANRTGMEGEVTYAGTS 250 >gi|256846579|ref|ZP_05552036.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2] gi|294784166|ref|ZP_06749467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium sp. 3_1_27] gi|256718348|gb|EEU31904.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2] gi|294488236|gb|EFG35581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium sp. 3_1_27] Length = 343 Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 12/131 (9%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV+IG+SGG+DS++ A + + G E + + + + + +EDA LG ++V+ Sbjct: 3 KVVIGMSGGVDSSVSAYLLKEQ-GYEVIGVTLNQHLEENSKDIEDAKKVCNKLGISHEVI 61 Query: 354 PIHD-----LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 I ++ +F S + P I + I+ + IL +++ KA + T + Sbjct: 62 NIRKDFENIVIKYFLDGYSSGITPSPCVICDDEIKFK----ILFDIADKYKAEYVATGHY 117 Query: 409 SEISVGYGTLY 419 + SV Y ++ Sbjct: 118 T--SVEYSEIF 126 >gi|298293205|ref|YP_003695144.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Starkeya novella DSM 506] gi|296929716|gb|ADH90525.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Starkeya novella DSM 506] Length = 289 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 11/155 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A Q+ P GD + N+ + +A +G LI+ EL +GY E +++F Sbjct: 7 VRVACIQMEPRFGDTSANVEHSLGLIAKAADKGATLIVLPELANTGYVFE--TREEAFAL 64 Query: 65 ACS----SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 A S + G IV G ++ + NS V++ I K++L Sbjct: 65 AESIPDGPTCRAWAGIAAERGLHIVAGITEREGASLYNSAVVIGPQGHIGTYRKMHLWG- 123 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIW 154 +E F G + P+ I R+G+ IC D W Sbjct: 124 ---NENLFFEPGNNGFPVFHTAIGRIGVAICYDGW 155 >gi|16226740|gb|AAL16248.1|AF428318_1 AT3g44310/T10D17_100 [Arabidopsis thaliana] Length = 346 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 27/48 (56%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +++ I Q + V D I KA + EA +G +L+LF E FI GYP Sbjct: 25 VRVTIVQSSTVYNDTPATIDKAEKYIVEAASKGAELVLFPEGFIGGYP 72 >gi|16400|emb|CAA45041.1| nitrilase I [Arabidopsis thaliana] Length = 346 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 27/48 (56%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +++ I Q + V D I KA + EA +G +L+LF E FI GYP Sbjct: 25 VRVTIVQSSTVYNDTPATIDKAEKYIVEAASKGAELVLFPEGFIGGYP 72 >gi|222528644|ref|YP_002572526.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Caldicellulosiruptor bescii DSM 6725] gi|222455491|gb|ACM59753.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor bescii DSM 6725] Length = 231 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 18/171 (10%) Query: 15 VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLK 74 + I N+ K E+A + +DLI F E+ ++GY E L+ + A+D + Sbjct: 3 ISNSIENNLLKIANFLEQAKVEEIDLICFPEMALTGYNIE-LLKSINLNDIILPALDKIS 61 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH----EKRTFI 130 ++G P +++ + N I+ Y + H EK+ F Sbjct: 62 QLASKYSVCCIIGHPFYERKELKNCASIIFPDG--------RCEKYYKLHPTEIEKKIFS 113 Query: 131 SGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 +G +P+VF + R GI IC D NI K K +G +F L A Y Sbjct: 114 NG--KNPLVFKYKHKRFGIAICRD-QNFYNIFKEYKDRGCVGVFILAAHYY 161 >gi|325261551|ref|ZP_08128289.1| putative hydrolase, carbon-nitrogen family [Clostridium sp. D5] gi|324033005|gb|EGB94282.1| putative hydrolase, carbon-nitrogen family [Clostridium sp. D5] Length = 261 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 18/154 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF---K 59 K LK+ I Q++ + G + N K ++A E +DL+ F EL ISGY E + Sbjct: 7 KVLKLGIVQMSVLEGKVEDNCRKIKKAVESHAADDIDLLCFPELCISGYDFESAALSDRE 66 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLP 118 +F ++ + I+ G + E ++ + D G + KI+L Sbjct: 67 AAFFSELAAEYEI----------AILAGIHIPEGEKHYDTACLWDEKGELQGEYRKIHLW 116 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 + E F G + FR +G+LIC D Sbjct: 117 D----TENDFFEKGDELVTVPFRGWNIGMLICAD 146 >gi|303235078|ref|ZP_07321701.1| hydrolase, carbon-nitrogen family [Finegoldia magna BVS033A4] gi|302493782|gb|EFL53565.1| hydrolase, carbon-nitrogen family [Finegoldia magna BVS033A4] Length = 244 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/236 (20%), Positives = 97/236 (41%), Gaps = 25/236 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARR-AREEANRQGMDLILFTELFISGYPPEDLVFKKSF- 62 +KI++ + + D N+ + + AR+EA G D+ +F E F+ G+ V+K Sbjct: 1 MKISLCAVEQRLNDKVFNMKQIEKYARQEA-ENGADMCVFGESFLQGFECLSFVYKDDVG 59 Query: 63 --IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS-VVILDAGNIIAVRDKINL-- 117 + S+ I ++ + I G+ D +S + + G II +++ Sbjct: 60 VPVTQNSNEIAEIRRIARENEVAISFGYIENDHGAFYSSQMTVTKRGEIINNYRRMSAGW 119 Query: 118 --PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 P+ + + + + Y D + F LIC D W + N+ ++ ++ L Sbjct: 120 KEPSACSDYREGSKLYLYKMDGVSF-----STLICGDFW-DENLYTYISMIDSDILLWPV 173 Query: 173 --SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + +Y N+ E Q V +P+++VN +D+ GA + G+ Sbjct: 174 FVDFSVIDWYKNEF----EDYKKQSQLVPMPVLFVNSFVDEDDRAKGGAYVFYQGK 225 >gi|298370142|ref|ZP_06981458.1| ExsB protein [Neisseria sp. oral taxon 014 str. F0314] gi|298281602|gb|EFI23091.1| ExsB protein [Neisseria sp. oral taxon 014 str. F0314] Length = 219 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K VL Sbjct: 5 QALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGVKQTVL 64 Query: 354 PI 355 + Sbjct: 65 DL 66 >gi|197286934|ref|YP_002152806.1| carbon-nitrogen hydrolase [Proteus mirabilis HI4320] gi|227354826|ref|ZP_03839243.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Proteus mirabilis ATCC 29906] gi|194684421|emb|CAR46123.1| putative carbon-nitrogen hydrolase [Proteus mirabilis HI4320] gi|227165144|gb|EEI49975.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Proteus mirabilis ATCC 29906] Length = 323 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 26/195 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-----PEDL 56 L L++A QL D N+AK + E A + ++L++F E+ I+GY P Sbjct: 4 LTTLRVASVQLQHKANDKDYNLAKIHQFIEMAASEKVNLLVFPEMCITGYWHVPKLPAQQ 63 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDK 114 V+ S A S+++ ++K I VG +D L VV + G Sbjct: 64 VYALSEKLADSASLKSIKQKAQQYAMAIGVGLIERDNNNNLYNTWVVCMPDG-------- 115 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRD---IRLGILICEDIWKNSNICKHLKKQ---GA 168 +L + + H + + VF I++GILIC D +N+ ++ + GA Sbjct: 116 -SLQKHRKLHAFEHPVICSGDQYTVFDTPWGIKMGILICWD----NNLVENARATALLGA 170 Query: 169 EFLFSLNASPYYHNK 183 + L + + + H++ Sbjct: 171 DILLAPHQTGGTHSR 185 >gi|172035083|ref|YP_001801584.1| CHP268-containing protein [Cyanothece sp. ATCC 51142] gi|171696537|gb|ACB49518.1| CHP268-containing protein [Cyanothece sp. ATCC 51142] Length = 276 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 + +I SGGIDS L A +A D LG ++ + P+ LEDA A +G ++ Sbjct: 16 MERALIAYSGGIDSTLVAKVAYDVLGDRSLAVTAVSPSLL-PEELEDAKIQAATIGIPHE 74 Query: 352 VLPIHDLVNHFFS 364 ++ ++ N ++ Sbjct: 75 LVNTQEMNNPNYT 87 >gi|30692067|ref|NP_851011.1| NIT1; indole-3-acetonitrile nitrilase/ indole-3-acetonitrile nitrile hydratase/ nitrilase [Arabidopsis thaliana] gi|145332737|ref|NP_001078234.1| NIT1; indole-3-acetonitrile nitrilase/ indole-3-acetonitrile nitrile hydratase/ nitrilase [Arabidopsis thaliana] gi|166898033|sp|P32961|NRL1_ARATH RecName: Full=Nitrilase 1 gi|1389699|gb|AAB05221.1| nitrilase 1 [Arabidopsis thaliana] gi|6580143|emb|CAA68935.2| nitrilase 1 [Arabidopsis thaliana] gi|7649382|emb|CAB88999.1| nitrilase 1 [Arabidopsis thaliana] gi|14596119|gb|AAK68787.1| nitrilase 1 [Arabidopsis thaliana] gi|23197664|gb|AAN15359.1| nitrilase 1 [Arabidopsis thaliana] gi|91806524|gb|ABE65989.1| nitrilase 1 [Arabidopsis thaliana] gi|225898691|dbj|BAH30476.1| hypothetical protein [Arabidopsis thaliana] gi|332644366|gb|AEE77887.1| nitrilase 1 [Arabidopsis thaliana] gi|332644368|gb|AEE77889.1| nitrilase 1 [Arabidopsis thaliana] Length = 346 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 27/48 (56%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +++ I Q + V D I KA + EA +G +L+LF E FI GYP Sbjct: 25 VRVTIVQSSTVYNDTPATIDKAEKYIVEAASKGAELVLFPEGFIGGYP 72 >gi|282859363|ref|ZP_06268471.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein [Prevotella bivia JCVIHMP010] gi|282587848|gb|EFB93045.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein [Prevotella bivia JCVIHMP010] Length = 514 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +VI+GLSGG+DS++CA + A+GK N+ I + + E K LG Sbjct: 215 RVILGLSGGVDSSVCATLLNKAIGK-NLTCIFVDHGMLRKNEFEKVMEAYKGLG 267 >gi|161525813|ref|YP_001580825.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans ATCC 17616] gi|189349466|ref|YP_001945094.1| nitrilase [Burkholderia multivorans ATCC 17616] gi|160343242|gb|ABX16328.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia multivorans ATCC 17616] gi|189333488|dbj|BAG42558.1| nitrilase [Burkholderia multivorans ATCC 17616] Length = 275 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 20/150 (13%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTE--LFISGYPPEDLVFKKSFIQACSSAIDTLKS 75 D+ N+A+ARR EA +G L+L E F+ + L + + I + Sbjct: 23 DVGRNLAEARRLIAEAADEGAQLVLLPEYFCFMGQRDTDKLALAEPY---GDGPIQQFLA 79 Query: 76 DTHDGGAGIVVG--FPRQDQEG--VLNSVVILD-AGNIIAVRDKINLPNYSE----FHEK 126 D A V+G P + E VLN+ ++ D +GN A DKI+L N+ + F E Sbjct: 80 DAARRHALWVIGGTLPLKAPEPQRVLNTTLVFDPSGNEAARYDKIHLFNFEKGDESFDEA 139 Query: 127 RTFISGYSNDPIVFRDI---RLGILICEDI 153 RT G + +V D R+G+ +C D+ Sbjct: 140 RTIRPG---ETVVTFDAPFGRVGLSVCYDL 166 >gi|40890143|gb|AAR97416.1| nitrilase [uncultured organism] Length = 312 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 24/171 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------PEDLVF 58 KIA+ Q PV +++ ++ +A A +G +LI+F E +++GYP P + Sbjct: 3 KIAVIQEPPVYLNLSKSMDRAVDLIANAASKGCELIVFPEAWLAGYPTFVWRLAPGSGMG 62 Query: 59 KKS--FIQACSSAID-------TLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDA 105 K + + ++++D L+ + G IV+G+ D G + NS I+DA Sbjct: 63 KTDELYARLLANSVDRSKEGLRPLQEAAKEHGVVIVLGYQEVDGAGSSSTIFNSCAIIDA 122 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN 156 +A + +P E F G + + R+G LIC W+N Sbjct: 123 DGRLANNHRKLMPTNPE-RMVWGFGDGSGLNVVDTAVGRIGTLIC---WEN 169 >gi|166362943|ref|YP_001655216.1| hypothetical protein MAE_02020 [Microcystis aeruginosa NIES-843] gi|166085316|dbj|BAG00024.1| hypothetical protein MAE_02020 [Microcystis aeruginosa NIES-843] Length = 269 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K +I SGG+DS L A +A D LG + + I P+ LE+A A A +G ++++ Sbjct: 20 EKALIAYSGGVDSTLVAKVAYDLLGSQAL-AITAVSPSLLPEELEEAIAQADYIGIRHEL 78 Query: 353 LPIHDLVNHFFS 364 + ++ N ++ Sbjct: 79 VETEEMNNPNYT 90 >gi|309798565|ref|ZP_07692840.1| NAD+ synthetase [Streptococcus infantis SK1302] gi|308117801|gb|EFO55202.1| NAD+ synthetase [Streptococcus infantis SK1302] Length = 230 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 33/242 (13%) Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE-DAAACAKALG-CKYD 351 +G+SGG DS L +A A+ + +T YK+ + P ++ D A KAL + D Sbjct: 1 MGISGGQDSTLAGRLAQLAMEEMRAETGDNSYKFIAVRLPYGVQADEADAQKALAFIRPD 60 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIV---AENIQSRIRGNILMALSNHSKAMLLTTSNK 408 V + + + M+ ++ S + NI++R R AL+ ++ T + Sbjct: 61 VSLVVN-IKESADAMTTAVEATGSPVSDFNKGNIKARSRMIAQYALAGAHSGAVIGTDHA 119 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEK 467 +E G+ T +GD PL L K Q QL L E+ P++ EK Sbjct: 120 AENITGFFTKFGDGGADILPLYRLNKRQGKQL---------------LKELGADPALYEK 164 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEY 527 P+A+L +E P I D++ + NE ++ + E +E Y ++ Sbjct: 165 IPTADL------EEEKP--GIADEVALGVTYNEIDDYLEGKQVSPEAQATIEKWWYKGQH 216 Query: 528 KR 529 KR Sbjct: 217 KR 218 >gi|323694789|ref|ZP_08108944.1| hypothetical protein HMPREF9475_03808 [Clostridium symbiosum WAL-14673] gi|323501105|gb|EGB17012.1| hypothetical protein HMPREF9475_03808 [Clostridium symbiosum WAL-14673] Length = 271 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 22/162 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-PPEDLVFK- 59 ++ ++IA+ Q+ V GD N+ K A G D+I F EL +GY +D++ + Sbjct: 1 MRNVRIALGQMRAVQGDTRANMKKMEAMAAGAAAGGADIICFPELSYTGYFVKKDMLLEI 60 Query: 60 -----KSFIQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILD-AGNIIAVR 112 F++ A G IV GF R D + N+ V D G I Sbjct: 61 AEREDGEFVRGICEA-------AKKNGICIVAGFAERGDSNDIYNTAVFADRQGKIAGKA 113 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDI 153 K+ L EK+ F G P+ + R ILIC D+ Sbjct: 114 RKVYLWK----SEKKRFKQG-EEFPVFETEFGRAAILICYDL 150 >gi|299783662|gb|ADJ41660.1| Putative uncharacterized protein [Lactobacillus fermentum CECT 5716] Length = 275 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 7/76 (9%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM------LPYKYTSPQSLEDAAACAKA 345 ++KV++ SGGIDS + A+ LGKENV ++ +YT +L A Sbjct: 16 YNKVLVAFSGGIDSTVVLDAALKTLGKENVLAVVANSDLFTDEEYTKAMNLAQEMG-ATV 74 Query: 346 LGCKYDVLPIHDLVNH 361 LG D L D+ N+ Sbjct: 75 LGTTLDYLSNDDIKNN 90 >gi|261380021|ref|ZP_05984594.1| ExsB protein [Neisseria subflava NJ9703] gi|284797228|gb|EFC52575.1| ExsB protein [Neisseria subflava NJ9703] Length = 219 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 30/63 (47%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAIELERARWIAQDLGVKQTV 63 Query: 353 LPI 355 L + Sbjct: 64 LDL 66 >gi|297617826|ref|YP_003702985.1| NAD synthase [Syntrophothermus lipocalidus DSM 12680] gi|297145663|gb|ADI02420.1| NAD synthase [Syntrophothermus lipocalidus DSM 12680] Length = 273 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 37/73 (50%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 + V++G SGG DS L +++D LG+ V + + S L A A+++ ++ Sbjct: 17 SLESVVLGFSGGADSTLLLKVSLDVLGRTKVLAVTFHSEIQSENELTHALQLAQSMDAQH 76 Query: 351 DVLPIHDLVNHFF 363 V+ ++L N F Sbjct: 77 LVIEGNELQNDLF 89 >gi|320007568|gb|ADW02418.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces flavogriseus ATCC 33331] Length = 280 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 12/185 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD IAK EA RQG +I F E+F + Y PE Sbjct: 1 MSHVVRAALVQAT-WTGDTESMIAKHEEHAREAARQGARIIGFQEVFNAPYFCQVQEPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRD 113 + + + + ++ + G +VV +Q G N+ ++DA G+ + Sbjct: 60 YRWAEPVPDGPT--VRRMRDLARETGMVVVVPVFEVEQSGFYYNTAAVIDADGSYLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G + P+ + ++G+ IC D + L GA+ ++ Sbjct: 118 KHHIPQVKGFWEKYYFKPGNAGWPVFDTAVGKVGVYICYDR-HFPEGWRQLGLNGAQLVY 176 Query: 173 SLNAS 177 + +A+ Sbjct: 177 NPSAT 181 >gi|302534261|ref|ZP_07286603.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces sp. C] gi|302443156|gb|EFL14972.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces sp. C] Length = 238 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 22/157 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS--F 62 +KIA AQL V D+A N A A A QG +L++F E ++GY E L Sbjct: 1 MKIAAAQLTCVPADVAANSANAEALAARAREQGAELVVFPEFTLTGYELEALAADPGLWL 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFP---RQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 A +D L+S AG+ V R D + ++ DA D ++ Sbjct: 61 ADAEDPRLDGLRS------AGLAVAVNVALRTDGPLPAIATLVYDA-------DGAHVTT 107 Query: 120 YSE----FHEKRTFISGYSNDPIVFRDIRLGILICED 152 Y++ HE+ F +G ++ +R + +C D Sbjct: 108 YAKQHLYQHEQGAFAAGTADGRFELGGVRFSLGVCFD 144 >gi|301607403|ref|XP_002933290.1| PREDICTED: LOW QUALITY PROTEIN: GMP synthase [glutamine-hydrolyzing]-like [Xenopus (Silurana) tropicalis] Length = 702 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/177 (20%), Positives = 74/177 (41%), Gaps = 17/177 (9%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + +R+ +K KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGTFTVQNREVE------CIREIKEKVGSSKVLVLLSGGVDSTVCTALLNK 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL-PIHDLVNHFFSLMSQFLQEE 373 AL ++ V + + + + + K LG + V+ H N +L Sbjct: 259 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVVNAAHSFYNGTTTLPISDEDRT 318 Query: 374 PSGIVAENI--------QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 P +++ + + +I G+ + ++N + N E+ + GTL D+ Sbjct: 319 PRKRISKTLNMTTNPEEKRKIIGDTFVKIANEVIGEM--NLNPEEVFLAQGTLRPDL 373 >gi|255523564|ref|ZP_05390532.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium carboxidivorans P7] gi|296186475|ref|ZP_06854878.1| hydrolase, carbon-nitrogen family [Clostridium carboxidivorans P7] gi|255512821|gb|EET89093.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium carboxidivorans P7] gi|296048922|gb|EFG88353.1| hydrolase, carbon-nitrogen family [Clostridium carboxidivorans P7] Length = 307 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K K+A+ Q +PV+ + I K + EA +QG +LI+F E FI YP Sbjct: 6 KNCKVALVQASPVMFNKDATIDKVVQEILEAGKQGANLIVFPESFIPCYP 55 >gi|157375461|ref|YP_001474061.1| NAD+ synthetase [Shewanella sediminis HAW-EB3] gi|157317835|gb|ABV36933.1| NAD+ synthetase [Shewanella sediminis HAW-EB3] Length = 326 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 69/190 (36%), Gaps = 48/190 (25%) Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV-------- 352 GGIDS++ IAV A+GKENV L + + S A A+ L + D+ Sbjct: 38 GGIDSSVLLTIAVRAVGKENVHASFLYDRDSEKGSEAKARIMAQWLDIRLDIADISPAMK 97 Query: 353 ------------LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI-------------- 386 +P L N +F+ E + I SR+ Sbjct: 98 SKNIYSPLIMKLVPYSALFNRMIQHSYRFINGEVPFKTSLKIGSRVGEGSWIKCLMYKFI 157 Query: 387 --------------RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDL 432 R +L + L+ +N+SE +G+ G P+ L Sbjct: 158 ICHIDRGFSERHIHRRELLNKKAIEENLSLIGAANRSEFEIGWFVKDGVDDLPVQPMTGL 217 Query: 433 YKTQVFQLAS 442 YKTQV+QLAS Sbjct: 218 YKTQVWQLAS 227 >gi|330507643|ref|YP_004384071.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanosaeta concilii GP-6] gi|328928451|gb|AEB68253.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanosaeta concilii GP-6] Length = 244 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 14/159 (8%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISG--YPPEDLVFKKSFIQACSSAIDTLKSDTHD 79 N+++A A G +++++ ELF+SG Y P D +++ +D ++ D Sbjct: 18 NLSQALYLASSALEMGAEILVYPELFLSGFCYEPIDRFWERG--TRAFEELDPFRALAKD 75 Query: 80 GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV 139 +++G R G N LD + +R KI+ + E EK+ F G S PI Sbjct: 76 SDC-LIIGSVRG---GRSNLGFCLDRTG-LKLRPKIH--PFGE--EKKHFDGGDSISPIA 126 Query: 140 FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 R R+G+ IC D+ + + + L Q A+FL ++ P Sbjct: 127 TRWGRVGLEICYDL-RFPEVARSLALQDADFLVTVAQFP 164 >gi|260778184|ref|ZP_05887077.1| predicted amidohydrolase [Vibrio coralliilyticus ATCC BAA-450] gi|260606197|gb|EEX32482.1| predicted amidohydrolase [Vibrio coralliilyticus ATCC BAA-450] Length = 254 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 24/238 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP---PEDLV 57 M + L I +AQ GDI N+ E++++ G +L++F EL ++GY ++L Sbjct: 1 MEQTLIIGLAQAPAKRGDIEANLHTHLMYVEQSSQLGANLVVFPELSLTGYELDLADELA 60 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNIIAVRDKI 115 F S + AI+TL S ++ G P D + + +V+ G I + Sbjct: 61 FDLS-----TPAINTLSSAATAHNITVIAGCPLAVPDSKPYIAAVICFPNGEI-----EF 110 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 Y E +G +N + + + + +C D + + + +L S Sbjct: 111 YSKQYLHDGEGAYCAAGKNNYVLNINNKCIALAVCADFTEPEHAQGAADNKADLYLVSAL 170 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQV---GGQDELIFDGASFCFDGQQQLA 230 SP I++G + P++ N + GG D G + ++ Q +LA Sbjct: 171 ISP---TGFTPDANILSGIARNHAFPVLLCNHISKTGGWDTC---GKNSVWNAQGELA 222 >gi|260581108|ref|ZP_05848929.1| queuosine biosynthesis protein queC [Haemophilus influenzae RdAW] gi|5853051|gb|AAD54291.1| HI1191 [Haemophilus influenzae] gi|260092237|gb|EEW76179.1| queuosine biosynthesis protein queC [Haemophilus influenzae RdAW] Length = 227 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKEN++ I Y LE A A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQDLGIK 66 >gi|40890179|gb|AAR97434.1| nitrilase [uncultured organism] Length = 328 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 19/161 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 +K A Q++PV+ AG + K + +E ++G++ +F E + YP Sbjct: 4 VKAAAVQISPVLYSRAGTVEKVVKKIDELGQKGVEFAVFPETVVPYYPYFSFVQPPYKLA 63 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 E L + + S+ D + + +G +D + N+ ++ DA G +I Sbjct: 64 TEHLRLLEESVTVPSAETDAIGDAARKANMVVSIGVNERDGGTIYNTQLLFDADGTLIQR 123 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILIC 150 R KI P Y HE+ + G + + R+G L C Sbjct: 124 RRKIT-PTY---HERMIWGQGDGSGLRAVDSVVGRIGQLAC 160 >gi|225848629|ref|YP_002728792.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643720|gb|ACN98770.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfurihydrogenibium azorense Az-Fu1] Length = 250 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 16/168 (9%) Query: 11 QLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAI 70 QLN +G++ N+ K + L+L E+F G+ ++L+ + Sbjct: 7 QLNLELGNVDSNMKKIYDILNSRKIKSDSLVLLPEMFSCGFDNDNLI---EHSKKTPKIY 63 Query: 71 DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFI 130 L+ + + I P + + V N ++D G I A R K+ L ++ +E + F Sbjct: 64 RELQEISKEKKLVIAGTLPERKKNEVYNMGFVIDNGEITAKRPKVKL--FTPTNEHKYFK 121 Query: 131 SGYSNDPIVFRDI------RLGILICEDIWKNSNICKHLKKQGAEFLF 172 +G + + DI LG +IC ++ + NI HL+K+ E + Sbjct: 122 AGKN----IHIDITESSAGNLGFMICFEL-RFPNISYHLRKKDVEIIL 164 >gi|325129660|gb|EGC52475.1| exsB protein [Neisseria meningitidis OX99.30304] gi|325135885|gb|EGC58497.1| exsB protein [Neisseria meningitidis M0579] gi|325202686|gb|ADY98140.1| exsB protein [Neisseria meningitidis M01-240149] gi|325207568|gb|ADZ03020.1| exsB protein [Neisseria meningitidis NZ-05/33] Length = 219 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 30/63 (47%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGIKQTV 63 Query: 353 LPI 355 L + Sbjct: 64 LDL 66 >gi|323484676|ref|ZP_08090038.1| hypothetical protein HMPREF9474_01789 [Clostridium symbiosum WAL-14163] gi|323402059|gb|EGA94395.1| hypothetical protein HMPREF9474_01789 [Clostridium symbiosum WAL-14163] Length = 271 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 16/159 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ ++IA+ Q+ V GD N+ K A G D+I F EL +GY V K Sbjct: 1 MRNVRIALGQMRAVQGDTRANMKKMEAMAAGAAAGGADIICFPELSYTGY----FVKKDR 56 Query: 62 FIQACSSA----IDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILD-AGNIIAVRDKI 115 ++ + + G IV GF R D + N+ V D G I K+ Sbjct: 57 LLEIAEREDGEFVRGICEAAKKNGICIVAGFAERGDSNDIYNTAVFADRQGKIAGKARKV 116 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDI 153 L EK+ F G P+ + R ILIC D+ Sbjct: 117 YLWK----SEKKRFKQG-EEFPVFETEFGRAAILICYDL 150 >gi|328782156|ref|XP_624150.2| PREDICTED: nitrilase homolog 1-like [Apis mellifera] Length = 577 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 13/193 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ QL V + NI KA A +Q D++ E F S Y + I Sbjct: 304 FRLSLVQLE-VHEEKTKNIEKAVSYISSAKKQNADIVALPECFNSPYGLQYFPKYAEHIP 362 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINL-----P 118 +++ K+ + + P +D + + N+ I G +IA KI+L P Sbjct: 363 DGETSVALSKAAKENNVYVVGGTIPERDGDKLFNTCTIWGPDGTLIAKHRKIHLFDIDIP 422 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FS 173 + F E + SG S ++ ++GI IC DI + + + + +G + L F+ Sbjct: 423 DKITFRESDSLSSGNSLTMFEVKNCKIGIGICYDI-RFEEMARIYRNKGCQMLIYPAAFN 481 Query: 174 LNASPYYHNKLKK 186 L P + + L++ Sbjct: 482 LTTGPLHWSLLQR 494 >gi|320529671|ref|ZP_08030750.1| hydrolase, carbon-nitrogen family [Selenomonas artemidis F0399] gi|320138032|gb|EFW29935.1| hydrolase, carbon-nitrogen family [Selenomonas artemidis F0399] Length = 308 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 30/50 (60%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 + ++ + Q PV+ D A ++ KA E+A Q +LI+F ELF+ GYP Sbjct: 6 QTCRLGLIQAAPVMFDKAASLEKALAWIEKAAAQDAELIVFPELFLPGYP 55 >gi|90819624|gb|ABD98457.1| nitrilase [Acidovorax facilis] Length = 369 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 18/166 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP----PEDLVFK 59 K A Q PV D I K+ EEA ++G LI F E+FI GYP D+ + Sbjct: 7 KFLAATVQAEPVWLDADATIDKSIGIIEEAAQKGASLIAFPEVFIPGYPYWAWLGDVKYS 66 Query: 60 KSF--------IQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIA 110 SF ++ + L+ +V+G+ R+ L+ V I + G I+A Sbjct: 67 LSFTSRYHENSLELGDDRMRRLQLAARRNKIALVMGYSEREAGSRYLSQVFIDERGEIVA 126 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN 156 R K+ P H +RT + + D G + + W++ Sbjct: 127 NRRKLK-PT----HVERTIYGEGNGTDFLTHDFAFGRVGGLNCWEH 167 >gi|240949104|ref|ZP_04753452.1| queuosine biosynthesis protein QueC [Actinobacillus minor NM305] gi|240296499|gb|EER47131.1| queuosine biosynthesis protein QueC [Actinobacillus minor NM305] Length = 221 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 27/57 (47%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 K I+ SGG DS C A+ GKENV+ I Y LE A A+ LG K Sbjct: 5 QKAIVIFSGGQDSTTCLFQAIAEFGKENVEVITFQYGQRHAIELEKAQWIAQDLGIK 61 >gi|51981298|emb|CAF60516.1| putative NAD synthase [Streptomyces kanamyceticus] gi|85813948|emb|CAF31571.1| putative NH3-dependent NAD(+) synthase [Streptomyces kanamyceticus] gi|108743496|dbj|BAE95599.1| NH(3)-dependent NAD(+)synthetase [Streptomyces kanamyceticus] Length = 278 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 60/270 (22%), Positives = 102/270 (37%), Gaps = 42/270 (15%) Query: 253 QWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 Q D S + P +E E V L + + +++G+SGG+DS + Sbjct: 10 QQEIARDLQVSASFDPAREIERR----VAFLTERLTSTGLRSLVLGISGGVDSTTAGRLC 65 Query: 313 VDALGKENVQT---------IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH------D 357 L E +T + LPY Q+ E A A VL + Sbjct: 66 --QLAVERARTAGHEATFYAMRLPYGV---QADEKDAQLALGFIAADQVLTVDVKAASDA 120 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + F E V NI++R R A++ +++ T + +E G+ T Sbjct: 121 ALEAALTGGVVFRDERHQDFVQGNIKARQRMIAQYAVAGARDGLVVGTDHAAEAVSGFFT 180 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR--- 474 +GD + PL L K R + LG P ++ K P+A+L Sbjct: 181 KFGDGAADVVPLTGLTK---------RRVRAVADALGA-----PAELVWKVPTADLETLD 226 Query: 475 PHQTDQESLP-PYPILDDIIKRIVENEESF 503 P + D+++L Y +DD ++ ++ SF Sbjct: 227 PGKPDEDALGVTYDEIDDFLEGKPVSDASF 256 >gi|257467821|ref|ZP_05631917.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase [Fusobacterium ulcerans ATCC 49185] gi|317062110|ref|ZP_07926595.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium ulcerans ATCC 49185] gi|313687786|gb|EFS24621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium ulcerans ATCC 49185] Length = 346 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 22/198 (11%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA----L 346 N K +IG+SGG+DS++ A + L ++ + I + + +SL + A+ L Sbjct: 2 NRKKAVIGMSGGVDSSVGAYL----LKEQGYEVIGVTLNHKKEKSLNEEIKAAQRICDFL 57 Query: 347 GCKYDVLPIHDL-----VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 G ++ ++ I +L ++ F SQ + P I E ++ R +L ++ A Sbjct: 58 GIEHKIIDIEELFQKEVIDDFLEGYSQGITPSPCVICDERVKMR----VLFETADKEGAY 113 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 + T + S + + ++P KD Q + L N I+ L PL Sbjct: 114 FVATGHYSSVEYSEEFKRDLLKVSYDPRKD----QSYMLYRLDNDK-ISRLLFPLHSYEK 168 Query: 462 PSILEKSPSAELRPHQTD 479 I E + + L H + Sbjct: 169 KQIREIAKNIGLEVHDKE 186 >gi|288575467|ref|ZP_05977006.2| ExsB protein [Neisseria mucosa ATCC 25996] gi|288567702|gb|EFC89262.1| ExsB protein [Neisseria mucosa ATCC 25996] Length = 255 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K VL Sbjct: 41 QALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLGVKQTVL 100 Query: 354 PI 355 + Sbjct: 101 DL 102 >gi|11499237|ref|NP_070475.1| hypothetical protein AF1647 [Archaeoglobus fulgidus DSM 4304] gi|2648903|gb|AAB89595.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 258 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 18/155 (11%) Query: 21 GNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSDTHD 79 G+ A R A G +L+LF E F S PE L SF++ SS H Sbjct: 12 GDFGSAERLAMAAVEGGAELLLFPEYFSYSRLAPEVLDETLSFLKRISS--------EH- 62 Query: 80 GGAGIVV-GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPI 138 G+VV G D+ G N + D+G +I V+DKI+ P E + G Sbjct: 63 ---GVVVSGNAVVDENGYRNRSFLFDSGELIGVQDKIH-PTRVE--RELGIQCGTKLQVF 116 Query: 139 VFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 R + L+C DI IC+ +GAE + + Sbjct: 117 EVRGAMISTLVCADILY-PEICRVAALKGAEIVLN 150 >gi|299066835|emb|CBJ38030.1| putative aliphatic nitrilase (nitA) [Ralstonia solanacearum CMR15] Length = 343 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 20/147 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 L + K A Q PV D + K R +EA G L+ F E+F++GYP Sbjct: 4 LPQFKAAAVQAAPVFLDTDATVDKVCRLIQEAAENGARLVAFPEVFVAGYPYWSWIMNPI 63 Query: 53 ---PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV---LNSVV-ILDA 105 P +S I+ I + +V+G + + G+ N++V I D Sbjct: 64 EGSPWFEKLARSAIELPGPEIAKIAQAAARHRINVVIGVNERSRYGIGTLYNTIVTIADD 123 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISG 132 G I+ K+ +P ++ EK T+ G Sbjct: 124 GRILGRHRKL-VPTWA---EKLTWAPG 146 >gi|259048110|ref|ZP_05738511.1| PP-loop family protein [Granulicatella adiacens ATCC 49175] gi|259035171|gb|EEW36426.1| PP-loop family protein [Granulicatella adiacens ATCC 49175] Length = 274 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K+++ SGGIDS+ IAVD LG++NV ++ + S + +A +G + L Sbjct: 17 KIVVPYSGGIDSSYLLKIAVDTLGRDNVIAAVVNSELFSDREFSEAIDLGTEMGARVLGL 76 Query: 354 PIHDL 358 + +L Sbjct: 77 EMEEL 81 >gi|55820325|ref|YP_138767.1| NAD synthetase [Streptococcus thermophilus LMG 18311] gi|55822215|ref|YP_140656.1| NAD synthetase [Streptococcus thermophilus CNRZ1066] gi|116627162|ref|YP_819781.1| NAD synthetase [Streptococcus thermophilus LMD-9] gi|81676617|sp|Q5M1L1|NADE_STRT1 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|81676766|sp|Q5M652|NADE_STRT2 RecName: Full=NH(3)-dependent NAD(+) synthetase gi|122268235|sp|Q03MI7|NADE_STRTD RecName: Full=NH(3)-dependent NAD(+) synthetase gi|55736310|gb|AAV59952.1| NH(3)-dependent NAD(+) synthetase [Streptococcus thermophilus LMG 18311] gi|55738200|gb|AAV61841.1| NH(3)-dependent NAD(+) synthetase [Streptococcus thermophilus CNRZ1066] gi|116100439|gb|ABJ65585.1| NH(3)-dependent NAD(+) synthetase [Streptococcus thermophilus LMD-9] gi|312277639|gb|ADQ62296.1| NH(3)-dependent NAD(+) synthetase [Streptococcus thermophilus ND03] Length = 273 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 39/230 (16%) Query: 283 LRDYVQKNNFHKV-IIGLSGGIDSALC---AAIAVDALGKENVQ-----TIMLPYKYTSP 333 L+ Y+ K+ F K ++G+SGG DS L A +AV+ L E + I LPY Sbjct: 30 LKAYMIKHPFLKTYVLGISGGQDSTLAGRLAQLAVEELRAETEKDYQFIAIRLPY---GV 86 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 Q+ ED A A A K DV +N ++ Q + +G+ NI++R R Sbjct: 87 QADEDDAQRALAF-IKPDVSLT---INIKEAVDGQVAELAKAGVNVSDFNKGNIKARQRM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ + ++ T + +E G+ T +GD PL L K R Sbjct: 143 ITQYAVAGENSGAVIGTDHAAENLTGFFTKFGDGGADILPLFRLNK---------RQGAA 193 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + + LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 194 LLAELGA-----DKALYEKVPTADLEEDKPGIADEVALGVTYHEIDDYLE 238 >gi|311105883|ref|YP_003978736.1| carbon-nitrogen hydrolase family protein 2 [Achromobacter xylosoxidans A8] gi|310760572|gb|ADP16021.1| carbon-nitrogen hydrolase family protein 2 [Achromobacter xylosoxidans A8] Length = 296 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 12/231 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A Q+ P +G++A NIA++ E A QG L++ EL +GY E + +A Sbjct: 16 VASVQMEPAIGEVAANIARSVELVELAVAQGARLVVLPELANTGYMFESREEAHALAEAV 75 Query: 67 SSAIDTLK--SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + G +V G + + NS +I + K++L Sbjct: 76 PEGPSSQAWIALAQRLGIYLVAGIAERAGGRLYNSALIAGPEGYLGTYRKLHLWG----D 131 Query: 125 EKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL-FSLNASPY--- 179 E F +G P+ ++ R+G+ IC D W + + L +GA+ + N P Sbjct: 132 ENLYFEAGDLGLPLFDTELGRIGVAICYDGW-FPEVYRLLAVRGADIVAVPTNWVPMPGQ 190 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + H + L ++ ++VG + F G S Q +A Sbjct: 191 TRDGPVMAHALTMSGAHSNGLTVVCADRVGTERGQPFVGRSLIVGSQGWMA 241 >gi|262306045|gb|ACY45615.1| gln amidotransferase [Euperipatoides rowelli] Length = 197 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 21/184 (11%) Query: 250 QLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 +L N++ D + +Q E C+ +R+ V+ N KV++ +SGG+DS +CA Sbjct: 7 KLMLKNFLYDIAGCKGNFTMQNREL---GCIEYIRNTVKDN---KVLMLVSGGVDSTVCA 60 Query: 310 AIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL-PIHDLVNHFFSLMSQ 368 A+ AL ++ V + + + + E +G K V+ H N S++ Sbjct: 61 ALLHKALKEDQVIAVHIDNGFMRKKESEQVEKSLNKIGLKLKVVNGAHSFYNATTSILVD 120 Query: 369 FLQEEPSG----------IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 +++P+ + + I G+ M ++N + L SE+ +G GTL Sbjct: 121 --KKDPNSRKRMTTLLCNTICPEDKRNIIGDTFMRVANEVVSEL--NLKPSEVYLGQGTL 176 Query: 419 YGDM 422 D+ Sbjct: 177 RPDL 180 >gi|255712117|ref|XP_002552341.1| KLTH0C02596p [Lachancea thermotolerans] gi|238933720|emb|CAR21903.1| KLTH0C02596p [Lachancea thermotolerans] Length = 415 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 27/121 (22%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY------------- 51 L+IA+ QLNP +G + + +A R D+++F E +SGY Sbjct: 10 LRIAVVQLNPQIGHLEETVVRAHSLVRRVERYQPDIVVFPEFALSGYSFHSRAEISAHLC 69 Query: 52 -PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNII 109 P E ++ F Q S + + V+G+P R D + NS +++D + Sbjct: 70 RPQEGPAWE--FCQQISRKLSCV----------TVMGYPERGDNQQAYNSALVVDEEGKL 117 Query: 110 A 110 A Sbjct: 118 A 118 >gi|254473684|ref|ZP_05087079.1| nitrilase, putative [Pseudovibrio sp. JE062] gi|211957070|gb|EEA92275.1| nitrilase, putative [Pseudovibrio sp. JE062] Length = 331 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 27/49 (55%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K+K+A+AQ+ PV + K A E A +QG L+ F E + GYP Sbjct: 18 KIKVALAQIAPVWLKREATLQKVLDAVELAGKQGCQLVAFGETLVPGYP 66 >gi|40890227|gb|AAR97458.1| nitrilase [uncultured organism] Length = 336 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 22/169 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 +K A Q+ P G + K + +EA +G+ +I+F E FI YP Sbjct: 7 IKAAAVQITPDFDSADGTVKKVCKVIDEAGAKGVQIIVFPETFIPYYPYFSFITPPVTAG 66 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 E L + + + +V+G +D + N+ +I D G ++ Sbjct: 67 AEHLKLYEKSVVIPGPVTQAIAERARVNQMVVVLGVNERDNGSLYNTQLIFDTNGELLLK 126 Query: 112 RDKINLPNYSEFHEKRTFISG-YSNDPIVFRDI-RLGILICEDIWKNSN 158 R KI P Y HE+ + G S +V +I R+G L C W++ N Sbjct: 127 RRKIT-PTY---HERMIWGQGDASGLKVVETEIARVGALAC---WEHYN 168 >gi|326318136|ref|YP_004235808.1| nitrilase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374972|gb|ADX47241.1| Nitrilase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 344 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 22/167 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 L K K A Q PV D + K R EA G L+ F E+F++GYP Sbjct: 4 LPKFKAAAVQAAPVFLDTDATVDKVCRLIAEAAGNGAQLVAFPEVFVAGYPYWSWIANPI 63 Query: 53 ---PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVIL-DA 105 P +S I+ I + +V+G + + G + N++V + D Sbjct: 64 DGSPWFERLARSAIEIPGPEIAKIAQAAARHKTHVVIGVNERSRHGIGTIYNTLVTIGDD 123 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILIC 150 G I+ K+ +P ++ EK T+ G ++ V R LG L C Sbjct: 124 GRILGRHRKL-VPTWA---EKLTWAPGDASALRVHRTSIGPLGSLAC 166 >gi|213421424|ref|ZP_03354490.1| NAD synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 215 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 20/172 (11%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTS 332 L+ Y++ F K +++G+SGG DS L ++ A+ + +T + LPY + Sbjct: 30 LKAYLKTYPFLKSLVLGISGGQDSTLAGKLSQMAITELREETGDNALQFIAVRLPYGVQA 89 Query: 333 -PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIRG 388 Q +DA A + VL ++ + Q L+E E S V N ++R R Sbjct: 90 DEQDCQDAIAFIQP----DRVLTVN--IKGAVLASEQALREAGIELSDFVRGNEKARERM 143 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 +++ + +++ T + +E G+ T YGD NPL L K Q QL Sbjct: 144 KAQYSIAGMTHGVVVGTDHAAEAITGFFTKYGDGGTDINPLHRLNKRQGKQL 195 >gi|291288176|ref|YP_003504992.1| Queuosine synthesis-like protein [Denitrovibrio acetiphilus DSM 12809] gi|290885336|gb|ADD69036.1| Queuosine synthesis-like protein [Denitrovibrio acetiphilus DSM 12809] Length = 223 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + ++ I+ LSGG DSA +A + +GK NV + ++ LE+AA A LG + Sbjct: 6 SKYNNAIVALSGGADSAAVLMLAAEHIGKNNVLAVTCVNQHFFESELENAAKIAAILGVR 65 Query: 350 YDVLPIHDLVNHFF 363 + + ++ N F+ Sbjct: 66 HQSYTV-EMPNEFY 78 >gi|156044142|ref|XP_001588627.1| hypothetical protein SS1G_10174 [Sclerotinia sclerotiorum 1980] gi|154694563|gb|EDN94301.1| hypothetical protein SS1G_10174 [Sclerotinia sclerotiorum 1980 UF-70] Length = 324 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 19/163 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE-------- 54 + +++A+ Q PV D+ + K +EA+ G L+ F E +I GYP Sbjct: 9 RHVRVAVTQFEPVWLDLQKTVDKTCVLIKEASANGAQLVSFPECWIPGYPSWIWARSVDF 68 Query: 55 DL--VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR 112 DL + K+ ++ S + + + + +V+GF + S I+D +I + Sbjct: 69 DLSTTYIKNSLRVDSPEMKRICTAAKESNISVVLGFSENFNHSLYISQAIIDQEGVIQIS 128 Query: 113 DKINLPNYSEFHEKRTFI---SGYSNDPIVFRD--IRLGILIC 150 + P H +RT SG S +V R+G+L C Sbjct: 129 RRKLKPT----HMERTVFGEASGSSLKNVVELPGLGRVGVLAC 167 >gi|289550342|ref|YP_003471246.1| Aliphatic amidase amiE [Staphylococcus lugdunensis HKU09-01] gi|289179874|gb|ADC87119.1| Aliphatic amidase amiE [Staphylococcus lugdunensis HKU09-01] Length = 261 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/179 (20%), Positives = 78/179 (43%), Gaps = 11/179 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q N D+ N K + + +Q D+++ E++ +GY E L K F Sbjct: 1 MKLQLLQFNVAYADVNANEHKIKTWFSNSLQQDTDVVILPEMWNNGYALEQLEEKADF-- 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE 122 + D +K+ I+ G + + + N+ +D G +I DK++L Sbjct: 59 DLERSTDFIKNLALQYQVDIIAGSVSNKHHDHIFNTAFAIDKTGKVINQYDKMHL---VP 115 Query: 123 FHEKRTFISGYSNDPIVFR---DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 ++ F++ N P F+ +++ +IC D+ + + ++ + GA F + P Sbjct: 116 MLDEPAFLTAGKNVPETFKLSNGVKVTQMICYDL-RFPELLRYPARSGATIAFYVAQWP 173 >gi|239927930|ref|ZP_04684883.1| hydrolase [Streptomyces ghanaensis ATCC 14672] gi|291436267|ref|ZP_06575657.1| hydrolase [Streptomyces ghanaensis ATCC 14672] gi|291339162|gb|EFE66118.1| hydrolase [Streptomyces ghanaensis ATCC 14672] Length = 280 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 21/242 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPED 55 M ++ A+ Q GD +AK EA RQG +I F E+F S Y PE Sbjct: 1 MANVVRAALVQAT-WTGDTESMLAKHEEHAREAARQGARIIGFQEVFNSPYFCQVQDPEH 59 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDA-GNIIAVRD 113 + + + + ++ + G +VV +Q G N+ ++DA G ++ Sbjct: 60 YRWAEPVPDGPT--VRRMRELARETGMVVVVPVFEVEQSGFYYNTAAVIDADGTVLGKYR 117 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLF 172 K ++P F EK F G P+ + ++G+ IC D + L GA+ ++ Sbjct: 118 KHHIPQVKGFWEKFYFRPGNLGWPVFDTAVGKVGVYICYDR-HFPEGWRQLGINGAQLVY 176 Query: 173 SLNASPYYHNKLKK---RHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQ 227 + +A+ H L R E +++ + + +N+VG ++ + F G S+ D + Sbjct: 177 NPSAT---HRGLSSHLWRLEQPAAAVANEYF-VAAINRVGQEEYGDNDFYGTSYFVDPRG 232 Query: 228 QL 229 Q Sbjct: 233 QF 234 >gi|315660196|ref|ZP_07913052.1| carbon-nitrogen family hydrolase [Staphylococcus lugdunensis M23590] gi|315494762|gb|EFU83101.1| carbon-nitrogen family hydrolase [Staphylococcus lugdunensis M23590] Length = 261 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/179 (20%), Positives = 78/179 (43%), Gaps = 11/179 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q N D+ N K + + +Q D+++ E++ +GY E L K F Sbjct: 1 MKLQLLQFNVAYADVNANEHKIKTWFSNSLQQDTDVVILPEMWNNGYALEQLEEKADF-- 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE 122 + D +K+ I+ G + + + N+ +D G +I DK++L Sbjct: 59 DLERSTDFIKNLALQYQVDIIAGSVSNKHHDHIFNTAFAIDKTGKVINQYDKMHL---VP 115 Query: 123 FHEKRTFISGYSNDPIVFR---DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 ++ F++ N P F+ +++ +IC D+ + + ++ + GA F + P Sbjct: 116 MLDEPAFLTAGKNVPETFKLSNGVKVTQMICYDL-RFPELLRYPARSGATIAFYVAQWP 173 >gi|68249737|ref|YP_248849.1| PP-loop superfamily ATPase [Haemophilus influenzae 86-028NP] gi|81335834|sp|Q4QLA8|QUEC_HAEI8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|68057936|gb|AAX88189.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 86-028NP] Length = 227 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKEN++ I Y LE A A + LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIVQDLGIK 66 >gi|254302170|ref|ZP_04969528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322362|gb|EDK87612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 343 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 10/123 (8%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV+IG+SGG+DS++ A + + G E + + + + + +EDA LG ++V+ Sbjct: 3 KVVIGISGGVDSSVSAYLLKEQ-GYEVIGVTLNQHLEENSKDIEDAKKVCNKLGISHEVI 61 Query: 354 PI-----HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 I + ++ +F S + P I + I+ + IL +++ KA + T + Sbjct: 62 NIRKDFENTVIKYFLDGYSTGITPSPCVICDDEIKFK----ILFDIADKYKAEYVATGHY 117 Query: 409 SEI 411 + + Sbjct: 118 TSV 120 >gi|323341219|ref|ZP_08081466.1| carbon-nitrogen family hydrolase [Lactobacillus ruminis ATCC 25644] gi|323091413|gb|EFZ34038.1| carbon-nitrogen family hydrolase [Lactobacillus ruminis ATCC 25644] Length = 259 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 31/233 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-------- 56 +K++IAQ++ G+++ N + A ++A D+I+ E++ +GY + L Sbjct: 1 MKVSIAQIDIAFGNVSKNYERTANALQKALANHPDVIVLPEMWNTGYALDQLDELADENG 60 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKI 115 ++F+ A + K D + G V + Q N+ D G +I DK+ Sbjct: 61 ERTRNFLSAFAK-----KHDVNIVGGSCAV----KRQGKFWNTAYDFDRKGQLINEYDKV 111 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI----WKNSNICKHLKKQGAEFL 171 +L + E R G S I+ +IC DI W+ + L GA+ L Sbjct: 112 HL--FGLMQEDRFIAPGNSESSFEIDGIKSSCVICYDIRFPEWE-----RKLMSSGAKIL 164 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 F ++ + ++K+ ++ + ++ N+VG F+G S D Sbjct: 165 FV--SAQWPDVRIKQWEILLRARAIENQAFVVAANRVGDAPNDHFNGHSLIID 215 >gi|196049679|pdb|2VXO|A Chain A, Human Gmp Synthetase In Complex With Xmp gi|196049680|pdb|2VXO|B Chain B, Human Gmp Synthetase In Complex With Xmp Length = 697 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 209 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 262 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + K LG + V+ Sbjct: 263 ALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 301 >gi|254382864|ref|ZP_04998220.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces sp. Mg1] gi|194341765|gb|EDX22731.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Streptomyces sp. Mg1] Length = 250 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 16/156 (10%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + +KIA AQL V D+ N A A A QG +L++F EL ++GY E L Sbjct: 13 EPVKIAAAQLTCVPADVPANTALAAALAGRAREQGAELVVFPELALTGYELEALTADPGL 72 Query: 63 --IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 A +D L+S AGI + G + ++ D ++ Y Sbjct: 73 WVADADDPRLDPLRS------AGIATAVNVALRTGGPRPAIA----TLVYGADGAHVTTY 122 Query: 121 SE----FHEKRTFISGYSNDPIVFRDIRLGILICED 152 ++ HE+ F +G ++ IR + +C D Sbjct: 123 AKRHLFRHEQGVFAAGDTDGRFELGGIRFSLGVCYD 158 >gi|148826200|ref|YP_001290953.1| PP-loop superfamily ATPase [Haemophilus influenzae PittEE] gi|229846222|ref|ZP_04466334.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 7P49H1] gi|189038917|sp|A5UCR9|QUEC_HAEIE RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|148716360|gb|ABQ98570.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae PittEE] gi|229811226|gb|EEP46943.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 7P49H1] Length = 227 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKEN++ I Y LE A A + LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIVQDLGIK 66 >gi|322517513|ref|ZP_08070384.1| NH(3)-dependent NAD(+) synthetase [Streptococcus vestibularis ATCC 49124] gi|322123865|gb|EFX95431.1| NH(3)-dependent NAD(+) synthetase [Streptococcus vestibularis ATCC 49124] Length = 273 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 39/230 (16%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALC---AAIAVDALGKE---NVQ--TIMLPYKYTSP 333 L+ Y+ K+ F K ++G+SGG DS L A +AV+ L E N Q I LPY Sbjct: 30 LKAYMLKHPFLKSYVLGISGGQDSTLAGRLAQLAVEELRAETGKNYQFIAIRLPY---GV 86 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE-----NIQSRIRG 388 Q+ ED A A A K DV VN ++ Q + +G+ NI++R R Sbjct: 87 QADEDDAQRALAF-IKPDV---SLAVNIKEAVDGQVAELARAGVSISDFNKGNIKARQRM 142 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 A++ + ++ T + +E G+ T +GD PL L K R Sbjct: 143 ITQYAVAGENSGAVIGTDHAAENLTGFFTKFGDGGADILPLFRLNK---------RQGAA 193 Query: 449 ITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIK 494 + + LG ++ EK P+A+L +P D+ +L Y +DD ++ Sbjct: 194 LLAELGA-----DKALYEKVPTADLEEDKPGIADEVALGVTYREIDDYLE 238 >gi|110825738|sp|P44124|QUEC_HAEIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC Length = 228 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 31/64 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K I+ SGG DS C A+ GKEN++ I Y LE A A+ LG K Sbjct: 7 NHDRKAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQDLGIK 66 Query: 350 YDVL 353 ++ Sbjct: 67 QTLI 70 >gi|116753735|ref|YP_842853.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanosaeta thermophila PT] gi|116665186|gb|ABK14213.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanosaeta thermophila PT] Length = 245 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 30/205 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKK 60 ++ A QL+ D+ N +A + + G D+I+ ELF++G+ PE + + Sbjct: 1 MRAACVQLSVRECDVGDNKRRALQLSSDVADIGADIIVLPELFLTGFCYDLKPESIPYP- 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ + ++ + D GA +V G +N + Y Sbjct: 60 --------SLMSFRALSLDSGAILVGSIMASSDRGPINMGFCMAGAET---------GFY 102 Query: 121 SEFH----EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + H EK+ FI G P+ + +G+ IC DI + + + L GA+ L ++ Sbjct: 103 CKTHPFGDEKKHFIPGEIIAPVKVGGLSIGLEICYDI-RFPEVARKLCASGADLLVTIAQ 161 Query: 177 SP---YYHNKLKKRHEIVTGQISHV 198 P +H + + QI H+ Sbjct: 162 FPAERIHHWRALVTARAIENQIHHI 186 >gi|322391687|ref|ZP_08065155.1| NH(3)-dependent NAD(+) synthetase [Streptococcus peroris ATCC 700780] gi|321145498|gb|EFX40891.1| NH(3)-dependent NAD(+) synthetase [Streptococcus peroris ATCC 700780] Length = 274 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 10/167 (5%) Query: 283 LRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS---PQSLE- 337 L+ Y++K+ F K ++G+SGG DS+L +A A+ + +T YK+ + P ++ Sbjct: 30 LKRYLKKHPFLKSFVLGISGGQDSSLSGRLAQLAMEEMRAETGDDSYKFIAVRLPYGVQA 89 Query: 338 DAAACAKALG-CKYDV---LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 D KAL + DV + I D V+ + + + S NI++R R A Sbjct: 90 DEDDAQKALHFIQPDVSLVVNIKDSVDAMVAAV-EATGSSMSDFNKGNIKARSRMIAQYA 148 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 L+ ++ T + +E G+ T +GD PL L K Q QL Sbjct: 149 LAGAHSGAVIGTDHAAENVTGFFTKFGDGGADILPLYRLNKRQGKQL 195 >gi|302879254|ref|YP_003847818.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Gallionella capsiferriformans ES-2] gi|302582043|gb|ADL56054.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Gallionella capsiferriformans ES-2] Length = 278 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 20/150 (13%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++AGN+++A+R A QG L++ E F I G +D + A S I SD Sbjct: 25 NVAGNLSEAKRLIARAAEQGARLVVLPEFFAIMGMNEKDKAAVREM--AGSGPIQQFLSD 82 Query: 77 THDG------GAGIVVGFPRQDQEGVLNSVVIL-DAGNIIAVRDKINLPNYS----EFHE 125 T G I + D+ VLNS ++ + G +A DKI+L N S + E Sbjct: 83 TARQYKIWLVGGSIPLAASVPDK--VLNSCLVFNEEGQQVARYDKIHLFNLSMGNESYDE 140 Query: 126 KRTFISGYSNDPIVFRDI--RLGILICEDI 153 +T +G N +V R+G+ IC D+ Sbjct: 141 AQTIEAG--NQVVVIDSPFGRIGLAICYDL 168 >gi|78187371|ref|YP_375414.1| carbon-nitrogen hydrolase family protein [Chlorobium luteolum DSM 273] gi|78167273|gb|ABB24371.1| carbon-nitrogen hydrolase family protein [Chlorobium luteolum DSM 273] Length = 292 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 16/137 (11%) Query: 98 NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFIS---GYSNDPIVFRDIRLGILICEDI 153 N+ V++DA G+++ K+++P+ F+EK F GY + DI G+LIC D Sbjct: 101 NTAVVVDADGSLLGRYRKMHIPDDPGFYEKFYFTPGDLGYKVFRTRYADI--GVLICWDQ 158 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLK---KRHEIV---TGQISHVHLPIIYV-- 205 W + +GAE +F A + + +R ++ T Q SH ++V Sbjct: 159 W-YPEAARLTALKGAEIIFYPTAIGWAAGESSEEVRRSQLAAWKTIQQSHSVANGVFVAA 217 Query: 206 -NQVGGQDELIFDGASF 221 N+VG + +L F G SF Sbjct: 218 ANRVGREGDLEFWGNSF 234 >gi|170289597|ref|YP_001739835.1| PP-loop domain-containing protein [Thermotoga sp. RQ2] gi|170177100|gb|ACB10152.1| PP-loop domain protein [Thermotoga sp. RQ2] Length = 268 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K+++ SGG+DS L A +A +ALGK N + + + +E+A A +G +++ + Sbjct: 16 KLVVMFSGGVDSTLLAKLAYEALGK-NAVALTIDSPVIPRKEIEEAKNLANLIGIRHEFI 74 Query: 354 PIHDL 358 +++L Sbjct: 75 ELNEL 79 >gi|126133855|ref|XP_001383452.1| Carbon-nitrogen hydrolase [Scheffersomyces stipitis CBS 6054] gi|126095601|gb|ABN65423.1| Carbon-nitrogen hydrolase [Scheffersomyces stipitis CBS 6054] Length = 357 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 6/104 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L++A QLNP +G++ NI K N +DL++ EL I+GY + + ++ Sbjct: 6 RLRVACVQLNPRIGEVEANIRKVHTIL--VNVPKVDLVVLPELAITGYNFPNRRAIEPYL 63 Query: 64 QACS----SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL 103 + + +I K ++ ++G+P + NS V++ Sbjct: 64 ENLALENGPSIKLAKEISNKYKCFTLIGYPEISNSTIYNSAVLV 107 >gi|121534534|ref|ZP_01666356.1| ExsB family protein [Thermosinus carboxydivorans Nor1] gi|121306786|gb|EAX47706.1| ExsB family protein [Thermosinus carboxydivorans Nor1] Length = 277 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE-DAAACAKALGCKYDVL 353 +IG SGG DSA AA A LG+ V Y T P+S +AA A+ +G ++ +L Sbjct: 21 AVIGFSGGTDSAFLAAAAYRVLGERAVAVTC--YSATLPESERMEAAITARQIGIRHVLL 78 Query: 354 PIHDL 358 P ++L Sbjct: 79 PQNEL 83 >gi|184156205|ref|YP_001844545.1| hypothetical protein LAF_1729 [Lactobacillus fermentum IFO 3956] gi|183227549|dbj|BAG28065.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] Length = 275 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 7/76 (9%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM------LPYKYTSPQSLEDAAACAKA 345 ++KV++ SGGIDS + A+ LGKENV ++ +YT L A Sbjct: 16 YNKVLVAFSGGIDSTVVLDAALKTLGKENVLAVVANSDLFTDEEYTKAMDLAQEMG-ATV 74 Query: 346 LGCKYDVLPIHDLVNH 361 LG D L D+ N+ Sbjct: 75 LGTTLDYLANDDIKNN 90 >gi|17546542|ref|NP_519944.1| nitrilase [Ralstonia solanacearum GMI1000] gi|17428840|emb|CAD15525.1| hypothetical protein RSc1823 [Ralstonia solanacearum GMI1000] Length = 343 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 20/147 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 L + K A Q PV D + K R +EA G L+ F E+F++GYP Sbjct: 4 LPQFKAAAVQAAPVFLDTDATVDKVCRLIQEAAENGARLVAFPEVFVAGYPYWSWIMNPV 63 Query: 53 ---PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV---LNSVV-ILDA 105 P +S I+ I + +V+G + + G+ N++V I D Sbjct: 64 EGSPWFEKLARSAIELPGPEIAKIAQAAARHRINVVIGVNERSRYGIGTLYNTIVTIADD 123 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISG 132 G I+ K+ +P ++ EK T+ G Sbjct: 124 GRILGRHRKL-VPTWA---EKLTWAPG 146 >gi|156097538|ref|XP_001614802.1| NAD synthase [Plasmodium vivax SaI-1] gi|148803676|gb|EDL45075.1| NAD synthase, putative [Plasmodium vivax] Length = 867 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 36/209 (17%) Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 ++ L A A+ + + T+ LP K +S + A + A+ + V I L F Sbjct: 571 LERLLIDAPCRKAICNKLLNTLCLPSKNSSENTKSYAEQLSSAINSYHTVYCIDGLFAFF 630 Query: 363 FSLMSQFLQEEPS----------GIVAENIQSRIRGNILMA--------------LSNHS 398 S FL+EE + +N+QSR R +LMA L+ H+ Sbjct: 631 KSAGRDFLKEEMKFKSQGGSTYEDLCLQNVQSRSR--LLMAYFFSPLICQQRYAPLNLHN 688 Query: 399 KAML-LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 + +L + T N E GY T Y SG N + ++ K + + + + + Sbjct: 689 EFLLTIATGNLDETLTGYYTKYDCSSGDINLIGNVSKILI------KETMCLLANDPSYD 742 Query: 458 EVIPPSILEKSPSAELRP---HQTDQESL 483 + SI + PSAEL+P +QTD++ L Sbjct: 743 LSVCNSINQFHPSAELKPLENNQTDEDEL 771 >gi|332519090|ref|ZP_08395557.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lacinutrix algicola 5H-3-7-4] gi|332044938|gb|EGI81131.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lacinutrix algicola 5H-3-7-4] Length = 316 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 29/52 (55%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 M LKIA+AQ++PV+ + + K EA G +LI+F E + GYP Sbjct: 1 MKNTLKIAMAQISPVLLNKVETLKKVEDTIVEAGMLGCELIVFGEALVPGYP 52 >gi|312277867|gb|ADQ62524.1| Hydrolase in agr operon [Streptococcus thermophilus ND03] Length = 262 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 23/250 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +KIA+ Q++ G N + E A D+I+ E++ +GY ++L + K Sbjct: 1 MKIALVQMDVAHGQPVENKKHVKEMLERALVANPDVIVLPEMWNTGYALDELDGLADKEG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNY 120 +++ + L + I+ G +++G + V +GN+I + K++L + Sbjct: 61 LESQ----EFLSQFAREHAVAILGGSVAIERDGKFYNTTYVYNKSGNLINIYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDI----WKNSNICKHLKKQGAEFLFSLNA 176 E R +G + + +IC DI W + + QGA+ LF + Sbjct: 115 GLMAEDRYMSAGDAESIFELDGVIAASVICYDIRFPEWVRTQMA-----QGAKVLFVVAQ 169 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQD-ELIFDGASFCFDGQQQLAFQMK 234 P ++++ ++ + ++ VN+VG G D + +F G S D + Q K Sbjct: 170 WP--EPRVQQWEILLKARAVENQAFVVAVNRVGAGPDPDDVFSGHSMIIDPLGNVVLQAK 227 Query: 235 HFSEQNFMTE 244 + E F E Sbjct: 228 EYEEGIFTAE 237 >gi|262306047|gb|ACY45616.1| gln amidotransferase [Eurypauropus spinosus] Length = 197 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 10/101 (9%) Query: 255 NYMSD--DSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 N++ D + T I +EE+ C+ +++ V +N KV++ +SGG+DS +C A+ Sbjct: 12 NFLYDVAGCSGTFTIKSREEQ-----CIQYIKNTVGRN---KVLMLVSGGVDSTVCVALL 63 Query: 313 VDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 ALG ENV + + + + + +G + V+ Sbjct: 64 HKALGAENVIALHIDNGFMRKNESQQVEXSLRKIGLQIKVV 104 >gi|94039555|dbj|BAE93551.1| NAD synthase NadE [Eggplant dwarf phytoplasma] Length = 114 Score = 39.3 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Query: 34 NRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAID-TLKSDTHDGGAGIVVGFPRQD 92 N+ +LF EL +S Y DL F+ +F++ A+D LK+++ +G ++G P Sbjct: 33 NKSKASFVLFPELCLSSYTAGDLFFETTFLEQNFQALDWLLKNNSFEG--VYILGMPLAL 90 Query: 93 QEGVLNSVVILDAGNIIAVRDK 114 E + N VI+ I+ + K Sbjct: 91 HEVLFNVAVIIQKDKILGITPK 112 >gi|113475320|ref|YP_721381.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Trichodesmium erythraeum IMS101] gi|110166368|gb|ABG50908.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Trichodesmium erythraeum IMS101] Length = 271 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 21/182 (11%) Query: 16 VGDIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLK 74 V D+A N+ +A + A RQG +L+ E F G E + ++ + + T+ Sbjct: 14 VPDLAKNLLQAEELIDLAIRQGAELVTLPENFSFLGGEEEKISQAEAIAKESEKFLKTIA 73 Query: 75 SD---THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD-------KINLPNYSEFH 124 T GG G+P G + +V L N I V +NLP+ + + Sbjct: 74 QKYQITILGG-----GYPVPTTNGKVYNVASLIEPNGIEVARYEKAHLFDVNLPDGNTYQ 128 Query: 125 EKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 E T +G P V+ LGI +C D+ + + +HL GAE LF A Y Sbjct: 129 ESNTVKAGM-KLPSVYESKDYGNLGISVCYDV-RFPELYRHLSNAGAEVLFIPAAFTAYT 186 Query: 182 NK 183 K Sbjct: 187 GK 188 >gi|86605284|ref|YP_474047.1| PP-loop family protein [Synechococcus sp. JA-3-3Ab] gi|86553826|gb|ABC98784.1| PP-loop family protein [Synechococcus sp. JA-3-3Ab] Length = 274 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +V++ SGG+DS+L A +A D LG E + P+ LE+A A+++G ++ ++ Sbjct: 18 RVLVAYSGGVDSSLVAKLAWDQLG-EGALAVTAASPALLPEDLEEAIWQAQSIGIRHQIV 76 Query: 354 PIHDLVNHFFS 364 +L + ++ Sbjct: 77 ETQELQDPRYA 87 >gi|256852267|ref|ZP_05557653.1| NAD+ synthetase [Lactobacillus jensenii 27-2-CHN] gi|260661700|ref|ZP_05862611.1| NAD+ synthetase [Lactobacillus jensenii 115-3-CHN] gi|282932289|ref|ZP_06337726.1| NAD+ synthetase [Lactobacillus jensenii 208-1] gi|297205565|ref|ZP_06922961.1| NAD(+) synthase [Lactobacillus jensenii JV-V16] gi|256615313|gb|EEU20504.1| NAD+ synthetase [Lactobacillus jensenii 27-2-CHN] gi|260547447|gb|EEX23426.1| NAD+ synthetase [Lactobacillus jensenii 115-3-CHN] gi|281303572|gb|EFA95737.1| NAD+ synthetase [Lactobacillus jensenii 208-1] gi|297150143|gb|EFH30440.1| NAD(+) synthase [Lactobacillus jensenii JV-V16] Length = 276 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 33/230 (14%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 +P + E + V L+DY++ + F K +++G+SGG DS L + A+ + +T Sbjct: 15 LPEIDPEKEIRRSVDFLKDYLKAHPFLKSLVLGISGGQDSTLTGKLCQIAIDELRAETGN 74 Query: 326 LPYKYTS---PQSLEDAAACAKALGC--KYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVA 379 YK+ + P +++ A+ A K DV DL+ + + + ++ E +G+ Sbjct: 75 QEYKFIAIRLPYGVQNDASDAADAVAFQKPDV----DLIVNIKDAVDKTVESLEKAGVKV 130 Query: 380 E-----NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 NI++R R + ++ ++ T + +E G+ T YGD + PL Sbjct: 131 TDFNKGNIKARQRMIVQYGIAGAYSGAVVGTDHAAENITGFYTKYGDGASDLVPL----- 185 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 F+L R + LG P + K+P+A+L + D LP Sbjct: 186 ---FRLDK-RQGKALLKYLG-----CPEHLYLKAPTADL---EEDAPDLP 223 >gi|124009905|ref|ZP_01694571.1| asparagine synthase (glutamine-hydrolyzing) [Microscilla marina ATCC 23134] gi|123984056|gb|EAY24429.1| asparagine synthase (glutamine-hydrolyzing) [Microscilla marina ATCC 23134] Length = 636 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 13/118 (11%) Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED--AAACAKALGCKYDVLPI- 355 LSGGIDS++ A +A A + + T + YK P E A AK +G K+ V + Sbjct: 266 LSGGIDSSVIATLA--ARHTDQLHTFSIGYK-DEPFFDETNYAQLVAKKIGAKHTVFSVS 322 Query: 356 -HDLVNHFFSLMSQFLQEEP----SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 D+++H + +++ +EP S I + R + ++ +ALS L + NK Sbjct: 323 NQDMLDHIYEILNYI--DEPFADSSAIAVYILSQRTKAHVTVALSGDGADELFSGYNK 378 >gi|12483930|gb|AAG53900.1| MLL/GMPS fusion protein [Homo sapiens] Length = 551 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 338 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 391 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + K LG + V+ Sbjct: 392 ALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 430 >gi|327266954|ref|XP_003218268.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Anolis carolinensis] Length = 707 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + +RD +K KV++ LSGG+DS +C A+ Sbjct: 219 NFLYDIAGCSGTFTVQNRELE------CIRDIKEKVGSSKVLVLLSGGVDSTVCTALLNR 272 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 273 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVV 311 >gi|262197925|ref|YP_003269134.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Haliangium ochraceum DSM 14365] gi|262081272|gb|ACY17241.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Haliangium ochraceum DSM 14365] Length = 332 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 28/176 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------- 52 M +K A QL+PV+ A+ A EA +G +L++F E FI YP Sbjct: 1 MAPIVKAAAVQLSPVLYSQEKTTARVCEAMAEAAARGAELVVFPETFIPYYPYFSFIQAP 60 Query: 53 ----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GN 107 E + + ++ A+ L + D G VG +D V N+ +I+D G+ Sbjct: 61 AAMGKEHMRLYEQAMEIPGPALTALCNAARDSGVVAAVGVNERDHGTVYNAQLIIDRDGS 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSN 158 ++ R KI FHE+ + G D R + R+G L C W++ N Sbjct: 121 LVLHRRKIT----PTFHERMVWGQG---DGAGLRAVDTAVGRVGALAC---WEHYN 166 >gi|194374669|dbj|BAG62449.1| unnamed protein product [Homo sapiens] Length = 642 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 154 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 207 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + K LG + V+ Sbjct: 208 ALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 246 >gi|332818176|ref|XP_003310106.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 1 [Pan troglodytes] Length = 693 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + K LG + V+ Sbjct: 259 ALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|194097759|ref|YP_002000800.1| YbaX [Neisseria gonorrhoeae NCCP11945] gi|239998262|ref|ZP_04718186.1| YbaX [Neisseria gonorrhoeae 35/02] gi|240122816|ref|ZP_04735772.1| YbaX [Neisseria gonorrhoeae PID332] gi|268594117|ref|ZP_06128284.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 35/02] gi|268681430|ref|ZP_06148292.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID332] gi|293397674|ref|ZP_06641880.1| exsB protein [Neisseria gonorrhoeae F62] gi|254764362|sp|B4RQ61|QUEC_NEIG2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|193933049|gb|ACF28873.1| YbaX [Neisseria gonorrhoeae NCCP11945] gi|268547506|gb|EEZ42924.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 35/02] gi|268621714|gb|EEZ54114.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID332] gi|291611620|gb|EFF40689.1| exsB protein [Neisseria gonorrhoeae F62] gi|317163544|gb|ADV07085.1| YbaX [Neisseria gonorrhoeae TCDC-NG08107] Length = 219 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 12/89 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLGVSQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI 377 L + SLM Q L +E + I Sbjct: 64 LDL--------SLMRQITHNALMDETAAI 84 >gi|40890291|gb|AAR97490.1| nitrilase [uncultured organism] Length = 353 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 26/49 (53%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K K+A Q P D+ ++ KA R +EA G LI F E +I GYP Sbjct: 7 KYKVAAVQAAPAFLDLDASVEKAVRFIDEAGAAGARLIAFPETWIPGYP 55 >gi|4504035|ref|NP_003866.1| GMP synthase [glutamine-hydrolyzing] [Homo sapiens] gi|1708072|sp|P49915|GUAA_HUMAN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|595410|gb|AAA60331.1| guanosine 5'-monophosphate synthetase [Homo sapiens] gi|15082535|gb|AAH12178.1| Guanine monphosphate synthetase [Homo sapiens] gi|119599147|gb|EAW78741.1| guanine monphosphate synthetase, isoform CRA_b [Homo sapiens] gi|124000223|gb|ABM87620.1| guanine monphosphate synthetase [synthetic construct] gi|157929256|gb|ABW03913.1| guanine monphosphate synthetase [synthetic construct] gi|158256440|dbj|BAF84193.1| unnamed protein product [Homo sapiens] gi|164691081|dbj|BAF98723.1| unnamed protein product [Homo sapiens] Length = 693 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + K LG + V+ Sbjct: 259 ALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|62898359|dbj|BAD97119.1| guanine monophosphate synthetase variant [Homo sapiens] Length = 693 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + K LG + V+ Sbjct: 259 ALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|197099468|ref|NP_001124563.1| GMP synthase [glutamine-hydrolyzing] [Pongo abelii] gi|75041859|sp|Q5RA96|GUAA_PONAB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|55729155|emb|CAH91314.1| hypothetical protein [Pongo abelii] Length = 693 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + K LG + V+ Sbjct: 259 ALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|262306109|gb|ACY45647.1| gln amidotransferase [Stenochrus portoricensis] Length = 196 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 22/179 (12%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ + S + +Q E + C+ +R + N KV++ LSGG+DS +CAA+ Sbjct: 12 NFLFELSGLSGTFTMQSRELE---CIEYIRKIIGSN---KVLMLLSGGVDSTVCAALLHK 65 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ--FLQE 372 AL ++ V I + + K LG K V+ D + F++ + ++ Sbjct: 66 ALKEDQVIAIHINNGFMRKNESLQVEQSLKRLGLKLKVI---DSSHTFYNGTTTVPIDKK 122 Query: 373 EPSGIVAENI---------QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 +PS + + +I G+ M ++N L N+ E+ +G GTL D+ Sbjct: 123 DPSRKKTTQLLCLTTNPEEKRKIIGDTFMKVANEVIGEL--NLNQDEVFLGQGTLRPDL 179 >gi|188590722|ref|YP_001922442.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium botulinum E3 str. Alaska E43] gi|188501003|gb|ACD54139.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium botulinum E3 str. Alaska E43] Length = 259 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 13/140 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYP---PEDLVFKKSFIQACSSAIDTLK 74 D N+ K EEA+ +G++LILF E+ ++G + + + I+ C + +K Sbjct: 14 DELANMRKVETLVEEASMKGVELILFPEMTLTGVTLNIDKLTLLQDKIIEWCRAL--AIK 71 Query: 75 SDTHDGGAGIVVGF-PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY 133 ++ + G +G+ R D + + N +VI + G +I KI+L Y E T+ +G Sbjct: 72 NNINIG-----IGYGKRIDSKALNNYIVISNYGEVITDYTKIHLFTYG--GEPTTYYNGI 124 Query: 134 SNDPIVFRDIRLGILICEDI 153 + + + L IC D+ Sbjct: 125 NIENYKIGEFSLSSFICYDL 144 >gi|332818178|ref|XP_003310107.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 2 [Pan troglodytes] Length = 594 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 106 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 159 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + K LG + V+ Sbjct: 160 ALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 198 >gi|331698023|ref|YP_004334262.1| nitrilase [Pseudonocardia dioxanivorans CB1190] gi|326952712|gb|AEA26409.1| Nitrilase [Pseudonocardia dioxanivorans CB1190] Length = 335 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 24/168 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 L + A Q PV D A +AKA EA +G L+ F E F+ GYP Sbjct: 4 LPRFTAAAVQAAPVYLDAAATVAKAADLVAEAAGRGATLVAFPEAFVPGYPYWNWTMNPV 63 Query: 53 ---PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVL--NSVVILDA 105 P ++ I +DTL + G +VVG + GV+ + I Sbjct: 64 QGSPWFERLYRNAIDVPGPEVDTLCAAARRHGVTVVVGVNERGAHSMGVIYNTMLTISHT 123 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILIC 150 G +I V K+ +P ++ EK T+ G + +V D RLG+L C Sbjct: 124 GELIGVHRKL-VPTWA---EKLTWTGGDGSS-LVVHDTPVGRLGVLAC 166 >gi|145251712|ref|XP_001397369.1| cyanide hydratase [Aspergillus niger CBS 513.88] gi|134082906|emb|CAK46742.1| unnamed protein product [Aspergillus niger] Length = 337 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 10/129 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 K+++A+ Q PV D+ + K R EA G LI F E ++ GYP P D+ Sbjct: 6 KVRVAVTQHEPVWLDLHATVDKTCRLIAEAAGNGAQLITFPECWLPGYPAWIWCRPVDMG 65 Query: 58 FKKSFIQAC----SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 ++++ S + + + +V+G +D + +D+ I +R Sbjct: 66 LFTTYLKNSLSYDSEHMRRICNAAAQHKITVVLGLSERDGNSLYIGQCTIDSTGKIVMRR 125 Query: 114 KINLPNYSE 122 + P + E Sbjct: 126 RKMKPTHME 134 >gi|328715380|ref|XP_001943073.2| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like isoform 1 [Acyrthosiphon pisum] Length = 682 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%) Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 Q L + Y A + + +E+E C+ +RD V ++ KV++ LSGG+DS +C Sbjct: 190 QMLKSFLYDVAGLAGSYTVKSREQE-----CIKYIRDQVGQS---KVLVLLSGGVDSTVC 241 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 AA+ AL +E V + + + E ALG Sbjct: 242 AALLHRALDREQVIAVHIDNGFMRLGESEQVMKSLNALG 280 >gi|302379921|ref|ZP_07268401.1| hydrolase, carbon-nitrogen family [Finegoldia magna ACS-171-V-Col3] gi|302312310|gb|EFK94311.1| hydrolase, carbon-nitrogen family [Finegoldia magna ACS-171-V-Col3] Length = 244 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 46/236 (19%), Positives = 94/236 (39%), Gaps = 25/236 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF-- 62 +KI++ + + D N+ + + ++ G D+ +F E F+ G+ V+K Sbjct: 1 MKISLCAVEQRLNDKVFNMKQIEKYAKQEAENGADMCVFGESFLQGFECLSFVYKDDVGV 60 Query: 63 -IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS-VVILDAGNIIAVRDKIN---- 116 + S+ I ++ + I G+ D +S + + G II +++ Sbjct: 61 PVTQNSNEIAEIRRIARENEVAISFGYIENDHGAFYSSQMTVTKRGEIINNYRRMSTGWK 120 Query: 117 -LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 L S++ E + Y D + F LIC D W + N+ ++ ++ L Sbjct: 121 ELSACSDYREGSK-LYLYKMDGVSF-----STLICGDFW-DENLYTYISMIDSDILLWPV 173 Query: 173 --SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + +Y N+ E Q V +P+++VN +D+ GA + G+ Sbjct: 174 FVDFSVIDWYKNEF----EDYKKQSQLVPMPVLFVNSFVDEDDRAKGGAYVFYQGK 225 >gi|40890115|gb|AAR97402.1| nitrilase [uncultured organism] Length = 321 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 29/174 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--------EDL 56 K+A Q +PV D A I KA A +G LI+F E FI YP E+ Sbjct: 10 FKVAAVQASPVFLDRAATIDKACDLIAAAGGEGARLIVFPEAFIPSYPDWVWAIPSGEEG 69 Query: 57 VFKKSFIQACSSAIDTLKSDTHD--------GGAGIVVGFPRQDQEG----VLNSVVILD 104 V + + S+++ T+ SD+ D A +V+G ++ E + N+++ +D Sbjct: 70 VLNELYADLLSNSV-TIPSDSTDKLCRAARLANAYVVMGMSERNAEASGASMYNTLLYID 128 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKN 156 A I + + +P E+ + G + V+ +LG LIC W+N Sbjct: 129 AQGEILGKHRKLVPTGG---ERLVWAQGDGSTLQVYDTPLGKLGGLIC---WEN 176 >gi|42557783|emb|CAF28756.1| putative asparagine synthetase [uncultured crenarchaeote] Length = 267 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 +K+ I SGGIDS L A I + N+ T +L + +E + ++ + + V Sbjct: 39 NKIGIAFSGGIDSTLLAKICKNM----NIDTTLLTIGFPDSNDIEFSKTISRKINMNHKV 94 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS-NHSKAMLLTTSNKSEI 411 L I H FS+ S+ +++E + +I++ I + + L+ N+ ++LT + E+ Sbjct: 95 LEID---KHDFSVFSKKIRDEMTCRNLSHIENCIAFSYVAQLAINNGLNVVLTANGFDEL 151 Query: 412 SVGYGTL 418 GY Sbjct: 152 FCGYNNF 158 >gi|255975023|ref|ZP_05425609.1| NAD+ synthase [Enterococcus faecalis T2] gi|307285532|ref|ZP_07565671.1| NAD+ synthetase [Enterococcus faecalis TX0860] gi|255967895|gb|EET98517.1| NAD+ synthase [Enterococcus faecalis T2] gi|306502756|gb|EFM72021.1| NAD+ synthetase [Enterococcus faecalis TX0860] Length = 275 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT-- 323 +P + + + + L+ Y+ K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 LPTIDSKEEVRKSIDFLKAYLTKHPFLKTFVLGISGGQDSTLAGRLAQLAMTEMREETGD 74 Query: 324 -------IMLPYKYTSPQSLEDA--AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 I LPY + ++ A A + + D+ P D + SL + +Q Sbjct: 75 MSYQFIAIRLPYGEQADEADAQAALAFIQPDVSLRVDIKPAVDAM--VGSLENAGVQ--I 130 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 S N+++R R A++ + ++ T + +E + T YGD PL L K Sbjct: 131 SDFNKGNMKARQRMITQYAVAGENAGAVIGTDHAAENVTAFFTKYGDGGADILPLFRLNK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P ++ K P+A+L +P D+ +L Y +D Sbjct: 191 ---------RQGKALLKELGA-----PEALYLKIPTADLEDDKPLVADEVALGVTYDAID 236 Query: 491 DII--KRIVENEESFINN 506 D + K++ E ++ I N Sbjct: 237 DYLEGKKVSETDQQTIEN 254 >gi|302877062|ref|YP_003845695.1| ExsB family protein [Clostridium cellulovorans 743B] gi|307687753|ref|ZP_07630199.1| ExsB family protein [Clostridium cellulovorans 743B] gi|302579919|gb|ADL53931.1| ExsB family protein [Clostridium cellulovorans 743B] Length = 261 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 KV+I SGG+DS +A DALG +NV+ + + Y + +A K LG K+ Sbjct: 19 KVVIAFSGGVDSTFLLRVAKDALG-DNVKAVTILSPYIPRWEIAEAKELVKELGVKH 74 >gi|254493040|ref|ZP_05106211.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 1291] gi|226512080|gb|EEH61425.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 1291] Length = 219 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 12/89 (13%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG V Sbjct: 4 QKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLGVSQTV 63 Query: 353 LPIHDLVNHFFSLMSQF----LQEEPSGI 377 L + SLM Q L +E + I Sbjct: 64 LDL--------SLMRQITHNALMDETAAI 84 >gi|321470457|gb|EFX81433.1| hypothetical protein DAPPUDRAFT_317709 [Daphnia pulex] Length = 369 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 33/193 (17%) Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++S +LQ+ P ++A N+++ NI + S + + +S+++ +G Sbjct: 23 VLSVYLQKIPDSLIALNLKA---CNIYRLYNGRSAETEIRSLLESQVNCPFG-------- 71 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL--------EKSPSAELRPH 476 KDL L +RN G L PL VIP + L + Sbjct: 72 -----KDLLN---HNLVIFRNGDGALQVLPPLVGVIPEAKLNLIIYYLRQDETKEAFDLM 123 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 Q SLP IL I+ ++ E N++EY D ++Y+ HL+ GS + P G Sbjct: 124 QDVNPSLPAEYILKGIVYALIGQE----TNNKEYLDTAIQYL-HLVGGSSSECDTIP-GR 177 Query: 537 KITAKSFGRDRLY 549 + A +F R Y Sbjct: 178 QCVASAFFLQRQY 190 >gi|324520229|gb|ADY47589.1| Bifunctional nitrilase/nitrile hydratase NIT4A [Ascaris suum] Length = 322 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 27/48 (56%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +KIAI Q ++ + + K R EA +QG L+LF E FI GYP Sbjct: 9 IKIAIVQAGTILYNNIDTLKKLRIYANEAAKQGAKLVLFPEAFIGGYP 56 >gi|227536782|ref|ZP_03966831.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sphingobacterium spiritivorum ATCC 33300] gi|227243338|gb|EEI93353.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sphingobacterium spiritivorum ATCC 33300] Length = 318 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 28/50 (56%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY 51 + KLKIA AQ D A N+A + +EA QG D+I F E I+GY Sbjct: 1 MDKLKIATAQFEHKSADKAYNLAVIEQLAKEAASQGADVIAFHECSITGY 50 >gi|40890315|gb|AAR97502.1| nitrilase [uncultured organism] Length = 322 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 29/174 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--------EDL 56 K+A Q PV D I KA A R+G LI+F E FI YP E Sbjct: 10 FKVAAVQATPVFLDREATIDKACELIATAGREGARLIVFPEAFIPSYPEWVWGIPSGEQG 69 Query: 57 VFKKSFIQACSSAIDTLKSDTHD--------GGAGIVVGFPRQDQEG----VLNSVVILD 104 + + + + ++A+ T+ SD D A +V+G ++ E + N+++ +D Sbjct: 70 LLNELYSELLTNAV-TIPSDATDRLCEAAKLANAYVVMGMSERNVEASGASLYNTMLYID 128 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKN 156 A I + + +P E+ + G + V+ +LG LIC W+N Sbjct: 129 AQGEILGKHRKLVPTGG---ERLVWAQGDGSTLQVYDTPLGKLGGLIC---WEN 176 >gi|113478065|ref|YP_724126.1| hypothetical protein Tery_4689 [Trichodesmium erythraeum IMS101] gi|110169113|gb|ABG53653.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101] Length = 281 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K +I SGGIDS L A +A D LG + I P+ LEDA A +G ++ Sbjct: 16 MEKALIAYSGGIDSTLVAKVAYDILG-DKALAITAVSPSLLPEDLEDARIQAAVIGISHE 74 Query: 352 VLPIHDLVNHFFS 364 + +++ N ++ Sbjct: 75 EVKTNEMENKNYT 87 >gi|328715378|ref|XP_003245614.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like isoform 2 [Acyrthosiphon pisum] Length = 713 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%) Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 Q L + Y A + + +E+E C+ +RD V ++ KV++ LSGG+DS +C Sbjct: 221 QMLKSFLYDVAGLAGSYTVKSREQE-----CIKYIRDQVGQS---KVLVLLSGGVDSTVC 272 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 AA+ AL +E V + + + E ALG Sbjct: 273 AALLHRALDREQVIAVHIDNGFMRLGESEQVMKSLNALG 311 >gi|327467228|gb|EGF12732.1| NH(3)-dependent NAD(+) synthetase [Streptococcus sanguinis SK330] Length = 274 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 38/245 (15%) Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT--- 323 P+ + E + V L+ Y++K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 PIIDPEEEIRKSVDFLKAYLRKHPFLKSYVLGISGGQDSTLAGRLAQLAVEEMRAETGDD 74 Query: 324 ------IMLPYKYTSPQSLEDAAACAKALGCKYDV-LPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY Q+ ED A A A + DV L ++ + M++ ++ + Sbjct: 75 GYRFIAVRLPY---GVQADEDDAQKALAF-IQPDVSLTVN--IKESADAMTRAVEATGAK 128 Query: 377 IV---AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 + NI++R R AL+ ++ T + +E + T +GD PL L Sbjct: 129 VSDFNKGNIKARSRMIAQYALAGSYSGAVIGTDHAAENVTAFFTKFGDGGADILPLYRLN 188 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPIL 489 K R + + LG P + EK P+A+L +P D+ +L Y + Sbjct: 189 K---------RQGKRLLAVLGA-----DPVLYEKVPTADLEEEKPGIADEVALGVTYNEI 234 Query: 490 DDIIK 494 DD ++ Sbjct: 235 DDYLE 239 >gi|254167689|ref|ZP_04874540.1| hydrolase, carbon-nitrogen family [Aciduliprofundum boonei T469] gi|289597010|ref|YP_003483706.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Aciduliprofundum boonei T469] gi|197623498|gb|EDY36062.1| hydrolase, carbon-nitrogen family [Aciduliprofundum boonei T469] gi|289534797|gb|ADD09144.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Aciduliprofundum boonei T469] Length = 280 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 9/172 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I Q+N V D+ N KA+ +A + D ++F E+F+ G + K Sbjct: 2 VRICAVQMNVVHNDVPKNHKKAKNYVVQAGDKECDFLVFPEIFLEGVIRDIGSLNKLARP 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLN-SVVILDAGNIIAVRDKINLPNYSE 122 D + G IV+G + +G N SV+I D GNI+ K L Sbjct: 62 IPGEYTDWFTKYAEEYGMHIVMGSIHEKTVDGFYNTSVLIDDKGNIVGKYRKNFL----- 116 Query: 123 FHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFS 173 + + F+ P+ ++GI IC D + + ++GA+ LF Sbjct: 117 WASENKFLKPSKERPVFDTKFGKVGINICWDF-AFPEVANTIARKGAKILFG 167 >gi|196249022|ref|ZP_03147721.1| ExsB family protein [Geobacillus sp. G11MC16] gi|196211251|gb|EDY06011.1| ExsB family protein [Geobacillus sp. G11MC16] Length = 274 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++ SGG+DS A+A +ALG + + + + + + ++ A A+ +G K+ + Sbjct: 22 VLVAFSGGVDSTFLLAMAKEALGDQVLAVTAVSETFPA-REVQHATKLAEQIGVKHIKIQ 80 Query: 355 IHDLVNHFF 363 IH+L N F Sbjct: 81 IHELENEDF 89 >gi|159903575|ref|YP_001550919.1| putative nitrilase [Prochlorococcus marinus str. MIT 9211] gi|159888751|gb|ABX08965.1| Possible nitrilase [Prochlorococcus marinus str. MIT 9211] Length = 274 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 14/166 (8%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 ++ N++ A E A R+G DL+ E F G + L + S + T+ Sbjct: 16 NVEANLSAAEEQIEIAARRGADLVGLPENFAFIGNDEDRLEMASELAEKSSRFLVTMARR 75 Query: 77 THDGGAGIVVGFPRQDQEGVLN-SVVILDAGNIIAVRDKI-----NLPNYSEFHEKRTFI 130 G P +D + LN S ++ G ++ DKI +LP+ +++ E T + Sbjct: 76 YQIVLLGGGYPVPAEDGKRTLNRSELVGRDGQLLGRYDKIHLFDVDLPDGNKYRESETIV 135 Query: 131 SGYSNDPIVFRDI----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 SG ++ D+ R+G+ IC D+ + + +HL GAE L Sbjct: 136 SGNLLPSVI--DVPGLCRVGLSICYDV-RFPELYRHLVDNGAELLM 178 >gi|116249105|ref|YP_764946.1| putative nitrilase/cyanide hydratase family protein [Rhizobium leguminosarum bv. viciae 3841] gi|115253755|emb|CAK12149.1| putative nitrilase/cyanide hydratase family protein [Rhizobium leguminosarum bv. viciae 3841] Length = 583 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 8/150 (5%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 A Q P + + A NI++ EEA G LI+ E+ +GY D K F++ Sbjct: 14 ATIQFEPTMFEKARNISRLTALCEEAAEAGARLIVTPEMGTTGYCWFDRAEVKPFVETIP 73 Query: 68 SA-IDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNYSEFH 124 A D ++ IVVG P D L N+ V++ G ++ K ++ Sbjct: 74 GATTDVFQAIASKHRCYIVVGMPEVDPASDLYYNTAVLIGPGGVVGRHRK----SHPYIA 129 Query: 125 EKRTFISGYSNDPIVFRDI-RLGILICEDI 153 E + +G + +I R+ +L+C D+ Sbjct: 130 EPKWAANGDIVHEVFETEIGRISMLVCMDL 159 >gi|206902001|ref|YP_002251471.1| hypothetical protein DICTH_1659 [Dictyoglomus thermophilum H-6-12] gi|206741104|gb|ACI20162.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12] Length = 268 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 KVI+ SGG+DS IA D LG ENV + L + +E+A AK L ++ + Sbjct: 16 QKVIVAYSGGVDSTFLLKIAKDTLG-ENVLAVTLVSPIFPKKEIEEAKEFAKKLKVQHII 74 Query: 353 LPIHDLVNHFFSLMSQFLQEEP 374 + +L+ +F++ P Sbjct: 75 INNDELLRK-----REFIENPP 91 >gi|227488498|ref|ZP_03918814.1| asparagine synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227543103|ref|ZP_03973152.1| asparagine synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091392|gb|EEI26704.1| asparagine synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181091|gb|EEI62063.1| asparagine synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 614 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIG--LSGGIDSALCAAIAVDALGKENVQTI 324 +P EE+ +++ +L D V+K+ V +G LSGGIDS AA+A N+ T Sbjct: 212 VPAGEEQKLFDSIAKALEDSVEKHMRADVTVGSFLSGGIDSTAIAALA--KRHNPNLLTF 269 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDV 352 ++ ++ AA A+A+G ++ V Sbjct: 270 TTGFEREGYSEVDVAAESAEAIGVEHIV 297 >gi|325267556|ref|ZP_08134208.1| transcription regulator ExsB [Kingella denitrificans ATCC 33394] gi|324980906|gb|EGC16566.1| transcription regulator ExsB [Kingella denitrificans ATCC 33394] Length = 217 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 31/62 (50%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + ++ SGG DS C A+ G ENVQ I Y LE AA+ A+ LG + VL Sbjct: 3 QALVVFSGGQDSTTCLFQAMQQYGAENVQAITFAYGQRHGIELERAASIAQELGIRQTVL 62 Query: 354 PI 355 + Sbjct: 63 DL 64 >gi|302535963|ref|ZP_07288305.1| NAD+ synthetase [Streptomyces sp. C] gi|302444858|gb|EFL16674.1| NAD+ synthetase [Streptomyces sp. C] Length = 273 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 93/240 (38%), Gaps = 32/240 (13%) Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA-------LCAAIAVDALGKENVQT 323 E E + V L + + +++G+SGG+DS L A +A Sbjct: 21 EAEREIERRVAFLTERLTSTGLRSLVLGISGGVDSTTSGRLCQLAVERAREAGHDAQFYA 80 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKY----DVLPIHDLVNHFFSLMS-QFLQEEPSGIV 378 + LPY + + DA + + D+ P D + F V Sbjct: 81 MRLPYGVQADE--HDAQLALSFIQADHVLTVDIKPASDAALDASAAAGVTFRDAHHQDFV 138 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 NI++R R A++ +++ T + +E G+ T +GD + PL L K Sbjct: 139 HGNIKARQRMIAQYAVAGAHAGLVVGTDHAAEAISGFFTKFGDGAADVVPLTGLTK---- 194 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIK 494 R I LG P ++ K+P+A+L P + D+++L Y +DD ++ Sbjct: 195 -----RRVRAIADALGA-----PAELVWKTPTADLETLDPGKADEDALGVTYDDIDDFLE 244 >gi|123501096|ref|XP_001328005.1| NAD+ synthetase family protein [Trichomonas vaginalis G3] gi|121910942|gb|EAY15782.1| NAD+ synthetase family protein [Trichomonas vaginalis G3] Length = 299 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 70/234 (29%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L Y++K+ ++ +SGGIDSA+ TI+L K +L D+ Sbjct: 31 LNQYMRKSGLKATVVNVSGGIDSAV---------------TILLCQK---AATLPDSPI- 71 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP---------------SGIVAENIQ---S 384 K LG + PIH +H S +FL E+ S V + ++ + Sbjct: 72 KKVLGI---IQPIHS-TSHIMSRAEEFLIEKKIEYANVDQSAVYDLLSKTVEDCLKYPNA 127 Query: 385 RIRGNILMALSN----HSKAMLLTTSNKSEISVGYGT------LY-----GDMSGGFNPL 429 + G +L + + A LL+++ I +G G LY GD + + Sbjct: 128 QFAGGMLKSYMRTPVAYYAAQLLSSNGLPAIVIGTGNYDEDGYLYYFCKPGDGTSDVQLI 187 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 DL+K++VF +A + N IL+ PSA+L QTD+ L Sbjct: 188 HDLHKSEVFAVARYLNCTS--------------KILDAPPSADLWDAQTDEGEL 227 >gi|221054802|ref|XP_002258540.1| nad synthase [Plasmodium knowlesi strain H] gi|193808609|emb|CAQ39312.1| nad synthase, putative [Plasmodium knowlesi strain H] Length = 866 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 38/192 (19%) Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPS----- 375 + T+ LP K +S + A ++A+ + V I DL + F S + EE Sbjct: 581 LNTLSLPSKNSSENTRSYAEQLSRAINSYHTVYCIDDLFDFFKSAGKNIIGEEMKFRSQG 640 Query: 376 -----GIVAENIQSRIRGNILMA--------------LSNHSKAML-LTTSNKSEISVGY 415 + +NIQSR R +LMA L+ H++ +L + T N E GY Sbjct: 641 GCNYEDLCLQNIQSRSR--LLMAYFFSPLICHKRYSPLNLHNEFLLTIATGNLDETITGY 698 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV-IPPSILEKSPSAELR 474 T Y SG N + ++ K + + + P+ ++ + S+ + PSAEL+ Sbjct: 699 YTKYDCSSGDINVIGNVSKILIKETMCLLAN-------DPMYDLSVCNSMNQFHPSAELK 751 Query: 475 P---HQTDQESL 483 P QTD++ L Sbjct: 752 PLDNTQTDEDDL 763 >gi|40890311|gb|AAR97500.1| nitrilase [uncultured organism] Length = 333 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 30/178 (16%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------- 52 M +K A Q++PV+ G + + + E +G+ F E I YP Sbjct: 1 MSTIVKAAAVQISPVLYSREGTVERVVKKIRELGEKGVQFATFPETVIPYYPYFSFVQTP 60 Query: 53 ------PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA- 105 PE L + S A D + G + +G +D + N+ ++ DA Sbjct: 61 LQILAGPEHLKLLDQSVTVPSPATDAIGQAARQAGMVVSIGVNERDGGTLYNTQLLFDAD 120 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSN 158 G +I R KI +Y E+ + G D R + R+G L C W+++N Sbjct: 121 GALIQRRRKIKPTHY----ERMIWGEG---DGSGLRAVDSQVGRIGQLAC---WEHNN 168 >gi|225076556|ref|ZP_03719755.1| hypothetical protein NEIFLAOT_01604 [Neisseria flavescens NRL30031/H210] gi|224952056|gb|EEG33265.1| hypothetical protein NEIFLAOT_01604 [Neisseria flavescens NRL30031/H210] Length = 219 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 30/63 (47%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G+ENVQ I Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAIELERARWIAQDLGVKQRV 63 Query: 353 LPI 355 L + Sbjct: 64 LDL 66 >gi|322701223|gb|EFY92973.1| protein amidase [Metarhizium acridum CQMa 102] Length = 960 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 54/260 (20%), Positives = 100/260 (38%), Gaps = 54/260 (20%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA Q P VGD+ N+ +A + + +DL++ EL SGY + L F++ Sbjct: 1 MRIACLQFAPQVGDVDNNLNRADAILSRVDPEALDLLVLPELAFSGYNFKSLGDISQFLE 60 Query: 65 ACSSAIDTLKSDT----HDGGAGIVVGFPRQ--------DQEGVLNSVVILDA-GNIIAV 111 + I +L + T +D ++ G+P + N+ +I++ G +A Sbjct: 61 PSVAGISSLWTRTTALKYD--CTVITGYPEKVDPTFKWPTNPEYYNAAIIVNGEGETVA- 117 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRL------GILICEDI--------WKNS 157 NY + H T + P F RL I IC D+ W Sbjct: 118 -------NYRKTHLYYTDETWALEGPAGFFGERLDGLGRTAIGICMDLNPYKFEAPWDKF 170 Query: 158 NICKHLKKQGAEFL-----FSLNASPYYHNKLKK------------RHEIVTGQISHVHL 200 +H+ GA + + N P +++ + R E + S + Sbjct: 171 EFAQHVLDCGARLVVISMAWITNDDPRQFSRMPQEPDMNTLLYWVSRLEPIIRAESTEEV 230 Query: 201 PIIYVNQVGGQDELIFDGAS 220 +++ N+ G + E+ + G S Sbjct: 231 IVVFANRTGMEGEVTYAGTS 250 >gi|40890087|gb|AAR97388.1| nitrilase [uncultured organism] Length = 335 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 28/172 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 +++A Q++PV+ + + K E +QG+ F E + YP Sbjct: 13 VRVAAVQISPVLYNREATVQKVVNKILELGKQGVQFATFPETIVPYYPYFSFIQAPYAMG 72 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 E L + + S+A D + + + +G +D + N+ ++ DA G +I Sbjct: 73 KEHLRLLEQSVTVPSAATDAISEAAKEANMVVSIGVNERDGGTIYNTQLLFDADGTLIQR 132 Query: 112 RDKINLPNYSEFHEKRTFISG-----YSNDPIVFRDIRLGILICEDIWKNSN 158 R K+ P Y HE+ + G + D V R+G L C W++ N Sbjct: 133 RRKLT-PTY---HERMIWGQGDASGLRATDSAVG---RIGQLAC---WEHYN 174 >gi|167624873|ref|YP_001675167.1| Nitrilase [Shewanella halifaxensis HAW-EB4] gi|167354895|gb|ABZ77508.1| Nitrilase [Shewanella halifaxensis HAW-EB4] Length = 314 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 25/47 (53%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K+AI Q P V D I KA + +G +LI+F E FI GYP Sbjct: 3 KVAIIQEAPCVLDKKATIQKAVEIVHSVSEKGAELIVFPEAFIPGYP 49 >gi|330951498|gb|EGH51758.1| NAD synthetase [Pseudomonas syringae Cit 7] Length = 275 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 29/214 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSP 333 +++ +Q +++G+SGG+DS +A A+ + T + LPY + Sbjct: 35 IKECLQNARLKTLVLGISGGVDSLTAGLLAQRAVKELRESTGDNAYRFIAVRLPYVVQAD 94 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNIL 391 + E A+ + + I V + + F L V N ++R+R Sbjct: 95 EH-EAQASVDFIEPDERHTINIGSSVKALAAEVKAFDGLPATSVDFVLGNTKARMRMVAQ 153 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 ++ +++ T + +E +G+ T +GD + PL L K QV A + Sbjct: 154 YTVAGAYHGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRATARHFGA----- 208 Query: 452 GLGPLTEVIPPSILEKSPSAELR---PHQTDQES 482 P S++EK P+A+L P + D+ S Sbjct: 209 ---------PESLVEKVPTADLEDLSPGKPDEAS 233 >gi|309805848|ref|ZP_07699883.1| NAD+ synthase [Lactobacillus iners LactinV 03V1-b] gi|308167757|gb|EFO69901.1| NAD+ synthase [Lactobacillus iners LactinV 03V1-b] Length = 244 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 55/254 (21%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQT---------IMLPYKYTSPQSLEDAAACAKAL 346 ++G+SGG DS L +A A+ + +T + LPY S A + Sbjct: 11 VLGISGGQDSTLTGKLAQMAISELRAETGDNEYQFIAVRLPYGVQKDASDAADAVAFQHA 70 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQE-EPSGIVAE-----NIQSRIRGNILMALSNHSKA 400 DL+ + S + ++ E SGI NI++R R + A++ +K Sbjct: 71 D--------QDLIVNIKSAVDATVKSLEESGIEISDFNKGNIKARQRMIVQYAIAGANKG 122 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV- 459 ++ T + +E G+ T YGD + P+ L K Q G L E+ Sbjct: 123 AVIGTDHAAENISGFFTKYGDGASDILPIFRLNKRQ---------------GKALLQELN 167 Query: 460 IPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQEYNDETV 515 P + +K+P+A+L RP D+++L Y +DD ++ +E Sbjct: 168 CPKHLYQKAPTADLEEKRPALPDEQALGVSYDKIDDYLE------------GKELAKVDA 215 Query: 516 RYVEHLLYGSEYKR 529 +E+L SE+KR Sbjct: 216 ERIEYLWTRSEHKR 229 >gi|170018042|ref|YP_001728961.1| amidohydrolase [Leuconostoc citreum KM20] gi|169804899|gb|ACA83517.1| Predicted amidohydrolase [Leuconostoc citreum KM20] Length = 263 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 8/223 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV-FKKSF 62 KL +AIAQ++ + N + ++A G+D++++ E++ +GY E LV Sbjct: 2 KLTVAIAQIDIALAQPDINQLTVAQYAQKAGEAGVDVLIYPEMWRTGYALEQLVNLADEE 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS 121 + L H G V +QD N++ + D G+ ++ +K++L + Sbjct: 62 GVKTQDLLSQLARQYHINIIGGSVATRQQD--AFYNTMFVYDKNGHQVSTYNKLHL--FG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 E++ +G + + I IC DI + + E L+ + P Sbjct: 118 LMAEEKFISAGRTTNVFTLAGIPSAGAICYDIRFPEWLRTMMAVGPQEILYIVAEWPI-- 175 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++ + ++ + +I N+VG D+ IF G S D Sbjct: 176 QRIAQWQILLQARAIENQAFVIAANRVGHDDDNIFGGRSLIID 218 >gi|20089138|ref|NP_615213.1| hypothetical protein MA0240 [Methanosarcina acetivorans C2A] gi|19914006|gb|AAM03693.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 281 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 +I SGG+DS+ AA+A + LG E + + Q LE AA A +G ++ +LP Sbjct: 19 AVIAFSGGVDSSTLAALAFEELG-EKALAVTIDSPLFPRQQLETAAQTACEIGIQHKILP 77 Query: 355 IHDLVNHFFS 364 +FS Sbjct: 78 FSLTSVPYFS 87 >gi|268532154|ref|XP_002631205.1| Hypothetical protein CBG03001 [Caenorhabditis briggsae] Length = 741 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 15/146 (10%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ S T ++ E +C+ +R + KV++ +SGG+DSA+CAA+ Sbjct: 239 NFLFPISGCTKSFTIENRE---QSCIKEIRSIIGDK---KVLVMVSGGVDSAVCAALLNR 292 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH--DLVNHFFSLMSQFLQE 372 ALG V + + + + KAL LP+H D F S L E Sbjct: 293 ALGPGRVTAVHIDNGFMRHLESDAVEMSLKALD-----LPVHRYDYGTTFRSSSEHMLPE 347 Query: 373 EPS--GIVAENIQSRIRGNILMALSN 396 E + I ++ +I GN + + + Sbjct: 348 EKALDEIDDPELKRKIIGNTFIRVKD 373 >gi|313246430|emb|CBY35339.1| unnamed protein product [Oikopleura dioica] Length = 572 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 33/148 (22%) Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 C+ +R+ V + K+++ +SGG+DS + AA+ A+GKE V+ + + + Sbjct: 207 CIAEIREQVGETG--KILVLISGGVDSCVLAALCFKAIGKERVKCLHIDNGFMRK----- 259 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI----QSRIRGNILMAL 394 F+++ LQ EPS I+ + + + +I G+ + L Sbjct: 260 ---------------------GFLFNILYDLLQ-EPSQILCKTVDPEQKRKIIGDTFIKL 297 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + L + + ++ + GTL D+ Sbjct: 298 VKIEASRLNMSIDNKDVFLAQGTLRPDL 325 >gi|300726688|ref|ZP_07060122.1| hydrolase YafV [Prevotella bryantii B14] gi|299776058|gb|EFI72634.1| hydrolase YafV [Prevotella bryantii B14] Length = 252 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/244 (18%), Positives = 94/244 (38%), Gaps = 21/244 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAI Q + + GDI N A +A + + G +L + E+F +G+ + K Sbjct: 1 MKIAILQQDIIWGDIQANCEAAAKAIDA--QPGNNLYILPEMFSTGFATQ----PKGIAD 54 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A ++ +K + A I +D N + + + DK +L Y H Sbjct: 55 ADGYTLNWMKQKAREKHAAICGSVAIEDHVRYYNRLYFVKPDGSVEYYDKHHLFTYGGEH 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICED----IWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F +G + + R+ + +C D +W +N ++ ++ + + Sbjct: 115 YQ--FTAGKDRVIVNYEGYRILLAVCYDLRFPVWSRNN---------QDYDLAIYVASWP 163 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 + ++ + ++ VN+VG L + G S D ++ + EQ Sbjct: 164 AKRQLAWDTLLRARAIENQCYLVGVNRVGDDPALHYSGGSVILDPNGEILAACESEKEQV 223 Query: 241 FMTE 244 + E Sbjct: 224 AVAE 227 >gi|262306027|gb|ACY45606.1| gln amidotransferase [Craterostigmus tasmanianus] Length = 197 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 23/180 (12%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D S L+ E C+ +RD V N KV++ +SGG+DS +CAA+ Sbjct: 12 NFIVDVSGCNAAYTLKSRE---TMCLEYIRDIVGDN---KVLMLVSGGVDSTVCAALLHK 65 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF----- 369 AL K+ V + + + + LG K L I + FF+ ++ Sbjct: 66 ALKKDQVIALHIDNGFMRKSETLQVKESLEKLGLK---LKIVRASHTFFNAVTSVPIDPK 122 Query: 370 ---LQEEPSGIVAENI----QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + I+ I + +I G+ + ++N A L S E+ +G GTL D+ Sbjct: 123 DPNSRKRLTDILCRTILPEDKRKIIGDTFIKVANEVIAELNLRSE--EVFLGQGTLRPDL 180 >gi|288932132|ref|YP_003436192.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ferroglobus placidus DSM 10642] gi|288894380|gb|ADC65917.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ferroglobus placidus DSM 10642] Length = 263 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 11/148 (7%) Query: 26 ARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIV 85 A + E+ +G+++ L E F Y D + S ++ L+ + + A + Sbjct: 19 AEKLIEKGLNEGVEIFLLPEYF--SYKVGDTSLETS-----KKTLEWLREKSEEYQAVLA 71 Query: 86 VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRL 145 R+D++G N++ + + G ++A +DK++ P SE + G + + ++ Sbjct: 72 GNVIRKDEDGYYNTIYVFEKGELVATQDKLH-PTRSE--RELGIRCGRKLEIFEIKGVKF 128 Query: 146 GILICEDIWKNSNICKHLKKQGAEFLFS 173 LIC DI +C+ +GAE + + Sbjct: 129 AALICADIL-YPELCRVAALKGAEIVLN 155 >gi|40890123|gb|AAR97406.1| nitrilase [uncultured organism] Length = 330 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 16/136 (11%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 +K +K A Q +PV+ +AK R E ++G+ F E + YP Sbjct: 1 MKVVKAAAVQFSPVLYSREATVAKVVRKIHELGQKGVQFATFPETVVPYYPYFAAVQTGI 60 Query: 53 -----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-G 106 E L + + S+A D + G + +G +D + N+ ++ DA G Sbjct: 61 ELLSGTEHLRLLEQAVTVPSAATDAIGEAARQAGMVVSIGVNERDGGTLYNTQLLFDADG 120 Query: 107 NIIAVRDKINLPNYSE 122 +I R KI P + E Sbjct: 121 TLIQRRRKIT-PTHFE 135 >gi|330888415|gb|EGH21076.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. mori str. 301020] Length = 221 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 10/202 (4%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ GDI N+A + A G +LF EL ++GY P+ + + + A Sbjct: 6 LAVAQFCSARGDIEQNLAGHLAFMQRAADLGASYLLFPELSLTGYEPD--LARALALHAD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD-KINLPNYSEFHE 125 + ++ +K+ +G P + N +++ A A D I Y E Sbjct: 64 DARLEPIKALAMKLRLVTTIGVPLKGA----NDSILIGALTFTADGDVTIYAKQYLHPGE 119 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 + F +G + + ++G+ +C D + +++ + + S+ SP Sbjct: 120 DKVFSAGDKDCYLPIDQQQIGLCVCADFTQPAHVQRMAAGGAWVYAASVLISP---GGYA 176 Query: 186 KRHEIVTGQISHVHLPIIYVNQ 207 + E++ G +LP++ N Sbjct: 177 QDAEMLAGHARRHNLPMLVANH 198 >gi|309364979|emb|CAP23621.2| hypothetical protein CBG_03001 [Caenorhabditis briggsae AF16] Length = 808 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 15/146 (10%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ S T ++ E +C+ +R + KV++ +SGG+DSA+CAA+ Sbjct: 306 NFLFPISGCTKSFTIENRE---QSCIKEIRSIIGDK---KVLVMVSGGVDSAVCAALLNR 359 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH--DLVNHFFSLMSQFLQE 372 ALG V + + + + KAL LP+H D F S L E Sbjct: 360 ALGPGRVTAVHIDNGFMRHLESDAVEMSLKALD-----LPVHRYDYGTTFRSSSEHMLPE 414 Query: 373 EPS--GIVAENIQSRIRGNILMALSN 396 E + I ++ +I GN + + + Sbjct: 415 EKALDEIDDPELKRKIIGNTFIRVKD 440 >gi|313895400|ref|ZP_07828957.1| hydrolase, carbon-nitrogen family [Selenomonas sp. oral taxon 137 str. F0430] gi|312976295|gb|EFR41753.1| hydrolase, carbon-nitrogen family [Selenomonas sp. oral taxon 137 str. F0430] Length = 308 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 29/47 (61%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 ++ + Q PV+ D A ++ KA E+A + +LI+F ELF+ GYP Sbjct: 9 RLGLIQAAPVMFDKAASLKKALEWIEKAAEKDAELIVFPELFLPGYP 55 >gi|300866011|ref|ZP_07110745.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336002|emb|CBN55903.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 271 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + + +I SGGIDS L A IA D LG + + P+ LEDA A ++G Sbjct: 14 SQMDRALIAYSGGIDSTLVAKIAFDMLGNRALAVTAVSPSLL-PEDLEDARIQALSIGIA 72 Query: 350 YDVLPIHDLVNHFFS 364 ++ + ++ N ++ Sbjct: 73 HEEVQTQEMANPNYT 87 >gi|257065853|ref|YP_003152109.1| GMP synthase, large subunit [Anaerococcus prevotii DSM 20548] gi|256797733|gb|ACV28388.1| GMP synthase, large subunit [Anaerococcus prevotii DSM 20548] Length = 510 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 17/158 (10%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K+I GLSGG+DS++ A I A+G +N+Q I + + + K LG + Sbjct: 216 EKMICGLSGGVDSSVAATIVSKAIG-DNLQCIFVDHGLLRKDEAKSVMETYKDLGLNVKM 274 Query: 353 LPIHDLVNHFFSLMSQFLQ-EEPSGIVA-------ENIQSRIRGNILMALSNHSKAMLLT 404 + D F SL+ + EE I+ E +I G + ++ + Sbjct: 275 V---DKSEEFLSLLKGVEEPEEKRKIIGNHFVEVFEEEAKKIGGAKYLVQGTIYPDVIES 331 Query: 405 TSNKSEISVGYGTLYG-----DMSGGFNPLKDLYKTQV 437 +K+ + + + G D G PL++L+K +V Sbjct: 332 GKDKASVIKSHHNVGGLPEDMDFVGLVEPLRELFKDEV 369 >gi|194378708|dbj|BAG63519.1| unnamed protein product [Homo sapiens] Length = 594 Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 106 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 159 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + K LG + V+ Sbjct: 160 ALDQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 198 >gi|317131257|ref|YP_004090571.1| asparagine synthase [Ethanoligenens harbinense YUAN-3] gi|315469236|gb|ADU25840.1| asparagine synthase [Ethanoligenens harbinense YUAN-3] Length = 272 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V + SGG+DS+ A DALG +V + + L +A A AKA G +++V+ Sbjct: 22 VAVAFSGGVDSSFLLRSACDALGVSHVLAVTARSATYPERELREAVALAKAFGVQHEVIR 81 Query: 355 IHDL 358 +L Sbjct: 82 SEEL 85 >gi|257387062|ref|YP_003176835.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase [Halomicrobium mukohataei DSM 12286] gi|257169369|gb|ACV47128.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase [Halomicrobium mukohataei DSM 12286] Length = 289 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS-LEDAAACAKALGCKYDVL 353 V+I SGG+DS++ AA+A DALG + V T P++ L DA A +G +++++ Sbjct: 21 VLIAFSGGVDSSVVAALAHDALGDDAVACTA--KSETLPEAELVDANRVADEIGIRHEIV 78 Query: 354 PIHDLVNHFF 363 +L + F Sbjct: 79 EFSELDSEAF 88 >gi|40890223|gb|AAR97456.1| nitrilase [uncultured organism] Length = 336 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 22/169 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 +K A Q+ P G + K +EA +G+ +I+F E FI YP Sbjct: 7 IKAAAVQITPDFESHDGTVKKVCNVIDEAGAKGVQIIVFPETFIPYYPYFSFITPPVTAG 66 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 E L + + + +V+G +D + N+ +I DA G ++ Sbjct: 67 AEHLRLYEKSVVIPGPVTQAISERARMNNMVVVLGVNERDNGSLYNTQIIFDATGEMLLK 126 Query: 112 RDKINLPNYSEFHEKRTFISG-YSNDPIVFRDI-RLGILICEDIWKNSN 158 R KI P Y HE+ + G S +V I R+G L C W++ N Sbjct: 127 RRKIT-PTY---HERMIWGQGDASGLKVVDTAIGRVGALAC---WEHYN 168 >gi|237669033|ref|ZP_04529017.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium butyricum E4 str. BoNT E BL5262] gi|237657381|gb|EEP54937.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 301 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 25/194 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +++ N V GD N+ + E A R+G ++F E+ ++GY E KK +Q Sbjct: 6 INLSLVTFNAVWGDKEKNLNRILGYIECAARKGSHFVVFPEMSLTGYGDEGEKEKKDKMQ 65 Query: 65 ACSSAIDTLKSDTHDGGAG--------IVVGFPRQDQEG---VLNSVVILDAGNIIAVRD 113 S +T+ + D A +V G P +D + + N++ I ++ Sbjct: 66 --SLLAETIPGPSTDKVAEACKKYDIYVVFGMPERDSDDSSIIYNALAIFSPEGLVGSYR 123 Query: 114 KINL----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K++L PN++ +K FI PI G IC D + + ++ +G Sbjct: 124 KMHLPAPEPNWATRGDK-PFILETPWGPI-------GYAICYDSYCFPELMRYYASKGCR 175 Query: 170 FLFSLNASPYYHNK 183 + A H K Sbjct: 176 LYINSTALAKCHGK 189 >gi|182417671|ref|ZP_02948990.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium butyricum 5521] gi|182378395|gb|EDT75926.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium butyricum 5521] Length = 286 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 25/194 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +++ N V GD N+ + E A R+G ++F E+ ++GY E KK +Q Sbjct: 6 INLSLVTFNAVWGDKEKNLNRILGYIECAARKGSHFVVFPEMSLTGYGDEGEKEKKDKMQ 65 Query: 65 ACSSAIDTLKSDTHDGGAG--------IVVGFPRQDQEG---VLNSVVILDAGNIIAVRD 113 S +T+ + D A +V G P +D + + N++ I ++ Sbjct: 66 --SLLAETIPGPSTDKVAEACKKYDIYVVFGMPERDSDDSSIIYNALAIFSPEGLVGSYR 123 Query: 114 KINL----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K++L PN++ +K FI PI G IC D + + ++ +G Sbjct: 124 KMHLPAPEPNWATRGDK-PFILETPWGPI-------GYAICYDSYCFPELMRYYASKGCR 175 Query: 170 FLFSLNASPYYHNK 183 + A H K Sbjct: 176 LYINSTALAKCHGK 189 >gi|157962682|ref|YP_001502716.1| Nitrilase [Shewanella pealeana ATCC 700345] gi|157847682|gb|ABV88181.1| Nitrilase [Shewanella pealeana ATCC 700345] Length = 314 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 25/47 (53%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K+AI Q P V D I KA + +G +LI+F E FI GYP Sbjct: 3 KVAIIQEAPCVLDKKATIQKAVEIVHSVSEKGAELIVFPEAFIPGYP 49 >gi|270156847|ref|ZP_06185504.1| NAD+ synthetase domain-containing protein [Legionella longbeachae D-4968] gi|289164712|ref|YP_003454850.1| NAD+ synthase, similar to eukaryotic protein [Legionella longbeachae NSW150] gi|269988872|gb|EEZ95126.1| NAD+ synthetase domain-containing protein [Legionella longbeachae D-4968] gi|288857885|emb|CBJ11737.1| putative NAD+ synthase, similar to eukaryotic protein [Legionella longbeachae NSW150] Length = 1114 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 34/219 (15%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLE 337 L Y +K ++G+SGGIDSA+ AI + K + + + LP+ + + Sbjct: 40 LSRYFEKTKLRAAVLGVSGGIDSAVTLAILNEFYKKKRSFLKKLVPVCLPFFNCQGATGQ 99 Query: 338 DAAACA-----KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 A A K L + L + + +++ + + + S +R +L Sbjct: 100 INAVSAAEQIIKFLNLESTTLDLSHSHGFLYEQIAKGFNFKKTAWSQGQLVSNLRTPVLY 159 Query: 393 ALSNH-----SKAMLLTTSNKSEISVGYGTLYGDMSGGF---NPLKDLYKTQVFQLASWR 444 ++NH + T N+ E S Y +G S + DL+K++V +LAS+ Sbjct: 160 QIANHLSEGGEPCAVFGTINRDEGS--YAGFFGKASDAMVDIQLISDLHKSEVKKLASFL 217 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 N IP +++ P+ TD+ S Sbjct: 218 N--------------IPQDLIDAQPTGNTYDGNTDELSF 242 >gi|254473777|ref|ZP_05087172.1| nitrilase [Pseudovibrio sp. JE062] gi|211957163|gb|EEA92368.1| nitrilase [Pseudovibrio sp. JE062] Length = 332 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 27/49 (55%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K+K+A+AQ+ PV + K A E A +QG ++ F E + GYP Sbjct: 18 KIKVALAQIAPVWLKREATLQKVADAVELAGKQGCQIVTFGEALVPGYP 66 >gi|160880235|ref|YP_001559203.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium phytofermentans ISDg] gi|160428901|gb|ABX42464.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium phytofermentans ISDg] Length = 318 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 61/282 (21%), Positives = 110/282 (39%), Gaps = 42/282 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--------- 51 M + ++A+ Q N N + + A + G DL+LF E ++ GY Sbjct: 5 MENQFRVAVIQANYPSSKCEINTKVGLQYIKNAKKMGADLVLFPECWLHGYQFPIIKDCL 64 Query: 52 -------------PPEDLVFKKSFIQACSSAID-------TLKSDTHDGGAGIVVGFPRQ 91 E + KKS+ + + A+D S + GIV+ + Sbjct: 65 SISDMYEMDQCDETMECIKQKKSYQEWVNQAVDEESDYVKQFCSVAKELHIGIVLTAYTK 124 Query: 92 DQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILIC 150 + NS +++D GNII K++ +F + SG F I+LG++IC Sbjct: 125 GIQKPRNSAMVIDKNGNIIMTYSKVHT---CDFSLESLVESGEEFKVCDFHGIKLGVMIC 181 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQV-- 208 D + + L +GAE + N+ +K R + ++ + ++ N Sbjct: 182 YDR-EYPESARMLMLKGAEIIVVPNSC----GGMKPRVQALSTRAYENMTGVVMANTAFE 236 Query: 209 GGQDELIFDGASFCFDGQQQ--LAFQMKHFSEQNFMTEWHYD 248 G + F ++ DG++Q F SE+ +M E+ D Sbjct: 237 NGGNSCAFQPIAWDKDGKEQEMALFVADATSEKIYMAEFDMD 278 >gi|308510318|ref|XP_003117342.1| hypothetical protein CRE_01794 [Caenorhabditis remanei] gi|308242256|gb|EFO86208.1| hypothetical protein CRE_01794 [Caenorhabditis remanei] Length = 707 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 8/79 (10%) Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 AC+ +++ V KV++ +SGG+DSA+CAA+ ALG V I + + E Sbjct: 223 ACIDEIKNIVGDK---KVLVMVSGGVDSAVCAALLSRALGPNRVTAIHIDNGFMRH---E 276 Query: 338 DAAACAKALGCKYDVLPIH 356 ++ A K+L LP+H Sbjct: 277 ESDAVEKSLAALN--LPVH 293 >gi|40890273|gb|AAR97481.1| nitrilase [uncultured organism] Length = 321 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--------E 54 + K+A Q PV D I KA A +G L++F E FI YP E Sbjct: 8 QTFKVAAVQATPVFLDREATIDKACELIAAAGNEGARLVVFPEAFIPSYPDWVWAIPPGE 67 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHD--------GGAGIVVGFPRQDQEG----VLNSVVI 102 + V + + + S+++ T+ SD D A +V+G ++ E + N+++ Sbjct: 68 EGVLNELYAELLSNSV-TIPSDVTDRLCRAARLANAYVVMGMSERNAEASGASLYNTLLY 126 Query: 103 LDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKN 156 +DA I + + +P E+ + G + V+ +LG LIC W+N Sbjct: 127 IDAQGEILGKHRKLVPTGG---ERLVWAQGDGSTLQVYDTPLGKLGGLIC---WEN 176 >gi|40890245|gb|AAR97467.1| nitrilase [uncultured organism] Length = 309 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 34/182 (18%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY--------- 51 M + +AI Q PV D+ + KA + +A QG LI+F E + GY Sbjct: 1 MSSTVTVAIIQAAPVYYDLPATLDKAAKLVADAAAQGATLIVFGETWFPGYPAWLDYCPN 60 Query: 52 ------PPEDLVFK---KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-----VL 97 PP VF+ ++ I S +D L + +V+ + ++G + Sbjct: 61 VALWNHPPTKQVFERLHRNSIAVPSKELDFLGALARKHQVVLVLSINERVEQGAGHGTLY 120 Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICED 152 N+++ +DA +A + +P Y+E + G D + + + R+G LIC + Sbjct: 121 NTLLTIDADGTLANHHRKLMPTYTE-----RMVWGM-GDGVGLQAVDTAVGRVGGLICWE 174 Query: 153 IW 154 W Sbjct: 175 HW 176 >gi|297815546|ref|XP_002875656.1| nitrilase 2 [Arabidopsis lyrata subsp. lyrata] gi|297321494|gb|EFH51915.1| nitrilase 2 [Arabidopsis lyrata subsp. lyrata] Length = 340 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 26/48 (54%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 ++ I Q + V D +AKA++ EA G L++F E FI GYP Sbjct: 19 VRATIVQASTVYNDTPATLAKAKKYIVEAANNGSKLVVFPEAFIGGYP 66 >gi|308186574|ref|YP_003930705.1| Aliphatic amidase [Pantoea vagans C9-1] gi|308057084|gb|ADO09256.1| Aliphatic amidase [Pantoea vagans C9-1] Length = 568 Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 16/154 (10%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K +IA+AQ P D+ N+A+ R E+A G +L++ E ++G Sbjct: 282 KASRIAVAQFRPQ-NDVNANLAQIRHQAEQAKAGGAELLVLPERALTGSDGSRFALTLD- 339 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + + TL + + ++ GF ++ E NS V++ + + A +I++ + Sbjct: 340 ----DTPVQTLIALAMELDIALLAGFAEREGEQYFNSAVLVSSSGLSAHYRQIHVSD--- 392 Query: 123 FHEKRTFISGYSNDPIVFRDI---RLGILICEDI 153 + R + S + + V D+ R+GIL+ ED+ Sbjct: 393 --QDRQWAS--AGNQWVTCDLPCGRVGILLGEDL 422 >gi|219871540|ref|YP_002475915.1| queuosine biosynthesis protein QueC [Haemophilus parasuis SH0165] gi|254764350|sp|B8F6L5|QUEC_HAEPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|219691744|gb|ACL32967.1| queuosine biosynthesis protein QueC [Haemophilus parasuis SH0165] Length = 219 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 28/56 (50%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 K ++ SGG DS C +A+ GKENV+ + Y L+ A A+ LG K Sbjct: 6 KAVVIFSGGQDSTTCLFLAIKEFGKENVEVVTFQYGQRHAIELDKARWIAQDLGVK 61 >gi|331014631|gb|EGH94687.1| NAD synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 231 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 29/202 (14%) Query: 295 VIIGLSGGIDS---ALCAAIAVDALGKENVQT------IMLPYKYTSPQSLEDAAACAKA 345 +++G+SGG+DS L A AV L + T + LPY + + E A+ Sbjct: 3 LVLGISGGVDSLTAGLLAQRAVKELRESTGDTRYRFIAVRLPYVVQADEH-EAQASVDFI 61 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + + I V + + F L V N ++R+R ++ + +++ Sbjct: 62 EPDERHTINIGSSVKALAAEVKAFDGLPASSVDFVLGNTKARMRMVAQYTVAGAYQGLVI 121 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T + +E +G+ T +GD + PL L K QV +A + P S Sbjct: 122 GTDHAAEAVMGFFTKFGDGACDLAPLSGLVKNQVRAIARHFGA--------------PES 167 Query: 464 ILEKSPSAELR---PHQTDQES 482 ++EK P+A+L P + D+ S Sbjct: 168 LVEKVPTADLEDLSPGKPDEAS 189 >gi|156034561|ref|XP_001585699.1| hypothetical protein SS1G_13215 [Sclerotinia sclerotiorum 1980] gi|154698619|gb|EDN98357.1| hypothetical protein SS1G_13215 [Sclerotinia sclerotiorum 1980 UF-70] Length = 295 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA Q P VGD+ N KA +A+ + +DL++ E+ SGY L +++ Sbjct: 1 MRIACLQFAPQVGDVDNNFKKADAILSKADPEDIDLLVLPEMAFSGYNFTSLGHITPYLE 60 Query: 65 ACSSAIDTLKSDT----HDGGAGIVVGFPRQ 91 +S + + + T H+ + VG+P + Sbjct: 61 PSTSGVTSAWARTIALKHN--CIVTVGYPEK 89 >gi|331019504|gb|EGH99560.1| hydrolase, carbon-nitrogen family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 249 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 20/209 (9%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI--Q 64 +A AQ + G + N+A + A G D +LF EL ++GY P DL + + Sbjct: 6 LAAAQFCSIRGQLKHNLAGHLAFMQRAADLGADYLLFPELSLTGYEP-DLAHELALSPND 64 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNYSE 122 AC I L V P + G + ++ G++IA + P Sbjct: 65 ACLEPIRALAMHLQ---LMTTVVVPLKGPGGSIEVGALTFTAHGDVIAYAKQYLHPG--- 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP--YY 180 E F G + + R+G+ +C D ++ + + + S+ SP Y Sbjct: 119 --EDAVFSPGSEDCYLQLNQHRIGLCVCADFSHPEHVQRLSEGGSGVYAASVLISPGGYA 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 H+ E++ G LP++ N G Sbjct: 177 HDS-----ELLAGHARRHRLPVLIANHGG 200 >gi|156741610|ref|YP_001431739.1| PP-loop domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156232938|gb|ABU57721.1| PP-loop domain protein [Roseiflexus castenholzii DSM 13941] Length = 278 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 +I SGG+DS L +A D LG+ + Y + LE A A A +GC++ V+ Sbjct: 22 ALIAFSGGVDSTLLLKVAHDTLGERAIAATADSETYPR-EELEQARALATLIGCRHIVVC 80 Query: 355 IHDLVNHFFS 364 ++L + ++ Sbjct: 81 TNELSDEHYA 90 >gi|297585132|ref|YP_003700912.1| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase [Bacillus selenitireducens MLS10] gi|297143589|gb|ADI00347.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Bacillus selenitireducens MLS10] Length = 264 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 6/130 (4%) Query: 28 RAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD-THDGGAGIVV 86 + R E Q DL++ EL Y + F + S I + S+ + G IV Sbjct: 27 KLRNELKGQDGDLVVLPELSAMTYSRDCFDKLHEFAEDESGPIFSKFSELARELGMWIVY 86 Query: 87 GFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVF--RDI 143 G + G ++ VI G++ DKI++ + E+ F G +P+ F +DI Sbjct: 87 GHASIQESGYAISQYVIRSDGDLEGRYDKIHIAQFDSSFEREYFEEG--REPLSFQVKDI 144 Query: 144 RLGILICEDI 153 ++G++IC DI Sbjct: 145 KIGLMICYDI 154 >gi|262306017|gb|ACY45601.1| gln amidotransferase [Semibalanus balanoides] Length = 197 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ + + T L+ EA+ C+ +R V HKV++ +SGG+DS +CAA+ Sbjct: 12 NFLFNVAGVTGSFTLRSREAE---CLEQIRTTV---GTHKVLLLVSGGVDSTVCAALLHK 65 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL-PIHDLVN 360 AL ++ V + + + + +G K V+ H+ +N Sbjct: 66 ALSQDQVIAVHIDNGFMRKHESLQVEQSLRKIGLKLRVINARHNFLN 112 >gi|119717861|ref|YP_924826.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nocardioides sp. JS614] gi|119538522|gb|ABL83139.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Nocardioides sp. JS614] Length = 262 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 14/224 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A Q V GD+ N+ A R A Q + +++ E F++GY + F Sbjct: 1 MRVAAGQAVSVSGDLDANVRTAARLTRLAATQDVRVLVLPEAFLTGY--DVAAFDGPLPD 58 Query: 65 A---CSSAIDTLKSDTHDGGAGIVVGFP-RQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 A +D L++++ G +VVG R+ E L+ +V+ G A DK +L Sbjct: 59 AEGLDGGWLDPLRAESA-AGVTVVVGTALRRGAERRLSQIVVRPDGRADAPYDKQHLDGL 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 EK F G I + LG+ IC D + + + GA + L+++ Y+ Sbjct: 118 ----EKTFFTVGDHGTSIEVDGLELGLSICYDGCFPEH-AQAAARDGA--VGYLSSAAYF 170 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 +R + + +++ G F G S +D Sbjct: 171 PGGAHRRDLYYAARAVENGMYVVFSGLTGRCGGFEFIGGSAVYD 214 >gi|295113599|emb|CBL32236.1| NH(3)-dependent NAD(+) synthetase [Enterococcus sp. 7L76] Length = 275 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT-- 323 +P + + + + L+ Y+ K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 LPTIDPKEEVRKSIDFLKAYLTKHPFLKTFVLGISGGQDSTLAGRLAQLAMTEMREETGD 74 Query: 324 -------IMLPYKYTSPQSLEDA--AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 I LPY + ++ A A + + D+ P D + SL + +Q Sbjct: 75 MSYQFIAIRLPYGEQADEADAQAALAFIQPDVSLRVDIKPAVDAM--VGSLENAGVQ--I 130 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 S N+++R R A++ + ++ T + +E + T YGD PL L K Sbjct: 131 SDFNKGNMKARQRMITQYAVAGENDGAVIGTDHAAENVTAFFTKYGDGGADILPLFRLNK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P ++ K P+A+L +P D+ +L Y +D Sbjct: 191 ---------RQGKALLKELGA-----PEALYLKIPTADLEDDKPLVADEVALGVTYDAID 236 Query: 491 DII--KRIVENEESFINN 506 D + K++ E ++ I N Sbjct: 237 DYLEGKKVSETDQQTIEN 254 >gi|40890061|gb|AAR97375.1| nitrilase [uncultured organism] Length = 314 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 KIA+ Q V+ D G++A+A +EA G L++F E +I GYP D +++ Sbjct: 5 KIAVVQAPSVLLDREGSVARAVTLLDEAAAAGARLVVFPEAYIPGYP--DWIWR 56 >gi|226362738|ref|YP_002780516.1| hydrolase [Rhodococcus opacus B4] gi|226241223|dbj|BAH51571.1| putative hydrolase [Rhodococcus opacus B4] Length = 266 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 32/247 (12%) Query: 40 LILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD-THDGGAGIVVGFPRQDQEGVLN 98 +++ E+ +GY LV +++ +A I ++ + G +V G+P V N Sbjct: 36 ILVCPEMSATGYNIGALVAERA--EAADGPIAARIAEIARESGITVVYGYPEAAGGAVYN 93 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFH-----EKRTFISGYSNDPIVFR----DIRLGILI 149 SV ++D+ ++ NY + H ++ F +G D +V + IR G+LI Sbjct: 94 SVQVVDSSG-------TSVANYRKTHLFGELDRTHFAAG---DELVVQFDHDGIRCGLLI 143 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNA--SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQ 207 C D+ + H + G ++L SPY +V + L + YVN+ Sbjct: 144 CYDVEFPEAVRAHADR-GTQWLVVPTGLMSPYEFIA----ESVVPTRAYESQLFVTYVNR 198 Query: 208 VGGQDELIFDGASFCF--DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTM 265 G + +L + G+S DG +LA +H E + + N DD + Sbjct: 199 CGTEADLDYCGSSCAIAPDG-TELARAGRHEELAIVDLELAALHRSRRENTHLDDRRVDL 257 Query: 266 YIPLQEE 272 Y LQE+ Sbjct: 258 YPFLQEK 264 >gi|107021816|ref|YP_620143.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia AU 1054] gi|116688763|ref|YP_834386.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia HI2424] gi|105892005|gb|ABF75170.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia AU 1054] gi|116646852|gb|ABK07493.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia HI2424] Length = 275 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 24/152 (15%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPED-LVFKKSFIQACSSAIDTLKS 75 D+ N+A+ARR EA +G L+L E F G+ D L + + I + Sbjct: 23 DVTRNLAEARRLIAEAADEGAQLVLLPEYFCFMGHRDTDKLALAEPYR---DGPIQQFLA 79 Query: 76 DTHDGGAGIVVG------FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE----FH 124 D V+G P D+ VLN+ ++ D +GN A DKI+L N+ + F Sbjct: 80 DAARRHGIWVIGGTLPLKAPEPDR--VLNTTLVFDPSGNEAARYDKIHLFNFEKGDESFD 137 Query: 125 EKRTFISGYSNDPIVFRDI---RLGILICEDI 153 E RT +G D +V D ++G+ +C D+ Sbjct: 138 EARTIRAG---DTVVAFDAPFGQVGLSVCYDL 166 >gi|300855967|ref|YP_003780951.1| putative carbon-nitrogen family hydrolase [Clostridium ljungdahlii DSM 13528] gi|300436082|gb|ADK15849.1| predicted hydrolase, carbon-nitrogen family [Clostridium ljungdahlii DSM 13528] Length = 273 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 18/181 (9%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K + + + Q+N +G++ N+ KA ++A+ + D++ ELF +GY + L + Sbjct: 1 MSKIVNVGLVQMNSKLGNVEENVKKAVNFIKQASYKKADIVCLPELFATGYNLDILKNQT 60 Query: 61 SFIQACSSAIDTLKSDTHDGGA--GIVVGFPRQDQEGV----LNSVVIL-DAGNIIAVRD 113 + + + D + + + + V P + G+ NS V+ D GN++ Sbjct: 61 NILG--ENYYDFIVKNISEAAKKYKVFVIAPFAEVRGIKGVLYNSAVLFDDEGNVLGSYA 118 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSNICKHLKKQGAEFL 171 K +L + + ++ +D VF ++GI+IC D C+ L +GA+ + Sbjct: 119 KTHLCGSEKLYYRK------GSDYKVFNTKLGKIGIIICYDA-GFPEACRILALEGADMI 171 Query: 172 F 172 F Sbjct: 172 F 172 >gi|104783605|ref|YP_610103.1| carbon-nitrogen hydrolase [Pseudomonas entomophila L48] gi|95112592|emb|CAK17320.1| putative carbon-nitrogen hydrolase [Pseudomonas entomophila L48] Length = 257 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 10/139 (7%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSA-IDTLKS 75 GDI N+A +A+ QG+DL+LF EL ++GY P Q + + L+ Sbjct: 16 GDIPANLALHLAFMRQAHEQGVDLLLFPELSLTGYAP---AVSSGLAQDLDTPLLAPLRQ 72 Query: 76 DTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY 133 G VVG P + Q+ + IL IA K +L E F +G Sbjct: 73 LAQAAGMTTVVGMPLRVPGQDKPRIAACILHPDGSIAAYTKQHL----HTGEDMFFSAGS 128 Query: 134 SNDPIVFRDIRLGILICED 152 + + + + + +C D Sbjct: 129 GGELLSVAGLSVALSVCAD 147 >gi|29377110|ref|NP_816264.1| NAD synthetase [Enterococcus faecalis V583] gi|227554119|ref|ZP_03984166.1| NAD synthetase [Enterococcus faecalis HH22] gi|229545008|ref|ZP_04433733.1| NAD synthetase [Enterococcus faecalis TX1322] gi|229549252|ref|ZP_04437977.1| NAD synthetase [Enterococcus faecalis ATCC 29200] gi|255971966|ref|ZP_05422552.1| NAD(+) synthase [Enterococcus faecalis T1] gi|256616864|ref|ZP_05473710.1| NAD+ synthase [Enterococcus faecalis ATCC 4200] gi|256763260|ref|ZP_05503840.1| NAD+ synthase [Enterococcus faecalis T3] gi|256853933|ref|ZP_05559298.1| NH(3)-dependent NAD+ synthetase [Enterococcus faecalis T8] gi|256957861|ref|ZP_05562032.1| NAD+ synthase [Enterococcus faecalis DS5] gi|256961140|ref|ZP_05565311.1| NAD+ synthase [Enterococcus faecalis Merz96] gi|256963741|ref|ZP_05567912.1| NAD+ synthase [Enterococcus faecalis HIP11704] gi|257081855|ref|ZP_05576216.1| NAD+ synthase [Enterococcus faecalis E1Sol] gi|257084397|ref|ZP_05578758.1| NAD+ synthase [Enterococcus faecalis Fly1] gi|257087604|ref|ZP_05581965.1| NAD+ synthase [Enterococcus faecalis D6] gi|257090763|ref|ZP_05585124.1| NAD+ synthase [Enterococcus faecalis CH188] gi|257420027|ref|ZP_05597021.1| NAD+ synthase [Enterococcus faecalis T11] gi|293384086|ref|ZP_06629980.1| NAD+ synthetase [Enterococcus faecalis R712] gi|293386900|ref|ZP_06631470.1| NAD+ synthetase [Enterococcus faecalis S613] gi|294781378|ref|ZP_06746720.1| NAD+ synthetase [Enterococcus faecalis PC1.1] gi|300860162|ref|ZP_07106249.1| NAD+ synthase [Enterococcus faecalis TUSoD Ef11] gi|307270662|ref|ZP_07551953.1| NAD+ synthetase [Enterococcus faecalis TX4248] gi|307271688|ref|ZP_07552959.1| NAD+ synthetase [Enterococcus faecalis TX0855] gi|307276870|ref|ZP_07557981.1| NAD+ synthetase [Enterococcus faecalis TX2134] gi|307290364|ref|ZP_07570279.1| NAD+ synthetase [Enterococcus faecalis TX0411] gi|312899996|ref|ZP_07759314.1| NAD+ synthetase [Enterococcus faecalis TX0470] gi|312902393|ref|ZP_07761599.1| NAD+ synthetase [Enterococcus faecalis TX0635] gi|312907963|ref|ZP_07766946.1| NAD+ synthetase [Enterococcus faecalis DAPTO 512] gi|312953653|ref|ZP_07772490.1| NAD+ synthetase [Enterococcus faecalis TX0102] gi|312978509|ref|ZP_07790247.1| NAD+ synthetase [Enterococcus faecalis DAPTO 516] gi|46396359|sp|Q830Y9|NADE_ENTFA RecName: Full=NH(3)-dependent NAD(+) synthetase gi|29344576|gb|AAO82334.1| NH(3)-dependent NAD+ synthetase [Enterococcus faecalis V583] gi|227176745|gb|EEI57717.1| NAD synthetase [Enterococcus faecalis HH22] gi|229305489|gb|EEN71485.1| NAD synthetase [Enterococcus faecalis ATCC 29200] gi|229309900|gb|EEN75887.1| NAD synthetase [Enterococcus faecalis TX1322] gi|255962984|gb|EET95460.1| NAD(+) synthase [Enterococcus faecalis T1] gi|256596391|gb|EEU15567.1| NAD+ synthase [Enterococcus faecalis ATCC 4200] gi|256684511|gb|EEU24206.1| NAD+ synthase [Enterococcus faecalis T3] gi|256710876|gb|EEU25919.1| NH(3)-dependent NAD+ synthetase [Enterococcus faecalis T8] gi|256948357|gb|EEU64989.1| NAD+ synthase [Enterococcus faecalis DS5] gi|256951636|gb|EEU68268.1| NAD+ synthase [Enterococcus faecalis Merz96] gi|256954237|gb|EEU70869.1| NAD+ synthase [Enterococcus faecalis HIP11704] gi|256989885|gb|EEU77187.1| NAD+ synthase [Enterococcus faecalis E1Sol] gi|256992427|gb|EEU79729.1| NAD+ synthase [Enterococcus faecalis Fly1] gi|256995634|gb|EEU82936.1| NAD+ synthase [Enterococcus faecalis D6] gi|256999575|gb|EEU86095.1| NAD+ synthase [Enterococcus faecalis CH188] gi|257161855|gb|EEU91815.1| NAD+ synthase [Enterococcus faecalis T11] gi|291078566|gb|EFE15930.1| NAD+ synthetase [Enterococcus faecalis R712] gi|291083734|gb|EFE20697.1| NAD+ synthetase [Enterococcus faecalis S613] gi|294451505|gb|EFG19965.1| NAD+ synthetase [Enterococcus faecalis PC1.1] gi|300849201|gb|EFK76951.1| NAD+ synthase [Enterococcus faecalis TUSoD Ef11] gi|306498557|gb|EFM68059.1| NAD+ synthetase [Enterococcus faecalis TX0411] gi|306506507|gb|EFM75666.1| NAD+ synthetase [Enterococcus faecalis TX2134] gi|306511566|gb|EFM80565.1| NAD+ synthetase [Enterococcus faecalis TX0855] gi|306512972|gb|EFM81613.1| NAD+ synthetase [Enterococcus faecalis TX4248] gi|310626054|gb|EFQ09337.1| NAD+ synthetase [Enterococcus faecalis DAPTO 512] gi|310628491|gb|EFQ11774.1| NAD+ synthetase [Enterococcus faecalis TX0102] gi|310634063|gb|EFQ17346.1| NAD+ synthetase [Enterococcus faecalis TX0635] gi|311288658|gb|EFQ67214.1| NAD+ synthetase [Enterococcus faecalis DAPTO 516] gi|311292992|gb|EFQ71548.1| NAD+ synthetase [Enterococcus faecalis TX0470] gi|315025238|gb|EFT37170.1| NAD+ synthetase [Enterococcus faecalis TX2137] gi|315030321|gb|EFT42253.1| NAD+ synthetase [Enterococcus faecalis TX4000] gi|315035787|gb|EFT47719.1| NAD+ synthetase [Enterococcus faecalis TX0027] gi|315148597|gb|EFT92613.1| NAD+ synthetase [Enterococcus faecalis TX4244] gi|315151920|gb|EFT95936.1| NAD+ synthetase [Enterococcus faecalis TX0031] gi|315159199|gb|EFU03216.1| NAD+ synthetase [Enterococcus faecalis TX0312] gi|315162862|gb|EFU06879.1| NAD+ synthetase [Enterococcus faecalis TX0645] gi|315164950|gb|EFU08967.1| NAD+ synthetase [Enterococcus faecalis TX1302] gi|315170128|gb|EFU14145.1| NAD+ synthetase [Enterococcus faecalis TX1342] gi|315173373|gb|EFU17390.1| NAD+ synthetase [Enterococcus faecalis TX1346] gi|315576226|gb|EFU88417.1| NAD+ synthetase [Enterococcus faecalis TX0309B] gi|315579196|gb|EFU91387.1| NAD+ synthetase [Enterococcus faecalis TX0630] gi|315582942|gb|EFU95133.1| NAD+ synthetase [Enterococcus faecalis TX0309A] gi|323481558|gb|ADX80997.1| NAD+ synthase [Enterococcus faecalis 62] gi|327535853|gb|AEA94687.1| NAD(+) synthase [Enterococcus faecalis OG1RF] gi|329578139|gb|EGG59550.1| NAD+ synthase [Enterococcus faecalis TX1467] Length = 275 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT-- 323 +P + + + + L+ Y+ K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 LPTIDPKEEVRKSIDFLKAYLTKHPFLKTFVLGISGGQDSTLAGRLAQLAMTEMREETGD 74 Query: 324 -------IMLPYKYTSPQSLEDA--AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 I LPY + ++ A A + + D+ P D + SL + +Q Sbjct: 75 MSYQFIAIRLPYGEQADEADAQAALAFIQPDVSLRVDIKPAVDAM--VGSLENAGVQ--I 130 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 S N+++R R A++ + ++ T + +E + T YGD PL L K Sbjct: 131 SDFNKGNMKARQRMITQYAVAGENAGAVIGTDHAAENVTAFFTKYGDGGADILPLFRLNK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P ++ K P+A+L +P D+ +L Y +D Sbjct: 191 ---------RQGKALLKELGA-----PEALYLKIPTADLEDDKPLVADEVALGVTYDAID 236 Query: 491 DII--KRIVENEESFINN 506 D + K++ E ++ I N Sbjct: 237 DYLEGKKVSETDQQTIEN 254 >gi|332710804|ref|ZP_08430741.1| putative amidohydrolase [Lyngbya majuscula 3L] gi|332350357|gb|EGJ29960.1| putative amidohydrolase [Lyngbya majuscula 3L] Length = 270 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 21/180 (11%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI-----QACSSAIDT 72 D+ N+ +A + A R+G +LI E F ED + I Q + Sbjct: 16 DLEKNLVQAEELIDLAVRRGAELISLPENFSFLGTEEDKITHADAIAEQSEQFLKTMAQR 75 Query: 73 LKSDTHDGGAGIVVGFPRQDQEGVLNSVVIL-DAGNIIAVRDK-----INLPNYSEFHEK 126 + GG + VG + V N+ +++ +GN +A K +NLP+ + + E Sbjct: 76 FQVTILGGGFPVPVGSSK-----VYNTALLIGSSGNELARYHKAHLFDVNLPDGNTYRES 130 Query: 127 RTFISGYSNDPIVFRDIR---LGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 T +G + P V+ LG+ +C D+ + S + +HL + GA+ LF A Y K Sbjct: 131 ETVKAG-TELPKVYSSPEFGNLGLSVCYDV-RFSELYRHLSQNGADVLFVPAAFTAYTGK 188 >gi|40890287|gb|AAR97488.1| nitrilase [uncultured organism] Length = 310 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 28/51 (54%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 + K+ + I Q PV D+AG + K EEA + G+ ++ E ++ GYP Sbjct: 1 MSKVTVGIIQARPVYYDLAGTMDKTADLIEEAAKMGIKVVSLGETWLPGYP 51 >gi|40890121|gb|AAR97405.1| nitrilase [uncultured organism] Length = 374 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 15/138 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------P 53 M +K A Q++PV+ G +AK R E ++G+ F E + YP P Sbjct: 1 MSTIVKAAAVQISPVLYSREGTVAKVVRKIHELGQKGVRFATFPETVVPYYPYFSAVQTP 60 Query: 54 EDLVFKKSFIQAC-------SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA- 105 L+ +++ S+ D + + G + +G +D + N+ ++ DA Sbjct: 61 IQLLSGTEYLKLLDQGVTVPSTTTDAIGEAARNAGMVVSIGVNERDGGTLYNAQLLFDAD 120 Query: 106 GNIIAVRDKINLPNYSEF 123 G +I R KI +Y Sbjct: 121 GTLIQRRRKITPTHYERM 138 >gi|307287553|ref|ZP_07567596.1| NAD+ synthetase [Enterococcus faecalis TX0109] gi|306501291|gb|EFM70594.1| NAD+ synthetase [Enterococcus faecalis TX0109] Length = 275 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT-- 323 +P + + + + L+ Y+ K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 LPTIDPKEEVRKSIDFLKAYLTKHPFLKTFVLGISGGQDSTLAGRLAQLAMTEMREETGD 74 Query: 324 -------IMLPYKYTSPQSLEDA--AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 I LPY + ++ A A + + D+ P D + SL + +Q Sbjct: 75 MSYQFIAIRLPYGEQADEADAQAALAFIQPDVSLRVDIKPAVDAM--VGSLENAGVQ--I 130 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 S N+++R R A++ + ++ T + +E + T YGD PL L K Sbjct: 131 SDFNKGNMKARQRMITQYAVAGENAGAVIGTDHAAENVTAFFTKYGDGGADILPLFRLNK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P ++ K P+A+L +P D+ +L Y +D Sbjct: 191 ---------RQGKALLKELGA-----PEALYLKIPTADLEDDKPLVADEVALGVTYDAID 236 Query: 491 DII--KRIVENEESFINN 506 D + K++ E ++ I N Sbjct: 237 DYLEGKKVSETDQQTIEN 254 >gi|296227744|ref|XP_002759511.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] [Callithrix jacchus] Length = 693 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + T +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCTGTYTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 259 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|21593107|gb|AAM65056.1| nitrilase 3 [Arabidopsis thaliana] Length = 346 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 26/48 (54%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +++ I Q + V D + KA + EA +G L+LF E FI GYP Sbjct: 25 VRVTIVQSSTVYNDTPATLHKAEKFIVEAASKGAKLVLFPEAFIGGYP 72 >gi|149197528|ref|ZP_01874579.1| carbon-nitrogen hydrolase family protein [Lentisphaera araneosa HTCC2155] gi|149139546|gb|EDM27948.1| carbon-nitrogen hydrolase family protein [Lentisphaera araneosa HTCC2155] Length = 286 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 20/209 (9%) Query: 32 EANRQGMDLILFTELFISGY-----PPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVV 86 +A + G ++I ELF+S Y E + + Q + + + G + + Sbjct: 28 DAAKSGANIICTQELFLSNYFCREQNTEHFQYAQKIDQ---ELLADFQQCAKNHGVVLAL 84 Query: 87 GFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI- 143 F + GV N+ VI+DA G + K+++P F EK F G P+ Sbjct: 85 SFFEEALNGVYYNTSVIIDADGTYLGKYRKLHIPQDPYFEEKFYFTPGNLGVPVFETQFG 144 Query: 144 RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK-----LKKRHEIVTGQISHV 198 ++ ++IC D W + GAE + A + ++ ++ H Q+ H Sbjct: 145 KISLIICWDQW-FPETARLACLAGAEIILVPTAIGWLPDEKEEHGAQQAHSWTQVQLGHA 203 Query: 199 HLPIIY---VNQVGGQDELIFDGASFCFD 224 Y VN+VG ++ + F G SF D Sbjct: 204 VANGCYYAAVNRVGIEEPIQFWGQSFISD 232 >gi|225021883|ref|ZP_03711075.1| hypothetical protein CORMATOL_01915 [Corynebacterium matruchotii ATCC 33806] gi|224945340|gb|EEG26549.1| hypothetical protein CORMATOL_01915 [Corynebacterium matruchotii ATCC 33806] Length = 634 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%) Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG--LSGGIDSALCAAIAVDALGKENVQT 323 ++P +E+ ++ +L D V+K+ V +G LSGGIDS AA+A N+ T Sbjct: 231 FVPKSKEQDLFDRIARALEDSVEKHMRADVTVGSFLSGGIDSTAIAALA--KRHNPNLLT 288 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDV 352 ++ ++ AA AKA+G ++ V Sbjct: 289 FTTGFEREGYSEVDVAAESAKAIGVEHIV 317 >gi|170732063|ref|YP_001764010.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia MC0-3] gi|169815305|gb|ACA89888.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia cenocepacia MC0-3] Length = 275 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 24/152 (15%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPED-LVFKKSFIQACSSAIDTLKS 75 D+ N+A+ARR EA +G L+L E F G+ D L + + I + Sbjct: 23 DVTRNLAEARRLIAEAAGEGAQLVLLPEYFCFMGHRDTDKLALAEPYR---DGPIQQFLA 79 Query: 76 DTHDGGAGIVVG------FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE----FH 124 D V+G P D+ VLN+ ++ D +GN A DKI+L N+ + F Sbjct: 80 DAARRHGIWVIGGTLPLKAPEPDR--VLNTTLVFDPSGNEAARYDKIHLFNFEKGDESFD 137 Query: 125 EKRTFISGYSNDPIVFRDI---RLGILICEDI 153 E RT +G D +V D ++G+ +C D+ Sbjct: 138 EARTIRAG---DTVVAFDAPFGQVGLSVCYDL 166 >gi|299132924|ref|ZP_07026119.1| Nitrilase [Afipia sp. 1NLS2] gi|298593061|gb|EFI53261.1| Nitrilase [Afipia sp. 1NLS2] Length = 332 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 25/49 (51%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K A Q PV D+ + K + +A RQG L+LF E F+S YP Sbjct: 22 KYLAACVQAAPVAFDLQKTLEKTQDLSADAARQGAKLVLFPEAFVSAYP 70 >gi|71733760|ref|YP_275137.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554313|gb|AAZ33524.1| hydrolase, carbon-nitrogen family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 246 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 47/229 (20%), Positives = 92/229 (40%), Gaps = 17/229 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ GDI N+A + A +LF EL ++GY P+ + + + A Sbjct: 6 LAVAQFCSARGDIEQNLAGHLAFMQRAADLRASYLLFPELSLTGYEPD--LARALALHAD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN-YSEFHE 125 + ++ +K+ +G P + N +++ A A D Y E Sbjct: 64 DARLEPIKALAMKLRLVTTIGVPLKGA----NDSILIGALTFAADGDVTTYAKQYLHPGE 119 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 + F +G + + R+G+ +C D + +++ + + + S+ SP Sbjct: 120 DKVFSAGNKDCYLPIDQQRIGLCVCADFTQPAHVQRIAEGGAWVYAASVLISP---GGYA 176 Query: 186 KRHEIVTGQISHVHLPIIYVNQ---VGGQDEL----IFDGASFCFDGQQ 227 + E++ G +LP++ N GG + ++DGA G Q Sbjct: 177 QDAELLAGHARRHNLPVLVANHGAPTGGWESAGRSGLWDGAGRWIGGMQ 225 >gi|325578616|ref|ZP_08148716.1| transcription regulator ExsB [Haemophilus parainfluenzae ATCC 33392] gi|325159852|gb|EGC71982.1| transcription regulator ExsB [Haemophilus parainfluenzae ATCC 33392] Length = 225 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K ++ SGG DS C A+ G ENV+T+ Y LE A AK LG K Sbjct: 7 NHNRKALVIFSGGQDSTTCLIQAIAEYGVENVETVTFQYGQRHSIELEKARWIAKDLGVK 66 >gi|157273520|gb|ABV27419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Candidatus Chloracidobacterium thermophilum] Length = 392 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 28/168 (16%) Query: 293 HKVIIGLSGGIDSALCAAI----AVDALG-----------KENVQTIMLPYKYTSPQSLE 337 ++ + +SGG+DS+ AA+ D +G + + LP + S L Sbjct: 3 ERIAVAMSGGVDSSTAAALLKEQGYDVVGFSMQLWNQRRINVDAEGNPLPSRCCSLDDLY 62 Query: 338 DAAACAKALGCKYDVLPIHD-----LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 DA A A+ALG + VL + +V F ++S PS VA N SR++ + L+ Sbjct: 63 DARAVAEALGIPFYVLNFEEEFEARVVRPF--VVSYLNGNTPSPCVACN--SRMKFDTLV 118 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 AL+ A + T + + + T ++ G +DL+K Q + L Sbjct: 119 ALARDVGAAKVATGHYARVQFNDTTGRWELRKG----RDLHKDQSYFL 162 >gi|212529588|ref|XP_002144951.1| nitrilase, putative [Penicillium marneffei ATCC 18224] gi|210074349|gb|EEA28436.1| nitrilase, putative [Penicillium marneffei ATCC 18224] Length = 322 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 13/128 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE---DLV 57 M K +++ Q PV D+ G++ K E+A G++++ F E++I GYP V Sbjct: 1 MSKIVRVGAVQSEPVWLDLEGSVDKTISLIEKAAADGVNVLGFPEVWIPGYPWSMWTSAV 60 Query: 58 FKKSFI---------QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGN 107 S I + S + +++ + G +V+G+ +D + + +D +G Sbjct: 61 INNSHIIHDYMNNSMRKDSPQMKRIQAAVKEAGMVVVLGYSERDGASLYMAQSFIDPSGE 120 Query: 108 IIAVRDKI 115 I+ R KI Sbjct: 121 IVHHRRKI 128 >gi|88798276|ref|ZP_01113862.1| cell cycle protein MesJ [Reinekea sp. MED297] gi|88779052|gb|EAR10241.1| cell cycle protein MesJ [Reinekea sp. MED297] Length = 439 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT--SPQSLED 338 L L+ +++N V +G SGG+DS L ++A A G + V I + ++ + + Q E Sbjct: 13 LDLQRELRRNFQPPVYVGYSGGVDSILLLSLACQAYGADQVTAIHVNHQVSEFATQWQEH 72 Query: 339 AAACAKALGC 348 A A+ LGC Sbjct: 73 CVAQAEQLGC 82 >gi|260663155|ref|ZP_05864047.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lactobacillus fermentum 28-3-CHN] gi|260552347|gb|EEX25398.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Lactobacillus fermentum 28-3-CHN] Length = 259 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 46/230 (20%), Positives = 94/230 (40%), Gaps = 9/230 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI- 63 +++AI QL+ + N A+ +EA + G D+I+ E++ +GY + L Sbjct: 1 MRVAIDQLDVALARPDQNFAQVAADVKEAAKAGADVIVIPEMWNTGYALDQLGDLADLDG 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE 122 Q + L D G V R + N+ + D G ++ DK++L + Sbjct: 61 QRTKQTLARLARDNQINIVGGSVAIKRWKR--FYNTTYVYDRTGQLVGNYDKVHL--FGL 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 +E +G++ + ++ IC D+ + + + K G++ LF P Sbjct: 117 MNEGEFISAGHAPNRFALDGVKAASAICYDL-RFPEWLRTISKGGSQILFLPAQWPV--Q 173 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 ++ + ++ + ++ VN+VG F G S D ++ F+ Sbjct: 174 RIDQWRILLQARAIENQCFVVAVNRVGDDAANHFGGNSMVIDPLGKVLFE 223 >gi|119595198|gb|EAW74792.1| NAD synthetase 1, isoform CRA_a [Homo sapiens] gi|193783645|dbj|BAG53556.1| unnamed protein product [Homo sapiens] Length = 446 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 57/255 (22%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAI----------AVDALGKE---NVQTIMLPYK 329 L D+++++ ++ LSGG+DSA A + AV + +E +V+TI+ Sbjct: 80 LWDFLRRSQQAGFLLPLSGGVDSAATACLIYSMCCQVCEAVRSGNEEVLADVRTIVNQIS 139 Query: 330 YTSPQSLEDAAA-----------------CAKA------LGCKYDVLPIHDLVNHFFSLM 366 YT PQ D C +A +G + L I V + Sbjct: 140 YT-PQDPRDLCGRILTTCYMASKNSSQETCTRARELAQQIGSHHISLNIDPAVKAVMGIF 198 Query: 367 SQFLQEEP----------SGIVAENIQSRIRGNI--------LMALSNHSKAMLLTTSNK 408 S + P + +N+Q+RIR + L + H ++L ++N Sbjct: 199 SLVTGKSPLFAAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGVHGGLLVLGSANV 258 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E +GY T Y S NP+ + KT + + L + ++ P+ E Sbjct: 259 DESLLGYLTKYDCSSADINPIGGISKTDLRAFVQFCIQRFQLPALQSI--LLAPATAELE 316 Query: 469 PSAELRPHQTDQESL 483 P A+ + QTD+E + Sbjct: 317 PLADGQVSQTDEEDM 331 >gi|40890137|gb|AAR97413.1| nitrilase [uncultured organism] Length = 316 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 29/174 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP--------EDL 56 K+A Q +PV D A I KA A R+G LI+F E F+ YP ++ Sbjct: 10 FKVAAVQASPVFLDRAATIDKACDLIATAGREGARLIVFPEAFVPAYPDWVWAIPAGDEG 69 Query: 57 VFKKSFIQACSSAIDTLKSDTHD--------GGAGIVVGFPRQDQEG----VLNSVVILD 104 + + + + ++A+ T+ SD + A +V+G ++ E + N+++ +D Sbjct: 70 MLNELYAELLANAV-TIPSDATERLCRAARLANAYVVMGMSERNAEASGASLYNTLLYID 128 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKN 156 A I + + +P E+ + G + V+ +LG LIC W+N Sbjct: 129 AQGQILGKHRKLVPTGG---ERLVWAQGDGSTLEVYDTPLGKLGGLIC---WEN 176 >gi|15229936|ref|NP_190018.1| NIT3 (NITRILASE 3); indole-3-acetonitrile nitrilase/ indole-3-acetonitrile nitrile hydratase/ nitrilase [Arabidopsis thaliana] gi|1171770|sp|P46010|NRL3_ARATH RecName: Full=Nitrilase 3 gi|508735|gb|AAA19627.1| nitrilase [Arabidopsis thaliana] gi|6580144|emb|CAA68936.2| nitrilase 3 [Arabidopsis thaliana] gi|7649383|emb|CAB89000.1| nitrilase 3 [Arabidopsis thaliana] gi|27754296|gb|AAO22601.1| putative nitrilase 3 [Arabidopsis thaliana] gi|28393863|gb|AAO42339.1| putative nitrilase 3 [Arabidopsis thaliana] gi|332644369|gb|AEE77890.1| nitrilase 3 [Arabidopsis thaliana] Length = 346 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 26/48 (54%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +++ I Q + V D + KA + EA +G L+LF E FI GYP Sbjct: 25 VRVTIVQSSTVYNDTPATLDKAEKFIVEAASKGAKLVLFPEAFIGGYP 72 >gi|222481007|ref|YP_002567244.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Halorubrum lacusprofundi ATCC 49239] gi|222453909|gb|ACM58174.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Halorubrum lacusprofundi ATCC 49239] Length = 334 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++ SGG+DS++ AA+A DALG + V + + L+DA A +G +++ + Sbjct: 61 VLVAFSGGVDSSVVAALACDALGDDAVACTARSETLPAAE-LDDAERVAGEIGIRHETVT 119 Query: 355 IHDLVNHFF 363 +L + F Sbjct: 120 FSELDDPNF 128 >gi|305680759|ref|ZP_07403566.1| asparagine synthase (glutamine-hydrolyzing) [Corynebacterium matruchotii ATCC 14266] gi|305658964|gb|EFM48464.1| asparagine synthase (glutamine-hydrolyzing) [Corynebacterium matruchotii ATCC 14266] Length = 640 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%) Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG--LSGGIDSALCAAIAVDALGKENVQT 323 ++P +E+ ++ +L D V+K+ V +G LSGGIDS AA+A N+ T Sbjct: 237 FVPKSKEQDLFDRIARALEDSVEKHMRADVTVGSFLSGGIDSTAIAALA--KRHNPNLLT 294 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDV 352 ++ ++ AA AKA+G ++ V Sbjct: 295 FTTGFEREGYSEVDVAAESAKAIGVEHIV 323 >gi|40890169|gb|AAR97429.1| nitrilase [uncultured organism] Length = 336 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 22/169 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ A Q+ P G + K + +EA +G+ +I+F E FI YP Sbjct: 7 IRAAAVQITPEFDSADGTVKKVCKVIDEAGAKGVQIIVFPETFIPYYPYFSFITPPVSAG 66 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAV 111 E L + + + +V+G +D + N+ +I D G ++ Sbjct: 67 AEHLKLYEKSVVIPGPVTQAIAERARVNQMVVVLGVNERDNGSLYNTQLIFDTNGELMLK 126 Query: 112 RDKINLPNYSEFHEKRTFISG-YSNDPIVFRDI-RLGILICEDIWKNSN 158 R KI P Y HE+ + G S +V I R+G L C W++ N Sbjct: 127 RRKIT-PTY---HERMIWGQGDASGLKVVETSIARVGALAC---WEHYN 168 >gi|206561619|ref|YP_002232384.1| putative carbon-nitrogen hydrolase protein [Burkholderia cenocepacia J2315] gi|198037661|emb|CAR53604.1| putative carbon-nitrogen hydrolase protein [Burkholderia cenocepacia J2315] Length = 275 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 24/152 (15%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPED-LVFKKSFIQACSSAIDTLKS 75 D+ N+A+ARR EA +G L+L E F G+ D L + + I + Sbjct: 23 DVTRNLAEARRLIAEAAGEGAQLVLLPEYFCFMGHRDTDKLALAEPYR---DGPIQQFLA 79 Query: 76 DTHDGGAGIVVG------FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE----FH 124 D V+G P D+ VLN+ ++ D +GN A DKI+L N+ + F Sbjct: 80 DAARRHGIWVIGGTLPLKAPEPDR--VLNTTLVFDPSGNEAARYDKIHLFNFEKGDESFD 137 Query: 125 EKRTFISGYSNDPIVFRDI---RLGILICEDI 153 E RT +G D +V D ++G+ +C D+ Sbjct: 138 EARTIRAG---DTVVAFDAPFGQVGLSVCYDL 166 >gi|165976518|ref|YP_001652111.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303253331|ref|ZP_07339480.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|189038889|sp|B0BQ32|QUEC_ACTPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC gi|165876619|gb|ABY69667.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302648013|gb|EFL78220.1| queuosine biosynthesis protein QueC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 222 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K ++ SGG DS C A+ G +NV+ + Y LE AA AK LG K Sbjct: 2 NSTPKAVVIFSGGQDSTTCLFQAIQEFGVKNVEVVTFQYGQRHAIELEKAAWIAKDLGVK 61 >gi|317053098|ref|YP_004119452.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pantoea sp. At-9b] gi|316953425|gb|ADU72896.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pantoea sp. At-9b] Length = 307 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 32/193 (16%) Query: 31 EEANRQGMDLILFTELFISGYPP----EDLVFKKSFIQ--ACSSAIDTLKSDTHDGGAGI 84 E+A +QG +L++F EL ++ + P ED S+ + + L + + G I Sbjct: 32 EQARQQGCELVVFPELALTTFFPRWYMEDQQEVDSWFEREMPGTVTQPLFDFSREHGIAI 91 Query: 85 VVGFPRQDQEGV-LNSVVILD-AGNIIAVRDKINLPNYSEFH--------EKRTFISG-- 132 G+ EG N+ ++ D GNI+ K++LP + E+ EKR F G Sbjct: 92 SFGYAELTPEGRHFNTSIVTDRQGNIVGKYRKVHLPGHDEYDPHRDFQHLEKRYFEPGDL 151 Query: 133 ----YSNDPIVFRDIRLGILICED-IWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 + N+ V +G+ IC D W + + + QG E L +L + N L +R Sbjct: 152 GFPTWENEGAV-----MGMCICNDRRWPETY--RVMGLQGVE-LITLGYNTPSVNAL-ER 202 Query: 188 HEIVTGQISHVHL 200 +E T ++ H L Sbjct: 203 NEGETKRLFHSEL 215 >gi|312622161|ref|YP_004023774.1| PP-loop domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202628|gb|ADQ45955.1| PP-loop domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 267 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ-SLEDAAACAKALGC 348 ++ V++ SGG+DS ++ D LGK+ + + SPQ EDAA AK +G Sbjct: 18 KSYESVLVAFSGGVDSTFLLKVSFDVLGKKAIG--VFSSSVLSPQREKEDAAKLAKDIGA 75 Query: 349 KYDVL 353 + V+ Sbjct: 76 RLIVI 80 >gi|291400046|ref|XP_002716320.1| PREDICTED: guanine monophosphate synthetase [Oryctolagus cuniculus] Length = 713 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V KV++ LSGG+DS +C A+ Sbjct: 225 NFLYDIAGCSGTFTVQNRELE---CIREIKERV---GMSKVLVLLSGGVDSTVCTALLNR 278 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 279 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 317 >gi|221119829|ref|XP_002168506.1| PREDICTED: similar to guanine monphosphate synthetase, partial [Hydra magnipapillata] Length = 652 Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 11/130 (8%) Query: 254 WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 +N+++ + T LQ + +C+ +R+ V KNN V+ +SGG+DS +C + Sbjct: 164 FNFLTKIAGCTQNFTLQCRQT---SCMNEIREAVGKNN---VLSLVSGGVDSTVCTILLQ 217 Query: 314 DALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 A+G E V + + + E + G K L +++ +HF ++ ++ Sbjct: 218 KAIGVERVIAVHIDNGFLRKDESEKVKQLYEYHGLK---LHVYNEKHHFLHSSTRIPKKT 274 Query: 374 PSGIVAENIQ 383 +G V NIQ Sbjct: 275 ETGTV--NIQ 282 >gi|299535025|ref|ZP_07048351.1| amidohydrolase [Lysinibacillus fusiformis ZC1] gi|298729521|gb|EFI70070.1| amidohydrolase [Lysinibacillus fusiformis ZC1] Length = 264 Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 29/52 (55%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL 56 +KI QLN G + N A+A EA +QG ++I+ E++ +GY E L Sbjct: 1 MKIGCIQLNVGFGKVEENFARAEEKIHEAAKQGAEIIVLPEMWNTGYALEKL 52 >gi|254246263|ref|ZP_04939584.1| hypothetical protein BCPG_00997 [Burkholderia cenocepacia PC184] gi|124871039|gb|EAY62755.1| hypothetical protein BCPG_00997 [Burkholderia cenocepacia PC184] Length = 275 Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 24/152 (15%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPED-LVFKKSFIQACSSAIDTLKS 75 D+ N+A+ARR EA +G L+L E F G+ D L + + I + Sbjct: 23 DVTRNLAEARRLIAEAAGEGAQLVLLPEYFCFMGHRDTDKLALAEPYR---DGPIQQFLA 79 Query: 76 DTHDGGAGIVVG------FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE----FH 124 D V+G P D+ VLN+ ++ D +GN A DKI+L N+ + F Sbjct: 80 DAARRHGIWVIGGTLPLKAPEPDR--VLNTTLVFDPSGNEAARYDKIHLFNFEKGDESFD 137 Query: 125 EKRTFISGYSNDPIVFRDI---RLGILICEDI 153 E RT +G D +V D ++G+ +C D+ Sbjct: 138 EARTIRAG---DTVVSFDAPFGQVGLSVCYDL 166 >gi|311269579|ref|XP_003132551.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Sus scrofa] Length = 330 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 22/159 (13%) Query: 202 IIYVNQV-GGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ------W 254 I+ V +V GG DE F Q+ + + S++ + ++H + L++ Sbjct: 11 ILKVKKVLGGVDE---------FSTQRPAQGGIANESKKLYGVQFHPEVGLTENGKVILK 61 Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V KV++ LSGG+DS +C A+ Sbjct: 62 NFLYDIAGCSGTFTVQNRELE---CIREIKERV---GTSKVLVLLSGGVDSTVCTALLNR 115 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 116 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 154 >gi|238059306|ref|ZP_04604015.1| hydrolase [Micromonospora sp. ATCC 39149] gi|237881117|gb|EEP69945.1| hydrolase [Micromonospora sp. ATCC 39149] Length = 300 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 27/163 (16%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK--- 59 + L++A AQ+ GD+AGN A A A +G L++F EL + GY L Sbjct: 29 EPLRVAAAQIEAAGGDLAGNAAAHVAAIASAATRGARLVVFPELSLCGYDYPLLAADVAR 88 Query: 60 ----------KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNII 109 ++ QAC + T +V G R+ + + V+ G + Sbjct: 89 CEVEVGDPVLRTVGQACRAHTVT----------AVVGGCARRADGWAIAAFVVGPDGAVA 138 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICED 152 A K +L + E+ F++G+++ + R RLG+ +C D Sbjct: 139 ATYHKRHL----DADEREVFVAGHTDTIVQVRGWRLGLGVCYD 177 >gi|317404507|gb|EFV84916.1| hypothetical protein HMPREF0005_02470 [Achromobacter xylosoxidans C54] Length = 345 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 17/137 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L K A Q PV D + K EA G L+ F E+F+S YP V Sbjct: 4 LPVFKAAAVQAAPVFLDTDATVEKTCALIAEAAGNGASLVAFPEVFVSAYPYWSWVMNPV 63 Query: 62 -----FIQACSSAID-------TLKSDTHDGGAGIVVGFPRQDQEGV---LNSVVIL-DA 105 F + C SAI+ + +VVG + + GV N++V + D Sbjct: 64 QGSPWFEKLCKSAIELPGPEIRRIAQAARQHRVNVVVGVNERSRHGVGTIYNTMVFINDE 123 Query: 106 GNIIAVRDKINLPNYSE 122 G I+ K+ +P ++E Sbjct: 124 GRILGRHRKL-VPTWAE 139 >gi|262200783|ref|YP_003271991.1| nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Gordonia bronchialis DSM 43247] gi|262084130|gb|ACY20098.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Gordonia bronchialis DSM 43247] Length = 286 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 10/196 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++++A+AQ++ D+ N+A EA G +L++F E + + + Sbjct: 1 MSRMRVAMAQISSS-DDVEANLATVVAGIGEAAANGAELVVFPEAAMCRF---GVPLGPV 56 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Q D + + D G +V G F D V N+++I G KI+L + Sbjct: 57 AQQLDGPWADAVSAAAVDAGISVVAGMFTPADDGRVHNTLLIATPGGERIEYYKIHLYDA 116 Query: 121 SEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 F E RT G + P+ F D +G+ C D+ + N+ L ++GA+ + + Sbjct: 117 FGFRESRTVAPG--DRPVTFAVGDATVGVATCYDV-RFPNLFTTLARRGADVIVVPTSWG 173 Query: 179 YYHNKLKKRHEIVTGQ 194 KL + +VT + Sbjct: 174 SGRGKLHQWEVLVTAR 189 >gi|33861847|ref|NP_893408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81572901|sp|Q7TTQ1|MNMA_PROMP RecName: Full=tRNA-specific 2-thiouridylase mnmA gi|33640215|emb|CAE19750.1| tRNA methyl transferase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 390 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS--PQSLEDAAACAKALGCKY 350 K+I+GLSGG+DS+L AA+ ++ K T+ L S + L DAA + LG + Sbjct: 24 QKIIVGLSGGVDSSLSAALLIEDGWKVEGLTLWLMKGEGSCCSEGLVDAAGLCEDLGINH 83 Query: 351 DVL 353 ++L Sbjct: 84 NIL 86 >gi|309791875|ref|ZP_07686358.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Oscillochloris trichoides DG6] gi|308226047|gb|EFO79792.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Oscillochloris trichoides DG6] Length = 288 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%) Query: 84 IVVGFPRQDQEGVL-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIV-F 140 I+ + EG+ N+ V+LDA G ++ K+++P+ F+EK F G + Sbjct: 81 IIASLFEKRAEGLYHNTAVVLDADGTLVGKYRKMHIPDDPLFYEKFYFTPGDLGFQVFQT 140 Query: 141 RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 R R+G+L+C D W + +GA+ LF A Sbjct: 141 RFARVGVLVCWDQW-YPEAARLTALRGADLLFYPTA 175 >gi|57641851|ref|YP_184329.1| carbon-nitrogen hydrolase [Thermococcus kodakarensis KOD1] gi|57160175|dbj|BAD86105.1| carbon-nitrogen hydrolase [Thermococcus kodakarensis KOD1] Length = 264 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A Q+ PV D N ++A + EA QG L++ ELF +GY + ++ + Sbjct: 1 MKVAYVQMEPVFLDPEANYSRAEKLIREAADQGAKLVVLPELFDTGY---NFRSREEVEE 57 Query: 65 ACSSAIDTLKSD-----THDGGAGIVVGFPRQDQEGVL-NSVVILD--AGNIIAVRDKIN 116 D ++ + IV G +D++G L NS V++ I KI+ Sbjct: 58 VAGQIPDGPTTEFLVELAKELEVFIVAGTAEKDEKGNLYNSAVLVGPVGWGYIGKYRKIH 117 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFL 171 L N EK F G + I ++G++IC D W + L +GA+ + Sbjct: 118 LFN----REKLFFRPGNLGFHVFNIGIAKVGVMICFD-WFFPESARTLALKGADVI 168 >gi|300717063|ref|YP_003741866.1| amidohydrolase [Erwinia billingiae Eb661] gi|299062899|emb|CAX60019.1| Putative amidohydrolase [Erwinia billingiae Eb661] Length = 252 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 21/185 (11%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGY-----PPEDLVFKK 60 IA AQ GDI NI++ +A +DL++F EL ++GY P + Sbjct: 5 SIAAAQSGSRPGDITWNISRHLEFILQAASHHIDLLIFPELSLTGYELSLVPTLAMTLDD 64 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +Q + A + IV+G P + E +L S V K NL Sbjct: 65 PRLQVFADAATAHQMS-------IVIGLPLVNGEDILLSAVAFLPDGTKVAYGKRNL--- 114 Query: 121 SEFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS--LNAS 177 F +++ F + P+ ++ + + IC DI + ++GA + L + Sbjct: 115 --FGDEKLFFTAGEGVPLFGYQRHHVAMAICADI-SVEEYARDAARRGANLYATGVLVSE 171 Query: 178 PYYHN 182 YHN Sbjct: 172 KGYHN 176 >gi|291534231|emb|CBL07344.1| conserved hypothetical protein TIGR00268 [Megamonas hypermegale ART12/1] Length = 270 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 ++ V + SGG+DS++ A ALG + + I + + + DA AK +G K+ Sbjct: 13 SYQSVAVAFSGGVDSSVLAKATQIALGDKAI-AITAVSELITTNEISDAKKVAKLIGIKH 71 Query: 351 DVLPIHDLVNHFFS 364 ++ + DL + F+ Sbjct: 72 ELFTVDDLADKKFT 85 >gi|153208935|ref|ZP_01947148.1| GMP synthase [Coxiella burnetii 'MSU Goat Q177'] gi|165924007|ref|ZP_02219839.1| GMP synthase [Coxiella burnetii RSA 334] gi|212218751|ref|YP_002305538.1| GMP synthase [Coxiella burnetii CbuK_Q154] gi|226738429|sp|B6J7Z4|GUAA_COXB1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|120575593|gb|EAX32217.1| GMP synthase [Coxiella burnetii 'MSU Goat Q177'] gi|165916552|gb|EDR35156.1| GMP synthase [Coxiella burnetii RSA 334] gi|212013013|gb|ACJ20393.1| GMP synthase (glutamine-hydrolyzing) [Coxiella burnetii CbuK_Q154] Length = 524 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 S+RD +K +VI+GLSGG+DSA+ A + A+G + V ++ Sbjct: 217 SIRDIQEKVGKEQVIVGLSGGVDSAVTATLVRKAIGDQLVCVLV 260 >gi|262306107|gb|ACY45646.1| gln amidotransferase [Scolopendra polymorpha] Length = 197 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%) Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 C+ +RD V HKV++ +SGG+DS +CAA+ AL +E V Sbjct: 32 CCINHIRDTV---GTHKVLMLVSGGVDSTVCAALLRKALPEEQV 72 >gi|323490344|ref|ZP_08095559.1| amidohydrolase [Planococcus donghaensis MPA1U2] gi|323396014|gb|EGA88845.1| amidohydrolase [Planococcus donghaensis MPA1U2] Length = 262 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 45/235 (19%), Positives = 99/235 (42%), Gaps = 16/235 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA Q++ V G+ N + EA G D I+ E++ +GY +L + Sbjct: 1 MKIACVQMDIVFGEPEKNYQQVLNYLTEAAENGADTIVLPEMWNTGYALTEL---NTLAD 57 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE 122 + + ++ LK+ + IV G + G N++ +++ G +++ DK + + Sbjct: 58 STNRTVEMLKNFAKEKSVNIVGGSVSTEKNNGFYNTMYVVNKKGELVSEYDKAHRFGLMD 117 Query: 123 FH---EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 H E+ + + D +V+ G +IC DI + + A+ +F ++ + Sbjct: 118 EHIHLEEGDSLGTFKLDNVVY-----GGVICYDI-RFPEWIRAQALNDAKLIFV--SAEW 169 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 ++ ++ + I+ VN++G +F G++ ++ MK Sbjct: 170 PEPRIDHWRTLLQARAIENQCFIVGVNRIGRDPNNVFGGSTMVIAPWGEIRLDMK 224 >gi|269105249|ref|ZP_06157941.1| predicted amidohydrolase [Photobacterium damselae subsp. damselae CIP 102761] gi|268160513|gb|EEZ39014.1| predicted amidohydrolase [Photobacterium damselae subsp. damselae CIP 102761] Length = 252 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 32/53 (60%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL 56 K++ A+AQ + G+I N+ + ++ +A + G D+I F EL ++GY P L Sbjct: 5 KIRFALAQHKAIKGNIKENLNRHKQFCSKAAQLGADIITFPELSLTGYEPSLL 57 >gi|156937650|ref|YP_001435446.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ignicoccus hospitalis KIN4/I] gi|156566634|gb|ABU82039.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Ignicoccus hospitalis KIN4/I] Length = 259 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 12/150 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L++A+ Q+ G++ N+ + + + A ++ EL ++G+ + K + Sbjct: 3 LRVALVQMKVTDGNVHANLKRIEASLKYAIEHYSVEAAFTPELSLTGFS----IPSKEDV 58 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + I L SD G I VG + + NS +I+ G+++ VR K L + Sbjct: 59 RGAVNRIKEL-SD----GVAIGVGATYFEGDKTYNSYLIVRDGDVLHVRKKFML--FEPM 111 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDI 153 E +TF G +D++ +LIC ++ Sbjct: 112 GEHQTFARGEPPTTFYLKDLKFSVLICYEL 141 >gi|297587165|ref|ZP_06945810.1| carbon-nitrogen family hydrolase [Finegoldia magna ATCC 53516] gi|297575146|gb|EFH93865.1| carbon-nitrogen family hydrolase [Finegoldia magna ATCC 53516] Length = 244 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 46/236 (19%), Positives = 93/236 (39%), Gaps = 25/236 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF-- 62 +KI++ + + D N+ + + + G D+ +F E F+ G+ V+K Sbjct: 1 MKISLCAVEQRLNDKEFNLKQIEKYASVESANGADMCVFGESFLQGFECLSFVYKDDVGV 60 Query: 63 -IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS-VVILDAGNIIAVRDKINLPNY 120 + S+ I ++ + I G+ D +S + + G II +++ P + Sbjct: 61 PVTQNSNEIAEIRRIARENEIAISFGYIENDHGAFYSSQMTVTKRGEIINNYRRMS-PGW 119 Query: 121 SEFHEKRTFISG-----YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF--- 172 E + + G Y D + F LIC D W + ++ ++ ++ L Sbjct: 120 KEPNACSDYREGDKLYLYKMDGVSF-----STLICGDFW-DEDLYTYISMIDSDVLLWPV 173 Query: 173 --SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + +Y N+ E Q V +P+++VN +D+ GA F G+ Sbjct: 174 FVDFSVLDWYKNEF----EDYRNQSQLVPMPVLFVNSFVDEDDRAKGGAYVFFQGK 225 >gi|156062742|ref|XP_001597293.1| hypothetical protein SS1G_01487 [Sclerotinia sclerotiorum 1980] gi|154696823|gb|EDN96561.1| hypothetical protein SS1G_01487 [Sclerotinia sclerotiorum 1980 UF-70] Length = 331 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 27/52 (51%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 M KK+ A PV D I KA R +E QG+D ++F E F+ GYP Sbjct: 1 MGKKIIAAAIHAAPVFMDKKRTIEKAIRLIKEGKDQGIDFLVFPETFVPGYP 52 >gi|304382377|ref|ZP_07364879.1| glycosyl hydrolase family 25 family protein [Prevotella marshii DSM 16973] gi|304336494|gb|EFM02728.1| glycosyl hydrolase family 25 family protein [Prevotella marshii DSM 16973] Length = 422 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 20/142 (14%) Query: 71 DTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF 129 DTL + + +GI G F RQ ++ + + + D+I+ E H K Sbjct: 113 DTLVNGSRSDSSGIYSGQFSRQ---------LMANGHGVYTIEDEIDY----EGHWKNDS 159 Query: 130 ISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE 189 G+ P + +R G WK K +E ++ ++ S Y H K ++R+ Sbjct: 160 RDGFGCSPSLLHRLRAGE------WKADRFLGERVKYTSERIYGIDISKYQHGKGRRRYA 213 Query: 190 IVTGQISHVHLPIIYVNQVGGQ 211 I QI +HL I +V G+ Sbjct: 214 INWAQIRIIHLGNISKKKVAGR 235 >gi|302335489|ref|YP_003800696.1| amidohydrolase-like protein [Olsenella uli DSM 7084] gi|301319329|gb|ADK67816.1| amidohydrolase-like protein [Olsenella uli DSM 7084] Length = 643 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 33/269 (12%) Query: 202 IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS 261 I+ V +GG +F G+SF D L F E + Q + ++ + Sbjct: 199 IVGVGSLGGYGMQVFTGSSFVLDPTGALRASAPGFEESFVTCDIGGACQAGRVGSLTPEV 258 Query: 262 ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 + Q + CV LRDY+ K V + + G + S AA+A DALG +V Sbjct: 259 YDRPFHLWQ------SLCV-GLRDYLAKEQVKDVALVVDGTLRSLALAALATDALGPTHV 311 Query: 322 QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 ++ P + AA + DVLP + L+ +G+ + Sbjct: 312 HALV---DVARP-GVRVGAADGLVRSLRIDVLPTPP---------AGGLEVPSTGVATGH 358 Query: 382 IQSRIRGNI---LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 Q RG + L A ++ A++L++ +K+ +++ G + + PL D+Y + Sbjct: 359 PQVLRRGIVGAYLAAWAHDLGALVLSSLDKTTLAL-EGMPHHASAAALCPLGDVYLEDIV 417 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEK 467 + RN+ ++ ++PP+ILE+ Sbjct: 418 AMVRMRNT---------VSPILPPAILEQ 437 >gi|154245513|ref|YP_001416471.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Xanthobacter autotrophicus Py2] gi|154159598|gb|ABS66814.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Xanthobacter autotrophicus Py2] Length = 308 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 30/49 (61%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 K+K +AQ+ V D+ ++AKA +A +G ++++F E F+S YP Sbjct: 2 KVKAGVAQVGAVPFDVEASVAKAEAWIAKAGAEGCEIVVFPEAFLSVYP 50 >gi|297815550|ref|XP_002875658.1| hypothetical protein ARALYDRAFT_484849 [Arabidopsis lyrata subsp. lyrata] gi|297321496|gb|EFH51917.1| hypothetical protein ARALYDRAFT_484849 [Arabidopsis lyrata subsp. lyrata] Length = 346 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 26/48 (54%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 +++ I Q + V D + KA + EA +G L+LF E FI GYP Sbjct: 25 VRVTIVQSSTVYNDTPATLDKAEKFIVEAASKGARLVLFPEAFIGGYP 72 >gi|210623486|ref|ZP_03293831.1| hypothetical protein CLOHIR_01781 [Clostridium hiranonis DSM 13275] gi|210153544|gb|EEA84550.1| hypothetical protein CLOHIR_01781 [Clostridium hiranonis DSM 13275] Length = 271 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 17/206 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q+ V D NI+ A +EA G ++I+ E+F P E+ F + Sbjct: 1 MKIAVCQMK-VCDDKDKNISHALEMIDEAANNGAEIIVLPEMF--NCPYENSYFPIFAEE 57 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYS- 121 ++L + +V G P + + N+ + D G +I K++L + Sbjct: 58 YPGKTTESLSNAAKKNSVYLVGGSIPELEDGNIYNTSFVFDRNGELIGKHQKMHLFDIDV 117 Query: 122 ----EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----F 172 F E T SG+ + ++G+ IC DI + + + + +G+E + F Sbjct: 118 EGGVSFKESDTLSSGHKVTIVDTEFGKIGVAICYDI-RFPELSRLMALEGSELIILPAAF 176 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHV 198 ++ P H +L R + Q+ V Sbjct: 177 NMTTGP-AHWELSIRMRALDNQVYFV 201 >gi|319947770|ref|ZP_08021972.1| NAD synthetase [Dietzia cinnamea P4] gi|319438567|gb|EFV93485.1| NAD synthetase [Dietzia cinnamea P4] Length = 288 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 103/263 (39%), Gaps = 34/263 (12%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCA---AIAVDALGKENVQ-----TIMLPYKYT 331 V L DY++ ++G+SGG DS L +A + L +E ++ + LPY Sbjct: 35 VAFLVDYLRSTPASGFVLGISGGQDSTLAGRLCQLAAERLREEGMEQARFVAMRLPYGVQ 94 Query: 332 SPQS-LEDAAACAKALGC-KYDVLPIHDLVNHFFSLMSQFLQEEPSGI---VAENIQSRI 386 + ++ + A + C DV D S L ++ + V N+++R Sbjct: 95 ADEADAQIALEFIRPDACLTVDVRAASDAAAEAASTALAALPDQAGPLRDFVRGNVKARE 154 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 R A++ +++ T + +E G+ T YGD PL L K R Sbjct: 155 RMIAQYAVAGQVNHLVVGTDHAAEAVTGFFTKYGDGGVDLTPLTGLTK---------RQG 205 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 + LG P S K P+A+L + D+ LP L +I + ++ Sbjct: 206 AALLRHLG-----APESTWRKVPTADL---EDDRPGLPDEVALGVTYAQI----DDYLEG 253 Query: 507 DQEYNDETVRYVEHLLYGSEYKR 529 + + +E L GS +KR Sbjct: 254 REGVPTDAAARIESLFLGSRHKR 276 >gi|260592231|ref|ZP_05857689.1| GMP synthase [Prevotella veroralis F0319] gi|260535865|gb|EEX18482.1| GMP synthase [Prevotella veroralis F0319] Length = 514 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +VI+GLSGG+DS++CA + A+GK N+ I + + + K LG Sbjct: 215 RVILGLSGGVDSSVCATLLNKAIGK-NLTCIFVDHGMLRKNEFQKVMDAYKGLG 267 >gi|78212421|ref|YP_381200.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. CC9605] gi|123578503|sp|Q3AL87|MNMA_SYNSC RecName: Full=tRNA-specific 2-thiouridylase mnmA gi|78196880|gb|ABB34645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. CC9605] Length = 383 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDA 339 +L Q H+V IGLSGG+DS+L AA+ V+A + T+ L + L DA Sbjct: 14 ALERLRQWPGEHRVAIGLSGGVDSSLTAALLVEAGWEVEGLTLWLMSGKGACCAEGLVDA 73 Query: 340 AACAKALGCKYDVLPIHD 357 A + LG + V+ + + Sbjct: 74 AGICEQLGIPHHVVDMRE 91 >gi|262306055|gb|ACY45620.1| gln amidotransferase [Idiogaryops pumilis] Length = 196 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%) Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 +Q+ Q N++ D S + +Q EA+ C+ ++ V N KV++ LSGG+DS +C Sbjct: 7 KQMMQ-NFLYDISGLSGTFTMQSREAE---CIEYIKKIVGDN---KVLMLLSGGVDSTVC 59 Query: 309 AAIAVDALGKENVQTI 324 A+ AL K+ V I Sbjct: 60 TALLGSALRKDQVIAI 75 >gi|224824583|ref|ZP_03697690.1| exsB protein [Lutiella nitroferrum 2002] gi|224603076|gb|EEG09252.1| exsB protein [Lutiella nitroferrum 2002] Length = 230 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 31/66 (46%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K ++ LSGG DS C A+ G +NV+ + Y L+ A A G Sbjct: 2 NSSDKALVVLSGGQDSTTCLYWALQRFGADNVEAVTFDYGQRHRVELDSARTIAALAGVP 61 Query: 350 YDVLPI 355 + VLPI Sbjct: 62 HTVLPI 67 >gi|187933889|ref|YP_001887501.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium botulinum B str. Eklund 17B] gi|187722042|gb|ACD23263.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium botulinum B str. Eklund 17B] Length = 259 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 9/118 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--PEDLVFKKSFIQ 64 I I Q++ + D N+ K + EEA+ + ++LILF E+ ++G E L+ ++ I Sbjct: 3 IGIGQIDVLWEDYFANMKKIKILVEEASIKDVELILFPEMALTGVTLDIEKLILERDEIV 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + +K++ + G +G+ ++ D +G+ N ++I + G ++ KI+L Y Sbjct: 63 SWCREL-AIKNNINIG-----LGYGKKIDNKGLNNYIIISNLGEVLCDYSKIHLFTYG 114 >gi|27381513|ref|NP_773042.1| nitrilase [Bradyrhizobium japonicum USDA 110] gi|27354681|dbj|BAC51667.1| nitrilase [Bradyrhizobium japonicum USDA 110] Length = 334 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 29/169 (17%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV----FK 59 K K+A+ Q PV D ++AKA EA G L+ F E++I GYP + + Sbjct: 5 KFKVAVVQAAPVFMDAPASVAKAIGFIAEAGAAGAKLLAFPEVWIPGYPWWLWLGTPAWG 64 Query: 60 KSFIQACSSAIDTLKSDTHD----------GGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 F+ + ++L++D D +V+GF D + L+ V I DAG I Sbjct: 65 MQFVPRYHA--NSLRADGPDILALCAAAAEAKINVVMGFSEIDGGTLYLSQVFISDAGEI 122 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICED 152 I R K+ P H +RT D FR + RLG L C + Sbjct: 123 IFKRRKLK-PT----HVERTLYG--EGDGSDFRVVESSVGRLGALCCAE 164 >gi|21219043|ref|NP_624822.1| NAD synthetase [Streptomyces coelicolor A3(2)] gi|25090807|sp|Q9RJM5|NADE_STRCO RecName: Full=NH(3)-dependent NAD(+) synthetase gi|6066622|emb|CAB58266.1| NH(3)-dependent NAD(+)synthetase [Streptomyces coelicolor A3(2)] Length = 276 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 36/242 (14%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVD---ALGKENVQTIM-LPYKYT 331 V L + + +++G+SGG+DS LC +AV+ A G E + M LP+ Sbjct: 33 VAFLAERLTSTGLRALVLGISGGVDSTTAGRLCQ-LAVERARAAGHEALFYAMRLPHGV- 90 Query: 332 SPQSLEDAAACAKALGCKYDVLPI------HDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 Q+ ED A A + VL + ++ + F V NI++R Sbjct: 91 --QADEDDAQQALSFIRPDRVLTVDIKPASDAALDALLAADVAFRDPHHQDFVHGNIKAR 148 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R A++ +++ T + +E G+ T +GD + PL L K R Sbjct: 149 QRMIAQYAVAGAHGGLVVGTDHAAEAVSGFFTKFGDGAADVVPLTGLTK---------RR 199 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIKRIVENEE 501 + LG P +++ K P+A+L P + D+++L Y +DD ++ E+ Sbjct: 200 VRAVGDALG-----APAALVRKVPTADLETLDPGKADEDALGVTYEEIDDFLEGKPVTEQ 254 Query: 502 SF 503 F Sbjct: 255 VF 256 >gi|40890309|gb|AAR97499.1| nitrilase [uncultured organism] Length = 353 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 23/165 (13%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------PEDLV 57 KLK+A Q P D+ +I K R +EA G LI F E +I GYP Sbjct: 7 KLKVAAVQAAPAFLDLDASIEKTIRYVDEAAAAGAKLIAFPETWIPGYPWWIWLGAPAWA 66 Query: 58 FKKSFI--------QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNI 108 + F+ Q S + L+ I +G +D + + +I G Sbjct: 67 IMRGFVSRYFDNSLQYGSPEAERLRDAARRNKIYIALGLSERDGGSLYIAQWIIGPGGET 126 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILIC 150 +A R K+ H +RT + D+ RLG L C Sbjct: 127 VAQRRKLK-----PTHAERTVFGEGDGSHLAVHDLDIGRLGALCC 166 >gi|27366633|ref|NP_762160.1| putative amidohydrolase [Vibrio vulnificus CMCP6] gi|27358199|gb|AAO07150.1|AE016808_170 Predicted amidohydrolase [Vibrio vulnificus CMCP6] Length = 248 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 47/229 (20%), Positives = 100/229 (43%), Gaps = 13/229 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + I++AQ+ V GD+ N+A+ E + D+++F EL ++GY DL + Sbjct: 1 MNAAITISLAQIPVVRGDLPSNLAQHIYMIERSAEHDADVVVFPELSLTGYEL-DLANEL 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD-KINLPN 119 + + S I +L + + ++ G P + + ++ G +I D ++ + Sbjct: 60 ALLPEAES-IQSLSQASVEHHVIVIAGCPLRHDDAAKPTI-----GAVICFPDGRVEYYD 113 Query: 120 YSEFHEKRT-FISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 HE F S S+D + ++ ++ + IC D + ++ + K GA+ L ++ Sbjct: 114 KQYLHEGEAQFCSSGSSDYVFNVKEQQIALAICAD-FTHAEHAQRAKALGADLY--LVSA 170 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 N + +I++ S P++ N + + G S ++ Q Sbjct: 171 LISENGYETDAKILSDIASEHAFPVLLSNHISPTGGWVTCGKSSIWNAQ 219 >gi|149190688|ref|ZP_01868955.1| hydrolase, carbon-nitrogen family protein [Vibrio shilonii AK1] gi|148835454|gb|EDL52424.1| hydrolase, carbon-nitrogen family protein [Vibrio shilonii AK1] Length = 258 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 33/164 (20%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP----------- 53 +K A+ Q P+ N + +RA EA R G D+++ E +SGYPP Sbjct: 1 MKFALLQF-PISAQSTKNHEQIKRAIFEAKRDGADVLVTQECALSGYPPIEIGAVADIDF 59 Query: 54 --EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAV 111 +D VF S ID +K + +G R+ + NSV I+ + Sbjct: 60 ELQDAVF--------SQIIDLVKHTQ----ITVFLGLIRKFGDKAANSVAIIKPSGEVYY 107 Query: 112 RDKINLPNY--SEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 DK L + F + F N + + I++G+ IC +I Sbjct: 108 YDKRALWGWDAENFEVENDF-----NGVVDIQGIKVGVRICYEI 146 >gi|320158522|ref|YP_004190900.1| putative amidohydrolase [Vibrio vulnificus MO6-24/O] gi|319933834|gb|ADV88697.1| predicted amidohydrolase [Vibrio vulnificus MO6-24/O] Length = 248 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 45/211 (21%), Positives = 94/211 (44%), Gaps = 13/211 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + I++AQ+ V GD+ N+A+ E + D+++F EL ++GY DL + Sbjct: 1 MNAAITISLAQIPVVRGDLPSNLAQHIYMIERSAEHDADVVVFPELSLTGYEL-DLANEL 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD-KINLPN 119 + + S I L + + ++ G P + + ++ G +I D ++ L + Sbjct: 60 ALLPEAES-IQLLSQASAEHHVIVIAGCPLRHDDAAKPTI-----GAVICFPDGRVELYD 113 Query: 120 YSEFHEKRT-FISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 HE F S S+D + ++ ++ + IC D + ++ + K GA+ L ++ Sbjct: 114 KQYLHEGEAQFCSSGSSDYVFNVKEQQIALAICAD-FTHAEHAQRAKALGADLY--LVSA 170 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQV 208 N + +I++ S P++ N + Sbjct: 171 LISKNGYETDAKILSDIASEHAFPVLLSNHI 201 >gi|257421794|ref|ZP_05598784.1| NH(3)-dependent NAD+ synthetase [Enterococcus faecalis X98] gi|257163618|gb|EEU93578.1| NH(3)-dependent NAD+ synthetase [Enterococcus faecalis X98] gi|315032755|gb|EFT44687.1| NAD+ synthetase [Enterococcus faecalis TX0017] gi|315143746|gb|EFT87762.1| NAD+ synthetase [Enterococcus faecalis TX2141] gi|315155504|gb|EFT99520.1| NAD+ synthetase [Enterococcus faecalis TX0043] Length = 275 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAAIAVDALGKENVQT-- 323 +P + + + + L+ Y+ K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 LPTIDPKEEVRKSIDFLKAYLTKHPFLKNFVLGISGGQDSTLAGRLAQLAMTEMREETGD 74 Query: 324 -------IMLPYKYTSPQSLEDA--AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 I LPY + ++ A A + + D+ P D + SL + +Q Sbjct: 75 MSYQFIAIRLPYGEQADEADAQAALAFIQPDVSLRVDIKPAVDAM--VGSLENAGVQ--I 130 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 S N+++R R A++ + ++ T + +E + T YGD PL L K Sbjct: 131 SDFNKGNMKARQRMITQYAVAGENAGAVIGTDHAAENVTAFFTKYGDGGADILPLFRLNK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P ++ K P+A+L +P D+ +L Y +D Sbjct: 191 ---------RQGKALLKELGA-----PEALYLKIPTADLEDDKPLVADEVALGVTYDAID 236 Query: 491 DII--KRIVENEESFINN 506 D + K++ E ++ I N Sbjct: 237 DYLEGKKVSETDQQTIEN 254 >gi|138895516|ref|YP_001125969.1| hypothetical protein GTNG_1864 [Geobacillus thermodenitrificans NG80-2] gi|134267029|gb|ABO67224.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] Length = 274 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++ SGG+DS A+A +ALG + V + + + ++ A A+ +G K+ + Sbjct: 22 VLVAFSGGVDSTFLLAMAKEALG-DQVLAVTAVSETFPVREVQHATKLAEQIGVKHIKIQ 80 Query: 355 IHDLVNHFF 363 IH+L N F Sbjct: 81 IHELENEDF 89 >gi|222100468|ref|YP_002535036.1| ExsB family protein [Thermotoga neapolitana DSM 4359] gi|221572858|gb|ACM23670.1| ExsB family protein [Thermotoga neapolitana DSM 4359] Length = 314 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY-KYTSPQSLEDAAACAKALGCKYDV 352 K+ + SGG DS+L A +A ALG+E V+ + + + YT +S + + A+ G K+ Sbjct: 16 KLYVAFSGGKDSSLVAILAKMALGEERVELVTVDWGPYTYEKSRKIVRSFAEKYGLKHTF 75 Query: 353 LPIHDL 358 +P + L Sbjct: 76 IPSNGL 81 >gi|325959608|ref|YP_004291074.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanobacterium sp. AL-21] gi|325331040|gb|ADZ10102.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Methanobacterium sp. AL-21] Length = 280 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 16/198 (8%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K +IA+ Q+N VV N+ +A EAN G L++ E+F Y + V + + Sbjct: 6 KSFEIALCQMN-VVESKDENLERAVSMIREANVNGATLVVLPEMFNCPYDNDKFV-EYAE 63 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVIL-DAGNIIAVRDKINLPNY 120 + S ++ + + +V G P + + NS + D G ++ V KI+L + Sbjct: 64 NRKTSKSLKAISRAADENNVYVVAGSIPEESCGNIYNSSFVFDDRGEVLDVHRKIHLFDV 123 Query: 121 S-----EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL---- 171 F E T G + ++ G+ IC D+ + + + + +GA+ + Sbjct: 124 EVSDGISFKESNTITPGDKVTVVETPFMKFGVAICFDL-RFPELFRLMAMEGAKLVVVPG 182 Query: 172 -FSLNASP-YYHNKLKKR 187 F++ P ++ ++ R Sbjct: 183 AFNMTTGPAHWETTIRTR 200 >gi|262306095|gb|ACY45640.1| gln amidotransferase [Polyxenus fasciculatus] Length = 196 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 21/156 (13%) Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 CV +++ V K+ KV++ +SGG+DSA+CAA+ AL ++ V + + + +D Sbjct: 33 CVNYIQETVGKS---KVLMLVSGGVDSAVCAALLHKALSEDQVIAVHIDNGFMRKDESKD 89 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI------------QSRI 386 + G K + H F+ + P+ + + RI Sbjct: 90 VCVSLQKNGLKVKAVN----ARHQFTSAQTTIVANPAHPTYRTVTDPLCRVLDPEHKRRI 145 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 G+ + ++N + A L S SE+ +G GTL D+ Sbjct: 146 IGDTFIKIANDTIAELNLKS--SEVFLGQGTLRPDL 179 >gi|262306071|gb|ACY45628.1| gln amidotransferase [Loxothylacus texanus] Length = 197 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%) Query: 285 DYVQK-NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 DY++ HKV++ +SGG+DS +CAA+ ALG + V T+ Sbjct: 35 DYIRSATGDHKVLLLVSGGVDSTVCAALLHKALGSDRVITL 75 >gi|121700454|ref|XP_001268492.1| cyanide hydratase/nitrilase, putative [Aspergillus clavatus NRRL 1] gi|119396634|gb|EAW07066.1| cyanide hydratase/nitrilase, putative [Aspergillus clavatus NRRL 1] Length = 372 Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 25/175 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP-------- 52 +LKK K A P D+ ++ + +EA + G LI F EL+I GYP Sbjct: 4 VLKKYKAAAVNAEPGWFDLEESVRRTIHWIDEAGKAGCKLIAFPELWIPGYPYWAWKVTY 63 Query: 53 ----PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNS-VVILDAGN 107 P ++++ + + S + ++ + +G+ D + + V+I G+ Sbjct: 64 QESLPLLKKYRENSLASNSEEMRRIREAARANKIWVSLGYSELDLASLYTTQVLISPTGD 123 Query: 108 IIAVRDKINLPNYSEFHEKRTFI---SGYSNDPIVFRDI-RLGILICEDIWKNSN 158 ++ R KI H +R +G + + + +I R+G L C W+N N Sbjct: 124 VLNHRRKIR-----ATHVERLIFGDGTGDTTESVTQTEIGRVGHLNC---WENMN 170 >gi|74193453|dbj|BAE20667.1| unnamed protein product [Mus musculus] Length = 682 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ R+ +K KV++ LSGG+DS +C A+ Sbjct: 194 NFLYDIAGCSGNFTVQNRELE---CI---REIKEKVGTSKVLVLLSGGVDSTVCTALLNR 247 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 248 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 286 >gi|301780780|ref|XP_002925806.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Ailuropoda melanoleuca] Length = 699 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 211 NFLYDIAGCSGTFTVQNREIE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 264 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 265 ALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 303 >gi|40890097|gb|AAR97393.1| nitrilase [uncultured organism] Length = 345 Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust. Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 22/172 (12%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP--------- 52 + K+ A Q +PV+ AG + K + +QG++L +F E + YP Sbjct: 1 MNKVVAAAVQCSPVLYSCAGTVNKICEWIADLGKQGVELAVFAETLVPYYPYFSFIQAPC 60 Query: 53 ---PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN-I 108 + L+ + ++ S + + + VG +D + N+ ++ DAG + Sbjct: 61 AMGAQHLLLMQESVEVPSIYTQQIAAAAKAAKMVVSVGINERDGGSIYNAQLLFDAGGQL 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKNSN 158 + R KI FHE+ + G + R+G L C W++ N Sbjct: 121 VQHRRKIT----PTFHERMVWGQGDGSGLCAVDTAVGRVGSLAC---WEHYN 165 >gi|42526204|ref|NP_971302.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Treponema denticola ATCC 35405] gi|81570437|sp|Q73PV6|MNMA_TREDE RecName: Full=tRNA-specific 2-thiouridylase mnmA gi|41816316|gb|AAS11183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Treponema denticola ATCC 35405] Length = 366 Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 10/86 (11%) Query: 294 KVIIGLSGGIDSALCAAIAVD-ALGKENVQTIMLP-----YKYTSPQSLEDAAACAKALG 347 KV++GLSGG+DSA+ A + +D V +LP YK + +EDA A LG Sbjct: 2 KVLVGLSGGVDSAVAAKLLIDQGYDVTGVTMQLLPKLSGIYKEQT-DDIEDAKKVADKLG 60 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEE 373 K+ V +D+ F + + + EE Sbjct: 61 IKHIV---YDMRETFKTEIIDYFVEE 83 >gi|256789944|ref|ZP_05528375.1| NAD synthetase [Streptomyces lividans TK24] gi|289773826|ref|ZP_06533204.1| NAD+ synthetase [Streptomyces lividans TK24] gi|289704025|gb|EFD71454.1| NAD+ synthetase [Streptomyces lividans TK24] Length = 276 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 36/242 (14%) Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSA----LCAAIAVD---ALGKENVQTIM-LPYKYT 331 V L + + +++G+SGG+DS LC +AV+ A G E + M LP+ Sbjct: 33 VAFLAERLTSTGLRALVLGISGGVDSTTAGRLCQ-LAVERARAAGHEALFYAMRLPHGV- 90 Query: 332 SPQSLEDAAACAKALGCKYDVLPI------HDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 Q+ ED A A + VL + ++ + F V NI++R Sbjct: 91 --QADEDDAQQALSFIRPDRVLTVDIKPASDAALDALLAADVAFRDPHHQDFVHGNIKAR 148 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 R A++ +++ T + +E G+ T +GD + PL L K R Sbjct: 149 QRMIAQYAVAGAHGGLVVGTDHAAEAVSGFFTKFGDGAADVVPLTGLTK---------RR 199 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELR---PHQTDQESLP-PYPILDDIIKRIVENEE 501 + LG P +++ K P+A+L P + D+++L Y +DD ++ E+ Sbjct: 200 VRAVGDALG-----APAALVRKVPTADLETLDPGKADEDALGVTYEEIDDFLEGKPVTEQ 254 Query: 502 SF 503 F Sbjct: 255 VF 256 >gi|251795808|ref|YP_003010539.1| PP-loop domain protein [Paenibacillus sp. JDR-2] gi|247543434|gb|ACT00453.1| PP-loop domain protein [Paenibacillus sp. JDR-2] Length = 267 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 32/64 (50%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++ SGG+DS AV+ LG NV + + LE+A AK + +++V+ Sbjct: 19 VVVAFSGGVDSTFLLKAAVETLGTGNVLAVTADSETYPTSELEEAKKLAKQIRVQHEVIS 78 Query: 355 IHDL 358 +L Sbjct: 79 TSEL 82 >gi|310639704|ref|YP_003944462.1| asparagine synthetase [glutamine-hydrolyzing] 2 [Paenibacillus polymyxa SC2] gi|309244654|gb|ADO54221.1| Asparagine synthetase [glutamine-hydrolyzing] 2 [Paenibacillus polymyxa SC2] Length = 744 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 14/117 (11%) Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEA-DYNACVLSLRDYVQKNNFHKVIIGL--SGGIDS 305 +Q+ W+ +++++ S + L ++E +Y A +L D VQK V IGL SGGIDS Sbjct: 224 KQIRYWDLLANNNQS--FAELSDQEIINYYANLL--EDSVQKCLQSDVEIGLFLSGGIDS 279 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 A AAI + ++N+ T + S +L + A + KY LP H ++ H+ Sbjct: 280 ASIAAITSE---RQNIHT----FSVLSQSTLTNEDAKYAHITAKYLGLPNHQVLFHW 329 >gi|293606832|ref|ZP_06689183.1| NH(3)-dependent NAD(+) synthetase [Achromobacter piechaudii ATCC 43553] gi|292814836|gb|EFF73966.1| NH(3)-dependent NAD(+) synthetase [Achromobacter piechaudii ATCC 43553] Length = 171 Score = 38.1 bits (87), Expect = 4.5, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 24/163 (14%) Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQ---------TIMLPYKYTSPQSLEDAAACAKAL 346 ++G+SGG+DS + A +A L E ++ + LPY D A A+AL Sbjct: 1 MLGISGGVDSTVAARMA--QLAAERLRLAGKRAFFVAVRLPYGQQ-----HDEADAARAL 53 Query: 347 G-------CKYDVLPIHDLVNHFFSLMSQFLQEEPS-GIVAENIQSRIRGNILMALSNHS 398 + D+ P D ++ + V NI++R R A++ Sbjct: 54 DFIQADHVMQVDIQPAVDAQRDALEAAGLLFSDKSAEDFVVGNIKARQRMVAQYAIAGAM 113 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +++ T +E +G+ T +GD + PL+ L K +V L Sbjct: 114 DCLVIGTDQAAEALMGFFTKHGDGAADLLPLRGLTKRRVRALG 156 >gi|227519691|ref|ZP_03949740.1| NAD synthetase [Enterococcus faecalis TX0104] gi|257416811|ref|ZP_05593805.1| NAD+ synthase [Enterococcus faecalis AR01/DG] gi|227072915|gb|EEI10878.1| NAD synthetase [Enterococcus faecalis TX0104] gi|257158639|gb|EEU88599.1| NAD+ synthase [Enterococcus faecalis ARO1/DG] Length = 275 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT-- 323 +P + + + + L+ Y+ K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 LPTIDPKEEVRKSIDFLKAYLTKHPFLKTFVLGISGGQDSTLAGRLAQLAMTEMREETGD 74 Query: 324 -------IMLPYKYTSPQSLEDA--AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 I LPY + ++ A A + + D+ P D + SL + +Q Sbjct: 75 MSYQFIAIRLPYGEQADEADAQAALAFIQPDVSLRVDIKPAVDAM--VGSLENAGVQ--I 130 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 S N+++R R A++ + ++ T + +E + T YGD PL L K Sbjct: 131 SDFNKGNMKARQRMITQYAVAGENAGAVIGTDHAAENVTAFFTKYGDGGADILPLFRLNK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P ++ K P+A+L +P D+ +L Y +D Sbjct: 191 ---------RQGKALLKELGA-----PEALYLKIPTADLEDDKPLVADEVALGVTYDAID 236 Query: 491 DII--KRIVENEESFINN 506 D + K++ E ++ I N Sbjct: 237 DYLEGKKVSEADQQTIEN 254 >gi|159029205|emb|CAO87565.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 269 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K +I SGG+DS L A +A D LG + + I P+ L++A A A +G ++++ Sbjct: 20 EKALIAYSGGVDSTLVAKVAYDLLGGQAL-AITAVSPSLLPEELQEAIAQADYIGIRHEL 78 Query: 353 LPIHDLVNHFFS 364 + ++ N ++ Sbjct: 79 VETEEMNNPNYT 90 >gi|113953824|ref|YP_729973.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. CC9311] gi|123327918|sp|Q0IC49|MNMA_SYNS3 RecName: Full=tRNA-specific 2-thiouridylase mnmA gi|113881175|gb|ABI46133.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. CC9311] Length = 391 Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDA 339 +L Q H+V +GLSGG+DS+L AA+ V+A + T+ L + L DA Sbjct: 19 ALERLRQWPGEHRVAVGLSGGVDSSLTAALMVEAGWEVEGLTLWLMSGKGACCAEGLVDA 78 Query: 340 AACAKALGCKYDVLPIHD 357 A + LG + V+ D Sbjct: 79 AGICQQLGVPHHVVDSRD 96 >gi|116754005|ref|YP_843123.1| PP-loop domain-containing protein [Methanosaeta thermophila PT] gi|116665456|gb|ABK14483.1| PP-loop domain protein [Methanosaeta thermophila PT] Length = 282 Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 +++ SGG+DS+L AAI+ D LG V ++L + LE A + A+ LG + ++ Sbjct: 21 MLVSFSGGVDSSLLAAISRDVLGDGAV-AVILDSPLMPRRELEHATSVAQLLGIRC-IVA 78 Query: 355 IHDL 358 +HD+ Sbjct: 79 VHDV 82 >gi|295110441|emb|CBL24394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Ruminococcus obeum A2-162] Length = 373 Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 12/86 (13%) Query: 294 KVIIGLSGGIDSALCAAIAV----DALGK-----ENVQTIMLPYK-YTSPQSLEDAAACA 343 K +I +SGG+DS++ A + V D G +N Q ++ +P EDA + A Sbjct: 4 KAMIAMSGGVDSSVAAYLMVQNGYDCAGATLKLYDNPQCSFPGHRACCTPSDTEDARSVA 63 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQF 369 LG Y V P+HD H S++ +F Sbjct: 64 ARLGMLYYVFPMHDEFRH--SVIDKF 87 >gi|196007190|ref|XP_002113461.1| hypothetical protein TRIADDRAFT_26341 [Trichoplax adhaerens] gi|190583865|gb|EDV23935.1| hypothetical protein TRIADDRAFT_26341 [Trichoplax adhaerens] Length = 667 Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 34/66 (51%) Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 QK K ++ +SGG+DSA+CAA+ ALG + V + + + +D + +G Sbjct: 209 QKVRDKKALVLVSGGVDSAVCAALLHKALGSDRVIALHIDNGFMRKNESDDVKISLRKIG 268 Query: 348 CKYDVL 353 ++L Sbjct: 269 LDIEIL 274 >gi|154173946|ref|YP_001408829.1| hypothetical protein CCV52592_1718 [Campylobacter curvus 525.92] gi|112803690|gb|EAU01034.1| conserved hypothetical protein [Campylobacter curvus 525.92] Length = 257 Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 L++ ++K F + + SGG+DS+L A +A D LG++ V I + Y S + +++A Sbjct: 7 LKNDIKK--FGNLAVAFSGGVDSSLLAKLANDVLGEKAV-AITIKSPYMSAREIDEAVEF 63 Query: 343 AKALGCKYDVLPI 355 K K+++L + Sbjct: 64 CKIYNIKHEILEL 76 >gi|171703051|dbj|BAG16386.1| NAD synthase [Candidatus Phytoplasma japonicum] Length = 111 Score = 37.7 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + I + NP + +A + A E +LF EL +S Y DL F+ Sbjct: 1 MYRNGSIKVQLSNPNL-KVANPLTNAYNINEVLRESKASFVLFPELCLSSYTAGDLFFET 59 Query: 61 SFIQACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAV 111 +F+ A++ LK++T +G ++G P E + N VI+ I+ + Sbjct: 60 TFLNENFEALNWLLKNNTFEG--VFILGMPLALHEVLFNVAVIIQKDKILGI 109 >gi|154706592|ref|YP_001424777.1| GMP synthase [Coxiella burnetii Dugway 5J108-111] gi|226738431|sp|A9KGD5|GUAA_COXBN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|154355878|gb|ABS77340.1| GMP synthase (glutamine-hydrolyzing) [Coxiella burnetii Dugway 5J108-111] Length = 524 Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 S+RD +K +VI+GLSGG+DSA+ A + A+G + V ++ Sbjct: 217 SIRDIQEKVGKEQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLV 260 >gi|164688047|ref|ZP_02212075.1| hypothetical protein CLOBAR_01692 [Clostridium bartlettii DSM 16795] gi|164602460|gb|EDQ95925.1| hypothetical protein CLOBAR_01692 [Clostridium bartlettii DSM 16795] Length = 265 Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV+I SGG+DS +A D LG +N + + S + +++A K G K++V+ Sbjct: 19 KVVIAYSGGVDSNFLLKVASDELG-QNAIAVTIHAMMHSDREMDEAKEYTKQFGVKHEVI 77 Query: 354 PI 355 + Sbjct: 78 KV 79 >gi|161831532|ref|YP_001597186.1| GMP synthase [Coxiella burnetii RSA 331] gi|226738432|sp|A9N8L6|GUAA_COXBR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|161763399|gb|ABX79041.1| GMP synthase [Coxiella burnetii RSA 331] Length = 524 Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 S+RD +K +VI+GLSGG+DSA+ A + A+G + V ++ Sbjct: 217 SIRDIQEKVGKEQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLV 260 >gi|315149994|gb|EFT94010.1| NAD+ synthetase [Enterococcus faecalis TX0012] Length = 275 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT-- 323 +P + + + + L+ Y+ K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 LPTIDPKEEVRKSIDFLKAYLIKHPFLKTFVLGISGGQDSTLAGRLAQLAMTEMREETGD 74 Query: 324 -------IMLPYKYTSPQSLEDA--AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 I LPY + ++ A A + + D+ P D + SL + +Q Sbjct: 75 MSYQFIAIRLPYGEQADEADAQAALAFIQPDVSLRVDIKPAVDAM--IGSLENAGVQ--I 130 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 S N+++R R A++ + ++ T + +E + T YGD PL L K Sbjct: 131 SDFNKGNMKARQRMITQYAVAGENAGAVIGTDHAAENVTAFFTKYGDGGADILPLFRLNK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P ++ K P+A+L +P D+ +L Y +D Sbjct: 191 ---------RQGKALLKELGA-----PEALYLKIPTADLEDDKPLVADEVALGVTYDAID 236 Query: 491 DII--KRIVENEESFINN 506 D + K++ E ++ I N Sbjct: 237 DYLEGKKVSETDQQTIEN 254 >gi|150015449|ref|YP_001307703.1| ExsB family protein [Clostridium beijerinckii NCIMB 8052] gi|149901914|gb|ABR32747.1| ExsB family protein [Clostridium beijerinckii NCIMB 8052] Length = 274 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV++ SGG+DS +A +ALG +NV+ + + Y + +A + LG +++++ Sbjct: 19 KVVLAFSGGVDSTFLLRVAKEALG-DNVKAVTILSPYIPKWEIAEARELVRELGVQHEII 77 Query: 354 --PIHD 357 PI D Sbjct: 78 EAPIID 83 >gi|161527848|ref|YP_001581674.1| ExsB family protein [Nitrosopumilus maritimus SCM1] gi|160339149|gb|ABX12236.1| ExsB family protein [Nitrosopumilus maritimus SCM1] Length = 265 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 +KV+I LSGG+DSAL A A LG + + YK S + L+ A +G Sbjct: 15 NKVMIALSGGVDSALVAYAAYQKLGDFAI-AVTADYKTLSEEELQTAKQICSEIGITQFF 73 Query: 353 LPIHDLVNHFFS 364 L +L N F+ Sbjct: 74 LDYDELENEEFT 85 >gi|157165563|ref|YP_001466326.1| hypothetical protein CCC13826_1003 [Campylobacter concisus 13826] gi|112800843|gb|EAT98187.1| conserved hypothetical protein [Campylobacter concisus 13826] Length = 257 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Query: 287 VQKNNFHKV---IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 + KN+ K+ + SGG+DS+L +A D LG EN + + Y S + +++A Sbjct: 6 ILKNDIKKLGNLAVAFSGGVDSSLLLKVAADVLG-ENALALTVKSPYMSLREIDEAVEFT 64 Query: 344 KALGCKYDVLPI 355 K G ++++ + Sbjct: 65 KFYGIRHEIFEV 76 >gi|212212279|ref|YP_002303215.1| GMP synthase [Coxiella burnetii CbuG_Q212] gi|226738430|sp|B6IZE2|GUAA_COXB2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|212010689|gb|ACJ18070.1| GMP synthase (glutamine-hydrolyzing) [Coxiella burnetii CbuG_Q212] Length = 524 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 S+RD +K +VI+GLSGG+DSA+ A + A+G + V ++ Sbjct: 217 SIRDIQEKVGKEQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLV 260 >gi|149641234|ref|XP_001512299.1| PREDICTED: similar to guanosine 5-monophosphate synthetase, partial [Ornithorhynchus anatinus] Length = 631 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ R+ ++ KV++ LSGG+DS +C A+ Sbjct: 143 NFLYDIAGCSGTFTVQNRELE---CI---REIKERAGTSKVLVLLSGGVDSTVCTALLNR 196 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 197 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIRVKVV 235 >gi|29654638|ref|NP_820330.1| GMP synthase [Coxiella burnetii RSA 493] gi|44887951|sp|Q83BZ6|GUAA_COXBU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|29541906|gb|AAO90844.1| GMP synthase (glutamine-hydrolyzing) [Coxiella burnetii RSA 493] Length = 524 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 S+RD +K +VI+GLSGG+DSA+ A + A+G + V ++ Sbjct: 217 SIRDIQEKVGKEQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLV 260 >gi|94039545|dbj|BAE93547.1| NAD synthase [Potato purple top phytpolasma] Length = 112 Score = 37.7 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +A VG+ N A + + +LF EL +S Y DL F+ +F++ Sbjct: 7 IKIELASPPLTVGNPLKN---AYSMQNVLKKSKASFVLFPELCLSSYTAGDLFFETTFLE 63 Query: 65 ACSSAID-TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 A+D LK+++ +G ++G P E + N VI+ I+ + K Sbjct: 64 QNFQALDWLLKNNSFEG--VYILGMPLALHEVLFNVAVIIQKDKILGITPK 112 >gi|74212049|dbj|BAE40189.1| unnamed protein product [Mus musculus] Length = 693 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ R+ +K KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGNFTVQNRELE---CI---REIKEKVGTSKVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 259 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|240103662|ref|YP_002959971.1| Carbon-nitrogen hydrolase [Thermococcus gammatolerans EJ3] gi|239911216|gb|ACS34107.1| Carbon-nitrogen hydrolase [Thermococcus gammatolerans EJ3] Length = 223 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 13/177 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ + VG+ N + R EA D ++F E ++G+ D S Sbjct: 1 MKVALIPMRVEVGNFETNWREFERRFNEALMDEPDFVVFPEYCLTGFEEWDF----SGAG 56 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + G +V G + V NS +++ R+ L + +F Sbjct: 57 LYDEILGRVTQLAREAGVYVVFGLLEPYKNCVYNSALLIG-------RNGEVLLKHRKFQ 109 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF-SLNASPYY 180 E F +G + + I+IC D++ N I K ++++ +F+F + SP Y Sbjct: 110 EPMKFCTGNTVRTARTEFGKAAIIICGDLY-NKRIAKWVRRKRPDFIFVPMEYSPDY 165 >gi|33600531|ref|NP_888091.1| hypothetical protein BB1546 [Bordetella bronchiseptica RB50] gi|33568130|emb|CAE32043.1| Conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 276 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 31/263 (11%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF-K 59 M KIA Q + G+ N A++ +A G +LI+ E + G LVF Sbjct: 1 MTPTGKIAAIQFDVRQGENDANRARSCELARQAAAAGANLIVLPECCVGG-----LVFDS 55 Query: 60 KSFIQACSSAIDTLKSD-----THDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 + I+A S + + + + GA IV G D + N+ V++ + K Sbjct: 56 RDEIRAVSETVPGPSTRAWSQVSRETGAWIVAGLSETDGAKIYNTAVLVGPNGELHRHRK 115 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQGAEFL 171 +++ E+R F G D + D R+G+ IC D+W +C++ G + + Sbjct: 116 LHVRGI----EQRLFDVG---DALTCVDTPLGRIGLAICYDMW-FPEVCRNYALDGVDVV 167 Query: 172 FS--------LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 + A + L + + ++ L ++ ++VG + + F G S F Sbjct: 168 AAPANWSKSVRTADAFDAYGLPQGYHLMAATAVSNELVVVAADRVGTERGVAFLGTSCIF 227 Query: 224 D-GQQQLAFQMKHFSEQNFMTEW 245 + L EQ + +W Sbjct: 228 GPSGEALCPAASRGEEQILLADW 250 >gi|291526867|emb|CBK92453.1| Predicted amidohydrolase [Eubacterium rectale M104/1] Length = 256 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 7/150 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF-I 63 ++I Q + GD+ N + +A A + + L++F E ++GYPP D+ Sbjct: 1 MRIGAYQF-AISGDVNENYKEIEKAIYLAKHKDVQLLIFPECSLTGYPPRDISNSSCVNF 59 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 S D L+S +VG +++E + N ++ I DK L + Sbjct: 60 NLVQSMCDRLQSVADQNDISFIVGTIFKEKE-IYNRALLFQPNKQIKSYDKRALWGW--- 115 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDI 153 + F G S+ + + GI IC +I Sbjct: 116 -DNDNFAKGNSDGIVEIDGVVFGIRICFEI 144 >gi|284990262|ref|YP_003408816.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Geodermatophilus obscurus DSM 43160] gi|284063507|gb|ADB74445.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Geodermatophilus obscurus DSM 43160] Length = 265 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 32/164 (19%) Query: 71 DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTF 129 D + + + G I VG P + GV N+VV++D+ G+++A K +L Y + ++ F Sbjct: 67 DRVAAIAAEHGLAIAVGLPVRTPAGVANTVVVVDSDGSLLAGYAKAHL--YGDV-DRDAF 123 Query: 130 ISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA--SPYYHNKLK 185 + G + FR + +G+L+C D+ + H G E L PY Sbjct: 124 VPGDVGV-VQFRLDGVVVGLLVCYDVEFPEAVRAH-ALAGTELLVVPTGLMDPY------ 175 Query: 186 KRHEIVTGQISHVHLP---------IIYVNQVGGQDELIFDGAS 220 G + V +P + Y N+ G + + ++ GAS Sbjct: 176 -------GSVGTVLVPARAYESQVFVAYTNRTGVEGKFVYCGAS 212 >gi|182413197|ref|YP_001818263.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Opitutus terrae PB90-1] gi|177840411|gb|ACB74663.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Opitutus terrae PB90-1] Length = 247 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 12/145 (8%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP---EDLVFKKSFIQACSSAIDTL 73 GD++ NI RA A + G+ +++F EL ++GY P +L F + + + + L Sbjct: 16 GDVSKNIETHARAIRAAAQHGVRVLVFPELSLTGYEPTLAAELAFTRDDPRL--APLAEL 73 Query: 74 KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY 133 + H +VG P Q L +AV KI+L E H F G Sbjct: 74 AREHHLTA---IVGAPLAAQPVPHIGAFALSDAASVAVYAKIHLHPGEESH----FSPGS 126 Query: 134 SNDPIVFRDIRLGILICEDIWKNSN 158 + + + ++G+ IC D+ S+ Sbjct: 127 TPLVLPWDPHKIGVAICADLTHASH 151 >gi|110669532|ref|YP_659343.1| tRNA methyl transferase [Haloquadratum walsbyi DSM 16790] gi|109627279|emb|CAJ53769.1| tRNA methyl transferase [Haloquadratum walsbyi DSM 16790] Length = 371 Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++ SGG+DSA+ A +A DALG N + LEDA A +G + ++ Sbjct: 82 VLVAFSGGVDSAVVATLAYDALGS-NAIACTAKSETLPAAELEDAHQVAAEIGLPHKIVS 140 Query: 355 IHDLVNHFF 363 +L + F Sbjct: 141 FSELNDENF 149 >gi|322372388|ref|ZP_08046924.1| hydrolase, carbon-nitrogen family [Streptococcus sp. C150] gi|321277430|gb|EFX54499.1| hydrolase, carbon-nitrogen family [Streptococcus sp. C150] Length = 260 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 52/249 (20%), Positives = 101/249 (40%), Gaps = 23/249 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +KIA+ Q++ G A N+ + + A D+I+ E++ +GY ++L + K Sbjct: 1 MKIALVQMDVAHGQPAENVKHVKEMLKRALDDNPDVIVLPEMWNTGYALDELDGIADKDG 60 Query: 63 I--QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPN 119 + QA S + GG+ V + D+ N+ + + G++I K++L Sbjct: 61 LESQALLSHFAREHAVAILGGS---VAIEKDDK--FYNTTYVYNKFGDLINTYSKVHL-- 113 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI----WKNSNICKHLKKQGAEFLFSLN 175 + E + +G + +IC DI W + + QG + LF + Sbjct: 114 FGLMAEDQYMSAGAKESVFELDGVTAASVICYDIRFPEWVRTQMA-----QGVKVLFVVA 168 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 P ++++ ++ + ++ VN+VG E +F G S D + Q K Sbjct: 169 QWP--EPRVQQWEILLKARAVENQAFVVAVNRVGAGPEDVFSGHSMVIDPLGNVVLQAKE 226 Query: 236 FSEQNFMTE 244 E F + Sbjct: 227 HEEGIFTAD 235 >gi|261329284|emb|CBH12265.1| GMP synthase, putative [Trypanosoma brucei gambiense DAL972] Length = 658 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 KV+ SGG+DS +CA + + ALG E V I + + + ++ A +A G + Sbjct: 223 QKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHGFMRLNESQEVVAALRAAGVNVTL 282 Query: 353 LPIHDLVNHFFSLMSQF 369 + D F ++F Sbjct: 283 I---DATKQFSEATTEF 296 >gi|109048628|ref|XP_001105046.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 1 [Macaca mulatta] gi|297286583|ref|XP_002803006.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 2 [Macaca mulatta] Length = 693 Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 259 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|296166073|ref|ZP_06848519.1| asparagine synthase 1 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898568|gb|EFG78128.1| asparagine synthase 1 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 654 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIG--LSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 E+A Y+ L D V K+ V +G LSGGIDS AA+A+ N+ T ++ Sbjct: 257 EQARYDEITAVLEDSVAKHMRADVTVGAFLSGGIDSTAIAALAIRH--NPNLITFTTGFE 314 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIH 356 ++ A A A+A+G ++ +H Sbjct: 315 REGFSEIDVAVASAEAIGARHVAKVVH 341 >gi|72391078|ref|XP_845833.1| GMP synthase [Trypanosoma brucei TREU927] gi|62176460|gb|AAX70568.1| GMP synthase, putative [Trypanosoma brucei] gi|70802369|gb|AAZ12274.1| GMP synthase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 658 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 KV+ SGG+DS +CA + + ALG E V I + + + ++ A +A G + Sbjct: 223 QKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHGFMRLNESQEVVAALRAAGVNVTL 282 Query: 353 LPIHDLVNHFFSLMSQF 369 + D F ++F Sbjct: 283 I---DATKQFSEATTEF 296 >gi|85861218|ref|NP_001028472.2| GMP synthase [glutamine-hydrolyzing] [Mus musculus] gi|145558920|sp|Q3THK7|GUAA_MOUSE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|74139380|dbj|BAE40832.1| unnamed protein product [Mus musculus] gi|74146610|dbj|BAE41314.1| unnamed protein product [Mus musculus] gi|74226222|dbj|BAE25299.1| unnamed protein product [Mus musculus] gi|148703454|gb|EDL35401.1| mCG6377, isoform CRA_a [Mus musculus] gi|187952891|gb|AAI38412.1| Guanine monphosphate synthetase [Mus musculus] gi|187953909|gb|AAI38413.1| Guanine monphosphate synthetase [Mus musculus] Length = 693 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ R+ +K KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGNFTVQNRELE---CI---REIKEKVGTSKVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 259 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|237738505|ref|ZP_04568986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium mortiferum ATCC 9817] gi|229420385|gb|EEO35432.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium mortiferum ATCC 9817] Length = 357 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 29/198 (14%) Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y +KN K+ + +SGG+DS+ A I L K+ I + + +P+ EDA + Sbjct: 12 YDEKNKNIKIAVAMSGGVDSSTVAYI----LKKQGYDLIGITMRTCNPED-EDAKKVCED 66 Query: 346 LGCKYDVLPIHDLVNHFFS-LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + VL D F + +M F++E G N M + H K +L Sbjct: 67 LGIPHYVL---DATKEFKTKVMDYFIEEYLQGKTP---------NPCMVCNKHIKFGMLI 114 Query: 405 TSNKSE----ISVGYGTLYGD--MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +S+ ++ G+ T D +S G +P KD QV+ L S N + + P+ + Sbjct: 115 DFARSKGADFMATGHYTQLKDGVLSMGDDPNKD----QVYFL-SQINKENLKYLMFPIGD 169 Query: 459 VIPPSILEKSPSAELRPH 476 + P + E + +R + Sbjct: 170 LEKPKVRELAEQLGVRVY 187 >gi|149064654|gb|EDM14805.1| guanine monphosphate synthetase, isoform CRA_a [Rattus norvegicus] Length = 529 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + +R+ +K KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGNFTVQNRELE------CIREIKEKVGTSKVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 259 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|224061092|ref|XP_002187518.1| PREDICTED: guanine monphosphate synthetase [Taeniopygia guttata] Length = 693 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E C+ ++D V + KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGTFTVQNRELQ---CIQDIKDRVGSS---KVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + + + LG V+ Sbjct: 259 ALNREQVIAVHIDNGFMRKRESQAVEEALRKLGIHVKVV 297 >gi|326804082|ref|YP_004321900.1| TIGR00268 family protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650049|gb|AEA00232.1| TIGR00268 family protein [Aerococcus urinae ACS-120-V-Col10a] Length = 264 Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 37/65 (56%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +V + SGG+DS L +A LGKEN I++ S ++A A A+A+ + ++ Sbjct: 18 QVCVAFSGGVDSTLLLYLARKLLGKENTLAIIIQSDLVSEADDQEALALAQAMDVESQLI 77 Query: 354 PIHDL 358 P+++L Sbjct: 78 PVNEL 82 >gi|313619933|gb|EFR91487.1| carbon-nitrogen family hydrolase [Listeria innocua FSL S4-378] Length = 70 Score = 37.7 bits (86), Expect = 5.4, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 30/49 (61%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP 53 LK+A+ Q V D N+ + + + A+R+G DL+LF E++ +GY P Sbjct: 4 LKVALVQQQAVPNDKEANLNLSIQYIKAAHRKGADLVLFPEMWSNGYAP 52 >gi|238855389|ref|ZP_04645700.1| NAD+ synthetase [Lactobacillus jensenii 269-3] gi|260665370|ref|ZP_05866218.1| NAD+ synthetase [Lactobacillus jensenii SJ-7A-US] gi|282932100|ref|ZP_06337557.1| NAD+ synthetase [Lactobacillus jensenii 208-1] gi|313473065|ref|ZP_07813549.1| NAD+ synthetase [Lactobacillus jensenii 1153] gi|238831987|gb|EEQ24313.1| NAD+ synthetase [Lactobacillus jensenii 269-3] gi|239528709|gb|EEQ67710.1| NAD+ synthetase [Lactobacillus jensenii 1153] gi|260560874|gb|EEX26850.1| NAD+ synthetase [Lactobacillus jensenii SJ-7A-US] gi|281303779|gb|EFA95924.1| NAD+ synthetase [Lactobacillus jensenii 208-1] Length = 276 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 29/228 (12%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHK-VIIGLSGGIDSALCAA---IAVDALGKENVQ 322 +P + E + V L+DY++ + F K +++G+SGG DS L IA++ L +E Sbjct: 15 LPEIDPEKEIRRSVDFLKDYLKAHPFLKSLVLGISGGQDSTLTGKLCQIAIEELRQETGN 74 Query: 323 ------TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 + LPY + S A + V+ I D V+ + + Q + + Sbjct: 75 KDYKFIAVRLPYGVQNDASDAADAVAFQKPDVDL-VVNIKDAVDKTVASLEQ-AGVKITD 132 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 NI++R R + ++ ++ T + +E G+ T YGD + PL Sbjct: 133 FNKGNIKARQRMIVQYGIAGAYSGAVVGTDHAAENITGFYTKYGDGASDLVPL------- 185 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 F+L R + LG P + K+P+A+L + D LP Sbjct: 186 -FRLDK-RQGKALLKYLG-----CPEHLYLKAPTADL---EEDAPDLP 223 >gi|255565735|ref|XP_002523857.1| Nitrilase, putative [Ricinus communis] gi|223536945|gb|EEF38583.1| Nitrilase, putative [Ricinus communis] Length = 351 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP 52 ++ + Q + V D +AKA R EA G L++F E FI GYP Sbjct: 31 VRATVVQASTVFYDTPATLAKAERLLAEAAGYGSQLVVFPEAFIGGYP 78 >gi|253682565|ref|ZP_04863362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Clostridium botulinum D str. 1873] gi|253562277|gb|EES91729.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Clostridium botulinum D str. 1873] Length = 346 Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV IGLSGG+DS++ A + L ++ I + K + EDAA A+ L Y +L Sbjct: 4 KVAIGLSGGVDSSVAAYL----LKEKGYDLIGITMKVSDVDVSEDAAKIAQKLDIPYHIL 59 Query: 354 PIHD-LVNHFF-SLMSQFLQ 371 + D NH + ++LQ Sbjct: 60 DLRDEFKNHVIDNFAKEYLQ 79 >gi|332214514|ref|XP_003256381.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 2 [Nomascus leucogenys] Length = 594 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 106 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 159 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 160 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 198 >gi|330808748|ref|YP_004353210.1| hydrolase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376856|gb|AEA68206.1| putative hydrolase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 253 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 10/154 (6%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 A AQ + GD+ N+ + + + A QG+ L++F EL ++GY E + I Sbjct: 7 AAAQSISIAGDVRANLVRHQYFMQAAAEQGVQLLVFPELSLTGY--ERGLAADLAILPED 64 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINL-PNYSEFH 124 + L+ + G VVG P + VL ++L A + V K +L P Sbjct: 65 GVLQPLRDLARELGLTTVVGLPIRLSAAAPVLIGALVLGADGSLGVYSKQHLHPG----- 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 E+ F G+ + + + IC D +S+ Sbjct: 120 EEVAFAPGHGGSILAMGQDCIALAICADFCHSSH 153 >gi|319639271|ref|ZP_07994022.1| queuosine biosynthesis protein queC [Neisseria mucosa C102] gi|317399455|gb|EFV80125.1| queuosine biosynthesis protein queC [Neisseria mucosa C102] Length = 219 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 29/63 (46%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G ENVQ I Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGLENVQAITFQYGQRHAIELERARWIAQDLGVKQTV 63 Query: 353 LPI 355 L + Sbjct: 64 LDL 66 >gi|227432029|ref|ZP_03914047.1| NAD synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352214|gb|EEJ42422.1| NAD synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 273 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 56/267 (20%), Positives = 107/267 (40%), Gaps = 47/267 (17%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT------IMLPYKYTSPQSL 336 L+ + + + + I +SGG DS L I A+ + +T + + Y Q Sbjct: 31 LKQCLTHSAYTGLAIAVSGGQDSTLAGKIGQLAIAELRAETNQKFEFVAIRQPYGEQQDE 90 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN-----IQSRIRGNIL 391 DA + K D+ ++ + +L+ G+ ++ I+ ++R Sbjct: 91 NDAQDALNFI--KPDLTVTTNIKDATDALVGSL---RLGGLTVDDMSRGSIKPKVRMIAQ 145 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 A++ + ++ T + +E G+ T YGD NPL L K Q QL ++ Sbjct: 146 YAVAREHNSAVIGTDHAAEAVAGFFTKYGDGGTDINPLWRLNKRQGRQLLEALHA----- 200 Query: 452 GLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILDDIIKRIVENEESFINND 507 P + +K P+A+L RP D+ +L Y ++DD ++ + N D Sbjct: 201 ---------PKHLYDKVPTADLEDERPQLPDEVALGVRYDVIDDYLE-----GKDVANTD 246 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPV 534 E +E +Y + ++R P+ Sbjct: 247 AERIEE--------MYLTTQQKRHEPI 265 >gi|332214512|ref|XP_003256380.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 1 [Nomascus leucogenys] Length = 693 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGTFTVQNRELE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 259 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|260914428|ref|ZP_05920897.1| transcription regulator ExsB [Pasteurella dagmatis ATCC 43325] gi|260631529|gb|EEX49711.1| transcription regulator ExsB [Pasteurella dagmatis ATCC 43325] Length = 224 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 27/60 (45%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N K ++ SGG DS C A+ G ENV+ + Y LE A AK LG K Sbjct: 7 NGNRKAVVIFSGGQDSTTCLIQAIQEYGAENVEAVTFQYGQRHAIELEKAQWIAKDLGVK 66 >gi|115350687|ref|YP_772526.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia ambifaria AMMD] gi|115280675|gb|ABI86192.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia ambifaria AMMD] Length = 275 Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 18/149 (12%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPED-LVFKKSFIQACSSAIDTLKS 75 D+A N+A+A R EA G L+L E F G+ D L +++ + Sbjct: 23 DVARNLAEAGRLIAEAAGDGAQLVLLPEYFCFMGHRDTDKLALAETYRDGPIQQFLARAA 82 Query: 76 DTHDGGAGIVVG-FPRQDQEG--VLNSVVILD-AGNIIAVRDKINLPNYSE----FHEKR 127 H G ++ G P Q E VLN+ ++ D +G+ A DKI+L N+ + F E R Sbjct: 83 QRH--GVWLIGGTLPLQAPEPDRVLNTTLVFDPSGHEAARYDKIHLFNFEKGDESFDEAR 140 Query: 128 TFISGYSNDPIVFRDI---RLGILICEDI 153 T +G + +V D R+G+ +C D+ Sbjct: 141 TIRAG---ETVVTFDAPFGRVGLSVCYDL 166 >gi|317402156|gb|EFV82747.1| secreted protein [Achromobacter xylosoxidans C54] Length = 325 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 5/52 (9%) Query: 283 LRDYVQKNNFHKVIIGLSG-GIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 L DYV+KN KV + +G G S LC + V+ALG VQ + +PYK T+P Sbjct: 142 LADYVKKNK-DKVSLANAGIGAASHLCGTMLVEALG---VQLLTIPYKGTAP 189 >gi|323347288|gb|EGA81561.1| Nit3p [Saccharomyces cerevisiae Lalvin QA23] Length = 291 Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 15/165 (9%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMD--LILFTELFISGYPPEDLVFKK 60 +K+K+A+ QL+ D N+ +A E A ++ D L++ E F S Y + Sbjct: 9 QKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYS 68 Query: 61 SFI--QACSSAIDTLKSDTHDGGAGIVVG--FPRQD--QEGVLNSVVILDA-GNIIAVRD 113 I + S+++ L S+ + I+VG P D + + N+ +I + G +I Sbjct: 69 EVINPKEPSTSVQFL-SNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIXKHR 127 Query: 114 KINL-----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 K++L PN FHE T +G + I + + G+ IC D+ Sbjct: 128 KVHLFDVDIPNGISFHESETLSAGEKSTTIDTKYGKFGVGICYDM 172 >gi|307942327|ref|ZP_07657678.1| nitrilase, arylacetone-specific [Roseibium sp. TrichSKD4] gi|307774613|gb|EFO33823.1| nitrilase, arylacetone-specific [Roseibium sp. TrichSKD4] Length = 323 Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 34/173 (19%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A Q PV D G + K E+A +G+ L+ F E+++ GYP ++Q Sbjct: 2 VKVAAVQAAPVWMDAKGTLEKTLTIIEDAAGKGVQLVAFGEVWLPGYP------FTIWLQ 55 Query: 65 ACSSAIDT-----LKSDTHDGG-------------AGIVVGFPRQDQEGVLNSVVIL-DA 105 A A+D + + T DG +++GF +D+ + S ++ D Sbjct: 56 APMVAMDVVMKHRVNAITLDGPEMAAICEAARTNRMWVMMGFAERDRGSIYCSQALVDDR 115 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKN 156 G I+ R K+ P + E+ + G + D V ++G L C W+N Sbjct: 116 GEIVLSRRKLR-PTH---MERTVWGEGPATDIKVVDTPFGKVGGLCC---WEN 161 >gi|241759321|ref|ZP_04757427.1| ExsB protein [Neisseria flavescens SK114] gi|241320457|gb|EER56754.1| ExsB protein [Neisseria flavescens SK114] Length = 219 Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 29/63 (46%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C A+ G ENVQ I Y LE A A+ LG K V Sbjct: 4 QQALVIFSGGQDSTTCLIQAIQTYGCENVQAITFQYGQRHAIELEQARWIAQDLGVKQTV 63 Query: 353 LPI 355 L + Sbjct: 64 LDL 66 >gi|194476611|ref|YP_002048790.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase [Paulinella chromatophora] gi|171191618|gb|ACB42580.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase [Paulinella chromatophora] Length = 434 Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 11/122 (9%) Query: 251 LSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 L N + D++ +T+ + + E D LR N K+ +GLSGG+DS+L AA Sbjct: 9 LETLNSVQDNTTNTVGLNISENFEDL------LRKLKNAPNKQKIAVGLSGGVDSSLAAA 62 Query: 311 IAVDALGK-ENVQTIMLPYKYT-SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 + V A + E + ++ K T + L DA + L + ++ D HF + Sbjct: 63 LLVKAGWQVEGLTLWLMSGKGTCCSEGLLDAVGICEQLNIPHHIV---DSREHFQKQIVA 119 Query: 369 FL 370 FL Sbjct: 120 FL 121 >gi|157813138|gb|ABV81314.1| putative GMP synthetase [Mastigoproctus giganteus] Length = 196 Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 8/105 (7%) Query: 250 QLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDSALC 308 +L N++ D S + +Q E + C+ +Y++K KV++ +SGG+DS +C Sbjct: 7 KLMMKNFLYDVSGLSGTFTMQSREVE---CI----EYIKKTVGTSKVLMLVSGGVDSTVC 59 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AA+ AL ++ V I + + K LG K V+ Sbjct: 60 AALLHKALKEDQVIAIHIDNGFMRKNESLQVEQSLKQLGLKMKVI 104 >gi|147785804|emb|CAN62123.1| hypothetical protein VITISV_037576 [Vitis vinifera] Length = 317 Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 9/140 (6%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGY----PPEDLVFKKSFIQACSSAIDTL 73 D+ N+ A R +A+R+G ++IL ELF Y ED F+++ I + Sbjct: 19 DVPTNLNTAERLVRDAHRKGANIILIQELFEGYYFCQAQREDF-FQRAKPYKGHPTILRM 77 Query: 74 KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISG 132 + + G I V F + NS+ I+DA G + + K ++P+ + EK F G Sbjct: 78 QKLAKELGVVIPVSFFEEANNAHYNSIAIVDADGTDLGIYRKSHIPDGPGYQEKFYFNPG 137 Query: 133 YSNDPIV---FRDIRLGILI 149 + + F I +G+++ Sbjct: 138 DTGFKVFETKFAKIGVGLIV 157 >gi|15643726|ref|NP_228774.1| hypothetical protein TM0966 [Thermotoga maritima MSB8] gi|222100584|ref|YP_002535152.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359] gi|4981504|gb|AAD36045.1|AE001759_9 conserved hypothetical protein [Thermotoga maritima MSB8] gi|221572974|gb|ACM23786.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359] Length = 268 Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K+++ SGG+DS L A +A + LGK N + + + +E+A A +G +++ + Sbjct: 16 KLVVMFSGGVDSTLLAKLAREVLGK-NAVALTIDSPVIPRKEIEEAKNLANLIGIRHEFI 74 Query: 354 PIHDL 358 +++L Sbjct: 75 ELNEL 79 >gi|184154817|ref|YP_001843157.1| hypothetical protein LAF_0341 [Lactobacillus fermentum IFO 3956] gi|183226161|dbj|BAG26677.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] Length = 259 Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust. Identities = 46/230 (20%), Positives = 94/230 (40%), Gaps = 9/230 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI- 63 +++AI QL+ + N A+ +EA + G D+I+ E++ +GY + L Sbjct: 1 MRVAIDQLDVALARPDQNFAQVAADVKEAAKAGADVIVIPEMWNTGYALDQLGDLADLDG 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE 122 Q + L D G V R + N+ + D G ++ DK++L + Sbjct: 61 QRTKQTLARLARDNQINIVGGSVAIKRGKR--FYNTTYVYDRTGQLVGDYDKVHL--FGL 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 +E +G++ + ++ IC D+ + + + K G++ LF P Sbjct: 117 MNEGEFISAGHAPNRFALDGVKAASAICYDL-RFPEWLRTISKGGSQILFLPAQWPV--Q 173 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 ++ + ++ + ++ VN+VG F G S D ++ F+ Sbjct: 174 RIDQWRILLQARAIENQCFVVAVNRVGDDAANHFGGNSMVIDPLGKVLFE 223 >gi|74144707|dbj|BAE27334.1| unnamed protein product [Mus musculus] Length = 693 Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + +R+ +K KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGNFTVQNRELE------CIREIKEKVGTSKVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 259 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|67078508|ref|NP_001019925.1| GMP synthase [glutamine-hydrolyzing] [Rattus norvegicus] gi|81908630|sp|Q4V7C6|GUAA_RAT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|66910916|gb|AAH98016.1| Guanine monphosphate synthetase [Rattus norvegicus] Length = 693 Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + +R+ +K KV++ LSGG+DS +C A+ Sbjct: 205 NFLYDIAGCSGNFTVQNRELE------CIREIKEKVGTSKVLVLLSGGVDSTVCTALLNR 258 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 259 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297 >gi|307719550|ref|YP_003875082.1| hypothetical protein STHERM_c18740 [Spirochaeta thermophila DSM 6192] gi|306533275|gb|ADN02809.1| hypothetical protein STHERM_c18740 [Spirochaeta thermophila DSM 6192] Length = 292 Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 10/74 (13%) Query: 257 MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 M + + M + L E+EAD VL + ++ +G SGG+DS A +A + L Sbjct: 10 MLMNQGADMDLSLIEKEADRLVEVL--------KGYGRIAVGFSGGVDSTFLAVVAREVL 61 Query: 317 GKENVQ--TIMLPY 328 GK+ V+ T++ P+ Sbjct: 62 GKDAVRAYTLLPPH 75 >gi|281343173|gb|EFB18757.1| hypothetical protein PANDA_015366 [Ailuropoda melanoleuca] Length = 784 Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 296 NFLYDIAGCSGTFTVQNREIE---CIREIKERVGTS---KVLVLLSGGVDSTVCTALLNR 349 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 350 ALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 388 >gi|291614552|ref|YP_003524709.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sideroxydans lithotrophicus ES-1] gi|291584664|gb|ADE12322.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sideroxydans lithotrophicus ES-1] Length = 285 Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 2 LKKLKIAIAQL--NPVVGDIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVF 58 L K+A Q+ P + GN+++ARR +A QG L++ E F I G +D V Sbjct: 15 LNAFKVAAIQMASGP---KVEGNLSEARRLIAKAAEQGAKLVVLPEFFAIMGMNEQDKVK 71 Query: 59 KKSF-----IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVR 112 + IQ+ S + GG+ + + V NS+++ D G +A Sbjct: 72 VRELPGQGPIQSFLSEMARKHKIWLVGGS---IPLAANTPDKVRNSLLVFDETGAQVARY 128 Query: 113 DKINLPNYS----EFHEKRTFISGYSNDPIVFRDI---RLGILICEDI 153 DKI+L N + ++E +T G D +V D R+G+ IC D+ Sbjct: 129 DKIHLFNLTLGNESYNEAQTIEPG---DKVVVVDSPFGRIGLAICYDL 173 >gi|227828341|ref|YP_002830121.1| nitrilase/cyanide hydratase and apolipoproteinN-acyltransferase [Sulfolobus islandicus M.14.25] gi|227831099|ref|YP_002832879.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus L.S.2.15] gi|229579984|ref|YP_002838384.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus Y.G.57.14] gi|229585572|ref|YP_002844074.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus M.16.27] gi|238620534|ref|YP_002915360.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus M.16.4] gi|284998598|ref|YP_003420366.1| Nitrilase/cyanide hydratase or apolipoprotein N-acyltransferase [Sulfolobus islandicus L.D.8.5] gi|227457547|gb|ACP36234.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus L.S.2.15] gi|227460137|gb|ACP38823.1| Nitrilase/cyanide hydratase and apolipoproteinN-acyltransferase [Sulfolobus islandicus M.14.25] gi|228010700|gb|ACP46462.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus Y.G.57.14] gi|228020622|gb|ACP56029.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus M.16.27] gi|238381604|gb|ACR42692.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus M.16.4] gi|284446494|gb|ADB87996.1| Nitrilase/cyanide hydratase or apolipoprotein N-acyltransferase [Sulfolobus islandicus L.D.8.5] gi|323475417|gb|ADX86023.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus REY15A] gi|323478138|gb|ADX83376.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus HVE10/4] Length = 238 Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 10/128 (7%) Query: 101 VILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNIC 160 +I D+GN+ + KI+L N EK I G +R IR GILIC DI + Sbjct: 73 IIDDSGNLKGIAKKIHLFN----EEKLRLIPGNEAVLFTYRGIRFGILICYDI-DFPEVA 127 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L +G E + L S N L +E + ++ + I+ N D F G S Sbjct: 128 RELFSKGVEII--LVPSKVRGNGLDIWNEFLRIRVLENRIGIVNANVYSPPD---FPGRS 182 Query: 221 FCFDGQQQ 228 +Q+ Sbjct: 183 VAIVPEQR 190 >gi|313899439|ref|ZP_07832949.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein [Clostridium sp. HGF2] gi|312955727|gb|EFR37385.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein [Clostridium sp. HGF2] Length = 430 Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 11/78 (14%) Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEADYNAC------VLSLRDYVQKNNFHKVIIGLSG 301 +Q+L +W S++ T + + EA++N V +R+ V+ KV++ LSG Sbjct: 90 EQKLEEWP--SEEVLKTFVFTVCKAEANWNMKNFVADQVELIREQVKD---RKVLLALSG 144 Query: 302 GIDSALCAAIAVDALGKE 319 G+DS++ AA+ + A+GK+ Sbjct: 145 GVDSSVVAALLLKAIGKQ 162 >gi|73990456|ref|XP_866417.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase) isoform 4 [Canis familiaris] Length = 724 Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 210 NFLYDIAGCSGTFTVQNRELE---CIQEVKERVGTS---KVLVLLSGGVDSTVCTALLNR 263 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 264 ALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 302 >gi|57103704|ref|XP_534316.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase) isoform 1 [Canis familiaris] gi|73990451|ref|XP_852817.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase) isoform 2 [Canis familiaris] Length = 698 Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 210 NFLYDIAGCSGTFTVQNRELE---CIQEVKERVGTS---KVLVLLSGGVDSTVCTALLNR 263 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 264 ALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 302 >gi|163795878|ref|ZP_02189842.1| N-carbamyl-D-amino acid amidohydrolase [alpha proteobacterium BAL199] gi|159178911|gb|EDP63447.1| N-carbamyl-D-amino acid amidohydrolase [alpha proteobacterium BAL199] Length = 315 Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust. Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 15/142 (10%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAR--EEANRQGMDLILFTELFISGYPPE---- 54 M + + + AQL P+ D + A R ++A +G+ L++F EL ++ + P Sbjct: 1 MSRIINVGAAQLGPIAPDESRVSAVNRMIDLLKQAKDRGVKLVVFPELALTTFFPRYYEQ 60 Query: 55 -----DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGN 107 D F++ + + L + G G +G+ + G S+++ D G Sbjct: 61 DISKMDHHFERGDMP--TPETRPLFEKAKEFGIGFYLGYAELTEGGHRFNTSILVDDTGK 118 Query: 108 IIAVRDKINLPNYSEFHEKRTF 129 I+ K++LP +SE+ KR + Sbjct: 119 IVGKYRKVHLPGHSEYDGKRPW 140 >gi|83815444|ref|YP_446035.1| carbon-nitrogen family hydrolase [Salinibacter ruber DSM 13855] gi|294507953|ref|YP_003572011.1| carbon-nitrogen hydrolase [Salinibacter ruber M8] gi|83756838|gb|ABC44951.1| hydrolase, carbon-nitrogen family [Salinibacter ruber DSM 13855] gi|294344281|emb|CBH25059.1| carbon-nitrogen hydrolase [Salinibacter ruber M8] Length = 283 Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust. Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 13/196 (6%) Query: 39 DLILFTEL-FISGYPPEDLVFKKSFIQACSSAID-----TLKSDTHDGGAGIVVGFPRQD 92 DL++F EL F YP + ++ + + + L DGG +V +D Sbjct: 34 DLVVFPELSFTPFYPRVPVAERRRSARDLAEPVPGPTTEALAEAAADGGVVVVFNLMERD 93 Query: 93 QEGVLNSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILIC 150 E ++ +LDA G ++ +++ Y FHE+ + G + P+ R+G+ +C Sbjct: 94 GERTFDTSPVLDADGTLLGRTRMMHITAYENFHEQGYYDPGDTGAPVYDTAAGRIGVAVC 153 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPY--YHNKLKKRHEIVTGQISHVHLPIIYVNQV 208 D + L Q A+ + A + + + + E+ + H + N+ Sbjct: 154 YD-RHYPEYLRALALQDADLVVVPQAGTVGEWPDGMYE-AELRVAALQHGFFAAL-ANRT 210 Query: 209 GGQDELIFDGASFCFD 224 G + ++ F G SF D Sbjct: 211 GPEGDMQFAGRSFVTD 226 >gi|315169506|gb|EFU13523.1| conserved hypothetical protein TIGR00268 [Enterococcus faecalis TX1342] Length = 283 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 33/67 (49%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K+ + SGGIDS+ A+D LG ENV +++ + S + A A LG L Sbjct: 20 KLAVAYSGGIDSSYLLKKALDTLGAENVLAVVVNSELFSDDEFDKAVDLANGLGANVLGL 79 Query: 354 PIHDLVN 360 + +L + Sbjct: 80 EMSELAD 86 >gi|262306087|gb|ACY45636.1| gln amidotransferase [Periplaneta americana] Length = 197 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D S T LQ E + C+ +++ V N KV++ +SGG+DS +CAA+ Sbjct: 12 NFLFDISGCTGNYTLQGREVE---CLKYVKETVGSN---KVLMLVSGGVDSTVCAALLHK 65 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + LG + V+ Sbjct: 66 ALREDQVIAVHIDNGFMRKNESQRVEQSLEKLGLRLKVI 104 >gi|227514382|ref|ZP_03944431.1| cyanide hydratase [Lactobacillus fermentum ATCC 14931] gi|227087248|gb|EEI22560.1| cyanide hydratase [Lactobacillus fermentum ATCC 14931] Length = 259 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 46/230 (20%), Positives = 94/230 (40%), Gaps = 9/230 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI- 63 +++AI QL+ + N A+ +EA + G D+I+ E++ +GY + L Sbjct: 1 MRVAIDQLDVALARPDQNFAQVAADVKEAAKAGADVIVIPEMWNTGYALDQLGDLADLDG 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILD-AGNIIAVRDKINLPNYSE 122 Q + L D G V R + N+ + D G ++ DK++L + Sbjct: 61 QRTKQTLARLARDNQINIVGGSVAIKRGKR--FYNTTYVYDRTGQLVGDYDKVHL--FGL 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 +E +G++ + ++ IC D+ + + + K G++ LF P Sbjct: 117 MNEGEFISAGHAPNRFALDGVKAASAICYDL-RFPEWLRTISKGGSQILFLPAQWPV--Q 173 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 ++ + ++ + ++ VN+VG F G S D ++ F+ Sbjct: 174 RIDQWRILLQARAIENQCFVVAVNRVGDDAANHFGGNSMVIDPVGKVLFE 223 >gi|317054937|ref|YP_004103404.1| exsB protein [Ruminococcus albus 7] gi|315447206|gb|ADU20770.1| exsB protein [Ruminococcus albus 7] Length = 228 Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 2/127 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++ SGG+DSA C A+A+ GKENV + + Y + ++ A A+ G L Sbjct: 2 KALVLFSGGLDSATCLALAIKKHGKENVTALSVFYGQKHDKEIQAAKNVAEYYGVTLKTL 61 Query: 354 PIHDL-VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + + + SL+S ++ P AE + S G + + L ++ IS Sbjct: 62 DLALIFADSDCSLLSNSDKDIPHESYAEQL-SHTDGKPVSTYVPFRNGLFLASAASIAIS 120 Query: 413 VGYGTLY 419 + G +Y Sbjct: 121 LDCGVIY 127 >gi|281413095|ref|YP_003347174.1| NAD synthase [Thermotoga naphthophila RKU-10] gi|281374198|gb|ADA67760.1| NAD synthase [Thermotoga naphthophila RKU-10] Length = 303 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK-YTSPQSLEDAAACAKALGCKYDV 352 K+ + SGG DS+L A +A ALG+E V+ + + + YT +S E A+ G K+ Sbjct: 5 KLYVAFSGGKDSSLVAILAKMALGEERVELVTVDWSPYTYERSREIVRNFAEKHGLKHTF 64 Query: 353 LP 354 +P Sbjct: 65 IP 66 >gi|194221748|ref|XP_001488278.2| PREDICTED: similar to GMPS protein [Equus caballus] Length = 1032 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +R+ V + KV++ LSGG+DS +C A+ Sbjct: 544 NFLYDIAGCSGTFTVQNRELE---CIREIRERVGTS---KVLVLLSGGVDSTVCTALLNR 597 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 598 ALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 636 >gi|260435745|ref|ZP_05789715.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. WH 8109] gi|260413619|gb|EEX06915.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. WH 8109] Length = 383 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAAACAKALGCKY 350 H+V +GLSGG+DS+L AA+ V+A + T+ L + L DAA + LG + Sbjct: 25 HRVAVGLSGGVDSSLTAALLVEAGWQVEGLTLWLMSGKGACCAEGLVDAAGICEQLGIPH 84 Query: 351 DVL 353 V+ Sbjct: 85 HVV 87 >gi|320323628|gb|EFW79712.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. glycinea str. B076] gi|320328267|gb|EFW84271.1| carbon-nitrogen family hydrolase [Pseudomonas syringae pv. glycinea str. race 4] Length = 246 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 47/229 (20%), Positives = 92/229 (40%), Gaps = 17/229 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ GDI N+A + A +LF EL ++GY P+ + + + A Sbjct: 6 LAVAQFCSARGDIEQNLAGHLAFMQRAADLRASYLLFPELSLTGYEPD--LARALALHAD 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN-YSEFHE 125 + ++ +K+ +G P + N +++ A A D Y E Sbjct: 64 DARLEPIKALAIKLRLVTTIGVPLKGA----NDSILIGALTFAADGDVTTYAKQYLHPGE 119 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 + F +G + + R+G+ +C D + +++ + + + S+ SP Sbjct: 120 DKVFSAGNKDCYLPIDQQRIGLCVCADFTQPAHVQRIAEGGAWVYAASVLISP---GGYA 176 Query: 186 KRHEIVTGQISHVHLPIIYVNQ---VGGQDEL----IFDGASFCFDGQQ 227 + E++ G +LP++ N GG + ++DGA G Q Sbjct: 177 QDAELLAGHARRHNLPVLVANHGAPTGGWESAGRSGLWDGAGRWIGGMQ 225 >gi|317405117|gb|EFV85462.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Achromobacter xylosoxidans C54] Length = 296 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 30/181 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A Q PV+G++A N+A++ E+A QG L++ EL +GY VF Sbjct: 14 IHVASVQTAPVMGEVAANVARSIELVEQAAAQGARLVVLPELANTGY-----VF------ 62 Query: 65 ACSSAIDTLKSDTHDG-------------GAGIVVGFPRQDQEGVLNSVVILDAGNIIAV 111 A L DG G +V G + + N+ +I Sbjct: 63 ASRQEAHALAESVPDGPSSQAWIALARRLGIYLVAGIAERSGGRLYNAAIIAGPDGYRGT 122 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEF 170 K++L E F G P+ + RLG+ IC D W + + L +GA+ Sbjct: 123 YRKLHLWG----DENLFFEPGDLGLPVFDTEFGRLGVAICYDGW-FPEVYRLLALRGADI 177 Query: 171 L 171 + Sbjct: 178 V 178 >gi|73990462|ref|XP_866454.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase) isoform 7 [Canis familiaris] Length = 700 Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 212 NFLYDIAGCSGTFTVQNRELE---CIQEVKERVGTS---KVLVLLSGGVDSTVCTALLNR 265 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 266 ALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 304 >gi|262306081|gb|ACY45633.1| gln amidotransferase [Neogonodactylus oerstedii] Length = 197 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%) Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 C+ ++R+ V N KV++ +SGG+DS +CAA+ AL ++ V + + + Sbjct: 33 CITAIREAVGSN---KVLMLVSGGVDSTVCAALLHKALSEDQVIAVHIDNGFMRKNESLQ 89 Query: 339 AAACAKALGCKYDVL 353 + LG K V+ Sbjct: 90 VEQSLRKLGLKLRVI 104 >gi|262306063|gb|ACY45624.1| gln amidotransferase [Libinia emarginata] Length = 194 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ + S + LQ E C+ ++++V N KV++ +SGG+DS +CAA+ Sbjct: 8 NFLYEVSGLSGTYTLQSRELQ---CITYIKEHVGSN---KVLMLVSGGVDSTVCAALLHK 61 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL +E V + + + + LG K V+ Sbjct: 62 ALAEEQVIAVHIDNGFMRKNESLQVEQSLRRLGLKLTVV 100 >gi|261867499|ref|YP_003255421.1| ExsB protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412831|gb|ACX82202.1| ExsB protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 234 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 30/64 (46%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N +K ++ SGG DS C +A+ G ENV+ I Y LE A A+ L K Sbjct: 3 NQPNKALVIFSGGQDSTTCLFLAMQEFGAENVEVITFQYGQRHVIELEKARWIAQDLKVK 62 Query: 350 YDVL 353 VL Sbjct: 63 QTVL 66 >gi|170289520|ref|YP_001739758.1| ExsB family protein [Thermotoga sp. RQ2] gi|170177023|gb|ACB10075.1| ExsB family protein [Thermotoga sp. RQ2] Length = 303 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY-KYTSPQSLEDAAACAKALGCKYDV 352 K+ + SGG DS+L A +A ALG+E V+ + + + YT +S E A+ G K+ Sbjct: 5 KLYVAFSGGKDSSLVAILAKMALGEERVELVTVDWGPYTYERSREIVRNFAEKHGLKHTF 64 Query: 353 LP 354 +P Sbjct: 65 IP 66 >gi|73990454|ref|XP_866405.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase) isoform 3 [Canis familiaris] Length = 727 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D + + +Q E + C+ +++ V + KV++ LSGG+DS +C A+ Sbjct: 212 NFLYDIAGCSGTFTVQNRELE---CIQEVKERVGTS---KVLVLLSGGVDSTVCTALLNR 265 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + + K LG + V+ Sbjct: 266 ALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 304 >gi|84387665|ref|ZP_00990682.1| hydrolase, carbon-nitrogen family [Vibrio splendidus 12B01] gi|84377510|gb|EAP94376.1| hydrolase, carbon-nitrogen family [Vibrio splendidus 12B01] Length = 258 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 15/155 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPP------EDLVF 58 +K A+ Q P+ N +RA EA+ ++L E +SGYPP D+ F Sbjct: 1 MKFALLQF-PISAKSTDNYQTIKRAICEASENDAQVLLTQECALSGYPPVEISSVSDIDF 59 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 ++ I A + I+ +K + + +G RQ E NS+ I++ + DK L Sbjct: 60 EQQDI-AFNEIIELVK----EKQIYLFLGCIRQCGERAANSIAIIEPSGYVQYYDKRALW 114 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 + + N + + IR+G+ +C +I Sbjct: 115 GWD---ADNFVVDSNFNGVVEIKGIRIGVRVCYEI 146 >gi|315149756|gb|EFT93772.1| conserved hypothetical protein TIGR00268 [Enterococcus faecalis TX0012] Length = 278 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 33/67 (49%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K+ + SGGIDS+ A+D LG ENV I++ + S + A A LG L Sbjct: 20 KLAVAYSGGIDSSYLLKKALDTLGAENVLAIVVNSELFSDDEFDKAVDLANGLGANVLGL 79 Query: 354 PIHDLVN 360 + +L + Sbjct: 80 EMSELAD 86 >gi|325168844|ref|YP_004280634.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Agrobacterium sp. H13-3] gi|325064567|gb|ADY68256.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Agrobacterium sp. H13-3] Length = 579 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 8/150 (5%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC- 66 A Q P + + A NI++ EEA + G LI+ E+ +GY D K F++A Sbjct: 10 AAIQFEPTMFEKARNISRLSALCEEAAQAGARLIVTPEMGTTGYCWFDRAEVKPFVEAIP 69 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNYSEFH 124 D ++ IVVG P D L N+ V++ I+ K ++ Sbjct: 70 GPTTDVFQAIARKHRCYIVVGMPEVDPASDLYYNTAVLIGPDGIVGRHRK----SHPYIA 125 Query: 125 EKRTFISGYSNDPIVFRDI-RLGILICEDI 153 E + +G + +I R+ +L+C D+ Sbjct: 126 EPKWAANGDIVHEVFETEIGRISMLVCMDL 155 >gi|168705515|ref|ZP_02737792.1| bifunctional GMP synthase/glutamine amidotransferase protein [Gemmata obscuriglobus UQM 2246] Length = 514 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 24/32 (75%) Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKE 319 +K +VI GLSGG+DS++CAA+ V A+G + Sbjct: 212 RKVGNKRVICGLSGGVDSSVCAALLVKAIGPQ 243 >gi|167377556|ref|XP_001734444.1| NH(3)-dependent NAD(+) synthetase [Entamoeba dispar SAW760] gi|165904059|gb|EDR29421.1| NH(3)-dependent NAD(+) synthetase, putative [Entamoeba dispar SAW760] Length = 306 Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 28/213 (13%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN--VQTIM-LPYKYTSPQSLEDA 339 L +Y ++ +++ SGGIDS++ AA+ V A N +Q I+ L S S+++ Sbjct: 38 LNNYFKECGLKGIVLNCSGGIDSSVTAALCVHAQKMPNSPIQKILCLAQPIHSTASIQNK 97 Query: 340 A-ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS--- 395 A + LG + + + ++ SL+ + + + ++S +R +S Sbjct: 98 AFIVCEHLGIEIKTIDQTTIFDNLHSLVESSVGLKGNAFSDGQLRSYMRTPTAYYVSQLM 157 Query: 396 --NHSKAMLLTTSNKSEISVGYGTLY---GDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 N ++++ T N E GY Y GD + + DL+K +V+++ + Sbjct: 158 SANGIPSVVMGTGNFDE--DGYILYYCKAGDGVVDLSLISDLHKAEVYRVGAELK----- 210 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 +P IL PSA+L QTD++ + Sbjct: 211 ---------LPDIILGAVPSADLWSGQTDEDEI 234 >gi|313634999|gb|EFS01379.1| hydrolase in agr operon [Listeria seeligeri FSL N1-067] Length = 259 Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust. Identities = 51/232 (21%), Positives = 94/232 (40%), Gaps = 31/232 (13%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K+A+ Q + N A+ +A EA + G D+ + E++ +GY +L Sbjct: 3 KLALCQTDVAFKYPDANYARMEKAIIEAAKNGADVAILPEMWNTGYALNEL--------- 53 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAG----NIIAVRDKIN--LPN 119 + D T D + G + Q ++ V + G N + D+ L + Sbjct: 54 -AGLADLNGERTKD----FLSGLAEKHQIAIIGGSVAISEGNKFSNTMYAFDRYGSLLSS 108 Query: 120 YSEFH-----EKRTFISGYSNDPIVFR--DIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 Y + H + FI ND +FR D+ IC D+ I KH +G+E LF Sbjct: 109 YKKVHLFQLMNEHLFIEP-GNDTNLFRLNDVSCAGFICYDVRFPEWIRKH-TSEGSEVLF 166 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++ + ++ + +++ + ++ VN+VG + F+G S D Sbjct: 167 V--SAQWPAERIVQWEQLLIARAIENQAFVVAVNRVGDDPQNHFNGHSLVID 216 >gi|284050313|ref|ZP_06380523.1| hypothetical protein AplaP_02442 [Arthrospira platensis str. Paraca] gi|291570204|dbj|BAI92476.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 275 Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + +I SGGIDS L A IA D LG + + P+ LEDA A +G Sbjct: 14 TGMEQALIAYSGGIDSTLVAKIAYDILGDRALAVTAVSPSLL-PEDLEDARIQAAMIGIS 72 Query: 350 YDVLPIHDLVNHFFS 364 ++ + ++ N ++ Sbjct: 73 HEEIYTQEMANPNYT 87 >gi|78185088|ref|YP_377523.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. CC9902] gi|123580788|sp|Q3AV73|MNMA_SYNS9 RecName: Full=tRNA-specific 2-thiouridylase mnmA gi|78169382|gb|ABB26479.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. CC9902] Length = 389 Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAAACAKALGCKY 350 H+V +GLSGG+DS+L AA+ V+A + T+ L + L DAA + LG + Sbjct: 25 HRVAVGLSGGVDSSLTAALLVEAGWEVEGLTLWLMSGKGACCAEGLVDAAGICEQLGIPH 84 Query: 351 DVL 353 V+ Sbjct: 85 HVV 87 >gi|51873878|gb|AAH80685.1| Gmps protein [Mus musculus] Length = 477 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 36/71 (50%) Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +R+ +K KV++ LSGG+DS +C A+ AL ++ V + + + + + Sbjct: 11 IREIKEKVGTSKVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEA 70 Query: 343 AKALGCKYDVL 353 K LG + V+ Sbjct: 71 LKKLGIQVKVI 81 >gi|315168613|gb|EFU12630.1| NAD+ synthetase [Enterococcus faecalis TX1341] Length = 275 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%) Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKV-IIGLSGGIDSALCAAIAVDALGKENVQT-- 323 +P + + + + L+ Y+ K+ F K ++G+SGG DS L +A A+ + +T Sbjct: 15 LPTIDPKEEVRKSIDFLKAYLTKHPFLKTFVLGISGGQDSTLAGRLAQLAMTEMREETGD 74 Query: 324 -------IMLPYKYTSPQSLEDAAAC--AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 I LPY + ++ AA + + D+ P D + SL + +Q Sbjct: 75 MSYQFIAIRLPYGEQADEADAQAALTFIQPDVSLRVDIKPAVDAM--VGSLENAGVQ--I 130 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 S N+++R R A++ + ++ T + +E + T YGD PL L K Sbjct: 131 SDFNKGNMKARQRMITQYAVAGENAGAVIGTDHAAENVTAFFTKYGDGGADILPLFRLNK 190 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL---RPHQTDQESLP-PYPILD 490 R + LG P ++ K P+A+L +P D+ +L Y +D Sbjct: 191 ---------RQGKALLKELGA-----PEALYLKIPTADLEDDKPLVADEVALGVTYDAID 236 Query: 491 DII--KRIVENEESFINN 506 D + K++ E ++ I N Sbjct: 237 DYLEGKKVSETDQQTIEN 254 >gi|312900465|ref|ZP_07759770.1| conserved hypothetical protein TIGR00268 [Enterococcus faecalis TX0470] gi|311292416|gb|EFQ70972.1| conserved hypothetical protein TIGR00268 [Enterococcus faecalis TX0470] Length = 278 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 33/67 (49%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K+ + SGGIDS+ A+D LG ENV +++ + S + A A LG L Sbjct: 20 KLAVAYSGGIDSSYLLKKALDTLGAENVLAVVVNSELFSDDEFDKAVDLANGLGANVLSL 79 Query: 354 PIHDLVN 360 + +L + Sbjct: 80 EMSELAD 86 >gi|254412279|ref|ZP_05026054.1| conserved hypothetical protein TIGR00268 [Microcoleus chthonoplastes PCC 7420] gi|196181245|gb|EDX76234.1| conserved hypothetical protein TIGR00268 [Microcoleus chthonoplastes PCC 7420] Length = 274 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + +I SGG+DS L A IA D LG + + P+ LEDA A +G ++++ Sbjct: 18 RALIAYSGGVDSTLVAKIAYDVLG-DRALAVTAESPSLLPEELEDARIQAAVIGIPHELV 76 Query: 354 PIHDLVNHFFS 364 ++ N ++ Sbjct: 77 QTDEMNNPNYT 87 >gi|229581355|ref|YP_002839754.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus Y.N.15.51] gi|228012071|gb|ACP47832.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Sulfolobus islandicus Y.N.15.51] Length = 238 Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 10/128 (7%) Query: 101 VILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNIC 160 +I D+GN+ + KI+L N EK I G +R IR GILIC DI + Sbjct: 73 IIDDSGNLKGIAKKIHLFN----EEKLRLIPGNEAVLFTYRGIRFGILICYDI-DFPEVA 127 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L +G E + L S N L +E + ++ + I+ N D F G S Sbjct: 128 RELFSKGVEII--LVPSKVRGNGLDIWNEFLRIRVLENRIGIVNANVYNPPD---FPGRS 182 Query: 221 FCFDGQQQ 228 +Q+ Sbjct: 183 VAIVPEQR 190 >gi|224368901|ref|YP_002603063.1| ATP-utilizing protein of the PP-loop superfamily [Desulfobacterium autotrophicum HRM2] gi|223691618|gb|ACN14901.1| ATP-utilizing protein of the PP-loop superfamily [Desulfobacterium autotrophicum HRM2] Length = 276 Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 + K+ I SGG+DSA AA+A D G I + + S Q +A A+A+G ++ Sbjct: 15 YGKIAIAFSGGVDSAFLAAVAKDTCGSS--VAITVKSAFQSGQEAYNAVCMAEAIGIRHV 72 Query: 352 VLPIHDLVN 360 V+ L N Sbjct: 73 VVQADVLGN 81 >gi|262066347|ref|ZP_06025959.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium periodonticum ATCC 33693] gi|291379911|gb|EFE87429.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Fusobacterium periodonticum ATCC 33693] Length = 343 Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 10/123 (8%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV+IG+SGG+DS++ A + + G E + + + S + +EDA LG ++V+ Sbjct: 3 KVVIGMSGGVDSSVSAYLLKEQ-GYEVIGVTLNQHLEESSKDIEDAKKVCDRLGIIHEVV 61 Query: 354 PIHD-----LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 I ++ +F P I + I+ + IL ++N KA + T + Sbjct: 62 NIRKNFENIVIKYFLDGYKSGKTPSPCVICDDEIKFK----ILFEVANKYKADYVATGHY 117 Query: 409 SEI 411 + + Sbjct: 118 TSV 120 >gi|260430198|ref|ZP_05784172.1| nitrilase 2 [Citreicella sp. SE45] gi|260418670|gb|EEX11926.1| nitrilase 2 [Citreicella sp. SE45] Length = 310 Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 26/50 (52%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE 54 K A+ Q V DI ++AKA EA QG L +F E +IS YP E Sbjct: 3 FKAAVIQAGAVPFDIEASLAKAEVLIAEAGAQGCRLAVFPEAYISAYPKE 52 >gi|149199461|ref|ZP_01876496.1| hypothetical protein LNTAR_01367 [Lentisphaera araneosa HTCC2155] gi|149137396|gb|EDM25814.1| hypothetical protein LNTAR_01367 [Lentisphaera araneosa HTCC2155] Length = 265 Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 23/124 (18%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + + I SGG+DS+L AA+A + + E V+ I+ L++A A A+ Sbjct: 17 QSLDSLAIAYSGGVDSSLLAALAYEFISPEKVELIIADSPSIPRSELKEAKALAEERNWD 76 Query: 350 YDVLPIHDLVN----------------HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 ++ H++ N FS MS + +E ++I++ G IL Sbjct: 77 LTIIYTHEIDNPNYQENSGDRCYYCKSELFSEMSAYAKE-------KDIRTLAYGAILDD 129 Query: 394 LSNH 397 LS+H Sbjct: 130 LSDH 133 >gi|148270790|ref|YP_001245250.1| ExsB family protein [Thermotoga petrophila RKU-1] gi|147736334|gb|ABQ47674.1| ExsB family protein [Thermotoga petrophila RKU-1] Length = 303 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK-YTSPQSLEDAAACAKALGCKYDV 352 K+ + SGG DS+L A +A ALG+E V+ + + + YT +S E A+ G K+ Sbjct: 5 KLYVAFSGGKDSSLVAILAKMALGEERVELVTVDWSPYTYERSREIVRNFAEKHGLKHTF 64 Query: 353 LP 354 +P Sbjct: 65 IP 66 >gi|209528333|ref|ZP_03276789.1| conserved hypothetical protein [Arthrospira maxima CS-328] gi|209491236|gb|EDZ91635.1| conserved hypothetical protein [Arthrospira maxima CS-328] Length = 275 Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 + +I SGGIDS L A IA D LG + + P+ LEDA A +G + Sbjct: 15 EMEQALIAYSGGIDSTLVAKIAYDILGDRALAVTAVSPSLL-PEDLEDARIQAAMIGISH 73 Query: 351 DVLPIHDLVNHFFS 364 + + ++ N ++ Sbjct: 74 EEIYTQEMANPNYT 87 >gi|187922733|ref|YP_001894375.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia phytofirmans PsJN] gi|187713927|gb|ACD15151.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Burkholderia phytofirmans PsJN] Length = 283 Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 12/142 (8%) Query: 22 NIAKARRAREEANRQGMDLILFTELF-ISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDG 80 N+A+A R EA +G L+L E F G+ D + + Q I +D Sbjct: 35 NLAEAGRLIAEAAAEGAQLVLLPEYFCFMGFKDTDKLAVREPYQ--DGPIQRFLADAARR 92 Query: 81 GAGIVVG--FPRQDQEG--VLNSVVILDA-GNIIAVRDKINLPNYSE----FHEKRTFIS 131 V+G P E VLN+ ++ D GN +A DKI+L N+ + F E RT Sbjct: 93 HQVWVIGGTLPLMSPEAARVLNTTLVFDPQGNEVARYDKIHLFNFEKGEESFDEARTICP 152 Query: 132 GYSNDPIVFRDIRLGILICEDI 153 G R+G+ +C D+ Sbjct: 153 GGEVRTFEAPFGRVGLSVCYDL 174 >gi|312623047|ref|YP_004024660.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor kronotskyensis 2002] gi|312203514|gb|ADQ46841.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Caldicellulosiruptor kronotskyensis 2002] Length = 231 Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 84/222 (37%), Gaps = 24/222 (10%) Query: 15 VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLK 74 + I N+ K E+A + +DLI F E+ ++GY E L+ + A+D + Sbjct: 3 ISNSIENNLLKIANFLEQAKVEEIDLICFPEMALTGYNIE-LLKSMNLNDIILPALDKIS 61 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH----EKRTFI 130 ++G P + + + N I+ Y + H EK+ F Sbjct: 62 QLASKYSVCCIIGHPFYEGKELKNCASIIFPDG--------RCEKYYKLHPTEIEKKIFS 113 Query: 131 SGYSNDPIVF--RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY-----HNK 183 G +P+VF + R G IC D NI K K + + +F L A+ YY K Sbjct: 114 DG--KNPLVFEYKQKRFGTAICRD-QNFYNIFKEYKDRECDGVFIL-AAHYYSPKEARWK 169 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + K I + + N G +I G S DG Sbjct: 170 IDKNRSIPITRAVENGYYVFLANATGAHLNMISLGHSLIVDG 211 >gi|94039528|dbj|BAE93539.1| NAD synthase [Paulownia witches'-broom phytoplasma] Length = 112 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 4/110 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +A VG+ N A + N+ +LF EL +S Y DL F+ +F++ Sbjct: 7 IKIELASPPLTVGNPLKN---AYSMQNVLNKSKASFVLFPELCLSSYTAGDLFFETTFLE 63 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 A++ L + G ++G P E + N VI+ I+ + K Sbjct: 64 QNFQALNWLLKNNFFEGV-YILGMPLALHEVLFNVAVIIQKDKILGITPK 112 >gi|159186664|ref|NP_396472.2| amidohydrolase [Agrobacterium tumefaciens str. C58] gi|159141724|gb|AAK90913.2| amidohydrolase [Agrobacterium tumefaciens str. C58] Length = 579 Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 8/150 (5%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC- 66 A Q P + + A NI++ EEA + G LI+ E+ +GY D K F++ Sbjct: 10 AAIQFEPTMFEKARNISRLTALCEEAAQAGARLIVTPEMGTTGYCWFDRAEVKPFVETIP 69 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNYSEFH 124 D + IVVG P D E L N+ V++ +I K ++ Sbjct: 70 GPTTDVFHAIARQHRCYIVVGMPEVDPESDLYYNTAVLIGPDGVIGRHRK----SHPYIA 125 Query: 125 EKRTFISGYSNDPIVFRDI-RLGILICEDI 153 E + +G + +I R+ +L+C D+ Sbjct: 126 EPKWAANGDIVHEVFETEIGRISMLVCMDL 155 >gi|11498054|ref|NP_069278.1| succinoglycan biosynthesis regulator (exsB) [Archaeoglobus fulgidus DSM 4304] gi|74514120|sp|O29807|QUEC_ARCFU RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=Archaeosine biosynthesis protein queC; AltName: Full=PreQ(0) synthase gi|2650185|gb|AAB90792.1| succinoglycan biosynthesis regulator (exsB) [Archaeoglobus fulgidus DSM 4304] Length = 239 Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP-QSLEDAAACAKALGCKYDV 352 K ++ LSGGIDS+ +D + + T K++ +S E A AK K D+ Sbjct: 2 KAVMLLSGGIDSSTLLYYLLDGGYEVHALTFFYGQKHSKEIESAEKVAKAAKVRHLKVDI 61 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI----RGNILMALS 395 IHDL++ + +L + +E P +E +Q R R IL++++ Sbjct: 62 STIHDLIS-YGALTGE--EEVPKAFYSEEVQRRTIVPNRNMILLSIA 105 >gi|116072337|ref|ZP_01469604.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. BL107] gi|116064859|gb|EAU70618.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Synechococcus sp. BL107] Length = 389 Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIML--PYKYTSPQSLEDAAACAKALGCKY 350 H+V +GLSGG+DS+L AA+ V+A + T+ L + L DAA + LG + Sbjct: 25 HRVAVGLSGGVDSSLTAALLVEAGWEVEGLTLWLMSGKGACCAEGLVDAAGICEQLGIPH 84 Query: 351 DVL 353 V+ Sbjct: 85 HVV 87 >gi|283778471|ref|YP_003369226.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Pirellula staleyi DSM 6068] gi|283436924|gb|ADB15366.1| Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Pirellula staleyi DSM 6068] Length = 242 Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 29/50 (58%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE 54 +K+A+ QL PVVG + NI + A G L++F EL ++GY P+ Sbjct: 1 MKLAVVQLRPVVGAVGRNIDRHLALTAAAASLGAQLVIFPELSLTGYEPK 50 >gi|15643833|ref|NP_228881.1| hypothetical protein TM1075 [Thermotoga maritima MSB8] gi|4981620|gb|AAD36152.1|AE001768_1 hypothetical protein TM_1075 [Thermotoga maritima MSB8] Length = 303 Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK-YTSPQSLEDAAACAKALGCKYDV 352 K+ + SGG DS+L A +A ALG+E V+ + + + YT +S E A+ G K+ Sbjct: 5 KLYVAFSGGKDSSLVAILAKMALGEERVELVTVDWSPYTYERSREIVRNFAEKHGLKHTF 64 Query: 353 LP 354 +P Sbjct: 65 IP 66 >gi|309379634|emb|CBX21805.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 218 Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ SGG DS C AV G+ENV+ I Y LE AA A+ LG + Sbjct: 4 QQALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLGVPQTL 63 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGI-VAEN 381 + + N ++ L +E + I AEN Sbjct: 64 VDL----NLMKTITHNALMDEAAAIETAEN 89 >gi|315639130|ref|ZP_07894296.1| carbon-nitrogen family hydrolase [Campylobacter upsaliensis JV21] gi|315480767|gb|EFU71405.1| carbon-nitrogen family hydrolase [Campylobacter upsaliensis JV21] Length = 280 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 11/176 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE--DLVFK 59 + ++K+A Q +P + N+ KA ++A +G +++ ELF SGY E DL Sbjct: 1 MSRVKLASVQFSPASFEREANMEKAVFWTKKALEEGARIVVLPELFDSGYCVEDKDLELG 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + SS + L + A I+ + + + ++ IL ++ KI L + Sbjct: 61 LDLNNSKSSTLAPLIELSKIYNAYIIANSIEKSKNKLYDTAYILSKKGVLGKYRKIYLYD 120 Query: 120 YSEFHEKRTFISG--YSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFL 171 +EK+ F G Y + F + +++G IC +I S + L QGA+ L Sbjct: 121 ----NEKKRFNKGKKYPVFELKFEEFKVKVGFGICYEI-GFSESARFLALQGAQIL 171 >gi|254819156|ref|ZP_05224157.1| aliphatic nitrilase [Mycobacterium intracellulare ATCC 13950] Length = 319 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 15/140 (10%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYP------------ 52 ++ A QL+PV+ G + K + R+ + F E I YP Sbjct: 4 IRAAAVQLSPVLYSREGTVEKVVGKIAQLARRDVQFATFPETVIPYYPYFSFVQRPFEMR 63 Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVR 112 PE L + S A+D + G + +G +D + N+ ++ DA + R Sbjct: 64 PEHLRLLDQAVAIPSPAVDAIAEAARAAGMVVSIGVNERDGASLYNTQLLFDADGTLLQR 123 Query: 113 DKINLPNYSEFHEKRTFISG 132 + +P Y HE+ + G Sbjct: 124 RRKIMPTY---HERMVWGQG 140 >gi|332664626|ref|YP_004447414.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Haliscomenobacter hydrossis DSM 1100] gi|332333440|gb|AEE50541.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Haliscomenobacter hydrossis DSM 1100] Length = 317 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 29/185 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ LKIA Q GD A N+A + +A +G +I F E I+GY + K Sbjct: 1 MQNLKIATVQFEHRSGDKAYNLAVIEKMAIKAAGEGAKVIAFHECSITGYTFARNLSKVQ 60 Query: 62 FIQ-----ACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKI 115 ++ ++I L I+ G F + +Q+ + + V +D ++A Sbjct: 61 MLELAEYIPAGASIQELTRIAEQYDIAILAGLFEKDEQDNLYKAYVCVDKNGLLA----- 115 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRL-----GILICEDIWKNSNICKHLKKQ---G 167 ++H+ FI+ + + + + L GILIC D +NI ++++ G Sbjct: 116 ------KYHKIHPFINPHLSPGVKYCVFELYGWKCGILICYD----NNIIENVRATKLLG 165 Query: 168 AEFLF 172 A+ +F Sbjct: 166 ADVIF 170 >gi|251779666|ref|ZP_04822586.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083981|gb|EES49871.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 259 Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 13/140 (9%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYP--PEDLVFKK-SFIQACSSAIDTLK 74 D N+ K EEA+ +G++LILF E+ ++G + L + I+ C +K Sbjct: 14 DELANMRKVETLVEEASMKGVELILFPEMTLTGVTLNIDKLTLSQDKIIEWCREL--AIK 71 Query: 75 SDTHDGGAGIVVGF-PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY 133 ++ + G +G+ R D + + N +VI + G +I KI+L Y E T+ +G Sbjct: 72 NNINIG-----IGYGKRIDAKALNNYIVISNYGEVITDYTKIHLFTYG--GEPTTYYNGI 124 Query: 134 SNDPIVFRDIRLGILICEDI 153 + + + L IC D+ Sbjct: 125 NIENYKIGEFSLSSFICYDL 144 >gi|55820545|ref|YP_138987.1| hypothetical protein stu0462 [Streptococcus thermophilus LMG 18311] gi|55822436|ref|YP_140877.1| hypothetical protein str0462 [Streptococcus thermophilus CNRZ1066] gi|55736530|gb|AAV60172.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] gi|55738421|gb|AAV62062.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 262 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 23/250 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +KIA+ Q++ G N + E A D+I+ E++ +GY ++L + K Sbjct: 1 MKIALVQMDVAHGQPVENKKHVKEMLERALVANPDVIVLPEMWNTGYALDELDGLADKEG 60 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPNY 120 +++ + L + I+ G +++G + V +G++I + K++L + Sbjct: 61 LESQ----EFLSQFAREHAVAILGGSVAIERDGKFYNTTYVYNKSGDLINIYSKVHL--F 114 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDI----WKNSNICKHLKKQGAEFLFSLNA 176 E R +G + + +IC DI W + + QGA+ LF + Sbjct: 115 GLMAEDRYMSAGAAESIFELDGVIAASVICYDIRFPEWVRTQMA-----QGAKVLFVVAQ 169 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG-GQD-ELIFDGASFCFDGQQQLAFQMK 234 P ++++ ++ + ++ VN+VG G D + IF G S D + Q K Sbjct: 170 WP--EPRVQQWEILLKARAVENQAFVVAVNRVGAGPDPDDIFSGHSMIIDPLGNVVLQAK 227 Query: 235 HFSEQNFMTE 244 E F E Sbjct: 228 EHEEGIFTAE 237 >gi|157813146|gb|ABV81318.1| putative GMP synthetase [Podura aquatica] Length = 220 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 +C+ +R VQ +V++ LSGG+DS +CAA+ AL ++ + + + + E Sbjct: 32 SCIEHIRSVVQNK---QVLMLLSGGVDSTVCAALLKKALREDQIIAVHIDNGFLRKNESE 88 Query: 338 DAAACAKALGCKYDVL 353 + LG K V+ Sbjct: 89 NVEKSLVKLGLKIHVV 104 >gi|116493418|ref|YP_805153.1| PP family ATPase [Pediococcus pentosaceus ATCC 25745] gi|116103568|gb|ABJ68711.1| ATP-utilizing enzyme of the PP-loop superfamily [Pediococcus pentosaceus ATCC 25745] Length = 276 Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 28/56 (50%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 +V I SGGIDS +AVD LGK+NV +++ + A AK LG Sbjct: 19 QRVAIAYSGGIDSTYLLKVAVDELGKDNVLAMVVNSELFLDDEYNKALELAKDLGA 74 >gi|261401301|ref|ZP_05987426.1| ExsB protein [Neisseria lactamica ATCC 23970] gi|269208680|gb|EEZ75135.1| ExsB protein [Neisseria lactamica ATCC 23970] Length = 218 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 27/55 (49%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 + ++ SGG DS C AV G+ENV+ I Y LE AA A+ LG Sbjct: 4 QQALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG 58 >gi|146299046|ref|YP_001193637.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Flavobacterium johnsoniae UW101] gi|146153464|gb|ABQ04318.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Flavobacterium johnsoniae UW101] Length = 321 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 29/185 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K LKIA AQ GD N++ + ++A+ +G D+I F E I+GY + ++ Sbjct: 1 MKNLKIATAQFENKSGDKNYNLSVIEKLSQKASIEGCDVISFHECSITGYTFARSLSREQ 60 Query: 62 FIQAC-----SSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKI 115 + +I L I+ G F + + + + V +D ++A Sbjct: 61 MLDLAELIPSGESILKLTEIAKKNDIVILAGLFEKDENNNLFKAQVCVDKNGLVA----- 115 Query: 116 NLPNYSEFHEKRTFISGY--SNDPIVFRDI---RLGILICEDIWKNSNICKHLKKQ---G 167 Y + H FI+ Y + D +I + GILIC D +NI ++++ G Sbjct: 116 ---KYRKLH---PFINPYLTAGDRYCIFEIEGWKCGILICYD----NNIIENVRATKLLG 165 Query: 168 AEFLF 172 A+ +F Sbjct: 166 ADIIF 170 >gi|33241175|ref|NP_876117.1| PP family ATPase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238705|gb|AAQ00770.1| ATP-utilizing enzyme, PP-loop superfamily [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 285 Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%) Query: 267 IPLQEEEADYNACVLSL-RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 + LQ++ A N L L RD+++ + KV I SGG+DS+L AAI + L N + Sbjct: 2 LKLQDQLAKSNVKQLDLLRDFIK--DLKKVCIAYSGGVDSSLIAAIGKEQL-DNNAIAVT 58 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +P LE+A A+ +G ++ ++L Sbjct: 59 GVSASLAPHLLEEARLQARWIGIEHQECKTNEL 91 >gi|322517297|ref|ZP_08070174.1| carbon-nitrogen family hydrolase [Streptococcus vestibularis ATCC 49124] gi|322124127|gb|EFX95666.1| carbon-nitrogen family hydrolase [Streptococcus vestibularis ATCC 49124] Length = 260 Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust. Identities = 50/249 (20%), Positives = 100/249 (40%), Gaps = 23/249 (9%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q++ G N ++ E A D+I+ E++ +GY ++L Sbjct: 1 MKIALVQMDVAHGQPVENKKHVKKMLERALDDNPDVIVLPEMWNTGYALDELDG-----L 55 Query: 65 ACSSAIDTLKSDTH---DGGAGIVVGFPRQDQEGVL--NSVVILDAGNIIAVRDKINLPN 119 A +D+ + +H I+ G +++G + V +G++I K++L Sbjct: 56 ADKDGLDSQELLSHFARKHAVAIIGGSVAIEKDGKFYNTTYVYNKSGDLINTYSKVHL-- 113 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI----WKNSNICKHLKKQGAEFLFSLN 175 + E + +G + +IC DI W + + QGA+ LF + Sbjct: 114 FGLMAEDQYMSAGSGESVFELDGVTAASVICYDIRFPEWVRTQMA-----QGAKVLFVVA 168 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 P ++++ ++ + ++ VN+VG + +F G S D + Q K Sbjct: 169 QWP--EPRVQQWEILLKARAVENQAFVVAVNRVGTGPDDVFSGHSMVIDPLGNVVLQSKE 226 Query: 236 FSEQNFMTE 244 E F + Sbjct: 227 HEEGIFTAD 235 >gi|220929143|ref|YP_002506052.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium cellulolyticum H10] gi|219999471|gb|ACL76072.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Clostridium cellulolyticum H10] Length = 267 Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 18/210 (8%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL-VFK 59 M K+K+ + Q+ V N+ KA EE ++G D+ + E+F Y + ++ Sbjct: 1 MNSKIKLGLCQM-AVTDSKNENVKKAVFMLEECCKRGADIAVLPEMFNCPYDTKLFPLYA 59 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILD-AGNIIAVRDKI-- 115 ++F S + + IV G P + N+ ++ D G IIA KI Sbjct: 60 ENFEN--SKTLSVISDSAKYNNMYIVAGTIPEFSNGCIYNTSIMFDRQGKIIAKHRKIHL 117 Query: 116 ---NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL- 171 N+ + F E +G S R+G+ IC D+ + + + + + GA+ + Sbjct: 118 FDVNIKDGVSFRESDVLAAGRSVTVAQTEFGRIGLAICFDM-RFTELYSQMSEAGAKIII 176 Query: 172 ----FSLNASPYYHNKLKKRHEIVTGQISH 197 F++ P H +L R + QI H Sbjct: 177 TPASFNMTTGP-VHWELLVRARALDNQIFH 205 >gi|313668995|ref|YP_004049279.1| queuosine biosynthesis protein QueC [Neisseria lactamica ST-640] gi|313006457|emb|CBN87920.1| queuosine biosynthesis protein QueC (ec 3.5.-.-) [Neisseria lactamica 020-06] Length = 219 Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 27/55 (49%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 + ++ SGG DS C AV G+ENV+ I Y LE AA A+ LG Sbjct: 4 QQALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG 58 >gi|301156476|emb|CBW15947.1| predicted aluminum resistance protein [Haemophilus parainfluenzae T3T1] Length = 225 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 29/60 (48%) Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N+ K ++ SGG DS C A+ G ENV+T+ Y LE A A+ LG K Sbjct: 7 NHNRKALVIFSGGQDSTTCLIQAIAEYGVENVETVTFQYGQRHAIELEKARWIAQDLGVK 66 >gi|148254641|ref|YP_001239226.1| putative nitrilase/cyanide hydratase family protein [Bradyrhizobium sp. BTAi1] gi|146406814|gb|ABQ35320.1| Putative nitrilase/cyanide hydratase family protein (carbon-nitrogen hydrolase) [Bradyrhizobium sp. BTAi1] Length = 579 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 11/158 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + K+A Q P + + NI E+A G LI+ E+ +GY D Sbjct: 1 MSLQYKVATVQFEPTLAEKERNIESLLALCEQAASSGAKLIVTPEMGTTGYCWYDRAEVA 60 Query: 61 SFIQACSSAID---TLKSDTHDGGAGIVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKIN 116 F++ A + HD +V+G P D + + NS V++ +I K Sbjct: 61 PFVEKVPGATTHRFAALAKRHD--CYVVIGMPEVDDDDIYYNSAVLIGPDGVIGRHRK-- 116 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDI 153 + E + +G ++ + I R+ +LIC DI Sbjct: 117 --THPYISEPKWAAAGDLHNQVFETPIGRIALLICMDI 152 >gi|169830751|ref|YP_001716733.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Candidatus Desulforudis audaxviator MP104C] gi|169637595|gb|ACA59101.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Candidatus Desulforudis audaxviator MP104C] Length = 272 Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 22/199 (11%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ I Q+ PV N+++AR+ EA R G +++ E+F Y E F F + Sbjct: 4 IKLGICQM-PVTASKEQNLSRARQMAAEAARAGARVVVLPEMFNCPYQHE---FFTRFAE 59 Query: 65 AC--SSAIDTLKSDTHDGGAGIVVG-FPRQDQEGVLNSVVILDA-GNIIAVRDKINLPNY 120 C L S + G ++ G P + N+ + G ++ + K++L N Sbjct: 60 TCPDGDTFRMLTSTARELGVYLIGGSIPEAEDGRTYNTCFVYGPDGRMLGRQRKLHLFNI 119 Query: 121 SE----FHEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLF-- 172 F E T G + P VF + G+ IC D+ + + + L +GAE + Sbjct: 120 ETDDLVFRESDTLSPG-TGPPTVFVTPLVTFGVAICFDL-RFPELFRDLAARGAELIVAP 177 Query: 173 ----SLNASPYYHNKLKKR 187 + P++ L+ R Sbjct: 178 AAFNTFTGPPHWELLLRAR 196 >gi|167856371|ref|ZP_02479098.1| queuosine biosynthesis protein QueC [Haemophilus parasuis 29755] gi|167852509|gb|EDS23796.1| queuosine biosynthesis protein QueC [Haemophilus parasuis 29755] Length = 219 Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 27/56 (48%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 K + SGG DS C +A+ GKENV+ + Y L+ A A+ LG K Sbjct: 6 KAAVIFSGGQDSTTCLFLAIKEFGKENVEAVTFQYGQRHAIELDKARWIAQDLGVK 61 >gi|262306025|gb|ACY45605.1| gln amidotransferase [Cryptocellus centralis] Length = 196 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ D S +Q E + C+ +R V N KV++ LSGG+DS +CAA+ Sbjct: 12 NFLLDISGMNGNFTMQSREVE---CIDFIRRSVGSN---KVLMLLSGGVDSTVCAALLHK 65 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL ++ V + + + + LG K V+ Sbjct: 66 ALKEDQVIAVHIDNGFMRKNESLQVEQSLRRLGVKMRVI 104 >gi|71666942|ref|XP_820425.1| GMP synthase [Trypanosoma cruzi strain CL Brener] gi|70885769|gb|EAN98574.1| GMP synthase, putative [Trypanosoma cruzi] Length = 657 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 KV+ SGG+DS +CA + + ALG E V + + + + + E+ A + G V Sbjct: 222 QKVLCLASGGVDSTVCAVLLLKALGPERVVCVHIDHGFMRLRETEEVVAALREAGVSVVV 281 Query: 353 L 353 + Sbjct: 282 V 282 >gi|167807|gb|AAA33213.1| GMP synthetase [Dictyostelium discoideum] Length = 718 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 15/28 (53%), Positives = 22/28 (78%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENV 321 KV++ +SGG+DS +CAA+ A+G ENV Sbjct: 269 KVLVLVSGGVDSTVCAALISKAIGPENV 296 >gi|148977708|ref|ZP_01814269.1| hydrolase, carbon-nitrogen family protein [Vibrionales bacterium SWAT-3] gi|145963076|gb|EDK28345.1| hydrolase, carbon-nitrogen family protein [Vibrionales bacterium SWAT-3] Length = 258 Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 7/151 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDL--VFKKSF 62 +K A+ Q P+ N +RA EA+ ++L E +SGYPP ++ V F Sbjct: 1 MKFALLQF-PISAKSTDNYQTIKRAICEASENDTQVLLTQECALSGYPPVEISSVSNIDF 59 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 Q A + + + + +G RQ E NS+ I++ + DK L + Sbjct: 60 EQQ-DIAFNEIIELVKEKQIYLFLGCIRQCGERAANSIAIIEPSGYVQYYDKRALWGWD- 117 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 + N + + IR+G+ +C +I Sbjct: 118 --ADNFVVDSNFNGVVEIKGIRIGVRVCYEI 146 >gi|151940875|gb|EDN59257.1| nitrilase superfamily [Saccharomyces cerevisiae YJM789] gi|190405397|gb|EDV08664.1| hypothetical protein SCRG_04294 [Saccharomyces cerevisiae RM11-1a] gi|207342801|gb|EDZ70453.1| YLR351Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256271397|gb|EEU06459.1| Nit3p [Saccharomyces cerevisiae JAY291] gi|259148328|emb|CAY81575.1| Nit3p [Saccharomyces cerevisiae EC1118] gi|323336380|gb|EGA77648.1| Nit3p [Saccharomyces cerevisiae Vin13] Length = 291 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 15/165 (9%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMD--LILFTELFISGYPPEDLVFKK 60 +K+K+A+ QL+ D N+ +A E A ++ D L++ E F S Y + Sbjct: 9 QKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYS 68 Query: 61 SFI--QACSSAIDTLKSDTHDGGAGIVVG--FPRQD--QEGVLNSVVILDA-GNIIAVRD 113 I + S+++ L S+ + I+VG P D + + N+ +I + G +I Sbjct: 69 EVINPKEPSTSVQFL-SNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHR 127 Query: 114 KINL-----PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 K++L PN FHE T +G + I + + G+ IC D+ Sbjct: 128 KVHLFDVDIPNGISFHESETLSAGEKSTTIDTKYGKFGVGICYDM 172 >gi|262306089|gb|ACY45637.1| gln amidotransferase [Peripatus sp. 'Pep'] Length = 197 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 N++ + + LQ E + C+ +R+ V+ N KV++ +SGG+DS +CAA+ Sbjct: 12 NFLCNIAECKGTFSLQSRELN---CLEYIRNTVKDN---KVLMLVSGGVDSTVCAALLHK 65 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 AL + V + + + + E +G K V+ Sbjct: 66 ALKRHQVIAVHIDNGFMRKKESEQVENSLNKIGLKLKVV 104 >gi|66812710|ref|XP_640534.1| GMP synthetase [Dictyostelium discoideum AX4] gi|161783815|sp|P32073|GUAA_DICDI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName: Full=GMP synthetase; AltName: Full=Glutamine amidotransferase gi|60468534|gb|EAL66537.1| GMP synthetase [Dictyostelium discoideum AX4] Length = 718 Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust. Identities = 15/28 (53%), Positives = 22/28 (78%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENV 321 KV++ +SGG+DS +CAA+ A+G ENV Sbjct: 269 KVLVLVSGGVDSTVCAALISKAIGPENV 296 >gi|323507842|emb|CBQ67713.1| probable asparagine synthase [Sporisorium reilianum] Length = 635 Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 33/218 (15%) Query: 124 HEKRTFISGYSN--DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 HE R I G S P+V D +L + + +I+ + ++ K LK Q AEF + H Sbjct: 52 HE-RLAIVGISTGAQPLVSTDGKLILAVNGEIYNHRHLRKGLKDQKAEFKTESDCEVILH 110 Query: 182 NKLKKRH-----EIVTGQISHVHLPIIYVNQ--VGGQDEL----IFDGASFCFDGQQQLA 230 L + H +++ G S + L + +D + ++ GAS+ + G + Sbjct: 111 --LYREHGTDFVKMLDGMFSFILLDTTTTPHRVIAARDPIGITTLYQGASYKYPGAIYFS 168 Query: 231 FQMKHFSEQ-----NFMTEWHYDQQLSQWN----YMS----DDSASTMYIPLQEEEADYN 277 ++K E+ +F YD L + Y + D A IP D Sbjct: 169 SELKAIHEECDRIRSFPPGHFYDSSLPEGKETVRYYTPSWLDGDADDAVIPTN--PTDLK 226 Query: 278 ACVLSLRDYVQKNNFHKVIIG--LSGGIDSALCAAIAV 313 SL V+K +V G LSGG+DS+L A+IA Sbjct: 227 LIRESLEKAVRKRLMSEVPYGVLLSGGLDSSLIASIAA 264 >gi|294055153|ref|YP_003548811.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase [Coraliomargarita akajimensis DSM 45221] gi|293614486|gb|ADE54641.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase [Coraliomargarita akajimensis DSM 45221] Length = 356 Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 27/222 (12%) Query: 292 FHKVIIGLSGGIDSALCAAIAVD---ALGKENVQTIM---LPYK-YTSPQSLEDAAACAK 344 KV++ LSGG+DSA+ A + + A+ ++T M P + Q +ED+ A A+ Sbjct: 1 MQKVLVALSGGVDSAVAALLLKEQGYAVSGAYIRTWMNEEAPLADCPAQQDIEDSRAVAQ 60 Query: 345 ALGCKYDVLPI-----HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 LG Y+++ + +VN+ + + P + ++ I N ALS Sbjct: 61 HLGIDYEIVNLVNEYSEHVVNYLVDGYKRGITPNPDMMCNREMKFGIFQN--YALSQGFD 118 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLK--DLYKTQVFQLASWRNSHGITSGLGPLT 457 AM + Y + + G FN L+ D K Q + LA + I L P+ Sbjct: 119 AM---------ATGHYVRKFKNEDGSFNLLEGIDKNKDQTYFLALLKQEQ-IAKALFPVG 168 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVEN 499 E+ P + E + +L P+ ++S + D I R +E+ Sbjct: 169 ELQKPRVRELAIEHQL-PNAAKKDSQGICFLGDMNINRFLEH 209 >gi|319786982|ref|YP_004146457.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudoxanthomonas suwonensis 11-1] gi|317465494|gb|ADV27226.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Pseudoxanthomonas suwonensis 11-1] Length = 294 Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 25/225 (11%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K L +A+ Q GD N+A EA G L+L EL Y + + Sbjct: 4 KTLTVALVQ-ERNQGDADANLAAIEARVAEAAAAGAQLVLLQELHNGAYFCQHESVSEFD 62 Query: 63 I--QACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDA-GNIIAVRDKINL 117 + Q + + L + G ++VG F R+ N+ V+L+ G ++ K+++ Sbjct: 63 LAEQIPGPSTERLGALARKHGV-VIVGSLFERRAPGLYHNTAVVLEKDGTLLGKYRKMHI 121 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI-----RLGILICEDIWKNSNICKHLKKQGAEFLF 172 P+ F+EK F G I FR I RLG+L+C D W + + GAE L Sbjct: 122 PDDPGFYEKFYFTPG----DIGFRPIDTSIGRLGVLVCWDQWY-PEAARLMALAGAELLL 176 Query: 173 SLNASPY-----YHNKLKKRHEIVTGQISHV---HLPIIYVNQVG 209 A + K ++R + H LP++ N+VG Sbjct: 177 YPTAIGWDPDDAQDEKDRQRDAWILSHRGHAVANGLPVLSCNRVG 221 >gi|331269731|ref|YP_004396223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Clostridium botulinum BKT015925] gi|329126281|gb|AEB76226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Clostridium botulinum BKT015925] Length = 346 Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV IGLSGG+DS++ A + L ++ I + K + EDAA A+ L Y +L Sbjct: 4 KVAIGLSGGVDSSVAAYL----LKEKGYDLIGITMKVSDVDVSEDAAKVAEKLDIPYHIL 59 Query: 354 PIHD 357 + D Sbjct: 60 DLRD 63 >gi|157813154|gb|ABV81322.1| putative GMP synthetase [Tanystylum orbiculare] Length = 197 Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%) Query: 269 LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 LQ EA+ C+ +++ V N KV++ +SGG+DS +CAA+ AL + V + + Sbjct: 26 LQSREAE---CIQYIQESVGSN---KVLVLVSGGVDSTVCAALLHKALEQNQVIAVHIDN 79 Query: 329 KYTSPQSLEDAAACAKALGCKYDVL 353 + Q + + LG + V+ Sbjct: 80 GFMRKQESKQVEESLRKLGLQLTVI 104 >gi|66806521|ref|XP_636983.1| nitrilase 2 [Dictyostelium discoideum AX4] gi|74852822|sp|Q54JM9|NIT2_DICDI RecName: Full=Nitrilase homolog 2 gi|60465388|gb|EAL63476.1| nitrilase 2 [Dictyostelium discoideum AX4] Length = 328 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 18/188 (9%) Query: 22 NIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGG 81 N+ A + +EA + G LI E F S Y F+K + L Sbjct: 69 NVQNAIKHIDEAAKNGAKLISLPECFNSPYSTS--TFEKYSETEDGETVKKLSEAAKRNQ 126 Query: 82 AGIVVG-FPRQDQEG--VLNSVVIL-DAGNIIAVRDKINL-----PNYSEFHEKRTFISG 132 +V G P D+ + N+ I D G ++ KI+L PN F E T G Sbjct: 127 IFLVGGSIPEIDKATGKIYNTCFIFNDKGEVVKKHRKIHLFDIDVPNKIRFKESETLTPG 186 Query: 133 YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL-----FSLNASPYYHNKLKKR 187 S + ++G+ IC DI + + K GA+FL F++ P H +L +R Sbjct: 187 DSFSVVDIGYCKIGVAICYDI-RFPELAMLYSKMGAKFLIYPGAFNMVTGP-AHWELLQR 244 Query: 188 HEIVTGQI 195 V Q+ Sbjct: 245 GRAVDNQV 252 >gi|302555200|ref|ZP_07307542.1| N-carbamoylputrescine amidase [Streptomyces viridochromogenes DSM 40736] gi|302472818|gb|EFL35911.1| N-carbamoylputrescine amidase [Streptomyces viridochromogenes DSM 40736] Length = 277 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 25/249 (10%) Query: 40 LILFTELFISGY--PPEDLVFKKSFIQACSSAI-DTLKSDTHDGGAGIVVGFPRQDQEGV 96 ++ F ELF Y +D F + + I ++ + G +V+ ++Q GV Sbjct: 36 VLCFQELFYGPYFCQVQDPAFYEYAERIPEGPIVRRFQALAKELGIVLVLPMYEEEQPGV 95 Query: 97 L-NSVVILDA-GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDI-RLGILICEDI 153 L N+ ++DA G+ + K ++P F EK F G S P+ + R+G+ IC D Sbjct: 96 LYNTAAVIDADGSYLGKYRKTHIPQVRGFWEKFYFRPGNSGWPVFDTKVGRVGVYICYDR 155 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPY----YHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 + L GAE +F+ +A+ Y +L++ V + + + V + G Sbjct: 156 -HFPEGWRALGLAGAEIVFNPSATSRGLSGYLWQLEQPAAAVANEYFVAAINRVGVEEYG 214 Query: 210 GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ-------WNYMSDDSA 262 D F G S+ D + Q ++ E + D +++ W + D + Sbjct: 215 DND---FYGTSYFVDPEAQFVGEVASDKESELVVR---DLDMAKLREVRDRWQFYRDRAP 268 Query: 263 STMYIPLQE 271 T Y PL + Sbjct: 269 GT-YGPLTD 276 >gi|255972478|ref|ZP_05423064.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256762813|ref|ZP_05503393.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|255963496|gb|EET95972.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256684064|gb|EEU23759.1| conserved hypothetical protein [Enterococcus faecalis T3] Length = 275 Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 33/67 (49%) Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K+ + SGGIDS+ A+D LG ENV +++ + S + A A LG L Sbjct: 17 KLAVAYSGGIDSSYLLKKALDTLGAENVLAVVVNSELFSDDEFDKAVDLANGLGANVLGL 76 Query: 354 PIHDLVN 360 + +L + Sbjct: 77 EMSELAD 83 Searching..................................................done Results from round 2 >gi|254780999|ref|YP_003065412.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254040676|gb|ACT57472.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 562 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 562/562 (100%), Positives = 562/562 (100%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK Sbjct: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY Sbjct: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY Sbjct: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN Sbjct: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS Sbjct: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN Sbjct: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG Sbjct: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ Sbjct: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA Sbjct: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 Query: 541 KSFGRDRLYPISNKFRDHISEE 562 KSFGRDRLYPISNKFRDHISEE Sbjct: 541 KSFGRDRLYPISNKFRDHISEE 562 >gi|315122406|ref|YP_004062895.1| NAD synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495808|gb|ADR52407.1| NAD synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 561 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 429/558 (76%), Positives = 493/558 (88%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M LKIAIAQLNP VGD++GNIAKAR+AREEANRQG DLI+FTELFISGYP EDL+ K+ Sbjct: 1 MSIHLKIAIAQLNPTVGDVSGNIAKARQAREEANRQGADLIIFTELFISGYPAEDLILKE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 SFIQAC + TLK DT D GAGI++GFPRQDQEG+ NSV ILDAG I+++RDKI+LPNY Sbjct: 61 SFIQACYDGMLTLKDDTRDNGAGIIIGFPRQDQEGIFNSVAILDAGKIVSIRDKIHLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +EFHEKRTFISG +ND +VFRD +GILICEDIWKNSNIC+HLKKQGA+ L +LNASPY Sbjct: 121 NEFHEKRTFISGNTNDIVVFRDNPIGILICEDIWKNSNICRHLKKQGAKILLTLNASPYC 180 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NKLK RHEI++ QISHV++PI+YVNQVGGQDELIFDGASFCF+G +QLAFQMKHF EQN Sbjct: 181 RNKLKTRHEIISTQISHVNIPIVYVNQVGGQDELIFDGASFCFNGDRQLAFQMKHFEEQN 240 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T+W+YD++ S N +SD S S +YI EEE DYNACV+ LRDYV+KNNFHKVIIGLS Sbjct: 241 LITQWYYDKKSSSLNCISDYSQSKIYIFPTEEETDYNACVVGLRDYVKKNNFHKVIIGLS 300 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALCA IAVDALGKENVQTIMLPYKYTS +SLEDAAACAK+L C+YDVLPIHDLV+ Sbjct: 301 GGIDSALCATIAVDALGKENVQTIMLPYKYTSNESLEDAAACAKSLDCRYDVLPIHDLVD 360 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 HFFS+MSQFLQEEPSGIVAENIQSRIRGNILM LSN S+AMLLTT+NKSEIS+GYGTLYG Sbjct: 361 HFFSIMSQFLQEEPSGIVAENIQSRIRGNILMTLSNKSEAMLLTTNNKSEISIGYGTLYG 420 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DMSGGFNPLKDLYKT+V++LA WRN+H I GLGP EVIPP ILEK+PSAELRP+Q D+ Sbjct: 421 DMSGGFNPLKDLYKTKVYKLAYWRNAHCIPCGLGPFKEVIPPRILEKAPSAELRPNQIDE 480 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 +SLPPY ILD+II+ IVEN+ES N ++Y+ ET+RY+E+LLY SEYKRRQ+P GTKIT+ Sbjct: 481 DSLPPYAILDNIIEDIVENKESLKNTKKKYSTETIRYIENLLYRSEYKRRQSPPGTKITS 540 Query: 541 KSFGRDRLYPISNKFRDH 558 KSFGRDRLYPISNKFRD Sbjct: 541 KSFGRDRLYPISNKFRDQ 558 >gi|241204941|ref|YP_002976037.1| NAD synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858831|gb|ACS56498.1| NAD+ synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 559 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 311/555 (56%), Positives = 395/555 (71%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLAKAREARTDAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++ L +DT DGG G+++GFPRQD+ G NSV +LDAG +IAVRDKI+LPNY EF Sbjct: 71 ACWKAVENLAADTADGGPGVIIGFPRQDETGRYNSVAVLDAGKVIAVRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +R+GI ICEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFDQGAMPGPVNFRGVRIGIPICEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSQFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + +IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGEDGWHC-----AEGPMAHIPESEEAD-YRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CA+ALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCARALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALASLFEGTDSGITEENLQSRARGVILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ ++ WRN + LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYAISRWRNENVPPGALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + + ++ TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|86357986|ref|YP_469878.1| NAD synthetase [Rhizobium etli CFN 42] gi|86282088|gb|ABC91151.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli CFN 42] Length = 559 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 315/555 (56%), Positives = 394/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLAKAREARADAGREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+V+GFPRQDQ G NSV +LD G ++AVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTADGGPGVVIGFPRQDQTGRYNSVAVLDGGKVVAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F+ G P+ FR +RLGI ICEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFVQGAMPGPVNFRGVRLGIPICEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSQFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGEAGWHC-----AEGPMARIPEDEEAD-YRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+C AIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICTAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSNLFEGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN + LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNENVPPGALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + + ++ TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|222148504|ref|YP_002549461.1| NAD synthetase [Agrobacterium vitis S4] gi|221735490|gb|ACM36453.1| NAD synthetase [Agrobacterium vitis S4] Length = 559 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 307/556 (55%), Positives = 396/556 (71%), Gaps = 7/556 (1%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L+IA+AQ NP VGD+ GN++ AR AR +A G DL+L +ELFISGYPPEDLV K +F+ Sbjct: 10 TLRIAVAQFNPTVGDVVGNLSLARTARAKAASLGADLLLLSELFISGYPPEDLVLKPAFL 69 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 QAC +A++ L +DT DGG G+++GFPRQ +G NSV I+D G I+ +RDKI+LPNY EF Sbjct: 70 QACKAAVEELAADTADGGPGVIIGFPRQGDKGRHNSVAIIDGGKILGLRDKIDLPNYGEF 129 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F+ G P+ FR +RLG+ ICE+IW + +C+ L + GAE L N SPYYH K Sbjct: 130 DEKRVFVEGDMPGPVNFRGVRLGVPICEEIWNDLGVCETLAESGAEILLVPNGSPYYHGK 189 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 L+ R+++V Q+ LP+++ NQVGGQDEL+FDGASFCF+ + LAFQM F E +T Sbjct: 190 LEVRYQVVLRQVIESGLPLVFANQVGGQDELVFDGASFCFNADKTLAFQMPQFEESIVLT 249 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 W + + IP EE Y AC+L RDYV KN F V++GLSGGI Sbjct: 250 TWTREADGWRC-----APGEVSAIPEGEEAD-YRACMLGFRDYVNKNGFKSVVLGLSGGI 303 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSA+CAA+AVDALG E V+TIMLPY+YTS +S +DAA CAKALGC YD++PI + V F Sbjct: 304 DSAICAAMAVDALGHERVRTIMLPYRYTSEESFKDAADCAKALGCHYDIVPISEPVEGFL 363 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+ Sbjct: 364 ASLADMFEGTESGITEENLQSRTRGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGDMN 423 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGFNP+KDLYK QV+ L++WRN+H LGP EVIP +I+ K+PSAELRP Q DQ+SL Sbjct: 424 GGFNPIKDLYKMQVYALSAWRNAHVPVGALGPAGEVIPANIIAKAPSAELRPDQKDQDSL 483 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPYP+LDDI++ +VE E S + ++ TV VEHLLY +EYKRRQ+ G KIT K+ Sbjct: 484 PPYPVLDDILECLVEKEMSVDEILGRGHDIATVHRVEHLLYLAEYKRRQSAPGVKITKKN 543 Query: 543 FGRDRLYPISNKFRDH 558 FGRDR YPI+N+FRD Sbjct: 544 FGRDRRYPITNRFRDR 559 >gi|163759637|ref|ZP_02166722.1| putative glutamine-dependent NAD(+) synthetase [Hoeflea phototrophica DFL-43] gi|162283234|gb|EDQ33520.1| putative glutamine-dependent NAD(+) synthetase [Hoeflea phototrophica DFL-43] Length = 562 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 295/558 (52%), Positives = 381/558 (68%), Gaps = 6/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L+IA+AQLNP VGD+AGN+AKAR AR +A+R G D++LFTELFI GYPPEDLV K + Sbjct: 10 TDTLRIAVAQLNPTVGDVAGNLAKAREARADAHRHGADIVLFTELFIVGYPPEDLVLKPA 69 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I++C A++ L +DT DGG +++G+PR D NSV +LD G ++ RDK++LPNY Sbjct: 70 LIRSCLKAVNELAADTADGGPAVIIGYPRSDDGKRHNSVAVLDGGKLVTSRDKVDLPNYG 129 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ R +RLGI ICEDIW + +C+ L + GAE L N SPYY Sbjct: 130 EFDEKRVFDVGEMPGPVAIRGVRLGIPICEDIWGDLGVCETLAESGAEILLVPNGSPYYR 189 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ RH++V Q+ LP+++ NQVGGQDEL+FDGASF + + L FQM F E Sbjct: 190 GKVDVRHQVVLRQVIESGLPMVFANQVGGQDELVFDGASFAMNADKSLGFQMSQFEETVS 249 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + + +P EE Y AC+L LRDYV KN F V++GLSG Sbjct: 250 IVTFKR----QDDGTWRCKPGPMSVVPEGEEAD-YRACMLGLRDYVNKNGFRNVVLGLSG 304 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSALCAA+AVDALG+E V+T+MLPY+YTS S DA ACA+ALGC YD + I + V Sbjct: 305 GIDSALCAALAVDALGEERVRTVMLPYRYTSESSFTDAEACARALGCHYDTVAIEEPVQG 364 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F S + + + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 365 FLSALGEMFEGTDEGITEENLQSRARGVILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 424 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KDLYK QV+ L+ WRN+H LGP EVIP +I+ K+PSAELRP QTDQ+ Sbjct: 425 MNGGFNPIKDLYKLQVYALSRWRNAHVPPGALGPSGEVIPVNIINKAPSAELRPDQTDQD 484 Query: 482 SLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LDDI++ +VE+E + ++ TV +EHLLY +EYKRRQ+ G KIT Sbjct: 485 SLPPYEVLDDILECLVEHEMGVEEIVARGHDIATVHRIEHLLYIAEYKRRQSAPGVKITR 544 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N++RD Sbjct: 545 KNFGRDRRYPITNRYRDR 562 >gi|227822241|ref|YP_002826212.1| NAD synthetase [Sinorhizobium fredii NGR234] gi|227341241|gb|ACP25459.1| glutamine-dependent NAD(+) synthetase [Sinorhizobium fredii NGR234] Length = 560 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 319/557 (57%), Positives = 403/557 (72%), Gaps = 7/557 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 KL+IA+AQLNP VGDIAGN+A+AR AR +A RQG DL+LFTELFISGYPPEDLV K +F Sbjct: 9 SKLRIAVAQLNPTVGDIAGNMARAREARADAARQGADLVLFTELFISGYPPEDLVLKPAF 68 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + AC A++ L ++T DGG G+++GFPRQ NSV +LDAG I+AVRDK++LPNY E Sbjct: 69 LAACLRAVEKLAAETADGGPGVIIGFPRQASLQRHNSVAVLDAGKIVAVRDKVDLPNYGE 128 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F +G P+ FR IR+GI ICEDIW +C+ LK+ GAE L S N SPYY Sbjct: 129 FDEKRVFDAGEMPGPVNFRGIRIGIPICEDIWGELGVCETLKESGAEILLSPNGSPYYRG 188 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K+ RH+IV Q+ LP+IY NQ+GGQDEL+FDGASF F+ + LAFQM F E + Sbjct: 189 KVDVRHQIVLKQVIETGLPMIYANQLGGQDELVFDGASFGFNADKSLAFQMSQFEEALSI 248 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +EW + S +P +E Y AC+L LRDYV KN F V++GLSGG Sbjct: 249 SEW-----ARAEDGWVSTSGLQSRLPESDEAD-YRACMLGLRDYVNKNGFKNVVLGLSGG 302 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+CAA+AVDALG+E V+TIMLPY+YTS +SL+DA ACAKALGC YDV+ I + V F Sbjct: 303 IDSAICAALAVDALGEERVRTIMLPYRYTSQESLKDAEACAKALGCYYDVVAIEEPVEGF 362 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM Sbjct: 363 LNALADTFEGTESGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDM 422 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGFNP+KDLYK QV+ L+ WRN LGP EVIP +I++K+PSAELRP+QTDQ+S Sbjct: 423 NGGFNPIKDLYKMQVYGLSRWRNGAVPPGALGPSGEVIPQNIIDKAPSAELRPNQTDQDS 482 Query: 483 LPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPYP+LDDI++ +VE E S + +++ TV +EHLLY +EYKRRQ+ G KIT K Sbjct: 483 LPPYPVLDDILECLVERELSTEEIVARGHDEATVHRIEHLLYIAEYKRRQSAPGVKITKK 542 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N+FRD Sbjct: 543 NFGRDRRYPITNRFRDR 559 >gi|218675144|ref|ZP_03524813.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli GR56] Length = 559 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 314/555 (56%), Positives = 394/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+ GN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVTGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQD+ G NSV +LD G +IAVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTADGGPGVIIGFPRQDENGRYNSVAVLDGGKVIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI ICEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFHQGAMPGPVNFRGVRLGIPICEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADRSLAFQMSEFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGESGWHC-----AEGPMARIPEGEEAD-YRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFEGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN + + LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNENVPPTALGPSGEVIPLNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + + ++ TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|116252435|ref|YP_768273.1| NAD synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|115257083|emb|CAK08177.1| putative glutamine-dependent nad(+) synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 559 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 310/555 (55%), Positives = 393/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L ++T DGG G+++GFPRQD G NSV +LD G +IAVRDKI+LPNY EF Sbjct: 71 ACWKAVESLAAETADGGPGVIIGFPRQDDTGRYNSVAVLDGGKVIAVRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +R+GI ICEDIW + +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFDQGAMPGPVNFRGVRIGIPICEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLRQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSQFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W +IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGDSGWHC-----AEGPMAHIPESEEAD-YRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CA+ALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCARALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALASLFEGTDSGITEENLQSRARGVILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ L+ WRN + LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALSRWRNENVPPGALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + + ++ TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|307946670|ref|ZP_07662005.1| NAD(+) synthase (glutamine-hydrolyzing) [Roseibium sp. TrichSKD4] gi|307770334|gb|EFO29560.1| NAD(+) synthase (glutamine-hydrolyzing) [Roseibium sp. TrichSKD4] Length = 555 Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 279/558 (50%), Positives = 375/558 (67%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +++IA+AQLNP VGD+ GN K R+AR+EA + G DL+L EL +SGYPPEDLV K + Sbjct: 3 TDRIRIAVAQLNPTVGDLTGNADKVRKARDEAAQLGADLVLCPELTLSGYPPEDLVLKPA 62 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+Q C + L S+T G G+++G P + + N+V ++D G I ++R K +LPNYS Sbjct: 63 FVQRCMDLVSELASETKGEGPGLLIGSPWAEDGQLYNAVALVDDGEIKSIRYKYDLPNYS 122 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F +G P+ FR +RLG+ ICEDIW + +C+ L + GAE L N SPY+H Sbjct: 123 VFDEKRVFAAGPLPGPMDFRGVRLGVPICEDIWND-EVCECLAETGAELLLVPNGSPYWH 181 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 N+ ++R ++V ++ LP+IY NQ+GGQDEL+FDG SF + LAFQM F+ Sbjct: 182 NRAEERLQVVVSRVVESDLPLIYCNQIGGQDELVFDGGSFGLQANRTLAFQMSQFTSDLA 241 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +TEW + +S +P + + ACV LRDYV KN F V++GLSG Sbjct: 242 VTEW----VKGEDEIWVCESGPKAALPDLDTAN-WQACVRGLRDYVTKNGFPGVVLGLSG 296 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+AVDALG + V IMLPY+YTS +S++DAA CA ALG +YD +PI + V Sbjct: 297 GIDSAICAAMAVDALGADKVHAIMLPYRYTSEESIKDAAECAAALGIRYDTVPIEEPVLG 356 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F +++S S EN+QSR RG ILMA+SN M++TT NKSE+SVGY TLYGD Sbjct: 357 FTNVLSDLFAGTKSDTTEENLQSRARGVILMAVSNKFGHMVVTTGNKSEMSVGYATLYGD 416 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GG+NP+KDLYKTQV+ LA WRN + LGP EVIP +I+ K P+AELR +QTDQ+ Sbjct: 417 MNGGYNPIKDLYKTQVYHLADWRNHNRPDGMLGPEGEVIPTNIITKVPTAELRENQTDQD 476 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LDDI+ +VE E S + ++ + VEHLLY +EYKRRQAP G KIT+ Sbjct: 477 SLPPYDVLDDILNCLVEEEMSVNEIEARGHDKALIHKVEHLLYIAEYKRRQAPPGVKITS 536 Query: 541 KSFGRDRLYPISNKFRDH 558 ++FG+DR YPI+N+FRD Sbjct: 537 RNFGKDRRYPITNRFRDR 554 >gi|222086207|ref|YP_002544739.1| NAD(+) synthase (glutamine-hydrolysing) protein [Agrobacterium radiobacter K84] gi|221723655|gb|ACM26811.1| NAD(+) synthase (glutamine-hydrolysing) protein [Agrobacterium radiobacter K84] Length = 559 Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 305/558 (54%), Positives = 398/558 (71%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++IA+AQLNP VGD++GN+ KAR AR EA R+G L+LFTELFISGYPPEDLV K + Sbjct: 8 TQTIRIAVAQLNPTVGDVSGNLVKAREARAEAAREGAQLVLFTELFISGYPPEDLVLKPA 67 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+AC A+++L +DT DGG G+++GFPRQD+ G NSV ++D G +I +RDK++LPNY Sbjct: 68 FIRACWKAVESLAADTADGGPGVIIGFPRQDETGRYNSVAVIDGGKVIFIRDKVDLPNYG 127 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 EF EKR F G P+ FR +R+GI ICE+IW + IC+ L + GAE L N SPYY Sbjct: 128 EFDEKRVFDEGTIAGPVNFRGVRIGIPICEEIWNDLGICETLAESGAEILLVPNGSPYYR 187 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ R+++V Q+ LP+++ QVGGQDE +FDGASF F+ + LAFQM F Sbjct: 188 GKVDVRYQVVLRQVIESGLPLVFAAQVGGQDEYVFDGASFAFNADKSLAFQMSQFETALA 247 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +T W + + +IP EE Y AC+L RDYV KN F V++GLSG Sbjct: 248 VTTWKKNGDGWHCS-----EGPMAHIPEGEEAD-YRACLLGFRDYVNKNGFKSVVLGLSG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI + V Sbjct: 302 GIDSAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEEPVTG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F S ++ + SGI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 362 FTSALADLFEGTESGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KDLYK QV+ L+ WRN H LGP EVIP +I++K+PSAELRP+QTDQ+ Sbjct: 422 MNGGFNPIKDLYKMQVYALSRWRNLHVPPGALGPSGEVIPYNIIDKAPSAELRPNQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPYP LDDI++ +VE E + + ++ TV +EHLLY +EYKRRQ+ G +IT Sbjct: 482 SLPPYPALDDILECLVEKEMAVDEIVARGHDVATVHRIEHLLYLAEYKRRQSAPGVRITT 541 Query: 541 KSFGRDRLYPISNKFRDH 558 K+FGRDR YPI+N+FRD Sbjct: 542 KNFGRDRRYPITNRFRDR 559 >gi|327190628|gb|EGE57716.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli CNPAF512] Length = 559 Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 316/555 (56%), Positives = 393/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+ GN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVTGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQD+ G NSV +LD G +IAVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTVDGGPGVIIGFPRQDENGRYNSVAVLDGGKVIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G PI FR IRLGI ICEDIW +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFHQGAMPGPINFRGIRLGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSEFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGESGWHC-----AEGPMARIPEGEEAD-YRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFEGTDSGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ L+ WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALSRWRNENVPPSALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + + ++ TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|190892049|ref|YP_001978591.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli CIAT 652] gi|190697328|gb|ACE91413.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli CIAT 652] Length = 559 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 314/555 (56%), Positives = 392/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+ KAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLTKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQD+ G NSV +LD G +IAVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTVDGGPGVIIGFPRQDENGRYNSVAVLDGGKVIAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR IRLGI ICEDIW +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFHQGAMPGPVNFRGIRLGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADKSLAFQMSEFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGESGWHC-----AEGPMARIPEGEEAD-YRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFEGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ L+ WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALSRWRNENVPPSALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 YP+LDDI++ +VE E + + ++ TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 AYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|15965599|ref|NP_385952.1| NAD synthetase [Sinorhizobium meliloti 1021] gi|307302719|ref|ZP_07582475.1| NAD+ synthetase [Sinorhizobium meliloti BL225C] gi|15074780|emb|CAC46425.1| Putative NH3-dependent NAD+ synthetase [Sinorhizobium meliloti 1021] gi|306903083|gb|EFN33674.1| NAD+ synthetase [Sinorhizobium meliloti BL225C] Length = 560 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 310/557 (55%), Positives = 395/557 (70%), Gaps = 7/557 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 L+IA+AQLNP VGDIAGN+AKAR AR A R+G DL+L TELFISGYPPEDLV K +F Sbjct: 9 STLRIAVAQLNPTVGDIAGNVAKAREARTAAAREGADLLLLTELFISGYPPEDLVLKPAF 68 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 ++AC A++ L ++T DGG G+V+GFPRQ NSV +LD G +IA+RDK++LPNY E Sbjct: 69 LKACEQAVEKLAAETADGGPGVVIGFPRQAAGLRHNSVAVLDGGRVIAIRDKVDLPNYGE 128 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F +G P+ FR +R+GI +CEDIW + +C+ L + GAE L S N SPYY Sbjct: 129 FDEKRVFDAGEMPGPVNFRGVRIGIPVCEDIWGDLGVCETLAESGAEILLSPNGSPYYRG 188 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K+ RH++V Q+ LP+IY NQ+GGQDEL+FDGASF F+ + LAFQM F E + Sbjct: 189 KVDVRHQVVLRQVIETGLPMIYANQLGGQDELVFDGASFAFNADKSLAFQMSQFEEAVAV 248 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +EW + IP EE Y AC+L RDYV KN F V++GLSGG Sbjct: 249 SEWKRGA-----GGWISANGLKSRIPEGEEAD-YRACMLGFRDYVNKNGFRNVVLGLSGG 302 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+C A+AVDALG+E V+T+MLPY+YTS +SL DA ACAKALGC+YD++ I + V F Sbjct: 303 IDSAICTALAVDALGEERVRTVMLPYRYTSRESLRDAEACAKALGCRYDIVAIEEPVEGF 362 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S ++ + +GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM Sbjct: 363 LSALADTFEGTEAGITEENLQSRTRGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDM 422 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGFNP+KDLYK QV+ LA WRN LGP EVIP +I++K+PSAELRP QTDQ+S Sbjct: 423 NGGFNPIKDLYKMQVYALARWRNGTVPPGALGPSGEVIPQNIIDKAPSAELRPDQTDQDS 482 Query: 483 LPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPYP+LDDI++ +VE E S + + + TV +EHLLY +EYKRRQ+ G KIT K Sbjct: 483 LPPYPVLDDILECLVEKEMSTEEIVARGHEEATVHRIEHLLYIAEYKRRQSAPGVKITRK 542 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N+FRD Sbjct: 543 NFGRDRRYPITNRFRDR 559 >gi|307318567|ref|ZP_07598001.1| NAD+ synthetase [Sinorhizobium meliloti AK83] gi|306895907|gb|EFN26659.1| NAD+ synthetase [Sinorhizobium meliloti AK83] Length = 560 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 309/557 (55%), Positives = 395/557 (70%), Gaps = 7/557 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 L+IA+AQLNP VGDIAGN+AKAR AR A R+G DL+L TELFISGYPPEDLV K +F Sbjct: 9 STLRIAVAQLNPTVGDIAGNVAKAREARTAAAREGADLLLLTELFISGYPPEDLVLKPAF 68 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 ++AC A++ L ++T DGG G+V+GFPRQ NSV +LD G +IA+RDK++LPNY E Sbjct: 69 LKACEQAVEKLAAETADGGPGVVIGFPRQAAGLRHNSVAVLDGGRVIAIRDKVDLPNYGE 128 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F +G P+ FR +R+GI +CEDIW + +C+ L + GAE L S N SPYY Sbjct: 129 FDEKRVFDAGEMPGPVNFRGVRIGIPVCEDIWGDLGVCETLAESGAEILLSPNGSPYYRG 188 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K+ RH++V Q+ LP+IY NQ+GGQDEL+FDGASF F+ + LAFQM F E + Sbjct: 189 KVDVRHQVVLRQVIETGLPMIYANQLGGQDELVFDGASFAFNADKSLAFQMSQFEEAVAV 248 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +EW + IP EE Y AC+L RDYV KN F V++GLSGG Sbjct: 249 SEWKRGA-----GGWISANGLKSRIPEGEEAD-YRACMLGFRDYVNKNGFRNVVLGLSGG 302 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+C A+AVDALG+E V+T+MLPY+YTS +SL DA ACAKALGC+Y+++ I + V F Sbjct: 303 IDSAICTALAVDALGEERVRTVMLPYRYTSRESLRDAEACAKALGCRYNIVAIEEPVEGF 362 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S ++ + +GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM Sbjct: 363 LSALADTFEGTEAGITEENLQSRTRGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDM 422 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGFNP+KDLYK QV+ LA WRN LGP EVIP +I++K+PSAELRP QTDQ+S Sbjct: 423 NGGFNPIKDLYKMQVYALARWRNGTVPPGALGPSGEVIPQNIIDKAPSAELRPDQTDQDS 482 Query: 483 LPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPYP+LDDI++ +VE E S + + + TV +EHLLY +EYKRRQ+ G KIT K Sbjct: 483 LPPYPVLDDILECLVEKEMSTEEIVARGHEEATVHRIEHLLYIAEYKRRQSAPGVKITRK 542 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N+FRD Sbjct: 543 NFGRDRRYPITNRFRDR 559 >gi|304391830|ref|ZP_07373772.1| NAD(+) synthase (glutamine-hydrolyzing) [Ahrensia sp. R2A130] gi|303296059|gb|EFL90417.1| NAD(+) synthase (glutamine-hydrolyzing) [Ahrensia sp. R2A130] Length = 556 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 281/559 (50%), Positives = 379/559 (67%), Gaps = 9/559 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L+IAIAQ+NP VGD++GN R AR +A RQG DL++FTELFISGY PEDLV K + Sbjct: 5 TDTLRIAIAQMNPTVGDVSGNTDLVREARSDAARQGADLVVFTELFISGYSPEDLVLKPA 64 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ C A++ L +T DGG ++VG P Q + G+ NSV +LD G I +R K++LPNY Sbjct: 65 FIKRCREAVEALAEETKDGGPAVLVGVPWQAETGLHNSVALLDGGAIK-LRHKVDLPNYG 123 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F G P+ FR +RLG+ ICEDIW + ++C+ L + G+E L N SPYY Sbjct: 124 VFDEKRVFAQGPMPGPLNFRGVRLGVPICEDIWGDLDVCETLAESGSEILIVPNGSPYYR 183 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+ R+++V Q+ LP+++ NQ+GGQDEL+FDG SF + + + QM F Sbjct: 184 QKVDVRYQVVMRQVIVTELPMLFANQLGGQDELVFDGGSFVMNADKSIPVQMNQFESSVA 243 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +T W + + D +P + E D+ ACVL LRDYV+KN F V++GLSG Sbjct: 244 LTTWRRGS-----DGWACDRGVQTRLPDVQ-ECDWRACVLGLRDYVEKNGFKNVVLGLSG 297 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+ AA++VDALG+E V+ +MLPY+YTS +SL+DA CA ALG +Y+ +PI V Sbjct: 298 GIDSAIVAAMSVDALGEERVRCVMLPYRYTSDESLKDAQDCANALGVRYETIPIEPPVQG 357 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F +S ++ G+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGD Sbjct: 358 FLDTLSDVFEDTAEGVTEENLQSRARGVILMAISNKFGSMVVTTGNKSEMSVGYATLYGD 417 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KDLYK QV+ L+ WRN H LGP EVIP +I++K+P+AELR +QTDQ+ Sbjct: 418 MNGGFNPIKDLYKMQVYGLSDWRNKHMPPDCLGPSGEVIPQNIIDKAPTAELRENQTDQD 477 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQ--EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 SLP YP+LD I++ +VENE S + + + TV +EHLLY +EYKRRQA G KIT Sbjct: 478 SLPEYPVLDAILESLVENEMSVDDIVEKFGFERATVERMEHLLYIAEYKRRQAAPGVKIT 537 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++FGR+R YPI+N+FRD Sbjct: 538 RRAFGRERRYPITNRFRDR 556 >gi|150396775|ref|YP_001327242.1| NAD synthetase [Sinorhizobium medicae WSM419] gi|150028290|gb|ABR60407.1| NAD+ synthetase [Sinorhizobium medicae WSM419] Length = 560 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 312/557 (56%), Positives = 397/557 (71%), Gaps = 7/557 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 L+IA+AQLNP VGDIAGN+ KAR AR A R+G DL+LFTELF+SGYPPEDLV K +F Sbjct: 9 STLRIAVAQLNPTVGDIAGNMTKAREARAAAAREGADLLLFTELFLSGYPPEDLVLKPAF 68 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + AC A++ L ++T DGG GIV+GFPRQ NSV +LD G IIAVRDK++LPNY E Sbjct: 69 LSACEQAVEKLAAETADGGPGIVIGFPRQAAALRHNSVAVLDGGKIIAVRDKVDLPNYGE 128 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F +G P+ FR +R+GI +CEDIW + +C+ L + GAE L S N SPYY Sbjct: 129 FDEKRVFDAGEMPGPVNFRGVRIGIPVCEDIWGDLGVCETLAESGAEILLSPNGSPYYRG 188 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 KL RH++V Q+ LP+IY NQ+GGQDEL+FDGASF F+ + LAFQM F E + Sbjct: 189 KLDVRHQVVLRQVIETGLPMIYANQLGGQDELVFDGASFAFNADKSLAFQMSQFEEAVAV 248 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +EW + + +P EE Y AC+L RDYV KN F V++GLSGG Sbjct: 249 SEWRRGA-----DGWVSGNGLKSRVPEGEEAD-YRACMLGFRDYVNKNGFRNVVLGLSGG 302 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+C A+AVDALG+E V+T+MLPY+YTS +SL+DA ACA+ALGC+YD++ I + V F Sbjct: 303 IDSAICTALAVDALGEERVRTVMLPYRYTSRESLQDAEACARALGCRYDIVAIEEPVEGF 362 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S +S + +GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM Sbjct: 363 LSALSDMFEGTEAGITEENLQSRTRGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDM 422 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGFNP+KDLYK QV+ LA WRN LGP EVIP +I++K+PSAELRP QTDQ+S Sbjct: 423 NGGFNPIKDLYKMQVYALARWRNGTVPPGALGPSGEVIPQNIIDKAPSAELRPDQTDQDS 482 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPYP+LDDI++ +VE E S + + + + TV +EHLLY +EYKRRQ+ G KIT K Sbjct: 483 LPPYPVLDDILECLVEKEMSTEDVVARGHEEATVHRIEHLLYIAEYKRRQSAPGVKITRK 542 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N+FRD Sbjct: 543 NFGRDRRYPITNRFRDR 559 >gi|261317648|ref|ZP_05956845.1| NAD+ synthetase [Brucella pinnipedialis B2/94] gi|265988683|ref|ZP_06101240.1| NAD+ synthetase [Brucella pinnipedialis M292/94/1] gi|261296871|gb|EEY00368.1| NAD+ synthetase [Brucella pinnipedialis B2/94] gi|264660880|gb|EEZ31141.1| NAD+ synthetase [Brucella pinnipedialis M292/94/1] Length = 559 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 387/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 11 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 71 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW ++ + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELDVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 191 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 305 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|161618967|ref|YP_001592854.1| NAD synthetase [Brucella canis ATCC 23365] gi|163843283|ref|YP_001627687.1| NAD synthetase [Brucella suis ATCC 23445] gi|225627493|ref|ZP_03785530.1| NAD+ synthetase [Brucella ceti str. Cudo] gi|260566446|ref|ZP_05836916.1| NAD+ synthase [Brucella suis bv. 4 str. 40] gi|261218645|ref|ZP_05932926.1| NAD+ synthetase [Brucella ceti M13/05/1] gi|261222183|ref|ZP_05936464.1| NAD+ synthetase [Brucella ceti B1/94] gi|261314259|ref|ZP_05953456.1| NAD+ synthetase [Brucella pinnipedialis M163/99/10] gi|261321857|ref|ZP_05961054.1| NAD+ synthetase [Brucella ceti M644/93/1] gi|261752317|ref|ZP_05996026.1| NAD+ synthetase [Brucella suis bv. 5 str. 513] gi|261754975|ref|ZP_05998684.1| NAD+ synthetase [Brucella suis bv. 3 str. 686] gi|261758202|ref|ZP_06001911.1| NAD(+) synthase [Brucella sp. F5/99] gi|265998147|ref|ZP_06110704.1| NAD+ synthetase [Brucella ceti M490/95/1] gi|294852395|ref|ZP_06793068.1| NAD+ synthase [Brucella sp. NVSL 07-0026] gi|161335778|gb|ABX62083.1| NAD+ synthetase [Brucella canis ATCC 23365] gi|163674006|gb|ABY38117.1| NAD+ synthetase [Brucella suis ATCC 23445] gi|225617498|gb|EEH14543.1| NAD+ synthetase [Brucella ceti str. Cudo] gi|260155964|gb|EEW91044.1| NAD+ synthase [Brucella suis bv. 4 str. 40] gi|260920767|gb|EEX87420.1| NAD+ synthetase [Brucella ceti B1/94] gi|260923734|gb|EEX90302.1| NAD+ synthetase [Brucella ceti M13/05/1] gi|261294547|gb|EEX98043.1| NAD+ synthetase [Brucella ceti M644/93/1] gi|261303285|gb|EEY06782.1| NAD+ synthetase [Brucella pinnipedialis M163/99/10] gi|261738186|gb|EEY26182.1| NAD(+) synthase [Brucella sp. F5/99] gi|261742070|gb|EEY29996.1| NAD+ synthetase [Brucella suis bv. 5 str. 513] gi|261744728|gb|EEY32654.1| NAD+ synthetase [Brucella suis bv. 3 str. 686] gi|262552615|gb|EEZ08605.1| NAD+ synthetase [Brucella ceti M490/95/1] gi|294820984|gb|EFG37983.1| NAD+ synthase [Brucella sp. NVSL 07-0026] Length = 559 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 11 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 71 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 191 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 305 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|153009427|ref|YP_001370642.1| NAD synthetase [Ochrobactrum anthropi ATCC 49188] gi|151561315|gb|ABS14813.1| NAD+ synthetase [Ochrobactrum anthropi ATCC 49188] Length = 559 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 304/555 (54%), Positives = 391/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP++GDIAGN+ KAR AR EA R DLILFTELFISGYPPEDLV K SF+ Sbjct: 11 LRIAVAQLNPIMGDIAGNLTKARAARAEAARMKADLILFTELFISGYPPEDLVLKPSFLA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L SDT DGG G+++G P + G+ NS+ +LD G IIA R K++LPNY EF Sbjct: 71 ACEKAVRALASDTADGGPGVIIGTPLSRESGLHNSIAVLDGGEIIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F +G P+ FR +R+GI ICEDIW + + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFQAGPMPGPVNFRGVRIGIPICEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LP++Y NQVGGQDEL+FDG SF F+ + L Q+ F EQ +T Sbjct: 191 DRRHQVVLKQVIETELPMVYANQVGGQDELVFDGGSFAFNTDRSLCLQLPQFEEQITLTV 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + + I + EADY+AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WRRENDGWRCE------EGEKAILPEGLEADYSACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ IMLPY+YTS +SL+DAA CAKALG +YD++PI V F Sbjct: 305 SAICAALGVDALGKDRVRCIMLPYRYTSDESLKDAADCAKALGVRYDIVPISAPVEGFLE 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALHPLFEGTESGVTEENLQSRARGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ ++ WRNSH LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYAMSEWRNSHVPNGALGPSGEVIPHNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S ++ + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVENEMSNTEIAERGHPLETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|218663273|ref|ZP_03519203.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli IE4771] Length = 557 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 313/551 (56%), Positives = 391/551 (70%), Gaps = 7/551 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPTVGDVAGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+V+GFPRQD+ G NSV +LD G ++AVRDK++LPNY EF Sbjct: 71 ACWKAVESLAADTADGGPGVVIGFPRQDETGRYNSVAVLDGGKVVAVRDKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI ICEDIW +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFHQGAMPGPVNFRGVRLGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADRSLAFQMSEFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGESGWHC-----AEGPMARIPEDEEAD-YRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAAIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICAAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFEGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNENVPPSALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E + + ++ TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMAVEEIVARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNK 554 GRDR YPI+N+ Sbjct: 545 GRDRRYPITNR 555 >gi|189024180|ref|YP_001934948.1| NAD synthetase [Brucella abortus S19] gi|237815439|ref|ZP_04594437.1| NAD+ synthetase [Brucella abortus str. 2308 A] gi|260545314|ref|ZP_05821055.1| NAD+ synthetase [Brucella abortus NCTC 8038] gi|260754749|ref|ZP_05867097.1| NAD+ synthetase [Brucella abortus bv. 6 str. 870] gi|260757972|ref|ZP_05870320.1| NAD+ synthetase [Brucella abortus bv. 4 str. 292] gi|260761795|ref|ZP_05874138.1| NAD+ synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260883770|ref|ZP_05895384.1| NAD+ synthetase [Brucella abortus bv. 9 str. C68] gi|297248338|ref|ZP_06932056.1| NAD+ synthase [Brucella abortus bv. 5 str. B3196] gi|189019752|gb|ACD72474.1| NAD(+) synthase [Brucella abortus S19] gi|237790276|gb|EEP64486.1| NAD+ synthetase [Brucella abortus str. 2308 A] gi|260096721|gb|EEW80596.1| NAD+ synthetase [Brucella abortus NCTC 8038] gi|260668290|gb|EEX55230.1| NAD+ synthetase [Brucella abortus bv. 4 str. 292] gi|260672227|gb|EEX59048.1| NAD+ synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674857|gb|EEX61678.1| NAD+ synthetase [Brucella abortus bv. 6 str. 870] gi|260873298|gb|EEX80367.1| NAD+ synthetase [Brucella abortus bv. 9 str. C68] gi|297175507|gb|EFH34854.1| NAD+ synthase [Brucella abortus bv. 5 str. B3196] Length = 559 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 302/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 11 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 71 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQD+L+FDG SF F+ + L QM F+EQ +TE Sbjct: 191 DRRHQVVLKQVIETGLPIVYANQVGGQDDLVFDGGSFVFNADKSLCLQMPQFAEQIALTE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 305 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|254710099|ref|ZP_05171910.1| NAD synthetase [Brucella pinnipedialis B2/94] gi|256031595|ref|ZP_05445209.1| NAD synthetase [Brucella pinnipedialis M292/94/1] Length = 550 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 387/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW ++ + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELDVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|17987252|ref|NP_539886.1| NAD synthetase [Brucella melitensis bv. 1 str. 16M] gi|225852520|ref|YP_002732753.1| NAD synthetase [Brucella melitensis ATCC 23457] gi|260564019|ref|ZP_05834505.1| NAD+ synthase [Brucella melitensis bv. 1 str. 16M] gi|265991097|ref|ZP_06103654.1| NAD+ synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|265999470|ref|ZP_05466523.2| NAD(+) synthase [Brucella melitensis bv. 2 str. 63/9] gi|17982927|gb|AAL52150.1| glutamine-dependent nad(+) synthetase [Brucella melitensis bv. 1 str. 16M] gi|225640885|gb|ACO00799.1| NAD+ synthetase [Brucella melitensis ATCC 23457] gi|260154035|gb|EEW89127.1| NAD+ synthase [Brucella melitensis bv. 1 str. 16M] gi|263001881|gb|EEZ14456.1| NAD+ synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|263094135|gb|EEZ18057.1| NAD(+) synthase [Brucella melitensis bv. 2 str. 63/9] gi|326538745|gb|ADZ86960.1| NAD+ synthetase [Brucella melitensis M5-90] Length = 559 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 11 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 71 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 191 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 305 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|23501895|ref|NP_698022.1| NAD synthetase [Brucella suis 1330] gi|254701766|ref|ZP_05163594.1| NAD synthetase [Brucella suis bv. 5 str. 513] gi|254704307|ref|ZP_05166135.1| NAD synthetase [Brucella suis bv. 3 str. 686] gi|254706790|ref|ZP_05168618.1| NAD synthetase [Brucella pinnipedialis M163/99/10] gi|254714100|ref|ZP_05175911.1| NAD synthetase [Brucella ceti M644/93/1] gi|254716843|ref|ZP_05178654.1| NAD synthetase [Brucella ceti M13/05/1] gi|256159733|ref|ZP_05457480.1| NAD synthetase [Brucella ceti M490/95/1] gi|256254996|ref|ZP_05460532.1| NAD synthetase [Brucella ceti B1/94] gi|256369438|ref|YP_003106946.1| NAD(+) synthase [Brucella microti CCM 4915] gi|260168725|ref|ZP_05755536.1| NAD synthetase [Brucella sp. F5/99] gi|23347836|gb|AAN29937.1| NH(3)-dependent NAD+ synthetase [Brucella suis 1330] gi|255999598|gb|ACU47997.1| NAD(+) synthase [Brucella microti CCM 4915] Length = 550 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|209549596|ref|YP_002281513.1| NAD synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535352|gb|ACI55287.1| NAD+ synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 559 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 315/555 (56%), Positives = 393/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IAI QLNP+VGD+AGN+AKAR AR +A R+G L++ TELFISGYPPEDLV K +FI+ Sbjct: 11 FRIAIGQLNPMVGDVAGNLAKAREARADAAREGAHLLVLTELFISGYPPEDLVLKPAFIR 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+++L +DT DGG G+++GFPRQDQ G NSV +LD G +IAVRDKI+LPNY EF Sbjct: 71 ACWKAVESLAADTADGGPGVLIGFPRQDQTGRYNSVAVLDGGKVIAVRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +R+GI ICEDIW +C+ L + GAE L S N SPYY K+ Sbjct: 131 EKRVFNQGAMPGPVNFRGVRIGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKV 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++V Q+ LP++Y Q+GGQDEL+FDGASF F+ + LAFQM F +T Sbjct: 191 DIRHQVVLKQVIETGLPLVYAAQLGGQDELVFDGASFAFNADKSLAFQMSQFETALAVTT 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W +IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRGGAGWHC-----AEGPMAHIPEGEEAD-YRACLLGFRDYVNKNGFKTVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+C AIAVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S Sbjct: 305 SAICTAIAVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSDLFAGTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ LA WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLP Sbjct: 425 GFNPIKDLYKMQVYALARWRNENVPPSALGPSREVIPKNIIDKAPSAELRPDQKDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYPILDDI++ +VE E + + ++ TV +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPILDDILECLVEKEMAVEEIVARGHDVVTVHRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|306843889|ref|ZP_07476484.1| NAD+ synthetase [Brucella sp. BO1] gi|306275644|gb|EFM57368.1| NAD+ synthetase [Brucella sp. BO1] Length = 559 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 11 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 71 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 191 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WQRDGGGWRCGDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CA+ALG +YD++PI + V F + Sbjct: 305 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCARALGVRYDIVPIAEPVEGFMN 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN H LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYALSQWRNHHLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|154251557|ref|YP_001412381.1| NAD+ synthetase [Parvibaculum lavamentivorans DS-1] gi|154155507|gb|ABS62724.1| NAD+ synthetase [Parvibaculum lavamentivorans DS-1] Length = 554 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 277/559 (49%), Positives = 371/559 (66%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL+IA+AQLNPVVGDIAGN+ KA AR A+ G +LI+FTELF++GYPPEDLV K Sbjct: 1 MTDKLRIALAQLNPVVGDIAGNLQKAVEARRAASVAGAELIVFTELFLTGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + +A++ L T DGG +++G P ++ + N+V+ LD G I R K++LPNY Sbjct: 61 AFQRVAKAAVEDLARQTADGGPAVLIGAPWAEEGKLYNAVLHLDRGEIKGRRYKVHLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F E R F SG P R +R+G ICEDIW ++ + L++ GAE L N SPY Sbjct: 121 SVFDEPRVFASGPMPGPFSIRGVRIGAPICEDIW-YPDVVECLEESGAELLLVPNGSPYE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R ++ +I LP+ YVNQ+GGQDEL+FDG SF + LA QM + E+ Sbjct: 180 FNKPDARLQLALSRIRESGLPLAYVNQLGGQDELVFDGGSFVLNADFSLALQMPAWEEKI 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 T+W ++ + + + +E+ Y A V LRDYV+KN F V++GLS Sbjct: 240 TCTDWTRGEKGWVC------APGEKALVEEGDESLYLAVVQGLRDYVKKNRFPGVVLGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AAIAVDALG + V +MLPY+YTS +SL DA ACAK LG +YDV+PI + V Sbjct: 294 GGIDSALVAAIAVDALGADKVHCVMLPYRYTSSESLTDAEACAKLLGVRYDVVPIEEPVA 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S + + + SG+ EN+QSR RG +LMA+SN +MLLTT NKSE+S GY T+YG Sbjct: 354 GFTSALEKMFEGTQSGVTEENLQSRTRGVVLMAISNKFGSMLLTTGNKSEVSAGYATIYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNP+KDLYK++VF+L++WRN+H LGP VIP I+ + PSAELRP Q D+ Sbjct: 414 DMNGGFNPIKDLYKSRVFKLSNWRNTHMPKGCLGPEGRVIPERIITRPPSAELRPDQKDE 473 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ++DDI+ ++E E S + + ++ + V+ +EHLLY SEYKRRQA G K+T Sbjct: 474 DSLPPYEVMDDILHCLIEEEMSVTDIVARGHDRDLVKRIEHLLYISEYKRRQAAPGVKVT 533 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++FGRDR YPI N FRD Sbjct: 534 KRNFGRDRRYPIVNGFRDQ 552 >gi|62289938|ref|YP_221731.1| NAD synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699865|ref|YP_414439.1| NAD synthetase [Brucella melitensis biovar Abortus 2308] gi|254689244|ref|ZP_05152498.1| NAD synthetase [Brucella abortus bv. 6 str. 870] gi|254697379|ref|ZP_05159207.1| NAD synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254730277|ref|ZP_05188855.1| NAD synthetase [Brucella abortus bv. 4 str. 292] gi|256257494|ref|ZP_05463030.1| NAD synthetase [Brucella abortus bv. 9 str. C68] gi|62196070|gb|AAX74370.1| NadE, NH(3)-dependent NAD+ synthetase [Brucella abortus bv. 1 str. 9-941] gi|82615966|emb|CAJ10989.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase:NAD+ synthase [Brucella melitensis biovar Abortus 2308] Length = 550 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 302/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQD+L+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDDLVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|265984081|ref|ZP_06096816.1| NAD+ synthetase [Brucella sp. 83/13] gi|306838375|ref|ZP_07471220.1| NAD+ synthetase [Brucella sp. NF 2653] gi|264662673|gb|EEZ32934.1| NAD+ synthetase [Brucella sp. 83/13] gi|306406515|gb|EFM62749.1| NAD+ synthetase [Brucella sp. NF 2653] Length = 559 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 301/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 11 LRIAVAQLNPTMGDIAGNLAKARAARSEAARMQADLILFTELFISGYPPEDMVLKPAFVA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 71 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG +F F+ + L QM F+EQ +TE Sbjct: 191 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGTFVFNADKSLCLQMPQFAEQIALTE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WQRDGDGWRCGDGKKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CA+ALG +YD++PI + V F + Sbjct: 305 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCARALGVRYDIVPIAEPVEGFMN 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVENEMSNAEIVARGHTLETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|256044673|ref|ZP_05447577.1| NAD synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|326409035|gb|ADZ66100.1| NAD synthetase [Brucella melitensis M28] Length = 550 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|265994934|ref|ZP_06107491.1| NAD+ synthetase [Brucella melitensis bv. 3 str. Ether] gi|262766047|gb|EEZ11836.1| NAD+ synthetase [Brucella melitensis bv. 3 str. Ether] Length = 559 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 11 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 71 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 191 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 305 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALQPLFSGTDSGVTEENLQSRARGAILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|261214001|ref|ZP_05928282.1| NAD+ synthetase [Brucella abortus bv. 3 str. Tulya] gi|260915608|gb|EEX82469.1| NAD+ synthetase [Brucella abortus bv. 3 str. Tulya] Length = 559 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 387/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 11 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 71 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM+ F+EQ +TE Sbjct: 191 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMQQFAEQIALTE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 305 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|254473458|ref|ZP_05086855.1| glutamine-dependent NAD(+) synthetase [Pseudovibrio sp. JE062] gi|211957574|gb|EEA92777.1| glutamine-dependent NAD(+) synthetase [Pseudovibrio sp. JE062] Length = 555 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 282/557 (50%), Positives = 379/557 (68%), Gaps = 7/557 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + ++A+ Q NP VGDI+GN K R R+ A QG DL+L++ELF++GYP EDLV K SF Sbjct: 4 DQFRLAVVQANPCVGDISGNAEKVRHHRKLAAEQGADLVLYSELFLAGYPLEDLVRKPSF 63 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + AC ++ L +T DGG G++VG P + E + N+V +LD G + +R K++LPNY Sbjct: 64 VAACKRELEALAKETADGGPGLLVGLPWAEGEKLYNAVALLDNGKVEGLRFKVDLPNYGV 123 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F +G + PI FR +RLG+ ICED W + +C+ L++ GAE L NASPY Sbjct: 124 FDEKRVFDAGPNPGPISFRGVRLGVPICEDTWTD-EVCECLEETGAEILVVPNASPYNRE 182 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K ++R +++ ++ LP +Y NQVGGQDEL+FDGASF + + LA Q+ F+E+ Sbjct: 183 KTEERMQLMISRVVETGLPFVYCNQVGGQDELVFDGASFALNHDRSLAMQLGQFTEETGY 242 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + D + + A + +P +E + ACVL L+DYV KN F V++GLSGG Sbjct: 243 LNFKKDADEN----WLIEPARVVPMPDTQEAD-WLACVLGLKDYVNKNGFPGVVLGLSGG 297 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+CAA+AVDALG E V IMLPY+YTS +S++DA ACA ALG KYD +PI + V F Sbjct: 298 IDSAICAAMAVDALGAERVHCIMLPYRYTSEESIKDAKACADALGVKYDTIPIAEPVEGF 357 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 +S SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM Sbjct: 358 QKTLSGVFAGTESGITEENLQSRSRGVILMAVSNKFGAMVVTTGNKSEMSVGYATLYGDM 417 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGFNP+KDLYKT+V++L+ WRN H +GP EVIP +I+ K+P+AELR +QTDQ+S Sbjct: 418 NGGFNPIKDLYKTEVYRLSDWRNKHHPAGVMGPAGEVIPNNIIVKAPTAELRENQTDQDS 477 Query: 483 LPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LP Y +LDDI+ +VE E S ++ ++ ET+ VEHLLY +EYKRRQA G KIT K Sbjct: 478 LPEYDVLDDILHCLVEQELSLDEIEKRGHSVETIHRVEHLLYIAEYKRRQAAPGVKITLK 537 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N+FRD Sbjct: 538 NFGRDRRYPITNRFRDR 554 >gi|254719091|ref|ZP_05180902.1| NAD synthetase [Brucella sp. 83/13] Length = 550 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 301/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARAARSEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG +F F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGTFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDGDGWRCGDGKKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CA+ALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCARALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHTLETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|49475433|ref|YP_033474.1| NAD synthetase [Bartonella henselae str. Houston-1] gi|49238239|emb|CAF27449.1| NH3-dependent NAD synthetase [Bartonella henselae str. Houston-1] Length = 559 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 291/559 (52%), Positives = 384/559 (68%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++A+AQLNP+VGDI GN + A A ++A +G +L+LFTELFIS YPPEDLV K Sbjct: 6 MKNDFRVAVAQLNPIVGDIEGNFSLAVMAHQKAKEEGANLVLFTELFISAYPPEDLVLKP 65 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F +AC A+ L T GG GIV+G P + + + N VV+LD G I+ K +LPNY Sbjct: 66 AFTKACEDAVKKLAKLTK-GGPGIVIGLPLRHSDNIYNGVVLLDEGRIVTESLKFDLPNY 124 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +EF EKR F SG +PIV+ ++LGI+ICEDIW + ++C L +GAE + LN SPY+ Sbjct: 125 AEFDEKRVFSSGPRPEPIVYHGLKLGIVICEDIWNDFSLCAELANKGAEIILVLNGSPYH 184 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK+ KR E+V Q L I+Y NQVGGQDEL+FDG SF +GQ ++ FQMKHF Sbjct: 185 RNKILKRIEVVRAQALQSGLSIVYANQVGGQDELVFDGGSFALNGQGKMVFQMKHFENHI 244 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ W Q +++ L ADY ACVL LRDYV KN F VI+GLS Sbjct: 245 ALSHWQKKTAGWQCVSGPNETL------LNGLAADYQACVLGLRDYVNKNRFQNVILGLS 298 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALC +AVDALG E V+T+M+PY YTS +SL+DA CA LGC+Y+++PI V Sbjct: 299 GGIDSALCTTMAVDALGAEKVRTVMMPYHYTSQESLKDAKECAHLLGCRYEIIPIVQPVE 358 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F M+ PS + EN+QSR+RG ILMALSN +M++TT NKSE++VGY TLYG Sbjct: 359 VFLKTMAPVFLGLPSDVTEENLQSRVRGVILMALSNKFGSMVVTTGNKSEMAVGYATLYG 418 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKD+YKTQV+ LA WRN + + + GP VIPP+I+ K+PSAELR +Q D+ Sbjct: 419 DMNGGFNPLKDVYKTQVYALAQWRNQNHLQNLKGPEGVVIPPNIIAKAPSAELRENQKDE 478 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYPILDDI++ ++E++ S + + Y ETV +EHL+YG+EYKRRQ+ G KI+ Sbjct: 479 DSLPPYPILDDILQSLIEDDMSVCDIIKRGYLRETVEKIEHLIYGAEYKRRQSAPGVKIS 538 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+FGRDR YPI N+FR++ Sbjct: 539 YKNFGRDRRYPIVNRFRNN 557 >gi|261325107|ref|ZP_05964304.1| NAD+ synthetase [Brucella neotomae 5K33] gi|261301087|gb|EEY04584.1| NAD+ synthetase [Brucella neotomae 5K33] Length = 559 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 300/555 (54%), Positives = 385/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 11 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G +IA R K++LPNY EF Sbjct: 71 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEVIAERFKVDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 131 EKRVFEPGPMPGQVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 191 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 251 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 305 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 425 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ ++ENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLIENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|256113567|ref|ZP_05454387.1| NAD synthetase [Brucella melitensis bv. 3 str. Ether] Length = 550 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGAILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|254693729|ref|ZP_05155557.1| NAD synthetase [Brucella abortus bv. 3 str. Tulya] Length = 550 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 387/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM+ F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMQQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSTPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|256061106|ref|ZP_05451260.1| NAD synthetase [Brucella neotomae 5K33] Length = 550 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 300/555 (54%), Positives = 385/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G +IA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEVIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGQVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ ++ENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLIENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRRYPITNRFRDR 550 >gi|148560440|ref|YP_001258955.1| NAD synthetase [Brucella ovis ATCC 25840] gi|148371697|gb|ABQ61676.1| NH(3)-dependent NAD+ synthetase [Brucella ovis ATCC 25840] Length = 550 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 303/555 (54%), Positives = 386/555 (69%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNP +GDIAGN+AKAR AR EA R DLILFTELFISGYPPED+V K +F+ Sbjct: 2 LRIAVAQLNPTMGDIAGNLAKARTARAEAARMQADLILFTELFISGYPPEDMVLKPAFVA 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P G N+V +LD G IIA R K++LPNY EF Sbjct: 62 ACEKAVRMLAADTADGGPGVIIGTPLHRDSGSHNAVAVLDGGEIIAERFKVDLPNYGEFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G P+ FR +RLGI +CEDIW + + L + GAE L N SPY+ K+ Sbjct: 122 EKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LPI+Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +TE Sbjct: 182 DRRHQVVLKQVIETGLPIVYANQVGGQDELVFDGGSFVFNADKSLCLQMPQFAEQIALTE 241 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W D + S + ADY AC+L LRDYV KN F V++GLSGGID Sbjct: 242 WQRDGDGWRCRDGEKASLP------EGLAADYAACMLGLRDYVNKNGFKDVVLGLSGGID 295 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ +MLPY+YTS +SL DAA CAKALG +YD++PI + V F + Sbjct: 296 SAICAALGVDALGKDRVRCVMLPYRYTSEESLADAADCAKALGVRYDIVPIAEPVEGFMN 355 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 356 ALQPLFSGTDSGVTEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNG 415 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ L+ WRN + LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 416 GFNPIKDVYKMQVYALSQWRNQNLPQGALGPAGEVIPQNIISKAPSAELRENQTDQDSLP 475 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S + + ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 476 PYPVLDDILECLVENEMSNAEIVARGHALETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 535 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 536 GRDRHYPITNRFRDR 550 >gi|319783805|ref|YP_004143281.1| NAD+ synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169693|gb|ADV13231.1| NAD+ synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 558 Score = 661 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 307/563 (54%), Positives = 397/563 (70%), Gaps = 11/563 (1%) Query: 1 MLKKL---KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 M KKL +IA+AQLNP VGDI+GN+AKAR AR +A RQG DL+L+TELF++GYPPEDLV Sbjct: 1 MTKKLDILRIAVAQLNPTVGDISGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLV 60 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 K +F++AC A +DT DGG G+++G P + + G NS++ D G IIA R K++L Sbjct: 61 LKPAFLKACEKAAQDFAADTADGGPGVIIGTPLKRKSGTHNSIIFADGGKIIAERYKLDL 120 Query: 118 PNYSEFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 PNY EF EKR F +G P+ FR +R+GI ICEDIW + +IC+ L + GAE L N Sbjct: 121 PNYGEFDEKRVFQAGPEIQGPVNFRGVRIGIPICEDIWGDVDICETLAESGAEILLVPNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPYY K+ RH++V Q+ LP+IY NQ+GGQDELIFDGASF + LAFQM F Sbjct: 181 SPYYRAKIDVRHQVVIRQVIECGLPMIYANQLGGQDELIFDGASFAIGADKTLAFQMSQF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W Q ++ IP +EE Y AC+L LRDYV KN F V+ Sbjct: 241 EEAVDVTTW-----KRQGDHWVCSEGPMSKIPDREEAD-YRACMLGLRDYVNKNGFKNVV 294 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSA+CAA+AVDALG+E ++ +M+PY+YTS SL+DA CA+ALGC+YD++PI Sbjct: 295 LGLSGGIDSAICAALAVDALGEERLRAVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIF 354 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + V F ++Q + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY Sbjct: 355 EPVEGFLHALTQMFEGTKEGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYA 414 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGFNP+KDLYK QV+ L+ WRNSH LGP EVIP +I++K+PSAELR + Sbjct: 415 TLYGDMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELREN 474 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLPPYP+LDDI++ +VENE + + ++ TV +EHLLY +EYKRRQA G Sbjct: 475 QTDQDSLPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPG 534 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 KIT K+FGRDR YPI+N+FRD Sbjct: 535 VKITKKNFGRDRRYPITNRFRDR 557 >gi|239831980|ref|ZP_04680309.1| NAD+ synthetase [Ochrobactrum intermedium LMG 3301] gi|239824247|gb|EEQ95815.1| NAD+ synthetase [Ochrobactrum intermedium LMG 3301] Length = 561 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 307/555 (55%), Positives = 394/555 (70%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQLNPV+GDIAGN+AKAR AR EA R DLILFTELFISGYPPEDLV K SF+ Sbjct: 13 LRIAVAQLNPVMGDIAGNLAKARAARAEAARMQADLILFTELFISGYPPEDLVLKPSFLA 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L +DT DGG G+++G P + G+ NS+ +LD G +IA R K++LPNY EF Sbjct: 73 ACEKAVRDLANDTADGGPGVIIGTPLSRESGLHNSIAVLDGGEVIAERFKVDLPNYGEFD 132 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F SG P+ FR +R+GI ICEDIW + + L + GAE L N SPY+ K+ Sbjct: 133 EKRVFQSGPMPGPVNFRGVRIGIPICEDIWGELGVAETLAESGAEILLVPNGSPYHRAKM 192 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RH++V Q+ LP++Y NQVGGQDEL+FDG SF F+ + L QM F+EQ +T Sbjct: 193 DRRHQVVLKQVIETELPMVYANQVGGQDELVFDGGSFAFNADRSLCLQMPQFAEQIVLTV 252 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 WH + + + +P EADY+AC+L LRDYV KN F V++GLSGGID Sbjct: 253 WHRNNDGWRC-----EEGEKADLPEG-LEADYSACMLGLRDYVNKNGFKDVVLGLSGGID 306 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+ VDALGK+ V+ IMLPY+YTS +SL+DAA CAKALG +YD++PI V F Sbjct: 307 SAICAALGVDALGKDRVRCIMLPYRYTSDESLKDAADCAKALGVRYDIVPIAAPVEGFLE 366 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + SG+ EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 367 ALYPLFSGTESGVTEENLQSRARGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGDMNG 426 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KD+YK QV+ ++ WRN+H T LGP EVIP +I+ K+PSAELR +QTDQ+SLP Sbjct: 427 GFNPIKDVYKMQVYAMSEWRNNHVPTGALGPSGEVIPQNIISKAPSAELRENQTDQDSLP 486 Query: 485 PYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VENE S ++ ETV+ +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 487 PYPVLDDILECLVENEMSNTEIAARGHSLETVQRIEHLLYLAEYKRRQSAPGVKITKKNF 546 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 547 GRDRRYPITNRFRDR 561 >gi|121601772|ref|YP_988914.1| NAD synthetase [Bartonella bacilliformis KC583] gi|120613949|gb|ABM44550.1| glutamine-dependent NAD(+) synthetase [Bartonella bacilliformis KC583] Length = 560 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 298/565 (52%), Positives = 386/565 (68%), Gaps = 14/565 (2%) Query: 1 MLKK------LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPE 54 M+ K +IA+AQLNP+VGDI GN A+ A ++A +QG DL+L TELFIS YPPE Sbjct: 2 MMAKELIKDDFRIAVAQLNPIVGDIEGNFVLAKMAHQKAQQQGADLVLLTELFISAYPPE 61 Query: 55 DLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 DLV K +F +AC +AI L T + G GI++G P + + + N VV+LD G +IA K Sbjct: 62 DLVLKPAFTKACENAIKKLAKVTKE-GPGIIIGAPIKRGDAIYNGVVLLDNGQVIAEYLK 120 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 +LPNY EF EKR F G S +PIV+R I LGI++CEDIW +S+IC + +GAEF+ Sbjct: 121 FDLPNYLEFDEKRVFSPGPSPEPIVYRGITLGIVVCEDIWNDSSICTEFRNKGAEFILVS 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 N SPY HNK+ KR IV + +P+IY NQVGGQDELIFDG SF + Q +AFQMK Sbjct: 181 NGSPYCHNKILKRMSIVRARAIQAGVPVIYANQVGGQDELIFDGGSFALNEQGTVAFQMK 240 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 HF ++ W Q ++ L ADY+ACVL LRDYV KN F Sbjct: 241 HFESHIAVSHWQRKSIGWQCVSGPNEKL------LGGLAADYHACVLGLRDYVNKNGFKD 294 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 VI+GLSGGIDSALCAAIA DALG E V+ IM+PY YTS +SL+DA CA L C Y+++P Sbjct: 295 VILGLSGGIDSALCAAIATDALGAERVRAIMMPYHYTSEESLKDAKDCAHFLNCHYEIIP 354 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I V +F S+++ PS + EN+QSR+RG ILMALSN +M++TT NKSE++VG Sbjct: 355 IVQPVENFLSIIAPIFSGLPSDVTEENLQSRVRGTILMALSNKFGSMVITTGNKSEMAVG 414 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGFNP+KD+YK QV+ LA WRN + + + LG VIPP+I++K+PSAELR Sbjct: 415 YATLYGDMNGGFNPIKDIYKMQVYALAEWRNKNHLLNFLGAEGVVIPPNIIKKAPSAELR 474 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAP 533 +Q D++SLPPYPILDDI++ +VEN+ S + + ETV VEHLLY +E+KRRQ+ Sbjct: 475 ENQKDEDSLPPYPILDDILQSLVENDMSVDEIVKCGHLRETVEKVEHLLYVAEHKRRQSA 534 Query: 534 VGTKITAKSFGRDRLYPISNKFRDH 558 G KI++K+FGRDR YPI+N FRD Sbjct: 535 PGIKISSKNFGRDRRYPITNYFRDK 559 >gi|260463957|ref|ZP_05812153.1| NAD+ synthetase [Mesorhizobium opportunistum WSM2075] gi|259030332|gb|EEW31612.1| NAD+ synthetase [Mesorhizobium opportunistum WSM2075] Length = 558 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 309/563 (54%), Positives = 394/563 (69%), Gaps = 11/563 (1%) Query: 1 MLKKL---KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 M KKL +IAIAQLNP VGD+AGN+AKAR AR +A RQG DL+L+TELF++GYPPEDLV Sbjct: 1 MTKKLDILRIAIAQLNPTVGDVAGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLV 60 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 K +F++AC A +DT DGG G+++G P + + G NS+V D G IIA R K++L Sbjct: 61 LKPAFLKACEKAAQDFAADTADGGPGVIIGTPLKRKSGTHNSIVFADGGKIIAERYKLDL 120 Query: 118 PNYSEFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 PNY EF EKR F +G P+ FR +RLGI ICEDIW IC+ L + GAE L N Sbjct: 121 PNYGEFDEKRVFQAGPEIQGPVNFRGVRLGIPICEDIWGEVGICETLAESGAEILLVPNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPYY K+ RH++V Q+ LPIIY NQ+GGQDELIFDGASF + LAFQM F Sbjct: 181 SPYYRAKIDVRHQVVIRQVIECGLPIIYANQLGGQDELIFDGASFAIGADKTLAFQMSQF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 + +T W + + IP +EE Y AC+L LRDYV KN F V+ Sbjct: 241 EDAVDVTTW-----KRTDDGWACAEGPMSKIPEREEAD-YRACMLGLRDYVNKNGFKNVV 294 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSA+CAA+AVDALG+E ++ +M+PY+YTS SL+DA CA+ALGC+YD++PI Sbjct: 295 LGLSGGIDSAICAALAVDALGEERLRAVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIF 354 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + V F ++Q + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY Sbjct: 355 EPVEGFLHALTQLFEGTKEGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYA 414 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGFNP+KDLYK QV+ L+ WRNSH LGP EVIP +I++K+PSAELR + Sbjct: 415 TLYGDMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELREN 474 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLPPYP+LDDI++ +VENE + + ++ TV +EHLLY +EYKRRQA G Sbjct: 475 QTDQDSLPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPG 534 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 KIT K+FGRDR YPI+N+FRD Sbjct: 535 VKITRKNFGRDRRYPITNRFRDR 557 >gi|13470971|ref|NP_102540.1| NAD synthetase [Mesorhizobium loti MAFF303099] gi|14021714|dbj|BAB48326.1| NH3-dependent NAD synthetase [Mesorhizobium loti MAFF303099] Length = 558 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 306/563 (54%), Positives = 393/563 (69%), Gaps = 11/563 (1%) Query: 1 MLKK---LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 M KK L+IAIAQLNP VGD+AGN+AKAR AR +A RQG DL+L+TELF++GYPPEDLV Sbjct: 1 MTKKPDILRIAIAQLNPTVGDVAGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLV 60 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 K +F++AC A +DT DGG G+++G P + + G NS+++ D G IIA R K++L Sbjct: 61 LKPAFLKACEKAAQEFAADTSDGGPGVIIGTPLKRKSGTHNSIIVADGGKIIAERYKLDL 120 Query: 118 PNYSEFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 PNY EF EKR F +G P+ FR +R+GI ICEDIW + IC+ L + GAE L N Sbjct: 121 PNYGEFDEKRVFQAGPEIQGPVNFRGVRIGIPICEDIWGDVGICESLAESGAEILLVPNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPYY K+ R+++V QI LPI Y NQ+GGQDELIFDGASF + LAFQM F Sbjct: 181 SPYYRAKIDVRYQVVIRQIIECGLPITYANQLGGQDELIFDGASFAIGADKTLAFQMSQF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + W + IP +EE Y AC+L LRDYV KN F V+ Sbjct: 241 EEAVDVVTW-----KRGEDGWVCSEGPMSKIPEREEAD-YRACMLGLRDYVNKNGFKNVV 294 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSA+CAA+AVDALG+E ++ +M+PY+YTS SL+DA CA+ALGC+YD++PI Sbjct: 295 LGLSGGIDSAICAALAVDALGEERLRAVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIF 354 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + V F ++Q + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY Sbjct: 355 EPVEGFLHALTQLFEGTKEGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYA 414 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGFNP+KDLYK QV+ L+ WRNSH LGP EVIP +I++K+PSAELR + Sbjct: 415 TLYGDMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELREN 474 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLPPYP+LDDI++ +VENE + + ++ TV +EHLLY +EYKRRQA G Sbjct: 475 QTDQDSLPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPG 534 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 KIT K+FGRDR YPI+N+FRD Sbjct: 535 VKITRKNFGRDRRYPITNRFRDR 557 >gi|163868125|ref|YP_001609329.1| NAD synthetase [Bartonella tribocorum CIP 105476] gi|161017776|emb|CAK01334.1| NH3-dependent NAD synthetase [Bartonella tribocorum CIP 105476] Length = 553 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 291/559 (52%), Positives = 380/559 (67%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++A+AQLNP+VGDI GN + A A ++A +G DL+LFTELFIS YPPEDLV K Sbjct: 1 MKNNFRVAVAQLNPIVGDIGGNFSLAVMAHQKAKEEGADLVLFTELFISAYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F +AC +++ L T GG GI++G P + + N +++LD G +I K +LPNY Sbjct: 61 AFTKACEESVEKLAKITV-GGPGIIIGLPLRRNGNIYNGLMLLDEGRVITESLKFDLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +EF EKR F G +PI + I+LGI+ICEDIW +S++C L +GAE + LN SPYY Sbjct: 120 AEFDEKRLFSPGPRPEPIDYHGIKLGIVICEDIWNDSSLCAELCNKGAEMILVLNGSPYY 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK KR E+V +PIIY NQVGGQDEL+FDG SF +GQ ++ FQMKHF Sbjct: 180 RNKTLKRIEVVRAHALQFGVPIIYANQVGGQDELVFDGGSFALNGQGKMVFQMKHFESHI 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ W + +++ L + ADY ACVL L+DYV KN F VI+GLS Sbjct: 240 SVSHWQRKTTGWHYVSGPNENL------LTDLAADYQACVLGLKDYVNKNGFKDVILGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALCAA+AVDALG E V+TIM+PY YTS +SL+DA CA LGC+Y+++PI V Sbjct: 294 GGIDSALCAAMAVDALGAERVRTIMMPYHYTSQESLKDAKECADLLGCRYEIIPIAQPVE 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + M+ S + EN+QSRIRG +LMALSN +M++TT NKSE++VGY TLYG Sbjct: 354 AFLNTMAPVFLGLSSDVTEENLQSRIRGTLLMALSNKFGSMVVTTGNKSEMAVGYATLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKD+YK QV+ LA WRN + + GP VIP +I++K+PSAELR +Q D+ Sbjct: 414 DMNGGFNPLKDIYKMQVYALADWRNKNYLHHLKGPEGIVIPSNIIKKAPSAELRENQKDE 473 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYPILDDI++ +VEN+ S + Q Y ETV +EHLLY +EYKRRQ+ G KI+ Sbjct: 474 DSLPPYPILDDILQSLVENDMSIGDIVQRGYLRETVEKIEHLLYAAEYKRRQSAPGVKIS 533 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+FGRDR YPI N FRD Sbjct: 534 YKNFGRDRRYPIVNHFRDK 552 >gi|49474273|ref|YP_032315.1| NAD synthetase [Bartonella quintana str. Toulouse] gi|49239777|emb|CAF26167.1| NH3-dependent NAD synthetase [Bartonella quintana str. Toulouse] Length = 558 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 291/559 (52%), Positives = 376/559 (67%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++A+AQLNPVVGDI GN + A A ++A +G DL+LFTELFIS YPPEDLV K Sbjct: 6 MKNDFRVAVAQLNPVVGDIEGNFSLAVMAYQKAREEGADLVLFTELFISAYPPEDLVLKP 65 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +FI+ C A+ L T GG GIV+G P + + + N V++LD G II+ K +LPNY Sbjct: 66 AFIKTCEGAVKELAKLT-TGGPGIVIGLPLRYNDKIFNGVMLLDEGRIISESLKFDLPNY 124 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +EF E+R F SG +PIV+ IRLGI+ICEDIW + + C L+ +GAE + LN SPY+ Sbjct: 125 AEFDERRLFSSGPRPEPIVYHGIRLGIVICEDIWNDFSFCAELRNKGAEIILVLNGSPYH 184 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK KR E+V Q LPIIY NQVGGQDEL+FDG SF +GQ ++ FQMKHF Sbjct: 185 RNKTLKRIEVVRAQALQSGLPIIYANQVGGQDELVFDGGSFALNGQGKMVFQMKHFESHI 244 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ W Q +++ ADY ACVL L DYV KN F VI+GLS Sbjct: 245 ALSHWQKKMTGWQCISGPNENL------FNGLAADYQACVLGLGDYVNKNGFKDVILGLS 298 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALC A+AVDALG + V+T+M+PY YTS +SL+DA CA LGC Y ++PI V Sbjct: 299 GGIDSALCTAMAVDALGAKRVRTVMMPYHYTSQESLKDAKECAHLLGCDYQIIPIIKPVE 358 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S ++ + EN+QSR+RG +LMALSN +M++TT NKSE++VGY TLYG Sbjct: 359 VFLSTLAPVFLGLTPDVTEENLQSRVRGTLLMALSNKFGSMVVTTGNKSEMAVGYATLYG 418 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKD+YKTQV+ LA WRN + + + G VIPP+I+ K+PSAEL +Q D+ Sbjct: 419 DMNGGFNPLKDIYKTQVYALAEWRNKNHLQNWEGSEGVVIPPNIIAKAPSAELSENQKDE 478 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYPILDDI++ ++EN+ S + + Y ETV +EHLLY +EYKRRQ+ G KI+ Sbjct: 479 DSLPPYPILDDILQSLIENDMSVCDIVKRGYLRETVEKIEHLLYVAEYKRRQSAPGVKIS 538 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+FGRDR YPI N FRD Sbjct: 539 YKNFGRDRRYPIVNHFRDK 557 >gi|118588086|ref|ZP_01545496.1| NAD synthetase [Stappia aggregata IAM 12614] gi|118439708|gb|EAV46339.1| NAD synthetase [Stappia aggregata IAM 12614] Length = 555 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 277/559 (49%), Positives = 382/559 (68%), Gaps = 9/559 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++A+AQLNP VGD+AGN R+AR +A QG DL+L +EL ++GY PEDLV K + Sbjct: 3 SDRFRLAVAQLNPTVGDVAGNADLVRKARLDAASQGADLVLTSELVLAGYLPEDLVLKPA 62 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F++ C A +TL +T DGG G+++G P + ++ V N+ ++LD G I AVR K +LPNY Sbjct: 63 FVRRCMEAAETLAGETADGGPGLILGSPWRSEEGKVYNAALLLDQGEIKAVRYKYDLPNY 122 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F +G P+ FR +R+G+ ICEDIW + +C+ L++ GAE L N SPY+ Sbjct: 123 SVFDEKRVFAAGPLPGPVDFRGVRIGLPICEDIWND-EVCECLEETGAELLLVPNGSPYW 181 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 ++ + R ++V ++ LP++Y NQ+GGQDEL+FDG SF + LAFQM F Sbjct: 182 EHRAEHRLQVVVSRVVQTGLPLVYCNQLGGQDELVFDGGSFALHADRSLAFQMPQFETAL 241 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +++W D + ++ S +P +E + ACV+ L DYV KN F V++GLS Sbjct: 242 GISDWKRDG-----DTWLCENGSVAKLPDLDEAN-WRACVMGLGDYVTKNGFPGVVLGLS 295 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+CAA+AVDALG + V IMLPY+YTS +S+ DAAACAKALG +YD +PI + V Sbjct: 296 GGIDSAICAAMAVDALGADKVHAIMLPYRYTSEESITDAAACAKALGIRYDTVPISEPVE 355 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S +S EN+QSR RG ILMA+SN M++TT NKSE+SVGY TLYG Sbjct: 356 GFRSALSNLFAGTKEDTTEENLQSRARGVILMAVSNKFGHMVMTTGNKSEMSVGYATLYG 415 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKTQV+ LA WRN++ LGP EVIP +I+ K P+AELR +QTDQ Sbjct: 416 DMNGGYNPIKDLYKTQVYHLAEWRNNNRPEGLLGPGREVIPSNIITKVPTAELRENQTDQ 475 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LDDI++ +VE+E S + ++ ++ + +EHLLY +EYKRRQAP G KIT Sbjct: 476 DSLPPYDVLDDILECLVEDEMSVGDIEKRGHDRALIHRIEHLLYIAEYKRRQAPPGVKIT 535 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++FG+DR YPI+N+FRD Sbjct: 536 ERNFGKDRRYPITNRFRDR 554 >gi|240850328|ref|YP_002971721.1| NH3-dependent NAD synthetase [Bartonella grahamii as4aup] gi|240267451|gb|ACS51039.1| NH3-dependent NAD synthetase [Bartonella grahamii as4aup] Length = 558 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 293/559 (52%), Positives = 380/559 (67%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +++IAQLNP+VGDI GN + A A ++A +G DL+LFTELFIS YPPEDLV K Sbjct: 6 MKNDFRVSIAQLNPIVGDIEGNFSLAAMAHQKAKEEGADLVLFTELFISAYPPEDLVLKP 65 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + C + L T GG GIV+G P + + N V++LD G +IA K +LPNY Sbjct: 66 AFTKTCEETVKKLAKITV-GGPGIVIGLPLRRNGNIYNGVMLLDEGRVIAESLKFDLPNY 124 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 +EF EKR F SG +P+++R + LGI+ICEDIW +S++C L +GAE + LN SPY Sbjct: 125 AEFDEKRLFSSGPRPEPLIYRGVGLGIVICEDIWNDSSLCAELGNKGAEIILVLNGSPYD 184 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK KR ++V Q +PIIY NQVGGQDEL+FDG SF +G+ + FQMKHF Sbjct: 185 RNKTLKRIDVVHTQALRSGVPIIYANQVGGQDELVFDGGSFALNGEGKKIFQMKHFDSHI 244 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ W ++S L ADY ACVL LRDYV KN F VI+GLS Sbjct: 245 ALSHWQKITTGWHCISGPNESL------LNGLAADYQACVLGLRDYVNKNRFKDVILGLS 298 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSALCAA+AVDALG E V+TIM+PY YTS +SL+DA CA+ LGC Y+++PI V Sbjct: 299 GGVDSALCAAMAVDALGSERVRTIMMPYHYTSQESLKDAKECAQLLGCHYEIIPIEQPVE 358 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + M+ PS + EN+QSR+RG ILMALSN +M++TT NKSE++VGY TLYG Sbjct: 359 AFLNAMAPVFLGLPSDVTEENLQSRVRGTILMALSNKFGSMVVTTGNKSEMAVGYATLYG 418 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKD+YK QV+ LA WRN + + + GP VIP +I+EK+PSAELR +Q D+ Sbjct: 419 DMNGGFNPLKDIYKMQVYALAEWRNKNHLHNLKGPEGIVIPSNIIEKAPSAELRENQKDE 478 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYPILDDI++ ++EN+ S + + Y+ ETV VE LLYG+EYKRRQ+ G KI+ Sbjct: 479 DSLPPYPILDDILQSLIENDMSICDIIKRGYSRETVEKVEQLLYGAEYKRRQSAPGVKIS 538 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+FGRDR YPI N FRD Sbjct: 539 YKNFGRDRRYPIVNHFRDK 557 >gi|92117038|ref|YP_576767.1| NAD synthetase [Nitrobacter hamburgensis X14] gi|91799932|gb|ABE62307.1| NH(3)-dependent NAD(+) synthetase [Nitrobacter hamburgensis X14] Length = 583 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 274/564 (48%), Positives = 368/564 (65%), Gaps = 14/564 (2%) Query: 1 ML-KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M KI + QLNP VGDIAGN AKAR AR +A G L+ ELFI+GYPPEDLV K Sbjct: 1 MTETTFKITLGQLNPTVGDIAGNAAKARVARAQAKADGAALVALPELFIAGYPPEDLVLK 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +F AC A++TL +T DGG +++G P D + N+ +LD G + A+R K+NLPN Sbjct: 61 PAFQAACREAVETLARETSDGGPAVLIGTPWVDDGKLYNAYALLDGGRVAAIRFKVNLPN 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSL 174 Y F EKR F G P+ R +R+G+ ICED W + N+ + L + GAE L Sbjct: 121 YGVFDEKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESAEYENVVECLAETGAEILLVP 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 N SPY K R I +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ Sbjct: 181 NGSPYAKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLP 240 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E +W + A + + ++ADY ACVL LRDYV KN F Sbjct: 241 AFRESLVTLQWTKSAAGWRC-------AGPVAPQIDGDKADYAACVLGLRDYVHKNGFPG 293 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++G+SGGIDSALCAAIAVDALG E V+ +MLP+++T+ SL+DAA AKALG +Y+VLP Sbjct: 294 VLLGVSGGIDSALCAAIAVDALGAERVRGVMLPFRFTAQVSLDDAATLAKALGIRYEVLP 353 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I VN F ++S P I EN+Q+R RG +LMA+SN AM++TT NKSE+SVG Sbjct: 354 IAPAVNGFEEVLSGTFAGLPRDITEENLQARARGTLLMAISNKLGAMVVTTGNKSEMSVG 413 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGFNP+KD+YKT+VF+L++ RN+ LGP EVIP +I+ + P+AELR Sbjct: 414 YATLYGDMNGGFNPIKDIYKTEVFRLSNLRNAWKPDGALGPSGEVIPVNIITRPPTAELR 473 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAP 533 +QTDQ+SLPPY +LD I++R++E EE + + ++ + V ++ LL +EYKRRQA Sbjct: 474 ENQTDQDSLPPYDVLDAILERLIEREEPLASIVAEGFDRDMVARIDRLLNVAEYKRRQAA 533 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 G K+T ++FGRDR YPI+N+FRD Sbjct: 534 PGVKVTRRNFGRDRRYPITNRFRD 557 >gi|319407350|emb|CBI80995.1| NH3-dependent NAD synthetase [Bartonella sp. 1-1C] Length = 558 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 298/564 (52%), Positives = 389/564 (68%), Gaps = 13/564 (2%) Query: 1 MLKKL-----KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED 55 M +KL +I IAQLNPV+GDI GN A+ A ++A QG DL+L TELFIS YPPED Sbjct: 1 MKQKLIKDDFRIVIAQLNPVIGDIGGNFTLAKMAYQKAYEQGADLVLLTELFISAYPPED 60 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 LV K SF +AC A+ L T + G GI++G P + + N ++ILD G +IA K Sbjct: 61 LVLKSSFTEACEDAVRKLAQLTKE-GPGIIIGVPLKRNNNLYNGIMILDDGQVIAECFKY 119 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +LPNY EF EKR F SG +PIV+R I LG+LICEDIW + +IC +L +GAE + N Sbjct: 120 DLPNYCEFDEKRVFASGPRPEPIVYRGITLGVLICEDIWNDPSICANLSHKGAEIILVSN 179 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 SPY+ NK +KR +IV + +PIIY NQVGGQDEL+FDG SF D Q+AFQMKH Sbjct: 180 GSPYHRNKTQKRLDIVRSRAVQSCVPIIYANQVGGQDELVFDGGSFALDEHGQIAFQMKH 239 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F Q ++ W Q D+ L ADY+ACVL L+DYV KN F V Sbjct: 240 FESQITLSHWQRKSIGWQCISGPDEKL------LDGVAADYHACVLGLKDYVNKNRFKDV 293 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 ++G SGGIDSALCAAIAVDALG E V +M+PY YTS +SL+DA CA+ LGC+Y+++PI Sbjct: 294 LLGFSGGIDSALCAAIAVDALGAERVCAVMMPYYYTSQESLKDAKDCARLLGCRYEIIPI 353 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 LV F S+M+ + + EN+QSRIRG++LMALSN +M++TT NKSE++VGY Sbjct: 354 FKLVESFLSIMAPIFSGLKTDVTEENLQSRIRGSVLMALSNKFDSMVITTGNKSEMAVGY 413 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGDM+GGFNP+KD+YKTQV++LA WRN + + + LGP VIP +I+ K+PSAELR Sbjct: 414 ATLYGDMNGGFNPIKDIYKTQVYKLAEWRNKNYLQNLLGPKRIVIPNNIITKAPSAELRD 473 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPV 534 +Q D++SLPPYPILDDI++ +VE++ S + + ++ +TV VEHLLY +EYKRRQ+ + Sbjct: 474 NQKDEDSLPPYPILDDILQSLVEDDMSVCDILKRGHSRQTVEKVEHLLYLAEYKRRQSAL 533 Query: 535 GTKITAKSFGRDRLYPISNKFRDH 558 G KI+ K+FGRDR YPI+N FRD Sbjct: 534 GVKISYKNFGRDRRYPITNHFRDK 557 >gi|15888965|ref|NP_354646.1| NAD synthetase [Agrobacterium tumefaciens str. C58] gi|15156746|gb|AAK87431.1| NAD (+) synthetase [Agrobacterium tumefaciens str. C58] Length = 559 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 310/555 (55%), Positives = 397/555 (71%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+ Q NP VGD+AGN+A+AR AR +A QG DL+L TELFISGYPPEDLV K +F++ Sbjct: 11 LRIAVGQFNPTVGDVAGNLARAREARADAATQGADLLLLTELFISGYPPEDLVLKPAFLK 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++ L ++T DGG G+V+GFPRQ + G NSV +LD G IIA+RDKI+LPNY EF Sbjct: 71 ACLKAVEELAAETADGGPGVVIGFPRQGETGRHNSVALLDGGKIIALRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + P FR +R+GI ICE+IW + +C+ L + GAE L N SPYY KL Sbjct: 131 EKRVFEEGSISGPYNFRGVRIGIPICEEIWNDMGVCETLAESGAEILLVPNGSPYYRGKL 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++ Q+ LP+++ NQ+GGQDEL+FDGASF F+ + LAFQM F +T+ Sbjct: 191 DVRHQVALRQVIESGLPLVFANQLGGQDELVFDGASFGFNADKTLAFQMSQFEATLAVTD 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W DS IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRTADGWHC-----DSGPFSKIPEGEEAD-YRACMLGFRDYVNKNGFKSVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+AVDALG+E V+ IMLPY+YTS +SL+DAA CA+ALGC+YD++PI + V F S Sbjct: 305 SAICAALAVDALGEERVRCIMLPYRYTSEESLKDAADCARALGCRYDIVPIVEPVEGFLS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S+ + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSELFEGTEEGITEENLQSRTRGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ ++SWRN+H LGP EVIP +I+ K+PSAELRP+QTDQ+SLP Sbjct: 425 GFNPIKDLYKMQVYAISSWRNAHVPPGALGPSGEVIPANIIAKAPSAELRPNQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E S + ++ TV VEHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMSVEEILARGHDVATVHRVEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|325293042|ref|YP_004278906.1| NH3-dependent NAD synthetase [Agrobacterium sp. H13-3] gi|325060895|gb|ADY64586.1| NH3-dependent NAD synthetase [Agrobacterium sp. H13-3] Length = 559 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 309/555 (55%), Positives = 399/555 (71%), Gaps = 7/555 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+ Q NP VGD+AGN+A+AR AR +A QG DL+L TELFISGYPPEDLV K +F++ Sbjct: 11 LRIAVGQFNPTVGDVAGNLARAREARADAATQGADLLLLTELFISGYPPEDLVLKPAFLK 70 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A++ L ++T DGG G+V+GFPRQ + G NSV +LD G IIA+RDKI+LPNY EF Sbjct: 71 ACLKAVEELAAETADGGPGVVIGFPRQGETGRHNSVALLDGGKIIALRDKIDLPNYGEFD 130 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + P FR +R+GI ICE+IW + +C+ L + GAE L N SPYY KL Sbjct: 131 EKRVFAEGSISGPYNFRGVRIGIPICEEIWNDMGVCETLAESGAEILLVPNGSPYYRGKL 190 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RH++ Q+ LP+++ NQ+GGQDEL+FDGASF F+ + LAFQM F +T+ Sbjct: 191 DVRHQVALKQVIESGLPLVFANQLGGQDELVFDGASFGFNADKTLAFQMSQFEATLAVTD 250 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + + +S IP EE Y AC+L RDYV KN F V++GLSGGID Sbjct: 251 WKRTAEGWRC-----ESGPFSKIPEGEEAD-YRACMLGFRDYVNKNGFKSVVLGLSGGID 304 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+CAA+AVDALG+E V+ IMLPY+YTS SL+DAA CA+ALGC+YD++PI + V+ F S Sbjct: 305 SAICAALAVDALGEERVRCIMLPYRYTSEDSLKDAADCARALGCRYDIVPIAEPVDGFLS 364 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S+ + GI EN+QSR RG ILMA+SN +M++TT NKSE+SVGY TLYGDM+G Sbjct: 365 ALSEMFEGTEEGITEENLQSRTRGTILMAVSNKFGSMVVTTGNKSEMSVGYATLYGDMNG 424 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYK QV+ ++SWRNSH LGP EVIP +I+ K+PSAELRP+QTDQ+SLP Sbjct: 425 GFNPIKDLYKMQVYAISSWRNSHVPPGALGPSGEVIPANIISKAPSAELRPNQTDQDSLP 484 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP+LDDI++ +VE E S + ++ TV +EHLLY +EYKRRQ+ G KIT K+F Sbjct: 485 PYPVLDDILECLVEKEMSVEEILARGHDIATVHRIEHLLYLAEYKRRQSAPGVKITKKNF 544 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+N+FRD Sbjct: 545 GRDRRYPITNRFRDR 559 >gi|319899020|ref|YP_004159113.1| NH3-dependent NAD synthetase [Bartonella clarridgeiae 73] gi|319402984|emb|CBI76537.1| NH3-dependent NAD synthetase [Bartonella clarridgeiae 73] Length = 558 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 288/564 (51%), Positives = 379/564 (67%), Gaps = 13/564 (2%) Query: 1 MLKKL-----KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED 55 M +KL +I IAQLNP++GDI GN A ++A QG DLIL TELFIS YPPED Sbjct: 1 MTQKLIKDDLRIVIAQLNPIIGDIEGNFTLAEITYQKACEQGADLILLTELFISAYPPED 60 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 LV K +F +AC A+ L T + G GI++G P + + N +++L+ G +IA R K Sbjct: 61 LVLKSAFTKACEDAVKKLAQLTKE-GPGIIIGVPLKRDNSIYNGIMLLNDGQVIAERFKC 119 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +LPNY EF EKR F G +PIV+R + LG++ICEDIW + +IC L +GAE + N Sbjct: 120 DLPNYCEFDEKRVFSPGPRPEPIVYRGMTLGVVICEDIWNDPSICAELSHKGAEIILVPN 179 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 SPY+ NK +KR +IV Q +PIIY NQVGGQDEL+FDG SF D Q Q+AFQMKH Sbjct: 180 GSPYHRNKTQKRLDIVRAQAVQSCVPIIYANQVGGQDELVFDGGSFALDEQGQIAFQMKH 239 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F ++ W Q ++ L ADY ACVL L+DYV KN F V Sbjct: 240 FESHIALSHWRRKSIGWQCISGPNEEL------LDGLAADYYACVLGLKDYVNKNRFKDV 293 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+G SGGIDSALCAAIAVDALG E V +M+PY YTS +SL+DA CA LGC+Y+++PI Sbjct: 294 ILGFSGGIDSALCAAIAVDALGAERVCAVMMPYYYTSQESLKDAKDCAHLLGCRYEMIPI 353 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 V F S+M+ + + EN+QSRIRG++LM LSN +M++TT NKSE++VGY Sbjct: 354 LKPVESFLSVMAPIFSGLQTDVTEENLQSRIRGSVLMTLSNKFGSMVITTGNKSEMAVGY 413 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGDM+GGFNP+KD+YK QV++LA WRN + + + LGP +IP +I+EK PSAELR Sbjct: 414 ATLYGDMNGGFNPIKDIYKMQVYKLAEWRNKNHLQNLLGPKGIIIPSNIIEKEPSAELRE 473 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPV 534 +Q D++ LPPYPILDDI++ ++E++ S + + ++ +TV VEHLLY +EYKRRQ+ Sbjct: 474 NQKDEDFLPPYPILDDILQSLIEDDMSVSDIVKRGHSRQTVEKVEHLLYLAEYKRRQSAP 533 Query: 535 GTKITAKSFGRDRLYPISNKFRDH 558 G KI+ K+FGRDR YPI+N FRD Sbjct: 534 GVKISYKNFGRDRRYPITNHFRDK 557 >gi|319404346|emb|CBI77943.1| NH3-dependent NAD synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 558 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 294/564 (52%), Positives = 385/564 (68%), Gaps = 13/564 (2%) Query: 1 MLKKL-----KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED 55 M +KL +I IAQLNP++GDI GN + A+ A ++A Q DL+L TELFIS YPPED Sbjct: 1 MTQKLIKDDLRIVIAQLNPIIGDIKGNFSLAKMAYQKAYEQNADLVLLTELFISAYPPED 60 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 LV K SF +AC A+ L T + G GI++G P + + N +++LD G +I R K Sbjct: 61 LVLKSSFTKACEDAVRKLAQLTKE-GPGIIIGVPLKRDNSLYNGIMLLDDGQVITERFKC 119 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +LPNY EF EKR F SG +PIV+R I LG++ICEDIW + +IC L +GAE + N Sbjct: 120 DLPNYCEFDEKRVFSSGPRPEPIVYRGITLGVVICEDIWNDPSICAELSHKGAEIILVSN 179 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 SPYY NK++KR EIV Q +PIIY NQVGGQDEL+FDG SF D Q+ FQMKH Sbjct: 180 GSPYYRNKMQKRLEIVRAQAIQSCVPIIYANQVGGQDELVFDGGSFALDEHGQIVFQMKH 239 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F Q ++ W Q ++ L ADY+ACVL L+DYV KN F V Sbjct: 240 FESQIALSHWQRKSIRWQCISGPNEEL------LDGIAADYHACVLGLKDYVNKNRFKDV 293 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 ++G SGGIDSALCAAIAVDALG E V +M+PY YTS +SL+DA CA LGC+Y+++PI Sbjct: 294 LLGFSGGIDSALCAAIAVDALGAERVHAVMMPYYYTSQESLKDAKDCAHLLGCRYEIIPI 353 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 LV F S+M+ + + EN+QSR+RG+ILMALSN +M++TT NKSE++VGY Sbjct: 354 FKLVESFLSIMAPIFSGLKADVTEENLQSRVRGSILMALSNKFDSMVITTGNKSEMAVGY 413 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGDM+GGFNP+KD+YKTQV++LA WRN + + + LGP VIP +I K+PSAELR Sbjct: 414 ATLYGDMNGGFNPIKDIYKTQVYKLAEWRNKNYLQNLLGPKGIVIPSNITTKAPSAELRD 473 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPV 534 +Q D++SLPPYP+LDDI++ +VE++ S + + ++ +TV VEHLLY +EYKRRQ+ Sbjct: 474 NQKDEDSLPPYPVLDDILQFLVEDDMSVCDILKRGHSRQTVEKVEHLLYLAEYKRRQSAP 533 Query: 535 GTKITAKSFGRDRLYPISNKFRDH 558 G KI+ K+FGRDR YPI+N FRD Sbjct: 534 GVKISYKNFGRDRRYPITNYFRDK 557 >gi|319405818|emb|CBI79448.1| NH3-dependent NAD synthetase [Bartonella sp. AR 15-3] Length = 558 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 285/557 (51%), Positives = 378/557 (67%), Gaps = 8/557 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 L+I IAQLNP++GDI GN+A A ++A Q DL+L TELFIS YPPEDLV K +F Sbjct: 8 DNLRIVIAQLNPIIGDIEGNLALAEMTYQKAYEQDADLVLLTELFISAYPPEDLVLKYAF 67 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +AC A+ L T + G GI++G P + + N +++LD G +IA R K +LPNY E Sbjct: 68 TKACEDAVKKLAQLTKE-GPGIIIGIPLKRDNDLYNGIMLLDDGQVIAERFKCDLPNYCE 126 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F G +P+V+R + LG++ICEDIW + +IC L +GAE + N SPY N Sbjct: 127 FDEKRVFSPGPRPEPVVYRGMTLGVVICEDIWNDPSICAELSHKGAEIILVPNGSPYQRN 186 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K +KR +IV Q ++PIIY NQVGGQDEL+FDG SF D Q+ FQMKHF + Sbjct: 187 KTQKRLDIVRAQAVQSYVPIIYANQVGGQDELVFDGGSFAVDEHGQIVFQMKHFENHISL 246 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + W Q ++ L ADY+ACVL L+DYV KN F V++G SGG Sbjct: 247 SHWQRKSIGWQCISGPNEEL------LDGIAADYHACVLGLKDYVNKNRFKDVLLGFSGG 300 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSALCAAIAVDALG E V+ +M+PY YTS +SL+DA CA LGC+Y+V+PI V F Sbjct: 301 IDSALCAAIAVDALGAERVRAVMMPYCYTSQESLKDAKHCAHLLGCRYEVIPIFKPVESF 360 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S+M+ + + EN+QSRIRG++LMALSN +M++TT NKSE++VGY TLYGDM Sbjct: 361 LSIMAPIFAGLQTDVTEENLQSRIRGSVLMALSNKFDSMVITTGNKSEMAVGYATLYGDM 420 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGFNP+KD+YK QV++LA WRN + + + LGP +IP +I+EK+PSAELR +Q D++ Sbjct: 421 NGGFNPIKDIYKMQVYKLAEWRNKNYLQNLLGPKGIIIPSNIIEKAPSAELRENQKDEDF 480 Query: 483 LPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPYPILDDI++ +VE++ S + + + +TV VEHLLY +EYKRRQ+ G KI+ K Sbjct: 481 LPPYPILDDILQSLVEDDMSVCDIVKRGHLRQTVEKVEHLLYLAEYKRRQSAPGVKISYK 540 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI+N FRD Sbjct: 541 NFGRDRRYPITNHFRDK 557 >gi|319408420|emb|CBI82075.1| NH3-dependent NAD synthetase [Bartonella schoenbuchensis R1] Length = 558 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 297/564 (52%), Positives = 383/564 (67%), Gaps = 13/564 (2%) Query: 1 MLKKL-----KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPED 55 M ++L +IA+AQLNPV+GDI GN A A A ++A QG DL+L TELFIS YPPED Sbjct: 1 MTQQLIENDFRIAVAQLNPVIGDIEGNFALAIMAHQKAQEQGADLVLLTELFISAYPPED 60 Query: 56 LVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKI 115 LV K +FI+AC +A+ L T + G GIV+G P + + + N V++L+ G I+A R K Sbjct: 61 LVLKPAFIKACENAVQRLAKVTKN-GPGIVIGVPLRRDDAIYNGVMLLNDGQIVAERLKF 119 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 +LPNY+EF EKR F S +PIV+R I LGI+ICEDIW +S+IC L +GAE + N Sbjct: 120 DLPNYAEFDEKRVFSSDPFLEPIVYRGITLGIVICEDIWSDSSICAQLSNKGAEIILVPN 179 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 SPY +K KR +IV Q +PIIY NQVGGQDEL+FDG SF +GQ ++AFQMKH Sbjct: 180 GSPYTRHKTLKRLDIVRAQAIQSGVPIIYANQVGGQDELVFDGGSFALNGQGKMAFQMKH 239 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F ++ W Q ++ L ADY ACVL LRDYV KN F V Sbjct: 240 FESHIALSHWQRQSIGWQCISGPNEEL------LSGLAADYQACVLGLRDYVNKNCFQDV 293 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 I+GLSGGIDSALCA +AVDALG E V+T+M+PY YTS +SL DA CA+ LGC Y+V+PI Sbjct: 294 ILGLSGGIDSALCATMAVDALGAERVRTVMMPYHYTSQESLRDAEDCARFLGCHYEVIPI 353 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 V F + ++ + + EN+QSR RG ILMALSN +M++TT NKSE++VGY Sbjct: 354 IQPVEGFLNALAPAFSQLKPDLTEENLQSRTRGTILMALSNKFGSMVITTGNKSEMAVGY 413 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGDM+GGFNP+KD+YK QV+ LA WRN + + + LG VIP +I+ K+PSAELR Sbjct: 414 ATLYGDMNGGFNPIKDIYKMQVYALAKWRNKNHLQNLLGAKGVVIPSNIIMKAPSAELRE 473 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPV 534 +Q D++SLPPYPILDDI++ +VE++ S Q + ETV +EHLLY +EYKRRQ+ Sbjct: 474 NQKDEDSLPPYPILDDILQSLVEDDMSVGEIVQCGHLRETVEKIEHLLYLAEYKRRQSAP 533 Query: 535 GTKITAKSFGRDRLYPISNKFRDH 558 G KI++KSFGRDR YPI N+FRD Sbjct: 534 GVKISSKSFGRDRRYPIINRFRDK 557 >gi|163793633|ref|ZP_02187608.1| Glutamine-dependent NAD(+) synthetase [alpha proteobacterium BAL199] gi|159181435|gb|EDP65950.1| Glutamine-dependent NAD(+) synthetase [alpha proteobacterium BAL199] Length = 562 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 256/557 (45%), Positives = 353/557 (63%), Gaps = 8/557 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L I +AQLNP VGDIAGN+ K RR R +A +G D++L EL++ GYPPEDLV K Sbjct: 1 MTDTLTITLAQLNPRVGDIAGNLDKLRRVRAQAAAEGADVVLTPELYLCGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ A++ L +T DGG ++VG P D + N++V+LDAG ++ R K++LPNY Sbjct: 61 MFVAEIRDAVEALARETGDGGPAVLVGAPWLDDGKLYNAMVLLDAGEVVTARYKVDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F++G PI R +R+G+ ICEDIW +I + + + G E L N SP+ Sbjct: 121 GVFDEKRVFVAGPPPGPIDVRGVRIGVPICEDIWTP-DIVECVAETGGEILLIPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ ++ LP++Y+NQ+GGQDEL+FDGASF + + LA QM ++E Sbjct: 180 LGKSDVRVQLAVARVVESGLPLVYLNQIGGQDELVFDGASFVLNPDRSLALQMPAWTEAV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 T W + + D+ P E+ Y A + LRDYV KN F VI+G+S Sbjct: 240 VTTHW-----KRTPDGWTCDTGVRTKQPEG-LESLYCALMTGLRDYVTKNGFPGVILGMS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ AAIAVDALG + V+ +M+P YTS SLEDAAA A+ +G +Y + I + Sbjct: 294 GGIDSAISAAIAVDALGPDKVRCVMMPSPYTSDHSLEDAAAAAEMMGVQYSSINIGPAMQ 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++S+ I EN+Q+R RG LMALSN M+L+T NKSE+SVGY TLYG Sbjct: 354 AFDGMLSEAFAGTKPDITEENLQARSRGITLMALSNKFGHMVLSTGNKSEMSVGYATLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG++ LKD+YK VF L+SWRNS+ GLGP ++P I+ K PSAELRP Q D+ Sbjct: 414 DMCGGYSVLKDVYKMTVFALSSWRNSNKPAGGLGPDGPIMPERIITKPPSAELRPDQKDE 473 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYP+LD I+ ++ENE ++ ++ +TV + +L +EYKRRQAP G K+T Sbjct: 474 DSLPPYPVLDAILMELIENESPIATIVEKGFDSDTVLRIWRMLDRAEYKRRQAPPGVKVT 533 Query: 540 AKSFGRDRLYPISNKFR 556 A+SFGRDR YP++N F+ Sbjct: 534 ARSFGRDRRYPLTNAFQ 550 >gi|328544366|ref|YP_004304475.1| NAD synthase family [polymorphum gilvum SL003B-26A1] gi|326414108|gb|ADZ71171.1| NAD synthase family [Polymorphum gilvum SL003B-26A1] Length = 562 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 276/558 (49%), Positives = 373/558 (66%), Gaps = 7/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++A+AQLNPVVGD+AGN R+AR A +G L+L +EL ++GYPPEDLV K + Sbjct: 10 TDRFRLAVAQLNPVVGDVAGNAELVRQARARAAAEGAHLVLCSELVLAGYPPEDLVLKPA 69 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++AC +A + L +T DGG ++VG P D + N+V++LDAG I AVR K++LPNY Sbjct: 70 FLRACRAAAEDLARETADGGPALIVGTPWIDDGKLHNAVLLLDAGRIQAVRYKVDLPNYG 129 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F G P+ FR +RLG+ ICED W + +C+ L + GAE L N SPY+ Sbjct: 130 VFDEKRVFAPGPMPGPVDFRGVRLGLPICEDAWTD-EVCECLAETGAEILLVPNGSPYWA 188 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 NK ++R +++ ++ LP++Y NQ+GGQDEL+FDG SF ++LAFQM F Sbjct: 189 NKAEERLQVMVARVVESGLPLVYCNQLGGQDELVFDGGSFALQADRRLAFQMPQFRTDLA 248 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +T+W D +P +E + ACV+ LRDYV K+ F VI+GLSG Sbjct: 249 VTDWQRDAD----GKWVCAGGPLARLPEIDEAN-WLACVVGLRDYVDKSRFPGVILGLSG 303 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAA+AVDALG E V +M+PY+YTS S+ DA ACA+ L +YD +PI V Sbjct: 304 GIDSAVCAAMAVDALGPERVHGVMMPYRYTSRASIVDAEACARKLAIRYDTVPIEIPVAG 363 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F ++ P+ EN+QSR RG +LMA+SN M++TT NKSE+SVGY TLYGD Sbjct: 364 FTEVLGPLFHGRPADTTEENLQSRSRGVVLMAISNKFGYMVVTTGNKSEMSVGYATLYGD 423 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GG+NP+KDLYKTQV+QLA+WRN++ LGP EVIP +I+ K PSAELR +QTDQ+ Sbjct: 424 MNGGYNPVKDLYKTQVYQLAAWRNANRPEGVLGPAGEVIPHNIIAKVPSAELRENQTDQD 483 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLP Y +LDDI+ +VENE + + ++ T+ VE+LLY +EYKRRQAP G KIT Sbjct: 484 SLPSYDVLDDILACLVENEMAVSEIEARGHDRATIHRVENLLYVAEYKRRQAPPGVKITR 543 Query: 541 KSFGRDRLYPISNKFRDH 558 ++FGRDR YPI+N+FRD Sbjct: 544 RNFGRDRRYPITNRFRDR 561 >gi|217976322|ref|YP_002360469.1| NAD synthetase [Methylocella silvestris BL2] gi|217501698|gb|ACK49107.1| NAD+ synthetase [Methylocella silvestris BL2] Length = 576 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 283/558 (50%), Positives = 362/558 (64%), Gaps = 8/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L I +AQ++ VGDIAGN+A+ R AR EA G D+++F+ELFI+GYPPEDLV K Sbjct: 1 MTDTLVIGLAQIDSTVGDIAGNVARVRAARTEAAGFGADVVMFSELFIAGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++AC +A+D L DT DGG I+VG P + N+ +LD G + AVR K++LPNY Sbjct: 61 AFLEACRAALDDLARDTADGGPAILVGVPLVENGLAYNAYALLDGGRVEAVRYKVDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G P+ R +R+G+ ICEDIW + + + + G E L N SPY+ Sbjct: 121 GVFDEKRVFAPGPMPGPLTLRGVRIGVPICEDIWGP-DPVECIAETGGEILLVPNGSPYW 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R IV ++ LP+IY+NQVGGQDEL+FDGASF + + LAFQ+ F+ Sbjct: 180 RGKADERLAIVAARVVESGLPLIYLNQVGGQDELVFDGASFGLNADRTLAFQLPAFTSVV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 T W + EADY+ACV+ LRDYV+KN F V++GLS Sbjct: 240 ARTVWRRGDNGFVCVEGPKAAIEQGE------EADYSACVVGLRDYVEKNGFPGVVLGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSALCAA+AVDALG V +MLPY+YTS +SL DA CAKALG +YD+LPI +V+ Sbjct: 294 GGIDSALCAAMAVDALGAARVHCVMLPYRYTSNESLFDAEGCAKALGVRYDILPIEPIVS 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + P G+ ENIQSR+RG LMA+SN AML+TT NKSE+SVGY T+YG Sbjct: 354 GFETTLRPLFAGTPPGLTEENIQSRVRGATLMAISNKFGAMLVTTGNKSELSVGYATIYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNPLKDLYK +VF+L RN LGP VIP +IL K PSAELR +Q DQ Sbjct: 414 DMNGGFNPLKDLYKMEVFRLCRLRNRWKPKGALGPDGVVIPENILVKPPSAELRENQKDQ 473 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD I++ +VE E + + ETV+ VE LLY +EYKRRQ+ G K+T Sbjct: 474 DSLPPYEELDAILEGLVEKEMRVSDLIAAGFTAETVKKVERLLYLAEYKRRQSAPGVKVT 533 Query: 540 AKSFGRDRLYPISNKFRD 557 K+FGRDR YPI NKFRD Sbjct: 534 KKNFGRDRRYPILNKFRD 551 >gi|158422537|ref|YP_001523829.1| NAD synthetase [Azorhizobium caulinodans ORS 571] gi|158329426|dbj|BAF86911.1| NAD+ synthase [Azorhizobium caulinodans ORS 571] Length = 566 Score = 645 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 268/555 (48%), Positives = 360/555 (64%), Gaps = 9/555 (1%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L+IA+AQLNPVVGD+AGN K R AR+EA QG DL++F+ELF++GYPPEDLV K +F Sbjct: 18 TLRIAVAQLNPVVGDVAGNAEKVRMARDEAALQGADLVVFSELFLAGYPPEDLVLKPAFQ 77 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 QAC +A+D L ++T GG ++VG P + + N V +L+ G I A R K++LPNY F Sbjct: 78 QACRAALDELAAETV-GGPALLVGAPWVEDGHLHNGVFLLEGGRIAAKRFKVDLPNYGVF 136 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F+ G PI F+ +RLG+ +CEDIW ++ + L + GAE L N SPY + Sbjct: 137 DEKRVFVPGPLPGPIPFKGVRLGVPVCEDIWGP-DVVECLSETGAEILIVPNGSPYRRSV 195 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +R I ++ LP++YVNQVGGQDEL+FDGASF + + Q F+E+ T Sbjct: 196 YDERANIAVARVVESGLPLLYVNQVGGQDELVFDGASFALNADRTQVMQFPGFAERVRTT 255 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +W N + A + Y ACVL L+DYV KN F V++GLSGGI Sbjct: 256 QWR-----RYENGWKCEEAPFADRLEGDRAD-YAACVLGLKDYVNKNRFPGVVLGLSGGI 309 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSA+CAA+AVDALG E V IMLPY++TS SL DAA A+ LG +YD LPI V Sbjct: 310 DSAICAAMAVDALGPERVHCIMLPYRFTSQDSLSDAADVARRLGVRYDTLPIAPAVEALE 369 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 +++ + EN+QSR+RG +LM++SN AM++TT NKSE+S GY TLYGDM+ Sbjct: 370 GVLAPLFAGRERDVTEENLQSRVRGTLLMSVSNKFGAMVVTTGNKSEMSTGYATLYGDMN 429 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GG+NP+KDLYKT+VF+L+ RN+ T LGP VIP ++++K P+AELR +Q DQ+SL Sbjct: 430 GGYNPIKDLYKTEVFRLSRLRNTWKPTGALGPDGIVIPDALIDKPPTAELRENQKDQDSL 489 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD I+ R+VE E ++ V+ VE +L +EYKRRQA G K+T ++ Sbjct: 490 PPYEVLDAILARLVEAETPVAQLIADGFDPAVVKRVERMLNIAEYKRRQAAPGVKVTTRN 549 Query: 543 FGRDRLYPISNKFRD 557 FGRDR YPI+N FRD Sbjct: 550 FGRDRRYPITNGFRD 564 >gi|182677746|ref|YP_001831892.1| NAD synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|182633629|gb|ACB94403.1| NAD+ synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 557 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 275/557 (49%), Positives = 367/557 (65%), Gaps = 8/557 (1%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L IA+AQ+N VGDI GN+A+ R AR +A+ G DL++F+ELFISGYPPEDLV K SF Sbjct: 8 DRLVIALAQINSTVGDIDGNLARIREARAKAHGFGADLVMFSELFISGYPPEDLVLKPSF 67 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 AC A + L +T DGG I+VG P + N+ +L G I A+R K++LPNY Sbjct: 68 QDACRVACENLARETADGGPAILVGLPWGELGACYNAYALLAHGRIEAMRFKVDLPNYGV 127 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F +G PI+F+ +R+GI ICEDIW + + + + G E L N SPY+ + Sbjct: 128 FDEKRVFRAGPLQGPIIFKGVRIGIPICEDIWGP-DPVECIAETGGEILLVPNGSPYWES 186 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K +R +V +IS HLP+IY+NQ+GGQDEL+FDGA+F + LA Q+ F Sbjct: 187 KSSERLSVVKARISETHLPLIYLNQLGGQDELVFDGATFALNADGTLACQLPAFEAIIAK 246 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 T W ++ ++ T I + + Y AC+L LRDYV+K F V++GLSGG Sbjct: 247 TVWER----RGDTFVCVEAPKTQVIEGDDAD--YTACMLGLRDYVEKIGFPGVVLGLSGG 300 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +DSALCAA+AVDALG+E V +MLPY+YTS +SL DA ACA ALG +YD++PI V F Sbjct: 301 VDSALCAALAVDALGREKVHAVMLPYRYTSQESLIDAKACATALGLRYDIVPIAPAVEGF 360 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 +L++ G+ EN+QSR RG +LM++SN +ML+TT NKSE+SVGY T+YGDM Sbjct: 361 ETLLAPMFAGTAPGLTEENLQSRTRGTVLMSISNKFGSMLVTTGNKSEMSVGYATIYGDM 420 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGFNP+KD+YKTQVF+L RN LGP EVIP +I+ K PSAELR +Q DQ+S Sbjct: 421 NGGFNPIKDIYKTQVFRLCHLRNRWKPKGALGPDGEVIPYNIIVKPPSAELRENQKDQDS 480 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY ILD I++ +VE ++ + Y + T+R VE LLY +EYKRRQ+ G K+T + Sbjct: 481 LPPYDILDGILEGLVEKDQGVADLVAAGYEEPTIRRVERLLYLAEYKRRQSAPGVKVTRR 540 Query: 542 SFGRDRLYPISNKFRDH 558 +FGRDR YPI N FRD Sbjct: 541 NFGRDRRYPIVNGFRDR 557 >gi|254503440|ref|ZP_05115591.1| NAD synthase family [Labrenzia alexandrii DFL-11] gi|222439511|gb|EEE46190.1| NAD synthase family [Labrenzia alexandrii DFL-11] Length = 555 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 272/561 (48%), Positives = 378/561 (67%), Gaps = 10/561 (1%) Query: 1 ML-KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M ++A+AQLNP VGD+AGN R+AR +A Q DL+L +EL ++GYPPEDLV K Sbjct: 1 MTINSFRLAVAQLNPTVGDVAGNAELVRQARADAKAQQSDLVLTSELMLAGYPPEDLVLK 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGVLNSVVILDAGNIIAVRDKINLP 118 +F++ C L +T DGG +++G P D + N+V+++D G + AVR K +LP Sbjct: 61 PAFVRECMETARALAEETGDGGPAVILGTPWYSDAGDLHNAVLLIDQGEVKAVRYKSDLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F EKR F +G P+ FR +R+G+ ICEDIW + +C+ L++ GAE L N SP Sbjct: 121 NYGVFDEKRVFKAGPLPGPVDFRGVRIGLPICEDIWND-EVCECLEETGAEILLVPNGSP 179 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y+ N+ ++R ++V ++ LP++Y NQ+GGQDEL+FDG SF + LAFQM F Sbjct: 180 YWENRAEERLQVVVARVVQTDLPLVYCNQLGGQDELVFDGGSFALQADRSLAFQMPQFET 239 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 +++W D + S S +P +E + ACVL L DYV KN F V++G Sbjct: 240 ALGISDWKRDG-----EAWTCTSGSVAKLPDLDEAN-WRACVLGLGDYVTKNGFPGVVLG 293 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSA+CAA+AVDALG + V +IMLP++YTS +S++DAA CAKALG +YD +PI + Sbjct: 294 LSGGIDSAVCAAMAVDALGADKVHSIMLPFRYTSEESIKDAADCAKALGLRYDTVPIAEP 353 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F + +G+ EN+QSR RG ILMA+SN M++TT NKSE+SVGY TL Sbjct: 354 VEGFTKALDGLFAGTEAGVTEENLQSRTRGVILMAVSNKFGHMVMTTGNKSEMSVGYATL 413 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GG+NP+KDLYKTQV+ L++WRN++ LGP EVIP +I+ K P+AELR +QT Sbjct: 414 YGDMNGGYNPIKDLYKTQVYHLSAWRNANKPAGLLGPDGEVIPSNIITKVPTAELRENQT 473 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLP Y +LDDI++ +VE E S + ++ ++ + + +EHLLY +EYKRRQAP G K Sbjct: 474 DQDSLPAYDVLDDILECLVEKEMSVGDIEKRGHSRDLIHRIEHLLYIAEYKRRQAPPGVK 533 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 IT ++FGRDR YPI+N+FRD Sbjct: 534 ITERNFGRDRRYPITNRFRDR 554 >gi|110633816|ref|YP_674024.1| NAD synthetase [Mesorhizobium sp. BNC1] gi|110284800|gb|ABG62859.1| NH(3)-dependent NAD(+) synthetase [Chelativorans sp. BNC1] Length = 572 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 305/560 (54%), Positives = 398/560 (71%), Gaps = 6/560 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +IA+AQLNP VGDI GN+AKAR AR +A R+G DL+LFTELFI+GYPPEDLV K +F+ Sbjct: 12 FRIAVAQLNPTVGDIPGNLAKAREARADAARKGADLVLFTELFIAGYPPEDLVLKPAFVA 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L ++T DGG G+++G P + + GV N+VV+LD G +IA R K++LPNY EF Sbjct: 72 ACEKAVLELAAETADGGPGVIIGTPLKRESGVHNAVVVLDDGKVIAERYKLDLPNYGEFD 131 Query: 125 EKRTFISGYS-NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F + S P+ FR +R+GI ICEDIW ++C+ L + GAE L N SPYY K Sbjct: 132 EKRVFDAAPSMPGPVNFRGVRIGIPICEDIWGKLDVCETLAESGAEILLVPNGSPYYRGK 191 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++ R ++V Q+ LPI+Y N +GGQDEL+FDGASF + LAFQM F E +T Sbjct: 192 VEVRQQVVIVQVIESGLPIVYANMLGGQDELVFDGASFAIQADKSLAFQMSQFEEAVAVT 251 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPL----QEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 W + + DD P+ ++EEADY AC+L LRDYV KN F V++GL Sbjct: 252 TWRRGRDAAGAQRGKDDEWVCAEGPMAIIPEKEEADYRACMLGLRDYVNKNGFKNVVLGL 311 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGG+DSALCAA+AVDALG+E V+ +MLPY+YTS +SL DA ACA+ALGC+YD++PI++ V Sbjct: 312 SGGVDSALCAALAVDALGEERVRAVMLPYRYTSKESLRDAEACARALGCRYDIVPINEPV 371 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + + Q + GI EN+QSR RG +LMA+SN +M++TT NKSE+SVGY TLY Sbjct: 372 EGFRNALGQLFEGTEEGITEENLQSRARGTLLMAISNKFGSMVVTTGNKSEMSVGYATLY 431 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGFNP+KDLYK QV+ L WRN+H + LGP EVIP SI++K+PSAELR +QTD Sbjct: 432 GDMNGGFNPIKDLYKMQVYALCRWRNAHVPPTALGPSGEVIPASIIDKAPSAELRENQTD 491 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY +LDDI++ +VENE + ++ + V +EHLLY +EYKRRQA G KI Sbjct: 492 QDSLPPYAVLDDILECLVENELGVDEIVARGHDRDLVHRIEHLLYVAEYKRRQAAPGVKI 551 Query: 539 TAKSFGRDRLYPISNKFRDH 558 T K+FGRDR YPI+NKFRD Sbjct: 552 TKKNFGRDRRYPITNKFRDR 571 >gi|306840502|ref|ZP_07473261.1| NAD+ synthetase [Brucella sp. BO2] gi|306289517|gb|EFM60735.1| NAD+ synthetase [Brucella sp. BO2] Length = 518 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 280/522 (53%), Positives = 359/522 (68%), Gaps = 7/522 (1%) Query: 38 MDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL 97 DLILFTELFISGYPPED+V K +F+ AC A+ L +DT DGG G+++G P G Sbjct: 3 ADLILFTELFISGYPPEDMVLKPAFVAACEKAVRMLAADTADGGPGVIIGTPLHRDSGSH 62 Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS 157 N+V +LD G IIA R K++LPNY EF EKR F G P+ FR +RLGI +CEDIW Sbjct: 63 NAVAVLDGGEIIAERFKVDLPNYGEFDEKRVFEPGPMPGPVNFRGVRLGIPVCEDIWGEL 122 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + L + GAE L N SPY+ K+ +RH++V Q+ LPI+Y NQVGGQDEL+FD Sbjct: 123 GVAETLAESGAEILLVPNGSPYHRAKMDRRHQVVLKQVIETGLPIVYANQVGGQDELVFD 182 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYN 277 G SF F+ + L QM F+EQ +TEW D + S + ADY Sbjct: 183 GGSFVFNADKSLCLQMPQFAEQIALTEWQRDGDGWRCGDGEKASLP------EGLAADYA 236 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 AC+L LRDYV KN F V++GLSGGIDSA+CAA+ VDALGK+ V+ +MLPY+YTS +SL Sbjct: 237 ACMLGLRDYVNKNGFKDVVLGLSGGIDSAICAALGVDALGKDRVRCVMLPYRYTSEESLA 296 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 DAA CA+ALG +YD++PI + V F + + SG+ EN+QSR RG ILMA+SN Sbjct: 297 DAADCARALGVRYDIVPIAEPVEGFMNALQPLFSGTDSGVTEENLQSRARGTILMAISNK 356 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 +M++TT NKSE+SVGY TLYGDM+GGFNP+KD+YK QV+ L+ WRN H LGP Sbjct: 357 FGSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDVYKMQVYALSQWRNHHLPQGALGPAG 416 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVR 516 EVIP +I+ K+PSAELR +QTDQ+SLPPYP+LDDI++ +VENE S + + ETV+ Sbjct: 417 EVIPQNIISKAPSAELRENQTDQDSLPPYPVLDDILECLVENEMSNAEIVARGHALETVQ 476 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 +EHLLY +EYKRRQ+ G KIT K+FGRDR YPI+N+FRD Sbjct: 477 RIEHLLYLAEYKRRQSAPGVKITKKNFGRDRRYPITNRFRDR 518 >gi|90423585|ref|YP_531955.1| NAD synthetase [Rhodopseudomonas palustris BisB18] gi|90105599|gb|ABD87636.1| NH(3)-dependent NAD(+) synthetase [Rhodopseudomonas palustris BisB18] Length = 587 Score = 637 bits (1644), Expect = e-180, Method: Composition-based stats. Identities = 281/565 (49%), Positives = 371/565 (65%), Gaps = 15/565 (2%) Query: 1 MLKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF 58 M ++ KI +AQLNP VGDIAGN AR AR A G LI+F ELFISGYPPEDLV Sbjct: 4 MTEQADFKITLAQLNPTVGDIAGNAGLARAARARAAADGAQLIVFPELFISGYPPEDLVL 63 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 K +F AC +A++ L DT DGG ++VG P D + N+ +LDAG I A+R K+NLP Sbjct: 64 KPAFQAACRAAVEDLARDTADGGPAMLVGSPWVDGGKLYNACALLDAGAIAAIRFKVNLP 123 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFS 173 NY F EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L Sbjct: 124 NYGVFDEKRVFCRGPVSGPVTIRGVRVGVPICEDTWMEESADYENVVECLAETGAEILIV 183 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 N SPY K R + +++ LP+IYVNQVGGQDEL+FDGASF + + LA Q+ Sbjct: 184 PNGSPYARGKADLRLSVQVARVTESDLPLIYVNQVGGQDELVFDGASFALNADRTLAAQL 243 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F + W + + + ++++EADY ACVL LRDYV KN F Sbjct: 244 PAFEQSLTTLRWVNGDSGWRCD-------GAIAPVIEDDEADYAACVLGLRDYVNKNGFP 296 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 V++G+SGGIDSALCAAIAVDALG E V+ +MLP+++T+ SL+DAA A ALG KY+VL Sbjct: 297 GVLLGISGGIDSALCAAIAVDALGVERVRGVMLPFRFTAQVSLDDAAKLAGALGFKYEVL 356 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI VN F +++ + P I EN+Q+R RG +LMA+SN + AM++TT NKSE+SV Sbjct: 357 PIAQAVNGFEEILAGTFRGLPRDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSV 416 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDM+GGFNP+KD+YKT+VF+L + RN+ LGP EVIP +I+ + P+AEL Sbjct: 417 GYATLYGDMNGGFNPIKDIYKTEVFRLCTLRNAWKPDGALGPSGEVIPVNIITRPPTAEL 476 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQA 532 R +QTDQ+SLPPY ILD I++R+VE E+ ++ +TV ++ LL +EYKRRQA Sbjct: 477 RENQTDQDSLPPYDILDGILERLVEREQPLAEIVAAGFDRDTVVRIDRLLNIAEYKRRQA 536 Query: 533 PVGTKITAKSFGRDRLYPISNKFRD 557 G K+T K+FGRDR YPI+N+FRD Sbjct: 537 APGVKVTRKNFGRDRRYPITNRFRD 561 >gi|27378891|ref|NP_770420.1| NAD synthetase [Bradyrhizobium japonicum USDA 110] gi|27352040|dbj|BAC49045.1| NAD synthetase [Bradyrhizobium japonicum USDA 110] Length = 585 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 275/567 (48%), Positives = 369/567 (65%), Gaps = 16/567 (2%) Query: 1 MLKKLK---IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLV 57 M ++L + +AQLNP VGD+ GN A+AR AR A G DL+LF ELFI+GYPPEDLV Sbjct: 1 MTERLNAFAVTLAQLNPTVGDVEGNAARARAARVRAAADGADLVLFPELFIAGYPPEDLV 60 Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 K +F AC +AI+ L +T DGG ++VG P + + N+ +LD G I +R K NL Sbjct: 61 QKPAFQAACRAAIEGLARETADGGPAMLVGTPWVEDGKLYNACALLDGGRIAGLRFKCNL 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLF 172 PNY F EKR F G + P+ R +R+G+ ICEDIW N+ + L + GAE + Sbjct: 121 PNYGVFDEKRLFARGPAAGPVTVRGVRIGVPICEDIWLDESEDYENVVETLAETGAEIIL 180 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 N SPY +K R + +++ LP++Y+NQV GQDEL+FDGASF +G LA Q Sbjct: 181 VPNGSPYARDKNDVRLSVAVARVTESGLPLVYLNQVCGQDELVFDGASFALNGDLSLAAQ 240 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 + F+E + + + + A + + + ADY ACVL LRDYV KN F Sbjct: 241 LPAFAESITTLRFTRNGEDWRC-------AGPIAAQPEGDHADYAACVLGLRDYVAKNGF 293 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 V++G+SGGIDSALCAAIAVDALG + V +MLPY+YT+ S+ DA A LG +Y+V Sbjct: 294 PGVLLGISGGIDSALCAAIAVDALGADQVHGVMLPYRYTAASSIADAGELAGHLGIRYEV 353 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 LPI + V F +++S + P I EN+Q+R RG +LMA+SN + M++TT NKSE+S Sbjct: 354 LPIAEAVTGFETILSGIFKNLPPDITEENLQARTRGTLLMAISNKTGLMVVTTGNKSEMS 413 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGDM+GGFNP+KD+YKTQVF+LA+ RNS GLGP EVIPP I+ + P+AE Sbjct: 414 VGYATLYGDMNGGFNPIKDIYKTQVFRLAALRNSWRPEGGLGPAGEVIPPDIITRPPTAE 473 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LR +QTDQ+SLP Y +LD I++R+VE EE ++ ETV ++HLL +EYKRRQ Sbjct: 474 LRENQTDQDSLPTYDVLDAILERLVEREEPLDQIIAAGFDRETVTRIDHLLNVAEYKRRQ 533 Query: 532 APVGTKITAKSFGRDRLYPISNKFRDH 558 A G K+T ++FGRDR YPI+N+FRD Sbjct: 534 AAPGVKVTPRNFGRDRRYPITNRFRDK 560 >gi|288940531|ref|YP_003442771.1| NAD+ synthetase [Allochromatium vinosum DSM 180] gi|288895903|gb|ADC61739.1| NAD+ synthetase [Allochromatium vinosum DSM 180] Length = 536 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 235/551 (42%), Positives = 330/551 (59%), Gaps = 19/551 (3%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +I I Q+NP+VGD+AGN + A A+ G+DL++ EL ++GYPPEDL+ + FI Sbjct: 4 RIEILQMNPLVGDVAGNAERLIAAARRAHASGIDLLVCPELALTGYPPEDLLLRPEFIAR 63 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A++ L+S+ G +V G+PR G+ N ++ G +IA K +LPNYS F E Sbjct: 64 VETALERLQSEIR--GITLVFGYPRASVGGLFNVAGVIRDGTLIAEYAKQHLPNYSVFDE 121 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 KR F G +R G+ +CEDIW + + GA+ L +LNASP++ K+ Sbjct: 122 KRYFQPGTGATVFEQCGLRFGLSVCEDIWW-EEPTREAAEAGAQVLLNLNASPFHGGKIA 180 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW 245 +R +V + L I+Y N VGGQDEL+FDGASF D ++ + F+E + Sbjct: 181 EREALVARRARAHGLTILYANLVGGQDELVFDGASFVVDPDGRITHRAGLFTETTLALKL 240 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 D + EEE Y A VL +RDYV+KN F ++GLSGGIDS Sbjct: 241 DADGVPVRAGTEPLTDWP------GEEETIYEALVLGVRDYVRKNGFEGAVLGLSGGIDS 294 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 AL AIAVDALG + V+ +++P +YT+ S EDA A+ LG V+PI + F + Sbjct: 295 ALTLAIAVDALGADRVEAVLMPSRYTADMSNEDALEQARRLGVSTRVIPIEPAFHAFLDM 354 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + +P + ENIQ+R RG ILMA+SN S +LLTT NKSE++VGY TLYGDM+GG Sbjct: 355 LEPVFAGQPVDVTEENIQARCRGIILMAISNKSGRILLTTGNKSEMAVGYATLYGDMAGG 414 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 F P+KD+ K V++LA +RN VIP ++E++PSAELRP QTDQ+SLPP Sbjct: 415 FAPIKDVPKMLVYRLARYRNGRSP---------VIPERVIERAPSAELRPDQTDQDSLPP 465 Query: 486 YPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 Y +LD I+KR +E++ES + Q Y + VR V L+ +EYKRRQAP G +I+ ++FG Sbjct: 466 YDLLDAILKRYIEDDESVEDIVAQGYPADVVRRVARLVDRNEYKRRQAPPGVRISRRAFG 525 Query: 545 RDRLYPISNKF 555 RDR YPI++ F Sbjct: 526 RDRRYPITSGF 536 >gi|15644009|ref|NP_229058.1| NAD synthetase [Thermotoga maritima MSB8] gi|8928238|sp|Q9X0Y0|NADE2_THEMA RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|4981808|gb|AAD36328.1|AE001780_12 NH(3)-dependent NAD(+) synthetase [Thermotoga maritima MSB8] Length = 576 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 221/584 (37%), Positives = 330/584 (56%), Gaps = 34/584 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K+L++ +AQLNP +GD GN+ KA A A +G DL++F ELF+ GYPPEDL+ + S Sbjct: 1 MKRLRVTLAQLNPTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGYPPEDLMLRLS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ + T + G +++GF D++ N+ ++ G I+ V KI+LPNY Sbjct: 61 FLRENRKYLQKFAQHTRNLGVTVLMGFIDSDEDA-YNAAAVVKDGEILGVYRKISLPNYG 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK-QGAEFLFSLNASPYY 180 F E+R F G + +I++G+ ICEDIW L +G + +L+ASPY+ Sbjct: 120 VFDERRYFKPGEELLVVKIGNIKVGVTICEDIWNPVEPSASLSLGEGVHLIANLSASPYH 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ + H+ + Y N VGGQDEL+FDG S D ++ K F E+ Sbjct: 180 VGKPVLRKDYLSMKAYDYHVAMAYCNMVGGQDELVFDGGSMVVDASGEVINYGKLFEEEI 239 Query: 241 FMTEWHYDQQLS------------------------QWNYMSDDSASTMYIPLQEEEADY 276 + D+ L S + EE + Sbjct: 240 ITVDLDLDENLRVSLVDPRRRYMKTQNYPVKTVEAGNLREKSGHFEPVVNPLPVREEEMF 299 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A + LRDYV+KN F KV+IGLSGG+DS+L A IA +ALGKENV+ +++P YTS +S+ Sbjct: 300 RALITGLRDYVRKNGFEKVVIGLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKESI 359 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 EDA AK LG + ++PI D+ + + + I EN+Q+RIRGN LMALSN Sbjct: 360 EDAQTLAKNLGIETFIIPITDVFHSYLETLKGVFAGREPDITEENLQARIRGNYLMALSN 419 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++LTT NKSE++ GY TLYGDM+GGF +KD+YKT V+++ W NS Sbjct: 420 KFGWLVLTTGNKSEMATGYATLYGDMAGGFAVIKDVYKTDVYRIGRWYNSWRG------- 472 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETV 515 E+IP +I K P+AELRP QTDQE LPPY +LD+I++ +E + ++ +TV Sbjct: 473 KEIIPENIFVKPPTAELRPGQTDQEKLPPYEVLDEILRLYIEEGLDPEEIASKGFDRKTV 532 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V ++ +EYKR+QA +G KI+ ++FG+D PI+N+F++ + Sbjct: 533 LDVTEMIRKNEYKRKQAAIGVKISTRAFGKDWRMPITNRFKEPL 576 >gi|170289348|ref|YP_001739586.1| NAD+ synthetase [Thermotoga sp. RQ2] gi|281412952|ref|YP_003347031.1| NAD+ synthetase [Thermotoga naphthophila RKU-10] gi|170176851|gb|ACB09903.1| NAD+ synthetase [Thermotoga sp. RQ2] gi|281374055|gb|ADA67617.1| NAD+ synthetase [Thermotoga naphthophila RKU-10] Length = 576 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 221/584 (37%), Positives = 330/584 (56%), Gaps = 34/584 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K+L++ +AQLNP +GD GN+ KA A A +G DL++F ELF+ GYPPEDL+ + S Sbjct: 1 MKRLRVTLAQLNPTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGYPPEDLMLRLS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ + T + G +++GF D++ N+ ++ G I+ V KI+LPNY Sbjct: 61 FLRENRKYLQKFAQHTRNLGVTVLMGFIDSDEDA-YNAAAVVKGGEILGVYRKISLPNYG 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK-QGAEFLFSLNASPYY 180 F E+R F G + +I++G+ ICEDIW L +G + +L+ASPY+ Sbjct: 120 VFDERRYFKPGEELLVVKIGNIKVGVTICEDIWNPVEPSASLSLGEGVHLIANLSASPYH 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ + H+ + Y N VGGQDEL+FDG S D ++ K F E+ Sbjct: 180 VGKPVLRKDYLSMKAYDYHVAMAYCNMVGGQDELVFDGGSMVVDASGEVINYGKLFEEEI 239 Query: 241 FMTEWHYDQQLS------------------------QWNYMSDDSASTMYIPLQEEEADY 276 + D+ L S + EE + Sbjct: 240 ITVDLDLDENLRVSLVDPRRRYMKTQNYPVKTVEAGNLREKSGHFEPVVNPLPVREEEMF 299 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A + LRDYV+KN F KV+IGLSGG+DS+L A IA +ALGKENV+ +++P YTS +S+ Sbjct: 300 RALITGLRDYVRKNGFEKVVIGLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKESI 359 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 EDA AK LG + ++PI D+ + + + I EN+Q+RIRGN LMALSN Sbjct: 360 EDAQTLAKNLGIETFIIPITDVFHSYLETLKGVFAGREPDITEENLQARIRGNYLMALSN 419 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++LTT NKSE++ GY TLYGDM+GGF +KD+YKT V+++ W NS Sbjct: 420 KFGWLVLTTGNKSEMATGYATLYGDMAGGFAVIKDVYKTDVYRIGRWYNSWRG------- 472 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETV 515 E+IP +I K P+AELRP QTDQE LPPY +LD+I++ +E + ++ +TV Sbjct: 473 KEIIPENIFVKPPTAELRPGQTDQEKLPPYEVLDEILRLYIEEGLDPEEIASKGFDRKTV 532 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V ++ +EYKR+QA +G KI+ ++FG+D PI+N+F++ + Sbjct: 533 LDVTEMIRKNEYKRKQAAIGVKISTRAFGKDWRMPITNRFKEPL 576 >gi|238753908|ref|ZP_04615268.1| NAD+ synthase [Yersinia ruckeri ATCC 29473] gi|238707896|gb|EEQ00254.1| NAD+ synthase [Yersinia ruckeri ATCC 29473] Length = 549 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 233/556 (41%), Positives = 341/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 10 MSRSLSIALAQLNLLVGDIEGNTERMLQTLHEQQKAGADLVMFSELSLSGYPPEDLLYRS 69 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F C + ++ L++ + ++VG P ++ + + N++ + AG ++ K LPNY Sbjct: 70 DFYLRCEAQLERLRAASQT--VAVLVGHPWREGDKLYNALSLFSAGKLLGRYFKQQLPNY 127 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + + + RLG+LICED+W S K GAE L S+NASPY Sbjct: 128 GVFDEKRYFTPGDKSCVVELKGYRLGLLICEDLW-FSEPVDAAKAAGAELLLSINASPYN 186 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ +P++Y+NQVGGQDELIFDG S FD + + ++ F+EQ Sbjct: 187 REKPYIRKTLMASHCQRTQMPLVYLNQVGGQDELIFDGCSKVFDSKGNMTHRLAAFAEQT 246 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + D + + D + + Y A VL++RDYV KN F ++GLS Sbjct: 247 TLCQLQ-DLVVEPMAAPAADLSPLAEV--------YEALVLAVRDYVTKNGFKGAVLGLS 297 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGKE VQ +M+P++YT+ S+ DA A+ LG ++D+L I + + Sbjct: 298 GGIDSALTLAIAVDALGKEKVQALMMPFRYTADISIADAKEEAEILGIEFDLLSIEPMFD 357 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 358 AFMGQLAPMFAGTEKDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 417 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VFQL +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 418 DMAGGFDVLKDVPKTLVFQLCEYRNT---------VSYVIPQRVIDRPPSAELAPDQLDQ 468 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE++ES + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 469 DSLPPYDILDAILEGYVEHDESVADLVANGFDESIVRKVIRLVDINEYKRRQSAVGPRIT 528 Query: 540 AKSFGRDRLYPISNKF 555 A+SFG+DR YPI++ F Sbjct: 529 ARSFGKDRRYPITSGF 544 >gi|115524006|ref|YP_780917.1| NAD synthetase [Rhodopseudomonas palustris BisA53] gi|115517953|gb|ABJ05937.1| NH(3)-dependent NAD(+) synthetase [Rhodopseudomonas palustris BisA53] Length = 587 Score = 631 bits (1628), Expect = e-178, Method: Composition-based stats. Identities = 274/557 (49%), Positives = 368/557 (66%), Gaps = 13/557 (2%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 + +AQLNP VGDIAGN AKAR AR +A G DLI+F ELF+SGYPPEDLV K +F AC Sbjct: 12 VTLAQLNPTVGDIAGNAAKARVARAQARDDGADLIVFPELFLSGYPPEDLVLKPAFQAAC 71 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +A++ L +T DGG +++G P D + N+ +LDAG I ++R K+NLPNY F EK Sbjct: 72 RAAVEELARETADGGPAMLIGSPWVDDGRLYNACALLDAGAIASIRYKVNLPNYGVFDEK 131 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNS-----NICKHLKKQGAEFLFSLNASPYYH 181 R F G + P+ R +R+G+ ICED W N+ + L + GAE L N SPY Sbjct: 132 RVFARGPVSGPMTIRGVRVGVPICEDTWMEESADYENVVECLAETGAELLIVPNGSPYAR 191 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K R + +++ LP++Y+NQVGGQDEL+FDGASF + LA Q+ F E Sbjct: 192 GKNDIRLAVQVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADCSLAAQLPGFRESVV 251 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 W+ + + L +E DY ACVL LRDYV+KN F V++G+SG Sbjct: 252 TLRWNKTNTGWRCE-------GPVAPLLDGDEGDYAACVLGLRDYVRKNGFPGVLLGVSG 304 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSALCAAIAVDALG + ++ +MLP++YT+ SL+DAA A ALG Y VLPI V Sbjct: 305 GIDSALCAAIAVDALGADKLRGVMLPFRYTAQVSLDDAAKLAAALGFNYAVLPIAQAVEG 364 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F +++++ + P I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TLYGD Sbjct: 365 FEAILAETFKGLPRDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATLYGD 424 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YKT+VF+L+S RN LGP EVIP +I+ + P+AELR +QTDQ+ Sbjct: 425 MNGGFNPIKDIYKTEVFRLSSLRNRWKPDDALGPSGEVIPENIITRPPTAELRENQTDQD 484 Query: 482 SLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY ILD I++R+VE E+ + ++ +TV ++ LL +EYKRRQA G K+T Sbjct: 485 SLPPYDILDGILERLVEREQPLADIVAAGFDRDTVARIDRLLNVAEYKRRQAAPGVKVTR 544 Query: 541 KSFGRDRLYPISNKFRD 557 K+FGRDR YPI+N+FRD Sbjct: 545 KNFGRDRRYPITNRFRD 561 >gi|148270642|ref|YP_001245102.1| NAD synthetase [Thermotoga petrophila RKU-1] gi|147736186|gb|ABQ47526.1| NH(3)-dependent NAD(+) synthetase [Thermotoga petrophila RKU-1] Length = 576 Score = 631 bits (1627), Expect = e-178, Method: Composition-based stats. Identities = 221/584 (37%), Positives = 330/584 (56%), Gaps = 34/584 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K+L++ +AQLNP +GD GN+ KA A A +G DL++F ELF+ GYPPEDL+ + S Sbjct: 1 MKRLRVTLAQLNPTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGYPPEDLMLRLS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ + T + G +++GF D++ N+ ++ G I+ V KI+LPNY Sbjct: 61 FLRENRKYLQKFAQHTRNLGVTVLMGFIDSDEDA-YNAAAVVKGGEILGVYRKISLPNYG 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK-QGAEFLFSLNASPYY 180 F E+R F G + +I++G+ ICEDIW L +G + +L+ASPY+ Sbjct: 120 VFDERRYFKPGEELLVVKIGNIKVGVTICEDIWNPVEPSASLSLGEGVHLIANLSASPYH 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ + H+ + Y N VGGQDEL+FDG S D ++ K F E+ Sbjct: 180 VGKPVLRKDYLSMKAYDYHVAMAYCNMVGGQDELVFDGGSMVVDASGEVINYGKLFEEEI 239 Query: 241 FMTEWHYDQQLS------------------------QWNYMSDDSASTMYIPLQEEEADY 276 + D+ L S + EE + Sbjct: 240 ITVDLDLDENLRVSLVDPRRRYMKTQNYPVKTVEAGNLREKSGHFEPVVNPLPVREEEMF 299 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A + LRDYV+KN F KV+IGLSGG+DS+L A IA +ALGKENV+ +++P YTS +S+ Sbjct: 300 RALITGLRDYVRKNGFEKVVIGLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKESI 359 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 EDA AK LG + ++PI D+ + + + I EN+Q+RIRGN LMALSN Sbjct: 360 EDAQTLAKNLGIETFIIPITDVFHSYLGALEDVFAGREPDITEENLQARIRGNYLMALSN 419 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++LTT NKSE++ GY TLYGDM+GGF +KD+YKT V+++ W NS Sbjct: 420 KFGWLVLTTGNKSEMATGYATLYGDMAGGFAVIKDVYKTDVYRIGRWYNSWRG------- 472 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETV 515 E+IP +I K P+AELRP QTDQE LPPY +LD+I++ +E + ++ +TV Sbjct: 473 KEIIPENIFVKPPTAELRPGQTDQEKLPPYEVLDEILRLYIEEGLDPEEIASKGFDRKTV 532 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V ++ +EYKR+QA +G KI+ ++FG+D PI+N+F++ + Sbjct: 533 LDVTEMIRKNEYKRKQAAIGVKISTRAFGKDWRMPITNRFKEPL 576 >gi|290476027|ref|YP_003468924.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Xenorhabdus bovienii SS-2004] gi|289175357|emb|CBJ82160.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Xenorhabdus bovienii SS-2004] Length = 540 Score = 630 bits (1626), Expect = e-178, Method: Composition-based stats. Identities = 234/556 (42%), Positives = 335/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L I +AQLN +VGDI GN + + +E ++G DL++F+EL +SGY PEDL+F+ Sbjct: 1 MSRTLNIVLAQLNWLVGDIEGNSERMLQTVQEQQKKGADLVMFSELALSGYFPEDLLFRA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Q C + L+ + I+VG P Q N++ + G IIA K LPNY Sbjct: 61 DLHQRCREQLVRLQEASSQ--VAILVGHPWQQDGKTYNALSLFWKGEIIARYFKQLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + + F+ LG+LICED+W ++ LK+ G++ + SLNASPY Sbjct: 119 GVFDEDRYFKAGDQSCVVPFKGYNLGLLICEDLWFDA-PIDALKQAGSDIILSLNASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LPIIY+NQVGGQD+LIFDG S FD ++ +M F EQ Sbjct: 178 REKPNIRSTLIQSHCQRTQLPIIYLNQVGGQDQLIFDGCSKVFDANGKITHRMAAFEEQI 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++N M+ + + + L Y A VLS+RDYV KN F ++GLS Sbjct: 238 ---------EQCRFNEMNIEPMANLIPQLSPLAQIYKALVLSVRDYVHKNGFKGALLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGK++VQ +M+P++YTS S+ DA A+ LG ++DV+ I + + Sbjct: 289 GGIDSGLTLAIAVDALGKDHVQAVMMPFRYTSEMSIHDAREQAELLGVEFDVVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 349 AFMAQLEPMFAGTEKDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF L+ +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFNALKDVPKTMVFALSKYRNT---------VSPAIPQRVIDRPPSAELAPDQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ VE ++S + Q +++ VR V L+ +EYKRRQAP+G +IT Sbjct: 460 DSLPPYDMLDAILEGYVEKDKSVADLVAQGFDEAIVRKVIRLVDINEYKRRQAPIGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 + FG+DR YPI++ F Sbjct: 520 ERDFGKDRRYPITSGF 535 >gi|300724142|ref|YP_003713459.1| putative glutamine-dependent NAD(+) synthetase [Xenorhabdus nematophila ATCC 19061] gi|297630676|emb|CBJ91341.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Xenorhabdus nematophila ATCC 19061] Length = 540 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 232/556 (41%), Positives = 332/556 (59%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L I +AQLN +VGDI GN + + +E + DL++F+EL +SGY PEDL+F+ Sbjct: 1 MSRTLNIGLAQLNWLVGDIEGNCERMLQTVKEQQEKEADLVMFSELALSGYFPEDLLFRS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Q C + L+ + I+VG P Q + N++ + G ++A K LPNY Sbjct: 61 DLHQRCREQLIRLQEASSQ--VAILVGHPWQQDGKLYNALSLFWQGEVVARYFKQLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F +G + I F+ LG+LICED+W + LKK GAE + S+NASPY Sbjct: 119 GVFDEERYFKAGKQDCVIPFKGYNLGLLICEDLWFD-EPVNALKKAGAEIILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LPI+Y+NQVGGQD+LIFDG S FD + ++ +M F EQ Sbjct: 178 REKPNIRSALIKSHCQRTQLPIVYLNQVGGQDQLIFDGCSKVFDAKGEITHRMVAFEEQI 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + M+ + + L Y A VLS+RDYVQKN F ++GLS Sbjct: 238 EQCRFD---------GMNIEPMANPIPQLPSLGQIYKALVLSVRDYVQKNGFKGALLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGK++VQ +M+P++YTS S+ DA A+ LG ++DV+ I + + Sbjct: 289 GGIDSGLTLAIAVDALGKDHVQAVMMPFRYTSEMSIHDAREQAEMLGVEFDVVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 349 AFMTQLEPMFAGTEKDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF L+ +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFNALKDVPKTMVFALSEYRNT---------VSPAIPQRVIDRPPSAELAPDQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ VE ++S + + +++ VR V L+ +EYKRRQAP+G +IT Sbjct: 460 DSLPPYDMLDAILEGYVEKDKSVADLIAEGFDEVIVRKVIRLVDINEYKRRQAPIGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 + FG+DR YPI++ F Sbjct: 520 QRDFGKDRRYPITSGF 535 >gi|197285726|ref|YP_002151598.1| NAD synthetase [Proteus mirabilis HI4320] gi|194683213|emb|CAR43877.1| glutamine-dependent NAD(+) synthetase [Proteus mirabilis HI4320] Length = 538 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 236/559 (42%), Positives = 331/559 (59%), Gaps = 24/559 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KLK+A+AQLN VVGDI GN + + ++ DL+LF+EL + GY PEDL+F+ Sbjct: 1 MSRKLKLALAQLNWVVGDIEGNCERMLATVK--AQEDADLVLFSELALCGYSPEDLLFRP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + L+ + IVVG P + N++ G + A K LPNY Sbjct: 59 DFQQRCEEQLVRLEQASKK--TAIVVGHPWWQNGTIYNALSFFYQGELQARYFKQQLPNY 116 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + F+ LG+LICEDIW N LK+ GA+ + S+NASPY Sbjct: 117 GVFDEKRYFQQGNERCVVPFKGYHLGLLICEDIWIN-EPIDALKQAGADLVLSINASPYS 175 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R +++ HLP++Y+NQ+GGQDEL+FDG S FD + + ++ F EQ Sbjct: 176 REKPHIRTQLIKEHCQRTHLPVVYLNQIGGQDELVFDGCSKVFDERGTITHRLAAFDEQV 235 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E+ ++ L Y A VL+ RDYV KN F I+GLS Sbjct: 236 AVVEFD---------ELTIVPMQDAAPELSPLAQVYQALVLATRDYVTKNGFKGAILGLS 286 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGKE+VQ +M+P++YTS S+ DA A LG ++D + I + + Sbjct: 287 GGIDSGLTVAIAVDALGKESVQAVMMPFRYTSEMSIHDAKEQANLLGVEFDTVSIEPMFD 346 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 347 AFMDQLSPMFKGSAVDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 406 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ L+ IP ++++ PSAEL P QTDQ Sbjct: 407 DMAGGFDVLKDVPKTLVFELAKYRNT---------LSPAIPQRVIDRPPSAELAPGQTDQ 457 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 ++LPPY ILD +++ VE ++S + +++ VR V L+ +EYKRRQAPVG +IT Sbjct: 458 DNLPPYDILDALLEGYVEQDKSVSDLVAAGFDEAIVRKVVKLVDINEYKRRQAPVGPRIT 517 Query: 540 AKSFGRDRLYPISNKFRDH 558 +++FG+DR YPI++ F H Sbjct: 518 SRNFGKDRRYPITSGFGRH 536 >gi|225849058|ref|YP_002729222.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Sulfurihydrogenibium azorense Az-Fu1] gi|225644679|gb|ACN99729.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Sulfurihydrogenibium azorense Az-Fu1] Length = 574 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 232/585 (39%), Positives = 336/585 (57%), Gaps = 41/585 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++K+++A+ Q+NP+VGD N+ K ++A +D+I F EL ++GYPPEDL+ K S Sbjct: 1 MRKIRVALGQINPIVGDFDYNLQKILDYIKKAKDLQVDIIAFPELALTGYPPEDLILKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ I L + D ++VGF + ++ + N+ I+ NIIA K LPNY Sbjct: 61 FIEKNLQYIKKLTENVED--IVVIVGFIDKKED-IYNAAAIIHNKNIIATYHKQFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F G + G+ ICEDIW N +G E +F++NASPY Sbjct: 118 VFDENRYFQKGNGLTVFEIEGYKFGVSICEDIWYPENPINTYAVEGCEVIFNINASPYSE 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+KKR E++ + + I YVN VGGQDEL+FDG SF + ++ + + F E Sbjct: 178 GKVKKREELLKVRSRDNLVSIAYVNLVGGQDELVFDGNSFFVNPNGEILGKGESFKEDLV 237 Query: 242 MTEWHYDQQLS-----------QWNYMSDDSASTMYIPLQ-----------------EEE 273 + + D+ + Y D + + + Q + E Sbjct: 238 VADIDLDEIFRYQLKDNRLKNLRSEYRRSDKVNYIKVDYQIKEKTVNIEQKIVLDKPDIE 297 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 YN VL LRDY+ KN F KV+IGLSGG+DS+L A IAVDALG ENV+ +++P YTS Sbjct: 298 NTYNTLVLGLRDYITKNGFKKVVIGLSGGVDSSLVATIAVDALGNENVKGVLMPSPYTSK 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +S+EDA AK L + ++PI ++ + + + EN+Q+RIRGNILMA Sbjct: 358 ESIEDALELAKNLNIETFIIPITNIFQTYLDEFKEIFKGLKPDTTEENLQARIRGNILMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN ++L T NKSE+SVGY TLYGDM GGF +KD+ KT+V+QL +RNS Sbjct: 418 LSNKFGWIVLATGNKSEMSVGYSTLYGDMVGGFAVIKDVLKTKVYQLCEYRNS------- 470 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYND 512 +++VIP +L K PSAELRP+QTD+ L PY ILD+IIK VE + S +++ Sbjct: 471 --ISKVIPDRVLIKPPSAELRPNQTDEAELAPYHILDEIIKMYVEQDCSVEEIIKAGFDE 528 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +TV+ + L+ +EYKRRQ+P+G KIT ++FG+DR PI+N+F++ Sbjct: 529 KTVKKIVKLIDTNEYKRRQSPIGIKITERAFGKDRRMPITNRFKE 573 >gi|227356237|ref|ZP_03840626.1| glutamine-dependent NAD(+) synthetase [Proteus mirabilis ATCC 29906] gi|227163701|gb|EEI48617.1| glutamine-dependent NAD(+) synthetase [Proteus mirabilis ATCC 29906] Length = 538 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 236/559 (42%), Positives = 331/559 (59%), Gaps = 24/559 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KLK+A+AQLN VVGDI GN + + ++ DL+LF+EL + GY PEDL+F+ Sbjct: 1 MSRKLKLALAQLNWVVGDIEGNCERMLATVK--AQEDADLVLFSELALCGYSPEDLLFRP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + L+ + IVVG P + N++ G + A K LPNY Sbjct: 59 DFQQRCEEQLVRLEQASKK--TAIVVGHPWWQNGTIYNALSFFYQGELQARYFKQQLPNY 116 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + F+ LG+LICEDIW N LK+ GA+ + S+NASPY Sbjct: 117 GVFDEKRYFQQGNERCVVPFKGYHLGLLICEDIWIN-EPIDALKQAGADLVLSINASPYS 175 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R +++ HLP++Y+NQ+GGQDEL+FDG S FD + + ++ F EQ Sbjct: 176 REKPHIRTQLIKEHCQRTHLPVVYLNQIGGQDELVFDGCSKVFDERGTITHRLAAFDEQV 235 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E+ ++ L Y A VL+ RDYV KN F I+GLS Sbjct: 236 AVVEFD---------ELTIVPMQDAAPELSPLAQVYQALVLATRDYVTKNGFKGAILGLS 286 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGKE+VQ +M+P++YTS S+ DA A LG ++D + I + + Sbjct: 287 GGIDSGLTVAIAVDALGKESVQAVMMPFRYTSEMSIHDAKEQADLLGVEFDTVSIEPMFD 346 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 347 AFMDQLSPMFKGSAIDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 406 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ L+ IP ++++ PSAEL P QTDQ Sbjct: 407 DMAGGFDVLKDVPKTLVFELAKYRNT---------LSPAIPQRVIDRPPSAELAPGQTDQ 457 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 ++LPPY ILD +++ VE ++S + +++ VR V L+ +EYKRRQAPVG +IT Sbjct: 458 DNLPPYDILDALLEGYVEQDKSVSDLVAAGFDEAIVRKVVKLVDINEYKRRQAPVGPRIT 517 Query: 540 AKSFGRDRLYPISNKFRDH 558 +++FG+DR YPI++ F H Sbjct: 518 SRNFGKDRRYPITSGFGRH 536 >gi|298290916|ref|YP_003692855.1| NAD+ synthetase [Starkeya novella DSM 506] gi|296927427|gb|ADH88236.1| NAD+ synthetase [Starkeya novella DSM 506] Length = 557 Score = 628 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 271/552 (49%), Positives = 372/552 (67%), Gaps = 8/552 (1%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA AQLNPVVGDIAGN+ KAR AR +A QG +L+LFTELFI+GYP EDLV K +F AC Sbjct: 11 IAFAQLNPVVGDIAGNLIKAREARAQAAEQGAELVLFTELFIAGYPLEDLVLKPAFQAAC 70 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +A++ L DT DGG +++G P D + + N+V++LD G ++ R K++LPNY F EK Sbjct: 71 RAAVEELAKDTADGGPAVLIGSPWADGDKLYNAVLLLDGGKVVTARYKVDLPNYGVFDEK 130 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 R F G PI F+ +R+G+ +CEDIW + ++ + L + G+E L N SPY + Sbjct: 131 RVFAPGPMPGPIPFKGVRIGVPVCEDIW-SQDVIECLAETGSELLLIPNGSPYRRTVYDE 189 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWH 246 R + ++ LP+ YVNQVGGQDEL+FDGASF + + LA QM +F E+ +T W Sbjct: 190 RMNVAVARVVESGLPLAYVNQVGGQDELVFDGASFVLNADRSLAVQMPNFQERIRLTRWE 249 Query: 247 YDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + ++ A + + ++EADY ACV+ LRDYV+KN F V++GLSGG+DSA Sbjct: 250 R----WAEGWRCEEGARSPLL--LDDEADYAACVMGLRDYVEKNRFPGVVLGLSGGVDSA 303 Query: 307 LCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 L AA+AVDALG E V +MLPY+YTS +SL DAAA A+ALG +YD++PI + V ++ Sbjct: 304 LVAAMAVDALGAERVHCVMLPYRYTSNESLSDAAAVAEALGVRYDIVPIAESVEALEKVL 363 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + P + EN+QSR+RG +LM++SN +M++TT NKSE+S GY TLYGDM+GG+ Sbjct: 364 APMFDGRPRDVTEENLQSRVRGTLLMSISNKFGSMVVTTGNKSEMSTGYATLYGDMNGGY 423 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPY 486 NPLKDLYKTQVF+L RN LGP V+P +++ K P+AELR +Q DQ+SLPPY Sbjct: 424 NPLKDLYKTQVFRLCHLRNRWKPAYALGPSGAVMPENVIVKPPTAELRENQKDQDSLPPY 483 Query: 487 PILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR 545 +LD I+ R+VE E + + Y+ V VE +L +EYKRRQA G K+TA++FGR Sbjct: 484 DVLDAILLRLVEREMPVADIVAEGYDATLVARVERMLNIAEYKRRQAAPGVKVTARNFGR 543 Query: 546 DRLYPISNKFRD 557 DR YPI+N+FR+ Sbjct: 544 DRRYPITNRFRE 555 >gi|300023353|ref|YP_003755964.1| NAD+ synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299525174|gb|ADJ23643.1| NAD+ synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 575 Score = 628 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 272/559 (48%), Positives = 354/559 (63%), Gaps = 9/559 (1%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQLN VGD+AGN +A A +A D+I+F ELF++GYPPEDLV K +F Sbjct: 1 MRIALAQLNATVGDLAGNARRAAEAHAKAAALSADVIVFPELFLNGYPPEDLVLKPAFQD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + ++ L + + G I++G + V N+V +LD G I A+ K LPNY F Sbjct: 61 ATRAELERLATACAE-GPAILMGTIWRKDGKVYNAVALLDRGRIEAITAKAELPNYGVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F SG P+ R +R+G+ ICEDIW + L + GAE + S N SP+ +K Sbjct: 120 EKRVFASGPMPGPLNVRGVRIGVPICEDIWTP-EAVETLAETGAEIIISPNGSPFDWHKP 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R I +++ LP+ Y+NQVGGQDEL+FDGASF +G + LA Q+ + E +TE Sbjct: 179 DTRMNIAVARVTESGLPLAYLNQVGGQDELVFDGASFVLNGDRSLAVQLPAWREALVVTE 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 W + S W S + A A Y+ACVL LRDYV KN F V++GLSGGID Sbjct: 239 WQH--TPSGWRCQSGEVAKL----SDGSAAAYDACVLGLRDYVDKNAFPGVVLGLSGGID 292 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AAIAVDALG + V +MLP K+TS SL+DAA CAKALG +YD + I V Sbjct: 293 SALVAAIAVDALGPDRVHAVMLPSKFTSDDSLQDAAECAKALGIRYDKVSIEPAVAGLTW 352 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + S I EN+QSR+RG ILMA+SN AML+TT NKSE+SVGY TLYGDM+G Sbjct: 353 SLKDLFAGTNSDITEENLQSRVRGTILMAISNKFGAMLVTTGNKSEMSVGYATLYGDMNG 412 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GFNP+KDLYKT+V+ L+ WRN GP VIP IL K+P+AELR +QTDQ+SLP Sbjct: 413 GFNPIKDLYKTEVYALSRWRNEQRPDGAFGPQGIVIPERILTKAPTAELRANQTDQDSLP 472 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY LDDI+ +VE E + + ETV+ VE LLY +EYKRRQA G KI++++F Sbjct: 473 PYDALDDILVSLVEKEMPVAAVIARGHTLETVKKVERLLYLAEYKRRQAAPGVKISSRNF 532 Query: 544 GRDRLYPISNKFRDHISEE 562 GRDR YPI+N+FR+ + E Sbjct: 533 GRDRRYPITNRFREDVPSE 551 >gi|238759702|ref|ZP_04620862.1| NAD+ synthase [Yersinia aldovae ATCC 35236] gi|238702130|gb|EEP94687.1| NAD+ synthase [Yersinia aldovae ATCC 35236] Length = 540 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 232/556 (41%), Positives = 343/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P ++ + N++ + G ++ K LPNY Sbjct: 61 DFYQRCKTQLDRLQAATQH--TAVLVGHPWREAGKLYNALSLFAEGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + + RLG+LICED+W + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGDKSCVVELKGYRLGLLICEDLWFD-GPVDAVKAAGAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ N + L Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQF---------NGCEVVPMTAPVAELPPLAQVYEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMSQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD+I++ VE+++S + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDEILEGYVEHDKSVTDLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|123441385|ref|YP_001005372.1| NAD synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088346|emb|CAL11137.1| putative glutamine-dependent NAD [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 540 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 231/556 (41%), Positives = 341/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P +++ + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQQ--TAVLVGHPWREEGNLYNALSLFADGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHDTCVVELKGYRLGLLICEDLWFD-GPVDAVKAAGAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ N L Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQF---------NECEVVPMMAPAAELPPLAQVYEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVAEGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|83648563|ref|YP_436998.1| NAD synthase [Hahella chejuensis KCTC 2396] gi|83636606|gb|ABC32573.1| NAD synthase [Hahella chejuensis KCTC 2396] Length = 546 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 235/557 (42%), Positives = 340/557 (61%), Gaps = 20/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 + +LK+A AQ++ +VGDI GN+ K A E A + DL++F EL ++GYPPEDL+ + Sbjct: 5 MTQLKVAFAQIDCLVGDIPGNVDKVIEAAETAKTKYNADLVIFPELTLTGYPPEDLLLRA 64 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A++ + D +V+GFP ++Q + N +D G I A K LPNY Sbjct: 65 SLQVRVEKALERILYTVKD--IALVIGFPWREQGKLFNCAAFIDGGEIKAKYRKKCLPNY 122 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + +R LG+ ICED+W+ I A+F+ ++NASPY Sbjct: 123 QVFDEKRYFEPGSDTVVLPWRGFNLGVSICEDVWEEEPIAATAAAG-ADFIVNINASPYD 181 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL++R +V + +PI+YVN +GGQDELIFDG SF + ++ F F E Sbjct: 182 IAKLQQRRTLVQSRAVTNSVPILYVNMIGGQDELIFDGGSFAVNRHGRVCFSAPQFEEGI 241 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 F+ E + D + ++ + + E + Y A V +RDYV KN F V+IGLS Sbjct: 242 FLLELN-DVIHGEGQETAEPAPTMAV-----EASIYKALVTGVRDYVNKNRFKSVVIGLS 295 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A+AVDA+G + V+ +M+P++YTS SLEDA A AKALG +Y+V+PI + + Sbjct: 296 GGIDSAVTLAVAVDAIGADRVRAVMMPFRYTSQMSLEDAEAEAKALGVQYEVVPIEPIYD 355 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ ENIQ+RIRG ILM +SN + A++LTT NKSE++VGY TLYG Sbjct: 356 QFMGALNPLFAGLDRDTTEENIQARIRGVILMGISNKTGALVLTTGNKSEMAVGYATLYG 415 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG++ LKD++KT VF+LA +RN+ L+ VIP ++ + PSAEL P Q D+ Sbjct: 416 DMAGGYDVLKDVFKTMVFRLAWYRNT---------LSPVIPERVITRPPSAELAPDQKDE 466 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD+I+ VE++ S + ++ ETV V L+ +EYKRRQAP+G +IT Sbjct: 467 DSLPPYEILDEILSLYVEHDVSADGIVAKGFDKETVYRVVRLVDINEYKRRQAPIGARIT 526 Query: 540 AKSFGRDRLYPISNKFR 556 + FGRDR YPI++ ++ Sbjct: 527 MRGFGRDRRYPITSGWK 543 >gi|209885642|ref|YP_002289499.1| glutamine-dependent NAD(+) synthetase [Oligotropha carboxidovorans OM5] gi|209873838|gb|ACI93634.1| glutamine-dependent NAD(+) synthetase [Oligotropha carboxidovorans OM5] Length = 584 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 269/562 (47%), Positives = 366/562 (65%), Gaps = 13/562 (2%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 + +AQ+NP VGDI+GN AKA AR +A G L++ ELF+ GYPPED+V K +F C Sbjct: 9 VTLAQINPTVGDISGNAAKAWAARAKAAADGASLLVLPELFLCGYPPEDIVLKPAFQARC 68 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 + I+TL T DGG +++G P D+ + N+V +LD G + +R K NLPNY F EK Sbjct: 69 RAEIETLARATADGGPAVLIGTPWVDEGKLYNAVALLDGGRVAGLRFKANLPNYGVFDEK 128 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASPYYH 181 R F G + P+ R +R+G+ ICED W + N+ + L + GAE L N SPY Sbjct: 129 RIFARGPAAGPLTVRGVRIGVPICEDTWMEESAEYENVVECLAETGAEILIVPNGSPYAR 188 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 NK R + +I+ LP IY+NQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 189 NKNDIRLSMAVARITESGLPFIYLNQVGGQDELVFDGASFAINADRSLAAQLPCFQESIT 248 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 W D+ + L+ + ADY ACVL LRDYV KN F V++G+SG Sbjct: 249 TLTWLRDENGWTCK-------GPVSPMLEGDRADYAACVLGLRDYVGKNGFPGVLLGISG 301 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSALC AIAVDA+G E V+ +MLPY++T+ +S+EDAA A+A G +Y+VLPI V Sbjct: 302 GIDSALCLAIAVDAIGVERVRGVMLPYRFTAKESIEDAARIARAFGIRYEVLPIAAAVTG 361 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F ++ + +P + EN+Q+R RG +LMA+SN ML+TT NKSE+SVGY TLYGD Sbjct: 362 FEGILKDTFKGKPRDVTEENLQARTRGVLLMAISNKFGDMLVTTGNKSEMSVGYATLYGD 421 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGFNP+KD+YKT+VF+L+S RNS LGP +VIP SI+ + P+AELR +QTDQ+ Sbjct: 422 MNGGFNPIKDIYKTEVFRLSSLRNSWKPEGALGPSGKVIPVSIIARPPTAELRENQTDQD 481 Query: 482 SLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY ILD I++R+VE++ S ++ ++ +TV ++ LL +EYKRRQA G K+T Sbjct: 482 SLPPYDILDGILERLVEHDMSVAEIVEEGFDRDTVMRIDRLLNLAEYKRRQAAPGVKVTR 541 Query: 541 KSFGRDRLYPISNKFRDHISEE 562 +SFGRDR YPI+N+FRD+ E Sbjct: 542 RSFGRDRRYPITNRFRDNGESE 563 >gi|254294201|ref|YP_003060224.1| NAD+ synthetase [Hirschia baltica ATCC 49814] gi|254042732|gb|ACT59527.1| NAD+ synthetase [Hirschia baltica ATCC 49814] Length = 553 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 262/560 (46%), Positives = 341/560 (60%), Gaps = 11/560 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L I AQLN +VGD+ N+ KA A +EA+ G DL++ ELF+ GYPPEDLV K Sbjct: 1 MSDRLTILSAQLNAIVGDVDANLEKAVGALKEAHACGADLVVLPELFLCGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLP 118 + +AC A L S T G GIVVG P ++ NSV ++ G I A+R K LP Sbjct: 61 ALSKACLRAAHELASQTRQDGPGIVVGMPVWEEGQALPYNSVALIADGEIKALRHKYELP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F EKRTF G P+ FR LG+ ICEDIW + LK++GAE L S N SP Sbjct: 121 NYDVFDEKRTFQQGPKPLPVGFRGFTLGLPICEDIWL-EAVPDALKEKGAEILLSPNGSP 179 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + N R + + Q + + LP++YVNQVGGQDEL FDG SF D + ++ Q+ F E Sbjct: 180 WRRNVRDARLKAFS-QWADLRLPLVYVNQVGGQDELAFDGESFAIDSRGRIVQQLPDFEE 238 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 ++ W D S + E Y A ++ L DYV+K F V+IG Sbjct: 239 AYSVSVWERTPMGLMCVEGKKDELS------SDLEETYLATMMGLGDYVRKTGFPGVLIG 292 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSA+ AAIAVDALG ENV +M+P +YTS +SL DA CA+ALG KYD + I Sbjct: 293 LSGGIDSAMVAAIAVDALGPENVWCVMMPSRYTSRESLLDAQQCAEALGVKYDNIQISSA 352 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 VN + ++S+ ENIQSR+RG LMALSN M+ TT NKSE++VGY TL Sbjct: 353 VNAYDEMLSEAFTGTTPDTTEENIQSRVRGVTLMALSNKFGHMVTTTGNKSEMAVGYATL 412 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG+NPLKD+YKT+VF+LA WRN++ + GP VIP +I+ K PSAELR Q Sbjct: 413 YGDMCGGYNPLKDIYKTEVFELARWRNANVPKNAHGPYGIVIPENIISKPPSAELREDQK 472 Query: 479 DQESLPPYPILDDIIKRI-VENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D++SLPPY ILDDI+ + E + + ++ VR ++ L+ +EYKRRQAP G K Sbjct: 473 DEDSLPPYHILDDILYGLIEREESIEEIVSRGHFEDVVRRIDSLVRINEYKRRQAPPGVK 532 Query: 538 ITAKSFGRDRLYPISNKFRD 557 I K+FGR R YP+ N++RD Sbjct: 533 IGDKNFGRGRRYPLVNRYRD 552 >gi|154245324|ref|YP_001416282.1| NAD synthetase [Xanthobacter autotrophicus Py2] gi|154159409|gb|ABS66625.1| NAD+ synthetase [Xanthobacter autotrophicus Py2] Length = 569 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 276/553 (49%), Positives = 368/553 (66%), Gaps = 11/553 (1%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA+AQLNP VGD+AGN+ ARR A G DL++F ELFI+GYPPEDLV K +F QAC Sbjct: 25 IAVAQLNPTVGDVAGNLDLARRTSAGARDAGADLVVFPELFIAGYPPEDLVLKPAFQQAC 84 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +AI+TL ++T D G +++G P ++ + NSV++L+ G I AVR K++LPNY F EK Sbjct: 85 RAAIETLAAETAD-GPALLIGAPWVEEGKLYNSVLLLENGGISAVRHKVDLPNYGVFDEK 143 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 R F G PI F+ +RLG+ ICEDIW +++ + L + GAE L N SPY + + Sbjct: 144 RVFTPGPLPGPIPFKGVRLGVPICEDIWG-ADVVECLAETGAELLIVPNGSPYRQSVYAE 202 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW- 245 R + ++ HLP++YVNQVGGQDEL+FDGASF + + LA Q F E+ +++W Sbjct: 203 RENVAVARVVESHLPLLYVNQVGGQDELVFDGASFALNPDRFLALQFPGFMERVRISKWQ 262 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++ D +EADY ACVL LRDYV KN F V++GLSGGIDS Sbjct: 263 RFENGWKCLGANLADRIEG-------DEADYAACVLGLRDYVNKNRFPGVVLGLSGGIDS 315 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 A+CAA+AVDALG E V IMLPY+YTS +SL DAAA A+AL +YDVLPI V + Sbjct: 316 AICAAMAVDALGPERVHCIMLPYRYTSEESLADAAAVAQALFVRYDVLPIVAGVEGMEAA 375 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 ++ + + EN+QSR+RG +LM++SN AM++TT NKSE+S GY TLYGDM+GG Sbjct: 376 LAPLFEGTQRDVTEENLQSRVRGALLMSVSNKFGAMVVTTGNKSEMSTGYATLYGDMNGG 435 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 +NP+KDLYKTQV +L+ RN LGP VIP S+++K P+AELR +Q D++SLPP Sbjct: 436 YNPIKDLYKTQVTRLSRLRNRWKPADALGPDGVVIPDSLIDKPPTAELRENQKDEDSLPP 495 Query: 486 YPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 Y +LD I++R+VE E S +N TV VE LL +EYKRRQA G K+T ++FG Sbjct: 496 YAVLDAILERLVEREHSVAQIIADGFNAATVTRVERLLNIAEYKRRQAAPGVKVTGRNFG 555 Query: 545 RDRLYPISNKFRD 557 RDR YPI+N+FR+ Sbjct: 556 RDRRYPITNRFRE 568 >gi|56479437|ref|YP_161026.1| NAD synthetase [Aromatoleum aromaticum EbN1] gi|56315480|emb|CAI10125.1| Glutamine-dependent NAD+ synthetase [Aromatoleum aromaticum EbN1] Length = 538 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 237/559 (42%), Positives = 340/559 (60%), Gaps = 23/559 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L IA+AQLN VGD+ N + RA ++A G DL+L EL +SGYPPEDL+ + Sbjct: 1 MDKTLAIAVAQLNFTVGDLTANADRIIRALDQARAAGADLLLTPELALSGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F +ACS + + H G +V+G P + ++ N+ ++ G ++A K LPNY Sbjct: 61 DFYRACSREVARIA--LHTDGITLVLGHPEERRDWRYNAASVIRDGEVLATYHKHLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F G ++LG+ IC D+W+ S + ++ +GAE L LNASPY+ Sbjct: 119 EVFDEERYFDRGLDACVFELNGVKLGVNICADLWE-SGPAELVRAEGAELLLGLNASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NKL +R+E++ G+++ LP++Y N VGGQDEL+FDGASF D Q+ +Q F E+ Sbjct: 178 MNKLARRYEVLRGRVADTGLPVVYCNMVGGQDELVFDGASFALDADGQVRYQAASFEERL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + + Y A +RDY+ KN F IIGLS Sbjct: 238 DVLHFRGGRWEPGEIVPARPIEEEV----------YEALKTGVRDYLGKNGFPGAIIGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL IAVDALG E V+ +M+P YT+ SL+D+ A LG +YD +PI +N Sbjct: 288 GGIDSALTLCIAVDALGPERVRAVMMPSPYTAQMSLDDSRALVANLGVRYDEIPIEPAMN 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F L+++ + P+ EN+QSRIRG ILMALSN + A++LTT NKSE++ GY TLYG Sbjct: 348 TFADLLARQFEGLPADTTEENLQSRIRGMILMALSNKTGAIVLTTGNKSEMATGYATLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKDLYKT VF+L+ WRN+ ++ V+P +I+ + PSAEL+P QTDQ Sbjct: 408 DMAGGFAVLKDLYKTFVFRLSRWRNT---------VSPVMPENIITRPPSAELKPDQTDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD II+ +E +ES + + + VR +L +EYKRRQ+PVG ++T Sbjct: 459 DSLPPYDVLDAIIEAYMERDESPREIIARGFPEADVRRTVAMLKRNEYKRRQSPVGIRVT 518 Query: 540 AKSFGRDRLYPISNKFRDH 558 + FGRD YPI+++++D Sbjct: 519 RRGFGRDWRYPITSRYQDE 537 >gi|153947276|ref|YP_001400135.1| NAD synthetase [Yersinia pseudotuberculosis IP 31758] gi|170023507|ref|YP_001720012.1| NAD synthetase [Yersinia pseudotuberculosis YPIII] gi|152958771|gb|ABS46232.1| NAD+ synthetase family protein [Yersinia pseudotuberculosis IP 31758] gi|169750041|gb|ACA67559.1| NAD+ synthetase [Yersinia pseudotuberculosis YPIII] Length = 540 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 232/556 (41%), Positives = 344/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLNEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C ++ L++ T ++VG P ++ + + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEVQLERLQAATPH--IAVLVGHPWREGDKLYNALSLFAQGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHQSCVVELKGYRLGLLICEDLWLD-GPIDAVKAAGAEVVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQVGGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQVGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + N + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQLN------ECNVIPMTAPVAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG K+DV+ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGVKFDVMSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFADTGRDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLAEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVAELVADGFDEAIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A+SFG+DR YPI++ F Sbjct: 520 ARSFGKDRRYPITSGF 535 >gi|238795120|ref|ZP_04638711.1| NAD+ synthase [Yersinia intermedia ATCC 29909] gi|238725568|gb|EEQ17131.1| NAD+ synthase [Yersinia intermedia ATCC 29909] Length = 540 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 232/556 (41%), Positives = 345/556 (62%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G L++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLNEQQKAGASLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P +++ + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQQ--TAVLVGHPWREEGNLYNALSLFAEGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHESCVVELNGYRLGLLICEDLWFD-GPVDAAKAAGAEVILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ G LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAGHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 M + + + N + + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TMLQLN------ECNVVPMTAPAAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMSQLAPMFAGTGRDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDEAIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|209964282|ref|YP_002297197.1| NAD synthetase [Rhodospirillum centenum SW] gi|209957748|gb|ACI98384.1| glutamine-dependent NAD(+) synthase [Rhodospirillum centenum SW] Length = 559 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 259/556 (46%), Positives = 353/556 (63%), Gaps = 8/556 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L IA+AQ+NP VG + N+ + R AR EA +G DL++ +EL +SGYPPEDLV K Sbjct: 1 MTDSLTIALAQINPTVGALRANLDRIRTARAEAAARGADLVVLSELVVSGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ A++ L +DT DGG G+++G P ++ N+ ++LD G + AVR K +LPNY Sbjct: 61 FFLDTVQQAVEELAADTGDGGPGLLLGAPWREAGRTHNAALLLDGGRVAAVRFKHDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G P+ FR +RLGI+ICED+W ++ + L + GAE L N SP+ Sbjct: 121 GPFDEKRVFDPGPLPGPVSFRGVRLGIVICEDMWTP-DVAETLAETGAEILIVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K +R + +++ LP+ YVNQVGGQDEL+FDG SF + + LA Q+ F E Sbjct: 180 TDKADRRLSLAVARVTETGLPLAYVNQVGGQDELVFDGGSFVLNADRGLAAQLPSFEEHV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T W +++ M P + EA Y A VL LRDYV+KN F VI+GLS Sbjct: 240 AITHWTRGDGGWTC------TSTEMTAPAEGLEAIYRAMVLGLRDYVRKNRFPGVILGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+AVDALG + V +M+P YTS +SLEDAA CA+ LGC+ D + I + Sbjct: 294 GGIDSALSAAVAVDALGADRVHCVMMPSPYTSRESLEDAAECAELLGCRIDTISIEPAMK 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + I EN+QSR RG LMALSN M+L+T NKSE+SVGY TLYG Sbjct: 354 AFEHMLEPAFADREPDITEENLQSRARGVTLMALSNKFGGMVLSTGNKSEMSVGYATLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG++ LKD+YKT V++L+ WRN GP VIP I+ K+P+AEL+P QTDQ Sbjct: 414 DMCGGYSVLKDVYKTTVYRLSHWRNRTLPRQAHGPAGRVIPERIITKAPTAELKPDQTDQ 473 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 ++LPPY ILDDI++ +VE + + ++ ETV V +L +EYKRRQAP G K+T Sbjct: 474 DTLPPYEILDDILECLVEKDLGLAAIVARGHDRETVSRVWRMLDRAEYKRRQAPPGVKVT 533 Query: 540 AKSFGRDRLYPISNKF 555 ++SFG+DR YPI++ F Sbjct: 534 SRSFGKDRRYPITSGF 549 >gi|22125216|ref|NP_668639.1| NAD synthetase [Yersinia pestis KIM 10] gi|45442325|ref|NP_993864.1| NAD synthetase [Yersinia pestis biovar Microtus str. 91001] gi|51597189|ref|YP_071380.1| NAD synthetase [Yersinia pseudotuberculosis IP 32953] gi|108808346|ref|YP_652262.1| NAD synthetase [Yersinia pestis Antiqua] gi|108811388|ref|YP_647155.1| NAD synthetase [Yersinia pestis Nepal516] gi|145599529|ref|YP_001163605.1| NAD synthetase [Yersinia pestis Pestoides F] gi|149365369|ref|ZP_01887404.1| putative glutamine-dependent NAD [Yersinia pestis CA88-4125] gi|162418452|ref|YP_001607954.1| NAD synthetase [Yersinia pestis Angola] gi|165928256|ref|ZP_02224088.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939227|ref|ZP_02227777.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008048|ref|ZP_02228946.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212501|ref|ZP_02238536.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398909|ref|ZP_02304433.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421435|ref|ZP_02313188.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423380|ref|ZP_02315133.1| NAD+ synthetase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469238|ref|ZP_02333942.1| NAD+ synthetase family protein [Yersinia pestis FV-1] gi|186896284|ref|YP_001873396.1| NAD synthetase [Yersinia pseudotuberculosis PB1/+] gi|218929969|ref|YP_002347844.1| NAD synthetase [Yersinia pestis CO92] gi|229838496|ref|ZP_04458655.1| putative glutamine-dependent NAD [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895500|ref|ZP_04510671.1| putative glutamine-dependent NAD [Yersinia pestis Pestoides A] gi|229899066|ref|ZP_04514210.1| putative glutamine-dependent NAD [Yersinia pestis biovar Orientalis str. India 195] gi|229901639|ref|ZP_04516761.1| putative glutamine-dependent NAD [Yersinia pestis Nepal516] gi|270489830|ref|ZP_06206904.1| NAD+ synthetase [Yersinia pestis KIM D27] gi|294504529|ref|YP_003568591.1| NAD(+) synthase [Yersinia pestis Z176003] gi|21958083|gb|AAM84890.1|AE013734_5 putative NH3-dependent NAD(+) synthetase [Yersinia pestis KIM 10] gi|45437189|gb|AAS62741.1| putative glutamine-dependent NAD [Yersinia pestis biovar Microtus str. 91001] gi|51590471|emb|CAH22111.1| putative glutamine-dependent NAD [Yersinia pseudotuberculosis IP 32953] gi|108775036|gb|ABG17555.1| glutamine-dependent NAD [Yersinia pestis Nepal516] gi|108780259|gb|ABG14317.1| putative glutamine-dependent NAD [Yersinia pestis Antiqua] gi|115348580|emb|CAL21522.1| putative glutamine-dependent NAD [Yersinia pestis CO92] gi|145211225|gb|ABP40632.1| glutamine-dependent NAD [Yersinia pestis Pestoides F] gi|149291782|gb|EDM41856.1| putative glutamine-dependent NAD [Yersinia pestis CA88-4125] gi|162351267|gb|ABX85215.1| NAD+ synthetase family protein [Yersinia pestis Angola] gi|165912827|gb|EDR31454.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165919763|gb|EDR37096.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992430|gb|EDR44731.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206432|gb|EDR50912.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960924|gb|EDR56945.1| NAD+ synthetase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051413|gb|EDR62821.1| NAD+ synthetase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057550|gb|EDR67296.1| NAD+ synthetase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186699310|gb|ACC89939.1| NAD+ synthetase [Yersinia pseudotuberculosis PB1/+] gi|229681568|gb|EEO77662.1| putative glutamine-dependent NAD [Yersinia pestis Nepal516] gi|229688011|gb|EEO80083.1| putative glutamine-dependent NAD [Yersinia pestis biovar Orientalis str. India 195] gi|229694862|gb|EEO84909.1| putative glutamine-dependent NAD [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701306|gb|EEO89334.1| putative glutamine-dependent NAD [Yersinia pestis Pestoides A] gi|262362479|gb|ACY59200.1| NAD(+) synthase [Yersinia pestis D106004] gi|262366517|gb|ACY63074.1| NAD(+) synthase [Yersinia pestis D182038] gi|270338334|gb|EFA49111.1| NAD+ synthetase [Yersinia pestis KIM D27] gi|294354988|gb|ADE65329.1| NAD(+) synthase [Yersinia pestis Z176003] gi|320016055|gb|ADV99626.1| putative glutamine-dependent NAD [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 540 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 231/556 (41%), Positives = 344/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLNEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C ++ L++ T ++VG P ++ + + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEVQLERLQAATPH--IAVLVGHPWREGDKLYNALSLFAQGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHQSCVVELKGYRLGLLICEDLWLD-GPIDAVKAAGAEVVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + N + + PL + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQLN------ECNVIPMTAPVAELPPLAQV---YEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG K+DV+ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGVKFDVMSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFADTGRDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLAEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVAELVADGFDEAIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A+SFG+DR YPI++ F Sbjct: 520 ARSFGKDRRYPITSGF 535 >gi|46201454|ref|ZP_00055021.2| COG0171: NAD synthase [Magnetospirillum magnetotacticum MS-1] Length = 548 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 255/550 (46%), Positives = 347/550 (63%), Gaps = 10/550 (1%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA+AQ+NPVVGDI GN+ R AR EA G DL++F EL + GYPPEDLV K +F+ AC Sbjct: 4 IALAQINPVVGDIVGNMGLIRAARAEAKALGADLVVFGELTLCGYPPEDLVLKGAFLDAC 63 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +A++ L ++T D G ++VG P + ++ + N+ ++LD G I A R K +LPNY F E Sbjct: 64 EAAVNELAAETAD-GPALLVGAPWRVKDKLHNAALLLDHGRIAATRLKHHLPNYGVFDEV 122 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 R F G P+ FR +RLG+LICED+W +++ + L + GAE L N SP+ +K K Sbjct: 123 RVFQPGPLPGPVSFRGVRLGVLICEDMW-YADVAETLGESGAEILVVPNGSPFEMDKPTK 181 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWH 246 R + ++ LP++YVNQVGGQDEL+FDGASF G ++A + + Q +T W Sbjct: 182 RLDHARARVEETGLPLVYVNQVGGQDELVFDGASFVLGGDAKIAASIAPWQSQVVLTTWT 241 Query: 247 YDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + + P E Y A V LRDYV KN F V++GLSGGIDSA Sbjct: 242 RESDGWRCE-------GPKAPPASRLEGVYQALVTGLRDYVGKNRFPGVVLGLSGGIDSA 294 Query: 307 LCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 +CAAIA DALG + V +M+P YTS +SLEDAA CA+ LG + D + I + F S++ Sbjct: 295 ICAAIAADALGPDKVWCVMMPSPYTSEESLEDAALCAQMLGVRLDTVNIGPAMAAFGSML 354 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + + S I EN+QSR RG LM LSN M+L+T NKSE+S GY TLYGDM GG+ Sbjct: 355 APIFEGRDSDITEENLQSRSRGLTLMGLSNKFGPMVLSTGNKSEMSCGYATLYGDMCGGY 414 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPY 486 LKD+YKT VF L+SWRN H LGP+ V+P ++ K PSAEL+P Q DQ++LPPY Sbjct: 415 AVLKDVYKTTVFALSSWRNGHRPPGCLGPVGAVMPERVITKPPSAELKPDQKDQDTLPPY 474 Query: 487 PILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR 545 LD +++ ++E E+S + + + VR V +L +EYKRRQAP G KI+++SFG+ Sbjct: 475 DELDAMLEAMIEEEKSVSEIVAKGFEEAVVRRVWRMLDRAEYKRRQAPPGVKISSRSFGK 534 Query: 546 DRLYPISNKF 555 DR YPI+N F Sbjct: 535 DRRYPITNAF 544 >gi|154249452|ref|YP_001410277.1| NAD+ synthetase [Fervidobacterium nodosum Rt17-B1] gi|154153388|gb|ABS60620.1| NAD+ synthetase [Fervidobacterium nodosum Rt17-B1] Length = 583 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 229/592 (38%), Positives = 339/592 (57%), Gaps = 40/592 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + K+++A+AQ+N VGDI GN K +A +D+++F EL I+GYPPEDL+FK Sbjct: 1 MNKVRLALAQINATVGDIEGNKNKIIEYINKALENDVDIVIFPELSITGYPPEDLLFKSH 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ AI+ + +VVGF ++ + + N+ +++ G + A K LPNY Sbjct: 61 FVRKNKEAIEEIARHVPK-SLVVVVGFVDEEGD-IFNAAAVINDGKVQAKYRKNYLPNYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F G ++ D+R+GI ICEDIW + G A+ + +L+ASPYY Sbjct: 119 VFDEMRYFQKGTKALVVLLEDVRVGITICEDIWYPGGPARLESLLGDAQLIVNLSASPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K+ R +++ + + + YVN VGGQDELIFDGAS + + ++ + K F E Sbjct: 179 VEKIAWRERMLSVRANDNIATVAYVNCVGGQDELIFDGASLVVNEKGEIIGRAKQFEEDL 238 Query: 241 FMTEWHY---------DQQLSQWNYMSDDSASTMYIPLQEEEAD---------------- 275 + + D + Q + D+ + I E+ Sbjct: 239 LIVDVDLIDIDKTCVKDPRRRQDKQIMDEERKNLEIVKLPFESKPKRTKITNRVEKTLPK 298 Query: 276 ----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 YNA VL+ RDY++KN K +IGLSGG+DS L A IAVDALG ENV + +P ++ Sbjct: 299 VAEVYNALVLATRDYIRKNGMKKAVIGLSGGMDSTLVACIAVDALGAENVVGVSMPGPFS 358 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 S S EDA A+ LG K+ +PI + N F ++ ++ P I EN+Q+RIRG IL Sbjct: 359 SEHSKEDAKILAENLGIKFLTIPIMEAYNSFLNMFKPVFEDRPFDITEENLQARIRGVIL 418 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 MALSN ++LTT NKSEIS GY TLYGD +GG+ +KD+YKT V++LA + N Sbjct: 419 MALSNKFGWIVLTTGNKSEISTGYSTLYGDTAGGYAVIKDVYKTFVYELAEYVNQKYGR- 477 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEY 510 E+IP + EK+PSAELR +QTDQ+ LPPY ILD+I+K VE + S + ++ + Sbjct: 478 ------EIIPRRVFEKAPSAELRENQTDQDKLPPYEILDEILKLYVEEDYSVSDIVERGF 531 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 ++ETV+ V ++ +EYKRRQ P G KIT ++FG+DR PI+N F++ + ++ Sbjct: 532 DEETVKKVAWMVDINEYKRRQMPPGPKITHRAFGKDRRLPITNAFKEWLEKK 583 >gi|270264765|ref|ZP_06193030.1| hypothetical protein SOD_i01820 [Serratia odorifera 4Rx13] gi|270041448|gb|EFA14547.1| hypothetical protein SOD_i01820 [Serratia odorifera 4Rx13] Length = 540 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 233/556 (41%), Positives = 342/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + +E + G DL++FTEL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNLLVGDIEGNTERMLQTVQEQQKAGADLVMFTELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + + L+ + D I+VG P ++ + + N++ + G ++A K LPNY Sbjct: 61 DFYQRCDAQLHRLQQASTD--VAILVGHPWREGDKLYNALSLFSEGQLLARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + RLG+LICED+W K GAE + S+NASPY Sbjct: 119 GVFDEKRYFHAGNETCVVNLKGYRLGLLICEDLW-FPEPVDAAKAAGAEMILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ G HLP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAGHCQRTHLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + N + + L + Y A VL++RDYV KN F ++GLS Sbjct: 238 TLLRF---------NELDVVPMTAPAAELPQLAQVYEALVLAVRDYVTKNGFKGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++D++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGVEFDIVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLTPMFAGTERDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVERDKSVADLVAEGFDEAIVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|85715402|ref|ZP_01046384.1| NAD(+) synthase [Nitrobacter sp. Nb-311A] gi|85697823|gb|EAQ35698.1| NAD(+) synthase [Nitrobacter sp. Nb-311A] Length = 583 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 275/564 (48%), Positives = 363/564 (64%), Gaps = 14/564 (2%) Query: 1 ML-KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M KI + QLNP VGDIAGN AKAR AR +A G L+ ELFI+GYPPEDLV + Sbjct: 1 MTETTFKITLGQLNPTVGDIAGNAAKARAARAQAKADGAALLALPELFIAGYPPEDLVLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +F AC AI+ L +T DGG +++G P D + N+ +LD G + A+R K+NLPN Sbjct: 61 PAFQAACREAIEDLARETSDGGPAMLIGTPWVDDGKLYNAYALLDEGRVAAIRFKVNLPN 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSL 174 Y F EKR F G P+ R +R+G+ ICED W + NI + L + GAE L Sbjct: 121 YGVFDEKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESAEYENIVECLAETGAEILIVP 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 N SPY K R I +++ LP++Y+NQVGGQDEL+FDGASF + LA Q Sbjct: 181 NGSPYAKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADCSLAAQFP 240 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E +W + + + ++ +EADY ACVL LRDYV+KN F Sbjct: 241 AFEESIVTLQWTRSAEGWRCT-------GPVAPQIEGDEADYAACVLGLRDYVRKNGFPC 293 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++G+SGGIDSALCAAIAVDALG E V+ +MLP ++T+ SL+DAA A ALG +Y+VLP Sbjct: 294 VLLGVSGGIDSALCAAIAVDALGAERVRGVMLPSRFTAQVSLDDAARLATALGIRYEVLP 353 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I V F ++S P EN+QSR RG +LMA+SN + AML+TT NKSE+SVG Sbjct: 354 IAPAVEGFEKILSATFAGLPRDTTEENLQSRARGTLLMAISNKTGAMLVTTGNKSEMSVG 413 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGFNP+KD++KT+VF+LAS RN+ GP EVIPPSI+ + P+AELR Sbjct: 414 YATLYGDMNGGFNPIKDIFKTEVFRLASLRNAWKPDGAFGPSGEVIPPSIIARPPTAELR 473 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAP 533 +Q DQ+SLPPY +LD I++R+VE EE + + ++ + + V+ LL +EYKRRQA Sbjct: 474 ENQLDQDSLPPYELLDAILERLVEREEPLASIVAEGFDRDVIVRVDRLLNAAEYKRRQAA 533 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 G K+T ++FGRDR YPI+N+FRD Sbjct: 534 PGVKVTRRNFGRDRRYPITNRFRD 557 >gi|157371885|ref|YP_001479874.1| NAD synthetase [Serratia proteamaculans 568] gi|157323649|gb|ABV42746.1| NAD+ synthetase [Serratia proteamaculans 568] Length = 540 Score = 623 bits (1608), Expect = e-176, Method: Composition-based stats. Identities = 232/556 (41%), Positives = 342/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + +E + G DL++FTEL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNLLVGDIEGNTERMLQTVQEQQKAGADLVMFTELALSGYPPEDLLYRN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + + L+ + + I+VG P ++ + + N++ + G ++A K LPNY Sbjct: 61 DFYQRCDAQLQRLQQASAE--VAILVGHPWREGDKLYNALSLFSEGQLLARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + +LG+LICED+W K GAE + S+NASPY Sbjct: 119 GVFDEKRYFQAGSETCVVELKGYQLGLLICEDLW-FPGPVDAAKAAGAEMILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ G HLP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAGHCQRTHLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLTAFAEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E N + + L + Y A VL++RDYV KN F ++GLS Sbjct: 238 TLLEL---------NELEVVPMTAPAAELPQLAQVYEALVLAVRDYVTKNGFKGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++D++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDIVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLTPMFAGTERDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVIDRPPSAELAPDQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVERDKSVADLVAEGFDEAIVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|253988810|ref|YP_003040166.1| NAD synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780260|emb|CAQ83421.1| nh(3)-dependent nad+ synthetase [Photorhabdus asymbiotica] Length = 540 Score = 623 bits (1608), Expect = e-176, Method: Composition-based stats. Identities = 236/556 (42%), Positives = 338/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN ++GDI GN + + +E +QG DL++F+EL +SGY PEDL+F+ Sbjct: 1 MSRTLNIALAQLNWMIGDIEGNCERMLQTVQEQQQQGADLVMFSELALSGYSPEDLLFRA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + L++ + I+VG P + + N++ + G I+ K LPNY Sbjct: 61 DFHQRCREQLARLQAASDQ--VAILVGHPWEQDGEIYNALSLFWQGEILTRYFKQRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + F+ LG+LICED+W + L++ GA+ + S+NASPY Sbjct: 119 GVFDEKRYFKAGDQSCVVPFKGYNLGLLICEDLWFD-EPIDALQQAGADLILSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R+E++ LP++Y+NQVGGQDELIFDG S F+ ++ ++ F+EQ Sbjct: 178 REKPYIRYELIREHCQRTDLPMVYLNQVGGQDELIFDGCSKVFNASGEITHRLAAFNEQI 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 Q +N + + L + Y A VLS+RDYV+KN F V++GLS Sbjct: 238 ---------QQCCFNELKIEPMVNPAPELPPLQQVYQALVLSVRDYVRKNGFQGVLLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGKE VQ +M+P++YTS S+EDA A LG +++V+ I + + Sbjct: 289 GGIDSGLTLAIAVDALGKEYVQAVMMPFRYTSEMSIEDAKEQADMLGVEFNVVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 349 AFMVQFEPMFVGTVKDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFNALKDVPKTLVFELAKYRNT---------VSPAIPQRVIDRPPSAELAPGQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S +++E VR V L+ +EYKRRQAPVG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVDELMAAGFDEEVVRKVIRLVDINEYKRRQAPVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 520 PRNFGKDRRYPITSGF 535 >gi|320539255|ref|ZP_08038925.1| putative NAD+ synthetase [Serratia symbiotica str. Tucson] gi|320030647|gb|EFW12656.1| putative NAD+ synthetase [Serratia symbiotica str. Tucson] Length = 540 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 237/556 (42%), Positives = 344/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + +E G DLI+FTEL + GYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNLLVGDIEGNTERMLQIAQEQQEAGADLIMFTELALCGYPPEDLLYRN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C++ + L+ D I+VG P ++ + + N++ + G ++ K LPNY Sbjct: 61 DFYQRCAAQLQRLQQAASD--VAILVGHPWREGDKLYNALSLFAEGRLLTRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + RLG+LICED+W K GAE + S+NASPY+ Sbjct: 119 GVFDEKRYFHAGSETCVVELKGYRLGLLICEDLW-FPEPMDAAKAAGAELILSINASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 + K R+ ++ G HLP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 YEKPYIRNTLMVGHCQRTHLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFTEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E+ N + S L + Y A VL++RDYV KN F+ ++GLS Sbjct: 238 AQLEF---------NELDVVPMSAPATQLPQLAQVYAALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK++VQ +M+P++YT+ S+ DA A+ LG ++D++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDSVQALMMPFRYTADISIADAKEEAEILGVEFDIVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG ILMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFIGQLSPMFAGTERDTTEENLQARCRGVILMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN ++ VIP ++E+ PSAEL P Q+DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNG---------VSYVIPQRVIERPPSAELAPDQSDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEGDKSVADLVAEGFDEAIVRQVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|256822303|ref|YP_003146266.1| NAD+ synthetase [Kangiella koreensis DSM 16069] gi|256795842|gb|ACV26498.1| NAD+ synthetase [Kangiella koreensis DSM 16069] Length = 539 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 224/558 (40%), Positives = 333/558 (59%), Gaps = 20/558 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQ N VGDI N+ + + ++A D+++F+EL + GYPPEDL+ + Sbjct: 1 MRIAIAQNNYTVGDIQRNLELIKSSVKQAELDNADIVVFSELSLCGYPPEDLLLRPDLYT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++ L + D +V+G P ++ EG+ N ++ G ++ K LPNYS F Sbjct: 61 IIDNAVEDLLAL--DSQVAMVIGHPIKEAEGLFNVATVIHRGQLLVQYKKQLLPNYSVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F SG + F+ ++LG+L+CED+W + GA+ L S NASPY + K Sbjct: 119 EKRYFESGSEDCVFEFKGLKLGLLVCEDLWYPEPTARVKAL-GADILLSPNASPYCYGKG 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R + + LPI+YVNQ+GGQDELIFDG S ++ + Q FQM +E + Sbjct: 178 TLRSAEMGSRARENELPIVYVNQIGGQDELIFDGCSAVYNEEGQRIFQMAEMAEDFAYID 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + + EE + A VL +RDY KN F ++GLSGGID Sbjct: 238 FD-------PKTGAIKPSKPYLNQFHGEEEIWQALVLGVRDYAHKNGFKGALLGLSGGID 290 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+ A+AVDALGKENV +M+P++YT+ S+EDA AKALG ++DV+ I + F S Sbjct: 291 SAVTLAVAVDALGKENVNAVMMPFRYTASMSIEDAEEEAKALGIEFDVISIEPMYEAFMS 350 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S ++ + + +NIQ+R RG +LMALSN ++LTT NKSE++VGY TLYGDM+G Sbjct: 351 QLSHQFKDTEADLTEQNIQARCRGTLLMALSNKFGRLVLTTGNKSEVAVGYCTLYGDMAG 410 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 G + LKD+ KT V++LA +RN+ +++VIP ++ + PSAEL P Q D+++LP Sbjct: 411 GLDVLKDVSKTMVYRLARYRNT---------VSQVIPERVITRPPSAELAPDQKDEDNLP 461 Query: 485 PYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY ILD I++ VE ++S + +++E VR V L+ +E+KRRQAP G +IT ++F Sbjct: 462 PYDILDAILEAYVEQDKSLDDIIALGHDEEVVRRVIRLVDINEHKRRQAPPGIRITQRAF 521 Query: 544 GRDRLYPISNKFRDHISE 561 GRDR YPI++ F Sbjct: 522 GRDRRYPITSGFGRQFKS 539 >gi|238796754|ref|ZP_04640260.1| NAD+ synthase [Yersinia mollaretii ATCC 43969] gi|238719485|gb|EEQ11295.1| NAD+ synthase [Yersinia mollaretii ATCC 43969] Length = 540 Score = 623 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 233/556 (41%), Positives = 339/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLNEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P ++ + N++ + G ++A K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQH--IAVLVGHPWREAGHLYNALSLFSEGKLLARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + +D RLG+LICED+W + K GAE L S+NASPY Sbjct: 119 GVFDEKRYFSAGHESCVVALKDYRLGLLICEDLWFD-GPVDAAKAAGAEVLLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD L ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKAFDAAGNLTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + N L Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQL---------NECEVVPMMAPAAELPPLAQVYEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFANTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|226943322|ref|YP_002798395.1| glutamine-dependent NAD+ synthase [Azotobacter vinelandii DJ] gi|226718249|gb|ACO77420.1| glutamine-dependent NAD+ synthase [Azotobacter vinelandii DJ] Length = 556 Score = 623 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 229/558 (41%), Positives = 332/558 (59%), Gaps = 19/558 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANR-QGMDLILFTELFISGYPPEDLVFK 59 M + L++ +AQLN VGD+ GN+ + A A +G D+I+F EL + GYPPEDL+ + Sbjct: 13 MSQTLRVVMAQLNLRVGDVHGNVERIIEAACSARDDRGADVIVFPELALCGYPPEDLLLR 72 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S + LK + G +V+G+P + N+ ++ G ++A K +LPN Sbjct: 73 SSMQLRIEQGLQRLKDEVR--GIYLVIGYPWLEDGRRFNAAAVIADGELLASYYKQHLPN 130 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F E+R F G + + I + + ICEDIW + ++ GA + SLNASP+ Sbjct: 131 YRVFDERRYFEPGSEACLLDIKGIPVALSICEDIW-FPGPMRQAREAGARLMLSLNASPF 189 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + +K ++R EI+ + S +P+IYVNQVGGQDEL+FDG S Q+ + F E Sbjct: 190 HLDKQREREEILVARTSEGGMPVIYVNQVGGQDELVFDGGSCVVAADGQVVQRAPAFVEG 249 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + + + ++ +P E + Y A VL +RDYV KN F V++GL Sbjct: 250 LYPVDLGIGDDGAATPRATN----CAPLPELE-ASVYQALVLGVRDYVCKNGFKGVVLGL 304 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL A+AVDALG E V+ +M+PY YT+ SLEDA A A+ALG Y VLPI +V Sbjct: 305 SGGIDSALTLAVAVDALGAERVEAVMMPYHYTAQMSLEDAEAEARALGVTYRVLPIAPMV 364 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F ++ + EN+Q+R RG +LMA+SN ++LTT NKSE++VGY TLY Sbjct: 365 EAFMGTLAPVFEGLGRDTTEENLQARCRGTLLMAISNKKGYLVLTTGNKSEMAVGYATLY 424 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF+ LKD+ KT VF+L +RN L VIP ++++ PSAEL P Q D Sbjct: 425 GDMAGGFDVLKDVPKTLVFRLCDYRNR---------LGAVIPQRVVDRPPSAELAPGQKD 475 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLPPYP+LD+I+K +E + S + ++++TVR V L+ +EYKRRQA VG ++ Sbjct: 476 EDSLPPYPVLDEILKLYIEYDLSANAIVAEGFDEDTVRRVLRLVDLNEYKRRQAAVGVRV 535 Query: 539 TAKSFGRDRLYPISNKFR 556 T + FGRDR YPI++ +R Sbjct: 536 TQRGFGRDRRYPITSGWR 553 >gi|332162672|ref|YP_004299249.1| NAD synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606778|emb|CBY28276.1| nad synthetase; Glutamine amidotransferase chain of NAD synthetase [Yersinia enterocolitica subsp. palearctica Y11] gi|325666902|gb|ADZ43546.1| NAD synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 540 Score = 623 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 230/556 (41%), Positives = 340/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P +++ + N++ + G ++ K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQQ--TAVLVGHPWREEGNLYNALSLFADGKLLGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + +K AE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHDTCVVELKGYRLGLLICEDLWFD-GPVDAVKAARAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ N L Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQF---------NECEVVPMMAPAAELPPLAQVYEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVAEGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|238762815|ref|ZP_04623784.1| NAD+ synthase [Yersinia kristensenii ATCC 33638] gi|238699120|gb|EEP91868.1| NAD+ synthase [Yersinia kristensenii ATCC 33638] Length = 540 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 230/556 (41%), Positives = 340/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + ++ L++ T ++VG P ++Q + N++ + G + K LPNY Sbjct: 61 DFYQRCEAQLNRLQAATQQ--TAVLVGHPWREQGELYNALSLFADGKLQGRYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHQSCVVELKGYRLGLLICEDLWFD-GPVDAVKAAGAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ N + L Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQF---------NECDVVPMTAPAAELPPLAQVYEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGSKRDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|253998620|ref|YP_003050683.1| NAD+ synthetase [Methylovorus sp. SIP3-4] gi|253985299|gb|ACT50156.1| NAD+ synthetase [Methylovorus sp. SIP3-4] Length = 550 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 230/554 (41%), Positives = 327/554 (59%), Gaps = 17/554 (3%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 ++++AIAQ+N VVGD+AGN A+ EA G +L+L EL +SGY P+DL+ ++ F Sbjct: 9 SQMQVAIAQINCVVGDLAGNAARILSYAHEAKAAGANLMLTPELALSGYSPQDLLLREDF 68 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 C + L +VVG P ++ N+ +L G I+ K LPN+S Sbjct: 69 THHCQRELQALAKALP-ADITVVVGHPHREHGRCYNAASVLQGGRIVLTYHKHALPNHSV 127 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E R F G + +R GILIC D+W+ K K+ GAE L LNASP++ Sbjct: 128 FDEVRYFSPGNKAGVFEHQGVRCGILICADVWEP-GPAKVSKQAGAELLLVLNASPFHLE 186 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K ++R++++ ++ LP++Y N VGGQDEL+FDG S D Q+ F+EQ + Sbjct: 187 KQQQRYKVLGKRVEETGLPLVYANLVGGQDELVFDGNSVVIDRCGAPVQQLPAFTEQLAL 246 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 Q +D + L EE+ Y A L LRDYVQKN F ++GLSGG Sbjct: 247 VSIDLSPQNRANPLPADIAPG-----LTREESAYQALTLCLRDYVQKNGFPGAVLGLSGG 301 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL AIAVDALG + V +M+P ++T+ S++DA A+ LG KY LPI L + F Sbjct: 302 IDSALTLAIAVDALGADKVHAVMMPSEFTADMSVDDARQMAQLLGVKYTELPIKPLFDQF 361 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + +++ I EN+Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM Sbjct: 362 CATLAEPFAGTSFDITEENLQARIRGMLLMALSNKFGSIVLTTGNKSEMAVGYSTLYGDM 421 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF LKD+ KT V++LA +RNS L++VIP I+ + PSAELR QTDQ+S Sbjct: 422 AGGFAVLKDISKTLVYRLARYRNS---------LSQVIPERIIIRPPSAELRHGQTDQDS 472 Query: 483 LPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD I++ VE + S Y ++ V V +L+ +EYKRRQ+P+G ++T + Sbjct: 473 LPPYDVLDAIMEAYVERDSSRQEIIAMGYREQDVARVLNLIDRNEYKRRQSPIGVRVTER 532 Query: 542 SFGRDRLYPISNKF 555 FG DR YP+ ++F Sbjct: 533 GFGLDRRYPVVSRF 546 >gi|192290590|ref|YP_001991195.1| NAD synthetase [Rhodopseudomonas palustris TIE-1] gi|192284339|gb|ACF00720.1| NAD+ synthetase [Rhodopseudomonas palustris TIE-1] Length = 587 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 275/561 (49%), Positives = 371/561 (66%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L I++AQLNP VGDIAGN KAR AR +A G DLI++ ELFI+GYPPEDLV K +F Sbjct: 7 RLTISLAQLNPTVGDIAGNADKARAARRQAAADGADLIVYPELFIAGYPPEDLVLKPAFQ 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +AI+ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 67 AACRAAIEDLARETADGGPAMLIGSPWVDNGKLYNACALLDGGRIAAIRHKVNLPNYGVF 126 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASP 178 EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L N SP Sbjct: 127 DEKRVFARGPVSGPVTIRGVRIGVPICEDTWLEESEDYENVVECLAETGAELLVVPNGSP 186 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++YVNQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 187 YARGKNDMRMSVSVARVTESDLPLVYVNQVGGQDELVFDGASFVLNADRTLAAQLPGFVE 246 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + + + + ++ +EADY ACVL LRDYV+KN F V++G Sbjct: 247 SVTTLSFVKGAAGWRCD-------GPVAPVIEGDEADYAACVLGLRDYVRKNGFPGVLLG 299 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG + V+ +MLP++YT+ SL+DA A ALG Y+VLPI Sbjct: 300 ISGGIDSALCAAIAVDALGADKVRGVMLPFRYTAQISLDDAGRLASALGFGYEVLPIAQA 359 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F +++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 360 VEGFEAILAKPFAGLERDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 419 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKTQVF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 420 YGDMNGGFNPIKDIYKTQVFRLSSLRNRWKPDDALGPDGEVIPESIIIRPPTAELRENQT 479 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE E+ + + ++ +TV ++ LL +EYKRRQA G K Sbjct: 480 DQDSLPPYDVLDAILERLVEREQPLASIVAEGFDKDTVVRIDRLLNIAEYKRRQAAPGVK 539 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 540 VTRKNFGRDRRYPITNRFRDK 560 >gi|238784206|ref|ZP_04628219.1| NAD+ synthase [Yersinia bercovieri ATCC 43970] gi|238714915|gb|EEQ06914.1| NAD+ synthase [Yersinia bercovieri ATCC 43970] Length = 540 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 230/556 (41%), Positives = 338/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L +A+AQLN +VGDI GN + + E + G L++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSVALAQLNWLVGDIEGNTERMLQTLNEQQKAGASLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ T ++VG P ++ + N++ + G ++A K LPNY Sbjct: 61 DFYQRCEAQLDRLQAATQH--IAVLVGHPWREAGNLYNALSLFSEGKLLARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + K GAE L S+NASPY Sbjct: 119 GVFDEKRYFSAGHDSCVVELKGYRLGLLICEDLWFD-GPVDAAKAAGAEVLLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD L ++ F+EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNLTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + N L Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQL---------NECEVVPMMAPAAELPPLAQVYEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+++RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSAYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|237745825|ref|ZP_04576305.1| NAD+ synthase [Oxalobacter formigenes HOxBLS] gi|229377176|gb|EEO27267.1| NAD+ synthase [Oxalobacter formigenes HOxBLS] Length = 537 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 231/554 (41%), Positives = 323/554 (58%), Gaps = 22/554 (3%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K+AIAQ+N VGD++GN A+ + EA +G D++L EL ++GYPPEDL+ + SF A Sbjct: 4 KVAIAQINSTVGDLSGNRARIAQFAREAAAKGADIVLTPELSLTGYPPEDLLLQHSFHSA 63 Query: 66 CSSAIDTLKSDTHDGG-AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D LK++ D ++VG N+ IL G+II K LPNY+ F Sbjct: 64 TRLELDRLKNELADLDNVHVLVGHHCIRDGLCYNACSILANGSIIGTYFKQELPNYTVFD 123 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + + G+ ICEDIW + + GA+ L +N+SPY+ K+ Sbjct: 124 EKRYFTPGTEPLVFHVKGVSFGVTICEDIW-FPEPAERTRAAGADVLLIMNSSPYHMGKM 182 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +R IV + H L +YVN VGGQDELIFDG SF + ++ Q+K E + Sbjct: 183 HQRPVIVRQNVIHHGLAALYVNLVGGQDELIFDGCSFAMNRDGKVCVQLKQCEEDMEIVS 242 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + M E+ Y A VL +RDYV KN F VIIGLSGG+D Sbjct: 243 FE----------NGNPVNGRMEEHPTVEKEVYRALVLGVRDYVNKNGFPGVIIGLSGGVD 292 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG E V+TIM+P YTS S DA+ A + YD +PI D + F Sbjct: 293 SALVLAIAVDALGPEKVRTIMMPSPYTSEISRIDASDMAARMKVSYDEIPITDCFSSFLQ 352 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ P EN+Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM+G Sbjct: 353 TLAPQFANLPEDSTEENLQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAG 412 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF +KD+YKT V++L +RN+ +++VIP +L ++P+AEL+P+Q DQ++LP Sbjct: 413 GFAVIKDIYKTLVYRLCRYRNT---------ISDVIPERMLTRAPTAELKPNQFDQDTLP 463 Query: 485 PYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD I+K +E +S + Y+ V + L+ +EYKRRQAP+G +IT + F Sbjct: 464 PYEVLDAIVKMFMEENKSVNEIVRNGYSHIVVERIVRLMRINEYKRRQAPIGIRITPRGF 523 Query: 544 GRDRLYPISNKFRD 557 GRD PI++KFRD Sbjct: 524 GRDWRCPITSKFRD 537 >gi|308048511|ref|YP_003912077.1| NAD+ synthetase [Ferrimonas balearica DSM 9799] gi|307630701|gb|ADN75003.1| NAD+ synthetase [Ferrimonas balearica DSM 9799] Length = 539 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 238/559 (42%), Positives = 332/559 (59%), Gaps = 23/559 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K+L +A+AQLN VG I N K +A +QG DL+LF EL ++GYPPEDL+ + Sbjct: 1 MSKQLVVALAQLNLTVGAIEDNAQKCLEWAAKAEQQGADLVLFPELALTGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 A+ L++ + G I+VG P +EG+ N ++ G I+ DK LPNY Sbjct: 61 DCQARVDEALAQLQAYS--GDIAILVGHPAMTEEGLRNRASLIHQGAILGHVDKQRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F + I F+ +LG+LICEDIW + K + QGA+ L +LNASP+ Sbjct: 119 RVFDEERYFEPADHSAVIPFKGHQLGVLICEDIW-HPEPVKQVTDQGADLLLTLNASPFD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +KL +R +++ + L ++Y+NQV GQDELIFDG S D + ++ F E Sbjct: 178 MSKLTERLDVLEACTAESGLAVVYLNQVCGQDELIFDGHSLVMDATGHICHELPQFEESL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + Q D +P Q+ YNA VL++RDYV KN F ++GLS Sbjct: 238 QLVRFTDGQ---------PDQGERHPLPSQD-AQVYNALVLAVRDYVGKNGFKGAVLGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DALG + VQ +M+P+KYTS S+EDA A A+ALG YDV+ I + + Sbjct: 288 GGIDSALTLAIAADALGADKVQAVMMPFKYTSSMSVEDARAQAEALGVTYDVVSIEPMFD 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ + EN+Q+R RG +LMALSN S +LLTT NKSE++VGY TLYG Sbjct: 348 AFMGQLAPMFEGTQKDTTEENLQARARGVLLMALSNKSGKILLTTGNKSEMAVGYCTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF +KDL K V++L+ +RN+ L+EVIP ++ + PSAEL P Q DQ Sbjct: 408 DMCGGFAVIKDLPKLLVYRLSRYRNT---------LSEVIPERVITRPPSAELAPDQVDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LDDI++R VE ++S + + VR V L +EYKRRQA VG ++T Sbjct: 459 DSLPPYDVLDDILERYVERDQSLEEIVAAGHREADVRRVIRLTDINEYKRRQAAVGPRVT 518 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++FG+DR YPI++ F Sbjct: 519 PRAFGKDRRYPITSGFGKR 537 >gi|37527188|ref|NP_930532.1| NAD synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786622|emb|CAE15684.1| NH(3)-dependent NAD+ synthetase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 540 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 238/556 (42%), Positives = 338/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN ++GDI GN + + +E +Q DL++F+EL ISGY PEDL+F+ Sbjct: 1 MSRTLNIALAQLNWMIGDIEGNCERMLQTVQEQQQQNADLVMFSELAISGYSPEDLLFRA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + L++ + I+VG P + + N++ + G I+A K LPNY Sbjct: 61 DFHQRCREQLARLQAASCQ--IAILVGHPWEQDGEIYNALSLFWQGEILARYFKQRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + F+ LG+LICED+W + LK+ GA+ + S+NASPY Sbjct: 119 GVFDEKRYFKAGDQSCVVPFKGYNLGLLICEDLWFD-EPIDALKQAGADLVLSINASPYS 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R+E++ LP+IY+NQVGGQDELIFDG S F+ ++ ++ F+EQ Sbjct: 178 REKPYIRYELIREHCRRTELPMIYLNQVGGQDELIFDGCSKVFNASGEVTHRLAAFNEQI 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 Q +N + + L + Y A VLS+ DYV+KN F V++GLS Sbjct: 238 ---------QQCCFNELKIEPMVNPAPELPPLQQVYQALVLSVHDYVRKNGFQGVLLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDALGKE+VQ +M+P++YTS S+EDA A LG +++V+ I + + Sbjct: 289 GGIDSGLTLAIAVDALGKEHVQAVMMPFRYTSEMSIEDAKKQADMLGVEFNVVSIEPVFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + EN+Q+R R ILMA+SN ++LTTSNKSE +VGY TLYG Sbjct: 349 AFMAQFEPLFAGTAKDTTEENLQARCRAVILMAMSNKRHRLVLTTSNKSESAVGYSTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFNALKDVPKTLVFALAKYRNT---------VSPAIPQRVIDRPPSAELAPGQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILDDI++ VE ++S ++++ VR V L+ +EYKRRQAPVG +IT Sbjct: 460 DSLPPYDILDDILEGYVEQDKSVDGLVAAGFDEQIVRKVVRLVDINEYKRRQAPVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 520 LRNFGKDRRYPITSGF 535 >gi|238788204|ref|ZP_04631999.1| NAD+ synthase [Yersinia frederiksenii ATCC 33641] gi|238723791|gb|EEQ15436.1| NAD+ synthase [Yersinia frederiksenii ATCC 33641] Length = 540 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 231/556 (41%), Positives = 339/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ ++VG P +++ + N++ + G + A K LPNY Sbjct: 61 DFYQRCEAQLDRLQAAAQQ--TAVLVGHPWREEGNLYNALSLFADGKLQARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHDTCVVELKGYRLGLLICEDLWFD-GPIDAVKAAGAEVVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYVRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ N L Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TLLQF---------NECEVVPMMAPAAELPPLAQVYEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILQGYVEQDKSVADLVADGFDETIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|57234088|ref|YP_181837.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides ethenogenes 195] gi|57224536|gb|AAW39593.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides ethenogenes 195] Length = 566 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 228/572 (39%), Positives = 329/572 (57%), Gaps = 28/572 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A R +EA G D+I+F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIIRHIQEARSLGADVIVFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ ++D++ + G ++VG+ G+ NS I+ ++I KI LPNY Sbjct: 61 FVEGNLHSLDSVIKASE--GITVIVGYVDSH-NGLHNSAAIIHNASLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +R+G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFLPGNRCPVYTICGLRVGVNICEDIWFASGPSTAQSNKGAELIINISASPYHF 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSDRARENRVYIAYTNMVGGQDELVFDGASNVFDYTGNLVLRGKQFQEDLL 237 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMY-----------------IPLQEEEADYNACVLSLR 284 + + Q + ++ S +PL + Y A +L + Sbjct: 238 VLDLDIPALTRQGDMSTEIPDSIFVSASGLSEPKLPFENSDSVPLDADAEVYQALLLGTK 297 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F KV+IGLSGGIDS+L AAIA DALG +NV +++P +Y+S S+ D+ A+ Sbjct: 298 DYINKNGFKKVVIGLSGGIDSSLVAAIATDALGADNVVGVIMPSRYSSAGSISDSLRLAE 357 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG K +PI + F S +S+ + ENIQ+RIRGN+LMALSN ++L Sbjct: 358 NLGIKTLQIPIDPIFKSFLSTLSEVFAGTETDTTEENIQARIRGNLLMALSNKFHWLVLN 417 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNKSE ++GY TLYGDM+GGF +KD+ K V++LA RN E+IP ++ Sbjct: 418 TSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLAHNRNKSAGF-------ELIPHNV 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLY 523 L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S + + V+ V ++ Sbjct: 471 LTKPPSAELKPNQLDTDSLPPYELLDPILEAYVEQDKSIDQIVALGFEESIVKRVVKMVD 530 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 531 RSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|86750492|ref|YP_486988.1| NAD synthetase [Rhodopseudomonas palustris HaA2] gi|86573520|gb|ABD08077.1| NH(3)-dependent NAD(+) synthetase [Rhodopseudomonas palustris HaA2] Length = 585 Score = 621 bits (1602), Expect = e-175, Method: Composition-based stats. Identities = 271/561 (48%), Positives = 366/561 (65%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + I++AQLNP VGDI GN A AR AR +A + D+I+F ELFISGYPPEDLV K +F Sbjct: 7 RFTISLAQLNPTVGDITGNAAMARAARAQAAAENADVIVFPELFISGYPPEDLVLKPAFQ 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +A++ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 67 AACRAAVEELARETADGGPAMLIGSPWVDGGKLYNACALLDGGRIAAIRFKVNLPNYGVF 126 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASP 178 EKR F G P+ R +R+G+ ICED W N+ + L + GAE L N SP Sbjct: 127 DEKRVFARGPVAGPVTIRGVRVGVPICEDTWLEESEDYENVVECLAETGAEILIVPNGSP 186 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ F+E Sbjct: 187 YARGKGDLRLSVQVARVTESDLPLVYLNQVGGQDELVFDGASFALNADRSLAAQLPAFAE 246 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 W + + +P +E Y ACVL LRDYV+KN F V++G Sbjct: 247 CITTLVWQKSADGWRCD------GPVAAVPDGDEGD-YAACVLGLRDYVRKNGFPGVLLG 299 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG V+ +MLP++YT+ SL+DA+ A ALG Y+VLPI Sbjct: 300 ISGGIDSALCAAIAVDALGAGRVRGVMLPFRYTAQISLDDASRLANALGFGYEVLPIAQA 359 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F +++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 360 VEGFEAILAKPFAGLARDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 419 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKTQVF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 420 YGDMNGGFNPIKDIYKTQVFRLSSLRNRWKPDGALGPDGEVIPESIIVRPPTAELRENQT 479 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE E+ + + ++ +TV ++ LL +EYKRRQA G K Sbjct: 480 DQDSLPPYEVLDAILERLVEREQPLASIVAEGFDKDTVMRIDRLLNIAEYKRRQAAPGVK 539 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 540 VTRKNFGRDRRYPITNRFRDK 560 >gi|238750370|ref|ZP_04611871.1| NAD+ synthase [Yersinia rohdei ATCC 43380] gi|238711301|gb|EEQ03518.1| NAD+ synthase [Yersinia rohdei ATCC 43380] Length = 540 Score = 621 bits (1602), Expect = e-175, Method: Composition-based stats. Identities = 232/556 (41%), Positives = 339/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL IA+AQLN +VGDI GN + + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRKLSIALAQLNWLVGDIEGNTERMLQTLHEQQKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + +D L++ + ++VG P +++ + N++ + G + A K LPNY Sbjct: 61 DFYQRCEAQLDRLQAAS--MATAVLVGHPWREEGNLYNALSLFANGKLQARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + RLG+LICED+W + +K GAE + S+NASPY Sbjct: 119 GVFDEKRYFSAGHDTCVVELKGYRLGLLICEDLWFD-GPVDAVKAAGAEVVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ LP++Y+NQ+GGQDELIFDG S FD + ++ F EQ Sbjct: 178 REKPYIRKTLMAAHCQRTGLPLVYLNQIGGQDELIFDGCSKVFDAAGTMTHRLAAFVEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 M + N + L Y A VL++RDYV KN F+ ++GLS Sbjct: 238 TMLQL---------NECEVVPMAAPAAELPPLAQVYEALVLAVRDYVTKNGFNGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++DVL I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQALMMPFRYTADISIADAKEEAEILGIEFDVLSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLSPMFAGTARDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++ + PSAEL P Q D+ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVITRPPSAELAPDQKDE 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + +++ VR V L+ +EYKRRQ+ VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVADGFDEAIVRKVIRLVDINEYKRRQSAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|331004931|ref|ZP_08328344.1| NAD synthetase [gamma proteobacterium IMCC1989] gi|330421255|gb|EGG95508.1| NAD synthetase [gamma proteobacterium IMCC1989] Length = 547 Score = 620 bits (1600), Expect = e-175, Method: Composition-based stats. Identities = 240/557 (43%), Positives = 346/557 (62%), Gaps = 15/557 (2%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRA-REEANRQGMDLILFTELFISGYPPEDLVFKK 60 + + + +AQ+NP+VGDI GN+AK + + DL++F EL + GYPPEDL+ + Sbjct: 1 MSLVNVVMAQINPLVGDIEGNVAKVIESTITSQQQHNADLVVFPELTLCGYPPEDLLLRS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S + A+ L S + A IVVG+P+++ N V +L G IA K +LPNY Sbjct: 61 SMDVRIADALLLLASQSFT--ATIVVGYPKREGGAHYNMVGVLQQGQWIAEYAKQHLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + F I + ICEDIW + K GA L ++NASP++ Sbjct: 119 QVFDEKRYFEAGKAATVFDFHGIPTALSICEDIW-HDEPLLQAKAAGANLLININASPFH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K ++R ++++ + + I+YVNQVGGQDEL+FDG SF + Q Q + E Sbjct: 178 QSKQQERVDLLSHRAKQGDMAIVYVNQVGGQDELVFDGGSFVVNADGQCPVQAPLYEEGL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 F+ + +S+ ++M +S ++ P+ + Y A VL LRDYV KN F KV++GLS Sbjct: 238 FLAQCACVPNMSEVSFM--ESVDSVAPPMCDLSVIYQALVLGLRDYVNKNCFQKVVLGLS 295 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG + V IM+P+ YTS S EDAA AK LG +YD + I + + Sbjct: 296 GGIDSALTLAIAVDALGADKVTAIMMPFLYTSELSKEDAAEQAKRLGVQYDSIAIEGVYS 355 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S + Q P+ + +N+Q+R RG +LMA+SN + ++LTT NKSE++VGY TLYG Sbjct: 356 AFMSSLEQQFSGLPTDLAEQNLQARCRGVLLMAISNKTGCLVLTTGNKSELAVGYSTLYG 415 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RNS G EVIP S++E+ PSAEL P Q D+ Sbjct: 416 DMAGGFDALKDVPKTMVFELAKYRNSMG--------DEVIPLSVIERPPSAELAPDQKDE 467 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 ++LPPY +LD I++R +E+++S + ++ ETV V L+ +EYKRRQ+PVG +I+ Sbjct: 468 DNLPPYEVLDQILERYIEHDQSADAIVNAGFDKETVYRVIRLVDINEYKRRQSPVGVRIS 527 Query: 540 AKSFGRDRLYPISNKFR 556 K FGRDR YPI+N ++ Sbjct: 528 KKGFGRDRRYPITNGWK 544 >gi|269138134|ref|YP_003294834.1| NAD synthase [Edwardsiella tarda EIB202] gi|267983794|gb|ACY83623.1| NAD synthase [Edwardsiella tarda EIB202] gi|304558179|gb|ADM40843.1| NAD synthetase / Glutamine amidotransferase chain of NAD synthetase [Edwardsiella tarda FL6-60] Length = 540 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 231/556 (41%), Positives = 334/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + + G D+++F+EL + GYPPEDL+++ Sbjct: 1 MSRTLSIALAQLNLLVGDIEGNAERMLAPLAQQQQAGADVVMFSELALCGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + L+ + + ++VG P +D E + N++ + G ++A K LPNY Sbjct: 61 DFHQRCQRQLARLQQASAE--IAVIVGHPWRDGECLYNALSVFAEGRLLARYYKQCLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + + RLG+LICED+W ++ L GAE L ++NASPY Sbjct: 119 GVFDEKRYFSAGDTPCTVTLKGYRLGLLICEDVWFDA-PVDALAAAGAEVLLTINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R+ ++ LP++Y+NQVGGQDEL+FDG S FD + L ++ F EQ Sbjct: 178 REKPYIRNTLLADHCRRTGLPLLYLNQVGGQDELVFDGCSKAFDARGALTHRLAAFDEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ +P Y A VL++RDYV KN F ++GLS Sbjct: 238 TQVRLD-------DGRLLPMASPAAELP--PLAQIYQALVLAVRDYVGKNGFQGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK VQ +M+P++YT+ S+ DA A A A+G ++D+L I + + Sbjct: 289 GGIDSALTLAIAVDALGKAQVQAVMMPFRYTADISVADAQAQALAMGVEFDILSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFAGTERDTTEENLQARCRGVVLMALSNKRRRLVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VFQLA +RN+ L+ IP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFQLARYRNT---------LSPAIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILQGYVEQDKSVAQLVADGFDEAVVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|257093881|ref|YP_003167522.1| NAD synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046405|gb|ACV35593.1| NAD+ synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 536 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 230/555 (41%), Positives = 323/555 (58%), Gaps = 23/555 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 LKIAIAQ+N VGD AGN + E A QG DL+L EL + GYPPEDL+ + F Sbjct: 2 PLKIAIAQINATVGDFAGNAQRILDFAERARAQGADLLLTPELSLCGYPPEDLLLRDDFC 61 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC + L S G ++VG P + N+ ++ G +A K LP+Y F Sbjct: 62 AACEHELALLASRVA--GIAVLVGHPEKRAAHCYNAATLITDGTRVATYYKQRLPSYEVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F SG + + +R G+ IC D+W+ + + GAE L LNASPY+ K Sbjct: 120 DEERYFDSGEGPCVLTLKGVRCGVNICADVWE-AGAADLARNAGAEVLLVLNASPYHIGK 178 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++R E++ +I+ LP++Y N GGQDEL+FDG SF D + L Q+ F E + Sbjct: 179 RERRTEVLRQRIASTGLPVVYANLAGGQDELVFDGGSFVLDSRGTLCCQLPQFEEALGIV 238 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++ + A+ + E Y A VL +RDY+ KN F IIGLSGGI Sbjct: 239 DF----------VDGEPQAAAIAPAPCLEAEVYQALVLGVRDYLGKNGFPGAIIGLSGGI 288 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V+ +M+P YT+ SL ++ + LG +YD + I + F Sbjct: 289 DSALTLCIAVDALGADKVRAVMMPSPYTAELSLAESREMVRLLGIRYDEIAIEPAMQTFA 348 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 +++ Q P+ EN+Q+RIRG ILMA+SN + +++LTT NKSE++VGY TLYGDM+ Sbjct: 349 AMLEQQFAGLPADTTEENLQARIRGMILMAISNKTGSLVLTTGNKSEMAVGYCTLYGDMA 408 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF +KD+ KT V++L+ WRN+ IP I+ + PSAEL+P QTDQ+SL Sbjct: 409 GGFAVIKDIAKTLVYRLSRWRNTRSYA---------IPERIISRPPSAELKPDQTDQDSL 459 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD I++ +E + S Q + + VR V HLL SEYKRRQAPVG ++T + Sbjct: 460 PPYEVLDAIVEAYMEKDLSPRQIIAQGHAEADVRRVVHLLKISEYKRRQAPVGIRVTQRG 519 Query: 543 FGRDRLYPISNKFRD 557 FG+D YPI+N++RD Sbjct: 520 FGKDWRYPITNRYRD 534 >gi|284006754|emb|CBA72011.1| glutamine-dependent NAD( ) synthetase [Arsenophonus nasoniae] Length = 540 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 242/556 (43%), Positives = 336/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + + QG DLILF+EL ++GYPPEDL+F+ Sbjct: 1 MNRTLNIALAQLNWLVGDIEGNCERMLQEAKAQQLQGADLILFSELSLTGYPPEDLLFRS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q CS +D LK + IVVG P Q E N++ G ++A K LPNY Sbjct: 61 DFHQRCSKQLDRLKEASQ--NIAIVVGHPWQQNEKCYNALSFFWQGQMVARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + F+ +LG LICED+W + +K GA+ L +NASPY Sbjct: 119 GVFDEKRYFYAGHESCVLSFKGYKLGFLICEDVWFD-EPVDRIKALGADVLIIINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ HLPI+Y+NQVGGQDELIFDG S F+GQ ++ + F+EQ Sbjct: 178 REKLHIRTRLLKSHSQRTHLPIVYLNQVGGQDELIFDGGSKVFNGQGEITHYLAQFAEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++N + + L Y A V++ RDY+ KN F VI+GLS Sbjct: 238 I---------QCKFNDGEPLPVANLAKTLSSTAQVYEALVMATRDYINKNGFSGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+NVQ +M+P+KYT+ S+ DA A LG ++ ++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDNVQAVMMPFKYTAEISIHDAREQATLLGIEFAIVSIEAMYD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + +S + EN+Q+R R ILMA+SN S ++LTTSNKSE +VGY +LYG Sbjct: 349 AFMAGLSPLFADMAPDTTEENLQARCRAIILMAISNKSGRLVLTTSNKSESAVGYTSLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKD+ KT VF+LA +RN+ IP ++E+ P+AEL P Q DQ Sbjct: 409 DMAGGFAVLKDVPKTLVFELAKYRNTISPN---------IPQRVIERPPTAELAPGQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYP+LD I++ VE ++S +++ TVR V L+ +EYKRRQAP+G +IT Sbjct: 460 DSLPPYPVLDAILEGYVEQDKSVSELVAAGFDEVTVRKVIKLVDINEYKRRQAPIGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 ++F +DR YPI++ F Sbjct: 520 IRNFNKDRRYPITSAF 535 >gi|119897651|ref|YP_932864.1| NAD synthetase [Azoarcus sp. BH72] gi|119670064|emb|CAL93977.1| NAD(+) synthase (glutamine-hydrolyzing) [Azoarcus sp. BH72] Length = 538 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 232/559 (41%), Positives = 329/559 (58%), Gaps = 23/559 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L IA+AQLN VGD+ GN + A A +G L++ EL +SGYPPEDL+ + Sbjct: 1 MNTALSIAVAQLNFTVGDLVGNADRIIEAISAARERGAGLLITPELALSGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F + C+ + + D +V+G P + N+ ++ G +IA K LPNY Sbjct: 61 DFYRGCAREVRRIAGHCRDF--CLVLGHPTERGGVYYNAASVIRDGEVIATYHKHLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F SG + +R+G+ IC D+W+ S + + GAE L SLNASP++ Sbjct: 119 EVFDEERYFESGVAPCVFEHGGVRIGVNICADVWE-SGPAEVARAAGAEVLVSLNASPFH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K + R+ ++ ++ LP++Y N VGGQDEL+FDGASF D +A+Q + F+ Sbjct: 178 IDKQQLRYAVLRDRVRETRLPVLYCNMVGGQDELVFDGASFALDRDGTVAYQSEAFAACI 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + S P E Y A V +RDY+ KN F IIGLS Sbjct: 238 DVLRFEQGRW----------SGGGHAAPKGTEADIYAALVCGVRDYLGKNGFPGAIIGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A+AVDALG + V +M+P YT+ SL+D+ K LG +YD + I +N Sbjct: 288 GGIDSALTLAVAVDALGADRVHAVMMPSPYTAQMSLDDSREMVKRLGVRYDEIAIEPAMN 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F L++ + EN+QSRIRG ILMALSN + A++LTT NKSE++ GY TLYG Sbjct: 348 VFADLLAPQFAGLAADTTEENLQSRIRGMILMALSNKTGAIVLTTGNKSEMATGYATLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKDLYKT V++LA+WRNS + EVIP +I+++ PSAEL+P Q DQ Sbjct: 408 DMAGGFAVLKDLYKTTVYRLAAWRNS---------VGEVIPQNIIDRPPSAELKPDQKDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD II+ +E++ES + + VR +L +EYKRRQAPVG ++T Sbjct: 459 DSLPPYEVLDAIIQAYMEHDESPREIIARGLPEADVRRTVTMLKRNEYKRRQAPVGIRVT 518 Query: 540 AKSFGRDRLYPISNKFRDH 558 + FGRD YPI+++++D Sbjct: 519 QRGFGRDWRYPITSRYQDE 537 >gi|188997459|ref|YP_001931710.1| NAD+ synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932526|gb|ACD67156.1| NAD+ synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 573 Score = 619 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 232/585 (39%), Positives = 341/585 (58%), Gaps = 40/585 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+++A+AQ+NPVVGD N K E+A + D++ F EL ++GYPPEDL+ K S Sbjct: 1 MKKIRLALAQINPVVGDFEYNYNKILEFIEKAKKLEADIVAFPELVLTGYPPEDLILKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ ++ LK + VVGF + ++ V N+ ++ I+ V K LPNY Sbjct: 61 FIEKNLQHLEKLKENI--DNIIAVVGFIDKQED-VFNAAAVIYNKEIVGVYHKQFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F G + + ++GI ICEDIW N GAE + ++NASPY Sbjct: 118 VFDENRYFQKGDGLLLLSIDNYKVGISICEDIWYPENPVNDYAILGAEVVININASPYSQ 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+KKR E++ + + I YVN VGGQDEL+FDG S D Q ++ + + F E+ Sbjct: 178 GKVKKREEMLKVRSRDNLISIAYVNMVGGQDELVFDGNSLILDAQGEILAKAESFEEELL 237 Query: 242 MTEWHYDQQLS---------------------------QWNYMSDDSASTMYIPLQEEEA 274 + + D+ + ++ + + + +E E Sbjct: 238 LADIDLDEIFRLQLKDNRLKNLRYLKKPINVKEVRLDYKIKNKNNQISQKIALDKKEIED 297 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 +Y A V+ LRDY+ KN F KV+IGLSGGIDS+L A IAVDALGKENV+ +++P YTS + Sbjct: 298 NYKALVVGLRDYINKNGFKKVVIGLSGGIDSSLTACIAVDALGKENVKGVLMPSHYTSKE 357 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 S+EDA AK L + +PI ++ + + + + EN+Q+RIRGNILMAL Sbjct: 358 SIEDAIELAKNLDIETFTIPIKNIFDKYLEEFQEIFKGLKPDTTEENLQARIRGNILMAL 417 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN +++ T NKSE+SVGY TLYGDM GGF LKD+ KT+V++L+ +RNS Sbjct: 418 SNKFGWIVIATGNKSEMSVGYSTLYGDMVGGFAVLKDVLKTKVYELSYYRNS-------- 469 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDE 513 +++VIP +L K PSAELRP+QTD+ L PYPILD II+ VE + + + + ++ Sbjct: 470 -ISKVIPDRVLTKPPSAELRPNQTDEAELLPYPILDQIIQFYVEQDLTVEEIVKLGFEEK 528 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 V+ + +L+ +EYKRRQAP+G KIT ++FG+DR PI+N+F++ Sbjct: 529 DVKKIINLIDKNEYKRRQAPIGIKITERAFGKDRRMPITNRFKEF 573 >gi|87198992|ref|YP_496249.1| NAD synthetase [Novosphingobium aromaticivorans DSM 12444] gi|87134673|gb|ABD25415.1| NH(3)-dependent NAD(+) synthetase [Novosphingobium aromaticivorans DSM 12444] Length = 573 Score = 619 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 255/558 (45%), Positives = 347/558 (62%), Gaps = 7/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+ L+I +AQLN VGD+A N+A RE A DLI+F EL + GYPPEDL+ K Sbjct: 19 MVDTLRITLAQLNQSVGDLAANVAAMLAVRERARD--ADLIVFPELQLIGYPPEDLIMKP 76 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + ++ ++ ++ L T DGG ++VG + N V +L+ G + A R K LPNY Sbjct: 77 ALVERATAELEKLARVTADGGPAMLVGSVFVRDGALHNGVALLEGGRVAATRFKYELPNY 136 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F+ G +P++F+ LG+ ICEDIW + ++C+HL + GAE +N SPY Sbjct: 137 GTFDEKRYFLPGPLPEPVLFKGAMLGLPICEDIW-HPDVCRHLAELGAEIFICINGSPYE 195 Query: 181 HNKLKKRHE-IVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +K R + + + +P+ YVN+VGGQDE++FDGASF + + QM + E Sbjct: 196 IDKDVLRIDGVAKRRAIDTGIPLAYVNRVGGQDEIVFDGASFVVGPEGAVWVQMPDWEES 255 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 T WH + + E+ Y A V++LRDYV KN F V++GL Sbjct: 256 VVTTVWHRSDFGDANRWRCEAGEVHELAEHPED--IYCAMVMALRDYVNKNRFPGVVLGL 313 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+CAAIAVDALG + V +MLP +YTS +SL+DAA CA+ LG + D +PI V Sbjct: 314 SGGIDSAICAAIAVDALGPDRVWCVMLPSRYTSQESLDDAAGCARMLGVRLDTVPIGPAV 373 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + F +++ + ENIQSRIRG LMALSN ML+TT NKSE+SVGY T+Y Sbjct: 374 DAFDGMLAPVFAGRQPDLTEENIQSRIRGVTLMALSNKFGPMLVTTGNKSEMSVGYATIY 433 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NPLKD YKT VF ++ WRNSH GLGP V+P I+ K PSAELRP Q D Sbjct: 434 GDMNGGYNPLKDAYKTTVFAVSEWRNSHRPKIGLGPDGPVMPQRIITKPPSAELRPDQKD 493 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLPPY +LD I++ +VENE+S + + +TV +E LL +EYKRRQAP G K+ Sbjct: 494 SDSLPPYDVLDAILQGLVENEKSVDQIVAEGFERDTVARIERLLNLAEYKRRQAPPGVKL 553 Query: 539 TAKSFGRDRLYPISNKFR 556 A+++GRDR YPI++ FR Sbjct: 554 GARNYGRDRRYPITHGFR 571 >gi|313200694|ref|YP_004039352.1| nad+ synthetase [Methylovorus sp. MP688] gi|312440010|gb|ADQ84116.1| NAD+ synthetase [Methylovorus sp. MP688] Length = 540 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 228/552 (41%), Positives = 325/552 (58%), Gaps = 17/552 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++AIAQ+N VVGD+AGN A+ EA G L+L EL +SGY P+DL+ ++ F Sbjct: 1 MQVAIAQINCVVGDLAGNAARILSYAHEAKAAGASLMLTPELALSGYSPQDLLLREDFTH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + L +VVG P ++ N+ +L G I+ K LPN+S F Sbjct: 61 HCQRELQALAKALP-ADITVVVGHPHREHGRCYNAASVLQGGRIVLTYHKHALPNHSVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G + +R GILIC D+W+ K K+ GAE L LNASP++ K Sbjct: 120 EVRYFSPGNKAGVFEHQGVRCGILICADVWEP-GPAKVSKQAGAELLLVLNASPFHLEKQ 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R++++ ++ LP++Y N VGGQDEL+FDG S D Q+ F+EQ + Sbjct: 179 QQRYKVLGKRVEETGLPLVYANLVGGQDELVFDGNSVVIDRCGAPVQQLPAFTEQLALVS 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q ++ + L EE+ Y A L LRDYVQKN F ++GLSGGID Sbjct: 239 IDLSPQNRANPLPAEIAPG-----LTREESAYQALTLCLRDYVQKNGFPGAVLGLSGGID 293 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG + V +M+P ++T+ S++DA A+ LG KY LPI L + F + Sbjct: 294 SALTLAIAVDALGADKVHAVMMPSEFTADMSVDDARQMAQLLGVKYTELPIKPLFDQFCA 353 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +++ + EN+Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM+G Sbjct: 354 TLAEPFTGTSFDLTEENLQARIRGMLLMALSNKFGSIVLTTGNKSEMAVGYSTLYGDMAG 413 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V++LA +RNS L++VIP I+ + PSAELR QTDQ+SLP Sbjct: 414 GFAVLKDISKTLVYRLARYRNS---------LSQVIPERIIIRPPSAELRHGQTDQDSLP 464 Query: 485 PYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD I++ VE + S Y ++ V V +L+ +EYKRRQ+P+G ++T + F Sbjct: 465 PYDVLDAIMEAYVERDSSRQEIIAMGYREQDVARVLNLIDRNEYKRRQSPIGVRVTERGF 524 Query: 544 GRDRLYPISNKF 555 G DR YP+ ++F Sbjct: 525 GLDRRYPVVSRF 536 >gi|39935055|ref|NP_947331.1| NAD synthetase [Rhodopseudomonas palustris CGA009] gi|39648906|emb|CAE27427.1| NH3-dependent NAD synthetase [Rhodopseudomonas palustris CGA009] Length = 584 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 275/561 (49%), Positives = 369/561 (65%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L I++AQLNP VGDIAGN KAR AR A G DL+++ ELFI+GYPPEDLV K +F Sbjct: 6 RLTISLAQLNPTVGDIAGNADKARAARRRAAADGADLVVYPELFIAGYPPEDLVLKPAFQ 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +AI+ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 66 AACRAAIEDLARETADGGPAMLIGSPWVDNGKLYNACALLDGGRIAAIRHKVNLPNYGVF 125 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASP 178 EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L N SP Sbjct: 126 DEKRVFARGPVSGPVTIRGVRIGVPICEDTWLEESEDYENVVECLAETGAELLVVPNGSP 185 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++YVNQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 186 YARGKNDMRMSVSVARVTESDLPLVYVNQVGGQDELVFDGASFVLNADRTLAAQLPGFVE 245 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + + + + ++ +EADY ACVL LRDYV+KN F V++G Sbjct: 246 SVTTLSFVKGAAGWRCD-------GPVAPVIEGDEADYAACVLGLRDYVRKNGFPGVLLG 298 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG + V+ +MLP++YT+ SL+DA A ALG Y+VLPI Sbjct: 299 ISGGIDSALCAAIAVDALGADKVRGVMLPFRYTAQISLDDAGRLASALGFGYEVLPIAQA 358 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F +++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 359 VEGFEAILAKPFAGLERDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 418 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKTQVF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 419 YGDMNGGFNPIKDIYKTQVFRLSSLRNRWKPDDALGPDGEVIPESIIIRPPTAELRENQT 478 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE EE + ++ +TV ++ LL +EYKRRQA G K Sbjct: 479 DQDSLPPYDVLDAILERLVEREEPLASIVADGFDKDTVVRIDRLLNIAEYKRRQAAPGVK 538 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 539 VTRKNFGRDRRYPITNRFRDK 559 >gi|75675418|ref|YP_317839.1| NAD synthetase [Nitrobacter winogradskyi Nb-255] gi|74420288|gb|ABA04487.1| NH(3)-dependent NAD(+) synthetase [Nitrobacter winogradskyi Nb-255] Length = 583 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 275/564 (48%), Positives = 363/564 (64%), Gaps = 14/564 (2%) Query: 1 ML-KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M KI + QLNP VGDI GN AKAR AR +A G L+ ELFI+GYPPEDLV + Sbjct: 1 MTETTFKITLGQLNPTVGDIVGNAAKARAARAQAKADGAALVALPELFIAGYPPEDLVLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +F AC AI+ L +T DGG +++G P D + N+ +LD G + A+R K+NLPN Sbjct: 61 PAFQAACREAIEALARETSDGGPAMLIGTPWVDDGKLYNAYALLDEGRVAALRFKVNLPN 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSL 174 Y F EKR F G P+ R +R+G+ ICED W + N+ + L + GAE L Sbjct: 121 YGVFDEKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESAEYENVVECLAETGAEILVVP 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 N SPY K R I +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ Sbjct: 181 NGSPYAKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLP 240 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E F +W + + A + + ++ADY ACVL LRDYV+KN F Sbjct: 241 FFEESVFTLQWTRSAEGWRC-------AGPVAPQIDGDKADYAACVLGLRDYVRKNGFPG 293 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++G+SGGIDSALCAAIAVDALG E V+ +MLP+++T+ SL+DAA A ALG +YDVLP Sbjct: 294 VLLGVSGGIDSALCAAIAVDALGAEQVRGVMLPFRFTAQVSLDDAARLATALGIRYDVLP 353 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I VN F ++S P I EN+QSR RG +LMA+SN AM++TT NKSE+SVG Sbjct: 354 IAQAVNGFEEILSGVFAGAPRDITEENLQSRARGTLLMAMSNKLGAMVVTTGNKSEMSVG 413 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGFNP+KD+YKT+V ++AS RN+ LGP EVIPP + + P+AELR Sbjct: 414 YATLYGDMNGGFNPIKDIYKTEVLRMASLRNAWKPDGALGPSGEVIPPGAISRPPTAELR 473 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAP 533 Q DQ+SLPPY +LD I++R+VE EE + ++ + V V+ LL +EYKRRQA Sbjct: 474 EGQLDQDSLPPYDLLDAILERLVEREEPLAAIVAEGFDHDVVVRVDRLLNAAEYKRRQAA 533 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 G K+T ++FGRDR YPI+N+FRD Sbjct: 534 PGVKVTRRNFGRDRRYPITNRFRD 557 >gi|293394849|ref|ZP_06639139.1| NAD(+) synthase [Serratia odorifera DSM 4582] gi|291422600|gb|EFE95839.1| NAD(+) synthase [Serratia odorifera DSM 4582] Length = 540 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 234/556 (42%), Positives = 343/556 (61%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + + +E + G DL++FTEL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNLLVGDIEGNSERMLQIVQEQQKAGADLVMFTELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C ++ L+ + G I+VG P ++ + + N++ + G + A K LPNY Sbjct: 61 DFYQRCDLQLNRLQQAS--GEVAILVGHPWREGDKLYNALSLFADGELRARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + + + RLG+LICED+W K GAE + S+NASPY Sbjct: 119 GVFDEKRYFHAGQESCVVELKGYRLGLLICEDLW-FPEPIDAAKAAGAEIVLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ G +LP++Y+NQ+GGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLMAGHCRRTNLPLVYLNQIGGQDELIFDGCSKVFDAAGNMTHRLAAFAEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ + +A +P + Y A VL++RDYV KN F ++GLS Sbjct: 238 TLLQF-------NEREVVPMTAPAAELPQLAQ--IYEALVLAVRDYVNKNGFKGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGKE VQ +M+P++YT+ S+ DA A+ LG ++DV+ I + + Sbjct: 289 GGIDSALTLAIAVDALGKEKVQALMMPFRYTADISIADAKEEAEILGVEFDVVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN ++++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFAGTERDTTEENLQARCRGVVLMALSNKRRSIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE + S ++ +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVERDMSVVDLVAAGFDEAIVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|270308329|ref|YP_003330387.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides sp. VS] gi|270154221|gb|ACZ62059.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides sp. VS] Length = 566 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 226/572 (39%), Positives = 327/572 (57%), Gaps = 28/572 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A ++A G D+I F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIVGNIQKARSLGADVIAFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ A+DT+ + G ++VG+ +G+ NS ++ G +I KI LPNY Sbjct: 61 FVEENLHALDTVIKASQ--GITVIVGY-VNSSDGLHNSAAVIHNGCLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +++G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFMPGNRCPVYTICGLQVGVNICEDIWFTSGPSTAQASKGAELIINISASPYHL 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSNRARENRVYIAYTNMVGGQDELVFDGASNIFDYNGNLVLRGKQFQEDLL 237 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMY-----------------IPLQEEEADYNACVLSLR 284 + + Q + ++ S +PL + Y A +L + Sbjct: 238 VLDLDIPISPVQRDMNTEIPDSIFVSASGLSEPKLPVENSDSVPLDADAEVYQALLLGTK 297 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F KV+IGLSGGIDS+L AAIA DALG +NV +++P +Y+S S+ D+ A+ Sbjct: 298 DYINKNGFKKVVIGLSGGIDSSLVAAIATDALGSDNVVGVIMPSRYSSAGSISDSLRLAE 357 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L K +PI + F S +S+ + ENIQ+RIRGN+LMALSN ++L Sbjct: 358 NLRIKTLQIPIDPIFKSFLSTLSEVFAGTETDTTEENIQARIRGNLLMALSNKFHWLVLN 417 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNKSE ++GY TLYGDM+GGF +KD+ K V++LA RN E+IP ++ Sbjct: 418 TSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLAHNRNKSAGF-------ELIPHNV 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLY 523 L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S + + V+ V ++ Sbjct: 471 LTKPPSAELKPNQFDTDSLPPYEVLDPILEAYVEQDKSIDQIVALGFEESIVKRVVKMVD 530 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 531 RSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|299133610|ref|ZP_07026804.1| NAD+ synthetase [Afipia sp. 1NLS2] gi|298591446|gb|EFI51647.1| NAD+ synthetase [Afipia sp. 1NLS2] Length = 584 Score = 618 bits (1593), Expect = e-174, Method: Composition-based stats. Identities = 269/561 (47%), Positives = 362/561 (64%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K + +AQLNP VGDIAGN AKAR AR +A G L++ ELF+ GYPPED+V K SF Sbjct: 6 KFTVTLAQLNPTVGDIAGNAAKARDARAKAAADGAALVVLPELFLCGYPPEDIVLKPSFQ 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 C A++ L +T DG +++G P ++ + N+V +LD G I +R K NLPNY F Sbjct: 66 ARCRIAVEELARETSDGSPAVLIGTPWVEEGKLYNAVALLDGGRIAGLRFKANLPNYGVF 125 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASP 178 EKR F G + P+ R +R+G+ ICED W + N+ + L + GAE L N SP Sbjct: 126 DEKRIFARGPAAGPLTIRGVRIGVPICEDTWMEESAEYENVVECLSETGAEILIVPNGSP 185 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + G+++ LP +YVNQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 186 YARAKNDIRLSMAVGRVTESGLPFVYVNQVGGQDELVFDGASFALNADRSLAAQLPCFEE 245 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 W + + ++ + ADY ACVL LRDYV KN F V++G Sbjct: 246 VTTTLTWTKSAKGWTCK-------GPISPLIEGDRADYAACVLGLRDYVGKNGFPGVLLG 298 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALC AIAVDA+G E V+ +MLP+++T+ +S+EDAA A+ LG +YDVLPI Sbjct: 299 ISGGIDSALCLAIAVDAIGVERVRGVMLPFRFTAKESIEDAARIARGLGIRYDVLPIAAA 358 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 VN F ++ +P + EN+Q+R RG +LMA+SN ML+TT NKSE+SVGY TL Sbjct: 359 VNGFEDILKDVFNGKPRDVTEENLQARTRGVLLMAISNKFGDMLVTTGNKSEMSVGYATL 418 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKT+VF+L+S RNS LGP +VIP SI+ + P+AELR +QT Sbjct: 419 YGDMNGGFNPIKDIYKTEVFRLSSLRNSWKPEGALGPSGKVIPVSIIARPPTAELRENQT 478 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY ILD I++R+VE + S ++ +TV ++ LL +EYKRRQA G K Sbjct: 479 DQDSLPPYEILDGILERLVERDMSVAEIVGDGFDRDTVLRIDRLLNLAEYKRRQAAPGVK 538 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD+ Sbjct: 539 VTRKNFGRDRRYPITNRFRDN 559 >gi|254482845|ref|ZP_05096082.1| NAD synthase family protein [marine gamma proteobacterium HTCC2148] gi|214036926|gb|EEB77596.1| NAD synthase family protein [marine gamma proteobacterium HTCC2148] Length = 543 Score = 617 bits (1592), Expect = e-174, Method: Composition-based stats. Identities = 220/557 (39%), Positives = 329/557 (59%), Gaps = 19/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMD-LILFTELFISGYPPEDLVFKK 60 + L I +AQ+N +VGD GN + + A +++F EL +SGYPPEDL+ + Sbjct: 1 MASLNILMAQMNTLVGDFDGNTKRVIEIVQSAIDTHEQPVVVFPELTLSGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +++ L S + A +V+G+P+++ + N+ ++ G ++A K LPNY Sbjct: 61 SIELRVDQSLELLCSQLPEA-AWVVIGYPKREGGELYNAAGVIHDGKLVAEYRKQCLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F+ G + + + +++ + ICEDIW+ + + GAE L +LN+SPY+ Sbjct: 120 QVFDEKRYFVPGSAPCVLNIQGVQVALSICEDIWE-KHPTADAAEAGAEILLNLNSSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R E+V + PI+YVNQVGGQDEL+FDG SF +A F E Sbjct: 179 RGKRGERWEMVAERARQAAFPIVYVNQVGGQDELVFDGGSFAVTADGTVAAAAPSFEEGE 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + HYD + + S + P+ E A + A V+ +RDYV KN F V++GLS Sbjct: 239 YW--LHYDNENKNQPF----SGQAVNAPMNEMAATWQALVMGVRDYVNKNGFKGVVLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A+AV+ALG E V+ IM+P++YTS S++DAA +K G + V+ I ++ Sbjct: 293 GGIDSALTLAVAVEALGPERVEAIMMPFRYTSQMSVDDAAEQSKTQGVTHTVISIENIYA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + + EN+Q+R RG +LM++SN ++LTT NKSE++VGY TLYG Sbjct: 353 SFMASLEEEFAGTTPDTTEENLQARCRGVLLMSISNKKGVLVLTTGNKSEMAVGYSTLYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L +RN+ L IP ++++ PSAEL P Q D+ Sbjct: 413 DMAGGFDVLKDVPKTLVFELCRYRNT---------LGPCIPQRVIDRPPSAELAPDQKDE 463 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE + S D ++ E V+ V L+ +EYKRRQAP+G +IT Sbjct: 464 DSLPPYDILDQILEMYVERDMSAEAIIDHGFDREQVQRVLRLVDINEYKRRQAPIGVRIT 523 Query: 540 AKSFGRDRLYPISNKFR 556 + FGRDR YPI++ +R Sbjct: 524 RRGFGRDRRYPITSGWR 540 >gi|237756468|ref|ZP_04585003.1| glutamine-dependent NAD(+) synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691369|gb|EEP60442.1| glutamine-dependent NAD(+) synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 573 Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats. Identities = 228/585 (38%), Positives = 341/585 (58%), Gaps = 40/585 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+++A+AQ+NPVVGD N K E+A + D++ F EL ++GYPPEDL+ K S Sbjct: 1 MKKIRLALAQINPVVGDFEYNYNKILEFIEKAKKLEADIVAFPELALTGYPPEDLILKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ ++ LK + +VGF + ++ V N+ ++ I+ V K LPNY Sbjct: 61 FIEKNLYYLEKLKENV--DNIIAIVGFIDKQED-VFNAAAVIYNKEIVGVYHKQFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F G + + ++G+ ICEDIW N GAE + ++NASPY Sbjct: 118 VFDENRYFQKGDGLLLLSIDNYKVGVSICEDIWYPENPVNDYAILGAEVVININASPYSQ 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K+K+R E++ + + I YVN VGGQDEL+FDG S D Q ++ + + F E+ Sbjct: 178 GKVKRREEMLKVRSRDNLISIAYVNMVGGQDELVFDGNSLILDTQGEILAKAESFEEELL 237 Query: 242 MTEWHYDQQLS---------------------------QWNYMSDDSASTMYIPLQEEEA 274 + + D+ + ++ + + + +E E Sbjct: 238 LADIDLDEIFRLQLKDNRLKNLRYLKKPINVKEIRLDYKIKNKNNQISQKIALDRKEIED 297 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 Y A V+ LRDY+ KN F KV+IGLSGGIDS+L A IAVDALGKENV+ +++P +YTS + Sbjct: 298 TYKALVVGLRDYINKNGFKKVVIGLSGGIDSSLTACIAVDALGKENVKGVLMPSQYTSKE 357 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 S+EDA AK L + +PI ++ + + + + EN+Q+RIRGNILMAL Sbjct: 358 SIEDALELAKNLDIETFTIPIKNIFDKYLEEFQEIFKGLKPDTTEENLQARIRGNILMAL 417 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN +++ T NKSE+SVGY TLYGDM GGF LKD+ KT+V++L+ +RNS Sbjct: 418 SNKFGWIVIATGNKSEMSVGYSTLYGDMVGGFAVLKDVLKTKVYELSYYRNS-------- 469 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDE 513 +++VIP +L K PSAELRP+QTD+ L PYPILD II+ VE + + + + ++ Sbjct: 470 -ISKVIPDRVLTKPPSAELRPNQTDEAELLPYPILDQIIQFYVEQDLTVEEIVKLGFEEK 528 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 V+ + +L+ +EYKRRQAP+G KIT ++FG+DR PI+N++++ Sbjct: 529 DVKKIINLIDKNEYKRRQAPIGIKITERAFGKDRRMPITNRYKEF 573 >gi|317493146|ref|ZP_07951569.1| NAD synthase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918806|gb|EFV40142.1| NAD synthase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 540 Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats. Identities = 233/556 (41%), Positives = 338/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + E + G DL++F+EL +SGYPPEDL+++ Sbjct: 1 MSRSLSIALAQLNWLVGDIEGNTERMLNTLCEQRKAGADLVMFSELALSGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F C + +D L+ + D ++VG P ++ E + N++ + G ++A K LPNY Sbjct: 61 DFYLRCQAQLDRLQQASTD--IAVLVGHPWREGEHLYNALSLFSEGQLVARYFKQQLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G+ + + + RLG+LICED+W + + GAE L S+NASPY Sbjct: 119 GVFDEKRYFSAGHESCVVELKGYRLGLLICEDLWFD-GPVDAVAAAGAEVLLSINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++T LP++Y+NQVGGQDELIFDG S FD + ++ F+EQ Sbjct: 178 REKPYIRKTLLTSHCQRTGLPLVYLNQVGGQDELIFDGCSKGFDASGNMTHRLAAFAEQT 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + H M + L E Y A VL++ DYV KN F ++GLS Sbjct: 238 ALFNLHD---------MQVEPMVAPAASLPELAQIYEALVLAVHDYVTKNGFQGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK+ VQ +M+P++YT+ S+ DA A+ LG ++D++ I + + Sbjct: 289 GGIDSALTLAIAVDALGKDKVQAMMMPFRYTADISIADAKEEAEILGVEFDIVSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPMFAGTERDTTEENLQARCRGVVLMALSNKRRRLVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L+ +RN+ ++ VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLSEYRNT---------VSYVIPQRVIDRPPSAELAPDQLDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE ++S + +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILEGYVEQDKSVADLVAAGFDEAVVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|310816658|ref|YP_003964622.1| glutamine-dependent NAD(+) synthetase [Ketogulonicigenium vulgare Y25] gi|308755393|gb|ADO43322.1| glutamine-dependent NAD(+) synthetase [Ketogulonicigenium vulgare Y25] Length = 554 Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats. Identities = 247/560 (44%), Positives = 346/560 (61%), Gaps = 9/560 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNPVVGDI N A+ARR +A G D I+ E+F+ GY +DLV + Sbjct: 1 MGETFRLTLAQLNPVVGDIEANAARARRVFHDARAAGSDFIVLPEMFLIGYQAQDLVLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++A+ L DT DGG + +G P ++ + + N+ IL G + A+ K LPNY Sbjct: 61 AFQRDAAAALAQLARDT-DGGPALGIGLPWREGDELFNAYAILSGGKVQAMVRKHELPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E+R F +G + P+ F R+G+ ICED W ++ + + + GAE L N SPY Sbjct: 120 GVFDERRYFAAGPISGPVAFEGGPRIGLPICEDAW-FPDVAEAMAESGAEILVVPNGSPY 178 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R + + +++ LP++Y+N VGGQD+ +FDG SF LA Q+ F+E Sbjct: 179 SRGKYDVRVQRMVSRVTENDLPLVYLNMVGGQDDQVFDGGSFVLGHGGGLAAQLPFFTE- 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 T H D + ++ ++P E DY A +LRDYV+K+ F +V++GL Sbjct: 238 ---TVSHIDFTRCETGGWQPQRSTLAHVPD-EHALDYQAMTTALRDYVRKSGFSRVLLGL 293 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AAIAVDALG ENV+ +MLP +YTS SLEDA CA+ALG K D + I V Sbjct: 294 SGGIDSALVAAIAVDALGAENVRGVMLPSRYTSDHSLEDAEVCARALGIKLDTVEIAGPV 353 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + ++ + + ENIQSR+RG +LMA SN MLLTT NKSE+ VGY T+Y Sbjct: 354 AAAEAALAPLFAGHDADLTEENIQSRMRGLLLMAQSNKFGEMLLTTGNKSEMCVGYATIY 413 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KDLYKT+VF +A+WRN++ GP EVIP I+ K PSAELRP Q D Sbjct: 414 GDMNGGYNPIKDLYKTRVFAVAAWRNANHFDWMAGPAGEVIPTRIITKPPSAELRPDQKD 473 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLPPYP+LD I+ +V+ + S + YN ETV+ VEHL+ SEYKR Q+ G K+ Sbjct: 474 EDSLPPYPVLDAILDLMVDRDASVADCVAAGYNRETVKRVEHLVAISEYKRFQSAPGVKL 533 Query: 539 TAKSFGRDRLYPISNKFRDH 558 + ++ DR YPI N++RD Sbjct: 534 SRRALWLDRRYPIVNRWRDK 553 >gi|144901045|emb|CAM77909.1| NH3-dependent NAD+ synthetase protein [Magnetospirillum gryphiswaldense MSR-1] Length = 552 Score = 616 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 259/560 (46%), Positives = 351/560 (62%), Gaps = 9/560 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L IA AQ+NPVVGD+AGN+A+ R AR +A G L++F EL +SGYPPEDLV K Sbjct: 1 MSDSLSIAFAQINPVVGDVAGNVARIRAARAQAAADGAQLVVFPELVVSGYPPEDLVLKS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ A A++ L +DT D G I+VG P + + N+ ++LD G + A R K +LPNY Sbjct: 61 AFLDAIEQAVEDLAADTADNGPAILVGAPWRVAGRLHNAALLLDHGRVAASRLKHHLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G PI FR +RLG+L+CED+W S++ + L + GAE L N SP+ Sbjct: 121 GVFDEARVFAPGPVPGPIQFRGVRLGVLVCEDMW-YSDVAETLAECGAEILVVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K+ R +++ LP+IYVNQ+GGQDEL+FDGASF D + ++ ++ ++EQ Sbjct: 180 LDKVGVRLSRAKERVAETGLPLIYVNQLGGQDELVFDGASFALDAKGEVMVRLPAWAEQV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 T WH + + + IP ++ E Y A VL LRDYV KN F V++GLS Sbjct: 240 VTTRWH------KQDGAWSVAGPIAPIPERD-EDLYQAMVLGLRDYVGKNGFPGVVLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+A DALG + V +M+P YTS +SL+DAA AK LGC+ D + I + Sbjct: 293 GGIDSALAAAVAADALGADKVWCVMMPSPYTSQESLDDAAGVAKMLGCRLDNINIGPAMG 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +++ + I EN+QSR RG LMALSN M+L+T NKSE+S GY TLYG Sbjct: 353 AFDHMLAPHFAGTNADITEENLQSRARGVTLMALSNKFGPMVLSTGNKSEMSTGYATLYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+ LKD+YKT VF + WRN + LGP V+P ++ K PSAEL+P QTDQ Sbjct: 413 DMCGGYAVLKDVYKTAVFAVCRWRNGNFPAGALGPNGPVMPERVITKPPSAELKPDQTDQ 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 ++LPPY +LD I+ ++E E S + Y+D VR + +L +EYKRRQAP G KIT Sbjct: 473 DTLPPYDVLDGILSCLIEGELSVEATVAKGYDDAMVRRIWRMLDRAEYKRRQAPPGVKIT 532 Query: 540 AKSFGRDRLYPISNKFRDHI 559 +SFG+DR YPI+N F + Sbjct: 533 GRSFGKDRRYPITNGFTRSV 552 >gi|254490943|ref|ZP_05104125.1| NAD synthase family [Methylophaga thiooxidans DMS010] gi|224463852|gb|EEF80119.1| NAD synthase family [Methylophaga thiooxydans DMS010] Length = 546 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 231/557 (41%), Positives = 333/557 (59%), Gaps = 21/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 + + + + Q+NPVVGD+AGN+ K + +A Q G DL++F EL ++GYPPEDL+ + Sbjct: 1 MNDVTLVMGQINPVVGDVAGNVVKIITSAHQARDQFGADLVVFPELTLTGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPR-QDQEGVLNSVVILDAGNIIAVRDKINLPN 119 ++ + A+DTL+ G I++G P + ++ + N+ ++ GN +A K LPN Sbjct: 61 GLLKRVNKALDTLQKHVE--GVAIIIGHPDGEVRKELYNAASMIVDGNRVATYFKHKLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 YS F EKR F+ G + F+ IR G+ +CEDIW C+ GAE L +LNASPY Sbjct: 119 YSVFDEKRYFVEGKEACVVDFKGIRFGLTLCEDIWFTEPACQ-AADAGAEILINLNASPY 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K + R V ++ LP++YVNQVGGQDEL+FDG SF D + + + F Sbjct: 178 RMGKWQLREAEVKKRVLETGLPVVYVNQVGGQDELVFDGCSFALDHRGEKVARAPAFESG 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + + + M I E Y A LRDY++KN+F V+IGL Sbjct: 238 LYPLTVNRSENGIVQ------IHGQMAIKENEHAMIYKALTTGLRDYIEKNHFPGVVIGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL A+AVDA+G E V +M+P +YT+ SL+DA A A LG Y V+ I + Sbjct: 292 SGGIDSALTLALAVDAIGAEKVHAVMMPTRYTAQISLDDAKAMADGLGVHYSVMSIEPVF 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + +S P ENIQ+R RG ILMALSN + +M+L T NKSE++VGY TLY Sbjct: 352 ESFLTTLSDQFTGLPVDTTEENIQARCRGIILMALSNKTGSMVLATGNKSEMAVGYSTLY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG++PLKD+YKT V+QL+ +RN+ + VIP I+ + PSAEL Q D Sbjct: 412 GDMAGGYSPLKDVYKTMVYQLSHYRNTRSM---------VIPERIITRPPSAELAADQLD 462 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY +LD I++R + ++ F + + Y+ E V V ++ +EYKRRQAP G +I Sbjct: 463 QDSLPPYELLDKILERYIADDSCFEDLVAEGYDAEVVARVIKMVDRNEYKRRQAPPGIRI 522 Query: 539 TAKSFGRDRLYPISNKF 555 ++++FGRDR YPI++ + Sbjct: 523 SSRAFGRDRRYPITSGY 539 >gi|253996052|ref|YP_003048116.1| NAD+ synthetase [Methylotenera mobilis JLW8] gi|253982731|gb|ACT47589.1| NAD+ synthetase [Methylotenera mobilis JLW8] Length = 539 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 226/554 (40%), Positives = 323/554 (58%), Gaps = 23/554 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+N +VGD+AGN K A QG L++ EL + GY PEDL+ + F++ Sbjct: 1 MKIAIAQINCIVGDLAGNAKKIVAYAASAKEQGATLVVTPELSLCGYSPEDLLLRPDFLR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC + TL D ++VG P Q+ E N+ +L+ G+I+A K LPNY F Sbjct: 61 ACEDTLQTLAQQLSD--ITVIVGHPHQEGEQCFNAASVLEGGSIVATYHKQVLPNYGVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F SG +++G+LIC D+W+ K GAE L ++N SPY+ K Sbjct: 119 EKRYFSSGAEALVFNHCGVKVGVLICADVWEPK-PALLAKMAGAELLIAMNGSPYHMKKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R E++ + +LP++YVN VGGQDEL+FDGASF + Q ++ ++ F Q + E Sbjct: 178 SARFEVLKQRAVENNLPVVYVNMVGGQDELVFDGASFVLNAQGEVVAELDAFESQLEVIE 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + + L E Y A L L DY+ KN F V+IGLSGG+D Sbjct: 238 FD----------HAQPIYGEITPSLSLEATVYKALKLGLADYINKNGFPGVVIGLSGGVD 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A+AVDA+G + V +M+P ++T+ S+ DA A +G KY+ + I L + + S Sbjct: 288 SALTLALAVDAIGADKVHAVMMPSEFTADISVNDAREMADIVGVKYEEIAIKPLFDSYLS 347 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + P EN+Q+RIRG +LMA+SN ++++TT NKSE++VGY TLYGDM+G Sbjct: 348 ALSPQFGDMPFDATEENLQARIRGMLLMAISNKFGSIVVTTGNKSEMAVGYCTLYGDMAG 407 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V++L ++RN L+ VIP I+ + PSAELR +Q DQ+SLP Sbjct: 408 GFALLKDVPKTLVYRLCAYRNQ---------LSRVIPERIITRPPSAELRANQVDQDSLP 458 Query: 485 PYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD II+ VEN+ S Y + V ++ +EYKRRQ+PVG +IT K F Sbjct: 459 PYDVLDAIIEAYVENDLSRAEIVALGYPISDINRVIAMIDRNEYKRRQSPVGVRITDKGF 518 Query: 544 GRDRLYPISNKFRD 557 G+DR YPI+ K + Sbjct: 519 GKDRRYPITAKLSE 532 >gi|294010307|ref|YP_003543767.1| NAD+ synthase (glutamine-hydrolyzing) [Sphingobium japonicum UT26S] gi|292673637|dbj|BAI95155.1| NAD+ synthase (glutamine-hydrolyzing) [Sphingobium japonicum UT26S] Length = 553 Score = 616 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 255/560 (45%), Positives = 345/560 (61%), Gaps = 13/560 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL IA+AQ+ VGD+A N R A DLI++ EL + GYPPEDLV K Sbjct: 1 MTDKLVIALAQMTQSVGDLAANADAMLEWRTRAME--ADLIVYPELQLIGYPPEDLVLKP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + + +D L T DGG ++VG Q + N V +L+ G + A+R K LPNY Sbjct: 59 ALVDRANHELDRLAQATADGGPAMLVGTVVASQGVLFNVVALLEDGAVTAIRQKRELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G PI FR +++G+ ICEDIW + HL+ +GAE L S N SP+ Sbjct: 119 GTFDEKRLFAPGPLPAPIDFRGVKIGVPICEDIWFPF-VTAHLRAEGAEILISPNGSPFE 177 Query: 181 HNKLKKRHEIVTG-QISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +K +R V G ++ LP++Y+N+VGGQDEL+FDGASF +G LA Q+ + E Sbjct: 178 VDKDDRRINAVAGTRVRETGLPLVYLNRVGGQDELVFDGASFVMNGDLSLAHQLPDWEEA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 +T W ++ QW + + ++ + YNA VL LRDYV KN F V++GL Sbjct: 238 LVLTHW--EKWEGQWVCLPGER----HVLDERPADIYNAMVLGLRDYVNKNRFPGVVLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AA+AVDALG + V +M+P ++TS +SL+DA CA+ LG +YD +PI V Sbjct: 292 SGGIDSALSAAVAVDALGADRVWCVMMPSRFTSRESLDDAIECARLLGVRYDSIPIEPAV 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F ++++ + ENIQSRIRG LMALSN MLLTT NKSE+SVGY T+Y Sbjct: 352 EAFDAMLADVFTGRQRDLTEENIQSRIRGVTLMALSNKYGHMLLTTGNKSEMSVGYATIY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG--LGPLTEVIPPSILEKSPSAELRPHQ 477 GDM+GG++ LKD YKT VF L WRN + + G GP V+P ++ K PSAELR +Q Sbjct: 412 GDMAGGYSVLKDAYKTTVFDLCRWRNENVPSLGEAFGPEGPVMPDRVITKPPSAELRDNQ 471 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 D++SLPPY +LD I+ +VE E S + ++ +TV +E LLY +EYKRRQ+P G Sbjct: 472 KDEDSLPPYEVLDPILYGLVEEELSVEQLVARGFDKDTVARIERLLYVAEYKRRQSPPGV 531 Query: 537 KITAKSFGRDRLYPISNKFR 556 K+ ++FGRDR YPI+N FR Sbjct: 532 KLGMRNFGRDRRYPITNAFR 551 >gi|91976537|ref|YP_569196.1| NAD synthetase [Rhodopseudomonas palustris BisB5] gi|91682993|gb|ABE39295.1| NH(3)-dependent NAD(+) synthetase [Rhodopseudomonas palustris BisB5] Length = 585 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 275/561 (49%), Positives = 371/561 (66%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L I++AQLNP VGDIAGN A AR AR +A +G +L++F ELFISGYPPEDLV K +F Sbjct: 7 RLTISLAQLNPTVGDIAGNAAMARAARAQAAAEGAELVVFPELFISGYPPEDLVLKPAFQ 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +A++ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 67 TACRAAVEDLARETADGGPAMLIGSPWLDGGKLYNACALLDGGRIAAIRTKVNLPNYGVF 126 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASP 178 EKR F G + P+ R +R+G+ ICED W N+ + L + GAE L N SP Sbjct: 127 DEKRVFSRGPVSGPMTIRGVRVGVPICEDTWLEESEDYENVVECLAETGAEILIVPNGSP 186 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ F+E Sbjct: 187 YARGKSDLRLSVQVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLPAFAE 246 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 W + + + L +E DY ACVL LRDYV+KN F V++G Sbjct: 247 SITTLHWQKGASGWRCD-------GPVAPTLDGDEGDYAACVLGLRDYVRKNGFPGVLLG 299 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG + V+ +MLP++YT+ SL+DA A+ALG Y+VLPI Sbjct: 300 ISGGIDSALCAAIAVDALGADKVRGVMLPFRYTAQISLDDADGLARALGFGYEVLPIAAA 359 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 VN F ++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 360 VNGFEDILAKPFAGLERDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 419 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKT+VF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 420 YGDMNGGFNPIKDIYKTEVFRLSSLRNRWKPDGALGPDGEVIPESIIVRPPTAELRENQT 479 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE EE + ++ +TV ++ LL +EYKRRQA G K Sbjct: 480 DQDSLPPYEVLDAILERLVEREEPLATIVAEGFDRDTVVRIDRLLNIAEYKRRQAAPGVK 539 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 540 VTRKNFGRDRRYPITNRFRDK 560 >gi|157364390|ref|YP_001471157.1| NAD+ synthetase [Thermotoga lettingae TMO] gi|157314994|gb|ABV34093.1| NAD+ synthetase [Thermotoga lettingae TMO] Length = 582 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 234/587 (39%), Positives = 326/587 (55%), Gaps = 40/587 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++ +AQ+N VGDI GN+ K E A + +D++ F EL I+GYPPEDL+FK+ Sbjct: 1 MNTLRVGLAQINSTVGDIEGNVEKILEKLELAQQFSVDVVAFPELVITGYPPEDLLFKRH 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI A++ + VVGF ++ + + N+ +L+ G+I+AV K LPNY Sbjct: 61 FIDQNKKALEKIAKYVPKSMIA-VVGFVDENSD-IFNAAAVLNNGSIVAVYRKNYLPNYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F G I F + R+G+ ICEDIW + G A L ++++SPY+ Sbjct: 119 VFDEFRYFQHGDKALVISFCNARIGVTICEDIWYPGGPARIEALLGDAHLLLNISSSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL + ++ + + I YVN VGGQDELIFDGAS + Q ++ + K F E Sbjct: 179 SGKLSWKERMLAVRANDNLAAIAYVNLVGGQDELIFDGASLIVNEQGEIISRAKQFEEDF 238 Query: 241 FMTEWH---------YDQQLSQWNYMS--------------------DDSASTMYIPLQE 271 + + +D + Q + D S + PL Sbjct: 239 LIGDIDLVGIERSRLHDPRRRQDKRVWSQEIAKLNIVNIPFEPIENKPDIKSRIENPLPR 298 Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 Y+A VL RDY++KN V+IGLSGGIDSAL IAVDALG ++V + +P Y+ Sbjct: 299 VAEVYHALVLGTRDYLKKNGIKNVVIGLSGGIDSALTCCIAVDALGPDHVTGVSMPGPYS 358 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 S SLEDA AK L +Y V+PI+++ F + + P + ENIQ+RIRG IL Sbjct: 359 STHSLEDAELLAKNLNIRYLVIPINEIYETFLKSLKPVFGDLPFDVAEENIQARIRGVIL 418 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 MALSN ++LTT NKSE S GY TLYGD +GGF LKD+YKT V++L+ + N Sbjct: 419 MALSNKFGWLVLTTGNKSESSTGYCTLYGDTAGGFAVLKDVYKTLVYELSEYVNQKAQ-- 476 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEY 510 E+IP + EK PSAELR Q DQ+ LPPYP+LD I+K VE++ S Y Sbjct: 477 -----KEIIPQRVFEKPPSAELRFGQVDQDKLPPYPLLDSILKAYVEDDRSVSEIVPAGY 531 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ TVR V ++ SEYKRRQ G KIT ++FG+DR PI+N+FR+ Sbjct: 532 DETTVRKVAWMVDSSEYKRRQLAPGPKITYRAFGKDRRLPITNQFRE 578 >gi|225850164|ref|YP_002730398.1| glutamine-dependent NAD+ synthetase [Persephonella marina EX-H1] gi|225645778|gb|ACO03964.1| glutamine-dependent NAD+ synthetase [Persephonella marina EX-H1] Length = 574 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 230/585 (39%), Positives = 327/585 (55%), Gaps = 41/585 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KKL++A+ QLN VGDI GN K A +EA D+I F EL I+GYPPEDL+ K S Sbjct: 1 MKKLRLALGQLNMTVGDIEGNTEKIISAIKEAKLHECDIIAFPELAITGYPPEDLLLKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI A++ + + +VGF + ++ + N+ +L G I+AV K LPNY Sbjct: 61 FINRNLQALNRIAQASE--NIITIVGFVDKVED-IYNAAAVLLNGKIVAVYHKNFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F G + ++G+ ICEDIW N +GAE + ++NASPY+ Sbjct: 118 VFDEVRYFQRGNEITLLNIEGYKIGLSICEDIWYPENPINIQAIEGAELIININASPYHI 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K K R +++ + + I YVN VGGQDEL+FDG S + + + F E+ Sbjct: 178 GKGKFREDMLKVRARDNLVSIAYVNLVGGQDELVFDGNSIIVGPDGSVLTKGRSFEEEIV 237 Query: 242 MTEWHYDQQLSQW----------------------------NYMSDDSASTMYIPLQEEE 273 + + + D Q + + E E Sbjct: 238 LCDINLDAIFRQQLKDNRLRNLRAMYKREEKVKEIHLDFKIKDKLETIPQKTILDRPEIE 297 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V +RDY+ KN F KV+IGLSGGIDS+L A IA DALGK+NV+ +++P ++TS Sbjct: 298 EIYKALVTGVRDYIHKNGFEKVVIGLSGGIDSSLTATIATDALGKDNVKGVLMPSQFTSK 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +S+EDA A+ LG + LPI D+ + + EN+Q+RIRGN+LMA Sbjct: 358 ESVEDALELAENLGIETFTLPITDIFEKYKDELKDIFAGLKPDATEENLQARIRGNLLMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN ++L T NKSE+SVGY TLYGDM GGF LKD+ KT+V++LA +RNS Sbjct: 418 LSNKFGWIVLATGNKSEMSVGYATLYGDMVGGFAVLKDVLKTKVYELAQYRNS------- 470 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYND 512 ++ VIP +LEK PSAEL+P Q D++ L PYPILD+II VE + + + ++ Sbjct: 471 --ISPVIPQRVLEKPPSAELKPDQRDEDELLPYPILDEIIMLYVEEDMPVQDIIRMGFDR 528 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +V V ++ +EYKRRQAP+G +IT ++FG+DR P++NKFR+ Sbjct: 529 HSVEKVVKMIDRNEYKRRQAPIGIRITHRAFGKDRRMPVTNKFRE 573 >gi|146277632|ref|YP_001167791.1| NAD synthetase [Rhodobacter sphaeroides ATCC 17025] gi|145555873|gb|ABP70486.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 554 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 248/559 (44%), Positives = 354/559 (63%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+A N+A AR+A E A G D++ TE+F++GY +DLV ++ Sbjct: 1 MTERFRLTLAQLNPTVGDLAANVALARKAWEAARAAGSDMVALTEMFVTGYQTQDLVMRR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ +AI+ L +D + G I +G P + + ++N +L+ G + A K +LPN Sbjct: 61 AFVRDAMAAIERLAADCAE-GPAIGIGGPCLEGDRLMNGYWLLEGGRVTATVFKHHLPNG 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W + ++C+ L + GAE L N SPY+ Sbjct: 120 EVFDEKRLFSSGEVHGPCRVGPLRIGIPICEDSW-HPDVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 179 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ + A + P EADY+A V+ LRDY+ K+ F +V++GLS Sbjct: 239 VHVDFE-----ATDEGWRALPAPIVAQPDL-WEADYHAMVVGLRDYLGKSGFSRVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AAIA DALG E V+ +MLP +YTS SLEDAAA A+ALGC+ D + I Sbjct: 293 GGIDSALVAAIAADALGPEAVRCVMLPSRYTSRHSLEDAAAVARALGCRLDEVGIEGPQE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + + GI ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AVGAALGPLFEGTAPGITEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYCTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNP+KDLYKT+VFQ+ WRN+H GP EVIPP +++K PSAELR Q D+ Sbjct: 413 DMNGGFNPIKDLYKTRVFQMCRWRNAHHRPWMKGPAGEVIPPRVIDKPPSAELREGQKDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD I++ +V+ EES + ++ ETV VE L++ SE+KR Q+ GT++T Sbjct: 473 DSLPPYATLDAILEGLVDREESAAELVARGFDRETVTKVERLIFLSEWKRFQSAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YP+ N++RD Sbjct: 533 RRAFWLDRRYPMVNRWRDE 551 >gi|90022198|ref|YP_528025.1| Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Saccharophagus degradans 2-40] gi|89951798|gb|ABD81813.1| NAD+ synthetase [Saccharophagus degradans 2-40] Length = 540 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 228/556 (41%), Positives = 324/556 (58%), Gaps = 20/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L IA+AQ+NP+VGDI GN A D+I+F EL ++GYPPEDL+ + S Sbjct: 1 MSTLNIALAQINPLVGDIDGNTQLIIDEA-LALANKHDVIVFPELTLTGYPPEDLLLRPS 59 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 AI + + A +VVG+P+++ + N +L G ++ K LPNY Sbjct: 60 IALRVDRAIQQILDS--NISAAVVVGYPKREGGKLFNMAGVLAQGQVLFEYAKQCLPNYQ 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F +G + LG+ ICEDIW + + L+ + +LNASP++ Sbjct: 118 VFDEKRYFEAGSKPGVFQLNGVNLGLSICEDIW-DGSPLDQLQSADVHAVLNLNASPFHQ 176 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++ + + PI+YVNQVGGQDEL+FDG S Q ++ + + F Sbjct: 177 EKQAEREALIAARAKKLGAPILYVNQVGGQDELVFDGGSMVATAQGEIVGRTELFKNACL 236 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 E AS P Y A V+ +RDYV KN F V++GLSG Sbjct: 237 SVELD------TATKQVSPQASKSGHPADPLADTYEALVVGVRDYVNKNRFKGVVLGLSG 290 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL AIAVDALGKE V+ +M+P+KYTS SL+ A A+ LG KY V+ I + + Sbjct: 291 GIDSALTLAIAVDALGKERVEAVMMPFKYTSQLSLDGAEDEARRLGVKYRVIHIEPMYDA 350 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F +++ + + ENIQ+R RG +LMALSN ++LTT NKSE++VGY TLYGD Sbjct: 351 FTQALNEAFEGQQKDTTEENIQARSRGVLLMALSNKLGYLVLTTGNKSEMAVGYATLYGD 410 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GG + LKD+ KTQVF L+ +RN+ L EVIPP+++++ PSAEL P Q D++ Sbjct: 411 MAGGLDVLKDVPKTQVFALSRYRNT---------LGEVIPPAVIDRPPSAELAPDQKDED 461 Query: 482 SLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY ILD I++ +E +ES + + ++ E V V L+ +EYKRRQAPVG +I+ Sbjct: 462 SLPPYEILDQILELYIEQDESAESIVAKGFDKEQVYRVLRLVDLNEYKRRQAPVGIRISK 521 Query: 541 KSFGRDRLYPISNKFR 556 ++FGRDR YPI+N ++ Sbjct: 522 RAFGRDRRYPITNGWK 537 >gi|326386431|ref|ZP_08208054.1| NAD synthetase [Novosphingobium nitrogenifigens DSM 19370] gi|326209092|gb|EGD59886.1| NAD synthetase [Novosphingobium nitrogenifigens DSM 19370] Length = 555 Score = 614 bits (1585), Expect = e-173, Method: Composition-based stats. Identities = 256/558 (45%), Positives = 342/558 (61%), Gaps = 7/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL I +AQLN VGD+A N R+ A DLI+F E+ + GYPPEDL+ K Sbjct: 1 MADKLIITLAQLNQNVGDLAANAESVRKV--RAAAMHSDLIVFPEMHLIGYPPEDLIQKP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + I+ + + L T DGG ++VG + N V +L+ G I AVR K LPNY Sbjct: 59 ALIERAAHEMQELAKLTADGGPALLVGSVFVRDGALHNGVALLEGGRIAAVRFKYELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F+ G +P++F+ LG+ ICEDIW + ++C+HL + GAE +N SPY Sbjct: 119 GTFDEKRYFLPGPLPEPVLFKGAMLGLPICEDIW-HPDVCRHLAQLGAEIFICVNGSPYE 177 Query: 181 HNKLKKRHE-IVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +K R + + + +P+ Y+N+VGGQDE++FDGASF + L Q + E Sbjct: 178 IDKDVLRIDGVAKRRAIDTGIPLAYLNRVGGQDEIVFDGASFVVGPEGALWIQAPDWEEA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 TEW+ + + + A ++ P + E Y A VL+LRDYV KN F V++GL Sbjct: 238 VIHTEWNRVKVGNGHRWRCQ--AGDVHEPTEHPEDIYCAMVLALRDYVNKNRFPGVVLGL 295 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ AAIAVDALG E V +MLP +YTS +SL+DA CA+ LG + D +PI V Sbjct: 296 SGGIDSAITAAIAVDALGPERVWCVMLPSRYTSQESLDDAEGCARMLGVRLDTIPIEPAV 355 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + F +++ + + EN+QSRIRG LMALSN MLLTT NKSE+SVGY T+Y Sbjct: 356 DGFAEMLAPVFADRKPDLTEENLQSRIRGTTLMALSNKFGPMLLTTGNKSEMSVGYATIY 415 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NPLKD YKT VF ++ WRN GLGP V+P IL K PSAELRP Q D Sbjct: 416 GDMNGGYNPLKDAYKTTVFAISEWRNRARPKIGLGPDGPVMPERILTKPPSAELRPDQKD 475 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLP YP+LD I+ +VE E S + Y+ TV +E LL+ +EYKRRQAP G K+ Sbjct: 476 SDSLPDYPVLDAILMDLVEQERSVDQIVAEGYDRATVERIERLLHIAEYKRRQAPPGVKL 535 Query: 539 TAKSFGRDRLYPISNKFR 556 ++FGRDR YPI++ FR Sbjct: 536 GMRNFGRDRRYPITHAFR 553 >gi|71906925|ref|YP_284512.1| NAD synthetase [Dechloromonas aromatica RCB] gi|71846546|gb|AAZ46042.1| NH(3)-dependent NAD(+) synthetase [Dechloromonas aromatica RCB] Length = 538 Score = 614 bits (1584), Expect = e-173, Method: Composition-based stats. Identities = 228/555 (41%), Positives = 329/555 (59%), Gaps = 20/555 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IA+AQ N VGD+ GN+ + + EA +G ++L EL + GYPPEDL+ + F + Sbjct: 2 LRIAVAQFNATVGDLTGNVERIIKCASEAKVRGAQVLLTPELALCGYPPEDLLLRPDFYR 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+D L + G +VVG P + + N+ +++ G AV K+ LPNY F Sbjct: 62 ACQRALDNLV--SRVEGIAVVVGHPEEHEGRCYNAATVIENGRSKAVYRKMRLPNYEVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + +R GI IC DIW+ + + + GAE L LNASP + K Sbjct: 120 EKRYFEPGTEACVVTLAGVRCGINICADIWE-AGAAELAHEAGAELLLVLNASPCHLEKH 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R +++ +I +P +Y N VGGQDEL+FDGASF D ++ ++ F E + + Sbjct: 179 QQRIQVLGDRIDATGIPAVYCNLVGGQDELVFDGASFALDARKNCCMRLPQFEEALGIVD 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + SDD A + + + Y A V+ +RDY+ K F IIGLSGGID Sbjct: 239 FD------AGRLHSDDMADELSLEAEA----YKALVVGVRDYIGKTGFKGAIIGLSGGID 288 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL +AVDALG + V+ +M+P YT+ SL+D+ + LG +YD + I + + + Sbjct: 289 SALTLCVAVDALGADKVRAVMMPSPYTAQMSLDDSREMIRVLGVQYDEIAIAPAMEVYGA 348 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ P+ ENIQ+RIRGNILMALSN + A++LTT NKSE++VGY TLYGDM+G Sbjct: 349 MLDPLFAGLPADTTEENIQARIRGNILMALSNKTGALVLTTGNKSEMAVGYCTLYGDMAG 408 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF +KD+YKT V++L+ +RN+ L VIP +I+ + PSAEL+P QTDQ+SLP Sbjct: 409 GFAVIKDVYKTLVYRLSVYRNT------LCQGDPVIPENIIVRPPSAELKPDQTDQDSLP 462 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY ILD I++ +E + S + VR V LL +EYKRRQAP+G +IT + F Sbjct: 463 PYEILDAIVRAYMEEDRSPREIIAAGLQEADVRRVVRLLRIAEYKRRQAPIGIRITPRGF 522 Query: 544 GRDRLYPISNKFRDH 558 G+D YPI+N++ D Sbjct: 523 GKDWRYPITNRYADE 537 >gi|307293500|ref|ZP_07573344.1| NAD+ synthetase [Sphingobium chlorophenolicum L-1] gi|306879651|gb|EFN10868.1| NAD+ synthetase [Sphingobium chlorophenolicum L-1] Length = 553 Score = 614 bits (1583), Expect = e-173, Method: Composition-based stats. Identities = 252/560 (45%), Positives = 343/560 (61%), Gaps = 13/560 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL IA+AQ+ VGD+ N R A DLI++ EL + GYPPEDLV K Sbjct: 1 MTDKLVIALAQMTQSVGDLTANADAMLEWRGRAMD--ADLIVYPELQLIGYPPEDLVLKP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + + +D L T DGG ++VG Q + N V +L+ G + A+R K LPNY Sbjct: 59 ALVDRANHELDRLAQATADGGPAMLVGTVVASQGVLFNVVALLEGGAVTAIRQKRELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G PI FR +++G+ ICEDIW + HL+ +GAE L S N SP+ Sbjct: 119 GTFDEKRLFAPGPLPAPIDFRGVKIGVPICEDIWFPF-VTAHLRSEGAEILISPNGSPFE 177 Query: 181 HNKLKKRHEIVTG-QISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +K +R V G ++ LP++Y+N+VGGQDEL+FDGASF +G +A Q+ + E Sbjct: 178 VDKDDRRINAVAGTRVRETGLPLVYLNRVGGQDELVFDGASFVMNGDLSIAQQLPDWEEA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 +T W ++ QW + + ++ + YNA VL LRDYV KN F V++GL Sbjct: 238 LVLTTW--EKWEGQWVCLPGER----HVLDERPADIYNAMVLGLRDYVNKNRFPGVVLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AA+AVDALG + V +M+P ++TS +SL+DA CA+ LG +YD +PI V Sbjct: 292 SGGIDSALSAAVAVDALGADRVWCVMMPSRFTSQESLDDAVECARLLGVRYDSIPIEPAV 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F S+++ + ENIQSRIRG LM LSN MLLTT NKSE+SVGY T+Y Sbjct: 352 EAFDSMLANVFTGRQRDLTEENIQSRIRGVTLMGLSNKYGHMLLTTGNKSEMSVGYATIY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG--LGPLTEVIPPSILEKSPSAELRPHQ 477 GDM+GG++ LKD YKT VF L WRN + + G GP ++P ++ K PSAELR +Q Sbjct: 412 GDMAGGYSVLKDAYKTTVFDLCRWRNENVPSLGEAFGPKGPIMPDRVITKPPSAELRDNQ 471 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 D++SLPPY +LD I+ +VE E S + ++ +TV +E LLY +EYKRRQ+P G Sbjct: 472 KDEDSLPPYEVLDPILYGLVEEELSVEQLVARGFDKDTVARIERLLYVAEYKRRQSPPGV 531 Query: 537 KITAKSFGRDRLYPISNKFR 556 K+ ++FGRDR YPI+N FR Sbjct: 532 KLGMRNFGRDRRYPITNAFR 551 >gi|217077779|ref|YP_002335497.1| NAD synthetase [Thermosipho africanus TCF52B] gi|217037634|gb|ACJ76156.1| glutamine-dependent NAD+ synthetase [Thermosipho africanus TCF52B] Length = 576 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 221/581 (38%), Positives = 340/581 (58%), Gaps = 36/581 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ +AQLN +GD GN+ K A E A + ++F ELF++GYPPEDL+ + SF++ Sbjct: 3 IRTTVAQLNSTLGDFEGNMKKIISAIEIAENNNSEFLIFPELFLTGYPPEDLILRTSFLK 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + + + I++GF + + NS+ ++ G ++ K++LPNYS F Sbjct: 63 KNIEYLEKIINFSRGKNVIILLGFIDIEDDA-YNSLAVIRDGKLLGKYHKMHLPNYSVFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F SG I + +I++GI ICEDIW + GA+ + + +ASPY+H K Sbjct: 122 ENRYFKSGNEIVIINYNNIKIGINICEDIWSPLGPMFYQAINGAQLILNASASPYFHGKR 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + R ++ + H PI+Y N VGGQDE++FDG S ++ F+ K F E+ F + Sbjct: 182 ELRKNYLSKKSYDHHCPIVYCNMVGGQDEVVFDGGSVVTSSDGKIIFEGKPFEEEIFTID 241 Query: 245 WH---------YDQQLSQWNYMSDDSASTMYI---------PLQEEEADY---------N 277 +D + N ++D + +++ P+ + +Y Sbjct: 242 IPIEDNLRTNLHDPRRRYINIVNDKPINYIFVKSENINKLKPINYKNKNYTLTKEEEIFR 301 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A L L+DY+QKN F KV+IGLSGG+DS+L AAIAV+ALG +NV I++P Y+S S+E Sbjct: 302 AITLGLKDYIQKNGFKKVLIGLSGGMDSSLVAAIAVEALGNKNVVGILMPSMYSSSHSIE 361 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 DA A+ L +Y ++ I D+ F + + + I EN+Q+RIRG +LMA+SN Sbjct: 362 DAKKLAENLEIEYHIIKISDIYYSFKNSLKDIFKGTSEDITEENLQARIRGTLLMAVSNK 421 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 ++L T NKSEI+ GY TLYGDM GGF+P+KD+YKT V+++A W N Sbjct: 422 FGYIVLATGNKSEIATGYSTLYGDMVGGFSPIKDIYKTDVYKIARWYNKFKG-------K 474 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVR 516 E+IP ++ K PSAELRP Q DQ++LPPY ILD+I+K +E E S ++ ++ +TV+ Sbjct: 475 EIIPENVFIKPPSAELRPDQKDQDTLPPYEILDEILKMYIEKELSVDEIINKGFDKDTVK 534 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 YV L+ +EYKRRQ +G K++ +SFG+DR PI+NK+R+ Sbjct: 535 YVAKLVDRNEYKRRQGVIGVKVSERSFGKDRRMPITNKYRE 575 >gi|316934840|ref|YP_004109822.1| NAD+ synthetase [Rhodopseudomonas palustris DX-1] gi|315602554|gb|ADU45089.1| NAD+ synthetase [Rhodopseudomonas palustris DX-1] Length = 585 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 276/561 (49%), Positives = 371/561 (66%), Gaps = 13/561 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L I++AQLNP+VGDIAGN KAR AR +A G DLI++ ELFI+GYPPEDLV K +F Sbjct: 7 RLTISLAQLNPMVGDIAGNADKARAARRQAAADGADLIVYPELFIAGYPPEDLVLKPAFQ 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 AC +AI+ L +T DGG +++G P D + N+ +LD G I A+R K+NLPNY F Sbjct: 67 AACRAAIEELARETADGGPAMLIGSPWVDGGKLYNACALLDGGRIAALRFKVNLPNYGVF 126 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIW-----KNSNICKHLKKQGAEFLFSLNASP 178 EKR F G P+ R +R+G+ ICED W + N+ + L + GAE L N SP Sbjct: 127 DEKRVFSRGPVAGPMTIRGVRIGVPICEDTWLEESDEYENVVECLAETGAEILIVPNGSP 186 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R + +++ LP++Y+NQVGGQDEL+FDGASF + + LA Q+ F E Sbjct: 187 YAGGKTDLRMSVSVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRTLAAQLPGFVE 246 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + + + + L+ +EADY ACVL LRDYV+KN F V++G Sbjct: 247 SITTLSFVRGAAGWRCD-------GPVAPVLEGDEADYAACVLGLRDYVRKNGFPGVLLG 299 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSALCAAIAVDALG V+ +MLP++YT+ SL+DA A ALG Y+VLPI Sbjct: 300 ISGGIDSALCAAIAVDALGAGKVRGVMLPFRYTAQVSLDDAGRLAGALGFGYEVLPIAQA 359 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F +++++ I EN+Q+R RG +LMA+SN + AM++TT NKSE+SVGY TL Sbjct: 360 VEGFEAILAKPFAGLARDITEENLQARTRGTLLMAISNKTGAMVVTTGNKSEMSVGYATL 419 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GGFNP+KD+YKTQVF+L+S RN LGP EVIP SI+ + P+AELR +QT Sbjct: 420 YGDMNGGFNPIKDIYKTQVFRLSSLRNRWKPDDALGPDGEVIPESIIIRPPTAELRENQT 479 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLPPY +LD I++R+VE EE + + ++ +TV ++ LL +EYKRRQA G K Sbjct: 480 DQDSLPPYDVLDAILQRLVEREEPLASIVAEGFDKDTVVRIDRLLNIAEYKRRQAAPGVK 539 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T K+FGRDR YPI+N+FRD Sbjct: 540 VTRKNFGRDRRYPITNRFRDK 560 >gi|289432851|ref|YP_003462724.1| NAD+ synthetase [Dehalococcoides sp. GT] gi|288946571|gb|ADC74268.1| NAD+ synthetase [Dehalococcoides sp. GT] Length = 566 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 226/572 (39%), Positives = 326/572 (56%), Gaps = 28/572 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A ++A G D+I F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIVSHVQKARSLGADVIAFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ A+D + + G ++VG+ +G+ N+ I+ G++I KI LPNY Sbjct: 61 FVEENLQALDAVIKASQ--GITVIVGYVDSH-DGLRNAAAIIHNGSLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +++G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFLPGNRCPVYTICGLQVGVNICEDIWFTSGPSTAQANKGAELIINISASPYHF 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSDRARENRVYIAYTNMVGGQDELVFDGASDVFDYNGNLLIRGKQFQEDLV 237 Query: 242 MTEWHYDQQLSQWNYMSDDSAST-----------------MYIPLQEEEADYNACVLSLR 284 + + Q + ++ S + PL+ + Y A +L R Sbjct: 238 VLDLDIPVLPRQADTNANVPDSIFVSSAGFETLKPPIENIAFTPLEADAEVYQALLLGTR 297 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F KV+IGLSGGIDS+L A IA DALG ENV +++P +Y+S S+ D+ A Sbjct: 298 DYINKNGFKKVVIGLSGGIDSSLVATIAADALGPENVVGVIMPSRYSSAGSISDSLHLAG 357 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG K +PI L F + +S + ENIQ+RIRGN+LMALSN ++L Sbjct: 358 NLGIKTLQIPIDPLFQSFLNTLSDVFAGTEANTTEENIQARIRGNLLMALSNKFHWLVLN 417 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNKSE ++GY TLYGDM+GGF +KD+ K V++LA RN ++IP ++ Sbjct: 418 TSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLAHNRNKLAGF-------DLIPDNV 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLY 523 L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S + + V+ V ++ Sbjct: 471 LTKPPSAELKPNQLDTDSLPPYEVLDPILEAYVEQDKSIDQIVALGFAADIVKRVVKMVD 530 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 531 RSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|94497814|ref|ZP_01304380.1| NAD+ synthetase [Sphingomonas sp. SKA58] gi|94422703|gb|EAT07738.1| NAD+ synthetase [Sphingomonas sp. SKA58] Length = 553 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 257/560 (45%), Positives = 343/560 (61%), Gaps = 13/560 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL IA+AQ+ VGD+ N A +G DLI+F EL + GYPPEDLV K Sbjct: 1 MTDKLVIALAQMTQSVGDLKANADAMLEW--RARAKGADLIVFPELQLIGYPPEDLVLKP 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + +D + +T DGG ++VG Q + N V +LD G + VR K LPNY Sbjct: 59 ALVTQADYQLDRMAQETADGGPAMLVGTVVAAQGVLFNVVALLDNGAVTTVRAKRELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G PI FR +++G+ ICEDIW + HL+ +GAE L S N SP+ Sbjct: 119 GTFDEKRLFAPGPLPAPIDFRGVKIGVPICEDIWFPF-VTAHLRSEGAEILISPNGSPFE 177 Query: 181 HNKLKKRHEIVTG-QISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 +K +R V G ++ LP+ Y+N+VGGQDEL+FDGASF + +A Q+ + E Sbjct: 178 VDKDDRRLNAVAGTRVRETGLPLAYLNRVGGQDELVFDGASFVMNADLSIAQQLPDWEEA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 +T+W ++ QW + D P YNA VL LRDYV +N F +++GL Sbjct: 238 LVLTQW--EKWDGQWVCLPGDRHELDPRPAD----IYNAMVLGLRDYVNRNRFPGIVLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AA+AVDALG + V +M+P ++TS SL+DA ACA+ LG +YD++PI V Sbjct: 292 SGGIDSALSAAVAVDALGADRVWCVMMPSRFTSQDSLDDAVACARLLGVRYDIIPIEPAV 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F +++ + EN+QSRIRG LMALSN MLLTT NKSE+SVGY T+Y Sbjct: 352 GAFDAMLGPVFDGRAPDLTEENLQSRIRGVTLMALSNKCGHMLLTTGNKSEMSVGYATIY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGIT--SGLGPLTEVIPPSILEKSPSAELRPHQ 477 GDM+GG++ LKD YKT VF L+ WRN+H + +G+GP V+P ++ K PSAELR Q Sbjct: 412 GDMAGGYSVLKDAYKTTVFDLSRWRNAHVPSLGAGMGPAGPVMPERVITKPPSAELRADQ 471 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 D +SLPPY ILD I+ +VE E S + + + ETV +E LLY +EYKRRQAP G Sbjct: 472 RDDDSLPPYEILDPILYGLVEEELSVDDLVARGFEKETVARIERLLYVAEYKRRQAPPGV 531 Query: 537 KITAKSFGRDRLYPISNKFR 556 K+ ++FGRDR YPI+N FR Sbjct: 532 KLGIRNFGRDRRYPITNAFR 551 >gi|165918537|ref|ZP_02218623.1| NAD+ synthetase [Coxiella burnetii RSA 334] gi|212212687|ref|YP_002303623.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii CbuG_Q212] gi|165917783|gb|EDR36387.1| NAD+ synthetase [Coxiella burnetii RSA 334] gi|212011097|gb|ACJ18478.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii CbuG_Q212] Length = 542 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 228/556 (41%), Positives = 324/556 (58%), Gaps = 20/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 +KKL I AQLN +VGDI GN A +A ++ DLILF EL I+ YPPEDL+F+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESKADLILFPELSITSYPPEDLLFRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + A+ T+ +VVG+P N ++ G I+A K LPNY Sbjct: 61 ALYRRVHQALQTIADKVK--NTTVVVGYPDFIDNKCYNKAAVITDGKIVATYAKHELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G I + +++GILICED+W N K GA+ + +NASP+ Sbjct: 119 RVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWL-ENPIKQSVAAGAQLIACINASPFA 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + E+ Sbjct: 178 QDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLKEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E+ D L+ + +EE YN VL +RDY+ KNNF +IGLS Sbjct: 238 ITVEFDIDDNLTILTKTP------LPPEPLDEEKIYNVLVLGVRDYINKNNFPGAVIGLS 291 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I + Sbjct: 292 GGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTMSIEDAEGEAKALNVRTSTINIQPIFE 351 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY TLYG Sbjct: 352 AFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKGAIVLTTGNKSEMAVGYATLYG 411 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q DQ Sbjct: 412 DMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQKDQ 462 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 + LPPY ILD+I++R + +E ++ E V+ V ++ +EYKRRQAP+G +IT Sbjct: 463 DVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGIRIT 522 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 523 ERAFGKDRRYPITSGF 538 >gi|75906642|ref|YP_320938.1| NAD synthetase [Anabaena variabilis ATCC 29413] gi|75700367|gb|ABA20043.1| NH(3)-dependent NAD(+) synthetase [Anabaena variabilis ATCC 29413] Length = 566 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 220/569 (38%), Positives = 320/569 (56%), Gaps = 34/569 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP++GD+ GN K ++A ++G L+L EL + GYPP DL+ F++ Sbjct: 1 MKIAIAQINPIIGDLTGNAQKILEMAQQAIKKGARLLLTPELSLCGYPPRDLLLNPIFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 A S + L D ++VG + + + NS +L+ G + + K L Sbjct: 61 AMSVTLQQLARDLP-VNLAVLVGTVELNCQAHTTGGKPLFNSTALLENGKVKQMFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQG 167 P Y F E R F +G + +I +G+ ICED+W + N L G Sbjct: 120 PTYDVFDEHRYFEAGQQANYFALDNINIGVTICEDLWNDEEFWGKRSYTANPISDLAILG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K R ++ P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDLIVNLSASPYSLGKQSFREAMLRHSAVRFQQPVIYANQVGGNDDLIFDGRSFALNRQG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + K F+ ++ Q+ Q + ++ I E+E + A VL +RDY Sbjct: 240 EVMCRAKGFASDLITVDFDESQRDLQLSSVAP-------IYESEDEEIWQALVLGVRDYA 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 QK F +V++GLSGGIDSAL A IA +ALGKENV +++P Y+S S+ DA A A LG Sbjct: 293 QKCRFSQVVLGLSGGIDSALVATIATEALGKENVFGVLMPSPYSSEHSISDALALADNLG 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K +LPI DL+ F + + G+ ENIQSRIRGN+LMA++N +LL+T N Sbjct: 353 IKTQILPIGDLMQSFDHSLVELFAGTEFGLAEENIQSRIRGNLLMAIANKFGYLLLSTGN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V+ L W NSH + VIP +IL K Sbjct: 413 KSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCKWLNSHQ--------SPVIPENILTK 464 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSE 526 +PSAEL+P Q DQ+SLPPY ILDDI++R++ N +S ++ V V ++ +E Sbjct: 465 APSAELKPGQVDQDSLPPYEILDDILQRLIHNHQSVGEIVAAGHDPMVVDKVIQMVARAE 524 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G KIT ++FG PI++ + Sbjct: 525 FKRRQAPPGLKITDRAFGTGWRMPIASNW 553 >gi|163743987|ref|ZP_02151356.1| NAD synthetase [Phaeobacter gallaeciensis 2.10] gi|161382747|gb|EDQ07147.1| NAD synthetase [Phaeobacter gallaeciensis 2.10] Length = 552 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 244/559 (43%), Positives = 338/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN KAR A G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRVTLAQLNPTVGDLAGNANKAREAWAAGRDAGADLVALPEMFITGYNTQDLVQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA + ++ L +D D G + VG P + N+ +IL G I K +LPN Sbjct: 61 VFHQAAIAEVERLAADCAD-GPALAVGSPWVADGKLFNAYLILKGGKITTQVLKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W ++ + L + GAEFL N SPY+ Sbjct: 120 TVFDEVRIFDAGPLGGPYAVGNTRIGSPICEDGW-YEDVAETLAETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK+ R + + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMDVRFNHMVARAVETDLPVIYLNMVGGQDDQVFDGGSFVLNPGGALALQMPVFDEAI 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 H D + + + + D A E E DY+ LSLRDY++K F KV++GLS Sbjct: 239 Q----HLDLERTAEGWRAVDGAKASLP--DEWEQDYHVMTLSLRDYMRKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ A IAVDALG ENV+ +MLP +YTS +SL+DA A AKALG YD +PI + Sbjct: 293 GGVDSAIVATIAVDALGAENVRCVMLPSEYTSQESLDDAEAVAKALGVHYDYVPIAEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ G+ ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFAGLDEGLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI P++++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPEGEVIRPNVIDKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD +++ +V+ + S + ++ E + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDALLEILVDRDGSIADCVAAGFSRENAKRVEHLIYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 533 PRAFWLDRRYPIVNRWRDP 551 >gi|147669591|ref|YP_001214409.1| NH(3)-dependent NAD(+) synthetase [Dehalococcoides sp. BAV1] gi|146270539|gb|ABQ17531.1| NH(3)-dependent NAD(+) synthetase [Dehalococcoides sp. BAV1] Length = 566 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 226/572 (39%), Positives = 326/572 (56%), Gaps = 28/572 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A ++A G D+I F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIVSHVQKARSLGADVIAFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ A+D + + G ++VG+ +G+ N+ I+ G++I KI LPNY Sbjct: 61 FVEENLQALDAVIKASQ--GITVIVGYVDSH-DGLRNAAAIIHNGSLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +++G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFLPGNRCPVYTICGLQVGVNICEDIWFTSGPSTAQANKGAELIINISASPYHF 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSDRARENRVYIAYTNMVGGQDELVFDGASDVFDYNGNLLIRGKQFQEDLV 237 Query: 242 MTEWHYDQQLSQWNYMSDDSAST-----------------MYIPLQEEEADYNACVLSLR 284 + + Q + ++ S + PL+ + Y A +L R Sbjct: 238 VLDLDIPVLPRQADTNANVPDSIFVSSAGFETLKPPIENIAFTPLEADAEVYQALLLGTR 297 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F KV+IGLSGGIDS+L A IA DALG ENV +++P +Y+S S+ D+ A Sbjct: 298 DYINKNGFKKVVIGLSGGIDSSLVATIAADALGPENVVGVIMPSRYSSAGSISDSLHLAG 357 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG K +PI L F + +S + ENIQ+RIRGN+LMALSN ++L Sbjct: 358 NLGIKTLQIPIDPLFQSFLNTLSDVFAGTEANTTEENIQARIRGNLLMALSNKFHWLVLN 417 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNKSE ++GY TLYGDM+GGF +KD+ K V++LA RN ++IP ++ Sbjct: 418 TSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLAHNRNRLAGF-------DLIPDNV 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLY 523 L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S + + V+ V ++ Sbjct: 471 LTKPPSAELKPNQLDTDSLPPYEVLDPILEAYVEQDKSIDQIVALGFAADIVKRVVKMVD 530 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 531 RSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|237748647|ref|ZP_04579127.1| NAD+ synthase [Oxalobacter formigenes OXCC13] gi|229380009|gb|EEO30100.1| NAD+ synthase [Oxalobacter formigenes OXCC13] Length = 537 Score = 613 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 224/554 (40%), Positives = 316/554 (57%), Gaps = 22/554 (3%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K+AIAQ+N VGD++GN + +A G D++L EL ++GYPPEDL+ + SF + Sbjct: 4 KVAIAQINSTVGDLSGNRERIAEFVRKAAALGADIVLTPELSLTGYPPEDLLLQHSFHSS 63 Query: 66 CSSAIDTLKSDTHDGG-AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D LK++ D ++VG N+ IL G II K LPNY+ F Sbjct: 64 TQLELDRLKNELADLDNVFVLVGHHLIKGGLCYNACSILVNGTIIGTYFKQELPNYTVFD 123 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + + GI ICED+W + + GA+ + +N+SPY+ K+ Sbjct: 124 EKRYFAPGNEPLVFKVKGVCFGIGICEDVWFPLPP-QKARAAGADVMLVMNSSPYHMGKM 182 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +R IV + + IY N VGGQDEL+FDG SF + ++ Q+K E + Sbjct: 183 HQRPVIVRQNVIGQGMSAIYANLVGGQDELVFDGCSFAMNTDGKVCVQLKQCEEDLEIVS 242 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + P E Y A VL +RDYV KN F VIIGLSGG+D Sbjct: 243 FD---------NKQPVNGRMEEHPTVE-SEVYRALVLGVRDYVTKNGFPGVIIGLSGGVD 292 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG E V+ +M+P YTS S DA+ A L YD +PI D + F S Sbjct: 293 SALVLAIAVDALGPEKVRAVMMPSPYTSDISQIDASDMAGRLKVAYDEIPISDCFSSFLS 352 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + P EN+Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM+G Sbjct: 353 TLAPQFNKLPEDSTEENLQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAG 412 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF +KD+YKT V++L +RNS +++VIP +L ++P+AEL+P+Q DQ++LP Sbjct: 413 GFAVIKDIYKTLVYRLCHYRNS---------ISDVIPERMLTRAPTAELKPNQFDQDTLP 463 Query: 485 PYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD I++ +E S + YN V + L+ +EYKRRQAP+G +IT + F Sbjct: 464 PYEVLDTIVRMFMEENRSVGEIVKNGYNTTVVERIVRLMRINEYKRRQAPIGIRITPRGF 523 Query: 544 GRDRLYPISNKFRD 557 GRD PI++K+RD Sbjct: 524 GRDWRCPITSKYRD 537 >gi|120553808|ref|YP_958159.1| NAD+ synthetase [Marinobacter aquaeolei VT8] gi|120323657|gb|ABM17972.1| DNA-directed RNA polymerase, subunit H [Marinobacter aquaeolei VT8] Length = 554 Score = 613 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 218/556 (39%), Positives = 323/556 (58%), Gaps = 21/556 (3%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKS 61 +KL++ +AQL+ +VGDI GN A + A D+++F EL ++GYPPEDL+ + S Sbjct: 15 RKLRVVMAQLDFLVGDIPGNTDLILEATQRAWAEHQADIVVFPELCLTGYPPEDLLLRPS 74 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A++ L+S +V+G P + + N+ ++++AG I K PNY Sbjct: 75 LDLRVREALEKLQSAA--LPPAMVIGAPIRSGGLLYNAALVIEAGQIRGRYFKRFPPNYQ 132 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F G + + +GI +CED+WK+ + GA + +LNASPY Sbjct: 133 VFDEKRYFAEGSDTLVLDIKGQPVGITVCEDLWKD-GPLEDAAAAGARLILNLNASPYDI 191 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 +K +R ++ + + I+YVN VGGQDEL+FDG S +D L+ ++ F E + Sbjct: 192 DKQARRKALLERKSRENRVSIVYVNLVGGQDELVFDGGSMAYDHSGGLSAEVPQFEEGLY 251 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 ++ + + YNA V +RDYV KN F V++GLSG Sbjct: 252 PVDFLCEHHCQPISRPLPPEPQLE-------ANVYNALVTGVRDYVNKNGFRSVVLGLSG 304 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+ A+AVDALGKE V+ +M+P++YTS SLEDA A A ALG +YDV I + + Sbjct: 305 GIDSAVTLAVAVDALGKERVRAVMMPFRYTSSISLEDAEAEATALGVQYDVFSIEPMYDA 364 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + +++ EN+Q+R+RG +LM+LSN +++LTT NKSE++VGY TLYGD Sbjct: 365 FMAALAEPFAGTKPDTTEENLQARLRGVLLMSLSNKFGSLVLTTGNKSEMAVGYSTLYGD 424 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF+ LKD+ KT VF+LA +RN+ L+ VIP ++ + PSAEL P Q D++ Sbjct: 425 MAGGFDVLKDVPKTLVFRLARYRNT---------LSPVIPERVITRPPSAELAPDQKDED 475 Query: 482 SLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLP Y +LD I+ VE + S + + E V V L+ +EYKRRQAP+G +IT Sbjct: 476 SLPGYDVLDQILNLYVERDYSADAIVAEGFEREDVDRVVRLVDINEYKRRQAPIGVRITE 535 Query: 541 KSFGRDRLYPISNKFR 556 + FG+DR YPI+N ++ Sbjct: 536 RGFGKDRRYPITNGWK 551 >gi|153209220|ref|ZP_01947286.1| NAD+ synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212218339|ref|YP_002305126.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii CbuK_Q154] gi|120575475|gb|EAX32099.1| NAD+ synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|212012601|gb|ACJ19981.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii CbuK_Q154] Length = 542 Score = 613 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 228/556 (41%), Positives = 324/556 (58%), Gaps = 20/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 +KKL I AQLN +VGDI GN A +A ++ DLILF EL I+ YPPEDL+F+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESKADLILFPELSITSYPPEDLLFRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + A+ T+ +VVG+P N ++ G I+A K LPNY Sbjct: 61 ALYRRVHQALQTIADKVK--NTTVVVGYPDFIDNKCYNKAAVITDGKIVATYAKHELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G I + +++GILICED+W N K GA+ + +NASP+ Sbjct: 119 RVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWL-ENPIKQSVAAGAQLIACINASPFA 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + E+ Sbjct: 178 QDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLKEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E+ D L+ + +EE YN VL +RDY+ KNNF +IGLS Sbjct: 238 ITVEFDIDDNLTILTKTP------LPPEPLDEEKIYNVLVLGVRDYINKNNFPGAVIGLS 291 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I + Sbjct: 292 GGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTISIEDAEGEAKALNVRTSTINIQPIFE 351 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY TLYG Sbjct: 352 AFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKGAIVLTTGNKSEMAVGYATLYG 411 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q DQ Sbjct: 412 DMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQKDQ 462 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 + LPPY ILD+I++R + +E ++ E V+ V ++ +EYKRRQAP+G +IT Sbjct: 463 DVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGIRIT 522 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 523 ERAFGKDRRYPITSGF 538 >gi|260431460|ref|ZP_05785431.1| glutamine-dependent NAD(+) synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260415288|gb|EEX08547.1| glutamine-dependent NAD(+) synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 570 Score = 613 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 250/559 (44%), Positives = 341/559 (61%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I +AQLNP+VGDIAGN AKAR A E+ G DL+ E+FI+GY +DLV K Sbjct: 19 MADHFRITLAQLNPIVGDIAGNAAKARSAWEQGRAAGADLVALPEMFITGYNTQDLVQKP 78 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA A+ L +D D G + +G P + + + N+ +IL+ G I++ K +LPN Sbjct: 79 VFHQAAMDAVRQLATDCAD-GPALAIGGPWAEGDKLYNAYLILNQGRIVSKVFKHHLPNE 137 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L + GAEFL N SPY+ Sbjct: 138 TVFDEVRLFDAGPLGGPYAVGNTRVGSPICEDGW-HEDVAETLAETGAEFLLIPNGSPYF 196 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R + ++ LP+IY+N VGGQD+ +FDG SF + LAF+M F E Sbjct: 197 RNKYDIRLNQMVARVVETGLPVIYLNMVGGQDDQVFDGGSFGLNPGGALAFRMPVFDEA- 255 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T + W + A E DY A V +LRDY+ K F K ++GLS Sbjct: 256 -VTHVDLQRGEQGWTIVPGAVAEQP----DAWEQDYRAMVQALRDYMAKTGFSKALLGLS 310 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A IAVDALG ENV+ +MLP +YTS SLEDA A AKALG +YD +PI Sbjct: 311 GGVDSALVATIAVDALGAENVRCVMLPSEYTSAASLEDAEAVAKALGVQYDYVPISQSRA 370 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + I ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 371 AVTETLAPLFAGRRADITEENIQSRLRGLLLMAISNKFGEMLLTTGNKSEVAVGYATIYG 430 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ GP EVI PS+++K PSAELR Q D Sbjct: 431 DMNGGYNPIKDLYKTRVFETCRWRNANHRDWMKGPAGEVIRPSVIDKPPSAELREDQKDS 490 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I++ +V+ + S + +++ R VEHL+Y SEYKR Q+ GT++T Sbjct: 491 DSLPDYPVLDGILEILVDRDGSIADCVAAGFDEADARRVEHLIYISEYKRFQSAPGTRLT 550 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 551 NRAFWLDRRYPIVNRWRDR 569 >gi|119383605|ref|YP_914661.1| NAD synthetase [Paracoccus denitrificans PD1222] gi|119373372|gb|ABL68965.1| NH(3)-dependent NAD(+) synthetase [Paracoccus denitrificans PD1222] Length = 556 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 247/564 (43%), Positives = 332/564 (58%), Gaps = 13/564 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I + QLNP VGD+ GN A AR A +A G +L+ E+FI+GY +DLV K Sbjct: 1 MTDTFRITLGQLNPTVGDLPGNAAMAREAWAKAREAGANLLALPEMFITGYQTQDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q + I L D D G I +G P +++ + N+ IL+ G + A K LP+ Sbjct: 61 GFTQEAMAHIVDLARDCAD-GPAIGIGGPYAEEDRLYNAYWILNGGRVAARVRKHELPHK 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G + P +R+G ICED W +C+ L + GAE L N SPY+ Sbjct: 120 QLFDEWRLFNVGPISGPYSLDGLRIGSPICEDAWWP-EVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF----DGQQQLAFQMKHF 236 NKL R + ++ LP+IY+N VGGQD+ I+DGASF DG Q+ F Sbjct: 179 RNKLDLRMGHMVARVVETGLPLIYLNSVGGQDDQIYDGASFVLNPGEDGGVVKVMQLAPF 238 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E ++ Q + + M E E DY A L LRDY++K+ F KV+ Sbjct: 239 DEMLAHVDFTRTPQGWRA------APGRMDHQPDEWEQDYRAMTLGLRDYMRKSGFRKVV 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL A IA DA+G ENV+ +MLP +YTS SL+DAA CA LG + D + I Sbjct: 293 LGLSGGIDSALVATIASDAVGPENVRCVMLPSEYTSQASLDDAADCAGRLGTRLDTVHIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + ++ + ENIQSR+RG +LMALSN +LLTT NKSE++VGY Sbjct: 353 GARDAVGDALAHLMAGTQPDATEENIQSRLRGVMLMALSNKFGELLLTTGNKSEVAVGYA 412 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NP+KDLYKT+VFQ WRN + LG EVIPP I+ K PSAELRP+ Sbjct: 413 TIYGDMAGGYNPIKDLYKTRVFQTCRWRNENHRDWMLGRAGEVIPPQIISKPPSAELRPN 472 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q DQ+SLPPY +LD I++ +VE + + + Q + ETV+ VE LLYGSE+KR QA G Sbjct: 473 QKDQDSLPPYEVLDAILEGLVEKDLALKDLVAQGFEPETVKKVETLLYGSEWKRYQAAPG 532 Query: 536 TKITAKSFGRDRLYPISNKFRDHI 559 +I+ K+F DR YP+ N++RD + Sbjct: 533 PRISTKAFWLDRRYPLVNRWRDRL 556 >gi|163736854|ref|ZP_02144272.1| NAD+ synthetase [Phaeobacter gallaeciensis BS107] gi|161389458|gb|EDQ13809.1| NAD+ synthetase [Phaeobacter gallaeciensis BS107] Length = 552 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 243/559 (43%), Positives = 336/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN KAR A G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRVTLAQLNPTVGDLAGNANKAREAWAAGRDAGADLVALPEMFITGYNTQDLVQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA + ++ L +D D G + VG P + N+ +IL G I K +LPN Sbjct: 61 VFHQAAIAEVERLAADCAD-GPALAVGSPWVADGKLFNAYLILKGGKITTQVLKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W ++ + L + GAEFL N SPY+ Sbjct: 120 TVFDEVRIFDAGPLGGPYAVGNTRIGSPICEDGW-YEDVAETLAETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK+ R + + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMDVRFNHMVARAVETDLPVIYLNMVGGQDDQVFDGGSFVLNPGGALALQMPVFDEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ W + AS E E DY+ LSLRDY++K F KV++GLS Sbjct: 238 -IQHLDLERTAEGWRAVEGPKASLP----DEWEQDYHVMTLSLRDYMRKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ A IAVDALG ENV+ +MLP +YTS +SL+DA A AKALG YD +PI + Sbjct: 293 GGVDSAIVATIAVDALGAENVRCVMLPSEYTSQESLDDAEAVAKALGVHYDYVPIAEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ G+ ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFAGLDEGLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN + +GP EVI P++++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNDNHRDWMMGPEGEVIRPNVIDKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD +++ +V+ + S + ++ E + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDALLEILVDRDGSIADCVAAGFSRENAKRVEHLIYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 533 PRAFWLDRRYPIVNRWRDP 551 >gi|154706227|ref|YP_001424305.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii Dugway 5J108-111] gi|154355513|gb|ABS76975.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii Dugway 5J108-111] Length = 542 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 228/556 (41%), Positives = 324/556 (58%), Gaps = 20/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 +KKL I AQLN +VGDI GN A +A ++ DLILF EL I+ YPPEDL+F+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESKADLILFPELSITSYPPEDLLFRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + A+ T+ +VVG+P N ++ G I+A K LPNY Sbjct: 61 ALYRRVHQALQTIADKVK--NTTVVVGYPDFIDNKCYNKAAVIADGKIVATYAKHELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G I + +++GILICED+W N K GA+ + +NASP+ Sbjct: 119 RVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWL-ENPIKQSVAAGAQLIACINASPFA 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + E+ Sbjct: 178 QDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLKEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E+ D L+ + +EE YN VL +RDY+ KNNF +IGLS Sbjct: 238 ITVEFDIDDNLTILTKTP------LPPEPLDEEKIYNVLVLGVRDYINKNNFPGAVIGLS 291 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I + Sbjct: 292 GGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTMSIEDAEGKAKALNVRTSTINIQPIFE 351 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY TLYG Sbjct: 352 AFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKGAIVLTTGNKSEMAVGYATLYG 411 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q DQ Sbjct: 412 DMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQKDQ 462 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 + LPPY ILD+I++R + +E ++ E V+ V ++ +EYKRRQAP+G +IT Sbjct: 463 DVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGIRIT 522 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 523 ERAFGKDRRYPITSGF 538 >gi|332970488|gb|EGK09478.1| NAD synthetase [Psychrobacter sp. 1501(2011)] Length = 557 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 232/555 (41%), Positives = 328/555 (59%), Gaps = 19/555 (3%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K LK A+AQ + +VGDI NI K R EA G ++I+F EL + GYPPEDL+ + S Sbjct: 17 KSLKFALAQSHFMVGDIQTNIEKMRSLAIEARDNGANIIIFPELALLGYPPEDLLLRPSL 76 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +A+ +L +++G+P D G NS I+ G K LPNY Sbjct: 77 SDRVKAALSSLNDI---NDIVMIIGYPHVDYHGTFNSAAIIQNGQQKGFYHKQYLPNYGV 133 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E+R F G + ++ I +G+LICED+W++ K LK QGA+ + ++NASP+ Sbjct: 134 FDERRYFDKGRNQVLFDYQGITIGLLICEDLWQD-EPIKALKDQGADLVVTINASPFEAG 192 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R +++ + + +LPI+YVN VGGQD+L+FDG S ++A + F E Sbjct: 193 KQHTRQALLSKRATDNNLPIVYVNAVGGQDDLVFDGGSMAVQANGKVAHEAPRFLEHMLY 252 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++ + D+ + + L E Y A V+ LRDYV + F VI+GLSGG Sbjct: 253 ANFNVESGQF-------DTQTKAPLQLSAESETYQALVVGLRDYVNHSGFEGVIVGLSGG 305 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL IAVDALG + V +M+PY+YTS SLEDA A A+ L Y V PIHD V+ Sbjct: 306 IDSALTLCIAVDALGSDKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIHDAVDGM 365 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + + ENIQ+R RG +LMALSN +++TT NKSE++VGY TLYGDM Sbjct: 366 RHTLAPLFSKAKADTTEENIQARARGMVLMALSNKFGHLVITTGNKSEMAVGYSTLYGDM 425 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF+ LKD+YKTQV+ LA++RN T+VIP ++ + PSAELRP Q DQ+S Sbjct: 426 AGGFDVLKDVYKTQVYALANYRNRL-------EDTDVIPERVITRPPSAELRPDQKDQDS 478 Query: 483 LPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LP Y ILD I+K ++N+ F + ++ +TVR ++ SEYKRRQA +GTKI+ K Sbjct: 479 LPDYDILDAILKDYIDNDLGFNEIVAKGFDPDTVRQTIRMVDRSEYKRRQAAIGTKISHK 538 Query: 542 SFGRDRLYPISNKFR 556 +FGR+R YP+ N + Sbjct: 539 AFGRERRYPLVNGWS 553 >gi|260428890|ref|ZP_05782867.1| glutamine-dependent NAD(+) synthetase [Citreicella sp. SE45] gi|260419513|gb|EEX12766.1| glutamine-dependent NAD(+) synthetase [Citreicella sp. SE45] Length = 552 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 244/559 (43%), Positives = 337/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ IAQLNPV+GD+AGN A+AR A E+ G D++ E+FI+GY P+DL K Sbjct: 1 MADRFRLTIAQLNPVLGDLAGNAAQARDAWEQGKAAGADMVALPEMFIAGYSPQDLPSKN 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F C +A+ L D D G + +G P + + N+ VI G I K +LPNY Sbjct: 61 AFTLDCMAAVRQLAEDCAD-GPTLAIGTPWVEGTELYNAYVICRGGKITTQVFKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R + SG P + R+G +CED W ++ + L + GAEFL N SPY+ Sbjct: 120 EVFDELRIYDSGPIGGPYAVGNTRVGSPVCEDAW-YEDVAETLAETGAEFLLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K + R + ++ LP+IYVN GGQD+ IFDG SF + Q+A Q+ F E Sbjct: 179 RDKYETRLNKMVARVIETGLPLIYVNMTGGQDDQIFDGGSFVLNPHGQVAVQLPVFEE-- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + S W + D Q+ YNA V++LRDY +K F KV++GLS Sbjct: 237 VVAHVDLGRTESGWRALEGDFTRHPDSMEQD----YNAMVVALRDYCRKTGFGKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A IAVDALG NV+ +MLP +YTS SLEDA ACA+ALGC YD +PI + Sbjct: 293 GGIDSALVATIAVDALGAGNVRCVMLPSEYTSEHSLEDAKACAEALGCHYDFVPITPGRD 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITATLAPLFEGLKPDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF + WRN++ GP IP I+ K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFDICRWRNANHRGWMSGPGAAPIPERIITKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I+K +V+++ S + Y+ + VEHLLY SEYKR Q+ G +++ Sbjct: 473 DSLPDYPVLDGILKILVDDDGSIADCVAAGYDRADAKKVEHLLYISEYKRFQSAPGARLS 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD+ Sbjct: 533 KRAFWLDRRYPIVNRWRDN 551 >gi|114762129|ref|ZP_01441597.1| NAD(+) synthase [Pelagibaca bermudensis HTCC2601] gi|114545153|gb|EAU48156.1| NAD(+) synthase [Roseovarius sp. HTCC2601] Length = 552 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 239/559 (42%), Positives = 339/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ IAQLNP +GD+AGN A+A+ A E+A G D++ E+FI+GY +DL K Sbjct: 1 MADRFRLTIAQLNPTMGDLAGNAAQAKDAWEQAKAAGADMVALPEMFIAGYNAQDLPMKH 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F C +A+ L D D G + +G P + + N+ +I G ++ K +LPNY Sbjct: 61 AFTLDCMAAVKALAEDCAD-GPSLGIGCPWVEGTELYNAYIICRGGKMVTQVFKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F SG P + R+G ICED W ++ + L + GAEFL N SPY+ Sbjct: 120 NVFDELRIFDSGPIGGPYAVGNTRIGSPICEDAW-YEDVAETLAETGAEFLLVPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK + R + ++ LP+IY+N VGGQD+ IFDG SF + +A Q+ F E Sbjct: 179 RNKYETRLNKMIARVVETGLPLIYLNMVGGQDDQIFDGGSFVLNPHGAVALQLPVFEEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ W + D + Q+ Y+A VL+LRDY +K F KV++G+S Sbjct: 238 -IAHVDLERTEDGWRALEGDFTTHPDAMEQD----YHAMVLALRDYCRKTGFGKVLLGMS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A IAVDALG ENV+ +MLP +YTS SLEDA ACA+ LGC YD +PI + Sbjct: 293 GGVDSALVATIAVDALGAENVRCVMLPSEYTSEHSLEDAKACAENLGCHYDFVPITPGRD 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITETLAPLFEGRDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DMSGG+NP+KDLYKT+VF + WRN++ +GP IP I+ K PSAELR Q D Sbjct: 413 DMSGGYNPIKDLYKTRVFDICRWRNANARPWMMGPEAAPIPERIITKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I++ +V+++ S + Y+ + VEHLLY SEYKR Q+ G +++ Sbjct: 473 DSLPDYPVLDGILQILVDDDGSIADCVAAGYDRADAKKVEHLLYISEYKRFQSAPGARLS 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 533 KRAFWLDRRYPIVNRWRDP 551 >gi|73748831|ref|YP_308070.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides sp. CBDB1] gi|73660547|emb|CAI83154.1| glutamine-dependent NAD(+) synthetase [Dehalococcoides sp. CBDB1] Length = 566 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 225/572 (39%), Positives = 325/572 (56%), Gaps = 28/572 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL++A+AQ++ VVGD+AGN A ++A G D+I F EL I GYPPEDL+ K Sbjct: 1 MGKLRLAMAQIDSVVGDLAGNTACIVSHVQKARSLGADVIAFPELAICGYPPEDLLHKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ A+D + + G ++VG+ +G+ N+ I+ G++I KI LPNY Sbjct: 61 FVEENLQALDAVIKASQ--GITVIVGYVDSH-DGLRNAAAIIHNGSLIDSYHKIFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F+ G +++G+ ICEDIW S +GAE + +++ASPY+ Sbjct: 118 VFDENRYFLPGNRCPVYTICGLQVGVNICEDIWFTSGPSTAQANKGAELIINISASPYHF 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++++ + + I Y N VGGQDEL+FDGAS FD L + K F E Sbjct: 178 GKRNQREKMLSDRARENRVYIAYTNMVGGQDELVFDGASDVFDYNGNLLIRGKQFQEDLV 237 Query: 242 MTEWHYDQQLSQWNYMSDDSAST-----------------MYIPLQEEEADYNACVLSLR 284 + + Q + ++ S + PL+ + Y A +L R Sbjct: 238 VLDLDIPVLPRQADTNANVPDSIFVSSAGFETLKPPIENIAFTPLEADAEVYQALLLGTR 297 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F KV+IGLSGGIDS+L A IA DALG ENV +++P +Y+S S+ D+ A Sbjct: 298 DYINKNGFKKVVIGLSGGIDSSLVATIAADALGPENVVGVIMPSRYSSEGSISDSLHLAG 357 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG K +PI L F + +S + ENIQ+RIRGN+LMALSN ++L Sbjct: 358 NLGIKTLQIPIDPLFQSFLNTLSDVFAGTEANTTEENIQARIRGNLLMALSNKFHWLVLN 417 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 TSNKSE ++GY TLYGDM+GGF +KD+ K V++L RN ++IP ++ Sbjct: 418 TSNKSETAIGYSTLYGDMAGGFAIIKDVPKVLVYRLVHNRNKLAGF-------DLIPNNV 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLY 523 L K PSAEL+P+Q D +SLPPY +LD I++ VE ++S + + V+ V ++ Sbjct: 471 LAKPPSAELKPNQLDTDSLPPYEVLDPILEAYVEQDKSIDQIVALGFAADIVKRVVKMVD 530 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 SEYKRRQAP G KIT K+FGRDR PI+N++ Sbjct: 531 RSEYKRRQAPPGIKITPKAFGRDRRLPITNRY 562 >gi|294635169|ref|ZP_06713677.1| NAD(+) synthase [Edwardsiella tarda ATCC 23685] gi|291091431|gb|EFE23992.1| NAD(+) synthase [Edwardsiella tarda ATCC 23685] Length = 540 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 233/556 (41%), Positives = 337/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + A + + G D+++F+EL + GYPPEDL+++ Sbjct: 1 MSRTLSIALAQLNLLVGDIEGNAERMLAAMAQQQQAGADIVMFSELALCGYPPEDLLYRD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C S ++ L+ + G ++VG P +++ + N++ + G + A K LPNY Sbjct: 61 DFHQRCQSQLERLRQAS--GSIAVIVGHPWREKGALYNALSLFADGQLQARYYKQRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + + + RLG+LICED+W + + GAE L ++NASPY Sbjct: 119 GVFDEMRYFSAGDTPCVVTLKGYRLGLLICEDVW-FNEPVDAVAAAGAEILLTINASPYN 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R+ ++ LP++Y+NQVGGQDEL+FDG S FD Q QL ++ F EQ Sbjct: 178 REKPYMRNTLLADHCRRTGLPLLYLNQVGGQDELVFDGCSKVFDAQGQLTHRLAAFDEQV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + S+ A Y A VL++RDYV KN F ++GLS Sbjct: 238 TQVQLVETRPQPMRDPASELPA---------LAQIYRALVLAVRDYVGKNGFQGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGKE VQ +M+P++YT+ S+ DA A+ +G ++D+L I + + Sbjct: 289 GGIDSALTLAIAVDALGKERVQALMMPFRYTADISVADAQEQAQTMGVEFDILSIEPMFD 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 AFMGQLAPLFAGTERDTTEENLQARCRGVVLMALSNKRRRLVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VFQLAS+RN+ L VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFQLASYRNT---------LGYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ VE ++S +++ VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDVLDAILQGYVEQDKSVAQLVADGFDEAVVRKVIRLVDINEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|254785219|ref|YP_003072647.1| glutamine-dependent NAD+ synthetase [Teredinibacter turnerae T7901] gi|237686319|gb|ACR13583.1| glutamine-dependent NAD+ synthetase [Teredinibacter turnerae T7901] Length = 542 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 220/556 (39%), Positives = 325/556 (58%), Gaps = 20/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKK 60 + L IA+AQ+NP+VGDI GN K R ++ Q D+++F EL ++GYPPEDL+ + Sbjct: 1 MTTLNIAMAQINPLVGDIDGNAKKILRVAQQLEREQHADIVVFPELTLTGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S + A++ L + + +V+G+P+ + N ++ G +I K LPNY Sbjct: 61 SCDRRVERALNWLCDQS--LASYVVIGYPKTIAGRMYNMAGVICGGRVICEYAKQALPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + + + +G+ ICEDIW I + + +GA+ L +LN SP+ Sbjct: 119 QVFDEKRYFSEGQESVTFDCKGVPVGLTICEDIWDGGPILR-ARAKGADLLLNLNGSPFD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R +V + S + +P++YVNQVGGQDEL+FDG SFC + ++ F E + Sbjct: 178 AEKHAERERLVAARASEIGIPVVYVNQVGGQDELVFDGGSFCANPGGEILRMAPMFREHS 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ + ++ + Y+A VL ++DYV KN F V++GLS Sbjct: 238 AVVAFNAQEGTLA------PVSNLQTLDDDPLAVTYDALVLGVKDYVNKNGFKGVVLGLS 291 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG + V +M+P++YTS S DA A+ LG Y + I + + Sbjct: 292 GGIDSALTLAIAVDALGADRVNAVMMPFRYTSDMSKTDAEEEARRLGVSYQSISIEPMYD 351 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ ENIQ+R RG +LMA+SN ++LTT NKSE++VGY TLYG Sbjct: 352 AFSAQLAGAFANTQRDTTEENIQARSRGVLLMAISNKLGYLVLTTGNKSEMAVGYATLYG 411 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG + LKD+ KT VF L+ +RN+ ++ VIP S++ + PSAEL P Q D+ Sbjct: 412 DMAGGLDVLKDVPKTLVFALSRYRNT---------VSAVIPESVITRPPSAELAPDQKDE 462 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I+ VE + S + YN + V V L+ +EYKRRQAPVG +I+ Sbjct: 463 DSLPPYEILDAILAMYVEQDLSAEAIIEAGYNRDDVMRVIRLIDINEYKRRQAPVGIRIS 522 Query: 540 AKSFGRDRLYPISNKF 555 A++FGRDR YPI+N + Sbjct: 523 ARAFGRDRRYPITNGW 538 >gi|148653679|ref|YP_001280772.1| NAD+ synthetase [Psychrobacter sp. PRwf-1] gi|148572763|gb|ABQ94822.1| NAD+ synthetase [Psychrobacter sp. PRwf-1] Length = 552 Score = 611 bits (1576), Expect = e-172, Method: Composition-based stats. Identities = 233/555 (41%), Positives = 323/555 (58%), Gaps = 19/555 (3%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 LK A+AQ + +VGDI NI K R EA G D+I+F EL + GYPPEDL+ + S Sbjct: 13 SSLKFAMAQSHFMVGDIQTNIDKMRSLAIEARDNGADVIVFPELALLGYPPEDLLLRPSL 72 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +A+ +L +++G+P D G NS I+ G K LPNY Sbjct: 73 SDRVKAALSSLSDI---NDIVMIIGYPHVDYHGTFNSAAIIQNGQQKGFYHKQYLPNYGV 129 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E+R F G + ++ + +G+LICED+W+ K LK QGA+ + ++NASP+ Sbjct: 130 FDERRYFDKGRNQVLFDYQGVTIGLLICEDLWQ-EEPIKALKDQGADLVVTINASPFEAG 188 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R ++ + + LPIIYVN VGGQD+L+FDG S +A + F E Sbjct: 189 KQHTRQALLNKRATDNQLPIIYVNAVGGQDDLVFDGGSMAIQANGDVAHEAPRFLEHMLY 248 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + + DS + + L E Y A V+ LRDYV + F VI+GLSGG Sbjct: 249 ATYDIKNH-------TFDSQTKAPLQLSSESETYQALVVGLRDYVNHSGFEGVIVGLSGG 301 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL +AVDALG + V +M+PY+YTS SLEDA A A+ L Y V PIHD V+ Sbjct: 302 IDSALTLCVAVDALGSDKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIHDAVDGM 361 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + + ENIQ+R RG +LMALSN +++TT NKSE++VGY TLYGDM Sbjct: 362 RHTLAPLFSKAKADTTEENIQARARGMVLMALSNKFGHLVITTGNKSEMAVGYATLYGDM 421 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF+ LKD+YKTQV+ LA++RN T+ VIP ++ + PSAELRP Q DQ+S Sbjct: 422 AGGFDVLKDVYKTQVYALANYRNRLEDTN-------VIPERVITRPPSAELRPDQVDQDS 474 Query: 483 LPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LP Y +LD I+K ++N+ F + ++ E VR+V L+ SEYKRRQA +GTKI+ K Sbjct: 475 LPDYDLLDAILKDYIDNDLGFNEITAKGFDPEVVRHVIKLVDRSEYKRRQAAIGTKISHK 534 Query: 542 SFGRDRLYPISNKFR 556 +FGR+R YP+ N + Sbjct: 535 AFGRERRYPLVNGWS 549 >gi|29654185|ref|NP_819877.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii RSA 493] gi|29541451|gb|AAO90391.1| glutamine-dependent NAD(+) synthetase [Coxiella burnetii RSA 493] Length = 542 Score = 611 bits (1575), Expect = e-172, Method: Composition-based stats. Identities = 228/556 (41%), Positives = 324/556 (58%), Gaps = 20/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 +KKL I AQLN +VGDI GN A +A ++ DLILF EL I+ YPPEDL+F+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESKADLILFPELSITSYPPEDLLFRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + A+ T+ +VVG+P N ++ G I+A K LPNY Sbjct: 61 ALYRRVHQALQTIADKVK--NTTVVVGYPDFIDNKCYNKAAVITDGKIVATYAKHELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G I + +++GILICED+W N K GA+ + +NASP+ Sbjct: 119 RVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWL-ENPIKQSVAAGAQLIACINASPFA 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + E+ Sbjct: 178 QDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLKEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E+ D L+ + +EE YN VL +RDY+ KNNF +IGLS Sbjct: 238 ITVEFDIDDNLTILTKTP------LPPEPLDEEKIYNVLVLGVRDYINKNNFPGAVIGLS 291 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I + Sbjct: 292 GGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTMSIEDAEGEAKALNVRTSTINIQPIFE 351 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY TLYG Sbjct: 352 AFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKDAIVLTTGNKSEMAVGYATLYG 411 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q DQ Sbjct: 412 DMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQKDQ 462 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 + LPPY ILD+I++R + +E ++ E V+ V ++ +EYKRRQAP+G +IT Sbjct: 463 DVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGIRIT 522 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 523 ERAFGKDRRYPITSGF 538 >gi|150021282|ref|YP_001306636.1| NAD synthetase [Thermosipho melanesiensis BI429] gi|149793803|gb|ABR31251.1| NAD+ synthetase [Thermosipho melanesiensis BI429] Length = 574 Score = 611 bits (1575), Expect = e-172, Method: Composition-based stats. Identities = 226/580 (38%), Positives = 337/580 (58%), Gaps = 34/580 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K+++ I QLN +GD GN+ K A + A + D ++F ELF++GYPPEDLV + SF+ Sbjct: 2 KIRVTIVQLNAHLGDFDGNLKKIYNAIDIAEKNQSDFVVFPELFLTGYPPEDLVLRTSFL 61 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + I+ + S + D I++G+ + + NS+ I+ G + K LPNYS F Sbjct: 62 KKNIEYINKIVSYSKDKKTVILIGYIDVEDDA-FNSLAIIHNGKFLGKYHKHLLPNYSVF 120 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F SG I + +I++GI ICEDIW + G + + + +ASPY++ K Sbjct: 121 DEHRYFKSGNEITIIEYNNIKIGINICEDIWSPIGPLHYQVLNGTQLIINSSASPYFYGK 180 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 K R + ++ + H PI+Y N VGGQDE++FDG S + + ++ K F E+ Sbjct: 181 RKLRKKYLSTKSYDYHCPIVYCNLVGGQDEVVFDGGSIVTTSEGNIMYECKPFEEEIVTL 240 Query: 244 EWHYDQQLSQW--------------------------NYMSDDSASTMYIPLQEEEADYN 277 + ++ L + + ST L+ EE + Sbjct: 241 DIPIEENLRTNLQDPRRRHISSTKIPNINIIKISNKIERKTKINVSTKNFSLKREEEIFK 300 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A L LRDY+ KN F KV+IGLSGG+DS+L AAIAV+ALGK+NV I++P Y+S S+E Sbjct: 301 AVTLGLRDYIIKNGFKKVVIGLSGGMDSSLVAAIAVEALGKDNVLGILMPSMYSSSHSIE 360 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 DA A+ LG KY ++ I ++ F + + + I EN+Q+RIRG ILMA+SN Sbjct: 361 DAKNLAENLGIKYYIIKIENIYYSFVNELKEIFSNTKEDITEENLQARIRGTILMAISNK 420 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 ++L T NKSEI+ GY TLYGDM GGF+P+KD+YKT V+++A W N Sbjct: 421 FGHIVLATGNKSEIATGYSTLYGDMVGGFSPIKDVYKTDVYKMAKWYNKFKG-------K 473 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRY 517 E+IP ++ K PSAELRP+Q DQ++LPPY ILD+I+K +E E S ++++ ETV+Y Sbjct: 474 EIIPQNVFVKPPSAELRPNQKDQDTLPPYEILDEILKLYIEKELSVEEISEKFDKETVKY 533 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +EYKRRQ +G K++ +SFG+DR PI++K+++ Sbjct: 534 VAKLVDKNEYKRRQGVIGVKVSERSFGKDRRMPITSKYKE 573 >gi|126461777|ref|YP_001042891.1| NAD synthetase [Rhodobacter sphaeroides ATCC 17029] gi|126103441|gb|ABN76119.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 554 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 248/558 (44%), Positives = 353/558 (63%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+AGN A ARRA +EA G D++ TE+F++GY +DLV ++ Sbjct: 1 MTERFRLTLAQLNPTVGDLAGNAALARRAWDEARAAGSDMLALTEMFVTGYQTQDLVMRR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ + I+ L +D + G I +G P + ++N+ +L+ G + A K +LPN Sbjct: 61 AFVEEAMATIERLAADCAE-GPAIGIGGPCLEDGRLMNAYWVLEGGRVSARVFKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W + ++C+ L + GAE L N SPY+ Sbjct: 120 EVFDEKRVFASGEVHGPCRVGPLRIGIPICEDSW-HPDVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 179 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ + A + P EADY+A VLSLRDY+ K+ F +V++GLS Sbjct: 239 VHVDFE-----ATDEGWRALPAPIVAQPDL-WEADYHAMVLSLRDYLGKSGFSRVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AAIA DALG E V+ +MLP ++TS SLEDAAA A+ALGC+ D + I Sbjct: 293 GGIDSALVAAIAADALGPEAVRCVMLPSRFTSQASLEDAAAVARALGCRLDEVGIGGPQE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + + G+ ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AVGAALGPLFEGTEPGVTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYCTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VFQ+ WRN H GP EVIPP +++K PSAELR Q D+ Sbjct: 413 DMNGGYNPIKDLYKTRVFQMCRWRNGHHCPWMKGPEGEVIPPRVIDKPPSAELREDQKDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD I++ +V+ EES + + ETV +E L+ GSE+KR Q+ GT++T Sbjct: 473 DSLPPYATLDAILEGLVDREESVAELVARGFERETVARIERLILGSEWKRFQSAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YP+ N++RD Sbjct: 533 RRAFWLDRRYPMVNRWRD 550 >gi|312115466|ref|YP_004013062.1| NAD+ synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311220595|gb|ADP71963.1| NAD+ synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 554 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 279/561 (49%), Positives = 369/561 (65%), Gaps = 8/561 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +IA AQLNPV+GD+AGN+A AR AR++A DL++FTELFI+GYPPEDL+ K Sbjct: 1 MTASFRIACAQLNPVLGDLAGNVALARAARDDARALAADLVVFTELFIAGYPPEDLILKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ AC A L + T DGG +++G P + N+V +L G I A+R K++LPNY Sbjct: 61 AFVAACMEATRALAATTADGGPALLIGTPWGEDGKAYNAVALLAGGRIQALRYKVDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F G +P+ F +RLG+ ICEDIW + + L +GAE L S N SP+ Sbjct: 121 SVFDEKRVFAPGPLPEPVDFAGLRLGLPICEDIWTPA-VVGSLAARGAELLISPNGSPFT 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ +++ LP++Y+NQ GGQDEL+FDGASF + LA Q+ + Sbjct: 180 LKKRTQRLDVARARVAETGLPLLYINQFGGQDELVFDGASFALNRDGALAAQLPAWETAL 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +TEW D + EA Y ACV+ LRDYV+KN F V++GLS Sbjct: 240 AITEWRRDAGGWACVEGPSARVE------EGREAAYLACVIGLRDYVEKNRFPGVVLGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+CAA+A DALG V IMLPY+YTS SL+DAAACA+ALG +YD++PIH V Sbjct: 294 GGIDSAICAAMATDALGAARVHCIMLPYRYTSNASLDDAAACAEALGVRYDIVPIHTAVE 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +++ + G+ EN+QSRIRG LMA+SN M++TT NKSE+S GY TLYG Sbjct: 354 AFGGMLAPLFKGAEPGLAEENLQSRIRGTTLMAVSNKFGGMVVTTGNKSEVSAGYATLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNP+KDLYKTQVF L+ +RN H LGP VIP +I+ K+P+AELR +QTDQ Sbjct: 414 DMNGGFNPIKDLYKTQVFALSRFRNEHVPKGCLGPGGVVIPDNIITKAPTAELRENQTDQ 473 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LDDI++ +V+ EE + + ETV+ VE LLY SEYKRRQA G KIT Sbjct: 474 DSLPPYDVLDDILESLVDREEPLSAVVARGHAPETVKKVERLLYLSEYKRRQAAPGVKIT 533 Query: 540 AKSFGRDRLYPISNKFRDHIS 560 ++FGRDR YPI N+FR+ + Sbjct: 534 ERNFGRDRRYPIVNRFREQLP 554 >gi|283856355|ref|YP_162634.2| NAD synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|283775354|gb|AAV89523.2| NAD+ synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 558 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 246/557 (44%), Positives = 352/557 (63%), Gaps = 6/557 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L I +AQ+ VG N + R+EA + +DLILF EL + GYPPEDLV K Sbjct: 3 MTDQLTILLAQIPQTVGHCRRNADAMLKIRQEAGK--VDLILFPELQLIGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +Q ++ L T DGGA ++VG Q++ + N+V +LD G I A+R K +LPNY Sbjct: 61 SLLQNAKEELERLALATSDGGAAMLVGTAWQEKGRIFNAVALLDQGKIAAIRYKHDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G +P++FRD+ LGI +CEDIW +C HLK++GAE L N SP+ Sbjct: 121 GTFDEKRIFSAGPLPEPVLFRDVSLGIPVCEDIWT-EKLCAHLKERGAEILLVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K RH++V ++ LP +Y+N+VGGQDE++FDG SF + + + + Sbjct: 180 SGKYPVRHKVVADRVKETGLPCLYLNRVGGQDEVVFDGGSFVVNRDGAVPISLPQWQADC 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++T WH + W+ + + Y A ++ L DYV++N F V++GLS Sbjct: 240 YVTHWH--KTEEGWSCDEGLQSKISEGEDRRLSDIYQAMMMGLGDYVRQNGFSGVLLGLS 297 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+AVDALG + V +MLP +YTS +SL+DA ACA+ LGC+ D +PI+ V Sbjct: 298 GGIDSALSAAVAVDALGADKVWCVMLPSRYTSQESLDDARACAEMLGCRLDSVPINPAVE 357 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 +++ + I ENIQSR+RG +LMA+SN M+LTT NKSE++VGY TLYG Sbjct: 358 AIDGMLAPLFSGKKPDITEENIQSRLRGVVLMAISNKFSPMVLTTGNKSEMAVGYATLYG 417 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG++ LKDLYK+ VF+++ WRNSH LGP V+P ++ K PSAELR Q D Sbjct: 418 DMNGGYSVLKDLYKSDVFKVSRWRNSHKPAHALGPDGYVMPDRVITKPPSAELREDQKDS 477 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD ++ ++E + S + + Y+ + V +E+LL+ +EYKRRQAP G K+ Sbjct: 478 DSLPPYDILDAVLHGLIEEDLSCSDLVKRGYDPDLVTRIENLLHRAEYKRRQAPPGVKLG 537 Query: 540 AKSFGRDRLYPISNKFR 556 +++FGRDR YP+S++FR Sbjct: 538 SRNFGRDRRYPLSHQFR 554 >gi|17229977|ref|NP_486525.1| NAD synthetase [Nostoc sp. PCC 7120] gi|17131577|dbj|BAB74184.1| NH(3)-dependent NAD(+) synthetase [Nostoc sp. PCC 7120] Length = 566 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 219/569 (38%), Positives = 320/569 (56%), Gaps = 34/569 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP++GD+ GN K ++A ++G L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQINPIIGDLTGNAQKILEIAQQAIKKGARLLLTPELSLCGYPPRDLLLNPSFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINL 117 A S + L D ++VG + + + NS +L+ G + + K L Sbjct: 61 AMSVTLQQLARDLP-VNLAVLVGTVEPNHQAHTTGGKPLFNSTALLENGKVKQMFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQG 167 P Y F E R F +G + +I +G+ ICED+W + N L G Sbjct: 120 PTYDVFDEHRYFEAGQQANYFALDNINIGVTICEDLWNDEEFWGKRSYTANPISDLAILG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K R ++ P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDLIVNLSASPYSLGKQSFREAMLRHSALRFQQPVIYTNQVGGNDDLIFDGRSFALNRQG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + K F+ ++ Q+ Q N ++ + E+E ++A VL +RDY Sbjct: 240 EVMCRAKGFASDLITVDFDESQRDLQLNSVAP-------VYESEDEEIWHALVLGVRDYA 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 QK F +V++GLSGGIDSAL A IA ALGKENV +++P Y+S S+ DA A A LG Sbjct: 293 QKCRFSQVVLGLSGGIDSALVATIATAALGKENVFGVLMPSPYSSEHSISDALALADNLG 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K +LPI +L+ F + + G+ ENIQSRIRGN+LMA++N +LL+T N Sbjct: 353 IKTQILPIGELMQSFDQSLVELFAGTEFGLAEENIQSRIRGNLLMAIANKFGYLLLSTGN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V+ L +W NSH + +IP +IL K Sbjct: 413 KSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCNWLNSHQ--------SPIIPENILTK 464 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSE 526 +PSAEL+P Q DQ+SLPPY ILDDI++R + N +S + V V ++ +E Sbjct: 465 APSAELKPGQVDQDSLPPYEILDDILQRFIHNHQSVGEIVAAGHEPVVVDRVIQMVARAE 524 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G KIT ++FG PI++ + Sbjct: 525 FKRRQAPPGLKITDRAFGTGWRMPIASNW 553 >gi|329895227|ref|ZP_08270891.1| Glutamine amidotransferase chain of NAD synthetase [gamma proteobacterium IMCC3088] gi|328922465|gb|EGG29807.1| Glutamine amidotransferase chain of NAD synthetase [gamma proteobacterium IMCC3088] Length = 546 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 226/558 (40%), Positives = 325/558 (58%), Gaps = 17/558 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMD-LILFTELFISGYPPEDLVFK 59 M + +++ +AQ N VGD GN+A + E A + +I+F EL ++GYPPEDL+ + Sbjct: 1 MTEAMQLVLAQCNTHVGDFEGNLALCKSIVERAQSEFSRPVIVFPELTLTGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S A+ L A ++VG+PR+ + N+ ++ G +I K LPN Sbjct: 61 PSIEPRVQVALSQLCDVVTT--AYVIVGYPRRIDGVLYNAAGVIHQGALIGEYHKWCLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F EKR F G + +++G+ ICEDIW K GAE + +LNASP+ Sbjct: 119 YQVFDEKRYFEPGTEPCVVAIHGVQVGLSICEDIW-APEPALAAKTAGAELILNLNASPF 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K +R IV +++ +P++YVNQVGGQDEL+FDG SF + Q Q+ Q+ F + Sbjct: 178 HRCKQNERLSIVAERVAETGIPVVYVNQVGGQDELVFDGGSFVMNSQGQVIKQLPRFDDA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 M + + ++D A LQE + A V+ +RDYV KN F V++GL Sbjct: 238 CEMVTYPFGPADVSEQAVTDQLAGFALTDLQEV---WQALVVGVRDYVNKNGFPGVVLGL 294 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGG+DSAL A+A ALG + VQ +M+P+KYTS SLEDAA A +G Y V+PI + Sbjct: 295 SGGVDSALTLAVAEAALGADRVQAVMMPFKYTSQMSLEDAAEQANRMGVNYSVIPIEPIY 354 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 N F S + + + EN+Q+R RG +LM++SN + ++LTT NKSEI+VGY TLY Sbjct: 355 NAFMSALEEEFEGRKPDTTEENLQARARGVVLMSISNKTGKLVLTTGNKSEIAVGYSTLY 414 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF+ LKD+ KT VF L +RNS L IP ++ + PSAEL P Q D Sbjct: 415 GDMAGGFDVLKDVPKTLVFALCWYRNS---------LGPCIPERVITRPPSAELAPDQKD 465 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLPPY +LD II VE + S N D+ + + V L+ +EYKRRQAP+G ++ Sbjct: 466 EDSLPPYEVLDQIIDLYVEQDCSAQNIIDKGFAEADVHRAVRLIDLNEYKRRQAPIGVRL 525 Query: 539 TAKSFGRDRLYPISNKFR 556 T + FGRDR YPI++K++ Sbjct: 526 TRRGFGRDRRYPITSKWK 543 >gi|187478133|ref|YP_786157.1| NAD synthetase [Bordetella avium 197N] gi|115422719|emb|CAJ49246.1| glutamine-dependent NAD synthetase [Bordetella avium 197N] Length = 542 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 225/560 (40%), Positives = 331/560 (59%), Gaps = 20/560 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++ IAQ+N VGD+AGN A+ +A EA +G D++L EL ++GYPPEDL+ + Sbjct: 1 MSVVRVGIAQINACVGDLAGNAARVLKAAREAYGRGADILLTPELVLTGYPPEDLLLRPL 60 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 FI+ + + L +D G ++VG + + + N+ +L G ++ K LPNY Sbjct: 61 FIERQQAVLAQLAADLAGLPGLHVLVGHVERREGHLYNAASVLCEGRVLGSYRKRELPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F E+R F+S + +R+G+ ICEDIW + A+ L NASPY Sbjct: 121 SVFDEQRYFLSDTQPLVFEVKGVRVGVNICEDIWFDRAPQAAADAG-AQVLLVPNASPYN 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R + ++ ++Y N VGGQDEL+FDGASF D + +L+ ++ F+E Sbjct: 180 LGKPTERLTVARRVVAATGCSLVYANLVGGQDELVFDGASFALDREGRLSARLPDFAEGL 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + +++ + L EEE +NA VL RDY+ KN F IIGLS Sbjct: 240 SLVDVDA--------RGAVGASAVVAPSLSEEEQVWNALVLGTRDYLGKNRFPGAIIGLS 291 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ AIAVDA+G +NV+ +M+P +YT+ SL DA A+ LG +YD + I +V+ Sbjct: 292 GGIDSAVVLAIAVDAVGADNVRAVMMPSRYTADISLTDARDMAQRLGVRYDEIVIGPIVD 351 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ P ENIQ+R RG +LMALSN + ++LTT NKSE+S GY TLYG Sbjct: 352 AFETALAPQFAGLPVDATEENIQARARGTLLMALSNKTGQLVLTTGNKSEMSTGYCTLYG 411 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF +KD+ KT V++LA WRN+ +++IP I+ + PSAELRP QTDQ Sbjct: 412 DMAGGFAVIKDVPKTLVYRLAVWRNTK---------SDIIPERIITRPPSAELRPDQTDQ 462 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ R +E S + + Y V V L+ +EYKRRQAP G ++T Sbjct: 463 DSLPSYDVLDGIVLRHMEQNASAADLLAEGYPPAAVEQVLRLIRINEYKRRQAPPGPRVT 522 Query: 540 AKSFGRDRLYPISNKFRDHI 559 A++FGRD YP++N FRD + Sbjct: 523 ARAFGRDWRYPVTNGFRDAV 542 >gi|257454474|ref|ZP_05619734.1| glutamine-dependent NAD(+) synthetase [Enhydrobacter aerosaccus SK60] gi|257448132|gb|EEV23115.1| glutamine-dependent NAD(+) synthetase [Enhydrobacter aerosaccus SK60] Length = 614 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 221/561 (39%), Positives = 326/561 (58%), Gaps = 15/561 (2%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + LKIA+AQ +VGD+ N K ++A +G ++I+F EL + GYPPEDL+ + S Sbjct: 67 MVGLKIAVAQQQFIVGDVINNAKKMVELAKDARDKGANIIVFPELSLLGYPPEDLLLRPS 126 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A + L + ++VG+P D G NSV I+ G K LPNY Sbjct: 127 LASRVKLAFELLYTV---KDIVMLVGYPHIDPNGTFNSVAIIHNGQQKGFYHKQCLPNYG 183 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E+R F +G++ ++ + +G+LICED+W+++ + LK++GAE + SLNASP+ Sbjct: 184 VFDERRYFNTGHNQVLFDYQGLTIGLLICEDLWQDA-PIRALKEKGAEIIISLNASPFEQ 242 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 NK ++R ++ + + ++PI+Y N VGGQD+L+FDG S + Q ++ + F + Sbjct: 243 NKQEQRKALLKSRATEHNIPIVYANSVGGQDDLVFDGGSMVVNAQGKIVQEAPRFLQHTL 302 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +D Q Q + + L + Y A V+ LRDYV + F V++GLSG Sbjct: 303 YVVARHDAQSGQVILSEQRKSP---LALSQIAETYQALVVGLRDYVNHSGFKGVLVGLSG 359 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL IAVDALG + V +M+PY+YTS SL+DA A A L Y V PIH V Sbjct: 360 GIDSALTLCIAVDALGADKVYAVMMPYEYTSQISLQDAQAQAHRLNVSYTVCPIHAAVEG 419 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + + ENIQ+R RG ILMALSN +++TT NKSE++VGY TLYGD Sbjct: 420 MRHTLEPMFSNTTADTTEENIQARARGMILMALSNKFGHLVITTGNKSEMAVGYATLYGD 479 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF+ LKD+YKTQV+ LA++RN T VIP ++ + PSAELRP Q DQ+ Sbjct: 480 MAGGFDVLKDVYKTQVYALANYRNRL-------EETPVIPERVITRPPSAELRPDQKDQD 532 Query: 482 SLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLP Y LD +++ ++ + + + Y+ + V+ V ++ +EYKRRQA +GTKIT Sbjct: 533 SLPDYDTLDKMLELYIDRDFGYDAIVEAGYDKDVVKKVLSMVDRNEYKRRQAAIGTKITH 592 Query: 541 KSFGRDRLYPISNKFRDHISE 561 ++FGR+R YP+ N + + Sbjct: 593 RAFGRERRYPLVNHWSLEFPK 613 >gi|161829967|ref|YP_001596848.1| NAD+ synthetase [Coxiella burnetii RSA 331] gi|161761834|gb|ABX77476.1| NAD+ synthetase [Coxiella burnetii RSA 331] Length = 542 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 228/556 (41%), Positives = 324/556 (58%), Gaps = 20/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 +KKL I AQLN +VGDI GN A +A ++ DLILF EL I+ YPPEDL+F+ Sbjct: 1 MKKLVIVGAQLNFLVGDIEGNTQLIIDAANQAYQESKADLILFPELSITSYPPEDLLFRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + A+ T+ +VVG+P N ++ G I+A K LPNY Sbjct: 61 ALYRRVHQALQTIADKVK--NTTVVVGYPDFIDNKCYNKAAVITDGKIVATYAKHELPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G I + +++GILICED+W N K GA+ + +NASP+ Sbjct: 119 RVFDEKRYFAAGDQPCVIEIKGVKIGILICEDLWL-ENPIKQSVAAGAQLIACINASPFA 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R +++T + H+PI+Y+N VGGQDEL+FDG S F+ +L Q + E+ Sbjct: 178 QDKSHHRRDLLTKRTKRYHIPIVYLNLVGGQDELVFDGGSLVFNQHGELIQQGSYLKEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E+ D L+ + +EE YN VL +RDY+ KNNF +IGLS Sbjct: 238 ITVEFDIDDNLTILTKTP------LPPEPLDEEKIYNVLVLGVRDYINKNNFPGAVIGLS 291 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AIAVDA+G E V +++P +TS S+EDA AKAL + + I + Sbjct: 292 GGVDSALTLAIAVDAIGSERVSGVLMPSPFTSTMSIEDAEGGAKALNVRTSTINIQPIFE 351 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+Q+RIRG +LMA+SN A++LTT NKSE++VGY TLYG Sbjct: 352 AFIRSLESEFTGLGKDVTEENLQARIRGTLLMAISNKKDAIVLTTGNKSEMAVGYATLYG 411 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKD+YKT V++L +RN+ ++ VIP +LE+ PSAEL P Q DQ Sbjct: 412 DMAGGFGVLKDVYKTMVYRLCRYRNT---------ISRVIPERVLERPPSAELAPDQKDQ 462 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 + LPPY ILD+I++R + +E ++ E V+ V ++ +EYKRRQAP+G +IT Sbjct: 463 DVLPPYHILDEILERYIAKDEDPTAIAAGGFDVEMVKKVVRMINRNEYKRRQAPIGIRIT 522 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 523 ERAFGKDRRYPITSGF 538 >gi|239815343|ref|YP_002944253.1| NAD+ synthetase [Variovorax paradoxus S110] gi|239801920|gb|ACS18987.1| NAD+ synthetase [Variovorax paradoxus S110] Length = 564 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 235/569 (41%), Positives = 319/569 (56%), Gaps = 18/569 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 LK+AIAQLN VVGD+AGN K A +A+ QG L+L EL I+GY EDL + +F Sbjct: 2 TLKLAIAQLNFVVGDLAGNARKIVDAARQAHAQGARLLLTPELSIAGYAAEDLFLRPAFT 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFP----RQDQEG----VLNSVVILDAGNIIAVRDK 114 +AC A+ + + D +VVG P + + N+ ++ G I+ K Sbjct: 62 EACDDAVKGIAAALADLKDMVVVVGHPTGGSLRSRSVAVQMRYNAASVIKEGRILETYAK 121 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPNY F E+R F G + +G+LICED W + + + GAE L + Sbjct: 122 RELPNYQVFDERRYFTPGQGTCVFEAGGVSVGVLICEDAWFD-EPAELARAAGAEVLAVI 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ K +R + + V LP++Y + VGGQDE++FDGASF LA Q + Sbjct: 181 NASPYHVGKEGERVARMADRARAVGLPLVYAHLVGGQDEVVFDGASFALQADGALAMQAE 240 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E + S + S + P + E ++A VL +RDY+ KN F Sbjct: 241 SFKESLVFMQMER----SPQGVEVVAAPSAIAAPREAEAQLWDALVLGVRDYIGKNGFPG 296 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 I+GLSGGIDSAL AIAVDALGK+ V+ +M+P YT+ S DA A LG +YD + Sbjct: 297 AILGLSGGIDSALVLAIAVDALGKDKVRAVMMPSPYTADISWIDAREMATRLGVRYDEIS 356 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I F ++ + P ENIQ+RIRG +LMALSN +++LTT NKSE++ G Sbjct: 357 IKHTFESFKGALADEFKGLPEDTAEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMATG 416 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGF +KDL KT VF LA WRN+H G IP I+ + PSAELR Sbjct: 417 YCTLYGDMAGGFAVIKDLLKTTVFALARWRNAHDP---YGTGASPIPDRIITRPPSAELR 473 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 P QTDQ+SLPPY ILD I+ R ++++E Y V V L+ +EYKRRQAP Sbjct: 474 PDQTDQDSLPPYDILDGILARYMQDDEGIDEIIAAGYERAVVERVARLIKINEYKRRQAP 533 Query: 534 VGTKITAKSFGRDRLYPISNKFRDHISEE 562 VG ++T +SFG+D YPI++KF + + Sbjct: 534 VGIRVTHRSFGKDWRYPITSKFNETAGAQ 562 >gi|83310332|ref|YP_420596.1| NAD synthetase [Magnetospirillum magneticum AMB-1] gi|82945173|dbj|BAE50037.1| Glutamine-dependent NAD(+) synthetase [Magnetospirillum magneticum AMB-1] Length = 551 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 256/556 (46%), Positives = 348/556 (62%), Gaps = 10/556 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L IA+AQ+NPVVGDIAGN+A R AR EA G DL++F EL + GYPPEDLV K Sbjct: 1 MSDTLSIALAQINPVVGDIAGNMALIRAARAEAQVLGADLVVFGELTLCGYPPEDLVLKG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ AC +A++ + +GG ++VG P + ++ + N+ ++LD G + A R K +LPNY Sbjct: 61 AFLDACEAAVEE-LAAETEGGPALLVGAPWRVKDRLHNAALLLDHGRVAATRLKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G + P+ FR +RLGI+ICED+W +++ + L + GAE L N SPY Sbjct: 120 GVFDEIRVFQPGPAPGPVSFRGVRLGIMICEDMW-YADVAETLGESGAEILVVPNGSPYE 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K KR + ++ LP+IYVNQVGGQDEL+FDGASF D A + + Q Sbjct: 179 MDKPTKRLDHARARVEETGLPLIYVNQVGGQDELVFDGASFVLDSDGATAASIAPWQSQV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T W + + P+ E Y A V LRDYV KN F V++GLS Sbjct: 239 ILTRWTRGSGGWRCD-------GPKAPPVSRLEGVYQALVTGLRDYVGKNRFPGVVLGLS 291 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+CAAIA DALG + V +M+P YTS +SLEDAA CA+ LG + D + I + Sbjct: 292 GGIDSAICAAIAADALGPDKVWCVMMPSPYTSEESLEDAAECARLLGVRLDTVNIGPAMG 351 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++++ + + I EN+QSR RG LM +SN M+L+T NKSE+S GY TLYG Sbjct: 352 AFETMLAPLFAGKDADITEENLQSRSRGLTLMGISNKFGPMVLSTGNKSEMSCGYATLYG 411 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+ LKD+YKT VF L+SWRN LGP V+P ++ K PSAEL+P Q DQ Sbjct: 412 DMCGGYAVLKDVYKTTVFALSSWRNGQRPPGCLGPQGRVMPDRVITKPPSAELKPDQKDQ 471 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 ++LPPY LD +++ ++E+E+S Y++ VR V +L +EYKRRQAP G KIT Sbjct: 472 DTLPPYDELDAMLEAMIEDEKSVAEIVAAGYDEAVVRRVWRMLDRAEYKRRQAPPGVKIT 531 Query: 540 AKSFGRDRLYPISNKF 555 ++SFG+DR YPI+N F Sbjct: 532 SRSFGKDRRYPITNAF 547 >gi|296136241|ref|YP_003643483.1| NAD+ synthetase [Thiomonas intermedia K12] gi|295796363|gb|ADG31153.1| NAD+ synthetase [Thiomonas intermedia K12] Length = 560 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 237/568 (41%), Positives = 325/568 (57%), Gaps = 25/568 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L++A+ Q NP VGD+AGN A+ R +A QG +++ EL ++GYPPEDL+ + +F+ Sbjct: 2 TLQLAVIQCNPTVGDLAGNAAQIARLTRQAYAQGARVVVTPELALTGYPPEDLLLRPAFL 61 Query: 64 QACSSAIDTLKSDTHDGG-AGIVVGFPR------------QDQEGVLNSVVILDAGNIIA 110 QA ++A+ L D D +VVG P Q N+ +L G + A Sbjct: 62 QASAAALKQLAHDLSDLPELALVVGHPLGLAAAEAPRIASTQQAVACNAASLLRGGVVEA 121 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K LPNY F E+R F G GI ICED W + + GA+ Sbjct: 122 TYCKHELPNYQVFDERRYFAPGDQPVVFEAGGTHFGINICEDAWLPHAP-RMARAAGAQV 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L LNASPY+ K +R ++ + + ++ VGGQDE++FDGASF D +L Sbjct: 181 LLVLNASPYHRGKTAERERVMRERCLENGMALVASQMVGGQDEIVFDGASFVLDHAGELV 240 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + F E + + L Q + + + + Y A VL +RDY+ KN Sbjct: 241 ARSPQFVEDILRVDVTGGEVLKQ-------TPAHVAPLKSDHAEVYAALVLGVRDYLGKN 293 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +IGLSGG DSAL AIAVDALG E V+ +M+P +YT+ SL+DAA A+ LG +Y Sbjct: 294 GFPGALIGLSGGADSALVLAIAVDALGAEKVRAVMMPSQYTAQISLDDAAEMAQRLGVQY 353 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 DVLPI L F + ++ L E P ENIQ+RIRG +LM LSN+S ++LTT NKSE Sbjct: 354 DVLPITPLFETFRTTLAPLLHEHPGDTTLENIQARIRGTLLMGLSNNSGRIVLTTGNKSE 413 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++GY TLYGDM+GGF +KD+ KT V++LA WRN+H G EVIP I+ ++PS Sbjct: 414 MAMGYATLYGDMAGGFAVIKDVTKTLVWELARWRNAHAAAMG---EAEVIPQRIITRAPS 470 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKR 529 AELR QTDQ+SLPPY +LD I++R +E +E Y V V HLL SEYKR Sbjct: 471 AELRADQTDQDSLPPYDVLDGILQRYMEQDERVETVLAAGYARADVERVVHLLKLSEYKR 530 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFRD 557 RQAP G ++T ++FGRD YPI++KFR+ Sbjct: 531 RQAPPGIRVTHRAFGRDWRYPITSKFRE 558 >gi|254466900|ref|ZP_05080311.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium Y4I] gi|206687808|gb|EDZ48290.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium Y4I] Length = 552 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 249/559 (44%), Positives = 347/559 (62%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN AKAR A EE + G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRVTLAQLNPTVGDLAGNAAKARTAWEEGRKAGADLVALPEMFITGYNTQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA + ++ L +D D G + VG P + + N+ +IL G I + K +LPN Sbjct: 61 VFHQAAIAEVEKLAADCAD-GPALAVGGPWVEGGRLYNAYLILKDGKIASRSLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L + GAEFL N SPY+ Sbjct: 120 TVFDEVRLFEAGPLGGPYSVSNTRIGSPICEDGW-HEDVAETLAETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R ++ + HLP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMEVRFNMMVARAVETHLPVIYLNMVGGQDDQVFDGGSFALNPGGALAVQMPLFDECI 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + ++P E E DY V SLRDY+ K F KV++GLS Sbjct: 239 TQVDL-----IRTGDGWRVEEGEKAHLPD-EWEQDYRVMVDSLRDYMGKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDALG ENV+ +MLP +YTS +SL+DA A AKALG +YD +PI + Sbjct: 293 GGVDSAIVAAIAVDALGAENVRCVMLPSEYTSRESLDDAEAVAKALGVRYDYVPISEARA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 S ++ + I ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITSTLAPLFAGLDADITEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ GP EVI P++++K PSAELR +Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNANHRPWMKGPAGEVIRPNVIDKPPSAELRENQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I++ +V+ E S + ++ + + VEHLLY SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDAILEILVDLEGSIADCVAAGFSRDVAKRVEHLLYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 533 PRAFWLDRRYPIVNRWRDP 551 >gi|307825849|ref|ZP_07656065.1| NAD+ synthetase [Methylobacter tundripaludum SV96] gi|307733157|gb|EFO04018.1| NAD+ synthetase [Methylobacter tundripaludum SV96] Length = 536 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 240/555 (43%), Positives = 333/555 (60%), Gaps = 24/555 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSF 62 LKIA+AQ N +VGDIA N+ RA A + G D+++F EL I+GYP EDL+ + F Sbjct: 2 TLKIALAQTNFLVGDIAANVDNIARAAIHARDELGADMVVFPELTITGYPAEDLLLRADF 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 I A ++A+ L G +VVGFP D + + NS +L G I+A K LPNY Sbjct: 62 ITAANNALYQLADRVA--GIALVVGFPEHDGDKLYNSAAVLHQGAILACYRKRALPNYGV 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E+R F +G F +G+ ICED+W+ I + K+ GAE L +LNASP+ Sbjct: 120 FDEQRYFTAGSQPCVFEFNGTFIGLTICEDVWR-QGIIEDNKQAGAELLLTLNASPFNSG 178 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K+ +R I+ Q+ +P++YVNQ+GGQDELIFDGASF D + F+ F EQ + Sbjct: 179 KIHQREAIICSQVKAAQIPLVYVNQIGGQDELIFDGASFVVDADGGIVFRAAEFKEQISV 238 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E+ ++ + S E ++Y A VL ++DYV+KN F I+GLSGG Sbjct: 239 VEFDGNKPVKTTCAPS----------YNEVSSEYQALVLGIKDYVRKNGFQGAILGLSGG 288 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL A+AVDALG + V+ ++LP +YT S EDA A+ALG K+ ++PI VN F Sbjct: 289 IDSALVLALAVDALGADKVEAVLLPSRYTQDMSNEDAMLEAEALGVKHHIIPIEPAVNAF 348 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 +++ ENIQ+R RG +LMALSN +LLTT NKSE+SVGY TLYGDM Sbjct: 349 TGMLADIFAGTAKDATEENIQARCRGVVLMALSNKQGKLLLTTGNKSEMSVGYATLYGDM 408 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 SGGF P+KD+ K ++QLA +RNS L+ IP ++ + PSAEL P Q D +S Sbjct: 409 SGGFAPIKDVPKLLIYQLAHYRNS---------LSPAIPERVITRPPSAELAPDQVDADS 459 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD I++R +E ++S + E V L+ +EYKRRQ+P G +ITA+ Sbjct: 460 LPPYDVLDPILERYIEKDQSAAEIIAAGFRREDVARAISLVDRNEYKRRQSPPGIRITAR 519 Query: 542 SFGRDRLYPISNKFR 556 +FGRDR YPI++ ++ Sbjct: 520 AFGRDRRYPITSGYK 534 >gi|77462885|ref|YP_352389.1| NAD synthetase [Rhodobacter sphaeroides 2.4.1] gi|77387303|gb|ABA78488.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides 2.4.1] Length = 554 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 248/558 (44%), Positives = 352/558 (63%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+AGN A ARRA +EA G D++ TE+F++GY +DLV ++ Sbjct: 1 MTERFRLTLAQLNPTVGDLAGNAALARRAWDEARAAGSDMLALTEMFVTGYQTQDLVLRR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ + I+ L +D + G I +G P + ++N+ +L+ G + A K +LPN Sbjct: 61 AFVEEAMATIERLAADCAE-GPAIGIGGPCLEDGRLMNAYWVLEGGRVSARVFKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W + ++C+ L + GAE L N SPY+ Sbjct: 120 EVFDEKRVFSSGEVHGPCRVGPLRIGIPICEDSW-HPDVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 179 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ + A + P EADY+A VLSLRDY+ K+ F +V++GLS Sbjct: 239 VHVDFE-----AADEGWRALPAPIVAQPDL-WEADYHAMVLSLRDYLGKSGFSRVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AAIA DALG E V+ +MLP ++TS SLEDAAA A+ALGC+ D + I Sbjct: 293 GGIDSALVAAIAADALGPEAVRCVMLPSRFTSQASLEDAAAVARALGCRLDEVGIGGPQE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + + GI ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AVGAALGPLFEGTEPGITEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYCTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VFQ+ WRN H GP EVIPP +++K PSAELR Q D+ Sbjct: 413 DMNGGYNPIKDLYKTRVFQMCRWRNGHHRPWMKGPEGEVIPPRVIDKPPSAELREDQKDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD I++ +V+ EE + + ETV +E L+ GSE+KR Q+ GT++T Sbjct: 473 DSLPPYATLDAILEGLVDREEGVAELVARGFERETVARIERLILGSEWKRFQSAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YP+ N++RD Sbjct: 533 RRAFWLDRRYPMVNRWRD 550 >gi|183599762|ref|ZP_02961255.1| hypothetical protein PROSTU_03267 [Providencia stuartii ATCC 25827] gi|188022023|gb|EDU60063.1| hypothetical protein PROSTU_03267 [Providencia stuartii ATCC 25827] Length = 540 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 231/556 (41%), Positives = 334/556 (60%), Gaps = 23/556 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL I++AQLN +VGDI GN + + EE + D+++F+EL ++GYPPEDL+F+ Sbjct: 1 MSRKLNISLAQLNWLVGDIEGNCERMLQVFEE-QKNIADIVVFSELSLTGYPPEDLLFRA 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q ++ L++ + + IVVG P + + N++ G ++ K LPNY Sbjct: 60 DFTQRYLVQLERLQNASTE--TAIVVGHPWTEAGKMYNALSFFYQGKLLTRYFKQELPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + F+ R+G+LICEDIW + +K+ GAE L ++NASPY Sbjct: 118 GVFDELRYFSAGDKTGVVDFKGYRIGLLICEDIWFD-GPVDAVKQAGAELLLTINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R +++ LPIIY+NQVGGQDELIFDG S ++ Q+ F EQ Sbjct: 177 RNKDHSRSDLLVRHCQRTQLPIIYLNQVGGQDELIFDGGSKVLASDGKITHQLVDFDEQI 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 Q+N +S + L Y V++ RDY+ KN F+ I+GLS Sbjct: 237 V---------NCQFNELSAVPMEKLAPALSPVAQVYQGLVMATRDYINKNGFNGAILGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDA+GKE VQ +M+P++YTS S+ DA A+ LG ++D++ I + + Sbjct: 288 GGIDSGLTVAIAVDAIGKERVQAVMMPFRYTSEMSIHDAKEQAELLGVEFDIVSIEPMFD 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 348 AFMSQLQPMFEGTAVDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 408 DMAGGFDVLKDVPKTLVFELAKYRNT---------ISPAIPQRVIDRPPSAELAPGQLDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD +++ VE + S +Q +++ TV V L+ +EYKRRQAPVG +IT Sbjct: 459 DSLPPYDILDALLEAYVEKDYSVAQLIEQGFDEATVHRVVRLVDINEYKRRQAPVGPRIT 518 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 519 VRNFGKDRRYPITSGF 534 >gi|226951210|ref|ZP_03821674.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Acinetobacter sp. ATCC 27244] gi|226838040|gb|EEH70423.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Acinetobacter sp. ATCC 27244] Length = 541 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 229/556 (41%), Positives = 323/556 (58%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G+I N K A +Q DLI+F EL GYP EDL+ + + Sbjct: 1 MKNFKIALAQFSPHIGNIDANTQKMVEQANLAKQQQADLIVFPELSTLGYPAEDLILRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A+ L +V GF Q ++G NS ++ G ++ + +K NLPNY Sbjct: 61 LQKRTQKALAQLSEV---KDIVMVFGFVHQTEDGHRYNSAAVMKDGQVLGIYNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICED+W + N K L + E + LNASPY Sbjct: 118 GVFDEKRYFQEGHQHLVFEYLGHKFGVLICEDVW-SLNTVKQLSQLNVETVLILNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ ++L I+YVNQVGGQD+LIFDG+SF + +LA Q F E Sbjct: 177 VGKPQHRIQTLSELAKQLNLNIVYVNQVGGQDDLIFDGSSFVNNHNGELALQAPSFKEAV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + TE+ +Q + D+ + Y A V+S RDYVQ++ F VI+GLS Sbjct: 237 YFTEYDV----AQKQFKKADAIPALDT----FAEIYQALVMSTRDYVQRSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G + VQ +M+PY YTS S+EDA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGADKVQAVMMPYTYTSQMSVEDATEQARRMGVTFGIAEIHPIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L+T NKSEISVGY TLYG Sbjct: 349 SFMQTLFPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSEISVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF+ LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFSVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + S + + Y + V V L+ +EYKRRQ +G +I+ Sbjct: 462 DSLPAYDVLDAILYAYIEEDLSQADIIAKGYEADVVEKVIRLVDRNEYKRRQGAIGPRIS 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIVNGW 537 >gi|56695341|ref|YP_165689.1| NAD synthetase [Ruegeria pomeroyi DSS-3] gi|56677078|gb|AAV93744.1| glutamine-dependent NAD(+) synthetase [Ruegeria pomeroyi DSS-3] Length = 552 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 245/559 (43%), Positives = 341/559 (61%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I +AQLNP VGD+AGN AKAR A E G DL+ E+F++GY +DLV K Sbjct: 1 MADRFRITLAQLNPTVGDLAGNAAKARMAWEHGREAGADLVALPEMFVTGYNTQDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F A + I+ L + D G + +G P ++ + N+ +IL G I++ K +LPN Sbjct: 61 VFHDAAIAMIEALAEECAD-GPALAIGGPLVEEGKLYNAYLILKGGKIVSRSLKTHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRIFDAGPLGGPYSVGNTRIGSPICEDAW-HEDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R + ++ LP+IY+N VGGQD+ +FDG +F + LAF+M F E Sbjct: 179 RDKYDMRINQMVARVVETGLPLIYLNMVGGQDDQVFDGGTFGLNPGGALAFRMPVFDEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T ++ W + + A E DY V SLRDY++K F KV++GLS Sbjct: 238 -ITHVDLERGSEGWQIVQGEVAPLP----DAWEQDYRVMVESLRDYMRKTGFAKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AAIA DALG ENV+ +MLP +YTS SL+DA A A+ALG +YD +PI + Sbjct: 293 GGVDSALVAAIATDALGPENVRCVMLPSEYTSRSSLDDAEAVAQALGVRYDYVPISESRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ G+ ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AVTNTLAPLFAGTEPGLTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI PS+++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNANHRLWMMGPAGEVIRPSVIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I+ +V+ + S + ++ + R VEHL+Y SEYKR QA G ++T Sbjct: 473 DSLPDYPELDAILDILVDQDGSIADCVAAGFDRDVARRVEHLIYISEYKRYQAAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 533 PRAFWLDRRYPIVNRWRDP 551 >gi|83949870|ref|ZP_00958603.1| NAD(+) synthase [Roseovarius nubinhibens ISM] gi|83837769|gb|EAP77065.1| NAD(+) synthase [Roseovarius nubinhibens ISM] Length = 552 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 240/559 (42%), Positives = 333/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLN VGDI GN KARRA +E G DL+ E+FI+GY +DLV K Sbjct: 1 MSDRFRLTLAQLNATVGDIEGNAEKARRAWQEGRDAGADLVALPEMFITGYNTQDLVRKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q +AID L D D G + +G P + + N+ IL G + K +LPN Sbjct: 61 VFHQHAIAAIDQLARDCAD-GPALAIGGPWLEGAELHNAYHILQGGQVSRRVLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + S P +R+G ICED W + ++ + L++ GAE L N SPYY Sbjct: 120 TVFDEVRLYGSAPIGGPYAVDGLRIGSPICEDAW-HEDVTETLEETGAELLLIPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R ++ ++ LP++Y+N VG QD+ +FDG SF + +LA QM F E Sbjct: 179 RNKMETRQNLMVSRVIETGLPLVYLNLVGAQDDQVFDGGSFVLNPGGELALQMPLFQEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + W D A E DYNA VLSLRDY+ K F KV++GLS Sbjct: 238 -IAHLDLVDTGAGWRAEKGDLAPLP----DAWEQDYNAMVLSLRDYMGKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DA+G +NV+ +MLP +YTS SL+DA A A+ LGC YD +PI Sbjct: 293 GGIDSAIVATIAADAIGADNVRCVMLPSEYTSQASLDDAKALAENLGCSYDFVPISQSRQ 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AVTETLAPLFEGHAPDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP VIP +I+ K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPAGAVIPENIITKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I++ +V+ + S + ++ + + VEHL+Y SEYKR Q+ GT++T Sbjct: 473 DSLPDYPVLDAILEILVDQDGSIEDCVRAGFDRDVAKRVEHLIYISEYKRFQSAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 +F DR YPI N++RD Sbjct: 533 KGAFWLDRRYPIVNRWRDP 551 >gi|260752640|ref|YP_003225533.1| NAD synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552003|gb|ACV74949.1| NAD+ synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 558 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 245/557 (43%), Positives = 351/557 (63%), Gaps = 6/557 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L I +AQ+ VG N + R+EA + +DLILF EL + GYPPEDLV K Sbjct: 3 MTDQLTILLAQIPQTVGHCRRNADAMLKIRQEAGK--VDLILFPELQLIGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +Q ++ L T DGGA ++VG Q++ + N+V +LD G I A+R K +LPNY Sbjct: 61 SLLQNAKEELERLALATSDGGAAMLVGTAWQEKGRIFNAVALLDQGKIAAIRYKHDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G +P++FRD+ LGI +CEDIW +C HLK++GAE L N SP+ Sbjct: 121 GTFDEKRIFSAGPLPEPVLFRDVSLGIPVCEDIWT-EKLCAHLKERGAEILLVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++V ++ LP +Y+N+VGGQDE++FDG SF + + + + Sbjct: 180 SGKYPVRRKVVADRVKETGLPCLYLNRVGGQDEVVFDGGSFVVNRDGAVPVSLPQWQADC 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++T WH + W+ + + Y A ++ L DYV++N F V++GLS Sbjct: 240 YVTHWH--KTEEGWSCDEGLQSKILEGEDGRLSDIYQAMMMGLGDYVRQNGFSGVLLGLS 297 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+AVDALG + V +MLP +YTS +SL+DA ACA+ LGC+ D +PI+ V Sbjct: 298 GGIDSALSAAVAVDALGADKVWCVMLPSRYTSQESLDDARACAEMLGCRLDSVPINPAVE 357 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 +++ + I ENIQSR+RG +LMA+SN M+LTT NKSE++VGY TLYG Sbjct: 358 AIDGMLAPLFSGKKPDITEENIQSRLRGVVLMAISNKFSPMVLTTGNKSEMAVGYATLYG 417 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG++ LKDLYK+ VF+++ WRNSH LGP V+P ++ K PSAELR Q D Sbjct: 418 DMNGGYSVLKDLYKSDVFKVSRWRNSHKPAHALGPDGYVMPDRVITKPPSAELREDQKDS 477 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD ++ ++E + S + + Y+ + V +E+LL+ +EYKRRQAP G K+ Sbjct: 478 DSLPPYDILDAVLHGLIEEDLSCSDLVKRGYDPDLVTRIENLLHRAEYKRRQAPPGVKLG 537 Query: 540 AKSFGRDRLYPISNKFR 556 +++FGRDR YP+S++FR Sbjct: 538 SRNFGRDRRYPLSHQFR 554 >gi|88800780|ref|ZP_01116337.1| NAD synthase [Reinekea sp. MED297] gi|88776486|gb|EAR07704.1| NAD synthase [Reinekea sp. MED297] Length = 538 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 232/552 (42%), Positives = 326/552 (59%), Gaps = 19/552 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ VGDI GN+ K EA QG D+I+F EL ++GYPPEDL+ + S + Sbjct: 1 MKLALAQQRFPVGDIDGNVDKILTLSREAMAQGADMIVFPELTLTGYPPEDLLLRPSLAK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S A+ L +VVG+P+++ + N V+++ G +IA K +LPNY F Sbjct: 61 RVSQAMHRLFD--ARLPIAMVVGYPQREDGKLYNKVMVISEGQVIADYRKQHLPNYQVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G F R+G+ ICEDIW + + + GA+ ++N SPY N+ Sbjct: 119 EKRYFQKGDQTCVFDFMGARIGLSICEDIWYD-GPARRAYEAGAQINLNINGSPYSINRT 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +RHE VT +S + +YVN VGGQDEL+FDG SF + + F E E Sbjct: 178 AERHEQVTRVVSQWPMATVYVNHVGGQDELVFDGGSFVVGADATVQASLPEFQEALQYVE 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + Q + + P+ E A Y A L DYV +N F V++G+SGGID Sbjct: 238 LTQEANGWQV------KSGEVTPPMSVEAALYEALKTGLADYVNRNRFPGVVLGMSGGID 291 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AAIAVDALG + V +M+PY YT+ SLEDA A+ LG +Y+VLPI + + Sbjct: 292 SALSAAIAVDALGPDRVMGVMMPYHYTAKISLEDAEDEARRLGIRYEVLPIGEAFEAALT 351 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + P+ + +N+QSR+RG LMALSN + M+LTT NKSE++VGY TLYGDM G Sbjct: 352 TLQPQFGDRPADVTEQNMQSRMRGLFLMALSNKTGNMVLTTGNKSEMAVGYATLYGDMCG 411 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 G+N LKD+ K V++L+ WRNS EVIP ++ + PSAEL P Q D++SLP Sbjct: 412 GYNCLKDVPKLWVYRLSRWRNS---------FGEVIPERVITRPPSAELAPDQLDEDSLP 462 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD II+R VE++ES + +N++ V+ V L+ +EYKRRQAP G ++T + F Sbjct: 463 PYEVLDAIIERYVEHDESQQTIIESGFNEDDVKRVIRLIDLNEYKRRQAPEGVRVTKRGF 522 Query: 544 GRDRLYPISNKF 555 GRDR YPI++ + Sbjct: 523 GRDRRYPITHGW 534 >gi|260553998|ref|ZP_05826263.1| glutamine-dependent NAD+ synthetase [Acinetobacter sp. RUH2624] gi|260404884|gb|EEW98389.1| glutamine-dependent NAD+ synthetase [Acinetobacter sp. RUH2624] Length = 541 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 226/556 (40%), Positives = 323/556 (58%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQLSEV---KDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRKQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ E+ D +L + + + I Y V++ RDYV+++ F VI+GLS Sbjct: 237 YIAEFDRDTKLYKVTESAPALETFAEI--------YQGLVMATRDYVERSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE+SVGY TLYG Sbjct: 349 SFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + + + ++ E V V L+ +EYKRRQ +G +IT Sbjct: 462 DSLPAYDVLDAILYAYIEEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRIT 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIVNGW 537 >gi|84683380|ref|ZP_01011283.1| glutamine-dependent NAD(+) synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84668123|gb|EAQ14590.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium HTCC2654] Length = 555 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 245/559 (43%), Positives = 339/559 (60%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ +AQLNPVVGDI GN AR A A G D+++ TE F++GY P+DLV + Sbjct: 3 MADTFRLTLAQLNPVVGDIPGNADMARAAWTAAKEAGADMVMLTESFLTGYQPQDLVMRP 62 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F A + L D D G + +G P D + + N+ +L+ G + K LPN Sbjct: 63 AFWSEAMEACEALAKDVAD-GPVMGIGCPYHDGKDLYNAYWVLEGGRVRRRILKQMLPNE 121 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F EKR F DPI + LGI ICED W +C++L +GAE L N SPYY Sbjct: 122 TVFDEKRLFSHAEPQDPIKIGPLTLGIPICEDAWWPDAVCENLADKGAEVLAVPNGSPYY 181 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ RH ++ ++ LP+IY+N VGGQD+ +FDGASF D Q +LAFQ + F E Sbjct: 182 RGKVETRHGVMRARVEETGLPLIYLNMVGGQDDQVFDGASFGMDAQGELAFQFREFDE-- 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ W + + + + Y V SLRDY+ K F KV++GLS Sbjct: 240 VIRHVDLEKGDDGWRIVPGEVVPALPAYEAD----YRVMVQSLRDYMGKTGFKKVLLGLS 295 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DALG ENV+ +MLP +YTS SL+DA A A+ LGC YD +PI + Sbjct: 296 GGIDSAIVATIAADALGPENVRCVMLPSEYTSQGSLDDAKAVAERLGCHYDFVPIKGPRD 355 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 356 AVTEALAPLFEGYAPDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 415 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYK +VF+ WRN++ +GP EVIP SI++K PSAELR Q D Sbjct: 416 DMAGGYNPIKDLYKMRVFETCRWRNANHRDWMMGPAGEVIPVSIIDKPPSAELRDDQKDS 475 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ +V+ E S Q ++ +TV+ VEHL++ SEYKR Q+ G ++T Sbjct: 476 DSLPPYEVLDAILEGLVDKELSVAELVAQGFDRDTVKKVEHLIFISEYKRFQSAPGARLT 535 Query: 540 AKSFGRDRLYPISNKFRDH 558 +SF DR YPI N++RD Sbjct: 536 MRSFWLDRRYPIVNRWRDK 554 >gi|126666675|ref|ZP_01737652.1| NAD synthase [Marinobacter sp. ELB17] gi|126628720|gb|EAZ99340.1| NAD synthase [Marinobacter sp. ELB17] Length = 554 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 215/558 (38%), Positives = 329/558 (58%), Gaps = 21/558 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKKSF 62 L++ + Q + +VGDI GN + A +A+ Q D+++F EL ++GYPPEDL+ + S Sbjct: 16 PLRLVMVQQDFLVGDIPGNAQRIVAAVRQADDQHQADIVVFPELALTGYPPEDLLLRPSL 75 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +AID + +V G P ++ + N+ ++++ G I K PNY Sbjct: 76 DIRVQAAIDEICG--AGLAPVVVFGAPVRENGKLYNAALVMENGKISHRYFKQCPPNYQV 133 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F SG+ + + R + +GI +CED+W + GA+ + +LNASPY Sbjct: 134 FDEKRYFASGFESSVVSLRGVNVGITVCEDLW-AEGPVETAAAAGAKLVLNLNASPYSKG 192 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K +R +V + +PI+YVN VG QDEL+FDG S DG+ ++A + F + F+ Sbjct: 193 KQLRRKALVQRKAKAAGVPIVYVNLVGAQDELVFDGGSLVADGKGEIAAEAPQFEQGLFV 252 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++ + + + PL A Y A V+ +RDYV KN F V++GLSGG Sbjct: 253 VDF-------KCGEICQPVTQPLPQPLSASAAVYQALVMGVRDYVGKNGFKSVVLGLSGG 305 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL AIAVDALGK V+ +M+P++YTS SL+DA A A +G YDV I + + F Sbjct: 306 IDSALTLAIAVDALGKAQVRAVMMPFRYTSDISLQDAEAQASTMGVHYDVFSIEPMYDTF 365 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + +++ EN+Q+R+RG +LM+LSN +++LTT NKSE++VGY TLYGDM Sbjct: 366 MATLAEPFTGTTVDTTEENLQARLRGVLLMSLSNKFGSLVLTTGNKSEMAVGYSTLYGDM 425 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF+ LKD+ KTQVF+L+ +RN+ + VIP ++ + PSAEL P Q D+++ Sbjct: 426 AGGFDVLKDVAKTQVFELSRYRNT---------VAPVIPERVITRPPSAELAPDQKDEDN 476 Query: 483 LPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LP Y +LD I++R VE +ES + ++ V V L+ +EYKRRQAP+G +++ + Sbjct: 477 LPGYDVLDAILQRYVEQDESAEVIIAAGFDRTDVERVIRLVDINEYKRRQAPIGVRVSER 536 Query: 542 SFGRDRLYPISNKFRDHI 559 FG+DR YPI+N ++ + Sbjct: 537 GFGKDRRYPITNGWKSGV 554 >gi|241762372|ref|ZP_04760451.1| NAD+ synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373059|gb|EER62708.1| NAD+ synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 558 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 245/557 (43%), Positives = 350/557 (62%), Gaps = 6/557 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L I +AQ+ VG N + R+EA + +DLILF EL + GYPPEDLV K Sbjct: 3 MTDQLTILLAQIPQTVGHCRRNADAMLKIRQEAGK--VDLILFPELQLIGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +Q ++ L T DGGA ++VG Q++ + N+V +LD G I A+R K +LPNY Sbjct: 61 SLLQNAKEELERLALATSDGGAAMLVGTAWQEKGRIFNAVALLDQGKIAAIRYKHDLPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G +P++FRD+ LGI +CEDIW +C HLK++GAE L N SP+ Sbjct: 121 GTFDEKRIFSAGPLPEPVLFRDVSLGIPVCEDIWT-EKLCDHLKERGAEILLVPNGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++V ++ LP +Y+N+VGGQDE++FDG SF + + + + Sbjct: 180 SGKYPVRRKVVADRVKETGLPCLYLNRVGGQDEVVFDGGSFVVNRDGAVPVSLPRWQADC 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++T WH + W+ + Y A ++ L DYV++N F V++GLS Sbjct: 240 YVTRWH--KTEEGWSCDEGLQSKISEGEDGRLSDIYQAMMMGLGDYVRQNGFSGVLLGLS 297 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+AVDALG + V +MLP +YTS +SL+DA ACA+ LGC+ D +PI+ V Sbjct: 298 GGIDSALSAAVAVDALGADKVWCVMLPSRYTSQESLDDARACAEMLGCRLDSVPINPAVE 357 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 +++ + I ENIQSR+RG +LMA+SN M+LTT NKSE++VGY TLYG Sbjct: 358 AIDGMLAPLFSGKKPDITEENIQSRLRGVVLMAISNKFSPMVLTTGNKSEMAVGYATLYG 417 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG++ LKDLYK+ VF+++ WRNSH LGP V+P ++ K PSAELR Q D Sbjct: 418 DMNGGYSVLKDLYKSDVFKVSRWRNSHKPAHALGPDGYVMPDRVITKPPSAELREDQKDS 477 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD ++ ++E + S + + Y+ + V +E+LL+ +EYKRRQAP G K+ Sbjct: 478 DSLPPYDILDAVLHGLIEEDLSCSDLVKRGYDPDLVTRIENLLHRAEYKRRQAPPGVKLG 537 Query: 540 AKSFGRDRLYPISNKFR 556 +++FGRDR YP+S++FR Sbjct: 538 SRNFGRDRRYPLSHQFR 554 >gi|169796959|ref|YP_001714752.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii AYE] gi|184157129|ref|YP_001845468.1| NAD synthase [Acinetobacter baumannii ACICU] gi|213156635|ref|YP_002318296.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii AB0057] gi|215484420|ref|YP_002326653.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB307-0294] gi|239501190|ref|ZP_04660500.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB900] gi|260555750|ref|ZP_05827970.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii ATCC 19606] gi|301347384|ref|ZP_07228125.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB056] gi|301513386|ref|ZP_07238623.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB058] gi|301596831|ref|ZP_07241839.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB059] gi|332854834|ref|ZP_08435584.1| NAD+ synthase [Acinetobacter baumannii 6013150] gi|332876339|ref|ZP_08444111.1| NAD+ synthase [Acinetobacter baumannii 6014059] gi|169149886|emb|CAM87777.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii AYE] gi|183208723|gb|ACC56121.1| NAD synthase [Acinetobacter baumannii ACICU] gi|213055795|gb|ACJ40697.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii AB0057] gi|213986356|gb|ACJ56655.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter baumannii AB307-0294] gi|260410661|gb|EEX03959.1| glutamine-dependent NAD+ synthetase [Acinetobacter baumannii ATCC 19606] gi|322507027|gb|ADX02481.1| NadE [Acinetobacter baumannii 1656-2] gi|323516895|gb|ADX91276.1| NAD synthase [Acinetobacter baumannii TCDC-AB0715] gi|332727766|gb|EGJ59171.1| NAD+ synthase [Acinetobacter baumannii 6013150] gi|332735458|gb|EGJ66513.1| NAD+ synthase [Acinetobacter baumannii 6014059] Length = 541 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 226/556 (40%), Positives = 323/556 (58%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQLSEV---KDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRKQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ E+ D +L + + + I Y V++ RDYV+++ F VI+GLS Sbjct: 237 YIAEFDRDTKLYKVVESAPALETFAEI--------YQGLVMATRDYVERSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE+SVGY TLYG Sbjct: 349 SFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + + + ++ E V V L+ +EYKRRQ +G +IT Sbjct: 462 DSLPAYDVLDAILYAYIEEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRIT 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIVNGW 537 >gi|330966002|gb|EGH66262.1| glutamine-dependent NAD+ synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 535 Score = 608 bits (1567), Expect = e-171, Method: Composition-based stats. Identities = 230/550 (41%), Positives = 326/550 (59%), Gaps = 20/550 (3%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFIQACS 67 +AQLN VGD+ GN+ K +A + A G +I+F EL + GYPPEDL+ + S Sbjct: 1 MAQLNIRVGDVHGNVEKIIKAAQTARDDLGAHVIVFPELTLCGYPPEDLLLRSSMQSRIE 60 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 A+ ++ G IV+GFP + NS ++ G +A K LPNY F EKR Sbjct: 61 KALARVREAAR--GIVIVIGFPWVEDGARYNSCAVISEGEEVARYYKQRLPNYRVFDEKR 118 Query: 128 TFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 F SG + I++GI ICEDIW S K GA+ + +LNASP++ K +R Sbjct: 119 YFESGSGPCVVNLFGIQVGITICEDIW-FSEPLKQACDAGAQIMLTLNASPFHRGKQAER 177 Query: 188 HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY 247 ++ + +P++YVNQVGGQDEL+FDG SF DG ++ + F E ++T++ Sbjct: 178 EALLAQRADECSIPMMYVNQVGGQDELVFDGNSFVVDGNGKVTQRAPAFEEGLYVTDFD- 236 Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + T+ L E + Y A V ++DYV +N F V++GLSGGIDSAL Sbjct: 237 -----CTDNSLVPVPGTVTELLSLEASVYQALVSGVKDYVHRNGFKGVVLGLSGGIDSAL 291 Query: 308 CAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A+A DALG ENV+ +M+PY YT+ S +DA A LG KY VLPI +V F S ++ Sbjct: 292 VLAVAADALGAENVEAVMMPYHYTAQMSQDDAREEADILGVKYSVLPIASMVEAFLSTLA 351 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + EN+Q+R RG +LMA+SN + ++LTT NKSE++VGY TLYGDM+GGF+ Sbjct: 352 PMFEGLGKDTTEENLQARCRGTMLMAISNKKRYLVLTTGNKSEMAVGYATLYGDMAGGFD 411 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYP 487 LKD+ KT VF+L +RN+ L VIP ++++ PSAEL P Q D++SLPPYP Sbjct: 412 VLKDVPKTLVFKLCEYRNT---------LDYVIPQRVIDRPPSAELAPDQKDEDSLPPYP 462 Query: 488 ILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRD 546 +LD+I++ VE + S ++ ++ E VR V L+ +EYKRRQA VG +IT + FGRD Sbjct: 463 VLDEILRLYVEQDLSADAIIEEGFDTEVVRKVIRLVDLNEYKRRQAAVGPRITERGFGRD 522 Query: 547 RLYPISNKFR 556 R YPI++ +R Sbjct: 523 RRYPITSGWR 532 >gi|169634065|ref|YP_001707801.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii SDF] gi|169152857|emb|CAP01886.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter baumannii] Length = 541 Score = 608 bits (1567), Expect = e-171, Method: Composition-based stats. Identities = 225/556 (40%), Positives = 322/556 (57%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQLSEV---KDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL +YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRKQTLSELAKQLHLNTVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ E+ D +L + + + I Y V++ RDYV+++ F VI+GLS Sbjct: 237 YIAEFDRDTKLYKVVESAPALETFAEI--------YQGLVMATRDYVERSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE+SVGY TLYG Sbjct: 349 SFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + + + ++ E V V L+ +EYKRRQ +G +IT Sbjct: 462 DSLPAYDVLDAILYAYIEEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRIT 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIVNGW 537 >gi|293609041|ref|ZP_06691344.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829614|gb|EFF87976.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 541 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 226/556 (40%), Positives = 322/556 (57%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQVNQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQLAEV---KDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRIQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDI 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ E+ D +L + + + I Y V++ RDYV+++ F VI+GLS Sbjct: 237 YIAEFDRDTKLYKVTESAPALETFAEI--------YQGLVMATRDYVERSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGAEKVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L T NKSE+SVGY TLYG Sbjct: 349 SFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLATGNKSELSVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + + + ++ E V V L+ +EYKRRQ +G +IT Sbjct: 462 DSLPAYDVLDAILYAYIEEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRIT 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIVNGW 537 >gi|238897451|ref|YP_002923128.1| NAD synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465206|gb|ACQ66980.1| NAD synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 538 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 239/557 (42%), Positives = 342/557 (61%), Gaps = 23/557 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN VGDI GN +E Q DL+LF+EL +SGYPPED +F+ Sbjct: 1 MSRSLSIALAQLNFCVGDIKGNTELILNVLQEQKNQ-ADLVLFSELALSGYPPEDWLFRD 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F +C + + L+ +H+ ++G P ++++ + N++ + G ++A K LPN+ Sbjct: 60 DFYHSCETQLLRLQKASHE--VSFLLGHPFREKDRLYNALSVFSEGKLLARYYKQCLPNH 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F SG + + F+ RLG+LICED+W + K GAE L S+NASPY Sbjct: 118 GVFDEARYFSSGKTTQILAFKGYRLGLLICEDLW-HEGPVDSAKAAGAEILLSINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K ++R +++ LP+IY+NQVGGQDELIFDG S + + ++ FSE+ Sbjct: 177 QKKYQRRQNMLSQHCLRTDLPLIYLNQVGGQDELIFDGRSQVLNKTGETVLELPAFSEKT 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + EW + ++ S P + +Y A V++LRDYVQKN F V++GLS Sbjct: 237 LLCEWTETRIKTK---------SLKVNPPEPFAEEYQALVMALRDYVQKNGFQGVLMGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALGK V+ M+P +YT S+ A AK LG +++L I + Sbjct: 288 GGIDSALTLAIAVDALGKSKVRAYMMPSRYTPSDSVMYAQTQAKHLGVTFEILSIEPIFE 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F S + L+E+ I EN+Q+R RG +LM LSN ++LTTSNKSE +VGY TLYG Sbjct: 348 AFLSSLKGLLKEDLKDITKENLQARCRGMLLMGLSNQLGDLVLTTSNKSETAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFN LKD+ KT VF LA +RN+ L+EVIP ++ + PSAEL+P+Q D Sbjct: 408 DMAGGFNVLKDVPKTWVFSLAKYRNT---------LSEVIPKKVISRPPSAELKPNQLDT 458 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++ VE + S ++ ++ + +E VR+V L+ +EYKRRQ+PVG +IT Sbjct: 459 DSLPPYAILDAILEGYVERDRSVVSLIEEGFEEEVVRHVISLVDRNEYKRRQSPVGPRIT 518 Query: 540 AKSFGRDRLYPISNKFR 556 A++F +DR YPI++ F Sbjct: 519 ARNFSKDRRYPITSGFS 535 >gi|294649596|ref|ZP_06727014.1| glutamine-dependent NAD(+) synthetase [Acinetobacter haemolyticus ATCC 19194] gi|292824505|gb|EFF83290.1| glutamine-dependent NAD(+) synthetase [Acinetobacter haemolyticus ATCC 19194] Length = 541 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 229/556 (41%), Positives = 322/556 (57%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G+I N K A +Q DLI+F EL GYP EDL+ + + Sbjct: 1 MKNFKIALAQFSPHIGNIDANTQKMVEQANLAKQQQADLIVFPELSTLGYPAEDLILRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ + +K NLPNY Sbjct: 61 LQKRTQKAFAQLSEV---KDIVMVFGFVHQTEDGHRYNSAAVMKDGQVLGIYNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICED+W + N K L + E + LNASPY Sbjct: 118 GVFDEKRYFQEGHQHLVFEYLGHKFGVLICEDVW-SLNTVKQLSQLNVETMLILNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ ++L I+YVNQVGGQD+LIFDG+SF + +LA Q F E Sbjct: 177 VGKPQHRIQTLSELAKQLNLNIVYVNQVGGQDDLIFDGSSFVNNHNGELALQAPSFKEAV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + TE+ +Q + D+ + Y A V+S RDYVQ++ F VI+GLS Sbjct: 237 YFTEYDV----TQKQFKKADAIPALDT----FAEIYQALVMSTRDYVQRSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G + VQ +M+PY YTS S++DA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGADKVQAVMMPYTYTSQMSVKDATEQARRMGVTFGIAEIHPIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L+T NKSEISVGY TLYG Sbjct: 349 SFMQTLFPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSEISVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF+ LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFSVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + S + + Y E V V L+ +EYKRRQ +G +I+ Sbjct: 462 DSLPAYDVLDAILYAYIEEDLSQADIIAKGYEAEVVEKVIRLVDRNEYKRRQGAIGPRIS 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFNRERRYPIVNGW 537 >gi|294340476|emb|CAZ88857.1| Glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) [Thiomonas sp. 3As] Length = 560 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 235/568 (41%), Positives = 324/568 (57%), Gaps = 25/568 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L++A+ Q NP VGD+AGN A+ R +A QG +++ EL ++GYPPEDL+ + +F+ Sbjct: 2 TLQLAVIQCNPTVGDLAGNAAQIARLTRQAYAQGARVVVTPELALTGYPPEDLLLRPAFL 61 Query: 64 QACSSAIDTLKSDTHDGG-AGIVVGFPR------------QDQEGVLNSVVILDAGNIIA 110 QA ++A+ L D D +VVG P Q N+ +L G + A Sbjct: 62 QASAAALKQLAHDLSDLPELALVVGHPLGLAAAEAPRIASTQQAVACNAASLLRGGVVEA 121 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K LPNY F E+R F G GI ICED W + + GA+ Sbjct: 122 TYCKHELPNYQVFDERRYFAPGDQPVVFEAGGTHFGINICEDAWLPHAP-RMARAAGAQV 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L LNASPY+ K +R ++ + + ++ VGGQDE++FDGASF D +L Sbjct: 181 LLVLNASPYHRGKTAERERVMRERCLENGMALVASQMVGGQDEIVFDGASFVLDRAGELV 240 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + F E + + L Q + + + + Y A VL + DY+ KN Sbjct: 241 ARSPQFVEDILRVDVTGGEVLKQ-------TPAHVAPLKSDHAEVYAALVLGVHDYLGKN 293 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +IGLSGG DSAL AIAVDALG + V+ +M+P +YT+ SL+DAA A+ LG +Y Sbjct: 294 GFPGALIGLSGGADSALVLAIAVDALGADKVRAVMMPSQYTAQMSLDDAAEMAQRLGVRY 353 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 DVLPI L F + ++ L E P ENIQ+RIRG +LM LSN+S ++LTT NKSE Sbjct: 354 DVLPITPLFETFRTTLAPLLHEHPGDTTLENIQARIRGTLLMGLSNNSGRIVLTTGNKSE 413 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++GY TLYGDM+GGF +KD+ KT V++LA WRN+H G EVIP I+ ++PS Sbjct: 414 MAMGYATLYGDMAGGFAVIKDVTKTLVWELARWRNAHAAAMG---EAEVIPQRIITRAPS 470 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKR 529 AELR QTDQ+SLPPY +LD I++R +E +E Y V V HLL SEYKR Sbjct: 471 AELRADQTDQDSLPPYDVLDGILQRYMEQDERVETVLAAGYARADVERVVHLLKLSEYKR 530 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFRD 557 RQAP G ++T ++FGRD YPI++KFR+ Sbjct: 531 RQAPPGIRVTHRAFGRDWRYPITSKFRE 558 >gi|254463160|ref|ZP_05076576.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium HTCC2083] gi|206679749|gb|EDZ44236.1| glutamine-dependent NAD(+) synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 557 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 243/558 (43%), Positives = 341/558 (61%), Gaps = 9/558 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +I + QLNP +GDIAGN AKAR A E G DL+ E+FI GY +DLV K + Sbjct: 7 SDRFRITLGQLNPTMGDIAGNAAKARTAWEAGRDAGADLVALPEMFILGYNSQDLVMKPA 66 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 AC +AI+ L + G + +G P + + N+ I G I + K NLPN Sbjct: 67 VQAACLAAIEALAVECA-HGPALAIGGPAVEDGKLFNAYFICRGGKISSKSLKHNLPNED 125 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F SG P + R+G ICED W + + + L++ GAEFL N SPYY Sbjct: 126 VFDEVRIFDSGPLGGPYSVGNTRIGSPICEDAW-HEEVAETLEETGAEFLLVPNGSPYYR 184 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K R + ++ LP+IY+N VGGQD+ +FDG SF + +LA QM F E Sbjct: 185 GKFDVRMNQMVSRVVETGLPLIYLNMVGGQDDQVFDGGSFALNPGGKLAIQMPVFDELIS 244 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 H D + + DD T+ E++ Y CV +LRDY+ K F KV++G+SG Sbjct: 245 ----HVDLTRTDEGWRVDDGEKTIIPGQFEQD--YRVCVTALRDYMSKTGFKKVLLGMSG 298 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL A IAVDALG ENV+ +MLP +YTS SL+DA CA+ +G +Y+ +PI + + Sbjct: 299 GIDSALVATIAVDALGGENVRCVMLPSEYTSQGSLDDAKDCAERIGAEYNFVPISEGRDA 358 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + ++ + + + ENIQSR+RG +LMA+SN +MLLTT NKSE++VGY T+YGD Sbjct: 359 ITNTLAPLFEGLEADVTEENIQSRLRGLLLMAMSNKFGSMLLTTGNKSEVAVGYATIYGD 418 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 MSGG+NP+KD+YK +VF++ WRN + +GP EV+PPSI++K PSAELRP Q D + Sbjct: 419 MSGGYNPIKDMYKVRVFEVCRWRNENHFEWMMGPKGEVVPPSIIDKPPSAELRPDQKDSD 478 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLP YP+LD I++ +V+++ S Y+ V+ +EHLLY SEYKR Q+ GT+++ Sbjct: 479 SLPDYPVLDGILEMLVDDDASVAQCVAAGYDRAVVKKIEHLLYISEYKRFQSAPGTRLSR 538 Query: 541 KSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD+ Sbjct: 539 RAFWLDRRYPIVNRWRDN 556 >gi|254477369|ref|ZP_05090755.1| glutamine-dependent NAD(+) synthetase [Ruegeria sp. R11] gi|214031612|gb|EEB72447.1| glutamine-dependent NAD(+) synthetase [Ruegeria sp. R11] Length = 554 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 245/559 (43%), Positives = 339/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGDIAGN KAR A G DL+ E+FI+GY +DL+ K Sbjct: 1 MADRFRVTLAQLNPTVGDIAGNADKARAAWAAGKEAGADLVALPEMFITGYNTQDLIQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q+ + ++ L +D D G + +G P + N+ +IL G I A K +LPN Sbjct: 61 IFHQSAIAEVERLAADCAD-GPALAIGSPWVRDGNLYNAYLILQGGKISAQVLKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F SG P +R+G ICED W ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRLFQSGPLGGPYAVGGVRIGSPICEDGW-YEDVAETLAETGAEFLLIPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R ++ + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMEVRQNLMVARTVETGLPVIYLNMVGGQDDQVFDGGSFVLNPGGALALQMPVFDEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ W + + AS E DY +LRDY++K F KV++GLS Sbjct: 238 -IQHLDLERTPDGWRAVEGEKASLP----DAWEQDYQVMTYALRDYMRKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AAIAVDALG ENV+ +MLP +YTS SL+DA A AKALG YD +PI + Sbjct: 293 GGVDSALVAAIAVDALGAENVRCVMLPSEYTSQGSLDDAEAVAKALGVHYDYVPISEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ G+ ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFAGLEEGLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI PS+++K PSAELR Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNANHRPWMMGPEGEVIRPSVIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD +++ +V+ E S + ++ E + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDALLEMLVDQEASIADCVAAGFDREVAKRVEHLIYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI+N++RD Sbjct: 533 PRAFWLDRRYPIANRWRDP 551 >gi|71064847|ref|YP_263574.1| putative NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase [Psychrobacter arcticus 273-4] gi|71037832|gb|AAZ18140.1| putative NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase [Psychrobacter arcticus 273-4] Length = 567 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 231/555 (41%), Positives = 322/555 (58%), Gaps = 19/555 (3%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + A+AQ + +VGDI N K R +A QG D+I+F EL + GYPP+DL+ + S Sbjct: 28 DSVTFALAQSHFLVGDIKANAEKMRTLALQAREQGADVIIFPELALLGYPPQDLLLRPSL 87 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 SA+ TL ++VG+P D G NS IL G+ K LPNY Sbjct: 88 SGRIKSALSTLSDI---DDIVMIVGYPHVDHHGTFNSAAILHNGHQKGFYHKQILPNYGV 144 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E+R F G + ++ I +G+LICED+W I + LKKQGA+ + SLNASP+ Sbjct: 145 FDERRYFDKGRNQVLFDYKGITIGLLICEDLWGKGPIAE-LKKQGADLIVSLNASPFEIE 203 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R ++T + +LPI+Y+N VGGQD+L+FDG S +A + F Q + Sbjct: 204 KQDARKTMLTKRSRENNLPIVYLNAVGGQDDLVFDGGSMAIQADGSVAHEASRFMNQLLL 263 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + D + + L E Y A V+ LRDYV + F +I+GLSGG Sbjct: 264 ASFDVKTAKF-------DIQAKAPLSLSRESEMYQALVVGLRDYVNLSGFTGIIVGLSGG 316 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL IAVDALG + V +M+PY+YTS SLEDA A A+ L Y V PI D V Sbjct: 317 IDSALTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIFDAVEGI 376 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + P+ ENIQ+R RG +LMALSN +++TT NKSE++VGY TLYGDM Sbjct: 377 RHTLAPLFNKSPADTTEENIQARARGVVLMALSNKFGHLVITTGNKSELAVGYSTLYGDM 436 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF+ LKD+YK+QV++LAS+RN T VIP ++ + PSAELRP Q DQ+S Sbjct: 437 AGGFDVLKDVYKSQVYKLASYRNRL-------EDTPVIPERVITRPPSAELRPDQKDQDS 489 Query: 483 LPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LP Y +LD I+ ++ + + + D+ ++ + V V ++ SEYKR QAP+GTKI+ K Sbjct: 490 LPDYDVLDGILMSYIDEDMGYQDIVDKGFDADLVAKVIQMVDNSEYKRSQAPIGTKISHK 549 Query: 542 SFGRDRLYPISNKFR 556 +FGR+R YP+ NK+ Sbjct: 550 AFGRERRYPLVNKWS 564 >gi|221638758|ref|YP_002525020.1| NAD synthetase [Rhodobacter sphaeroides KD131] gi|221159539|gb|ACM00519.1| NH(3)-dependent NAD(+) synthetase [Rhodobacter sphaeroides KD131] Length = 564 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 249/558 (44%), Positives = 354/558 (63%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+AGN A ARRA +EA G D++ TE+F++GY +DLV ++ Sbjct: 11 MTERFRLTLAQLNPTVGDLAGNAALARRAWDEARAAGSDMLALTEMFVTGYQTQDLVMRR 70 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ I+ L +D + G I +G P + ++N+ +L+ G + A K +LPN Sbjct: 71 AFVEEAMVTIERLAADCAE-GPAIGIGGPCLEDGRLMNAYWVLEGGRVSARVFKHHLPNA 129 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W ++++C+ L + GAE L N SPY+ Sbjct: 130 EVFDEKRVFSSGEVHGPCRVGPLRIGIPICEDSW-HADVCETLAETGAEILLVPNGSPYH 188 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 189 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 248 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ + A + P EADY+A VLSLRDY++K+ F +V++GLS Sbjct: 249 VHVDFE-----ATDEGWRALPAPIVAQPDL-WEADYHAMVLSLRDYLRKSGFSRVLLGLS 302 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AAIA DALG E V+ +MLP ++TS SLEDAAA A+ALGC+ D + I Sbjct: 303 GGIDSALVAAIAADALGPEAVRCVMLPSRFTSRPSLEDAAAVARALGCRLDEVGIGGPQE 362 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + + GI ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 363 AVGAALGPLFEGTEPGITEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYCTIYG 422 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VFQ+ WRN H GP EVIPP +++K PSAELR Q D+ Sbjct: 423 DMNGGYNPIKDLYKTRVFQMCRWRNGHHRPWMKGPPGEVIPPRVIDKPPSAELREDQKDE 482 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD I++ +V+ EES + + ETV +E L+ GSE+KR Q+ GT++T Sbjct: 483 DSLPPYATLDAILEGLVDREESVAELVARGFERETVARIERLILGSEWKRFQSAPGTRLT 542 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YP+ N++RD Sbjct: 543 RRAFWLDRRYPMVNRWRD 560 >gi|291614117|ref|YP_003524274.1| NAD+ synthetase [Sideroxydans lithotrophicus ES-1] gi|291584229|gb|ADE11887.1| NAD+ synthetase [Sideroxydans lithotrophicus ES-1] Length = 534 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 231/554 (41%), Positives = 325/554 (58%), Gaps = 23/554 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+N VGD+AGN AK + A +QG ++L EL + GYPPEDL+ + F Sbjct: 1 MKIAIAQINCTVGDLAGNAAKIAEYAQRAKKQGAGILLTPELSLCGYPPEDLLLRDGFYH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A+ L G ++VG PR+ NS +L G I+A +K LPN+S F Sbjct: 61 ACDTALRDLALQAQ--GITLIVGHPRKIDRHFYNSASVLRDGKIVATYNKHALPNHSVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G I +R GI IC D+W + + K+ GA+ L LNASPY+ NK Sbjct: 119 EERYFAHGNEPCLIELDGVRFGINICADVW-HEHAAIRAKEAGAQVLLVLNASPYHFNKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R+E + +I L ++Y N VGGQDEL+FDGASF D + +L Q F E + E Sbjct: 178 DTRYETIRERIVDTGLAVVYANMVGGQDELVFDGASFVMDNEGELTHQFPAFDELLGLVE 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + + +++E + Y A + +RDY+ KN F V++GLSGGID Sbjct: 238 FEDGKLV----------PGKCENVVKDEASIYRALCVGVRDYIGKNRFPGVLLGLSGGID 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A+AVDALG + V +M+P YT+ S++D+ + LG +Y+ L I Sbjct: 288 SALTLAVAVDALGADKVLAVMMPSPYTAQMSIDDSREMVRLLGVRYEELDILPTFTALQE 347 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 +S + P+ EN+Q+RIRGN+LMA+SN + +++LTT NKSE++VGY TLYGDM+G Sbjct: 348 TLSPLFKGLPADTTEENLQARIRGNLLMAISNKTGSLVLTTGNKSEMTVGYATLYGDMAG 407 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V++L++WRNS G VIP I+ + PSAEL+P QTDQ+SLP Sbjct: 408 GFAVLKDVSKTWVYRLSNWRNSMGR---------VIPERIITRPPSAELKPDQTDQDSLP 458 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y +LD I+ VE + D Y V V L+ +EYKRRQAPVG +IT + F Sbjct: 459 LYDVLDAIMACYVEKNMNIAQIEDLGYASADVLRVVRLIRIAEYKRRQAPVGVRITDRGF 518 Query: 544 GRDRLYPISNKFRD 557 G+D YPI+ +++D Sbjct: 519 GKDWRYPITVRYQD 532 >gi|299771316|ref|YP_003733342.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter sp. DR1] gi|298701404|gb|ADI91969.1| Probable glutamine-dependent NAD(+) synthetase [Acinetobacter sp. DR1] Length = 541 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 227/556 (40%), Positives = 320/556 (57%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTKKMIEQVNQAKKQNADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQLAEV---KDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LNASPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + +A Q F E Sbjct: 177 VGKPQHRTQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNKDGGIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ E+ + + + + I Y VL+ RDYV+++ F VI+GLS Sbjct: 237 YIAEFDPKNKAFKVTESAPALETFAEI--------YQGLVLATRDYVERSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGAEKVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSVVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L T NKSE+SVGY TLYG Sbjct: 349 SFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLATGNKSELSVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + S + + ++ E V V L+ +EYKRRQ +G +IT Sbjct: 462 DSLPAYDVLDAILYAYIEEDLSQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRIT 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIVNGW 537 >gi|83944365|ref|ZP_00956820.1| NAD(+) synthase [Sulfitobacter sp. EE-36] gi|83844909|gb|EAP82791.1| NAD(+) synthase [Sulfitobacter sp. EE-36] Length = 552 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 240/559 (42%), Positives = 333/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + QLNP VGD+AGN AR A + G DL+ E+F++GY +DLV K+ Sbjct: 1 MTSRFRITLGQLNPTVGDLAGNADLAREAWAQGKEAGADLVALPEMFLAGYNAQDLVMKQ 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++ L +D D G + +G P + + N+ +IL G I + K NLPN Sbjct: 61 AFQLDVMTHLEALAADCAD-GPALAIGAPWVEGAKLYNAYLILRNGKIASRVFKHNLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F S P D R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRIFDSAPLGGPYAVGDTRIGSPICEDAW-HPDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ LP+IY+N VGGQD+ +FDGASF + +LAFQM F Q Sbjct: 179 RGKFETRLNHMVARVVETELPLIYLNMVGGQDDQVFDGASFALNPGGKLAFQMPAFDAQ- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +Q W + + A + E DY V LRDY+ K F KV++GLS Sbjct: 238 -IAHVDLEQTPEGWRVVEGEKAHMP----SDLEQDYRVMVQGLRDYMGKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IAVDALG +NV+ +MLP +YTS SL+DA + AKALGC+YD +PI Sbjct: 293 GGIDSAIVATIAVDALGADNVRCVMLPSEYTSQASLDDAESVAKALGCRYDYVPIAQGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFDGTKPDLTEENIQSRLRGLLLMAVSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KD+YKT+VF WRN + +GP EVI P I++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDMYKTRVFDSCRWRNENHRDWMMGPEGEVIAPRIIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD ++ +V+++ S + ++ E + VEHLLY SEYKR Q+ G ++T Sbjct: 473 DSLPDYPDLDAMLTILVDDDGSIADCVAAGFDREVAKKVEHLLYISEYKRFQSAPGPRLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 +F DR YPI N++RD Sbjct: 533 KGAFWLDRRYPIVNRWRDP 551 >gi|332557776|ref|ZP_08412098.1| NAD synthetase [Rhodobacter sphaeroides WS8N] gi|332275488|gb|EGJ20803.1| NAD synthetase [Rhodobacter sphaeroides WS8N] Length = 554 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 250/558 (44%), Positives = 353/558 (63%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ +AQLNP VGD+AGN A ARRA +EA G D++ TE+F++GY +DLV ++ Sbjct: 1 MTERFRLTLAQLNPTVGDLAGNAALARRAWDEARAAGSDMLALTEMFVTGYQTQDLVMRR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ + I+ L +D + G I +G P + ++N +LD G + A K +LPN Sbjct: 61 AFVEEAMATIERLAADCAE-GPAIGIGGPCLEGGRLMNVYWVLDGGRVSARVFKHHLPNA 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P +R+GI ICED W ++++C+ L + GAE L N SPY+ Sbjct: 120 EVFDEKRVFSSGEVHGPCRVGPLRIGIPICEDSW-HADVCETLAETGAEILLVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP++Y+N VGGQD+ +FDGASF + +L Q+ F E Sbjct: 179 REKLDVRVNLMVTRVVETGLPLVYLNMVGGQDDQVFDGASFVLNPHGRLMAQLPAFEEAL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ + A + P EADY+A VLSLRDY+ K+ F +V++GLS Sbjct: 239 VHVDFE-----AADEGWRALPAPIVAQPDL-WEADYHAMVLSLRDYLGKSGFSRVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AAIA DALG E V+ +MLP ++TS SLEDAAA A+ALGC+ D + I Sbjct: 293 GGIDSALVAAIAADALGPEAVRCVMLPSRFTSRASLEDAAAVARALGCRLDEVGIGGPQE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + + GI ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AVGAALGPLFEGTEPGITEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYCTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VFQ+ WRN H GP EVIPP +++K PSAELR Q D+ Sbjct: 413 DMNGGYNPIKDLYKTRVFQMCRWRNGHHRPWMKGPEGEVIPPRVIDKPPSAELREDQKDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD I++ +V+ EES + + ETV +E L+ GSE+KR Q+ GT++T Sbjct: 473 DSLPPYATLDAILEGLVDREESVAELVARGFERETVARIERLILGSEWKRFQSAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YP+ N++RD Sbjct: 533 RRAFWLDRRYPMVNRWRD 550 >gi|83953407|ref|ZP_00962129.1| NAD(+) synthase [Sulfitobacter sp. NAS-14.1] gi|83842375|gb|EAP81543.1| NAD(+) synthase [Sulfitobacter sp. NAS-14.1] Length = 552 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 241/559 (43%), Positives = 332/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + QLNP VGD+AGN AR A + G DL+ E+F++GY +DLV K+ Sbjct: 1 MTSRFRITLGQLNPTVGDLAGNADLAREAWAQGKEAGADLVALPEMFLAGYNAQDLVMKQ 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++ L +D D G + +G P + + N+ +IL G I + K NLPN Sbjct: 61 AFQLDVMTHLEALAADCAD-GPALAIGAPWVEGAKLYNAYLILRNGKIASRVFKHNLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F S P D R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRIFDSAPLGGPYAVGDTRIGSPICEDAW-HPDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ LP+IY+N VGGQD+ +FDGASF + +LAFQM F Q Sbjct: 179 RGKFETRLNHMVARVVETELPLIYLNMVGGQDDQVFDGASFALNPGGKLAFQMPAFDAQ- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +Q W + + A + E DY V LRDY+ K F KV++GLS Sbjct: 238 -IAHVDLEQTPEGWRVVEGEKAHMP----SDLEQDYRVMVQGLRDYMGKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IAVDALG +NV+ +MLP +YTS SL+DA A AKALGC+YD +PI Sbjct: 293 GGIDSAIVATIAVDALGADNVRCVMLPSEYTSQASLDDAEAVAKALGCRYDYVPIAQGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITDTLAPLFEGTKPDLTEENIQSRLRGLLLMAVSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KD+YKT+VF WRN + GP EVI P I++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDMYKTRVFDSCRWRNENHRDWMKGPEGEVIAPRIIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD ++ +V+++ S + ++ E + VEHLLY SEYKR Q+ G ++T Sbjct: 473 DSLPDYPDLDAMLTILVDDDGSIADCVAAGFDREVAKKVEHLLYISEYKRFQSAPGPRLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 +F DR YPI N++RD Sbjct: 533 KGAFWLDRRYPIVNRWRDP 551 >gi|262280051|ref|ZP_06057836.1| glutamine-dependent NAD+ synthetase [Acinetobacter calcoaceticus RUH2202] gi|262260402|gb|EEY79135.1| glutamine-dependent NAD+ synthetase [Acinetobacter calcoaceticus RUH2202] Length = 541 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 225/556 (40%), Positives = 321/556 (57%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTKKMIEQVNQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQLAEV---KDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LNASPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRTQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNKNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ E+ + + + + + I Y V++ RDYV+++ F VI+GLS Sbjct: 237 YIAEFDHKNKSFKVTESAPALETFAEI--------YQGLVMATRDYVERSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGAEKVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSVVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L T NKSE+SVGY TLYG Sbjct: 349 SFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLATGNKSELSVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + + + ++ E V V L+ +EYKRRQ +G +IT Sbjct: 462 DSLPAYDVLDAILYAYIEEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRIT 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIINGW 537 >gi|163857180|ref|YP_001631478.1| NAD synthetase [Bordetella petrii DSM 12804] gi|163260908|emb|CAP43210.1| putative NAD synthetase [Bordetella petrii] Length = 544 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 229/560 (40%), Positives = 327/560 (58%), Gaps = 18/560 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++AIAQ+N VGDI GN A+ ++ A++QG D+++ EL ++GYPPEDL+ + Sbjct: 1 MSAARVAIAQINACVGDIKGNAARVLQSAHSAHQQGADVLVTPELVLTGYPPEDLLLRPH 60 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F++ +A+D L+ DT G ++VG + N+ +L G ++ V K LPNY Sbjct: 61 FVETQEAALDQLRRDTAGLAGLHLLVGHVLARGGKLYNAATVLCEGRVVGVYCKRELPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F E+R F + +R G+ ICED+W + + GA+ L NASPY Sbjct: 121 SVFDEQRYFAEADQPLVFEVKGVRFGVNICEDMW-FERAPRAAAQAGAQVLLVPNASPYN 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R + ++Y N VGGQDEL+FDGASF D Q Q A ++ ++E Sbjct: 180 TGKQDERLRVARRCAQDTGCAVVYANLVGGQDELVFDGASFALDAQGQPAARLPDYTEGV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E + + +D P EE +NA VLS+RDY+ KN F IIGLS Sbjct: 240 DVVEVDAAGAVRPLSRHAD------VAPYCLEEQVWNALVLSVRDYLGKNGFPGAIIGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A+AVDALG NV+T+M+P +YT+ S DA A+ LG ++D + I V+ Sbjct: 294 GGIDSAVVLAVAVDALGAANVRTVMMPSRYTADISQTDAGDMAQRLGVRHDDIAIGPAVD 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++++ P ENIQ+R+RG +LMALSN + ++LTT NKSE++ GY TLYG Sbjct: 354 AFEAMLAPQFAGLPVDATEENIQARVRGTLLMALSNKTGHLVLTTGNKSELTTGYCTLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF +KD+ KT V++LA WRN EVIP I+ + PSAELRP QTDQ Sbjct: 414 DMAGGFAVIKDVPKTLVYRLAEWRNREH---------EVIPRRIITRPPSAELRPDQTDQ 464 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I++R +E +S + V V L+ +EYKRRQAP G +IT Sbjct: 465 DSLPPYDILDGIMERYMERNQSAAEIVAAGFPRPAVEQVVRLIRINEYKRRQAPPGPRIT 524 Query: 540 AKSFGRDRLYPISNKFRDHI 559 ++FGRD YP++N FR+ + Sbjct: 525 PRAFGRDWRYPVTNGFRETV 544 >gi|93005127|ref|YP_579564.1| NAD+ synthetase [Psychrobacter cryohalolentis K5] gi|92392805|gb|ABE74080.1| NAD+ synthetase [Psychrobacter cryohalolentis K5] Length = 567 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 229/555 (41%), Positives = 323/555 (58%), Gaps = 19/555 (3%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 + A+AQ + +VGDI N K R +A QG D+I+F EL + GYPP+DL+ + S Sbjct: 28 DSVTFALAQSHFLVGDIKANAEKMRTLALQAREQGADVIIFPELALLGYPPQDLLLRPSL 87 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 SA+ TL ++VG+P D G NS IL G+ K LPNY Sbjct: 88 SGRIKSALSTLSDI---DDIVMIVGYPHVDHHGTFNSAAILHNGHQKGFYHKQILPNYGV 144 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E+R F G + ++ I +G+LICED+W+ I + LKKQGA+ + SLNASP+ Sbjct: 145 FDERRYFDKGRNQVLFDYKGITIGLLICEDLWEKGPIAE-LKKQGADLIVSLNASPFEIE 203 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R ++ + +LPI+Y+N VGGQD+L+FDG S +A + F Q + Sbjct: 204 KQDTRKTMLAKRSRENNLPIVYLNAVGGQDDLVFDGGSMAIQADGSVAHEASRFMNQLLL 263 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + D+ + + L E Y A V+ LRDYV + F +I+GLSGG Sbjct: 264 ASFD-------AKTAKFDTQAKAPLSLSRESEMYQALVVGLRDYVNLSGFTGIIVGLSGG 316 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL IAVDALG + V +M+PY+YTS SLEDA A A+ L Y V PI D V Sbjct: 317 IDSALTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIFDAVEGI 376 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + P+ ENIQ+R RG +LMALSN +++TT NKSE++VGY TLYGDM Sbjct: 377 RHTLAPLFNKSPADTTEENIQARARGVVLMALSNKFGHLVITTGNKSELAVGYSTLYGDM 436 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF+ LKD+YK+QV++LAS+RN T VIP ++ + PSAELRP Q DQ+S Sbjct: 437 AGGFDVLKDVYKSQVYKLASYRNRL-------EDTPVIPERVITRPPSAELRPDQKDQDS 489 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LP Y +LD I+ ++ + + + ++ ++ + V V ++ SEYKR QAP+GTKI+ K Sbjct: 490 LPDYDVLDGILMSYIDEDMGYQDIINKGFDADLVAKVIQMVDNSEYKRSQAPIGTKISHK 549 Query: 542 SFGRDRLYPISNKFR 556 +FGR+R YP+ NK+ Sbjct: 550 AFGRERRYPLVNKWS 564 >gi|186685760|ref|YP_001868956.1| NAD synthetase [Nostoc punctiforme PCC 73102] gi|186468212|gb|ACC84013.1| NAD+ synthetase [Nostoc punctiforme PCC 73102] Length = 572 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 219/569 (38%), Positives = 319/569 (56%), Gaps = 35/569 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP +GD+ N K A + A G L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQINPTIGDLPLNAQKILEAAQRAASSGARLLLTPELSLCGYPPRDLLLNPSFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 A ++ L D ++VG Q+ + + NS+ +L+ G + V K L Sbjct: 61 AMGISLQNLAQDLPP-NLAVLVGTVEQNLNASISGGKTLFNSMALLENGKVKQVFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQG 167 P Y F E+R F G + +I +G+ ICED+W + N L G Sbjct: 120 PTYDVFDERRYFEPGLQANYFTLDNIDIGVTICEDLWNDEEFWGKRSYTVNPIADLAILG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K + R ++ P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDLIVNLSASPYTVGKQQLRETMLRHSAVRFQQPMIYTNQVGGNDDLIFDGHSFALNRQG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + + F + E+ Q+ Q AS E+E + A VL +RDY Sbjct: 240 EIISRARGFDTDLVVVEFDETQRDFQL-------ASVEPAYQSEDEEIWQALVLGVRDYA 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +K F KV++GLSGGIDSA+ AAIA ALGKENV +++P Y+S S+ DA A AK LG Sbjct: 293 RKCRFSKVVLGLSGGIDSAIVAAIATAALGKENVLGVLMPSPYSSEHSISDALALAKNLG 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K ++LPI +L+ F + G+ ENIQSRIRGN+LMA++N +LL+T N Sbjct: 353 IKTNLLPIGELMQGFDQTLGDLFAGTEFGLAEENIQSRIRGNLLMAIANKFGYLLLSTGN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V+ L W N + E+IP ++L K Sbjct: 413 KSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCHWLNRN---------NEIIPQNVLTK 463 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSE 526 +PSAEL+P Q DQ+SLPPY +LDDI++R++ N +S + ++ V V ++ +E Sbjct: 464 APSAELKPGQVDQDSLPPYEVLDDILQRLIHNHQSAVQIVAAGHDAVIVDRVIQMVARAE 523 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G KIT ++FG PI++ + Sbjct: 524 FKRRQAPPGLKITDRAFGTGWRMPIASNW 552 >gi|206890265|ref|YP_002248293.1| NAD+ synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742203|gb|ACI21260.1| NAD+ synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 571 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 216/585 (36%), Positives = 331/585 (56%), Gaps = 43/585 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +KK+++A+ Q+NP+VGDI GN +K +E+A ++ D+I+F EL ++GY PEDL+F S Sbjct: 1 MKKIRLALCQINPIVGDIEGNFSKILSFKEKAVKEKADIIVFPELILTGYTPEDLLFYPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ + A++ L + D +++G P ++++ + NS VIL +I KI LPNYS Sbjct: 61 FIKKANEALNKLIENVKDF--VMILGLPVKEED-LYNSAVILAEQKVIDTYHKIYLPNYS 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F SG + + G+ ICEDI+ + GAE + +++ASP+Y Sbjct: 118 VFDEMRYFKSGKRASVYEYSGVLFGVNICEDIFHPTLPSPIQASSGAELIINISASPFYA 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +K+ +++ + + + I Y+N VGGQDE++FDG S ++ K F E Sbjct: 178 GKFEKKLRMLSTRAYDMGVFIAYLNTVGGQDEIVFDGRSMVISPSGEIITMGKAFEEDFI 237 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQ----------------------------EEE 273 + + ++ + + + EEE Sbjct: 238 VVDLDLEEVTRVRMREPKIRWESEFERAEIIKISGEQKKSLAVQSLQPSAFSLKILSEEE 297 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 + A LRDYV+KN F +V +GLSGGIDS+ A +A DALG + V + +P +YTS Sbjct: 298 EIFKALKTGLRDYVEKNGFSRVCLGLSGGIDSSFVALVATDALGSDRVTGVFMPSRYTSR 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 +S ED K LG + + I ++ + ++ + P ENIQSRIRGNILMA Sbjct: 358 ESKEDVYELVKNLGIELIEISIDEIFEEYLRRLADTFKGLPEDTTEENIQSRIRGNILMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 +SN +++TT NKSE++VGY TLYGDM+GGF +KD+YKTQV+++A W + Sbjct: 418 ISNKFGWLVITTGNKSEMAVGYATLYGDMAGGFAVIKDVYKTQVYRVAKWASR------- 470 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYND 512 + IP I +K PSAELRP QTDQ++LPPY ILD+I+KR +E S +Q ++ Sbjct: 471 ----DRIPERIFKKPPSAELRPGQTDQDTLPPYEILDEILKRHIEKCMSEEEIVEQGFDR 526 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +TVR V ++ +E+KRRQ+P G KI+ S G+D +PI+N+F + Sbjct: 527 DTVRKVLRMVKKAEFKRRQSPPGIKISPVSLGKDWRFPITNRFGE 571 >gi|212710640|ref|ZP_03318768.1| hypothetical protein PROVALCAL_01706 [Providencia alcalifaciens DSM 30120] gi|212686721|gb|EEB46249.1| hypothetical protein PROVALCAL_01706 [Providencia alcalifaciens DSM 30120] Length = 540 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 223/556 (40%), Positives = 336/556 (60%), Gaps = 23/556 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL I++AQLN +VGDI GN + + EE + D+++F+EL ++GY PEDL+F+ Sbjct: 1 MSRKLNISLAQLNWLVGDIEGNCERMLQTVEE-QGKNTDIVMFSELALTGYSPEDLLFRH 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F + C++ + L+ + GI+VG P ++ + N++ G ++A K LPNY Sbjct: 60 DFEERCTAQLKRLQQASSQ--CGIIVGHPWYEENEIYNALSFFYQGKLLARYFKQELPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F + + F+ +LG+LICEDIW + +K GA+ + ++NASPY Sbjct: 118 GVFDEPRYFTAAEKTCVVEFKGYQLGLLICEDIWYD-EPIDAVKGAGADLVLTINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R +++ LPI+Y+NQVGGQDEL+FDG S + + +QM F+EQ Sbjct: 177 LNKEHIRSDLLVEHAQRTGLPIVYLNQVGGQDELVFDGGSKVLANKGKQVYQMVEFAEQV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + +++ + S + Y A VL+ RDY+ KN F+ I+GLS Sbjct: 237 ATVTFEDVKLVTEQPKQPEAS---------QIAQVYQALVLATRDYINKNGFNGAILGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIA DA+GK+ VQ +M+P++YTS S+ DA A+ LG ++D++ I + + Sbjct: 288 GGIDSGLTVAIAADAIGKDRVQAVMMPFRYTSEMSIHDAKEQAELLGVEFDIVSIEPMFD 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 348 AFMAQLQPMFEGTQPDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 408 DMAGGFDVLKDVPKTLVFELAKYRNT---------ISPAIPQRVIDRPPSAELAPGQLDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I+ VE + S + + ++ E VR V L+ +EYKRRQAPVG +IT Sbjct: 459 DSLPPYDVLDAILDGYVEKDLSVADLIKLGFDREIVRKVVRLVDINEYKRRQAPVGPRIT 518 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 519 MRNFGKDRRYPITSGF 534 >gi|145588869|ref|YP_001155466.1| NAD+ synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047275|gb|ABP33902.1| NAD+ synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 539 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 227/557 (40%), Positives = 326/557 (58%), Gaps = 21/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KIA+AQ+NP++GD+ GN +A ++A +QG L++ EL ++GYPPEDL+ + + Sbjct: 1 MSAQKIALAQINPLLGDLGGNAQLILKASQDAFKQGAKLVVTPELSLTGYPPEDLLLRPA 60 Query: 62 FIQACSSAIDTL-KSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 FIQA +D L + T ++VG P+Q G+ N +L G +IA K LPN+ Sbjct: 61 FIQASERELDLLMQELTAYPDLTVIVGHPKQTDAGLQNYASVLRNGKVIAGYAKQELPNH 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F+ G I G+++CED W + K GA+ L NASPY+ Sbjct: 121 EVFDEVRYFVPGNRACVFECAGIHYGLILCEDAW-HPGPAKQSHAAGAQILLVPNASPYH 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R +++ I H+P++YVN VGGQDEL+FDG SF + ++ + F Sbjct: 180 LKKEALRIDVLRSHIHKTHMPLVYVNSVGGQDELVFDGGSFALNATGEVVMALPQFETAL 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E QL + + +P E Y A VL +RDYV KN F VIIGLS Sbjct: 240 GYVEVSSAGQLKK---------GVIALPQSVEAQAYQALVLGVRDYVTKNRFPGVIIGLS 290 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A+AVDALG + V+ +M+ +YT+ S DA A LG +YD +PI V+ Sbjct: 291 GGVDSALVLAVAVDALGADKVRAVMMASRYTADISWIDARELADNLGVRYDEIPISGPVD 350 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 +++ + ENIQ+R+RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 351 ALEQSLAEQFKGMKVDATEENIQARVRGTMLMALSNKTGRLVLTTGNKSEMAVGYCTLYG 410 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF +KD+ KT V++L ++RNS + VIP IL ++PSAELRP QTDQ Sbjct: 411 DMAGGFAVIKDIAKTLVYRLCAYRNS---------IKPVIPERILTRAPSAELRPDQTDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I++R +E +S ++ E+V V L+ +EYKRRQAP G ++T Sbjct: 462 DSLPSYEVLDGIVERYMEQNQSIEEMIAAGFDAESVEKVTRLIKLNEYKRRQAPPGVRVT 521 Query: 540 AKSFGRDRLYPISNKFR 556 ++FGRD YPI+++FR Sbjct: 522 TRAFGRDWRYPITSQFR 538 >gi|220933990|ref|YP_002512889.1| NAD+ synthetase [Thioalkalivibrio sp. HL-EbGR7] gi|219995300|gb|ACL71902.1| NAD+ synthetase [Thioalkalivibrio sp. HL-EbGR7] Length = 546 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 231/562 (41%), Positives = 334/562 (59%), Gaps = 18/562 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M LKIA+AQ++ +VGD+ GN + R +A + G DL+LF EL I+GYPPEDL+ + Sbjct: 1 MTDTLKIALAQVDLLVGDVEGNAERIRDWVFKARDELGADLVLFPELAITGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S A+ L + G +V+G P QD+ G+ NS ++L G I A DK LPN Sbjct: 61 ASLHARVERALHRLAHEVR--GIDVVLGAPMQDERGLHNSALLLRDGAIAARYDKQILPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 YS F EKR F+ G+ I R + LG+ +CEDIW+ ++ GA + ++NASPY Sbjct: 119 YSVFDEKRYFVPGHGACVIQVRGVPLGLTVCEDIWQP-EPAARAREAGARLILNINASPY 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K ++R + + ++ L ++Y+N VGGQDEL+FDG S G ++ + + E Sbjct: 178 HRGKREERLQTLRARVRETGLSVLYLNLVGGQDELVFDGQSLVMGGDGEVRQSLPAWHEA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + + + + A E Y A V +RDYV KN F ++GL Sbjct: 238 LSLVSVDCPAGDAPLQPRAGEQAPLA----DEAAELYQALVTGVRDYVSKNGFRGAVLGL 293 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL IAVDALG + V+ +M+PY+YT+ S+EDA + A++LG +Y +PI +V Sbjct: 294 SGGIDSALTLCIAVDALGADAVEAVMMPYRYTASMSVEDARSQAQSLGVRYREIPIEPMV 353 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + ++ + P ENIQ+R RG ILMA+SN + MLLTT NKSE++VGY TLY Sbjct: 354 EAFMTGLAPEFEGLPRDTTEENIQARCRGVILMAISNKTGRMLLTTGNKSEMAVGYATLY 413 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF PLKD+ K VF+LA +RN+ L IP ++E+ PSAEL P Q D Sbjct: 414 GDMAGGFAPLKDVSKLWVFRLAEYRNT---------LGAAIPRRVIERPPSAELAPGQQD 464 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLPPY +LD I++R VE ++S +++ TV+ V L+ +EYKRRQAP G ++ Sbjct: 465 SDSLPPYEVLDPILERFVEQDQSVEQIVRAGFDEATVQRVATLVLRNEYKRRQAPPGVRV 524 Query: 539 TAKSFGRDRLYPISNKFRDHIS 560 T + FG+DR YPI++ + +S Sbjct: 525 TRRGFGKDRRYPITSGYGRLLS 546 >gi|325121187|gb|ADY80710.1| putative glutamine-dependent NAD(+) synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 541 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 226/556 (40%), Positives = 321/556 (57%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQVNQAKKQDADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQLAEV---KDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTALVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRIQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDI 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ E+ D +L + + + I Y V++ RDYV+++ F VI+GLS Sbjct: 237 YIAEFDRDTKLYKVTESAPALETFAEI--------YQGLVMATRDYVERSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGAEKVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L T NKSE+SVGY TLYG Sbjct: 349 SFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLATGNKSELSVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + + + ++ E V V L+ +EYKRRQ +G +IT Sbjct: 462 DSLPAYDVLDAILYAYIEEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRIT 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIVNGW 537 >gi|94501751|ref|ZP_01308265.1| NAD synthase [Oceanobacter sp. RED65] gi|94426151|gb|EAT11145.1| NAD synthase [Oceanobacter sp. RED65] Length = 543 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 223/558 (39%), Positives = 335/558 (60%), Gaps = 20/558 (3%) Query: 1 MLKK-LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M ++ L + +AQLN VVGDI N K + +++ +G+D+++F EL ++GYPPEDL+ + Sbjct: 1 MSEQSLSVCLAQLNLVVGDIQSNTQKVLASAKQSVEKGVDVVIFPELTLTGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S A+ ++ +V+G+P+ G+ N +++ G ++A K +LPN Sbjct: 61 PSLKLRVEQALQEIEEAA--LPITLVIGYPKVTASGLQNMAGVIENGRLVAEYAKQHLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + F EKR FI G + + + + I ICEDIW+ I K+ GA+ + +LNASP+ Sbjct: 119 FQVFDEKRYFIEGTQPCVVQIKGLPVAISICEDIWQ-KGIMTQAKQAGAKLMLNLNASPF 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + +K R ++ + +PI+YVN VGGQDEL+FDG S D Q + + + E Sbjct: 178 HIDKPLHREALLKERALEGAMPIVYVNLVGGQDELVFDGGSVVVDQQGNVKSRAITYDEA 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + E D + ++ ++ Y+A VL +DYV KN F V++GL Sbjct: 238 QPVVELAID------DGAVSSIDGKTEPHREKLDSIYSALVLGTKDYVNKNGFKGVVLGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL A+AVDALGKE VQ IM+P+KYTS SL DA A LG +Y V+PI + Sbjct: 292 SGGIDSALTLAVAVDALGKERVQAIMMPFKYTSQMSLHDAEDEANRLGVEYKVMPIEPMF 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + F ++ + EN+QSR RG +LMA+SN +++LTT NKSE++VGY TLY Sbjct: 352 DAFMGTLADEFEGTKVDTTEENLQSRCRGVLLMAMSNKKGSLVLTTGNKSEMAVGYATLY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+ LKD++KT VF+L+ +RN+ L EVIPP ++ + PSAEL P Q D Sbjct: 412 GDMAGGYGVLKDVFKTLVFELSKYRNT---------LGEVIPPRVISRPPSAELAPDQVD 462 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLP YP+LD+I++ +E ++S + + ++ V V L+ +EYKRRQAPVG ++ Sbjct: 463 EDSLPAYPVLDEILRLYIEEDQSAQAIIAKGFKEDEVNRVIRLVDINEYKRRQAPVGVRL 522 Query: 539 TAKSFGRDRLYPISNKFR 556 T + FGRDR YPI+N +R Sbjct: 523 TQRGFGRDRRYPITNGWR 540 >gi|85703661|ref|ZP_01034765.1| NAD(+) synthase [Roseovarius sp. 217] gi|85672589|gb|EAQ27446.1| NAD(+) synthase [Roseovarius sp. 217] Length = 555 Score = 604 bits (1557), Expect = e-170, Method: Composition-based stats. Identities = 236/562 (41%), Positives = 337/562 (59%), Gaps = 9/562 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN AR A +E G DL+ E+FI+GY +DLV K Sbjct: 1 MGDRFRLTLAQLNPTVGDLAGNARMARAAWQEGRAAGADLVALPEMFITGYNTQDLVRKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + QA + I+ L D + G + +G P D G+ N+ +L G + A K +LPN Sbjct: 61 ALHQAAIATIEALARDCAE-GPALAIGGPALDGVGLFNAYYVLQGGAVRARVLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + SG P +R+G ICED W + ++ + L + GAE L N SP+Y Sbjct: 120 TVFDEVRLYESGPVAGPYTVAGVRIGSPICEDAW-HEDVAETLAETGAEILLVPNGSPHY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK+ R ++ ++ LP+IY+N VGGQD+ +FDG SF + LA Q+ F E Sbjct: 179 RNKMDLRQNMMVARVIETGLPLIYLNMVGGQDDQMFDGGSFVLNPGGALAVQLPMFQEAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + + + E DY A VLSLRDY++K+ KV++GLS Sbjct: 239 VHVDLERGPEGWRA------APGVLAHLPDDLEQDYTAMVLSLRDYLRKSGLSKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ A IAVDA+G +NV+ +MLP ++TSP+SLEDA A A+ LGC+YD +PI Sbjct: 293 GGVDSAIVATIAVDAVGAKNVRCVMLPSEFTSPESLEDAKAVAENLGCRYDFVPIDAGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AITATLAPLFDGIEPDLTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT++F++ WRN+ +G VIP +++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRLFEICRWRNAQHRDWMMGGAGVVIPARVIDKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I+ +V+ + S + Y + VEHLLY SEYKR QA GT+++ Sbjct: 473 DSLPDYPVLDGILDILVDQDGSISDCVAAGYTLGDAKRVEHLLYISEYKRFQAAPGTRLS 532 Query: 540 AKSFGRDRLYPISNKFRDHISE 561 ++F DR YPI N++RD E Sbjct: 533 HRAFWLDRRYPIVNRWRDGSGE 554 >gi|300087867|ref|YP_003758389.1| NAD+ synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527600|gb|ADJ26068.1| NAD+ synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 541 Score = 604 bits (1557), Expect = e-170, Method: Composition-based stats. Identities = 217/557 (38%), Positives = 323/557 (57%), Gaps = 20/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++A+AQ+N VGD GN++ RR ++A G L++F E+ +SGYPPEDL+ K S Sbjct: 1 MNDIRLALAQINTTVGDYVGNVSLIRRYLKDAADGGAGLVVFPEMAVSGYPPEDLLHKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+A A+ + G VVGF +G+ N+ ++ G I + K +LPNY Sbjct: 61 FIEAGQQALAEVAGTV--GDLTAVVGFVDTAPDGLYNAAAVIHQGEIRHIYHKRHLPNYG 118 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F G +RLG+ +CEDIW++ + GA+ + +++ASP++ Sbjct: 119 VFDEQRYFKPGDDCPVFEGTGGLRLGVNVCEDIWRDDGPMVVQSRDGADIIINISASPFH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ + + +P+++ N VGGQDEL+FDGAS D ++ + + F E+ Sbjct: 179 RGKYHQRERMLKARAAGGGVPVVFCNLVGGQDELVFDGASVVIDAGGRVLGRARQFEEEL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + D D + E + Y A V RDYV KN F +V++GLS Sbjct: 239 LFVDLAGDG---------RDGRGIVAELPDEYDEIYRALVTGTRDYVMKNAFRQVVVGLS 289 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS+L AA+AVDALG V +++P ++++P+S AA A LG + + +PI Sbjct: 290 GGIDSSLVAAVAVDALGASAVNGLIMPSRFSAPESAAYAAELADNLGIRVNEIPIEGPYA 349 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + I ENIQ+RIRGN+LMALSN ++L T NKSE + GY TLYG Sbjct: 350 AYLESLTGVFTGQAPDITEENIQARIRGNLLMALSNKFGWLVLNTGNKSETATGYTTLYG 409 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF +KD+ KT V+ L +RN + +IP SI++++PSAELRP Q D Sbjct: 410 DMAGGFAVIKDVPKTLVYDLCRYRNRTAGRT-------LIPQSIIDRAPSAELRPGQKDA 462 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ++D I++ VE + + ++ ETVR + L+ GSEYKRRQAP G KIT Sbjct: 463 DSLPPYDVMDPILEAYVEQDLGVADIIGLGHDPETVRRIAGLVDGSEYKRRQAPPGVKIT 522 Query: 540 AKSFGRDRLYPISNKFR 556 K+FGRDR PI+NKFR Sbjct: 523 PKAFGRDRRLPITNKFR 539 >gi|319793214|ref|YP_004154854.1| NAD+ synthetase [Variovorax paradoxus EPS] gi|315595677|gb|ADU36743.1| NAD+ synthetase [Variovorax paradoxus EPS] Length = 565 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 232/569 (40%), Positives = 318/569 (55%), Gaps = 17/569 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 LK+AIAQLN VVGD+ GN K A E++ QG L+L EL I+GY EDL + +F Sbjct: 2 TLKLAIAQLNFVVGDVDGNARKIVDAARESHAQGARLLLTPELSIAGYAAEDLFLRPAFT 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFP----RQDQEG----VLNSVVILDAGNIIAVRDK 114 +AC A+ + + D +VVG P + + N+ ++ G I+ K Sbjct: 62 EACDDAVKGIAAALADLKDMVVVVGHPTGGSLRSRSVAVQMRHNAASVIKEGRILDTYAK 121 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 LPNY F E+R F G + +G+LICED W + + + GAE L + Sbjct: 122 RELPNYQVFDERRYFTPGQGTCVFEAGGVSVGLLICEDAWFDQ-PAELARAAGAEVLAVI 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ K +R + + V LP++Y + VGGQDE++FDGASF LA Q++ Sbjct: 181 NASPYHVGKEGERVARMADRAHAVGLPLVYAHLVGGQDEVVFDGASFALQAGGALAMQVE 240 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E+ + + + P E ++A VL +RDY+ KN F Sbjct: 241 SFQEKLVFAQLER---TPEGGVGFVVEPGAVAAPRDAEAQLWDALVLGVRDYIGKNGFPS 297 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 I+GLSGGIDSAL AIAVDALGK+ V+ +M+P YT+ S DA A LG +YD + Sbjct: 298 AILGLSGGIDSALVLAIAVDALGKDKVRAVMMPSPYTADISWIDAREMANRLGVRYDEIS 357 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I F +++ ++ P ENIQ+RIRG +LMALSN +++LTT NKSE++ G Sbjct: 358 IKHTFESFKGALAEEFKDRPEDTAEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMATG 417 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGF +KDL KT VF LA WRN+H G IP I+ + PSAELR Sbjct: 418 YCTLYGDMAGGFAVIKDLLKTTVFALARWRNAHDP---YGTGAAPIPDRIITRPPSAELR 474 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 P QTDQ+SLPPY ILD I+ R ++++E Y V V L+ +EYKRRQAP Sbjct: 475 PDQTDQDSLPPYDILDGILARYMQDDEGIDEIIAAGYERAVVERVARLIKVNEYKRRQAP 534 Query: 534 VGTKITAKSFGRDRLYPISNKFRDHISEE 562 VG ++T +SFG+D YPI++KF + Sbjct: 535 VGIRVTHRSFGKDWRYPITSKFNETAGAR 563 >gi|255318866|ref|ZP_05360092.1| glutamine-dependent NAD+ synthetase [Acinetobacter radioresistens SK82] gi|262378876|ref|ZP_06072033.1| glutamine-dependent NAD+ synthetase [Acinetobacter radioresistens SH164] gi|255304122|gb|EET83313.1| glutamine-dependent NAD+ synthetase [Acinetobacter radioresistens SK82] gi|262300161|gb|EEY88073.1| glutamine-dependent NAD+ synthetase [Acinetobacter radioresistens SH164] Length = 541 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 222/557 (39%), Positives = 321/557 (57%), Gaps = 21/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P G+ N K EA +Q D+I+F EL GY EDL+ + S Sbjct: 1 MKSFKIALAQFSPHTGNFELNAQKMVEQANEAKKQRADIIVFPELCTVGYSAEDLLLRPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + + L +V GF Q + G NS ++ G ++ V +K NLPNY Sbjct: 61 LSKRTQKVFEILGQV---KDIVMVFGFVNQAETGQRYNSAAVVKDGQVLGVYNKQNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F SG + + + +LICEDIW + N + L + A+ + LN+SPY Sbjct: 118 SVFDEKRYFASGNQQLVFEYMEHKFAVLICEDIW-SINTVQQLTQLKAQTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + + + ++ ++YVNQV GQD++IFDG+SF + Q +L + F E Sbjct: 177 VGKPQHRIQTMQQLVKQLNFNLVYVNQVCGQDDIIFDGSSFVLNPQGELVTRAPSFQECL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E+ D+ ++ + + I Y A V++ RDY+Q++ F VI+GLS Sbjct: 237 HYAEYSADKDAFIVQEIAPELDTMAEI--------YQALVMATRDYIQRSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G + VQ +M+PY YT+ S+EDAAA AK +G + + I+ +VN Sbjct: 289 GGIDSALTLAIAVDAIGADKVQAVMMPYTYTAQISVEDAAAQAKTMGVTFGIAEINPIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LMALSN ++L+T NKSE++VGY TLYG Sbjct: 349 GFLQTLYPFFGNSPADTTEENLQARARGTLLMALSNKFGNLVLSTGNKSEVAVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF+ LKD+YKT VF+LA +RNS VIP ++ + PSAEL P Q DQ Sbjct: 409 DMVGGFSVLKDVYKTIVFELAKYRNSLS-------EVPVIPERVITRPPSAELSPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I+ +E + S + + + TV V L+ +EYKRRQ +G +I+ Sbjct: 462 DSLPPYDILDAILYAYIEEDMSQEDIIAKGFERATVEKVIKLVDRNEYKRRQGAIGPRIS 521 Query: 540 AKSFGRDRLYPISNKFR 556 +++FGRDR YPI N ++ Sbjct: 522 SRAFGRDRRYPIVNGWK 538 >gi|99082118|ref|YP_614272.1| NAD synthetase [Ruegeria sp. TM1040] gi|99038398|gb|ABF65010.1| NAD+ synthetase [Ruegeria sp. TM1040] Length = 553 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 243/559 (43%), Positives = 338/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I +AQLNP VGD+AGN AKA A +E DL+ E+FI+GY +DLV K Sbjct: 2 MADSFRITLAQLNPTVGDLAGNAAKALSAWQEGRAADADLVALPEMFITGYNTQDLVMKP 61 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F QA + ++ L T + G + +G P + + N+ +IL G I + K +LPN Sbjct: 62 AFHQAAIAEVEALAKATAE-GPALAIGSPWVEDGKLYNAYLILKGGKIASKCLKHHLPNE 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L++ GAEFL N SPYY Sbjct: 121 TVFDEVRIFDAGPLGGPYSVGNTRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYY 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ R + + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 180 RGKMETRINHMVARAVETGLPVIYLNMVGGQDDQVFDGGSFALNPHGALAVQMPVFDEC- 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + ++ W + A E DY VLSLRDY+ K F K ++GLS Sbjct: 239 -IAQLDLERTADGWRIKEGEKAHLP----DAWEQDYRTMVLSLRDYMGKTGFKKALLGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDALG ENV+ +MLP +YTS +SLEDA A AKALG YD +PI + Sbjct: 294 GGVDSAIVAAIAVDALGAENVRCVMLPSEYTSKESLEDAEAVAKALGVHYDYVPISEGRE 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 354 AITNTLAPLFAGRDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI P++++K PSAELR Q D Sbjct: 414 DMNGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPEGEVIRPNVIDKPPSAELREDQKDS 473 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I+ +V+ E S + ++ + + VEHLLY SEYKR Q+ G ++T Sbjct: 474 DSLPDYPELDAILDILVDQEGSIADCVAAGFDRDVAKRVEHLLYISEYKRFQSAPGARLT 533 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 534 KRAFWLDRRYPIVNRWRDP 552 >gi|298571422|gb|ADI87762.1| NAD+ synthetase [uncultured Nitrospirae bacterium MY4-5C] Length = 577 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 231/587 (39%), Positives = 326/587 (55%), Gaps = 43/587 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+K L++A+AQ+NP VG I N K E+A R D++ F EL I+GYPPEDL+ K Sbjct: 1 MVKTLRLALAQINPTVGSIKKNSEKIISFIEDARRHSADIVAFPELCITGYPPEDLLLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 SF++ A+D +K T+D +VVGF + + + N+ +L II + KI LPNY Sbjct: 61 SFLKDNIKALDEIKRHTND--IAVVVGFADKQDD-IYNAAALLYNHQIIDIYHKIFLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F SG + +G+ ICEDIW GAE + ++NASPY Sbjct: 118 GVFDELRYFQSGVLSPVYEIAGCLVGLNICEDIWYPDGPAYKQSLAGAELIININASPYG 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK K + +++ + + + Y+N VGGQDEL+FDG+S FD ++ + F+E+ Sbjct: 178 FNKSKAKDTMLSARAFDNRVILAYLNTVGGQDELVFDGSSTVFDSTGEVLARGASFTEEL 237 Query: 241 FMTEWHYD-------------------QQLSQWNYMSDDSASTMYIP-----------LQ 270 + + + D P + Sbjct: 238 IVVDLDMEGVFVSRLHDPRRRQKVKALCHNEIKRVFVCDRVPGEKSPIKLIKRMPVRQMD 297 Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 +E YNA VL RDYV KN F V+IGLSGGIDS++ A IAVDA+G ENV+ I +P Y Sbjct: 298 RDEEIYNALVLGTRDYVTKNGFKSVVIGLSGGIDSSIVACIAVDAIGPENVRGIFMPSPY 357 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 TS S ED ++ L + +PI + + + ++ + + EN+Q+RIRGNI Sbjct: 358 TSQDSREDVCELSENLKIRTTEIPIAGIFSTYLGELTAAFDGKAADTTEENLQARIRGNI 417 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMA+SN ++LTT NKSE+S GY TLYGDM+GGF +KD+ K V++L+ WRNS Sbjct: 418 LMAMSNKFGPLVLTTGNKSEMSAGYATLYGDMAGGFAVIKDVPKMMVYKLSRWRNS---- 473 Query: 451 SGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQE 509 +TEVIP +L K+P+AELR +Q D +SLPPY ILD II+ VE E Sbjct: 474 -----VTEVIPERVLTKAPTAELRHNQKDSDSLPPYEILDTIIESYVEKEMGLEEITTLG 528 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +++TVR L+ GSEYKRRQ+P G KIT ++FG+DR +PI+N +R Sbjct: 529 IDEQTVRKALALIDGSEYKRRQSPPGIKITGRAFGKDRRFPITNGYR 575 >gi|326796307|ref|YP_004314127.1| NAD+ synthetase [Marinomonas mediterranea MMB-1] gi|326547071|gb|ADZ92291.1| NAD+ synthetase [Marinomonas mediterranea MMB-1] Length = 545 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 220/555 (39%), Positives = 328/555 (59%), Gaps = 18/555 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKKSF 62 L++A+AQL+ +VGDI N +A EA D+++F EL ++GYPPEDL+ + S Sbjct: 2 TLRVAMAQLDMLVGDIKNNTESVIKAAHEARDHHQADVVVFPELTLTGYPPEDLLLRPSL 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +I T+ ++ HD +VVG+PR+ + N + G ++ K LPN+ Sbjct: 62 DSRIEDSIQTILNEVHD--IYVVVGYPRRIDGDLFNCAGVFHQGRMLGEYAKQKLPNFKV 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F +KR F G + +++++G+ ICEDIW + ++ GAE + +L+ASP++ Sbjct: 120 FDDKRYFEEGTEPLIVDVKNVKVGLSICEDIW-HPEPSLQAQEAGAELIINLSASPFHIE 178 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K+ R +++ + LPI++VN +G QDEL+++G SF + Q Q Q F + Sbjct: 179 KMGVREQLLHQRAVETQLPIVFVNYMGAQDELVYEGGSFVVNAQGQKIAQAPWFESGIYT 238 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++ ++ +Q AST+ L EE+ Y A VL LRDY++KN F +++GLSGG Sbjct: 239 VDFSVEETRTQKVI---PLASTVAPALSIEESVYQAMVLGLRDYIEKNRFKGIVLGLSGG 295 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL A+AVDA+G + VQ +M+PY YTS SLEDA A LG Y VLPI +V F Sbjct: 296 IDSALSLAVAVDAIGADRVQAVMMPYTYTSSMSLEDAEEEATLLGVNYSVLPIEPMVTAF 355 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + EN+Q+R RG LMA+SN M+LTT NKSE++VGY TLYGDM Sbjct: 356 METLAPEFEGYAKDTTEENLQARTRGVTLMAISNKKGYMVLTTGNKSEMAVGYATLYGDM 415 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 GG++ LKD++KT VF+L +RN+ L VIP ++ + PSAEL P Q D++S Sbjct: 416 VGGYSVLKDVFKTLVFKLCRYRNT---------LGYVIPERVITRPPSAELAPDQIDEDS 466 Query: 483 LPPYPILDDIIKRIVENEESFINNDQ--EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 LP Y LD+I+ +E + S + +++ ETV V L+ +EYKRRQAP G ++T Sbjct: 467 LPSYDELDEILHLYIERDMSAEAILEIGQFDRETVYRVLRLVDLNEYKRRQAPTGVRLTE 526 Query: 541 KSFGRDRLYPISNKF 555 + FGRDR YPI+N + Sbjct: 527 RGFGRDRRYPITNGW 541 >gi|254517171|ref|ZP_05129229.1| NAD+ synthetase [gamma proteobacterium NOR5-3] gi|219674676|gb|EED31044.1| NAD+ synthetase [gamma proteobacterium NOR5-3] Length = 540 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 223/554 (40%), Positives = 322/554 (58%), Gaps = 19/554 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + I +AQ+N VGD GN + A E+A + +++F EL +SGYPPEDL+ + + Sbjct: 1 MHILMAQINTTVGDFTGNTDQVIVAAEQACAQHDSPIVVFPELTLSGYPPEDLLLRPALC 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + S A++ L SD G A ++VG+P + + + N ++ G ++A K LPNY F Sbjct: 61 KRVSDALERLCSDLP-GSAWVIVGYPIRREGALYNCAGVIHQGELVAEYRKCELPNYQVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F +G + +R+G+ ICEDIW A+ L +LNASPY+ K Sbjct: 120 DEKRYFTAGSQPCVLDIEGVRVGLSICEDIWVPGPTAATAAAG-AQLLINLNASPYHRGK 178 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++R E+V+ + L ++YVNQVGGQDEL+FDG SF + + +A Q F Sbjct: 179 QQQRLELVSQRCKDNKLAVVYVNQVGGQDELVFDGGSFAMNPEGSVAVQAPRFQNATTWC 238 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 E+ + S + PL E A + A VL +RDYV KN F V++GLSGG+ Sbjct: 239 EYSGEAGAGALRTSSIEP------PLDELAAIWQALVLGMRDYVNKNGFPGVVLGLSGGV 292 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A+AVDALG E VQ +M+P++YTS S+ DAA + LG ++ V+ I + F Sbjct: 293 DSALTLAVAVDALGPERVQAVMMPFRYTSDISIADAAQQSATLGVRHSVISIEPIYESFL 352 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + EN+Q+R RG +LM+LSN ++++LTT NKSE++VGY TLYGDM+ Sbjct: 353 AALQDEFAGLEPDTTEENLQARCRGVLLMSLSNKKRSLVLTTGNKSELAVGYSTLYGDMA 412 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+ KT V+ L +RNS L IP ++E+ PSAEL P Q D++SL Sbjct: 413 GGFDVLKDVPKTLVYALCHYRNS---------LGPCIPERVIERPPSAELAPDQKDEDSL 463 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD I++ VE + S + + V L+ +EYKRRQAPVG +IT + Sbjct: 464 PPYEVLDRILELYVERDYSAEAIIAEGIDRADVERAVRLVDINEYKRRQAPVGVRITQRG 523 Query: 543 FGRDRLYPISNKFR 556 FGRDR YPI++ +R Sbjct: 524 FGRDRRYPITSAWR 537 >gi|332868347|ref|ZP_08438106.1| NAD+ synthase [Acinetobacter baumannii 6013113] gi|332733453|gb|EGJ64632.1| NAD+ synthase [Acinetobacter baumannii 6013113] Length = 541 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 226/556 (40%), Positives = 323/556 (58%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K K+A+AQ +P +G+I N K +A +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFHELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFAQLSEV---KDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICEDIW + N K L + + + LN+SPY Sbjct: 118 GVFDEKRYFQKGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSQLNVDTVLVLNSSPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ +HL I+YVNQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRKQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ E+ D +L + + + I Y V++ RDYV+++ F VI+GLS Sbjct: 237 YIAEFDRDTKLYKVVESAPALETFAEI--------YQGLVMATRDYVERSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G E VQ +M+PY YTS S+EDAA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE+SVGY TLYG Sbjct: 349 SFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNSLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E + + + ++ E V V L+ +EYKRRQ +G +IT Sbjct: 462 DSLPAYDVLDAILYAYIEEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRIT 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIVNGW 537 >gi|222111153|ref|YP_002553417.1| NAD(+) synthetase [Acidovorax ebreus TPSY] gi|221730597|gb|ACM33417.1| NAD+ synthetase [Acidovorax ebreus TPSY] Length = 554 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 231/560 (41%), Positives = 327/560 (58%), Gaps = 21/560 (3%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQLN VVGD+ GN K A +A+ G L+L EL + GY EDL + +F+QAC Sbjct: 5 ISIAQLNFVVGDVPGNAQKILAAARDAHAAGARLLLTPELALCGYAAEDLYLRPAFVQAC 64 Query: 67 SSAIDTLKSDTHDG-GAGIVVGFPRQDQEGV--------LNSVVILDAGNIIAVRDKINL 117 A++ L + T D G +VVG PR+ GV N+ +L AG I K L Sbjct: 65 EQALEGLAAATADWPGLTVVVGHPRRVAHGVGEGGRGLCHNAASVLRAGRIEHTYAKQYL 124 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F E+R F+ G N +R+G+LICED W + ++ GA+ L +LNAS Sbjct: 125 PNYEVFDERRYFVPGDENCVFEVDGVRMGLLICEDAW-YPGPARSAREAGAQVLVTLNAS 183 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY+ K +R +++ ++ LP++Y + VGGQDE++F+G SF + +A + F Sbjct: 184 PYHLGKAVEREQVMRERVLETGLPLVYAHLVGGQDEVVFEGRSFALNADGSVAARAPGFE 243 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E+ + + Q + + + E ++A VL +RDYV KN F V++ Sbjct: 244 EKTLLIKV-------QQAQAAIVLEAPVAPHEGWEAELWSALVLGVRDYVGKNGFPGVLL 296 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DSAL AIAVDALG + V+T+M+P YT+ S DA A LG +YD + I Sbjct: 297 GLSGGMDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAGRLGVRYDEIAIAP 356 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F + ++ P EN+Q+RIRG +LMALSN +++LTT NKSE++ GY T Sbjct: 357 QFEAFKTALAPQFASLPEDTTEENLQARIRGMLLMALSNKFGSLVLTTGNKSELATGYCT 416 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF +KD+ KT+VF LA WRN++ G IP I+ + PSAELRP Q Sbjct: 417 LYGDMAGGFAVIKDVVKTRVFALARWRNANDP---YGTGANPIPERIITRPPSAELRPDQ 473 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+SLPPY +LD I++R +EN+E + + V V L+ +EYKRRQAPVG Sbjct: 474 KDQDSLPPYEVLDAIVERYMENDEPLEDIVRAGFERADVERVTRLIKLNEYKRRQAPVGV 533 Query: 537 KITAKSFGRDRLYPISNKFR 556 ++T +SFG+D YPI+N+FR Sbjct: 534 RVTRRSFGKDWRYPITNRFR 553 >gi|304415435|ref|ZP_07396084.1| putative NAD synthase [Candidatus Regiella insecticola LSR1] gi|304282699|gb|EFL91213.1| putative NAD synthase [Candidatus Regiella insecticola LSR1] Length = 546 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 232/557 (41%), Positives = 338/557 (60%), Gaps = 20/557 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + L IA+AQLN +VGDI GN + RA ++ + DL++F+EL + GYPPEDL+F+ Sbjct: 2 MNRSLSIALAQLNLLVGDIKGNTDRILRALKQQRGR-ADLVMFSELALCGYPPEDLLFRA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + + L+ + I+VG P + + + N++ G ++ K LPN+ Sbjct: 61 DFNQLCITQLARLQKASVH--TAILVGHPWKQGDQLYNALSFFSEGKLLGRYFKQLLPNH 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F G ++ + F+ RLG+LICEDIW + + LK GAE L S+NASPY+ Sbjct: 119 SVFDEKRYFTPGNTSCIVEFKGYRLGMLICEDIW-SPDPVDALKNLGAEVLLSINASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R++++ LP++Y+NQVG QDELIFDG S F+ Q L ++ FSE++ Sbjct: 178 REKPYIRNQLLINHCKGTTLPLVYLNQVGVQDELIFDGCSKVFNAQGDLIHRLAAFSEES 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + S A T Y+A V+++RDYV KN F I+GLS Sbjct: 238 LVFNL--------KELASQQIAETAIDADHPLAQIYDALVMAVRDYVNKNGFKTAILGLS 289 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDAL +NVQ +M+P++YTS +S+ A A+ + + IH + + Sbjct: 290 GGIDSALTLAIAVDALTAKNVQALMMPFRYTSEESINYARQQAQKQKIELKEIDIHPIFD 349 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ F + EN+Q+R RG +LMA++N ++LTT NKSE++VGY TLYG Sbjct: 350 AVMGQLAPFFADRKKDTTEENLQARCRGMLLMAMANKFGHIVLTTGNKSELAVGYSTLYG 409 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ EVIP +++++ PSAEL P+QTDQ Sbjct: 410 DMAGGFDVLKDVSKTLVFKLAKYRNARDG-------VEVIPQAVIDRPPSAELAPNQTDQ 462 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 + LPPY +LD I++ +E +ES + Q ++ TVR V HL+ +E+KRRQA +G +IT Sbjct: 463 DQLPPYAVLDKILEGYLEKDESVTDLVAQGCDEATVRKVIHLVDSNEHKRRQAAIGPRIT 522 Query: 540 AKSFGRDRLYPISNKFR 556 + FG+DR YPI+N FR Sbjct: 523 CRDFGKDRRYPITNGFR 539 >gi|121594129|ref|YP_986025.1| NAD+ synthetase [Acidovorax sp. JS42] gi|120606209|gb|ABM41949.1| NAD+ synthetase [Acidovorax sp. JS42] Length = 554 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 230/560 (41%), Positives = 326/560 (58%), Gaps = 21/560 (3%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQ N VVGD+ GN K A +A+ G L+L EL + GY EDL + +F+QAC Sbjct: 5 ISIAQRNFVVGDVPGNAQKILAAARDAHAAGARLLLTPELALCGYAAEDLYLRPAFVQAC 64 Query: 67 SSAIDTLKSDTHDG-GAGIVVGFPRQDQEGV--------LNSVVILDAGNIIAVRDKINL 117 A++ L + T D G +VVG PR+ GV N+ +L AG I K L Sbjct: 65 EQALEGLAAATADWPGLTVVVGHPRRVAHGVGEGGRGLCHNAASVLRAGRIEHTYAKQYL 124 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F E+R F+ G N +R+G+LICED W + ++ GA+ L +LNAS Sbjct: 125 PNYEVFDERRYFVPGDENCVFEVEGVRMGLLICEDAW-YPGPARSAREAGAQVLVTLNAS 183 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY+ K +R +++ ++ LP++Y + VGGQDE++F+G SF + +A + F Sbjct: 184 PYHLGKAVEREQVMRERVQETGLPLVYAHLVGGQDEVVFEGRSFALNADGNVAARAPGFE 243 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E+ + + Q + + + E ++A VL +RDYV KN F V++ Sbjct: 244 EKTLLIKV-------QQAQAAIVLEAPVAPHEGWEAELWSALVLGVRDYVGKNGFPGVLL 296 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DSAL AIAVDALG + V+T+M+P YT+ S DA A LG +YD + I Sbjct: 297 GLSGGMDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAARLGVRYDEIAIAP 356 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F + ++ P EN+Q+RIRG +LMALSN +++LTT NKSE++ GY T Sbjct: 357 QFEAFKTALAPQFAGLPEDTTEENLQARIRGMLLMALSNKFGSLVLTTGNKSELATGYCT 416 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF +KD+ KT+VF LA WRN++ G IP I+ + PSAELRP Q Sbjct: 417 LYGDMAGGFAVIKDVVKTRVFALARWRNANDP---YGTGANPIPERIITRPPSAELRPDQ 473 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+SLPPY +LD I++R +EN+E + + V V L+ +EYKRRQAPVG Sbjct: 474 KDQDSLPPYEVLDAIVERYMENDEPLEDIVRAGFERADVERVTRLIKLNEYKRRQAPVGV 533 Query: 537 KITAKSFGRDRLYPISNKFR 556 ++T +SFG+D YPI+N+FR Sbjct: 534 RVTRRSFGKDWRYPITNRFR 553 >gi|239617986|ref|YP_002941308.1| NAD+ synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506817|gb|ACR80304.1| NAD+ synthetase [Kosmotoga olearia TBF 19.5.1] Length = 578 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 229/574 (39%), Positives = 334/574 (58%), Gaps = 32/574 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ+N VGD+ GN+ K + A ++G+ +++F EL I+GYPPEDLV + FI+ Sbjct: 3 VRLGLAQINTTVGDLKGNVTKINEYIDLAEKKGVSILVFPELAITGYPPEDLVLRTGFIK 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 SA++ ++ T D +++GF D E + N+ +L G +AV K++LPNYS F Sbjct: 63 DNLSALEKVREYTIDKELLVILGFVDFDFE-IYNAAAVLHNGEKVAVYRKMHLPNYSVFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F +G + +++R+G+ ICED+W S GA + +L+ASP+ K Sbjct: 122 EKRYFSAGKKALILRNKNLRIGVNICEDLWVPSGPINEQTIFGANLIINLSASPFTAGKS 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +KR E+++ + S I Y N VGGQDEL+FDG S + +F + F E+ F+T+ Sbjct: 182 RKRLELLSTRASEYSCAIAYCNLVGGQDELVFDGLSAVVLPDGR-SFIARGFEEELFITD 240 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEA----------------------DYNACVLS 282 D Y + L+E+E +NA VL Sbjct: 241 LDLDIATRYNLYEGKRKSFKANAELEEKEISFTLRDNIEFLTSHRIAEGIEEIFNALVLG 300 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LRDYV+KN F V +GLSGG+DS+L A IAV+ALG+ENV +++P +YTS S+EDA Sbjct: 301 LRDYVKKNGFSTVTLGLSGGMDSSLAACIAVEALGRENVVGVLMPSEYTSNTSIEDAKML 360 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK LG K +PI + + + +S + + ENIQ+RIRGNILMALSN ++ Sbjct: 361 AKNLGIKTLTVPITAIYHSYLGTLSDAFKGREQDVTEENIQARIRGNILMALSNKFGWLV 420 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T NKSE++ GY TLYGDM+GGF LKD+YKT V++LA + N TE+IP Sbjct: 421 LATGNKSELATGYATLYGDMAGGFAVLKDVYKTDVYRLADYFNRT-------KKTEIIPR 473 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHL 521 + EK PSAELRP+QTDQ++LPPY LD I+K +E S + +++ TV + L Sbjct: 474 RVFEKPPSAELRPNQTDQDTLPPYETLDKILKLFIEEGLSANEILEHGFDNNTVNFTLKL 533 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L +EYKRRQ G KI+ ++FG+D PI+N + Sbjct: 534 LKKNEYKRRQGAPGIKISRRAFGKDWRMPITNDY 567 >gi|307543917|ref|YP_003896396.1| NAD+ synthetase [Halomonas elongata DSM 2581] gi|307215941|emb|CBV41211.1| NAD+ synthetase [Halomonas elongata DSM 2581] Length = 557 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 229/557 (41%), Positives = 322/557 (57%), Gaps = 18/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKK 60 ++ L + +AQL+P+VGDI GN +A EA G D+++ ELF++GYPPEDL+ + Sbjct: 14 MQDLTLVMAQLDPLVGDIPGNTERAIETVREARIEHGADVVVLPELFLTGYPPEDLLLRP 73 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A + ++VG+P + + N +L G + K LPNY Sbjct: 74 SMETRLRQARARMAEKMA-RDVMVIVGYPGRREGANWNLAGVLYNGEWLGEYAKQALPNY 132 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F G S I + +LG+LICED+W+ + ++ GA+ L +LNASP++ Sbjct: 133 EVFDEQRYFAVGESPLVIEHKGAKLGVLICEDVWE-EGPVQQAREAGADILVTLNASPFH 191 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K +R ++ + V LPI+YVNQ+GGQDEL+FDG S C D +L Q H++ Sbjct: 192 QDKPAERLALLEQRAREVGLPIVYVNQIGGQDELVFDGGSACVDADGELRVQAPHWAVGL 251 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ D+Q + SA + EE Y A V LRDYV K+ F V++GLS Sbjct: 252 MPVQFVRDEQGAWVP-----SAGEVDEEASAEENLYCALVTGLRDYVNKSGFKGVVLGLS 306 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG + V +M+PY YT+ S EDAA A+ LG Y+VLPI +V Sbjct: 307 GGIDSALSLAIAVDALGPQRVHAVMMPYHYTADISKEDAAEQARMLGVDYEVLPIESMVE 366 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ EN+QSR RG +LMA+SN M+L+T NKSE++VGY TLYG Sbjct: 367 AFMDTLADSFAGTERDTTEENLQSRCRGVLLMAISNKKGLMVLSTGNKSEMAVGYATLYG 426 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+N +KD+YKT V++LA WRN+ IP ++E+ PSAEL P Q D Sbjct: 427 DMVGGYNAIKDVYKTWVYRLARWRNTQDPA---------IPERVIERPPSAELAPDQQDT 477 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y LD I+ R +E + S + ++ + V V L+ EYKRRQAPVG ++T Sbjct: 478 DSLPDYDTLDAILVRYIEGDMSAEAIIEAGFDHDDVYKVVRLVDRCEYKRRQAPVGVRVT 537 Query: 540 AKSFGRDRLYPISNKFR 556 + FGRDR YPI N ++ Sbjct: 538 RRGFGRDRRYPIVNGWQ 554 >gi|50085923|ref|YP_047433.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter sp. ADP1] gi|49531899|emb|CAG69611.1| putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Acinetobacter sp. ADP1] Length = 541 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 230/557 (41%), Positives = 329/557 (59%), Gaps = 21/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G+I N + EA +Q DLI+F EL + GYP EDL+ + + Sbjct: 1 MKSFKIALAQFSPHIGNIDSNAQRMVEQANEAKKQNADLIIFPELSVIGYPAEDLLLRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A LK +V GF Q +EG NS ++ G ++ V +K NLPNY Sbjct: 61 LNKRMQKAFQQLKEV---KDIVMVFGFVHQTEEGHRYNSAAVMKDGVVLGVYNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F G+ + + + G+LICEDIW + N K L K E + LNASPY Sbjct: 118 SVFDEKRYFSPGHQHLVFEYLGHKFGVLICEDIW-SINTVKQLSKLNVETVLVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + +T +++ ++Y+NQVGGQD+LIFDG+SF + ++AFQ F E+ Sbjct: 177 VGKPQHRVQTLTELSKQLNVHLVYLNQVGGQDDLIFDGSSFIINHDGEVAFQAPSFKEEL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +E+ + Q Y D A + Y + V++ RDYVQ++ F VI+GLS Sbjct: 237 YYSEFDIE----QKRYKKIDPAPALDT----IAEIYQSLVMATRDYVQRSGFSGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G + VQ +M+PY YTS S+EDA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAADAIGADKVQAVMMPYTYTSQISVEDATEQARRMGVTFGIAEIHPIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE++VGY TLYG Sbjct: 349 SFMQTLYPFFGNAPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELAVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RN+ T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNTLS-------ETPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y ILD I+ +E ++S + + ++ E V V L+ +EYKRRQ +G +I+ Sbjct: 462 DSLPAYDILDAILYAYIEEDQSQSDIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRIS 521 Query: 540 AKSFGRDRLYPISNKFR 556 +++F R+R YPI N +R Sbjct: 522 SRAFSRERRYPIVNGWR 538 >gi|206602425|gb|EDZ38906.1| NAD+ synthase [Leptospirillum sp. Group II '5-way CG'] Length = 592 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 230/602 (38%), Positives = 331/602 (54%), Gaps = 57/602 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++KLK+A+AQ NP+VGDI+GN+A + +A + +D+++F EL ++GYPPEDL+ K S Sbjct: 1 MRKLKLALAQTNPIVGDISGNLAHIKDMIVQARSEHVDVVVFPELALTGYPPEDLLLKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI A+D L + ++VGF + + + N+ +L G + + K LPNY Sbjct: 61 FIDKNLRALDELLGFAPEL--LVLVGFVDRQDD-IYNAAAVLHGGKLHGIYRKQYLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F G + + +R RLGI ICEDIW G AE + +L+ASP++ Sbjct: 118 VFDENRYFQEGVESPVLEYRSARLGINICEDIWYPKGPLYTQTLMGDAECILNLSASPFH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R ++ + I YVN VGGQDEL+FDG S ++ + K F E Sbjct: 178 AGKREVRENMLCTRAVDSACYIAYVNMVGGQDELVFDGQSLVISPDGEIESRGKAFQEDL 237 Query: 241 FMTEWHYDQQLS------------------QWNYMSDDSASTMYI--------------- 267 +TE D + + DD I Sbjct: 238 LITEIDLDHVFRVRLHDPRRRKDRLSQSLDRPQWNQDDVLVRWKIEEPGRRQASGGTLPE 297 Query: 268 -----------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 PL Y A V +RDYV+KN+F +V++GLSGGIDSAL AAIA DAL Sbjct: 298 KKVLVKSPYTQPLDRLAEIYEALVTGVRDYVRKNSFREVLVGLSGGIDSALVAAIATDAL 357 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 G E+V + +P +TS +S ED + L + + +PI F ++S Q+ P Sbjct: 358 GPEHVHGLFMPSMFTSQESYEDVLKLSGTLKVQVETIPIAAAFEQFLQILSPHFQDRPRD 417 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 EN+QSRIRG +LMALSN ++LTT NKSE+SVGY TLYGDM+GGF+ LKD+ KT Sbjct: 418 TAEENLQSRIRGLLLMALSNKFHWLVLTTGNKSEMSVGYQTLYGDMAGGFSVLKDVPKTL 477 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 V+ LA + N+ ++IP I+EK+P+AELRP+Q D +SLPPY ILD I++ Sbjct: 478 VYDLADFLNTRR--------ADIIPHRIIEKAPTAELRPNQKDLDSLPPYEILDPIMEAY 529 Query: 497 VENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 VE+++ F + ++ TV V L+ SEYKRRQ+P G K+T ++FG+D PI+N+F Sbjct: 530 VEDDQGFEEIIGKGFDPATVARVLSLIDKSEYKRRQSPPGIKLTLRAFGKDWRVPITNRF 589 Query: 556 RD 557 ++ Sbjct: 590 KE 591 >gi|84499552|ref|ZP_00997840.1| NAD(+) synthase [Oceanicola batsensis HTCC2597] gi|84392696|gb|EAQ04907.1| NAD(+) synthase [Oceanicola batsensis HTCC2597] Length = 552 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 247/559 (44%), Positives = 334/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + QLNP VGDIAGN A AR+A E G DL+ E+F++GY +DLV K Sbjct: 1 MTDRFRITLCQLNPTVGDIAGNAALARQAWETGKAAGADLVALPEMFVTGYQTQDLVGKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA +AI+TL +D D G + +G P + + N IL G +I+ K NLPN Sbjct: 61 VFHQAALAAIETLAADCAD-GPALAIGGPALEGASLFNGYHILSGGRVISRILKHNLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + S P +R+G ICED W +S + + L + GAE L N SPYY Sbjct: 120 TVFDEVRLYGSAAPAGPYSIGGVRIGSPICEDAW-HSEVPETLAETGAEILLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ R+ + ++ LP+IY+N GGQD+ +FDG SF + ++AF M F +Q Sbjct: 179 RGKMETRYNHMVARVVETGLPLIYLNMTGGQDDQVFDGGSFGLNPGGRMAFHMPVFDQQ- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T + W + A+ E E DY V +LRDY +K F KV++GLS Sbjct: 238 -ITHVDLTRTPEGWRIDEGEKAAMP----DEWEQDYRCMVEALRDYCRKTGFGKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DALG ENV+ +MLP +YTS SLEDA A A+ALGC+Y LPI Sbjct: 293 GGIDSAIVATIAADALGPENVRCVMLPSEYTSDHSLEDARAVARALGCRYHDLPISQGRQ 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AITETLAPLFEGTDPDVTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVIP I+ K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFEQCRWRNANHRDWMMGPPGEVIPDRIITKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I+ +V+ + S + Y E + VE L+Y SEYKR Q+ GT++T Sbjct: 473 DSLPDYPVLDAILNILVDLDGSVADCVAAGYRREDAKQVERLIYLSEYKRFQSAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 +F DR YPI N++RD Sbjct: 533 KHAFWLDRRYPIVNRWRDP 551 >gi|171463824|ref|YP_001797937.1| NAD+ synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193362|gb|ACB44323.1| NAD+ synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 539 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 222/557 (39%), Positives = 325/557 (58%), Gaps = 21/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KIA+AQ+NP++GD+AGN +A +A QG L++ EL ++GYPPEDL+ + + Sbjct: 1 MSAQKIALAQINPLLGDLAGNAQLIYKAALDAYSQGAKLVVTPELSLTGYPPEDLLLRPA 60 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 FI+A ++ L + ++VG P++ G+ N +L +G +IA K LPN+ Sbjct: 61 FIEAAQQQLELLMKELAQHSDLTVIVGHPKKTSVGLQNYASVLQSGKVIAGYAKQELPNH 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F+ G IR G+++CED W ++ K GA+ L NASPY+ Sbjct: 121 EVFDEVRYFVPGNQACVFECDGIRYGMILCEDAW-HAGPAKQAHAAGAQVLLVPNASPYH 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R +++ I+ +P++YVN VGGQDEL+FDG SF + + M F Sbjct: 180 LKKEALRIDVLREHIAQTKMPLVYVNTVGGQDELVFDGGSFALNSHGDVVMAMPQFETGL 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +L + + P E Y A VL +RDYV KN+F VIIGLS Sbjct: 240 GVVSASSSGELEK---------GWITPPQSVEAQAYQALVLGVRDYVTKNHFPGVIIGLS 290 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AIAVDALG + V+ +M+ YT+ S DA A+ L +YD +PI V+ Sbjct: 291 GGVDSALVLAIAVDALGADKVRAVMMASHYTADISWIDAREMAENLSMQYDEIPISGPVD 350 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + +++ ENIQ+R+RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 351 ALEASLAKQFTGLNVDATEENIQARVRGTLLMALSNKTGRLVLTTGNKSEMAVGYCTLYG 410 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF +KD+ KT V++L ++RNS + +IP IL ++PSAELRP Q DQ Sbjct: 411 DMAGGFAVIKDIAKTLVYRLCAYRNS---------IAPIIPERILTRAPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I++R +E +S ++ E+V V L+ +EYKRRQAP G ++T Sbjct: 462 DSLPSYEVLDGIVERYMEQNQSIAQIIAAGFDPESVEKVTRLIKLNEYKRRQAPPGVRVT 521 Query: 540 AKSFGRDRLYPISNKFR 556 A++FGRD YPI+++FR Sbjct: 522 ARAFGRDWRYPITSQFR 538 >gi|262373253|ref|ZP_06066532.1| NAD synthase [Acinetobacter junii SH205] gi|262313278|gb|EEY94363.1| NAD synthase [Acinetobacter junii SH205] Length = 541 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 225/556 (40%), Positives = 322/556 (57%), Gaps = 21/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G+I N K A +Q DLI+F EL GYP EDL+ + + Sbjct: 1 MKNFKIALAQFSPHIGNIDANTQKMVEQANLAKQQQADLIIFPELSTIGYPAEDLLIRPN 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + A L +V GF Q ++G NS ++ G ++ + +K NLPNY Sbjct: 61 LSKRTQKAFAQLSEV---KDIVMVFGFVHQTEDGYRYNSAAVMKDGQVLGIYNKHNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICED+W + N K L + E LNASPY Sbjct: 118 GVFDEKRYFQEGHQHLIFEYLGHKFGVLICEDVW-SLNTVKQLSQLNVETALVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + + ++L ++YVNQVGGQD+LIFDG+SF + ++A Q F E Sbjct: 177 VGKPQHRIQTLNELAKQLNLNLVYVNQVGGQDDLIFDGSSFVTNKNGEIALQAPSFQESI 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E+ +Q+ + + + I Y A V++ RDYVQ++ F VI+GLS Sbjct: 237 YFVEYDAEQKEFKKTESAPALETFAEI--------YQALVMATRDYVQRSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDA+G + VQ +M+PY YTS S+EDA A+ +G + + IH +VN Sbjct: 289 GGIDSALTLAIAVDAIGADKVQAVMMPYTYTSQMSVEDATEQARRMGVTFGIAEIHPIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L+T NKSEISVGY TLYG Sbjct: 349 SFMQTLYPFFGNTPADATEENLQARTRGTLLMGLSNKFGNLVLSTGNKSEISVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF+ LKD+YKT VF+LA +RN+ T VIP ++ + PSAELRP QTDQ Sbjct: 409 DMVGGFSVLKDVYKTIVFELAKYRNTLS-------ETPVIPERVISRPPSAELRPDQTDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ +E ++S + + + E V V L+ +EYKRRQ +G +I+ Sbjct: 462 DSLPAYDVLDAILYAYIEEDQSQADIIARGFEAEVVEKVIRLVDRNEYKRRQGAIGPRIS 521 Query: 540 AKSFGRDRLYPISNKF 555 +++F R+R YPI N + Sbjct: 522 SRAFSRERRYPIVNGW 537 >gi|121608702|ref|YP_996509.1| NAD+ synthetase [Verminephrobacter eiseniae EF01-2] gi|121553342|gb|ABM57491.1| NAD+ synthetase [Verminephrobacter eiseniae EF01-2] Length = 552 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 228/561 (40%), Positives = 321/561 (57%), Gaps = 19/561 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L I AQLN VVGD+ N K A +A+ +G L+L EL I GY EDL + +FI Sbjct: 2 TLSICTAQLNFVVGDMPANAQKIIAAARQAHARGARLLLTPELAICGYAAEDLFLRPAFI 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPR------QDQEGVLNSVVILDAGNIIAVRDKIN 116 AC A+ T+ +T D IV+G PR +N+ +L AG I K Sbjct: 62 AACDDAVKTVARETADLKDLAIVLGHPRGFAPEAAAFSACINAASVLRAGQIEQTYAKRE 121 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E+R F++G+ +R+G+LICED W + + GA+ L +NA Sbjct: 122 LPNYQVFDERRYFVAGHKPCVFDMGGLRVGLLICEDAW-FAAPARDCALAGAQLLAVINA 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SP++ K +R +I+ ++ LP++Y + VGGQDE++F+G SF D +A + F Sbjct: 181 SPFHLGKGAEREQIMRERVLETGLPLVYAHLVGGQDEVVFEGRSFALDADGSVAGRAPGF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E+ H + + + + E ++A VL +RDYV KN F + Sbjct: 241 EEKLVYAHIH-------PSSSAIRIEADIAPERSLEADLWDALVLGVRDYVGKNGFAGAL 293 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AIAVDALG + ++T+M+P YT+ SL DA A+ LG ++D + I Sbjct: 294 LGLSGGIDSALVLAIAVDALGADKLRTVMMPSPYTADISLIDARELARRLGVRHDEISIT 353 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 F + ++ P EN+Q+RIRG +LMALSN A++LTT NKSE+S GY Sbjct: 354 PQWEAFKAALAPAFAGLPEDTTEENLQARIRGTLLMALSNKFGALVLTTGNKSEMSTGYC 413 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF +KD+ KT+VF LA WRN++ G IP I+ + PSAELRP Sbjct: 414 TLYGDMAGGFAVIKDVAKTRVFDLARWRNANDP---YGSGANPIPQRIIARPPSAELRPD 470 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLPPY +LD I+ R +EN+E + + V V L+ +EYKRRQAPVG Sbjct: 471 QTDQDSLPPYEVLDAIMSRYMENDEPIESIIASGFARADVERVTRLIKFNEYKRRQAPVG 530 Query: 536 TKITAKSFGRDRLYPISNKFR 556 ++T +SFG+D YPI+++FR Sbjct: 531 IRVTRRSFGKDWRYPITSRFR 551 >gi|326570757|gb|EGE20782.1| NAD+ synthetase [Moraxella catarrhalis BC1] gi|326573020|gb|EGE22996.1| NAD+ synthetase [Moraxella catarrhalis CO72] gi|326573542|gb|EGE23505.1| NAD+ synthetase [Moraxella catarrhalis 101P30B1] Length = 563 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 226/554 (40%), Positives = 318/554 (57%), Gaps = 19/554 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEI---EGIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIW-HDEPIQALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + + + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 RFDTQNK-------TFDTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILSMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKFR 556 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGWS 560 >gi|149201961|ref|ZP_01878935.1| NAD synthetase [Roseovarius sp. TM1035] gi|149145009|gb|EDM33038.1| NAD synthetase [Roseovarius sp. TM1035] Length = 555 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 243/558 (43%), Positives = 342/558 (61%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN AR A ++ G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRLTLAQLNPTVGDLAGNARLARDAWDKGRAAGADLVALPEMFITGYNTQDLVQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F QA +AI+ L D D G + +G P D + N+ IL G++ A K +LPN Sbjct: 61 AFHQAAIAAIEALARDCAD-GPALAIGGPALDGVSLHNAYYILQGGSVRARVLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + SG P +R+G ICED W + ++ + L + GAE L N SP+Y Sbjct: 120 TVFDEVRLYDSGPVAGPYTVAGVRIGSPICEDAW-HEDVAETLAETGAEILLVPNGSPHY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K+ R ++ ++ LP+IY+N VGGQD+ +FDG SF + LA Q+ F E Sbjct: 179 RDKMDLRQNMMVARVIETGLPLIYLNMVGGQDDQMFDGGSFVLNPGGALAVQLPMFQEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ W + D A + E DY A VLSLRDY++K+ F KV++GLS Sbjct: 238 -VAHVDLERGPEGWRALPGDLAHLP----DDMEQDYTAMVLSLRDYLRKSGFSKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ A IAVDA+G ENV+ +MLP +YTS +SLEDA A A+ LGC+YD +PI Sbjct: 293 GGVDSAIVATIAVDAVGAENVRCVMLPSEYTSAESLEDAKAVAENLGCRYDFVPIDAGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + EN+QSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AITATLAPLFDGRAPDLTEENLQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF++ WRN+ LGP VIP ++ K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFEICRWRNAQYRGWMLGPKGAVIPEQVISKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I++ +V+ + S + Y+ + VEHLLY SEYKR QA GT+++ Sbjct: 473 DSLPDYPVLDGILEILVDQDGSISDCVAAGYDLADAKRVEHLLYISEYKRFQAAPGTRLS 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N++RD Sbjct: 533 KRAFWLDRRYPIVNRWRD 550 >gi|297537993|ref|YP_003673762.1| NAD+ synthetase [Methylotenera sp. 301] gi|297257340|gb|ADI29185.1| NAD+ synthetase [Methylotenera sp. 301] Length = 537 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 238/552 (43%), Positives = 329/552 (59%), Gaps = 23/552 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+N +VGDIAGN+AK A + G L++ EL + GYPPEDL+ ++ F+Q Sbjct: 1 MKIAIAQMNCLVGDIAGNVAKIMANAALAKQHGATLMVTPELSLCGYPPEDLLLREDFLQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A++ L + D ++VG PRQ + N+ +L G + A K LPNYS F Sbjct: 61 ACDAALEKLSTALTD--ITVIVGHPRQVGDECFNAASVLKDGEVFATYHKHALPNYSVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F +G +++G+LIC D+W+ N K GAE L +LNASP++ K Sbjct: 119 EKRYFTAGGEPLVFEHCGVQIGVLICADVWEP-NPATLAKAAGAEVLIALNASPFHMEKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R EI+ + S L IIY N VGGQDEL+FDGASF + L Q+ F + E Sbjct: 178 STRLEILRERASETDLAIIYTNMVGGQDELVFDGASFVLNSNGDLTQQLPAFDAALEIVE 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + +A T + ++ Y A L L+DYV+KN F V++GLSGG+D Sbjct: 238 F--------MGLQPIPAAVTPQLSIEASV--YTALKLGLQDYVRKNGFPGVVLGLSGGVD 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG E VQ +M+P ++T+ S+ DAA AK LG KY +PI +L F Sbjct: 288 SALTMAIAVDALGAEKVQAVMMPSEFTADISVNDAAEMAKLLGVKYSQMPIANLYESFRV 347 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + P EN+Q+RIRG +LMA+SN ++++TT NKSE +VGY TLYGDM+G Sbjct: 348 ALADEFKGLPFDTTEENLQARIRGMLLMAISNKFGSIVVTTGNKSETAVGYCTLYGDMAG 407 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V++L +RNS L+ IP I+ + PSAELR +Q DQ+SLP Sbjct: 408 GFALLKDVPKTLVYRLCDYRNS---------LSRAIPQRIITRPPSAELRANQLDQDSLP 458 Query: 485 PYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD II+ VE+ S + Y+ V V L+ +EYKRRQ+PVG +IT + F Sbjct: 459 PYDVLDVIIEAYVEDNLSARDIIAMGYSSTDVNRVITLIDRNEYKRRQSPVGVRITHRGF 518 Query: 544 GRDRLYPISNKF 555 G+DR +PI+ K Sbjct: 519 GKDRRHPITVKL 530 >gi|261345356|ref|ZP_05973000.1| NAD(+) synthase [Providencia rustigianii DSM 4541] gi|282566399|gb|EFB71934.1| NAD(+) synthase [Providencia rustigianii DSM 4541] Length = 540 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 229/556 (41%), Positives = 339/556 (60%), Gaps = 23/556 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL I++AQLN +VGDI GN + + E+ Q D+++F+EL ++GY PEDL+F+ Sbjct: 1 MSRKLNISLAQLNWLVGDIEGNCDRMLQVVEQ-QSQNTDIVMFSELALTGYSPEDLLFRH 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F + C + + L+ + G I+VG P + + N++ G ++A K LPNY Sbjct: 60 DFEERCVAQLKRLQQAS--GECAIIVGHPWYEDSEIYNALSFFYQGKLLARYFKQELPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F + + F+ RLG+LICEDIW + ++K GAE + ++NASPY Sbjct: 118 GVFDEPRYFTAAEDTCVVDFKGYRLGLLICEDIWYD-EPIDNVKGAGAELVLTINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R +++ LPIIY+NQVGGQDEL+FDGAS + + +QM F EQ Sbjct: 177 LHKEHIRSDLLEEHCQRTGLPIIYLNQVGGQDELVFDGASKVLANKGKQVYQMAEFDEQV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + +++ + + S + Y A VL+ RDY+ KN F+ I+GLS Sbjct: 237 ATVTFEELKLVTEQPKLPEVSTT---------AQVYQALVLATRDYINKNGFNGAILGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDA+GKE VQ +M+P++YTS S+ DA A+ LG ++D++ I + + Sbjct: 288 GGIDSGLTVAIAVDAIGKEQVQAVMMPFRYTSEMSIHDAKEQAELLGVEFDIVSIEPMFD 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 348 AFMTELQPMFAGAQADTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 408 DMAGGFDVLKDVPKTLVFELAKYRNT---------ISPAIPQRVIDRPPSAELAPGQLDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ VE + S + + ++ ETVR V L+ +EYKRRQAPVG +IT Sbjct: 459 DSLPPYDVLDAILEGYVEKDLSVTDLIKLGFDKETVRKVVRLVDINEYKRRQAPVGPRIT 518 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 519 MRNFGKDRRYPITSGF 534 >gi|192362224|ref|YP_001983661.1| glutamine-dependent NAD+ synthetase signal peptide protein [Cellvibrio japonicus Ueda107] gi|190688389|gb|ACE86067.1| glutamine-dependent NAD+ synthetase signal peptide protein [Cellvibrio japonicus Ueda107] Length = 560 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 217/557 (38%), Positives = 320/557 (57%), Gaps = 22/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKK 60 + +L++ +AQ+N +VGDI GN AK + E +G +D I++ EL ++GYPPEDL+ + Sbjct: 21 MSQLQLVLAQINTLVGDIPGNTAKVLASAREVLERGPVDAIIYPELTLTGYPPEDLLLRP 80 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A+D L +VVG+PR+ + + N ++ AG ++A K LPNY Sbjct: 81 SLDGRIQRALDELLD--ARLPTTLVVGYPRRRGDKLYNMAGVIQAGKLVAEYAKQCLPNY 138 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F++G + +CEDIW + + GA + +LNASPY+ Sbjct: 139 QVFDEKRYFVAGDQPCLFDLCGQPTALTVCEDIW-HPEPMAQARAAGARLMLNLNASPYH 197 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K ++R ++ + +P++YVN VGGQDEL+FDG S D Q +++ +SE N Sbjct: 198 QGKQQEREAMIAERAREGKMPVVYVNLVGGQDELVFDGGSVVVDAQGTTRYRVPAYSEGN 257 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + + Y VL L DYV KN F+ V++GLS Sbjct: 258 YRLQLDLATGHCDPSLLVPVPERLSAV--------YQTLVLGLCDYVTKNRFNGVVLGLS 309 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG + V+ +M+P++YTS S DAA A LG +Y + I + Sbjct: 310 GGIDSALTLAIAVDALGADKVEAVMMPFRYTSDLSKNDAADEAARLGVRYGSISIEPMYE 369 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ EN+Q+R RG +LMA+SN ++LTT NKSE++VGY TLYG Sbjct: 370 AFMAALADEFAGTRRDTTEENLQARCRGVVLMAISNKKGYLVLTTGNKSEMAVGYSTLYG 429 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ L EVIP +++ + PSAEL P Q D+ Sbjct: 430 DMAGGFDVLKDVPKTLVFELARYRNT---------LGEVIPETVITRPPSAELAPDQKDE 480 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I+ VE ++S + + E V V L+ +EYKRRQAP+G +I+ Sbjct: 481 DSLPPYEILDQILALYVEQDQSAEAIIARGFTREQVERVVRLVDINEYKRRQAPIGVRIS 540 Query: 540 AKSFGRDRLYPISNKFR 556 + FGRDR YPI++ ++ Sbjct: 541 QRGFGRDRRYPITSGWQ 557 >gi|149928337|ref|ZP_01916578.1| NAD synthetase [Limnobacter sp. MED105] gi|149822922|gb|EDM82167.1| NAD synthetase [Limnobacter sp. MED105] Length = 544 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 227/557 (40%), Positives = 319/557 (57%), Gaps = 17/557 (3%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 AIAQLN VGD+ GN AK +A QG+ ++L EL I+GYPPEDL+ + SF + Sbjct: 2 AIAQLNLTVGDLKGNCAKILEYAHKAAAQGVRILLTPELSITGYPPEDLLLRPSFQRQTD 61 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 +A + L+ + +VVG P + + N+ +L G ++ + K +LPN F E+R Sbjct: 62 TAFEHLRQELAALDLYVVVGHPVSREGELFNAASVLYKGQVVGMYHKHDLPNREVFDEQR 121 Query: 128 TFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 F IR G+ ICED W AE L NASPY+ K R Sbjct: 122 YFTPDNRPLVFEVDGIRFGLNICEDTWNRYAPEAAAAAG-AEVLLVPNASPYHMGKQTIR 180 Query: 188 HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY 247 +V ++ + I+Y N +GGQDEL+FDGASF DG+Q +A ++ F E M + Sbjct: 181 QSMVAKRVQETGMAIVYANMLGGQDELVFDGASFAMDGKQHVAMRLPQFQEALAMLDA-- 238 Query: 248 DQQLSQWNYMSDDSASTMYIPLQE-EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 +++ A +P E Y A + + DYV KN F IIGLSGG+DSA Sbjct: 239 ---VARPGEPIVLEAHQPCVPELELTAQVYEALKMGVHDYVTKNRFPGAIIGLSGGVDSA 295 Query: 307 LCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 + AIAVDALG + V+ +M+P YT+ SL+D+ + LG +YD + I D +N F S + Sbjct: 296 ITLAIAVDALGADKVRAVMMPSPYTADISLDDSRDMVRRLGIQYDEISIQDCMNAFDSSL 355 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + + + EN+Q+RIRG +LMA+SN + ++LTT NKSE++ GY TLYGDM+GGF Sbjct: 356 APLFKGLAADTTEENLQARIRGTMLMAISNKTGRIVLTTGNKSEMATGYCTLYGDMAGGF 415 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPY 486 +KD++KT V+QL +RNS L+EVIP I+ + PSAELRP Q DQ+SLPPY Sbjct: 416 AVIKDIFKTLVYQLCEYRNS---------LSEVIPTRIITRPPSAELRPDQVDQDSLPPY 466 Query: 487 PILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR 545 +LD I+ R +E +ES N + E V LL +EYKRRQAPVG ++T ++FGR Sbjct: 467 DVLDAILARYMEKDESVENIVASGFQKEDVFKAVKLLRINEYKRRQAPVGIRVTHRAFGR 526 Query: 546 DRLYPISNKFRDHISEE 562 D YPI++KF D + Sbjct: 527 DWRYPITSKFNDLEGFQ 543 >gi|326577687|gb|EGE27563.1| NAD+ synthetase [Moraxella catarrhalis O35E] Length = 563 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 226/554 (40%), Positives = 318/554 (57%), Gaps = 19/554 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEI---EGIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIW-HDEPIQALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + + + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 RFDIQNK-------TFDTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKFR 556 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGWS 560 >gi|124514781|gb|EAY56293.1| NAD+ synthase [Leptospirillum rubarum] Length = 592 Score = 601 bits (1550), Expect = e-169, Method: Composition-based stats. Identities = 230/602 (38%), Positives = 329/602 (54%), Gaps = 57/602 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++KLK+A+AQ NP+VGDI GN+A + +A + +D+++F EL ++GYPPEDL+ K S Sbjct: 1 MRKLKLALAQTNPIVGDIPGNLAHIKDMILQARSEHVDVVVFPELALTGYPPEDLLLKPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI A+D L + ++VGF + + + N+ +L G + + K LPNY Sbjct: 61 FIDKNLRALDELLGFAPEL--LVLVGFVDRQDD-IYNAAAVLHGGKLHGIYRKQYLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F G + + +R RLGI ICEDIW G AE + +L+ASP++ Sbjct: 118 VFDENRYFQEGVESPVLEYRSARLGINICEDIWYPKGPLYTQTLMGDAECILNLSASPFH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R ++ + I YVN VGGQDEL+FDG S ++ + K F E Sbjct: 178 AGKREVRENMLCTRAVDSACYIAYVNMVGGQDELVFDGQSLVISPDGEIESRGKAFQEDL 237 Query: 241 FMTEWHYDQQLS------------------QWNYMSDDSASTMYI--------------- 267 +TE D + + DD I Sbjct: 238 LITEIDLDHVFRVRLHDPRRRKDRLSQSLDRPQWNQDDVLVRWKIEEAGRRQAPGGARPE 297 Query: 268 -----------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 PL Y A V +RDYV+KN+F +V++GLSGGIDSAL AAIA DAL Sbjct: 298 KKVLVKSPYTQPLDRLSEIYEALVTGVRDYVRKNSFREVLVGLSGGIDSALVAAIATDAL 357 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 G E+V + +P +TS +S ED + L + +PI F ++S Q+ P Sbjct: 358 GAEHVHGLFMPSMFTSQESYEDVLKLSGTLKVHVETIPIGAAFEQFLQILSPHFQDRPRD 417 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 EN+QSRIRG +LMALSN ++LTT NKSE+SVGY TLYGDM+GGF+ LKD+ KT Sbjct: 418 TAEENLQSRIRGLLLMALSNKFHWLVLTTGNKSEMSVGYQTLYGDMAGGFSVLKDVPKTL 477 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 V+ LA + N+ ++IP I+EK+P+AELRP+Q D +SLPPY ILD I++ Sbjct: 478 VYDLADFLNTRR--------ADIIPHRIIEKAPTAELRPNQKDLDSLPPYEILDPIMEAY 529 Query: 497 VENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 VE+++ F + ++ TV V L+ SEYKRRQ+P G K+T ++FG+D PI+N+F Sbjct: 530 VEDDQGFEEIVGKGFDPATVARVLSLIDKSEYKRRQSPPGIKLTLRAFGKDWRVPITNRF 589 Query: 556 RD 557 ++ Sbjct: 590 KE 591 >gi|326564236|gb|EGE14470.1| NAD+ synthetase [Moraxella catarrhalis 46P47B1] Length = 563 Score = 601 bits (1550), Expect = e-169, Method: Composition-based stats. Identities = 226/554 (40%), Positives = 318/554 (57%), Gaps = 19/554 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEI---EGIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIW-HDEPIQALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + + + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 RFDTQNK-------TFDTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKFR 556 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGWS 560 >gi|254415451|ref|ZP_05029211.1| NAD synthase family [Microcoleus chthonoplastes PCC 7420] gi|196177632|gb|EDX72636.1| NAD synthase family [Microcoleus chthonoplastes PCC 7420] Length = 586 Score = 601 bits (1549), Expect = e-169, Method: Composition-based stats. Identities = 213/587 (36%), Positives = 323/587 (55%), Gaps = 44/587 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQLNP +GD+ N K A +A RQG+ L+L EL + GYPP DL+ SF++ Sbjct: 1 MKLAIAQLNPTIGDLTSNAQKILDAANQAARQGVRLLLTPELSLCGYPPRDLLLNPSFME 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEG---VLNSVVILDAGNIIAVRDKINL 117 + + +D L ++VG P+ + G + NS+ +L+ G I V K L Sbjct: 61 SMADCLDNLAEQLP-STLAVLVGTVTANPKAESSGGKPLFNSIALLEGGKIQQVFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR-----DIRLGILICEDIWKNS----------NICKH 162 P Y F E R F +G ++ I++G+ ICED+W + N Sbjct: 120 PTYDVFDENRYFEAGVQSNSFTLEAESATPIKIGVTICEDLWNDEEFWGKRTYQFNPITD 179 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L +Q + + +L+ASPY K + R ++ PI+Y NQVGG D+LIFDG+S Sbjct: 180 LNQQNVDLIVNLSASPYSVGKQQLREAMLQHSAKRYQQPILYANQVGGNDDLIFDGSSVG 239 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 F+ ++ + F + ++ Q + ++ P ++A VL Sbjct: 240 FNRAGEMVCRAPAFETDVLLVDFDPVQGDLLKSAIAP-------APESTNAQIWSALVLG 292 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 ++DY +K F +V+IGLSGGIDS+L AA+A +ALG+ENV +++P ++S S+ DA A Sbjct: 293 IQDYARKCGFKRVVIGLSGGIDSSLVAALATEALGRENVLGVLMPSPHSSEHSINDALAL 352 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 AK LG K LPI +L+ + + G ENIQ+RIRGN+LMA++N +L Sbjct: 353 AKNLGIKTHTLPIGELMQGYDQTLDPLFAGTEFGTAEENIQARIRGNLLMAIANKFDYLL 412 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT----- 457 ++T NKSE++VGY TLYGDM+GG + D+ KT+V+ L W NS + T Sbjct: 413 ISTGNKSEMAVGYCTLYGDMNGGLAAIADVPKTRVYSLCQWLNSTKVKRQESQATPEQLP 472 Query: 458 --------EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQ 508 E+IP ++L K PSAEL+P QTDQ+SLP Y ILDDI++R++ + +S D Sbjct: 473 AQLSDTQPEIIPANVLAKPPSAELKPDQTDQDSLPSYDILDDILQRLIHDHQSAPQIIDA 532 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ E V V ++ +E+KRRQAP G KIT ++FG PI++++ Sbjct: 533 GHDPEIVHKVMRMVARAEFKRRQAPPGLKITDRAFGTGWRMPIASRW 579 >gi|326561328|gb|EGE11686.1| NAD+ synthetase [Moraxella catarrhalis 7169] Length = 563 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 226/554 (40%), Positives = 317/554 (57%), Gaps = 19/554 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEI---EGIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIW-HDEPIYMLKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + + + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 RFDIQNK-------TFDTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGSDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKFR 556 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGWS 560 >gi|152967241|ref|YP_001363025.1| NAD+ synthetase [Kineococcus radiotolerans SRS30216] gi|151361758|gb|ABS04761.1| NAD+ synthetase [Kineococcus radiotolerans SRS30216] Length = 599 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 216/587 (36%), Positives = 313/587 (53%), Gaps = 39/587 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ++ VGD+ GN+A A + G L+LF E ++GYP EDL + S Sbjct: 1 MPQLRVAMAQVDTTVGDLDGNVAVILDWTRRAAQDGAHLVLFPETAVTGYPVEDLALRTS 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVGFPRQDQEGVL-----------NSVVILDAGN 107 F+ A A+ L D G +VVG+ + E N +L G Sbjct: 61 FVDASRRAVGRLARRLADDGFGDVTVVVGYVDRVGEDARPGAGGPRRLPQNCAAVLHGGR 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 ++A K +LPNY F E R F+ G + R + + + ICED+W++ + G Sbjct: 121 VVARYAKHHLPNYGVFDEYRIFVPGDDLLVVRVRGVDVAVAICEDLWQDGGPVQMAGDAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 A L LNASPY +K R E+V + + PI YVN VGGQDEL+FDG S Sbjct: 181 AGLLAVLNASPYERDKDDVRLELVARRAAEAGCPIAYVNAVGGQDELVFDGDSLVVAAGG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS---------------DDSASTMYIPLQEE 272 + + F E +T+ ++ + + AS + PL + Sbjct: 241 TVLARGPQFREALVVTDLDLPAGVTTPGWEEHVQRVTVTAEAVPAYEPRASEVLQPLPDV 300 Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 + A VL LRDYV+KN F V++ +SGGIDSAL A++A DA+G ENV I LP Y+S Sbjct: 301 AEVHGALVLGLRDYVRKNGFRSVVVAVSGGIDSALVASLACDAIGPENVLGISLPSGYSS 360 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 S +DA A G +Y PI +V F + G+ EN+Q+R+RG +M Sbjct: 361 QHSRDDAEDLANRCGFEYRQYPIAPMVEAFLGTVP------LRGVAEENLQARVRGTTIM 414 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 ++N + L TSNKSE++VGY TLYGD GG+ PLKD+ KT V++L+ WRN+ ++ G Sbjct: 415 GIANQEGHLTLATSNKSELAVGYSTLYGDSVGGYAPLKDVPKTLVWELSRWRNAEALSRG 474 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYN 511 P IP + + K PSAELRP QTDQ+SLPPY +LD I++ VE + + ++ Sbjct: 475 EQP---PIPENTITKPPSAELRPDQTDQDSLPPYEVLDAILEDYVEGDRGRAEMLEAGFD 531 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 V V L+ +E+KRRQ G KI+ K+FGRDR PI+N++R+ Sbjct: 532 ATVVDSVVTLVDRAEWKRRQFAPGPKISYKAFGRDRRLPITNRWREP 578 >gi|326569726|gb|EGE19776.1| NAD+ synthetase [Moraxella catarrhalis BC8] Length = 563 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 226/554 (40%), Positives = 318/554 (57%), Gaps = 19/554 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEI---EGIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIW-HDEPIQALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + + + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 RFDIQNK-------TFDTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYDTLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKFR 556 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGWS 560 >gi|259416895|ref|ZP_05740815.1| glutamine-dependent NAD+ synthetase [Silicibacter sp. TrichCH4B] gi|259348334|gb|EEW60111.1| glutamine-dependent NAD+ synthetase [Silicibacter sp. TrichCH4B] Length = 552 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 241/559 (43%), Positives = 340/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I +AQLNP VGD+AGN AKA A +E G DL+ E+FI+GY +DLV K Sbjct: 1 MADSFRITLAQLNPTVGDLAGNAAKALSAWQEGRESGADLVALPEMFITGYNTQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F QA + ++ L + T + G + +G P + + N+ +IL G I + K +LPN Sbjct: 61 AFHQAAIAEVEALAAATAE-GPALAIGSPWVEDGKLFNAYLILKGGKIASKCLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L++ GAEFL N SPYY Sbjct: 120 TVFDEVRIFDAGPLGGPYSVGNTRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ R+ + + LP+IY+N VGGQD+ +FDG +F + LA QM F E Sbjct: 179 RGKMETRYNHMVARAVETGLPVIYLNMVGGQDDQVFDGGTFALNPHGALAVQMPVFDEC- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + ++ W + A E DY VLSLRDY+ K F K ++GLS Sbjct: 238 -IAQLDLERTADGWRIKEGEKAHLP----DAWEQDYRTMVLSLRDYMGKTGFKKALLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDALG +NV+ +MLP +YTS SLEDA A AKALG YD +PI + Sbjct: 293 GGVDSAIVAAIAVDALGAQNVRCVMLPSEYTSKDSLEDAEAVAKALGVHYDYVPISEGRE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFAGRDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI P++++K PSAELR Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPSGEVIRPNVIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I+ +V+ + S + ++ + + VEHLLY SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDAILDILVDQDGSIADCVAAGFDRDVAKRVEHLLYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 533 KRAFWLDRRYPIVNRWRDP 551 >gi|149915731|ref|ZP_01904256.1| NAD(+) synthase [Roseobacter sp. AzwK-3b] gi|149810313|gb|EDM70158.1| NAD(+) synthase [Roseobacter sp. AzwK-3b] Length = 552 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 236/559 (42%), Positives = 330/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ +AQ NP +GD+ GN ARRA G +L+ E+FI+GY +DLV K Sbjct: 1 MADSFRLTLAQWNPTMGDLDGNADLARRAWRTGREAGANLVALPEMFITGYNTQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F A +AI++L D D G + +G P + N+ IL G I + K +LPN Sbjct: 61 AFHTAAIAAIESLARDCAD-GPALAIGGPALQDGVLYNAYYILQEGRIASRVFKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F EKR + +G P +R+G ICED W ++ + L + GA+ L N SPYY Sbjct: 120 TVFDEKRIYAAGAVTGPYAVDGLRIGSPICEDSW-YEDVAETLAETGAQILLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL RH+I+ ++ LP+IY+N VGGQD+ +FDG SF + LA QM E Sbjct: 179 RQKLSHRHQIMVARVIETGLPLIYLNLVGGQDDQVFDGGSFALNPGGALALQMPLMQEAT 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + W D A Q+ Y+A VLSLRDY++K F KV++GLS Sbjct: 239 --AHLDLTRTEDGWRITPSDLAPVPDAMEQD----YHAMVLSLRDYLRKTGFRKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A +AVDALG ENV+ +MLP YTS SL+DA A+ LGC+YD +PI + Sbjct: 293 GGIDSALVACVAVDALGPENVRCVMLPSDYTSQASLDDAETLARTLGCRYDTVPIAEGRQ 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + I ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITRTLAPLFEGTAPDITEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NPLKD+YKT+VF WRN+ +GP+ VIP ++++ PSAEL P Q D+ Sbjct: 413 DMAGGYNPLKDMYKTRVFDTCRWRNTVHRDWMMGPVGAVIPQRVIDRPPSAELAPDQRDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I++ +V+ + S + ++ VEHLLY SEYKR Q+ GT+++ Sbjct: 473 DSLPAYSVLDGILEILVDQDGSIADCVAAGFDRADASRVEHLLYISEYKRFQSAPGTRLS 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI+N++RD Sbjct: 533 KRAFWLDRRYPIANRWRDK 551 >gi|311693416|gb|ADP96289.1| NAD+ synthetase [marine bacterium HP15] Length = 538 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 217/550 (39%), Positives = 316/550 (57%), Gaps = 19/550 (3%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 +AQL+ +VGDI GN A A+ D+++F EL ++GYPPEDL+ + S + Sbjct: 3 MAQLDFLVGDIPGNTELVLDAARRASSEHQADVVVFPELCLTGYPPEDLLLRPSMEVRVN 62 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 A++ L+++ IV+G P + + N+ V++DAG I K PNY F EKR Sbjct: 63 EALERLQAE--RLDPVIVIGAPLRHGALLYNAAVVIDAGEITGRYFKRFPPNYQVFDEKR 120 Query: 128 TFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 F G + R + +GI +CED+WK + GA + +LNASPY +K +R Sbjct: 121 YFAEGRDVLTLDIRGVPVGITVCEDLWK-EGPVEDCAAAGARLILNLNASPYDIDKQARR 179 Query: 188 HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY 247 ++ + + I+YVN VGGQDEL+FDG S FD L + F E + ++ Sbjct: 180 KALLERKSRENLVSIVYVNLVGGQDELVFDGGSMVFDHSGVLTAEAPQFGEGLYPVDFLC 239 Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + + + + Y A V +RDYV KN F V++GLSGGIDSA+ Sbjct: 240 EHHCQPVSQALPEEPTLE-------ANVYRALVTGVRDYVNKNGFKSVVLGLSGGIDSAV 292 Query: 308 CAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A+AVDALGK+ V+ +M+P++YTS SLEDA A A ALG +YDV I + + F ++ Sbjct: 293 TLAVAVDALGKDRVRAVMMPFRYTSSMSLEDAEAEAVALGVQYDVFSIEPMYDAFMETLA 352 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + EN+Q+R+RG +LM+LSN +++LTT NKSE++VGY TLYGDM+GGF+ Sbjct: 353 GPFEGTTPDTTEENLQARLRGVLLMSLSNKFGSLVLTTGNKSEMAVGYSTLYGDMAGGFD 412 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYP 487 LKD+ KT VF+LA +RN+ EVIP ++ + PSAEL P Q D++SLP Y Sbjct: 413 VLKDVPKTLVFRLAKYRNTLS-------EGEVIPERVITRPPSAELAPDQKDEDSLPGYD 465 Query: 488 ILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRD 546 +LD I+ VE + S + + V V L+ +EYKRRQAP+G +IT + FG+D Sbjct: 466 VLDQILNLYVERDFSADAIVAEGFERVDVERVIRLVDINEYKRRQAPIGVRITERGFGKD 525 Query: 547 RLYPISNKFR 556 R YPI+N ++ Sbjct: 526 RRYPITNGWK 535 >gi|126737475|ref|ZP_01753210.1| NAD synthetase [Roseobacter sp. SK209-2-6] gi|126722060|gb|EBA18763.1| NAD synthetase [Roseobacter sp. SK209-2-6] Length = 552 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 242/559 (43%), Positives = 345/559 (61%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I++AQLNP VGD+ GN AKAR+A E + DL+ E+F++GY +DLV K Sbjct: 1 MADRFRISLAQLNPTVGDLDGNAAKARQAWTEGRKAKADLVALPEMFLTGYNAQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F A + + L D D G + +G P + + N+ +IL G I + K +LPN Sbjct: 61 VFHLAAMAKAEELAKDCAD-GPALAIGCPWVEDGKLYNAYLILKDGKIASRCLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L++ GAEFL N SPY+ Sbjct: 120 TVFDEVRIFDAGPLGGPYAVGNTRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R + + LP+IY+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RNKMEVRQNHMVARAVETGLPVIYLNMVGGQDDQVFDGGSFVLNPNGALALQMPVFDEC- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 MT+ ++ W + + A E E DY V +LRDY++K+ F KV++GLS Sbjct: 238 -MTQLDLERAPEGWRAIEGEKAHLP----DEWEQDYRVMVEALRDYLRKSGFQKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDA+G ENV+ +MLP +YTS +SL+DA A A+ALG YD +PI + Sbjct: 293 GGVDSAIVAAIAVDAIGAENVRCVMLPSEYTSRESLDDAEAVAEALGVHYDYVPITEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFEGRDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN + +GP EVI P++++K PSAELR Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNDNHRPWMMGPAGEVIRPNVIDKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I++ +V+ + S + + ET + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDAILEILVDQDGSIADCVAAGFEAETAKRVEHLVYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N+FRD Sbjct: 533 PRAFWLDRRYPIVNRFRDQ 551 >gi|110678543|ref|YP_681550.1| NAD synthetase [Roseobacter denitrificans OCh 114] gi|109454659|gb|ABG30864.1| glutamine-dependent NAD(+) synthetase [Roseobacter denitrificans OCh 114] Length = 552 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 240/559 (42%), Positives = 328/559 (58%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + Q+NP VGD+AGN A AR E G DL+ E+FI+GY +DLV K Sbjct: 1 MADRFRITLGQMNPTVGDLAGNAALAREVWEAGKTAGADLVALPEMFITGYNAQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + +D L D D G + +G P + + N+ +IL G I++ K +LPN Sbjct: 61 AFQLDVARHVDRLAQDCAD-GPTLAIGAPWVEGTRLYNAYLILKGGKIVSQVLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P + R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRIFDAGPLGGPYSVGNSRVGSPICEDAW-HEDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ LP+IY+N VGGQD+ +FDGASF + LA Q+ F E Sbjct: 179 RGKFDTRLNHMVARVIETELPLIYLNMVGGQDDQVFDGASFGLNPGGNLAVQLPVFDEAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + Q + E DY V +LRDY +K F KV++GLS Sbjct: 239 AHVDLERGPQGWRI------VEGEKAHHPDAWEQDYRVMVQALRDYCRKTGFGKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AAIAVDALG +NV+ +MLP +YTS +SLEDA A AKALGC YD +PI + Sbjct: 293 GGVDSALVAAIAVDALGAQNVRCVMLPSEYTSAESLEDAEAVAKALGCHYDYVPITEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AIEQTLAPLFEGRGADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN GP EVI P +++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNKTHRDWMKGPQGEVITPRVIDKPPSAELRADQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD +++ +V+ S + +D ET R +EHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPELDRLLEILVDRNGSIEDCVAAGSDVETARKIEHLIYISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 +F DR YPI N++RD Sbjct: 533 KGAFWLDRRYPIVNRWRDR 551 >gi|313903243|ref|ZP_07836636.1| NH(3)-dependent NAD(+) synthetase [Thermaerobacter subterraneus DSM 13965] gi|313466554|gb|EFR62075.1| NH(3)-dependent NAD(+) synthetase [Thermaerobacter subterraneus DSM 13965] Length = 621 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 233/617 (37%), Positives = 337/617 (54%), Gaps = 69/617 (11%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L+IA+AQ+N VGD+ GN K R +A + G DL++F EL ++GYPPEDLVF+ +F+ Sbjct: 7 PLRIAVAQVNVTVGDLEGNARKLARFAADAAQTGADLVVFPELALTGYPPEDLVFRPAFL 66 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + L + G + VGF +D++ + N+ +L G I AV K LPNY F Sbjct: 67 DATRHWLGWLAGELAAGPVAL-VGFVHRDRD-LYNAAAVLQGGQIKAVACKRFLPNYGVF 124 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYYHN 182 EKR F G + R + LG+ ICED+W + G AE L +L+ASPY+ Sbjct: 125 DEKRYFAPGRRALVLHLRGVALGVSICEDLWYPHGPIREQALAGGAEILLNLSASPYHMG 184 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K ++R ++ + + + + I+Y N VGGQDEL+FDG S D Q+A + + F+E F Sbjct: 185 KPREREGLLITRATDLGVAIVYANLVGGQDELVFDGHSLVVDAGGQVAARGRPFAEDLFF 244 Query: 243 TEWH---------YDQQLSQWNYMSDDSASTMYIPLQEEEAD------------------ 275 ++ ++ + +++A ++ L E A Sbjct: 245 WDYDPAAAAVARWHEPRYRHMPVTPEEAAQVEHVDLDEPAAGGGPGGRLPGPVAGPGVAV 304 Query: 276 -------------------------------YNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Y A VL+LRDY +KN F + +GLSGGID Sbjct: 305 PGVAGPGTAPEASRPPLPPRQVEVLEGEAEVYAALVLALRDYFEKNGFRRAWLGLSGGID 364 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A +A DALG V + +P +TS SL+DA A A+ LG + +PI ++ F Sbjct: 365 SALVACLAADALGPRQVTGVRMPSPFTSAASLDDAEAVARNLGIGLETIPIGEIFGAFRQ 424 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + P + EN+Q+RIRG +LMAL+N ++L T NKSE++ GY TLYGDM+G Sbjct: 425 ALAPLFGDRPFDVAEENLQARIRGTLLMALANKFGGLVLATGNKSELATGYATLYGDMAG 484 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF PLKD+ KT V++LA++RN P VIP S+LEK+P+AELRP Q D++SLP Sbjct: 485 GFAPLKDVPKTLVYRLAAYRNGW-------PGGPVIPRSVLEKAPTAELRPGQKDEDSLP 537 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD I++ VE + + E VR HL+ SEYKRRQA G KITA++F Sbjct: 538 PYAVLDPILEAYVERDLPAAALVARGLPAEAVRRTVHLVATSEYKRRQAAPGPKITARAF 597 Query: 544 GRDRLYPISNKFRDHIS 560 GRDR YPI++ +R+ + Sbjct: 598 GRDRRYPITSGYREAVP 614 >gi|297183634|gb|ADI19760.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04] Length = 538 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 226/555 (40%), Positives = 329/555 (59%), Gaps = 19/555 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+N +VGDI GN + + + G+D+++F EL ++GYPPEDL+ ++ Sbjct: 1 MKIVMAQINTLVGDIKGNTQRILDVCVDQSALGVDMVVFPELTLTGYPPEDLLLRQHTTD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++A++ L D D G +VVG+PR+ + NS +L G ++A DK LPNY F Sbjct: 61 LTAAALERLCQDLPD-GLAVVVGYPRRQGGLLFNSAGVLYNGAVVAEYDKQCLPNYQVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F +G + +D+ +G+ ICEDIW + + GA+ L +LNASP++ K Sbjct: 120 EKRYFEAGADTCVVTIKDLPIGLTICEDIW-HPQPAANAAAAGAQLLINLNASPFHRGKQ 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +R V+ LPI+YVNQVGGQDEL+FDG SF D + + + F+E E Sbjct: 179 SERTAQVSALARTHQLPILYVNQVGGQDELVFDGGSFVVDARGDVQHRAIEFAEVMLSVE 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 QL ++ + PL E +A + VL +RDYV KN F V++GLSGGID Sbjct: 239 IETSPQLKV-------ASGALATPLDELDAVWQVLVLGMRDYVNKNGFPGVVLGLSGGID 291 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+ A+AVDALG E V+ +M+P++YT+ S+EDAA A G + I L F + Sbjct: 292 SAVTLAVAVDALGPERVEAVMMPFRYTASMSIEDAAEQANTQGVAFSNRSIEPLYEAFMT 351 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + I EN+Q+R RG +LM++SN ++LTT NKSE++VGY TLYGDM+G Sbjct: 352 TLAPAFEGLEPNITEENLQARCRGVLLMSISNKKNLLVLTTGNKSELAVGYSTLYGDMAG 411 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF+ LKD K V+ LA +RN+ L + IP ++ + PSAEL P Q D++SLP Sbjct: 412 GFDVLKDCPKMLVYALAQYRNT---------LGQCIPERVISRPPSAELAPDQKDEDSLP 462 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD II+ VE + S + ++ E V V L+ +EYKRRQAPVG +I+ ++F Sbjct: 463 PYEVLDQIIEHYVERDASRDDMIAAGFSPEDVHRVVRLIDLNEYKRRQAPVGVRISPRAF 522 Query: 544 GRDRLYPISNKFRDH 558 GRDR YPI+ +R Sbjct: 523 GRDRRYPITWAWRSP 537 >gi|149377768|ref|ZP_01895501.1| NAD synthase [Marinobacter algicola DG893] gi|149357940|gb|EDM46429.1| NAD synthase [Marinobacter algicola DG893] Length = 550 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 225/555 (40%), Positives = 328/555 (59%), Gaps = 21/555 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKKSF 62 KL++ +AQL+ +VGDI GN K A A ++ DL++F EL ++GYPPEDL+ + S Sbjct: 12 KLRVVMAQLDFLVGDIPGNTQKVIEATRRAEQEHQADLVVFPELCLTGYPPEDLLLRPSM 71 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + A++TL+ + G I+VG P ++ + N+ V ++ GNI K PNY Sbjct: 72 DVRVADALETLRGE--HLGPAIIVGAPIREGALLYNAAVAIEQGNITGRYFKRFPPNYQV 129 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F +G + + + +GI ICEDIW + + GA + +LNASPY + Sbjct: 130 FDEKRYFANGVDTLVMDIKGVPVGITICEDIW-SEGPVEDAAAAGARLVVNLNASPYDID 188 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K +R +V + + I+YVN +GGQDEL+FDG S +D LA + FSE + Sbjct: 189 KQVRRKALVERKAFENRVSIVYVNLIGGQDELVFDGGSVVYDHSGVLAAEAPQFSEGLYP 248 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++ + + S E Y A VL +RDYV KN F V++GLSGG Sbjct: 249 VDFVCEHHCQPIPQPAIAEPSLE-------ENVYKALVLGVRDYVNKNGFKSVVLGLSGG 301 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+ AIA DALG + V+ +M+P++YTS S+EDA A A ALG +YDV I + + F Sbjct: 302 IDSAVTLAIAADALGADRVRAVMMPFRYTSGMSIEDAEAEAVALGVQYDVFSIEPMYDAF 361 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + EN+Q+R+RG +LM+LSN +++LTT NKSE++VGY TLYGDM Sbjct: 362 METLAAPFEGTKPDTTEENLQARLRGVLLMSLSNKFGSLVLTTGNKSEMAVGYSTLYGDM 421 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF+ LKD+ KT VF+LA +RNS +++VIP ++ + PSAEL P Q D++S Sbjct: 422 AGGFDVLKDVPKTLVFRLAWYRNS---------VSQVIPERVITRPPSAELAPDQKDEDS 472 Query: 483 LPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LP Y +LD I+ VE + S Q ++ V V L+ +EYKRRQAP+G +IT + Sbjct: 473 LPGYDVLDQILNLYVERDLSADAIVAQGFDRADVDRVVRLVDINEYKRRQAPIGVRITER 532 Query: 542 SFGRDRLYPISNKFR 556 FG+DR YPI+N ++ Sbjct: 533 GFGKDRRYPITNGWK 547 >gi|296112564|ref|YP_003626502.1| NAD+ synthetase [Moraxella catarrhalis RH4] gi|295920258|gb|ADG60609.1| NAD+ synthetase [Moraxella catarrhalis RH4] gi|326571668|gb|EGE21683.1| NAD+ synthetase [Moraxella catarrhalis BC7] Length = 563 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 226/554 (40%), Positives = 317/554 (57%), Gaps = 19/554 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEI---EGIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIW-HDEPIYMLKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + + + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 RFDTQNK-------TFDTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 Y LD I+K ++++ + + +TV + ++ +EYKRRQ +GTKIT KS Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKTVEKILGMVDRAEYKRRQGAIGTKITKKS 546 Query: 543 FGRDRLYPISNKFR 556 FGR+R YP+ N + Sbjct: 547 FGRERRYPLVNGWS 560 >gi|114321696|ref|YP_743379.1| NAD+ synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|114228090|gb|ABI57889.1| DNA-directed RNA polymerase, subunit H [Alkalilimnicola ehrlichii MLHE-1] Length = 541 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 227/554 (40%), Positives = 326/554 (58%), Gaps = 23/554 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSF 62 L++ +AQL VGDI GN + A E A + G L++F EL ++GYPP+DL+ + F Sbjct: 2 SLRVTMAQLTCPVGDIEGNTRRIVGAIETARDREGAQLVVFPELAVTGYPPDDLLLRDDF 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 +A +A+ +++ + G VVG P +D+ G+ N+ V++ G +IA K LP YS Sbjct: 62 TRAAENALQAIQAASR--GVTAVVGVPLRDRRGLHNAAVVVQDGRVIARYAKRELPTYSV 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F + R F++G S + R+G+ ICEDIW + + GAEF+ +LNASP++ Sbjct: 120 FDDSRHFVAGDSPCVVDVAGTRVGLSICEDIWWPT-PAREAVAAGAEFVVNLNASPFHRR 178 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K +R ++ + H P++YVN VGG DE+++DG S D + + F Sbjct: 179 KQAEREAVLRERALDTHRPLLYVNMVGGHDEVVYDGGSLAVDAGGTVQARAPRFRSGLCT 238 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E D + S EE A Y A V LRDYVQ+N F V++GLSGG Sbjct: 239 VEVDTDHGNVNGEQSTQPS---------EEGAVYQALVTGLRDYVQRNGFPGVVLGLSGG 289 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+ AA+AVDALG + VQ +M+P +YT+P SL+DA A A+ LG +Y I + F Sbjct: 290 IDSAVAAAVAVDALGADRVQAVMMPSRYTAPMSLDDAQAIARMLGIRYQTTSIEPIFQSF 349 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 S ++ + + EN+QSRIRG +LMALSN + M+L NKSE++VGY TLYGDM Sbjct: 350 LSSLAPSFEGLDPDVTEENLQSRIRGTLLMALSNKTGRMVLACGNKSELAVGYATLYGDM 409 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 GG+ PLKD+YKT+V++LA +R S L P +I + P+AEL Q D++S Sbjct: 410 CGGYAPLKDVYKTEVYRLARYRQS---------LKPAFPDNIFSRPPTAELAAGQKDEDS 460 Query: 483 LPPYPILDDIIKRIVENEES-FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPYP+LDDI++R VE++ES + + TV V LL +EYKRRQ+ G K+T + Sbjct: 461 LPPYPVLDDILERYVEHDESEALIVAAGHEPATVAQVTRLLRRNEYKRRQSAPGPKVTPR 520 Query: 542 SFGRDRLYPISNKF 555 +FGRDR YPIS+ + Sbjct: 521 AFGRDRRYPISSGW 534 >gi|260221021|emb|CBA29170.1| Probable glutamine-dependent NAD(+) synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 562 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 228/567 (40%), Positives = 316/567 (55%), Gaps = 25/567 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 LK+ +AQLN +VGD+ GN+ K A A QG+ L+L EL I GY EDL + +FI Sbjct: 6 TLKLCVAQLNFIVGDLNGNVKKIVDAATHAYDQGVRLVLTPELSICGYAAEDLFLRPAFI 65 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG--------VLNSVVILDAGNIIAVRDK 114 QAC A+ ++ G +VVG P N+ +L G ++A K Sbjct: 66 QACDDAVKSVARQLAGLKGLSVVVGHPTGGDSRTRSVAIQSRFNAASVLREGQVVAHYAK 125 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEF 170 LPNY F E+R F G + +++G+LICED W + K+ GAE Sbjct: 126 RELPNYQVFDERRYFSPGQGVCVFEAGEGASAVKVGLLICEDAW-FEEPARLAKEAGAEL 184 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +NASP++ K +R + + LP++Y + VGGQDE++F+G SF D Q + Sbjct: 185 LAVINASPFHVGKGYEREARMGERCRATGLPLVYAHLVGGQDEVVFEGHSFTLDAQGAVT 244 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + F E F+ + Q+ + + + E ++A VL +RDYV KN Sbjct: 245 GRAPSFKENLFVAQVARAQEAIKL-------VAVVEPERSAEADLWDALVLGVRDYVGKN 297 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F ++GLSGGIDSAL +AVDALG + V+ IM+P YT+ S DA A +G +Y Sbjct: 298 GFPGALLGLSGGIDSALVLTVAVDALGADKVRAIMMPSPYTADISWIDARDMAARMGVRY 357 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 D + I F + ++ ENIQ+RIRG +LMALSN +++LTT NKSE Sbjct: 358 DEISIVPEFEAFKASLAGEFAGRAEDTTEENIQARIRGTLLMALSNKFGSIVLTTGNKSE 417 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++ GY TLYGDM+GGF +KDL KT VF+LA WRN+H G IP I+ + PS Sbjct: 418 MATGYCTLYGDMAGGFAVIKDLAKTTVFKLAWWRNAHDP---YGTCASPIPERIITRPPS 474 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELRP Q DQ+SLPPY +LD I++R +EN+ES Y E V V L+ +EYKR Sbjct: 475 AELRPDQKDQDSLPPYEVLDGILERYMENDESMETIIAAGYRTEDVERVTRLIKINEYKR 534 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFR 556 RQAPVG ++T +SFG+D YPI+N+FR Sbjct: 535 RQAPVGIRVTHRSFGKDWRYPITNRFR 561 >gi|91788178|ref|YP_549130.1| NAD+ synthetase [Polaromonas sp. JS666] gi|91697403|gb|ABE44232.1| NAD+ synthetase [Polaromonas sp. JS666] Length = 562 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 228/571 (39%), Positives = 313/571 (54%), Gaps = 29/571 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 LKI +AQLN VGD+ GN K A A G+ L+L EL I GY EDL + SFI Sbjct: 2 TLKICVAQLNYCVGDMPGNAQKIIDAARTAYAGGVRLLLTPELAICGYAAEDLFLRPSFI 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG------------VLNSVVILDAGNIIA 110 QAC A++ + + G +VVG P G N+ +L G ++ Sbjct: 62 QACDDAVNLVARELAGLKGLTVVVGTPTGGDNGKGLRTKSVEVQQRHNAARVLREGRVLQ 121 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIR----LGILICEDIWKNSNICKHLKKQ 166 K LPNY F E+R F G D +G+LICED W + + Sbjct: 122 TYAKRELPNYQVFDERRYFTPGQGVCVFQAGDGADAISVGLLICEDAW-FEEPARLAQAA 180 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 GAE L +NASP++ K +R ++ ++ LP++Y + VGGQDE++F+G SF Sbjct: 181 GAEVLAVINASPFHVGKGGEREVMMRSRVLATGLPLVYAHLVGGQDEIVFEGHSFALQAD 240 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 LA + + F E F+TE + + + E ++A VL +RDY Sbjct: 241 GALAGRAESFKENLFLTEVER-------TSTAIKLIANIEPGRSHEADLWDALVLGVRDY 293 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 + KN F I+GLSGGIDSAL AIAVDALG + V+T+M+P YT+ S DA A+ L Sbjct: 294 LGKNGFPGAILGLSGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWVDAREMAQRL 353 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 +YD + I F + ++ + ENIQ+RIRG LMALSN +++LTT Sbjct: 354 KVRYDEISIVPEFEAFKASLAHEFKGLKEDTTEENIQARIRGVFLMALSNKFGSIVLTTG 413 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE++ GY TLYGDM+GGF +KDL KT VF+LA WRN + G IP ++ Sbjct: 414 NKSEMATGYCTLYGDMAGGFAVIKDLAKTTVFKLARWRNENDP---YGTGANPIPERVIT 470 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGS 525 + PSAELRP QTDQ+SLPPY +LD I++R +EN++S + V V L+ + Sbjct: 471 RPPSAELRPDQTDQDSLPPYEVLDAILERYMENDQSVEAIIAAGFERAVVECVARLIKIN 530 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 EYKRRQAPVG ++T +SFG+D YPI++KFR Sbjct: 531 EYKRRQAPVGIRVTHRSFGKDWRYPITSKFR 561 >gi|217970173|ref|YP_002355407.1| NAD synthetase [Thauera sp. MZ1T] gi|217507500|gb|ACK54511.1| NAD+ synthetase [Thauera sp. MZ1T] Length = 542 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 223/556 (40%), Positives = 328/556 (58%), Gaps = 23/556 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + IA+AQLN VGD+ GN A ++A G L+L EL +SGYPPEDL+ + F Sbjct: 8 PVSIAVAQLNLTVGDLVGNADHIIAALDDARAAGAQLLLTPELALSGYPPEDLLLRPDFY 67 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +AC+ ++ + + G +V+G P +D N+ +L G ++ K LPNY F Sbjct: 68 RACAREVERIAAAAR--GVTVVLGHPVEDGGERYNAASVLRDGAVLTRYHKSLLPNYEVF 125 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F +G + +R G+ IC D+W+ A+ L +LNASPY+ NK Sbjct: 126 DEERYFEAGGTACVFECAGVRFGVNICADVWERGPAEAARAAG-AQVLLALNASPYHMNK 184 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +R E++ +++ LP++Y N VGGQDEL+FDGASF D + Q+ F E+ + Sbjct: 185 QAQRLEVLRARVAETGLPVLYCNMVGGQDELVFDGASFALDAGGAVGLQLGSFVERVAIV 244 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++ + + + + Y A + +RDY+ KN F IIGLSGGI Sbjct: 245 DYASGGWSGGEHVPARTLEAEV----------YEALRIGVRDYLAKNRFPGAIIGLSGGI 294 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL AIAVDALG + V+ +M+P YT+ SL+D+ LG +YD + I + F Sbjct: 295 DSALTLAIAVDALGADKVRAVMMPSPYTAQMSLDDSRDMVARLGVRYDEIAIEPAMKVFA 354 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 L++ P+ EN+Q+RIRG +LMALSN + A++LTT NKSE++ GY TLYGDM+ Sbjct: 355 ELLADQFAGLPADTTEENLQARIRGMLLMALSNKTGAIVLTTGNKSEMATGYATLYGDMA 414 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF LKDLYKT VF+L++WRN+ ++ VIP +I+++ PSAEL+P Q DQ+SL Sbjct: 415 GGFAVLKDLYKTFVFRLSNWRNT---------VSPVIPQNIIDRPPSAELKPDQKDQDSL 465 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD II+ +E +ES + + + VR V +L +EYKRRQAPVG ++T + Sbjct: 466 PPYDMLDAIIQAYMERDESPRDIVAAGFPEGEVRRVVGMLKRNEYKRRQAPVGIRVTQRG 525 Query: 543 FGRDRLYPISNKFRDH 558 FGRD YPI+++++D Sbjct: 526 FGRDWRYPITSRYQDE 541 >gi|332528122|ref|ZP_08404153.1| NH(3)-dependent NAD(+) synthetase [Rubrivivax benzoatilyticus JA2] gi|332112693|gb|EGJ12486.1| NH(3)-dependent NAD(+) synthetase [Rubrivivax benzoatilyticus JA2] Length = 552 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 229/570 (40%), Positives = 327/570 (57%), Gaps = 37/570 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ N VVGD+AGN + A A QG L+L EL ++GYPPEDL+ + +F+Q Sbjct: 1 MKVALAQFNAVVGDLAGNSRRLEDAARRAYAQGARLVLAPELALTGYPPEDLLLRPAFMQ 60 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG------------VLNSVVILDAGNIIAV 111 AC+ A+ L D G +VVG P Q E N+ +L G + A Sbjct: 61 ACADALAALADVLRDCEGLHLVVGHPHQFGERGDLRTKSVTVQQRYNAASLLAGGRVQAT 120 Query: 112 RDKINLPNYSEFHEKRTFISGYSND----PIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 K LPNY F E+R F SG +R G++ICED W + + + G Sbjct: 121 YCKRELPNYQVFDERRYFASGRDAGLPPLVFDCEGLRFGVVICEDAWFD-EPARLARDAG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 A+ L LNASP++ K ++R + + V LP+++ + VGGQDE++FDGASF D Sbjct: 180 AQVLCVLNASPFHLGKAEERQARMAERARDVGLPLLFSHLVGGQDEVVFDGASFALDAAG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + F+E+ + ++ D + + D ++A V +RDY+ Sbjct: 240 EVRARAATFAEELLVVDFDADARPVGPVAEAPDLDRQA----------WDALVTGVRDYL 289 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 KN F IIGLSGGIDSAL A+AVDALG + V+ +M+P YT+ S DA A LG Sbjct: 290 GKNGFPGAIIGLSGGIDSALVLAVAVDALGADKVRAVMMPSPYTADISWIDARDMAARLG 349 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 +YD + I + + F + ++ EN+Q+RIRG +LMALSN + A++LTT N Sbjct: 350 VRYDEIDIAPMFDAFRTALAPQFAGLAEDTTEENLQARIRGTLLMALSNKTGAIVLTTGN 409 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++ GY TLYGDM+GGF +KD+ KT V++LA+WRN+ G EVIP I+ + Sbjct: 410 KSEMATGYCTLYGDMAGGFAVIKDVAKTLVYRLANWRNAQG--------AEVIPQRIITR 461 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSE 526 PSAELRP QTDQ+SLPPY +LD I+ R +E+++S + V V L+ +E Sbjct: 462 PPSAELRPDQTDQDSLPPYEVLDAILARYMEDDQSVEQIVAAGFERADVERVTRLIKINE 521 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 YKRRQAPVG +IT ++FGRD YPI+++FR Sbjct: 522 YKRRQAPVGIRITHRAFGRDWRYPITSRFR 551 >gi|307728981|ref|YP_003906205.1| NAD+ synthetase [Burkholderia sp. CCGE1003] gi|307583516|gb|ADN56914.1| NAD+ synthetase [Burkholderia sp. CCGE1003] Length = 579 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 227/585 (38%), Positives = 333/585 (56%), Gaps = 32/585 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQ+N VGD AGN+AK A +A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQINVTVGDFAGNVAKIVAAARDAHNAGAKLLVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQD----------------QEGV-----LNS 99 F A ++A+ L + G ++VG P +D + GV N+ Sbjct: 60 FYTASAAALRDLAAQLEPFAGLHVIVGHPLRDSANGANQGHGNANAPIERGVPPVDTFNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 +L G I+ K +LPN F EKR F S ++ G++ICED W +++ Sbjct: 120 ASLLVDGRIVGTYRKQDLPNTEVFDEKRYFASDPQPFVFELDGVKYGVVICEDAW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SP++ NK R +I+ +I LP++YVN VG QDEL+FDG Sbjct: 179 AQMAKAAGAQVLLIPNGSPFHLNKEAVRFDILRARIRETGLPMVYVNMVGAQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE---EEADY 276 SF D +L +M F E E+ + ++ S+ + E E Y Sbjct: 239 SFVLDAHGELVAKMPQFEETTAFVEFENGAPVRNQTSTANGSSGADHAIAPELTLEAQVY 298 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A V+ +RDYV KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S Sbjct: 299 AALVMGVRDYVNKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAVMMPSRYTADIST 358 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DAA A+ +G +YD + I + + F + ++Q P ENIQ+RIRG +LMALSN Sbjct: 359 TDAADMARRVGVRYDEIAIAPMFDAFRNSLAQEFAGRPEDATEENIQARIRGTLLMALSN 418 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN Sbjct: 419 KFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNQASTF----ER 474 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETV 515 VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Y E V Sbjct: 475 QNVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRSLAEIIAAGYAAEDV 534 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 + V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 535 KRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPVE 579 >gi|89055837|ref|YP_511288.1| NAD synthetase [Jannaschia sp. CCS1] gi|88865386|gb|ABD56263.1| NH(3)-dependent NAD(+) synthetase [Jannaschia sp. CCS1] Length = 552 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 224/558 (40%), Positives = 325/558 (58%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ +AQLNP +GD+ GN R A EA + D + F E+FI+GY DLV K+ Sbjct: 1 MADTFRLTLAQLNPTLGDLGGNAKLVREAFAEAKAEDSDFLAFPEMFITGYQLLDLVMKQ 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + I L ++ HD G +G P + N+ I + G I A K +LPNY Sbjct: 61 AFAEDVQRVIADLAAELHD-GPAFGIGGPMWGGDKPYNAYYICEGGKIAATILKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + S P+ +R+G ICED W ++C+ L++ GAE L S N SPY+ Sbjct: 120 AVFDEVRYYHSADPQGPVNINGVRIGFPICEDAW-FEDVCETLEESGAEILISPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K++ R +V ++ LP+ Y+N +GGQD+ +FDG SF + LA QM F Sbjct: 179 RGKMELRQSVVVSRVVETGLPMAYLNLLGGQDDQVFDGGSFVLNRGGALAVQMPQFEAGL 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ +++ D E + Y V++L DY++K F V++GLS Sbjct: 239 EQVDFAR----GDDGWVAKDGVKARLPEAYEAD--YRVMVMALGDYLRKTGFTSVVLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DA+G ENV +MLP ++TS SL+DA A LGC+ D +PI Sbjct: 293 GGIDSAIVACIAADAIGPENVHCVMLPSRFTSEVSLDDARDVAARLGCRLDTIPITPARE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + ENIQSR+RG +LMALSN +MLLTT NKSE++VGY T+YG Sbjct: 353 AVTASLAPLFEGLEEDVTEENIQSRLRGVMLMALSNKFGSMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN L P E+IPP +++K P+AELR Q D+ Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNREHRDWMLAPAGEIIPPRVIDKPPTAELREDQKDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD +++ +++ + S Y+ E VR +E L+Y SEYKR QA G ++T Sbjct: 473 DSLPPYAELDVMLEMLIDKDLSVAEVVAAGYDPEWVRKIERLIYLSEYKRFQAAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 K+F DR YP++N++RD Sbjct: 533 QKAFWLDRRYPVANRWRD 550 >gi|34497071|ref|NP_901286.1| NAD synthetase [Chromobacterium violaceum ATCC 12472] gi|34102928|gb|AAQ59292.1| glutamine-dependent NAD+ synthetase signal peptide protein [Chromobacterium violaceum ATCC 12472] Length = 530 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 221/553 (39%), Positives = 319/553 (57%), Gaps = 24/553 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ NPVVGDI GN K A QG D++L EL ++GY PEDL+ + SF + Sbjct: 1 MRIALAQFNPVVGDIVGNAQKIVDLANAALAQGADILLTPELALTGYSPEDLLLRDSFYR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +D ++ G ++VG P + N+ +L GN + K+ LPNY F Sbjct: 61 EVARGLDIIEQL---DGITVIVGHPARIGNERFNAATVLRDGNRLGQYHKMLLPNYEVFD 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G + +++G+LICED W+ + AE L SLNASP++ +K+ Sbjct: 118 ECRYFTPGAAPLVFEQNGVKVGVLICEDAWQLEPAAEAADAG-AELLLSLNASPFHRDKI 176 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + RH+++ ++ LP+ Y N VGGQDEL+FDG SF D +A Q + ++ + + Sbjct: 177 ETRHQVMRYRVEETGLPLAYANLVGGQDELVFDGGSFALDKAGNVAAQAAAYDDELLLVD 236 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + Y D +E+ Y A V+ +RDY+ KN F ++GLSGGID Sbjct: 237 FAYG----------DFQPGRQAALPGAQESVYRALVVGVRDYIGKNGFPGALLGLSGGID 286 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A+AVDALG + V +M+P +YT+ S+ D+ LG KYD + I + F + Sbjct: 287 SALTLAVAVDALGADKVHAVMMPSRYTADISVTDSRDMIGRLGVKYDEIEIWPMYESFMA 346 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ EN+Q+RIRG +LMALSN S ++LTT NKSE++ GY TLYGDM+G Sbjct: 347 ALAPSFAGLEMDTTEENLQARIRGTLLMALSNKSGKLVLTTGNKSEMTTGYCTLYGDMAG 406 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT VF+L WRN+ ++++IP I+ + PSAELRP Q DQ+SLP Sbjct: 407 GFAVLKDVAKTLVFELCRWRNT---------VSDIIPERIITRPPSAELRPDQKDQDSLP 457 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD I+ R VE+ +S + + + V V LL +EYKRRQAPVG ++T + F Sbjct: 458 PYEVLDAIMARYVEDNQSAADIIAAGFAEADVNRVVRLLKINEYKRRQAPVGPRVTQRGF 517 Query: 544 GRDRLYPISNKFR 556 G+D YPI+NKF Sbjct: 518 GKDWRYPITNKFS 530 >gi|15606275|ref|NP_213654.1| NH(3)-dependent NAD+ synthetase [Aquifex aeolicus VF5] gi|6093465|sp|O67091|NADE_AQUAE RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|2983464|gb|AAC07044.1| NH(3)-dependent NAD+ synthetase [Aquifex aeolicus VF5] Length = 567 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 216/575 (37%), Positives = 320/575 (55%), Gaps = 35/575 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L + +AQLN VGD+ GN K + +E + +I F EL +SGYPPEDL+ + F++ Sbjct: 2 LNLTLAQLNFTVGDVEGNKEKILKVIDE-YSEKSHIIAFPELSLSGYPPEDLLLQPHFLK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A D + T + + VG P + + + N++ ++ G ++ + K LPNYS F Sbjct: 61 ECEKAFDQIIHHTRNYDVIVAVGLPYYEFD-LYNALAVIHRGEVLGIYKKHFLPNYSVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G I ++ ICEDIW + + GAE + ++NASPY+ NK Sbjct: 120 EYRYFRKGEEPLMIEVNGHKVSFSICEDIWYPDGVERQTALSGAELIVNVNASPYHVNKY 179 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + + + + YVN VGGQDEL+FDG S +L + K F E Sbjct: 180 SFKESFLKSRAEDNLCFVAYVNLVGGQDELVFDGRSIVISPFGKLVARAKAFEEDILTVT 239 Query: 245 WHY---------DQQLSQWNYMSDDSASTMYIPLQEEEAD--------------YNACVL 281 D + + +Y + + L ++E Y A L Sbjct: 240 LDLGEAKRKRLLDLRWREGSYGREKVNVKRSVSLPDKEFFRGRIEENPKEEEEIYAALKL 299 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 SLRDYV+KN F KV++GLSGGIDS+ A +AVDALG+ENV+ + +P +++S +S EDA A Sbjct: 300 SLRDYVRKNGFEKVVLGLSGGIDSSFVACLAVDALGRENVKGVYMPSQFSSKESYEDAKA 359 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A+ LG ++ V+PI ++ +F+ + + E + ENIQ+RIR NIL SN + + Sbjct: 360 LAQNLGIEFHVIPIKEIYRAYFNEFEKEICEITFDVADENIQARIRANILFYFSNKFRYL 419 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +L+TSNKSE +VGY T+YGDM+GGF P+KD+YKT V++LA +RNS IP Sbjct: 420 VLSTSNKSETAVGYTTIYGDMAGGFAPIKDVYKTWVYKLARYRNSISPD---------IP 470 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 + +K PSAELRP+QTDQ+ LPPY ILD I+ +E S + + V + Sbjct: 471 ERVFKKPPSAELRPNQTDQDVLPPYEILDQILMLYIEENLSPEEIIRKGLPRDAVYKTIN 530 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ +EYKR+QAP+G KIT+++FG+D P++NKF Sbjct: 531 MIRKNEYKRKQAPIGPKITSRAFGKDWRMPVTNKF 565 >gi|268593219|ref|ZP_06127440.1| NAD(+) synthase [Providencia rettgeri DSM 1131] gi|291311267|gb|EFE51720.1| NAD(+) synthase [Providencia rettgeri DSM 1131] Length = 540 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 225/556 (40%), Positives = 335/556 (60%), Gaps = 23/556 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KL I++AQLN +VGDI GN + + E D+++F+EL ++GYPPEDL+F+ Sbjct: 1 MSRKLNISLAQLNWLVGDIEGNCDRMLQVVSEQAPN-TDIVMFSELSLTGYPPEDLIFRA 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F C +D L+ + + I+VG P + + + N++ G + A K LPNY Sbjct: 60 DFEDRCLVQLDRLQKASQE--TAIIVGHPWYEGDDIYNALSFFYQGKLHARYFKQELPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F + + F+ +LG+LICEDIW + +K GAE L ++NASPY Sbjct: 118 GVFDEPRYFTADEKTCVVEFKGYQLGLLICEDIWYD-EPVDAVKGAGAEILLTINASPYD 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK R +++ H+PI+Y+NQVGGQDEL+FDG S + + F+++ F EQ Sbjct: 177 INKEHIRTDLLVDHCKRTHMPIVYLNQVGGQDELVFDGGSKIIANKGKQTFKLEEFKEQV 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ +S+ + I Y A V+S RDY+ KN F+ I+GLS Sbjct: 237 ITVQFDELALVSEGSVF---------IENDPVAQVYQALVMSTRDYINKNGFNGAILGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIAVDA+GKE+VQ +M+P++YTS S+ DA A LG ++D++ I + + Sbjct: 288 GGIDSGLTVAIAVDAIGKEHVQAVMMPFRYTSEMSIHDAKEQADLLGVEFDIVSIEPMFD 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 348 AFMAQLTPMFEGTAVDTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+LA +RN+ ++ IP ++++ PSAEL P Q DQ Sbjct: 408 DMAGGFDVLKDVPKTLVFELAKYRNT---------ISPAIPQRVIDRPPSAELAPGQLDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD +++ VE + S + + ++ + VR V L+ +EYKRRQAPVG +IT Sbjct: 459 DSLPPYDVLDALLEGYVEKDLSVNDLIKLGFDKDVVRKVVRLVDINEYKRRQAPVGPRIT 518 Query: 540 AKSFGRDRLYPISNKF 555 ++FG+DR YPI++ F Sbjct: 519 MRNFGKDRRYPITSGF 534 >gi|307151612|ref|YP_003886996.1| NAD+ synthetase [Cyanothece sp. PCC 7822] gi|306981840|gb|ADN13721.1| NAD+ synthetase [Cyanothece sp. PCC 7822] Length = 561 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 219/576 (38%), Positives = 320/576 (55%), Gaps = 42/576 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP VGD+ N A +A QG+ L+L EL + GYPP+DL+ SF+ Sbjct: 1 MKIAIAQLNPTVGDLWSNANNILEAAHQAASQGVRLLLTPELSLCGYPPKDLLLNPSFVH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPR-------QDQEGVLNSVVILDAGNIIAVRDKINL 117 + S ++ L ++VG + ++ + NS+ +LD G + + K L Sbjct: 61 SLSVELENLAEKIPPQ-LAVLVGTVEANTDADSRGEKPLYNSIALLDEGKVKQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVF-------RDIRLGILICEDIWKNS----------NIC 160 P Y F E R F G ++ +++G+ ICED+W + N Sbjct: 120 PTYDVFDEDRYFEPGRQSNAFTIFPTPESENFVKVGVTICEDLWNDKDFWGKQTYEVNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L + +F+ +L+ASPY K K R ++T + H+PI+YVNQVGG D+LIFDG S Sbjct: 180 EDLVQLEVDFVVNLSASPYSVKKQKLRESMLTYSAAKYHVPILYVNQVGGNDDLIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F + Q ++ + K + E+ +A EE + A V Sbjct: 240 FAVNRQGEVFCRAKALETDVKILEF-------CPEKQDLLAAFIQPFIEIEEAEIFAALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DY +K F KV++GLSGGIDS+L AAIA +A+GK+NV +++P Y+S S+ DA Sbjct: 293 LGLKDYARKCGFTKVVLGLSGGIDSSLVAAIAAEAMGKDNVLGVLMPSPYSSDHSITDAE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A AK LG K LPI + + ++ P GI ENIQSRIRGN+LMA++N Sbjct: 353 ALAKNLGIKSYQLPIEPAMKVYDQMLEPLFTGTPFGIAEENIQSRIRGNLLMAIANKFGY 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+V+ + W N E+I Sbjct: 413 LLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVYDICQWLNREQ---------EII 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVE 519 P ++L K PSAEL+P Q DQ+SLPPY ILDDI+ R++ +S D Y+ E V+ V Sbjct: 464 PHNVLIKPPSAELKPDQKDQDSLPPYEILDDILYRMINKHQSIPQIVDAGYDAEVVKKVM 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QAP G KIT ++FG PI++++ Sbjct: 524 KLVMRAEFKRKQAPPGLKITDRAFGTGWRMPIASRW 559 >gi|304316376|ref|YP_003851521.1| NAD+ synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777878|gb|ADL68437.1| NAD+ synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 545 Score = 598 bits (1541), Expect = e-168, Method: Composition-based stats. Identities = 226/566 (39%), Positives = 322/566 (56%), Gaps = 36/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLNP VGDI N K +EA + MDLI+F EL I GYPP+DL++ F++ Sbjct: 1 MKIALAQLNPTVGDIKNNCEKIIMYIKEAKKANMDLIVFPELSIIGYPPKDLLYNPDFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNYS 121 + SA++ L G++VG +D+E + NS ++L G II DK LPNY Sbjct: 61 SSYSALNELI-LPETNDIGVIVGIATKDKEKDYMLHNSALLLYNGKIIGQADKTLLPNYD 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ----------GAEFL 171 F E+R F S F+ +RL + ICEDIW + + + + + Sbjct: 120 VFDEQRYFEPAKSRTCFDFKGMRLAVNICEDIWNDKDFWERPRYDIDVLEEQYKLNPDIF 179 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +++ASPY K + R ++V LP+IYVNQVGG DELIFDG SF + Sbjct: 180 INISASPYNLGKQELRTKMVKQISKKYKLPLIYVNQVGGNDELIFDGNSFAINSNGDRVV 239 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 ++ FSE + + D + ++ ++A +L LRDY +K Sbjct: 240 NLRSFSEDIAFVDTE-----------NLDELKPLQEIKEDISWVHDALILGLRDYFRKTG 288 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F K ++GLSGGIDSA+ A+AV ALG+ENV + +P +Y+S S +DA A+ LG +Y Sbjct: 289 FKKAVVGLSGGIDSAVTCALAVKALGRENVLGVSMPSRYSSEGSKDDARDLAQNLGIQYR 348 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V+PI D+ + S+ ++ + EN+Q+RIRGN LM +SN M+LTT NKSEI Sbjct: 349 VIPIEDVFKSYISIFNKD-GNVLGDLAEENLQARIRGNYLMFISNREGYMVLTTGNKSEI 407 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDMSGG + D+ KT V++LA + N I +IP S +EK+PSA Sbjct: 408 AVGYCTLYGDMSGGLAVISDVPKTMVYELAKYINRDKI---------IIPLSTIEKAPSA 458 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q D +SLPPY ILDDI+K +E+++S Y+ + VR V + +EYKR+ Sbjct: 459 ELRPNQKDTDSLPPYEILDDILKSYIEDDKSISEIIADGYDKDLVRDVIRKVNNAEYKRK 518 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QA G K+T K+FG R PI+ +FR Sbjct: 519 QAAPGLKVTTKAFGVGRRMPIAQRFR 544 >gi|166366233|ref|YP_001658506.1| NAD synthetase [Microcystis aeruginosa NIES-843] gi|166088606|dbj|BAG03314.1| glutamine-dependent NAD(+) synthetase [Microcystis aeruginosa NIES-843] Length = 552 Score = 598 bits (1541), Expect = e-168, Method: Composition-based stats. Identities = 223/571 (39%), Positives = 329/571 (57%), Gaps = 40/571 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQLNP+VGDI GN + A + A QG +L+L EL + GYPP DL+ F++ Sbjct: 1 MRIAIAQLNPIVGDIEGNAQRILEAAQTAFNQGAELLLTPELSLCGYPPRDLLLNLGFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 S + L + ++VGF ++ ++ + NS+ +L + I + K L Sbjct: 61 KMSRQLQLLSQQLPEK-LAVLVGFVEKNPSATVRGEKPLFNSIALLKSQEIKQIFTKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS----------NICKHLKK 165 P Y F E R F SG + ++++G+ ICED+W + N L Sbjct: 120 PTYDVFDEDRYFASGKESQYFQLTENNVKIGVTICEDVWNDEQFWGQRQYAVNPIADLAN 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 G + + +L+ASPY K K R +++ + +LPI+YVNQVGG D+LIFDG S F+ Sbjct: 180 LGVDLIVNLSASPYSVGKQKLRESLLSHSATRYNLPIVYVNQVGGNDDLIFDGDSVAFNR 239 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 Q ++ ++ + F+ + E++ D A +P+ E+E Y A VL +RD Sbjct: 240 QGEVIYRAQAFTSSLELIEFNQDLL----------PAVIHPLPVDEDEEIYRALVLGVRD 289 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 YVQK F +VI GLSGGIDS+L AAIA DALGKENV +M+P Y+S S+ DA A Sbjct: 290 YVQKCGFKRVIFGLSGGIDSSLVAAIASDALGKENVLAVMMPSPYSSDHSISDAVALVNN 349 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG K + L I +++ + L+ GI EN+QSRIRGN+LMALSN +LL+T Sbjct: 350 LGIKSEKLAIQEIMTAYDQLLEPVFAGTDFGIAEENLQSRIRGNLLMALSNKFGHLLLST 409 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY TLYGDM+GG + D+ KT+V+ L W N HG E+IP +++ Sbjct: 410 GNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCRWLNRHG---------EIIPLNVI 460 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYG 524 K+PSAEL+P+Q DQ+SLPPY ILD I+ +++ +S + E V+ V L+ Sbjct: 461 NKAPSAELKPNQKDQDSLPPYEILDAILALLIDRHQSAEQIIAAGFEPEIVQKVIKLVKN 520 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +E+KR+QAP G KI+ ++FG PI++++ Sbjct: 521 AEFKRKQAPPGLKISDRAFGTGWRMPIASRW 551 >gi|302036712|ref|YP_003797034.1| NAD(+) synthase (glutamine-hydrolyzing) [Candidatus Nitrospira defluvii] gi|300604776|emb|CBK41108.1| NAD(+) synthase (glutamine-hydrolyzing) [Candidatus Nitrospira defluvii] Length = 589 Score = 597 bits (1540), Expect = e-168, Method: Composition-based stats. Identities = 223/596 (37%), Positives = 316/596 (53%), Gaps = 48/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L+IA+AQ+NP VGDIAGN + +EA R DL+ F EL ++GYPPEDL+FK Sbjct: 1 MRPLRIAMAQINPTVGDIAGNTRLIQTWIKEARRAKADLVAFPELAVTGYPPEDLLFKPR 60 Query: 62 FIQACSSAIDTLKSDTHDGGA--------GIVVG------FPRQDQEGVLNSVVILDAGN 107 FI+ A+ + ++ V FP + + N +L Sbjct: 61 FIEDTQRALKAVAAEARGLVVVVGYVGQGATAVSASEAPSFPLAGRHELYNEAAVLSDRR 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 I+A K +LPNY F E R F G +V +G+ ICEDIW + + G Sbjct: 121 ILATYRKRHLPNYGVFDESRYFHPGSRLPLLVLNGATIGVNICEDIWFSDGPTRLQASAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 AE + ++NASP++ K + R +++ + + + Y N VGGQDEL+FDG S D Sbjct: 181 AEVIVNINASPFHVGKGRMREQVLATRARENRVIVTYTNTVGGQDELVFDGCSMIVDQAG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLS--------------------------QWNYMSDDS 261 ++ + K F + + + Sbjct: 241 EIVGRGKAFEQDLIVADLDVAAVGRVRLAQGRRKPLPPRVAALIDRVDVRLPARKSQSVV 300 Query: 262 ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENV 321 + PL + Y A VL ++DYV+KN F +V+IGLSGG+DSA+ A IAVDALG ENV Sbjct: 301 VPDLEPPLGRLDEAYRALVLGVQDYVRKNGFKRVVIGLSGGVDSAITAVIAVDALGAENV 360 Query: 322 QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAEN 381 + +P YTS S ED A A+ L + D L I + + + + EN Sbjct: 361 LGVFMPSPYTSRASREDVADMARRLHIQVDTLSITATFKSYLRALGRSFKGRRPDTTEEN 420 Query: 382 IQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLA 441 +Q+RIRGN+LMA SN ++LTT NKSE+SVGY TLYGDM+GGF +KD+ KT V++L+ Sbjct: 421 LQARIRGNLLMAYSNKFGHLVLTTGNKSEMSVGYATLYGDMAGGFAVIKDVPKTMVYELS 480 Query: 442 SWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 RN G VIP +LE++P+AELRP Q D++SLPPY ILD I+K VE + Sbjct: 481 HMRNLVGP-------VPVIPKRVLERAPTAELRPDQKDEDSLPPYAILDPILKAYVEEDR 533 Query: 502 SFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + + ++ ETV V L+ SEYKRRQAP+G KIT ++FG+DR PI+N +R Sbjct: 534 ALEDITAMGFDRETVARVIALVDRSEYKRRQAPLGIKITHRAFGKDRRMPITNGYR 589 >gi|254429711|ref|ZP_05043418.1| NAD synthase family [Alcanivorax sp. DG881] gi|196195880|gb|EDX90839.1| NAD synthase family [Alcanivorax sp. DG881] Length = 537 Score = 597 bits (1540), Expect = e-168, Method: Composition-based stats. Identities = 229/552 (41%), Positives = 311/552 (56%), Gaps = 22/552 (3%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFIQACS 67 +AQ N +VGDI GN + A +EA R G DL+LF EL ++GYPPEDL+ + S Sbjct: 1 MAQQNALVGDIEGNAQRVIAAADEARRLLGADLVLFPELMLTGYPPEDLLLRPSLNSRVD 60 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGN--IIAVRDKINLPNYSEFHE 125 +A+ + + +V+G+P N+ ++ G K +LPNY F E Sbjct: 61 AALADIGAAI---SVPVVLGYPAVRNGHRRNAAGVVFPGESGPRHEYFKQHLPNYRVFDE 117 Query: 126 KRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 KR F G LGI ICEDIW + L++ GA+ + +LNASPY NK Sbjct: 118 KRYFQPGTDICTFDIEGWTLGITICEDIW-HDGPAAQLQQAGADLVLNLNASPYRANKAD 176 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW 245 +R V + LP++Y N VGGQDEL+FDGASF D Q Q F+E + Sbjct: 177 ERFAQVQARSRETGLPVLYCNLVGGQDELVFDGASFVCDSQGNRCVQAASFTEALVPVDL 236 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + + +P EE Y A VL+ RDYV KN F ++GLSGGIDS Sbjct: 237 ------QCQGGHCEPRGEELPLPGPEEGM-YQALVLATRDYVNKNGFKGALLGLSGGIDS 289 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 AL A+AVDALG E V+ +M+P++YTS SLEDA A+ L Y VLPI N F + Sbjct: 290 ALTLAVAVDALGPERVEAVMMPFQYTSAMSLEDAEKQARTLRVHYRVLPIEAAFNGFMDI 349 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 +S+ EN+Q+R RG +LMALSN + +++LTT NKSE++VGY TLYGDM+GG Sbjct: 350 LSESFSGTARDTTEENLQARCRGVLLMALSNKNGSVVLTTGNKSEMAVGYATLYGDMAGG 409 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 F+ LKD++KT VF L WRN E+IP ++ + PSAEL P Q D +SLP Sbjct: 410 FSVLKDVFKTSVFNLCRWRNQQAG-------AEIIPDRVITRPPSAELAPDQVDSDSLPD 462 Query: 486 YPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 Y LD I++R VE + S + ++ ETV V L +EYKRRQA VG +++ ++FG Sbjct: 463 YDELDAILERYVEQDMSAEAVIRDGFDRETVYRVVKLTDRNEYKRRQAAVGPRVSRRAFG 522 Query: 545 RDRLYPISNKFR 556 +DR YPI+N +R Sbjct: 523 KDRRYPITNGWR 534 >gi|239907746|ref|YP_002954487.1| probable glutamine-dependent NAD(+) synthetase [Desulfovibrio magneticus RS-1] gi|239797612|dbj|BAH76601.1| probable glutamine-dependent NAD(+) synthetase [Desulfovibrio magneticus RS-1] Length = 583 Score = 597 bits (1540), Expect = e-168, Method: Composition-based stats. Identities = 206/583 (35%), Positives = 300/583 (51%), Gaps = 39/583 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ QLNP VGD+A N A A G D+++F E+ ++GYPPEDL+ K Sbjct: 1 MPALRLALCQLNPTVGDVAANAADVVSRLTAARDGGADIVVFPEMVVAGYPPEDLLLKPD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC +A + ++ G + G P + + ++N+ ++ G + + K LPNY Sbjct: 61 FVAACMAAARDIARESQ--GLTAIFGCPWFEGD-LVNAAIVAHDGAVAGIVAKRFLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F +G + G+ +CEDIW K G A L +++ASPY+ Sbjct: 118 VFDENRYFAAGQGTTVFDRGGLIFGVSVCEDIWYPDGPPTEQAKHGGARLLINISASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ + + + Y N VGGQDEL+FDG S F L + + F E Sbjct: 178 MGKGTSRERMLATRAADNGAFVAYANLVGGQDELVFDGHSLVFAPDGALLARGRQFDEDM 237 Query: 241 FMTEWHYDQQLSQ------WNYMSDDSAST---------------------MYIPLQEEE 273 + D Q A M PL+ Sbjct: 238 VWCDLDVDLPTRQRLLDPRCRKWEPAPACRPVRTALSPLAAPARPALAQATMAAPLEPVA 297 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V + RDYV+K+ F V +GLSGGIDS+L A IA DALG ENV + +P +++S Sbjct: 298 EVYRALVTATRDYVRKSGFCGVALGLSGGIDSSLTAIIAADALGPENVLGVAMPTRFSSD 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 SLEDA A A+ LG + + I + F + + P + EN+Q R+RG +LMA Sbjct: 358 DSLEDAQALAERLGIELKTVVIEPIFQAFLDALGPIFGDRPFDVTEENLQPRVRGTLLMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN ++LTT NKSE+ VGY TLYGD +GG+ +KD+ KT V+ L+ WRN Sbjct: 418 LSNKFGRLVLTTGNKSEVGVGYSTLYGDTAGGYAVIKDVPKTLVYALSRWRNEQAG---- 473 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYND 512 +VIP +L K P+AELRP+Q D +SLP Y +LD ++ VE S ++ + Sbjct: 474 ---LDVIPERVLVKPPTAELRPNQKDSDSLPEYDVLDPTLQAYVELGLSPAAMLERGLDP 530 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V V L+ +EYKRRQ+P G KIT+++FG+D PI N++ Sbjct: 531 AVVDRVTRLVDRNEYKRRQSPPGPKITSRAFGKDWRLPIVNRY 573 >gi|120602568|ref|YP_966968.1| NAD+ synthetase [Desulfovibrio vulgaris DP4] gi|120562797|gb|ABM28541.1| NH(3)-dependent NAD(+) synthetase [Desulfovibrio vulgaris DP4] Length = 559 Score = 597 bits (1539), Expect = e-168, Method: Composition-based stats. Identities = 214/567 (37%), Positives = 312/567 (55%), Gaps = 29/567 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q++ VVGDI GN A+ A EA G L + EL + GYPP DL+ + F+ Sbjct: 1 MKVALLQIDTVVGDIVGNAARIADAVREAASLGARLCVTPELALCGYPPRDLLLQDDFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIV---VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 AC A++ L D +V V P + N V+L G + K+ LPNY Sbjct: 61 ACRKALEALAQQLRDLPPVLVGAPVPNPSPVGNPIHNCAVLLREGKVTVATRKVLLPNYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-----------SNICKHLKKQGAEF 170 F E+R F SG + R G+ ICED+W + ++ L GA+ Sbjct: 121 VFDERRYFESGVGCGVVTIDGWRFGVTICEDVWNDKTFWQEHRHYENDPVADLMAGGADA 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +L+ASP+ K R +++ + ++Y NQVGG D+L+F G S FD L Sbjct: 181 ILNLSASPFTLGKQAVRERMLSRVAFRYRVSVLYANQVGGNDDLVFAGKSIAFDATGTLI 240 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + + F+E M + + + + P +EE + A VL RDY +K Sbjct: 241 ARGRSFAEDIVMVDV------------AQATGTITAEPTSDEEQVWKALVLGTRDYARKC 288 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F ++GLSGGIDSAL AA+A +ALG + V +++P ++S S+ DA A A +LG Sbjct: 289 GFEGAVLGLSGGIDSALVAAVAAEALGPDKVLGVLMPSPHSSEGSVTDALALASSLGIAT 348 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +PI DL++ F + ++Q + + ENIQSRIRGN+LMALSN + +LLTT NKSE Sbjct: 349 CTIPIGDLMHGFEAALAQAFAGREADVTEENIQSRIRGNLLMALSNKQRRLLLTTGNKSE 408 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL--GPLTEVIPPSILEKS 468 ++VGY T+YGDM+GG + DL KT V+++A W N + G E IP +IL K Sbjct: 409 LAVGYCTIYGDMAGGLAVIADLPKTLVYRVAHWLNERDTSHGHEGCEARETIPSAILTKE 468 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEY 527 PSAELRP Q D +SLPPY +LD I++R+VE S + + Y+ ETVR V L+ +E+ Sbjct: 469 PSAELRPGQRDSDSLPPYDVLDGILERLVELRRSAADIVAEGYDVETVRKVLRLVCNAEF 528 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNK 554 KRRQAP G K+T ++FG P++ + Sbjct: 529 KRRQAPPGLKVTDRAFGTGWRMPVAAR 555 >gi|110833335|ref|YP_692194.1| NAD+ synthase [Alcanivorax borkumensis SK2] gi|110646446|emb|CAL15922.1| NAD+ synthase (glutamine-hydrolysing) [Alcanivorax borkumensis SK2] Length = 541 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 226/556 (40%), Positives = 311/556 (55%), Gaps = 22/556 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 ++I +AQ N +VGDI GN + A +EA R G DL+LF EL ++GYPPEDL+ + S Sbjct: 1 MRIIMAQQNALVGDIEGNAQRVIAASDEARRLLGADLVLFPELMLTGYPPEDLLLRPSLN 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNI--IAVRDKINLPNYS 121 +A+ + + +V+G+P N+ ++ G K +LPNY Sbjct: 61 SRVDAALADIGAAI---SVPVVLGYPAVRNGHRRNAAGVMFPGETGPRHEYFKQHLPNYR 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F G LGI ICEDIW ++ L+K G + + +LNASPY Sbjct: 118 VFDEKRYFQPGKDACTFDIDGWTLGITICEDIW-HAGPAAQLQKAGTDLILNLNASPYRI 176 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 NK +R + V + LP++Y N VGGQDEL+FDGASF D Q Q F+E Sbjct: 177 NKADERFDQVQARCRETGLPVLYCNLVGGQDELVFDGASFVCDSQGNRCVQAASFTEALV 236 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + + + + Y A VL+ RDYV KN F ++GLSG Sbjct: 237 PVDVQCQGGHCEPR-------GEVLPLPGPQAGMYQALVLATRDYVNKNGFKGALLGLSG 289 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL A+AVDALG E V+ +M+P++YTS SLEDA A+ L Y VLPI N Sbjct: 290 GIDSALTLAVAVDALGPERVEAVMMPFQYTSAMSLEDAEKQARTLRVHYRVLPIEAAFNG 349 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F ++ + EN+Q+R RG +LMALSN + +++LTT NKSE++VGY TLYGD Sbjct: 350 FMDILREPFAGTSRDTTEENLQARCRGVLLMALSNKNGSVVLTTGNKSEMAVGYATLYGD 409 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF+ LKD++KT VF L WRN E+IP ++ + PSAEL P Q D + Sbjct: 410 MAGGFSVLKDVFKTSVFNLCRWRNQQAG-------AEIIPDRVITRPPSAELAPDQVDSD 462 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLP Y LD I++R VE + S + ++ ETV V L +EYKRRQA VG +++ Sbjct: 463 SLPDYDELDAILERYVEQDMSAEAVIRDGFDRETVYRVVKLTDRNEYKRRQAAVGPRVSR 522 Query: 541 KSFGRDRLYPISNKFR 556 ++FG+DR YPI+N +R Sbjct: 523 RAFGKDRRYPITNGWR 538 >gi|218245153|ref|YP_002370524.1| NAD synthetase [Cyanothece sp. PCC 8801] gi|218165631|gb|ACK64368.1| NAD+ synthetase [Cyanothece sp. PCC 8801] Length = 561 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 217/576 (37%), Positives = 327/576 (56%), Gaps = 41/576 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GD+A N K A + A Q L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQLNPIIGDLANNAQKINDAAQFAASQNARLLLTPELSLCGYPPRDLLLNPSFVK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-------RQDQEGVLNSVVILDAGNIIAVRDKINL 117 + S ++ L ++VG + ++ + NSV L+ G I + K L Sbjct: 61 SLSLELEQLSKKIPPQ-LAVLVGTVTANTDAYIKGEKPLFNSVAWLENGQIKQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI------RLGILICEDIWKN----------SNICK 161 PNY F E R F G ++ D ++G+ ICED+W + N Sbjct: 120 PNYDVFDEARYFEPGRQSNYFQLTDFESSEILKIGVTICEDLWNDQEFWGQKYYEHNPLA 179 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L G + + +L+ASPY K K R +++ +PI+Y NQ+GG D+LIFDG SF Sbjct: 180 DLIDFGVDLIVNLSASPYTVGKQKIREKMIKYSSQRYQIPIVYTNQIGGNDDLIFDGNSF 239 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL 281 + Q ++A ++K F E + ++ + + ++D + EEE + A VL Sbjct: 240 VVNRQGKIALRLKGFEENIQVVDFDLKAKDFCSSSLNDHT-------TIEEEEIWLALVL 292 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 L+DY +K F K ++GLSGGIDS+L AAIA +ALGK+NV +++P ++S S+ DA A Sbjct: 293 GLKDYAKKCGFSKAVLGLSGGIDSSLVAAIATEALGKDNVLGLLMPSPFSSEHSITDAEA 352 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 K LG PI D++N + +L+ GI EN+QSRIRGN+LMA++N + Sbjct: 353 LVKNLGINSYKFPIEDVMNSYDTLLHPLFLGTEFGIAEENLQSRIRGNLLMAIANKFGYL 412 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H TEVIP Sbjct: 413 LLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFSLCQWLNRH---------TEVIP 463 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 ++L K PSAEL+P+Q DQ+SLPPY ILD+I+ R++ +S +D ++ + + Sbjct: 464 HNVLIKPPSAELKPNQVDQDSLPPYDILDEILDRLIHRHQSVSQIHDAGFDLAVINKILK 523 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KR+QAP G K+T ++FG PI+++++ Sbjct: 524 LVIRAEFKRKQAPPGLKVTDRAFGTGWRMPIASRWK 559 >gi|163783722|ref|ZP_02178709.1| NH(3)-dependent NAD+ synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159881047|gb|EDP74564.1| NH(3)-dependent NAD+ synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 567 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 224/577 (38%), Positives = 318/577 (55%), Gaps = 35/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L + +AQ+NPVVGDI GN+ K R + LI+F EL +SGY PEDL+ + F++ Sbjct: 2 LNVTLAQVNPVVGDIEGNVEKIRESVARC-EDTSHLIVFPELVVSGYFPEDLLLRIDFVR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A++ L D + +VVG P + NS+ +L G ++ V K LPNYS F Sbjct: 61 KCMEAVEELAKSLKDAKSLVVVGAP-FYGGDLYNSLYLLYGGEVVGVYHKGRLPNYSVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + I+LG ICEDIW ++ + GAE + ++NASPY+ K Sbjct: 120 EKRYFREGEDPLLVELNGIKLGFSICEDIWYPDHLERLSVLSGAEVIVNINASPYHIGKH 179 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + R V + ++Y N VGG DEL+FDG S D ++ + K F E Sbjct: 180 EFREGFVRARAEDNICFVLYANLVGGHDELVFDGRSMVVDPLGRVVGRAKSFEEDLLTLS 239 Query: 245 WHYDQQ--------------LSQWNYMSDDSASTMYIPLQEEE---------ADYNACVL 281 D+ + + S P E Y A VL Sbjct: 240 IDVDKVRRRRLLDLRWRNASREIDPFPVEASIELPDKPYVEPRLEESPSEEEEVYRAVVL 299 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 DYV KN F KV+IGLSGG+DS+L A IA DALG + V + +P +++S +S EDA Sbjct: 300 GTHDYVVKNGFSKVVIGLSGGMDSSLTACIATDALGADKVLGVFMPSRFSSKESFEDAKT 359 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A LG ++ +PI ++ + + L E ENIQ+RIR NIL +SN + Sbjct: 360 LADNLGIEFHTVPIDEVYVAYHDELLPVLGEIEFDTADENIQARIRANILFYISNKLGHL 419 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 +L+TSNKSE + GY T+YGDMSGGF PLKDLYKT +++LA +RNS L+ VIP Sbjct: 420 VLSTSNKSESATGYTTIYGDMSGGFAPLKDLYKTTIYKLARYRNS---------LSPVIP 470 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEH 520 + +K PSAELRP+QTDQ++LPPY +LD+I+K +E+ S + + Y+ TV V Sbjct: 471 ERVFQKPPSAELRPNQTDQDTLPPYEVLDEILKMYLEDNVSPEDIVKKGYDRGTVFKVVK 530 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ +EYKR+QAPVG K+T+++FG+D PI+N++ Sbjct: 531 MVRRAEYKRKQAPVGVKVTSRAFGKDWRMPITNRYER 567 >gi|224826930|ref|ZP_03700029.1| NAD+ synthetase [Lutiella nitroferrum 2002] gi|224600917|gb|EEG07101.1| NAD+ synthetase [Lutiella nitroferrum 2002] Length = 530 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 223/553 (40%), Positives = 318/553 (57%), Gaps = 24/553 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ NPVVGDIAGN K +A QG D+++ EL ++GY PEDL+ + F + Sbjct: 1 MRIALAQFNPVVGDIAGNTRKILDLARQAMAQGADVLVTPELALTGYSPEDLLLRDHFYR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 CS A+D L G +VVG P + N+ ++ GN + K+ LPN F Sbjct: 61 ECSKALDELLEL---DGITLVVGHPVKLGNERFNAATVMRDGNRLGQYHKMLLPNNEVFD 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G + + +G+LICED+W + + GA+ + LNASP++ NK+ Sbjct: 118 ECRYFTPGGAPLVFPQDGVNVGVLICEDVW-SLDPAAEAADAGADVVVVLNASPFHRNKI 176 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + RHE V ++ LP YVN GGQDEL+FDGASF + ++ Q + ++ + Sbjct: 177 ETRHETVRYRVEETGLPFAYVNLTGGQDELVFDGASFALNKAGEVVAQAAAYDDELLIV- 235 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q A +P E+ Y V+ +RDY+ KN F V++GLSGGID Sbjct: 236 --------QMADGDLQPAGKATLPC-PLESVYRTLVIGVRDYIGKNGFPGVLLGLSGGID 286 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIA DALG + V +M+P +YT+ S++D+ + LG KY+ + I + F + Sbjct: 287 SALTLAIAYDALGADKVHAVMMPSRYTADISVDDSRDMVERLGVKYEEIAIWPMYESFMA 346 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + EN+Q+RIRG +LMALSN + ++LTT NKSE++ GY TLYGDM+G Sbjct: 347 ALAPSFEGLAEDTTEENLQARIRGTLLMALSNKTGKLVLTTGNKSEMTTGYCTLYGDMAG 406 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V+QL WRN+ +E+IP I+ + PSAELRP Q DQ+SLP Sbjct: 407 GFAVLKDVAKTLVYQLCHWRNAQ---------SEIIPLRIITRPPSAELRPDQKDQDSLP 457 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD I+ R VE S + + + VR V LL +EYKRRQAPVG ++T + F Sbjct: 458 PYDVLDAIMARYVEENLSAAEIIAEGFAEADVRRVVRLLKINEYKRRQAPVGPRVTHRGF 517 Query: 544 GRDRLYPISNKFR 556 G+D YPI+N+F Sbjct: 518 GKDWRYPITNRFS 530 >gi|91776238|ref|YP_545994.1| NH(3)-dependent NAD(+) synthetase [Methylobacillus flagellatus KT] gi|91710225|gb|ABE50153.1| NH(3)-dependent NAD(+) synthetase [Methylobacillus flagellatus KT] Length = 535 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 234/552 (42%), Positives = 317/552 (57%), Gaps = 22/552 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+N GD+ GN AK A G L+L EL +SGY PEDL+ + F Sbjct: 1 MKIAIAQINATAGDLTGNAAKIVEQARRAEAAGATLLLCPELALSGYSPEDLLLRDDFYH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L + +VVG PR+ N+ +L+AG I K LPN S F Sbjct: 61 ACERALYALAQELP-ATLTVVVGHPRKYLGNRYNAASVLEAGRICHTYHKALLPNDSVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G I +LGI+IC D+W + + GA L LNASPY+ K Sbjct: 120 EVRYFSEGSEALVINHLGCKLGIVICADVW-APEPARRARDAGATVLLVLNASPYHIGKQ 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R+ +V +I LP++Y N VGGQDEL+FDGASF + + L Q+ F E + Sbjct: 179 QERYAVVRDRIKETGLPVVYANLVGGQDELVFDGASFVMNDEGALTQQLPSFDEALGIVS 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + + + A +P E Y A L RDYV KNNF V++GLSGGID Sbjct: 239 F---------SDGAPEPAEIHPLPGLEPAV-YQALSLGFRDYVLKNNFPGVLLGLSGGID 288 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG VQ +M+P +T+ SLEDA A A L +Y + I + F + Sbjct: 289 SALTLAIAVDALGAGKVQAVMMPSAFTASISLEDAQAMAAGLNVRYSEIAIGPVFESFCA 348 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ P EN+Q+RIRG +LMALSN +M++TT NKSE +VGY TLYGDM+G Sbjct: 349 ALAPEFAGRPFDTAEENLQARIRGTLLMALSNKFGSMVVTTGNKSETAVGYSTLYGDMAG 408 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V+QLA +RN+ +++VIP I+ + PSAELR QTDQ+SLP Sbjct: 409 GFALLKDVSKTLVYQLAKYRNT---------ISQVIPERIILRPPSAELRHGQTDQDSLP 459 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y +LD I++ VEN+ S+ Y ++ V V L+ +EYKRRQAP+G ++T + F Sbjct: 460 DYAVLDGIMEAYVENDYSWEEILALGYREQDVLRVTRLVDRNEYKRRQAPIGVRVTKRGF 519 Query: 544 GRDRLYPISNKF 555 G+DR YP++NKF Sbjct: 520 GKDRRYPLTNKF 531 >gi|46580021|ref|YP_010829.1| glutamine-dependent NAD+ synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|46449437|gb|AAS96088.1| glutamine-dependent NAD+ synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|311233980|gb|ADP86834.1| NAD+ synthetase [Desulfovibrio vulgaris RCH1] Length = 559 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 214/567 (37%), Positives = 312/567 (55%), Gaps = 29/567 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q++ VVGDI GN A+ A EA G L + EL + GYPP DL+ + F+ Sbjct: 1 MKVALLQIDTVVGDIVGNAARIADAVREAASLGARLCVTPELALCGYPPRDLLLQDDFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIV---VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 AC A++ L D +V V P + N V+L G + K+ LPNY Sbjct: 61 ACRKALEALAQQLRDLPPVLVGAPVPNPSPVGNPIHNCAVLLREGKVTVATRKVLLPNYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-----------SNICKHLKKQGAEF 170 F E+R F SG + R G+ ICED+W + ++ L GA+ Sbjct: 121 VFDERRYFESGVGCGVVTIDGWRFGVTICEDVWNDKTFWQEHRHYENDPVADLMAGGADA 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +L+ASP+ K R +++ + ++Y NQVGG D+L+F G S FD L Sbjct: 181 ILNLSASPFTLGKQAVRERMLSRVAFRYRVSVLYANQVGGNDDLVFAGKSIAFDATGTLI 240 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + + F+E M + + + + P +EE + A VL RDY +K Sbjct: 241 ARGRSFAEDIVMVDV------------AQATGTITAEPTSDEEQVWKALVLGTRDYARKC 288 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F ++GLSGGIDSAL AA+A +ALG + V +++P ++S S+ DA A A +LG Sbjct: 289 GFDGAVLGLSGGIDSALVAAVAAEALGPDKVLGVLMPSPHSSEGSVTDALALASSLGIAT 348 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +PI DL++ F + ++Q + + ENIQSRIRGN+LMALSN + +LLTT NKSE Sbjct: 349 CTIPIGDLMHGFEAALAQAFAGREADVTEENIQSRIRGNLLMALSNKQRRLLLTTGNKSE 408 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG--PLTEVIPPSILEKS 468 ++VGY T+YGDM+GG + DL KT V+++A W N + G E IP +IL K Sbjct: 409 LAVGYCTIYGDMAGGLAVIADLPKTLVYRVAHWLNERDTSHGHEGREARETIPSAILTKE 468 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEY 527 PSAELRP Q D +SLPPY +LD I++R+VE S + + Y+ ETVR V L+ +E+ Sbjct: 469 PSAELRPGQRDSDSLPPYDVLDGILERLVELRRSAADIVAEGYDVETVRKVLRLVCNAEF 528 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNK 554 KRRQAP G K+T ++FG P++ + Sbjct: 529 KRRQAPPGLKVTDRAFGTGWRMPVAAR 555 >gi|159029185|emb|CAO87545.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 552 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 223/571 (39%), Positives = 329/571 (57%), Gaps = 40/571 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQLNP+VGDI GN + A + A QG +L+L EL + GYPP DL+ F++ Sbjct: 1 MRIAIAQLNPIVGDIEGNAQRILEAAQTAFNQGAELLLTPELSLCGYPPRDLLLNLGFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 S + L + ++VGF ++ ++ + NS+ +L + I + K L Sbjct: 61 KMSQQLQLLSQQLPEK-LAVLVGFVEKNPSATVRGEKPLFNSIALLKSQEIKQIFTKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR--DIRLGILICEDIWKNS----------NICKHLKK 165 P Y F E R F SG + ++++G+ ICED+W + N L Sbjct: 120 PTYDVFDEDRYFASGKESQYFQLTENNVKIGVTICEDVWNDEQFWGQRQYAVNPIADLAN 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 G + + +L+ASPY K K R +++ + +LPI+YVNQVGG D+LIFDG S F+ Sbjct: 180 LGVDLIVNLSASPYSVGKQKLRESLLSHSATRYNLPIVYVNQVGGNDDLIFDGDSVAFNR 239 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 Q ++ ++ K F+ + E++ D A +P+ E+E Y A VL ++D Sbjct: 240 QGEVIYRAKAFTSSLELIEFNQDLL----------PAIIHPLPVDEDEEIYQALVLGVQD 289 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 YVQK F +VI GLSGGIDS+L AAIA DALGKENV +M+P Y+S S+ DA A Sbjct: 290 YVQKCGFKRVIFGLSGGIDSSLVAAIASDALGKENVLAVMMPSPYSSDHSISDAVALVNN 349 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG K + L I +++ + L+ GI EN+QSRIRGN+LMALSN +LL+T Sbjct: 350 LGIKSEKLAIKEIMTAYDQLLESLFAGTDFGIAEENLQSRIRGNLLMALSNKFGHLLLST 409 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY TLYGDM+GG + D+ KT+V+ L W N HG E+IP +++ Sbjct: 410 GNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCRWLNRHG---------EIIPLNVI 460 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYG 524 K+PSAEL+P+Q DQ+SLPPY ILD I+ +++ +S + E V+ V L+ Sbjct: 461 NKAPSAELKPNQKDQDSLPPYEILDAILALLIDRHQSAEQIIAAGFEPEIVQKVIKLVKN 520 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +E+KR+QAP G KI+ ++FG PI++++ Sbjct: 521 AEFKRKQAPPGLKISDRAFGTGWRMPIASRW 551 >gi|312795378|ref|YP_004028300.1| glutamine-dependent NAD(+) synthetase [Burkholderia rhizoxinica HKI 454] gi|312167153|emb|CBW74156.1| Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) [Burkholderia rhizoxinica HKI 454] Length = 559 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 223/572 (38%), Positives = 322/572 (56%), Gaps = 34/572 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+N VGD AGNIAK A + A+ G L++ EL +SGYPPEDL+ + +F Sbjct: 1 MKIALAQINVTVGDFAGNIAKIVAAAQTAHDAGASLMIAPELALSGYPPEDLLLRPAFYT 60 Query: 65 ACSSAIDTLKS-DTHDGGAGIVVGFPRQDQE-----------------GVLNSVVILDAG 106 A +A+ L + + G ++VG P + N+ +L G Sbjct: 61 ASHAALSELAAQLSRFAGLRVLVGHPYRSAPTGDVNPNRPLERGVPPVDTFNAASLLAEG 120 Query: 107 NIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 I+ K LPN F EKR F S ++ G++ICED W + + K Sbjct: 121 RIVGTYRKQELPNTEVFDEKRYFASNPQPFVFELEGVKFGVIICEDAW-HPSAALLAKAA 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 GA+ L N SPY+ NK R +I+ +I +P +Y+N VG QDEL+FDG SF D Sbjct: 180 GAQVLLVPNGSPYHVNKEDVRVDILRERIRETGMPAVYLNLVGAQDELVFDGGSFVLDAH 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 +L ++ F EQ + E+ Q + E Y A VL +RDY Sbjct: 240 GELMARLPQFVEQTAIVEFDGAQAQR----------GEIAPRECVEAQVYAALVLGVRDY 289 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 + KN F IIGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S+ DAA A+ + Sbjct: 290 LNKNGFPGAIIGLSGGVDSALVLAVACDALGAERVRAVMMPSRYTADMSMSDAAEMARRV 349 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G +YD + I + + F + ++ P ENIQ+RIRG +LMALSN +++LTT Sbjct: 350 GVRYDEIAIGPMFDAFRASLAAQFAGLPEDATEENIQARIRGTLLMALSNKFGSIVLTTG 409 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ + ++IP IL Sbjct: 410 NKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAATTFAT----RDIIPERILT 465 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGS 525 ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Y + V+ V L+ + Sbjct: 466 RAPSAELRENQTDQDSLPPYEVLDAIMRMYMEEDRSLEGIVAAGYARDDVQRVTRLIKIN 525 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 EYKRRQAP+G ++T ++FGRD YPI++ F + Sbjct: 526 EYKRRQAPIGIRVTHRAFGRDWRYPITSHFSE 557 >gi|152996972|ref|YP_001341807.1| NAD+ synthetase [Marinomonas sp. MWYL1] gi|150837896|gb|ABR71872.1| NAD+ synthetase [Marinomonas sp. MWYL1] Length = 545 Score = 596 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 225/555 (40%), Positives = 329/555 (59%), Gaps = 18/555 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKKSF 62 L+IA+AQL+ +VGDI N A +A + D+++F EL ++GYPPEDL+ + S Sbjct: 2 TLRIAMAQLDMLVGDITKNTQSVIDAANKARDEERADVVVFPELTLTGYPPEDLLLRSSL 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 SA+ L ++ HD +VVG+PR+ + N ++ G ++ K LPN+ Sbjct: 62 DTRIESALAKLLAEVHD--IYVVVGYPRRIDGELFNCAGVIYQGQLLVEYAKQKLPNFLV 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F +KR F G + + +++G+ ICEDIW + K GAE + +LNASPY+ Sbjct: 120 FDDKRYFSEGREAGLVDIKGVKVGLSICEDIW-HPGPIAQAKAAGAELILNLNASPYHIE 178 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K+ +R E++ + + V LPI+YVN +G QDEL+++G SF + + + Q F + Sbjct: 179 KMGEREELLHQRATEVTLPIVYVNYMGAQDELVYEGGSFVVNAKGEKIMQAPWFEAGLYS 238 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + D + A ++ L E + Y A VL LRDY+ KN F +++GLSGG Sbjct: 239 IDMIVDDSQPNK---VEPVAGSIAPALGVEASVYQAMVLGLRDYITKNRFKGIVLGLSGG 295 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL A+AVDA+G + VQ +M+PY YTS SL DA A LG KY VLPI +V+ F Sbjct: 296 IDSALSLAVAVDAIGADRVQAVMMPYTYTSSISLHDAEEEANLLGVKYSVLPIETMVSAF 355 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 +++ + EN+Q+R RG LMA+SN M+LTT NKSE++VGY TLYGDM Sbjct: 356 TDVLAPEFEGYGKDTTEENLQARTRGVTLMAISNKKGYMVLTTGNKSEMAVGYATLYGDM 415 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 GG++ LKD++KT VF+L +RN+ L VIP ++ + PSAEL P Q D++S Sbjct: 416 VGGYSVLKDVFKTLVFKLCRYRNT---------LGYVIPERVITRPPSAELAPDQKDEDS 466 Query: 483 LPPYPILDDIIKRIVENEESFINNDQ--EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 LP Y ILD+I++ +E ++S +++ ETV V L+ +EYKRRQAP G +ITA Sbjct: 467 LPSYDILDEILRMYIEEDQSAEAILATNQFDRETVYRVLRLVDVNEYKRRQAPTGVRITA 526 Query: 541 KSFGRDRLYPISNKF 555 + FGRDR YPI+N + Sbjct: 527 RGFGRDRRYPITNGW 541 >gi|78485716|ref|YP_391641.1| NAD+ synthetase [Thiomicrospira crunogena XCL-2] gi|78364002|gb|ABB41967.1| NH(3)-dependent NAD(+) synthetase [Thiomicrospira crunogena XCL-2] Length = 545 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 227/562 (40%), Positives = 341/562 (60%), Gaps = 22/562 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFK 59 M ++L I +AQ+NP+VGD+ GN + + ++A D+++F E+ ++GYPPEDL+F+ Sbjct: 1 MSEQLTIIMAQINPIVGDVEGNTSLIIESAKQAKMEHQADIVVFPEMTLTGYPPEDLLFR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLP 118 ++ Q S++ T+ D +V+G+P D+ N ++ G I A K NLP Sbjct: 61 EALYQQVESSLSTICEQVTD--TVLVIGYPMMDELGDRFNMAAWIEDGQIQASYIKQNLP 118 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NYS F EKR F SG + ++ ++ G+LICEDIWK + K GA+ L +LNASP Sbjct: 119 NYSVFDEKRYFSSGQQPCVVEYKGVKFGLLICEDIWK-LSPADQSVKAGADILLNLNASP 177 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + K + R +V ++ V P+IYVNQVGGQDEL+FDG SF + ++ Q F Sbjct: 178 FSQEKHQDRIRVVKRRVEEVKRPVIYVNQVGGQDELMFDGGSFATCAEGEVQVQGAEFK- 236 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 T+ + L Q + + + E Y A V+ ++DYV KN F V++G Sbjct: 237 ----TDLIPVKILKQADAVVILPGEKAELLQNE-ARVYEALVMGVKDYVHKNGFKGVLLG 291 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AIAVDALG V+ +M+P+KYT+ S+EDA A+ LG Y +PI + Sbjct: 292 LSGGIDSALTLAIAVDALGDNQVEAVMMPFKYTADISVEDAEKEAQVLGVHYHSIPIEPI 351 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + + S ++ + + EN+Q+RIRG +LM++SN + ++L TSNKSE++VGY TL Sbjct: 352 YDAYESALASRFEGYEEDVTEENMQARIRGVLLMSISNKTGKLVLATSNKSEVAVGYSTL 411 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GGF+PLKD+ KT V++LA +RN+ ++ VIP ++ + PSAELRP Q Sbjct: 412 YGDMVGGFSPLKDVPKTLVYRLAEYRNT---------ISSVIPERVITRPPSAELRPDQK 462 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQE--YNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+SLP Y +LD IIK V+ ++S +E Y+ + V + ++ +EYKRRQA G Sbjct: 463 DQDSLPDYEVLDTIIKAFVKEDKSPAQIVEEFGYDKQEVVRITKMISRNEYKRRQAAPGV 522 Query: 537 KITAKSFGRDRLYPISNKFRDH 558 KI+ ++FGRDR YPI++++ + Sbjct: 523 KISPRAFGRDRRYPITSRYAEE 544 >gi|221632485|ref|YP_002521706.1| glutamine-dependent NAD(+) synthetase [Thermomicrobium roseum DSM 5159] gi|221157196|gb|ACM06323.1| glutamine-dependent NAD(+) synthetase [Thermomicrobium roseum DSM 5159] Length = 586 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 222/591 (37%), Positives = 316/591 (53%), Gaps = 47/591 (7%) Query: 1 MLK-KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M + +IA+AQ++P VGD +GN+ R EA + G ++ F EL I+GYPPEDL+ K Sbjct: 5 MTRDTWRIALAQIDPTVGDFSGNVRLIRERAREAAQLGAHIVAFPELVITGYPPEDLLLK 64 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 SFI A A+ L D ++VG P + + N IL G I+AV K +LP Sbjct: 65 VSFIDAARRALHLLLDAIPDR--VLIVGVPWVESGILYNGAAILARGEIVAVVPKHHLPT 122 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F E R F G ++ ++R G+ ICEDIW L +G + L ++N SPY Sbjct: 123 YGVFDEDRYFARGSHTFRFLWGNLRFGVTICEDIWYPIGPASSLATRGIDLLVNINGSPY 182 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K +R ++ + + + YVN VGGQDEL+FDG S D + + F E Sbjct: 183 HRGKWIQRQVMLQTRAADAGCYLAYVNMVGGQDELVFDGNSIVLDPNGTILARGTSFEED 242 Query: 240 NFMTEWHYDQQLSQWNYMS---------------------------------DDSASTMY 266 + + + LS W + +S Sbjct: 243 LIVVDLPITRVLSSWLHDPRRRWLARAESQPALPVVDREIPLPVPGEQLPPLPESVQRPR 302 Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 PL+ Y A V +RDYV+K F +IGLSGGIDS+L A IA DALG ENV + + Sbjct: 303 TPLEGVAEVYQALVTGVRDYVRKTGFRTAVIGLSGGIDSSLTACIAADALGPENVTGLSM 362 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF-LQEEPSGIVAENIQSR 385 P +Y+S S+EDA A+ LG ++ ++PI + F +++ Q E + EN+Q+R Sbjct: 363 PSRYSSRHSIEDAEELARNLGIRFLIVPIEPVHRVFREVLAPLGNQPEEPDVADENLQAR 422 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 IRG ILM SN ++LTT NKSE++ GY TLYGDM+GGF LKD+ K V+QLA +RN Sbjct: 423 IRGTILMTYSNRFGPIVLTTGNKSEMACGYATLYGDMAGGFAVLKDVPKLLVYQLARYRN 482 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 S ++ VIP + K PSAELRP+Q D ++LPP+ ILD +++ VE + S Sbjct: 483 S---------ISPVIPERVFVKPPSAELRPNQKDVDTLPPFEILDPLLELYVEQDLSREE 533 Query: 506 NDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + ++ E V V ++ +EYKRRQA G K+T ++FGRDR PI+N F Sbjct: 534 LIRHGFDPEIVDRVIMMVDRAEYKRRQAAPGVKLTPRAFGRDRRLPIANWF 584 >gi|114770388|ref|ZP_01447926.1| NAD(+) synthase [alpha proteobacterium HTCC2255] gi|114549225|gb|EAU52108.1| NAD(+) synthase [alpha proteobacterium HTCC2255] Length = 552 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 249/559 (44%), Positives = 335/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K+ K+ +AQLN VGD GN+ KAR A A ++G D++ F E+F++GY +DLV K Sbjct: 1 MTKEFKLTMAQLNASVGDFDGNLNKARDAYSIACKEGADMLAFPEMFLTGYQTQDLVQKS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ S + + D G I +G P QD + V N+ IL G II K +LPNY Sbjct: 61 AFVEDAQSKLIEFAKECSD-GPTIGIGVPLQDGDKVYNAYAILQNGKIITQIRKHHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F SG + P V +R+G ICED W ++C+ L++ GAE L S N SPYY Sbjct: 120 KVFDEKRVFDSGEIHGPYVVNGVRIGSPICEDAW-FPDVCETLEETGAEILISPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K KR ++ + +LP+ Y+N VGGQD+ +FDG SF + LA QM F E Sbjct: 179 RGKFDKRISLMVSRAVENNLPMAYLNLVGGQDDQVFDGGSFVINSDGALALQMPLFEENI 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + P E DY+ VL+LRDY++K F K ++G+S Sbjct: 239 ETITF-----KRTQDRWVAQEGKKASYPDH-WEQDYHVMVLALRDYMKKTGFKKALLGMS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AAIA DALG ENV+ +MLP KYTS SL+DAA CA L K +PI D N Sbjct: 293 GGIDSALVAAIACDALGSENVRLVMLPSKYTSQNSLDDAANCANLLKAKIQTIPISDSFN 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + ENIQSR+RG +LM LSN MLLTT NKSE+SVGY T+YG Sbjct: 353 SVLKTLEPIFEGLDEDTTEENIQSRLRGLLLMGLSNKFNEMLLTTGNKSEVSVGYSTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGFNP+KDLYK +VF+ + WRN++ + G EVIP I++K P+AELR Q D Sbjct: 413 DMAGGFNPIKDLYKVRVFETSRWRNNNYFSWMKGSRGEVIPNEIIQKPPTAELRNDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y ILD I++ +++N+ S + Y V++VE LLY SEYKR Q+ GT+++ Sbjct: 473 DSLPDYEILDGILEMLMDNDASVADCVVAGYELSDVKHVEKLLYLSEYKRFQSAPGTRLS 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 K+F DR YPI+NK+RD+ Sbjct: 533 LKAFWLDRRYPIANKWRDN 551 >gi|16330978|ref|NP_441706.1| NAD synthetase [Synechocystis sp. PCC 6803] gi|8928223|sp|P74292|NADE_SYNY3 RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|1653472|dbj|BAA18386.1| NH(3)-dependent NAD(+) synthetase [Synechocystis sp. PCC 6803] Length = 558 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 219/569 (38%), Positives = 314/569 (55%), Gaps = 35/569 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 IA+AQLNP +G IA N K A +A +G DL+L EL + GYPP+DL+ SF++ Sbjct: 2 FTIALAQLNPTIGAIAENAEKIVTAALQAQARGADLLLTPELALCGYPPKDLLLNPSFVE 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-------RQDQEGVLNSVVILDAGNIIAVRDKINL 117 + L I+VG RQ Q+ + NS V+++ G I K L Sbjct: 62 QLEEELQWLAEKMPP-SIAILVGTVTPHHQAERQGQKKLWNSAVLIEQGQIKQWFHKCLL 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQG 167 P Y F E R F S ++ +++++++G+ ICED+W + N L QG Sbjct: 121 PTYDVFDEDRYFASAAKSEYFIYKNVKIGVTICEDLWNDEAFWGQKFYQVNPLMDLIDQG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + +L+ASPY K R +++ ++P+IYVNQVGG D+LIFDG SF + Q Sbjct: 181 VNLVVNLSASPYSCGKHYLRESLISHSAKRFNVPLIYVNQVGGNDDLIFDGGSFAVNSQG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + F E + + +P+ + E + A VL + DY+ Sbjct: 241 KIIGRSPLFQEDLALLSYDLSSGELT-------GQKLASLPMVDTEELWQALVLGVGDYL 293 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 K F K I+GLSGGIDS+L AAIAV+ALGKENV I++P Y+S S++DA A AK LG Sbjct: 294 HKCGFSKAILGLSGGIDSSLVAAIAVEALGKENVLGILMPSPYSSDHSIQDALALAKNLG 353 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 +PI ++ + + Q+ P G+ EN+QSRIRGN+LMA++N +LL+T N Sbjct: 354 MNTQTIPIGPIMATYDQALVPLFQDAPFGLAEENLQSRIRGNLLMAIANKFGHLLLSTGN 413 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KTQVF+L W N +IPPS+L K Sbjct: 414 KSELAVGYCTLYGDMNGGLAAIADVPKTQVFELCRWLNREQ---------TIIPPSVLTK 464 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSE 526 PSAEL+P Q D +SLPPY +LD I+ R+VE +S + + E V + L+ SE Sbjct: 465 PPSAELKPGQVDTDSLPPYDVLDGILGRLVEKHQSPQEIINAGFEREVVLKICQLVQKSE 524 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQA G K+T ++FG PI+ F Sbjct: 525 FKRRQAAPGLKVTDRAFGSGWRMPIAQAF 553 >gi|297544156|ref|YP_003676458.1| NAD+ synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841931|gb|ADH60447.1| NAD+ synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 543 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 224/564 (39%), Positives = 323/564 (57%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINRAKYQKADLVVFPELATVGYPPKDFLFMQDFLK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-QEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A I+ + G+++G RQD + + NS + G I+ V DK LPNY F Sbjct: 61 ANEKYINEIV-LPATYQIGVILGTVRQDTEGNLYNSAFFIYDGKIVEVFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEFLFS 173 EKR F F+ I+LG+ ICEDIWK+ ++ + K + + Sbjct: 120 DEKRYFKPAQLRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQYKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPYY K R E++ +I +P IYVNQVG DELIFDG+SF + + + Q+ Sbjct: 180 ISASPYYLGKQNMRVEMIEKKIKKYAIPFIYVNQVGANDELIFDGSSFVVNEEGKRVVQL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + + + + M +D + YNA VL +RDY +K+ F Sbjct: 240 KAFEEDIKIVDIDELKNFKELPEMKEDIS-----------WVYNALVLGVRDYCKKSGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A+ LG ++ V+ Sbjct: 289 KAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKSDARILAENLGIEFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE+++ Sbjct: 349 PIEPVFESYLSVFNGD-NSAIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDMSG P+ D+ KT V++LA + N E+IP SI+EK+PSAEL Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYELAKYINRK---------KEIIPISIIEKAPSAEL 458 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQA 532 RP+Q D++SLPPY ILD+I+K +E S ++ Y+++ V+ V + + EYKR+QA Sbjct: 459 RPNQKDEDSLPPYKILDEILKMYIEENRSVKEIVEKGYDEKLVKDVINKVNRVEYKRKQA 518 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 K+T K+FG R PI + F+ Sbjct: 519 APVLKVTTKAFGIGRRMPIVHNFK 542 >gi|223935581|ref|ZP_03627497.1| NAD+ synthetase [bacterium Ellin514] gi|223895589|gb|EEF62034.1| NAD+ synthetase [bacterium Ellin514] Length = 545 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 221/567 (38%), Positives = 316/567 (55%), Gaps = 39/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ+N VGD+AGN AK + A G+DL++F EL I+GYPP DL+ KK FI Sbjct: 1 MKVALAQINTTVGDLAGNEAKILAGYQRAVEAGVDLVMFPELTITGYPPRDLLHKKRFIA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPR----QDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ L + + G G++VG+ + + + N V +L G I+ R K LP Y Sbjct: 61 ENLEVLNRLAAVS--GKVGMLVGYVTENKTRPGKELSNCVALLQNGKIVESRIKTLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEF 170 F E R F N P+ F +LG+ ICEDIW + N L GA Sbjct: 119 DVFDEDRYFEPANENQPVEFNGTKLGLTICEDIWNDEDFWPERRYRHNPPMELAGAGAGI 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 LF+++ASP+ K + R+ ++ P+++ NQ+GG DELIFDG S F+ + L Sbjct: 179 LFNVSASPWSLGKEETRYNMLRSMAIKSKRPVVFCNQIGGNDELIFDGGSLAFNAEGTLI 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + F+E F+ + ++ + + +++ Y A VL LRDY+ K Sbjct: 239 GRGDMFAEDFFVVDTESSVEVPRMEWSAEE-------------FIYKALVLGLRDYLHKC 285 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F ++GLSGGIDSAL A IAVDALGKE+V+ + LP +Y+S SL+DA A+ LG +Y Sbjct: 286 GFKSAVLGLSGGIDSALTAVIAVDALGKEHVRGVSLPSQYSSQGSLDDAQILAERLGIRY 345 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 DV+PI ++ ENIQ+R+RG LMA+SN A+LLTT NKSE Sbjct: 346 DVVPIQPEFEAVKKQLASVFTGLKEDTTEENIQARLRGVTLMAMSNKFGALLLTTGNKSE 405 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM GG + D+ KT V+Q++ W N E+IP + K PS Sbjct: 406 LAVGYCTLYGDMCGGLAVISDVPKTMVYQISKWINREQ---------EIIPRDTITKPPS 456 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKR 529 AELRP+QTDQ+SLPPY +LD I+ V + + + TV+ V L+ +EYKR Sbjct: 457 AELRPNQTDQDSLPPYEVLDAILDAYVVQGKGMREIIALGFEEPTVKRVIRLIDFNEYKR 516 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFR 556 RQA G K+T+K+FG R PI+ K++ Sbjct: 517 RQAAPGLKVTSKAFGVGRRIPIAQKYQ 543 >gi|257058179|ref|YP_003136067.1| NAD synthetase [Cyanothece sp. PCC 8802] gi|256588345|gb|ACU99231.1| NAD+ synthetase [Cyanothece sp. PCC 8802] Length = 561 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 217/576 (37%), Positives = 327/576 (56%), Gaps = 41/576 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GD+A N K A + A Q L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQLNPIIGDLANNAQKINDAAQFAASQNARLLLTPELSLCGYPPRDLLLNPSFVK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-------RQDQEGVLNSVVILDAGNIIAVRDKINL 117 + S ++ L ++VG + ++ + NSV L+ G I + K L Sbjct: 61 SLSLELEQLSKKIPPQ-LAVLVGTVTANTDAYIKGEKPLFNSVAWLENGQIKQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI------RLGILICEDIWKN----------SNICK 161 PNY F E R F G ++ D ++G+ ICED+W + N Sbjct: 120 PNYDVFDEARYFEPGRQSNYFQLTDFESSEILKIGVTICEDLWNDQEFWGQKYYEHNPLA 179 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L G + + +L+ASPY K K R +++ +PI+Y NQ+GG D+LIFDG SF Sbjct: 180 DLIDFGVDLIVNLSASPYTVGKQKIREKMIKYSSQRYQIPIVYTNQIGGNDDLIFDGNSF 239 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL 281 + Q ++A ++K F E + ++ + + ++D + EEE + A VL Sbjct: 240 VVNRQGKIALRLKGFEENIQVVDFDLKAKDFCSSSLNDHT-------TIEEEEIWLALVL 292 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 L+DY +K F K ++GLSGGIDS+L AAIA +ALGK+NV +++P ++S S+ DA A Sbjct: 293 GLKDYGKKCGFSKAVLGLSGGIDSSLVAAIATEALGKDNVLGLLMPSPFSSEHSITDAEA 352 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 K LG PI D++N + +L+ GI EN+QSRIRGN+LMA++N + Sbjct: 353 LVKNLGINSYKFPIEDVMNSYDTLLHPLFLGTEFGIAEENLQSRIRGNLLMAIANKFGYL 412 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H TEVIP Sbjct: 413 LLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFSLCQWLNRH---------TEVIP 463 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 ++L K PSAEL+P+Q DQ+SLPPY ILD+I+ R++ +S +D ++ + + Sbjct: 464 HNVLIKPPSAELKPNQVDQDSLPPYDILDEILDRLIHRHQSVSQIHDAGFDLAVINKILK 523 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KR+QAP G K+T ++FG PI+++++ Sbjct: 524 LVIRAEFKRKQAPPGLKVTDRAFGTGWRMPIASRWK 559 >gi|289577867|ref|YP_003476494.1| NAD+ synthetase [Thermoanaerobacter italicus Ab9] gi|289527580|gb|ADD01932.1| NAD+ synthetase [Thermoanaerobacter italicus Ab9] Length = 543 Score = 594 bits (1532), Expect = e-167, Method: Composition-based stats. Identities = 222/564 (39%), Positives = 322/564 (57%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINRAKYQKADLVVFPELATVGYPPKDFLFMQDFLK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-QEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A ++ + G+++G RQD + + NS + G I+ V DK LPNY F Sbjct: 61 ANEKYVNEIV-LPATYQIGVILGTVRQDTEGNLYNSAFFIYDGKIVEVFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEFLFS 173 EKR F F+ I+LG+ ICEDIWK+ ++ + K + + Sbjct: 120 DEKRYFKPAQLRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQHKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPYY K R E++ +I +P IYVNQVG DELIFDG+SF + + + Q+ Sbjct: 180 ISASPYYLGKQNMRVEMIEKKIKKYAIPFIYVNQVGANDELIFDGSSFVVNEEGKRVVQL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + + + + M +D + YNA VL +RDY +K+ F Sbjct: 240 KAFEEDIKIVDIDELKNFKELPEMKEDIS-----------WVYNALVLGVRDYCKKSGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A LG ++ V+ Sbjct: 289 KAVVGLSGGIDSAVVCAIAVEALGKENVFAVSMPSRYSSEGSKSDARILADNLGIEFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE+++ Sbjct: 349 PIEPVFESYLSVFNGD-NSAIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDMSG P+ D+ KT V++LA + N E+IP SI+EK+PSAEL Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYELAKYINRK---------KEIIPISIIEKAPSAEL 458 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQA 532 RP+Q D++SLPPY +LD+I+K +E S ++ Y+++ V+ V + + EYKR+QA Sbjct: 459 RPNQKDEDSLPPYKVLDEILKMYIEENRSVKEIVEKGYDEKLVKDVINKVNRVEYKRKQA 518 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 K+T K+FG R PI + F+ Sbjct: 519 APVLKVTTKAFGIGRRMPIVHNFK 542 >gi|254511880|ref|ZP_05123947.1| glutamine-dependent NAD(+) synthetase [Rhodobacteraceae bacterium KLH11] gi|221535591|gb|EEE38579.1| glutamine-dependent NAD(+) synthetase [Rhodobacteraceae bacterium KLH11] Length = 552 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 240/559 (42%), Positives = 340/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +I +AQLNP+VGDI GN AKA+ A ++ DL+ E+FI+GY +DLV K Sbjct: 1 MADGFRITLAQLNPIVGDIEGNAAKAKAAWQQGRTAQADLVALPEMFITGYNTQDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F A A+ L D D G + +G P + + N+ +IL G I++ K +LPN Sbjct: 61 AFHHAAMDAVQALARDCAD-GPALAIGGPWFEDGKLYNAYLILKGGRIVSKALKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + +G P +IR+G ICED W + ++ + L++ GAEFL N SPY+ Sbjct: 120 TVFDEVRLYDAGPMGGPYAVGNIRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K R + + LP+IY+N VGGQD+ +FDGA+F + +LAF+M F E Sbjct: 179 RDKYDIRLNHMVARTVETGLPVIYLNMVGGQDDQVFDGATFGLNPGGELAFRMPVFDEAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + + E DY A V SLRDY+ K F KV++GLS Sbjct: 239 CTIDLERGDDGWRI------TPAEVVPQPDTWEQDYRAMVQSLRDYMGKTGFGKVVLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AAIAVDA+G NV+ +MLP +YTS SL+DA A AKALG YD +PI + Sbjct: 293 GGVDSALVAAIAVDAIGAGNVRCVMLPSEYTSQSSLDDAEAVAKALGVHYDFVPISEGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AVTNTLAPLFAGQDEDLTEENIQSRLRGLLLMAISNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI PS+++K PSAELR Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPAGEVIRPSVIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I+ +V+ + S + +++ R VEHL+Y SEYKR Q+ GT++T Sbjct: 473 DSLPDYPVLDAILDILVDQDGSIADCVAAGFDEVEARRVEHLIYISEYKRFQSAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 533 PRAFWLDRRYPIVNRWRDR 551 >gi|83592026|ref|YP_425778.1| NAD synthetase [Rhodospirillum rubrum ATCC 11170] gi|83574940|gb|ABC21491.1| NH(3)-dependent NAD(+) synthetase [Rhodospirillum rubrum ATCC 11170] Length = 558 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 250/557 (44%), Positives = 340/557 (61%), Gaps = 10/557 (1%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++L +A+ Q+NP VGD++GN+ + R AR EA R G +L+L TEL ++GYPPEDLV + S Sbjct: 7 SERLTLALCQINPWVGDLSGNLERLRAARAEAARLGAELVLATELALTGYPPEDLVLRDS 66 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ + TL +DT DGG G++VG P + + G N+ ++LD G I + K +LPNY Sbjct: 67 FMAQAREVVATLAADTADGGPGVIVGVPWRSEAGGRHNAALLLDNGAIAGMVFKHHLPNY 126 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G P++FR RLG++ICED+W ++ L GAE L N SP+ Sbjct: 127 GVFDEKRVFDPGPKPAPLIFRGWRLGVMICEDMW-FPDVAAALVAGGAEILLVPNGSPFD 185 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + +++ LP++YVNQV GQDEL+FDGASF G L + + E Sbjct: 186 LEKTEARLDHARARVTESGLPLVYVNQVCGQDELVFDGASFVMGGDGALRMTVAPWREAV 245 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ + D A + P Y A VL LRDYV KN F VI+GLS Sbjct: 246 SPVVF------TRKDGRVDTPAQPIPPPPPVAADIYQAMVLGLRDYVTKNGFPGVILGLS 299 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+AVDALG E V +M+P YTS +SLEDAAACA+ LG + D + I + Sbjct: 300 GGIDSALSAAVAVDALGAERVWCVMMPSPYTSAESLEDAAACARLLGTRLDTIDIGPAMA 359 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +++ + I EN+QSR RG LMALSN M+L+T NKSE+SVGY TLYG Sbjct: 360 AFGAMLEPHFAGRAADITEENLQSRARGLTLMALSNKFGPMVLSTGNKSEMSVGYATLYG 419 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG++ LKD+YKT VF ++ WRN++ LGP V+P ++ K+PSAELRP Q D+ Sbjct: 420 DMCGGYSVLKDVYKTAVFAVSRWRNANHPEGALGPEGPVMPERVITKAPSAELRPDQKDE 479 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQE--YNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLPPY LD ++ ++E + E V V LL +EYKRRQAP G KI Sbjct: 480 DSLPPYVDLDRVLHLLIEEQRGIAAATAESGLPRPLVERVWTLLQRAEYKRRQAPPGVKI 539 Query: 539 TAKSFGRDRLYPISNKF 555 +A +FGRDR YPI++ + Sbjct: 540 SALAFGRDRRYPITHAY 556 >gi|284044933|ref|YP_003395273.1| NAD+ synthetase [Conexibacter woesei DSM 14684] gi|283949154|gb|ADB51898.1| NAD+ synthetase [Conexibacter woesei DSM 14684] Length = 587 Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats. Identities = 214/583 (36%), Positives = 321/583 (55%), Gaps = 36/583 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L++A+ Q+N VGDIAGN K A Q +L+LF EL ++GYPPEDL+ K+ F+ Sbjct: 10 PLRLALCQMNATVGDIAGNERKISDGIAAARGQQAELVLFPELALTGYPPEDLLLKEHFL 69 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 Q A+D L ++TH G +VGFP +D + V N++ +L G + + K LPNY F Sbjct: 70 QDTRRALDRLAAETH--GIVALVGFPERDDD-VYNALAVLADGAVQGIYRKNYLPNYGVF 126 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F +G I ++++G+ ICEDIW+ GA + +L+ASPY+ K Sbjct: 127 DEQRYFATGDGGALIEVGEVKIGLTICEDIWEPGAPASDEAYAGASVIVNLSASPYHAGK 186 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +R ++ + + + VGGQDEL+FDG S D + ++ + F+E+ + Sbjct: 187 AVERERMLIQRARDSMCVVAFCGLVGGQDELVFDGHSLVVDHRGEVIARAGQFTEELLVA 246 Query: 244 EWH---------YDQQLSQWNYMSDDSASTMYIPLQEEEAD------------------- 275 D + + + + L E AD Sbjct: 247 TVDPLAPRTYRLRDARHRAAGRDARPVPTIARLELPETPADDEHPLTRGPIAPLLEPTAE 306 Query: 276 -YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 Y A V LRDYV+KN F +V++GLSGG+DSAL A +AVDALG + V ++P Y+S + Sbjct: 307 VYTALVCGLRDYVRKNGFDRVVLGLSGGVDSALVACVAVDALGPDGVAVAVMPSPYSSQE 366 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 + DA A LG + I + + S ++ + EN+Q+RIRGN+LMAL Sbjct: 367 TQADARQLADNLGVERYEFNIQPAMRAYASTLADTFAGRKPDLTEENLQARIRGNLLMAL 426 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN ++L T NKSE+SVGY TLYGD++GGF +KD K +V++L +R++ + Sbjct: 427 SNKFGWLVLATGNKSEMSVGYSTLYGDLAGGFAVIKDCPKLRVYELTRYRDALARETT-- 484 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDE 513 E++P I+++ PSAELRP Q D++SLPPY +LD I+ VE + + + ++ Sbjct: 485 -GRELVPAMIIDRPPSAELRPDQKDEDSLPPYAVLDPILDGYVEQDLGRDQLILRGFREQ 543 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 V V L+ +EYKRRQAP G KIT+++FGRDR PI+NK+R Sbjct: 544 DVDKVIALVDRAEYKRRQAPPGIKITSRAFGRDRRVPITNKYR 586 >gi|283851424|ref|ZP_06368705.1| NAD+ synthetase [Desulfovibrio sp. FW1012B] gi|283573162|gb|EFC21141.1| NAD+ synthetase [Desulfovibrio sp. FW1012B] Length = 587 Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats. Identities = 206/583 (35%), Positives = 297/583 (50%), Gaps = 39/583 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++A+ Q+NP VGD+ GN AK E A R G ++++F E+ +SGYPPEDL+ K Sbjct: 1 MAAFRLALCQINPTVGDVDGNTAKILAHLESARRAGAEMVVFPEMAVSGYPPEDLLIKPD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC + + G +V G P D + ++N+ ++ G + K LPNY Sbjct: 61 FLDACMDRAGEIIRAST--GLTVVFGCPWLDGD-LVNAAIVAHDGRAAGLTAKRYLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-NICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + G+ +CEDIW + GA L +++ASPY+ Sbjct: 118 VFDENRYFAAGRGSAVYDRDGFVFGVSVCEDIWYPGGPPSEQAHGGGARLLVNISASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ + S + Y N VGGQDEL+FDG S F L + + F E Sbjct: 178 GGKGLGRERMLATRASDNGTFVAYANLVGGQDELVFDGHSLVFGPDGTLLARGRQFEEDL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD------------------------- 275 + + + D Sbjct: 238 VVCDLDPGAPTRMRLLDPRSRKWEPQLESCPVRVDLPPLAAPARPPLPGCPVAPLCGSVE 297 Query: 276 --YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A VL+ RDYV+K+ F V +GLSGGIDS+L A IA DALG ENV + +P +++S Sbjct: 298 EAYRALVLATRDYVRKSGFSAVAMGLSGGIDSSLTAVIAADALGPENVMGVAMPTRFSSD 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 SLEDA A A+ LG V+ I ++ F ++ + P + EN+Q RIRG +LMA Sbjct: 358 DSLEDAEALAEKLGITLHVVAIENIFKAFLEALAPLFGDRPFDVAEENLQPRIRGTLLMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN ++LTT NKSE+ VGY TLYGD +GG+ +KD+ KT V+ L+ WRN Sbjct: 418 LSNKLGRLVLTTGNKSEVGVGYSTLYGDTAGGYAVIKDVPKTLVYALSRWRNEQAG---- 473 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYND 512 T++IP +L K P+AELRP+Q D +SLP Y +LD ++K VE S + Sbjct: 474 ---TDLIPERVLVKPPTAELRPNQKDSDSLPEYDVLDPVLKAYVELSLSPTAMAGAGMDP 530 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + V L+ +EYKRRQ+P G KIT ++FG+D PI N++ Sbjct: 531 AVIDRVTKLVDRNEYKRRQSPPGPKITPRAFGKDWRLPIVNRY 573 >gi|222100295|ref|YP_002534863.1| glutamine-dependent NAD(+) synthetase [Thermotoga neapolitana DSM 4359] gi|221572685|gb|ACM23497.1| glutamine-dependent NAD(+) synthetase [Thermotoga neapolitana DSM 4359] Length = 555 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 216/563 (38%), Positives = 314/563 (55%), Gaps = 34/563 (6%) Query: 23 IAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGA 82 + KA A + A +G DL++F ELF+ GYPPEDL+ + SF++ + L S T Sbjct: 1 MKKAIEALKTAEERGSDLLIFPELFLPGYPPEDLMLRLSFLRENRRYLLELASHTKSCEV 60 Query: 83 GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRD 142 ++VGF D++ N+ +L G ++ V K+ LPNY F E+R F G + D Sbjct: 61 TVLVGFIDSDEDA-YNAAAVLKRGEVLGVYRKMFLPNYGVFDERRYFKPGEELLVLKMGD 119 Query: 143 IRLGILICEDIWKNSNICKHLKK-QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLP 201 +++G+ ICEDIW L +G + +L+ASPY+ K + R E ++ + H Sbjct: 120 VKIGVTICEDIWNPVEPSASLSLGEGVHLVANLSASPYHVGKPRLRKEYLSMKAYDYHTA 179 Query: 202 IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW------- 254 I Y N VGGQDEL+FDG S D ++ K F E+ + D+ L Sbjct: 180 IAYCNMVGGQDELVFDGGSIVVDASGEVISYGKLFEEEIITVDLDLDENLRVSLLDPRRR 239 Query: 255 -----------------NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 S ++ + EE + A V +RDYV+KN F KV+I Sbjct: 240 YMRSQNYPVKIVDVGGLRRKSSHFDPLIHPIPKREEEMFRALVTGVRDYVRKNGFEKVVI 299 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGG+DS+L A IA +ALGKENV+ +++P YTS SLEDA A+ LG + ++PI D Sbjct: 300 GLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKSSLEDAQKLAENLGIETFIIPITD 359 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + + + I ENIQ+RIRGN LMALSN ++LTT NKSE++ GY T Sbjct: 360 VFRSYLDALKEVFAGKEPDITEENIQARIRGNYLMALSNKFGWLVLTTGNKSEMATGYAT 419 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF +KD+YKT V+++ W N E+IP ++ K PSAELRP Q Sbjct: 420 LYGDMAGGFAVIKDVYKTDVYRIGRWYNEWKGR-------EIIPENVFVKPPSAELRPGQ 472 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQE LPPY ILD+I+K +E + ++ + V V ++ +EYKR+QA +GT Sbjct: 473 TDQEKLPPYEILDEILKLYIEEGLDPEEIALKGFDKKMVVEVTEMVRKNEYKRKQAAIGT 532 Query: 537 KITAKSFGRDRLYPISNKFRDHI 559 KI+ ++FG+D PI+N+FR+ + Sbjct: 533 KISTRAFGKDWRMPITNRFREPL 555 >gi|326316969|ref|YP_004234641.1| NAD+ synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373805|gb|ADX46074.1| NAD+ synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 550 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 221/556 (39%), Positives = 311/556 (55%), Gaps = 17/556 (3%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQ N +VGD+ GN K A EA+ QG L+L EL + GY EDL + +F+ AC Sbjct: 5 ISIAQFNFIVGDVEGNARKIISAAHEAHAQGAALLLTPELALCGYAAEDLFLRPAFLDAC 64 Query: 67 SSAIDTLKSDT-HDGGAGIVVGFPRQ----DQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A+ + T G +VVG P + E N+ +L G I K LPNY+ Sbjct: 65 DRALQDIAQATSACGDLAVVVGHPWRSVAGGAERCHNAASVLRGGRIEQTYAKQELPNYA 124 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E+R F G + +R+G+LICED W + + +LNASP++ Sbjct: 125 VFDEQRYFDPGTQPCVFDVQGVRVGLLICEDAWFPGPAARAAQAGAQLL-ATLNASPFHL 183 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R +I+ +++ LP++Y + VGGQDE++F+G SF D + + F+E Sbjct: 184 GKSAEREQIMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALDANGFVGVRAPGFTEALV 243 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 H + ++ + E ++A VL +RDYV KN F V++GLSG Sbjct: 244 RVVAHAGDGVLRFE-------PDVAPIPAPEADLWSALVLGVRDYVGKNGFPGVLLGLSG 296 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL AIAVDALG + V+ +M+P YT+ S DA A+ LG +YD + I Sbjct: 297 GIDSALVLAIAVDALGADKVRAVMMPSPYTADISWIDARDMAERLGVRYDEIAIAPQFEA 356 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + ++ EN+Q+RIRG +LMALSN +++LTT NKSE++ GY TLYGD Sbjct: 357 FKAALASEFAGRAEDATEENLQARIRGTLLMALSNKFGSVVLTTGNKSEMATGYCTLYGD 416 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF +KD+ KT V+ LA WRN+H G IP I+ + PSAELRP Q DQ+ Sbjct: 417 MAGGFAVIKDVAKTAVYGLARWRNAHDP---FGTGASPIPERIITRPPSAELRPDQKDQD 473 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LD I+ R +EN+E + Y V V L+ +EYKRRQAPVG ++T Sbjct: 474 SLPPYDVLDAIVGRYMENDEPIESIIAAGYARADVERVTRLIQVNEYKRRQAPVGIRVTR 533 Query: 541 KSFGRDRLYPISNKFR 556 +SFG+D YPI+N+FR Sbjct: 534 RSFGKDWRYPITNRFR 549 >gi|332530579|ref|ZP_08406516.1| NAD+ synthetase [Hylemonella gracilis ATCC 19624] gi|332039985|gb|EGI76374.1| NAD+ synthetase [Hylemonella gracilis ATCC 19624] Length = 565 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 238/574 (41%), Positives = 322/574 (56%), Gaps = 32/574 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L++ +AQ N VVGD++GN K +A QG+ L+L EL I GY EDL+ + SFI Sbjct: 2 SLRLGVAQSNFVVGDLSGNAQKIIATARQACTQGVHLLLTPELAICGYAAEDLLLRPSFI 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG-----------VLNSVVILDAGNIIAV 111 AC A+ T+ + D G +VVG P ++G N+ +L AG +IA Sbjct: 62 AACDEAVRTVAKELADLEGLTVVVGHPAATEDGGWRTRSVMRPGRFNAASVLRAGQVIAR 121 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQG 167 K LPNY F E+R F G R+G+LICED W + N + + G Sbjct: 122 YAKRELPNYQVFDERRYFEPGDQPCVFEVEADGERTRVGLLICEDSWFD-NPARETRAAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 AE L +NASP++ K +R + ++ LP++Y + VGGQDE +F+G SF Sbjct: 181 AELLAVINASPFHAGKGDERETAMAQRVRDHGLPLVYAHLVGGQDEAVFEGRSFALQPSG 240 Query: 228 Q----LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 + LA + F+E F+ + D + + + + ++A VL + Sbjct: 241 EGEVSLAARAPSFAEDLFVMDARRDAAGLRL-------SGPIAPERDRDADLWDALVLGV 293 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDYV KN F IIGLSGGIDSAL AIAVDALG V+T+M+P YT+ S DA A Sbjct: 294 RDYVGKNGFPGAIIGLSGGIDSALVLAIAVDALGPAKVRTVMMPSPYTADISWIDARDMA 353 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 L +YD + I F + ++Q P ENIQ+RIRG +LMALSN S ++L Sbjct: 354 ARLRVQYDEISIVPEFEAFKTSLAQEFAGLPEDTTEENIQARIRGTLLMALSNKSGRIVL 413 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++ GY TLYGDM+GGF +KD+ KT VF+LA WRN+H G T IP Sbjct: 414 TTGNKSEMATGYCTLYGDMAGGFAVIKDVLKTTVFRLARWRNAHDP---YGTGTAPIPER 470 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLL 522 I+ + PSAELRP QTDQ+SLPPY +LD I++R +EN++S Y V V LL Sbjct: 471 IITRPPSAELRPDQTDQDSLPPYEVLDAIVERYMENDDSVEAIVAAGYARADVERVTRLL 530 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +EYKRRQAPVG ++T + FG+D YPI+NKFR Sbjct: 531 RLNEYKRRQAPVGIRVTHRGFGKDWRYPITNKFR 564 >gi|114569533|ref|YP_756213.1| NH(3)-dependent NAD(+) synthetase [Maricaulis maris MCS10] gi|114339995|gb|ABI65275.1| NH(3)-dependent NAD(+) synthetase [Maricaulis maris MCS10] Length = 552 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 258/560 (46%), Positives = 363/560 (64%), Gaps = 11/560 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ + AQLNPVVGD+AGN+AKAR A EA +G D+++F E+F+ GYPPEDLV K Sbjct: 1 MTDRIILVTAQLNPVVGDVAGNLAKARAAHAEAKTRGGDMVVFPEMFLLGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S ++AC SA+D L + T D G I++G P + + N+V +LD G ++A+R K LPNY Sbjct: 61 SAVEACRSALDALAAITRD-GPAILIGLPWKQNSCLYNAVALLDEGRLVALRFKRELPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F EKR F +G D + +R I+LG+ ICED+W ++ + L +GAE + +LN SP+ Sbjct: 120 AVFDEKRVFEAGPLPDIVKWRGIKLGLPICEDLWL-GDVPRALIDKGAEMIITLNGSPWR 178 Query: 181 HNKLKKRHEIVTGQISHVHLP--IIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 ++R + +G P +I+VNQVGGQDEL+FDGASF D + + ++ F E Sbjct: 179 RTIERERKQAFSGWFDSWASPKAMIFVNQVGGQDELVFDGASFSRDSEGREVQRLPAFEE 238 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 EW + + + + EAD+ A +L DY+ KN F V++G Sbjct: 239 AIDAVEWV------RTDKGWFGAGGQIVSVKSGLEADWKAMTRALGDYIGKNGFPGVVLG 292 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSA+ AAIAVDALG + V +M+P KYTS +S EDA ACA+ALG +YD++ + Sbjct: 293 MSGGIDSAISAAIAVDALGADKVWAVMMPSKYTSQESFEDAKACAEALGIRYDIIDVEPT 352 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + F +++S + EN+QSR RG +LMALSN M+L+T NKSE++VGY TL Sbjct: 353 IASFNAILSTPFKGTKPDTTEENLQSRARGVVLMALSNKFGPMVLSTGNKSEMAVGYATL 412 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM+GG+N LKD+YKT+VF+LA WRNS GLGP+ +VIP I+ K PSAEL Q Sbjct: 413 YGDMNGGYNALKDIYKTEVFELAWWRNSANHQVGLGPVGQVIPERIITKPPSAELAEDQK 472 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D++SLPPY +LD I+ ++E E S +++ V+ +E+LLY +EYKRRQAP G K Sbjct: 473 DEDSLPPYDVLDAILYGLIEEERSVRELVADGHDEAEVKRIENLLYRAEYKRRQAPPGVK 532 Query: 538 ITAKSFGRDRLYPISNKFRD 557 I K+FGRDR YPI+N+FR+ Sbjct: 533 IGPKNFGRDRRYPITNRFRN 552 >gi|145297764|ref|YP_001140605.1| NAD synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850536|gb|ABO88857.1| NH(3)-dependent NAD+ synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 540 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 229/556 (41%), Positives = 336/556 (60%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L + +AQLN VG I N K A +A +QG DL++ +EL ++GYPPEDL+ + Sbjct: 1 MAKALSLMLAQLNLTVGAIEDNCDKVLAAAVQAEQQGADLLVCSELALTGYPPEDLLLRS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + +A+ + T G I+VG P ++ + N+ + + G ++A K +LPNY Sbjct: 61 DLMIRVDAALARIA--TWQGRCAILVGHPWREGAALYNAASLYEQGKLVARYFKQDLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F +G + FR +LG+LICED+W+ + K GAE L ++NASPY Sbjct: 119 GVFDEKRYFTAGTDTCVVPFRGHKLGLLICEDLWQPGPVLA-AKAAGAELLLTINASPYD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R E++T + S LP++Y+NQV GQDELIFDG S F+ Q +L ++ F+E+ Sbjct: 178 QEKPWIRRELMTERCSQTGLPLVYLNQVCGQDELIFDGCSKVFNSQGELTHKLAPFAEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + Q + + PL+ Y A VL++ DY+ KN F ++GLS Sbjct: 238 ALVHFADGQPVKE---------REPAAPLEPLAETYQALVLAVHDYITKNGFQGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G + VQ +M+P++YT+ S+EDA A+ +G ++D++ I + Sbjct: 289 GGIDSALTLAIAADAIGADKVQAVMMPFRYTAQMSVEDAKEQAERMGVEFDIISIEPMFE 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 GFMTQLAPLFAGTARDTTEENLQARCRGVLLMALSNKRRRIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L +RNS + VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLCEYRNS---------VDYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I+KR VE + S + + + + VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILKRYVEEDASVADMVAEGFEEVVVRKVIRLVDLNEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|329902389|ref|ZP_08273093.1| NAD synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327548804|gb|EGF33438.1| NAD synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 537 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 232/555 (41%), Positives = 324/555 (58%), Gaps = 22/555 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +K+AIAQ+N VGD++GN AK E A QG D+++ E+ + GYPPEDL+ + +F Sbjct: 2 TVKVAIAQINSTVGDLSGNRAKIFAFAERAAGQGADIVVTPEMSLVGYPPEDLLLRDAFY 61 Query: 64 QACSSAIDTLKSDTH-DGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + + L +D G ++VG P N+VV+L G+I+A K LPN + Sbjct: 62 AQSAEQVAGLAADLAVFAGLHVLVGLPLLKDGARFNAVVVLADGHIVATYCKSELPNDAV 121 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F SG + + + GI ICED W + A+ L N SPY+ N Sbjct: 122 FDEKRYFSSGDQACVLTIKGVTFGINICEDTWFDRAPALARAAG-AQVLLVPNGSPYHMN 180 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 KL R++I+ + L ++YVN VGGQDELIFDG SF D QL Q+ H E + Sbjct: 181 KLHLRYDIMRANVCAQGLSLVYVNLVGGQDELIFDGNSFVMDQSGQLQAQLSHVDEDLQL 240 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E+ + L E Y A VL +RDY+ KN F V++GLSGG Sbjct: 241 VEFD----------GATPLPGKFAPRLSVEAQVYQALVLGVRDYIGKNGFPGVLLGLSGG 290 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +DSAL A+AVDALG + V+T+M+P YT+ S D+ A+ G +YD + I + + F Sbjct: 291 VDSALTLAVAVDALGADKVRTVMMPSPYTAEISWIDSRDMAQRTGVRYDEIAIGNCFDAF 350 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 +++ P ENIQ+RIRG ILMALSN +++LTT NKSE++VGY TLYGDM Sbjct: 351 LGTLAEDFAGLPLDATEENIQARIRGTILMALSNKHGSIVLTTGNKSEMAVGYCTLYGDM 410 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF LKD+ KT V++L ++RN+ ++ VIP IL ++PSAELRP QTDQ+S Sbjct: 411 AGGFAVLKDIAKTLVYRLCAYRNA---------ISPVIPERILTRAPSAELRPDQTDQDS 461 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY ILD I++ +E S + + E VR + HL+ +EYKRRQ+PVG ++T + Sbjct: 462 LPPYEILDGIMQLFMEENRSVDDVIAAGFQAEDVRRITHLIKINEYKRRQSPVGIRVTHR 521 Query: 542 SFGRDRLYPISNKFR 556 +FGRD YPI++KFR Sbjct: 522 AFGRDWRYPITSKFR 536 >gi|256375054|ref|YP_003098714.1| NAD+ synthetase [Actinosynnema mirum DSM 43827] gi|255919357|gb|ACU34868.1| NAD+ synthetase [Actinosynnema mirum DSM 43827] Length = 571 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 211/579 (36%), Positives = 311/579 (53%), Gaps = 32/579 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ+N VGD+AGN A +A G L++F E+ ++GYP EDLV ++S Sbjct: 1 MPQLRLALAQVNACVGDLAGNSALVVDWTRKAVEAGAHLVVFPEMVLTGYPVEDLVLRES 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F A +A+ L + GG + G+ D+ G NS +L G ++A + K +LP Sbjct: 61 FTSASKAALTDLAATLDREGLGGIAVFAGYLDGDERGKRNSAAVLHGGQVVARQHKHHLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F E+R F G + + + + +G++ICED+W++ L + G + + S NASP Sbjct: 121 NYGVFDERRYFRRGDALEVVRLHGVEVGLVICEDLWQDGGPVAALGQAGVDLVVSPNASP 180 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R +V + + P+ YVN +GGQDEL+FDG + L + F E Sbjct: 181 YERKKDDVRLPLVARRAAEAGAPLAYVNLIGGQDELVFDGDTMVVGADGSLLTRAPQFVE 240 Query: 239 QNFMTEWHYDQQLSQW-------------------NYMSDDSASTMYIPLQEEEADYNAC 279 + + ++ PL +E ++A Sbjct: 241 HLVVLDLDLPGGAARTEGDVAGFHVTRKVISDEPLPRYEPLPVPASAEPLSDEAEVWHAL 300 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V LRDYV KN F V++GLSGGIDSA+ A++AVDALG ++V + +P Y+S S DA Sbjct: 301 VTGLRDYVHKNGFRSVVLGLSGGIDSAVVASLAVDALGADSVHGVSMPSVYSSDHSRSDA 360 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A+ G Y PI +V F + +G+ EN+Q+R RG LM LSN Sbjct: 361 EDLAQRTGLHYSEQPIPTMVAAFVDQLG------LTGLAEENVQARCRGMTLMGLSNQHG 414 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++L T NK+E++VGY T+YGD GGF P+KD+ KT V+ LA WRN+ G P Sbjct: 415 HLVLATGNKTELAVGYSTIYGDAVGGFAPIKDVLKTLVWDLARWRNAEAEKRGELP---P 471 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYV 518 IP + + K PSAELRP Q D +SLP Y +LD ++ VE ++ + D + E V V Sbjct: 472 IPENSISKPPSAELRPGQVDTDSLPDYELLDSVLDDYVEGDKGYRALLDSGFAPELVDRV 531 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ +EYKRRQ P GTKI+ K+FGRDR PI+N +R+ Sbjct: 532 LRMVDRAEYKRRQYPPGTKISNKAFGRDRRLPITNGWRE 570 >gi|323705926|ref|ZP_08117497.1| NAD+ synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534724|gb|EGB24504.1| NAD+ synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 545 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 220/566 (38%), Positives = 318/566 (56%), Gaps = 36/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLNP VGDI N K +EA + MDLI+F EL I GYPP+DL++ F++ Sbjct: 1 MKIALAQLNPTVGDIKNNCEKIIMNIKEAKKAQMDLIVFPELSIIGYPPKDLLYNPDFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNYS 121 ++ + G G++VG +D+E + NS ++L G I+ DK LPNY Sbjct: 61 TADRMLNDIL-LPETEGIGVIVGTVTRDEEKDYLLHNSALLLYNGKIVGQADKTLLPNYD 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ----------GAEFL 171 F E+R F I F+ +RL I ICEDIW + + + + + Sbjct: 120 VFDEQRYFEPAKKRACIDFKGVRLAINICEDIWNDKDFWERPRYDIDVLEEQYSLNPDIF 179 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +++ASPY K + + ++V LP+IYVNQVGG DELIFDG SF + + Sbjct: 180 INISASPYNLGKHELKVKMVKQISKKYKLPLIYVNQVGGNDELIFDGNSFVINSNGERVV 239 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 +K F E + + + + + ++A +L LRDY +K Sbjct: 240 NLKAFCEDLAFIDTD-----------ELEYLAPLKDINENISWVHDALILGLRDYFRKTG 288 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F K ++GLSGGIDSA+ A+AV ALG+ENV + +P +Y+S S +DA A+ L +Y Sbjct: 289 FKKAVVGLSGGIDSAVTCALAVKALGRENVLGVSMPSRYSSEGSKDDARDLAQNLNIEYR 348 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V+PI D+ + S+ ++ + EN+Q+RIRGN LM +SN M+LTT NKSEI Sbjct: 349 VIPIEDVFKSYISIFNKD-GNIVGDLAEENLQARIRGNYLMFISNREGHMVLTTGNKSEI 407 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDMSGG + D+ KT V++LA + N I +IP S +EK+PSA Sbjct: 408 AVGYCTLYGDMSGGLAVISDVPKTMVYELAKYINRENI---------IIPISTIEKAPSA 458 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q D +SLPPY ILDDI+K +E ++S + Y++ V+ V + +EYKR+ Sbjct: 459 ELRPNQKDTDSLPPYEILDDILKLYIEEDKSISEIVSRGYDEALVKDVIRKVNSAEYKRK 518 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QA G K+T K+FG R PI+ +FR Sbjct: 519 QAAPGLKVTTKAFGVGRRMPIAQRFR 544 >gi|159043154|ref|YP_001531948.1| NAD synthetase [Dinoroseobacter shibae DFL 12] gi|157910914|gb|ABV92347.1| glutamine-dependent NAD(+) synthetase [Dinoroseobacter shibae DFL 12] Length = 557 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 235/558 (42%), Positives = 333/558 (59%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ + QLNP +G ++ N KA RA +E G + E+F++GY +DLV + Sbjct: 1 MSDTFRLTLGQLNPTLGALSENAQKALRAWQEGKLAGAQFVALPEMFLTGYQTQDLVMRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + L D D G + +G P + NS IL+ G + A K +LPN Sbjct: 61 AFAADAERVLQGLARDCAD-GPALGIGCPLVQGGKLYNSYAILEGGAVKARVLKHHLPNS 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F +G + P +R+G ICED W ++ + L + AE LF N SPY+ Sbjct: 120 DVFDEERLFTAGPVSGPYRIGPLRIGTPICEDAW-YPDVAETLAESAAEILFVPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ ++ LP+IY+N VGGQD+ +FDGASF + LA Q+ E Sbjct: 179 RGKHDTRLNLMVARVIETGLPLIYLNMVGGQDDQMFDGASFALNTHGALAMQLPAMEE-- 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 H D + + +D+ E EADY V SLRDY++K+ F KV++GLS Sbjct: 237 --VIAHLDLTQTAEGWRIEDARKDPLP--DEWEADYRVMVESLRDYLRKSGFGKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ AAIA DA+G +NV+ +MLP +YTS +SLEDA A A+ LGC+ D LPI Sbjct: 293 GGIDSAIVAAIAADAIGPQNVRCVMLPSEYTSQESLEDAEAVARNLGCRIDTLPITGPRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 +++ F PSGI EN+QSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AVTEVLAPFFNGTPSGIAEENVQSRLRGVLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN LGP E+IP ++EK PSAELR Q D+ Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNETHRPWMLGPEGELIPDRVIEKPPSAELRADQKDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ +++ E S ++ +TV+ +EHL++ SEYKR Q+ G ++T Sbjct: 473 DSLPPYGVLDAILEGLIDREASVAELVADGFDLDTVKKIEHLIFISEYKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N++RD Sbjct: 533 KRAFWLDRRYPIVNRWRD 550 >gi|302524481|ref|ZP_07276823.1| glutamine-dependent NAD(+) synthetase [Streptomyces sp. AA4] gi|302433376|gb|EFL05192.1| glutamine-dependent NAD(+) synthetase [Streptomyces sp. AA4] Length = 590 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 220/582 (37%), Positives = 330/582 (56%), Gaps = 32/582 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ+N VGDI GN A +A G +++F E+ +GYP EDL +++ Sbjct: 18 MPQLRIALAQVNTTVGDIDGNTALTVEWTRKAAEAGAHVVVFPEMSQTGYPVEDLTLRRT 77 Query: 62 FIQACSSAIDTLKSDTHDGGAGIV---VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F A ++ L + G G V VG+ D+ G ++ L G ++A + K +LP Sbjct: 78 FADASRRSVTELARRLDEAGCGEVLAYVGYLDHDEVGPRDAAAALYRGEVVARQFKHHLP 137 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F E R F G + + + +G++ICEDIW++ L K G + + + NASP Sbjct: 138 NYGVFDEHRYFKPGTELEVLRLHGVDIGMVICEDIWQDGGPISALGKAGVDLVVAPNASP 197 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y +K ++R ++ + + P++Y NQVGGQD+L+FDG S L + F E Sbjct: 198 YERSKDEQRLPLIARRAAEAGAPLVYTNQVGGQDDLVFDGDSLVVGADGTLLARAPQFVE 257 Query: 239 QNFMTEWH-----------YDQQLSQWNYMSDDS--------ASTMYIPLQEEEADYNAC 279 + + ++ ++D A T+ PL +E ++A Sbjct: 258 HLLVLDLDVPASGAAATGSFEGLEVHRRVLTDSPLAEYSPLAAPTISEPLSDEAEVWSAL 317 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V+ LRDYV KN F V G SGGIDSA+CAA+A DALG +NV + +P KY+S S +DA Sbjct: 318 VVGLRDYVHKNGFSTVTFGFSGGIDSAVCAALAADALGGDNVYGVSMPSKYSSSHSRDDA 377 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + A+ +G Y V PI D+V+ + + + + +G+ ENIQ+R+RG +LMALSN Sbjct: 378 SDLAERIGAHYRVEPIGDMVDVYVNQL------QLTGLAEENIQARVRGMLLMALSNLDG 431 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++L T NK+E++VGY T+YGD G F P+KDL+KT V+QLA WRN G P Sbjct: 432 HLVLATGNKTELAVGYSTIYGDAVGAFAPIKDLFKTHVWQLARWRNEEAAKRGETP---P 488 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + + K PSAELRP Q D +SLP Y +LDD++ VEN+ + + + ++ ET+ V Sbjct: 489 IPENSITKPPSAELRPDQKDSDSLPDYELLDDVLDDYVENDRGYADLIEAGFDPETIDRV 548 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 ++ +EYKRRQ P GTKIT K+FGRDR P++N +R+ S Sbjct: 549 VRMVDRAEYKRRQYPPGTKITFKAFGRDRRLPMTNGWRERKS 590 >gi|121604614|ref|YP_981943.1| NAD+ synthetase [Polaromonas naphthalenivorans CJ2] gi|120593583|gb|ABM37022.1| NAD+ synthetase [Polaromonas naphthalenivorans CJ2] Length = 565 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 225/573 (39%), Positives = 311/573 (54%), Gaps = 32/573 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 LKI +AQLN VGD+ GN K A A ++G L+L E+ I GY EDL + SFI Sbjct: 2 SLKICVAQLNYCVGDMPGNAQKIIAAARTAYQEGARLVLTPEMAICGYAAEDLFLRPSFI 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG------------VLNSVVILDAGNIIA 110 QAC A++ + + G +VVG P G N+ +L G +I Sbjct: 62 QACDDAVNQVARELAGLKGLTVVVGTPVHGDSGKGLRTKSVAVQQRQNAARVLREGRVIE 121 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRD-------IRLGILICEDIWKNSNICKHL 163 K LPNY F E+R F G + +G+LICED W + Sbjct: 122 TYAKRELPNYQVFDERRYFAPGQGTCVFQATGDEEGDEAVSIGLLICEDAW-FEEPARLA 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 ++ GAE L +NASP++ K +R ++ + LP++Y + VGGQDE++F+G SF Sbjct: 181 QQAGAELLVVINASPFHVGKGSEREVMMRERCLATGLPLVYAHLVGGQDEIVFEGHSFAL 240 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 LA + + F E F + Q + + + E ++A VL + Sbjct: 241 QADGALAGRAESFKENLFFAQAGRAQA-------AIELVADAVPLRSAEADLWDALVLGV 293 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F IIGLSGGIDSAL AIAVDALG + V+T+M+P YT+ S DA A Sbjct: 294 RDYLGKNGFPGAIIGLSGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDAREMA 353 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + + +YD + I F + ++ + ENIQ+RIRG LMALSN +++L Sbjct: 354 ERMKVRYDEISIVPEFEAFKASLAGEFKGRAEDTTEENIQARIRGVFLMALSNKFGSIVL 413 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++ GY TLYGDM+GGF +KDL KT VF+LA WRN + G IP Sbjct: 414 TTGNKSEMATGYCTLYGDMAGGFAVIKDLLKTTVFRLARWRNENDP---YGTGGSPIPER 470 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 I+ + PSAELR QTDQ+SLPPY +LD I+KR +EN++S + V V L+ Sbjct: 471 IITRPPSAELRADQTDQDSLPPYEVLDAILKRYMENDQSVEAVVAAGFERAVVERVARLI 530 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +EYKRRQAPVG +++ +SFG+D YPI++KF Sbjct: 531 RINEYKRRQAPVGIRVSHRSFGKDWRYPITSKF 563 >gi|254424253|ref|ZP_05037971.1| NAD synthase family [Synechococcus sp. PCC 7335] gi|196191742|gb|EDX86706.1| NAD synthase family [Synechococcus sp. PCC 7335] Length = 568 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 216/580 (37%), Positives = 318/580 (54%), Gaps = 39/580 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP VGD++GN + A +A G DL+L EL + GYPP DL+ + SFI Sbjct: 1 MKIAIAQINPTVGDLSGNAQRILEAAIQAADLGADLVLTPELSLCGYPPRDLLMRPSFIT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPR-------QDQEGVLNSVVILDAGNIIAVRDKINL 117 + L ++VG Q Q+ + NS+ +L +G + V K L Sbjct: 61 KTKRQAEALAKALP-SDLSVLVGIAEDNPSAAMQGQKPIFNSMALLQSGKVKEVFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIR----LGILICEDIWKNS----------NICKHL 163 P Y F E R F SG + + R +G+ ICED+W N N + L Sbjct: 120 PTYDVFDEDRYFESGTKASSFLLQAERESIHVGVTICEDLWNNETFWGKRTYSINPTQEL 179 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 + G + + +L+ASPY + K R +++ + I+YVNQVGG D+LIFDG S F Sbjct: 180 VENGVDLVVNLSASPYVYAKQVLREDMIAHEAKQHQRAIVYVNQVGGNDDLIFDGQSVAF 239 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 + Q +L + FS + + D+Q Q A L + ++A VL + Sbjct: 240 NRQGELVCRAAAFSTDLKLVNFDIDKQDLQ-------PAVIETTLLAADAEIWSALVLGV 292 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 +DY +K F K +IGLSGGIDSAL +AIA +ALG +NV +++P Y+S S+ DA A Sbjct: 293 KDYARKCGFRKAVIGLSGGIDSALVSAIAAEALGPQNVLGVLMPSPYSSKHSISDAEQLA 352 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 K +G + +PI L++ + + + S + EN+QSRIRGN+LMA+SN +LL Sbjct: 353 KNIGIPTETIPIGQLMSGYEKTLDDLFKGTESDVTEENLQSRIRGNLLMAVSNKFGHLLL 412 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GG + D+ KT+V+ + W N +IP + Sbjct: 413 TTGNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSICRWLNRKQA---------LIPNN 463 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLL 522 I+ K PSAEL+P Q DQ+SLP Y ILDDI++R+V+ ++S + + TV V L+ Sbjct: 464 IITKPPSAELKPGQVDQDSLPDYEILDDILERLVQKQQSADDIVAAGHPAATVEKVVRLV 523 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 SE+KRRQ P K+T ++FG PI++++ +S E Sbjct: 524 TRSEFKRRQTPPVLKVTDRAFGMGWRMPIASQWSLELSAE 563 >gi|262375848|ref|ZP_06069080.1| glutamine-dependent NAD+ synthetase [Acinetobacter lwoffii SH145] gi|262309451|gb|EEY90582.1| glutamine-dependent NAD+ synthetase [Acinetobacter lwoffii SH145] Length = 541 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 224/557 (40%), Positives = 326/557 (58%), Gaps = 21/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIAIAQ +P VG++ N K +A + DLI+F EL GYP EDL+ + S Sbjct: 1 MKSFKIAIAQFSPHVGNLDANTQKMIDLANQAKKDKADLIIFPELSTLGYPAEDLLIRPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 ++ +A + L T +V GF Q ++G NS ++ G ++ V +K LPNY Sbjct: 61 LVKRTKAAFEKL---TEVKDIVMVFGFVNQTEDGQRYNSAAVMKDGEVLGVYNKQVLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G+ + + + G+LICED+W + + L K + LNASPY Sbjct: 118 GVFDEKRYFGEGHQHLVFEYLGHKFGVLICEDVW-SLATVQQLAKLNIDTALVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R E + + +++ ++Y NQVGGQD+LIFDG SF + ++A Q F E Sbjct: 177 VGKPQHRIETMAALVKQLNINLVYCNQVGGQDDLIFDGTSFVLNKSGEVALQAPTFQENL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E++ +Q ++ + I Y + V++ RDYVQ++ F VI+GLS Sbjct: 237 TIAEFNAEQLQFSKGAIAPALDTMAEI--------YQSLVMATRDYVQRSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG + VQ +M+PY YT+ S+EDAAA AK +G + + I+ +V+ Sbjct: 289 GGIDSALTLAIAVDALGADKVQAVMMPYTYTAQISVEDAAAQAKNMGVTFGIAEINPVVS 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F ++ F P EN+Q+R RG +LMALSN ++L T NKSE++VGY TLYG Sbjct: 349 GFMQVLFPFFGNAPVDATEENLQARSRGTLLMALSNKFGNLVLATGNKSELAVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+ LKD+YKT VF+LA +RNS T VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGYAVLKDVYKTIVFELAKYRNSIS-------ETPVIPERVITRPPSAELRPDQVDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y ILD I+ +E + S + + ++ E V+ V L+ +EYKRRQ +G +I+ Sbjct: 462 DSLPAYDILDAILYSYIEEDMSQDDIITKGFDAEVVKKVIRLVDINEYKRRQGAIGPRIS 521 Query: 540 AKSFGRDRLYPISNKFR 556 ++S+GR+R YPI N ++ Sbjct: 522 SRSYGRERRYPIVNGWK 538 >gi|134098194|ref|YP_001103855.1| glutamine-dependent NAD(+) synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291009113|ref|ZP_06567086.1| glutamine-dependent NAD(+) synthetase [Saccharopolyspora erythraea NRRL 2338] gi|133910817|emb|CAM00930.1| glutamine-dependent NAD(+) synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 610 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 228/599 (38%), Positives = 325/599 (54%), Gaps = 52/599 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ+N VGDIAGN + EA +QG L+ F E ++GYP EDL +KS Sbjct: 18 MPQLRIALAQVNASVGDIAGNSSMVLDWTREAVQQGAHLVAFPETVLAGYPVEDLALRKS 77 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F A + +++L G G +VVG +D EGV NS +L G ++A DK +LP Sbjct: 78 FAAANRAEVESLAQRLQQAGCGDALVVVGHLDRDDEGVRNSASLLYDGRVVATYDKHHLP 137 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F E R F G+ + + +G++ICEDIW+N L + G + + +N+SP Sbjct: 138 NYGVFDEARYFAPGFDLPIVRLHGLDVGVVICEDIWQNGGPVSALGEVGVDLVVCINSSP 197 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K +R +V G+ + P+ YVN VGGQDEL+FDG S Q+ + F+E Sbjct: 198 YERAKDDQRTPLVAGRAAEAGAPMAYVNMVGGQDELVFDGDSMVVGTDGQVLARAPQFTE 257 Query: 239 QNFMTEWHYDQQLSQWNYMSDD-------------------------------------- 260 + + + + Sbjct: 258 HLLVLDMDLTAGGHTATTVPEPEVPAEGGMQFVPASRFLRPAFDITRTVLQADPLPGYEP 317 Query: 261 -SASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKE 319 A + PL +E + A V LRDYVQKN F V G SGGIDSA+CAA+ DA+G + Sbjct: 318 LPAQPLPEPLSDEAEVWAALVTGLRDYVQKNGFRSVTFGFSGGIDSAVCAALCADAIGAD 377 Query: 320 NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVA 379 ++ + +P Y+S S DAA A+ LGC +DV PI D+V+ F S + E SG+ Sbjct: 378 SLYGVSMPSHYSSEHSRSDAADLARRLGCHFDVQPIGDMVDVFVSRL------ELSGLAE 431 Query: 380 ENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQ 439 EN+Q+R RG LMALSN ++L NK+E++VGY T+YGD GGF P+KD+ KT V++ Sbjct: 432 ENVQARCRGVTLMALSNQHGHLVLAPGNKTELAVGYSTIYGDAVGGFAPIKDVPKTLVWK 491 Query: 440 LASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVEN 499 LA WRN+ G P IP + + K PSAELRP Q D +SLPPY ILD ++ VE Sbjct: 492 LAQWRNAEAEKRGEVP---PIPENSISKPPSAELRPDQVDTDSLPPYEILDVVLDGYVEG 548 Query: 500 EESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + + + + ++ V + L+ +EYKRRQ P GTKIT K+FGRDR P++N++R+ Sbjct: 549 DRGYADLVGEGFDAALVERIIQLVDRAEYKRRQYPPGTKITLKAFGRDRRLPVTNRWRE 607 >gi|126730056|ref|ZP_01745868.1| NAD synthetase [Sagittula stellata E-37] gi|126709436|gb|EBA08490.1| NAD synthetase [Sagittula stellata E-37] Length = 562 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 241/559 (43%), Positives = 339/559 (60%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGD+AGN AKAR A EE QG DL+ E+FI+GY +DL+ K Sbjct: 11 MTDRFRLTMAQLNPTVGDLAGNAAKARAAWEEGRAQGADLVALPEMFITGYQAQDLIVKP 70 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ A I+ L D G + +G P + + NS +L G + AV K LPN+ Sbjct: 71 AFVNAAVREIEALAKACAD-GPALAIGGPCPEGAKLHNSYYVLQGGKVAAVTHKYFLPNF 129 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F P+ +R+G+ +CED W ++ + +++ GAE L N SPY+ Sbjct: 130 NVFDEVRLFSRDQLQGPVSINGVRVGMPVCEDAW-YPDVVEAMEESGAEILVVPNGSPYF 188 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK + R + ++ LP+ Y+N VGGQD+ +FDG SF + + +LA Q+ F E Sbjct: 189 RNKYETRLNKMIARVVESGLPLAYLNMVGGQDDQVFDGGSFVMNPRARLAVQLPVFEEVT 248 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ + + + + + P E DYN VL+LRDY +K F KV++G+S Sbjct: 249 TTVDFVRGDEG-----WTAEEGTFVTHPD-AWEQDYNVMVLALRDYCRKTGFGKVLLGMS 302 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL A IAVDALG ENV+ +MLP +YTS SLEDA ACA ALGC+YD +PI + Sbjct: 303 GGVDSALVATIAVDALGAENVRCVMLPSEYTSEHSLEDAKACANALGCRYDFVPIGKGRD 362 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 363 AITETLAPLFEGTQPDLAEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 422 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ GP EVIP I+ K PSAELR Q D Sbjct: 423 DMAGGYNPIKDLYKTRVFETCRWRNANHRGWMKGPEGEVIPERIITKPPSAELRADQKDS 482 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP+LD I+ +V+ + + + Y+ E V+HLLY SEYKR Q+ G ++T Sbjct: 483 DSLPDYPVLDAILDILVDQDGAVSDCVAAGYSREDAMRVQHLLYISEYKRFQSAPGARLT 542 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 543 NRAFWLDRRYPIVNRWRDE 561 >gi|297617738|ref|YP_003702897.1| NAD+ synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297145575|gb|ADI02332.1| NAD+ synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 549 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 216/569 (37%), Positives = 318/569 (55%), Gaps = 38/569 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + + +AQLNPVVGDI GN+ K + + G+DL++F ELFI+GYPP DL+ K F++ Sbjct: 1 MIVGLAQLNPVVGDIEGNLKKIEDTLAQYSPCGVDLLIFPELFITGYPPRDLLEKPWFLK 60 Query: 65 ACSSAIDTLKSDT-HDGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLPN 119 ++ L+ + G GI++G P G+ N +++ G I K LP Sbjct: 61 KVEKSVTRLRQLSLRYPGTGILIGLPVPTDGTVGRGLYNGAILIYQGREIGRTAKTLLPI 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-----------ICKHLKKQGA 168 Y F E+R F + + F+ LG+ ICED W + + L KQGA Sbjct: 121 YDVFDEERYFDPAPRVETVPFKGEVLGVSICEDAWNDPELWPSRRMYSFDPIEALAKQGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +++ASP+ K + R+ ++ ++P IYVNQVGG DEL+FDG S F+ + + Sbjct: 181 TLLVNISASPFTVGKEEIRYRLIRNHARRHNIPFIYVNQVGGNDELVFDGRSMAFNRRGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 L + F E+ + + ++ + +Y ++ + A VL RDY++ Sbjct: 241 LLYLGAPFKEEIGIIDTE------------KETDTFLYSSQDRIQSVFEALVLGTRDYLK 288 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K F K +IGLSGGIDSA+ IAV+ALG+ENV I +P Y+S S+ D+ A LG Sbjct: 289 KCGFKKAVIGLSGGIDSAVTCCIAVEALGRENVLGISMPSPYSSAGSVTDSQKLASNLGI 348 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 ++ V+PI + + ++ FL+ I EN+Q+RIRGNILMA +N ++L+T NK Sbjct: 349 QFLVIPITQVFESYLTIFDGFLEGRRLDIAEENLQARIRGNILMAFANRFGYLVLSTGNK 408 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++VGY TLYGDMSGG + L D+ KT V+ LA + N E+IP I+ K+ Sbjct: 409 SELAVGYCTLYGDMSGGLSVLADVPKTMVYDLAGYINRS---------KEIIPLEIIHKA 459 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEY 527 PSAELRP QTDQ++LPPYP+LD I+ VE Q +++TV+ V + SEY Sbjct: 460 PSAELRPGQTDQDTLPPYPLLDQILYLYVEENLGVEEIVQLGLDEDTVKKVVRSVNASEY 519 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKFR 556 KRRQA G K+T+K+FG R PI+ + Sbjct: 520 KRRQAAPGLKVTSKAFGMGRRMPIAARIE 548 >gi|297182590|gb|ADI18749.1| NAD synthase [uncultured gamma proteobacterium HF4000_36I10] Length = 538 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 230/557 (41%), Positives = 320/557 (57%), Gaps = 23/557 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + IA+AQ+NPVVGDI GN K ++A EA +G L +F EL ++GYPPEDL+ + Sbjct: 1 MGADVTIAMAQINPVVGDIVGNTEKIQQAAREAAAKGAQLAMFPELALTGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A+ L +++ D ++VG P + N +L G + A+ K LPNY Sbjct: 61 SLRIRVDEALRQLAAESTD--IALLVGLPLHADGKLYNGAALLRGGKVEALYRKHRLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F +G + GI ICEDIW + GA+ + +LNASPY+ Sbjct: 119 RVFDEMRYFAAGSEASVFELDGVSFGITICEDIW-SPEPAAKAVAAGADLILNLNASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K ++R +V + ++P++YVNQVG QDEL+FDG SF L + SE Sbjct: 178 VGKQREREAVVAERCRENNVPVLYVNQVGAQDELVFDGGSFALSSDGSLKARAHAVSETL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + A + E Y+A V+ +RDY+ KN F V++GLS Sbjct: 238 SLITL----------RDGEPLAGEVQPLGDELATIYDALVVGVRDYINKNGFKGVVLGLS 287 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG E V+ +M+P+KYTS SLEDA A A LG Y V+ I + Sbjct: 288 GGIDSALTLAIAVDALGAERVEAVMMPFKYTSGMSLEDAEAEANTLGVSYKVISIEPMYE 347 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + P ENIQSRIRG +LMA+SN +++LTT NKSE++VGY TLYG Sbjct: 348 AFSEALREEFAGLPVDKTEENIQSRIRGGLLMAISNKKGSLVLTTGNKSEMAVGYATLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+ K +VF L+ +RNS L+ VIP ++++ PSAEL P Q D+ Sbjct: 408 DMCGGFAVLKDVSKQRVFALSEYRNS---------LSPVIPQRVIDRPPSAELAPDQKDE 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ +E+++S + E V V L+ +EYKRRQA +GT+IT Sbjct: 459 DSLPPYEVLDQILEHYIEHDQSAEAIIAMGFEREAVGQVVRLVDINEYKRRQAAIGTRIT 518 Query: 540 AKSFGRDRLYPISNKFR 556 + FGRDR YPI+N+++ Sbjct: 519 ERGFGRDRRYPITNRWQ 535 >gi|120611780|ref|YP_971458.1| NAD+ synthetase [Acidovorax citrulli AAC00-1] gi|120590244|gb|ABM33684.1| NAD+ synthetase [Acidovorax citrulli AAC00-1] Length = 550 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 218/556 (39%), Positives = 311/556 (55%), Gaps = 17/556 (3%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQ N +VGD+ GN K A EA+ QG L+L EL + GY EDL + +F+ AC Sbjct: 5 ISIAQFNFIVGDVEGNARKIISAAHEAHAQGAALLLTPELALCGYAAEDLFLRPAFLDAC 64 Query: 67 SSAIDTLKSDTHD-GGAGIVVGFPRQ----DQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 A+ + T G +VVG P + E N+ +L G + K LPNY+ Sbjct: 65 DRALQDIAQATAACGDLAVVVGHPWRSVAGGAERCHNAASVLRGGRVEQTYAKQELPNYA 124 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E+R F G + +R+G+LICED W + + +LNASP++ Sbjct: 125 VFDEQRYFDPGTQPCVFDVQGVRVGLLICEDAWFPGPAARAAQAGAQLL-ATLNASPFHL 183 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R +I+ +++ LP++Y + VGGQDE++F+G SF D + + F+E Sbjct: 184 GKSAEREQIMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALDATGFVGVRAPGFAEALV 243 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + + ++ + E ++A VL +RDYV KN F V++GLSG Sbjct: 244 RVVARAEDGVLRFE-------PDVAPIPAPEADLWSALVLGVRDYVGKNGFPGVLLGLSG 296 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL AIAVDALG + V+ +M+P YT+ S DA A+ LG +YD + I Sbjct: 297 GIDSALVLAIAVDALGPDKVRAVMMPSPYTADISWIDARDMAERLGVRYDEIAIAPQFEA 356 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + ++ EN+Q+RIRG +LMALSN +++LTT NKSE++ GY TLYGD Sbjct: 357 FKAALASEFAGRAEDATEENLQARIRGTLLMALSNKFGSVVLTTGNKSEMATGYCTLYGD 416 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF +KD+ KT V+ LA WRN+H G IP I+ + PSAELRP Q DQ+ Sbjct: 417 MAGGFAVIKDVAKTTVYGLARWRNAHDP---FGTGASPIPERIITRPPSAELRPDQKDQD 473 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LD I+ R +EN+E + Y V V L+ +EYKRRQ+PVG ++T Sbjct: 474 SLPPYDVLDAIVGRYMENDEPIESIIAAGYARADVERVTRLIQVNEYKRRQSPVGIRVTR 533 Query: 541 KSFGRDRLYPISNKFR 556 +SFG+D YPI+N+FR Sbjct: 534 RSFGKDWRYPITNRFR 549 >gi|326391022|ref|ZP_08212571.1| NAD+ synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325992967|gb|EGD51410.1| NAD+ synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 543 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 222/564 (39%), Positives = 322/564 (57%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINTAKYQKADLVVFPELATVGYPPKDFLFMQDFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-QEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A I+ + G+++G RQD + + NS + G I+ V DK LPNY F Sbjct: 61 ANEKYINEIV-LPATYQIGVILGTVRQDTEGNLYNSAFFIYDGKIVEVFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEFLFS 173 EKR F F+ I+LG+ ICEDIWK+ ++ + K + + Sbjct: 120 DEKRYFKPAQIRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQFKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPYY K R E++ +I +P +YVNQVG DELIFDG+SF + + + Q+ Sbjct: 180 ISASPYYLGKQNMRVEMIEKKIKKYAIPFVYVNQVGANDELIFDGSSFVVNEEGKRVVQL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + + + + + +D + YNA V+ +RDY +K+ F Sbjct: 240 KAFEEDIKIVDMEELKNFKELPEIKEDIS-----------WVYNALVVGVRDYCKKSGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A+ LG ++ V+ Sbjct: 289 KAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKTDARILAENLGVEFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE+++ Sbjct: 349 PIEPVFKSYLSVFNGD-NSVIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDMSG P+ D+ KT V++LA + N E+IP SI+EK PSAEL Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYELARYINRE---------REIIPISIIEKVPSAEL 458 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP+Q D++SLPPY ILD+I+K +E S ++ Y++ V+ V + + EYKR+QA Sbjct: 459 RPNQKDEDSLPPYKILDEILKMYIEENRSAKEIIEKGYDERLVKDVINKVNRVEYKRKQA 518 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 G K+T K+FG R PI + F+ Sbjct: 519 APGLKVTTKAFGTGRRMPIVHNFK 542 >gi|86139281|ref|ZP_01057851.1| NAD(+) synthase [Roseobacter sp. MED193] gi|85824125|gb|EAQ44330.1| NAD(+) synthase [Roseobacter sp. MED193] Length = 552 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 244/558 (43%), Positives = 343/558 (61%), Gaps = 9/558 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQ+NP VGD+AGN AKAR A E DL+ E+F++GY +DLV K Sbjct: 1 MADRFRVTLAQMNPTVGDLAGNAAKARTAWAEGRAASADLVALPEMFLTGYNTQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F QA +A + L D D G + +G P + + N+ +IL G I + K +LPN Sbjct: 61 VFQQAAMAAAEQLALDCAD-GPALAIGCPWAEGGKLYNAYLILKDGKIASRCLKHHLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F +G P D R+G ICED W + ++ + L++ GAEFL N SPYY Sbjct: 120 TVFDEVRIFDAGPLGGPYAVGDTRIGSPICEDGW-HEDVAETLEETGAEFLLIPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 NK++ R + + LP+IY+N VGGQD+ +FDG +F + LA QM F E Sbjct: 179 RNKMEVRQNHMVARAVETGLPVIYLNLVGGQDDQVFDGGTFVLNPNGALALQMPVFDEA- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 +T+ + W + D A + E DY V SLRDY+ K F K ++GLS Sbjct: 238 -VTQLDLHRTPEGWRAVEGDKAHLPDV----WEQDYRTMVESLRDYMGKTGFKKALLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSA+ AAIAVDA+G ENV+ +MLP +YTS +SL+DA A A+ALG YD +PI + + Sbjct: 293 GGVDSAIVAAIAVDAIGAENVRCVMLPSEYTSRESLDDAEAVAEALGVHYDYVPIAEGRD 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITNTLAPLFNGREEDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN++ +GP EVI P++++K PSAELR Q D Sbjct: 413 DMNGGYNPIKDLYKTRVFETCRWRNANHRPWMMGPAGEVIRPNVIDKPPSAELRDDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD I++ +V+ E S + + + ETV+ VEHL+Y SEYKR Q+ G +++ Sbjct: 473 DSLPDYPELDAILEILVDQEGSVADCVAKGFARETVKRVEHLIYISEYKRFQSAPGARLS 532 Query: 540 AKSFGRDRLYPISNKFRD 557 ++F DR YPI N+FRD Sbjct: 533 PRAFWLDRRYPIVNRFRD 550 >gi|92112628|ref|YP_572556.1| NH(3)-dependent NAD(+) synthetase [Chromohalobacter salexigens DSM 3043] gi|91795718|gb|ABE57857.1| NH(3)-dependent NAD(+) synthetase [Chromohalobacter salexigens DSM 3043] Length = 543 Score = 590 bits (1522), Expect = e-166, Method: Composition-based stats. Identities = 237/556 (42%), Positives = 318/556 (57%), Gaps = 19/556 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFKK 60 ++ L + +AQL+P+VGDI GN A+A A EA D+++F ELF++GYPPEDL+F++ Sbjct: 1 MQDLTLVMAQLDPLVGDIPGNTAQAIEAVREARIEHRADVVVFPELFLTGYPPEDLLFRE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S A + + +++G+P + + N +L G + K LPNY Sbjct: 61 SMESRLEQAREQMARKVA-RDVMVIIGYPGKRDGRLHNLAGVLYDGEWLGEYAKQALPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F G S I R RLG+LICED+W + + GA+ + +LNASPY+ Sbjct: 120 QVFDEQRYFAPGASPLVIEHRGARLGVLICEDLWDGGPVARS-VDAGADIVVTLNASPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +K +R + + V P++Y+NQVGGQDEL+FDG S D Q+A + F E Sbjct: 179 RDKPLERERLFAERARAVTRPVVYLNQVGGQDELVFDGGSLVLDASGQVAVRAP-FWEVG 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 M D A L EE+ Y A V LRDYV KN F V++GLS Sbjct: 238 LMPVRFTDASGGWQP-----EAGECEPLLSSEESLYCALVTGLRDYVNKNRFQGVVLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG E VQ +M+PY YT+ S DAAA A+ LG Y+V+PI +V Sbjct: 293 GGIDSALSLAIAVDALGPERVQAVMMPYHYTADISKADAAAQAELLGVHYEVMPIAPMVE 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + EN+QSR RG +LMALSN M+L+T NKSE++VGY TLYG Sbjct: 353 AFTDTLRESFAGTERDTTEENLQSRCRGVLLMALSNKKGLMVLSTGNKSEMAVGYATLYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+N LKD+YKT V++LA WRN+ IP ++ + PSAEL P Q D Sbjct: 413 DMVGGYNALKDVYKTWVYRLAKWRNAQAPA---------IPERVITRPPSAELAPDQADS 463 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y LD I++R +E + S D + E V V L+ SEYKRRQAPVG ++T Sbjct: 464 DSLPAYDELDAILERYIEGDMSAEAIIDAGFASEDVYKVVKLVDRSEYKRRQAPVGVRVT 523 Query: 540 AKSFGRDRLYPISNKF 555 + FGRDR YPI N + Sbjct: 524 VRGFGRDRRYPIVNGW 539 >gi|119505580|ref|ZP_01627651.1| NAD synthase [marine gamma proteobacterium HTCC2080] gi|119458523|gb|EAW39627.1| NAD synthase [marine gamma proteobacterium HTCC2080] Length = 536 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 221/550 (40%), Positives = 321/550 (58%), Gaps = 18/550 (3%) Query: 11 QLNPVVGDIAGNIAKARRAREEANRQGMD-LILFTELFISGYPPEDLVFKKSFIQACSSA 69 Q+N VGD GN + A A+ + +D +++F EL ++GYPPEDL+ + S Q + Sbjct: 3 QINTFVGDWQGNCERVLAACRSAHAKFIDAVVVFPELTLTGYPPEDLLLRPSLEQETDAV 62 Query: 70 IDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTF 129 + L ++ ++VG+PR+ +G+ NS ++ G I+A DK +LPNY F EKR F Sbjct: 63 LAQLCAELPPT-LWVIVGYPRRRTDGLYNSAGVIHDGKIVAEYDKQSLPNYQVFDEKRYF 121 Query: 130 ISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHE 189 G + +++GI ICEDIW+ + GA+ L +LNASP++ K +R Sbjct: 122 QEGTGACVVDISGVKVGITICEDIWEP-EPIAGARAAGAQLLINLNASPFHRGKPLQRQA 180 Query: 190 IVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQ 249 +V + LP++YVNQVGGQDEL+FDG SF + +A F E W + Sbjct: 181 MVAERARANDLPVVYVNQVGGQDELVFDGGSFAVNRDGAVAVSAVDFDEAL---SWLKVE 237 Query: 250 QLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 S + + A + A + A VL ++DYV KN F V++GLSGGIDSA+ Sbjct: 238 ASSLGDVKIGEGAKAEA--RDDVAAVWQALVLGVKDYVNKNGFPGVVLGLSGGIDSAVTL 295 Query: 310 AIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+AVDALG E V +M+P++YT+ S+EDA A A A+G Y + I L F +++ Sbjct: 296 AVAVDALGAERVNAVMMPFRYTASISIEDAQAQAAAMGVAYRSISIEPLYESFNGALAEE 355 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 + I EN+Q+R RG +LM++SN ++LTT NKSE++VGY TLYGDM+GGF+ L Sbjct: 356 FEGLAPNITEENMQARCRGVLLMSISNKKNLLVLTTGNKSELAVGYSTLYGDMAGGFDAL 415 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPIL 489 KD K V+ LA +RN+ L+ IP ++ + PSAEL P Q D++SLPPY +L Sbjct: 416 KDCPKMLVYALARYRNT---------LSSCIPERVITRPPSAELAPDQKDEDSLPPYEVL 466 Query: 490 DDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRL 548 D II+ VE + S + Q + ++ VR V L+ +EYKRRQAPVG +IT + FGRDR Sbjct: 467 DAIIEHYVEQDLSASDIIAQGFAEDDVRRVLRLIDLNEYKRRQAPVGVRITQRGFGRDRR 526 Query: 549 YPISNKFRDH 558 YPI+ +R Sbjct: 527 YPITWAWRSR 536 >gi|254284409|ref|ZP_04959377.1| NAD+ synthetase [gamma proteobacterium NOR51-B] gi|219680612|gb|EED36961.1| NAD+ synthetase [gamma proteobacterium NOR51-B] Length = 537 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 221/554 (39%), Positives = 321/554 (57%), Gaps = 19/554 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMD-LILFTELFISGYPPEDLVFKKSFI 63 +K+ +AQ+N +VGD GN + EA + +++F EL + GYPPEDL+ + S Sbjct: 1 MKLCMAQINTMVGDYRGNTEQVLATCAEAVAIDPEAIVVFPELTLCGYPPEDLLLRPSVE 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + ++ L + +++GFPR + + N+ +++ G IIA DK LPNY+ F Sbjct: 61 DHVNECLERLCRELP-ASLWVILGFPRHREGRLFNTAAVINRGAIIAEYDKQRLPNYAVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F +G + + +G+ ICEDIW ++ GA L +LN+SPY+ K Sbjct: 120 DEVRYFSAGNDPCVVEVAGMPVGLSICEDIWSPV-PAASARQAGARLLVNLNSSPYHRGK 178 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +R ++ + H PI+YVNQVGGQDEL+FDG SF D ++ F + Sbjct: 179 RDQRWSLLADRARENHFPIVYVNQVGGQDELVFDGGSFAVDAAGEVVCAAPDFDAGLWWL 238 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 E Y + + T+ PLQE EA + A VL LRDYV KN F V++GLSGGI Sbjct: 239 ELGY------QDATVAITPDTVATPLQEIEAVWRALVLGLRDYVDKNGFPGVVLGLSGGI 292 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSA+ A+AVDALG + V +M+P++YT+ S+EDA A A LG Y + I + F Sbjct: 293 DSAVTLALAVDALGADRVHAVMMPFRYTASISIEDAEAEALTLGVDYRSISIEPIYEAFM 352 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + +S+ I EN+Q+R RG +LM++SN ++LTT NKSE++VGY TLYGDM+ Sbjct: 353 ASLSEEFAGLLPNITEENLQARCRGVLLMSISNKKNLLVLTTGNKSELAVGYSTLYGDMA 412 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD K V+ LA +RNS + VIP ++ + PSAEL P Q D++SL Sbjct: 413 GGFDVLKDCPKMLVYALARFRNS---------VGPVIPERVITRPPSAELAPDQKDEDSL 463 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 P Y +LD II+ VE + + I + + + VR V L+ +EYKRRQAPVG +I+ ++ Sbjct: 464 PAYEVLDQIIELYVEQDLTAIEIISRGFEEPDVRRVIRLVDLNEYKRRQAPVGVRISQRA 523 Query: 543 FGRDRLYPISNKFR 556 FGRDR YPI+ +R Sbjct: 524 FGRDRRYPITWAWR 537 >gi|82703650|ref|YP_413216.1| NAD+ synthetase [Nitrosospira multiformis ATCC 25196] gi|82411715|gb|ABB75824.1| NAD+ synthetase [Nitrosospira multiformis ATCC 25196] Length = 538 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 221/559 (39%), Positives = 316/559 (56%), Gaps = 27/559 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQ+N VGD+ GN K +A G L++ EL +SGYPPEDL+ + F Sbjct: 1 MKLAIAQINCTVGDLGGNTRKILDYANQAKNAGARLVVTPELALSGYPPEDLLLRHGFRH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A+ L G +VVG P + + N+ ++ G IIA K LPN S F Sbjct: 61 ACQNALTELAG--KTGDITVVVGHPHLAADKLYNAASVIRNGKIIATYLKNLLPNDSVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G+ IR I IC+DIW+ + K+ GAE L LNASPY+ NK Sbjct: 119 ERRYFEPGFRPCVFELDGIRFAINICQDIWQEGS-ATRAKEGGAEVLLVLNASPYHMNKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R+++ +I L I+Y N +GGQDELIFDGASF + + + Q E M E Sbjct: 178 ALRYDLARKRIDETGLSIVYANLIGGQDELIFDGASFAMNARGDVTHQFDALVEALGMVE 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + + E Y A L ++DY+ KN V++GLSGG+D Sbjct: 238 LE----------GAAPVTTEIAPLESLEANVYKALCLGVKDYIGKNRIPGVLLGLSGGVD 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL IA DALG + V+ +M+P ++T+ SL DA A+ LG +Y PI + F Sbjct: 288 SALTMTIAADALGADKVKAVMMPSRFTADMSLLDARTMAQTLGVRYTEFPIEPVFGEFKD 347 Query: 365 LMSQFLQEEPS----GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 +++ P + EN+Q+RIRG +LMALSN S A++L T NKSE +VGY TLYG Sbjct: 348 TLAKEFAALPPSDVPDLTEENLQARIRGTLLMALSNKSGAIVLITGNKSETAVGYSTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 D +GGF LKD+ KT V++L +RN + +VIP +L ++PSAELRP QTDQ Sbjct: 408 DTAGGFAVLKDVTKTMVYKLCQYRNG---------VGKVIPDRVLSRAPSAELRPDQTDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ VE++ S + Y++ R V L+ +EYKRRQ+P G ++T Sbjct: 459 DSLPPYAVLDAILEEYVEHDMSLEEILRMGYDERDARRVVQLIRQNEYKRRQSPPGIRVT 518 Query: 540 AKSFGRDRLYPISNKFRDH 558 +++FG+D YPI+ +++D Sbjct: 519 SRAFGKDWRYPITARYQDQ 537 >gi|269794840|ref|YP_003314295.1| NAD+ synthetase [Sanguibacter keddieii DSM 10542] gi|269097025|gb|ACZ21461.1| NAD+ synthetase [Sanguibacter keddieii DSM 10542] Length = 553 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 210/568 (36%), Positives = 312/568 (54%), Gaps = 28/568 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++IA+AQ++ VGD+ N A +G ++ F E+ I+GYP EDL + S Sbjct: 1 MVDIRIALAQIDTCVGDVDTNSRTILEWSRRAAAEGAQVVAFPEMTITGYPIEDLALRAS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IV---VGFPRQD----QEGVLNSVVILDAGNIIAV 111 F +A +A+ T+ G G +V VG P+ N ++L G + A Sbjct: 61 FQRAARAAVQTIADQLVADGLGDLTVVLGTVGAPQVTRTSPGTRPTNQALVLQGGAVTAS 120 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 DK +LPNY F E R F G + + R+G+++CEDIW++ L Q + L Sbjct: 121 YDKHHLPNYGVFDEFRIFAPGAEPCVLEIQGRRVGLVVCEDIWQDGGPVAELAAQEVDLL 180 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 LN SP+ K R ++ + + P+ YVN VGGQD+L+FDG SF + Sbjct: 181 LVLNGSPFEEGKGHSRTDLAVRRARELRAPVAYVNMVGGQDDLVFDGGSFVVGEDGSVLT 240 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F E + + D + + PL +E Y A V +R YV+KN Sbjct: 241 SAPQFVEHLLVWDLAADG--------EPEHRGPIAPPLDPDEEVYQAIVTGVRGYVRKNG 292 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F V++GLSGGIDSAL AAI DA+G +NV + +P Y+S S +DA AK +G Y Sbjct: 293 FRSVVLGLSGGIDSALVAAICADAIGGDNVYGVSMPSTYSSEHSKDDALDLAKRIGAHYR 352 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V PI +V+ F + + + AEN+Q+R+RG ILM LSN ++L T NKSE+ Sbjct: 353 VQPIAPMVDAFQGEL------DLQDVAAENLQARVRGMILMGLSNSEGHLVLATGNKSEL 406 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGD GGF P+KD+ K+QV+ L+ WRN+ + +G P IP S + K PSA Sbjct: 407 AVGYSTIYGDAVGGFAPIKDVDKSQVWALSRWRNNVALDAGQIP---PIPESSITKPPSA 463 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRR 530 ELRP Q DQ+SLPPY +LD+++ +E+ E + +++E V V L+ +E+KRR Sbjct: 464 ELRPGQVDQDSLPPYDLLDEVLDAYIEHAEGRAELLARGFDEEVVDKVVSLVDRAEWKRR 523 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFRDH 558 Q P+G K+TA +FGRDR P+++++R+ Sbjct: 524 QYPLGPKVTALAFGRDRRLPVTSRWREP 551 >gi|88707054|ref|ZP_01104750.1| glutamine-dependent NAD+ synthetase [Congregibacter litoralis KT71] gi|88698704|gb|EAQ95827.1| glutamine-dependent NAD+ synthetase [Congregibacter litoralis KT71] Length = 540 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 215/554 (38%), Positives = 316/554 (57%), Gaps = 19/554 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + I +AQ+N VGD GN + +A Q +++F EL +SGYPPEDL+ + + Sbjct: 1 MHILMAQINTQVGDFTGNADQVIEVATQACEEQDSPVVVFPELTLSGYPPEDLLLRPALC 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + AI L + A ++VG+P + + + N + G + A K LPNY F Sbjct: 61 KRVNDAIIRLHRELPPQ-AWVIVGYPIRREGLLYNCAGVFHDGELKAEYRKNELPNYQVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F +G + + R+G+ ICEDIW S GAE L +LNASP++ K Sbjct: 120 DEKRYFTAGSEPCVLEIQGTRVGLSICEDIWV-SGPSAAAATAGAELLINLNASPFHRGK 178 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 ++R +++ + +L +YVNQVGGQDEL+FDG SF + +L Q F + Sbjct: 179 QQERLDLLARRCRDNNLAAVYVNQVGGQDELVFDGGSFAMNSDGKLVAQSPRFETASNWC 238 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 EW + S + L + A + A VL +RDYV KN F V++GLSGG+ Sbjct: 239 EW------TDSGSASGFREGVLSEALDDMAAVWQALVLGMRDYVNKNGFPSVVLGLSGGV 292 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A+AVDALG V+ +M+P++YTS S+ DAA + LG ++ V+ I + F Sbjct: 293 DSALTLAVAVDALGASRVEAVMMPFRYTSDISIADAAEQSATLGVRHSVISIEPIYESFL 352 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN+Q+R RG +LM++SN ++++LTT NKSE++VGY TLYGDM+ Sbjct: 353 AALKDEFAGLDADTTEENLQARCRGVLLMSISNKKRSLVLTTGNKSELAVGYSTLYGDMA 412 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+ KT V+ L +RNS L+ IP ++E+ PSAEL P Q D++SL Sbjct: 413 GGFDVLKDVPKTLVYALCRYRNS---------LSPCIPERVIERPPSAELAPDQKDEDSL 463 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD I++ VE + S + E V L+ +EYKRRQAP+G +IT + Sbjct: 464 PPYDVLDRILELYVEQDFSAEAIIAEGIPREDVERAVRLVDLNEYKRRQAPIGVRITQRG 523 Query: 543 FGRDRLYPISNKFR 556 FGRDR YPI++ +R Sbjct: 524 FGRDRRYPITSAWR 537 >gi|114797585|ref|YP_761267.1| glutamine-dependent NAD(+) synthetase [Hyphomonas neptunium ATCC 15444] gi|114737759|gb|ABI75884.1| glutamine-dependent NAD(+) synthetase [Hyphomonas neptunium ATCC 15444] Length = 555 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 251/560 (44%), Positives = 335/560 (59%), Gaps = 12/560 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L+I AQLNPVVGDI GN+A AR A EA +G L++ +E F+ GYP EDLV K Sbjct: 4 MSNNLRILAAQLNPVVGDIKGNLALAREAYGEARAKGAHLLVLSEHFLLGYPAEDLVLKP 63 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S ++ A+ L +T D G I++G P ++ + NS L G I A DK LPNY Sbjct: 64 SAVEQSMDAVRALAQETKD-GPAILIGTPWSEEGRLYNSACFLGGGLIKARYDKRELPNY 122 Query: 121 SEFHEKRTFISGYSND-PIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F EKR + G + +R+G+ ICEDIW GAE L NASP+ Sbjct: 123 GVFDEKRHYTPGEGPPLVVELHGVRVGVAICEDIWLERVPRATHA-AGAELLIVPNASPW 181 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG-QQQLAFQMKHFSE 238 +R + + + LP ++VNQ+GGQDEL+FDGASF +G + + F Sbjct: 182 RRAIQAERANAF-DRWADLKLPYLFVNQMGGQDELVFDGASFATNGTHGERCGLVGQFET 240 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + E+ + L+ A+Y A + L DYV+KN F V++G Sbjct: 241 GTALVEFD------PSTKQFSGLGQSCAADLEGWPAEYRAAMQGLGDYVRKNRFPGVVLG 294 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 +SGGIDSA+ AAIA DALG + V +M+P KYTS SLEDA ACA+ALGC+YD + IH Sbjct: 295 MSGGIDSAITAAIAADALGPDKVWCVMMPSKYTSNDSLEDAKACAQALGCRYDTINIHPG 354 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V +++ + + I ENIQSR+R LMALSN M++TT NKSE++VGY TL Sbjct: 355 VEALDTMLGDVFAGKKADITEENIQSRLRAVTLMALSNKFGQMVVTTGNKSEMAVGYATL 414 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG+N LKD YKT+VF+L+ WRN+ L P EVIP I+ K PSAELR Q Sbjct: 415 YGDMCGGYNALKDFYKTEVFELSKWRNAVHPKDALAPAGEVIPERIITKPPSAELREDQK 474 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D++SLPPY +LDDI++ +V+ EE + + ++ TVR +EHL+Y +EYKRRQAP G K Sbjct: 475 DEDSLPPYEVLDDILRGLVDLEEDVDDILARGHDAATVRRIEHLVYIAEYKRRQAPPGVK 534 Query: 538 ITAKSFGRDRLYPISNKFRD 557 + K+FGRDR YPI+N+FRD Sbjct: 535 VGGKNFGRDRRYPITNRFRD 554 >gi|21243946|ref|NP_643528.1| NAD synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|21109556|gb|AAM38064.1| NH3-dependent NAD synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 546 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 222/560 (39%), Positives = 315/560 (56%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N + A + D++LF EL ISGYPPEDL+ + Sbjct: 1 MSQTLRIAMAQFDFPVGGVAQNTDRIIEYIAAARDEFEADIVLFPELAISGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C A+ + + T G VVG+P+ V N+ +L G I A K LPN Sbjct: 61 PGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F N + + +R+G++ICED+W + + + GAE + NAS Sbjct: 119 YAVFDERRYFDVDPDGENCVVTVKGVRVGVVICEDLW-FAEPLANTVRAGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG + F Sbjct: 178 PYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFV 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + ++ ++ DD +M + A V L+DY +KN F KV + Sbjct: 238 DQWLVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCRKNGFSKVWL 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 292 GLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETIAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T Sbjct: 352 AFEGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +Q Sbjct: 412 IYGDMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRDNQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Q+ G Sbjct: 465 TDQDSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRHQSAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPI+N +R Sbjct: 525 KVSRRAFGRERRYPITNGYR 544 >gi|126724772|ref|ZP_01740615.1| NAD synthetase [Rhodobacterales bacterium HTCC2150] gi|126705936|gb|EBA05026.1| NAD synthetase [Rhodobacterales bacterium HTCC2150] Length = 552 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 233/559 (41%), Positives = 322/559 (57%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K +I +AQLNP +GD+ N KAR A D + E+F++GY +DL + Sbjct: 1 MAEKFRITLAQLNPTLGDLTQNATKAREAWAAGKAANADFVALPEMFLTGYQLQDLAMRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ + + L +D D G + +G P N +IL G I K +LP Sbjct: 61 AFLADVADVLKGLAADVAD-GPALGIGAPMIVDGKRHNCYLILQNGEIATQVLKHHLPID 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F SG + P +R+G ICED W + ++ + + GAE LF N SPY Sbjct: 120 DVFDEARIFASGDVSGPYRIGPLRIGSPICEDAWFD-DVTETHAESGAEILFVPNGSPYM 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ ++ LP+IY+N VGGQD+ +FDGASF + LA QMK E Sbjct: 179 RAKQDHRIALMVARVVETGLPLIYLNLVGGQDDQVFDGASFALNRGGALAAQMKTLDEDI 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + E E DYN V +LRDY+ K F KV++G+S Sbjct: 239 CHLDLELGDEGWTIKQGPLEPRP------DEYEQDYNVMVTALRDYMGKTGFKKVLLGMS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A IAVDALG ENV+ +MLP +YTS SLEDA A+ALG + D LPI Sbjct: 293 GGIDSALVATIAVDALGPENVRCVMLPSEYTSSHSLEDAEKAARALGVRMDTLPIAGPRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 353 AVTEALAPLFEGTKPDLTEENIQSRLRGLMLMALSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYK +VFQ WRN + LGP EVIP I++K PSAELR Q D+ Sbjct: 413 DMAGGYNPIKDLYKMRVFQTCRWRNENHRDWMLGPQAEVIPQRIIDKPPSAELRDDQKDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++ +V+ + S + ++ ETV+ +EHL+Y SE+KR Q+ G ++T Sbjct: 473 DSLPPYEVLDAILEMLVDQDFSVADVVAAGFDRETVKRIEHLIYISEHKRFQSAPGARLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD+ Sbjct: 533 GRAFWLDRRYPIVNRWRDN 551 >gi|166713131|ref|ZP_02244338.1| NAD synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 546 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 225/560 (40%), Positives = 312/560 (55%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG + N + A + D++LF EL ISGYPPEDL+ + Sbjct: 1 MSQTLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFEADIVLFPELAISGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C A+ + + T G VVG+P+ V N+ +L G I A K LPN Sbjct: 61 PGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIAATYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F N + + +++G++ICED+W + K GAE + NAS Sbjct: 119 YAVFDERRYFDVDPDGENCVVTVKGVQVGVVICEDLW-FPEPLANTVKAGAEVVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG + F Sbjct: 178 PYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGSVHPAAAAFV 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + ++ + DD +M + A V L+DY +KN F KV + Sbjct: 238 DQWLVVDYAAQARRFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCRKNGFGKVWL 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + AA ALG K + + I Sbjct: 292 GLSGGIDSALVLAMAVDALGSDNVTAVRLPSRYTAGLSNDLAAEQCDALGVKLETVAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + I EN+QSR RG ILMALSN +LLTT NKSE +VGY T Sbjct: 352 AFEGLLAALGPLFAGTEPDITEENLQSRSRGVILMALSNKFGGLLLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +Q Sbjct: 412 IYGDMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRDNQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ R V+ E+S + Y ETV +V L+ +E+KR QA G Sbjct: 465 TDQDSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAAETVEHVLRLVRLNEWKRHQAAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPI+N +R Sbjct: 525 KVSRRAFGRERRYPITNGYR 544 >gi|303257762|ref|ZP_07343774.1| NAD+ synthetase [Burkholderiales bacterium 1_1_47] gi|331001199|ref|ZP_08324826.1| NAD+ synthase [Parasutterella excrementihominis YIT 11859] gi|302859732|gb|EFL82811.1| NAD+ synthetase [Burkholderiales bacterium 1_1_47] gi|329569131|gb|EGG50923.1| NAD+ synthase [Parasutterella excrementihominis YIT 11859] Length = 540 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 212/559 (37%), Positives = 316/559 (56%), Gaps = 23/559 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M++K+ +++AQLN GD+ GN + A E+A + D+++ EL + GYPPEDL+F Sbjct: 1 MIEKVVVSMAQLNQTAGDLEGNFKRIAEAAEKA--KHSDILVTPELSLCGYPPEDLLFLD 58 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 SF++ C+ ++ L T I+ G+P ++ + N V ++ G I+ K NLPN Sbjct: 59 SFLEDCAKKLNELVEYSTRFPKLHILAGYPLKEAGRLYNVVSVILNGKILLTYRKKNLPN 118 Query: 120 YSEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 Y F E+R F G D R G+ ICEDIW + K+QGA+ L NASP Sbjct: 119 YGVFDEERYFTPGGEDVCTFDVGDTRFGVNICEDIWFPEAPSQ-AKEQGAQVLLIANASP 177 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + K ++R +V ++ + + YVN G QDE++FDG +F + L + H E Sbjct: 178 FEEGKEEQRLNMVRRHVNAIGMDACYVNMCGAQDEIVFDGETFACSADEVL-ARAPHMKE 236 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 E + + PL + Y A V+S+RDY+ KN F V++G Sbjct: 237 SLLSVEVRKGRICRGEDSQ----------PLSDWAVLYEALVVSMRDYINKNGFKGVVLG 286 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGG+DSAL IAVDA+G + V +M+P YTS S DAA A LG + + + I D Sbjct: 287 LSGGVDSALVLKIAVDAVGNDKVLAVMMPSVYTSSLSRGDAAKLASRLGVRLETISIQDG 346 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F ++++ P + EN+Q+RIRG ILMA+SN +M+ TT NKSE++VGY TL Sbjct: 347 YTAFEFMLAKQFNGMPHDVTEENLQARIRGVILMAISNKFGSMVATTGNKSEMAVGYSTL 406 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGD++GGF +KD+YKTQV+ L W N + V P +IL ++PSAELR +Q Sbjct: 407 YGDLAGGFAVIKDVYKTQVYALCRWINECSKEN------PVFPETILTRAPSAELRENQK 460 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLP Y +LD+I++R +E+ E ++ V V ++ +EYKRRQ+P+G K Sbjct: 461 DQDSLPDYSVLDEILRRFIEDREGPEEIVAAGFDRAVVDKVLRMVSRAEYKRRQSPIGPK 520 Query: 538 ITAKSFGRDRLYPISNKFR 556 +T +FGRD +P++NK+R Sbjct: 521 VTKVAFGRDWRFPVTNKYR 539 >gi|207723618|ref|YP_002254016.1| nh3-dependent nad+ synthetase protein [Ralstonia solanacearum MolK2] gi|206588821|emb|CAQ35783.1| nh3-dependent nad+ synthetase protein [Ralstonia solanacearum MolK2] Length = 546 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 222/562 (39%), Positives = 319/562 (56%), Gaps = 31/562 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNAARILAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLGAT 64 Query: 67 SSAIDTL-KSDTHDGGAGIVVGFPRQDQE---------GVLNSVVILDAGNIIAVRDKIN 116 S A+D L G +++G P+ E N+ + G + K+ Sbjct: 65 SRALDALVAELAAFPGLHVLIGHPQLSFEAPAPGSALPKPTNTATVAVDGRTLGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPN F EKR F +G R G++ICED W K GAE + NA Sbjct: 125 LPNNEVFDEKRYFQAGCEPFVFEVEGTRFGVIICEDAWYPQATA-WAKTAGAEVVLIPNA 183 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + +M F Sbjct: 184 SPYHLDKEDLREQIIGARVKESGLPHVYVNLVGGQDELVFDGGSFVLDAHGKPVARMAQF 243 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 +E + + + E Y A L +RDY+ KN F I Sbjct: 244 AEGVGYVRFD----------GARPQPGEIAQEATLEAQVYEALKLGVRDYIGKNGFPGAI 293 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 IGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD +PI Sbjct: 294 IGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAVRLGVRYDEIPIM 353 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + F ++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE++VGY Sbjct: 354 PMFDAFRGALADEFRNLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVGYC 413 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR + Sbjct: 414 TLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELREN 464 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLP Y LD I++R +E + + + + V+ + LL +EYKRRQAPVG Sbjct: 465 QTDQDSLPEYAALDAIVQRYMEQNQPVADIIAAGFAEADVQKIVRLLKINEYKRRQAPVG 524 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 ++T ++FGRD YPI+++F++ Sbjct: 525 IRVTQRAFGRDWRYPITSRFKE 546 >gi|303246918|ref|ZP_07333194.1| NAD+ synthetase [Desulfovibrio fructosovorans JJ] gi|302491625|gb|EFL51508.1| NAD+ synthetase [Desulfovibrio fructosovorans JJ] Length = 580 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 209/583 (35%), Positives = 301/583 (51%), Gaps = 39/583 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++A+ Q+NP VGD+ GN+AK ++A R G DL++F E+ + GYPPEDL+ K Sbjct: 1 MAAFRLALCQINPTVGDVGGNVAKVLAGLDQARRIGADLVVFPEMVVPGYPPEDLLLKSD 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+ AC + + G V G P + + ++N+ ++ G I + K LPNY Sbjct: 61 FVDACMAGARRIAGQAR--GLTAVFGCPWFEDD-LVNAAIVAHDGEIAGITAKRYLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F +G + G+ +CEDIW G A L +++ASPY+ Sbjct: 118 VFDENRYFATGRGSAVYDRDGFVFGVSVCEDIWYPGGPPAEQAHGGGARLLVNISASPYH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R +++ + S + Y N VGGQDEL+FDG S F L + K F+E Sbjct: 178 RGKGAGRERMLSTRASDNSAYVAYANMVGGQDELVFDGHSVVFGPDGGLVARGKQFAEDM 237 Query: 241 FMTEWH---------YDQQLSQWNYMSDDSASTMYIPL------------------QEEE 273 + + D + +W + + +P + Sbjct: 238 VVCDLDPGQPRRQRLLDPRCRKWEPELEHRPRRISLPHVADAVRAPLDAPAMPPLLDDVA 297 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A VL DYV+K+ F V IGLSGGIDS+L A IA DALG ENV + +P +Y+S Sbjct: 298 EVYEALVLCTGDYVRKSGFGGVCIGLSGGIDSSLTAVIAADALGPENVFGVAMPTRYSSD 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 SLEDA A+ LG + V+ I ++ F +S + P + EN+Q RIRG +LMA Sbjct: 358 DSLEDAKELAEKLGITFHVVAIEEIFKAFLGTLSPLFGDRPFDVTEENLQPRIRGTLLMA 417 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN ++LTT NKSE+ VGY TLYGD +GGF+ +KD+ KT V+ L+ WRN Sbjct: 418 LSNKFGRLVLTTGNKSEVGVGYSTLYGDTAGGFSVIKDVPKTLVYALSRWRNERAG---- 473 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE-SFINNDQEYND 512 T+++P +L K P+AELRP Q D +SLP Y LD ++ VE + Sbjct: 474 ---TDLVPARVLVKPPTAELRPDQKDSDSLPEYDALDPVLAAYVERGLCPAAMKAAGMDA 530 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V V L+ +EYKRRQ+P G KIT ++FG+D PI N++ Sbjct: 531 AVVDRVTRLVDRNEYKRRQSPPGPKITPRAFGKDWRLPIVNRY 573 >gi|294666976|ref|ZP_06732205.1| NAD + synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603265|gb|EFF46687.1| NAD + synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 546 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 222/560 (39%), Positives = 315/560 (56%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG + N + A + D++LF EL ISGYPPEDL+ + Sbjct: 1 MSQTLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFEADIVLFPELAISGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C A+ + + TH G VVG+P+ V N+ +L G I A K LPN Sbjct: 61 PGFLAHCEQALARIAAATH--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F N + + +R+G++ICED+W + + + GAE + NAS Sbjct: 119 YAVFDERRYFDVDPDGENCVVTVKGVRVGVVICEDLW-FAEPLANTVRAGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG + F Sbjct: 178 PYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFV 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + ++ ++ DD +M + A V L+DY +KN F KV + Sbjct: 238 DQWLVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCRKNGFSKVWL 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 292 GLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETIAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T Sbjct: 352 AFEGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +Q Sbjct: 412 IYGDMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRDNQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Q+ G Sbjct: 465 TDQDSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRHQSAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPI+N +R Sbjct: 525 KVSRRAFGRERRYPITNGYR 544 >gi|83749198|ref|ZP_00946200.1| Glutamine-dependent NAD(+) synthetase [Ralstonia solanacearum UW551] gi|207742674|ref|YP_002259066.1| nh3-dependent nad+ synthetase protein [Ralstonia solanacearum IPO1609] gi|83724139|gb|EAP71315.1| Glutamine-dependent NAD(+) synthetase [Ralstonia solanacearum UW551] gi|206594068|emb|CAQ60995.1| nh3-dependent nad+ synthetase protein [Ralstonia solanacearum IPO1609] Length = 546 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 222/562 (39%), Positives = 319/562 (56%), Gaps = 31/562 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNAARILAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLGAT 64 Query: 67 SSAIDTL-KSDTHDGGAGIVVGFPRQDQE---------GVLNSVVILDAGNIIAVRDKIN 116 S A+D L G +++G P+ E N+ + G + K+ Sbjct: 65 SRALDALVAELAAFPGLHVLIGHPQLSFEAPAPGSALPKPTNTATVAVDGRTLGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPN F EKR F +G R G++ICED W K GAE + NA Sbjct: 125 LPNNEVFDEKRYFQAGCEPFVFEVEGTRFGVIICEDAWYPQATA-WAKTAGAEVVLIPNA 183 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R +I+ + LP +YVN VGGQDEL+FDG SF D + +M F Sbjct: 184 SPYHLDKEDLREQIIGARAKESGLPHVYVNLVGGQDELVFDGGSFALDAHGKPVARMAQF 243 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 +E + + + E Y A L +RDY+ KN F I Sbjct: 244 AEGVGYVRFD----------GARPQPGEIAQEATLEAQVYEALKLGVRDYIGKNGFPGAI 293 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 IGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD +PI Sbjct: 294 IGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAVRLGVRYDEIPIM 353 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + F ++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE++VGY Sbjct: 354 PMFDAFRGALADEFRNLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVGYC 413 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR + Sbjct: 414 TLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELREN 464 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLP Y LD I++R +E + ++ + + V+ + LL +EYKRRQAPVG Sbjct: 465 QTDQDSLPEYAALDAIVQRYMEQNQPVVDIIAAGFAEADVQKIVRLLKINEYKRRQAPVG 524 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 ++T ++FGRD YPI+++F++ Sbjct: 525 IRVTQRAFGRDWRYPITSRFKE 546 >gi|326404377|ref|YP_004284459.1| NAD(+) synthetase [Acidiphilium multivorum AIU301] gi|325051239|dbj|BAJ81577.1| NAD(+) synthetase [Acidiphilium multivorum AIU301] Length = 554 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 262/561 (46%), Positives = 345/561 (61%), Gaps = 8/561 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L +AIAQL+ VG I N+A R AR EA R+G DL++ EL I+GYPPEDLV K Sbjct: 1 MTDTLTLAIAQLDLHVGAIDRNLAAIRAARAEAARRGADLLVTPELGIAGYPPEDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ AC +A L +DT DGG G++VG P + + + N+ +LD G IIA R K LPNY Sbjct: 61 AFVAACEAAAAELAADTADGGPGVIVGLPWRAEGALHNAAFVLDGGRIIARRAKHELPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + P++FR RLG++ICED W + + + L + GAE L S+N SP+ Sbjct: 121 GVFDEKRVFAPGPAPGPVMFRGFRLGVMICEDWWLPA-VSETLAETGAELLISINGSPFE 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP ++ GGQDE++FDGASF + + LA +M HF Sbjct: 180 DGKLGVRLQLALNRVVETGLPFVFAAMTGGQDEIVFDGASFALNADRSLALRMPHFRAAI 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 W + + + + Y A V+ L DYV KN F VI+GLS Sbjct: 240 ETLVW------KRTTTGLVAEPHVLPPEPERLDLVYRAMVMGLADYVNKNGFPGVILGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+AVDALG V+ +M+P +YTS SLEDAAACA LG + D +PI Sbjct: 294 GGIDSALSAAVAVDALGPARVRAVMMPSRYTSAHSLEDAAACADLLGIRCDTVPIGGATE 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +++ + I ENIQSR RG ILMALSN M+LTT NKSE+SVGY TLYG Sbjct: 354 AFAAVLEPLYEGRTPDITEENIQSRARGLILMALSNKLGHMVLTTGNKSEMSVGYATLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG++ LKD+YKT VF L+ WRN++ LGP V+P ++ K PSAELR +QTDQ Sbjct: 414 DMCGGYSVLKDVYKTTVFALSHWRNANRPADALGPAGAVMPERVITKPPSAELRENQTDQ 473 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD +++ +VE E+S ++ TV V LL +EYKRRQAP G KIT Sbjct: 474 DSLPPYDVLDAVLEGLVEGEKSIEELVAAGHDRATVARVWKLLDRAEYKRRQAPPGVKIT 533 Query: 540 AKSFGRDRLYPISNKFRDHIS 560 A++FGRDR YPI+N F + Sbjct: 534 ARAFGRDRRYPITNGFTRLVG 554 >gi|297172743|gb|ADI23709.1| NAD synthase [uncultured Oceanospirillales bacterium HF4000_21D01] Length = 556 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 232/559 (41%), Positives = 332/559 (59%), Gaps = 11/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M ++L++ +AQLN +VGDI GN + + E A + DLI+F EL ++ YPPEDL+ + Sbjct: 1 MARQLRVVMAQLNLMVGDIEGNTSLVLKNAERAISEFAADLIVFPELTLTAYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 S AID + D IV+GFP + N++ +L+ GN +A K LPN Sbjct: 61 PSLKLRIDRAIDAILQ--ADLPIHIVLGFPESIDGKLFNALTVLEGGNRLATYHKQCLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F E+R F +G + IRLG ICED+W+ + K GA+ + ++NASPY Sbjct: 119 YQVFDERRYFHAGDKPCVLQIAGIRLGFTICEDMWE-QDPFKQAGDAGADLMININASPY 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + +KL++R ++ + PIIYVN VGGQDEL+FDGAS + + +F Sbjct: 178 HIHKLEQRQALLKQRSIEGGFPIIYVNLVGGQDELVFDGASMAMSASGECHYLAPNFEAD 237 Query: 240 NFMTEWHYDQQLSQWNY--MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 + SQ + ++ + Y+A VL +RDYV KN F ++ Sbjct: 238 LHLVNVDILNSDSQEFAAKRCEIPRQSLAAEQSSIASVYHALVLGVRDYVNKNKFVGTVL 297 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIAVDALGK+ VQ +M+P++YTS SL+ AA A++L +Y V+PI Sbjct: 298 GLSGGIDSALTLAIAVDALGKDRVQAVMMPFEYTSKLSLDSAAEQAQSLAVEYQVIPIRH 357 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + F + P + +NIQ+R RG ILMA+SN + M+LTT NKSE +VGY T Sbjct: 358 IYAAFIEALEHEFAGMPVDVSEQNIQARCRGVILMAISNKKQLMVLTTGNKSECAVGYST 417 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 LYGDM+GGF+ LKD+ KT V+QLA++RN+ + G VIP ++++ PSAEL P+Q Sbjct: 418 LYGDMAGGFDVLKDVSKTLVYQLAAYRNTEYGSQGEA----VIPQQVIDRPPSAELAPNQ 473 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+SLPPY LD I++ +EN+ S + Y +E V+ V L+ +EYKRRQ+PVG Sbjct: 474 LDQDSLPPYDDLDRILELYIENDYSADAIVAEGYAEEVVKKVLRLVDLNEYKRRQSPVGV 533 Query: 537 KITAKSFGRDRLYPISNKF 555 ++T + FGRDR YPI+N + Sbjct: 534 RLTPRGFGRDRRYPITNAW 552 >gi|160903300|ref|YP_001568881.1| NAD+ synthetase [Petrotoga mobilis SJ95] gi|160360944|gb|ABX32558.1| NAD+ synthetase [Petrotoga mobilis SJ95] Length = 575 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 210/579 (36%), Positives = 326/579 (56%), Gaps = 35/579 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 K++I++AQ+N VGD GN+ K + +A+ +G D+ILF EL ++GYPPEDL+ K F+ Sbjct: 2 KIRISLAQMNSTVGDYPGNVEKIKDFISKADEKGADIILFPELSLNGYPPEDLILKTQFL 61 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + +I+ ++ + IV+G D E NS ++ G I K+ LPNYS F Sbjct: 62 KDSLKSIEEIQDFSKSKDVVIVLGAVDWDVES-YNSAFVIYKGEIYGSYKKMFLPNYSVF 120 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 EKR F +G + + I++GI ICED+W + L + GA + +L++SP+Y + Sbjct: 121 DEKRYFTAGRAPFLMEMERIKIGITICEDLWVPNGPAVSLAQNGANLILNLSSSPFYKGR 180 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 K R E++ + S + I Y N +GGQDEL+FDG S + ++ F E + Sbjct: 181 NKVRFEMLKTRASELSSWIAYCNIIGGQDELVFDGGSVVINPYGEIELSAPSFEEGLYFI 240 Query: 244 EWH-------------------------YDQQLSQWNYMSDDSASTMYIPLQEEEAD-YN 277 + + + + + + Y Sbjct: 241 DIDPLEPTRANLREGKRKHYNQSAYYESVNTIKIEKKIREKTPIKAVKVDSFDIYEQLYL 300 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A ++DYV KN F KV++GLSGGIDS+L AAIA DA+G ENV +++P +Y+S S++ Sbjct: 301 AVKTGIKDYVLKNGFQKVVLGLSGGIDSSLTAAIAADAIGPENVVGLLMPSQYSSKGSID 360 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 D+ +K LG Y ++PI+D+ + + + + ENIQ+RIRGN++MA SN Sbjct: 361 DSIELSKNLGINYKIIPINDIYEKYIENLKESFKNTDEDKTEENIQARIRGNLVMAFSNK 420 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 + L NKSE + GY TLYGDM+GGF+P+KDLYKT ++++A N Sbjct: 421 FGYLALACGNKSEAATGYATLYGDMAGGFSPIKDLYKTDLYKVARKYNELHG-------K 473 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQE-YNDETVR 516 E+I SILEK+PSAELRP+Q D++ LPPY +LD+I+ + ++ E S+ QE Y++ ++ Sbjct: 474 EIIIKSILEKAPSAELRPNQKDEDILPPYALLDEILFKYIDREMSYDELLQEGYDEGLLK 533 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V +++ +EYKRRQ+ G K+T +SFG+DR PI+NK+ Sbjct: 534 NVINMVNKNEYKRRQSAPGIKLTERSFGKDRRMPITNKY 572 >gi|325922862|ref|ZP_08184586.1| DNA-directed RNA polymerase, subunit H [Xanthomonas gardneri ATCC 19865] gi|325546655|gb|EGD17785.1| DNA-directed RNA polymerase, subunit H [Xanthomonas gardneri ATCC 19865] Length = 546 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 220/560 (39%), Positives = 316/560 (56%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N + A + G D++LF EL ISGYPPEDL+ + Sbjct: 1 MSQTLRIAMAQFDFPVGAVARNTDRIIEFIAAARDEFGADIVLFPELAISGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C A+ + ++T G VVG+P+ V N+ +L G+I A K LPN Sbjct: 61 PGFLAHCEEALARIAANTR--GIVAVVGWPQSAGSVVYNAASVLRDGSIAATYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F N + + +++G++ICED+W + + GAE + NAS Sbjct: 119 YAVFDERRYFDVDPDGDNCVVTVKGVQVGVVICEDLW-FAEPLAGTVQAGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS D + F Sbjct: 178 PYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADADGTVHPAAAAFV 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + ++ ++ DD +M + A V L+DY +KN F KV + Sbjct: 238 DQWLVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCRKNGFTKVWL 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 292 GLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETIAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + + EN+QSR RG ILMALSN +LLTT NKSE +VGY T Sbjct: 352 AFEGLLAALGPLFEGTQPDVTEENLQSRSRGVILMALSNKFGGLLLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +Q Sbjct: 412 IYGDMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRDNQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Q+ G Sbjct: 465 TDQDSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRHQSAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPI+N + Sbjct: 525 KVSRRAFGRERRYPITNGYS 544 >gi|148260979|ref|YP_001235106.1| NAD synthetase [Acidiphilium cryptum JF-5] gi|146402660|gb|ABQ31187.1| NH(3)-dependent NAD(+) synthetase [Acidiphilium cryptum JF-5] Length = 583 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 262/561 (46%), Positives = 345/561 (61%), Gaps = 8/561 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L +AIAQL+ VG I N+A R AR EA R+G DL++ EL I+GYPPEDLV K Sbjct: 30 MTDTLTLAIAQLDLHVGAIDRNLAAIRAARAEAARRGADLLVTPELGIAGYPPEDLVLKP 89 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ AC +A L +DT DGG G++VG P + + + N+ +LD G IIA R K LPNY Sbjct: 90 AFVAACEAAAAELAADTADGGPGVIVGLPWRAEGALHNAAFVLDGGRIIARRAKHELPNY 149 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + P++FR RLG++ICED W + + + L + GAE L S+N SP+ Sbjct: 150 GVFDEKRVFAPGPAPGPVMFRGFRLGVMICEDWWLPA-VSETLAETGAELLVSINGSPFE 208 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ ++ LP ++ GGQDE++FDGASF + + LA +M HF Sbjct: 209 DGKLGVRLQLALNRVVETGLPFVFAAMTGGQDEIVFDGASFALNADRSLALRMPHFRAAI 268 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 W + + + + Y A V+ L DYV KN F VI+GLS Sbjct: 269 ETLVW------KRTTTGLVAEPHVLPPEPERLDLVYRAMVMGLADYVNKNGFPGVILGLS 322 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+AVDALG V+ +M+P +YTS SLEDAAACA LG + D +PI Sbjct: 323 GGIDSALSAAVAVDALGPARVRAVMMPSRYTSAHSLEDAAACADLLGIRCDTVPIGGATE 382 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +++ + I ENIQSR RG ILMALSN M+LTT NKSE+SVGY TLYG Sbjct: 383 AFAAVLEPLYEGRTPDITEENIQSRARGLILMALSNKLGHMVLTTGNKSEMSVGYATLYG 442 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG++ LKD+YKT VF L+ WRN++ LGP V+P ++ K PSAELR +QTDQ Sbjct: 443 DMCGGYSVLKDVYKTTVFALSHWRNANRPADALGPAGAVMPERVITKPPSAELRENQTDQ 502 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD +++ +VE E+S ++ TV V LL +EYKRRQAP G KIT Sbjct: 503 DSLPPYDVLDAVLEGLVEGEKSIEELVAAGHDRATVARVWKLLDRAEYKRRQAPPGVKIT 562 Query: 540 AKSFGRDRLYPISNKFRDHIS 560 A++FGRDR YPI+N F + Sbjct: 563 ARAFGRDRRYPITNGFTRLVG 583 >gi|241764805|ref|ZP_04762812.1| NAD+ synthetase [Acidovorax delafieldii 2AN] gi|241365682|gb|EER60394.1| NAD+ synthetase [Acidovorax delafieldii 2AN] Length = 552 Score = 588 bits (1516), Expect = e-165, Method: Composition-based stats. Identities = 225/564 (39%), Positives = 320/564 (56%), Gaps = 21/564 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+ I AQLN VVGD+ GN K A +A+ QG L+L EL + GY EDL + Sbjct: 1 MM--FSICTAQLNFVVGDMPGNAQKIIAAARQAHAQGARLLLTPELAVCGYAAEDLFLRP 58 Query: 61 SFIQACSSAIDTLKSDTHDG-GAGIVVGFPRQD------QEGVLNSVVILDAGNIIAVRD 113 +F+ AC A+ T+ +T G IV+G P++ LN+ +L G + Sbjct: 59 AFMAACDDAVKTVARETAGLNGLVIVLGHPQKRTPADPAFSACLNAASVLRHGKVEQTYA 118 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 K LPNY F E+R F++G S +++G+LICED W S + + GA+ L Sbjct: 119 KHELPNYQVFDERRYFVAGQSPCVFDVEGVKVGLLICEDAW-FSEPARAAAQAGAQLLAV 177 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP++ K +R + + +++ LP++Y + VGGQDE++F+G SF + +A + Sbjct: 178 INASPFHLGKSAEREQTMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALNADGSVAARA 237 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F E+ + Q + + S ++A VL +RDYV KN F Sbjct: 238 PGFQEKLVFAQIGRAQDAIKIEAEIEPERSLE-------ADLWDALVLGVRDYVGKNGFP 290 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 ++GLSGGIDSAL AIAVDALG + V+T+M+P YT+ S DA A +G +YD + Sbjct: 291 GALLGLSGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAARMGVRYDEI 350 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I F + ++ P EN+Q+RIRG +LMALSN A++LTT NKSE++ Sbjct: 351 SIAPQFEAFKAALASEFAGLPEDTTEENLQARIRGTLLMALSNKFGAIVLTTGNKSEMAT 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDM+GGF P+KD+ KT+VF LA WRN++ G IP I+ + PSAEL Sbjct: 411 GYCTLYGDMAGGFAPIKDVAKTRVFALARWRNANDP---YGTGASPIPERIITRPPSAEL 467 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP Q DQ+SLP Y +LD I+ R +EN+E + Y V V L+ +EYKRRQA Sbjct: 468 RPDQKDQDSLPAYEVLDAIVARYMENDEPIESIIAAGYERADVERVTRLIKLNEYKRRQA 527 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 PVG ++T +SFG+D YPI++KFR Sbjct: 528 PVGVRVTRRSFGKDWRYPITSKFR 551 >gi|218437297|ref|YP_002375626.1| NAD synthetase [Cyanothece sp. PCC 7424] gi|218170025|gb|ACK68758.1| NAD+ synthetase [Cyanothece sp. PCC 7424] Length = 560 Score = 588 bits (1516), Expect = e-165, Method: Composition-based stats. Identities = 219/576 (38%), Positives = 324/576 (56%), Gaps = 42/576 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP+VGDI GN A + A QG L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQLNPIVGDIEGNAKTILEAAQTAFNQGARLLLTPELSLCGYPPRDLLLNPSFVK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPR-------QDQEGVLNSVVILDAGNIIAVRDKINL 117 + S ++ L ++VG + ++ + NS+ L+ I + K L Sbjct: 61 SMSIELEKLAQQIPPE-LAVLVGTVDLNPNAASRGEKPLYNSIAFLEQNQIQQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYS-------NDPIVFRDIRLGILICEDIWKNSN----------IC 160 P Y F E R F SG P +++G+ ICED+W + Sbjct: 120 PTYDVFDEDRYFESGRESHAFKIFPSPQASNFVKVGVTICEDLWNDEEFWGKRNYEASPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L + +F+ +L+ASPY NK K R ++ ++ +PIIY NQVGG D+LIFDG S Sbjct: 180 EDLAQLEVDFVVNLSASPYSVNKQKLRESMLLHSVTKYKVPIIYNNQVGGNDDLIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F ++ Q ++ + K F + ++ ++Q A+ +P +EE ++A V Sbjct: 240 FAYNRQGEICCRAKSFETDLILLDFSEEKQDFL-------PATIHPLPKTQEEEIFSALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DY K F KV++GLSGGIDS+L A IAV A+GK+NV +++P Y+S S+ DA Sbjct: 293 LGLKDYAYKCGFTKVVLGLSGGIDSSLVATIAVKAMGKDNVLGVLMPSPYSSEHSITDAE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A K L K LPI + + ++ SGI ENIQSRIRGN+LMA++N Sbjct: 353 ALVKNLEIKSYQLPIAPAMKVYDQILDPLFAGTQSGIAEENIQSRIRGNLLMAIANKFGY 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF + W N H E+I Sbjct: 413 LLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTEVFSICHWLNRHE---------EII 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVE 519 P +L K PSAEL+P Q DQ+SLPPY ILDDI+ R++ + +S + ++ +TV+ V Sbjct: 464 PHHVLIKPPSAELKPGQLDQDSLPPYEILDDILARMIHHHQSISEIVNTGHDLDTVKKVM 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ +E+KR+QAP G KIT ++FG PI++++ Sbjct: 524 KMVMRAEFKRKQAPPGLKITDRAFGTGWRMPIASRW 559 >gi|89900489|ref|YP_522960.1| NAD+ synthetase [Rhodoferax ferrireducens T118] gi|89345226|gb|ABD69429.1| NAD+ synthetase [Rhodoferax ferrireducens T118] Length = 561 Score = 588 bits (1516), Expect = e-165, Method: Composition-based stats. Identities = 228/570 (40%), Positives = 320/570 (56%), Gaps = 28/570 (4%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 LK+ +AQL+ VVGD+AGN K + A G+ L+L EL I GY EDL + +FI Sbjct: 2 TLKLCVAQLDFVVGDMAGNAKKIIESARSAYADGVRLLLTPELSICGYAAEDLFLRAAFI 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG--------VLNSVVILDAGNIIAVRDK 114 AC A+ T+ + +VVG P N+ +L G +IA K Sbjct: 62 AACDDAVKTVARELAGLKDMSVVVGHPTGGDSRTRSVAVSRRHNAASVLREGAVIATYAK 121 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRD-------IRLGILICEDIWKNSNICKHLKKQG 167 LPNY F E+R F G+ + I++G+LICED W + + G Sbjct: 122 RELPNYQVFDERRYFTPGHDVCVFEAGEADKMGQKIKVGLLICEDAW-FEAPARQTQAAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 AE L +NASP++ K +R +++ ++ LP++Y + VGGQDE++F+G SF + Sbjct: 181 AELLVVINASPFHVGKGDEREQMMRERVRACGLPLVYAHLVGGQDEVVFEGRSFALNANG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++A + F + + + Y + A+ + + ++A VL +RDY+ Sbjct: 241 EVAARAPSFIQNELVIQVSRA-------YEAIYLAADIAPERSLDADLWDALVLGVRDYI 293 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 KN F V++GLSGGIDSAL A+AVDALGK+ V+TIM+P YT+ S DA A LG Sbjct: 294 GKNGFPSVLLGLSGGIDSALVLAVAVDALGKDRVRTIMMPSPYTADISWIDARDMAARLG 353 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 +YD + I F ++ Q ENIQ+RIRG +LMALSN +++LTT N Sbjct: 354 VRYDEISIVPEFEAFKKSLAGEFQGLAEDTTEENIQARIRGTLLMALSNKFGSIVLTTGN 413 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++ GY TLYGDM+GGF +KDL KT VF+LA WRN H G IP I+ + Sbjct: 414 KSEMATGYCTLYGDMAGGFAVIKDLAKTTVFRLARWRNEHDP---YGTGQAPIPERIITR 470 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSE 526 PSAELRP+QTDQ+SLP Y +LD I++R +EN++S + V V L+ +E Sbjct: 471 PPSAELRPNQTDQDSLPAYEVLDAILERYMENDQSIEEIIAAGFARLDVEKVTRLIKINE 530 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 YKRRQAPVG ++T +SFG+D YPISNKFR Sbjct: 531 YKRRQAPVGIRVTHRSFGKDWRYPISNKFR 560 >gi|294625816|ref|ZP_06704433.1| NAD + synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599891|gb|EFF44011.1| NAD + synthase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 546 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 222/560 (39%), Positives = 314/560 (56%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG + N + A + D++LF EL ISGYPPEDL+ + Sbjct: 1 MSQTLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFEADIVLFPELAISGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C A+ + + TH G VVG+P+ V N+ +L G I A K LPN Sbjct: 61 PGFLAHCEQALARIAAATH--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F N + + +R+G++ICED+W + + + GAE + NAS Sbjct: 119 YAVFDERRYFDVDPDGENCVVTVKGVRVGVVICEDLW-FAEPLANTVRAGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG + F Sbjct: 178 PYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFV 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + ++ ++ DD +M + A V L+DY KN F KV + Sbjct: 238 DQWLVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCHKNGFSKVWL 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 292 GLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETIAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T Sbjct: 352 AFEGLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +Q Sbjct: 412 IYGDMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRDNQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Q+ G Sbjct: 465 TDQDSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRHQSAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPI+N +R Sbjct: 525 KVSRRAFGRERRYPITNGYR 544 >gi|262369416|ref|ZP_06062744.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315484|gb|EEY96523.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 541 Score = 587 bits (1513), Expect = e-165, Method: Composition-based stats. Identities = 222/557 (39%), Positives = 324/557 (58%), Gaps = 21/557 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K KIA+AQ +P +G++ N K EA +Q DLI+F EL GYP EDL+ + S Sbjct: 1 MKSFKIALAQFSPHIGNLEANAQKMLEQANEAKKQNADLIIFPELSSIGYPAEDLLLRPS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNY 120 + + LK+ +V GF Q ++G N+ ++ G ++ V +K NLPNY Sbjct: 61 LTKRTQQVFEQLKTV---KDIVMVFGFVNQTEDGQRYNAAAVMKDGQVLGVYNKQNLPNY 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F G+ + + + G+LICED+W + + + L + E LNASPY Sbjct: 118 SVFDEKRYFTEGHQHLVFEYLGHKFGVLICEDVW-SLSTVQQLAQLNVETALVLNASPYE 176 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R E ++ ++L ++Y NQVGGQD+LIFDG SF + Q + F E Sbjct: 177 VGKPQHRVETMSALAKQMNLNLVYANQVGGQDDLIFDGTSFVIAKNGSIVLQAESFKESL 236 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E+ +QQ + N + + I Y + V++ RDYVQ++ F VI+GLS Sbjct: 237 YFAEYEAEQQAFKANALPPALDTMAEI--------YQSLVMATRDYVQRSGFPGVILGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G + VQ +M+PY YT+ S+EDAA AK++G + + I+ +VN Sbjct: 289 GGIDSALTLAIAADAIGADKVQAVMMPYTYTAQISVEDAAEQAKSMGVTFGIAEINPIVN 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + F P+ EN+Q+R RG +LM LSN ++L+T NKSE++VGY TLYG Sbjct: 349 SFMQTLYPFFGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELAVGYCTLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GGF LKD+YKT VF+LA +RNS VIP ++ + PSAELRP Q DQ Sbjct: 409 DMVGGFAVLKDVYKTIVFELAKYRNSISD-------KPVIPERVITRPPSAELRPDQKDQ 461 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I+ +E + S + + ++ E V V L+ +EYKRRQ +G +I+ Sbjct: 462 DSLPPYDVLDAILYAYIEEDMSQDDIIAKGFDAEVVAKVIRLVDFNEYKRRQGAIGPRIS 521 Query: 540 AKSFGRDRLYPISNKFR 556 +++F R+R YPI N ++ Sbjct: 522 SRAFSRERRYPIMNGWK 538 >gi|108805552|ref|YP_645489.1| NH(3)-dependent NAD(+) synthetase [Rubrobacter xylanophilus DSM 9941] gi|108766795|gb|ABG05677.1| NH(3)-dependent NAD(+) synthetase [Rubrobacter xylanophilus DSM 9941] Length = 577 Score = 587 bits (1513), Expect = e-165, Method: Composition-based stats. Identities = 216/580 (37%), Positives = 319/580 (55%), Gaps = 36/580 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+N VGDI GN + E A R G +L+ F EL ++GYPPEDL+ + F+ Sbjct: 1 MRVALAQINTTVGDIWGNAERVSGTLERALRGGAELVAFPELALTGYPPEDLLLRPGFVH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++ + + + GA VGF + + N+ ++ G ++ K LPNY F Sbjct: 61 DNLAALEEVAARVPE-GAVAAVGFVDLGTD-LFNACAVISGGRVLHRYHKRYLPNYGVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G + +G+ +CEDIW + GA L +++ASPY+ K Sbjct: 119 ENRYFREGGGAPVLRLDGTLVGVSVCEDIWYPGGPAREQALAGASVLLNISASPYHRRKG 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R +++ + S +++ N VGGQDEL+FDG S FD + +L + + F E + Sbjct: 179 ALRERMLSVRASDYGCYVLFCNLVGGQDELVFDGHSVVFDPEGRLLARARQFEEDLLFVD 238 Query: 245 WHYD--------------------------QQLSQWNYMSDDSASTMYIPLQEEEADYNA 278 + + + + L EE A Sbjct: 239 LYPEEALVQRLHESRPRKEELETEPEVVEVPGFRERREPAQSREPRAEELLPEEGEVLEA 298 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 VL LRDY +KN F + ++GLSGGIDS+L AA+A ALG ENV +++P +YTS S D Sbjct: 299 LVLGLRDYFRKNGFSRAVLGLSGGIDSSLTAAVAARALGPENVTGVLMPSRYTSEASNAD 358 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A A AK LG V+PI + + ++++ + P + ENIQ+RIRGNI+MALSN Sbjct: 359 ARAVAKNLGIDVRVIPIGRAFDAYREMLAEVFRGLPEDVTEENIQARIRGNIVMALSNKF 418 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 + L+T NKSE+SVGY TLYGDM+GGF+ LKD+ KT V+++A + N E Sbjct: 419 GWIALSTGNKSEMSVGYSTLYGDMAGGFSVLKDVPKTLVYRVARYVNE-------AEGRE 471 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRY 517 VIP S+L K PSAELRP Q D +SLPPY +LD I++ VE+++ + +E VR Sbjct: 472 VIPESVLTKEPSAELRPGQRDVDSLPPYEVLDPILEAYVEDDKGVGEIVAMGFEEEDVRR 531 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V ++ +EYKRRQAPVG K+T ++FGRDR PI+N++ + Sbjct: 532 VVRMVDRAEYKRRQAPVGIKVTTRAFGRDRRMPITNRYSE 571 >gi|167038045|ref|YP_001665623.1| NAD+ synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040910|ref|YP_001663895.1| NAD+ synthetase [Thermoanaerobacter sp. X514] gi|300914946|ref|ZP_07132262.1| NAD+ synthetase [Thermoanaerobacter sp. X561] gi|307723820|ref|YP_003903571.1| NAD+ synthetase [Thermoanaerobacter sp. X513] gi|320116454|ref|YP_004186613.1| NAD+ synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855150|gb|ABY93559.1| NAD+ synthetase [Thermoanaerobacter sp. X514] gi|166856879|gb|ABY95287.1| NAD+ synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300889881|gb|EFK85027.1| NAD+ synthetase [Thermoanaerobacter sp. X561] gi|307580881|gb|ADN54280.1| NAD+ synthetase [Thermoanaerobacter sp. X513] gi|319929545|gb|ADV80230.1| NAD+ synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 543 Score = 586 bits (1512), Expect = e-165, Method: Composition-based stats. Identities = 225/564 (39%), Positives = 323/564 (57%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINTAKYQKADLVVFPELATVGYPPKDFLFMQDFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-QEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A I+ + + G+++G RQD + + NS + G I+ + DK LPNY F Sbjct: 61 ANEKYINEIV-LPNTNQIGVILGTVRQDTEGNLYNSAFFIYEGEIVEIFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEFLFS 173 EKR F F+ I+LG+ ICEDIWK+ ++ + K + + Sbjct: 120 DEKRYFKPAQLRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQFKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPYY K R E++ +I +P +YVNQVG DELIFDGASF + + + Q+ Sbjct: 180 ISASPYYLGKENMRVEMIEKKIKKYAIPFVYVNQVGANDELIFDGASFVVNEEGKRVVQL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + + + L + + +D + YNA VL +RDY +K+ F Sbjct: 240 KAFEEDIKVFDIDELKNLRKLPEIKEDIS-----------WVYNALVLGVRDYCKKSGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A LG ++ V+ Sbjct: 289 KAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKSDARILADNLGIEFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE+++ Sbjct: 349 PIEPVFKSYLSVFNGD-NNVIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDMSG P+ D+ KT V+ LA + N E+IP SI+EK+PSAEL Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYDLARFINRE---------REIIPISIIEKAPSAEL 458 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP+Q D++SLPPY ILD+I+K +E S ++ Y++ V+ V + + EYKR+QA Sbjct: 459 RPNQKDEDSLPPYKILDEILKMYIEENRSAKEIIEKGYDERLVKDVINKVNRVEYKRKQA 518 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 G KIT K+FG R PI + F+ Sbjct: 519 APGLKITTKAFGTGRRMPIVHNFK 542 >gi|289548051|ref|YP_003473039.1| NAD+ synthetase [Thermocrinis albus DSM 14484] gi|289181668|gb|ADC88912.1| NAD+ synthetase [Thermocrinis albus DSM 14484] Length = 565 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 212/575 (36%), Positives = 318/575 (55%), Gaps = 37/575 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A+AQ+NP+VGD N ++ L++F EL ISGYPPEDL+ + F++ Sbjct: 3 INVALAQINPLVGDPENNTQLIMERWQK-VDDKAHLVVFPELSISGYPPEDLLLRWEFVK 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A++ L + + VVG P + + + N++VIL G ++ + K +LPNYS F Sbjct: 62 GCEKALNKLVEFSKSMKSVCVVGTPYWNGD-LYNALVILQGGKVLGIYRKKHLPNYSVFD 120 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + + LG +CEDIW ++ GA+ L ++NASPY+ K Sbjct: 121 EKRYFRGGEEPLLMEIDGVVLGFSVCEDIWHPDGWERYYATAGADILININASPYHMGKY 180 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + + + ++YVN VGGQDEL+FDG S D + + + K F E + Sbjct: 181 AFKEAFLKARAEDNLCYVVYVNSVGGQDELVFDGRSLVIDPEGNVIARCKAFEEDLKVVS 240 Query: 245 WHY---------------DQQLSQWNYMSDDSASTMYIPLQEEE------ADYNACVLSL 283 + + D + Y+ E Y A VLS+ Sbjct: 241 LDVLKGRRRRLVDVRLRERPFVREKPLTHTDGRTLPYVEGTVEHSLEGEEELYRAVVLSI 300 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 ++YV+KN F KV++GLSGGIDS+L A +AVDALG+E V + +P +TS +S + Sbjct: 301 KEYVEKNGFRKVVVGLSGGIDSSLVACMAVDALGEERVVGVFMPSVFTSEESRQAVYQLV 360 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 K L + PI ++N + S+M + + EN+QSRIR NIL LSN ++L Sbjct: 361 KNLRIQLLEFPIEGIMNSYKSMMG----WDDITVAEENLQSRIRANILFYLSNRYGYLVL 416 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 +TSNKSE++ GYGT+YGDM+GGF PLKDLYKT V++LA +RN + E IP Sbjct: 417 STSNKSELATGYGTIYGDMAGGFAPLKDLYKTYVYRLAYYRNR---------VKEDIPSF 467 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLL 522 +L + P+AELRPHQ D+++LPPYP+LD I+ +E S + + E V V ++ Sbjct: 468 VLTRPPTAELRPHQKDEDTLPPYPVLDKILFHYIEEGLSVEEIVRRGFERELVCKVVKMI 527 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +EYKR+Q+P+G K+T+++FG+D PI+N +RD Sbjct: 528 KSAEYKRKQSPLGPKLTSRAFGKDWRVPITNGWRD 562 >gi|166064263|gb|ABY79062.1| NAD(+) synthase [endosymbiont of Ridgeia piscesae] Length = 553 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 234/559 (41%), Positives = 331/559 (59%), Gaps = 8/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K ++ +AQLNP VG +A N A A A ++ G D++ TE+FI+GY +DLV K Sbjct: 1 MSDKFRLTLAQLNPTVGALADNAALALDAWQQGRAAGADMVALTEMFITGYQVQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + I+ L D D G + +G P D + + N+ IL+ G I A K LPN Sbjct: 61 AFTADAMAHIEQLAKDCAD-GPALGIGGPFADGDKLYNAYYILEGGKIAARVLKQKLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R + G P +R+G ICED W +C+ L + GAE L N SPYY Sbjct: 120 TVFDEVRLYDVGPEQGPYQVGPLRIGSPICEDAWHAEEVCETLAETGAEILLVPNGSPYY 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 +KL R + ++ LP++Y+N VGGQD+ +FDGASF + LA QM F Sbjct: 180 RDKLAVRMNHMVARVVETDLPLVYLNMVGGQDDQVFDGASFVLNRGGALALQMPAFDTAI 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ Q ++ E DY VL LRDY++K F K+++G+S Sbjct: 240 AHVDFTRTDAGWQAKVGDMAPQPDVW------EQDYRTMVLGLRDYMRKTGFRKILLGMS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DALG +NV+ +MLP +YTS SL DA A+ LGC+YD +PI + Sbjct: 294 GGIDSAIVATIATDALGADNVRCVMLPSEYTSEDSLNDAKEIAQNLGCRYDFVPISEGRA 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + ++ + + + ENIQSR+RG +LMALSN MLLTT NKSE++VGY T+YG Sbjct: 354 AITNTLAPLFEGTKADVTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEVAVGYATIYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KD+YKT+VF+ WRN++ +GP E+IPP +++K P+AELR Q D Sbjct: 414 DMAGGYNPIKDMYKTRVFETCRWRNANKRDWMMGPSGEIIPPRVIDKPPTAELREDQRDD 473 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I+ +V++E+S + + V+ VEHLLY SEYKR Q+ G ++T Sbjct: 474 DSLPPYDVLDAILTGLVDDEKSVAELVADGFARDVVKKVEHLLYISEYKRFQSAPGPRLT 533 Query: 540 AKSFGRDRLYPISNKFRDH 558 +SF DR YPI N++RD Sbjct: 534 MRSFWLDRRYPIVNRWRDQ 552 >gi|53804666|ref|YP_113448.1| NAD(+) synthetase [Methylococcus capsulatus str. Bath] gi|53758427|gb|AAU92718.1| NAD(+) synthetase [Methylococcus capsulatus str. Bath] Length = 539 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 228/555 (41%), Positives = 325/555 (58%), Gaps = 20/555 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSF 62 L+IAIAQL+ +VGD+ GN + A A + G ++F EL ++GYPP+DL+ + F Sbjct: 2 NLRIAIAQLDFLVGDVGGNADRVLAAAVRARDELGAHAVVFPELALAGYPPDDLILRPDF 61 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + A +A+ L G ++VGFP + NS +L G I V K LPNY Sbjct: 62 LTAVETALKVLAERVR--GIDVIVGFPERHDGLPFNSAAVLRDGGIHKVYRKQILPNYGV 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F+ G + R + +G+ ICED+W + GA + +LNASP++ Sbjct: 120 FDEKRHFLPGSAPCVFDLRGVPVGLTICEDVW-FPGPVEQAAAAGARLVLNLNASPFHVG 178 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K +R +V +I+ +P++Y N VGGQDEL+FDG SF D L ++ F E Sbjct: 179 KSVEREHVVRERIAAARVPLVYTNLVGGQDELVFDGGSFVMDAAGGLVYRAPQFGETLDA 238 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + D+ + ++ + P+ E E+ Y A V +RDYV KN F ++GLSGG Sbjct: 239 VGFTVDEDG------VNPLSARLVEPMGEVESVYAALVTGIRDYVGKNGFRGAVLGLSGG 292 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL A+AVDALG + V+ +++P +YT+ S+EDA A+ L + ++PI + F Sbjct: 293 IDSALTLALAVDALGADRVEAVLMPSRYTADISIEDARQEAETLAVAWHLIPIEPVFRSF 352 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 L++ P+ + ENIQ+R RG ILMALSN +LLTT NKSE+SVGY TLYGDM Sbjct: 353 LDLLAGPFAGAPADVTEENIQARCRGVILMALSNKQGRILLTTGNKSEMSVGYATLYGDM 412 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF PLKD+ K V++LA +RN+ ++ VIPP ++E+ PSAELRP Q D++S Sbjct: 413 AGGFAPLKDVSKLLVYRLAEYRNA---------VSAVIPPRVIERPPSAELRPDQKDEDS 463 Query: 483 LPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD I+ VE + S Y ++ VR V L+ +EYKRRQAP G KIT + Sbjct: 464 LPPYAVLDPILALYVEQDRSIAEIVAAGYPEDVVRRVVRLVDRNEYKRRQAPPGIKITRR 523 Query: 542 SFGRDRLYPISNKFR 556 +FGR+R YPI+ F Sbjct: 524 AFGRERRYPITCGFE 538 >gi|300703412|ref|YP_003745014.1| nh3-dependent nad+ synthetase (nade) [Ralstonia solanacearum CFBP2957] gi|299071075|emb|CBJ42384.1| putative nh3-dependent nad+ synthetase (nadE) [Ralstonia solanacearum CFBP2957] Length = 546 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 221/562 (39%), Positives = 320/562 (56%), Gaps = 31/562 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN+ + A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNVVRIVAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLNAT 64 Query: 67 SSAIDTLK-SDTHDGGAGIVVGFPRQDQE---------GVLNSVVILDAGNIIAVRDKIN 116 S A+D L G +++G P+ E N+ + G ++ K+ Sbjct: 65 SRALDALVVELAAFPGLHVLIGHPQLSFEAPAPGSALPKPTNTATVAVDGRMLGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPN F EKR F +G R G++ICED W K GAE + NA Sbjct: 125 LPNNEVFDEKRYFQAGCEPFVFEVEGTRFGVIICEDAWYPQATA-WAKTAGAEVVLIPNA 183 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + +M F Sbjct: 184 SPYHLDKEDLREQIIGARVKESGLPHVYVNLVGGQDELVFDGGSFVLDAHGKPVARMAQF 243 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 +E + + + E Y A L +RDY+ KN F I Sbjct: 244 AEGVGYVRFD----------GARPQPGEIAQEATLEAQVYEALKLGVRDYIGKNGFPGAI 293 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 IGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD +PI Sbjct: 294 IGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAVRLGVRYDEIPIM 353 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + F ++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE++VGY Sbjct: 354 PMFDAFRGALADEFRNLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVGYC 413 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR + Sbjct: 414 TLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELREN 464 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLP Y LD I++R +E + + + + V+ + LL +EYKRRQAPVG Sbjct: 465 QTDQDSLPEYAALDAIVQRYMEQNQPVADIIAAGFAEADVQKIVRLLKINEYKRRQAPVG 524 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 ++T ++FGRD YPI+++F++ Sbjct: 525 IRVTQRAFGRDWRYPITSRFKE 546 >gi|251770857|gb|EES51444.1| NAD+ synthetase [Leptospirillum ferrodiazotrophum] Length = 593 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 221/602 (36%), Positives = 322/602 (53%), Gaps = 58/602 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ LK+ + Q+N VVGD+ GN A+ RR E + +D+ F EL I+GYPPEDL+ K + Sbjct: 1 MRSLKVGLFQMNSVVGDLEGNAARIRRHLESPVAKSLDIAAFPELAITGYPPEDLLLKPT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F++ + TL + ++VGF Q + + N+ I+ G ++ V+ K LPNY Sbjct: 61 FLEKNRQVLATLFDMAPEL--LVIVGFVEQADD-IYNAAAIIYRGRLVGVQRKQYLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYY 180 F E R F SG SN + +R+ +G+ ICEDIW H G AE + +L+ASP++ Sbjct: 118 VFDENRYFQSGSSNTLVRYRNTTIGVNICEDIWYPKGPLYHQALDGDAEVIVNLSASPFH 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R ++ + + I+Y N VGGQDEL+FDG S + ++ + + F+E Sbjct: 178 AGKREVRESMLKTRAADNGTYIVYTNLVGGQDELVFDGQSLVISPEGEIECRGRAFAEDV 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSAS------------------------------------- 263 +TE D+ + Sbjct: 238 VVTEIDVDRVFGVRLHDPRRRKEKLSRVYGADWGSFPMTMVDLDAMNGTPSPPPQKPRRL 297 Query: 264 ---TMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN 320 + PL + E Y A + +RDYV KN V++G+SGG+DSAL AAIA DALG Sbjct: 298 ERGPLNTPLSDVEEVYEALTMGVRDYVAKNRLTDVLVGISGGVDSALVAAIACDALGPAR 357 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE-----PS 375 V + +P YTS +S EDA A + ALG + + +PI +L + F S ++ + Sbjct: 358 VHGVFMPSVYTSAESREDATALSAALGFRLETIPIKELCDSFASALAPSFGDRHAKDPEG 417 Query: 376 GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKT 435 EN+Q RIRG +LMALSN ++LTT NKSE+ VGY TLYGDM+GGF LKD+ KT Sbjct: 418 DTTDENLQPRIRGMLLMALSNKFGHLVLTTGNKSEMGVGYMTLYGDMAGGFAVLKDVPKT 477 Query: 436 QVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKR 495 +V+ L RNS G + IP ILEK+P+AELRP Q D +SLP Y ILD I+ Sbjct: 478 EVYALCRLRNSRGPGA--------IPERILEKAPTAELRPDQRDTDSLPSYDILDPIMAA 529 Query: 496 IVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 VE + + + ++ V V L+ SEYKRRQ+P G KI+ ++FG+D P++N+ Sbjct: 530 YVEEDLGYEEIVGRGFDPADVARVIRLVDRSEYKRRQSPPGVKISLRAFGKDWRLPMTNR 589 Query: 555 FR 556 F+ Sbjct: 590 FK 591 >gi|298491871|ref|YP_003722048.1| NAD+ synthetase ['Nostoc azollae' 0708] gi|298233789|gb|ADI64925.1| NAD+ synthetase ['Nostoc azollae' 0708] Length = 557 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 223/570 (39%), Positives = 316/570 (55%), Gaps = 33/570 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI I QLNP++GD+ GN K ++A L+L EL + GYPP DL+ SF++ Sbjct: 1 MKITIVQLNPIIGDLPGNAQKILETAQQAVSANARLLLTPELSLCGYPPRDLLLNPSFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 A ++ + L D ++VG ++ + + NS+ L+AG I K L Sbjct: 61 AMNTTLQKLAKDLPP-NLAVLVGTVVKNTEAYINGGKTLFNSIAWLEAGKIKQYFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQG 167 P Y F EKR F G + DI +G+ ICED+W + N L G Sbjct: 120 PTYDVFDEKRYFEPGLQANYFSLDDINIGVTICEDLWNDEEFWGKRSYAVNPIADLSILG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K K R ++ + P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDLIVNLSASPYTVGKQKLREAMLQHSAVNFQEPVIYTNQVGGNDDLIFDGRSFALNLQG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + K F + E+ Q+ Q +S + E+E ++A VL +RDYV Sbjct: 240 EIICRAKGFETDLLVVEFDETQRDLQLGSISP-------VYESEDEEIWHALVLGVRDYV 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 K F +V++GLSGG+DSAL AAIA ALGKENV I++P Y+S SL DA A A L Sbjct: 293 NKCRFSEVVLGLSGGVDSALVAAIATAALGKENVLGILMPSPYSSEHSLTDALALAVNLE 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 K +LPI +L+ F + + + GI ENIQSRIRGN+LMA++N +LL+T N Sbjct: 353 IKTHILPIGELMQGFNNSLVELFAGTEFGIAEENIQSRIRGNLLMAIANKFGYLLLSTGN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V+ L +W N H E+IP +IL K Sbjct: 413 KSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCNWLNFHSNR-------EIIPQNILTK 465 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSE 526 PSAEL+P Q DQ+SLP Y ILDDI++ +V + +S ++ V V ++ +E Sbjct: 466 PPSAELKPGQVDQDSLPAYEILDDILQHLVHDHQSGEQIVASGHDSAIVNRVLQMVARAE 525 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +KRRQAP G KIT ++FG PI+ F Sbjct: 526 FKRRQAPPGLKITDRAFGTGWRMPIARVFS 555 >gi|238028323|ref|YP_002912554.1| NAD synthetase [Burkholderia glumae BGR1] gi|237877517|gb|ACR29850.1| NAD+ synthetase [Burkholderia glumae BGR1] Length = 561 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 228/576 (39%), Positives = 323/576 (56%), Gaps = 34/576 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVARIVEAARAAHDDGAQLLVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG----------------VLNSVVILD 104 F + A+ L G ++VG P + N+ +L Sbjct: 60 FYTEAAEALARLAECLKPFEGLAVLVGHPLRTPSADGNANRPIGRGATPVDTYNAASLLV 119 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G I A K +LPN F EKR F + R G++ICED W +++ + K Sbjct: 120 GGAIAATYRKQDLPNTEVFDEKRYFATDPQPCVFELNGTRFGVIICEDAW-HASAAQLAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GAE L N SPY+ +K R IV +I LP++YVN VGGQDEL+FDG SF D Sbjct: 179 AAGAEVLLVPNGSPYHMDKDAVRVGIVRARIRETGLPVVYVNLVGGQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 G +L +M F + + E+ + + PL E Y A VL +R Sbjct: 239 GAGELVARMPQFEAGHAIVEFD----------GARPLPGEIAAPLPVEAQVYRALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAAEMAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 +G +YD + I + + F ++ ENIQ+RIRG +LMALSN +++LT Sbjct: 349 RVGVRYDEIAIAPMFDAFCGALADEFAGRDEDATEENIQARIRGTLLMALSNKFGSIVLT 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ TEVIP I Sbjct: 409 TGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEFGS----TEVIPARI 464 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLY 523 L ++PSAELR +QTDQ+SLPPY +LD I++ +E ++ Y++ V V L+ Sbjct: 465 LSRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDQPLAAIVAAGYDEADVTRVTRLIK 524 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAP+G ++T ++FGRD YPI+++F + I Sbjct: 525 INEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERI 560 >gi|187929635|ref|YP_001900122.1| NAD synthetase [Ralstonia pickettii 12J] gi|309781599|ref|ZP_07676333.1| phenylalanyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] gi|187726525|gb|ACD27690.1| NAD+ synthetase [Ralstonia pickettii 12J] gi|308919574|gb|EFP65237.1| phenylalanyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 545 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 224/564 (39%), Positives = 319/564 (56%), Gaps = 30/564 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + +A+AQ+N VGD AGN A+ A EA++ G ++L EL ++GYPPEDL+ + +FI Sbjct: 2 TVSVALAQINCTVGDFAGNAARIVAAAREAHQAGARILLTPELSLTGYPPEDLLLRPAFI 61 Query: 64 QACSSAIDTL-KSDTHDGGAGIVVGFP----RQDQEGVL----NSVVILDAGNIIAVRDK 114 A + A+D L G +++G P GVL NS + G ++ DK Sbjct: 62 DASARALDALIAELAAFPGLHVLIGHPQLSLEAPAPGVLPKPTNSATVALDGRVVGRYDK 121 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 + LPN F EKR F G R G++ICED W + A+ + Sbjct: 122 LELPNNEVFDEKRYFQPGTEPFVFEVDGTRFGVIICEDAWYATATAYAKAAG-AQVVLIP 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ +K R I+ ++ LP +Y N VGGQDEL+FDG SF D + + +M Sbjct: 181 NASPYHLDKEDLRERIIGARVKESGLPHVYANLVGGQDELVFDGGSFVLDAEGNVVLRMG 240 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E ++ T+ E Y A L +RDY+ KN F Sbjct: 241 QFVEGVGYVQFD----------GGRALPGTIVPEPPLEAQVYEALKLGVRDYLGKNGFPG 290 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD + Sbjct: 291 AIIGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAARLGVQYDEIA 350 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I + + F +++ + P ENIQ+RIRG +LMALSN S ++LTT NKSEI+VG Sbjct: 351 ISPMFDAFKGALAEEFRGLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEIAVG 410 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGF +KD++KT V++L +RNS L+EVIP IL ++PSAELR Sbjct: 411 YCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNS---------LSEVIPERILTRAPSAELR 461 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAP 533 +QTDQ+SLP Y LD I++R +E + + + + V+ + L+ +EYKRRQAP Sbjct: 462 ENQTDQDSLPEYDALDAIVQRYMEQNQPVADIIAAGFAEADVQKIVRLIKINEYKRRQAP 521 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 VG ++T ++FGRD YPI+++F++ Sbjct: 522 VGIRVTPRAFGRDWRYPITSRFKE 545 >gi|319762455|ref|YP_004126392.1| nad+ synthetase [Alicycliphilus denitrificans BC] gi|317117016|gb|ADU99504.1| NAD+ synthetase [Alicycliphilus denitrificans BC] Length = 552 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 229/558 (41%), Positives = 319/558 (57%), Gaps = 19/558 (3%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQLN VVGD+ GN K A +A G L+L EL I GY EDL + +F+ AC Sbjct: 5 ISIAQLNFVVGDLQGNAQKIIDAARQAYAAGARLLLTPELAICGYAAEDLFLRPAFLAAC 64 Query: 67 SSAIDTLKSDTHDG-GAGIVVGFPRQDQ------EGVLNSVVILDAGNIIAVRDKINLPN 119 A+ + T D G IV+G PR LN+ +L AG + K LPN Sbjct: 65 DEAVQAVARGTADLAGLAIVLGHPRAAAPGAPAFSSCLNAASVLRAGRVEQTYTKRELPN 124 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F E+R F++G + +R+G+LICED W S + GA+ L +NASP+ Sbjct: 125 YQVFDERRYFVAGDAPCVFEVEGVRVGLLICEDAW-FSAPARDAATAGAQLLAVINASPF 183 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K +R + + +++ LP++Y + VGGQDE++F+G SF + +A + F E+ Sbjct: 184 HLGKGAEREQTMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALNADGTVAMRAPAFEEK 243 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + H Q + + + E ++A VL +RDYV KN F ++GL Sbjct: 244 LVFAQVHQAQAAIEME-------ADVAPERSLEADLWDALVLGVRDYVGKNGFPGALLGL 296 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALG + V+T+M+P YT+ S DA A LG +YD + I Sbjct: 297 SGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAARLGVRYDEIAIAPQF 356 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + ++ + EN+Q+RIRG +LMALSN A++LTT NKSE++ GY TLY Sbjct: 357 EAFKAALAPLFEGRAEDTTEENLQARIRGTLLMALSNKFGAVVLTTGNKSEMATGYCTLY 416 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF +KD+ KT+VF LA WRN++ G IP I+ + PSAELRP Q D Sbjct: 417 GDMAGGFAVIKDVVKTRVFDLARWRNANDP---YGTGANPIPERIIIRPPSAELRPDQKD 473 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY +LD I+ R +EN+E + Y+ V V L+ +EYKRRQAPVG ++ Sbjct: 474 QDSLPPYEVLDAILARYMENDEPVEDIVRAGYDRADVERVTRLIKINEYKRRQAPVGVRV 533 Query: 539 TAKSFGRDRLYPISNKFR 556 T +SFG+D YPI+NKFR Sbjct: 534 TRRSFGKDWRYPITNKFR 551 >gi|88811118|ref|ZP_01126374.1| NAD(+) synthetase [Nitrococcus mobilis Nb-231] gi|88791657|gb|EAR22768.1| NAD(+) synthetase [Nitrococcus mobilis Nb-231] Length = 543 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 225/557 (40%), Positives = 317/557 (56%), Gaps = 20/557 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M +L+IA+AQLN +VGD+ GN A A + +++F EL ++GYPP+DL+ + Sbjct: 1 MNDRLRIAMAQLNLLVGDVRGNTLAVIDAACRARDELRARVVIFPELALTGYPPDDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ S+AI L D ++VG P + G++N+ ++++ G I A K LP Sbjct: 61 NDFLGEVSAAIAQLCRAVRD--VTLIVGAPVRSATGLMNAALVIEQGRIAATYAKHYLPT 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F + R F G + + R+G+ ICED W + + GAE + +LNASP+ Sbjct: 119 YGVFDDTRYFEPGSAPCVVEVAGCRIGVTICEDAW-HPEPVAWAVQMGAEVVVNLNASPF 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K R ++ +I + ++Y N GGQDE+++DGAS F L + F Sbjct: 178 DQYKRAAREAVIRERIGESGVAMLYCNMAGGQDEVVYDGASCAFGRHGDLRVRAPRFRPG 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + Q + ++ EE Y+A V +RDYV+KN F VIIGL Sbjct: 238 LVPVDL------LQRGGGWEALEGSIEEDPSEEAVLYDALVWGVRDYVEKNGFPGVIIGL 291 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL +AVDALG E V+T+M+P +YTS S DAAA A +L ++ V+ I + Sbjct: 292 SGGIDSALVTCVAVDALGAERVETVMMPTQYTSEISWTDAAALAGSLRIRHRVIAIEGVF 351 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + + P+ + EN+QSRIRG +LMALSN ++L T NKSE++VGY TLY Sbjct: 352 KAFSETLQPVFADAPADVTEENLQSRIRGTLLMALSNKQGKLVLATGNKSELAVGYATLY 411 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM GGF PLKD++KT V+ LA +RN L EVIP SIL + PSAELRP+Q D Sbjct: 412 GDMVGGFAPLKDIFKTDVYSLARYRN---------ELGEVIPQSILTRPPSAELRPNQLD 462 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLP Y +LD I+ VE + S + Y+ TV V L++ +EYKRRQAP G K+ Sbjct: 463 TDSLPEYIVLDTILAAYVEEDRSVEEIVAEGYDRATVEEVVRLVHRNEYKRRQAPPGVKV 522 Query: 539 TAKSFGRDRLYPISNKF 555 T K+FGRDR YPI++ F Sbjct: 523 TTKAFGRDRRYPITSGF 539 >gi|302878486|ref|YP_003847050.1| NAD+ synthetase [Gallionella capsiferriformans ES-2] gi|302581275|gb|ADL55286.1| NAD+ synthetase [Gallionella capsiferriformans ES-2] Length = 534 Score = 584 bits (1507), Expect = e-164, Method: Composition-based stats. Identities = 229/555 (41%), Positives = 320/555 (57%), Gaps = 23/555 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQ+N V+GD+AGN AK A + A + G L+L EL + GYPPEDL+ + F + Sbjct: 1 MKLAIAQINCVLGDLAGNSAKILHAAQRACQAGAQLMLTPELSLCGYPPEDLLLRNGFYK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +C++++ L + D ++VG P + N+ +L G + A K LPNY+ F Sbjct: 61 SCAASLSELARNISD--IAVIVGHPHEQDGKRYNAASLLRDGRVEATYFKHFLPNYAVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G + + G+ ICED+W S + + GA+ L LNASPY KL Sbjct: 119 EERYFSCGNAPMVFEMSGVHFGVNICEDVWG-SEAARVAAQAGADVLLVLNASPYSVEKL 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 RHE+V +++ + ++Y N VGGQDEL+FDG SF D +L Q F E Sbjct: 178 ASRHEVVRQRVAETDMAVVYANMVGGQDELVFDGGSFAMDRSGRLIAQSAIFEETLSYVS 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 S +P+QE Y A VL LRDYV KN F V++GLSGGID Sbjct: 238 LD---------AHGVPSGEIAVLPMQEAAV-YQAMVLGLRDYVGKNRFPGVLLGLSGGID 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A+AVDALG + V +M+P YT+ SL+D+ + LG +YD I ++ + S Sbjct: 288 SALTLAVAVDALGADRVHAVMMPSPYTAQISLDDSREMIRILGVRYDEFSIEPVMESYLS 347 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ P EN+Q+RIRGN+LMALSN A++LTT NKSE+SVGY TLYGDM+G Sbjct: 348 VLRASFAGRPEDTTEENLQARIRGNLLMALSNKLGALVLTTGNKSEMSVGYATLYGDMAG 407 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF+ LKD+ K V++LA +RN+ G VIP I+ ++PSAELR QTDQ++LP Sbjct: 408 GFSVLKDVGKLLVYRLARYRNTQGQ---------VIPERIITRAPSAELRHDQTDQDNLP 458 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD I+ VE S Y + VR V L+ SEYKRRQ+ G +IT + + Sbjct: 459 PYEVLDGIMACYVEKNLSIPEVIAAGYQEADVRRVVRLIQSSEYKRRQSATGVRITERGY 518 Query: 544 GRDRLYPISNKFRDH 558 G+D YPI+ +++D Sbjct: 519 GKDWRYPITVRYQDQ 533 >gi|268317860|ref|YP_003291579.1| NAD+ synthetase [Rhodothermus marinus DSM 4252] gi|262335394|gb|ACY49191.1| NAD+ synthetase [Rhodothermus marinus DSM 4252] Length = 571 Score = 584 bits (1506), Expect = e-164, Method: Composition-based stats. Identities = 215/575 (37%), Positives = 316/575 (54%), Gaps = 38/575 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLNP+VGD+ GN K +A RQG +L++F E+ ++GYPP+DL+ +FI+ Sbjct: 1 MKIALAQLNPIVGDLQGNRRKIVDFAHQAYRQGAELVIFPEMCVAGYPPQDLLDMPAFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 A + ++T+ + G+++G P ++ + + N+ ++L+ G I+A K LP Y Sbjct: 61 AVAHTVETIALEVPRE-LGVILGAPIRNESPVGKRLFNAALLLEGGRIVARVPKRLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEF 170 F E R F G + +R +R+G+ ICED+W + N L QG + Sbjct: 120 DVFDEYRYFEPGPPQPVVEWRGLRIGLHICEDMWNNEDWAPYHLYDENPIDELAAQGIDL 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 +++ASP+ K +R I+ G +P IYVNQVG ELIFDG S + Sbjct: 180 FVNISASPFSLGKHDERSRIIEGICREHGVPFIYVNQVGANTELIFDGDSRVHAPDGSIL 239 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 F E + + D E E ++A VL +RDY K Sbjct: 240 LCAPSFQEALLIWDTEADYAPYVHRR-------------TEIEDLHDALVLGIRDYFYKT 286 Query: 291 N-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F KV++GLSGGIDSA+ A+AV ALG E V + +P KY+SP+S+EDA A+ LG Sbjct: 287 GAFEKVVLGLSGGIDSAVVCALAVAALGPERVVGVAMPSKYSSPESVEDARQLAENLGIT 346 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + ++PI V+ F ++ + P + ENIQ+R+RG LMALSN + +LL+T NKS Sbjct: 347 FHIIPIMPAVDAFREMLRPVFDDLPEDVTEENIQARVRGVTLMALSNKFRYLLLSTGNKS 406 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGD +GG L D+YKTQV++LA + N+ VIP IL K P Sbjct: 407 EMAVGYVTLYGDTNGGLAVLADVYKTQVYRLARYINARAGRY-------VIPERILTKPP 459 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ--EYNDETVRYVEHLLYGSEY 527 SAELRP Q D +SLPPY +LD I++R +E+ E ++ V + + +EY Sbjct: 460 SAELRPGQKDTDSLPPYEVLDVILQRYIEHREEVDEIVAATGFDRALVADILRRVDRNEY 519 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 KRRQ P G ++T K+FG R PI ++ + EE Sbjct: 520 KRRQTPPGLRVTGKAFGIGRRLPIVMRWNRAVLEE 554 >gi|160900307|ref|YP_001565889.1| NAD+ synthetase [Delftia acidovorans SPH-1] gi|160365891|gb|ABX37504.1| NAD+ synthetase [Delftia acidovorans SPH-1] Length = 559 Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats. Identities = 225/558 (40%), Positives = 316/558 (56%), Gaps = 16/558 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L I AQLN VVGD+ GN+ K A EA G L+L EL + GY EDL + +F+ Sbjct: 12 TLSICTAQLNFVVGDLPGNVQKIIAAAREAYATGARLLLTPELALCGYAAEDLYLRPAFL 71 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPRQD---QEGVLNSVVILDAGNIIAVRDKINLPN 119 AC A+ L +T G +V+G P +D + N+ +L G + K LPN Sbjct: 72 DACDQAVQQLALETAQWPGLALVLGHPWRDPGAGGALRNAASVLRDGRVECSHAKQCLPN 131 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F E+R F++G S I + +R+G+LICED W + + + GA+ L +NASP+ Sbjct: 132 YGVFDEQRYFVAGQSPCVIEVQGVRVGLLICEDAW-HPEPARAAAQAGAQLLAVINASPF 190 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K +R + + LP++Y + VGGQDE++FDG SF +A + F+E Sbjct: 191 HEGKQAEREATLAARACETGLPLVYAHLVGGQDEIVFDGCSFAVQADGSIAARAPAFAEA 250 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 E + + A + A ++A VL++RDYV KN F ++GL Sbjct: 251 LPRVEV-------RTGGHALVLAGEVIAQPGHLPALWSALVLAVRDYVGKNRFPGALLGL 303 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALG + V T+M+P YT+ S DA A+ +G +YD + I Sbjct: 304 SGGIDSALVLAIAVDALGADKVHTVMMPSPYTADISWIDARDMAERVGVRYDEISIAPQF 363 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + ++ EN+Q+RIRG +LM LSN +++LTT NKSE+S GY TLY Sbjct: 364 EAFKAALAPAFASRAEDTTEENLQARIRGTLLMGLSNKFGSVVLTTGNKSEMSTGYCTLY 423 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF +KD+ KT+VF LA WRN++ G + IP I+ + PSAELRP Q D Sbjct: 424 GDMAGGFAVIKDVLKTEVFALARWRNANDP---FGTGLDPIPDRIITRPPSAELRPDQKD 480 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y +LD I++R +EN ES + Y V V L+ +EYKRRQAPVG ++ Sbjct: 481 QDSLPAYEVLDAIVRRYMENNESIASIVADGYASADVERVTRLIQINEYKRRQAPVGPRL 540 Query: 539 TAKSFGRDRLYPISNKFR 556 T +SFG+D YPI+N+FR Sbjct: 541 TRRSFGKDWRYPITNRFR 558 >gi|188575738|ref|YP_001912667.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520190|gb|ACD58135.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 547 Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats. Identities = 221/556 (39%), Positives = 311/556 (55%), Gaps = 20/556 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 L+IA+AQ + VG + N + A + G D++LF EL ISGYPPEDL+ + F+ Sbjct: 6 LRIAMAQFDFPVGAVTQNTDRIIEYIAAARDEYGADIVLFPELAISGYPPEDLLLRPGFL 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 C A+ + + T G VVG+P+ V N+ +L G I A K LPNY+ F Sbjct: 66 AHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPNYAVF 123 Query: 124 HEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 E+R F N + + +++G++ICED+W + + K GAE + NASPY Sbjct: 124 DERRYFDVDPDGENCVVTVKGVQVGVVICEDLW-FAEPLANTVKAGAELVLVPNASPYER 182 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R ++ + I Y+N VGGQD L+FDGAS DG + F +Q Sbjct: 183 GKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVDQWL 242 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + ++ ++ DD +M + A V L+DY KN F KV +GLSG Sbjct: 243 VVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCSKNGFSKVWLGLSG 296 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 297 GIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETVAIEPAFEG 356 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T+YGD Sbjct: 357 LLAALGPLFAGTEPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYATIYGD 416 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M GG+ PLKDLYKT+VF LA WRN+ VIPP+++ + PSAELR +QTDQ+ Sbjct: 417 MCGGYAPLKDLYKTEVFGLAKWRNTVDG-------APVIPPAVISRPPSAELRDNQTDQD 469 Query: 482 SLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LD I+ R V+ E+S + Y ETV +V L+ +E+KR Q+ G K++ Sbjct: 470 SLPPYDVLDAILYRYVDQEQSRDDIVAAGYAAETVEHVLRLVRLNEWKRHQSAPGPKVSR 529 Query: 541 KSFGRDRLYPISNKFR 556 ++FGR+R YPI+N +R Sbjct: 530 RAFGRERRYPITNGYR 545 >gi|163735249|ref|ZP_02142684.1| NAD synthetase [Roseobacter litoralis Och 149] gi|161391463|gb|EDQ15797.1| NAD synthetase [Roseobacter litoralis Och 149] Length = 541 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 233/548 (42%), Positives = 324/548 (59%), Gaps = 9/548 (1%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAID 71 +NP VGD+AGN A AR G DL+ E+FI+GY +DLV K +F I+ Sbjct: 1 MNPTVGDLAGNAAIAREVWAAGKAAGADLVALPEMFIAGYNAQDLVMKPAFQLDAMRHIE 60 Query: 72 TLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFIS 131 L D D G + +G P + + N+ +IL G I++ K +LPN + F E R F + Sbjct: 61 ALAQDCAD-GPTLAIGSPWVEGTKLYNAYLILKGGKIVSQVLKHHLPNETVFDEVRIFDA 119 Query: 132 GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV 191 G P + R+G ICED W + ++ + L + GAEFL N SPYY K + R + Sbjct: 120 GPLGGPYSVGNSRVGSPICEDAW-HEDVAETLAETGAEFLLVPNGSPYYRGKFETRLNHM 178 Query: 192 TGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQL 251 ++ LP+IY+N VGGQD+ +FDGASF + LA Q+ F E + ++ Sbjct: 179 VARVIETELPLIYLNMVGGQDDQVFDGASFGLNPGGNLAVQLPAFDEA--VAHVDLERGP 236 Query: 252 SQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 W + + A E DY V +LRDY +K F KV++GLSGG+DSAL A I Sbjct: 237 EGWRIVEGEKAHHP----DAWEQDYRVMVQALRDYCRKTGFGKVLLGLSGGVDSALVATI 292 Query: 312 AVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 AVDA G +NV+ +MLP +YTS +SLEDA A AKALGC YD +PI + ++ + Sbjct: 293 AVDAFGAQNVRCVMLPSEYTSAESLEDAEAVAKALGCHYDYVPITEGRAAVEQTLAPLFE 352 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YGDM+GG+NP+KD Sbjct: 353 GHDADLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYGDMAGGYNPIKD 412 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 LYKT+VF+ WRN + + GP EVI P +++K PSAELR Q D +SLP YP LD Sbjct: 413 LYKTRVFETCRWRNKNHRSWMEGPDGEVITPRVIDKPPSAELREDQKDSDSLPDYPELDR 472 Query: 492 IIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 +++ +V+ S + + ET + +EHL+Y SEYKR Q+ G ++T +F DR YP Sbjct: 473 LLEILVDRNGSIEDCVAAGSDAETAKKIEHLIYISEYKRFQSAPGARLTKGAFWLDRRYP 532 Query: 551 ISNKFRDH 558 I N++RD Sbjct: 533 IVNRWRDR 540 >gi|307265807|ref|ZP_07547358.1| NAD+ synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919202|gb|EFN49425.1| NAD+ synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 543 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 224/564 (39%), Positives = 324/564 (57%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI GN K A Q DL++F+EL GYPP+D +F + F++ Sbjct: 1 MKIALAQINPVVGDIKGNFEKIVEFINRAKYQKADLVVFSELVTVGYPPKDFLFMQDFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEF 123 A I+ + G+++G RQD EG + NS + G I+ V DK LPNY F Sbjct: 61 ANEKYINEIV-LPATYQIGVILGTVRQDAEGNLYNSAFFIYDGKIVEVFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEFLFS 173 EKR F F+ I+LG+ ICEDIWK+ ++ + K + + Sbjct: 120 DEKRYFKPAQIRKVASFKGIKLGVNICEDIWKDYVFEPNVDYSVDVLEEQFKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPYY K R E++ +I +P +YVNQVG DELIFDG+SF + + + Q+ Sbjct: 180 ISASPYYLGKQNMRVEMIEKKIKKYAIPFVYVNQVGANDELIFDGSSFVVNEEGKRVVQL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + + + + + +D + YNA V+ +RDY +K+ F Sbjct: 240 KAFEEDIKIFDMEELKNFKELPEIKEDIS-----------WVYNALVVGVRDYCKKSGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ AIAV+ALGKENV + +P +Y+S S DA A+ LG ++ V+ Sbjct: 289 KAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKTDARILAENLGVEFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + + S+ + + ENIQ+RIRGN LM +SN ++LTT NKSE+++ Sbjct: 349 PIEPVFKSYLSVFNGD-NSVIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDMSG P+ D+ KT V++LA + N E+IP SI+EK PSAEL Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYELARYINRE---------REIIPISIIEKVPSAEL 458 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP+Q D++SLPPY ILD+I+K +E S ++ Y++ V+ V + + EYKR+QA Sbjct: 459 RPNQKDEDSLPPYKILDEILKMYIEENRSAKEIIEKGYDERLVKDVINNVNKVEYKRKQA 518 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 G K+T K+FG R PI + F+ Sbjct: 519 APGLKVTTKAFGTGRRMPIVHNFK 542 >gi|257060879|ref|YP_003138767.1| NAD synthetase [Cyanothece sp. PCC 8802] gi|256591045|gb|ACV01932.1| NAD+ synthetase [Cyanothece sp. PCC 8802] Length = 561 Score = 583 bits (1503), Expect = e-164, Method: Composition-based stats. Identities = 225/574 (39%), Positives = 322/574 (56%), Gaps = 42/574 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP +GD+ N K A A Q + L+L EL + GYPP DL+ SFI+ Sbjct: 1 MKIAIAQLNPTIGDLVNNAHKILNAANLAASQNVRLLLTPELSLCGYPPRDLLLYPSFIK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-------EGVLNSVVILDAGNIIAVRDKINL 117 + + + L ++VG + + + NS +L+ G + + K L Sbjct: 61 SLTLELQELAQKLP-SQLAVLVGTVTPNNAAAINGEKPLFNSAALLENGEVKQLFHKCLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVF-------RDIRLGILICEDIWKNS----------NIC 160 PNY F E R F SG + I++G+ ICED+W + N Sbjct: 120 PNYDVFDEHRYFESGKQPNYFELFLDDHSSEPIKIGVTICEDLWNDEQFWQKRHYQQNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 K L G + + +L+ASPYY K K R ++ + +P+IYVNQ+GG DELIFDG S Sbjct: 180 KTLANLGVDLIVNLSASPYYLGKPKLRETMLQHSSKYYQIPLIYVNQIGGNDELIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F + ++ + K F+E + W ++ AS P EEE ++A V Sbjct: 240 FVVNEHGEIVLKAKSFAEDVKIFTW-------NKSFKKIVLASVNNFPNTEEEEIWSALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L ++DY QK F KVI+GLSGGIDSAL AAIA +A+G NV I++P Y+S SL+DA Sbjct: 293 LGVKDYAQKCQFSKVILGLSGGIDSALVAAIATEAIGANNVLGILMPSPYSSDHSLKDAE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 K LG + LPI ++ + +L++ GI EN+Q+RIRGN+LMA++N Sbjct: 353 KLVKNLGINHQTLPISGIMKTYDNLLNPLFSGTQFGIAEENLQARIRGNLLMAIANKFGY 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSEI+VGY TLYGDM+GG + D+ KT+VF L W N H E+I Sbjct: 413 LLLSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTRVFSLCHWLNRHQ---------EII 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVE 519 P +IL K PSAEL+P+QTDQ+SLPPY ILD+I++R + + +SF + +N V+ V Sbjct: 464 PHNILIKPPSAELKPNQTDQDSLPPYEILDEILERRINHHQSFDEICEAGFNANIVQKVL 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 L+ +E+KR+QAP+ K+T K+FG PI++ Sbjct: 524 KLVARAEFKRKQAPLVLKVTDKAFGTGWRMPIAS 557 >gi|254479264|ref|ZP_05092607.1| NAD synthase family protein [Carboxydibrachium pacificum DSM 12653] gi|214034802|gb|EEB75533.1| NAD synthase family protein [Carboxydibrachium pacificum DSM 12653] Length = 543 Score = 583 bits (1503), Expect = e-164, Method: Composition-based stats. Identities = 211/564 (37%), Positives = 317/564 (56%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI N K + E+A + DL++F EL GYPP+D +F K FI+ Sbjct: 1 MKIALAQINPVVGDIKHNCEKIVKYIEKAKEEKADLVVFPELSTVGYPPKDFLFVKDFIK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEF 123 I+ + D I++G R+D+ + NS + II + DK LPNY F Sbjct: 61 TNEEMINKIILPATDE-IAIILGTVRKDENKNLYNSAFFVYNRKIIEIFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEFLFS 173 EKR F + F+ +++ + ICED WK + ++ + K + + Sbjct: 120 DEKRYFSPSSQIKTVEFKGVKVAVNICEDAWKGYVFEPNANYSIDVLEEQFKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPY+ K + R I+ + +P +YVNQVG DELIFDG SF + + + ++ Sbjct: 180 ISASPYHLGKHRTRLGIMKEKTDKYGIPFVYVNQVGANDELIFDGNSFVLNEKGKEVIRL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + E + + + +D + Y A V+ +RDY K F Sbjct: 240 KGFEEDFKVVELQNLEDFEELPELKEDIS-----------WIYKALVIGVRDYFHKLGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ A IA +ALGKENV I +P +Y+S S++DA AK LG + V+ Sbjct: 289 KAVLGLSGGIDSAVVAVIASEALGKENVLAISMPSRYSSEGSVKDAEILAKNLGIDFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + + S+ ++ + EN+Q+RIRGN LM +N ++LTT NKSE+++ Sbjct: 349 PIEPVFKSYLSVFNKD-GNALGDVAEENVQARIRGNYLMFFANREGYVVLTTGNKSELAM 407 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDMSG + DLYKTQV++LA + N E+IP SI++K PSAEL Sbjct: 408 GYCTLYGDMSGSLAVIGDLYKTQVYELARYINRE---------KEIIPVSIIKKVPSAEL 458 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQA 532 RP+Q D++SLPPY ILD ++K +E S ++ ++ + VR++ + + +EYKR+QA Sbjct: 459 RPNQKDEDSLPPYRILDQVLKLYLEENASVEEIAEKGFDKDLVRHIINTVNKNEYKRKQA 518 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 P K++ K+FG R PI F+ Sbjct: 519 PPVLKVSPKAFGIGRRMPIVQNFK 542 >gi|300690788|ref|YP_003751783.1| nh3-dependent nad+ synthetase (nadE) [Ralstonia solanacearum PSI07] gi|299077848|emb|CBJ50486.1| putative nh3-dependent nad+ synthetase (nadE) [Ralstonia solanacearum PSI07] Length = 546 Score = 582 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 220/562 (39%), Positives = 318/562 (56%), Gaps = 31/562 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNAARIVAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLDAT 64 Query: 67 SSAIDTL-KSDTHDGGAGIVVGFPRQDQE---------GVLNSVVILDAGNIIAVRDKIN 116 S A+D L G +++G P+ E N+ + G + K+ Sbjct: 65 SRALDVLVAELAAFPGLHVLIGHPQLSFEAPAPGSALPKPTNTATVAVDGRVRGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPN F EKR F G+ R G++ICED W AE + NA Sbjct: 125 LPNNEVFDEKRYFQVGFEPFVFDVEGTRFGVIICEDAWYPQATAWAKAAG-AEVVLVPNA 183 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + +M F Sbjct: 184 SPYHLDKEDLREQIIGARVKESGLPHVYVNLVGGQDELVFDGGSFVLDSGGKPVARMAQF 243 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + E Y A L +RDY+ KN F I Sbjct: 244 VEGVGYVRFD----------GARPLPGEIAPEATLEAQVYEALKLGVRDYIGKNGFPGAI 293 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 IGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD +PI Sbjct: 294 IGLSGGVDSALVLAIAVDALGTDRVRAVMMPSRYTADISWLDARDMAARLGVRYDEIPIM 353 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + F ++++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE++VGY Sbjct: 354 PMFDAFGGVLAEEFRNLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVGYC 413 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR + Sbjct: 414 TLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELREN 464 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLP Y LD I++R +E + + + + VR + L+ +EYKRRQAPVG Sbjct: 465 QTDQDSLPEYAALDAIVQRYMEQNQPVTDIIAAGFAEADVRKIVRLIKINEYKRRQAPVG 524 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 ++T ++FGRD YPI+++F++ Sbjct: 525 IRVTQRAFGRDWRYPITSRFKE 546 >gi|152979996|ref|YP_001352840.1| NAD synthetase [Janthinobacterium sp. Marseille] gi|151280073|gb|ABR88483.1| NAD+ synthase (glutamine-hydrolysing) [Janthinobacterium sp. Marseille] Length = 537 Score = 582 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 224/556 (40%), Positives = 318/556 (57%), Gaps = 22/556 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +K+AIAQ+N VGD+AGN A+ A QG D++L EL + GYPPEDL+ ++SF Sbjct: 2 TVKVAIAQINSTVGDLAGNRARIAEFSRRAAEQGADIVLTPELSLVGYPPEDLLLRQSFY 61 Query: 64 QAC-SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + + G +VVG P + N+ +L G + K +LPN + Sbjct: 62 AKTTETLLALAADLAPLHGLHVVVGHPFEQDGQRYNAASVLLNGKVAGTYCKHDLPNATV 121 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F S + +R GI ICED W + + GA+ L N SP++ N Sbjct: 122 FDEKRYFTSVDEPLVFEVKGVRFGINICEDTW-FPHAPARAAEAGAQVLLVPNGSPFHMN 180 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R +++ ++ + ++Y N VGGQDELIFDG SF D ++ Q++H E + Sbjct: 181 KQHLRVDVMHANVTVHGMSLVYANLVGGQDELIFDGNSFVLDQAGEIRAQLQHCVEDLQI 240 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E+ Q T+ L E Y A VL +RDY+ KN F +IG+SGG Sbjct: 241 IEFQGGQ----------PVDGTIVEELSVEAQVYKALVLGVRDYIGKNGFPGALIGMSGG 290 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +DSAL A+AVDALG + V+ IM+P YT+ S D+ K +G +YD + I+D F Sbjct: 291 VDSALTLAVAVDALGADKVRAIMMPSPYTAEISWVDSRDMVKRVGVRYDEIGINDCFEAF 350 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + ENIQ+RIRG ILMALSN A++LTT NKSE++VGY TLYGDM Sbjct: 351 NRTLANEFKGLKQDTTEENIQARIRGTILMALSNKHGAIVLTTGNKSEMAVGYCTLYGDM 410 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF LKD+ KT V++L ++RN +++VIP IL ++PSAELRP QTDQ+S Sbjct: 411 AGGFAVLKDIAKTLVYRLCAYRN---------IVSDVIPERILTRAPSAELRPDQTDQDS 461 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD I++ +E +S + Y E V + HL+ +EYKRRQ+PVG ++T + Sbjct: 462 LPPYEVLDAIMQMYMEENQSGVEIIAAGYRPEDVARITHLIKINEYKRRQSPVGIRVTHR 521 Query: 542 SFGRDRLYPISNKFRD 557 +FGRD YPI++KFR+ Sbjct: 522 AFGRDWRYPITSKFRE 537 >gi|20807133|ref|NP_622304.1| NAD synthase [Thermoanaerobacter tengcongensis MB4] gi|20515628|gb|AAM23908.1| NAD synthase [Thermoanaerobacter tengcongensis MB4] Length = 543 Score = 582 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 209/564 (37%), Positives = 318/564 (56%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NPVVGDI N K + E+A ++ DL++F EL GYPP+D +F K FI+ Sbjct: 1 MKIALAQINPVVGDIKHNCEKIVKYIEKAKKEKADLVVFPELSTVGYPPKDFLFVKDFIK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEF 123 I+ + D +++G R+D+ + NS + II + DK LPNY F Sbjct: 61 TNEEMINKIILPATDE-IAVILGTVRKDENKNLYNSAFFVYNRKIIEIFDKTLLPNYDVF 119 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEFLFS 173 EKR F + F+ +++ + ICED WK + ++ + K + + Sbjct: 120 DEKRYFSPSSQIKTVEFKGVKVAVNICEDAWKGYVFEPSANYSVDVLEEQFKLKPDIFIN 179 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 ++ASPY+ K + R I+ + +P +YVNQVG DELIFDG SF + + + ++ Sbjct: 180 ISASPYHLGKHRTRLGIMKEKTDKYGIPFVYVNQVGANDELIFDGNSFVLNEKGKEVIRL 239 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 K F E + E + + + +D + Y A V+ +RDY K F Sbjct: 240 KGFEEDFKVVELQNLEDFEELPELKEDIS-----------WIYKALVIGVRDYFHKLGFK 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ A IA +ALGKENV I +P +Y+S S++DA AK LG + V+ Sbjct: 289 KAVLGLSGGIDSAVVAVIASEALGKENVLAISMPSRYSSEGSVKDAEILAKNLGIDFRVI 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + + S+ ++ + EN+Q+RIRGN LM +N ++LTT NKSE+++ Sbjct: 349 PIEPVFKSYLSVFNKD-GNALGDVAEENVQARIRGNYLMFFANREGYVVLTTGNKSELAM 407 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDMSG + DLYKTQV++LA + N E+IP SI++K PSAEL Sbjct: 408 GYCTLYGDMSGSLAVIGDLYKTQVYELARYINRE---------KEIIPVSIIKKVPSAEL 458 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQA 532 RP+Q D++SLPPY ILD ++K +E S ++ ++ + VR++ + + +EYKR+QA Sbjct: 459 RPNQKDEDSLPPYRILDQVLKLYLEENASVEEIAEKGFDKDLVRHIINTVNKNEYKRKQA 518 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 P +++ K+FG R PI F+ Sbjct: 519 PPVLRVSPKAFGTGRRMPIVQNFK 542 >gi|119490521|ref|ZP_01622963.1| NAD(+) synthetase [Lyngbya sp. PCC 8106] gi|119453849|gb|EAW35005.1| NAD(+) synthetase [Lyngbya sp. PCC 8106] Length = 569 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 215/571 (37%), Positives = 315/571 (55%), Gaps = 31/571 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP VGDI GN + A ++A G L+L TEL + GYPP DL+ + SFI+ Sbjct: 1 MKIAIAQLNPTVGDITGNAQRILDAAKQATEAGCQLLLTTELALVGYPPRDLLNRPSFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-------FPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A + + L + ++VG F +Q ++ + NS ++ + K L Sbjct: 61 AAIAELQVLAAKIPPE-LTVLVGTVQPNSEFEKQGEKPLFNSAALIQNSQVQQFFQKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNS----------NICKHL 163 P Y F E R F G + + +++G+ ICED+W + N K L Sbjct: 120 PTYDVFDEDRYFEGGKQSKYFTLSNSTSSLKIGVTICEDLWNDEEFWGRQNYTCNPMKAL 179 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 ++ + + +L+ASPY +K K R ++ PIIY NQVGG D+LIFDG S F Sbjct: 180 AEKEVDLVVNLSASPYQASKQKLRQAMLGHSAKRYSTPIIYANQVGGNDDLIFDGFSLVF 239 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQL-SQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 + +L + F + E+ +++ +++ P E+E + A VL Sbjct: 240 NKTGELVQYLTGFETDFTVVEFDLEKRDVITSDWVKSLDQPQSSFPESEDEEIWLALVLG 299 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RDY++K F +V++GLSGGIDS+L AAIA +A+GKENV +++P Y+S S+ DA Sbjct: 300 VRDYLRKCGFSQVVLGLSGGIDSSLVAAIAAEAVGKENVLGVLMPSPYSSEHSVTDAVEL 359 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG L I + + F ++ GI ENIQSRIRG +LMA+SN +L Sbjct: 360 AENLGINTKTLAIAEAMKAFDQVLEPVFAGTEFGIAEENIQSRIRGTLLMAISNKFGHLL 419 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L+T NKSE++VGY TLYGDM+GG + D+ K +V+ + W N H E+IP Sbjct: 420 LSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKIRVYSICKWLNQHSN-------KEIIPN 472 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHL 521 +IL K SAEL+P Q D +SLPPY ILDDI+ R+VE +ES ++ E V+ V L Sbjct: 473 NILTKPASAELKPGQMDSDSLPPYEILDDILHRLVEKQESVSQIIAAGHDSEIVQQVVKL 532 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 + +E+KRRQAP G KI+ ++FG PI+ Sbjct: 533 VMRAEFKRRQAPPGLKISDRAFGTGWRMPIA 563 >gi|300783141|ref|YP_003763432.1| NAD+ synthase (glutamine-hydrolysing) [Amycolatopsis mediterranei U32] gi|299792655|gb|ADJ43030.1| NAD+ synthase (glutamine-hydrolysing) [Amycolatopsis mediterranei U32] Length = 573 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 216/579 (37%), Positives = 321/579 (55%), Gaps = 32/579 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ+NP VGD+ GN A G +++F E+ ++GYP EDL +K+ Sbjct: 1 MPQLRIALAQVNPTVGDLDGNADLHVEWTRRAAEAGAHVVVFPEMSLTGYPIEDLSLRKT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIV---VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F A +++L + G G V VG+ D G ++ L G I+A + K +LP Sbjct: 61 FAAASRQGLESLARRLDEAGCGEVLTYVGYLDLDDVGPRDAAAALYRGEIVARQFKHHLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F E R + G + D + F + +G++ICED+W++ L + G + + + NASP Sbjct: 121 NYGVFDEHRWYKPGTTLDVVRFHGLDIGMVICEDLWQDGGPISALGRAGVDLVVAPNASP 180 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y +K ++R ++ + + P++Y NQ+GGQD+L+FDG S L + F E Sbjct: 181 YERSKDEQRLPLIARRAAEAGAPLVYTNQIGGQDDLVFDGDSLVVGADGTLLARAPQFVE 240 Query: 239 QNFMTEWHYDQQ-------------------LSQWNYMSDDSASTMYIPLQEEEADYNAC 279 + + + + + PL +E ++A Sbjct: 241 HLLVLDMDLPKTGYAGDGSYEGLHVRRHVLSEEPLPAYEPTATPVISEPLSDEAEVWHAL 300 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V+ LRDYV KN F VI G SGGIDSA+CAA+A DALG NV + +P KY+S S +DA Sbjct: 301 VIGLRDYVHKNGFSSVIFGFSGGIDSAVCAALAADALGGGNVYGVSMPSKYSSGHSKDDA 360 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A A+ +G Y V P+ D+V + +S +G+ ENIQ+R RG +LMALSN Sbjct: 361 ADLAQRIGAHYRVEPVEDMVRVYVDQLS------LTGLAEENIQARTRGMLLMALSNLDG 414 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++L T NK+E++VGY T+YGD G F P+KD++KT V+QLA WRN G P Sbjct: 415 HLVLATGNKTELAVGYSTIYGDAVGAFAPIKDVFKTHVWQLARWRNDTAAKRGETP---P 471 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + + K PSAELRP Q D +SLP Y +LDDI+ VE + + + ++ ET+ V Sbjct: 472 IPENSITKPPSAELRPGQVDTDSLPDYALLDDILDDYVEGDRGYADLVSAGFDPETIDRV 531 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ +EYKRRQ P GTKIT K+FGRDR P++N +R+ Sbjct: 532 VRMVDKAEYKRRQYPPGTKITFKAFGRDRRLPMTNLWRE 570 >gi|58581218|ref|YP_200234.1| NAD synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425812|gb|AAW74849.1| NH3-dependent NAD synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 552 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 221/566 (39%), Positives = 313/566 (55%), Gaps = 26/566 (4%) Query: 1 MLK------KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPP 53 M++ L+IA+AQ + VG + N + A + D++LF EL ISGYPP Sbjct: 1 MMESAVTAHTLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFEADIVLFPELAISGYPP 60 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 EDL+ + F+ C A+ + + T G VVG+P+ V N+ +L G I A Sbjct: 61 EDLLLRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYR 118 Query: 114 KINLPNYSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 K LPNY+ F E+R F N + + +++G++ICED+W + + K GAE + Sbjct: 119 KRELPNYAVFDERRYFDVDPDGENCVVTVKGVQVGVVICEDLW-FAEPLANTVKAGAELV 177 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 178 LVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHP 237 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F +Q + ++ ++ DD +M + A V L+DY KN Sbjct: 238 AAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCSKNG 291 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + Sbjct: 292 FSKVWLGLSGGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLE 351 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + I EN+QSR RG ILMALSN ++LTT NKSE Sbjct: 352 TVAIEPAFEGLLAALGPLFAGTEPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEY 411 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN+ VIPP+++ + PSA Sbjct: 412 AVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRNTVDG-------APVIPPAVISRPPSA 464 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELR +QTDQ+SLPPY +LD I+ R V+ E+S + Y ETV +V L+ +E+KR Sbjct: 465 ELRDNQTDQDSLPPYDVLDAILYRYVDQEQSRDDIVAAGYAAETVEHVLRLVRLNEWKRH 524 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 Q+ G K++ ++FGR+R YPI+N +R Sbjct: 525 QSAPGPKVSRRAFGRERRYPITNGYR 550 >gi|145595855|ref|YP_001160152.1| NAD+ synthetase [Salinispora tropica CNB-440] gi|145305192|gb|ABP55774.1| NH(3)-dependent NAD(+) synthetase [Salinispora tropica CNB-440] Length = 598 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 222/593 (37%), Positives = 323/593 (54%), Gaps = 46/593 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q+NP VGD+AGN R A G LI F EL ++GYP EDLVF++S Sbjct: 1 MTTLRLALCQVNPNVGDLAGNATIIREWARRAADAGAQLIAFPELTLTGYPVEDLVFRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ-----------EGVLNSVVILDAGN 107 F+ A +A+D L +D G G +VVG+ D G N+ +L G Sbjct: 61 FVAASKAALDELAADLAADGLGDLAVVVGYLDADGPPQVNGDAEPGHGARNAAALLHGGK 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 +A K +LPNY F E R F+ G + + + + + ICED+W+ ++ G Sbjct: 121 TVATYFKHHLPNYGVFDEDRYFVPGETLSVVRVGGVDVTLTICEDLWQVGGPFAAARQAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + ++N SPY NK R +V + + I YVN VGGQDEL+F+G S + Sbjct: 181 VGLVLNINGSPYELNKDDVRLPLVRRRAAEAKATIAYVNMVGGQDELVFEGDSMIVAAEG 240 Query: 228 QLAFQMKHFSEQNFMTEWHY--------------DQQLSQWNYM--------SDDSASTM 265 +L + F E + + D + +AS + Sbjct: 241 ELLARAPQFVEHLLVHDLDLPAAADGPPADIELADGMRVLHRCIGSLPAAPTDTLAASEI 300 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 P +E + A +L LRDYV KN+F V++GLSGGIDS++ AA+AVDALG + V + Sbjct: 301 AEPAADEAEVWQALLLGLRDYVDKNHFPSVVLGLSGGIDSSVVAALAVDALGADRVVGVS 360 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 LP +++S S EDAA AK G Y + PI +V F + +S SG+ EN+Q+R Sbjct: 361 LPSQHSSEHSREDAAELAKRTGLDYRIEPIQPIVETFLANLS------LSGLSVENLQAR 414 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +RG ILMALSN ++LTT NKSE++VGY TLYGD GGFNP+KD++KT ++QLA WRN Sbjct: 415 VRGVILMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGFNPVKDVWKTLIWQLARWRN 474 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 + + G P IP + + K PSAEL P Q D ++LP Y +LD I+ ++ + Sbjct: 475 AEAVRRGETP---PIPENSISKPPSAELSPGQLDSDTLPEYDLLDPILVGYIDGDLGRDG 531 Query: 506 -NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + ++ V V ++ +EYKRRQ+ GTKI+ K+FGRDR PI+N++R+ Sbjct: 532 LIEAGHDPALVDQVLRMVDTAEYKRRQSAPGTKISMKAFGRDRRLPITNRWRE 584 >gi|294084249|ref|YP_003551007.1| glutamine-dependent NAD(+) synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663822|gb|ADE38923.1| Glutamine-dependent NAD(+) synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 561 Score = 581 bits (1498), Expect = e-163, Method: Composition-based stats. Identities = 240/559 (42%), Positives = 337/559 (60%), Gaps = 13/559 (2%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 K + IA+AQLN +G+IA N+ ARE+AN G D+I+ E+F+SGYP +DLV + F Sbjct: 4 KPISIALAQLNSHLGNIAANVECLIDAREKANAGGADIIVTPEMFLSGYPCDDLVLRSDF 63 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 + ++ I L T DGGA I+VG P ++Q+G + NSV +LD G II RDK+NLP Sbjct: 64 MHEVAAGIARLTQVTADGGAAIIVGAPYREQDGDVVRIYNSVFVLDDGKIIGRRDKVNLP 123 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F +KR F +G P++ R ++LG+ +CEDIW ++ + L++ GA+ + SLNASP Sbjct: 124 NYGVFDDKRNFTAGAMPGPVLVRGLKLGLPVCEDIWTP-DVVECLQESGADMIVSLNASP 182 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 + K +R + LP++YVN +GGQDEL+FDG SF + LA + FS+ Sbjct: 183 FDSRKNDQRMAHAVSRTIESSLPLLYVNLIGGQDELVFDGGSFALNADGNLATHLPSFSQ 242 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 + D + + + P ++ A Y +L +RDYVQKN F V++G Sbjct: 243 AVVQVQVKSD-------FGALSLTGQITPPDEDLAAIYRGLMLGVRDYVQKNGFPGVVLG 295 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL AAIA DALG + V +M+P YTS +SLEDAA A G + D + I Sbjct: 296 LSGGIDSALVAAIAADALGADAVHAVMMPSPYTSDESLEDAADLASRFGMRLDTISIGPA 355 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + +++ + I ENIQSR+RG ILM +SN + AM++ T NKSE + GY TL Sbjct: 356 MAAMDEMLADQFAGKDPDIAEENIQSRLRGTILMGISNKNGAMVMATGNKSEYAAGYSTL 415 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GGF P+KD++K QVF L WRN++ GP EVIP I++K PSAELRP Q Sbjct: 416 YGDMCGGFAPIKDVWKVQVFDLCHWRNANLPRGAAGPEGEVIPKRIIDKPPSAELRPDQK 475 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D +SLPPY LD I++ + E+ Q Y+ + V LL+ +E+KR QA G K Sbjct: 476 DTDSLPPYERLDAIMQALTEDAADIDAIVAQGYDIKEVAQASQLLFRAEFKRFQAAPGPK 535 Query: 538 ITAKSFGRDRLYPISNKFR 556 +T+ +FGRDR P+++ F Sbjct: 536 MTSIAFGRDRRLPLTSGFS 554 >gi|241663744|ref|YP_002982104.1| NAD synthetase [Ralstonia pickettii 12D] gi|240865771|gb|ACS63432.1| NAD+ synthetase [Ralstonia pickettii 12D] Length = 545 Score = 581 bits (1498), Expect = e-163, Method: Composition-based stats. Identities = 221/564 (39%), Positives = 320/564 (56%), Gaps = 30/564 (5%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 + +A+AQ+N VGD AGN ++ A EA++ G ++L EL ++GYPPEDL+ + +FI Sbjct: 2 TVSVALAQINCTVGDFAGNASRIVAAAREAHQAGARILLTPELSLTGYPPEDLLLRPAFI 61 Query: 64 QACSSAIDTL-KSDTHDGGAGIVVGFP----RQDQEGVL----NSVVILDAGNIIAVRDK 114 A + A+D L G +++G P GVL NSV + G ++ +K Sbjct: 62 DASARALDALIAELAAFPGLHVLIGHPQLSLEAPAPGVLPKPTNSVTVAVDGRVVGRYNK 121 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 + LPN F EKR F G R G++ICED W + A+ + Sbjct: 122 LELPNNEVFDEKRYFQPGTEPFVFEVDGTRFGVIICEDAWYATATAYAKAAG-AQVVLIP 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 NASPY+ +K R I+ ++ LP +Y N VGGQDEL+FDG SF D + + +M Sbjct: 181 NASPYHLDKEDLRERIIGARVKESGLPHVYANLVGGQDELVFDGGSFVLDAEGNVVVRMG 240 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E ++ T+ E Y A L +RDY+ KN F Sbjct: 241 QFVEGVGYVQFD----------GGRALPGTIVPEASLEAQVYEALKLGVRDYLGKNGFPG 290 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 IIGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD + Sbjct: 291 AIIGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWVDARDMAARLGVQYDEIA 350 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I + + F +++ + P ENIQ+RIRG +LMALSN S ++LTT NKSE++VG Sbjct: 351 ISPMFDAFKGALAEDFRGLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVG 410 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR Sbjct: 411 YCTLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELR 461 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAP 533 +QTDQ+SLP Y LD I++R +E + + + + V+ + L+ +EYKRRQAP Sbjct: 462 ENQTDQDSLPEYDALDAIVQRYMEQNQPVADIIADGFAEADVQKIVRLIKINEYKRRQAP 521 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 VG ++T ++FGRD YPI+++F++ Sbjct: 522 VGIRVTQRAFGRDWRYPITSRFKE 545 >gi|325929041|ref|ZP_08190196.1| DNA-directed RNA polymerase, subunit H [Xanthomonas perforans 91-118] gi|325540574|gb|EGD12161.1| DNA-directed RNA polymerase, subunit H [Xanthomonas perforans 91-118] Length = 551 Score = 581 bits (1498), Expect = e-163, Method: Composition-based stats. Identities = 219/557 (39%), Positives = 311/557 (55%), Gaps = 20/557 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSF 62 L+IA+AQ + VG + N + A + D++LF EL ISGYPPEDL+ + F Sbjct: 9 TLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFEADIVLFPELAISGYPPEDLLLRPGF 68 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + C A+ + + T G VVG+P+ V N+ +L G I A K LPNY+ Sbjct: 69 LAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPNYAV 126 Query: 123 FHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F N + + + +G++ICED+W + + + GAE + NASPY Sbjct: 127 FDERRYFDVDPDGENCVVTVKGVHVGVVICEDLW-FAEPLANTVRAGAELVLVPNASPYE 185 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ + I Y+N VGGQD L+FDGAS DG + F +Q Sbjct: 186 RGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVDQW 245 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ ++ DD +M + A V L+DY +KN F KV +GLS Sbjct: 246 LVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCRKNGFSKVWLGLS 299 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 300 GGIDSALVLAMAVDALGGDNVTAVRLPSRYTATLSNDLADEQCRALGVKLETIAIEPAFE 359 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T+YG Sbjct: 360 GLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYATIYG 419 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +QTDQ Sbjct: 420 DMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRANQTDQ 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Q+ G K++ Sbjct: 473 DSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRHQSAPGPKVS 532 Query: 540 AKSFGRDRLYPISNKFR 556 ++FGR+R YPI+N +R Sbjct: 533 RRAFGRERRYPITNGYR 549 >gi|271964118|ref|YP_003338314.1| NAD(+) synthase [Streptosporangium roseum DSM 43021] gi|270507293|gb|ACZ85571.1| NAD(+) synthase (glutamine-hydrolyzing) [Streptosporangium roseum DSM 43021] Length = 597 Score = 581 bits (1498), Expect = e-163, Method: Composition-based stats. Identities = 224/598 (37%), Positives = 319/598 (53%), Gaps = 47/598 (7%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L+IA+AQ +PVVGD+A N K A +G L++FTE+F++GYP EDLV + SF+ Sbjct: 6 QLRIALAQTDPVVGDLAANADKLVEWTRRAAGRGAHLVVFTEMFLTGYPVEDLVLRSSFV 65 Query: 64 QACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ---------EGVLNSVVILDAGNIIAV 111 +A ++A++ L D G G VVG+ + L++ +L G ++ Sbjct: 66 EASTAAVEALARRLADEGLGEIPAVVGYVDRADLAPRVGQPKGAPLDAAALLHRGRVVTK 125 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 K +LPNY F E R F+ G + + I +CED+W+ + + GA L Sbjct: 126 TAKHHLPNYGVFDEYRYFVRGDRLPIFRLHGVDVAIAVCEDLWQEGGPVAVVAEAGAGLL 185 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K R +V+ + + Y NQVGGQDEL+FDG S +L Sbjct: 186 VVPNASPYEKEKDDVRLALVSRRAREAGCALAYANQVGGQDELVFDGDSIIVSASGELVA 245 Query: 232 QMKHFSEQNFMTEWHYDQQL------------------------SQWNYMSDDSASTMYI 267 + F+E+ +T+ + S + Sbjct: 246 RAAQFAEELLVTDLELPEARFGGLGTFQVDAGDGTVITVERLELSAFPVEPYAPEPPSIA 305 Query: 268 PL-QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P + Y+A VL++RDYV KN F VI+GLSGGIDSAL A IA DA+G + V +M+ Sbjct: 306 PHLDDIAEVYSALVLAVRDYVAKNGFQSVILGLSGGIDSALTATIASDAIGPDRVHVVMM 365 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +Y+S SLEDA G ++PI D+V+ F + E SG+ AEN+Q+R+ Sbjct: 366 PSRYSSEHSLEDAWELVNRQGVNARIVPIADIVDSFEKEI------ELSGLAAENLQARV 419 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG ILM LSN ++LTT NKSE++ GY TLYGD +GGF P+KD+ KT V++L+ WRN+ Sbjct: 420 RGMILMGLSNQHGHLVLTTGNKSELATGYSTLYGDSAGGFAPIKDVLKTLVWKLSRWRNA 479 Query: 447 HGITSG---LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE-S 502 SG G IP + +EK PSAELRP Q D +SLP Y +LD ++ VE + S Sbjct: 480 QAGRSGAFLHGFAVPPIPENSIEKEPSAELRPDQRDTDSLPEYDVLDRLLDDYVEKDMGS 539 Query: 503 FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 ++ V + L+ +EYKRRQ P G KIT K+FGRDR PI+N +R+ I+ Sbjct: 540 AELIAAGHDPALVARIIRLVDLAEYKRRQYPPGPKITPKNFGRDRRLPITNHWRETIA 597 >gi|84623136|ref|YP_450508.1| NAD synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367076|dbj|BAE68234.1| NH3-dependent NAD synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 551 Score = 581 bits (1498), Expect = e-163, Method: Composition-based stats. Identities = 220/557 (39%), Positives = 310/557 (55%), Gaps = 20/557 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSF 62 L+IA+AQ + VG + N + A + D++LF EL ISGYPPEDL+ + F Sbjct: 9 TLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFEADIVLFPELAISGYPPEDLLLRPGF 68 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + C A+ + + T G VVG+P+ V N+ +L G I A K LPNY+ Sbjct: 69 LAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPNYAV 126 Query: 123 FHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F N + + +++G++ICED+W + + K GAE + NASPY Sbjct: 127 FDERRYFDVDPDGENCVVTVKGVQVGVVICEDLW-FAEPLANTVKAGAELVLVPNASPYE 185 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ + I Y+N VGGQD L+FDGAS DG + F +Q Sbjct: 186 RGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVDQW 245 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ ++ DD +M + A V L+DY KN F KV +GLS Sbjct: 246 LVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCSKNGFSKVWLGLS 299 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 300 GGIDSALVLAMAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETVAIEPAFE 359 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T+YG Sbjct: 360 GLLAALGPLFAGTEPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYATIYG 419 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+ PLKDLYKT+VF LA WRN+ VIPP+++ + PSAELR +QTDQ Sbjct: 420 DMCGGYAPLKDLYKTEVFGLAKWRNTVDG-------APVIPPAVISRPPSAELRDNQTDQ 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I+ R V+ E+S + Y ETV +V L+ +E+KR Q+ G K++ Sbjct: 473 DSLPPYDVLDAILYRYVDQEQSRDDIVAAGYAAETVEHVLRLVRLNEWKRHQSAPGPKVS 532 Query: 540 AKSFGRDRLYPISNKFR 556 ++FGR+R YPI+N +R Sbjct: 533 RRAFGRERRYPITNGYR 549 >gi|78048901|ref|YP_365076.1| NAD synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037331|emb|CAJ25076.1| NAD(+) synthase (glutamine-hydrolyzing) [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 547 Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats. Identities = 218/557 (39%), Positives = 312/557 (56%), Gaps = 20/557 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSF 62 L+IA+AQ + VG + N + A + D++LF EL ISGYPPEDL+ + F Sbjct: 5 TLRIAMAQFDFPVGGVTQNTDRIIEYIAAARDEFEADIVLFPELAISGYPPEDLLLRPGF 64 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + C A+ + + T G VVG+P+ V N+ +L G I A K LPNY+ Sbjct: 65 LAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPNYAV 122 Query: 123 FHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F + + + +++G++ICED+W + + + GAE + NASPY Sbjct: 123 FDERRYFDVDPDGESCVVTVKGVQVGVVICEDLW-FAEPLANTVRAGAELVLVPNASPYE 181 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ + I Y+N VGGQD L+FDGAS DG + F +Q Sbjct: 182 RGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVDQW 241 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ ++ DD +M + A V L+DY +KN F KV +GLS Sbjct: 242 LVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCRKNGFSKVWLGLS 295 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A+AVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 296 GGIDSALVLAMAVDALGGDNVTAVRLPSRYTATLSNDLADEQCRALGVKLETIAIEPAFE 355 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T+YG Sbjct: 356 GLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYATIYG 415 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +QTDQ Sbjct: 416 DMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRANQTDQ 468 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Q+ G K++ Sbjct: 469 DSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRHQSAPGPKVS 528 Query: 540 AKSFGRDRLYPISNKFR 556 ++FGR+R YPI+N +R Sbjct: 529 RRAFGRERRYPITNGYR 545 >gi|269127318|ref|YP_003300688.1| NAD+ synthetase [Thermomonospora curvata DSM 43183] gi|268312276|gb|ACY98650.1| NAD+ synthetase [Thermomonospora curvata DSM 43183] Length = 591 Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats. Identities = 216/597 (36%), Positives = 308/597 (51%), Gaps = 49/597 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ+NP VGD+ GN A G L+ F E+ ++GYP EDL + S Sbjct: 1 MAQLRLALAQVNPTVGDLEGNADLIVEWTRRAAEAGAHLVAFPEMMLTGYPVEDLALRTS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF----------PRQDQEGVLNSVVILDAGNI 108 F++A ++ + D G G +V G+ P + LN++ L G + Sbjct: 61 FVEASQRTLEQVARRLADAGLGDLPVVTGYLDRRADAPARPGRPAGAPLNALAWLHRGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + I + +ICED+W++ + GA Sbjct: 121 AVRSAKHHLPNYGVFDEFRYFVPGDRLPAVRVAGIDVAAVICEDLWQDGGPVSVTRAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +N SPY +K R E+ + + YVN VGGQDEL+FDG S + Sbjct: 181 GLLLVINGSPYERSKDDVRLELAARRAREAGCTLAYVNMVGGQDELVFDGDSMIVGPDGR 240 Query: 229 LAFQMKHFSEQNFMTEWHY-----DQQLSQWNYMSDDSA---------STMYIPLQEEEA 274 L + F+E+ + + + + + D A S +P E Sbjct: 241 LLARAPRFTEELLVADLQLPEAGSEPLPREQPVRAADGATITVERTVLSPHPVPPYEAVP 300 Query: 275 D------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ 322 Y A VL +RDYV+KN F VI GLSGGIDSAL A IA DA+G ENV Sbjct: 301 PPVAPPMDDLAEVYAALVLGVRDYVRKNGFRSVICGLSGGIDSALVATIAADAIGAENVH 360 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI 382 ++LP +Y+S S+ DA K G + +PI+ +V F + PSG+ EN+ Sbjct: 361 VVLLPSRYSSGHSVADAEELVKRQGLQARTVPINPMVEAFERELH------PSGLAEENL 414 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 Q+R+R + MALSN ++LTT NKSE++ GY TLYGD +GGF P+KD+ KT V+ LA Sbjct: 415 QARVRAVVWMALSNQHGHLVLTTGNKSELATGYSTLYGDSAGGFGPIKDVTKTMVWALAR 474 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES 502 WRN + +G P IP I++K PSAELRP Q D +SLP Y +LD ++ VE + Sbjct: 475 WRNEQAVAAGQVP---PIPQQIIDKPPSAELRPGQLDTDSLPEYHVLDALLDDYVERDMG 531 Query: 503 FIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 ++ V V L+ +EYKRRQ P G KIT K+FGRDR PI+N++R+ Sbjct: 532 RDALIAAGHDPALVERVIRLVDRAEYKRRQYPPGPKITGKNFGRDRRLPITNRWREP 588 >gi|330825694|ref|YP_004388997.1| NAD+ synthetase [Alicycliphilus denitrificans K601] gi|329311066|gb|AEB85481.1| NAD+ synthetase [Alicycliphilus denitrificans K601] Length = 552 Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats. Identities = 224/558 (40%), Positives = 315/558 (56%), Gaps = 19/558 (3%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 I+IAQLN VVGD+ GN K A ++ G L+L EL I GY EDL + +F+ AC Sbjct: 5 ISIAQLNFVVGDLQGNAQKIIDAARQSYAAGARLLLTPELAICGYAAEDLFLRPAFLAAC 64 Query: 67 SSAIDTLKSDTHDG-GAGIVVGFPRQDQ------EGVLNSVVILDAGNIIAVRDKINLPN 119 A+ + T D G IV+G PR LN+ +L AG + K LPN Sbjct: 65 DEAVQAVARGTADLAGLAIVLGHPRAAAPGAPAFSSCLNAASVLRAGRVEQTYAKRELPN 124 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y F E+R F++G + +R+G+LICED W ++ +NASP+ Sbjct: 125 YQVFDERRYFVAGDAPCVFEVEGVRVGLLICEDAWFSAPARDAAAAGAQLL-AVINASPF 183 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K +R + + +++ LP++Y + VGGQDE++F+G SF + +A + F E+ Sbjct: 184 HLGKGAEREQTMRERVAETGLPLVYAHLVGGQDEVVFEGRSFALNADGTVAMRAPAFEEK 243 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + H Q + + + E ++A VL +RDYV KN F ++GL Sbjct: 244 LVFAQVHQAQAGIEME-------ADVAPERSLEADLWDALVLGVRDYVGKNGFPGALLGL 296 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALG + V+T+M+P YT+ S DA A LG +YD + I Sbjct: 297 SGGIDSALVLAIAVDALGADKVRTVMMPSPYTADISWIDARDMAARLGVRYDEIAIAPQF 356 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + ++ + EN+Q+RIRG +LMALSN A++LTT NKSE++ GY TLY Sbjct: 357 EAFKAALAPLFEGRAEDTTEENLQARIRGTLLMALSNKFGAVVLTTGNKSEMATGYCTLY 416 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF +KD+ KT+VF LA WRN++ G IP I+ + PSAELRP Q D Sbjct: 417 GDMAGGFAVIKDVVKTRVFDLARWRNANDP---YGTGANPIPERIIIRPPSAELRPDQKD 473 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLPPY +LD I+ R +EN+E + Y+ V V L+ +EYKRRQAPVG ++ Sbjct: 474 QDSLPPYEVLDAILARYMENDEPVEDIVRAGYDRADVERVTRLIKINEYKRRQAPVGVRV 533 Query: 539 TAKSFGRDRLYPISNKFR 556 T +SFG+D YPI+NKFR Sbjct: 534 TRRSFGKDWRYPITNKFR 551 >gi|299066056|emb|CBJ37237.1| putative nh3-dependent nad+ synthetase (nadE) [Ralstonia solanacearum CMR15] Length = 565 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 218/562 (38%), Positives = 316/562 (56%), Gaps = 31/562 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 24 VALAQINCTVGDLAGNAARIVAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLDAA 83 Query: 67 SSAIDTL-KSDTHDGGAGIVVGFPR---------QDQEGVLNSVVILDAGNIIAVRDKIN 116 S A+D L G +++G P+ N+ + G ++ K+ Sbjct: 84 SRALDALVAELAAFAGLHVLIGHPQLLFEAPAPGSALPKPTNTATVAVDGRVLGQYHKLE 143 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPN F EKR F G R G+++CED W A+ + NA Sbjct: 144 LPNNEVFDEKRYFQVGGEPFVFDVEGTRFGVIVCEDAWYPQATAWAKAAG-AQVVLIPNA 202 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + A +M F Sbjct: 203 SPYHLDKEDLREQIIGARVQESGLPHVYVNLVGGQDELVFDGGSFVLDAHGKPAVRMAQF 262 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + E Y A L +RDY+ KN F I Sbjct: 263 VEGVGYVRFD----------GARPLPGEIAPEATLEAQVYEALKLGVRDYIGKNGFPGAI 312 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 IGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA LG +YD LPI Sbjct: 313 IGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWLDARDMVARLGVRYDELPIM 372 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + F +S+ ++ P ENIQ+RIRG +LMALSN S ++LTT NKSE++VGY Sbjct: 373 PMFDAFRGALSEEFRDLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVGYC 432 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR + Sbjct: 433 TLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELREN 483 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLP Y LD I++R +E + + + V+ + L+ +EYKRRQAPVG Sbjct: 484 QTDQDSLPEYDALDAIVQRYMEQNQPVAEIIAAGFAEADVQKIVRLIKINEYKRRQAPVG 543 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 ++T ++FGRD YPI+++F++ Sbjct: 544 IRVTQRAFGRDWRYPITSRFKE 565 >gi|218247801|ref|YP_002373172.1| NAD synthetase [Cyanothece sp. PCC 8801] gi|218168279|gb|ACK67016.1| NAD+ synthetase [Cyanothece sp. PCC 8801] Length = 561 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 225/574 (39%), Positives = 322/574 (56%), Gaps = 42/574 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP +GD+ N K A A Q + L+L EL + GYPP DL+ SFI+ Sbjct: 1 MKIAIAQLNPTIGDLVNNAHKILNAANLAASQNVRLLLTPELSLCGYPPRDLLLYPSFIK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-------EGVLNSVVILDAGNIIAVRDKINL 117 + + + L ++VG + + + NS +L+ G + + K L Sbjct: 61 SLTLELQELAQKLP-SQLAVLVGTVTPNNAAAINGEKPLFNSAALLENGEVKQLFHKCLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVF-------RDIRLGILICEDIWKNS----------NIC 160 PNY F E R F SG + I++G+ ICED+W + N Sbjct: 120 PNYDVFDEHRYFESGKQPNYFELFLDDHSSEPIKIGVTICEDLWNDEQFWQKRHYQQNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 K L G + + +L+ASPYY K K R ++ + +P+IYVNQ+GG DELIFDG S Sbjct: 180 KTLANLGVDLIVNLSASPYYLAKPKLRETMLQHTSKYYQIPLIYVNQIGGNDELIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F + ++ + K F+E + W ++ AS P EEE ++A V Sbjct: 240 FVVNEHGEIVLKAKSFAEDVKIFTW-------NKSFKKIVLASVNNFPNTEEEEIWSALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L ++DY QK F KVI+GLSGGIDSAL AAIA +A+G NV I++P Y+S SL+DA Sbjct: 293 LGVKDYAQKCQFSKVILGLSGGIDSALVAAIATEAIGANNVLGILMPSPYSSDHSLKDAE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 K LG + LPI ++ + +L++ GI EN+Q+RIRGN+LMA++N Sbjct: 353 KLVKNLGINHQTLPISGIMKTYDNLLNPLFSGTQFGIAEENLQARIRGNLLMAIANKFGY 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSEI+VGY TLYGDM+GG + D+ KT+VF L W N H E+I Sbjct: 413 LLLSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTRVFSLCHWLNRHQ---------EII 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVE 519 P +IL K PSAEL+P+QTDQ+SLPPY ILD+I++R + + +SF + +N V+ V Sbjct: 464 PHNILIKPPSAELKPNQTDQDSLPPYEILDEILERRINHHQSFDEICEAGFNANIVQKVL 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 L+ +E+KR+QAP+ K+T K+FG PI++ Sbjct: 524 KLVARAEFKRKQAPLVLKVTDKAFGTGWRMPIAS 557 >gi|296139215|ref|YP_003646458.1| NAD+ synthetase [Tsukamurella paurometabola DSM 20162] gi|296027349|gb|ADG78119.1| NAD+ synthetase [Tsukamurella paurometabola DSM 20162] Length = 582 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 218/590 (36%), Positives = 308/590 (52%), Gaps = 42/590 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A Q+NPVVGD+ N+++ A +A +G + +F E+ ++GYP EDL+ ++S Sbjct: 1 MTPLRVAACQINPVVGDLDANVSRITAAARDAAERGAQVAVFGEMALTGYPVEDLLLRRS 60 Query: 62 FIQACSSAIDTLK---SDTHDGGAGIVVGFPRQDQE----------GVLNSVVILDAGNI 108 F A+ L G +VVGF +D + G N+ +L G + Sbjct: 61 FAVDSREAVHDLAHSLDAAGCGDLIVVVGFLDRDPDAPETSTNPTGGARNAAGVLHRGEL 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 +A DK LPNY F EKR F G + +RLG+ ICED+W L + G Sbjct: 121 VARYDKHFLPNYGVFDEKRWFTPGDRLVVLDVDGVRLGLAICEDVWWPDGPVAGLGELGV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ- 227 + + LNASP+ K ++R E+V +++ P+IYVN VGGQDEL+FDG SF F + Sbjct: 181 DAVLCLNASPFEVGKPEQRREVVAQRVAEGGAPVIYVNLVGGQDELVFDGDSFVFGPEGA 240 Query: 228 -----------QLAFQMKHFSEQNFMTE-WHYDQQLSQWNYMSDDSASTMYIPL-QEEEA 274 QL E E W + P E Sbjct: 241 PATGPQFVEFTQLVDVSPRGREHATTVEGWQVESLALAARPTPLAPQVVTDWPELDEYAQ 300 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 + A V RDYV K V +G+SGGIDSAL A IA DA+G +NV + +P KY+S Sbjct: 301 IWAALVTGTRDYVHKVGGSTVALGMSGGIDSALVAVIAADAVGADNVYGVGMPSKYSSDH 360 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 S +DAA A+ +G + PI +V F + +G+ ENIQ+R RG LM+L Sbjct: 361 SKDDAADQAQRMGIHFRFEPIEHMVESFVGQLH------LTGLAEENIQARCRGMTLMSL 414 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN ++L T NKSE++VGY T+YGD G + P++D+ K+ V+ LA WRN + G Sbjct: 415 SNLDGHLVLATGNKSELAVGYSTIYGDAVGAYAPIRDVEKSLVWDLARWRNKLAVERGET 474 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND------Q 508 P IP + + K PSAELRP Q D +SLP Y ILDDI++R VE ++ Sbjct: 475 P---PIPENSITKEPSAELRPGQKDSDSLPDYEILDDILRRYVEQDQGVAEIAADGNNGA 531 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 Y + +R V L+ +EYKRRQ P+G KIT K+FGRDR PI+N++ D Sbjct: 532 GYEPDLIRTVARLVDRAEYKRRQYPLGPKITPKAFGRDRRMPITNRWHDP 581 >gi|188990496|ref|YP_001902506.1| putative bifunctional NAD(+) synthase (glutamine-hydrolyzing) / nitrilase [Xanthomonas campestris pv. campestris str. B100] gi|167732256|emb|CAP50448.1| putative bifunctional NAD(+) synthase (glutamine-hydrolyzing) / nitrilase [Xanthomonas campestris pv. campestris] Length = 552 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 221/566 (39%), Positives = 313/566 (55%), Gaps = 26/566 (4%) Query: 1 MLK------KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPP 53 M++ L+IA+AQ + VG + N + A + D++LF EL ISGYPP Sbjct: 1 MMESAVTAHTLRIAMAQFDFPVGAVTQNTDRIIEYIAAARDEFDADIVLFPELAISGYPP 60 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 EDL+ + F+ C A+ + + T G VVG+P+ V N+ +L G I A Sbjct: 61 EDLLLRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLREGRIEATYR 118 Query: 114 KINLPNYSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 K LPNY+ F E+R F N + + +++G++ICED+W + + GAE + Sbjct: 119 KRELPNYAVFDERRYFDVDPDGDNCVVTVKGVQVGVVICEDLW-FAEPLAKTVQAGAELV 177 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 178 LVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHP 237 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F +Q + ++ ++ DD +M + A V L+DY KN Sbjct: 238 AAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLKDYCGKNG 291 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL A+AVDALG ENV + LP +YT+ S + A +ALG K + Sbjct: 292 FRKVWLGLSGGIDSALVLAMAVDALGGENVTAVRLPSRYTAGLSNDLAEEQCRALGVKLE 351 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + + I EN+QSR RG ILMALSN ++LTT NKSE Sbjct: 352 TIAIEPAFEGLLAALGPLFADTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEY 411 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSA Sbjct: 412 AVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSA 464 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELR +QTDQ+SLPPY +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Sbjct: 465 ELRDNQTDQDSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRH 524 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QA G K++ ++FGR+R YPI+N + Sbjct: 525 QAAPGPKVSRRAFGRERRYPITNGYS 550 >gi|91200981|emb|CAJ74038.1| similar to NAD synthase [Candidatus Kuenenia stuttgartiensis] Length = 547 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 215/567 (37%), Positives = 315/567 (55%), Gaps = 39/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ+N VVGD N+ K E A R+ DL++F EL ++GYPP+D + +F+ Sbjct: 1 MKVALAQINTVVGDFENNVRKICSFIERAKRKHADLVVFPELAVTGYPPKDFLDIPAFVS 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 A+ + G +VGF ++++ V N+ + I++V K LP Y Sbjct: 61 HNLKALRDITQQV--SGIAAIVGFVDRNRQSYGKLVHNAAAFIQDRQIVSVHHKSLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAEF 170 F E R F S S P+ F + LGI ICEDIW + + L +GA Sbjct: 119 DVFDESRYFESACSITPVQFNNYTLGISICEDIWNDEEFWTRPLYETDPIEKLISKGANV 178 Query: 171 LFSLNASPYYHNKLKKRH-EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +++ASP+ K + ++T +P IYVNQ+GG DEL+FDG+S + Q + Sbjct: 179 IINISASPFTVEKHESIRLRMLTHDAKKYKVPFIYVNQIGGNDELVFDGSSAVINAQGKR 238 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 Q F E + + + + + E A +L LRDYV K Sbjct: 239 IAQAAAFGEDLIVVDLE------------NTATQVVPQTFTPIETVQKALLLGLRDYVVK 286 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F KVIIGLSGGIDSA+ AA+AV+ALG ENV I++P +++S S++DA +K L Sbjct: 287 CGFEKVIIGLSGGIDSAVTAALAVEALGSENVMGIIMPSQFSSQGSVDDAVQLSKNLAID 346 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 Y + PI DL + + +++ + + P I EN+Q+RIRGNI+M LSN ++L+T NKS Sbjct: 347 YRIFPIKDLFDGYQTILREEFRGLPFDIAEENLQARIRGNIIMTLSNKYGYLVLSTGNKS 406 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + D+ KT V++LA + N E+IP L K P Sbjct: 407 EMAVGYCTLYGDMNGGLALISDVPKTMVYELAKYMNRE---------KEIIPQETLSKPP 457 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYK 528 SAELRP+Q DQ+SLPPY ILD I+K +E + + +++ TVR V + +EYK Sbjct: 458 SAELRPNQLDQDSLPPYNILDSILKAYIEEAKCIEEIVRMGFDETTVRDVIQKVNRNEYK 517 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 RRQA G K+T+K+FG R PI++KF Sbjct: 518 RRQAAPGIKVTSKAFGSGRRMPIAHKF 544 >gi|294786968|ref|ZP_06752222.1| glutamine-dependent NAD(+) synthetase [Parascardovia denticolens F0305] gi|315226607|ref|ZP_07868395.1| NAD synthetase [Parascardovia denticolens DSM 10105] gi|294485801|gb|EFG33435.1| glutamine-dependent NAD(+) synthetase [Parascardovia denticolens F0305] gi|315120739|gb|EFT83871.1| NAD synthetase [Parascardovia denticolens DSM 10105] Length = 560 Score = 580 bits (1495), Expect = e-163, Method: Composition-based stats. Identities = 222/559 (39%), Positives = 317/559 (56%), Gaps = 20/559 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA+AQ++ VGD+ GN AK A QG D++LF E+ ++GYP EDL F+ +F Q Sbjct: 16 VTIALAQIDTCVGDLDGNAAKVLSYSRRAAGQGADVVLFPEMTLTGYPIEDLAFRATFRQ 75 Query: 65 ACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPNY 120 A TL D G G +VVG D G+ N +++L G + A DK LPNY Sbjct: 76 AAWDKASTLAEDLGKEGLGDLYVVVGTVAADAHGLPRNRLIVLHQGVVEASYDKHFLPNY 135 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G + + ++G ICEDIW+ L ++G + L ++N SPY Sbjct: 136 GVFDEFRIFSPGDLPLVMTIKGRKIGFAICEDIWQEGGPVAQLAQKGIDLLATINGSPYE 195 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R ++ + V P+IY+NQVGGQD+L+FDGASF + + + F E Sbjct: 196 EGKGHIRTDLCARRAREVTAPVIYLNQVGGQDDLVFDGASFVVNPDGGVEERSPQFVEDL 255 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQE-EEADYNACVLSLRDYVQKNNFHKVIIGL 299 + SD + + IPL + +E Y ACVL L+DY+ KN F V++GL Sbjct: 256 SFWTL-----PAVAGTDSDQAGRSTLIPLMDSDEEVYRACVLGLKDYMAKNGFKGVVLGL 310 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL A +A DA+G NV + +P Y+S S +DAA A +G Y++ PI L Sbjct: 311 SGGIDSALVATMAADAIGGSNVWGLSMPSMYSSSGSKDDAADLAANMGAHYEIQPIEPLF 370 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + + GI AEN+Q+R+RG ++MA SN + L T NKSE++ GY T+Y Sbjct: 371 QAFQKQL------DLQGIAAENLQARMRGVLVMAYSNSHGLLALATGNKSELACGYSTIY 424 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GD GG+ P+KD+ KT+V+QLA WRNS+ + G P IP + + K PSAELRP Q D Sbjct: 425 GDAVGGYAPIKDVLKTKVWQLAKWRNSYALGKGQVP---PIPVNSILKPPSAELRPGQKD 481 Query: 480 QESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLP Y +LD ++ +E + + ++ ETV V L+ +E+KRRQ P+G K+ Sbjct: 482 SDSLPEYELLDQVLASYIEKAHGRADLLKDGFDPETVDTVMRLVDKAEWKRRQYPLGPKV 541 Query: 539 TAKSFGRDRLYPISNKFRD 557 TA +FGRDR P+++ FR+ Sbjct: 542 TALAFGRDRRLPVTSAFRE 560 >gi|17547066|ref|NP_520468.1| NAD synthetase [Ralstonia solanacearum GMI1000] gi|17429367|emb|CAD16054.1| probable nh3-dependent nad+ synthetase signal peptide protein [Ralstonia solanacearum GMI1000] Length = 546 Score = 580 bits (1495), Expect = e-163, Method: Composition-based stats. Identities = 218/562 (38%), Positives = 317/562 (56%), Gaps = 31/562 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+N VGD+AGN A+ A EA++ G +++ EL ++GYPPEDL+ + +F+ A Sbjct: 5 VALAQINCTVGDLAGNAARIVAAAREAHQAGARILVTPELSLTGYPPEDLLLRPAFLDAA 64 Query: 67 SSAIDTL-KSDTHDGGAGIVVGFPR---------QDQEGVLNSVVILDAGNIIAVRDKIN 116 S A+D L G +++G P+ N+ + G ++ K+ Sbjct: 65 SRALDALVAELAAFAGLHVLIGHPQLLFEAPAPGSALPKPTNTATVAVDGRVLGQYHKLE 124 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPN F EKR F G R G+++CED W A+ + NA Sbjct: 125 LPNNEVFDEKRYFQVGGEPFVFDVEGTRFGVILCEDAWYPKATAWAKAAG-AQVVLIPNA 183 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R +I+ ++ LP +YVN VGGQDEL+FDG SF D + A +M F Sbjct: 184 SPYHLDKEDLREQIIGARVQESGLPHVYVNLVGGQDELVFDGGSFVLDAHGKPAARMAQF 243 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + E Y A L +RDY+ KN F I Sbjct: 244 VEGVGYVRFD----------GARPLPGEIAPEATLEAQVYAALKLGVRDYIGKNGFPGAI 293 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 IGLSGG+DSAL AIAVDALG + V+ +M+P +YT+ S DA A LG +YD LPI Sbjct: 294 IGLSGGVDSALVLAIAVDALGADRVRAVMMPSRYTADISWLDARDMAARLGVRYDELPIM 353 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + F +++ ++ P ENIQ+RIRG +LMALSN S ++LTT NKSE++VGY Sbjct: 354 PMFDAFRGALAEEFRDLPEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKSEMAVGYC 413 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM+GGF +KD++KT V++L +RN+ L+EVIP IL ++PSAELR + Sbjct: 414 TLYGDMAGGFAVIKDIFKTLVYRLCRYRNA---------LSEVIPERILTRAPSAELREN 464 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 QTDQ+SLP Y LD I++R +E + + + V+ + L+ +EYKRRQAPVG Sbjct: 465 QTDQDSLPEYDALDAIVQRYMEQNQPVAEIIAAGFAEADVQKIVRLIKINEYKRRQAPVG 524 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 ++T ++FGRD YPI+++F++ Sbjct: 525 IRVTQRAFGRDWRYPITSRFKE 546 >gi|190575604|ref|YP_001973449.1| NAD synthetase [Stenotrophomonas maltophilia K279a] gi|190013526|emb|CAQ47161.1| putative glutamine-dependent NAD synthase [Stenotrophomonas maltophilia K279a] Length = 544 Score = 580 bits (1495), Expect = e-163, Method: Composition-based stats. Identities = 214/559 (38%), Positives = 309/559 (55%), Gaps = 20/559 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 + ++IA+AQ + VGD+AGN + +A + G +L++F EL +SGYPPEDL+ + Sbjct: 1 MASIRIAMAQFDFPVGDVAGNTERIIEMIGQARDEYGAELVMFPELAVSGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ C A+ + + G VVG+P+ V N+ +L G + K LPNY Sbjct: 61 GFLYECEQAMARIATACR--GITAVVGWPQAAGAVVYNAASVLRDGLVEQTYRKRELPNY 118 Query: 121 SEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + F E+R F + I +G+LICED+W + ++ GA+ + NASP Sbjct: 119 AVFDERRYFDVDPDGGSCVFEVNGIPVGLLICEDLWFAEPLADTVR-AGAQLVVVPNASP 177 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K +R ++ + I Y+N VGGQD L+FDGAS DG + F + Sbjct: 178 YERGKHAQRDAVLAARTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVD 237 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 Q + E+ + + DD +M + A ++DY +KN F KV +G Sbjct: 238 QWLLVEYDGQTRRFMPHVWMDDGDESMD------ALAWRAVTRGIQDYCRKNGFKKVWLG 291 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A+AVDALG ENV + LP +YT+ S + AA +ALG K + + I Sbjct: 292 LSGGIDSALVLALAVDALGAENVTAVRLPSRYTAGMSNDLAAEQCQALGVKLEAVSIEPA 351 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 ++ + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY T+ Sbjct: 352 FKGLMESLAPMFEGTAPDVTEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAVGYATI 411 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG+ PLKDLYKT+VF L+ WRN+ G VIPP+++ + PSAELR +Q Sbjct: 412 YGDMCGGYAPLKDLYKTEVFGLSKWRNTVGG-------APVIPPAVISRPPSAELRENQL 464 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLP Y +LD I+ R ++ E+S Y+ V V L+ SE+KR QA G K Sbjct: 465 DQDSLPAYDVLDGILYRYIDQEQSRTEIVAAGYDAAVVDRVLRLVRISEWKRHQAAPGPK 524 Query: 538 ITAKSFGRDRLYPISNKFR 556 ++ ++FGR+R YPISN ++ Sbjct: 525 VSRRAFGRERRYPISNGYK 543 >gi|206900932|ref|YP_002250055.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum H-6-12] gi|206740035|gb|ACI19093.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum H-6-12] Length = 540 Score = 580 bits (1495), Expect = e-163, Method: Composition-based stats. Identities = 218/561 (38%), Positives = 313/561 (55%), Gaps = 35/561 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQ+NP +GD+ GN+ K + A DLI+F EL I GYPP DL++ + Sbjct: 1 MKVAIAQINPTIGDLKGNLEKIISKIDRAKNLSADLIIFPELSIIGYPPRDLIYNMDLAK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +++ K GI++G P + + + NS + G + +DK LPNY F Sbjct: 61 AIETSLKE-KIAPRSYDIGIILGSPYYEDKNIYNSALFFYKGKLYFRQDKTLLPNYDVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEFLFSL 174 EKR F +N PI F++ LGI ICEDIW + + + L QG + + ++ Sbjct: 120 EKRYFKPASNNIPIKFKNKLLGITICEDIWNDKDYWNRKIYEIDPLEKLASQGIDIIINI 179 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 +ASPYYH K+ R +++ IIYVNQVGG DELIFDG S + LA+ K Sbjct: 180 SASPYYHGKISLRIDMLRHIARKYKKEIIYVNQVGGNDELIFDGTSLVMNKDGSLAWIGK 239 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E + + ++ + ++ Y A VL +RDYV K F K Sbjct: 240 EFEEDFVVID-------------TNKLSRENITINEDISFIYKALVLGVRDYVIKTGFKK 286 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++ LSGGIDS++ A +AV ALGKENV I +P +Y+S +S DA AK LG +Y V+P Sbjct: 287 ALVALSGGIDSSVTACLAVAALGKENVLGIYMPSRYSSKESAIDAEMLAKNLGIEYRVIP 346 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I + + F ++ + EN+Q+RIRGNI+M +SN ++L+T NKSE+++G Sbjct: 347 IEKIFSSFIETLNPNNRVFMDN-AEENLQARIRGNIIMFISNREGYLVLSTGNKSELAMG 405 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM+GG + + DL KT V++LA + N E+IP +L K PSAELR Sbjct: 406 YCTLYGDMTGGLSVIGDLPKTLVYELARYINRD---------REIIPERVLRKPPSAELR 456 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAP 533 P+Q D++SLPPY +LD IIK +E+ + + YN E V V + EYKRRQAP Sbjct: 457 PNQKDEDSLPPYHVLDPIIKSYIEDNLTVEEIIKLGYNSELVENVVKKVDSMEYKRRQAP 516 Query: 534 VGTKITAKSFGRDRLYPISNK 554 K+T+K+FG R PI+ + Sbjct: 517 PVLKVTSKAFGVGRRMPIAWR 537 >gi|257054803|ref|YP_003132635.1| NAD+ synthetase [Saccharomonospora viridis DSM 43017] gi|256584675|gb|ACU95808.1| NAD+ synthetase [Saccharomonospora viridis DSM 43017] Length = 577 Score = 580 bits (1495), Expect = e-163, Method: Composition-based stats. Identities = 218/584 (37%), Positives = 327/584 (55%), Gaps = 37/584 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ+N VGD++GN A G ++LF E+ + GYP EDL + + Sbjct: 1 MPQLRIALAQVNTTVGDLSGNSDLVVEWTRRAASDGAHVVLFPEMALPGYPVEDLALRGA 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 F +A +A+ L + D G +VVG+ D G N+V L G ++A + K +LP Sbjct: 61 FTEASRAAVTELATAIADAGHGDVCVVVGYLDADDVGPRNAVAALYRGEVVATQYKHHLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 NY F E+R F G + + + LG+ ICED+W+ L G + + +LNASP Sbjct: 121 NYGVFDERRYFEPGTTLTVLRTHGVDLGLAICEDLWQEGGPVAALGAFGVDLVLALNASP 180 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K R +VT + + V P+ Y N VGGQD+L+FDG SF D L + F+E Sbjct: 181 YERAKSDVRVPLVTRRAAEVKAPVAYANLVGGQDDLVFDGGSFVVDADGVLLARAPQFAE 240 Query: 239 QNFMTEWHYDQQLSQWNYMSDDS------------------------ASTMYIPLQEEEA 274 + + ++ + ++ + PL +E Sbjct: 241 HLLVVDLDLPERRGTGDRSRGEARVEGLAVRRRVLSDVPLDPYPVTYRPELAEPLSDEAE 300 Query: 275 DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQ 334 ++A V++L+DYV+KNNF V++G SGGIDSA+ AA+A DALG + V + +P KY+S Sbjct: 301 IWSALVMALQDYVRKNNFRSVLLGFSGGIDSAVVAALAADALGSDAVYGVSMPSKYSSAH 360 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMAL 394 S DAA A+ LGC + V P+ ++V + + + G+ ENIQ+R+RG +LMAL Sbjct: 361 SRSDAAELARRLGCHFRVEPVENIVAAYVDQL------QLEGVAEENIQARVRGMMLMAL 414 Query: 395 SNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG 454 SN ++L T NK+E++VGY T+YGD GGF P+KD++KTQV++LA WRN+ G Sbjct: 415 SNMEGHLVLATGNKTELAVGYSTIYGDAVGGFAPIKDVFKTQVWELARWRNAEAEKRGET 474 Query: 455 PLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDE 513 P IPP+ + K PSAELRP Q D +SLP Y +LD++++ V + F + ++ E Sbjct: 475 P---PIPPNSITKPPSAELRPGQLDTDSLPDYALLDELLENYVGGDRGFADLLAAGFDAE 531 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 TV V ++ +EYKRRQ P G KIT K+FGRDR P++N + + Sbjct: 532 TVDRVVRMVDRAEYKRRQYPPGPKITFKAFGRDRRLPLTNAWHE 575 >gi|169830368|ref|YP_001716350.1| NAD+ synthetase [Candidatus Desulforudis audaxviator MP104C] gi|169637212|gb|ACA58718.1| NAD+ synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 543 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 225/563 (39%), Positives = 326/563 (57%), Gaps = 34/563 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NP VGDI GN A A DL++F EL + GYPP+DL+ + F+ Sbjct: 1 MRIAVAQINPTVGDINGNTDLIVSATGRAREAAADLVVFPELAVCGYPPKDLLCRADFLD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ-DQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + +D +++ T + ++VG P + D G+ N+ V+L + K LP Y F Sbjct: 61 AVEAGLDRIRAATTE--IAVLVGAPVRGDDGGLFNAAVLLRDRRVAGRVAKTLLPEYDVF 118 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEFLFS 173 E+R F G + P+ RD+RLG+ +CEDIW + K L +G + + Sbjct: 119 DERRYFAPGAAQPPLTLRDLRLGVTVCEDIWNIGGVTGIPPYPVDPVKELADRGVDLFIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 L+ASPY+ K ++R E+V + P++YVNQ+GG D+L+FDGASF D + ++ Q Sbjct: 179 LSASPYHLRKQRQRLEVVGAVAARYSRPVLYVNQIGGNDDLVFDGASFLTDSRGRVVLQG 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F ++ +H L ++ S++ Y A VL L DY++K F Sbjct: 239 LSFETDFWVFSFHDINTLPVLEAKPEEGPSSV----------YRALVLGLADYLRKTGFR 288 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ AA+AV ALG ENV + +P +Y+S SLEDA A+ LG ++ VL Sbjct: 289 KAVVGLSGGIDSAVTAALAVAALGAENVLGVSMPSRYSSRSSLEDARELARRLGIEFRVL 348 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI F + + + ENIQ+R+RG ILM +SN ++L+T NKSE++V Sbjct: 349 PIDVHFQSFLDQFNPDGRPRL-DVAEENIQARLRGMILMFISNREGYLVLSTGNKSEMAV 407 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDM+GG L D+ KT V++LA+ N G EVIPPSI+ K+PSAEL Sbjct: 408 GYTTLYGDMAGGLAVLADVPKTMVYELAALVNREG---------EVIPPSIIRKAPSAEL 458 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQA 532 RP Q DQ+SLPPYP+LD I+K +E S Q Y + VR V ++ +EYKRRQA Sbjct: 459 RPGQVDQDSLPPYPVLDGILKAYIEEGCSVSQIVKQGYAEPVVRRVVAMVDRAEYKRRQA 518 Query: 533 PVGTKITAKSFGRDRLYPISNKF 555 P G K+T+K+FG R +PI+ ++ Sbjct: 519 PPGLKVTSKAFGPGRRFPIAQRW 541 >gi|289667066|ref|ZP_06488141.1| NAD synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 551 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 221/557 (39%), Positives = 311/557 (55%), Gaps = 20/557 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSF 62 L+IA+AQ + VG +A N + A + D++LF EL ISGYPPEDL+ + F Sbjct: 9 TLRIAMAQFDFPVGAVAQNTDRIIEHIAAARDEFEADIVLFPELAISGYPPEDLLLRPGF 68 Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + C A+ + + T G VVG+P+ V N+ +L G I A K LPNY+ Sbjct: 69 LAHCEEALGRIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPNYAV 126 Query: 123 FHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F N + +++G++ICED+W + + K AE + NASPY Sbjct: 127 FDERRYFDVDPDGDNCVFTVKGVQVGVVICEDLW-FAEPLANTVKARAELVLVPNASPYE 185 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ + I Y+N VGGQD L+FDGAS DG + F +Q Sbjct: 186 RGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVDQW 245 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + ++ ++ DD +M + A V L+DY +KN F KV +GLS Sbjct: 246 LVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCRKNGFSKVWLGLS 299 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIAVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 300 GGIDSALVLAIAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETIAIEPAFE 359 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T+YG Sbjct: 360 GLLGALGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYATIYG 419 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +QTDQ Sbjct: 420 DMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRDNQTDQ 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Q+ G K++ Sbjct: 473 DSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRHQSAPGPKVS 532 Query: 540 AKSFGRDRLYPISNKFR 556 ++FGR+R YPI+N +R Sbjct: 533 RRAFGRERRYPITNGYR 549 >gi|288817743|ref|YP_003432090.1| NH3-dependent NAD+ synthetase [Hydrogenobacter thermophilus TK-6] gi|288787142|dbj|BAI68889.1| NH3-dependent NAD+ synthetase [Hydrogenobacter thermophilus TK-6] gi|308751342|gb|ADO44825.1| NAD+ synthetase [Hydrogenobacter thermophilus TK-6] Length = 565 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 223/578 (38%), Positives = 316/578 (54%), Gaps = 38/578 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL I IAQ++ VGD+ GN K + EE +R LI+F EL +SGYPPEDL+ + Sbjct: 1 MKSKLNITIAQMDITVGDVEGNAIKILKIWEEYHRV-SHLIVFPELALSGYPPEDLLLRM 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 FI+ C +D ++ + A ++G P + + + NS +++ G ++A K LPNY Sbjct: 60 DFIKECQRWLDIIRDASAKFEAMALIGTPFYEGD-LYNSALLVGGGKLLAYYHKHFLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F EKR F G + ++++GI +CED+W + + GA L ++NASPYY Sbjct: 119 SVFDEKRYFRKGTYGTMVELGEVKIGISVCEDLWHPDGLERTYAIMGAHALININASPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + + + + ++YVN VGGQDEL+FDG S D + + K F E Sbjct: 179 FGKYEFKEAFLKARAEDNLCYVVYVNAVGGQDELVFDGRSLVIDPDGHICARAKAFEEDV 238 Query: 241 FMTEWHYDQ----------------------QLSQWNYMSDDSASTMYIPLQEEEADYNA 278 ++ + + + ++EE Y A Sbjct: 239 LTVSLDVEKVKRRRLLDTRLREGKEKYHVISCGADTYRELEVFPPRVERNPKDEEEIYTA 298 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 L YV+KNNF KV++GLSGGIDS+L A +AVDALG + V I +P ++TS +S ED Sbjct: 299 LKTGLEAYVKKNNFSKVVLGLSGGIDSSLVACLAVDALGSDRVVGIFMPSEFTSKESKED 358 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A + AK LG + PI + F + G+ EN+Q+RIR NIL LSN Sbjct: 359 AVSLAKNLGIELYQFPIDVIFKSFRDTLG----FTDFGVADENLQARIRANILFYLSNRY 414 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 ++L+TSNKSE SVGY T+YGDM+GGF PLKD+YKT V++LA +RNS L Sbjct: 415 GWLVLSTSNKSEASVGYTTIYGDMAGGFAPLKDVYKTLVYRLARYRNS---------LRP 465 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRY 517 IP + +K PSAELRP Q DQ++LPPY +LD I+ +E S Q + ETV Sbjct: 466 DIPERVFQKPPSAELRPGQKDQDTLPPYQMLDQILTLYIEEGLSQEEIVQKGIDRETVEK 525 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V ++ +EYKRRQAPVG KIT ++FG+D PI+N + Sbjct: 526 VIRMIRLAEYKRRQAPVGIKITPRAFGKDWRMPITNMW 563 >gi|85711028|ref|ZP_01042088.1| NAD(+) synthase [Idiomarina baltica OS145] gi|85694941|gb|EAQ32879.1| NAD(+) synthase [Idiomarina baltica OS145] Length = 538 Score = 579 bits (1493), Expect = e-163, Method: Composition-based stats. Identities = 222/555 (40%), Positives = 318/555 (57%), Gaps = 19/555 (3%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSS 68 +AQL+ VG + N + + E +R D+I+F EL I+GYPPEDL+ + +A + Sbjct: 1 MAQLDFTVGALHNNTSLILKTVAEQSRDH-DIIVFPELAITGYPPEDLLLRTDHQEAVDN 59 Query: 69 AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRT 128 A++ + + D ++VG P + E + N + +L G + K LPN F E+R Sbjct: 60 AVEQISAAASD--CVVIVGHPSKVGEQLFNVISVLHRGECLLRYKKQRLPNTGVFDEQRY 117 Query: 129 FISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRH 188 F+ G ++ R+G++ICED+W + L + + S+NASPY +K +R Sbjct: 118 FVPGDEGQVFEWQGYRIGLMICEDLW-HPEPLARLADDQLDLVLSVNASPYEIDKHDQRL 176 Query: 189 EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD 248 ++ +++ PI Y+N GGQDELIFDG S D Q +L ++ H + + Sbjct: 177 SVLKQRVAEHGFPIAYLNNCGGQDELIFDGHSLVLDKQGELVAELPHCQTTLATLKLTTE 236 Query: 249 QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + S + + Y+A VLS+RDYV KN F V++GLSGGIDSAL Sbjct: 237 SLTCEAFPPYAGEDSDLRL-----AHVYDALVLSVRDYVNKNGFKNVLLGLSGGIDSALT 291 Query: 309 AAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 AIA DALG E VQ +M+P+KYTS SLEDA A+ L KYDV+PI + + F + Sbjct: 292 LAIASDALGSERVQAVMMPFKYTSNMSLEDAEQQAETLNVKYDVVPIEPMFDAFMKQLDP 351 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 F + EN+QSR RG +LMALSN S A++LTT NKSE++VGY TLYGDM GGF P Sbjct: 352 FFAGTSTDTTEENLQSRCRGVLLMALSNKSGALVLTTGNKSEVAVGYATLYGDMCGGFAP 411 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPI 488 +KD+ KT V+QLA++RN+ IP ++E+ PSAEL P Q D +SLP Y Sbjct: 412 IKDVPKTLVYQLAAYRNTRSAC---------IPERVIERPPSAELAPDQVDSDSLPDYGD 462 Query: 489 LDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDR 547 LD I+ VE + S ++ +N+ VR L+ +EYKRRQA VG KITA++FGRDR Sbjct: 463 LDRILSLYVEQDWSVVDIIAAGFNEADVRRALKLVDINEYKRRQAAVGPKITARNFGRDR 522 Query: 548 LYPISNKFRDHISEE 562 YPI++ +R + + Sbjct: 523 RYPITSHYRFELERQ 537 >gi|21232521|ref|NP_638438.1| NAD synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767395|ref|YP_242157.1| NAD synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|21114312|gb|AAM42362.1| NH3-dependent NAD synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572727|gb|AAY48137.1| NH3-dependent NAD synthetase [Xanthomonas campestris pv. campestris str. 8004] Length = 552 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 221/566 (39%), Positives = 313/566 (55%), Gaps = 26/566 (4%) Query: 1 MLK------KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPP 53 M++ L+IA+AQ + VG + N + A + D++LF EL ISGYPP Sbjct: 1 MMESAVTAHTLRIAMAQFDFPVGAVTQNTDRIIEYIAAARDEFEADIVLFPELAISGYPP 60 Query: 54 EDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRD 113 EDL+ + F+ C A+ + + T G VVG+P+ V N+ +L G I A Sbjct: 61 EDLLLRPGFLAHCEQALARIAAATR--GIVAVVGWPQSAGSVVYNAASVLREGRIEATYR 118 Query: 114 KINLPNYSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 K LPNY+ F E+R F N + + +++G++ICED+W + + GAE + Sbjct: 119 KRELPNYAVFDERRYFDVDPDGDNCVVTVKGVQVGVVICEDLW-FAEPLAKTVQAGAELV 177 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 NASPY K +R ++ + I Y+N VGGQD L+FDGAS DG + Sbjct: 178 LVPNASPYERGKHAQRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHP 237 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 F +Q + ++ ++ DD +M + A V L+DY KN Sbjct: 238 AAAAFVDQWLVVDYAAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLKDYCGKNG 291 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV +GLSGGIDSAL A+AVDALG ENV + LP +YT+ S + A +ALG K + Sbjct: 292 FRKVWLGLSGGIDSALVLAMAVDALGGENVTAVRLPSRYTAGLSNDLADEQCRALGVKLE 351 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + + + I EN+QSR RG ILMALSN ++LTT NKSE Sbjct: 352 TIAIEPAFEGLLAALGPLFADTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEY 411 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSA Sbjct: 412 AVGYATIYGDMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSA 464 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELR +QTDQ+SLPPY +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Sbjct: 465 ELRDNQTDQDSLPPYDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRH 524 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QA G K++ ++FGR+R YPI+N + Sbjct: 525 QAAPGPKVSRRAFGRERRYPITNGYS 550 >gi|294676904|ref|YP_003577519.1| NAD(+) synthase (glutamine-hydrolyzing) [Rhodobacter capsulatus SB 1003] gi|547988|sp|Q03638|NADE_RHOCA RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|45986|emb|CAA42042.1| NAD synthetase [Rhodobacter capsulatus] gi|294475724|gb|ADE85112.1| NAD(+) synthase (glutamine-hydrolyzing) [Rhodobacter capsulatus SB 1003] Length = 552 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 233/559 (41%), Positives = 334/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I +AQLNP VG +A N KA A + G DL+ E+F++GY +DLV K Sbjct: 1 MTDRFRITLAQLNPTVGALAANAEKAMAAWQAGRAAGADLVALPEMFLTGYQTQDLVLKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F++ +A+ L + D G + +G P D+ G N+ +L G +IA K +LP+ Sbjct: 61 AFLRDAMAAMAALAAQVVD-GPALGIGGPYVDETGSYNAWWVLKDGRVIARALKHHLPHD 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G +DP+ + LG+ +CED W + ++ L GAE L N SPY Sbjct: 120 DVFDEMRLFDQGPVSDPLRLGPVALGVPVCEDAW-HPDVAGALAAAGAEVLMVPNGSPYR 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 KL R ++ +++ LP++Y+N VGGQD+ +FDGASF + +A Q+ F E Sbjct: 179 RGKLDLRRQVTGARVAETGLPLLYLNMVGGQDDQLFDGASFVLNPDGSVAVQLPAFEEAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + + + P + E DY A VL L+DY++K+ F +V++GLS Sbjct: 239 VHVDLERGAADWRA------VPADIVAPPGDIEQDYRAMVLGLQDYLRKSGFSRVVLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL A IA DALG NV +MLP +YTS SL+DAA A+ LG + D + I Sbjct: 293 GGIDSALVAVIAADALGAGNVHCVMLPSRYTSQGSLDDAADLARRLGARLDTVEIEGPRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ L + ENIQSR+RG ILMA+SN AMLLTT NKSE++VGY T+YG Sbjct: 353 AVEGALAHVLAGTAPDVTEENIQSRLRGVILMAISNKFGAMLLTTGNKSEVAVGYCTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NPLKDLYKT+VF+ WRN+ P E+IP +I++K PSAELR +QTDQ Sbjct: 413 DMAGGYNPLKDLYKTRVFETCRWRNATHRPWMQAPAGEIIPVAIIDKPPSAELRENQTDQ 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I++R+VE ++S ++ TV+ +EHLLY SE+KR Q+ G ++T Sbjct: 473 DSLPPYEVLDAILERLVEGDQSVDQIVAAGFDRATVKRIEHLLYISEWKRFQSAPGPRLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YP+ N++RD Sbjct: 533 TRAFWLDRRYPMVNRWRDQ 551 >gi|167630843|ref|YP_001681342.1| nad+ synthetase [Heliobacterium modesticaldum Ice1] gi|167593583|gb|ABZ85331.1| nad+ synthetase [Heliobacterium modesticaldum Ice1] Length = 552 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 212/568 (37%), Positives = 317/568 (55%), Gaps = 33/568 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ NPVVGDIA N+ KA A A + G LI+F+EL+++GYPP+DL+ K FI Sbjct: 1 MKIAIAQYNPVVGDIANNLTKAVDAWSRAAQAGASLIVFSELYLTGYPPKDLLEKPWFID 60 Query: 65 ACSSAIDTLKSDTHDG-GAGIVVGFPRQ----DQEGVLNSVVILDAGNIIAVRDKINLPN 119 +A++ L + D I++G P + +G+ N+ ++ G ++ + K LP Sbjct: 61 RTEAALNELVRRSVDYPDTAILIGAPLRWDNPAGKGLANAAWLIGGGKVLHHQAKSLLPT 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----------NICKHLKKQGA 168 Y F E R F S P+ F +LGI +CED W + + + L +QGA Sbjct: 121 YDVFDEARYFDPAPSVVPVPFGGEQLGISVCEDAWNDPAFWPQRRRYDRDPIEELARQGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +++ASP+ +K + R+ ++ +P +YVNQVG DELIFDG S FD Q Sbjct: 181 TVLINISASPFEMSKEETRYRLIRSHAVRYGIPFVYVNQVGANDELIFDGGSMVFDRQGT 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 L F E + + + A ++ + ++A VL + DY++ Sbjct: 241 LLALSPAFREDLTVVDL-------KQATQDQPGAPASFVAQDRVASVHDALVLGIADYLR 293 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K+ F K ++GLSGGIDSA+ +A +ALG ENV I +P Y+S S+ED+ A LG Sbjct: 294 KSGFTKAVVGLSGGIDSAVTCCLAAEALGAENVLGISMPSPYSSMGSVEDSRLLAANLGV 353 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + V+PI D+ + + + + + + + EN+Q+RIRGN+LMA SN +LL+T NK Sbjct: 354 PFKVIPIADIYHAYLFTLEEHFEGRKADVTEENLQARIRGNMLMAFSNKFGHLLLSTGNK 413 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++ GY TLYGDMSGG + L D+ KT V++LA N + K+ Sbjct: 414 SELATGYCTLYGDMSGGLSVLSDVPKTLVYELAEHINREREIIPRIIIE---------KA 464 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEY 527 PSAELRP Q DQ++LPPYP+LD I++ +E +S ++ + E VR+V + SEY Sbjct: 465 PSAELRPGQKDQDTLPPYPVLDAILQLYIEEGQSAEAIIERGFEAEMVRWVIKTVNRSEY 524 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KRRQA G K+T+K+FG R P++ K+ Sbjct: 525 KRRQAAPGLKVTSKAFGVGRRMPVAAKY 552 >gi|149277080|ref|ZP_01883222.1| NAD+ synthetase [Pedobacter sp. BAL39] gi|149231957|gb|EDM37334.1| NAD+ synthetase [Pedobacter sp. BAL39] Length = 546 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 203/562 (36%), Positives = 309/562 (54%), Gaps = 31/562 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +G+ N K + A +G DL++F EL I GYP D + + FI Sbjct: 1 MKIALAQLNYHIGNFESNTKKIIEHVQLARSKGADLVVFAELAICGYPARDFLEFEEFIT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 C A++ + + G +VG P ++ + + N+ V ++ G+I K LPNY Sbjct: 61 LCEQAVEEIAAQCT--GIACIVGLPVKNQVLAGKDLYNAAVFIEDGDIKQTVRKALLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-------ICKHLKKQGAEFLFS 173 F E R F + F+ ++ + ICED+W +N L +Q + + + Sbjct: 119 DVFDEYRYFEPATQFACVPFQGKKIALTICEDLWNINNNPLYISSPMDELIRQQPDLMIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + +R +++ LP++YVNQVG Q E+IFDG S FD Q QL +M Sbjct: 179 IAASPFSYCHDDERVVVLSDNARKYQLPLLYVNQVGAQTEIIFDGGSMAFDNQGQLLDEM 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 +FSE + E+ D + + +P E+ +A VL ++DY QK+ F Sbjct: 239 AYFSEDLRIYEFEDDH------FKGLSPVAQRAVPDIEQIH--DALVLGIKDYFQKSGFS 290 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSAL A+A ALG ENV +++P KY+S S++DA + GCK++++ Sbjct: 291 KAVLGLSGGIDSALVCALACRALGPENVMAVLMPSKYSSDHSVKDALDLVENFGCKHEII 350 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I + + F +++ Q P + ENIQ+R RG ++MA+SN +LL TSNKSE +V Sbjct: 351 EIKAVADAFDEILAPAFQGLPFNLTEENIQARCRGVVVMAMSNKFGYILLNTSNKSECAV 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM G + D+YKTQV+QL + N GI +IP + + K PSAEL Sbjct: 411 GYGTLYGDMCGAIGVIGDVYKTQVYQLCHYMNKDGI---------LIPENSIVKPPSAEL 461 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP Q D +SLP Y LD I+ +E ++S Q ++++ VR V ++ +E+KR Q Sbjct: 462 RPGQKDSDSLPDYDTLDQILYHYIEQKQSSARIIAQGFDEQLVRRVIKMVNNAEFKRYQT 521 Query: 533 PVGTKITAKSFGRDRLYPISNK 554 P +++ K+FG R PI K Sbjct: 522 PPILRVSPKAFGMGRRMPIVGK 543 >gi|170691912|ref|ZP_02883076.1| NAD+ synthetase [Burkholderia graminis C4D1M] gi|170143196|gb|EDT11360.1| NAD+ synthetase [Burkholderia graminis C4D1M] Length = 591 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 226/597 (37%), Positives = 328/597 (54%), Gaps = 44/597 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQ+N VGD AGN+AK A +A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQINVTVGDFAGNVAKIVAAARDAHSAGAKLLVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQE-------------------------G 95 F A ++A+ L G ++VG P +D Sbjct: 60 FYTASAAALADLAQQLKQFAGLHVIVGHPLRDAADSVANSAASGHGNANAPIQRGVPPVD 119 Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK 155 N+ ++ G I K +LPN F EKR F S ++ G++ICED W Sbjct: 120 TFNAASLVVDGRIAGTYRKQDLPNTEVFDEKRYFASDAQPFVFELDGVKYGVVICEDAW- 178 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 +++ + K GA+ L N SP++ NK R +I+ +I LP++YVN VG QDEL+ Sbjct: 179 HASAAQMAKAAGAQVLLIPNGSPFHLNKEAVRFDILRARIRETGLPMVYVNMVGAQDELV 238 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN-----------YMSDDSAST 264 FDG SF D Q +L +M F E E+ L + + Sbjct: 239 FDGGSFVLDAQGELVAKMPQFEEATAFVEFENAVPLRGHGGEAKANDAQLFSGATGANPA 298 Query: 265 MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 + L E Y A V+ +RDYV KN F +IGLSGG+DSAL A+A DALG + V+ + Sbjct: 299 IAPELSLEAQVYAALVMGVRDYVNKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAV 358 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 M+P +YT+ S DAA A+ +G +YD + I + + F S ++Q + P ENIQ+ Sbjct: 359 MMPSRYTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRSSLAQEFEGRPEDATEENIQA 418 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 RIRG +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +R Sbjct: 419 RIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYR 478 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFI 504 N VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Sbjct: 479 NQATAFGTQ----NVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRSLA 534 Query: 505 N-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 Y E V+ V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 535 EIIAAGYAVEDVKRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPVE 591 >gi|254251714|ref|ZP_04945032.1| NAD+ synthase [Burkholderia dolosa AUO158] gi|124894323|gb|EAY68203.1| NAD+ synthase [Burkholderia dolosa AUO158] Length = 607 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 222/580 (38%), Positives = 325/580 (56%), Gaps = 38/580 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+ + A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 43 MKT-RLALAQINVTVGDFAGNVERIVAAARAAHDDGAQLMVTPELALSGYPPEDLLLRPA 101 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG--------------------VLNSV 100 F A ++++ L G ++VG P + N+V Sbjct: 102 FYAAAAASLHALADALKAFDGLAVLVGHPLRGDARAPAVDSNANGPIERGVPPVDTYNAV 161 Query: 101 VILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNIC 160 ++ G I+ K +LPN F EKR F + ++ G++ICED W +++ Sbjct: 162 SLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDAEPLVFELNGVKFGVIICEDAW-HASAA 220 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG S Sbjct: 221 QIAKAAGAQVLLIPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGS 280 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F DGQ L Q+ F E + + E+ + + L E Y A V Sbjct: 281 FVLDGQGALVAQLPQFDEAHAIVEFD----------GAQPLRGAIAPALSLEAQVYRALV 330 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L +RDY+ KN F IIGLSGG+DSAL A+A DALG E V+ +M+P ++T+ S DAA Sbjct: 331 LGVRDYIGKNGFPGAIIGLSGGVDSALVLALACDALGPERVRAVMMPSRFTADISTADAA 390 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN + Sbjct: 391 EMARRVGVRYDEIAIAPMFDAFRAALADEFAGLAEDATEENIQARIRGTLLMALSNKFGS 450 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++LTT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ + +VI Sbjct: 451 IVLTTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNATTDY----AVRDVI 506 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVE 519 P IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V Sbjct: 507 PERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQADVERVT 566 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + + Sbjct: 567 RLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFTERL 606 >gi|194366934|ref|YP_002029544.1| NAD synthetase [Stenotrophomonas maltophilia R551-3] gi|194349738|gb|ACF52861.1| NAD+ synthetase [Stenotrophomonas maltophilia R551-3] Length = 544 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 212/559 (37%), Positives = 311/559 (55%), Gaps = 20/559 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 + ++IA+AQ + VGD+AGN + +A + G +L++F EL +SGYPPEDL+ + Sbjct: 1 MASIRIAMAQFDFPVGDVAGNTERIIEMIGQARDEYGAELVMFPELAVSGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ C A+ + + G VVG+P+ V N+ +L G + K LPNY Sbjct: 61 GFLYECEQAMTRIATACR--GITAVVGWPQAAGAVVYNAASVLRDGLVEQTYRKRELPNY 118 Query: 121 SEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + F E+R F + I +G+LICED+W + +++ GA+ + NASP Sbjct: 119 AVFDERRYFDVDPDGGSCVFEVNGIPVGLLICEDLWFAEPLADTVRE-GAQLVVVPNASP 177 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K +R ++ + I Y+N VGGQD L+FDGAS DG + F + Sbjct: 178 YERGKHAQRDAVLAARTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVD 237 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 Q + E+ + + + DD +M + A ++DY +KN F KV +G Sbjct: 238 QWLVVEYDGETRRFLPHVWMDDGDESMD------ALAWRAVTRGIQDYCRKNGFKKVWLG 291 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSA+ A+AVDA+G ENV + LP +YT+ S + AA +ALG K + + I Sbjct: 292 LSGGIDSAIVLAMAVDAMGAENVTAVRLPSRYTAGLSNDLAAEQCQALGVKLEAVSIEPA 351 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 ++ + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY T+ Sbjct: 352 FKGLMESLAPMFEGTTPDVTEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAVGYATI 411 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG+ PLKDLYKT+VF L+ WRN+ G VIPP+++ + PSAELR +Q Sbjct: 412 YGDMCGGYAPLKDLYKTEVFGLSKWRNTVGG-------APVIPPAVISRPPSAELRENQL 464 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLP Y +LD I+ R ++ E+S Y+ V V L+ SE+KR QA G K Sbjct: 465 DQDSLPAYDVLDGILYRYIDQEQSRTEIVAAGYDAAVVDRVLRLVRISEWKRHQAAPGPK 524 Query: 538 ITAKSFGRDRLYPISNKFR 556 ++ ++FGR+R YPISN ++ Sbjct: 525 VSRRAFGRERRYPISNGYK 543 >gi|171912399|ref|ZP_02927869.1| NAD+ synthetase [Verrucomicrobium spinosum DSM 4136] Length = 543 Score = 577 bits (1489), Expect = e-162, Method: Composition-based stats. Identities = 211/566 (37%), Positives = 307/566 (54%), Gaps = 36/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+N VGD +GN A +A EA QG L++ EL ++GYPP DLV + F+ Sbjct: 1 MKIGLAQINTTVGDFSGNSALILKAYREAVAQGAQLVITPELAMTGYPPRDLVHRSRFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNYS 121 A+ L G ++VGF ++ N+ +L AG I V K LP Y Sbjct: 61 GNIEALRQLAGAV--GAVPLIVGFVDVNEGAGKPFRNAAAVLQAGRIHQVVAKTLLPTYD 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS---------NICKHLKKQGAEFLF 172 F E R F + P+V IR+G+ ICEDIW + L KQG + L Sbjct: 119 VFDEDRYFEPEENLVPVVIEGIRVGVTICEDIWTDDYLPRRLYDVEPPIELAKQGVDLLV 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +L+ASP+ K R +++ + +P++Y N VGG D+L+FDG S ++ + Sbjct: 179 NLSASPFSLGKPTIREKMLGELAAETGVPVVYCNAVGGNDQLVFDGNSLVIGKDGEVLAR 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 + F+E+ + + + + P+ E Y A VL LRDYV K F Sbjct: 239 LASFAEEVAVVDV------------LSGAGARAAEPMVVAEELYQALVLGLRDYVTKCGF 286 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 ++GLSGGIDSAL A +A +ALG NV + LP Y+S S +DA A+ LG +Y+ Sbjct: 287 KSCVLGLSGGIDSALVAVLAAEALGPANVLGVSLPSVYSSEGSKDDARELAEKLGIQYET 346 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI + + +P + EN+QSRIRG ILM+LSN +LLTT NKSE++ Sbjct: 347 IPIQSVFEALKGQTREVFAGKPEDVTEENMQSRIRGLILMSLSNKFGHLLLTTGNKSEMA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY T+YGDM GG + + DL KT+V++++ W N E+IP + +EK PSAE Sbjct: 407 VGYCTIYGDMCGGLSVISDLPKTKVYEVSRWINRE---------REIIPWASIEKPPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP Q DQ++LP Y +LD I++ VE +S + Y++E VR+V + +E+KR Q Sbjct: 458 LRPDQKDQDTLPEYDVLDGILELFVEQGQSIAEIVARGYDEELVRWVLRRVDLNEWKRHQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKFRD 557 A G K+T+K+FG R PI +FR+ Sbjct: 518 AAPGLKVTSKAFGMGRRIPIVQRFRE 543 >gi|254521078|ref|ZP_05133133.1| NAD(+) synthase [Stenotrophomonas sp. SKA14] gi|219718669|gb|EED37194.1| NAD(+) synthase [Stenotrophomonas sp. SKA14] Length = 544 Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats. Identities = 212/559 (37%), Positives = 309/559 (55%), Gaps = 20/559 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKK 60 + ++IA+AQ + VGD+AGN + +A + G +L++F EL +SGYPPEDL+ + Sbjct: 1 MASIRIAMAQFDFPVGDVAGNTERIIEMIGQARDEYGAELVMFPELAVSGYPPEDLLLRP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F+ C A+ + + G VVG+P+ V N+ +L G + K LPNY Sbjct: 61 GFLYECEQAMGRIAAACR--GITAVVGWPQAAGAVVYNAASVLRDGLVEQTYRKRELPNY 118 Query: 121 SEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 + F E+R F + + +G+LICED+W + ++ GA+ + NASP Sbjct: 119 AVFDERRYFDVDPDGGSCVFEVNGVPVGLLICEDLWFAEPLADTVR-AGAQLVVVPNASP 177 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y K +R ++ + I Y+N VGGQD L+FDGAS DG + F + Sbjct: 178 YERGKHAQRDAVLAARTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVD 237 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 Q + ++ + + DD +M + A ++DY +KN F KV +G Sbjct: 238 QWLVVDYDGQSRRFLPHVWMDDGDESMD------ALAWRAVTRGIQDYCRKNGFKKVWLG 291 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSAL A+AVDA+G ENV + LP +YT+ S + AA +ALG K D + I Sbjct: 292 LSGGIDSALVLAMAVDAMGAENVTAVRLPSRYTAGLSNDLAAEQCQALGVKLDAVSIEPA 351 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 ++ + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY T+ Sbjct: 352 FKGLMESLAPMFEGTTPDVTEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAVGYATI 411 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDM GG+ PLKDLYKT+VF L+ WRN+ G VIPP+++ + PSAELR +Q Sbjct: 412 YGDMCGGYAPLKDLYKTEVFGLSKWRNTVGG-------APVIPPAVISRPPSAELRENQL 464 Query: 479 DQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 DQ+SLP Y +LD I+ R ++ E+S Y+ V V L+ SE+KR QA G K Sbjct: 465 DQDSLPAYDVLDGILYRYIDQEQSRGEIVAAGYDAAVVDRVLRLVRISEWKRHQAAPGPK 524 Query: 538 ITAKSFGRDRLYPISNKFR 556 ++ ++FGR+R YPISN ++ Sbjct: 525 VSRRAFGRERRYPISNGYK 543 >gi|221067906|ref|ZP_03544011.1| NAD+ synthetase [Comamonas testosteroni KF-1] gi|220712929|gb|EED68297.1| NAD+ synthetase [Comamonas testosteroni KF-1] Length = 535 Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats. Identities = 211/544 (38%), Positives = 313/544 (57%), Gaps = 15/544 (2%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 GD++GN+ K A E+A G L+L EL + GY EDL + +F+ AC A+ L+ Sbjct: 2 GDLSGNVQKIIAAAEQAYANGARLLLTPELALCGYAAEDLYLRPAFLDACDEALKQLQQA 61 Query: 77 THDG-GAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY 133 + G +V+G P++D + N+ +L G ++A K LPN+ F E+R F +G Sbjct: 62 SSQWPGLALVIGHPQRDAQTGTLFNAASVLRDGQLVARYYKQLLPNFGVFDEQRYFAAGE 121 Query: 134 SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTG 193 + IR+G+LICED W ++ + GA+ L +NASP++ K +R ++ Sbjct: 122 QSCVFELDGIRIGLLICEDAW-HAGPARAAVAAGAQLLLVINASPFHSGKPLEREAVIAQ 180 Query: 194 QISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ 253 + +P++Y + VGGQDE++FDG SF Q+A + F E + Sbjct: 181 RAVENAVPLVYAHLVGGQDEVVFDGCSFAVQADGQVAARAAAFEE-------DLPMMAAH 233 Query: 254 WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 + +A ++A VLS+RDYV KN F +IGLSGG+DSAL AIAV Sbjct: 234 PGDGGVTLMGEVRPLPGHHQALWSALVLSVRDYVGKNRFPGALIGLSGGMDSALVLAIAV 293 Query: 314 DALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 DALG + V+T+M+P YT+ S DA ++ +G +++ + I F + ++ Sbjct: 294 DALGADKVRTVMMPSPYTADISWLDAREMSERVGVQHEEIDIAPQFEAFKAALAGTFAGR 353 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 EN+Q+RIRG +LMA+SN +++LTT NKSE+S GY TLYGDM+GGF +KD++ Sbjct: 354 AEDTTEENLQARIRGTLLMAMSNKFGSIVLTTGNKSEMSTGYCTLYGDMAGGFAVIKDVF 413 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDII 493 KT+VF LA WRN++ + G + IP I+ + PSAELRP Q DQ+SLP Y +LD I+ Sbjct: 414 KTEVFALARWRNANDL---FGTGLDPIPERIITRPPSAELRPDQKDQDSLPDYEVLDAIV 470 Query: 494 KRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 R +EN ES + + + V V L+ +EYKRRQAPVG ++T +SFG+D YPI+ Sbjct: 471 SRYMENNESISSIVAEGFAPADVERVTRLIQINEYKRRQAPVGPRLTMRSFGKDWRYPIT 530 Query: 553 NKFR 556 NKFR Sbjct: 531 NKFR 534 >gi|295839307|ref|ZP_06826240.1| glutamine-dependent NAD+ synthetase [Streptomyces sp. SPB74] gi|197696920|gb|EDY43853.1| glutamine-dependent NAD+ synthetase [Streptomyces sp. SPB74] Length = 586 Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats. Identities = 205/594 (34%), Positives = 306/594 (51%), Gaps = 44/594 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VVGD+AGN A +G L+ F E+ ++GYP EDL + + Sbjct: 1 MPQLRLAMNQIDAVVGDLAGNADAVLHWTRHAAERGAHLVAFPEMVLTGYPVEDLALRST 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A +A+ L + + G G +V+G+ + + N+ +L G + Sbjct: 61 FVEASRAALHALATRLVEAGLGGLPVVLGYLDRSETDQHRYGMPAGSPRNAAAVLHGGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 ALRFAKHHLPNYGVFDEFRYFVPGDTLPVVRVHGVDVALAICEDLWQDGGRVPATRAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R E+V + Y+ GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLELVRKRAREAGCTTAYLAMSGGQDELVFDGDSIVVDKDGS 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQ---------------------LSQWNYMSDDSASTMYI 267 + + F+E F+ + + + Sbjct: 241 VITRAPQFTEGCFLLDLDLPPAPPEEPAGTVHDGLRIEHVTLSPTPLPAYEPEYTGQYAE 300 Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L++ E Y A V LR YV+KN F V+IGLSGGIDSALCAAIA DA+G E+V + +P Sbjct: 301 RLEDAEEVYGALVTGLRAYVRKNGFRTVLIGLSGGIDSALCAAIACDAIGAEHVHGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A G Y +PI + + + + +G+ EN+Q+R+R Sbjct: 361 SKYSSEHSKDDAADLAARTGLHYRTVPIAPMFDAYMDALG------FTGLAEENLQARLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LM +SN ++L NKSE++VGY TLYGD G + P+KD+YK+QVF LA WRN Sbjct: 415 GTTLMGISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSQVFALARWRNQA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP Y +LD ++ V+ ++ Sbjct: 475 AEQRGETP---PIPENTIAKPPSAELRPGQVDTDSLPDYDVLDRVLAMYVDQDQGADAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 ++ E V V ++ G+EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDPEVVARVLRMVDGAEYKRRQYPPGTKISPKGFGKDRRMPITNRWRERAG 585 >gi|294790940|ref|ZP_06756098.1| NAD+ synthetase [Scardovia inopinata F0304] gi|294458837|gb|EFG27190.1| NAD+ synthetase [Scardovia inopinata F0304] Length = 560 Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats. Identities = 226/555 (40%), Positives = 317/555 (57%), Gaps = 26/555 (4%) Query: 8 AIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACS 67 A+AQ++ VGDI GN K A++QG D++LF E+ ++GYP EDL F+ +F +A Sbjct: 27 ALAQIDTCVGDIEGNARKIIDFSRMAHQQGADIVLFPEMTLTGYPIEDLAFRATFRKAAY 86 Query: 68 SAIDTLKSDTHDGGAG---IVVGFPRQDQEGV-LNSVVILDAGNIIAVRDKINLPNYSEF 123 D + D G G +V+G D +G+ N ++IL G + A DK LPNY F Sbjct: 87 RTADQVAVQLQDQGLGSLYVVIGTVGADVDGLPRNRLLILHNGRVEASYDKHFLPNYGVF 146 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E R F +G + + R+G ICEDIW+ L + + L ++N SPY K Sbjct: 147 DEFRIFSAGQETLTLDIKGKRIGFAICEDIWQEGGTVAALAQDHIDVLATINGSPYEEGK 206 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++ + VH P+IY+NQVGGQD+L+FDG SF Q+ Q F E + Sbjct: 207 YHTRVDLCRKRAGQVHAPVIYLNQVGGQDDLVFDGGSFVVGTDGQILAQAGKFQESLLLW 266 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + S + + PL +E Y ACV LRDY++KN+F V++GLSGGI Sbjct: 267 SL------------GNTSPTDLVSPLDPDEEVYQACVAGLRDYMRKNHFSGVVLGLSGGI 314 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A+IA DA G +NV I +P +Y+S S +DAA A+ LG YD+ PI L F Sbjct: 315 DSALVASIAADACGGDNVWGISMPSRYSSDGSRDDAADLARRLGAHYDIQPIEPLFQSFQ 374 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 +S GI AEN+Q+RIRG I+MA SN + L T NKSE++ GY T+YGD Sbjct: 375 QELS------LEGIAAENLQARIRGVIVMAYSNSHGLLALATGNKSELACGYSTIYGDAV 428 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF P+KDL KT+V+QLA WRN +G P IP + + K+PSAELRP Q D +SL Sbjct: 429 GGFAPIKDLLKTRVWQLARWRNRAAQEAGEVP---PIPENSINKAPSAELRPGQKDSDSL 485 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 P Y +LD ++ +E + + ++ +TV V L+ +E+KRRQ P+G K+TA + Sbjct: 486 PEYAVLDQVLAAYIEKAHGRQDLLNDGFDPKTVDTVMRLVDKAEWKRRQYPLGPKVTALA 545 Query: 543 FGRDRLYPISNKFRD 557 FGRDR P+++ FR+ Sbjct: 546 FGRDRRLPVTSAFRE 560 >gi|285017483|ref|YP_003375194.1| nad(+) synthase (glutamine-hydrolyzing) protein [Xanthomonas albilineans GPE PC73] gi|283472701|emb|CBA15206.1| putative nad(+) synthase (glutamine-hydrolyzing) protein [Xanthomonas albilineans] Length = 549 Score = 576 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 218/559 (38%), Positives = 309/559 (55%), Gaps = 16/559 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 ML L++A+AQ + VG + N + E+A G D++LF EL +SGYPPEDL+ + Sbjct: 1 MLSSLRLAMAQFDFPVGAVTQNTDRIMALIEQARDAYGADIVLFPELAVSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C A+ + + H G VVG+P+ V N+ +L G I A K LPN Sbjct: 61 PGFLADCEQAVQRIAACVH--GVVAVVGWPQSAGSVVYNAASVLRDGRIAATYRKRELPN 118 Query: 120 YSEFHEKRTFISGYSN--DPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F + R+G++ICED+W + ++ GAE + NAS Sbjct: 119 YAVFDERRYFDVDLDGEHCVFDVKGTRVGLVICEDLWFPEPLAVTVR-AGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + + Y+N VGGQD L+FDGAS DG ++ F+ Sbjct: 178 PYERGKHAQRDALLAERSRESGAALAYLNVVGGQDALVFDGASVVADGDGRVHPAAAAFT 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + ++ + + S E + A V ++DY +KN F KV + Sbjct: 238 DQWLVVDYDPAARRFVPLHWR--CDSDSASEASSEALAWRAVVRGVQDYCRKNGFSKVWL 295 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL A+AVDALG ENV + LP +YT+ S + AA + LG + + + I Sbjct: 296 GLSGGIDSALVLAMAVDALGAENVAAVRLPSRYTADLSNDLAAEQCRTLGVRLETVTIEP 355 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY T Sbjct: 356 AFEGVLQALGPLFDGTQPDVTEENLQSRSRGLILMALANKFGGLLLTTGNKSEYAVGYAT 415 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKDLYKT+VF LA+WRN+ T VIPP+++ ++PSAELR +Q Sbjct: 416 IYGDMCGGYAPLKDLYKTEVFALATWRNTTA-------ATPVIPPAVITRAPSAELRANQ 468 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ R V+ E S Y E V V L+ +E+KR QA G Sbjct: 469 TDQDSLPPYDVLDGILYRYVDQEASRDEIIAAGYAAEVVDQVIRLVRITEWKRHQAAPGP 528 Query: 537 KITAKSFGRDRLYPISNKF 555 K++ ++FGR+R YPISN + Sbjct: 529 KVSRRAFGRERRYPISNGY 547 >gi|325107816|ref|YP_004268884.1| NAD+ synthetase [Planctomyces brasiliensis DSM 5305] gi|324968084|gb|ADY58862.1| NAD+ synthetase [Planctomyces brasiliensis DSM 5305] Length = 562 Score = 576 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 204/569 (35%), Positives = 311/569 (54%), Gaps = 38/569 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I +AQ+NP+VGD+ GN K A QG +L++F EL I GYPP+D++ + F+ Sbjct: 1 MRIGLAQINPIVGDLEGNGRKILEVARRAAEQGAELLVFPELVICGYPPKDMLLRSGFVD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ---EGVLNSVVILDAGNIIAVRDKINLPNYS 121 AC AID L + G+++G P Q N+ +L G ++ K LPNY Sbjct: 61 ACDEAIDALAAALPPE-LGVLIGHPTHRQQPAGCQANAASLLHNGQVVDTVAKTLLPNYD 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK-------------NSNICKHLKKQGA 168 F E+R F G + PI F +RLG+ ICED W + L G Sbjct: 120 VFDERRYFHPGSNVRPIEFGGLRLGVHICEDAWFGQPDTFYHTRPECERDPVAALIDAGV 179 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + L +L+ASP+ +KLK+RH +++ + ++P+++VNQVGG D+L+FDG+S + + Sbjct: 180 DLLVNLSASPFEIDKLKRRHTLLSRHCQNGNVPLVFVNQVGGNDDLVFDGSSLVLNAAGE 239 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 + Q+ F+E+ + E +A+ + +A V+ LRDY Sbjct: 240 VQHQLDGFAEELRIVEA------------PATAATQPLQTASRSQQLLDALVIGLRDYAA 287 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K F + ++GLSGGIDSA+ +A ALG E V +M+P +Y+S S+ D+ A LG Sbjct: 288 KCGFKECVLGLSGGIDSAVACCLAARALGPEKVHALMMPSRYSSDHSVADSQQLATNLGL 347 Query: 349 KYDVLPIHDLVNHFFSL--MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 ++PI ++ + + + L +P+G+ +N+Q+RIRG ++M SN + L T Sbjct: 348 DAQLVPIDEVHQAYEATRVIGGDLSGQPAGLADQNLQARIRGALVMVRSNRYGWLPLATG 407 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE++VGY TLYGDM+GGF L D++K V+ LA N E+IP I+ Sbjct: 408 NKSELAVGYCTLYGDMAGGFAVLSDVFKRDVYALARHINDISGQ-------EIIPEHIIT 460 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSE 526 K PSAEL P Q DQ+SLP Y LD I++ +VE E+S + E VR+V L +E Sbjct: 461 KPPSAELAPDQFDQDSLPDYDTLDAILEGLVEREQSAAELSLHHPPEVVRWVLQKLDRNE 520 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQ P G K+T ++FG R P++ +F Sbjct: 521 FKRRQMPPGIKLTRRAFGSGRRMPMAARF 549 >gi|116754039|ref|YP_843157.1| NAD+ synthetase [Methanosaeta thermophila PT] gi|116665490|gb|ABK14517.1| NH(3)-dependent NAD(+) synthetase [Methanosaeta thermophila PT] Length = 567 Score = 576 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 204/563 (36%), Positives = 305/563 (54%), Gaps = 38/563 (6%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +++A+ Q+N VGD+ GN + R+A E DL + E+ + GYPP DL+ F+ Sbjct: 28 TMRVALLQINTTVGDLEGNASLIRKAVE---SLDADLAVTPEMALVGYPPRDLLLMPGFV 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPN 119 + + L D D ++VG P + + NS +L G++ + K LP Sbjct: 85 KNAWDVLTRLALDLEDSPP-MLVGIPEPNRSETGRPLFNSAALLADGSVKQIFRKTLLPT 143 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK--------KQGAEFL 171 Y F E R F + + GI ICEDIW + +I + + +GA+ Sbjct: 144 YDVFDEDRYFEPASGPQMLNLKGRTFGISICEDIWNDRDIFRRRRYHRDPLEDLRGADCF 203 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +++ASP+ K KR +++ +P+IYVNQVGG D+L+FDG S F +L Sbjct: 204 INMSASPFTAGKHLKREMMLSSIARKYGVPLIYVNQVGGNDDLVFDGRSCAFSPSGELIA 263 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + F E + + + DD + I + A VL RDYV+K Sbjct: 264 RAAAFEEDVLIVDID----SCSGSVSRDDFSPESEI--------WRALVLGTRDYVRKCG 311 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F +IGLSGG+DS+L AAIA +ALG ENV +++P YTS +S+EDA A+ L + Sbjct: 312 FRSAVIGLSGGVDSSLTAAIAAEALGPENVIGVLMPSPYTSRESMEDALELARNLSIQTI 371 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 +PI +++ + + + + ENIQ+RIRGN+LMALSN ++L+T NKSE+ Sbjct: 372 TIPISEIMAAYERTLEPIFRGVEKDVTEENIQARIRGNLLMALSNKFGHIVLSTGNKSEL 431 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDMSGGF L D+ KT V+++A W N G VIP S+LEK+PSA Sbjct: 432 AVGYCTIYGDMSGGFAVLSDVPKTMVYRMARWINMRGP---------VIPQSVLEKAPSA 482 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP Q DQ++LPPY LD+I+ R +E +S ++ + VRYV ++ +E+KR+ Sbjct: 483 ELRPGQRDQDTLPPYETLDEILHRHIEQRQSEEEIVSAGFDQKMVRYVLKMVKTAEFKRK 542 Query: 531 QAPVGTKITAKSFGRDRLYPISN 553 QAP G K+T ++FG PI+ Sbjct: 543 QAPPGIKVTDRAFGSGWRMPIAY 565 >gi|29832491|ref|NP_827125.1| NH(3)-dependent NAD(+) synthetase [Streptomyces avermitilis MA-4680] gi|29609610|dbj|BAC73660.1| putative NH(3)-dependent NAD(+) synthetase [Streptomyces avermitilis MA-4680] Length = 584 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 212/592 (35%), Positives = 313/592 (52%), Gaps = 44/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGDIAGN R + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A +A+ L + + G G ++VG+ + + N+ +L G + Sbjct: 61 FVEASRTALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLHRGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 ALTFAKHHLPNYGVFDEFRYFVPGDTMPIVRLHGVDIALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + Sbjct: 181 GLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------STMYIPLQE--------- 271 + + FSE + + ++ D S +P E Sbjct: 241 VVARAPQFSEGCVVLDLDLPAAEAEPPTGVVDDGLRIDRLVISEEPLPAYEAELAGGYAD 300 Query: 272 ----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 +E Y+A V+ LR YV KN F V+IGLSGGIDSAL AAIA DALG +NV + +P Sbjct: 301 RLDADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + + I + + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLG------LTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT +F+LA WRN Sbjct: 415 GTTLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSIFRLAEWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 475 AAERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDTGADAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 Y+ E V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R+H Sbjct: 532 AAGYDRELVVKTLRMVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWREH 583 >gi|282899433|ref|ZP_06307400.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cylindrospermopsis raciborskii CS-505] gi|281195697|gb|EFA70627.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Cylindrospermopsis raciborskii CS-505] Length = 559 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 225/569 (39%), Positives = 320/569 (56%), Gaps = 33/569 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GD+ GN K +A + L+L EL + GYPP DL+ F++ Sbjct: 1 MKIAIAQLNPIIGDLKGNCQKILETAYQA--NDVRLLLTPELSLCGYPPRDLLLNPGFVE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINL 117 A ++ L + ++VG + E + NSV L+ G I K L Sbjct: 59 AMDMSLQELAQNLPPH-LAVLVGTVVPNGEHHTRGGKNLFNSVAWLEKGKIQQYFHKRLL 117 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQG 167 P Y F EKR F G + + + +G+ ICED+W + N L G Sbjct: 118 PTYDVFDEKRYFEPGLNPNYFTLDGVNIGVTICEDLWNDEEFWGKKCYAVNPIADLSVVG 177 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K K R ++ + PIIY NQVGG D+LIFDG SF + Q Sbjct: 178 VDLIVNLSASPYTVGKQKTREAMLKHTAVNFQQPIIYTNQVGGNDDLIFDGYSFAVNSQG 237 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE--EEADYNACVLSLRD 285 ++ ++ + F+ + E+ Q ++ ++ DS + P+ E +E ++A VL ++D Sbjct: 238 EILYRGQGFTPDFLIVEF---NQHTKEVELASDSDQNLITPIYESEDEEIWHALVLGVKD 294 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 YV+K F +VI+GLSGGIDSAL AAIA ALGKENV +++P Y+S S+ DA + Sbjct: 295 YVKKCRFSQVILGLSGGIDSALVAAIATAALGKENVLGVLMPSPYSSQHSVSDALKLGQN 354 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG K +LPI +L+ F + + GI ENIQSRIRG +LMA+SN +LL+T Sbjct: 355 LGIKTQILPIGELMKSFDHTLFELFTGTEFGIAEENIQSRIRGVLLMAISNKFGYLLLST 414 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSEI+VGY TLYGDM+GG + D+ KT+V+ + +W N EVIP +IL Sbjct: 415 GNKSEIAVGYCTLYGDMNGGLAVIADVPKTRVYSICNWLNGQNQQ-------EVIPQNIL 467 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYG 524 K PSAEL+P QTDQ+SLPPY ILDDI++R++ +S ++ TV V L+ G Sbjct: 468 TKPPSAELKPGQTDQDSLPPYNILDDILQRLINQHQSVEEIIAGGHDLGTVNRVIKLVAG 527 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISN 553 SE+KRRQA G KIT ++FG PI+ Sbjct: 528 SEFKRRQAAPGLKITDRAFGTGWRMPIAA 556 >gi|317121464|ref|YP_004101467.1| NH(3)-dependent NAD(+) synthetase [Thermaerobacter marianensis DSM 12885] gi|315591444|gb|ADU50740.1| NH(3)-dependent NAD(+) synthetase [Thermaerobacter marianensis DSM 12885] Length = 617 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 223/614 (36%), Positives = 328/614 (53%), Gaps = 64/614 (10%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L+IAIAQ+N VGD+ GN K EA R G DL++F EL ++GYPPEDL+F+ +F+ Sbjct: 8 PLRIAIAQVNSTVGDLEGNARKLAAFAAEAARAGADLVVFPELALTGYPPEDLIFRPAFL 67 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + L G +VGF +D++ + N+ +L G + AV K LPNY F Sbjct: 68 AESGRWLQWLAGQLA-AGPVALVGFVHRDRD-LYNAAAVLQGGRVRAVACKRFLPNYGVF 125 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-AEFLFSLNASPYYHN 182 E+R F G+ + + LG+ ICED+W + G AE L +L+ASPY+ Sbjct: 126 DEERYFAPGHRALVLRLAGVTLGVSICEDLWYPEGPTREQALAGGAEILVNLSASPYHAG 185 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K ++R ++ + + + + I+Y N VGGQDEL+FDG S ++A + + F+E + Sbjct: 186 KPRERESLMVTRATDLGVAIVYANLVGGQDELVFDGNSLVVTAAGEVAARGRPFAEDLIL 245 Query: 243 TEWH---------YDQQLSQWNYMSDDSASTMYIPLQEEEA------------------- 274 ++ ++ + ++A + L A Sbjct: 246 WDYDPEAAAVARWHEPRWRHMPATEQEAARVERVDLDGAAAGGAAPGPATGGATAQAVEP 305 Query: 275 -------------------------DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 Y A VL++RDY KN + +GLSGGIDSAL A Sbjct: 306 AGGGPRPPKPPLPPRQVEVLEGEAEIYAALVLAVRDYFGKNRIGRAWLGLSGGIDSALVA 365 Query: 310 AIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 +A DALG E V + +P +TS +SL+DA A A+ LG + +PI + + F ++ Sbjct: 366 CLAADALGPERVTGVRMPSPFTSEESLQDAEAVARNLGIGLETIPIAGVFDAFRQALAPL 425 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 + EN+Q+RIRG +LMAL+N ++L T NKSE++ GY TLYGDM+GGF PL Sbjct: 426 FGGRSFDVAEENLQARIRGTLLMALANKFGGIVLATGNKSELATGYATLYGDMAGGFAPL 485 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPIL 489 KD+ KT V++LA++RN P VIP S+L K+P+AELRP Q D++SLPPY +L Sbjct: 486 KDVPKTLVYRLAAYRNGW-------PGGPVIPESVLRKAPTAELRPGQKDEDSLPPYAVL 538 Query: 490 DDIIKRIVENE-ESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRL 548 D I++ VE + + + + V HL+ SEYKRRQA G KIT ++FGRDR Sbjct: 539 DPILEAYVEKDVPAATLVARGHPAGAVARAVHLVRASEYKRRQAAPGPKITTRAFGRDRR 598 Query: 549 YPISNKFRDHISEE 562 YPI+N FR+ + +E Sbjct: 599 YPITNGFREPVPQE 612 >gi|308270584|emb|CBX27196.1| Probable glutamine-dependent NAD(+) synthetase [uncultured Desulfobacterium sp.] Length = 558 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 211/567 (37%), Positives = 313/567 (55%), Gaps = 31/567 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NPV+GD N + +A +Q DL++F EL ++GYPP DL+ KK FI+ Sbjct: 8 MKIAIAQINPVIGDFEYNFNLIKSFAGKAIKQNCDLVVFPELSVTGYPPRDLLEKKDFIE 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYSE 122 A S + L + G G++ GF + EG + NS V+ + G I+ +K LP Y Sbjct: 68 ANLSYLSRLVDEIR--GIGVICGFADKADEGNLLYNSAVLFENGKILHKTNKRLLPTYDV 125 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEFLF 172 F E R F +G P ++D +GI ICED W + N + K GA + Sbjct: 126 FDESRYFEAGAEFAPYSYKDKIIGIAICEDAWNDDNSSGEKKYHLNPVSLMIKNGANLII 185 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASP++ K + R + +P I+ NQVGG D ++FDG S FD ++ Sbjct: 186 NISASPFHMGKQQFRQNMFGAIARKYKVPFIFANQVGGNDSVLFDGTSAVFDTNGRIIAL 245 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 + F + + M SAS A V+ RDYV K F Sbjct: 246 ARDFDQDLIFYDTDNPSGNLLQENMHPVSASNTEA-------VLKALVMGTRDYVTKCGF 298 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 KV++GLSGGIDSA+ A IA A+G ENV T+ +P YTS ++ D A+ +G KY++ Sbjct: 299 SKVVLGLSGGIDSAITAFIAAQAIGPENVLTVFMPSSYTSKENYGDTQKLAQNIGTKYEI 358 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI + F L+S ++ + +NIQ+RIRG ILMALSN +LL+T NKSE++ Sbjct: 359 IPIDSVFEGFLKLVSPSFKQNEPEVTEQNIQARIRGTILMALSNRENRILLSTGNKSELA 418 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGDM+GG + D+ KT V++++ + N E IP +I++K+PSAE Sbjct: 419 VGYCTLYGDMNGGLAVISDIPKTIVYEISHFINRS---------KETIPANIIKKAPSAE 469 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 L+P QTDQ+ LPPY +LD I+K +E+ + Q ++ +TV+ V + +EYKR Q Sbjct: 470 LKPDQTDQDDLPPYDLLDAILKGYIEDLKGAKELIAQGFDAKTVKDVILRVDRNEYKRHQ 529 Query: 532 APVGTKITAKSFGRDRLYPISNKFRDH 558 A G K+T+K+FG R YP++ ++ Sbjct: 530 AAPGLKVTSKAFGYGRRYPLAQRYTQR 556 >gi|172037669|ref|YP_001804170.1| NAD synthetase [Cyanothece sp. ATCC 51142] gi|171699123|gb|ACB52104.1| NH(3)-dependent NAD(+) synthetase [Cyanothece sp. ATCC 51142] Length = 562 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 210/577 (36%), Positives = 318/577 (55%), Gaps = 42/577 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GDI N + + A + +L+L EL + GYPP+DL+F F++ Sbjct: 1 MKIAIAQLNPIIGDIENNAQHIYKVAQIAVERKAELLLTPELSLCGYPPKDLLFNTGFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEG---VLNSVVILDAGNIIAVRDKINL 117 ++ L ++VG P +EG + NS+V+++ I + K L Sbjct: 61 KLQIELEKLAKQLPKK-LAVLVGTVTENPHAYREGEKPLFNSIVLIENQAIKQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVF-------RDIRLGILICEDIWKNS----------NIC 160 P Y F E R F G ++ + I++G+ +CED+W + N Sbjct: 120 PTYDVFDEDRYFEPGKESNFFQLSSHDSNSKPIKIGVTVCEDLWNDEEFWGKRNYETNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L G + + +L+ASPY K K R ++ +PIIY NQVGG D+LIFDG S Sbjct: 180 QDLVNNGVDLVVNLSASPYSIGKQKVRESMLKYTAQRHQVPIIYTNQVGGNDDLIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F + ++ + K F E + + +Y++D EE ++A V Sbjct: 240 FAVNKNGEITLRAKGFQTAIETIECDDNNHDFKISYIADSI-------ETEEAEIWSALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DY K F K ++GLSGGIDS+L AAIA +ALGKENV I++P Y+S S+ DA Sbjct: 293 LGLKDYAHKCGFSKAVLGLSGGIDSSLVAAIAAEALGKENVLGILMPSPYSSSHSISDAE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A LG K LPI D++ + S++ + G+ EN+QSRIRGN+LMA++N Sbjct: 353 ALVNNLGIKRYTLPIKDVMKAYDSILEPLFKGTEFGVAEENLQSRIRGNLLMAIANKFGH 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H E+I Sbjct: 413 LLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFHLCKWLNRHQ---------EII 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETVRYVE 519 P ++L K PSAEL+P Q DQ+SLP Y ILD I+ R++ +S + ++ + + V Sbjct: 464 PRNVLIKPPSAELKPDQVDQDSLPSYDILDGILDRLIHRHQSIKEIEAAGFDYDIICKVV 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KR+QAP G K++ ++FG PI+++++ Sbjct: 524 KLVTRAEFKRKQAPPGLKVSDRAFGTGWRMPIASRWK 560 >gi|239931662|ref|ZP_04688615.1| NH(3)-dependent NAD(+) synthetase [Streptomyces ghanaensis ATCC 14672] Length = 588 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 211/592 (35%), Positives = 312/592 (52%), Gaps = 44/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+ GN R + +G L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSRVGDLDGNTETILRWTRHSAERGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A +A+ +L + + G G +VVG+ + N+ +L G + Sbjct: 61 FVEASRAALRSLAARLAEEGFGELPVVVGYLDRSAAAQPKYGQPAGAPQNAGAVLYGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 VLAFAKHHLPNYGVFDEFRYFVPGDTMPVVRVHGVDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R E+V + Y+ GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLELVRKRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGA 240 Query: 229 LAFQMKHFSEQNFMTEW------------HYDQQLSQWNYMSDDSASTMYIPLQ------ 270 + + F+E F+ + D L + ++ Y P Q Sbjct: 241 VVTRAPQFTEGCFVVDLDLPAAAADAPTGTVDDGLRIDRVVLSEAPLPAYEPEQAGGCAE 300 Query: 271 ---EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 ++E Y+A V+ LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYVEKNGFESVLIGLSGGIDSALVAAIACDAVGAENVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSGHSRDDAAELARRTGLNYRTVAIEPMFDAYMGALG------LTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMALSN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTLLMALSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLARWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 475 AQERGETP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDRGADEIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 ++ E V ++ +EYKRRQ P GTKI+ K FG+DR PI+N +R+ Sbjct: 532 AAGFDRELVAKTLRMVDRAEYKRRQYPPGTKISPKGFGKDRRLPITNGWREQ 583 >gi|134094248|ref|YP_001099323.1| NAD synthetase [Herminiimonas arsenicoxydans] gi|133738151|emb|CAL61196.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) [Herminiimonas arsenicoxydans] Length = 537 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 231/556 (41%), Positives = 323/556 (58%), Gaps = 22/556 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +K+AIAQ+N VGD+AGN AK A QG D++L EL + GYPPEDL+ ++SF Sbjct: 2 TVKVAIAQINSTVGDLAGNRAKIAEFSRRAAEQGADIVLTPELSLVGYPPEDLLLRQSFY 61 Query: 64 QACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + A+D L +D + +VVG P + N+ +L G I A K +LPN + Sbjct: 62 AKSAQALDALAADLAELKNLHVVVGHPFEKDGQRFNAASVLLNGKISATYCKHDLPNATV 121 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F S + +R GI ICED W + A+ L N SPY+ N Sbjct: 122 FDEKRYFSSCDQAVVFDVKGVRFGINICEDTWFPQAPARAAAAG-AQVLLVPNGSPYHMN 180 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R +++ ++ + ++Y N VG QDELIFDG SF D + Q++H E + Sbjct: 181 KQHVRIDVMHANVTTHGMSLVYANLVGAQDELIFDGNSFVLDQAGETRAQLQHCVEDLQI 240 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 E+ Q L + + Y A VL +RDY+ KN F +IG+SGG Sbjct: 241 VEFRGGQPLDGTIVEEPSVEAQV----------YKALVLGVRDYIGKNGFPGALIGMSGG 290 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +DSAL A+AVDALG + V+TIM+P YT+ SL D+ + +G +YD + I+D F Sbjct: 291 VDSALTLAVAVDALGADKVRTIMMPSPYTAEISLLDSRDMVQRVGVRYDEIGINDCFEAF 350 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + P ENIQ+RIRG ILMALSN A++LTT NKSE++VGY TLYGDM Sbjct: 351 NRTLANEFKGLPEDATEENIQARIRGTILMALSNKHGAIVLTTGNKSEMAVGYCTLYGDM 410 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF LKD+ KT V++L ++RNS +++VIP IL ++PSAELRP QTDQ+S Sbjct: 411 AGGFAVLKDIAKTLVYRLCAYRNS---------VSDVIPERILTRAPSAELRPGQTDQDS 461 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY ILD I++ +E +S + Y E V + HL+ +EYKRRQ+PVG ++T + Sbjct: 462 LPPYDILDAIMQMYMEENQSGADIIAAGYRAEDVARITHLIKINEYKRRQSPVGIRVTHR 521 Query: 542 SFGRDRLYPISNKFRD 557 +FGRD YPI++KFR+ Sbjct: 522 AFGRDWRYPITSKFRE 537 >gi|255261836|ref|ZP_05341178.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Thalassiobium sp. R2A62] gi|255104171|gb|EET46845.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Thalassiobium sp. R2A62] Length = 554 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 229/561 (40%), Positives = 324/561 (57%), Gaps = 11/561 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQ+NP VGD+ GN KA A + G D+++ E+F+ GY +DLV K Sbjct: 1 MPDQFRLTMAQMNPTVGDLVGNADKAFAAWQMGVDAGSDMVVCPEMFLIGYQAQDLVMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLP 118 +F+ + + L + D G + VG P D + N+ IL G + A K LP Sbjct: 61 AFVHSAMDMVMNLAARCAD-GPSLGVGAPFLDPESGRLYNAYWILKGGKVAARMLKHFLP 119 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASP 178 N++ F E R F G + P +R+G ICED W ++C+ + + GAE L N SP Sbjct: 120 NFNVFDEVRLFNRGATQGPYDVGGVRIGSPICEDAW-YVDVCETMVESGAEILVIPNGSP 178 Query: 179 YYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSE 238 Y+ +K R + ++ +P++Y+N VGGQD+ +FDG SF + +LA QM F E Sbjct: 179 YFRDKFDIRMNHMVSRVIENDVPLVYLNMVGGQDDQVFDGGSFVLNRGGKLALQMPTFDE 238 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 H D + + + + E++ Y CV LRDY+ K F KV++G Sbjct: 239 AY----AHVDFTRTSDGWEAIEGERATLPDSLEQD--YRVCVEGLRDYMGKTGFKKVLLG 292 Query: 299 LSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 LSGGIDSA+ A IA DALG NV+ +MLP +YTS SL+DAA CA +GC D + I Sbjct: 293 LSGGIDSAIVATIAADALGPGNVRCVMLPSEYTSQASLDDAAQCAHNIGCNLDTVSIAGP 352 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 ++ + G+ ENIQSR+RG +LMA SN MLLTT NKSE++VGY T+ Sbjct: 353 RAAVTDALAPLFEGLEEGLTEENIQSRLRGVLLMAQSNKFGEMLLTTGNKSEVAVGYATI 412 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQT 478 YGDMSGG+NP+KD+YKT+VF + WRN++ + P ++P I+EK P+AELR Q Sbjct: 413 YGDMSGGYNPIKDMYKTRVFDICRWRNANHRPWMMAPAGTMVPVEIIEKPPTAELREDQK 472 Query: 479 DQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTK 537 D +SLPPY ILD I+ +V+ E S + Y ETV+ VEHL+Y SEYKR Q+ G + Sbjct: 473 DSDSLPPYDILDGILTMLVDQEASVADCVAVGYERETVKKVEHLIYISEYKRFQSAPGPR 532 Query: 538 ITAKSFGRDRLYPISNKFRDH 558 +T +F DR YPI N++RDH Sbjct: 533 LTDSAFWLDRRYPIVNRWRDH 553 >gi|33601488|ref|NP_889048.1| NAD synthetase [Bordetella bronchiseptica RB50] gi|33575924|emb|CAE33003.1| putative NAD synthetase [Bordetella bronchiseptica RB50] Length = 544 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 227/560 (40%), Positives = 326/560 (58%), Gaps = 18/560 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ IAQ+N VGD+AGN A+ +A +A QG D+++ EL ++GYPPEDL+ + Sbjct: 1 MSLARVGIAQINACVGDLAGNAARVLQAARQAAGQGADVLVTPELVLTGYPPEDLLLRPR 60 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 FIQ + + L D G +V+G Q+ + N+ ++ G ++ K LPNY Sbjct: 61 FIQEQQAVFERLCQDLAGLAGLHVVIGHVLARQDRLYNAATVVCEGRVLGSYCKRELPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F E+R F + + +R G+ ICEDIW A+ L NASPY Sbjct: 121 SVFDEQRYFSAHGEAFGFTVKGVRFGLNICEDIWFERAPRAAAADG-AQVLLVPNASPYN 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K ++R + + +IY N VGGQDEL+FDGASF D Q +++ ++ F+E Sbjct: 180 TGKQEERLSVARRSVQDTGCALIYANLVGGQDELVFDGASFALDAQGRMSARLPDFTEGV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E + + P EE +NA VL +RDY+ KN F IIGLS Sbjct: 240 NVLEVD------ARGTVRPVTEQAAVQPYGLEEQVWNALVLGVRDYLGKNGFPGAIIGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A+AVDA+G +NV+ +M+P +YT+ SL DAA A+ LG +YDV+ I ++V+ Sbjct: 294 GGIDSAVVLAVAVDAVGADNVRAVMMPSRYTADISLTDAADMARRLGVQYDVIAIGEVVD 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ P ENIQ+R RG +LMALSN + ++LTT NKSE++ GY TLYG Sbjct: 354 RFEAALAPQFAGLPVDATEENIQARARGTLLMALSNKTGRLVLTTGNKSEMTTGYCTLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF +KD+ KT V++LA+WRN +IP I+ + PSAELRP QTDQ Sbjct: 414 DMAGGFAVIKDVPKTLVYRLANWRNRRQP---------IIPERIITRPPSAELRPDQTDQ 464 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD II+R +E+ S + + E V V L+ +EYKRRQAP G +IT Sbjct: 465 DSLPPYDILDGIIERYMEHNASAADIVAAGFPREAVGQVVRLIRINEYKRRQAPPGPRIT 524 Query: 540 AKSFGRDRLYPISNKFRDHI 559 ++FGRD YP++N FR+ + Sbjct: 525 PRAFGRDWRYPVTNGFRETV 544 >gi|33593664|ref|NP_881308.1| NAD synthetase [Bordetella pertussis Tohama I] gi|33563737|emb|CAE42977.1| putative NAD synthetase [Bordetella pertussis Tohama I] gi|332383068|gb|AEE67915.1| NAD synthetase [Bordetella pertussis CS] Length = 544 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 227/560 (40%), Positives = 326/560 (58%), Gaps = 18/560 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ IAQ+N VGD+AGN A+ +A +A QG D+++ EL ++GYPPEDL+ + Sbjct: 1 MSLARVGIAQINACVGDLAGNAARVLQAARQAAGQGADVLVTPELVLTGYPPEDLLLRPR 60 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 FIQ + + L D G +V+G Q+ + N+ ++ G ++ K LPNY Sbjct: 61 FIQEQQAVFERLCQDLAGLAGLHVVIGHVLARQDRLYNAATVVCEGRVLGSYCKRELPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F E+R F + + +R G+ ICEDIW A+ L NASPY Sbjct: 121 SVFDEQRYFSAHGEAFGFTVKGVRFGLNICEDIWFERAPRAAAADG-AQVLLVPNASPYN 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K ++R + + +IY N VGGQDEL+FDGASF D Q +++ ++ F+E Sbjct: 180 TGKQEERLSVARRSVQDTGCALIYANLVGGQDELVFDGASFALDAQGRMSARLPDFTEGV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E + + P EE +NA VL +RDY+ KN F IIGLS Sbjct: 240 NVLEVDARSTVRPV------TEQAAVQPYGLEEQVWNALVLGVRDYLGKNGFPGAIIGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A+AVDA+G +NV+ +M+P +YT+ SL DAA A+ LG +YDV+ I ++V+ Sbjct: 294 GGIDSAVVLAVAVDAVGADNVRAVMMPSRYTADISLTDAADMARRLGVQYDVIAIGEVVD 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ P ENIQ+R RG +LMALSN + ++LTT NKSE++ GY TLYG Sbjct: 354 RFEAALAPQFAGLPVDATEENIQARARGTLLMALSNKTGRLVLTTGNKSEMTTGYCTLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF +KD+ KT V++LA+WRN +IP I+ + PSAELRP QTDQ Sbjct: 414 DMAGGFAVIKDVPKTLVYRLANWRNQRQP---------IIPERIITRPPSAELRPDQTDQ 464 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD II+R +E+ S + + E V V L+ +EYKRRQAP G +IT Sbjct: 465 DSLPPYDILDGIIERYMEHNASAADIVAAGFPREAVGQVVRLIRINEYKRRQAPPGPRIT 524 Query: 540 AKSFGRDRLYPISNKFRDHI 559 ++FGRD YP++N FR+ + Sbjct: 525 PRAFGRDWRYPVTNGFRETV 544 >gi|300193273|pdb|3N05|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Streptomyces Avermitilis gi|300193274|pdb|3N05|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From Streptomyces Avermitilis Length = 590 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 212/592 (35%), Positives = 312/592 (52%), Gaps = 44/592 (7%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +L++A+ Q++ VGDIAGN R + QG L+ F E+ ++GYP EDL + Sbjct: 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRS 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGN 107 SF++A +A+ L + + G G ++VG+ + + N+ +L G Sbjct: 61 SFVEASRTALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLHRGR 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 + K +LPNY F E R F+ G + + + + + ICED+W++ + G Sbjct: 121 VALTFAKHHLPNYGVFDEFRYFVPGDTMPIVRLHGVDIALAICEDLWQDGGRVPAARSAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 A L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D Sbjct: 181 AGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------STMYIPLQE-------- 271 ++ + FSE + + ++ D S +P E Sbjct: 241 EVVARAPQFSEGCVVLDLDLPAAEAEPPTGVVDDGLRIDRLVISEEPLPAYEAELAGGYA 300 Query: 272 -----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 +E Y+A V+ LR YV KN F V+IGLSGGIDSAL AAIA DALG +NV + + Sbjct: 301 DRLDADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSM 360 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P KY+S S DAA A+ G + + I + + + + + +G+ EN+QSR+ Sbjct: 361 PSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLG------LTGLAEENLQSRL 414 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT +F+LA WRN Sbjct: 415 RGTTLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSIFRLAEWRNR 474 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 475 AAAERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDTGADAI 531 Query: 507 -DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 Y+ E V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 532 VAAGYDRELVVKTLRMVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWRE 583 >gi|284991820|ref|YP_003410374.1| NAD+ synthetase [Geodermatophilus obscurus DSM 43160] gi|284065065|gb|ADB76003.1| NAD+ synthetase [Geodermatophilus obscurus DSM 43160] Length = 611 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 220/605 (36%), Positives = 320/605 (52%), Gaps = 57/605 (9%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +L++A+AQ++ VGDIAGN A A G +++F E+ ++GYPPEDLV ++SF Sbjct: 6 QLRVALAQVDTRVGDIAGNAALVTTWTAIAAEDGAHVVVFPEMTLTGYPPEDLVLRESFA 65 Query: 64 QACSSAIDTLKSDTHDGGAG---IVVGF------------------------PRQDQEGV 96 QA A+ L D + G G +VVG+ + Sbjct: 66 QASEKALVELAGDLAERGLGDTAVVVGYLAHTEGIGPATTESMPGDDDRPADANPRRGAP 125 Query: 97 LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN 156 N+ +L G ++ K +LPNY F E R F+ G + + + + +CED+W Sbjct: 126 RNAAALLHGGEVVVRYHKRHLPNYGVFDEARYFVPGTELPVVRLHGVDVALTVCEDLWVE 185 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 C + G + + S NASPY K R +V + + ++Y NQVGGQDEL+F Sbjct: 186 GGPCGVAGEAGVDLVLSPNASPYERAKDDLRLPLVRRRAAEARATVVYCNQVGGQDELVF 245 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM------------------- 257 DG S +L + F E + D+ Sbjct: 246 DGDSMAVAPDGELLGRAPQFVEHLLCVDLRVDRSAVPDRREGRFGPMTVTRHVLSEEPVP 305 Query: 258 -SDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 D +++ PL + E + A VL LRD++ KN V++GLSGGIDSA+CAA+AVDAL Sbjct: 306 AFDPRPASVAEPLSDCEEVWRALVLGLRDFIDKNGMPSVVLGLSGGIDSAVCAALAVDAL 365 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 G + V + LP +Y+S SL DA A+ G Y V+PI +V+ + S + E SG Sbjct: 366 GADRVYGVGLPSRYSSEHSLADAEDLARRTGLHYSVVPIAPMVDAYHSSV------ELSG 419 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 + AEN+Q+R+RG +LM LSN +LLTT NKSEI+VGY TLYGD +GGF P+KD+ KT Sbjct: 420 VAAENLQARVRGTLLMGLSNQHGHLLLTTGNKSEIAVGYSTLYGDSAGGFAPIKDVPKTL 479 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 V+ LA WRN + G TE IP + +EK PSAEL P Q D +SLP Y LD ++ Sbjct: 480 VWALARWRNEYARGRG---ETEPIPVNSIEKPPSAELAPGQVDTDSLPSYEELDAVVADY 536 Query: 497 VENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V+ + ++ ++ E V V L+ +E+KRRQ+ GTKI+ K+FGRDR P++N++ Sbjct: 537 VDRDLGMGELLERGHDPEVVARVLRLVDAAEFKRRQSAPGTKISLKAFGRDRRLPVTNRW 596 Query: 556 RDHIS 560 R+ + Sbjct: 597 RETLP 601 >gi|332705803|ref|ZP_08425879.1| NH(3)-dependent NAD [Lyngbya majuscula 3L] gi|332355595|gb|EGJ35059.1| NH(3)-dependent NAD [Lyngbya majuscula 3L] Length = 626 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 220/626 (35%), Positives = 319/626 (50%), Gaps = 76/626 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP +GDI GN + A Q + L+L EL + GYPP DL+ F + Sbjct: 1 MKIAIAQLNPTIGDITGNAQRILEVANTAASQDVRLLLTPELSLCGYPPRDLLLNPKFRE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-------RQDQEGVLNSVVILDAGNIIAVRDKINL 117 + ++ + L ++VG + + NS+ +L+ G + + K L Sbjct: 61 SMTTQVQQLAQQLP-LSLAVLVGTVTPNTKAELAGGKPLYNSIALLEGGKVRQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRD-------------IRLGILICEDIWKNS------- 157 P Y F E R F G ++ I++G+ ICED+W + Sbjct: 120 PTYDVFDENRYFEPGRESNSFTIDHQPSAITTQNAHSPIKIGVTICEDLWNDEEFWGKRS 179 Query: 158 ---NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL 214 N L +QG + + +L+ASPY K K R ++ S H PI+Y NQ+GG D+L Sbjct: 180 YQVNPITDLVQQGVDLVVNLSASPYSAGKQKTREAMLRHSASRYHTPILYANQLGGNDDL 239 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQ----LSQWNYMSDDSASTMYIPLQ 270 IFDG S F+ ++ + + F + E+ + + S SA+ P Sbjct: 240 IFDGCSVAFNQAGEMVCRARAFETDLVILEYDRETHDLVTPPETTIESPPSAAIAPAPAS 299 Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 +E ++A VL +RDY +K F KV+IGLSGGIDSAL AAIA ALG ENV I++P Y Sbjct: 300 LDEEIWSALVLGVRDYTRKCGFKKVVIGLSGGIDSALVAAIATAALGPENVLGILMPSPY 359 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 +S S++DA + A+ LG K L I L+ F ++ G+ ENIQSRIRG + Sbjct: 360 SSDHSVKDALSLAQNLGIKTHTLAIGSLMEGFDQTLTSLFAGTEFGVAEENIQSRIRGTL 419 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT 450 LMA++N +LL+T NKSE++VGY TLYGDM+GG + D+ KT+V+ L W NS Sbjct: 420 LMAIANKFGYLLLSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVYSLCRWLNSRAEE 479 Query: 451 S--------------------------------------GLGPL--TEVIPPSILEKSPS 470 S G PL TE+IP +IL K PS Sbjct: 480 SQVNQKLQVSTLNLEPSDSSSKLQADQRQPANLTDSNAKGEQPLSQTEIIPANILIKPPS 539 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AEL+P Q DQ+SLP Y ILDDI++R+++ ++ D + E V + L+ E+KR Sbjct: 540 AELKPGQVDQDSLPSYDILDDILERLIQQHQAPEQIIDAGHQPEVVHKIIRLVARVEFKR 599 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKF 555 RQAP G K+T ++FG PI++++ Sbjct: 600 RQAPPGLKVTDRAFGTGWRMPIASRW 625 >gi|117620870|ref|YP_855239.1| NAD synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562277|gb|ABK39225.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 540 Score = 574 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 227/556 (40%), Positives = 332/556 (59%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L + +AQLN VG I N K A EA+RQG DL++ +EL ++GYPPEDL+ + Sbjct: 1 MAKALSLMLAQLNLTVGAIEDNCDKVLAAAAEADRQGADLLVCSELALTGYPPEDLLLRV 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + +A+ L + G I+VG P +D E + N+ + + G ++A K +LPNY Sbjct: 61 DLMIRVEAALARLAAW--QGACAILVGHPWRDGEALYNAASLYEQGKLVARYFKQDLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F + + FR +LG+LICED+W+ ++NASPY Sbjct: 119 GVFDEKRYFTAATETCVVPFRGHQLGLLICEDLWQPGPALAAKAAGAELL-LTINASPYD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R E++ + LP++Y+NQV GQDELIFDG S F+ Q +L ++ F+E+ Sbjct: 178 QEKPWIRRELMAERCDQTGLPLVYLNQVCGQDELIFDGCSKVFNSQGELTHKLAPFAEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + Q + + PL+ Y A VL++RDYV KN FH ++GLS Sbjct: 238 ALVRFADGQPVKE---------REPAAPLEPLAETYQALVLAVRDYVTKNGFHGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G + VQ +M+P++YT+ S+EDA A+ +G +++++ I + Sbjct: 289 GGIDSALTLAIAADAIGADKVQAVMMPFRYTAQMSVEDAKEQAERMGVEFNIISIEPMFE 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 GFMAQLAPLFEGTARDTTEENLQARCRGVLLMALSNKRRCIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L +RNS + VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLCEYRNS---------VDYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I+KR VE + S + + + + VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILKRYVEEDASVADMVAEGFEEAVVRKVIRLVDLNEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|291440029|ref|ZP_06579419.1| NAD(+) synthase [Streptomyces ghanaensis ATCC 14672] gi|291342924|gb|EFE69880.1| NAD(+) synthase [Streptomyces ghanaensis ATCC 14672] Length = 615 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 211/591 (35%), Positives = 311/591 (52%), Gaps = 44/591 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L++A+ Q++ VGD+ GN R + +G L+ F E+ ++GYP EDL + SF Sbjct: 29 PQLRLALNQIDSRVGDLDGNTETILRWTRHSAERGAHLVAFPEMVLTGYPVEDLALRSSF 88 Query: 63 IQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNII 109 ++A +A+ +L + + G G +VVG+ + N+ +L G ++ Sbjct: 89 VEASRAALRSLAARLAEEGFGELPVVVGYLDRSAAAQPKYGQPAGAPQNAGAVLYGGEVV 148 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 149 LAFAKHHLPNYGVFDEFRYFVPGDTMPVVRVHGVDVALAICEDLWQDGGRVPAARSAGAG 208 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY K R E+V + Y+ GGQDEL+FDG S D + Sbjct: 209 LLLSINASPYEREKDDTRLELVRKRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGAV 268 Query: 230 AFQMKHFSEQNFMTEW------------HYDQQLSQWNYMSDDSASTMYIPLQ------- 270 + F+E F+ + D L + ++ Y P Q Sbjct: 269 VTRAPQFTEGCFVVDLDLPAAAADAPTGTVDDGLRIDRVVLSEAPLPAYEPEQAGGCAER 328 Query: 271 --EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 ++E Y+A V+ LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV + +P Sbjct: 329 LDDDEEVYSALVVGLRAYVEKNGFESVLIGLSGGIDSALVAAIACDAVGAENVYGVSMPS 388 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR+RG Sbjct: 389 KYSSGHSRDDAAELARRTGLNYRTVAIEPMFDAYMGALG------LTGLAEENLQSRLRG 442 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +LMALSN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 443 TLLMALSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLARWRNRAA 502 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-D 507 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 503 QERGETP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDRGADEIVA 559 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 ++ E V ++ +EYKRRQ P GTKI+ K FG+DR PI+N +R+ Sbjct: 560 AGFDRELVAKTLRMVDRAEYKRRQYPPGTKISPKGFGKDRRLPITNGWREQ 610 >gi|294629011|ref|ZP_06707571.1| glutamine-dependent NAD(+) synthetase [Streptomyces sp. e14] gi|292832344|gb|EFF90693.1| glutamine-dependent NAD(+) synthetase [Streptomyces sp. e14] Length = 591 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 210/592 (35%), Positives = 306/592 (51%), Gaps = 44/592 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L++A+ Q++ VGD+A N R + QG L+ F E+ ++GYP EDL + SF Sbjct: 9 PQLRLALNQIDSRVGDLAANAESILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSF 68 Query: 63 IQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNII 109 + A +A+ L + G G +VVG+ + + N+ +L G ++ Sbjct: 69 VTASRTALRELAARLAGEGLGELPVVVGYLDRSESAQPKYGMPAGAPRNAAAVLHRGEVV 128 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G + + + + + ICED+W++ + A Sbjct: 129 LTFAKHHLPNYGVFDEFRYFVPGDTMPVLRVHGVDVALAICEDLWQDGGRVPAARTARAG 188 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY K R E+V + Y+ GGQDEL+FDG S ++ Sbjct: 189 LLLSVNASPYEREKDDTRLELVRKRAQEAGCTTAYLAMTGGQDELVFDGDSIVVGADGEV 248 Query: 230 AFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIPLQ------- 270 + F E + + D L + + Y P+ Sbjct: 249 IARAAQFEETCVVLDLELPAAAADAPSGVVDDGLRVDRVVLSEEPLPAYEPVPAAGCGER 308 Query: 271 --EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 ++E Y A V LR YV KN F V+IGLSGGIDSAL AAIA DA+G ENV + +P Sbjct: 309 LDDDEEVYTALVTGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDAVGPENVYGVSMPS 368 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 KY+S S +DAA A+ G + +PI + + + + +G+ EN+QSR+RG Sbjct: 369 KYSSEHSKDDAAELARRTGLNFRTVPIVPMFDAYMDSLG------LTGLAEENLQSRLRG 422 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +LMALSN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 423 TLLMALSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAKWRNRAA 482 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-D 507 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ ++ Sbjct: 483 AERGQTP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDKGADEIVA 539 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y+ E V ++ +EYKRRQ P GTKI+ K FG+DR PI+N +R+H+ Sbjct: 540 AGYDPELVARTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPITNGWREHL 591 >gi|256832713|ref|YP_003161440.1| NAD+ synthetase [Jonesia denitrificans DSM 20603] gi|256686244|gb|ACV09137.1| NAD+ synthetase [Jonesia denitrificans DSM 20603] Length = 553 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 220/568 (38%), Positives = 324/568 (57%), Gaps = 28/568 (4%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + + +AIAQ++ VGDIAGNI K EA RQG DL++F E+ I+GYP EDL + S Sbjct: 1 MTDVTVAIAQIDTCVGDIAGNIDKIVDFAGEAARQGADLVVFPEMTITGYPIEDLALRGS 60 Query: 62 FIQACSSAIDTLKSDTHDGG---AGIVVG----FPRQDQ---EGVLNSVVILDAGNIIAV 111 F +A + + + G +++G D N V+L G++ A Sbjct: 61 FQRAAEHGLSVVAKRLVEEGHEHLTVILGTLGSLALSDHVQMPRPTNRAVVLSGGSVTAA 120 Query: 112 RDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171 DK +LPNY F E R F SG + I R+G+ ICEDIW++ K+L+ + + L Sbjct: 121 YDKHHLPNYGVFDEYRIFASGDTTTVITVGGHRIGLAICEDIWQDGGPVKNLEDENIDLL 180 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +LN SPY K ++R ++ + + + P++Y NQVGGQD+L+FDG SF + Sbjct: 181 VTLNGSPYEEGKRQQRIDLAAQRAAALGAPLVYANQVGGQDDLVFDGGSFVVGPSGAVLA 240 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + F E + + + +D + +E Y A V L+ YV+KN Sbjct: 241 RAPKFEEHLLL--------WTLTDSPHEDHTGDVTEFTDLDEEVYTALVTGLQGYVRKNG 292 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F V++GLSGGIDSAL AAIA DALG ENV + +P Y+S S +DAA A+ +G Y Sbjct: 293 FTSVVLGLSGGIDSALVAAIAADALGGENVYGVSMPSNYSSQHSQDDAADLAQRIGAHYR 352 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V I +V+ F S ++ G+ EN+Q+R+RG LMALSN ++L T NK+E+ Sbjct: 353 VQHIAPMVDAFQSQLN------LEGVAEENLQARVRGMTLMALSNSEGHLVLATGNKTEL 406 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGD GG+ P+KD+ K++V+QL+ WRN+ + G P IP S + K PSA Sbjct: 407 AVGYSTIYGDAVGGYAPIKDVDKSRVWQLSRWRNTVAVDRGDIP---PIPESSITKPPSA 463 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRR 530 ELRP Q DQ+SLPPY +LD ++ +E+EE + + E V V L+ +E+KRR Sbjct: 464 ELRPGQVDQDSLPPYDLLDQVLDAHIEHEEGREELLARGFAPEIVDKVVSLVDRAEWKRR 523 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFRDH 558 Q P+G K+TA +FGRDR P+++++R+ Sbjct: 524 QYPLGPKVTALAFGRDRRVPVTSRWREP 551 >gi|312134229|ref|YP_004001567.1| nad+ synthetase [Caldicellulosiruptor owensensis OL] gi|311774280|gb|ADQ03767.1| NAD+ synthetase [Caldicellulosiruptor owensensis OL] Length = 540 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 210/565 (37%), Positives = 309/565 (54%), Gaps = 40/565 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + Q+NP+VGDI GN K + + + +++F EL I GYPP+DL+F+K FI Sbjct: 1 MKILLCQINPIVGDIEGNTKKIIEIIK--SHKDAKILVFPELSICGYPPKDLLFQKDFID 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + D ++VG P + + NS +IL G I V K LP+Y Sbjct: 59 AIEKAIEKIAKAVEDSF--VIVGSPTKSHHVSKLFNSAIILHQGKIEKVIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R F+ G + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFMPGPTREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELYQKGAKVFIN 176 Query: 174 LNASPYYHNKLKKRH-EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ + +++ P+IYVNQVGG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKDAAKAYGFPVIYVNQVGGNDELIFDGNSMVISSDGRLVGK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E ++ + D S A VL +RDY K Sbjct: 237 AKEFEEDIVEIELEKIDKIPEIEIHEDIS------------WIKKALVLGIRDYFDKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +AV+ALGKENV + +P +Y+S SL+DA A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGKENVLGVAMPSRYSSEHSLKDARKLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V I + + + + + + ENIQ+RIRGNILM +SN ++LTT NKSE+ Sbjct: 345 VYSIEEPFKAYLRMFNGS-EVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSEL 403 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PSA Sbjct: 404 AVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPSA 454 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q DQ++LPPY +LD I+ +E ++S Y + V + ++ +EYKR+ Sbjct: 455 ELRPNQKDQDTLPPYEVLDPILVAYIEEQKSIDEIVSMGYPKDLVIKIIKIVERAEYKRK 514 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QA G K+T+K+FG R PI ++ Sbjct: 515 QAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|117926867|ref|YP_867484.1| NAD+ synthetase [Magnetococcus sp. MC-1] gi|117610623|gb|ABK46078.1| NAD+ synthetase [Magnetococcus sp. MC-1] Length = 577 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 228/576 (39%), Positives = 317/576 (55%), Gaps = 27/576 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +AIAQ+N VG + N A + A R G L+LF EL ++GYPPEDL+ K SF++ Sbjct: 3 FTLAIAQINAHVGALEKNRLAMVSAAKHARRMGAKLVLFPELALTGYPPEDLLHKPSFLR 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSEF 123 L+ + G + G PR++ G + N+ +++ G + K LPNY F Sbjct: 63 RVEQEELELRDALREIGVDAIYGVPRRNAAGTLWNAAALIEQGIESQLCIKQALPNYGVF 122 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G +++I +GI ICEDIW+ L +QGA+ + +LNASPY K Sbjct: 123 DERRYFEPGGETHSFNYQEIPMGINICEDIWQAKGAAAQLARQGAKLIINLNASPYRVGK 182 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM- 242 + R EI+ ++ LP+IYVN VGGQDEL+FDG SF D +L + + FSE+ + Sbjct: 183 WQDREEIIRARVQETGLPVIYVNLVGGQDELVFDGGSFAMDHTGKLVERCRFFSEELRLM 242 Query: 243 -TEWHYDQQLSQWNYMSDDSAS--------------------TMYIPLQEEEADYNACVL 281 +W + D+ + P++ Y A + Sbjct: 243 RVKWDGQNPVVWVPVHGIDNGPVRLVAPMEGGDWRAPRAHGEDVEPPMEPLHEIYTAMKI 302 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 L DYV+KN F V++GLSGG+DSAL AA+AVDALG + V+++M+P +TS +SL DA Sbjct: 303 GLHDYVRKNGFQGVVLGLSGGVDSALTAAVAVDALGADKVESVMMPSAFTSGESLSDAEL 362 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 CA LG K L I L F +++ P + EN+Q RIRG +LMALSN + Sbjct: 363 CAANLGIKLGNLTIGPLFELFKQTLAEEFAGLPEDVTEENLQPRIRGTLLMALSNKKGTL 422 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LLTT NKSE+SVGY TLYGDM+GG++ LKDL KT VF+L WRN G IP Sbjct: 423 LLTTGNKSEMSVGYATLYGDMAGGYSVLKDLLKTTVFELCEWRNEQARKEGKP---LPIP 479 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEH 520 +I++K P+AELR Q D +SLPPY ILD I+ VE EE V Sbjct: 480 QNIIDKPPTAELRHDQKDTDSLPPYDILDTILHHYVELEEGLDEIVAAGIERAEAVRVIA 539 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ +EYKRRQAP G +I ++FG+ R YP++N F+ Sbjct: 540 MVDRNEYKRRQAPPGVRIVDRNFGKARRYPLTNGFK 575 >gi|89070087|ref|ZP_01157417.1| NAD(+) synthase [Oceanicola granulosus HTCC2516] gi|89044308|gb|EAR50451.1| NAD(+) synthase [Oceanicola granulosus HTCC2516] Length = 552 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 231/559 (41%), Positives = 334/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++ ++ IAQ NP VGD+AGN A+AR A E G +++ E+F++GY +DLV K Sbjct: 1 MSERFRLTIAQANPTVGDLAGNAARARAAWEAGRAAGAQMVVLPEMFLAGYQTQDLVQKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ C ++TL D G + +G P + + N IL G + A K +LPNY Sbjct: 61 AFVADCQRHLETLAEACAD-GPALGIGAPVIEGTALYNGYFILCNGRVHAAMRKFHLPNY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E+R + G + P +R+G ICED W ++ + + + GAE L N SPY+ Sbjct: 120 TVFDEERLYEHGSFSGPYEVAGVRIGTPICEDAW-YPDVAETMVESGAEILVVPNGSPYF 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R + ++ +P++Y+N VG QD+ +FDGASF + LA ++ F E Sbjct: 179 REKFDVRLNRMVARVVENDVPLVYLNLVGAQDDQVFDGASFVLNRHGALALRLPAFEEAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ ++ + + E DY+A VLSL DY++K F KV++GLS Sbjct: 239 AHVDF------ARTDAGWRAEPGEIAPLPDSLEQDYHAMVLSLSDYMRKTGFGKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A +A DALG ENV+ +MLP +YTS SLEDA A A LGC+YD +PI + + Sbjct: 293 GGIDSAIVATVAADALGPENVRCVMLPSEYTSETSLEDARAVAANLGCRYDFVPITRVRD 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + EN+QSRIRG +LMA SN MLLTT NKSE++VGY T+YG Sbjct: 353 AVTETLAPLFEGLAEDLTEENVQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF L WRN++ P EVIP +++K PSAELR Q D+ Sbjct: 413 DMAGGYNPIKDLYKTRVFALCRWRNANHRPWMAAPAGEVIPVRVIDKPPSAELRADQKDE 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY +LD I+K +V+ + S + Y ETV+ VE L+Y SEYKR Q+ GT+++ Sbjct: 473 DSLPPYDVLDGILKLLVDEDSSVADCVAAGYERETVKRVEQLIYISEYKRFQSAPGTRLS 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 ++F DR YPI N++RD Sbjct: 533 MRAFWLDRRYPIVNRWRDP 551 >gi|218885553|ref|YP_002434874.1| NAD+ synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756507|gb|ACL07406.1| NAD+ synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 556 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 203/572 (35%), Positives = 309/572 (54%), Gaps = 40/572 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IA+ QLN VVGD+AGN A+ A +A +G L + EL I GYPP DL+ + F+ Sbjct: 1 MNIALLQLNMVVGDVAGNAARIEAAVRDAAARGAGLCVTPELAICGYPPRDLLLRSDFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIV---VGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 C A++ L D +V V P + N+ V+L G + K+ LP Y Sbjct: 61 GCRKALEALAQRLKDAPPVLVGAPVPNPTPVGNRLHNAAVLLHEGTVTVATRKVLLPTYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-----------SNICKHLKKQGAEF 170 F E+R F G + + RLG+ +CEDIW + ++ L G + Sbjct: 121 VFDERRYFEPGVNCGAVTVAGWRLGVTVCEDIWNDKTFWQEHRQYETDPVADLGLAGVDA 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +L+ASP+ K R +++ S +P++Y NQVGG D+L+F G S FD L Sbjct: 181 IINLSASPFTLGKQAVRERMLSRVASRYRVPVLYANQVGGNDDLLFAGKSVAFDAVGHLI 240 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + + F E + + + + S P + E + A V+ RDY +K Sbjct: 241 ARGRPFEEDTVLVDV------------AAGTGSICPDPAEPEAQVWQALVMGTRDYARKC 288 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F ++GLSGG+DSAL AA+A +ALG ENV+ +++P ++S S+ DA A A+ LG Sbjct: 289 GFTGAVLGLSGGVDSALVAAVAAEALGPENVRVLLMPSPHSSEGSVTDALAVARNLGLSA 348 Query: 351 D---VLPIHDLVNHFFSLMSQFLQ---EEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 D +PI ++ F + ++ + ENIQSRIRGN+LMA+SN S A+LLT Sbjct: 349 DAVHTVPIGPMMEGFDAALAPVFGALGRTARDVTEENIQSRIRGNLLMAVSNKSGAVLLT 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY T+YGDM+GG + D+ KT V+++ WRN+ ++IP +I Sbjct: 409 TGNKSELAVGYCTIYGDMAGGLAVIADVPKTLVYRVCRWRNAQAGY-------DLIPTAI 461 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIK-RIVENEESFINNDQEYNDETVRYVEHLLY 523 L+K+PSAELRP Q D +SLPPY +LD I++ +V + + + ++ V V L+ Sbjct: 462 LDKAPSAELRPDQKDTDSLPPYDVLDAILECCVVHHMDRNAVVAEGFDPAVVDNVLRLVR 521 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 SE+KRRQA G K+T ++FG P++++ Sbjct: 522 ISEFKRRQAAPGLKVTDRAFGTGWRMPVASRL 553 >gi|255530325|ref|YP_003090697.1| NAD+ synthetase [Pedobacter heparinus DSM 2366] gi|255343309|gb|ACU02635.1| NAD+ synthetase [Pedobacter heparinus DSM 2366] Length = 546 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 203/563 (36%), Positives = 316/563 (56%), Gaps = 31/563 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +G+ N K E+A QG+DLI+F EL + GYPP D + FI+ Sbjct: 1 MKIALAQLNYHIGNFEYNTHKIIDHIEQAKIQGVDLIVFAELAVCGYPPRDFLEFDEFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 C + + G +VG P ++ + + N+ ++ G + V K LPNY Sbjct: 61 LCEKSAQQIAEHCK--GIACIVGLPVKNDVLAGKDLYNAAYFIEDGRLKRVVKKALLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-------ICKHLKKQGAEFLFS 173 F E R F + I F+ I++ + ICED+W +N L +Q + + + Sbjct: 119 DVFDEYRYFEPASHFECIDFQGIKIAVTICEDLWNINNNPLYIASPMDELIRQKPKLMIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + ++R +++ +LP++YVNQVG Q E+IFDG S FD + L +M Sbjct: 179 IAASPFSYCHDEERVVVLSDNARKYNLPLLYVNQVGAQTEIIFDGGSLAFDAKGNLIDEM 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 +F E + E+ ++ + + + E + A V+ ++DY K+ F Sbjct: 239 PYFKEALRVYEFEDNRIKGY--------VPMQHQAIPDIEQIHQALVMGIKDYFAKSGFS 290 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K ++GLSGGIDSA+ A+A ALG ENV +++P KY+S S++DA K +GC+++V+ Sbjct: 291 KAVLGLSGGIDSAIVCALACRALGPENVMAVLMPSKYSSDHSIQDALDLVKNIGCEHEVI 350 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + + F ++M+ ++ P + ENIQ+R RG ++MA+SN +LL TSNKSE +V Sbjct: 351 PIKEAADAFDNMMAPAFKDLPFNLTEENIQARCRGIVVMAMSNKFGYILLNTSNKSECAV 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM G + D+YKTQV+QLA++ N GI VIP + + K PSAEL Sbjct: 411 GYGTLYGDMCGAIGVIGDVYKTQVYQLANYINKDGI---------VIPENSIVKPPSAEL 461 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP Q D +SLP Y ILD I+ + +E ++S Q Y++ VR + ++ +E+KR Q Sbjct: 462 RPGQKDSDSLPDYDILDKILFQYIEQKQSSSAIIAQGYDEGLVRRIIKMVNTAEFKRYQT 521 Query: 533 PVGTKITAKSFGRDRLYPISNKF 555 P +++ K+FG R PI K+ Sbjct: 522 PPILRVSPKAFGMGRRMPIVGKY 544 >gi|307298266|ref|ZP_07578070.1| NAD+ synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916352|gb|EFN46735.1| NAD+ synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 569 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 209/576 (36%), Positives = 309/576 (53%), Gaps = 34/576 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+AQ+N VGDI GN K A ++A +++LF EL I+GYPPEDL+ F++ Sbjct: 3 VRTALAQINTTVGDINGNKNKIIEAIDQATASDSEILLFPELTITGYPPEDLLLNTGFLR 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ + + T IV+GF E + N+ ++ +G I AV K++LPNYS F Sbjct: 63 ENLAALKEIANYTEGSKTMIVLGFVDFSNE-IYNAAAVIHSGEIRAVYRKMSLPNYSVFD 121 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G + + +GI ICED+W S GA + +L+ASP+ K Sbjct: 122 ERRYFSPGSHPLLARYGEANIGINICEDLWVPSGPINEQAIGGANLILNLSASPFSGMKS 181 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 K R ++ + I+YVN VGGQD+L+FDG S +L K F E + + Sbjct: 182 KTRSALLLTRAMEYSSIIVYVNLVGGQDDLVFDGRSCVAMPDGRLLL-GKAFEEDMILLD 240 Query: 245 WHYDQQLSQ------------------------WNYMSDDSASTMYIPLQEEEADYNACV 280 D + + L + + A Sbjct: 241 IDTDVSTRYNLFEGKRKDYSMQVSLEEVSITPSHRQSPSVNPDSSCQELCKYDELIAALE 300 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 + +RDYV+KN F KV++GLSGG+DS+L AA+AV A+G +NV+ +M+P + TS +S DA Sbjct: 301 IGIRDYVKKNGFKKVVLGLSGGMDSSLVAALAVRAIGNDNVKGVMMPSRITSGESKRDAL 360 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 L + +PI D++ S + I EN+Q+RIRG ILMALSN Sbjct: 361 ELVNNLQIEGLEIPIDDIMCTTLSTLEPVFTGTSEDITEENLQARIRGMILMALSNKFGW 420 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++L T NKSE++ GY TLYGDM+GGF LKDLYKTQV+++A N ++I Sbjct: 421 LVLITGNKSEMATGYATLYGDMAGGFAVLKDLYKTQVYRIAERINELAKR-------DMI 473 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETVRYVE 519 P ++ K+PSAELR Q DQ+SLPPY ILD+I++ +E +S + + +TV + Sbjct: 474 PRNVFSKAPSAELREGQKDQDSLPPYEILDEILRLHIEEGQSAEEIVLEGFERDTVEHSL 533 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 LL SEYKR+Q P G K++ ++FG+D PI+N + Sbjct: 534 KLLRRSEYKRKQCPPGIKVSKRAFGKDWRMPITNHY 569 >gi|304319845|ref|YP_003853488.1| NAD(+) synthase [Parvularcula bermudensis HTCC2503] gi|303298748|gb|ADM08347.1| NAD(+) synthase [Parvularcula bermudensis HTCC2503] Length = 555 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 241/561 (42%), Positives = 335/561 (59%), Gaps = 16/561 (2%) Query: 1 MLK-KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M +L IA+A LNP VGD+AGNI + + A +EA DL++ +EL +SGYPPEDLV Sbjct: 1 MTTGRLSIALAVLNPTVGDVAGNIERIKAAHKEATD--CDLVVCSELCVSGYPPEDLVLH 58 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQE---GVLNSVVILDAGNIIAVRDKIN 116 + C A+D L T D G +VVG P + N+ V+L G + V K Sbjct: 59 APYAIRCREAVDALAQVTAD-GPALVVGTPWPAEGRQRKPYNASVLLADGKVQTVAYKRY 117 Query: 117 LPNYSEFHEKRTFISGYSNDPI-VFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 LP Y F E RTF + + + + +RLG++ CED+W L ++GAE + + Sbjct: 118 LPEYGVFDEPRTFSASTAIPDLGIVAGVRLGLMTCEDMW-YPTPAADLAERGAEIFVAPH 176 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKH 235 SP+ +R ++ P+++ NQVGGQDEL+FDG +F D + + ++ Sbjct: 177 GSPFRLTAHAERLFHAKARVRETGRPLVFTNQVGGQDELVFDGGAFAVDRDEGV-YRGPL 235 Query: 236 FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKV 295 F+ T W D + ++ ++ + P++E Y A V RDYV+K+ F V Sbjct: 236 FARGITRTVWRRD----EAGHLRFETGPSEDWPVEEPLI-YPALVTGTRDYVRKSGFSSV 290 Query: 296 IIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 ++GLSGGIDSA+ AAIAVDALG +NV+ +MLP +YTS +SL+DAAACAKALG D + I Sbjct: 291 VLGLSGGIDSAMVAAIAVDALGPDNVRCVMLPSRYTSTESLDDAAACAKALGVTLDRVEI 350 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 ++ F ++ + + EN+QSRIRG LMALSN +LL+T NKSE++ GY Sbjct: 351 EPMIAVFTDSLAPLFAGRSADVTEENLQSRIRGTALMALSNKFGCLLLSTGNKSEMATGY 410 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 TLYGDM+G +NPLKD+YK+ VF+LA WRN++ + GLGP EVIP I+ K PSAELR Sbjct: 411 ATLYGDMNGAYNPLKDVYKSVVFRLARWRNANHPSGGLGPRGEVIPERIITKPPSAELRA 470 Query: 476 HQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPV 534 Q D +SLP Y ILDDI+ +VE + S ++ V V LL SEYKRRQAP Sbjct: 471 DQRDDQSLPAYDILDDILSGLVEEDLSPKAVAARGHDPALVTKVRRLLLLSEYKRRQAPP 530 Query: 535 GTKITAKSFGRDRLYPISNKF 555 G KIT ++FGRDR YP+ N++ Sbjct: 531 GPKITVRNFGRDRRYPLLNRW 551 >gi|118602530|ref|YP_903745.1| NAD+ synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567469|gb|ABL02274.1| NAD+ synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 626 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 228/557 (40%), Positives = 332/557 (59%), Gaps = 28/557 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 K +KI IAQ+NP+VGD+ GN K + +EA+ +G DL++F EL + GYPPEDL+ ++ Sbjct: 95 SKSIKIDIAQINPIVGDLDGNTQKIIKLTKEAHIRGCDLLVFPELSLIGYPPEDLLLREE 154 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FIQ + TL S T I+ G P + + + N ++ + V K NLPNY Sbjct: 155 FIQQVQDKV-TLISQTISEDISIIFGAPSKKNDVLYNGAYLVQNSKLW-VYHKQNLPNYG 212 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F G+ + R+G++ICED W I QGA+ + S+NASP+ Sbjct: 213 VFDEKRYFEPGHKAFIFECQGKRIGLVICEDAWTPKIISTT-ANQGAQIIISINASPFQV 271 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R E + ++ IYVN VG QDEL+FDGASF + + Q+ F E+ Sbjct: 272 GKHSQRIEQIKQRVLTTKTNFIYVNMVGAQDELVFDGASFVMNSNADITLQLPLFKEKIQ 331 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN-FHKVIIGLS 300 + S +T+ E+ YNA VL+ +DY++KN F+ V++GLS Sbjct: 332 SVSF--------------TSPTTLPDTDPIEKTIYNALVLATKDYIEKNGVFNGVVMGLS 377 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G N++ IM+ Y+YTS SLEDA A A+ Y + IH +V+ Sbjct: 378 GGIDSALTLAIAADAIGTRNIKAIMMFYEYTSSMSLEDAKIQATAMNIDYHEISIHTIVD 437 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+RIRG +LMA+SN ++LTTSNKSE++VGY TLYG Sbjct: 438 SFNTQLNILFNGMKADTTEENLQARIRGTLLMAISNKLGKIVLTTSNKSEMAVGYATLYG 497 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DMSGGF PLKD+ KT V+QLA +RN+ L+ +IP +++++PSAEL P+Q DQ Sbjct: 498 DMSGGFAPLKDVSKTLVYQLAKYRNT---------LSTIIPKRVIDRAPSAELTPNQIDQ 548 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY LD I++ +E S Q +N++TV+ + ++ +EYKRRQ+ G KI+ Sbjct: 549 DSLPPYDELDAILELFIEQRYSVERIIKQGFNEQTVKRIIQMVLNNEYKRRQSAPGPKIS 608 Query: 540 AKSFGRDRLYPISNKFR 556 +FG++R YPI++KF+ Sbjct: 609 QNAFGKERRYPITSKFQ 625 >gi|86608724|ref|YP_477486.1| NAD+ synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557266|gb|ABD02223.1| NAD+ synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 558 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 221/565 (39%), Positives = 308/565 (54%), Gaps = 27/565 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ QLN +VGD++GN + R A E G +L + +EL + GYPP DL+ + ++ Sbjct: 1 MKVALLQLNYIVGDLSGNAERIRSAVEAVAAAGAELAITSELALLGYPPRDLLLYPALVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S + L S +VVG P + + N+ L+ G I K LP Y Sbjct: 61 RASQVLQHLASRL-QASIPVVVGSVQPNPLPEGRPLYNAAAWLEGGQIRHWFQKSLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEF 170 F E R F G PI +R RLG ICEDIW + + + + + GA+ Sbjct: 120 DVFDEDRYFEPGSQPQPIEYRGRRLGFTICEDIWNDRDFWQHRRYHWDPVEQMARCGADL 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +L+ASP+ K K R E++ LPI+YVNQVGG D+LIFDGAS D + ++ Sbjct: 180 LINLSASPFSLGKQKLRVEMLGSLARKHALPILYVNQVGGNDDLIFDGASCAVDRRGRVV 239 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 Q F + D+ N + P + E Y A VL RDYV K Sbjct: 240 AQAAAFQPDQLI--LDVDELTQSPNPDQSPPTAGSRWPTEPEAELYEALVLGTRDYVSKC 297 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++GLSGGIDSA+ A IA DALG E V +++P Y+SP SL DA A+ LG Sbjct: 298 GFREVLLGLSGGIDSAVTAVIAADALGPERVLGVLMPSPYSSPGSLTDAYQLAQNLGIPT 357 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 LPI ++ + L+++ P I EN+QSRIRG +LMALSN +LLTT NKSE Sbjct: 358 LKLPIQSIMESYHQLLAEPFAGLPPDITEENLQSRIRGTLLMALSNKFGRLLLTTGNKSE 417 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY T+YGDMSGG + D+ KT V++LA W N E IP + L K PS Sbjct: 418 LAVGYCTIYGDMSGGLAVISDVPKTWVYRLARWINRQQ---------ERIPLATLTKPPS 468 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELRP Q D +SLPPY +LD I++R +E +S Q ++ +TV++V L+ +E+KR Sbjct: 469 AELRPGQQDSDSLPPYDLLDRILQRHIEQHQSGPELVAQGFDPDTVQHVLRLVQNAEFKR 528 Query: 530 RQAPVGTKITAKSFGRDRLYPISNK 554 QAP G +IT ++FG PI+ + Sbjct: 529 HQAPPGLRITDRAFGTGWRMPIAKR 553 >gi|312128589|ref|YP_003993463.1| nad+ synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311778608|gb|ADQ08094.1| NAD+ synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 540 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 206/565 (36%), Positives = 318/565 (56%), Gaps = 40/565 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K + + + +++F EL I GYPP+DL+F+K FI+ Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIEIIK--SHRDAKILIFPELAICGYPPKDLLFQKDFIE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + + D ++VG P + + NS +IL G I + K LP+Y Sbjct: 59 AVDKAIEKIAKEVEDS--YVIVGSPTKSHHVSKLFNSAIILYQGKIEKIIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R F + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFTPSPTREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELCQKGAKVFIN 176 Query: 174 LNASPYYHNKLKKRH-EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ + +++ + +P+IYVNQVGG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVLSSDGRLVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F + + + + D + I ++ A VL +RDY +K Sbjct: 237 AKEFE-----------EDILEIELENIDKIPEIKI-QEDISWIKKALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +AV+ALG+ENV + +P +Y+S S++DA + A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGRENVLGVSMPSRYSSEHSIKDAKSLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + PI D+ + + + + + ENIQ+RIRGNILM +SN ++LTT NKSE+ Sbjct: 345 IYPIEDVFRAYLRMFNTS-ETPLQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSEL 403 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PSA Sbjct: 404 AVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPSA 454 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q DQ++LPPY +LD I+ +E ++S + Y E V V ++ +EYKR+ Sbjct: 455 ELRPNQKDQDTLPPYEVLDPILVAYIEEQKSINEIVEMGYPKELVLKVIKMVERAEYKRK 514 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QA G K+T+K+FG R PI ++ Sbjct: 515 QAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|226940195|ref|YP_002795268.1| NadE [Laribacter hongkongensis HLHK9] gi|226715121|gb|ACO74259.1| NadE [Laribacter hongkongensis HLHK9] Length = 739 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 212/533 (39%), Positives = 298/533 (55%), Gaps = 23/533 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ NP+VGDIAGN + R EA G D++L EL ++GY PEDL+ + +F Sbjct: 1 MRLALAQFNPIVGDIAGNANEIARLAREAMAAGADVLLTPELALTGYSPEDLLLRPAFYA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +D L G +++G P N+ ++ GNI+ K+ LPN F Sbjct: 61 EVNRQLDRLMEI---DGITLIIGHPAMLGSERFNAATVMRDGNILGTYHKMRLPNEEVFD 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G + + +G+L+CEDIW + L GA+ L +NASP++ K Sbjct: 118 EVRYFTPGVAPLVFGQDGVNIGVLVCEDIWGPEPAAEAL-DAGADVLLVMNASPFHREKH 176 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R + ++ LP+ YVN VGGQDEL+FDGASF + + ++ HF + Sbjct: 177 AVREQECRWRVEETGLPVAYVNLVGGQDELVFDGASFALNRAGEPVCRLPHFEAALGFLD 236 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 D + M EA Y A VL +RDY+ KN F V++GLSGGID Sbjct: 237 VQ----------DGDIRPAVMAPLPDPVEAVYRALVLGVRDYIGKNGFPGVLLGLSGGID 286 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG + V +M+P +YT+ S++D+ + LG +YD + I + F Sbjct: 287 SALTLAIAVDALGADRVHAVMMPSRYTADISVDDSRDMVERLGVRYDEVAIWPMYESFMQ 346 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + EN+QSRIRG ILMALSN + ++LTT NKSE++ GY TLYGDM+G Sbjct: 347 ALTPLFAGAAADTTEENLQSRIRGVILMALSNKTGKLVLTTGNKSEMTTGYATLYGDMAG 406 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V++L+ WRN G +EVIP I++++PSAELRP Q DQ+SLP Sbjct: 407 GFAVLKDVAKTLVYELSEWRNRQG--------SEVIPRRIIDRAPSAELRPDQVDQDSLP 458 Query: 485 PYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGT 536 PY +LD I+ VE S + Y+ V + LL +EYKRRQAPVG Sbjct: 459 PYDVLDAIMAEYVEMNRSAADIVALGYDTADVERITRLLKVNEYKRRQAPVGP 511 >gi|33596092|ref|NP_883735.1| NAD synthetase [Bordetella parapertussis 12822] gi|33573095|emb|CAE36737.1| putative NAD synthetase [Bordetella parapertussis] Length = 544 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 227/560 (40%), Positives = 326/560 (58%), Gaps = 18/560 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ IAQ+N VGD+AGN A+ +A +A QG D+++ EL ++GYPPEDL+ + Sbjct: 1 MSLARVGIAQINACVGDLAGNAARVLQAARQAAGQGADVLVTPELVLTGYPPEDLLLRPR 60 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 FIQ + + L D G +V+G Q+ + N+ ++ G ++ K LPNY Sbjct: 61 FIQEQQAVFERLCQDLAGLAGLHVVIGHVLARQDRLYNAATVVCEGRVLGSYCKRELPNY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 S F E+R F + + +R G+ ICEDIW A+ L NASPY Sbjct: 121 SVFDEQRYFSAHGEAFGFTVKGVRFGLNICEDIWLERAPRAAAADG-AQVLLVSNASPYN 179 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K ++R + + +IY N VGGQDEL+FDGASF D Q +++ ++ F+E Sbjct: 180 TGKQEERLSVARRSVQDTGCALIYANLVGGQDELVFDGASFALDAQGRMSARLPDFTEGV 239 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E + + P EE +NA VL +RDY+ KN F IIGLS Sbjct: 240 NVLEVD------ARGTVRPVTEQAAVQPYGLEEQVWNALVLGVRDYLGKNGFPGAIIGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A+AVDA+G +NV+ +M+P +YT+ SL DAA A+ LG +YDV+ I ++V+ Sbjct: 294 GGIDSAVVLAVAVDAVGADNVRAVMMPSRYTADISLTDAADMARRLGVQYDVIAIGEVVD 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ P ENIQ+R RG +LMALSN + ++LTT NKSE++ GY TLYG Sbjct: 354 RFEAALAPQFAGLPVDATEENIQARARGTLLMALSNKTGRLVLTTGNKSEMTTGYCTLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF +KD+ KT V++LA+WRN +IP I+ + PSAELRP QTDQ Sbjct: 414 DMAGGFAVIKDVPKTLVYRLANWRNQRQP---------IIPERIITRPPSAELRPDQTDQ 464 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD II+R +E+ S + + E V V L+ +EYKRRQAP G +IT Sbjct: 465 DSLPPYDILDGIIERYMEHNASAADIVAAGFPREAVGQVVRLIRINEYKRRQAPPGPRIT 524 Query: 540 AKSFGRDRLYPISNKFRDHI 559 ++FGRD YP++N FR+ + Sbjct: 525 PRAFGRDWRYPVTNGFRETV 544 >gi|289662938|ref|ZP_06484519.1| NAD synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 538 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 218/552 (39%), Positives = 307/552 (55%), Gaps = 20/552 (3%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFIQACS 67 +AQ + VG +A N + A + D++LF EL ISGYPPEDL+ + F+ C Sbjct: 1 MAQFDFPVGAVAQNTDRIIEYIAAARDEFEADIVLFPELAISGYPPEDLLLRPGFLAHCE 60 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 A+ + + T G VVG+P+ V N+ +L G I A K LPNY+ F E+R Sbjct: 61 EALGRIAAATR--GIVAVVGWPQSAGSVVYNAASVLRDGRIEATYRKRELPNYAVFDERR 118 Query: 128 TFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 F N + +++G++ICED+W + + K AE + NASPY K Sbjct: 119 YFDVDPDGDNCVFTVKGVQVGVVICEDLW-FAEPLANTVKARAELVLVPNASPYERGKHA 177 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW 245 +R ++ + I Y+N VGGQD L+FDGAS DG + F +Q + ++ Sbjct: 178 QRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVDQWLVVDY 237 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++ DD +M + A V L+DY +KN F KV +GLSGGIDS Sbjct: 238 AAGERSFTPVVWVDDGDESMD------ALAWRAVVRGLQDYCRKNGFSKVWLGLSGGIDS 291 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 AL AIAVDALG +NV + LP +YT+ S + A +ALG K + + I Sbjct: 292 ALVLAIAVDALGGDNVTAVRLPSRYTANLSNDLADEQCRALGVKLETIAIEPAFEGLLGA 351 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + I EN+QSR RG ILMALSN ++LTT NKSE +VGY T+YGDM GG Sbjct: 352 LGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLVLTTGNKSEYAVGYATIYGDMCGG 411 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 + PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +QTDQ+SLPP Sbjct: 412 YAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRDNQTDQDSLPP 464 Query: 486 YPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 Y +LD I+ R V+ E+S + Y +TV +V L+ +E+KR Q+ G K++ ++FG Sbjct: 465 YDVLDGILYRYVDQEQSRDDIVAAGYAADTVEHVLRLVRLNEWKRHQSAPGPKVSRRAFG 524 Query: 545 RDRLYPISNKFR 556 R+R YPI+N +R Sbjct: 525 RERRYPITNGYR 536 >gi|117928126|ref|YP_872677.1| NH(3)-dependent NAD(+) synthetase [Acidothermus cellulolyticus 11B] gi|117648589|gb|ABK52691.1| NH(3)-dependent NAD(+) synthetase [Acidothermus cellulolyticus 11B] Length = 591 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 221/592 (37%), Positives = 317/592 (53%), Gaps = 45/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ++PVVGDIAGN+ + A + L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALAQVDPVVGDIAGNLELVVAWTKHAASRSAHLVAFPEMMLTGYPVEDLALRPS 60 Query: 62 FIQACSSAIDTLKSDTHDGG---AGIVVGF--------PRQDQEGVLN-SVVILDAGNII 109 F+ A A+ L G G++VG+ PR G+ S L G ++ Sbjct: 61 FVAASRRAVVELAERLAREGLGNIGVIVGYLDAAPDDRPRPGGRGLPTDSAAFLIGGRVV 120 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 A DK +LPNY F E R F G + + + + ICED+W++ G Sbjct: 121 ARYDKHHLPNYGVFDEYRYFSRGERLVVVRHLGVDIAMTICEDLWQDGGPLTAAWAAGVG 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + ++N SPY K R + + + V PI YVN VGGQDEL+FDG SF D Sbjct: 181 LVVTINGSPYERGKPDARLRLAQRRAAEVRAPIAYVNMVGGQDELVFDGDSFVVDADGTP 240 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSD-----------------------DSASTMY 266 + F E + + S+ D + + + Sbjct: 241 LVRAPQFDEGLAVIDLSLQPGTSRRRGSVDVRDGSRMTIERVDLKTPSLPDYPPAPTGLA 300 Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 L E Y A V RDY++KN F V++GLSGGIDSAL IAVDA+G E V T+ + Sbjct: 301 ARLAPEAEVYAALVTGTRDYIRKNRFRSVLVGLSGGIDSALVTTIAVDAIGAEAVHTVAM 360 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +++S SL DA A+ G ++ V+PI D+V+ F + + G+ AEN+Q+R+ Sbjct: 361 PSRWSSDHSLADAEELARRQGTRHTVIPITDMVDAFERHL------DLHGLAAENLQARV 414 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG ILM+LSN ++LTT NKSE++ GY TLYGD +GGF PLKD+ KT V++LA WRN+ Sbjct: 415 RGTILMSLSNEHGHLVLTTGNKSELATGYSTLYGDSAGGFAPLKDVPKTLVWELARWRNA 474 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 SG P IP ++K PSAELRP Q D +SLPPYP LD +++ VE++ S + Sbjct: 475 QAERSGAVP---PIPQRCIDKPPSAELRPGQLDTDSLPPYPELDAVLRLYVEHDASRDDI 531 Query: 507 -DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ V V L+ +EYKRRQ P G KIT ++FGRDR PI+N++ + Sbjct: 532 VAAGHDPFLVDRVIRLVDNAEYKRRQYPPGPKITTRNFGRDRRLPITNRWVE 583 >gi|256788144|ref|ZP_05526575.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces lividans TK24] Length = 589 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 208/596 (34%), Positives = 306/596 (51%), Gaps = 49/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGDI GN + +G L+ F E+ ++GYP EDL + S Sbjct: 1 MPRLRLALNQIDSTVGDIDGNAESVLHWTRHSAERGAHLVAFPEMTLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A +A+ +L + D G G ++VG + N+ +L G + Sbjct: 61 FVEASRAALRSLAARLADEGLGTVPVIVGHLDRSATAQPRYGQPAGAPQNAAAVLYGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + R + + + ICED+W++ + A Sbjct: 121 ALSFAKHHLPNYGVFDEFRYFVPGDTLPVVRVRGVDVALAICEDLWQDGGRVPAARSARA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ GGQDEL+FDG S D Sbjct: 181 GLLLSVNASPYERDKDDTRLELVRRRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGT 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY---------------------- 266 + + F+E + + + D + Sbjct: 241 VLARAPQFTEGCMVLDLDLPAADADPPTGVVDDGLRIDRVVLPGEAGREQPLPAGEPWLS 300 Query: 267 ----IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ 322 PL ++E Y+A V LR YV KN F V+IGLSGGIDSAL A+IA DALG E+V Sbjct: 301 GGHAEPLDDDEEVYSALVTGLRAYVAKNGFRSVLIGLSGGIDSALVASIACDALGAEHVY 360 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI 382 + +P KY+S S +DAA A+ G Y + I + + + + E +G+ EN+ Sbjct: 361 GVSMPSKYSSGHSRDDAAELARRTGLHYRTVSIEPMFDAYTGAL------ELTGLAEENL 414 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 QSR+RG +LMALSN ++L NKSE++VGY TLYGD GG+ P+KD+YKT VF+LA Sbjct: 415 QSRLRGTLLMALSNQEGHLVLAPGNKSELAVGYSTLYGDSVGGYGPIKDVYKTSVFRLAE 474 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES 502 WRN G P +P + + K PSAELRP Q D +SLP YP+LD I+ V+ + Sbjct: 475 WRNRAARDRGRTP---PVPENSITKPPSAELRPGQVDTDSLPDYPVLDAILALYVDRDRG 531 Query: 503 FINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 Y+ E V ++ +EYKRRQ P GTKI+ K FG+DR P++N++R+ Sbjct: 532 ADEIVAAGYDRELVTRTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPVTNRWRE 587 >gi|56460294|ref|YP_155575.1| NAD synthetase [Idiomarina loihiensis L2TR] gi|56179304|gb|AAV82026.1| NAD synthase [Idiomarina loihiensis L2TR] Length = 543 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 218/562 (38%), Positives = 323/562 (57%), Gaps = 22/562 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL + +AQL+ VG I N A + E Q D+I+F EL I+GYPPEDL+F+ Sbjct: 1 MAKLSLCLAQLDFTVGAIHNNTALILKTLREQGEQH-DIIVFPELAITGYPPEDLLFRDD 59 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 QA +A++ + + D ++VG P+ + N++ +L G + K LPNY Sbjct: 60 LHQAVDNAVEQISAAASD--CVVIVGHPQAVGGELFNAMSVLHRGECLHRYFKQRLPNYG 117 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E+R FI G+ + ++ +R+G+ ICED+W + + L L S+NASPY Sbjct: 118 VFDEQRYFIPGHQSQVFEWQGVRIGLQICEDLWHPQPLQQLLDDDIDLVL-SINASPYEL 176 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 NK ++R ++ +++ PI+Y+N G QDEL+FDG S D + +L ++ H Sbjct: 177 NKHEQRLGVLKQRVAEAGKPILYLNNCGAQDELVFDGHSLVLDAEGELVAELPHCEMTTA 236 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + D+ + + + Y+A VL++RDYV KN F V++GLSG Sbjct: 237 SVTYE-DKGIRCVGFEP-------KAEQNDLAHVYDALVLAVRDYVTKNGFSGVVLGLSG 288 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL AIA DALG + V +M+P++YTS SLEDA A LG +YDV+PI + N Sbjct: 289 GIDSALTLAIASDALGADKVHAVMMPFRYTSDMSLEDAEKQADTLGVRYDVVPIEPMFNE 348 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + E + EN+QSR RG +LMALSN + +++L T NKSE++VGY TLYGD Sbjct: 349 FMTQLGPLFGETETDTTEENLQSRCRGVLLMALSNKTGSLVLATGNKSEMAVGYATLYGD 408 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M GGF P+KD+ K V+QLA +RN+ G IP ++++ PSAEL P Q D + Sbjct: 409 MCGGFAPIKDIPKLLVYQLAEFRNTRGAC---------IPQRVIDRPPSAELAPDQVDSD 459 Query: 482 SLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLP Y LD I+ VE + S + + +E VR V L+ +EYKRRQ+ VG K+T Sbjct: 460 SLPDYSDLDRILALYVERDWSVTDIIAAGFVEEDVRRVVRLVDLNEYKRRQSAVGPKVTP 519 Query: 541 KSFGRDRLYPISNKFRDHISEE 562 ++FG+DR YPI++ +R + + Sbjct: 520 RNFGKDRRYPITSHYRHELQRQ 541 >gi|74316825|ref|YP_314565.1| NH(3)-dependent NAD(+) synthetase [Thiobacillus denitrificans ATCC 25259] gi|74056320|gb|AAZ96760.1| NAD+ synthase (glutamine-hydrolyzing) [Thiobacillus denitrificans ATCC 25259] Length = 537 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 231/553 (41%), Positives = 324/553 (58%), Gaps = 23/553 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQ N VGDIAGN AK A + A+ G L+L E+ I GYP EDLV ++ F Sbjct: 1 MKLALAQFNFTVGDIAGNAAKLLDAAQAAHAAGAALLLTPEMSICGYPAEDLVCRRDFTA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC++A+++L ++VG+P + GV N+ +L G I V K +LPN+S F Sbjct: 61 ACAAAVESLARQAPAE-LALIVGYPERTAAGVYNAAALLRGGRIEQVYRKHHLPNHSVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G IR GI IC DIW+ + GA++L LNASPY+ +K Sbjct: 120 EQRVFCRGDDACVFECAGIRFGINICGDIWEP-GPATGAMEAGADWLLVLNASPYHLSKE 178 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + R + + LP++Y N VGGQDEL+FDGASF FD ++A Q + E F E Sbjct: 179 RDRIAVARARQIETRLPMVYANLVGGQDELVFDGASFVFDADGEVAVQCPAWREGLFYLE 238 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 D + + + A+ Y A VL++RDYV KN F V +GLSGGID Sbjct: 239 LDADGCSGPRHELPGEEAAV-----------YEALVLAVRDYVGKNGFRGVHLGLSGGID 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIA DA+G E V +M+P YT+ S+ED+ + LG +Y + I +V F Sbjct: 288 SALTLAIAADAVGAERVHAVMMPSDYTAGISVEDSREIVERLGVRYAEIAIGPIVEAFTG 347 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ S EN+Q+R RG +LMALSN ++LTT NKSE+ GY TLYGDM+G Sbjct: 348 QLAGEFAGLASDTTEENLQARARGTLLMALSNKFGTLVLTTGNKSEMGTGYATLYGDMAG 407 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT+V++LA++RNS ++ VIP I+++ PSAELRP QTDQ+SLP Sbjct: 408 GFAVLKDVAKTRVYRLANYRNS---------VSPVIPQRIIDRPPSAELRPDQTDQDSLP 458 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD I+ VE + Q ++ V+ V ++ +EYKRRQ+P G +IT ++F Sbjct: 459 PYEVLDAILAAYVERDLPAREIVAQGHDAAVVKKVIRMVDLAEYKRRQSPPGPRITPRNF 518 Query: 544 GRDRLYPISNKFR 556 G+DR YPI++K+R Sbjct: 519 GKDRRYPITSKYR 531 >gi|261856576|ref|YP_003263859.1| NAD+ synthetase [Halothiobacillus neapolitanus c2] gi|261837045|gb|ACX96812.1| NAD+ synthetase [Halothiobacillus neapolitanus c2] Length = 561 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 222/563 (39%), Positives = 321/563 (57%), Gaps = 29/563 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 ++IA+AQ++ VG+ N + A ++ +++F EL ++GYPPEDL+ + F+ Sbjct: 12 VRIALAQVSTQVGNCIANADRVIETIARARQELQARVVVFPELTLTGYPPEDLLLRHDFL 71 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQE----------GVLNSVVILDAGNIIAVRD 113 C + I+ + + HD +++G PR+ + N+ +++D G I+A Sbjct: 72 AQCDAQIERIAAAAHD--MAVIIGAPRRMNGDTHQPGDAPAALENAAIVIDRGQIVAHYA 129 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 K LPNY F EKR F G + + LGI ICEDIW++ + A+ + + Sbjct: 130 KRALPNYGVFDEKRYFKKGREACVVEIDGVPLGITICEDIWESRPAEEAAAAG-AKVILT 188 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 LNASPY+ +K +R +V+ ++ PIIYVN VGGQDEL+FDG SF D Q+ ++ Sbjct: 189 LNASPYHRHKTDERARVVSQRVRETGCPIIYVNLVGGQDELVFDGRSFVAD-HSQIVSKL 247 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F E + D +++ + + P EEE Y+A +RDYV+KN FH Sbjct: 248 PAFKESLGWVDVFPDGRITAHG-------ESHHWPHGEEEV-YSALTAGIRDYVRKNGFH 299 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +++GLSGGIDSAL +AVDALG ENV + +P +YTSP SL DAA +G + L Sbjct: 300 GIVLGLSGGIDSALVLTLAVDALGAENVLAVRMPSRYTSPMSLTDAAEQCAHMGVAMETL 359 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I + N S +S EN+Q+R RG +LMALSN MLLTT NKSE++V Sbjct: 360 SIEPVFNELKSSLSPLFAGLAEDATEENLQARTRGVLLMALSNKFGRMLLTTGNKSELAV 419 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGDM+GGF P+KD+ K V+ LA WRN+H IP ++E+ PSAEL Sbjct: 420 GYATLYGDMAGGFAPIKDVPKMLVYALARWRNTHKTG-----EHPPIPTRVIEREPSAEL 474 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 R Q D +SLPPY +LD II VE ++S + ++ VR + L+ +EYKRRQA Sbjct: 475 RADQRDADSLPPYELLDRIITAFVEEDQSIEDMVAAGLDEAIVRRITRLILLNEYKRRQA 534 Query: 533 PVGTKITAKSFGRDRLYPISNKF 555 P G +I+ ++FGRDR YPI++ F Sbjct: 535 PPGIRISRRAFGRDRRYPITSGF 557 >gi|113475647|ref|YP_721708.1| NAD synthetase [Trichodesmium erythraeum IMS101] gi|110166695|gb|ABG51235.1| NH(3)-dependent NAD(+) synthetase [Trichodesmium erythraeum IMS101] Length = 584 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 226/587 (38%), Positives = 327/587 (55%), Gaps = 42/587 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNPV+GDI+GN A ++A + L++ EL + GYPP DL+ S I+ Sbjct: 1 MKIAIAQLNPVIGDISGNAKLILDAAQKAKKLDAKLMITPELSLIGYPPRDLLIYPSLIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG-------FPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A ++ L ++VG ++ + NS V+L G I V K L Sbjct: 61 AAVLELENLAKYLPSE-IAVLVGTVTFNYQAANTGEKSLFNSAVLLTNGEIKQVFHKQLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDI--------RLGILICEDIWKNS----------NI 159 P Y F E R F G + D + ++G+ ICED+W + + Sbjct: 120 PTYDVFDEDRYFEPGKTRDFFTLENYSNSSENLAKVGVTICEDLWNDEAFWGKRNYAYDP 179 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 K L Q +F+ +++ASPY K K R ++ + +PIIYVNQVGG D+LIFDG Sbjct: 180 MKELAAQKVDFVINMSASPYQTGKQKLREAMLKHSTNCYQIPIIYVNQVGGNDDLIFDGC 239 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 S F+G + ++ + F + E+ ++ +++S D S + +P E+E ++A Sbjct: 240 SVVFNGAGNVVYRAQAFETSLAVVEF----NSAKKDFISVDFKS-INLPESEDEEIWSAL 294 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL LRDYVQK F KV++GLSGGIDSAL AAIA ALGKENV I++P Y+S S++DA Sbjct: 295 VLGLRDYVQKCGFSKVVLGLSGGIDSALVAAIATAALGKENVFAILMPSPYSSEHSVKDA 354 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A+ LG ++ I +L+ + + +S GI ENIQSRIRGN+LMA+SN Sbjct: 355 LELAENLGIAKQIISIENLMKDYDNSLSSLFTGTNFGIAEENIQSRIRGNLLMAISNKFG 414 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG------- 452 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+V+ L W N + + Sbjct: 415 YLLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVYSLCQWLNEQTVNNNKKFSGSQ 474 Query: 453 ---LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQ 508 + +IP +IL K+PSAEL+ Q D++SLP Y +LDDI+ R+VE ES Sbjct: 475 NLLMTEKQNIIPKNILTKAPSAELKEGQKDEDSLPAYEVLDDILFRLVEKCESLDKIIAA 534 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ E V V L+ +E+KRRQAP G KI+ ++FG PI+ K Sbjct: 535 GHDLEVVNKVVKLVMRAEFKRRQAPPGLKISTRAFGTGWRMPIAKKL 581 >gi|183601391|ref|ZP_02962761.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219683448|ref|YP_002469831.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|241191109|ref|YP_002968503.1| putative amidohydrolase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196515|ref|YP_002970070.1| putative amidohydrolase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218997|gb|EDT89638.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|219621098|gb|ACL29255.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|240249501|gb|ACS46441.1| Putative amidohydrolase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251069|gb|ACS48008.1| Putative amidohydrolase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178853|gb|ADC86099.1| Glutamine-dependent NAD(+) synthetase [Bifidobacterium animalis subsp. lactis BB-12] gi|295794098|gb|ADG33633.1| Putative amidohydrolase [Bifidobacterium animalis subsp. lactis V9] Length = 566 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 216/580 (37%), Positives = 318/580 (54%), Gaps = 38/580 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL+ A+AQ++ VG + GN K A +++F E+ ++GYP EDL +++ Sbjct: 1 MTKLRFALAQIDTCVGALKGNADKVLEYASRAASNNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKIN 116 F QA + L D G G +VVG + + N +V+L G + A DK Sbjct: 61 FRQAAWDTANDLAQRLADDGLGSLYVVVGTVGTEHSTQKPYNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F SG + + +RLG ICEDIW+ ++ + L ++N Sbjct: 121 LPNYGVFDEFRIFASGDRSVTMDIDGVRLGFAICEDIWQEGGPVADFAERNIDVLVTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V P+IYVNQVGGQD+L+FDG +F D L + F Sbjct: 181 SPYEEGKTDTRLQLCRRRAAEVGAPVIYVNQVGGQDDLVFDGGTFVVDADGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + + + + + Y ACVL L+DY+ KN F+ V Sbjct: 241 VEDLSYIDID--------SAAATQKPADIAPEMDPDGEVYTACVLGLKDYMVKNGFNGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL A +A DA+G E+VQ I +P Y+S S +DAA A+ LG YDV PI Sbjct: 293 LGLSGGIDSALVATMAADAVGGEHVQGISMPSMYSSEGSKDDAAQLAENLGASYDVQPIK 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + F + + G+ AEN+Q+RIRG I+MA SN + L T NKSE++ GY Sbjct: 353 PEFDAFQKQL------DLEGVAAENLQARIRGVIVMAYSNSKGLLALATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-GLGPL----------------TEV 459 T+YGD GG+ P+KD++KT+V+QL+ WRN GLG L E+ Sbjct: 407 TIYGDAVGGYAPIKDVFKTKVWQLSRWRNKALKEGLGLGALPVVGYDPNAEGVVPASGEL 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN--DQEYNDETVRY 517 IP + + K+PSAELRP Q D +SLP Y ILD ++ +E+ E + +++++TV Sbjct: 467 IPNNSIVKAPSAELRPEQKDSDSLPEYYILDKVLTAYIEHSEGRADLLAHADFDEQTVDT 526 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 V L+ +E+KRRQ P+G K++A +FGRDR P+++ FR+ Sbjct: 527 VMRLVDRAEWKRRQYPLGPKVSALAFGRDRRLPVTDAFRE 566 >gi|86604930|ref|YP_473693.1| NAD+ synthetase [Synechococcus sp. JA-3-3Ab] gi|86553472|gb|ABC98430.1| NAD+ synthetase [Synechococcus sp. JA-3-3Ab] Length = 556 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 219/565 (38%), Positives = 304/565 (53%), Gaps = 29/565 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ QLN VGD++GN + R A E G +L + +EL + GYPP DL+ + I+ Sbjct: 1 MKVALLQLNYTVGDLSGNAERIRAAVEAVAAAGAELAITSELALLGYPPRDLLLYPALIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + L + + +VVG P + + N+ L+ G I K LP Y Sbjct: 61 RVGQVLQQLAARLRE-SIPVVVGSVQPNPLPEGRPLYNAAAWLEGGQIRHWFQKSLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEF 170 F E R F G PI +R R+G ICEDIW + + + + + GA+ Sbjct: 120 DVFDEDRYFEPGSPPQPIEYRSRRVGFTICEDIWNDRDFWQHRRYHRDPVEEMARCGADV 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +L+ASP+ K K R +++ LPI+YVNQVGG D+LIFDGAS D + ++ Sbjct: 180 LINLSASPFSLGKQKLRVQMLGSLARKHALPILYVNQVGGNDDLIFDGASCALDCRGRVV 239 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 Q F M + P + E Y A VL RDYV K Sbjct: 240 AQAAAFQPDCLMVDVE----ALVHPPEEGPEVQGSRWPAEPEAELYEALVLGTRDYVSKC 295 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++GLSGGIDSA+ A IA DALG E V +++P Y+SP SL DA A+ LG Sbjct: 296 GFREVLLGLSGGIDSAVTAVIAADALGPERVLGVLMPSPYSSPGSLTDAYQLAQNLGIPT 355 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 LPI ++ + L+++ P I EN+QSRIRG +LMALSN +LLTT NKSE Sbjct: 356 LKLPIQSIMESYQHLLAEPFAGLPPDITEENLQSRIRGTLLMALSNKFGRLLLTTGNKSE 415 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY T+YGDMSGG + D+ KT V++LA W N H E IP IL K PS Sbjct: 416 LAVGYCTIYGDMSGGLAVISDVPKTWVYRLARWINRHQ---------ERIPLPILTKPPS 466 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELRP Q D +SLPPY +LD I++R +E +S Q + +TV+ V HL+ +E+KR Sbjct: 467 AELRPGQKDSDSLPPYDLLDAILQRHIEQHQSAGELVAQGFEPDTVQQVLHLVQSAEFKR 526 Query: 530 RQAPVGTKITAKSFGRDRLYPISNK 554 QAP G ++T ++FG PI+ + Sbjct: 527 HQAPPGLRVTDRAFGTGWRMPIAKR 551 >gi|296159039|ref|ZP_06841866.1| NAD+ synthetase [Burkholderia sp. Ch1-1] gi|295890600|gb|EFG70391.1| NAD+ synthetase [Burkholderia sp. Ch1-1] Length = 566 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 223/582 (38%), Positives = 329/582 (56%), Gaps = 39/582 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQ+N VGD AGN+ K A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQINVTVGDFAGNVEKIVAAARAAHNDGAKLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQD----------------QEGV-----LNS 99 F A ++A+ L + G ++VG P +D + GV N+ Sbjct: 60 FYAASAAALADLAAQLKPFTGLHVIVGHPLRDVTHTAAHGHGNANAPIERGVPPVDTFNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G + K +LPN F EKR F S ++ G++ICED W +++ Sbjct: 120 ASLIVDGEVRGTYRKQDLPNTEVFDEKRYFASDPQPFVFELDGVKYGVVICEDAW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ + N SPY+ NK R +I+ +I LP++YVN VG QDEL+FDG Sbjct: 179 AQMAKAAGAQVVLIPNGSPYHLNKEVVRFDILRARIRETGLPMVYVNMVGAQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF D Q +L +M F E + E+ + L + + L E Y A Sbjct: 239 SFVLDAQGELVAKMAQFEEATAIVEFENGKPLR----------TAIAPDLSIEAQVYAAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V+ +RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S DA Sbjct: 289 VMGVRDYINKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A A+ +G +YD + I + + F +++ ENIQ+RIRG +LMALSN Sbjct: 349 AEMARRVGVRYDEIAIAPMFDAFRGSLAEEFAGRAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 A++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN +V Sbjct: 409 AIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNQATTFG----KQDV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Y E V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYEVLDAIMRMYMEEDRSLAEIIAAGYAVEDVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 525 TRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPVE 566 >gi|319786171|ref|YP_004145646.1| NAD+ synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317464683|gb|ADV26415.1| NAD+ synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 545 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 222/559 (39%), Positives = 309/559 (55%), Gaps = 20/559 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFK 59 M L+IA+AQ + VG + N + EA + G D++LF EL ISGYPPEDL+ + Sbjct: 1 MKDSLRIALAQFDFPVGAVEANAGRIAEMIAEARDEYGADIVLFPELAISGYPPEDLLMR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 SF+ C A++ + + H G VVG+P + N+ +L G I A K LPN Sbjct: 61 PSFLARCQQALEQVAAGVH--GITAVVGWPESAGSVLYNAASVLRDGRIEATYRKRELPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILI--CEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F + +P VF + + + CED+W + +K GA+ + NAS Sbjct: 119 YAVFDERRYFEADPDGEPCVFEVGGVPVGVVVCEDLWFPEPMADTVK-AGAQLVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 P+ K +R ++ + + Y+N VGGQD L+FDGAS DG + F+ Sbjct: 178 PFERGKHAQRDALLAERTRETGAAVAYLNVVGGQDSLVFDGASVVADGNGTVHPAAAAFT 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + ++ + DD +M + A V +RDY KN F + + Sbjct: 238 DQWLVVDYDTAGRSFTPVQWMDDGDESMD------ALAWRAVVRGIRDYCGKNGFRRAWL 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL A+A +ALG ENV + LP +YT+ S + AA ALG + + +PI Sbjct: 292 GLSGGIDSALVLALAAEALGPENVVAVRLPSRYTAGLSNDLAAEQCAALGVRLETIPIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F + Q + + EN+QSR RG ILMALSN +LLTT NKSE +VGY T Sbjct: 352 AFTGFLQSLEQVFAGQEADTTEENLQSRSRGAILMALSNKFGGLLLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR Q Sbjct: 412 IYGDMCGGYAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRADQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 DQ+SLPPY +LD I+ R V+ E+S Y E V V L+ SE+KR+QA G Sbjct: 465 LDQDSLPPYDVLDGILYRFVDQEQSRGEIVAAGYAAEVVDRVLRLVRTSEWKRQQAAPGP 524 Query: 537 KITAKSFGRDRLYPISNKF 555 K++ ++FGR+R YPISN F Sbjct: 525 KVSRRAFGRERRYPISNGF 543 >gi|153003186|ref|YP_001377511.1| NAD+ synthetase [Anaeromyxobacter sp. Fw109-5] gi|152026759|gb|ABS24527.1| NAD+ synthetase [Anaeromyxobacter sp. Fw109-5] Length = 567 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 209/574 (36%), Positives = 300/574 (52%), Gaps = 26/574 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +IA+AQ+N VGD AGN AK R E A +G L++F EL + GYPP D + Sbjct: 1 MAPTGRIALAQVNTTVGDFAGNAAKIRAVTERARAEGATLVVFPELALCGYPPRDFLDLP 60 Query: 61 SFIQACSSAIDTLKSDTH-DGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKI 115 F++ + + L + IVVGFP GV N+ ++ G + AV K Sbjct: 61 EFLERAARTLAELAAPAEWSRDVAIVVGFPEGVAGAPPPGVYNAAALIADGRVAAVGRKS 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFRDI--RLGILICEDIWKN----------SNICKHL 163 LP Y F E R F+ S+ + RLG+ +CED+W + + L Sbjct: 121 LLPTYDVFDETRYFLPSDSSTAADAGGVGLRLGLSVCEDVWNDKRFWVHPRYARDPIAEL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 + GA + +++ASPY K R +++ + PI YVNQVGG D L+FDG S Sbjct: 181 VRGGAGLVVNISASPYAMGKPGLRERMLSASAAGHGAPIAYVNQVGGNDALVFDGGSMLV 240 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 + + F E + E S D A P E + Y+A VL + Sbjct: 241 GSDGAILARAPLFEEVLLVAEL-ATGAASAVPLGRDGVAVAPGAPDPEADEVYSALVLGV 299 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDYV+K F I+GLSGGIDSAL A +A DALG NV + +P +Y+S S EDAAA A Sbjct: 300 RDYVRKCGFRSAIVGLSGGIDSALTACLAADALGAANVLGVAMPSRYSSGHSREDAAALA 359 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 LG + + I + F + + + +N+Q+RIRG +LMALSN + ++L Sbjct: 360 DHLGIPFKEISIEPMHAAFLGQIEAAEGKPLGDLAEQNVQARIRGQLLMALSNDTGGLVL 419 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 +T NKSE++VGY TLYGDM+GG + D+ KT V++++ N+ + +IP Sbjct: 420 STGNKSELAVGYCTLYGDMAGGLAVIGDVPKTLVYRVSRAANARAGRT-------LIPER 472 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLL 522 K PSAEL+P Q DQ+SLPPY +LDDI++ VE + + + TVR V ++ Sbjct: 473 TFTKPPSAELKPGQVDQDSLPPYDVLDDILEAYVEERLPLDAIVARGHPEATVRRVLRMV 532 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 SEYKRRQA K++ K+FG R +PI++ +R Sbjct: 533 VASEYKRRQAAPVLKVSEKAFGEGRRFPIAHGYR 566 >gi|146295195|ref|YP_001178966.1| NAD+ synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145408771|gb|ABP65775.1| NH(3)-dependent NAD(+) synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 540 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 209/565 (36%), Positives = 313/565 (55%), Gaps = 40/565 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K R + + + +++F EL I GYPP+DL+F+K FI+ Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIRIIK--SHRDAKILIFPELAICGYPPKDLLFQKDFIE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + + D +VVG P + + NS +IL G I + K LP+Y Sbjct: 59 AAYKAIEEIAKEVEDSF--VVVGSPTKSHHVSKLFNSAIILHQGKIEKIIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R FI + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFIPSPAREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELSQKGAKVFIN 176 Query: 174 LNASPYYHNKLKKRH-EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ + +++ + +IYVNQVGG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGTAVIYVNQVGGNDELIFDGNSVVVSSDGRLVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E + ++ + D S A VL +RDY +K Sbjct: 237 AKEFEEDILEIKLEKIDKMPEVEIHEDIS------------WIKKALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +AV+ALG ENV + +P +Y+S S++DA + A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGPENVLGVAMPSRYSSEHSIKDAKSLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + PI D+ + + + + + ENIQ+RIRGNILM +SN ++LTT NKSE+ Sbjct: 345 IYPIEDVFKAYLRMFNTS-EMPLQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSEL 403 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PSA Sbjct: 404 AVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPSA 454 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q D +SLPPY ILD I+ +E +S Q Y + V + ++ +EYKR+ Sbjct: 455 ELRPNQKDTDSLPPYEILDPILVAYIEELKSVDEIVQMGYPKDLVLKIIKMVERAEYKRK 514 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QA G K+T+K+FG R PI ++ Sbjct: 515 QAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|330817967|ref|YP_004361672.1| NAD+ synthetase [Burkholderia gladioli BSR3] gi|327370360|gb|AEA61716.1| NAD+ synthetase [Burkholderia gladioli BSR3] Length = 561 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 226/576 (39%), Positives = 327/576 (56%), Gaps = 34/576 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+A+ A A++ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVARLVEAARAAHKDGAQLLVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQE----------------GVLNSVVILD 104 F A + A+ L + G ++VG P ++ G N+ ++ Sbjct: 60 FFAAAAEALAELAARLAPLEGLAVLVGHPLRESSADGNANRPIERGAAPVGTYNAASLIV 119 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G ++A K +LPN F EKR F + R GI+ICEDIW +++ + K Sbjct: 120 GGEVVATYRKQDLPNTEVFDEKRYFATDPQPCVFELNGTRFGIVICEDIW-HASAAQLAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GAE L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF D Sbjct: 179 AAGAEVLLVPNGSPYHMNKDAVRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 +L +M F E + + E+ + + L E Y A VL +R Sbjct: 239 AAGELVARMAQFEEGHAIVEFE----------GARPLPGEIAPALSTEAQVYRALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGALIGLSGGVDSALVLAVACDALGPDRVRAVMMPSRYTADISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++LT Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAAEFAGREEDATEENIQARIRGTLLMALSNKFGSIVLT 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L VIP I Sbjct: 409 TGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEFGRLA----VIPERI 464 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLY 523 L ++PSAELR +QTDQ+SLP Y LD I++ +E + Y++ V V L+ Sbjct: 465 LTRAPSAELRENQTDQDSLPSYDALDAIMRMYMEEDRPLAEIVAAGYDEADVTRVTRLIK 524 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAP+G ++T ++FGRD YPI+++F + I Sbjct: 525 INEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERI 560 >gi|302545965|ref|ZP_07298307.1| glutamine-dependent NAD(+) synthetase [Streptomyces hygroscopicus ATCC 53653] gi|302463583|gb|EFL26676.1| glutamine-dependent NAD(+) synthetase [Streptomyces himastatinicus ATCC 53653] Length = 589 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 207/593 (34%), Positives = 306/593 (51%), Gaps = 46/593 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L++A+ Q++ VGD+AGN + QG L+ F E+ ++GYP EDL + SF Sbjct: 5 PQLRLALNQIDSTVGDLAGNAESIVHWTRHSAEQGAHLVAFPEMVLTGYPVEDLALRSSF 64 Query: 63 IQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL---------NSVVILDAGNIIA 110 ++A +A+ L G G ++VG+ + + N+ +L G I+ Sbjct: 65 VEASRTALRALAERLDAEGLGELPVIVGYLDRSERARRYGQPAGSPQNAAAVLHRGAIVL 124 Query: 111 VRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF 170 K +LPNY F E R F+ G + + I + + ICED+W++ GA Sbjct: 125 TFAKHHLPNYGVFDEFRYFVPGDTMPVVRVHGIDVALAICEDLWQDGGRVPAAHSAGAGL 184 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L S+NASPY K R ++V + Y+ +GGQDEL+FDG S ++ Sbjct: 185 LLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIIVGRDGEVI 244 Query: 231 FQMKHFSEQNFMTEWHY--------------DQQLSQWNYMSDDSASTMYIPL------- 269 + F+E + + D +S D Sbjct: 245 ARAPQFAEGCVVVDLDLPAADPDAVPEGVVDDGLRIDHRTLSADPLPAYDPEPGLAGGEA 304 Query: 270 ---QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 ++E Y A V+ LR YV KN F V+IGLSGGIDSAL AAIA DA+G +NV + + Sbjct: 305 ERLGDDEEIYTALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDAVGAQNVYGVAM 364 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +Y+S S+ DA A+ G + +PI + + + + +G+ EN+QSR+ Sbjct: 365 PSRYSSEHSIGDATELARRTGLNFRTVPIAPMFDAYMGSLH------LTGLAEENLQSRL 418 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMALSN ++L NKSE++ GY TLYGD G + P+KD+YKT +F+LA WRN Sbjct: 419 RGTMLMALSNQEGHIVLAPGNKSELACGYSTLYGDSVGAYGPIKDVYKTSIFRLAKWRNR 478 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 G T IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 479 AAEERG---QTLPIPENSITKPPSAELRPGQVDTDSLPDYDVLDRILELYVDRDQGRQEI 535 Query: 507 -DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 Y+DE V + L+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+H Sbjct: 536 VAAGYDDELVTRILRLVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWREH 588 >gi|307327840|ref|ZP_07607023.1| NAD+ synthetase [Streptomyces violaceusniger Tu 4113] gi|306886552|gb|EFN17555.1| NAD+ synthetase [Streptomyces violaceusniger Tu 4113] Length = 584 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 202/592 (34%), Positives = 305/592 (51%), Gaps = 44/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+ GN + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLDGNTESILHWTRHSAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL---------NSVVILDAGNII 109 F++A +A+ +L + G G +VVG+ + + N+ +L G + Sbjct: 61 FVEASRAALHSLAERLNAEGLGELPVVVGYLDRSERARRYGQPAGSPQNAGAVLHRGTVA 120 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G + + I + + ICED+W++ GA Sbjct: 121 LTFAKHHLPNYGVFDEFRYFVPGDTLPMVRVHGIDIALAICEDLWQDGGRVPASCSAGAG 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY K R ++V + Y+ +GGQDEL+FDG S D ++ Sbjct: 181 LLLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDGEV 240 Query: 230 AFQMKHFSEQNFMTEW----------------------HYDQQLSQWNYMSDDSASTMYI 267 + F+E + + H + A Sbjct: 241 IARAPQFAEGCVLLDLELPAADPDSVPEGVVDDGLRIDHVTLSADPLPGYEPELAGGEAE 300 Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y A V+ LR Y KN F V+IGLSGGIDSAL AA+A DA+G +NV + +P Sbjct: 301 RLGDDEEVYTALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAALACDAVGAQNVYGVAMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 +Y+S S+ DA A+ G + + I + + + + + +G+ EN+QSR+R Sbjct: 361 SRYSSEHSVADATELARRTGLNFRTVSIAPMFDAYMDSL------QLTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++ GY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTTLMAISNQEGHIVLAPGNKSELACGYSTLYGDSVGAYGPIKDVYKTSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ + Sbjct: 475 AEERGQTP---PIPENSISKPPSAELRPGQVDTDSLPDYEVLDRILELYVDRDQGRKDIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 Y+D V + L+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 532 AAGYDDPLVTRILRLVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWRER 583 >gi|302550954|ref|ZP_07303296.1| NH(3)-dependent NAD(+) synthetase [Streptomyces viridochromogenes DSM 40736] gi|302468572|gb|EFL31665.1| NH(3)-dependent NAD(+) synthetase [Streptomyces viridochromogenes DSM 40736] Length = 603 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 206/592 (34%), Positives = 309/592 (52%), Gaps = 44/592 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L++A+ Q++ VGD+A N R + QG L+ F E+ ++GYP EDL + SF Sbjct: 21 PQLRLALNQIDSSVGDLAQNAESIVRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSF 80 Query: 63 IQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNII 109 ++A +A+ +L + D G G ++VG+ + N+ +L G ++ Sbjct: 81 VEASRAALRSLAARLADEGFGELPVIVGYLDRSATAQPKYGQPAGAPQNAGAVLYGGEVV 140 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G S + + + + ICED+W++ + A Sbjct: 141 LNYAKHHLPNYGVFDEFRYFVPGDSMPVLRVHGVDVALAICEDLWQDGGRVPAARSARAG 200 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY NK R ++V + Y+ +GGQDEL+FDG S D ++ Sbjct: 201 LLLSINASPYERNKDDTRLDLVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDKNGEV 260 Query: 230 AFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIPL-------- 269 + FSE + + D L + + Y P Sbjct: 261 VARAPQFSEGCVVLDLDLPAASPDAPTGVVDDGLRIDRVVLSEEPLAAYEPELTGGYADR 320 Query: 270 -QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 ++E Y+A V+ LR YV KN F V+IGLSGGIDS+L AAIA DA+G +NV + +P Sbjct: 321 LDDDEEVYSALVVGLRAYVAKNGFTSVLIGLSGGIDSSLVAAIACDAVGAQNVYGVSMPS 380 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR+RG Sbjct: 381 KYSSDHSKDDAAELARRTGLNYRTVAIEPMFDAYMGSL------RLTGLAEENLQSRLRG 434 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT +F+L+ WRN Sbjct: 435 TLLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSIFRLSEWRNRAA 494 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-D 507 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ + Sbjct: 495 RERGQTP---PIPENSITKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDRGADEIVA 551 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y+ V ++ +EYKRRQ P GTKI+ K FG+DR PI+N +R+ + Sbjct: 552 AGYDPALVTKTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPITNGWRESV 603 >gi|260575409|ref|ZP_05843408.1| NAD+ synthetase [Rhodobacter sp. SW2] gi|259022329|gb|EEW25626.1| NAD+ synthetase [Rhodobacter sp. SW2] Length = 552 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 234/557 (42%), Positives = 329/557 (59%), Gaps = 9/557 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VG IA N A AR + + G ++ E+FI+GY +DL+ K Sbjct: 1 MAETFRLTLAQLNPTVGAIAANAALARDVWAQGHAAGAQMVALPEMFITGYQTQDLILKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 SF+ A +A+ L D G + +G P + N +L G + A K +LPN Sbjct: 61 SFVAAAMAAVQALAVDCAT-GPALGIGGPVVQDGQLYNGYYVLAGGRVAATVLKHHLPND 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F + P+ +RLGI ICED W + ++ L GA+ L N SPY+ Sbjct: 120 GVFDEKRVFAAAEVGAPVTVGPLRLGIPICEDAW-HPDVTAALAAAGADILLIPNGSPYH 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ +++ L ++Y+N GGQD+ +FDGASF + Q+A QM F + Sbjct: 179 RGKPLQRVRLMQTRVAETGLALVYLNMTGGQDDQVFDGASFVVNPGGQIALQMPQFDDAV 238 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++ Q Q ++ EADY ACVLSLRDY+ K F +V++GLS Sbjct: 239 VQVDFTRGPQGWQAVPGDLTPIPRIW------EADYRACVLSLRDYLAKTGFKQVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ A IA DA+G NV+ +MLP +TS SL+DA A+ LGC+ D +PI Sbjct: 293 GGIDSAIVATIAADAIGPANVRCVMLPSGFTSAHSLQDAGEVARNLGCRLDTVPIGGAQA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 + + GI ENIQSR+RG +LMA+SN + AMLLTT NKSE++VGY T+YG Sbjct: 353 AVGAALQPLFAGTAPGITEENIQSRLRGLMLMAISNKTGAMLLTTGNKSEMAVGYCTIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KD+YKT+VF+ WRN + LGP VIP ++ K+PSAELR Q D Sbjct: 413 DMNGGYNPIKDMYKTRVFETCRWRNENHRPWMLGPTGAVIPERVISKAPSAELREGQRDD 472 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPYP+LD I++ +V+ E+S Q ++ V+ VE LLY SEYKR QA GT++T Sbjct: 473 DSLPPYPVLDAILEGLVDREQSVAEIVAQGHDLAVVKRVEQLLYVSEYKRYQAAPGTRLT 532 Query: 540 AKSFGRDRLYPISNKFR 556 +FG DR YPI+N++R Sbjct: 533 PHAFGLDRRYPIANRWR 549 >gi|254487562|ref|ZP_05100767.1| glutamine-dependent NAD(+) synthetase [Roseobacter sp. GAI101] gi|214044431|gb|EEB85069.1| glutamine-dependent NAD(+) synthetase [Roseobacter sp. GAI101] Length = 552 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 240/559 (42%), Positives = 333/559 (59%), Gaps = 9/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +I + QLNP VGD+AGN AR A + G DL+ E+FI+GY +DLV K+ Sbjct: 1 MTSRFRITLGQLNPTVGDLAGNADLARDAWAKGKAAGADLVALPEMFITGYNAQDLVMKR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + I+ L +D D G + +G P + + N+ +IL G + + K NLPN Sbjct: 61 AFQLDVMTHINALAADCAD-GPALAIGAPWVEGAELYNAYLILKGGKVASRAFKHNLPNE 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + F E R F S P D R+G ICED W + ++ + L + GAEFL N SPYY Sbjct: 120 TVFDEVRVFDSAPLAGPYSVGDTRIGSPICEDAW-HPDVAETLAETGAEFLLVPNGSPYY 178 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K + R + ++ LP+IY+N VGGQD+ +FDGASF + +LAFQM F + Sbjct: 179 RGKFETRLNNMVARVVETELPLIYLNMVGGQDDQVFDGASFGLNPGGKLAFQMPTFDAE- 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + +Q W + A E E DY V LRDY++K F KV++GLS Sbjct: 238 -IAHVDLEQGSEGWRIVDGPKAHLP----SEYEQDYRVMVQGLRDYMRKTGFKKVLLGLS 292 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSA+ AAIAVDALG + V+ +MLP +YTS SL+DA A AKALGC+YD +PI Sbjct: 293 GGIDSAIVAAIAVDALGADKVRCVMLPSEYTSQASLDDAEAVAKALGCRYDYVPIKQGRA 352 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 ++ + + ENIQSR+RG +LMA+SN MLLTT NKSE++VGY T+YG Sbjct: 353 AITETLAPLFEGMKPDLTEENIQSRLRGLLLMAMSNKFGEMLLTTGNKSEVAVGYATIYG 412 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GG+NP+KDLYKT+VF+ WRN + +GP +VI P I++K PSAELR Q D Sbjct: 413 DMAGGYNPIKDLYKTRVFETCRWRNENHRDWMMGPAGKVITPRIIDKPPSAELREDQKDS 472 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP YP LD ++ +V+ + S + ++ + + VEHL+Y SEYKR Q+ G ++T Sbjct: 473 DSLPDYPDLDAMLDILVDQDGSIADCVAAGFDRDVAKKVEHLIYISEYKRFQSAPGPRLT 532 Query: 540 AKSFGRDRLYPISNKFRDH 558 +F DR YPI N++RD Sbjct: 533 KGAFWLDRRYPIVNRWRDP 551 >gi|21220709|ref|NP_626488.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces coelicolor A3(2)] gi|13751883|emb|CAC37264.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces coelicolor A3(2)] Length = 613 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 208/595 (34%), Positives = 305/595 (51%), Gaps = 49/595 (8%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L++A+ Q++ VGDI GN + +G L+ F E+ ++GYP EDL + SF Sbjct: 26 PRLRLALNQIDSTVGDIDGNAESVLHWTRHSAERGAHLVAFPEMTLTGYPVEDLALRSSF 85 Query: 63 IQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNII 109 ++A +A+ +L + D G G ++VG + N+ +L G + Sbjct: 86 VEASRAALRSLAARLADEGLGTVPVIVGHLDRSATAQPRYGQPAGAPQNAAAVLYGGEVA 145 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G + + R + + + ICED+W++ + A Sbjct: 146 LSFAKHHLPNYGVFDEFRYFVPGDTLPVVRVRGVDVALAICEDLWQDGGRVPAARSARAG 205 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY +K R E+V + Y+ GGQDEL+FDG S D + Sbjct: 206 LLLSVNASPYERDKDDTRLELVRRRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGTV 265 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY----------------------- 266 + F+E + + + D + Sbjct: 266 LARAPQFTEGCMVLDLDLPAADADPPTGVVDDGLRIDRVVLPGEAGREQPLPAGEPWLSG 325 Query: 267 ---IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 PL ++E Y+A V LR YV KN F V+IGLSGGIDSAL A+IA DALG E+V Sbjct: 326 GHAEPLDDDEEVYSALVTGLRAYVAKNGFRSVLIGLSGGIDSALVASIACDALGAEHVYG 385 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 + +P KY+S S +DAA A+ G Y + I + + + + E +G+ EN+Q Sbjct: 386 VSMPSKYSSGHSRDDAAELARRTGLHYRTVSIEPMFDAYTGAL------ELTGLAEENLQ 439 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 SR+RG +LMALSN ++L NKSE++VGY TLYGD GG+ P+KD+YKT VF+LA W Sbjct: 440 SRLRGTLLMALSNQEGHLVLAPGNKSELAVGYSTLYGDSVGGYGPIKDVYKTSVFRLAEW 499 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 RN G P +P + + K PSAELRP Q D +SLP YP+LD I+ V+ + Sbjct: 500 RNRAARDRGRTP---PVPENSITKPPSAELRPGQVDTDSLPDYPVLDAILALYVDRDRGA 556 Query: 504 INN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 Y+ E V ++ +EYKRRQ P GTKI+ K FG+DR P++N++R+ Sbjct: 557 DEIVAAGYDRELVTRTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPVTNRWRE 611 >gi|302560983|ref|ZP_07313325.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces griseoflavus Tu4000] gi|302478601|gb|EFL41694.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces griseoflavus Tu4000] Length = 586 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 210/591 (35%), Positives = 309/591 (52%), Gaps = 44/591 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN R + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSSVGDLAGNAETIVRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A + + +L S + G G +VVG+ + N+ +L G + Sbjct: 61 FVEASRAGLRSLASRLAEEGLGELPVVVGYLDRSAAAQPKYGQPAGAPQNAGAVLYGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + R I + + ICED+W++ + A Sbjct: 121 VLSFAKHHLPNYGVFDEFRYFVPGDTMPVVRVRGIDVALAICEDLWQDGGRVPAARSARA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D Sbjct: 181 GLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMMGGQDELVFDGDSIVVDRDGG 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD---------------------SASTMYI 267 + + FSE + + ++ D S Sbjct: 241 VVARAPQFSEACVVVDLELPAAVADAPVGVVDDGLRIDRVVLSEEPVPAYEAGSGEAYAE 300 Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR YV KN F V+IGLSGGIDSAL AA+A DA+G ENV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYVAKNGFRSVVIGLSGGIDSALVAALACDAVGAENVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSEHSKDDAAELARRTGLNYRTVAIEPMFDAYMGALG------LTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTLLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAEWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 + G P IP + + K PSAELRP Q D +SLP YP+LD I+ V+ + Sbjct: 475 AVERGETP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILALYVDRDRGADEIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ E V ++ +EYKRRQ P GTKI+ K FG+DR PI+N +R+ Sbjct: 532 AAGFDAELVTRTLRMVDRAEYKRRQYPPGTKISPKGFGKDRRLPITNGWRE 582 >gi|328881984|emb|CCA55223.1| NAD synthetase or Glutamine amidotransferase chain of NAD synthetase [Streptomyces venezuelae ATCC 10712] Length = 609 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 213/590 (36%), Positives = 302/590 (51%), Gaps = 44/590 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L++A+ Q++ VGDIAGN A QG L+ F E+ ++GYP EDL + SF Sbjct: 26 PQLRLALNQIDSTVGDIAGNAEAIVHWTRHAAGQGAHLVAFPEMALTGYPVEDLALRSSF 85 Query: 63 IQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL----------NSVVILDAGNII 109 ++A +A+ L D G G +VVG+ + + N+ +L G ++ Sbjct: 86 VEASRAALRGLARRLADEGFGEVPVVVGYLDRSERAEPKLGLPAGSPENAAAVLHRGEVV 145 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G + + I + + ICED+W+ + A Sbjct: 146 LRFAKHHLPNYGVFDEYRYFVRGDTMPVLRVHGIDVALAICEDLWQEGGRVPAARHARAG 205 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY NK R E+V + Y+ GGQDEL+FDG S D ++ Sbjct: 206 LLLSVNASPYERNKDDTRLELVRKRAQEAGCVTAYLASTGGQDELVFDGDSIVVDAAGEV 265 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQW---------------------NYMSDDSASTMYIP 268 + F E + + + + + Sbjct: 266 IARAPQFVEGSVILDLELPAADPEAPEGLVNDGLTVDRVVVSEEPLPAYEPELTGGYAHR 325 Query: 269 LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 L++EE Y+A V+ LR YV KN F V++GLSGGIDSAL AAIA DALG ENV + +P Sbjct: 326 LEDEEEVYSALVIGLRAYVAKNGFRSVLVGLSGGIDSALVAAIACDALGAENVYGVSMPS 385 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 KY+S S DAA A+ G Y + I + + + + +G+ EN+QSR+RG Sbjct: 386 KYSSDHSRGDAAELARRTGLHYRTVSIEPMFDAYMGSLG------LTGLAEENLQSRLRG 439 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 LMALSN ++L NKSE++VGY TLYGD G F P+KD+YK+ VF+LA WRN Sbjct: 440 TTLMALSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAFGPIKDVYKSTVFRLARWRNRAA 499 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-D 507 G P IP S + K PSAELRP Q D +SLP Y LD ++ V+ + Sbjct: 500 EERGQTP---PIPESSISKPPSAELRPGQVDTDSLPDYDTLDAVLALYVDQDRGREEIVA 556 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 Y++E V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 557 AGYDEELVTRTLRMVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWRE 606 >gi|170730173|ref|YP_001775606.1| NAD synthetase [Xylella fastidiosa M12] gi|167964966|gb|ACA11976.1| NAD(+) synthase (glutamine-hydrolyzing) [Xylella fastidiosa M12] Length = 545 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 217/560 (38%), Positives = 308/560 (55%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N+ + E+A G D+++F EL +SGYPPEDL+ + Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNVERIIALIEQARDEHGADVVMFPELALSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C AI+ + + TH VVG+P+ V N +L G + K LPN Sbjct: 61 PGFLAHCQVAIERIAAATH--SIVAVVGWPQSAGSVVYNVASVLCDGQVEQTYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y F E+R F S + + +G+LICED+W S GAE + NAS Sbjct: 119 YGVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLW-FSEPLADTVCGGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ FS Sbjct: 178 PYERGKHAQRDVLLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAAAFS 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + D S+ ++ + + + + A V ++DY +KN F KV + Sbjct: 238 DQWLVV----DYMRSERRFVPLQWVAESEVSINALV--WRAVVRGVQDYCRKNGFSKVWV 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + + + I Sbjct: 292 GLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVRLETVAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY T Sbjct: 352 VFEGLLAALGPLFAGMSPDATEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKD+YK+QVF+LA WRN+ IPP ++ + PSAELR Q Sbjct: 412 IYGDMCGGYAPLKDIYKSQVFELAQWRNTVSD-------VLAIPPGVIHRPPSAELRAQQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ V+ E+S + Y V YV +L+ +E+KR QA G Sbjct: 465 TDQDSLPPYEVLDGILSLYVDQEQSREDIIAAGYTAGVVDYVLNLVRINEWKRHQAAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPISN +R Sbjct: 525 KVSQRAFGRERRYPISNAYR 544 >gi|15838555|ref|NP_299243.1| NAD synthetase [Xylella fastidiosa 9a5c] gi|81547291|sp|Q9PC24|NADE_XYLFA RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolysing] gi|9107063|gb|AAF84763.1|AE004015_6 NH3-dependent NAD synthetase [Xylella fastidiosa 9a5c] Length = 545 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 218/560 (38%), Positives = 309/560 (55%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N + E+A G D+++F EL +SGYPPEDL+ + Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNAERIIALIEQARDEHGADVVMFPELALSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C AI+ + + TH G VVG+P+ V N +L G + K LPN Sbjct: 61 PGFLAHCQVAIERIAAATH--GIVAVVGWPQSAGSVVYNVASVLCDGQVEQTYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F S + + +G+LICED+W S GAE + NAS Sbjct: 119 YAVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLW-FSEPLADTVCGGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ FS Sbjct: 178 PYERGKHAQRDALLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAAAFS 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + D S+ ++ + + + + A V ++DY +KN F KV + Sbjct: 238 DQWLVV----DYMRSERRFVPLQWVAESEVSINALV--WRAVVRGVQDYCRKNGFSKVWV 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + + + I Sbjct: 292 GLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVRLETVAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY T Sbjct: 352 VFEGLLAALGPLFAGMAPDATEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKD+YK+QVF+LA WRN+ IPP ++ + PSAELR Q Sbjct: 412 IYGDMCGGYAPLKDIYKSQVFELAQWRNTVSD-------VLAIPPGVIHRPPSAELRAQQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ V+ E+S + Y V YV +L+ +E+KR QA G Sbjct: 465 TDQDSLPPYEVLDGILSLYVDQEQSREDIIAAGYAAGVVDYVLNLVKINEWKRHQAAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPISN +R Sbjct: 525 KVSQRAFGRERRYPISNAYR 544 >gi|297243357|ref|ZP_06927290.1| NAD synthase [Gardnerella vaginalis AMD] gi|296888604|gb|EFH27343.1| NAD synthase [Gardnerella vaginalis AMD] Length = 565 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 218/579 (37%), Positives = 315/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQ++ VG+I N+ K + A + G +++F E+ ++GYP EDL + + Sbjct: 1 MSFLRLALAQIDTCVGNIDSNVEKVLKYAARAKQSGARMVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKIN 116 F A A D L S + G G +VVG D+ N +++L G + DK Sbjct: 61 FRTAAQKAADLLASKLSEEGLGELYVVVGTVGFDESAGKPRNRLLVLHEGKSVLQYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F SG + + IRLG ICEDIW++ L K G + L ++N Sbjct: 121 LPNYGVFDEFRIFSSGNKCELLEVDGIRLGFAICEDIWQDGGPVARLAKLGIDALITMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R + + V+ P++YVNQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTHVRLSLAQKRAVEVNAPVVYVNQVGGQDDLVFDGGSFVVDSDGTLLERSAMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 +E ++ N + S++ L +E Y ACV+ LRDY++KN F V Sbjct: 241 AEDLSFVDFD--------NSLKKQKVSSIAPKLDADEEVYCACVVGLRDYMRKNGFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL A +A DA G NV I +P Y+S S +DA A+ +G YDV PI Sbjct: 293 LGLSGGIDSALVATMAADACGGANVYGISMPSMYSSDGSKDDARDLAERIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F S +S G+ AEN+Q+R+RG I+MA SN + L T NKSE++ GY Sbjct: 353 PLFKAFQSQLS------LEGVAAENLQARVRGVIVMAYSNSRGVLALATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS---GLGPL--------------TEV 459 T+YGD GG+ P+KDL KT+V+ L+ WRN G+ P+ + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWALSRWRNRAANAGVGIGMLPIVGYEDSQKAKAPQDGVL 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + + K PSAELRP Q D +SLP Y +LD +++ +E + +++ TV V Sbjct: 467 IPVNSIIKPPSAELRPGQKDSDSLPEYDLLDRVLEAHIELAHGRADLLADGFDEHTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K++A +FGRDR P++ FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVSAIAFGRDRRMPVTTAFRE 565 >gi|28198744|ref|NP_779058.1| NAD synthetase [Xylella fastidiosa Temecula1] gi|182681436|ref|YP_001829596.1| NAD synthetase [Xylella fastidiosa M23] gi|81438866|sp|Q87D47|NADE_XYLFT RecName: Full=Probable glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolysing] gi|28056835|gb|AAO28707.1| NH3-dependent NAD synthetase [Xylella fastidiosa Temecula1] gi|182631546|gb|ACB92322.1| NAD+ synthetase [Xylella fastidiosa M23] Length = 545 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 216/560 (38%), Positives = 304/560 (54%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N + E+A G D+++F EL +SGYPPEDL+ + Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNAERIIALIEQARDEHGADVVMFPELALSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C AI+ + + TH G VVG+P+ V N +L G + K LPN Sbjct: 61 PGFLAHCQVAIERIAAATH--GIVAVVGWPQSAGSVVYNVASVLCDGQVEQTYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F S + + +G+LICED+W S GAE + NAS Sbjct: 119 YAVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLW-FSEPLADTVCGGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ FS Sbjct: 178 PYERGKHAQRDALLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAAAFS 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + + + + + + A V ++DY +KN F KV + Sbjct: 238 DQWLVVD------YMRSERRFVPLQWVVESEVSINALVWRAVVRGVQDYCRKNGFSKVWV 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + + + I Sbjct: 292 GLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVRLETVAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY T Sbjct: 352 VFEGLLAALGPLFAGMAPDATEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKD+YK+QVF+LA WRN IPP ++ + PSAELR Q Sbjct: 412 IYGDMCGGYAPLKDIYKSQVFELAQWRNRVSD-------VLAIPPGVIHRPPSAELRAQQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ V+ E+S + Y V YV +L+ +E+KR QA G Sbjct: 465 TDQDSLPPYEVLDGILSLYVDQEQSREDIIAAGYAAGVVDYVLNLVRINEWKRHQAAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPISN +R Sbjct: 525 KVSQRAFGRERRYPISNAYR 544 >gi|289772035|ref|ZP_06531413.1| NAD(+) synthase [Streptomyces lividans TK24] gi|289702234|gb|EFD69663.1| NAD(+) synthase [Streptomyces lividans TK24] Length = 596 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 208/595 (34%), Positives = 305/595 (51%), Gaps = 49/595 (8%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L++A+ Q++ VGDI GN + +G L+ F E+ ++GYP EDL + SF Sbjct: 9 PRLRLALNQIDSTVGDIDGNAESVLHWTRHSAERGAHLVAFPEMTLTGYPVEDLALRSSF 68 Query: 63 IQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNII 109 ++A +A+ +L + D G G ++VG + N+ +L G + Sbjct: 69 VEASRAALRSLAARLADEGLGTVPVIVGHLDRSATAQPRYGQPAGAPQNAAAVLYGGEVA 128 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G + + R + + + ICED+W++ + A Sbjct: 129 LSFAKHHLPNYGVFDEFRYFVPGDTLPVVRVRGVDVALAICEDLWQDGGRVPAARSARAG 188 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY +K R E+V + Y+ GGQDEL+FDG S D + Sbjct: 189 LLLSVNASPYERDKDDTRLELVRRRAQEAGCTTAYLAMTGGQDELVFDGDSIVVDRDGTV 248 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY----------------------- 266 + F+E + + + D + Sbjct: 249 LARAPQFTEGCMVLDLDLPAADADPPTGVVDDGLRIDRVVLPGEAGREQPLPAGEPWLSG 308 Query: 267 ---IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 PL ++E Y+A V LR YV KN F V+IGLSGGIDSAL A+IA DALG E+V Sbjct: 309 GHAEPLDDDEEVYSALVTGLRAYVAKNGFRSVLIGLSGGIDSALVASIACDALGAEHVYG 368 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 + +P KY+S S +DAA A+ G Y + I + + + + E +G+ EN+Q Sbjct: 369 VSMPSKYSSGHSRDDAAELARRTGLHYRTVSIEPMFDAYTGAL------ELTGLAEENLQ 422 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 SR+RG +LMALSN ++L NKSE++VGY TLYGD GG+ P+KD+YKT VF+LA W Sbjct: 423 SRLRGTLLMALSNQEGHLVLAPGNKSELAVGYSTLYGDSVGGYGPIKDVYKTSVFRLAEW 482 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 RN G P +P + + K PSAELRP Q D +SLP YP+LD I+ V+ + Sbjct: 483 RNRAARDRGRTP---PVPENSITKPPSAELRPGQVDTDSLPDYPVLDAILALYVDRDRGA 539 Query: 504 INN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 Y+ E V ++ +EYKRRQ P GTKI+ K FG+DR P++N++R+ Sbjct: 540 DEIVAAGYDRELVTRTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPVTNRWRE 594 >gi|312195611|ref|YP_004015672.1| NAD+ synthetase [Frankia sp. EuI1c] gi|311226947|gb|ADP79802.1| NAD+ synthetase [Frankia sp. EuI1c] Length = 597 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 210/602 (34%), Positives = 306/602 (50%), Gaps = 47/602 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ++ VGD+ GN + A +G L+ F EL ++GYPPEDLV ++S Sbjct: 1 MPQLRIALAQVDTTVGDLDGNADLVSAWTKRALAEGAHLVAFGELTLTGYPPEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGG---AGIVVGF----------PRQDQEGVLNSVVILDAGNI 108 ++ A +A+ L D G +VVG+ + N+ +L G + Sbjct: 61 YVAASRAALHRLARRLEDEGAGEIAVVVGYLDASPTPAPAVGRPAGEPQNTAAVLWRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 +A K +LPNY F E R F+ G + + + + ICED+W+ + G Sbjct: 121 VARYAKHHLPNYGVFDEFRYFVPGNDFPVLRLHGVDVALTICEDLWQAGGPVAVARAAGV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +N SPY K R E+ + PI YVN VGGQDELIFDG S D Q Sbjct: 181 GLLLCINGSPYEQGKSHHRDELCARRAVEAGAPIAYVNLVGGQDELIFDGDSLVADAAGQ 240 Query: 229 LAFQMKHFSEQNFMTEWHY-------------------DQQLSQWNYMSDDSASTMYIPL 269 + + + F+E + + D + P Sbjct: 241 VIARAEVFTETLMVVDLDLPSGAEAGPDGLVTGPVDALDGTSMTVTRRELTTEPLPAFPA 300 Query: 270 QEEE---------ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN 320 + Y A V RDYV+KN F V++GLSGGIDSAL A IAVDALG E Sbjct: 301 RPPALAARPDPAAELYEALVTGTRDYVRKNGFRSVVLGLSGGIDSALVATIAVDALGAEA 360 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 V T+ +P ++S S++DAA A G +++V+ I V+ F + G+ AE Sbjct: 361 VHTVAMPSVHSSAGSVQDAADLAHRQGTRHEVIAIQPTVDAFHGALEGTGG--LHGLAAE 418 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GG+ P+KD+ KT V+ L Sbjct: 419 NLQARVRGTLLMALSNEHGHLVLTTGNKSELATGFSTLYGDSAGGYAPIKDVSKTNVWAL 478 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE 500 + WRN+ G P IP I+ K PSAEL P Q D + LP Y ILD ++ V + Sbjct: 479 SRWRNAEAERRGATP---PIPEIIITKPPSAELAPGQLDSDRLPDYGILDPVLDDYVSQD 535 Query: 501 ESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 ++ V V L+ +EYKRRQ P G K+T+K+FGRDR PI++++R+ Sbjct: 536 MGRAELVAAGHDPAVVDRVIRLVDLAEYKRRQNPPGPKVTSKAFGRDRRLPITSRWREKP 595 Query: 560 SE 561 ++ Sbjct: 596 TQ 597 >gi|198282730|ref|YP_002219051.1| NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667784|ref|YP_002424924.1| glutamine-dependent NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247251|gb|ACH82844.1| NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519997|gb|ACK80583.1| glutamine-dependent NAD+ synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 549 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 231/552 (41%), Positives = 319/552 (57%), Gaps = 18/552 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+N VGD+AGN + A EA G DL+L EL +SGYPPEDL+ + F+Q Sbjct: 1 MRIALAQVNCRVGDVAGNADRLLAAAAEAQAAGADLLLTPELALSGYPPEDLLLRSDFLQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C +A+ ++VG PR+ QE + NS +L G A K LPNY+ F Sbjct: 61 DCDAAMQR---LAAAAPLPMLVGHPRRVQEQLYNSAGLLRGGRAEAFYHKHCLPNYAVFD 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F G + IR G+ ICED+W + + + QGAE L LNASPY+ NK Sbjct: 118 EVRYFTPGAQSLVFTCAGIRCGVAICEDVWCGPGVAQAAQAQGAELLLVLNASPYHLNKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 + R + V + HLPI+YVN VGGQDEL+FDG SF D LA + +E + + Sbjct: 178 RVREDEVGALAARCHLPIVYVNLVGGQDELVFDGQSFAADRNGLLALRAARCAEALVLLD 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 D + + + E Y+ L + DYV+KN F ++GLSGG+D Sbjct: 238 VDRDDAGIRLQ-----ADRPLQPVPDESAEVYDVLRLGVHDYVEKNGFPGAVLGLSGGVD 292 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A+AVDALG E V +++P +YT+ S+ DA A A++LG + D++ I L + + Sbjct: 293 SALTLAVAVDALGAERVHALIMPSRYTAEMSIADAVAEARSLGVRTDIVSIEGLFHSYLE 352 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + EN+Q+RIR +LMA SN +LLTT NKSEI+VGY TLYGDM+G Sbjct: 353 TLAPLFAGRAADTTEENLQARIRAALLMAYSNKFGHLLLTTGNKSEIAVGYATLYGDMAG 412 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF +KD KT V++LA +RNS L VIP +L + PSAEL P Q DQ+SLP Sbjct: 413 GFAVIKDCPKTLVYRLARYRNS---------LGPVIPERVLTRPPSAELAPDQRDQDSLP 463 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY +LD II VE + S ++ + ETV V L+ +EYKRRQA G +I+A++F Sbjct: 464 PYEVLDAIIAAYVEEDHSAVDLIAAGFPAETVMRVLRLIDRAEYKRRQAAPGVRISARAF 523 Query: 544 GRDRLYPISNKF 555 G+DR YPI+N + Sbjct: 524 GKDRRYPITNGY 535 >gi|254497097|ref|ZP_05109918.1| glutamine dependent NAD+ synthetase [Legionella drancourtii LLAP12] gi|254353677|gb|EET12391.1| glutamine dependent NAD+ synthetase [Legionella drancourtii LLAP12] Length = 525 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 229/550 (41%), Positives = 313/550 (56%), Gaps = 27/550 (4%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSS 68 +AQ NP VGD+ N A+ ++ + DLI+F EL ++GYPPEDL+F+K F QA S Sbjct: 1 MAQTNPTVGDLTANRAQIIEIIKK-KQADHDLIIFPELALTGYPPEDLLFRKEFHQAVSE 59 Query: 69 AIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRT 128 + +++ T+D +++G P DQ+ NS+ IL G II K NLPNY F E R Sbjct: 60 NLKQIQAVTND--CYVLIGHPSVDQKNCYNSLSILHDGKIITQYQKQNLPNYEVFDETRY 117 Query: 129 FISGY-SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKR 187 F G + + ++ +GI ICED W+ + L GA + S+NASP+ +K +KR Sbjct: 118 FTPGPKNPCLLNIKNYSIGICICEDAWR-LGPVEDLITNGASIIVSINASPFDISKYQKR 176 Query: 188 HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY 247 ++ H + +IYVNQ+GGQDEL+FDG S D Q + + F E E Sbjct: 177 ETLLKSHAQH-GVAVIYVNQIGGQDELLFDGQSLAMDHQGTICARAPAFKEDLCTIEIE- 234 Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + L +E+ Y A V +DYV KN+F V++GLSGGIDSAL Sbjct: 235 ----------GKKLSGPTAPLLSKEQLLYEALVCGTKDYVNKNHFPGVLLGLSGGIDSAL 284 Query: 308 CAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A+AVDALG E V +++P +YT+ S EDA + LG + +L I N + + Sbjct: 285 TLAVAVDALGAERVHAVLMPSRYTADISYEDAIKELEILGVSHSLLSIEPAFNTLMTTLE 344 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 P ENIQ+RIRG +LMA+SN S M+LTTSNKSE +VGY TLYGDM GGF Sbjct: 345 PVFSGLPMDTTEENIQARIRGLLLMAMSNKSGNMVLTTSNKSESAVGYATLYGDMCGGFG 404 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYP 487 LKD+ KT+V+ LA +RNS L EVIP ++ ++PSAELR +QTDQ+SLP Y Sbjct: 405 ILKDVLKTEVYALARYRNS---------LAEVIPERVITRAPSAELRENQTDQDSLPEYE 455 Query: 488 ILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRD 546 +LD II +E S Q + E V V L+ +EYKRRQA G KI+ +FG+D Sbjct: 456 VLDAIIVAYMEKNLSPAEIIQQGFKAEDVTRVIQLIKRNEYKRRQAAPGIKISPMAFGKD 515 Query: 547 RLYPISNKFR 556 YPI+N F+ Sbjct: 516 WRYPITNGFK 525 >gi|71275844|ref|ZP_00652128.1| NAD+ synthase [Xylella fastidiosa Dixon] gi|71899340|ref|ZP_00681500.1| NAD+ synthase [Xylella fastidiosa Ann-1] gi|71163422|gb|EAO13140.1| NAD+ synthase [Xylella fastidiosa Dixon] gi|71730854|gb|EAO32925.1| NAD+ synthase [Xylella fastidiosa Ann-1] Length = 545 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 217/560 (38%), Positives = 308/560 (55%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N+ + E+A G D+++F EL +SGYPPEDL+ + Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNVERIIALIEQARDEHGADVVMFPELALSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C AI+ + + TH VVG+P+ V N +L G + K LPN Sbjct: 61 PGFLAHCQVAIERIAAATH--SIVAVVGWPQSAGSVVYNVASVLCDGQVEQTYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y F E+R F S + + +G+LICED+W S GAE + NAS Sbjct: 119 YGVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLW-FSEPLADTVCGGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ FS Sbjct: 178 PYERGKHAQRDVLLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAAAFS 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + D S+ ++ + + + + A V ++DY +KN F KV + Sbjct: 238 DQWLVV----DYMRSERRFVPLQWVAESEVSINALV--WRAVVRGVQDYCRKNGFSKVWV 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + + + I Sbjct: 292 GLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVRLETVAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY T Sbjct: 352 VFEGLLAALGPLFAGMSPDATEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKD+YK+QVF+LA WRN+ IPP ++ + PSAELR Q Sbjct: 412 IYGDMCGGYAPLKDIYKSQVFELAQWRNTVSD-------VLAIPPGVIHRPPSAELRAQQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ V+ E+S + Y V YV +L+ +E+KR QA G Sbjct: 465 TDQDSLPPYEVLDGILSLYVDQEQSREDIIAAGYAAGVVDYVLNLVRINEWKRHQAAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPISN +R Sbjct: 525 KVSQRAFGRERRYPISNAYR 544 >gi|124267300|ref|YP_001021304.1| NH(3)-dependent NAD(+) synthetase [Methylibium petroleiphilum PM1] gi|124260075|gb|ABM95069.1| NH(3)-dependent NAD(+) synthetase [Methylibium petroleiphilum PM1] Length = 559 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 226/568 (39%), Positives = 322/568 (56%), Gaps = 36/568 (6%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA+ Q N VGD+AGN + + +A QG L++ EL ++GYPPEDL+ + +F++AC Sbjct: 9 IALVQFNATVGDLAGNAQRIAQWSRQAYSQGARLVITPELSLTGYPPEDLLLRPAFMRAC 68 Query: 67 SSAIDTLKSDTHDG-GAGIVVGFPRQDQ------------EGVLNSVVILDAGNIIAVRD 113 A+ + D +VVG P+ + +N+ +L G ++A Sbjct: 69 DEALAACAASLADLPDLQVVVGHPQAIDALGDLRTRSLAVQRRVNAASVLAGGRVMATYA 128 Query: 114 KINLPNYSEFHEKRTFISG----YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K LPNY F E+R F+SG + + +R+G+LICED W + K GA+ Sbjct: 129 KRELPNYQVFDERRYFVSGRDAGFGPLVVETGGLRVGLLICEDAWFD-EPAAAAKAAGAQ 187 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L +NASP++ K ++R E + + LP++Y + VGGQDE++FDGASF D + + Sbjct: 188 VLAVINASPFHLGKAEEREERMARRAVESGLPLLYSHLVGGQDEVVFDGASFAVDAKGAV 247 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F E+ + + D + S P E + A V +RDY+ K Sbjct: 248 RARAASFVEEVLAVQVNADGAV---------SGPLAPAPSLE-SQAWAALVTGVRDYLGK 297 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 N F IIGLSGGIDSAL A+AVDALG + V+ +M+P YT+ S DA A+ LG + Sbjct: 298 NGFPGAIIGLSGGIDSALVLAVAVDALGADRVRAVMMPSPYTADISWIDARDMARRLGVQ 357 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 YD + I + F S ++ ENIQ+RIRG +LMALSN S ++LTT NKS Sbjct: 358 YDEISIVPMFESFKSALALEFAGLAEDATEENIQARIRGTLLMALSNKSGRIVLTTGNKS 417 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++ GY TLYGDM+GGF +KD+ KT V++LA+WRN+ G VIP I+ + P Sbjct: 418 EMATGYCTLYGDMAGGFAVIKDVAKTLVYRLAAWRNAQG-------AAPVIPERIITRPP 470 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYK 528 SAELRP QTDQ+SLPPY +LD I+ R +E+++ Y V V L+ +EYK Sbjct: 471 SAELRPDQTDQDSLPPYDVLDAILARYMEDDQGVEEIVAAGYARTDVERVTRLIKINEYK 530 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 RRQAPVG +IT +SFG+D YPI++KFR Sbjct: 531 RRQAPVGIRITHRSFGKDWRYPITSKFR 558 >gi|283783349|ref|YP_003374103.1| NAD+ synthetase [Gardnerella vaginalis 409-05] gi|298252710|ref|ZP_06976504.1| NAD synthase [Gardnerella vaginalis 5-1] gi|283441963|gb|ADB14429.1| NAD+ synthetase [Gardnerella vaginalis 409-05] gi|297533074|gb|EFH71958.1| NAD synthase [Gardnerella vaginalis 5-1] Length = 570 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 216/584 (36%), Positives = 313/584 (53%), Gaps = 42/584 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQ++ VG+I N+ K + A + G +++F E+ ++GYP EDL + + Sbjct: 1 MSFLRLALAQIDTCVGNIDSNVEKVLKYAARAKQSGARMVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKIN 116 F A D L + + G G +VVG D+ N +++L G + DK Sbjct: 61 FRTTAQKAADLLATKLAEEGLGELYVVVGTVGFDESAGKPRNRLLVLHEGKSVLQYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F SG + + +RLG ICEDIW++ L K G + L ++N Sbjct: 121 LPNYGVFDEFRIFSSGNKCELLEVDGMRLGFAICEDIWQDGGPVARLAKLGIDALITMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R + + V+ P++YVNQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTHVRLSLAQKRAVEVNAPVVYVNQVGGQDDLVFDGGSFVVDADGTLLERSAMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E ++ N + S++ L +E Y ACV+ LRDY++KN F V Sbjct: 241 DEDLSFVDFD--------NSLKKQKVSSIAPKLDADEEVYCACVVGLRDYMRKNGFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL A +A DA G NV I +P Y+S S +DA A+ +G YDV PI Sbjct: 293 LGLSGGIDSALVATMAADACGGANVYGISMPSMYSSDGSKDDARDLAERIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F S +S G+ AEN+Q+R+RG I+MA SN + L T NKSE++ GY Sbjct: 353 PLFKAFQSQLS------LEGVAAENLQARVRGVIVMAYSNSRGVLALATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----------GLGPLTEV------ 459 T+YGD GG+ P+KDL+KT+V+ L+ WRN TEV Sbjct: 407 TIYGDAVGGYAPIKDLFKTRVWALSRWRNRAANAGVGIGMLPIVGYEDSEQTEVTKAKAP 466 Query: 460 -----IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDE 513 IP + + K PSAELRP Q D +SLP Y +LD +++ +E + + +++ Sbjct: 467 QDGVLIPVNSIIKPPSAELRPGQKDSDSLPEYDLLDRVLEAHIELAHGRADLLEDGFDEH 526 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 TV V L+ +E+KRRQ P+G K++A +FGRDR P++ FR+ Sbjct: 527 TVDTVMRLVDRAEWKRRQYPLGPKVSAIAFGRDRRMPVTTAFRE 570 >gi|209516024|ref|ZP_03264884.1| NAD+ synthetase [Burkholderia sp. H160] gi|209503484|gb|EEA03480.1| NAD+ synthetase [Burkholderia sp. H160] Length = 566 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 217/582 (37%), Positives = 325/582 (55%), Gaps = 39/582 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQINVTVGDFAGNVAKIVAAARAAHSDGAKLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG---------------------VLNS 99 F A ++A+ L + G ++VG P +D N+ Sbjct: 60 FYTASAAALADLAAQLKPFTGLHVIVGHPLRDGSDNLANGHGNANAPIERGVPPVDTFNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G + K +LPN F EKR F S ++ G++ICED W +++ Sbjct: 120 ASLIVDGEVKGTYRKQDLPNTEVFDEKRYFASDPQPFVFELDGVKYGVVICEDAW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I +P++YVN VGGQDEL+FDG Sbjct: 179 AQMAKAAGAQVLLIPNGSPYHLNKEAVRFDILRARIRETGIPMVYVNMVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF D Q +L ++ F E + E+ + + E Y A Sbjct: 239 SFVLDAQGELVAKLAQFEEATAIVEFD----------NGTPLPAAIAPEQSIEAQVYAAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V+ +RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S DA Sbjct: 289 VMGVRDYIGKNGFPGALIGLSGGVDSALVLAVACDALGADKVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A A+ +G +YD + I + + F +++ ENIQ+RIRG +LMALSN Sbjct: 349 AEMARRVGVRYDEIAIAPMFDAFRGSLAEEFAGRAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN + +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNLATTFAT----RDV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLP Y +LD I++ +E + S Y + V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPEYEVLDAIMRMYMEEDRSLAEIIAAGYAVDDVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 525 TRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPVE 566 >gi|302534133|ref|ZP_07286475.1| NH(3)-dependent NAD(+) synthetase [Streptomyces sp. C] gi|302443028|gb|EFL14844.1| NH(3)-dependent NAD(+) synthetase [Streptomyces sp. C] Length = 584 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 211/592 (35%), Positives = 310/592 (52%), Gaps = 44/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VG+IA N + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSQVGNIAANADSVVHWTRHSAEQGAHLVAFPEMTLTGYPVEDLALRAS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL----------NSVVILDAGNI 108 F+ A +A+ L D G G +VVG+ + + N+ +L G + Sbjct: 61 FVDASRTALTALARRLADEGLGGLPVVVGYLDRSERATPRLGLPAGSPENAAAVLYGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W+ + GA Sbjct: 121 VLRFAKHHLPNYGVFDEFRYFVPGDTQPVVRVHGVDVALAICEDLWQEGGRVPATRSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY NK R E+V + + YV +GGQDEL+FDG S D + Sbjct: 181 GLLISINASPYERNKDDVRLELVRKRAQEAGCTLAYVAMIGGQDELVFDGDSIVVDAAGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIPL------- 269 + + FSE + + D L + + Y P+ Sbjct: 241 VVVRAPQFSEGCVLVDLDLPAARPDAPEGVVDDGLRIDRVILSEEPLEAYEPVVTGGYAE 300 Query: 270 --QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 ++E Y+A V+ LR YV KN F V+IGLSGGIDSAL AA+A DA+G +NV I +P Sbjct: 301 RLDDDEEVYDALVVGLRAYVGKNGFRSVLIGLSGGIDSALVAAVACDAVGAQNVYGIAMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A G + +PI + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSEHSEGDAADLAARTGLNFRTVPIAPMFDAYMGSLG------LTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA +RN Sbjct: 415 GTLLMAVSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKSDVFRLARYRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP YP+LD I+ R V+ ++ Sbjct: 475 AEERGETP---PIPENSIVKPPSAELRPGQVDTDSLPDYPVLDAILARYVDRDQGLEEIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 ++ E V ++ +EYKRRQ P GTKI+AK FG+DR PI+N +R+ Sbjct: 532 AAGFDRELVAKTLRMVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNGWRER 583 >gi|209525771|ref|ZP_03274307.1| NAD+ synthetase [Arthrospira maxima CS-328] gi|209493744|gb|EDZ94063.1| NAD+ synthetase [Arthrospira maxima CS-328] Length = 565 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 213/574 (37%), Positives = 311/574 (54%), Gaps = 36/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP VGD+ GN A + A + L++ EL + GYPP DL+ + SFI Sbjct: 1 MKIAIAQINPTVGDLTGNAQLILEAAQSAINEDASLLITPELALIGYPPRDLLIRPSFIN 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG--FP-----RQDQEGVLNSVVILDAGNIIAVRDKINL 117 A ++ L ++VG FP + + N+ +L G I V K L Sbjct: 61 AAQQQLEKLAQQLP-VELAVLVGTVFPNPRASELGGKPLFNTAALLMGGEIKQVFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR------DIRLGILICEDIWKNSN----------ICK 161 P Y F E R F ++D ++F+ +++G+ ICED+W + + K Sbjct: 120 PTYDVFDEHRYFEPAPASDVLIFKKPRSEEIVKIGVTICEDLWNDEDFWGHRNYPCDPMK 179 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + +++ +L+ SPY K + R ++T +PIIY NQVG D+LIFDG+S Sbjct: 180 DLSDRHVDWVVNLSGSPYRAGKQQLRKAMLTHSARRYAIPIIYTNQVGANDDLIFDGSSL 239 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL 281 +G ++ + F + EW + ++ D + E+E + A VL Sbjct: 240 VINGGGEVVKSLAPFQTDFQIIEWDSNSSTFVGESVNSDDTQLL----DEDEEIWRALVL 295 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 +RDY +K F KV+IGLSGGIDS+L AAIA +ALG + V +++P Y+S SLEDA Sbjct: 296 GVRDYTRKCGFSKVVIGLSGGIDSSLVAAIATEALGSQQVLGVLMPSPYSSEHSLEDAFD 355 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 A LG LPI ++N F + + GI EN+QSRIRG +LMA+SN + Sbjct: 356 LANNLGISTKTLPIESVMNAFDTTLYDLFAGTQFGIAEENMQSRIRGTLLMAISNKFGHL 415 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LL+T NKSEI+VGY TLYGDM+GG + D+ KT+V+ + W N E+IP Sbjct: 416 LLSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTRVYSICKWLNESRGR-------EIIP 468 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEH 520 ++L K SAEL+P Q D +SLPPY ILDDI+ R++E ES ++ +TV + Sbjct: 469 NNVLIKPASAELKPGQFDSDSLPPYHILDDILYRLIEKHESVATIIAAGHDCQTVERMVK 528 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 L+ G+E+KRRQAP G KI+ ++FG PI+ Sbjct: 529 LVMGAEFKRRQAPPGLKISDRAFGTGWRMPIARG 562 >gi|242280331|ref|YP_002992460.1| NAD+ synthetase [Desulfovibrio salexigens DSM 2638] gi|242123225|gb|ACS80921.1| NAD+ synthetase [Desulfovibrio salexigens DSM 2638] Length = 549 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 213/566 (37%), Positives = 313/566 (55%), Gaps = 34/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ QLN VGD+ GN+ +A ++G L L +EL ++GYPP DL+ F+ Sbjct: 1 MKIALLQLNLTVGDLEGNVELILDGVRKAAKRGARLCLTSELALTGYPPRDLLLNADFVC 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD---QEGVLNSVVILDAGNIIAVRDKINLPNYS 121 C A+ + +G A + G + N+ +++ G + V K LP Y Sbjct: 61 RCREAVSEISRRMPEGMALLAGGVDLNHEGIGNPLRNAAWLIEHGAVPKVFYKWLLPTYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEFL 171 F E+R F + + F +++G+ ICED+W + SN + + L Sbjct: 121 VFDEQRYFEPAENINFFEFDGLKIGVTICEDVWNDRENNNGRRYGSNPIPQIMDMNPDVL 180 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +L+ASP+ K + R +++ S +P+ Y NQVGG D+L+FDG S F+ L Sbjct: 181 VNLSASPFSIGKQRTREKLLGDIASKYKVPVFYANQVGGNDDLVFDGRSCAFNTDGDLVA 240 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + F E + E S DD EE + A VL LRDY+ K Sbjct: 241 RGHGFVEDVVIVESD----CSAGRIEEDD--------FCEEAEAWQAMVLGLRDYLGKTG 288 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV++GLSGGIDSAL AA+A +ALG ENV +++P Y+S S++D+ K +G Sbjct: 289 FSKVVLGLSGGIDSALTAAVAAEALGAENVTGVLMPSPYSSKGSVDDSLDLVKNIGINCT 348 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 +PI L+ F ++ + P+ + ENIQSRIRGN++MA+SN A+L+TT NKSE+ Sbjct: 349 TIPIDKLMGQFEEALAPTFEGLPANVTEENIQSRIRGNLVMAISNKMGALLVTTGNKSEL 408 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM+GG + DLYKT VF++ W N G E+IP +I+EK PSA Sbjct: 409 AVGYCTIYGDMAGGLAVISDLYKTLVFRVCRWLNEQGR-------GEIIPVAIIEKPPSA 461 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENE--ESFINNDQEYNDETVRYVEHLLYGSEYKR 529 ELRP Q D++SLPPY +LD II+ VE ES I + ++ ETV++V L+ SE+KR Sbjct: 462 ELRPGQKDEDSLPPYDVLDRIIELRVEGHKAESEIIAETGFDVETVQHVLRLIRISEFKR 521 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKF 555 +QA G KIT+++FG PI+ +F Sbjct: 522 KQAAPGLKITSRAFGTGWRMPIACRF 547 >gi|297194731|ref|ZP_06912129.1| NH(3)-dependent NAD(+) synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|297152418|gb|EDY66850.2| NH(3)-dependent NAD(+) synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 585 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 206/594 (34%), Positives = 308/594 (51%), Gaps = 44/594 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLAGNAEAIVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGV----------LNSVVILDAGNI 108 F++A + + L + G G ++VG+ + + G N+ +L G + Sbjct: 61 FVEASRATLRALAARLDSEGFGELPVIVGYLDRSETGRPRYGQPAGSPRNAAAVLHRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + I + + + ICED+W++ + A Sbjct: 121 ALSFAKHHLPNYGVFDEFRYFVPGDTMPVIRVHGVDVALAICEDLWQDGGRVPAARSAKA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R E+V + Y+ +GGQDEL+FDG S + Sbjct: 181 GLLISINASPYEREKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVGADGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------STMYIPLQE--------- 271 + + F+E + + + + D S +P E Sbjct: 241 VVARAPQFAEGSVVLDLELPAAAADAPEGVVDDGLRIDRVVLSQEPLPACEAELTGGYAD 300 Query: 272 ----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 +E Y+A V+ LR Y KN F V+IGLSGGIDSAL AAIA DALG +NV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + +PI + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTVPIEPMFDAYMGSLG------LTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTMLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTTVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP Y +LD +++ V+ ++ Sbjct: 475 AAERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYDVLDRLLELYVDRDQGKDAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 +++ V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ S Sbjct: 532 AAGFDEALVTKTLRMVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWREATS 585 >gi|81298916|ref|YP_399124.1| NAD synthetase [Synechococcus elongatus PCC 7942] gi|81167797|gb|ABB56137.1| NH(3)-dependent NAD(+) synthetase [Synechococcus elongatus PCC 7942] Length = 574 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 206/577 (35%), Positives = 306/577 (53%), Gaps = 30/577 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQLNP +GD+ GN EA + G L+L EL + GYPP DL+ F+ Sbjct: 1 MKLAIAQLNPTIGDLTGNTQAIVAVAREAQQAGARLLLTPELSLCGYPPRDLLLLPDFLA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 A + ++ L + ++VG P + + + N V+++ G I K L Sbjct: 61 AIADQLEQLCREAPK-DIALLVGAPLPNPQAGIEGGKPLFNGAVLIENGEIRDRFYKQLL 119 Query: 118 PNYSEFHEKRTFISGYSN-DPIVFRD--IRLGILICEDIWKNSN----------ICKHLK 164 P Y F E R F SG + +R+G+ ICED+W L Sbjct: 120 PTYDVFDEDRYFQSGQGGWFDLQAEGETLRVGVSICEDLWNEPEFWGERRYESDPIAALV 179 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + L +L+ASPY K K R ++ +P++Y NQVGG D+LIFDG SF + Sbjct: 180 ADQIDLLVNLSASPYCFGKPKLREALLRHTCRRYQIPLLYANQVGGNDDLIFDGNSFVLN 239 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 ++ + KH + + +W QQ+ + ++ ++ Q+ + VL LR Sbjct: 240 AAGEVLQRGKHCQAELLIVDW---QQIQLAPATTAIASPSLTESQQDLAELWEVLVLGLR 296 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +++GLSGGIDSAL AA+A A+ ENV I++P Y+S S+ DA A A+ Sbjct: 297 DYTRKCGFKSIVLGLSGGIDSALVAALAAAAIEAENVLAILMPSPYSSDHSITDAIALAE 356 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L +++ + I L+ F +S + ENIQSRIRG +LMA +N ++L+T Sbjct: 357 NLQIRHETIAIAPLMTAFEHSLSDLFAGRSPDVTEENIQSRIRGTLLMAAANKLGSLLVT 416 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL-----GPLTEV 459 T NKSE++VGY TLYGDM+GG + DL KT V+QL W NS TE+ Sbjct: 417 TGNKSELAVGYCTLYGDMNGGLAAIADLPKTWVYQLCHWLNSEAAAEVRSQHFPQAPTEI 476 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP SIL K+PSAELRP Q DQ+SLP Y +LDDI+ R++E +S ++ E + V Sbjct: 477 IPDSILTKAPSAELRPDQVDQDSLPDYAVLDDILVRLIEKHQSRKEILAAGHSSEVLDKV 536 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QA G K++ ++FG PI+ ++ Sbjct: 537 LGLVRRAEFKRKQAAPGLKVSDRAFGTGWRMPIACRW 573 >gi|71897931|ref|ZP_00680136.1| NAD+ synthase [Xylella fastidiosa Ann-1] gi|71732175|gb|EAO34230.1| NAD+ synthase [Xylella fastidiosa Ann-1] Length = 545 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 218/560 (38%), Positives = 308/560 (55%), Gaps = 20/560 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEAN-RQGMDLILFTELFISGYPPEDLVFK 59 M + L+IA+AQ + VG +A N + E+A G D+++F EL +SGYPPEDL+ + Sbjct: 1 MSEFLRIAMAQFDFPVGAVAQNAERITALIEQARDEHGADVVMFPELALSGYPPEDLLLR 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ C AI+ + + TH G VVG+P+ V N +L G + K LPN Sbjct: 61 PGFLAHCQVAIERIAAATH--GIVAVVGWPQSAGSVVYNVASVLCDGQVEQTYRKRELPN 118 Query: 120 YSEFHEKRTFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 Y+ F E+R F S + + +G+LICED+W S GAE + NAS Sbjct: 119 YAVFDERRYFEVDPNGSRCVFKVKGVPVGVLICEDLW-FSEPLADTVCGGAELVLVPNAS 177 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K +R ++ + I Y+N VGGQD L+FDGAS DG ++ FS Sbjct: 178 PYERGKHAQRDALLAERARETGAAIAYLNVVGGQDALVFDGASVVVDGHGRVHPAAAAFS 237 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 +Q + D S+ ++ + + + + A V ++DY +KN F KV + Sbjct: 238 DQWLVV----DYMRSERRFVPLQWVAESEVSINALV--WRAVVRGVQDYCRKNGFSKVWV 291 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIAVDALG + V + LP +YT+ S + AA +LG + + + I Sbjct: 292 GLSGGIDSALVLAIAVDALGADQVTAVRLPSRYTAELSNDLAAEQCHSLGVRLETVAIEP 351 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + + EN+QSR RG ILMAL+N +LLTT NKSE +VGY T Sbjct: 352 VFEGLLAALGPLFAGMAPDAAEENLQSRSRGVILMALANKFGGLLLTTGNKSEYAVGYAT 411 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQ 477 +YGDM GG+ PLKD+YK+QVF+LA WRN IPP ++ + PSAELR Q Sbjct: 412 IYGDMCGGYAPLKDIYKSQVFELAQWRNRVSD-------VLAIPPGVIHRPPSAELRAQQ 464 Query: 478 TDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGT 536 TDQ+SLPPY +LD I+ V+ ++S + Y V YV +L+ SE+KR QA G Sbjct: 465 TDQDSLPPYEVLDGILSLYVDQDQSREDIIAAGYAAGVVDYVLNLVRISEWKRHQAAPGP 524 Query: 537 KITAKSFGRDRLYPISNKFR 556 K++ ++FGR+R YPISN +R Sbjct: 525 KVSQRAFGRERRYPISNAYR 544 >gi|295675880|ref|YP_003604404.1| NAD+ synthetase [Burkholderia sp. CCGE1002] gi|295435723|gb|ADG14893.1| NAD+ synthetase [Burkholderia sp. CCGE1002] Length = 570 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 218/586 (37%), Positives = 325/586 (55%), Gaps = 43/586 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQINVTVGDFAGNVAKIVAAARAAHSDGAKLLVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG------------------------- 95 F A ++A+ L + G ++VG P +D Sbjct: 60 FYTASAAALADLAAQLKPFTGLHVIVGHPLRDGSDNLAHNAANGHGNANAPIERGVPPVD 119 Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK 155 N+ ++ G + K +LPN F EKR F S +R G++ICED W Sbjct: 120 TFNAASLIVDGEVKGTYRKQDLPNTEVFDEKRYFASDPQPFVFELDGLRYGVVICEDAW- 178 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 +++ + K GA+ L N SPY+ NK R +I+ +I +P++YVN VGGQDEL+ Sbjct: 179 HASAAQMAKAAGAQVLLIPNGSPYHLNKEAVRFDILRARIRETGIPMVYVNMVGGQDELV 238 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD 275 FDG SF D Q L ++ F E + E+ + + E Sbjct: 239 FDGGSFVLDAQGALVAKLAQFEEATAIVEFD----------DGKPLPAAIAPEQSIEAQV 288 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A V+ +RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S Sbjct: 289 YAALVMGVRDYIGKNGFPGALIGLSGGVDSALVLAVACDALGADKVRAVMMPSRYTADIS 348 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 DAA A+ +G +YD + I + + F +++ ENIQ+RIRG +LMALS Sbjct: 349 TTDAAEMARRVGVRYDEIAIAPMFDAFRGSLAEEFAGRAEDATEENIQARIRGTLLMALS 408 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ + Sbjct: 409 NKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAATTFAT--- 465 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDET 514 +VIP IL ++PSAELR +QTDQ+SLP Y +LD I++ +E + S Y + Sbjct: 466 -RDVIPERILTRAPSAELRENQTDQDSLPEYEVLDAIMRMYMEEDRSLAEIIAAGYRVDD 524 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 V+ V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 525 VKRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPVE 570 >gi|326560148|gb|EGE10537.1| NAD+ synthetase [Moraxella catarrhalis 103P14B1] Length = 517 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 214/526 (40%), Positives = 303/526 (57%), Gaps = 19/526 (3%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 +A +G D+++F EL + GYPPEDL+ + + + A+ L G +++G+P Sbjct: 7 DAKARGADIVIFPELALVGYPPEDLLLRPTLGERVREAMAKLAEI---EGIVVILGYPHI 63 Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICE 151 D G NS IL G+ K LPNY F E+R F G + ++ + +G+LICE Sbjct: 64 DHHGTFNSAAILQDGSQKGFYHKQCLPNYGIFDEQRYFQKGLNQVLFDYKGVTIGLLICE 123 Query: 152 DIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ 211 DIW + + LK+ GA+ + +NASP+ K R ++T S HLPIIYVN VG Q Sbjct: 124 DIW-HDEPIQALKQAGADLVIVINASPFEIGKQTARKSLLTRHSSTHHLPIIYVNTVGAQ 182 Query: 212 DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE 271 D+++FDG S ++A + F Q M + + + D+ + + L E Sbjct: 183 DDIVFDGGSLITQSDGRVAHEGVRFLNQLLMARFDTQNK-------TFDTQAKAPLVLSE 235 Query: 272 EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT 331 E Y A V+ LRDYV ++ F VI+GLSGGIDSAL IAVDALG + V +M+PY+YT Sbjct: 236 ESEMYQALVVGLRDYVNRSGFKGVIVGLSGGIDSALTLCIAVDALGCDRVYAVMMPYEYT 295 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNIL 391 + SLEDA A A L Y V PIHD V S ++ L + EN+Q+R RG IL Sbjct: 296 AQISLEDAEAQAARLNVSYTVCPIHDAVAGLRSALAPLLANSEPDVTEENLQARARGTIL 355 Query: 392 MALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 MALSN M+++T NKSE +VGY TLYGDM GGF+ LKD+YKT V++LA++RN Sbjct: 356 MALSNKFGHMVISTGNKSENAVGYSTLYGDMVGGFDVLKDVYKTDVYRLANYRNRL---- 411 Query: 452 GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEY 510 VIP ++ + PSAELRP+Q DQ+SL Y LD I+K ++++ + + Sbjct: 412 ---EDNPVIPERVITRPPSAELRPNQKDQDSLGDYETLDSILKMYIDDDLGYKAIVAAGF 468 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +TV + ++ +EYKRRQ +GTKIT KSFGR+R YP+ N + Sbjct: 469 EPKTVEKILSMVDRAEYKRRQGAIGTKITKKSFGRERRYPLVNGWS 514 >gi|320352986|ref|YP_004194325.1| NH(3)-dependent NAD(+) synthetase [Desulfobulbus propionicus DSM 2032] gi|320121488|gb|ADW17034.1| NH(3)-dependent NAD(+) synthetase [Desulfobulbus propionicus DSM 2032] Length = 541 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 203/564 (35%), Positives = 299/564 (53%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q NP++G N+ + +A + DL++F EL + GYPP+DL+ + +F+ Sbjct: 1 MKIALIQTNPIIGAFERNLRQVLHWIGKARQARCDLVVFPELTLCGYPPQDLLERPAFLD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNYS 121 A+ L G +VG P + Q + NS +L+ I K LP Y Sbjct: 61 GHDRALVDLVKQLA--GISCIVGVPERRQGPGKPLYNSAYVLERDKIAVRARKQLLPTYD 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG-------AEFLFSL 174 F E R F G ++ + + G+ ICEDIW NS I + + L ++ Sbjct: 119 VFDETRYFEPGTTSTVFPCKGVHCGLTICEDIWWNSEIYPTDPLKDLVIGPIVPDCLINI 178 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 +ASPY++ KL++R ++ T +LP++YVNQVGGQD LIFDG S + L Sbjct: 179 SASPYHYGKLEERQQVFTRLCRDNNLPLLYVNQVGGQDGLIFDGHSMVMTPRGTLRAVAA 238 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E + + D +P A VL +RDY+ K F + Sbjct: 239 GFGEDMLVVD------------SEDWDRDGGQLPADSVADVEQALVLGVRDYLHKTGFRR 286 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++GLSGGIDSA+ A IA ALG ENV + +P YTS S++DA A LGC ++++ Sbjct: 287 AVLGLSGGIDSAVTAVIACRALGPENVLCVAMPSPYTSQASIDDARQLAANLGCDFEIIA 346 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I L+ + + ++ +NIQ+RIRGN+LMALSN K +LLTT NKSE++VG Sbjct: 347 ISALMETYRASLAPLFTGLAEDATEQNIQARIRGNLLMALSNKFKRLLLTTGNKSEMAVG 406 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDMSGG + D+ K V++LA N E+IP I+ + P+AEL+ Sbjct: 407 YCTLYGDMSGGLAVIADVPKIMVYELAHLLNRE---------RELIPERIITRPPTAELK 457 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAP 533 P Q DQ+ LPPY +LD ++K +E +S Y+ + VR + + +EYKR+QAP Sbjct: 458 PDQCDQDDLPPYEVLDGVLKAYLEEHKSIEAIVANGYDAQMVRDIVRRIKLNEYKRKQAP 517 Query: 534 VGTKITAKSFGRDRLYPISNKFRD 557 +G K+T K+FG R YP+ F + Sbjct: 518 LGIKVTTKAFGPGRRYPLVQGFVE 541 >gi|297559901|ref|YP_003678875.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844349|gb|ADH66369.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 590 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 208/592 (35%), Positives = 307/592 (51%), Gaps = 42/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ+NP GD+ GN++ + A +G L++ E+ ++GYP EDL + S Sbjct: 1 MAQLRIALAQVNPTTGDLDGNLSLVVDSARRAAEEGAHLVVLPEMVVTGYPVEDLALRNS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVL--------NSVVILDAGNI 108 F+ A A L +D G G +VVG+ + + NSV +L G + Sbjct: 61 FVSASIKATRALAADLAREGLGELPVVVGYLSRREGPGARYGQPAGAPQNSVAVLHRGGV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + R + + + +CED+W+ + G Sbjct: 121 VLSSAKHHLPNYGVFDEFRNFVPGDTLSVVRVRGVDVALAVCEDLWQEGGPVTAARAAGV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L SLN SPY +K R E+ + V + YVN VGGQDEL+F+G S D + + Sbjct: 181 GLLVSLNGSPYERHKDDVRLELCQRRAREVGAALAYVNMVGGQDELVFEGDSLIVDSEGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQ---------------QLSQWNYMSDDSASTM-------- 265 L + F+E + + + ++ + +D A Sbjct: 241 LVARAPQFAETLLVADLDLPEAGPAPDGPGARVDGLRVMRHTVSADPVAPYPPRAATVTP 300 Query: 266 -YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTI 324 PL + Y A V LRDY KN F V++G+SGGIDSAL A IAVDALG + V + Sbjct: 301 RPDPLSDTGEVYRALVTGLRDYTVKNGFGSVLVGVSGGIDSALVATIAVDALGADRVHGV 360 Query: 325 MLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQS 384 ++P ++S S+ DA A+ G + I V F + +G+ AEN+Q+ Sbjct: 361 LMPSAHSSDHSVGDAEELARRQGFATRTIAIAPAVEAFTRSTGE-AGVPLTGLAAENLQA 419 Query: 385 RIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWR 444 R+RG +LMALSN ++L T NKSE + GY TLYGD GGF P+KD +KT V++LA WR Sbjct: 420 RVRGTLLMALSNEEGHLVLATGNKSEAATGYSTLYGDSVGGFAPIKDCWKTLVWELARWR 479 Query: 445 NSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFI 504 N + G P IP + + K PSAELRP Q D +SLP Y LD ++ V ++ Sbjct: 480 NEEAVRLGQTP---PIPENSISKPPSAELRPDQLDTDSLPDYTQLDAVLDAYVGTDKGEA 536 Query: 505 NND-QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 Y+ E VR V ++ +EYKRRQ+ GTKI+A++ RDR PI+N++ Sbjct: 537 ELVFAGYDPELVRRVIRMVDRAEYKRRQSAPGTKISARNLSRDRRVPITNRW 588 >gi|328952407|ref|YP_004369741.1| NAD+ synthetase [Desulfobacca acetoxidans DSM 11109] gi|328452731|gb|AEB08560.1| NAD+ synthetase [Desulfobacca acetoxidans DSM 11109] Length = 546 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 212/568 (37%), Positives = 305/568 (53%), Gaps = 39/568 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + I IAQL+ VVGDI GN A+A + EA DL++F EL+++ YPP DL+ K S I Sbjct: 1 MNITIAQLDAVVGDIDGNAARAVKVFSEAAGN-SDLVVFPELYLTAYPPRDLLEKHSLIN 59 Query: 65 ACSSAIDTLKSDTHDGG-AGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKINLPN 119 A++ L+ + G+++G P +G+ N+ +++ G I + K LP Sbjct: 60 RVQQAVEELREVSARHPETGLLIGAPVPTGLATGKGLYNAALLIYQGQI-NWQAKSLLPT 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAE 169 Y F E R F F+D LG+ ICED W N + L +QGA Sbjct: 119 YDVFDESRYFDPPALVRVFPFKDEILGVSICEDAWYEYDANARRLYLFNPIQELAQQGAT 178 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 +++ASP++ K + R ++ G +P I VNQVGG DELIFDG S D Q Sbjct: 179 IFINISASPFHCGKEEIRRRLIQGHCQAYQVPFILVNQVGGNDELIFDGRSMVLDAQGTP 238 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F E + + +Y P E + ++A +L L+DY++K Sbjct: 239 VAVLPAFEEAVVTVDTSVS------------GRAEIYQPAAEIASVHDALILGLKDYLRK 286 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F K ++GLSGGIDSA+ +A ALG ENV +++P Y+SP S+ D+ A LG K Sbjct: 287 CGFSKAVVGLSGGIDSAVTCYLARQALGLENVLGVIMPSLYSSPGSIADSERLADNLGVK 346 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 +PI + + S + + ENIQ+RIRGNILMA SN M+L+T NKS Sbjct: 347 TCTVPITPIYQAYLSSLPACFPVGDLDVALENIQARIRGNILMAFSNRLGYMVLSTGNKS 406 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDMSGG + D+ KT ++ LA + N E+IP IL K P Sbjct: 407 ELAVGYCTLYGDMSGGLAVISDVPKTMIYDLARYINRQ---------RELIPQEILTKPP 457 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYK 528 SAELRP+Q DQ++LPPY ILD I++ + + D+ ++ ETVR+V + +EYK Sbjct: 458 SAELRPNQRDQDTLPPYEILDQILEYYINEGWGYQEIVDRGFDPETVRWVIQAVDRNEYK 517 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 RRQA G K+T+K+FG R PI+ ++ Sbjct: 518 RRQAAPGLKVTSKAFGSGRRMPIAARYE 545 >gi|325916246|ref|ZP_08178527.1| DNA-directed RNA polymerase, subunit H [Xanthomonas vesicatoria ATCC 35937] gi|325537540|gb|EGD09255.1| DNA-directed RNA polymerase, subunit H [Xanthomonas vesicatoria ATCC 35937] Length = 538 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 216/551 (39%), Positives = 307/551 (55%), Gaps = 20/551 (3%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFIQACS 67 +AQ + VG +A N + A + D++LF EL ISGYPPEDL+ + F+ C Sbjct: 1 MAQFDFPVGAVAKNTDRIIEFIAMARDEFEADIVLFPELAISGYPPEDLLLRPGFLAHCE 60 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKR 127 A+ + T G V+G+P+ V N+ +L G I A K LPNY+ F E+R Sbjct: 61 EALARIAVSTR--GIVAVIGWPQSAGSVVYNAASVLRDGRIEATYRKRELPNYAVFDERR 118 Query: 128 TFI--SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 F N + +D+++G++ICED+W + + GAE + NASPY K Sbjct: 119 YFDVDPDGDNCVVTIKDVQVGVVICEDLW-FAEPLAKTVQAGAELVLVPNASPYERGKHA 177 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW 245 +R ++ + I Y+N VGGQD L+FDGAS DG + F +Q + ++ Sbjct: 178 QRDALLAERTRESGAAIAYLNVVGGQDALVFDGASVVADGDGTVHPAAAAFVDQWLVVDY 237 Query: 246 HYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++ DD +M + A + L+DY +KN F KV +GLSGGIDS Sbjct: 238 AAGERRFTPVVWVDDGDESMD------ALAWRAVMRGLQDYCRKNGFSKVWLGLSGGIDS 291 Query: 306 ALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 AL A+AVDALG +NV + LP +YT+ S + A +A+G K + + I + Sbjct: 292 ALVLAMAVDALGGDNVTAVRLPSRYTAGLSNDLAEEQCRAMGVKLETIAIEPAFEGLLAA 351 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + I EN+QSR RG ILMALSN +LLTT NKSE +VGY T+YGDM GG Sbjct: 352 LGPMFEGTQPDITEENLQSRSRGVILMALSNKFGGLLLTTGNKSEYAVGYATIYGDMCGG 411 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPP 485 + PLKDLYKT+VF LA WRN+ G VIPP+++ + PSAELR +QTDQ+SLPP Sbjct: 412 YAPLKDLYKTEVFGLAKWRNTVGG-------APVIPPAVISRPPSAELRDNQTDQDSLPP 464 Query: 486 YPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 Y +LD I+ R V+ E+S Y +TV +V L+ +E+KR QA G K++ ++FG Sbjct: 465 YDVLDGILYRYVDQEQSRDEIVAAGYAADTVEHVLRLVRINEWKRHQAAPGPKVSRRAFG 524 Query: 545 RDRLYPISNKF 555 R+R YPI+N + Sbjct: 525 RERRYPITNGY 535 >gi|222528265|ref|YP_002572147.1| NAD+ synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222455112|gb|ACM59374.1| NAD+ synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 540 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 207/565 (36%), Positives = 313/565 (55%), Gaps = 40/565 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K R + + + +++F EL I GYPP+DL+F+K FI+ Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIRIIK--SHRDAKILIFPELAICGYPPKDLLFQKDFIE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + + D ++VG P + + NS +I+ G I + K LP+Y Sbjct: 59 AVDKAIEEIAKEVEDSF--VIVGSPTKSHHVSKLFNSAIIIHQGKIEKMIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R FI + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFIPSPAREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELSQKGAKVFIN 176 Query: 174 LNASPYYHNKLKKRH-EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ + +++ + +P+IYVNQVGG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVLSSDGRLVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E ++ + D S A VL +RDY +K Sbjct: 237 AKEFEEDILEIELEKIDKMPEVEIHEDIS------------WIKKALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALG ENV + +P +Y+S SL+DA A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAAEALGPENVLGVAMPSRYSSEHSLKDAKQLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V I + + + + + + ENIQ+RIRGNILM +SN ++LTT NKSE+ Sbjct: 345 VYSIEEPFKAYLKMFNGS-EVAQQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSEL 403 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PSA Sbjct: 404 AVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPSA 454 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q DQ++LPPY +LD I+ +E ++S + Y + V V ++ +EYKR+ Sbjct: 455 ELRPNQKDQDTLPPYEVLDPILIAYIEEQKSIEEIVEMGYPKDLVLKVIKMVERAEYKRK 514 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QA G K+T+K+FG R PI ++ Sbjct: 515 QAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|284051648|ref|ZP_06381858.1| NAD synthetase [Arthrospira platensis str. Paraca] gi|291566403|dbj|BAI88675.1| probable glutamine-dependent NAD(+) synthetase [Arthrospira platensis NIES-39] Length = 565 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 209/574 (36%), Positives = 308/574 (53%), Gaps = 36/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQ+NP VGD+ GN A + A + L+L EL + GYPP DL+ + SFI Sbjct: 1 MKIAIAQINPTVGDLTGNAQLILEAAQWAINEDASLLLTPELALIGYPPRDLLIRPSFIN 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 A ++ L ++VG + + + N+ +L G I + K L Sbjct: 61 AAQQQLEKLAQQLP-VELAVLVGTVSPNHTASQLGGKPLFNTAALLMGGEIKQMFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFR------DIRLGILICEDIWKNS----------NICK 161 P Y F E R F ++D + +++G+ ICED+W + + K Sbjct: 120 PTYDVFDEHRYFEPAPTSDFFTLKKPRSEEIVKIGVSICEDLWNDEKFWAQRNYSCDPMK 179 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + +++ +L+ SPY K K R +++ +PIIY NQVG D+LIFDG S Sbjct: 180 DLSDRHVDWVVNLSGSPYRAGKQKLRKAMLSHSARRYGIPIIYNNQVGANDDLIFDGCSL 239 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVL 281 +G + + F + EW ++ ++ D + L ++ + A VL Sbjct: 240 VINGSGDVVKSLAAFQTDLQIIEWDFNTS----TFVGDSANIEDTQLLDSDDEIWQALVL 295 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAA 341 ++DY +K F KV+IGLSGGIDS+L AAIA +ALG + V +++P Y+S S+EDA Sbjct: 296 GVKDYTRKCGFSKVVIGLSGGIDSSLVAAIATEALGSQQVLGVLMPSPYSSEHSIEDALD 355 Query: 342 CAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAM 401 AK LG LPI ++N F S + GI EN+QSRIRG +LMA+SN + Sbjct: 356 LAKNLGISTQTLPIESVMNAFDSTLYNLFAGTQFGIAEENMQSRIRGTLLMAISNKFGHL 415 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LL+T NKSEI+VGY TLYGDM+GG + D+ KT+V+ + W N E+IP Sbjct: 416 LLSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTRVYSICKWLNESRGR-------EIIP 468 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYVEH 520 ++L K SAEL+P Q D +SLPPY ILDDI+ R++E ES + ++ +TV + Sbjct: 469 NNVLIKPASAELKPGQFDSDSLPPYHILDDILYRLIERHESVPTIIEAGHDCQTVERIVK 528 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 L+ G+E+KRRQAP G KI+ ++FG PI+ Sbjct: 529 LVMGAEFKRRQAPPGLKISDRAFGTGWRMPIARG 562 >gi|206895237|ref|YP_002247148.1| glutamine-dependent NAD(+) synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206737854|gb|ACI16932.1| glutamine-dependent NAD(+) synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 570 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 199/573 (34%), Positives = 306/573 (53%), Gaps = 34/573 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+NP VGD GN K A + ++++F EL ++GYPPEDL+F + F+Q Sbjct: 1 MKIGLAQINPKVGDFNGNKQKILHALDALKE--AEIVVFPELALTGYPPEDLLFNRDFLQ 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + I+ G P ++ + NS +++ G I+ K+ LPNY F Sbjct: 59 QSQQALREIARSVPRNQVVIL-GAPEKEGTDLYNSAFLINGGEIVGSHRKVLLPNYDVFD 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F +G + + F + +G+++CED+W + G L S+NASPY H KL Sbjct: 118 EMRYFKAGTTGTVLRFSNTSVGVVVCEDLWHPDGPAQWAAASGLSTLISINASPYEHKKL 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R ++ +++ I+YVN VGG+DEL+FDGAS L + F E + + Sbjct: 178 NNRLNLLKHLAKSLNVNIVYVNMVGGEDELLFDGASLVVLNNGDLICSLPFFEESLCVAD 237 Query: 245 WHYDQQLSQWNY----------------------MSDDSASTMYIPLQEEEADYNACVLS 282 + + S A + IP + Y V + Sbjct: 238 LPVTLKENVTAVLSSKLEEEETKVKTISIDAVVSDSTQVAQKVMIPEDDIANLYKGLVFA 297 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 + DYV K F VI+ +SGGIDSAL A ++VDALG + V+ I LP ++ P+S EDA Sbjct: 298 ISDYVHKQGFKGVIVPVSGGIDSALVATLSVDALGPDKVKLIYLPTRFNRPESFEDANLL 357 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A LGC V+ I ++ + ++ + Q++ + EN+Q+RIR NI LSN + ++ Sbjct: 358 ATNLGCTLSVIEIDHILQTYEEVLREKFQKQTFDVADENLQARIRANIAFYLSNMTGYLV 417 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 ++ SNKSE +VGYGT+YGDM+GGF P++D++KTQV+ LA +RNS VIP Sbjct: 418 MSCSNKSESAVGYGTIYGDMAGGFAPIRDVFKTQVYALARYRNSMKP---------VIPE 468 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLL 522 L + PSAEL +Q DQ+ LPPY +LD +++ V + F ++Y +E V ++ Sbjct: 469 RTLMREPSAELNVNQKDQDVLPPYEVLDPLLEDYVVDNLPFAELARKYGEEITSKVLRMV 528 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 SE+KR+Q PV K++ ++FG+ PI N F Sbjct: 529 KSSEFKRKQTPVAPKVSRRNFGKGWRMPIVNGF 561 >gi|302870926|ref|YP_003839562.1| NAD+ synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302573785|gb|ADL41576.1| NAD+ synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 540 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 208/565 (36%), Positives = 309/565 (54%), Gaps = 40/565 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + Q+NP+VGDI GN K + + +++F EL I GYPP+DL+F+K FI Sbjct: 1 MKILLCQINPIVGDIEGNTKKIIEIIK--SHADAKILIFPELSICGYPPKDLLFQKDFID 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + D ++VG P + + NS +IL G I V K LP+Y Sbjct: 59 AVEKAIEKIAKVVEDSF--VIVGSPTKSHHVSKLFNSAIILHQGKIEKVIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R FI + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFIPSLAREVVTIEGINFGISICEDIWNINNDENALYDINVLDELYQKGAKVFIN 176 Query: 174 LNASPYYHNKLKKRH-EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ + +++ + +P+IYVNQVGG DELIFDG S ++ + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVLSSSGKVVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E ++ + D A VL +RDY +K Sbjct: 237 TKEFEEDILEIELEKIDKMPEVEIHED------------ISWIKKALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALGKENV + +P +Y+S SL+DA A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLATEALGKENVLGVAMPSRYSSEHSLKDAKQLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V I + + + + + + ENIQ+RIRGNILM +SN ++LTT NKSE+ Sbjct: 345 VYSIEEPFKSYLKMFNGS-EVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSEL 403 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PSA Sbjct: 404 AVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPSA 454 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q DQ++LPPY +LD I+ +E ++S + Y + V V ++ +EYKR+ Sbjct: 455 ELRPNQKDQDTLPPYEVLDPILVAYIEEQKSIDEIVEMGYPKDLVLKVIKMVERAEYKRK 514 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QA G K+T+K+FG R PI ++ Sbjct: 515 QAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|296269233|ref|YP_003651865.1| NAD+ synthetase [Thermobispora bispora DSM 43833] gi|296092020|gb|ADG87972.1| NAD+ synthetase [Thermobispora bispora DSM 43833] Length = 584 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 217/596 (36%), Positives = 311/596 (52%), Gaps = 49/596 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ NPVVGDI GN A + L+ F E+F++GYPPEDLV + S Sbjct: 1 MAQLRIALAQTNPVVGDITGNAEMLVEWTRRAAERNAHLVAFPEMFLTGYPPEDLVLRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ---------EGVLNSVVILDAGNII 109 F++A +SA+ G G ++VG+ + L++ +L G +I Sbjct: 61 FVEASTSALTAAAERLAAEGLGDLPVIVGYLDRAGLTPRVGQPKGAPLDAAALLHRGRVI 120 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G I + + ICED+W++ + + GA Sbjct: 121 TKSAKHHLPNYGVFDEHRYFVRGDRLPIFRLHGIDVAVAICEDLWQDGGPVSVVGEVGAG 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L LN SPY NK R E+ + I YVN VGGQDEL+FDG S +L Sbjct: 181 LLVVLNGSPYEMNKDDVRLELCARRAREAGCTIAYVNLVGGQDELVFDGDSLIVSPTGEL 240 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS------------------------ASTM 265 + F+E+ + + + + + D+ + + Sbjct: 241 IARAAQFTEELLVADLDLPEGTGEPGEVRVDARDGTVITVERFTISAEPVAPYEPEPARI 300 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 L + Y A VL RDYV KN F VI+GLSGGIDSAL A IAVDALG V ++ Sbjct: 301 AERLDDLAEVYQALVLGTRDYVTKNGFRSVILGLSGGIDSALTATIAVDALGPSRVHAVL 360 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P +Y+S S+ DA + G +PI ++ F +S G+ AEN+Q+R Sbjct: 361 MPSRYSSEHSIIDAEELVRRQGINAVTVPITGIMEAFEKEIS------LHGLAAENLQAR 414 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 IRG ILM+LSN ++LTT NKSE++ GY TLYGD +GGF P+KD+ KT V++LA WRN Sbjct: 415 IRGMILMSLSNEHGHLVLTTGNKSELATGYSTLYGDSAGGFAPIKDVLKTMVWRLAEWRN 474 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 + P + + K PSAELRP Q D +SLPPY +LD +++ VE + Sbjct: 475 AQPPGPPPIP------ENSITKEPSAELRPGQRDTDSLPPYHVLDPLLRDYVERDMGRDE 528 Query: 506 -NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 ++ E V V ++ +EYKRRQ P G KIT K+FGRDR P++N++R+ ++ Sbjct: 529 LIAAGHDPELVTRVIRMVDRAEYKRRQYPPGPKITPKNFGRDRRLPLTNRWRERLA 584 >gi|170078390|ref|YP_001735028.1| NAD synthetase [Synechococcus sp. PCC 7002] gi|169886059|gb|ACA99772.1| NH(3)-dependent NAD(+) synthetase [Synechococcus sp. PCC 7002] Length = 568 Score = 564 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 215/580 (37%), Positives = 318/580 (54%), Gaps = 41/580 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTEL---FISGYPPEDLVFKKS 61 +KIAIAQLNP +GD+ GN + A EEA + L+L EL ++S P DL+ Sbjct: 1 MKIAIAQLNPTIGDLTGNAERILVAAEEAAIANVRLLLTPELSPLWVS--RPRDLLLHAD 58 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGF----PR---QDQEGVLNSVVILDAGNIIAVRDK 114 FI + + T+ + ++VG P + ++ + NS+ ++D G + + K Sbjct: 59 FIDRMQAQLTTVAAKIPPT-LAVLVGLATPNPEAIAKGEKALHNSIALIDQGKVQHIFHK 117 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRD------IRLGILICEDIWKNS----------N 158 LP Y F E R F G ++ +++G+ ICED+W + N Sbjct: 118 QLLPTYDVFDEDRYFEPGKQSNWFFLHPSPTVAPLKIGVTICEDLWNDQAFWGKRQYEIN 177 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + L + G + + +L+ASPY K + R ++ PI+Y NQVGG D+LIFDG Sbjct: 178 PLEQLAEAGVDLIVNLSASPYTVGKQRLREGMLHHGAQRYRTPILYANQVGGNDDLIFDG 237 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE--EEADY 276 S FD + QL + F E E+ DQQ + P + E + Sbjct: 238 GSVAFDREGQLVGRSPSFQESLLAVEFSPDQQTLSLPQGLPAAFQQTISPEYDADEAEIF 297 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A VL LRDY +K F K+++GLSGGIDSAL AAIAV A+G ENV +++P Y+S SL Sbjct: 298 AALVLGLRDYARKCGFSKIVLGLSGGIDSALVAAIAVAAVGAENVLGVLMPSPYSSEHSL 357 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DA A + L +++++PI + F +++ G+ EN+QSRIRGN+LMA++N Sbjct: 358 SDAIALVENLQIRHEIIPIEPAMQAFETMLGDLFAGTEFGVAEENLQSRIRGNLLMAIAN 417 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +L++T NKSE++VGY TLYGDM+GG + D+ K +VF L W N Sbjct: 418 KFGYLLVSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKMRVFSLCQWLNRD--------- 468 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETV 515 E+IPP+I+ K PSAELRP Q DQ+SLPPYP+LD+I+KR++ +S + Y+ +TV Sbjct: 469 RELIPPAIITKPPSAELRPDQLDQDSLPPYPVLDEILKRVIHRNQSAPELHAAGYDHDTV 528 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 V LL+ +E+KRRQA G KIT ++FG PI+ ++ Sbjct: 529 AQVLKLLHRAEFKRRQAAPGLKITDRAFGTGWRMPIACRW 568 >gi|297161112|gb|ADI10824.1| NH(3)-dependent NAD(+) synthetase [Streptomyces bingchenggensis BCW-1] Length = 585 Score = 564 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 210/593 (35%), Positives = 312/593 (52%), Gaps = 45/593 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+ GN ++ QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLDGNTESIVHWTRHSSEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A +A+ L + D G G +VVG+ + + N+ +L G + Sbjct: 61 FVEASRAALHALAARLEDEGFGELPVVVGYLDRSERAQPRFGQPAGAPQNAAAVLHRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 I K +LPNY F E R F+ G + I + + + ICED+W++ + GA Sbjct: 121 ILTFAKHHLPNYGVFDEFRYFVPGQTLPMIRVHGVDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDGA 240 Query: 229 LAFQMKHFSEQNFMTEW----------------------HYDQQLSQWNYMSDDSASTMY 266 + + F+E + + H + A Sbjct: 241 VIARAPQFAEGCVLLDLDLPAADPGTVPQGVVDDGLRIEHLTLSADPLPAYEPELAGGTA 300 Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 L ++E Y A V+ LR YV KN F V+IGLSGGIDSAL AAIA DA+G +NV + + Sbjct: 301 ERLGDDEEIYTALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDAVGAQNVYGVAM 360 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P +Y+S S+ DAA A+ G + +PI + + + + +G+ EN+QSR+ Sbjct: 361 PSRYSSEHSIADAAELARRTGLNFRTVPIAPMFDAYMESLH------LTGLAEENLQSRL 414 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMA+SN ++L NKSE++ GY TLYGD G + P+KD+YKT +F+LA WRN Sbjct: 415 RGTMLMAISNQEGHIVLAPGNKSELACGYSTLYGDSVGAYGPIKDVYKTSIFRLAKWRNQ 474 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AAEERGQTP---PIPENSITKPPSAELRPGQVDTDSLPDYDVLDQILELYVDRDQGRAEI 531 Query: 507 -DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 Y+DE V + L+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+H Sbjct: 532 VAAGYDDELVTRILRLVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWREH 584 >gi|56751408|ref|YP_172109.1| NAD synthetase [Synechococcus elongatus PCC 6301] gi|56686367|dbj|BAD79589.1| glutamine-dependent NAD(+) synthetase [Synechococcus elongatus PCC 6301] Length = 574 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 205/577 (35%), Positives = 306/577 (53%), Gaps = 30/577 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQLNP +GD+ GN EA + G L+L EL + GYPP DL+ F+ Sbjct: 1 MKLAIAQLNPTIGDLTGNTQAIVAVAREAQQAGARLLLTPELSLCGYPPRDLLLLPDFLA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 A + ++ L + ++VG P + + + N V+++ G I K L Sbjct: 61 AIADQLEQLCREAPK-DIALLVGAPLPNPQAGIEGGKPLFNGAVLIENGEIRDRFYKQLL 119 Query: 118 PNYSEFHEKRTFISGYSN-DPIVFRD--IRLGILICEDIWKNSN----------ICKHLK 164 P Y F E R F SG + +R+G+ ICED+W L Sbjct: 120 PTYDVFDEDRYFQSGQGGWFDLQAEGETLRVGVSICEDLWNEPEFWGERRYESDPIAALV 179 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + L +L+ASPY K K R ++ +P++Y NQVGG D+LIFDG SF + Sbjct: 180 ADQIDLLVNLSASPYCFGKPKLREALLRHTCRRYQIPLLYANQVGGNDDLIFDGNSFVLN 239 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 ++ + KH + + +W QQ+ + ++ ++ Q+ + VL LR Sbjct: 240 AAGEVLQRGKHCQAELLIVDW---QQIQLAPATTAIASPSLTESQQDLAELWEVLVLGLR 296 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +++GLSGGIDSAL AA+A A+ ENV I++P Y+S S+ DA A A+ Sbjct: 297 DYTRKCGFKSIVLGLSGGIDSALVAALAAAAIEAENVLAILMPSPYSSDHSITDAIALAE 356 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L +++ + I L+ F +S + E+IQSRIRG +LMA +N ++L+T Sbjct: 357 NLQIRHETIAIAPLMTAFEHSLSDLFAGRSPDVTEEDIQSRIRGTLLMAAANKLGSLLVT 416 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL-----GPLTEV 459 T NKSE++VGY TLYGDM+GG + DL KT V+QL W NS TE+ Sbjct: 417 TGNKSELAVGYCTLYGDMNGGLAAIADLPKTWVYQLCHWLNSEAAAEVRSQHFPQAPTEI 476 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP SIL K+PSAELRP Q DQ+SLP Y +LDDI+ R++E +S ++ E + V Sbjct: 477 IPDSILTKAPSAELRPDQVDQDSLPDYAVLDDILVRLIEKHQSRKEILAAGHSSEVLDKV 536 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QA G K++ ++FG PI+ ++ Sbjct: 537 LGLVRRAEFKRKQAAPGLKVSDRAFGTGWRMPIACRW 573 >gi|254448980|ref|ZP_05062434.1| glutamine-dependent NAD+ synthetase signal peptide protein [gamma proteobacterium HTCC5015] gi|198261374|gb|EDY85665.1| glutamine-dependent NAD+ synthetase signal peptide protein [gamma proteobacterium HTCC5015] Length = 543 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 205/553 (37%), Positives = 299/553 (54%), Gaps = 30/553 (5%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMD---LILFTELFISGYPPEDLVFKKSFI 63 I + Q NP VGD++GNI A G D L + EL ++GYPPEDL+++ +F+ Sbjct: 15 IRLIQCNPKVGDLSGNIDMI-----AAAVNGTDCEALCVLPELALTGYPPEDLLYRDAFM 69 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + ++DTL +++G P +++ + N+ +L G I++V K LPNY F Sbjct: 70 DEVALSLDTLAQRCASH--ALLLGAPLKEEGRLYNAAFLLQGGEIVSVYRKRVLPNYGVF 127 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + R+G+ +CED+W+ E + S+NASP++ K Sbjct: 128 DERRYFSEGDQVGVMEVNGHRIGVCVCEDLWQP-EPAASCASANVEVIVSMNASPFHVGK 186 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +R + + LPI YVN GGQDE++FDG SF G+ +L ++ + Sbjct: 187 QAEREATAAARAAETGLPIAYVNLWGGQDEVVFDGGSFFMSGEGELQNRIASGGDGVLEA 246 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 Q DDS A Y A ++ DY+ KN F V++GLSGGI Sbjct: 247 SLDQKQWRVADATCEDDSN---------LAALYRALTIATSDYINKNGFKGVVLGLSGGI 297 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A+AVDALG + V+ +M+P +YTS SL+DAA A+ G Y + I + Sbjct: 298 DSALVLALAVDALGADRVEAVMMPSRYTSQMSLDDAAQIAENFGVAYHTVSIEPSFDAAL 357 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + EN+Q+RIRG +LMALSN ++L T NKSE +VGY TLYGDM Sbjct: 358 NALQPLFGGAAVDTTEENMQARIRGLMLMALSNKKGLLVLPTGNKSEYAVGYSTLYGDMV 417 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF PLKD+ K++VF L+ WRN +G E+IP I+++ PSAEL P Q D++SL Sbjct: 418 GGFAPLKDVSKSRVFALSRWRNRNG---------EMIPQRIIDRPPSAELAPDQKDEDSL 468 Query: 484 PPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 P Y ILD I++ +E +S + + + V + +EYKRRQA G K+T + Sbjct: 469 PAYEILDQILELYIEGAQSPQEIIAKGFKADDVNDTVRRVNLNEYKRRQAAPGPKVTPCA 528 Query: 543 FGRDRLYPISNKF 555 FGR+R YPI++ F Sbjct: 529 FGRERRYPITSGF 541 >gi|187923115|ref|YP_001894757.1| NAD+ synthetase [Burkholderia phytofirmans PsJN] gi|187714309|gb|ACD15533.1| NAD+ synthetase [Burkholderia phytofirmans PsJN] Length = 566 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 219/582 (37%), Positives = 327/582 (56%), Gaps = 39/582 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQINVTVGDFAGNVAKIVAAARAAHNDGAKLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQD----------------QEGV-----LNS 99 F A ++A+ L + G ++VG P +D + GV N+ Sbjct: 60 FYAASAAALTDLATQLKPFAGLHVIVGHPLRDVTHNAAHGHGNANAPIERGVPPVDTFNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G + K +LPN F EKR F S ++ G++ICED W +++ Sbjct: 120 ASLIVGGEVRGTYRKQDLPNTEVFDEKRYFASDPQPFVFELDGVKYGVVICEDAW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ + N SPY+ NK R +I+ +I LP++YVN VG QDEL+FDG Sbjct: 179 AQMAKAAGAQVVLIPNGSPYHLNKEAVRFDILRARIRETGLPMVYVNMVGAQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF D + +L +M F E + E+ + + E Y A Sbjct: 239 SFVLDARGELVAKMAQFEEATAIVEFE----------DGKPLPAPIAPEQSIEAQVYAAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 V+ +RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S DA Sbjct: 289 VMGVRDYINKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A A+ +G +YD + I + + F S +++ ENIQ+RIRG +LMALSN Sbjct: 349 ADMARRVGVRYDEIAIAPMFDAFRSSLAEEFAGRAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNQATTF----AKQDV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLP Y +LD I++ +E + S Y + V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPEYDVLDAIMRMYMEEDRSLAEIIAAGYAVDDVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 525 TRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPVE 566 >gi|312878522|ref|ZP_07738403.1| NAD+ synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311794700|gb|EFR11148.1| NAD+ synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 540 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 205/565 (36%), Positives = 310/565 (54%), Gaps = 40/565 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K + + + +++F EL I GYPP+DL+F+K FI Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIEIIK--SHRDAKILIFPELSICGYPPKDLLFQKDFID 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AID + + D ++VG P + + NS +I G I + K LP+Y Sbjct: 59 AIDKAIDQIAKEVEDS--YVIVGSPTKSHHVSKLFNSAIIFYRGKIEKMIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R F + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFTPSPTREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELFQKGAKVFIN 176 Query: 174 LNASPYYHNKLKKRH-EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ + +++ + +P+IYVNQVGG DELIFDG S + +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVLSSKGRLIAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E + + + D A VL +RDY +K Sbjct: 237 AKEFEEDILEIELEKIDNMPEVDIHED------------ISWIKKALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALG+ENV + +P +Y+S SL+DA A LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLATEALGRENVLGVAMPSRYSSEHSLKDAQKLASNLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V I + + + + + + ENIQ+RIRGNILM +SN ++LTT NKSE+ Sbjct: 345 VYSIEEPFKSYLKMFNGS-EVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSEL 403 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PSA Sbjct: 404 AVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPSA 454 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q DQ++LPPY +LD I+ +E+++S + Y + V V ++ +EYKR+ Sbjct: 455 ELRPNQKDQDTLPPYEVLDPILVAYIEDQKSINEIVEMGYPKDLVLKVIKMVERAEYKRK 514 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QA G K+T+K+FG R PI ++ Sbjct: 515 QAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|116748019|ref|YP_844706.1| NAD+ synthetase [Syntrophobacter fumaroxidans MPOB] gi|116697083|gb|ABK16271.1| NH(3)-dependent NAD(+) synthetase [Syntrophobacter fumaroxidans MPOB] Length = 552 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 207/568 (36%), Positives = 307/568 (54%), Gaps = 38/568 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAI Q++P +GD GN AK + A R+G DL++F E+ + GYPP DL+ K SF++ Sbjct: 1 MRIAIGQIDPFIGDFKGNAAKICDGVDRARREGCDLVVFPEMALIGYPPRDLLDKPSFVR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 + ++ + G G++ G ++ G N+ V D G A+ K+ LP+Y Sbjct: 61 TSREHWEAIREASR--GIGVIFGAVDENPNGTGKPYHNAAVFFDDGKPAAIAHKMLLPSY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEF 170 F E+R F G + FR RLGI ICED+W + + + L++ Sbjct: 119 DVFDEERYFEPGKHATWVDFRGERLGITICEDVWNVPRFLPRRLYHCDPIRELEQASVSV 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +++ASPY+ K E++ +IYVNQVGG DELIF G S +D +L Sbjct: 179 IVNISASPYHVGKASYVGELLRSHAQRSGTQVIYVNQVGGNDELIFHGHSMVWDEAGKLV 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 F E + + + + + E A VL LRDYV+KN Sbjct: 239 ASAADFREDFVVYD------------TRTHAGKLHAVGGDQAEEVIEALVLGLRDYVRKN 286 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F K ++GLSGG+DSAL +AV ALG ENV + +P + +P+SLEDA A+ LG + Sbjct: 287 RFGKAVVGLSGGVDSALTVCLAVLALGAENVLGVGMPGPFNAPESLEDAKELARRLGIAF 346 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + +PI DL + ++ +P + EN+Q+RIRG ILMA+SN +LL+T NKSE Sbjct: 347 ETVPIGDLFDAALRTLAPPFHGQPRDVTEENLQARIRGMILMAISNKFNRILLSTGNKSE 406 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 I+VGY TLYGDM+GG + L D+ KT V++LA N+ + IP L ++PS Sbjct: 407 IAVGYCTLYGDMNGGLSVLGDVPKTMVYELARKLNAQH---------DWIPERTLVRAPS 457 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKR 529 AELRP QTDQ++LPPY +LD I+ VE ++ V++V + +EYKR Sbjct: 458 AELRPDQTDQDTLPPYEVLDAILADYVEKRLPAEEIASHGWDAALVKWVTDRVDCNEYKR 517 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFRD 557 QAP ++T K+FG R PI++ +R+ Sbjct: 518 WQAPPILRVTTKAFGMGRRNPIAHGYRE 545 >gi|329934914|ref|ZP_08284955.1| carbon-nitrogen ligase [Streptomyces griseoaurantiacus M045] gi|329305736|gb|EGG49592.1| carbon-nitrogen ligase [Streptomyces griseoaurantiacus M045] Length = 586 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 208/594 (35%), Positives = 310/594 (52%), Gaps = 46/594 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD++GN+ R E +G L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLSGNVEAVLRRTRECAERGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A +A+ L G G ++VG+ + + N+ +L G I Sbjct: 61 FVEASRAAVRELAVRLAAEGLGELPVLVGYLDRSESAQPKYGQPAGTPRNAAAVLYRGRI 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + + + + ICED+W++ + A Sbjct: 121 ALRFAKHHLPNYGVFDEFRYFVPGDTMPVLRLHGVDIALAICEDLWQDGGRVPAARSSRA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ GGQDEL+FDG + D + + Sbjct: 181 GLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMTGGQDELVFDGDTIVVDREGE 240 Query: 229 LAFQMKHFSEQNFMTEWH--------------YDQQLSQWNYMSDDSASTMYIPL----- 269 + + F E + + D L + + Y P Sbjct: 241 VVSRAPQFQECAVLLDLDLPGVSAEAPDDGAVLDDGLRVERLVVSEEPLPAYEPELTGGY 300 Query: 270 ----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 +++E Y+A V LR Y +KN F V+IGLSGGIDSAL AAIA DA+G ENV + Sbjct: 301 ADRLEDDEEIYSALVTGLRAYARKNGFRSVLIGLSGGIDSALVAAIACDAVGPENVYGVS 360 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P KY+S S DAA A+ G + + I + + + + E +G+ EN+QSR Sbjct: 361 MPSKYSSEHSRGDAAELARRTGLNFRTISIAPMFDAYMAST------ELTGLAEENLQSR 414 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +RG +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 LRGTLLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTTVFELARWRN 474 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 G P IP + + K PSAELRP Q D +SLP YP+LD I+ R V+ ++ Sbjct: 475 RAAAERGETP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILARYVDRDQGADE 531 Query: 506 N-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 + + E V ++ +EYKRRQ P GTKI+AK FG+DR PI+N +R+ Sbjct: 532 IVEAGFERELVVKTLRMVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNAWRER 585 >gi|312623382|ref|YP_004024995.1| nad+ synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312203849|gb|ADQ47176.1| NAD+ synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 540 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 205/565 (36%), Positives = 312/565 (55%), Gaps = 40/565 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K R + + + +++F EL I GYPP+DL+F+K FI+ Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIRIIK--SHRDAKILIFPELAICGYPPKDLLFQKDFIE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AI+ + + D ++VG P + + NS +I G I + K LP+Y Sbjct: 59 AVDKAIEEIAKEVDDSF--VIVGSPTKSHHVSKLFNSAIIFHQGKIEKIIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R FI + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFIPSPAREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELSQKGAKMFIN 176 Query: 174 LNASPYYHNKLKKRH-EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASP+++ KLK + +++ + +P+IYVNQVGG DELIFDG S ++ + Sbjct: 177 LSASPFHYTKLKTQRLKVLKEAATKYGIPVIYVNQVGGNDELIFDGNSVVVSSNGKVVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E ++ + D A VL +RDY +K Sbjct: 237 AKEFEEDILEIELEKIDKMPEVEIHED------------ISWIKKALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALG ENV + +P +Y+S SL+DA A+ LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAAEALGPENVLGVAMPSRYSSEHSLKDAKQLAENLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V I + + + + + + ENIQ+RIRGNILM +SN ++LTT NKSE+ Sbjct: 345 VYSIEEPFKAYLKMFNGS-EIALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSEL 403 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PSA Sbjct: 404 AVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPSA 454 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q DQ++LPPY +LD I+ +E+++S + Y + V V ++ +EYKR+ Sbjct: 455 ELRPNQKDQDTLPPYEVLDPILISYIEDQKSINEIVEMGYPKDLVLKVIKMVERAEYKRK 514 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QA G K+T+K+FG R PI ++ Sbjct: 515 QAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|311114516|ref|YP_003985737.1| NH(3)-dependent NAD+ synthetase [Gardnerella vaginalis ATCC 14019] gi|310946010|gb|ADP38714.1| NH(3)-dependent NAD+ synthetase [Gardnerella vaginalis ATCC 14019] Length = 571 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 206/579 (35%), Positives = 314/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQ++ VG+I+ N + R ++A+ D+++F E+ ++GYP EDL + + Sbjct: 7 MTSLRLALAQIDTCVGNISKNTDEILRFCKDASSGNADIVVFPEMTLTGYPIEDLALRAT 66 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-----EGVLNSVVILDAGNIIAVRDKIN 116 F +A S A +L D G + N ++++ G + V DK Sbjct: 67 FRKAASDAAYSLAKILKDSGLADLYVVVGTVGVDDELGKPRNRLLVIHDGKVELVYDKHF 126 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F SG + + +LG ICEDIW++ L K+G + L ++N Sbjct: 127 LPNYGVFDEFRIFSSGDDCGILNVKGAKLGFAICEDIWQDGGPVARLSKEGIDVLVTING 186 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + ++ P++YVNQVG QD+L+FDG SF + L + K F Sbjct: 187 SPYEEGKTDIRLKLAQKRAKELNAPLVYVNQVGAQDDLVFDGGSFVVNADGSLIERSKMF 246 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 + +++ D + + ++ + Y ACVL LRDY++KN F V Sbjct: 247 DQDLSFVDFNTDLDAQKCSTIAQKLDPDEEV--------YCACVLGLRDYMRKNGFKGVC 298 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL A +A DA G +NV I +P Y+S S +DA AK LG YD+ PI Sbjct: 299 LGLSGGIDSALVATMAADACGGQNVWGISMPSMYSSLGSKDDACDLAKRLGAHYDIQPIE 358 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + + + G+ AEN+Q+R+RG I+MA SN + L T NKSE++ GY Sbjct: 359 PLFKSFQNQL------DLQGVAAENLQARVRGVIVMAYSNSKGLLALATGNKSELACGYS 412 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-GLG----------------PLTEV 459 T+YGD GG+ P+KDL+KT+V+ L+ WRN GLG + + Sbjct: 413 TIYGDAVGGYAPIKDLFKTRVWALSRWRNRAAQNGVGLGMLPIAGSEDFPKDNAPKDSIL 472 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + + K PSAELRP Q D +SLP Y +LD +++ +E + +++ TV V Sbjct: 473 IPVNSIIKPPSAELRPGQKDSDSLPEYDLLDKVLEAHIELAHGRADLLADGFDERTVDTV 532 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K++A +FGRDR P++ FR+ Sbjct: 533 IRLVDRAEWKRRQYPLGPKVSAIAFGRDRRIPVTTAFRE 571 >gi|308234765|ref|ZP_07665502.1| NAD+ synthetase [Gardnerella vaginalis ATCC 14018] Length = 565 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 206/579 (35%), Positives = 314/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQ++ VG+I+ N + R ++A+ D+++F E+ ++GYP EDL + + Sbjct: 1 MTSLRLALAQIDTCVGNISKNTDEILRFCKDASSGNADIVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-----EGVLNSVVILDAGNIIAVRDKIN 116 F +A S A +L D G + N ++++ G + V DK Sbjct: 61 FRKAASDAAYSLAKILKDSGLADLYVVVGTVGVDDELGKPRNRLLVIHDGKVELVYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F SG + + +LG ICEDIW++ L K+G + L ++N Sbjct: 121 LPNYGVFDEFRIFSSGDDCGILNVKGAKLGFAICEDIWQDGGPVARLSKEGIDVLVTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + ++ P++YVNQVG QD+L+FDG SF + L + K F Sbjct: 181 SPYEEGKTDIRLKLAQKRAKELNAPLVYVNQVGAQDDLVFDGGSFVVNADGSLIERSKMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 + +++ D + + ++ + Y ACVL LRDY++KN F V Sbjct: 241 DQDLSFVDFNTDLDAQKCSTIAQKLDPDEEV--------YCACVLGLRDYMRKNGFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL A +A DA G +NV I +P Y+S S +DA AK LG YD+ PI Sbjct: 293 LGLSGGIDSALVATMAADACGGQNVWGISMPSMYSSLGSKDDACDLAKRLGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + + + G+ AEN+Q+R+RG I+MA SN + L T NKSE++ GY Sbjct: 353 PLFKSFQNQL------DLQGVAAENLQARVRGVIVMAYSNSKGLLALATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-GLG----------------PLTEV 459 T+YGD GG+ P+KDL+KT+V+ L+ WRN GLG + + Sbjct: 407 TIYGDAVGGYAPIKDLFKTRVWALSRWRNRAAQNGVGLGMLPIAGSEDFPKDNAPKDSIL 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + + K PSAELRP Q D +SLP Y +LD +++ +E + +++ TV V Sbjct: 467 IPVNSIIKPPSAELRPGQKDSDSLPEYDLLDKVLEAHIELAHGRADLLADGFDERTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K++A +FGRDR P++ FR+ Sbjct: 527 IRLVDRAEWKRRQYPLGPKVSAIAFGRDRRIPVTTAFRE 565 >gi|284030550|ref|YP_003380481.1| NAD+ synthetase [Kribbella flavida DSM 17836] gi|283809843|gb|ADB31682.1| NAD+ synthetase [Kribbella flavida DSM 17836] Length = 590 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 218/591 (36%), Positives = 309/591 (52%), Gaps = 44/591 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQLN VGD+ GN K A +G +I F EL ++GYP EDL + S Sbjct: 1 MPQLRLALAQLNVTVGDLDGNADKIVSWTRNAVERGAHVIAFPELALTGYPVEDLALRGS 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVGFPRQD-------------QEGVLNSVVILDA 105 F+ A S + TL D G +V G+ + + NS ++ Sbjct: 61 FVDASQSKVQTLARRLADEGLGDIVVVCGYLDRATGTAMGVDRLGRPKGSPTNSAAVIHQ 120 Query: 106 GNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 G ++ K +LPNY F E R F+ G + + + + ++ICED+W++ + Sbjct: 121 GKVVTSAVKHHLPNYGVFDEFRHFVPGDTLQVVRIHGVDVALVICEDLWQDGGPVAVTRA 180 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 GA L +N+SPY NK R E+V+ + P+ YVN VGGQDEL+FDG S D Sbjct: 181 AGAGLLLVVNSSPYEANKDDVRGELVSRRAREAGCPLAYVNLVGGQDELVFDGDSLIADA 240 Query: 226 QQQLAFQMKHFSEQNFMTEWHY--------DQQLSQWNYMS----------DDSASTMYI 267 + ++ + F + + + D + + A Sbjct: 241 EGKVFARAPQFEHGSMIVDLDLPAATGIPVDAHEGIRIVHTVLHEEPLPAYEPIAVAQAP 300 Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L +E Y A V LRDYV KN F V++GLSGGIDS+L AAIA DA+G E+V + P Sbjct: 301 RLSDEAELYAAIVTGLRDYVHKNGFTSVLLGLSGGIDSSLVAAIACDAIGAEHVVGVSNP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 Y+S S +DAA A G Y V+PI +V F + +G+ EN+Q+R+R Sbjct: 361 SVYSSDHSKDDAAELAARTGLNYRVVPIQPMVQPFLDTLG------LTGLAEENLQARVR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 I M LSN ++L NKSE+SVGY T+YGD GG+ PLKDL KT V +LA WRN+ Sbjct: 415 AVIWMGLSNADGHLVLACGNKSELSVGYSTIYGDAVGGYAPLKDLPKTLVRRLAKWRNAD 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE-SFINN 506 + GL P IP + + K PSAELRP Q D +SLPPY +LDD++ VE + S Sbjct: 475 AVAKGLQP---PIPENAIAKPPSAELRPGQVDTDSLPPYDLLDDMLDDYVEQDRGSAELV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ E V V L+ +EYKRRQ P G K++ K+FGRDR PI+N +R+ Sbjct: 532 AAGFDPELVSKVIQLVDKAEYKRRQFPPGPKLSHKAFGRDRRLPITNAWRE 582 >gi|302342587|ref|YP_003807116.1| NAD+ synthetase [Desulfarculus baarsii DSM 2075] gi|301639200|gb|ADK84522.1| NAD+ synthetase [Desulfarculus baarsii DSM 2075] Length = 565 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 220/568 (38%), Positives = 307/568 (54%), Gaps = 25/568 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA AQ+NP VGD+A N A +A + ++ F EL + GYPPEDL+ K F+ Sbjct: 1 MRIAQAQINPTVGDLAANTAMILDYMAQARQAQAGVVCFPELAVCGYPPEDLLLKPRFLA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++ L G VVGFP + V N+ +L G + AV KI LPNY F Sbjct: 61 DARAAVERLALAAR--GVTAVVGFPLAEGGVVRNAAAVLAEGRVAAVYRKIELPNYGVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKH-LKKQGAEFLFSLNASPYYHNK 183 E+R F +G + + + ICED+W N + + G +++ SP++ K Sbjct: 119 ERRYFAAGDECLILDMGGTGVLVSICEDVWLAGNQVERVAAQAGVGLTINISGSPFHAGK 178 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 L +R EI+ G + Y N VGGQDEL+FDG S D QL+ F++ ++ Sbjct: 179 LGQRLEILGGFARRSGAAMCYANLVGGQDELVFDGGSMIIDPDGQLSACAPRFTQGLYIH 238 Query: 244 EWHYDQ------------QLSQWNYMSDDSASTMYIPLQEEEADY-NACVLSLRDYVQKN 290 + ++ S A+ P E + A L L DYV+KN Sbjct: 239 DLELPTRPPRPTPGATIVHVAAPAAPSGKIAAQTRAPELNTEDEVLAALGLGLADYVRKN 298 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F KV +GLSGGIDSAL AA+AV ALG +NV + +P +YTS ++L DA A LG + Sbjct: 299 GFGKVTLGLSGGIDSALTAAVAVSALGAQNVVGVTMPSQYTSGETLSDAQLLAANLGVEL 358 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +P+ + + F M L P G+ AEN+Q+RIRG ILM LSN ++LTT NKSE Sbjct: 359 LTVPLKGVYDVFIDQMRPALGPGPLGVEAENLQARIRGAILMTLSNRFGWLVLTTGNKSE 418 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +VGY TLYGDM+GGF +KD+ KT V++LA N E+IP S +E+ PS Sbjct: 419 TAVGYCTLYGDMAGGFALIKDVPKTLVYRLARRVNQRAGR-------ELIPASTIERPPS 471 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEY--NDETVRYVEHLLYGSEYK 528 AELRP Q D +SLP Y +LD I++ VE + + + V V ++ +EYK Sbjct: 472 AELRPDQKDTDSLPEYDVLDPILQAYVEQDMVLDEIAALGLADKDVVAKVVRMVDLNEYK 531 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKFR 556 RRQAP G KIT K+FGRDR PI+N++R Sbjct: 532 RRQAPPGVKITPKAFGRDRRLPITNRYR 559 >gi|119509152|ref|ZP_01628303.1| NAD(+) synthetase [Nodularia spumigena CCY9414] gi|119466318|gb|EAW47204.1| NAD(+) synthetase [Nodularia spumigena CCY9414] Length = 573 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 217/569 (38%), Positives = 314/569 (55%), Gaps = 35/569 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GD+ GN K A ++A +G L+L EL + GYPP DL+ SF+ Sbjct: 1 MKIAIAQLNPIIGDLPGNAQKILSAAQKAAAKGARLLLTPELSLCGYPPRDLLLNPSFVA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 A + L +D ++VG Q+ +G+ NS+ +L G + V K L Sbjct: 61 AMGMTLKQLATDL-QPNLAVLVGTVSQNLKAHSTGGKGLFNSIALLADGEVKQVFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQG 167 P Y F E R F G +I +G+ ICED+W N L Sbjct: 120 PTYDVFDENRYFEPGLQASYFTLDNIDIGVTICEDLWNDEDFLGKRSYPVNPIADLAILR 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + + +L+ASPY K + R ++ P+IY NQVGG D+LIFDG SF + Q Sbjct: 180 VDVIVNLSASPYSVGKQQYRESMLKHSALRFEQPMIYTNQVGGNDDLIFDGRSFALNRQG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ + F+ + ++ Q+ Q + ++ + EEE + A VL +RDY Sbjct: 240 EIVCRANGFTTDLIIVQFDEAQRDLQLSSVAP-------LYQSEEEEIWQALVLGVRDYA 292 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 QK F KV++GLSGGIDSAL AAIA ALGKENV +++P Y+S S+ DA A + LG Sbjct: 293 QKCRFSKVVLGLSGGIDSALVAAIASVALGKENVFGVLMPSPYSSSHSVSDALALGENLG 352 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 + +L I +L+ F ++ GI ENIQSRIRGN+LMA++N +LL+T N Sbjct: 353 IETTILKIGELMAGFDHTLADLFAGTEFGIAEENIQSRIRGNLLMAIANKFGYLLLSTGN 412 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY TLYGDM+GG + D+ KT+V+ L W N + E+IP +I+ K Sbjct: 413 KSEMAVGYCTLYGDMNGGLAVIADVPKTRVYALCHWLNR---------VREIIPQNIITK 463 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSE 526 PSAEL+P Q DQ+SLP Y ILDDI++ ++ N +S ++ V V ++ +E Sbjct: 464 PPSAELKPGQIDQDSLPDYEILDDILQHLIHNHQSAAQIVAAGHDPVIVNRVIQMVARAE 523 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G KIT ++FG PI++ + Sbjct: 524 FKRRQAPPGLKITDRAFGTGWRMPIASNW 552 >gi|294812315|ref|ZP_06770958.1| NH 3 -dependent NAD + synthetase [Streptomyces clavuligerus ATCC 27064] gi|326440851|ref|ZP_08215585.1| NH(3)-dependent NAD(+) synthetase [Streptomyces clavuligerus ATCC 27064] gi|294324914|gb|EFG06557.1| NH 3 -dependent NAD + synthetase [Streptomyces clavuligerus ATCC 27064] Length = 586 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 210/591 (35%), Positives = 312/591 (52%), Gaps = 44/591 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD++GN R + QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLSGNAESIVRRTRHSAEQGAHLVAFPEMALTGYPVEDLALRAS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F+ A +A+ L D G ++VG+ + + N+ +L G + Sbjct: 61 FVAASRAALLALAVRLADEDLGELPVIVGYLDRSEAAQPTYGQPAGAPRNAAAVLHRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + I + + + ICED+W++ + GA Sbjct: 121 VLSFAKHHLPNYGVFDEFRYFVPGDTLPVIRVHGVDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY NK R E+V + Y+ +GGQDEL+FDG S D + Sbjct: 181 GLLISINASPYEQNKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDASGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY-------------DQQLSQWNYMSDDSASTMYIP------- 268 + + FSE + + D +S D + Sbjct: 241 VVARAPQFSEGCVVLDLELPAAAPGIPSGIVDDGLRIDHVVVSADPLPSYDPELTGGYAE 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR Y KN F V+IGLSGGIDSAL AAIA DA+G +NV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAAIACDAVGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G + + I L + + ++ +G+ EN+QSR+R Sbjct: 361 SKYSSEHSKDDAAELARRTGLHFRTVSIEPLFDAYMGSLA------LTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTLLMAVSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTTVFRLAHWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPGQMDTDSLPDYDVLDRILELYVDRDQGKEAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +++E V L+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 532 AAGFDEELVTRTLRLVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWRE 582 >gi|307353508|ref|YP_003894559.1| NAD+ synthetase [Methanoplanus petrolearius DSM 11571] gi|307156741|gb|ADN36121.1| NAD+ synthetase [Methanoplanus petrolearius DSM 11571] Length = 550 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 212/568 (37%), Positives = 306/568 (53%), Gaps = 38/568 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I + QL+PVVGDI GN + DL++F ELF++GYPP DL+ +KSFI Sbjct: 1 MRITLVQLDPVVGDIDGNTERIDETLRLCRSDKPDLVVFPELFLTGYPPRDLLERKSFID 60 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLPN 119 A+ + + GI+ G P + + G+ NS +++ G + + K LP Sbjct: 61 RSYRAVKEIMEVSAGFPDTGILFGAPLRTGKETGRGLYNSALLVKDGELPFTQHKSLLPM 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAE 169 Y F E R F S D LGI ICED W + + L +GA+ Sbjct: 121 YDVFDEVRYFDPAPSTGVAALGDTTLGISICEDAWNDPLLFPGRFYTFDPQADLAAKGAD 180 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 +++ASP++ K R EI +P + VNQVGG DELIFDG S C D + Sbjct: 181 LFVNISASPFHAGKECVRFEIFRNHAKKHSVPFVVVNQVGGNDELIFDGRSMCLDAKGDP 240 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F E + + Y PL E E+ + A VL LRDYV+K Sbjct: 241 IVVLSSFEEAIVTID------------TNTPGVPGSYRPLGEAESIHRALVLGLRDYVKK 288 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F KVI+ LSGGIDSA+ +AV+ALG E+V +P Y+S S+ D+ A A+ LG + Sbjct: 289 CGFSKVIVSLSGGIDSAVVCCLAVEALGPESVVAATMPGPYSSAGSVGDSKALAENLGIR 348 Query: 350 YDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 +P+ + + + + + E+ + + ENIQ+RIRGN++MALSN ++L+T NK Sbjct: 349 LLEIPVTKIYDTYTGALGDLVDREKEASVTLENIQARIRGNLIMALSNEYGCLVLSTGNK 408 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++VGY TLYGDMSGG + D+ KT V++LA N VIP +I+ K Sbjct: 409 SEMAVGYCTLYGDMSGGLAVISDVPKTTVYKLAREINREWP---------VIPEAIILKP 459 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEY 527 PSAELRP+QTDQ+ LPPY ILD I++ ++ +S + + ++ ETV +V + +EY Sbjct: 460 PSAELRPNQTDQDLLPPYEILDGILEAYIDEMDSPADIVAKGFDKETVEWVVAQVNRNEY 519 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNKF 555 KRRQA G K+T K+FG R PI+ K+ Sbjct: 520 KRRQAATGLKVTPKAFGSGRRMPIAAKY 547 >gi|296123511|ref|YP_003631289.1| NAD+ synthetase [Planctomyces limnophilus DSM 3776] gi|296015851|gb|ADG69090.1| NAD+ synthetase [Planctomyces limnophilus DSM 3776] Length = 554 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 208/568 (36%), Positives = 311/568 (54%), Gaps = 38/568 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q NP VGD+AGN + A A G DL++ +EL +SGYPP+DL+ ++ F+ Sbjct: 1 MKIALLQTNPTVGDLAGNARLVQEAAHMAASSGADLLVTSELVLSGYPPKDLLSRQGFVA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ---EGVLNSVVILDAGNIIAVRDKINLPNYS 121 AC +D L + G+VVG P Q + N+ ++ G ++A K LPNY Sbjct: 61 ACDRWVDQLAGELPKE-LGVVVGHPTQRDCPQGRIANAASLIHEGKVLATIHKRLLPNYD 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-------------ICKHLKKQGA 168 F E+R F PI FR +LGI ICED W + L KQGA Sbjct: 120 VFDERRYFRPAQKLAPIPFRGEKLGIHICEDAWFHDPATFYATDPELLGDPVAELGKQGA 179 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +L+ASP+ K ++RHE++ H +P ++ +Q+GG D+L+FDG SF D Sbjct: 180 TLLINLSASPFEVGKSRRRHELMAYHARHWSIPFLFADQIGGNDDLVFDGQSFVLDANGS 239 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 + F + + + + E + A VL +RDY Sbjct: 240 CVATLPAFRRGLLQVDTQ------------ALPPRQISLQMPVESDLHEAMVLGIRDYCH 287 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K+ F ++GLSGG+DSAL A +A ALG E+V ++LP +Y++ SLEDA A+ L Sbjct: 288 KSGFTDCVLGLSGGVDSALVAYLAARALGPEHVHGLLLPSRYSTDHSLEDAILLAERLKI 347 Query: 349 KYDVLPIHDLVNHFF--SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 + +PI + + +++ + L +P+G+ +N+QSRIRG I+MA SNH + L T Sbjct: 348 DHCTIPIDAVHRAYEMIAVLGEELASKPAGLADQNLQSRIRGAIVMARSNHHGWLALATG 407 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE+++GY TLYGDM+G PL DLYK +V++L + N E+IP +IL Sbjct: 408 NKSELAMGYCTLYGDMNGALAPLSDLYKGEVYRLCEFINQQ-------EGKEIIPANILT 460 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSE 526 K PSAEL P+Q DQ++LPPY +LDDI++ +++ EES ++ TV +V L +E Sbjct: 461 KPPSAELAPNQFDQDTLPPYDMLDDILRGLIDREESVAALSDKFPATTVEWVARRLDRNE 520 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNK 554 YKR Q P G K++ ++FG R P++ + Sbjct: 521 YKRWQMPPGIKVSPRAFGVGRRMPMAAR 548 >gi|307717738|ref|YP_003873270.1| glutamine-dependent NAD(+) synthetase [Spirochaeta thermophila DSM 6192] gi|306531463|gb|ADN00997.1| probable glutamine-dependent NAD(+) synthetase [Spirochaeta thermophila DSM 6192] gi|315187354|gb|EFU21110.1| NAD+ synthetase [Spirochaeta thermophila DSM 6578] Length = 549 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 212/563 (37%), Positives = 307/563 (54%), Gaps = 37/563 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I +AQ+NPV+GD +GN+ K EA RQ DL++F EL + GYPP DL+ SF+Q Sbjct: 1 MRIGLAQINPVIGDFSGNVKKICSFAMEAYRQKADLVIFPELALCGYPPMDLLEHPSFVQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 A+ TL+ + G+VVG+ ++ + + N+ ++ I+ + K LP Y Sbjct: 61 ENLRALRTLQHELPPE-LGVVVGYVEKNKSAAGKPLHNTAALIHQRRILLRQHKTLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW----------KNSNICKHLKKQGAEF 170 F E R F + F+ RLGI ICED+W + + L QGAE Sbjct: 120 DVFDEARYFEPASERIVVPFKRRRLGIAICEDMWGETEPQPGLRYPIDPIQDLLDQGAEI 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +ASPYY K+ R +I+ +P++YVN VG D LIFDG S D + +L Sbjct: 180 ILIPSASPYYMEKVLLRAKIMELIGKGSGVPLVYVNMVGANDSLIFDGQSLVTDREGRLV 239 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 F+ F E F+ + A + + E A L +RDY+ K Sbjct: 240 FRAPAFEEGLFLIDTE------------ALPAPLPPLEVSRLEEVRGALHLGIRDYLTKT 287 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V +GLSGGIDSAL A +AV+ALG E V ++P +++S S+ DA A A LG + Sbjct: 288 GFDRVHLGLSGGIDSALVATLAVEALGPERVSAFLMPSQFSSEGSVHDAMALAGNLGIQA 347 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 LPI + + F S + Q P I ENIQ+RIRG ILMA SN ++++LTT NKSE Sbjct: 348 HTLPIRAVFDTFLSTLEPVFQGLPWDITEENIQARIRGTILMAYSNKMRSLVLTTGNKSE 407 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY T+YGD +G + DL+KTQV+ LA T VIP IL K PS Sbjct: 408 LAVGYCTIYGDTAGALAVIGDLFKTQVYALARHIRED---------TGVIPEEILTKPPS 458 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELRP+QTDQ+SLPPY +LD I++ + + + + ++ + VR+V ++ +E+KR Sbjct: 459 AELRPNQTDQDSLPPYEVLDQILELYLLRNLTAEDIIARGFDPDLVRHVLLMVVRAEHKR 518 Query: 530 RQAPVGTKITAKSFGRDRLYPIS 552 RQ P KI+ ++FG R PI+ Sbjct: 519 RQTPPVLKISPRAFGTGRRIPIA 541 >gi|312792463|ref|YP_004025386.1| nad+ synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179603|gb|ADQ39773.1| NAD+ synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 540 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 204/565 (36%), Positives = 308/565 (54%), Gaps = 40/565 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q+NP+VGDI GN K + + + +++F EL I GYPP+DL+F+K FI Sbjct: 1 MKVLLCQINPIVGDIEGNTKKIIEIIK--SHRDAKILIFPELSICGYPPKDLLFQKDFIA 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKINLPNYSE 122 A AID + + D ++VG P + + NS +I G I + K LP+Y Sbjct: 59 AIDKAIDQIAKEVEDS--YVIVGSPTKSHHVSKLFNSAIIFYRGKIEKMIHKTLLPSYDV 116 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK---------NSNICKHLKKQGAEFLFS 173 F E R F + + + I GI ICEDIW + N+ L ++GA+ + Sbjct: 117 FDENRYFTPSPTREVVTIEGINFGISICEDIWNINNDENAMYDINVLDELFQKGAKVFIN 176 Query: 174 LNASPYYHNKLKKRH-EIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 L+ASPY++ KL+ + +++ + +P+IYVNQ+GG DELIFDG S +L + Sbjct: 177 LSASPYHYTKLETQRLKVLKEAATKYGIPVIYVNQIGGNDELIFDGNSVVLSSDGRLVAK 236 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E E + + + D A VL +RDY +K Sbjct: 237 AKEFEEDILEIELEKIDNMPEVDIHED------------ISWIKKALVLGIRDYFEKTGI 284 Query: 293 -HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 K ++GLSGGIDS++ +A +ALG+ENV + +P +Y+S SL+DA A LG ++ Sbjct: 285 TKKAVVGLSGGIDSSVVCCLATEALGRENVLGVAMPSRYSSEHSLKDAQKLASNLGIEFR 344 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 V I + + + + + + ENIQ+RIRGNILM +SN ++LTT NKSE+ Sbjct: 345 VYSIEEPFKSYLKMFNGS-EVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSEL 403 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GG + DL K V++LA + N E+IP ++L K PSA Sbjct: 404 AVGYCTLYGDMAGGLAVISDLPKMLVYELARYINRE---------REIIPHNVLVKPPSA 454 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP+Q DQ++LPPY +LD I+ +E ++S + Y + V V ++ +EYKR+ Sbjct: 455 ELRPNQKDQDTLPPYEVLDPILVAYIEEQKSINEIVEMGYPKDLVLKVIKMVERAEYKRK 514 Query: 531 QAPVGTKITAKSFGRDRLYPISNKF 555 QA G K+T+K+FG R PI ++ Sbjct: 515 QAAPGLKVTSKAFGFGRRMPIVQRW 539 >gi|221205734|ref|ZP_03578749.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD2] gi|221174572|gb|EEE07004.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD2] Length = 593 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 225/580 (38%), Positives = 328/580 (56%), Gaps = 35/580 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 24 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHEDGAHLMIAPELALSGYPPEDLLLRPA 82 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGV-----------------LNSVVIL 103 F ++A+D L G ++VG P + GV N+ ++ Sbjct: 83 FYAEAAAALDALADALKPLDGLAVLVGHPLRGAPGVDGNANRPIERGVPPVDTYNAASLI 142 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + ++ G++ICED W +++ + Sbjct: 143 VGGRIVGTYRKQDLPNAEVFDEKRYFATDAEPLVFELNGVKFGVIICEDAW-HASAAQIA 201 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 202 KAAGAQVLLIPNGSPYHMNKEAMRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 261 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 DGQ L QM F E + + E+ + + PL + Y A VL + Sbjct: 262 DGQGTLVAQMPQFDEGHAIVEFD----------GARPLPGAIASPLPVDAQVYRALVLGV 311 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 312 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAADMA 371 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++L Sbjct: 372 RRVGVRYDEIAIAPMFDAFRAALAAEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 431 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ ++IP Sbjct: 432 TTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNATSDYG----RRDIIPER 487 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 488 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 547 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 +EYKRRQAP+G ++T ++FGRD YPI+++F + + E Sbjct: 548 KLNEYKRRQAPIGIRVTHRAFGRDWRYPITSRFAERLGER 587 >gi|323525223|ref|YP_004227376.1| NAD+ synthetase [Burkholderia sp. CCGE1001] gi|323382225|gb|ADX54316.1| NAD+ synthetase [Burkholderia sp. CCGE1001] Length = 593 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 227/599 (37%), Positives = 330/599 (55%), Gaps = 46/599 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQINVTVGDFAGNVAKIVAAARHAHHAGAKLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV------------------------ 96 F A ++A+ L + G ++VG P +D Sbjct: 60 FYTASAAALADLATQLKQFAGLHVIVGHPLRDDANGGANSGANGGANGGANQAHGNANRP 119 Query: 97 ----------LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLG 146 N+ +L G I K +LPN F EKR F S ++ G Sbjct: 120 IERGLPPVDTFNAASLLADGRIAGTYRKQDLPNTEVFDEKRYFASDPQPFVFELDGLKYG 179 Query: 147 ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 ++ICED W +++ + K GA+ L N SP++ NK R +I+ +I LP++YVN Sbjct: 180 VVICEDAW-HASAAQMAKAAGAQVLLIPNGSPFHLNKEAVRFDILRARIRETGLPMVYVN 238 Query: 207 QVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 VG QDEL+FDG SF D Q +L +M F E ++ + ++ S + Sbjct: 239 MVGAQDELVFDGGSFVLDAQGELVAKMAQFEEATAFVDFDNGAPVRGEADGVANAGSGVS 298 Query: 267 IPLQEE----EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQ 322 + E Y A V+ +RDYV KN F IIGLSGG+DSAL A+A DALG E V+ Sbjct: 299 SAIAPELSLEAQVYAALVMGVRDYVNKNGFPGAIIGLSGGVDSALVLAVACDALGAERVR 358 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI 382 +M+P +YT+ S DAA A+ +G +YD + I + + F S ++Q + P ENI Sbjct: 359 AVMMPSRYTADISTTDAADMARRVGVRYDEIAIAPMFDAFRSSLAQEFEGRPEDATEENI 418 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 Q+RIRG +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L Sbjct: 419 QARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCH 478 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES 502 +RN +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Sbjct: 479 YRNQAASF----EKQDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRS 534 Query: 503 FINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 Y E V+ V L+ +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 535 LAEIVAAGYAAEDVKRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPVG 593 >gi|91782435|ref|YP_557641.1| NAD synthetase [Burkholderia xenovorans LB400] gi|91686389|gb|ABE29589.1| DNA-directed RNA polymerase, subunit H [Burkholderia xenovorans LB400] Length = 562 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 220/578 (38%), Positives = 325/578 (56%), Gaps = 35/578 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQ+N VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQINVTVGDFAGNVAKIVAAARAAHNDGAKLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG-----------------VLNSVVIL 103 F A ++A+ L G ++VG P +D N+ ++ Sbjct: 60 FYAASAAALADLALQLKPFAGLHVIVGHPFRDAAHGHGNANAPIERGVPPVDTFNAASLI 119 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 G + K +LPN F EKR F + ++ G++ICED W +++ + Sbjct: 120 VDGEVRGTYRKQDLPNTEVFDEKRYFAADPQPFVFELDGVKYGVVICEDAW-HASAAQMA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ + N SPY+ NK R +I+ +I LP++YVN VG QDEL+FDG SF Sbjct: 179 KAAGAQVVLIPNGSPYHLNKEAVRFDILRARIRETGLPMVYVNMVGAQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 D + +L +M F E + E+ + + L E Y A V+ + Sbjct: 239 DAEGELVAKMAQFEEATAIVEFE----------NGKPLHTAIAPDLSIEAQVYAALVMGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG + V+ +M+P +YT+ S DAA A Sbjct: 289 RDYINKNGFPGALIGLSGGVDSALVLAVACDALGADRVRAVMMPSRYTADISTTDAAEMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F S ++Q ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRSSLAQEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN +VIP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNQATTFG----KQDVIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + S Y E V+ V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYEVLDAIMRMYMEEDRSLAEIIAAGYAVEDVKRVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 +EYKRRQAP+G ++T ++FGRD YPI++++ + + Sbjct: 525 KINEYKRRQAPIGIRVTHRAFGRDWRYPITSRYTEPVE 562 >gi|221199364|ref|ZP_03572408.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD2M] gi|221180649|gb|EEE13052.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD2M] Length = 570 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 225/580 (38%), Positives = 328/580 (56%), Gaps = 35/580 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHEDGAHLMIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGV-----------------LNSVVIL 103 F ++A+D L G ++VG P + GV N+ ++ Sbjct: 60 FYAEAAAALDALADALKPLDGLAVLVGHPLRGAPGVDGNANRPIERGVPPVDTYNAASLI 119 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + ++ G++ICED W +++ + Sbjct: 120 VGGRIVGTYRKQDLPNAEVFDEKRYFATDAEPLVFELNGVKFGVIICEDAW-HASAAQIA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 179 KAAGAQVLLIPNGSPYHMNKEAMRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 DGQ L QM F E + + E+ + + PL + Y A VL + Sbjct: 239 DGQGTLVAQMPQFDEGHAIVEFD----------GARPLPGAIASPLPVDAQVYRALVLGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 289 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAADMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRAALAAEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ ++IP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNATSDYG----RRDIIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 +EYKRRQAP+G ++T ++FGRD YPI+++F + + E Sbjct: 525 KLNEYKRRQAPIGIRVTHRAFGRDWRYPITSRFAERLGER 564 >gi|161524057|ref|YP_001579069.1| NAD synthetase [Burkholderia multivorans ATCC 17616] gi|189351182|ref|YP_001946810.1| NAD synthetase [Burkholderia multivorans ATCC 17616] gi|160341486|gb|ABX14572.1| NAD+ synthetase [Burkholderia multivorans ATCC 17616] gi|189335204|dbj|BAG44274.1| NAD+ synthase [Burkholderia multivorans ATCC 17616] Length = 566 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 226/580 (38%), Positives = 328/580 (56%), Gaps = 35/580 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHEDGAHLMIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV-----------------LNSVVIL 103 F ++A+D L G ++VG P + GV N+ ++ Sbjct: 60 FYAEAAAALDALADALKPFDGLAVLVGHPLRGAPGVDGNANRPIERGVPPVDTYNAASLI 119 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + +R G++ICED W +++ + Sbjct: 120 VGGRIVGTYRKQDLPNAEVFDEKRYFATDAEPLVFELNGVRFGVIICEDAW-HASAAQIA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 179 KAAGAQVLLIPNGSPYHMNKEAVRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 DGQ L QM F E + + E+ + + PL + Y A VL + Sbjct: 239 DGQGALVAQMPQFDEGHAIVEFD----------GARPLPGAIAPPLPVDAQVYRALVLGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 289 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAADMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRAALAAEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ ++IP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNATSDYG----RRDIIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 +EYKRRQAP+G ++T ++FGRD YPI+++F + + E Sbjct: 525 KLNEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERLGER 564 >gi|333027559|ref|ZP_08455623.1| putative NH(3)-dependent NAD(+) synthetase [Streptomyces sp. Tu6071] gi|332747411|gb|EGJ77852.1| putative NH(3)-dependent NAD(+) synthetase [Streptomyces sp. Tu6071] Length = 586 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 207/594 (34%), Positives = 309/594 (52%), Gaps = 44/594 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VVGD+ N + A +G L+ F E+ ++GYP EDL + + Sbjct: 1 MPQLRLALNQIDAVVGDLDANAESVVQWTRHAAERGAHLVAFPEMVLTGYPVEDLALRST 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A +A+ L + D G G +V+G+ + + N+ +L G + Sbjct: 61 FVEASRAALHALAARLVDEGLGGLPVVLGYLDRSETDQHRYGMPAGSPRNAAAVLHQGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 VLRFAKHHLPNYGVFDEFRYFVPGDTLPVVRVHGVDVALAICEDLWQDGGRVPATRAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R ++V + YV GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYVAMSGGQDELVFDGDSIVVDKDGS 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWN--------YMSDDSASTMYIPLQEEEAD----- 275 + + F+E F+ + ++ + + S +P E E Sbjct: 241 VITRAPQFTEGCFLLDLDLPPAPAEEPAGTVHDGLRIEHVTISPTPLPAYEPEYTGEYAE 300 Query: 276 --------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 Y A V LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV + +P Sbjct: 301 RLEDAEEVYGALVTGLRAYVEKNGFRSVLIGLSGGIDSALTAAIACDAIGAENVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A G Y PI + + + + + +G+ EN+Q+R+R Sbjct: 361 SKYSSEHSKDDAADLAARTGLHYRSAPIAPMFDAYMAALG------FTGLAEENLQARLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LM +SN ++L NKSE++VGY TLYGD G + P+KD+YK+QVF LA WRN Sbjct: 415 GTTLMGISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSQVFALARWRNQA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE-SFINN 506 G P IP + + K PSAELRP Q D +SLP Y +LD I+ V+ ++ S Sbjct: 475 AEQRGETP---PIPENTIAKPPSAELRPGQVDTDSLPDYDVLDRILAMYVDRDQGSDAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 ++ V V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R++ Sbjct: 532 AAGFDPAVVARVLRMVDNAEYKRRQYPPGTKISAKGFGKDRRMPITNRWRENAG 585 >gi|225872337|ref|YP_002753792.1| NAD+ synthetase [Acidobacterium capsulatum ATCC 51196] gi|225793431|gb|ACO33521.1| NAD+ synthetase [Acidobacterium capsulatum ATCC 51196] Length = 552 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 215/566 (37%), Positives = 298/566 (52%), Gaps = 33/566 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP VGD GN+ K A G L +F EL + GYPP DL+ K SF+ Sbjct: 1 MKIALAQINPTVGDFHGNVQKILDFTRRAADAGAHLAIFPELAVCGYPPADLLEKPSFVA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 C AI + +T ++ G+ P + V+NS +L G++ V+ K+ LP Y Sbjct: 61 RCEEAIAHIAHETASLRIAVLCGYVTPAPHGSGKHVMNSAALLSEGHVEFVQSKMLLPFY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEF 170 F E+R F F + I ICED W + + + L + GA Sbjct: 121 DVFDEQRYFAPARHQQICHFHGQSIAITICEDAWNDKSFWEHRRYSVDPIEELTRHGASV 180 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +L+ASPY+ K R ++ +LP++ VNQVGG D L+FDG S ++ Sbjct: 181 ILNLSASPYWRGKRTTRQHMLANIARQHNLPVVMVNQVGGNDSLVFDGTSIALAPDGRVC 240 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 Q + F E + + D A T + A +A L RDYV+K Sbjct: 241 AQARSFEEDLVLFDTE--------TLQGDLHAVTGPSEDDKTAALLDALTLGTRDYVRKC 292 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++GLSGGIDSAL AAIAV ALG ENV +P ++S S++D+ A LG + Sbjct: 293 GFSRVVVGLSGGIDSALVAAIAVRALGAENVHGYGMPSAFSSQGSIDDSRQLAAHLGIGF 352 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 DVLPIH L + ++ + ENIQSRIRG +LMA+SN A++LTT NKSE Sbjct: 353 DVLPIHGLYEKYLETLAPVFAGLKPDVTEENIQSRIRGALLMAVSNKRNALVLTTGNKSE 412 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +S GY TLYGDM G + D+ KTQV+ L + N E+IP +IL+K PS Sbjct: 413 MSTGYCTLYGDMVGALAVIGDVVKTQVYALCRYLNREQ---------EIIPHAILDKPPS 463 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLYGSEYK 528 AELRP Q D ++L PY LD I++ VE ES I Q + TVR V ++ +EYK Sbjct: 464 AELRPDQKDTDTLLPYDQLDPIVEAYVERYESAERIAASQNIDLATVRTVIRMIERAEYK 523 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNK 554 R+QA K+T K+FG R +PI+ K Sbjct: 524 RQQAAPVLKVTPKAFGLGRRFPIAVK 549 >gi|218780476|ref|YP_002431794.1| NAD+ synthetase [Desulfatibacillum alkenivorans AK-01] gi|218761860|gb|ACL04326.1| NAD+ synthetase [Desulfatibacillum alkenivorans AK-01] Length = 548 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 219/572 (38%), Positives = 321/572 (56%), Gaps = 39/572 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP+VGD G +K + ++A DL++F EL + GYPP DL+ +KSFI+ Sbjct: 1 MKIALAQINPIVGDFKGARSKIQEFAQKAKNLSCDLVIFPELSVCGYPPRDLLERKSFIR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 AC A+ +L D H G G+++GF + + N+ ++ + GNI+ V K LP Y Sbjct: 61 ACQDAVQSLLDDIH--GIGVILGFVDRVGGAPGKPIANAAMLFEDGNILEVVHKRLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAEF 170 F E R F G +P +++ + +G+ ICED W + + + L + A+ Sbjct: 119 DVFDESRYFAPGGKAEPFMYKGMNIGLTICEDAWNDKDLFPEQLYEWDPVQTLADKKADL 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + ++ ASP++ K R I++ L +YVNQVGG D LIFDGAS LA Sbjct: 179 IINIAASPFHAGKRAVRGSIMSHLAKKHRLSCVYVNQVGGNDHLIFDGASTVHTPGGDLA 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 F E + + E E+ A V + DYV+K Sbjct: 239 ALAGEFEEDLVTFDTE------------TGKGDIHPVCESEAESLAKALVTGVGDYVRKC 286 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F KV++GLSGGIDSAL A+A +ALG EN +I +P +YTS Q+ D A LGC Y Sbjct: 287 GFSKVVVGLSGGIDSALTLAVAAEALGPENTYSIFMPSEYTSQQNHTDTKELADNLGCPY 346 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +++PI + F S +S F +E G+ +NIQ+R RG+ILMA SN + AM+L+T NKSE Sbjct: 347 EIIPITPIFETFLSSLS-FCNKEDFGVTEQNIQARTRGSILMAFSNKTGAMVLSTGNKSE 405 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM+GG + + DL K V++++ + N E+IP SIL K+PS Sbjct: 406 VAVGYCTLYGDMNGGLSVISDLPKELVYEVSRYFNKD---------REIIPESILTKAPS 456 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKR 529 AELRP QTDQ+ LPPY +LD I+ +E+ + Y ++ VR + + +EYKR Sbjct: 457 AELRPDQTDQDDLPPYEVLDPILHAYIEDLKDPEEIIAMGYEEKIVRDIVRRVVRNEYKR 516 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFRDHISE 561 RQA G K+T+K+FG R YP++ +F+D E Sbjct: 517 RQAAPGLKLTSKAFGEGRRYPVAQRFKDQDGE 548 >gi|159039123|ref|YP_001538376.1| NAD+ synthetase [Salinispora arenicola CNS-205] gi|157917958|gb|ABV99385.1| NAD+ synthetase [Salinispora arenicola CNS-205] Length = 586 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 222/593 (37%), Positives = 322/593 (54%), Gaps = 46/593 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q+NP VGD+AGN R A G L+ F E+ ++GYP EDLVF++S Sbjct: 1 MTTLRLALCQVNPAVGDLAGNATTVREWTRRAADAGAQLVAFPEMMLTGYPVEDLVFRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ-----------EGVLNSVVILDAGN 107 FI A +A+D L +D G G ++VG+ D G N+ +L G+ Sbjct: 61 FIAASKAALDGLAADLAADGLGNLPVLVGYLDADGPPQVNGDAEPGRGARNAAALLHGGS 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 IA K +LPNY F E R F+ G + + + + + ICED+W+ ++ G Sbjct: 121 TIATYFKHHLPNYGVFDEDRYFVPGETLTVVRIGGVDVTLTICEDLWQVGGPFAAARQAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + ++N SPY K R +V + + I YVN VGGQDEL+F+G S + Sbjct: 181 VGLVLNINGSPYELKKDDIRLPLVRRRAAEAGATIAYVNMVGGQDELVFEGDSMIVTAEG 240 Query: 228 QLAFQMKHFSEQNFMTEWHY--------------DQQLSQWNYMSDDSAST--------M 265 L + F E + + D ++ A+ + Sbjct: 241 TLLARAPQFVEHLLVHDVDLPTATDGPPADVELADGMRVLHRHLESVPAAPTDQRATGGI 300 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 P +E + A +L LRDYV KN F V++GLSGGIDSA+ AA+AVDALG + V + Sbjct: 301 IEPAADEAEGWQALLLGLRDYVDKNRFPSVVLGLSGGIDSAVVAALAVDALGPDRVVGVS 360 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 LP +++S S EDAA AK G Y V PI +V+ + +S SG+ EN+Q+R Sbjct: 361 LPSQHSSEHSREDAAELAKRTGLDYRVEPIQPIVDTVLANLS------LSGLSVENLQAR 414 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +RG ILMALSN ++LTT NKSE++VGY TLYGD GGFNP+KD++KTQV+QLA WRN Sbjct: 415 VRGVILMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGFNPIKDVWKTQVWQLAKWRN 474 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 + + G P IP + + K PSAEL P Q D ++LP Y +LD I+ ++ + Sbjct: 475 AEALRRGETP---PIPENSIGKPPSAELSPGQLDSDTLPEYDLLDPILIGYIDGDLGRDG 531 Query: 506 -NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + ++ V V ++ +EYKRRQ+ GTKI+ K+FGRDR PI+N++R+ Sbjct: 532 LVEAGHDPAVVDQVLRMVDTAEYKRRQSAPGTKISMKAFGRDRRLPITNRWRE 584 >gi|254441088|ref|ZP_05054581.1| NAD synthase family [Octadecabacter antarcticus 307] gi|198251166|gb|EDY75481.1| NAD synthase family [Octadecabacter antarcticus 307] Length = 556 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 228/562 (40%), Positives = 337/562 (59%), Gaps = 13/562 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGDI GN KAR A E+ G D+++ E+F+ GY P+DL+ K Sbjct: 1 MSDRFRLTMAQLNPTVGDITGNAEKARFAWEQGRAAGADMVMLPEMFLVGYQPQDLIMKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++ ++ L +D DG + +G P ++ + + N+ +L G +I+ K LPN+ Sbjct: 61 AFEREVAAELERLAADCADGPM-LGIGGPFREGDKLHNAYFVLKNGRVISTTRKYFLPNF 119 Query: 121 SEFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + F E R F P + +R+G ICED W ++C+ + + GAE L N Sbjct: 120 NVFDEVRLFSRADMQGPFNTGEDAGPLRIGTPICEDAW-YPDVCEAMVESGAELLLVPNG 178 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R + ++ +P++Y+N VGGQD+ +FDG SF + LA QM F Sbjct: 179 SPYFRDKFSVRLNNMVARVIENDVPLVYLNMVGGQDDQVFDGGSFVLNRHGALAVQMPWF 238 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 + H D + ++++D + E + Y A VL LRDY+ K F KV+ Sbjct: 239 EDAI----AHVDFVRTDAGWVAEDGDKHLEPSAFETD--YAAMVLGLRDYMDKTGFKKVL 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGG+DSA+ AAIA DALG +NV+ +M+P +YTS SL+DA A A ALG +YD++PI Sbjct: 293 LGLSGGVDSAIVAAIAADALGPDNVRCVMMPSEYTSDASLDDAKAAAAALGVRYDIVPIG 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + ++ + G+ ENIQSRIRG +LMA SN MLLTT NKSE++VGY Sbjct: 353 AVRAAVTETLAPLFADLDEGLTEENIQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYA 412 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDMSGG+NP+KDLYKT+VF + WRN + E+IP +I++K PSAELR Sbjct: 413 TIYGDMSGGYNPIKDLYKTRVFDICRWRNVNHRPWMKASAGEMIPVAIIDKPPSAELRDD 472 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D +SLP Y +LD I+ +V+++ S + Y V+ +EHLL+ SEYKR Q+ G Sbjct: 473 QKDSDSLPEYDVLDGILTMLVDDDASVADCVAVGYGRTVVKKIEHLLFISEYKRFQSAPG 532 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 +++ K+F DR YPI N++RD Sbjct: 533 PRLSMKAFWLDRRYPIVNRWRD 554 >gi|302518666|ref|ZP_07271008.1| NAD(+) synthase [Streptomyces sp. SPB78] gi|302427561|gb|EFK99376.1| NAD(+) synthase [Streptomyces sp. SPB78] Length = 586 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 207/594 (34%), Positives = 309/594 (52%), Gaps = 44/594 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VVGD+ N + A +G L+ F E+ ++GYP EDL + + Sbjct: 1 MPQLRLALNQIDAVVGDLDANADSVVQWTRHAAERGAHLVAFPEMVLTGYPVEDLALRST 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A +A+ L + D G G +V+G+ + + N+ +L G + Sbjct: 61 FVEASRAALHALAARLVDEGLGGLPVVLGYLDRSETDQHRYGMPAGSPRNAAAVLHQGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 VLRFAKHHLPNYGVFDEFRYFVPGDTLPVVRVHGVDVALAICEDLWQDGGRVPATRAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R ++V + YV GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYVAMSGGQDELVFDGDSIVVDKDGS 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWN--------YMSDDSASTMYIPLQEEEAD----- 275 + + F+E F+ + ++ + + S +P E E Sbjct: 241 VITRAPQFTEGCFLLDLDLPPAPAEEPAGTVHDGLRIEHVTISPTPLPAYEPEYTGEYAE 300 Query: 276 --------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 Y A V LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV + +P Sbjct: 301 RLEDAEEVYGALVTGLRAYVEKNGFRSVLIGLSGGIDSALTAAIACDAIGAENVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A G Y PI + + + + + +G+ EN+Q+R+R Sbjct: 361 SKYSSEHSKDDAADLAARTGLHYRSAPIAPMFDAYMAALG------FTGLAEENLQARLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LM +SN ++L NKSE++VGY TLYGD G + P+KD+YK+QVF LA WRN Sbjct: 415 GTTLMGISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSQVFALARWRNQA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE-SFINN 506 G P IP + + K PSAELRP Q D +SLP Y +LD I+ V+ ++ S Sbjct: 475 AEQRGETP---PIPENTIAKPPSAELRPGQVDTDSLPDYDVLDRILAMYVDRDQGSDAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 ++ V V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R++ Sbjct: 532 AAGFDPAVVARVLRMVDNAEYKRRQYPPGTKISAKGFGKDRRMPITNRWRENAG 585 >gi|302336809|ref|YP_003802015.1| NAD+ synthetase [Spirochaeta smaragdinae DSM 11293] gi|301633994|gb|ADK79421.1| NAD+ synthetase [Spirochaeta smaragdinae DSM 11293] Length = 552 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 207/564 (36%), Positives = 299/564 (53%), Gaps = 30/564 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q+N V+GD +GN K E+A QG DL++ EL + GYPP DL+ SF + Sbjct: 1 MKIALGQMNAVIGDFSGNRKKILDYAEKAAGQGSDLLITPELSLCGYPPMDLLDYASFSR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE---GVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ L+ D G + VG+ + E G+ N V ++ G ++ + K LP Y Sbjct: 61 ENIHSLRILQRDLPK-GIAVAVGYVSVNNEAGKGLRNCVSVIRDGEVLFSQAKSLLPTYD 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIW----------KNSNICKHLKKQGAEFL 171 F E R F + F ++G ICEDIW + L GA+ + Sbjct: 120 VFDEARYFEPASTRKVFPFMGRKIGFAICEDIWWETEEAAGTRYPVDPVAELLDAGADMI 179 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 S +ASPYY+ KL R+ +++ S +P++YVN VGG D LIFDGAS +L Sbjct: 180 ISPSASPYYNGKLGVRYRLLSRIGSMGDVPVVYVNMVGGNDNLIFDGASMLVSPDGRLCH 239 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + E + +S++ +P + EA A VL +RDYV+K Sbjct: 240 ISPSWEEDLSFIDPDS------------SISSSLALPEEGMEAVRRALVLGIRDYVEKCG 287 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F +V +GLSGGIDSAL A +AV+ALG+E V+ +P +Y+S SL DA A LG + Sbjct: 288 FSRVHLGLSGGIDSALVATLAVEALGREQVRVFAMPSRYSSEGSLSDARKLADNLGISLE 347 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 +PI + ++ + EN+Q+RIRG ++MA SN ++LLTT NKSE+ Sbjct: 348 TIPIEPMFVSSLDSLTPHFAGRQPDVAEENVQARIRGLLMMAYSNKWGSLLLTTGNKSEL 407 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 + GY TLYGDM GG + + DL+K +VF L N I G E+IP +I+ K PSA Sbjct: 408 ATGYCTLYGDMCGGLSVIGDLFKVEVFALCKHINERSIERG---GNEIIPQAIISKPPSA 464 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETVRYVEHLLYGSEYKRR 530 ELR Q D++SLPPY +LD I+ + ES ++ E V + L+ +EYKRR Sbjct: 465 ELREDQKDEDSLPPYEVLDGILFHYLLKNESADEIARAGFDREQVGQILSLVGKNEYKRR 524 Query: 531 QAPVGTKITAKSFGRDRLYPISNK 554 QAP KI+ ++FG R PI+ K Sbjct: 525 QAPPVLKISPRAFGTGRRMPIARK 548 >gi|196230695|ref|ZP_03129556.1| NAD+ synthetase [Chthoniobacter flavus Ellin428] gi|196225036|gb|EDY19545.1| NAD+ synthetase [Chthoniobacter flavus Ellin428] Length = 543 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 210/566 (37%), Positives = 298/566 (52%), Gaps = 36/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI AQLN VGD+ GN K A + +QG +L+L EL ++GYPP+DLVFK F+ Sbjct: 1 MKIGFAQLNTTVGDLRGNAEKILAAYRDLVKQGAELVLTPELALTGYPPQDLVFKSRFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNYS 121 +D L G ++VGF + N+ +L G + K LP Y Sbjct: 61 LNLEKLDELHRSV--GEVPLLVGFIDINHGSGQPFHNAAAVLQRGQPLRKVHKSLLPTYD 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL---------KKQGAEFLF 172 F E R F +PI + G+ ICEDIW + + L +QG E + Sbjct: 119 VFDEDRYFEPAKCVEPIEIAGKKFGVTICEDIWTEKYLPRRLYGNSPVGSLVEQGIEAIL 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +L+ASP+ K +R E++ LPI Y N +GG D+L+FDG S FD L + Sbjct: 179 NLSASPFSIGKAARRAEMLGALAREHRLPIHYCNAIGGNDQLVFDGNSLAFDATGALHTR 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 + F+E+ + E S P EE Y A L RDY+ K F Sbjct: 239 LAPFAEECAVVEL-----------NPSSSTPVTAFPSAPEELFY-ALSLGTRDYLHKCGF 286 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 H ++GLSGGIDSA+ A IA ALG E+V + +P +Y+S S++D+ A AK LG + Sbjct: 287 HSTVLGLSGGIDSAVTACIAAHALGTEHVLGVTMPTQYSSQGSVDDSLAIAKNLGIRCLT 346 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 +PI F + P EN+Q R+RG LMALSN ++LLTT NKSE++ Sbjct: 347 IPIQRSFETFREQFREVFTGLPEDTTEENMQPRLRGMTLMALSNKFGSLLLTTGNKSELA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGDM GG + D+ KT V++LA W N E+IP + +EK PSAE Sbjct: 407 VGYCTLYGDMCGGLAVISDVPKTMVYELAEWINRD---------REIIPRATIEKPPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 L+P Q DQ++LPPY +LD I++ VE + S + ++++TVR+V + +EYKR Q Sbjct: 458 LKPDQRDQDTLPPYEVLDPILQLYVEEQLSGAEIIARGFDEKTVRWVVRRVDLNEYKRAQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNKFRD 557 A G K+T ++FG R P++ +F + Sbjct: 518 AVPGLKVTGRAFGLGRKMPVAQRFVE 543 >gi|221211577|ref|ZP_03584556.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD1] gi|221168938|gb|EEE01406.1| glutamine-dependent NAD(+) synthetase [Burkholderia multivorans CGD1] Length = 570 Score = 561 bits (1447), Expect = e-157, Method: Composition-based stats. Identities = 226/579 (39%), Positives = 328/579 (56%), Gaps = 35/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHEDGAHLMIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV-----------------LNSVVIL 103 F ++A+D L G ++VG P + GV N+ ++ Sbjct: 60 FYAEAAAALDALADALKPFDGLAVLVGHPLRGAPGVDGNANRPIERGVPPVDTYNAASLI 119 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + ++ G++ICED W +++ + Sbjct: 120 VGGRIVGTYRKQDLPNAEVFDEKRYFATDAEPLVFELNGVKFGVIICEDAW-HASAAQIA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 179 KAAGAQVLLIPNGSPYHMNKEAVRVDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 DGQ L QM F E + + E+ Q + PL + Y A VL + Sbjct: 239 DGQGTLVAQMPQFDEGHAIVEFDGGQ----------PLPGAIAPPLPVDAQVYRALVLGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 289 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAADMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRAALAAEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF LKD+ KT V++L +RN+ ++IP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVLKDIAKTLVYRLCRYRNATFDY----ARRDIIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISE 561 +EYKRRQAP+G ++T ++FGRD YPI+++F + + E Sbjct: 525 KLNEYKRRQAPIGIRVTHRAFGRDWRYPITSRFAERLGE 563 >gi|311895757|dbj|BAJ28165.1| putative glutamine-dependent NAD(+) synthetase [Kitasatospora setae KM-6054] Length = 581 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 213/588 (36%), Positives = 307/588 (52%), Gaps = 42/588 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q++P VGD+A N + R + A G DLI F E+ ++GYP EDL F+ S Sbjct: 1 MPNLRLALCQIDPWVGDLARNSEEVLRWSKRAAASGADLIAFPEMVLTGYPVEDLAFRGS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQEGVL------NSVVILDAGNIIAVR 112 F++ +A+ L + G G +VVG+ + + G N +L G ++ Sbjct: 61 FVEGSRAALVELAARLAAEGLGDVPVVVGYLGRGEPGSRYAGRPQNCAAVLRGGEVVTRF 120 Query: 113 DKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLF 172 K LPNY F E R F+ G + + + + ICEDIW+ + A L Sbjct: 121 AKHFLPNYGVFDEYRYFVPGDQLTVLRLHGVDVALAICEDIWQEGGRVAATGQAAAGLLL 180 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 S+N SPY +K R E+V + + P++Y+N VG QDEL+FDG S +L + Sbjct: 181 SVNGSPYERDKDDVRLELVRRRAAEAGCPLVYLNMVGAQDELVFDGESMVVAADGELLAR 240 Query: 233 MKHFSEQNFMTEWHY-----------------------DQQLSQWNYMSDDSASTMYIPL 269 F E + + D + ++ A + L Sbjct: 241 GPQFEEALLVLDLELPAAKEDGLPDGTVLADGLRLTRVDLGGAPKERPAEPIAPEVVERL 300 Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 +E Y A V R YV+KN V+IGLSGGIDSAL AAIAVDA+G ENV + +P + Sbjct: 301 DDEAEVYAALVEGTRAYVRKNGMRSVLIGLSGGIDSALVAAIAVDAIGAENVYGVSMPSR 360 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 Y+S S +DAA A+ G + + I + + + E +G+ EN+QSR+RG Sbjct: 361 YSSQHSRDDAAELARRTGLHFRTVSIAPMFDAYLGAT------ELTGLAEENLQSRLRGT 414 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 LLMAISNQEGQIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTLVFRLARWRNEAAE 474 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQ 508 G P IP + + K PSAELRP Q D +SLP Y +LD ++ R VE +E Sbjct: 475 ARGEVP---PIPENTIVKPPSAELRPDQKDTDSLPDYDLLDAVLARYVEGDEGRDAIVAA 531 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + E V V L+ +EYKRRQ P G K++ K+FGRDR PI+N++R Sbjct: 532 GFPAEVVDRVVRLVDTAEYKRRQYPPGPKVSPKNFGRDRRLPITNRWR 579 >gi|332981044|ref|YP_004462485.1| NAD+ synthetase [Mahella australiensis 50-1 BON] gi|332698722|gb|AEE95663.1| NAD+ synthetase [Mahella australiensis 50-1 BON] Length = 548 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 211/564 (37%), Positives = 302/564 (53%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+AIAQ NP +GDI GNI K +++ G +L++F E+ GYPP+DL+ FI+ Sbjct: 1 MKVAIAQSNPTIGDINGNIDKMIGMIDKSRAAGAELVVFPEMATIGYPPKDLLLNSDFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A + + L GI+ G D + NS ++ G+II+ +DK LP Y Sbjct: 61 ALNDLTERLL-LPVSHDIGILFGTVTYDNISGMLCNSALLAYNGDIISRQDKSLLPTYDV 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEFLF 172 F E R FI + + F D++LG+ ICEDIW ++ L Q + Sbjct: 120 FDEARYFIPADTRQCMQFGDLKLGVSICEDIWNDKDFWDRPRYPLDVIAELALQQPDMFI 179 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASPY++ K R +++ H PIIY NQVG DELIFDG SFC D A Q Sbjct: 180 NISASPYHYGKFALRSDMIKNIAKKYHTPIIYANQVGANDELIFDGGSFCIDALGNRALQ 239 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 K F E + Q + +Y P ++ ++A VL +RDY K Sbjct: 240 AKVFDEDIITIDSQKLMQGTYSSYD----------PNEDIAWMHDALVLGIRDYFHKTGC 289 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K ++ LSGGIDSA+ A+AVDALGK NV + +P +Y+S S +DA AK L ++ Sbjct: 290 KKTVVALSGGIDSAVVCALAVDALGKRNVLGLSMPSRYSSTGSRDDAYVLAKNLDIEFRT 349 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 PI D+ + + ENIQ+RIRGN +M ++N M LTT NKSE++ Sbjct: 350 YPIEDVFEACLRTFNGD-SPPKGDLAEENIQARIRGNFIMFIANRENRMALTTGNKSELA 408 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGDM G P+ D+ KT V++LA + N E+IP S + K+PSAE Sbjct: 409 VGYCTLYGDMCGALAPISDVPKTMVYELARYINREY---------EIIPESTIAKAPSAE 459 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQ 531 LRP Q D++SLPPY +LD I+ +E +SF Y + V+ + H + +E+KRRQ Sbjct: 460 LRPDQKDEDSLPPYSVLDPILHAYIEENKSFAQIVAMGYEPDLVKDIIHKVDRAEFKRRQ 519 Query: 532 APVGTKITAKSFGRDRLYPISNKF 555 A G K+T K+FG R PI+ ++ Sbjct: 520 AAPGLKVTTKAFGIGRRMPIAQRW 543 >gi|158338012|ref|YP_001519188.1| NAD synthetase [Acaryochloris marina MBIC11017] gi|158308253|gb|ABW29870.1| NAD+ synthetase [Acaryochloris marina MBIC11017] Length = 569 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 207/566 (36%), Positives = 308/566 (54%), Gaps = 28/566 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP +GD+ GN A A ++G L+L EL + GYPP DL+ SF++ Sbjct: 1 MKIAIAQLNPTIGDLVGNAEAIAAAATAAEQEGATLLLTPELSLCGYPPRDLLLDPSFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 A + +D L + ++VG Q + + NS+V L G I K LP Y Sbjct: 61 AAQTTLDQLATHLPAK-LHVLVGSVQQNAAQGGKPLFNSIVHLHNGEIQQCFHKHLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAEF 170 F E R F G+ + + ++ ++G+ ICED+W NS L + Sbjct: 120 DVFDEDRYFEPGHQPNVLDLKEGKIGVTICEDLWNNSEFWEKQAYAVDPVAELMSYNVDL 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + +L+ASP+ K R ++ H P+IY NQVGG D+LIFDG S + Q + Sbjct: 180 IINLSASPFCVGKQALREAMLRHHAQQYHCPLIYANQVGGNDDLIFDGRSVAVNRQGDVV 239 Query: 231 FQMKHFSEQNFMTEWH-YDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + K F+ + ++ +D S+ D + + ++A VL LRDY QK Sbjct: 240 GRAKGFAPDLLLFDYEAHDLLPSRIEPAVSDINAEI----------WSALVLGLRDYAQK 289 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F + ++GLSGGIDS+L AAIA ALG ENV +++P Y+S S++DA A+ LG Sbjct: 290 CGFSQAVLGLSGGIDSSLVAAIAAAALGPENVLGVLMPSPYSSDHSIKDAEDLAQNLGMP 349 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 L I + + ++S G+ ENIQ+RIRGN+LMA++N +L++T NKS Sbjct: 350 TTQLAIASAMQTYDQILSSVFAGTEPGVAEENIQARIRGNLLMAIANKFGRLLISTGNKS 409 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY TLYGDM+GG + D+ KT+V++L W N+H L +IP S++ K P Sbjct: 410 EMAVGYCTLYGDMNGGLAAIADVPKTRVYELCRWLNTHTPP-ELEEHGIIIPDSVITKPP 468 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAEL+P Q DQ+SLP Y +LDDI+ R V++ +S + V + ++ +E+K Sbjct: 469 SAELKPGQVDQDSLPDYDVLDDILYRYVDHHQSSQQIIAAGHPTAIVDRIIQMVKRAEFK 528 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNK 554 RRQAP G KIT ++FG PI+ + Sbjct: 529 RRQAPPGLKITDRAFGTGWRMPIAAR 554 >gi|167585816|ref|ZP_02378204.1| NAD synthetase [Burkholderia ubonensis Bu] Length = 561 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 219/576 (38%), Positives = 327/576 (56%), Gaps = 34/576 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG----------------VLNSVVILD 104 F A ++A+DTL ++ G ++VG P + N+ ++ Sbjct: 60 FYAASAAALDTLAAELKAFDGLAVLVGHPLRVPGVDGNANRPIERGVPPSDTYNAASLIV 119 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G I+ K +LPN F EKR F + ++ G+++CED W +++ + K Sbjct: 120 GGEIVGTYRKQDLPNAEVFDEKRYFATDAEPLVFDLNGVKFGVIVCEDAW-HASAAQIAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA+ L N SPY+ NK R +I+ +I LP+ YVN VG QDEL+FDG SF D Sbjct: 179 AAGAQVLLIPNGSPYHMNKEAVRMDILRARIRETGLPMAYVNLVGAQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 L +M F E + + E+ + + L E Y A VL +R Sbjct: 239 AAGALVAKMPQFEEGHAIVEFD----------GARPLPGAIAPELSLEAQVYRALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F ++GLSGG+DSAL AIA DALG E V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGALVGLSGGVDSALVLAIACDALGPERVRAVMMPSRYTADISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++LT Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAGEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVLT 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ + ++IP I Sbjct: 409 TGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEYAT----RDIIPERI 464 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLY 523 L ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V L+ Sbjct: 465 LTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVQRVTRLIK 524 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 INEYKRRQAPIGIRVTHRAFGRDWRYPITSRFAERL 560 >gi|302869087|ref|YP_003837724.1| NAD+ synthetase [Micromonospora aurantiaca ATCC 27029] gi|315504440|ref|YP_004083327.1| nad+ synthetase [Micromonospora sp. L5] gi|302571946|gb|ADL48148.1| NAD+ synthetase [Micromonospora aurantiaca ATCC 27029] gi|315411059|gb|ADU09176.1| NAD+ synthetase [Micromonospora sp. L5] Length = 586 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 222/593 (37%), Positives = 324/593 (54%), Gaps = 46/593 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q+NP VGD+AGN R +A G L+LF EL ++GYP EDLVF++S Sbjct: 1 MPTLRLALCQVNPTVGDLAGNAGLVRSWTRQAADAGAQLVLFPELMLTGYPVEDLVFRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ-----------EGVLNSVVILDAGN 107 F+ A +A+ L +D G G ++VG+ D G N+ +L G Sbjct: 61 FVAASRAALHRLAADLAADGLGDLPVLVGYLDADGPPQVSSDAEPGRGARNAAAVLHRGE 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 ++A K +LPNY F E R F+SG + + + + + ICED+W+ ++ G Sbjct: 121 VVATYFKHHLPNYGVFDEDRYFVSGDTLTVVRVGGVDVALTICEDLWQAGGPFAVAREAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + S+N SPY NK R +V + + I YVN VGGQDEL++DG S Sbjct: 181 VGLVLSINGSPYELNKDDVRLPLVRRRAAEAGAAIAYVNMVGGQDELVYDGDSMVVAADG 240 Query: 228 QLAFQMKHFSEQNFMTEWHY--------------DQQLSQWNYMSDDSAST--------M 265 L + F E + + D + + A+ + Sbjct: 241 TLLTRAPQFVEHLLVHDLELPAATGAPGGTVAPADGMRVARHEIPAIPAAPSGPAADGGI 300 Query: 266 YIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIM 325 P+ +E ++A VL LRDY+ KN F V++GLSGGIDSA+ AAIAVDA+G E V + Sbjct: 301 IEPVADEAEVWHALVLGLRDYIDKNRFPSVVLGLSGGIDSAVAAAIAVDAVGPERVVGVS 360 Query: 326 LPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSR 385 +P +++S S DA AK G Y V PI +V+ F + MS SG+ EN+Q+R Sbjct: 361 MPSQHSSEHSRTDAEDLAKRTGLDYRVEPIQPMVDTFLANMS------LSGVAVENLQAR 414 Query: 386 IRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN 445 +RG ILMALSN ++LTT NKSE++VGY TLYGD GG+NP+KD++KT V++LA WRN Sbjct: 415 VRGVILMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGYNPVKDVWKTLVWRLAKWRN 474 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN 505 + + G P IP + + K PSAEL P Q D ++LP Y +LD I+ V+ + Sbjct: 475 TDAVRRGQTP---PIPENSIGKPPSAELSPGQLDSDTLPDYDVLDPILIGYVDGDLGRDG 531 Query: 506 -NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 + ++ V V ++ +EYKRRQ+ GTKI+ K+FGRDR PI+N++R+ Sbjct: 532 LVESGHDPAVVDKVLRMVDTAEYKRRQSAPGTKISMKAFGRDRRLPITNRWRE 584 >gi|330469435|ref|YP_004407178.1| NAD+ synthetase [Verrucosispora maris AB-18-032] gi|328812406|gb|AEB46578.1| NAD+ synthetase [Verrucosispora maris AB-18-032] Length = 588 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 222/595 (37%), Positives = 315/595 (52%), Gaps = 48/595 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+ Q+NP VGD+ GN R A G L+LF E+ ++GYP EDLVF++S Sbjct: 1 MPTLRLALCQVNPSVGDLTGNADIVRAWSRRAADAGAQLVLFPEMVLTGYPVEDLVFRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ-----------EGVLNSVVILDAGN 107 F+ A +A+D L +D G G IVVG+ D G N+ +L G Sbjct: 61 FVAASKAALDRLATDLAADGLGAVPIVVGYLDADGPPQVSGDAEPGRGARNAAALLHRGE 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 + K +LPNY F E R F+ G + + + + + ICED+W+ ++ Sbjct: 121 VRITYFKHHLPNYGVFDEDRYFVPGDTLTVVRLGGVDVALTICEDLWQAGGPFAAARQAD 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + S+N SPY NK R +V + + I YVN VGGQDEL+F+G S Sbjct: 181 VGLVVSINGSPYELNKDDLRLPVVRRRAAESQATIAYVNMVGGQDELVFEGDSMIVAPDG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST----------------------- 264 L + F E + + + D Sbjct: 241 TLLARAPQFVEHLLVHDVQVPPAVDASEVADGDRVGDGLRLVRRTVEGLPPTPDGPAALG 300 Query: 265 -MYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 + P+ +E + A VL LRDYV KN F V++GLSGGIDSA+ AAIAVDALG + V Sbjct: 301 GVIEPVADEAEVWQALVLGLRDYVNKNRFPSVVLGLSGGIDSAVVAAIAVDALGPDRVVG 360 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 + LP +++S S EDAA AK G Y + PI +V+ F + +S SG+ EN+Q Sbjct: 361 VSLPSQHSSEHSREDAADLAKRTGLDYRIEPIQPMVDTFLANLS------LSGVAVENLQ 414 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +R+RG ILMALSN ++LTT NKSE++VGY TLYGD GGFNP+KD++KT V++LA W Sbjct: 415 ARVRGVILMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGFNPIKDVWKTLVWRLAKW 474 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 RN+ G P IP + + K PSAEL P Q D ++LP Y +LD I+ V+ + Sbjct: 475 RNAEAARLGGTP---PIPENSIGKPPSAELSPGQLDSDTLPDYDVLDPILIGYVDGDLGR 531 Query: 504 INNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ V V ++ +EYKRRQ+ GTKI+ K+FGRDR PI+N++R+ Sbjct: 532 DGLVASGHDAAVVDKVLRMVDTAEYKRRQSAPGTKISMKAFGRDRRLPITNRWRE 586 >gi|94969551|ref|YP_591599.1| NH(3)-dependent NAD(+) synthetase [Candidatus Koribacter versatilis Ellin345] gi|94551601|gb|ABF41525.1| NH(3)-dependent NAD(+) synthetase [Candidatus Koribacter versatilis Ellin345] Length = 556 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 212/566 (37%), Positives = 298/566 (52%), Gaps = 39/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q+NP VGD GN K A G ++ILF EL I GYPP DLV + +F+ Sbjct: 10 VKIALGQINPTVGDFVGNAEKIVHYAARARTAGAEVILFPELSICGYPPRDLVERATFVA 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 + + T G +V G V+NS +L G I+ V+ K LP Y Sbjct: 70 HNREIAEAIARMT--VGITVVAGLVTPANGKTGKSVMNSAAVLRDGRIVHVQSKRLLPTY 127 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAEF 170 F E R F + + + ICED W + N + L G + Sbjct: 128 DVFDEMRNFAPADHQELFCQGSTSIALTICEDAWNDKNFWDRRLYGNDPVEDLMVGGGKL 187 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +++ASP+Y K + R +++T H + NQVGG D ++FDG+S + Sbjct: 188 LLNISASPFYVAKQELRRKMLTAIARKYHTVVAMCNQVGGNDSIVFDGSSVVIGPDGSVI 247 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 Q + F E + S+D+ + Y A VL RDYV K Sbjct: 248 AQARSFEEDLIFCDTDALTGDIHPELGSEDANA------------YAALVLGTRDYVGKC 295 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F KVIIGLSGGIDSAL AAIAVDALG ENV + +P Y+S S++DAAA A+ LG ++ Sbjct: 296 GFRKVIIGLSGGIDSALTAAIAVDALGAENVMGVGMPGPYSSQGSIDDAAALAENLGIRF 355 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +++PI D+V F + ++ ENIQ+R RGNILM+LSN AM+L+T NKSE Sbjct: 356 EIVPIGDVVQAFRNTLAPVFSGFHEDTTEENIQARTRGNILMSLSNKFGAMVLSTGNKSE 415 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM+GG + D+ KT V++L+ + N E+IP + + K PS Sbjct: 416 LAVGYCTLYGDMAGGLAVISDVPKTMVYRLSHYVNRG---------REIIPQNTITKPPS 466 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ--EYNDETVRYVEHLLYGSEYK 528 AELRP+Q D +SLP Y +LD I+ VE +S + ++ VR V L+ +EYK Sbjct: 467 AELRPNQKDTDSLPEYEVLDAILDDYVEEMKSAKEIAEAHGFDIALVRRVIALIERTEYK 526 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNK 554 R+QA G KI+ K+FG R +PI+ + Sbjct: 527 RQQAAPGLKISTKAFGVGRRFPIAAR 552 >gi|318059140|ref|ZP_07977863.1| NH(3)-dependent NAD(+) synthetase [Streptomyces sp. SA3_actG] gi|318075637|ref|ZP_07982969.1| NH(3)-dependent NAD(+) synthetase [Streptomyces sp. SA3_actF] Length = 586 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 207/594 (34%), Positives = 309/594 (52%), Gaps = 44/594 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VVGD+ N + A +G L+ F E+ ++GYP EDL + + Sbjct: 1 MPQLRLALNQIDAVVGDLDANADSVVQWTRHAAERGAHLVAFPEMVLTGYPVEDLALRST 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A +A+ L + D G G +V+G+ + + N+ +L G + Sbjct: 61 FVEASRAALHALAARLVDEGLGGLPVVLGYLDRSETDQHRYGMPAGSPRNAAAVLHQGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 VLRFAKHHLPNYGVFDEFRYFVPGDTLPVVRVHGVDVALAICEDLWQDGGRVPATRAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R ++V + YV GGQDEL+FDG S D Sbjct: 181 GLLLSINASPYEREKDDTRLDLVRKRAQEAGCTTAYVAMSGGQDELVFDGDSIVVDKDGS 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWN--------YMSDDSASTMYIPLQEEEAD----- 275 + + F+E F+ + ++ + + S +P E E Sbjct: 241 VITRAPQFTEGCFLLDLDLPPAPAEEPAGTVHDGLRIEHVTISPTPLPAYEPEYTGEYAE 300 Query: 276 --------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 Y A V LR YV+KN F V+IGLSGGIDSAL AAIA DA+G ENV + +P Sbjct: 301 RLEDAEEVYGALVTGLRAYVRKNGFRSVLIGLSGGIDSALTAAIACDAIGAENVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A G Y PI + + + + + +G+ EN+Q+R+R Sbjct: 361 SKYSSEHSKDDAADLAARTGLHYRSAPIAAMFDAYMAALG------FTGLAEENLQARLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LM +SN ++L NKSE++VGY TLYGD G + P+KD+YK+QVF LA WRN Sbjct: 415 GTTLMGISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSQVFALARWRNQA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEE-SFINN 506 G P IP + + K PSAELRP Q D +SLP Y +LD I+ V+ ++ S Sbjct: 475 AEQRGETP---PIPENTIAKPPSAELRPGQVDTDSLPDYDVLDRILAMYVDRDQGSDAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 ++ V V ++ +EYKRRQ P GTKI+AK FG+DR PI+N++R++ Sbjct: 532 AAGFDPAVVARVLRMVDNAEYKRRQYPPGTKISAKGFGKDRRMPITNRWRENAG 585 >gi|126733697|ref|ZP_01749444.1| NAD(+) synthase [Roseobacter sp. CCS2] gi|126716563|gb|EBA13427.1| NAD(+) synthase [Roseobacter sp. CCS2] Length = 553 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 241/559 (43%), Positives = 337/559 (60%), Gaps = 10/559 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L++ +AQLN VGDIAGN AR A EA DL+ E+F++GY +DLV K Sbjct: 1 MTKFLRLTMAQLNATVGDIAGNADLARAAWAEAKAAKADLVALPEMFLTGYQTQDLVAKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ + L D D G + +G P ++E + N+ L G I+A K LPN+ Sbjct: 61 AFVADAMVHLMALAKDCAD-GPALSIGAPLVEEERLYNAYFTLRGGEIVARARKHFLPNF 119 Query: 121 SEFHEKRTFISGYSNDPIVFR-DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + F E R F S P R+G ICED W ++C+ + + GAE L N SPY Sbjct: 120 NVFDEVRLFKSADIEGPYAHNNGARIGHPICEDAW-YPDVCEAMVESGAEILVVPNGSPY 178 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + +K R + ++ +P++Y+N VG QD+ +FDG SF + +LA QM + Sbjct: 179 FRDKFPIRMNNMVSRVIENDVPLVYINLVGAQDDQMFDGGSFVLNRGGKLAVQMPLM--E 236 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + + ++ S W + + A+ I Q+ Y V +LRDY++K F KV++GL Sbjct: 237 SALAHVDFELTDSGWVALDGEKATLPDIIEQD----YRVMVEALRDYMRKTGFKKVLLGL 292 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ AAIA DALG +NV+ +MLP +YTS SL+DAAA A ALGCKYD + I Sbjct: 293 SGGIDSAIVAAIATDALGADNVRCVMLPSEYTSQGSLDDAAAAADALGCKYDTISIAGPR 352 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 ++ + + ENIQSRIRG +LMA SN MLLTT NKSE++VGY T+Y Sbjct: 353 AAVTDALAPLFAGLEADLTEENIQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYATIY 412 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KD+YKT+VF+ A WRN++ GP EVIP +I++K PSAELRP Q D Sbjct: 413 GDMAGGYNPIKDMYKTRVFEAARWRNANHRDWMNGPAGEVIPVAIIDKPPSAELRPDQKD 472 Query: 480 QESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 ++SLPPY +LD I+ +V+ E S N Y+ ETV+ VEHL+Y SEYKR Q+ G ++ Sbjct: 473 EDSLPPYDVLDGILMMLVDGEASVANCAAAGYDRETVKRVEHLIYISEYKRFQSAPGPRL 532 Query: 539 TAKSFGRDRLYPISNKFRD 557 + ++F DR YPI N++RD Sbjct: 533 SDRAFWLDRRYPIVNRWRD 551 >gi|290961002|ref|YP_003492184.1| carbon-nitrogen ligase [Streptomyces scabiei 87.22] gi|260650528|emb|CBG73644.1| putative carbon-nitrogen ligase [Streptomyces scabiei 87.22] Length = 584 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 210/592 (35%), Positives = 312/592 (52%), Gaps = 44/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGDIA N R + QG L+ F E+ ++GYP EDL ++S Sbjct: 1 MPQLRLALNQIDSTVGDIARNAEAVVRWTRHSAEQGAHLVAFPEMVLTGYPVEDLALRQS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A SA+ L + D G G +V+G+ + + N+ +L G + Sbjct: 61 FVEASRSALAALAARLADEGFGELPVVLGYLDRSESAAPKYGQPAGAPRNAGAVLYRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G + + + + + ICED+W++ + GA Sbjct: 121 ALTYAKHHLPNYGVFDEFRYFVPGDTMPVVRLHGVDIALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRHGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIPL------- 269 + + FSE + + D L + + Y P Sbjct: 241 VVARAPQFSEGCVVLDLDLPAGAAEPVTGIVDDGLRVDRLVVSEEPLPAYEPELTGGYAE 300 Query: 270 --QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 ++E Y+A V+ LR Y KN F V+IGLSGGIDSAL AA+A DALG +NV + +P Sbjct: 301 RLDDDEEVYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAALACDALGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + + I + + + + E +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTISIAPMFDAYMAST------ELTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTLLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAEWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP YP+LD I++ V+ ++ Sbjct: 475 AAERGQTP---PIPENSISKPPSAELRPGQVDTDSLPDYPVLDAILELYVDRDQGADAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 ++ E V ++ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDRELVVKTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPITNRWREQ 583 >gi|154488718|ref|ZP_02029567.1| hypothetical protein BIFADO_02025 [Bifidobacterium adolescentis L2-32] gi|154082855|gb|EDN81900.1| hypothetical protein BIFADO_02025 [Bifidobacterium adolescentis L2-32] Length = 565 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 213/579 (36%), Positives = 317/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K R A +QG +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDSNADKVMRYAHLAAQQGAQVVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G +VVG D+E N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELASDSLGELYVVVGTVGTDRETSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L K+ + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVNGARIGVAICEDIWQDGGPVAELAKENIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRLDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFVVDTDGSLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + ++ + Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLSFFDLDTSAEHQKVGTIAAKPDPDEEV--------YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G ENV I +P Y+S S +DAA A+ +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGENVYGISMPSMYSSDGSKDDAADLARNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + + E G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFVSFQNQL------ELEGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----------------NSHGITSGLGPLTEV 459 T+YGD GG+ P+KDL KT+V++++ WR N G P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNEQGSAGTPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + +++ TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAMYIEHAHGRADLLADGFDEATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|67920546|ref|ZP_00514066.1| NAD+ synthase [Crocosphaera watsonii WH 8501] gi|67858030|gb|EAM53269.1| NAD+ synthase [Crocosphaera watsonii WH 8501] Length = 562 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 212/575 (36%), Positives = 320/575 (55%), Gaps = 42/575 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GDI N +A E A + L+L EL + GYPP+DL+ SF++ Sbjct: 1 MKIAIAQLNPIIGDIENNAQNICKAAEIAVQGEAQLLLTPELSLCGYPPKDLLLNASFVE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEG---VLNSVVILDAGNIIAVRDKINL 117 + ++ L T ++VG P EG + NS+V+++ I + K L Sbjct: 61 MLWAELEKLAK-TIPNNLTVLVGTVIENPNAYNEGKKPLFNSIVLIENQTIKQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPI-------VFRDIRLGILICEDIWKNS----------NIC 160 P Y F E R F G ++ + +++G+ ICED+W + N Sbjct: 120 PTYDVFDEDRYFEPGKESNFFQLSSNIPNTKPLKIGVTICEDLWNDEEFWGKRNYENNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L K G + + +L+ASPY K K R ++ +PIIY NQVGG D+LIFDG S Sbjct: 180 QDLVKYGVDLVVNLSASPYSVGKQKIREAMLKHSAERYQVPIIYTNQVGGNDDLIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F + +++ + K + + E+ + + + +Y+++ EEE +++ V Sbjct: 240 FAVSRKGEISLRAKGYQTAIEVIEYDQNNEDLKTSYIANSI-------ETEEEEIWSSLV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DY K F K I+GLSGGIDS+L AAIAV+ALGKENV I++P Y+S S+ D Sbjct: 293 LGLKDYATKCGFSKAILGLSGGIDSSLVAAIAVEALGKENVLGILMPSPYSSSHSISDGE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A LG L I D++ + L+ + G+ EN+QSRIRGN+LMA++N Sbjct: 353 ALVNNLGINSHTLAIGDVMKAYDLLLEPLFKNTEFGVAEENLQSRIRGNLLMAIANKFGH 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H EVI Sbjct: 413 LLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFSLCKWLNRHQ---------EVI 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVE 519 P +I+ K PSAEL+P Q DQ+SLP Y ILD I+ R++ +S ++ +T+ + Sbjct: 464 PHNIIVKPPSAELKPDQLDQDSLPAYDILDAILDRLIHRHQSVKEITAAGFDYDTICKIV 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 L+ +E+KR+QAP G K++ ++FG PI+++ Sbjct: 524 KLVNRAEFKRKQAPPGLKVSDRAFGTGWRMPIASR 558 >gi|256419265|ref|YP_003119918.1| NAD+ synthetase [Chitinophaga pinensis DSM 2588] gi|256034173|gb|ACU57717.1| NAD+ synthetase [Chitinophaga pinensis DSM 2588] Length = 554 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 203/563 (36%), Positives = 307/563 (54%), Gaps = 23/563 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ N +G+ N K + A QG DL++FTEL + GYPP D + FIQ Sbjct: 1 MKIILAQQNYHIGNFELNTQKILEGIKAAEAQGADLVVFTELCVCGYPPRDFLEFDDFIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 +AID +K H ++VG P ++ + + N+ L G + + K LP Y Sbjct: 61 QSYAAIDKIK--AHTSNIAVLVGAPCRNTQPEGKDLFNAAWFLHEGEVKQIIHKTLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-------ICKHLKKQGAEFLFS 173 F E R F GY+ + + F+ +L + ICEDIW + L +Q + + + Sbjct: 119 DVFDEYRYFEPGYAWNVVPFKGKKLAVTICEDIWNLGDNPLYRICPMDQLIEQQPDVMIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 L+ASP+ +N + R +I+ + +P+ Y N VG Q E++FDG S FD Q + ++ Sbjct: 179 LSASPFDYNHAQDRKKIIRENVKKYGIPMYYCNAVGSQTEIVFDGGSVIFDKQGNIVKEL 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 +F E + Q Q +P + Y+A ++ ++DY QK F Sbjct: 239 PYFEEAIEGYDLEVLLQSEQPAPEPAYIPVNELLPEYNIDRIYHAIIMGIKDYFQKMGFT 298 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K I+G SGGIDSA+ A+A +ALGKENV+ I++P Y++ S++DA A +K L YD++ Sbjct: 299 KAILGSSGGIDSAVTLALAAEALGKENVRAILMPSPYSTEHSVDDAVALSKNLDNPYDII 358 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I+D+ F ++ F + P + EN QSRIRGN+LM LSN +LL TSNKSE+S Sbjct: 359 RINDIYETFLQTLNPFFEGRPFNVAEENTQSRIRGNLLMGLSNKFGYILLNTSNKSELST 418 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM+GG L D+YK QV+ LA + N E+IP +I++K+PSAEL Sbjct: 419 GYGTLYGDMAGGLAVLGDVYKMQVYALARYINRD---------KEIIPANIIDKAPSAEL 469 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP+Q D +SLP Y +LD I+ + +E + Q ++ V ++ +EYKR Q Sbjct: 470 RPNQKDSDSLPDYTVLDSILYQYIERRQGPKEIIAQGFDAALVTRTLKMVNTNEYKRNQF 529 Query: 533 PVGTKITAKSFGRDRLYPISNKF 555 ++++K+FG R PI K+ Sbjct: 530 CPIIRVSSKAFGVGRRVPIVGKY 552 >gi|182439051|ref|YP_001826770.1| putative NH3-dependent NAD+ synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779702|ref|ZP_08238967.1| NAD+ synthetase [Streptomyces cf. griseus XylebKG-1] gi|178467567|dbj|BAG22087.1| putative NH3-dependent NAD+ synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660035|gb|EGE44881.1| NAD+ synthetase [Streptomyces cf. griseus XylebKG-1] Length = 584 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 211/591 (35%), Positives = 312/591 (52%), Gaps = 44/591 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLAGNAEAIVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A ++ L + G G +VVG+ + + N+ +L G I Sbjct: 61 FVEASRQSLRALAARLDAEGFGELPVVVGYLDRSEHAAARYGQPAGSPRNAAAVLHRGGI 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G S + I + + ICED+W++ + GA Sbjct: 121 ALNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + + Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDKEGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIPL------- 269 + + FSE + + + D L + + D Y P Sbjct: 241 VIARAPQFSEGSVILDLELPAAGAEAPSGVVDDGLRIDHVVLSDRPVEAYEPELAGGYAE 300 Query: 270 --QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 +EE Y+A V+ LR Y KN F V+IGLSGGIDSA+CAAIA DALG ++V + +P Sbjct: 301 RLGDEEEIYSALVVGLRAYAAKNGFSSVLIGLSGGIDSAICAAIACDALGAQHVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + +PI + + + + E +G+ EN+Q+R+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTVPIEPMFDAYMESL------ELTGLAEENLQARLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA WRN Sbjct: 415 GTTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYEVLDAILELYVDRDQGLDAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ E V ++ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDAELVAKTLRMVDAAEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 582 >gi|254445246|ref|ZP_05058722.1| NAD synthase family [Verrucomicrobiae bacterium DG1235] gi|198259554|gb|EDY83862.1| NAD synthase family [Verrucomicrobiae bacterium DG1235] Length = 546 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 208/566 (36%), Positives = 296/566 (52%), Gaps = 37/566 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+N VGD+AGN A A + QG +L++F EL + GYPP DL+FK+ F+ Sbjct: 1 MKIGLAQINTTVGDLAGNQALILEAYQSLAAQGAELVVFPELAVCGYPPRDLLFKRRFVP 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ + + G V+GF P + N+ G I + K LP Y Sbjct: 61 DQLESLQQIAAQV--GSIPAVIGFVDPNPSKSGRDFYNAAAFCQNGEIQQIGRKTLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIW---------KNSNICKHLKKQGAEFL 171 F E R F + ++G+ ICEDIW ++LK+Q + Sbjct: 119 DVFDEDRYFEPAKLPLVFEWDGKKVGVTICEDIWGNTDISRARYPHAPVEYLKQQNLDLH 178 Query: 172 FSLNASPYYHN-KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 +L+ASP++ K ++R +V+ + P IYVN +GG DELIFDG S + Q+ Sbjct: 179 LNLSASPWHWGGKGEQREGLVSSASKTCNCPTIYVNAIGGNDELIFDGRSMVSNSSGQII 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + FS + + + ++ + A+ +A VL LRDYV K+ Sbjct: 239 AGLAAFSADLAVVDLDSASEAIAPSFRQNLMANIE-----------DALVLGLRDYVHKS 287 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F K +IGLSGGIDSA+ AA+A ALG ENV + LP +S S DA AK LG + Sbjct: 288 GFKKALIGLSGGIDSAVVAALAAKALGPENVTGVSLPSAISSDHSKSDAQDLAKFLGIPF 347 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I D+V+ +S + ENIQ+R RG +LMALSN +LLTT NKSE Sbjct: 348 HTIAIADIVSAAEGTLSPLTAGYGRDVTEENIQARARGLLLMALSNKLGTLLLTTGNKSE 407 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM GG + DL KT+VF+LA + N T IP + +EK PS Sbjct: 408 LAVGYCTLYGDMCGGLAVISDLPKTKVFELARYMNREKPT---------IPVNTIEKPPS 458 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AELRP Q D++SLPPY ILD I++ VE S + +Q Y+ V+ + + +EYKR Sbjct: 459 AELRPDQKDEDSLPPYDILDGILEGYVERGLSSKDLIEQGYDSAVVKDMIRKVDLNEYKR 518 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKF 555 +QA G K+T +FG R PI ++ Sbjct: 519 KQAAPGLKLTPLAFGVGRRIPIVQRY 544 >gi|239940755|ref|ZP_04692692.1| putative NH3-dependent NAD+ synthetase [Streptomyces roseosporus NRRL 15998] gi|239987233|ref|ZP_04707897.1| putative NH3-dependent NAD+ synthetase [Streptomyces roseosporus NRRL 11379] Length = 584 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 212/591 (35%), Positives = 314/591 (53%), Gaps = 44/591 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLAGNSEAIVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A A+ L + G G +VVG+ + + N+ +L G I Sbjct: 61 FVEASRQALRALAARLDTEGFGELPVVVGYLDRSEHAAARYGQPAGSPRNAAAVLHRGGI 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G S + I + + ICED+W++ + GA Sbjct: 121 ALNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQDGGRVPAARSAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + + Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDKEGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIPL------- 269 + + FSE + + + D L + + D Y P Sbjct: 241 VIARAPQFSEGSVILDLELPAAAAVAPSGVVDDGLRIDHVVISDEPVAAYEPELAGGYAE 300 Query: 270 --QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 ++EE Y+A V+ LR Y KN F V+IGLSGGIDSA+CAAIA DALG +NV + +P Sbjct: 301 RLEDEEEIYSALVVGLRAYAAKNGFSSVLIGLSGGIDSAICAAIACDALGAQNVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S +DAA A+ G + +PI + + + + + +G+ EN+Q+R+R Sbjct: 361 SKYSSGHSKDDAAELARRTGLNFRTVPIAPMFDAYMESL------QLTGLAEENLQARLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA WRN Sbjct: 415 GTTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYEVLDAILELYVDRDQGMDAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ E V ++ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDAELVAKTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 582 >gi|282892089|ref|ZP_06300564.1| hypothetical protein pah_c207o013 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497984|gb|EFB40328.1| hypothetical protein pah_c207o013 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 544 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 199/567 (35%), Positives = 304/567 (53%), Gaps = 40/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ+NP++GD+ GN + A E+ + +DL++F EL + GYPPED++ +F++ Sbjct: 1 MRVLLAQINPIIGDLKGNTQQILAAIEKGKQNRIDLMVFPELALCGYPPEDILLLPNFME 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLPNY 120 + T+ S T G +++G PR + + + NS I+ I+ +DK LP Y Sbjct: 61 EVECHLKTIVSQTQ--GIAVLLGLPRSNPDVLEKKLYNSAAIIQDQKILGYQDKQLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAEF 170 F E+R F G + I ICED+W++SN ++L + Sbjct: 119 DVFDERRYFEPGNHTRLWSLCGKNIAITICEDMWQHSNLLKFTNYRQDPIQNLLPLSPDL 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +L+ASP+ +L+ R + + P + NQVGG D LIFDG S D +L Sbjct: 179 LINLSASPFCIGQLRHRFTTICKAAMTLQCPAVLCNQVGGNDSLIFDGHSCFVDNMGRLC 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 K F E + + + E Y+A VL +RDY K+ Sbjct: 239 SVAKGFQEDLHIVDL-------------SEPLPPFEWIESPVEMLYSALVLGVRDYFHKS 285 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +GLSGGIDSAL A IAV+ALG +NV + +P +Y+S SLEDA AK L + Sbjct: 286 GFKHACLGLSGGIDSALVACIAVEALGHQNVLGVAMPSRYSSTGSLEDAKKLAKNLQIEL 345 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +PI + L++ F + +P+ EN+Q+RIRG ILM+LSN ++L+T NKSE Sbjct: 346 LNIPIEGPFQSYLHLLNPFFENKPADATEENLQARIRGMILMSLSNKHGYIVLSTGNKSE 405 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM GG + D+ K +V+ L+ W N + E+IP + + K PS Sbjct: 406 LAVGYSTLYGDMCGGLGVINDVSKQEVYALSKWINRN---------REIIPWNTIHKPPS 456 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEES--FINNDQEYNDETVRYVEHLLYGSEYK 528 AELRP+Q D ++LP Y ILD I+K VE ++ +I + E V+ + ++ +EYK Sbjct: 457 AELRPNQKDSDTLPSYEILDAILKDYVEEHQTPQWIAEKHHFPVELVQSIIRKIHQNEYK 516 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 RRQ+P G ++T K+F R +PI K+ Sbjct: 517 RRQSPPGLRVTEKAFTIGRKFPIVQKW 543 >gi|225352292|ref|ZP_03743315.1| hypothetical protein BIFPSEUDO_03908 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157539|gb|EEG70878.1| hypothetical protein BIFPSEUDO_03908 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 565 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 212/579 (36%), Positives = 317/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K R A +QG +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDSNAGKIMRYVRRAAQQGAQVVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F +A + + L ++ G G +VVG D+E N +V+L G + DK Sbjct: 61 FRKAAWNKANWLATELAADGLGDLFVVVGTVGTDRETSKPRNRLVVLHDGVVWDGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L +Q + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVNGARIGVAICEDIWQDGGPVAELAEQHIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P++Y+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRLDLAVRRAAEVNAPMVYLNQVGGQDDLVFDGGSFVVDADGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + ++ + Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLSFFDLDTTAERQKAGSIAAKPDPDEEV--------YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA AK +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGANVYGISMPSMYSSDGSKDDAADLAKNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFVSFQKQL------DLEGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----------------NSHGITSGLGPLTEV 459 T+YGD GG+ P+KDL KT+V++++ WR N G+ P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNEQGLAGTPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + +++ TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYELLDQVLAMYIEHAHGREDLLADGFDETTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|261337225|ref|ZP_05965109.1| NH3-dependent NAD synthetase [Bifidobacterium gallicum DSM 20093] gi|270277577|gb|EFA23431.1| NH3-dependent NAD synthetase [Bifidobacterium gallicum DSM 20093] Length = 565 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 217/579 (37%), Positives = 312/579 (53%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+IA+AQ++ VG++ N + + A ++ F E+ ++GYP EDL + + Sbjct: 1 MSTLRIALAQIDTCVGNLVTNASTVLAYAKRAAADHARIVAFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFP--RQDQEGVLNSVVILDAGNIIAVRDKIN 116 F QA L G G +VVG D N +V+L G ++A DK Sbjct: 61 FRQAAWDTAADLAQTLQQEGLGDLYVVVGTIGTDHDNGKPRNRLVVLHEGQVVAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +R+G+ ICEDIW+ L QG + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGERSTVLTIDGVRVGVAICEDIWQEGGPVADLAGQGIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ PIIY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKGHIRQELAARRAAEVNAPIIYLNQVGGQDDLVFDGGSFVLDTDGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + + + P +E Y ACVL L+DY+ KN F V Sbjct: 241 MENLSFFTLD-----TNQTRQTPTTIAALPDPDEE---VYTACVLGLKDYMAKNGFTGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A LG Y+V PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLAHNLGAHYEVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + G+ AEN+Q+RIRG I+MA SN + L T NKSE++ GY Sbjct: 353 PLFMAFQDQLH------LEGVSAENLQARIRGVIVMATSNSKNVLALATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----------------NSHGITSGLGPLTEV 459 T+YGD GG+ P+KDL+KT+V+Q+A WR N G + + + Sbjct: 407 TIYGDAVGGYAPIKDLFKTKVWQIARWRNKALTQGMGIGGLNVVGNEDGASGIMPASGVI 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++++TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAAYIEHAHGRADLIADGFDEQTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K++A +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVSALAFGRDRRLPVTNAFRE 565 >gi|289640878|ref|ZP_06473049.1| NAD+ synthetase [Frankia symbiont of Datisca glomerata] gi|289509454|gb|EFD30382.1| NAD+ synthetase [Frankia symbiont of Datisca glomerata] Length = 616 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 215/606 (35%), Positives = 310/606 (51%), Gaps = 51/606 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+AQ++ VGD+A N A R G L+ F E+ ++GYP EDLV ++S Sbjct: 1 MTQLRVALAQVDTTVGDLAANADLVSAWAGRAVRAGAHLVAFPEMTLTGYPAEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGF--------PR--QDQEGVLNSVVILDAGNI 108 F QA +A+D L D GAG +VVG+ PR + N+ +L G + Sbjct: 61 FAQASRAAVDRLARRLADEGAGELAVVVGYLDSSRNPTPRLGRPAGEPQNAAAVLWRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 A K +LPNY F E R F+ GY + + +G+ ICED+W++ + Sbjct: 121 AARYAKHHLPNYGVFDEFRYFVPGYDFPVLRLHGVDVGLTICEDLWQDGGPVAVARAAAV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +N SPY K +R E+ + + YVN VGGQDEL+FDG S D + Sbjct: 181 GLLVCINGSPYERGKAFQRDELAAARAREAGAALAYVNLVGGQDELVFDGGSLVVDADGR 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQL--------------------------------SQWNY 256 + + F+E + + Sbjct: 241 TLARAEQFTETLLTVDLDLPAGALVAGAPVAGPVVTGPVDAGDGTTIAVSRVVLADEPVS 300 Query: 257 MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 + T+ L Y A V RDYV+KN F V++GLSGGIDSAL A IAVDAL Sbjct: 301 PFEAREPTVAQRLDSAAELYAAVVTGTRDYVRKNGFASVVLGLSGGIDSALVATIAVDAL 360 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 G V T+ +P ++S S+ DAA A+ G + V+PI +V+ F ++ +G Sbjct: 361 GAARVHTVAMPSVHSSAGSVADAAELARRTGVTHTVVPIQPVVDAFHDALAGTGG--LAG 418 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 + AEN+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GGF P+KD+ KT Sbjct: 419 LAAENLQARVRGTLLMALSNAHGHLVLTTGNKSELATGFSTLYGDSAGGFAPIKDVPKTL 478 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 V++LA WRN+ G P IP I+ K PSAEL P Q D + LP Y LD ++ Sbjct: 479 VWELARWRNAQAPRDGEAP---PIPEEIIVKPPSAELAPGQLDSDRLPDYSTLDAVLDDY 535 Query: 497 VENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 VE ++ ++ +TV V L +EYKRRQ P G K+T+K+FGRDR PI++ + Sbjct: 536 VERDQGRTELITAGHDPDTVERVIRLADLAEYKRRQNPPGPKVTSKAFGRDRRLPITSHW 595 Query: 556 RDHISE 561 R+ Sbjct: 596 RERTGS 601 >gi|299137866|ref|ZP_07031047.1| NAD+ synthetase [Acidobacterium sp. MP5ACTX8] gi|298600507|gb|EFI56664.1| NAD+ synthetase [Acidobacterium sp. MP5ACTX8] Length = 562 Score = 557 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 211/576 (36%), Positives = 312/576 (54%), Gaps = 43/576 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NP VGD +GN+ K R E A Q DL++F EL I GYPP DL+ K+SF++ Sbjct: 1 MRIALAQINPTVGDFSGNLQKIREFTECAVAQRADLVIFPELAICGYPPADLLEKESFVK 60 Query: 65 ACSSAIDTLKSDTH-DGGAGIVVGFPR----QDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +++ + + T +G I+ G + V N +L+AG I +++ K+ LP Sbjct: 61 RAEASLAEVAALTKGEGRPAILCGAALSVAQPTGKHVRNVAALLEAGEIRSLQQKMLLPF 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQ--- 166 Y F E+R F V + + + +CED W + + + L KQ Sbjct: 121 YDVFDEQRYFEPATHQSLAVVKGQAVALTVCEDAWNDKVFWPRRNYSVDPVEELMKQWAV 180 Query: 167 ------GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 G + +++ASPY+H K++ R ++ H ++ VNQVG D L+FDG S Sbjct: 181 LPQPLGGQRLILNISASPYWHGKVEVRQRMIGALAKRHHATVVLVNQVGANDSLVFDGNS 240 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F ++ Q + F+E + + +D + T + A V Sbjct: 241 FVAGPDGEIVAQARGFAEDLVIFDTDSAPVKVASVPETDAATQT--------SLTWQALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L RDYV+K F K ++GLSGGIDSAL AAIAV+ALG ENVQ I +P +++S S+ DA Sbjct: 293 LGTRDYVRKCGFKKALLGLSGGIDSALVAAIAVEALGAENVQGIGMPSEFSSTGSVSDAE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A+ LG + V+P+ ++ F + F G+ EN+Q RIRG++LMALSN + A Sbjct: 353 KLAQNLGIAFSVVPVREIYTQFSDSLQPFFAGTSFGLAEENLQPRIRGSLLMALSNKTGA 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 ++LTT NKSE++ GY TLYGDM G + D+YKT+V+ L+ + N E+I Sbjct: 413 LVLTTGNKSEMATGYCTLYGDMVGALAVIGDVYKTEVYALSHYANRE---------REII 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND--QEYNDETVRYV 518 P L K PSAELRP Q D +SLPPY +LD I++ +E+ S Q ++ VR V Sbjct: 464 PEDTLTKPPSAELRPGQKDTDSLPPYEVLDPILRAYIEDYVSAEEIAAKQGVDENLVRSV 523 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 L+ SEYKR+QA K++ KSFG R +PI+ K Sbjct: 524 IQLVERSEYKRQQAAPVLKVSKKSFGMGRRFPIAAK 559 >gi|167580208|ref|ZP_02373082.1| NAD synthetase [Burkholderia thailandensis TXDOH] Length = 561 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 225/576 (39%), Positives = 331/576 (57%), Gaps = 34/576 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG----------------VLNSVVILD 104 F A +A+ L + G ++VG P + N+ ++ Sbjct: 60 FYAASDAALAELAAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV 119 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G + K +LPN F EKR F + + ++ G++ICED+W +++ + K Sbjct: 120 GGEVAGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVKFGVVICEDVW-HASAAQLAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF D Sbjct: 179 AAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 G +L +M F E N + E+ + L + + + Y A VL +R Sbjct: 239 GAGELVAKMPQFEEGNAIVEFDGARALPAAIAPALSVEAQV----------YRALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F IIGLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++LT Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFGSIVLT 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ ++IP I Sbjct: 409 TGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGQ----PDIIPERI 464 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLY 523 L ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V L+ Sbjct: 465 LTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRVTRLIK 524 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 INEYKRRQAPVGIRVTHRAFGRDWRYPITSRFVESI 560 >gi|83589417|ref|YP_429426.1| NH(3)-dependent NAD(+) synthetase [Moorella thermoacetica ATCC 39073] gi|83572331|gb|ABC18883.1| NH(3)-dependent NAD(+) synthetase [Moorella thermoacetica ATCC 39073] Length = 577 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 208/587 (35%), Positives = 312/587 (53%), Gaps = 49/587 (8%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQL+P +GDI G++AK R+A EA + G L++F EL ++GYPP DL+ + F++ Sbjct: 1 MRIAMAQLDPTIGDIGGSLAKIRQAVAEARQHGAGLVIFPELAVTGYPPRDLLCRHDFLE 60 Query: 65 ACSSAI-DTLKSDTHDGGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNY 120 A+ + + + + I++G P + + + N+ ++ G + +DK LPNY Sbjct: 61 RVERALAEDIAPLSRE--TAIIIGAPVRGRGNPAFLYNAALLYSGGELCGRQDKSLLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAEF 170 F E R F P+ +RLG+ ICEDIW + + + QGAE Sbjct: 119 DVFDESRYFKPATRRLPVFLEGLRLGLTICEDIWNDKDYWNRQLYDIDPVAEMLAQGAEI 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +++ASPY++ K+ R +++ PI+Y+NQVGG DELIFDG S D + Sbjct: 179 LINISASPYHYGKIALRADMLRSLARKYGRPILYINQVGGNDELIFDGTSLAIDANGNVV 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP---------------------- 268 F+E + + Q + A IP Sbjct: 239 SLAASFAEDLVLLDLERPQAGAALTLKPVKRARPGAIPAGVAPEAGRNETEFLTGEEIVI 298 Query: 269 LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 ++ Y A VL + DY+ K F K ++GLSGGIDS++ AA+A A+G ENV + +P Sbjct: 299 SEDISYVYRALVLGIADYLHKTGFRKALVGLSGGIDSSVTAALAAAAMGPENVLGVAMPS 358 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +Y+SP S DA A LG + +PI + + M+ + EN+Q+RIRG Sbjct: 359 RYSSPGSRSDARKLAANLGIAFREIPIEGMFKAYLEAMNGG-GPPRGDLAEENVQARIRG 417 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 NILM +SN + LTT NKSE++VGY TLYGDMSGG L D+ K V+ LA + N Sbjct: 418 NILMFISNREGYLTLTTGNKSEMAVGYCTLYGDMSGGLAVLADVPKVMVYDLARYINRD- 476 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND- 507 E+IP +L K PSAELRP Q DQ+SLPPY +LD I++ +E E+S Sbjct: 477 --------REIIPADVLVKPPSAELRPGQVDQDSLPPYEVLDAILQAYIEEEKSAEEIAG 528 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 + ++ + VR + + +EYKRRQA G ++T+K+FG R PI+ + Sbjct: 529 RGFDLDLVREIIRKVDRAEYKRRQAAPGLRVTSKAFGMGRRMPIAWR 575 >gi|116626533|ref|YP_828689.1| NH(3)-dependent NAD(+) synthetase [Candidatus Solibacter usitatus Ellin6076] gi|116229695|gb|ABJ88404.1| NH(3)-dependent NAD(+) synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 544 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 213/562 (37%), Positives = 306/562 (54%), Gaps = 35/562 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q+NP GD+ GN + RA A QG DL+ EL + GY P DL+ + F++ Sbjct: 1 MRLALLQINPTAGDLEGNSSLIIRAARSAEAQGADLMATPELALMGYLPRDLLMNQGFVR 60 Query: 65 ACSSAIDTLKSDTHDGG---AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + D G+ P + NS V+L G++ K LP Y Sbjct: 61 RGCERLSQIAKELKDAPPLLVGVATPNPSDVGRPLYNSAVLLQNGSVGPAFHKSLLPTYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEFL 171 F E R F + + ++LGI ICED+W + + + L + GA+ + Sbjct: 121 VFDEDRYFEPYHGAQILELNGVKLGISICEDVWNDRDFWQRRRYHQDPIEELAQAGAQAI 180 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +L+ASP+ K + R ++ LP+ VNQVG D+LIFDG S FD Q +L Sbjct: 181 LNLSASPFSVGKQELRERMLGHMAQKYGLPVTIVNQVGANDDLIFDGRSAAFDAQGRLFA 240 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + K F E + D S+ DD I +NA VL +RDY +K Sbjct: 241 RAKGFQEDVLLV----DLLGSEGTVAPDDFTPEAEI--------WNALVLGVRDYARKTR 288 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV++GLSGGIDSAL AAIA DA+G ENV +M+P Y+S S++D+ A+ LG + Sbjct: 289 FRKVLLGLSGGIDSALTAAIAADAMGPENVLGVMMPSVYSSQGSVDDSVELARNLGIQTM 348 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 LPI ++ + +++ + ENIQSRIRGN+LMALSN ++LLTT NKSE+ Sbjct: 349 KLPIGGIMKTYDGVLADAFAGLKPDVTEENIQSRIRGNLLMALSNKFGSLLLTTGNKSEM 408 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 SVGY TLYGDM+GG + DL K V++++ WRN G IP S + K PSA Sbjct: 409 SVGYCTLYGDMNGGLAVIADLPKMMVYRVSRWRNLRGPA---------IPESTITKPPSA 459 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRR 530 ELRP QTDQ+SLPPY +LD+I++ VE +S Q Y+++TVR V L+ +E+KR+ Sbjct: 460 ELRPDQTDQDSLPPYELLDEILELHVEQCQSAEEIIAQGYDEQTVRRVLRLVRIAEFKRK 519 Query: 531 QAPVGTKITAKSFGRDRLYPIS 552 QA K+T+++FG PI Sbjct: 520 QAAPVLKVTSRAFGTGWRMPIV 541 >gi|52840971|ref|YP_094770.1| glutamine dependent NAD+ synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296761|ref|YP_123130.1| hypothetical protein lpp0800 [Legionella pneumophila str. Paris] gi|52628082|gb|AAU26823.1| glutamine dependent NAD+ synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750546|emb|CAH11948.1| hypothetical protein lpp0800 [Legionella pneumophila str. Paris] Length = 536 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 216/557 (38%), Positives = 294/557 (52%), Gaps = 27/557 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L I +AQ+NP VG I N K + ++ D+I+F EL +SGYP EDL+F+K Sbjct: 1 MNAPLTILMAQINPTVGAIDANTKKIIDVIQN-HQANHDVIIFPELTLSGYPAEDLLFRK 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + ++ T D ++VG P N I G I K LPNY Sbjct: 60 EYHDKIMLNLQDIQDTTKD--CYVIVGHPMIHIGDCYNGFSIFYQGEKIRAYHKQKLPNY 117 Query: 121 SEFHEKRTFISGY-SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E R F G + ++ +LG ICED+W+ L G L SLNASP+ Sbjct: 118 GVFDEARYFTPGKKDPCVLSIKNHKLGFCICEDLWQ-KGPVDDLLDSGISILISLNASPF 176 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K + R E++ + IIYVNQ+GGQD+L+FDG S D Q + F E Sbjct: 177 DYRKYQLREELLRSYAKR-GVYIIYVNQIGGQDDLLFDGQSLAMDNQGIIRALAPAFEES 235 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ D A Y A V RDYV+KNNF V++GL Sbjct: 236 LCTVNIDGNKIDGSSTPYLDKEA-----------LIYKALVCGTRDYVRKNNFPGVLLGL 284 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALG E V +++P +YT+ S EDA L + ++PI + Sbjct: 285 SGGIDSALTLAIAVDALGAEQVHAVLMPSRYTASISNEDALEQLSNLKVAHSIIPIEPMF 344 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + ++ P ENIQ+RIRG +LMALSN + M+LTTSNKSE +VGY TLY Sbjct: 345 QSMIESLHPVFKDLPPDTTEENIQARIRGMLLMALSNKTGKMVLTTSNKSETAVGYATLY 404 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF LKD+ KTQV++L +RN ++ VIP ++ + PSAEL+P+QTD Sbjct: 405 GDMAGGFAVLKDVLKTQVYELVRYRNK---------ISLVIPERVITRPPSAELKPNQTD 455 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y LD II +E S + + + V + L+ +EYKRRQA G KI Sbjct: 456 QDSLPEYGELDAIIMAYMEQNLSPSEIIAKGFKPQVVNKIIQLIKRNEYKRRQAAPGIKI 515 Query: 539 TAKSFGRDRLYPISNKF 555 + +FG+D YPI+N F Sbjct: 516 SNLAFGKDWRYPITNGF 532 >gi|149176976|ref|ZP_01855585.1| NAD+ synthetase [Planctomyces maris DSM 8797] gi|148844231|gb|EDL58585.1| NAD+ synthetase [Planctomyces maris DSM 8797] Length = 558 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 228/572 (39%), Positives = 331/572 (57%), Gaps = 38/572 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLNP VGD++GN K A + G+DL+LF EL + GYPP+D++ ++ FI+ Sbjct: 1 MKIALAQLNPTVGDLSGNCQKILETVNRAEQSGVDLVLFPELVLCGYPPKDILLREGFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ---EGVLNSVVILDAGNIIAVRDKINLPNYS 121 AC A+D L + + G+V+G P + N+ +L G I + K+ LPNY Sbjct: 61 ACDHAVDRLAAQL-NPDIGVVIGHPTGRDLPQGRIANAASLLFQGKIDSQIHKLLLPNYD 119 Query: 122 EFHEKRTFISGY--SNDPIVFRDIRLGILICEDIW-------------KNSNICKHLKKQ 166 F E+R F P+ FR+++LG+ ICED W + + K L + Sbjct: 120 VFDEQRYFRHADLKQIKPVSFRELKLGLHICEDAWWGQADTFYHNQPFELPDPVKILAEA 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 G++ L +++ASP+ +K K+R EIV +P ++VNQVGG D+L+FDG SF D Sbjct: 180 GSDLLVNISASPFEIDKRKRRGEIVGAHRDRYSIPYLFVNQVGGNDDLVFDGHSFVMDAA 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 L QM F E E S D L EE + A VL LRDY Sbjct: 240 GDLVLQMPGFREDLQFYE----------TGQSVDRGPGESDDLSREEQLFEALVLGLRDY 289 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +QK F ++GLSGGIDSAL AIA +A+G E V ++LP +Y+S S+ D+ A+ L Sbjct: 290 IQKCGFTDCVLGLSGGIDSALACAIAAEAIGPERVHALLLPSRYSSDHSVADSLELAENL 349 Query: 347 GCKYDVLPIHDLVNHFFSL--MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 G Y+ +PI + F +L + L+ EP+G+ +N+Q+RIRG +M SN M L Sbjct: 350 GLDYETIPIDSVHLAFENLPVIGDDLKLEPAGLADQNLQARIRGANVMVRSNQHGWMALA 409 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE+++GY TLYGDM+GGF L D++K V+++A + N VIP +I Sbjct: 410 TGNKSELAMGYCTLYGDMAGGFAVLSDVFKCDVYRVARYVNQRAGR-------IVIPENI 462 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYG 524 LEK+PSAEL P+Q DQ+SLPPY +LD I+K ++E+E S + +EY ETVR+V L Sbjct: 463 LEKAPSAELAPNQVDQDSLPPYDLLDGILKGLIEDERSVKSLSKEYPPETVRWVAGRLDR 522 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +E+KRRQ P G K++A++FG R P++ +F+ Sbjct: 523 NEFKRRQMPPGIKLSARAFGSGRRMPMAARFQ 554 >gi|258404559|ref|YP_003197301.1| NAD+ synthetase [Desulfohalobium retbaense DSM 5692] gi|257796786|gb|ACV67723.1| NAD+ synthetase [Desulfohalobium retbaense DSM 5692] Length = 548 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 211/569 (37%), Positives = 302/569 (53%), Gaps = 39/569 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q NP++GDI GN+ RA E A QG L L EL ++GYPP DL+ ++ +Q Sbjct: 1 MRLALVQNNPIIGDIHGNMQALVRAGERAFAQGARLALAPELALTGYPPRDLLLNEAVLQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ-------EGVLNSVVILDAGNIIAVRDKINL 117 + A++ L + G V+G P + GV N V+L+ G + V K L Sbjct: 61 SAWRAVEELAARLPT-GLAFVLGTPLRTDNAPELPEGGVYNGAVLLEGGAVRQVFAKTLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQG 167 P Y F E R F G R G+ ICED W ++ + L QG Sbjct: 120 PTYDVFDETRYFSPGPGPGVFELDGWRFGVTICEDAWNDKDFWKKHRYPADPVEELATQG 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + L +L+ASP+ K + R E+ +P+ + NQVGG D+L+F G S D Sbjct: 180 IDGLINLSASPFSLGKHRVREEMFASLAHKYAVPLYFANQVGGNDDLVFPGRSLALDASG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 Q+ + + F E + E + S + + A VL RDYV Sbjct: 240 QVIGRGRGFVEDLVIVE------------QTPGSGPLPADDFERPAEAWAAVVLGTRDYV 287 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +K+ F K ++GLSGG+DSALCAA+AV+ALG ENV +++P YTS S+EDA A A LG Sbjct: 288 RKSGFSKALLGLSGGVDSALCAAVAVEALGAENVLGVLMPSPYTSAASIEDAQALADTLG 347 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 VLPI ++N F + + ENIQSRIRGN+LMALSN ++LLTT N Sbjct: 348 IAQQVLPIEPVMNAFEETLRPAFTGYTPDVTEENIQSRIRGNLLMALSNKYGSLLLTTGN 407 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 KSE++VGY T+YGDM+G + D+ KT V+++ W N EV+P IL+K Sbjct: 408 KSELAVGYCTIYGDMAGALGVIADMPKTLVYEVCRWLNR--------ERGEVVPQRILDK 459 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSE 526 +PSAELRP Q D +SLP Y LD ++ +V+ S + Y+ R V+ L+ +E Sbjct: 460 APSAELRPDQKDSDSLPDYATLDGLLGLLVDRHYSVEQCVEAGYDAGMAREVQRLVRRAE 519 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +KRRQAP G KIT ++FG P++ ++ Sbjct: 520 FKRRQAPPGIKITDRAFGTGWRMPLAARW 548 >gi|229817481|ref|ZP_04447763.1| hypothetical protein BIFANG_02744 [Bifidobacterium angulatum DSM 20098] gi|229785270|gb|EEP21384.1| hypothetical protein BIFANG_02744 [Bifidobacterium angulatum DSM 20098] Length = 565 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 217/579 (37%), Positives = 312/579 (53%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ GN K + A ++ F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDGNADKVLQYARIAASNHARVVAFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFP--RQDQEGVLNSVVILDAGNIIAVRDKIN 116 F A + + L ++ G G +VVG ++ LN +V+L G + A DK Sbjct: 61 FRTAAWNKANWLATELEADGLGDLFVVVGTVGTDREHGKPLNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + + +G+ ICEDIW++ L ++G + L ++N Sbjct: 121 LPNYGVFDEFRIFTPGNKSVVLDIDGVNVGVAICEDIWQDGGPVAELAERGIDVLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R + + + V P+IYVNQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRLALAQRRAAEVGAPLIYVNQVGGQDDLVFDGGSFVVDADGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E AST+ L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MENLSYINL--------NTAADKQLASTIVDKLDPDEEVYTACVLGLKDYMAKNHFTGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G NV I +P Y+S S +DAA A+ LG YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGGNVHGISMPSMYSSDGSKDDAADLAENLGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFTAYQHQLH------LDGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-GLGPLTEV---------------- 459 T+YGD GG+ P+KDL KT+V++L+ WRN G+G L V Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWELSRWRNRAAAEGMGIGGLKIVGNEQGGAGVPLKNGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E + +++ TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEKAHGRADLLADGFDEATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI++ FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITSAFRE 565 >gi|171319130|ref|ZP_02908251.1| NAD+ synthetase [Burkholderia ambifaria MEX-5] gi|171095650|gb|EDT40609.1| NAD+ synthetase [Burkholderia ambifaria MEX-5] Length = 572 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 223/587 (37%), Positives = 327/587 (55%), Gaps = 45/587 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG------------------------- 95 F A ++A+D L G ++VG P + Sbjct: 60 FYAAAAAALDALADALRPFDGLAVLVGHPLRGPGSDPGDDACAPAVDGNANRPIERGVPP 119 Query: 96 --VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 N+V ++ G I K +LPN F EKR F + ++ G++ICED Sbjct: 120 ADTYNAVSLIVGGEIAGTYRKQDLPNADVFDEKRYFATDAQPLVFELNGVKFGVIICEDA 179 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDE Sbjct: 180 W-HASAAQIAKAAGAQVLLIPNGSPYHMNKEALRIDILRARIRETGLPMVYVNLVGGQDE 238 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEE 273 L+FDG SF D Q L +M F E + + E+ A +P+ + Sbjct: 239 LVFDGGSFVLDAQGALVAKMPQFDEGHAIVEFD--------GAHPLPGAVAPALPVDAQV 290 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ Sbjct: 291 --YRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTAD 348 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMA Sbjct: 349 ISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALADEFAGRAEDATEENIQARIRGTLLMA 408 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 409 LSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATADYG-- 466 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYND 512 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + Sbjct: 467 --LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAE 524 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 ADVARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 571 >gi|294056440|ref|YP_003550098.1| NAD+ synthetase [Coraliomargarita akajimensis DSM 45221] gi|293615773|gb|ADE55928.1| NAD+ synthetase [Coraliomargarita akajimensis DSM 45221] Length = 547 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 209/567 (36%), Positives = 292/567 (51%), Gaps = 38/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI IAQ+N VGD+AGN A ++ +G +LILF EL + GYPP DL+FK F+ Sbjct: 1 MKIGIAQINTTVGDLAGNKQLILDAYQQLVTEGAELILFPELAVCGYPPRDLLFKSRFVS 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPR-----QDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + + + + A V+GF N+ +AG + V K LPN Sbjct: 61 DTEACLLEIAKEISSTPA--VIGFVENRPEVATGRPFYNAAAWCEAGEVKTVGRKSLLPN 118 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAE 169 Y F E+R F ++ I +G+ ICEDIW + + L Q + Sbjct: 119 YDVFDEERYFEPADGPAIYHWKGINVGLTICEDIWMHPDIPTSRRYCTDPVDMLAGQKID 178 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L +L+ASP++ K + R +V + P +Y N VGG DELIFDG S ++ L Sbjct: 179 LLLNLSASPWHAGKNEAREPLVQDAADRCNCPAVYCNAVGGNDELIFDGGSLVAHHERGL 238 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F + + ++ +A+T ++A VL LRDY K Sbjct: 239 VAGLAAFRTDLRVVDLEVSNGNVSEHFNLTGNAAT-----------HDALVLGLRDYAHK 287 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + F K +IGLSGGIDSA+ A+A +A G ENV I LP +S S +DAA A+ LG + Sbjct: 288 SGFRKALIGLSGGIDSAVVCALAAEAFGPENVIGIALPSAISSQHSRDDAAGLAQNLGIE 347 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 Y + I D V S + + + + ENIQ+R RG +LMA+SN A+LLTT NKS Sbjct: 348 YHEVAIADTVAAAESALGPLFEGRTADVTEENIQARARGLLLMAMSNKFGALLLTTGNKS 407 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 EISVGY TLYGDM GG + DL K +V+ LA + N E+IP + ++K P Sbjct: 408 EISVGYCTLYGDMCGGLAVISDLPKMKVYALARYINRE---------REIIPVNTIDKPP 458 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP Q D++SLPPYP+LD I++ VE S Q Y+ + V + +EYK Sbjct: 459 SAELRPDQKDEDSLPPYPVLDGILRLYVEKGLSRTEIIAQGYDADIVNDIVRKTDLNEYK 518 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R+QA G K T +FG R PI K+ Sbjct: 519 RKQAAPGLKTTPLAFGVGRRIPIVQKY 545 >gi|170701246|ref|ZP_02892214.1| NAD+ synthetase [Burkholderia ambifaria IOP40-10] gi|170133839|gb|EDT02199.1| NAD+ synthetase [Burkholderia ambifaria IOP40-10] Length = 576 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 224/591 (37%), Positives = 326/591 (55%), Gaps = 49/591 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG------------------------- 95 F A ++A+DTL G ++VG P + Sbjct: 60 FYAAAAAALDTLADALRPFDGLAVLVGHPLRGPGRGAGSELRDDAHAPAVDGNANRPIER 119 Query: 96 ------VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILI 149 N+V ++ G I K +LPN F EKR F + ++ G++I Sbjct: 120 GVPPADTYNAVSLIVGGEIAGTYRKQDLPNADVFDEKRYFATDAEPLVFELNGVKFGVII 179 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 CED W +++ + K GA+ L N SPY+ NK R + + +I LP++YVN VG Sbjct: 180 CEDAW-HASAAQIAKAAGAQVLLIPNGSPYHMNKEALRIDTLRARIRETGLPMVYVNLVG 238 Query: 210 GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL 269 GQDEL+FDG SF D Q L +M F E + + E+ + + L Sbjct: 239 GQDELVFDGGSFVLDAQGALVAKMPQFDEGHAIVEFD----------GARPLPGAVAPAL 288 Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 + Y A V +RDYV KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P + Sbjct: 289 PVDAQVYRALVTGVRDYVGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSR 348 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 YT+ S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG Sbjct: 349 YTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALADEFAGRAEDATEENIQARIRGT 408 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V+QL +RN+ Sbjct: 409 LLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYQLCRYRNASAD 468 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQ 508 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 469 YG----LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAA 524 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 GYAEADVARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 575 >gi|212715673|ref|ZP_03323801.1| hypothetical protein BIFCAT_00573 [Bifidobacterium catenulatum DSM 16992] gi|212661040|gb|EEB21615.1| hypothetical protein BIFCAT_00573 [Bifidobacterium catenulatum DSM 16992] Length = 565 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 213/579 (36%), Positives = 313/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K R A +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDSNADKVMRYAHLAANNNAQVVVFPEMTLTGYPIEDLALRAT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F +A + + L ++ G G +VVG D+E N +V+L G + A DK Sbjct: 61 FRKAAWNKANWLATELAADGLGDLFVVVGTVGTDRETSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L +Q + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVDGARIGVAICEDIWQDGGPVAELAEQHIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRLDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFVVDADGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + Q ++ + Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLSFFDLDTAAEHQQVGVIAAKPDPDEEV--------YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA AK +G YDV PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGSNVYGISMPSMYSSDGSKDDAADLAKNIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L F + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFVSFQKQL------DLEGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL-----------------GPLTEV 459 T+YGD GG+ P+KDL KT+V++++ WRN P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAEGMGIGGLHVVGNEQGSKGTPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + +++ TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYELLDQVLAMYIEHAHGREDLLADGFDETTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|167561982|ref|ZP_02354898.1| NAD synthetase [Burkholderia oklahomensis EO147] Length = 566 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 228/581 (39%), Positives = 332/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAARAAHDAGAQLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDGGAG-IVVGFPRQDQEG---------------------VLNS 99 F A +A+ L + ++VG P++ N+ Sbjct: 60 FYAASDAALAELAALLKPLAGLAVLVGHPQRAAGSGASSADGNANRPIERGVSPTDTYNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + ++ G++ICED+W +++ Sbjct: 120 ASLIVDGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVKFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP+IYVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMIYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E N + E+ + + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGNAVVEFD----------GARPLPARIAPELSVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL + DY+ KN F IIGLSGG+DSAL A+AVDALG + V+ +M+P +YT+ S DA Sbjct: 289 VLGVHDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGADRVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 AA AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 AAMAKRVGVRYDEIAIAPMFDAFRTSLAGEFAGRAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGKL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFTESI 565 >gi|270157431|ref|ZP_06186088.1| glutamine-dependent NAD(+) synthetase [Legionella longbeachae D-4968] gi|289164176|ref|YP_003454314.1| glutamine dependent NAD+ synthetase [Legionella longbeachae NSW150] gi|269989456|gb|EEZ95710.1| glutamine-dependent NAD(+) synthetase [Legionella longbeachae D-4968] gi|288857349|emb|CBJ11177.1| glutamine dependent NAD+ synthetase [Legionella longbeachae NSW150] Length = 535 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 223/560 (39%), Positives = 314/560 (56%), Gaps = 27/560 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M KL + +AQ+NP VG + N K + D+I+F EL ++GYPPEDL+F+K Sbjct: 1 MQNKLTVLMAQINPTVGALTSNRDKIIEIIKSQQLNH-DIIIFPELALTGYPPEDLLFRK 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q + + +++ T D +++G P Q+++ NSV I G A K LPNY Sbjct: 60 EFQQKVNENLHLIQTITED--CHVLIGHPSQEKQHRYNSVSIFYQGQKAAEYHKQILPNY 117 Query: 121 SEFHEKRTFISGY-SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + F E R F G + + ++G++ICED+W+ + L + G L LNASP+ Sbjct: 118 AIFDEVRYFNPGKKNPCILEINHYKVGVIICEDLWQP-GPAEDLIEHGISVLLVLNASPF 176 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 ++K KR ++ + IIYVNQVGGQDEL+FDG S D Q +++ + F E Sbjct: 177 DYSKYPKREALLRSYAKR-GISIIYVNQVGGQDELLFDGQSIAIDSQGRISARGTAFQEN 235 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 E +Q + + ++ A Y A V RDYV KN F V++GL Sbjct: 236 LSTVEIQGNQIKGLVSPLLENEA-----------LLYEALVCGTRDYVNKNQFPGVLVGL 284 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALG + +++P +YT+ S EDA K L + +L I Sbjct: 285 SGGIDSALTLAIAVDALGADRAHAVLMPSRYTAQMSNEDALIQIKHLQVSHSILSIESAF 344 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + + + ENIQ+RIRG ++MALSN + M+L+TSNKSE +VGY TLY Sbjct: 345 EALIATLEPLFRGLTPDTTEENIQARIRGLLIMALSNKTGKMVLSTSNKSESAVGYATLY 404 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF LKD+ KTQV+ LA +RNS ++ VIP +L ++PSAELRP QTD Sbjct: 405 GDMAGGFAVLKDVLKTQVYALARYRNS---------ISTVIPERVLTRAPSAELRPDQTD 455 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y LD II +E S Q + ETV V L+ +EYKRRQ+P G KI Sbjct: 456 QDSLPEYAELDAIIVGYMEQNLSPEEIIQQGFAPETVAKVIQLIKHNEYKRRQSPPGIKI 515 Query: 539 TAKSFGRDRLYPISNKFRDH 558 + ++FG+D YPI+N F++ Sbjct: 516 SPRAFGKDWRYPITNGFKNQ 535 >gi|134296598|ref|YP_001120333.1| NAD synthetase [Burkholderia vietnamiensis G4] gi|134139755|gb|ABO55498.1| DNA-directed RNA polymerase, subunit H [Burkholderia vietnamiensis G4] Length = 570 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 223/585 (38%), Positives = 328/585 (56%), Gaps = 43/585 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHDDGAHLMIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG------------------------- 95 F A ++A+D L + G ++VG P + G Sbjct: 60 FYTAAAAALDALADALREFNGLAVLVGHPLRSAAGEAAGGEPAVDGNANRPIERGVPPVD 119 Query: 96 VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK 155 N+ ++ G I+ K +LPN F EKR F + ++ G++ICED W Sbjct: 120 TYNAASLIVGGKIVGTYRKQDLPNADVFDEKRYFATDTEPLVFELNGVKYGVIICEDAW- 178 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+ Sbjct: 179 HASAAQIAKAAGAQVLLIPNGSPYHMNKEALRIDILRARIRETGLPMVYVNLVGGQDELV 238 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD 275 FDG SF DG L +M F E + + E+ + + L + Sbjct: 239 FDGGSFVLDGDGVLVAKMPLFDEGHAIVEFD----------GARPLPGAIAPELPVDAQV 288 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S Sbjct: 289 YRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADIS 348 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMALS Sbjct: 349 TTDAAEMARRVGVRYDEIAIAPMFDAFRAALAGEFAGRAEDATEENIQARIRGTLLMALS 408 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N +++LTT NKSE++VGY TLYGDM+GGF +KD+ KTQV+QL +RN+ Sbjct: 409 NKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTQVYQLCRYRNATPDYGT--- 465 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDET 514 +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + Sbjct: 466 -RDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLGEIVAAGYAEAD 524 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 VARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERV 569 >gi|291444194|ref|ZP_06583584.1| NH(3)-dependent NAD(+) synthetase [Streptomyces roseosporus NRRL 15998] gi|291347141|gb|EFE74045.1| NH(3)-dependent NAD(+) synthetase [Streptomyces roseosporus NRRL 15998] Length = 601 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 212/590 (35%), Positives = 313/590 (53%), Gaps = 44/590 (7%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + SF Sbjct: 19 PQLRLALNQIDSTVGDLAGNSEAIVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSSF 78 Query: 63 IQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNII 109 ++A A+ L + G G +VVG+ + + N+ +L G I Sbjct: 79 VEASRQALRALAARLDTEGFGELPVVVGYLDRSEHAAARYGQPAGSPRNAAAVLHRGGIA 138 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAE 169 K +LPNY F E R F+ G S + I + + ICED+W++ + GA Sbjct: 139 LNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQDGGRVPAARSAGAG 198 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + ++ Sbjct: 199 LLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDKEGEV 258 Query: 230 AFQMKHFSEQNFMTEWHY------------DQQLSQWNYMSDDSASTMYIPL-------- 269 + FSE + + + D L + + D Y P Sbjct: 259 IARAPQFSEGSVILDLELPAAAAVAPSGVVDDGLRIDHVVISDEPVAAYEPELAGGYAER 318 Query: 270 -QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 ++EE Y+A V+ LR Y KN F V+IGLSGGIDSA+CAAIA DALG +NV + +P Sbjct: 319 LEDEEEIYSALVVGLRAYAAKNGFSSVLIGLSGGIDSAICAAIACDALGAQNVYGVSMPS 378 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 KY+S S +DAA A+ G + +PI + + + + + +G+ EN+Q+R+RG Sbjct: 379 KYSSGHSKDDAAELARRTGLNFRTVPIAPMFDAYMESL------QLTGLAEENLQARLRG 432 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA WRN Sbjct: 433 TTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDAVGAYGPIKDVYKSSVFRLAKWRNRAA 492 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-D 507 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 493 EERGQTP---PIPEASITKPPSAELRPGQVDTDSLPDYEVLDAILELYVDRDQGMDAIVA 549 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ E V ++ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 550 AGFDAELVAKTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 599 >gi|126660538|ref|ZP_01731644.1| NAD synthetase [Cyanothece sp. CCY0110] gi|126618181|gb|EAZ88944.1| NAD synthetase [Cyanothece sp. CCY0110] Length = 562 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 209/577 (36%), Positives = 320/577 (55%), Gaps = 42/577 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP++GDI N +A + A + L+L EL + GYPP+DL+ SF++ Sbjct: 1 MKIAIAQLNPIIGDIENNAQNIYKAAQIAVEKNAQLLLTPELSLCGYPPKDLLLNASFVK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG----FPRQDQEG---VLNSVVILDAGNIIAVRDKINL 117 + + L + + ++VG P +EG + NS+++++ I + +K L Sbjct: 61 NTWTQLQELANKLPN-NLAVLVGTVTENPHAYREGEKPLFNSIILIENQAIKQIFNKRLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRL-------GILICEDIWKNS----------NIC 160 P Y F E R F G ++ G+ +CED+W + N Sbjct: 120 PTYDVFDEDRYFEPGKESNFFQLSSRISSIKSIKIGVTVCEDLWNDEEFWGKRNYQTNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L G + +L+ASPY K K R ++ ++PIIY NQVGG D+LIFDG S Sbjct: 180 QDLVNNGVNLVVNLSASPYSIGKQKIREAMLKHTAKRHNIPIIYTNQVGGNDDLIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F + + ++A + K F + E+ + Q + +Y++D + E + A V Sbjct: 240 FAVNRKGEIALRAKGFQTAIEIIEYEENSQDLKVSYIADSIETKE-------EEIWLALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DY K F K ++GLSGGIDS+L AAIAV+ALGKENV I++P Y+S S+ DA Sbjct: 293 LGLKDYAHKCGFSKAVLGLSGGIDSSLVAAIAVEALGKENVLGILMPSPYSSTHSIRDAE 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A L + L I D++ + SL+ Q G+ EN+QSRIRGN+LMA++N Sbjct: 353 ALVNNLEINSNTLAIGDVMKAYDSLLEPLFQGTEFGVAEENLQSRIRGNLLMAVANKFGH 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H EVI Sbjct: 413 LLLSTGNKSEMAVGYCTLYGDMNGGLAVISDVPKTRVFSLCKWLNRHQ---------EVI 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVE 519 P +++ K PSAEL+P Q D++SLP Y ILD I+ R++ +S + ++ + + V Sbjct: 464 PHNVIIKPPSAELKPDQVDEDSLPSYDILDAILDRLIHRHQSIKEIEADGFDHDIICKVV 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KR+QAP G K++ ++FG PI+++++ Sbjct: 524 KLVTRAEFKRKQAPPGLKVSDRAFGTGWRMPIASRWQ 560 >gi|116619755|ref|YP_821911.1| NH(3)-dependent NAD(+) synthetase [Candidatus Solibacter usitatus Ellin6076] gi|116222917|gb|ABJ81626.1| NH(3)-dependent NAD(+) synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 544 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 212/562 (37%), Positives = 305/562 (54%), Gaps = 35/562 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q+NP GD+ GN + RA A QG DL+ EL + GY P DL+ + F++ Sbjct: 1 MRLALLQINPTAGDLEGNSSLIVRAARSAEAQGADLMATPELALMGYLPRDLLMNQGFVR 60 Query: 65 ACSSAIDTLKSDTHDGG---AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + + D G+ P + NS V+L G++ K LP Y Sbjct: 61 RGCEKLSQIAKELKDAPPLLVGVATPNPSDVGRPLYNSAVLLQNGSVGPAFHKSLLPTYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK----------NSNICKHLKKQGAEFL 171 F E R F + + ++LGI ICED+W + + + L + GA+ + Sbjct: 121 VFDEDRYFEPYHGAQILELNGVKLGISICEDVWNDRDFWQRRRYHQDPIEELAQAGAQAI 180 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +L+ASP+ K + R ++ LP+ VNQVG D+LIFDG S FD Q +L Sbjct: 181 LNLSASPFSVGKQELRERMLGHMARKYGLPVTIVNQVGANDDLIFDGRSAAFDAQGRLFA 240 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + K F E + D + DD I +NA VL +RDY +K Sbjct: 241 RAKGFQEDVLLV----DLLGGEGTVAPDDFTPEAEI--------WNALVLGVRDYARKTR 288 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F KV++GLSGGIDSAL AAIA DA+G ENV +M+P Y+S S++D+ A+ LG + Sbjct: 289 FRKVLLGLSGGIDSALTAAIAADAMGPENVLGVMMPSVYSSQGSVDDSVELARNLGIQTM 348 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 LPI ++ + +++ + ENIQSRIRGN+LMALSN ++LLTT NKSE+ Sbjct: 349 KLPIGGIMKTYDGVLADAFAGLKQDVTEENIQSRIRGNLLMALSNKFGSLLLTTGNKSEM 408 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 SVGY TLYGDM+GG + DL K V++++ WRN G IP S + K PSA Sbjct: 409 SVGYCTLYGDMNGGLAVIADLPKMMVYRVSRWRNLRGPA---------IPESTITKPPSA 459 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRR 530 ELRP QTDQ+SLPPY +LD+I++ VE +S Q Y+++TVR V L+ +E+KR+ Sbjct: 460 ELRPDQTDQDSLPPYELLDEILELHVEQCQSAEEIIAQGYDEQTVRRVLRLVRIAEFKRK 519 Query: 531 QAPVGTKITAKSFGRDRLYPIS 552 QA K+T+++FG PI Sbjct: 520 QAAPVLKVTSRAFGTGWRMPIV 541 >gi|254298299|ref|ZP_04965751.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 406e] gi|157808118|gb|EDO85288.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 406e] Length = 609 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 229/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 44 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 163 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 221 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 222 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 281 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 282 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 331 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 332 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 391 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 392 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 451 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 452 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 507 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 508 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 567 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 568 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|182415565|ref|YP_001820631.1| NAD+ synthetase [Opitutus terrae PB90-1] gi|177842779|gb|ACB77031.1| NAD+ synthetase [Opitutus terrae PB90-1] Length = 573 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 203/574 (35%), Positives = 298/574 (51%), Gaps = 26/574 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +AQ+NP VGD+A N A + QG +L+ F EL + GYPP DL+FK+ F++ Sbjct: 1 MRVGLAQINPTVGDLASNRRLILDAYQSLVAQGAELVAFPELAVCGYPPRDLLFKRRFVR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 C ++ + + G ++G ++ N+ AG I+A K LP Y Sbjct: 61 DCEDSLQQIAAQI--GSVPALIGTVTRNTTGSGRPTYNAAAFCRAGQIVATARKCLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----------NICKHLKKQGAE 169 F E R F + + R+GI ICEDIW + + + L Q + Sbjct: 119 DVFDEDRYFEPASAPIVVEHAGARIGITICEDIWTHPMISTRQLHRGADPVQQLAAQHCD 178 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +++ASP++ +K R ++ + +Y+N VGG DELIFDG S + Sbjct: 179 LMVNVSASPWHFDKDNLRETLIADTARALGCATVYLNVVGGNDELIFDGRSLACTADGSV 238 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY-------IPLQEEEADYNACVLS 282 ++ F + + + + +A+ E ++A VL Sbjct: 239 IEKLPAFQDALRVIDVPSTHVPPTARKAAAPAATLPARLPAATGCVASECADTFDALVLG 298 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 LRDY K+ F + +I LSGGIDSAL A IA ALG ENV + LP +S S +DA Sbjct: 299 LRDYAHKSGFKRALIALSGGIDSALVAVIATAALGAENVTGVSLPSAISSQHSRDDARQL 358 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG +++ + I + V ++++ + + ENIQ+RIRG I+MALSN A+L Sbjct: 359 AQNLGIRFETIAIAEPVAATEAVLADAFRGRTRDVTEENIQARIRGVIMMALSNKFGALL 418 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 LTT NKSE++VGY TLYGDM+GG + DLYKTQV+ +A W N LG E+IP Sbjct: 419 LTTGNKSEMAVGYCTLYGDMAGGLAVISDLYKTQVYSVARWINQVYAAR-LGRTGEIIPA 477 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHL 521 S + K PSAELRP Q DQ+SLPPY +LD I++ VE S + Q + + V V Sbjct: 478 STITKPPSAELRPDQLDQDSLPPYDVLDAILRSYVEEGHSRRDIVAQGFAEAVVNDVVRK 537 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +EYKR+QA G KIT +FG R PI K+ Sbjct: 538 VDLNEYKRKQAAPGLKITPLAFGVGRRIPIVQKY 571 >gi|121600205|ref|YP_993581.1| NAD synthetase [Burkholderia mallei SAVP1] gi|126451392|ref|YP_001081129.1| NAD synthetase [Burkholderia mallei NCTC 10247] gi|251768136|ref|ZP_02269590.2| glutamine-dependent NAD(+) synthetase [Burkholderia mallei PRL-20] gi|254177493|ref|ZP_04884148.1| glutamine dependent NAD+ synthetase [Burkholderia mallei ATCC 10399] gi|254205731|ref|ZP_04912083.1| glutamine dependent NAD+ synthetase [Burkholderia mallei JHU] gi|121229015|gb|ABM51533.1| glutamine dependent NAD+ synthetase [Burkholderia mallei SAVP1] gi|126244262|gb|ABO07355.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei NCTC 10247] gi|147753174|gb|EDK60239.1| glutamine dependent NAD+ synthetase [Burkholderia mallei JHU] gi|160698532|gb|EDP88502.1| glutamine dependent NAD+ synthetase [Burkholderia mallei ATCC 10399] gi|243060709|gb|EES42895.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei PRL-20] Length = 609 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 229/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 44 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 163 ASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 221 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 222 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 281 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 282 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 331 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 332 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 391 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 392 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 451 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 452 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 507 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 508 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 567 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 568 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|254197010|ref|ZP_04903434.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei S13] gi|169653753|gb|EDS86446.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei S13] Length = 609 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 229/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 44 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 163 ASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 221 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 222 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 281 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 282 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 331 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 332 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 391 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 392 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 451 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 452 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 507 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 508 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 567 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 568 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|134281251|ref|ZP_01767960.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 305] gi|134247557|gb|EBA47642.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 305] Length = 610 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 229/582 (39%), Positives = 333/582 (57%), Gaps = 40/582 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 44 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ----------DQEG------------VLN 98 F A +A+ L + G ++VG P + D N Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGGAAASSADGNANRPIERGAAPVDTYN 162 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 + ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 163 AASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HAS 221 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 222 AAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDG 281 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA 278 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 282 GSFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRA 331 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S D Sbjct: 332 LVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTD 391 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 AA AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 392 AADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKF 451 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L + Sbjct: 452 GSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----D 507 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRY 517 VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ Sbjct: 508 VIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKR 567 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 568 VTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 609 >gi|322370893|ref|ZP_08045448.1| NH(3)-dependent NAD(+) synthetase [Haladaptatus paucihalophilus DX253] gi|320549570|gb|EFW91229.1| NH(3)-dependent NAD(+) synthetase [Haladaptatus paucihalophilus DX253] Length = 557 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 204/576 (35%), Positives = 299/576 (51%), Gaps = 35/576 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++A+ Q N VGDIAGN K A DL++F+EL + GYPP+DLV + + Sbjct: 1 MSTVRVALGQQNYTVGDIAGNERKIEDGIHRAREANADLVVFSELALVGYPPQDLVKRTA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F+ A A+D + ++T D +VGF P + V N+V + G + +K L Sbjct: 61 FVDAQRDALDRIAAETTD--ITALVGFVARNPEPYGKEVQNAVAVCRDGEVTGQTEKRLL 118 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIR-LGILICEDIWKNSN----------ICKHLKKQ 166 P Y F E R F D LG+ ICED W + + L Sbjct: 119 PTYDVFDEDRFFQPATRQSVHALPDGTELGVSICEDAWNEPDVWERPEYDEDPIEDLVDA 178 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 GA+ L + +ASP+Y K R + + +++VNQVG DEL+FDG SF Sbjct: 179 GADLLVNCSASPFYGGKGAFRERLFGAHANDHGKWLVFVNQVGANDELVFDGRSFVVAPD 238 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 +A ++ F E + + D + + ++D+ P +A L +RDY Sbjct: 239 GTIACRLAAFEEDFAVYDVPLDVESPATHDVADE-------PATGPAEIRSALALGIRDY 291 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K F V++GLSGGIDS++ AA+A DALG ENV + +P +YTS S DA A+ L Sbjct: 292 VRKTGFENVVVGLSGGIDSSITAALAADALGPENVLGVGMPTRYTSDASEIDARELAENL 351 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G + LPI + F ++ L E P G+ EN+Q+RIR LMA++N +LL TS Sbjct: 352 GIDFLDLPIENTFEAFERELTPILDETP-GVTEENVQARIRATTLMAIANEQGRLLLATS 410 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 N+SE++VGY TLYGDM G P+ D KT V+ LA N H E IP ++E Sbjct: 411 NRSELAVGYTTLYGDMCGALAPIADCPKTFVYDLARHLNEHE---------ETIPERVIE 461 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGS 525 K PSAELR QTD++ LPPY ILD I+ V+ ++ + ++ E V V +L+ + Sbjct: 462 KPPSAELRADQTDEDDLPPYEILDSILAGYVDEGQTTDELVESGHDREIVERVLSMLHRA 521 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISE 561 EYKR QA K++ K+FG YP++ + +S+ Sbjct: 522 EYKRFQAAPVLKVSPKAFGVGWRYPLAANYEGVLSK 557 >gi|220907650|ref|YP_002482961.1| NAD synthetase [Cyanothece sp. PCC 7425] gi|219864261|gb|ACL44600.1| NAD+ synthetase [Cyanothece sp. PCC 7425] Length = 558 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 219/565 (38%), Positives = 312/565 (55%), Gaps = 27/565 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNP+VGD+ GN R A +A G +L++ EL + GYPP DL+ + SFI Sbjct: 1 MKIAIAQLNPLVGDLKGNSQLIRNAAAQAVAAGAELLITPELALCGYPPRDLLIEPSFIS 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 A ++ + G +VG + + + NSV +L G I K LP Y Sbjct: 61 ALQQQLEQ-LAQQLPAGLTTLVGTVVPNLQVGGKPLFNSVALLAEGKIQQTFTKRLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEF 170 F E R F G + ++ +R+G+ ICED+W + + L QG + Sbjct: 120 DVFDEDRYFEPGRQTNLLITAQLRIGVTICEDLWNDELFWQRRLYTVDPLAELASQGVDL 179 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 + + +ASP+ K + R I+ PI+YVNQVGG D+LIFDG S D Q ++ Sbjct: 180 ILNCSASPFSVGKQQLRERILEHAARRYQQPIVYVNQVGGNDDLIFDGRSVVVDRQGEVI 239 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + K F + EW ++Q + A P E + A VL ++DY QK Sbjct: 240 ARAKAFESDLLVLEWDQEEQDFR-------PAKCAPQPEDEIAEIWAALVLGVKDYAQKC 292 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F + +IGLSGGIDSAL AAIA ALG ENV +++P Y+S S+ DA A A+ LG + Sbjct: 293 KFAQAVIGLSGGIDSALVAAIATAALGAENVLGVLMPSPYSSDHSISDALALAQNLGIRT 352 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 LPI +L+ + + GI ENIQ+RIRGN+LMA++N +L++T NKSE Sbjct: 353 QTLPIAELMQTYDYTLIPLFSGTNPGIAEENIQARIRGNLLMAIANKFGYLLISTGNKSE 412 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDMSGG + DL KT+V+ + W N G E IP ++L K+PS Sbjct: 413 MAVGYCTLYGDMSGGLAAIADLPKTKVYAVCRWLNDQAKLQG----KEAIPQNVLAKAPS 468 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AEL+P QTDQ+SLPPY +LDDI+ R++E +S ++ TV V L++ +E+KR Sbjct: 469 AELKPGQTDQDSLPPYEVLDDILDRLIEQHQSVEEMVAAGHDLATVERVIQLVHRAEFKR 528 Query: 530 RQAPVGTKITAKSFGRDRLYPISNK 554 RQA G K+T ++FG PI+ + Sbjct: 529 RQAAPGLKLTPRAFGSGWRMPIAAR 553 >gi|167618315|ref|ZP_02386946.1| NAD synthetase [Burkholderia thailandensis Bt4] Length = 561 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 223/576 (38%), Positives = 330/576 (57%), Gaps = 34/576 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G ++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG----------------VLNSVVILD 104 F A +A+ L + G ++VG P + N+ ++ Sbjct: 60 FYAASDAALAELAAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV 119 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G + K +LPN F EKR F + + ++ G++ICED+W +++ + K Sbjct: 120 GGEVAGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVKFGVVICEDVW-HASAAQLAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF D Sbjct: 179 AAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 G +L +M F E N + E+ + L + + + Y A VL +R Sbjct: 239 GTGELVAKMPQFEEGNAIVEFDGARALPAAIAPALSVEAQV----------YRALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F IIGLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++LT Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFGSIVLT 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ +++P I Sbjct: 409 TGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGQ----PDIVPERI 464 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLY 523 L ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V L+ Sbjct: 465 LTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRVTRLIK 524 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 INEYKRRQAPVGIRVTHRAFGRDWRYPITSRFVESI 560 >gi|72161387|ref|YP_289044.1| NH(3)-dependent NAD(+) synthetase [Thermobifida fusca YX] gi|71915119|gb|AAZ55021.1| NH(3)-dependent NAD(+) synthetase [Thermobifida fusca YX] Length = 577 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 203/584 (34%), Positives = 302/584 (51%), Gaps = 46/584 (7%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSS 68 +AQ+NP VGD+ GN A G L++F E+ ++GYP EDL + +F+ A + Sbjct: 1 MAQVNPTVGDLEGNSDLIVDYTRRAADAGAHLVVFPEMVLTGYPVEDLALRGAFVDASIT 60 Query: 69 AIDTLKSDTHDGGAG---IVVGFPRQDQEGV-----------LNSVVILDAGNIIAVRDK 114 A+ L D G G + VG+ + + V N+V +L G + K Sbjct: 61 ALHALARRLADTGLGDLPVAVGYLDRHRNTVAPTRGQPAGAPHNAVALLYQGQPVFTSAK 120 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSL 174 +LPNY F E R F+ G + + I + +ICED+W++ +++ A L + Sbjct: 121 HHLPNYGVFDEARNFVPGTTLPVVRLHSIDVAFVICEDLWQDGGPVAAVREAEAGLLVVI 180 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 N SPY K R E+ T + + YVN VGGQDEL+FDG S +L + Sbjct: 181 NGSPYERGKRDTRLELCTRRARETQATVAYVNLVGGQDELVFDGDSLIVHPDGRLLARAP 240 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ----------------------EE 272 F E + + + + + A + I E Sbjct: 241 QFEEHLLVADLELPDAVGAGMWGASADAPGITIQRHLVSADPVPAYEPQPAPLAPRRDEI 300 Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 Y A VL+ RDYV KN F V++GLSGGIDSAL A IAVDALG + V +++P +Y++ Sbjct: 301 GEVYAALVLATRDYVHKNRFPSVLLGLSGGIDSALVATIAVDALGADRVHGVLMPSRYST 360 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 S+ DA A+ G ++P+ LV F + + + G+ EN+Q+R+RG +LM Sbjct: 361 DHSVTDAEELARRQGINARIIPVAPLVEAFENAV------KVDGLAEENLQARVRGQLLM 414 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 LSN ++LTT NKSE++VGY TLYGD +GGF P++D++KT V++LA WRN+ +G Sbjct: 415 TLSNQEGHLVLTTGNKSELAVGYSTLYGDSAGGFAPIRDVWKTLVWELARWRNAEAERNG 474 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYN 511 P IP + K PSAELRP Q D +SLP Y +LD ++ V + ++ Sbjct: 475 QVP---PIPEHSITKPPSAELRPGQLDTDSLPEYDVLDALLDDYVGTDLGRDELVAAGHD 531 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 E V V ++ +EYKRRQ P G KI+ ++FGRDR PI++++ Sbjct: 532 PELVDRVIRMVDRAEYKRRQYPPGPKISTRNFGRDRRVPITSRW 575 >gi|126441824|ref|YP_001058134.1| NAD synthetase [Burkholderia pseudomallei 668] gi|126221317|gb|ABN84823.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 668] Length = 566 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 229/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 120 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 289 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 ADMAKRVGVRYDEIAIAPMFDAFCASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|320011138|gb|ADW05988.1| NAD+ synthetase [Streptomyces flavogriseus ATCC 33331] Length = 586 Score = 554 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 208/591 (35%), Positives = 304/591 (51%), Gaps = 44/591 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDATVGDLAGNSESILHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A A+ L D G G +VVG+ + + N+ +L G + Sbjct: 61 FVEASRRALRALAVRLADEGFGELPVVVGYLDRSEHPAVRYGQPAGSPRNAAAVLHRGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G S + I + + ICED+W++ + GA Sbjct: 121 ALNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQDGGRVPAARAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ GGQDEL+FDG S + Sbjct: 181 GLLLSVNASPYERDKDDTRLELVRRRAREAGCTTAYLAMTGGQDELVFDGDSIVVGKDGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNY---------------------MSDDSASTMYI 267 + + FSE + + ++ + A Sbjct: 241 VIARAPQFSEGTVILDLDLPAASAEAPSGVVADGLRIDHVVLSEEPLPAYEPELAGGYAE 300 Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR Y KN F V+IGLSGGIDSAL A IA DALG +NV + +P Sbjct: 301 RLDDDEELYSALVVGLRAYAAKNGFSSVLIGLSGGIDSALVAVIACDALGADNVYGLSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G + +PI + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNFRTVPIEPMFDAYMDSLG------LTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTMLMAVSNQEGQIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPDQVDTDSLPDYDVLDRILELYVDRDQGRDAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++D V ++ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDDALVTRTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 582 >gi|167823227|ref|ZP_02454698.1| NAD synthetase [Burkholderia pseudomallei 9] gi|217419898|ref|ZP_03451404.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 576] gi|226194412|ref|ZP_03790010.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei Pakistan 9] gi|217397202|gb|EEC37218.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 576] gi|225933497|gb|EEH29486.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei Pakistan 9] Length = 566 Score = 554 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 229/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 120 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 289 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|126657598|ref|ZP_01728753.1| NAD(+) synthetase [Cyanothece sp. CCY0110] gi|126621054|gb|EAZ91768.1| NAD(+) synthetase [Cyanothece sp. CCY0110] Length = 561 Score = 554 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 215/575 (37%), Positives = 320/575 (55%), Gaps = 42/575 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLNPV+GDI N K A ++A ++ + L+L EL + GYPP DL+ SFI+ Sbjct: 1 MKIAIAQLNPVIGDIENNAKKILDAAQKAVKKNVRLLLTPELSLCGYPPRDLLLYPSFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP-------RQDQEGVLNSVVILDAGNIIAVRDKINL 117 + + L ++VG + ++ + NS V+L+ G I V K L Sbjct: 61 FLTIQLQELAKQLPPQ-LAVLVGTVTPNHAATIKGEKPLFNSAVLLENGEIKQVFHKWLL 119 Query: 118 PNYSEFHEKRTFISGYSNDPIVF-------RDIRLGILICEDIWKNS----------NIC 160 P Y F E R F G + I++G+ ICED+W + N Sbjct: 120 PTYDVFDEYRYFEPGKELNFFQISLNNNSEEIIKIGVTICEDLWNDEQFWQKRSYQQNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L + + +L+ASPY+ +K K R +++ H +PIIYVNQ+GG D+LIFDG S Sbjct: 180 EELVNINIDLIINLSASPYHLHKPKLRTQMLQSSSYHYQVPIIYVNQIGGNDDLIFDGNS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F + + + F+E + E+ + N S ++ EEE ++A V Sbjct: 240 FVVNEKGNIVLAATAFTEDFKIFEFDPKDKKIPLN-------SINHLLPIEEEELFSALV 292 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DY +K F KV++GLSGGIDSAL AAIA +A+G++NV +++P Y+S S++DA Sbjct: 293 LGLKDYAKKCQFTKVVLGLSGGIDSALVAAIAAEAIGEKNVLGVLMPSPYSSDHSIKDAK 352 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 K LG + +LPI +++ + ++ E G+ EN+Q+RIRGN+LMAL+N Sbjct: 353 KLVKNLGINHHILPIGEVMKTYDQVLDPLFSETEFGVAEENLQARIRGNLLMALANKFGY 412 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSE++VGY TLYGDM+GG + D+ KT+VF L W N H E+I Sbjct: 413 LLLSTGNKSEMAVGYCTLYGDMNGGLAVIADVPKTRVFSLCHWLNRHE---------EII 463 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVE 519 P +IL K PSAEL+P+Q DQ+SLP Y ILD I+ + + SF ++ V+ V Sbjct: 464 PNNILIKPPSAELKPNQFDQDSLPSYEILDVILNLNINHYRSFHEICQAGFDPHIVKQVL 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 L+ +E+KR+Q+P+ K+T K+FG PIS Sbjct: 524 KLVTRAEFKRKQSPLVLKVTDKAFGTGWRMPISRG 558 >gi|254247523|ref|ZP_04940844.1| NAD+ synthase [Burkholderia cenocepacia PC184] gi|124872299|gb|EAY64015.1| NAD+ synthase [Burkholderia cenocepacia PC184] Length = 618 Score = 554 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 222/591 (37%), Positives = 327/591 (55%), Gaps = 49/591 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 43 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPA 101 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQ-------------------DQEG------ 95 F A ++A+D L G ++VG P + D Sbjct: 102 FYAAAAAALDALADALKAFDGLAVLVGHPLRGPGSGPGSGAGDDARASAVDGNANRPIER 161 Query: 96 ------VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILI 149 N+V ++ G I+ K +LPN F EKR F + ++ G++I Sbjct: 162 GVPPTDTFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDTEPLVFELNGVKYGVII 221 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 CED W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VG Sbjct: 222 CEDAW-HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVG 280 Query: 210 GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL 269 GQDEL+FDG SF DG L +M F E + + E+ + + L Sbjct: 281 GQDELVFDGGSFVLDGDGSLVAKMPQFDEGHAIVEFD----------GARPLPGAIAPEL 330 Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 + Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P + Sbjct: 331 STDAQVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSR 390 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 +T+ S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG Sbjct: 391 FTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALAGEFAGRAEDATEENIQARIRGT 450 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 451 LLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATTD 510 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQ 508 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 511 Y----ALRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAA 566 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 567 GYAQADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 617 >gi|171742677|ref|ZP_02918484.1| hypothetical protein BIFDEN_01791 [Bifidobacterium dentium ATCC 27678] gi|171278291|gb|EDT45952.1| hypothetical protein BIFDEN_01791 [Bifidobacterium dentium ATCC 27678] Length = 565 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 208/579 (35%), Positives = 310/579 (53%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K A Q +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDANADKVMHYAHLAAAQHAKVVVFPEMTLTGYPIEDLALRGT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFP--RQDQEGVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G +VVG ++ N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELAADGLDDLFVVVGTVGTDRENSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L KQ + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVDGARIGVAICEDIWQDGGPVAELAKQDIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRFDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFTVDADGTLLQRSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + ++D + Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLALFDLDTTAERQSVGVIADKPDPDEEV--------YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA A +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGNNVYGISMPSMYSSDGSKDDAADLANNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFVAYQKQL------DLEGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG-----------------PLTEV 459 T+YGD GG+ P+KDL KT+V++++ WRN P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNESGSAGVPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + +++ TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAMYIEHAHGRADLLADGFDEATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|148244626|ref|YP_001219320.1| NAD+ synthase (glutamine-hydrolysing) [Candidatus Vesicomyosocius okutanii HA] gi|146326453|dbj|BAF61596.1| NAD+ synthase (glutamine-hydrolysing) [Candidatus Vesicomyosocius okutanii HA] Length = 543 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 225/557 (40%), Positives = 331/557 (59%), Gaps = 28/557 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 K +KI IAQ+NP+VGD+ GN K + +EA +G DL++F EL + GYPPEDL+ + Sbjct: 12 SKSIKIDIAQINPIVGDLNGNTQKIIKLTQEAYIRGCDLLVFPELSLIGYPPEDLLLHEG 71 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F+Q + TL + T I+ G P + + + NS ++ + K NLPNY Sbjct: 72 FVQQVQDKV-TLINQTISNNISIIFGAPYKKDDILYNSAYLIQNSQV-YFYHKQNLPNYG 129 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F EKR F SG + ++ ++ICED W S+I +G + + S+NASP+ Sbjct: 130 VFDEKRYFESGNEPFIFECQGKKISLVICEDAWT-SDIISISANKGVQIIISINASPFQI 188 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R E + ++ IYVN VG QDEL+FDGASF + + Q+ F E Sbjct: 189 GKHSQRIEQIKQRVLETKTNFIYVNMVGAQDELVFDGASFAMNSNANITLQLPLFKEAVQ 248 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN-FHKVIIGLS 300 + S T++ E+ Y+A VL+ +DY++KN+ F+ V+IGLS Sbjct: 249 SVSF--------------TSPITLFDTDPIEKTIYDALVLATKDYIEKNDVFNGVVIGLS 294 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G E+++ IM+PYKYTS SLEDA A + Y + IH +V+ Sbjct: 295 GGIDSALTLAIAADAIGTEHIKAIMMPYKYTSNISLEDAKIQATTMNVDYHEINIHIIVD 354 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + ENIQ+RIRG +LMA+SN ++LTTSNKSEI+VGY TLYG Sbjct: 355 SFNTQLNTLFIGMETDTTEENIQARIRGTLLMAISNKLGKIVLTTSNKSEIAVGYTTLYG 414 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DMSGGF PLKD+ KT V+QLA +RN+ ++ +IP ++++ PSAEL P+Q DQ Sbjct: 415 DMSGGFAPLKDVNKTLVYQLAKYRNT---------ISTIIPERVIDRKPSAELAPNQADQ 465 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y LD I+ +E + S + Q +N++TV+Y+ ++ +EYKRRQ+ G KI+ Sbjct: 466 DSLPSYNELDAILTLFIEQKYSVKHIIKQGFNEQTVKYITQMVLNNEYKRRQSAPGPKIS 525 Query: 540 AKSFGRDRLYPISNKFR 556 +FG++R YP+++KF+ Sbjct: 526 PNAFGKERRYPMTSKFQ 542 >gi|311064605|ref|YP_003971330.1| glutamine-dependent NAD(+) synthetase NadE [Bifidobacterium bifidum PRL2010] gi|310866924|gb|ADP36293.1| NadE Glutamine-dependent NAD(+) synthetase [Bifidobacterium bifidum PRL2010] Length = 565 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 214/579 (36%), Positives = 317/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+AQ++ VGD+ GN K A +G +++F E+ ++GYP EDL +++ Sbjct: 1 MTHLRFALAQIDTCVGDLDGNADKIMHYAHLAAHEGARVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G G + VG D + N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELEADGLGDLYVAVGTVGTDHASDKPRNRMVVLHDGMVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + +R+G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFAAGDRTVVLDIDGVRIGVAICEDIWQDGGPVARLADEHIDVLMTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R+++ + + V P+IYVNQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTHTRYDLAVRRAAEVGAPMIYVNQVGGQDDLVFDGGSFVVDRDGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + D + + ++D + Y ACVL L+DY+ KN F V Sbjct: 241 MEHLGLFDLDTDAEHQTTSDIADLPDPDEEV--------YTACVLGLKDYMAKNRFSGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G NV I +P Y+S S +DAA A +G YDV PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGRNVHGISMPSMYSSIGSKDDAADLAANIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + N + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PIFNVYQGQL------KLEGVAAENLQARIRGVIVMAYSNSLGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----------------NSHGITSGLGPLTEV 459 T+YGD GG+ P+KDL KT+V++L+ WR N +G P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWELSRWRNRAAAAGVGIGGLRIVGNENGDAGTPLPGGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++++TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYELLDKVLAAYIEHAHGRADLLADGFDEKTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|167718609|ref|ZP_02401845.1| NAD synthetase [Burkholderia pseudomallei DM98] Length = 567 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 229/582 (39%), Positives = 333/582 (57%), Gaps = 40/582 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ----------DQEG------------VLN 98 F A +A+ L + G ++VG P + D N Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRVAGGAAASSADGNANRPIERGAAPVDTYN 119 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 + ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 120 AASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HAS 178 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDG 238 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA 278 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 GSFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRA 288 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S D Sbjct: 289 LVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTD 348 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 AA AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 AADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKF 408 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L + Sbjct: 409 GSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----D 464 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRY 517 VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ Sbjct: 465 VIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKR 524 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 VTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 566 >gi|53725163|ref|YP_102509.1| NAD synthetase [Burkholderia mallei ATCC 23344] gi|67639855|ref|ZP_00438685.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei GB8 horse 4] gi|124383580|ref|YP_001028956.1| NAD synthetase [Burkholderia mallei NCTC 10229] gi|167844790|ref|ZP_02470298.1| NAD synthetase [Burkholderia pseudomallei B7210] gi|167910020|ref|ZP_02497111.1| NAD synthetase [Burkholderia pseudomallei 112] gi|167918051|ref|ZP_02505142.1| NAD synthetase [Burkholderia pseudomallei BCC215] gi|254199416|ref|ZP_04905782.1| glutamine dependent NAD+ synthetase [Burkholderia mallei FMH] gi|254357888|ref|ZP_04974161.1| glutamine dependent NAD+ synthetase [Burkholderia mallei 2002721280] gi|52428586|gb|AAU49179.1| glutamine dependent NAD+ synthetase [Burkholderia mallei ATCC 23344] gi|124291600|gb|ABN00869.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei NCTC 10229] gi|147749012|gb|EDK56086.1| glutamine dependent NAD+ synthetase [Burkholderia mallei FMH] gi|148027015|gb|EDK85036.1| glutamine dependent NAD+ synthetase [Burkholderia mallei 2002721280] gi|238520463|gb|EEP83923.1| glutamine-dependent NAD(+) synthetase [Burkholderia mallei GB8 horse 4] Length = 566 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 229/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 120 ASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 289 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|167737637|ref|ZP_02410411.1| NAD synthetase [Burkholderia pseudomallei 14] Length = 566 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 228/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G+++CED+W +++ Sbjct: 120 ASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVLCEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 289 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|167814772|ref|ZP_02446452.1| NAD synthetase [Burkholderia pseudomallei 91] Length = 566 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 229/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 120 ASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEESHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 289 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|254190774|ref|ZP_04897281.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei Pasteur 52237] gi|157938449|gb|EDO94119.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei Pasteur 52237] Length = 609 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 228/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 44 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 163 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 221 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 222 AQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 281 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 282 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 331 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 332 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 391 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 392 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 451 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 452 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 507 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 508 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 567 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 568 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|83718910|ref|YP_441438.1| NAD synthetase [Burkholderia thailandensis E264] gi|257139886|ref|ZP_05588148.1| NAD synthetase [Burkholderia thailandensis E264] gi|83652735|gb|ABC36798.1| glutamine dependent NAD+ synthetase [Burkholderia thailandensis E264] Length = 561 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 223/576 (38%), Positives = 330/576 (57%), Gaps = 34/576 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G ++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG----------------VLNSVVILD 104 F A +A+ L + G ++VG P + N+ ++ Sbjct: 60 FYAASDAALAELAAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV 119 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G + K +LPN F EKR F + + ++ G++ICED+W +++ + K Sbjct: 120 GGEVAGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVKFGVVICEDVW-HASAAQLAK 178 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF D Sbjct: 179 AAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 238 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 G +L +M F E N + E+ + L + + + Y A VL +R Sbjct: 239 GAGELVAKMPQFEEGNAIVEFDGARALPAAIAPALSVEAQV----------YRALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY+ KN F IIGLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DAA A+ Sbjct: 289 DYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN +++LT Sbjct: 349 RVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFGSIVLT 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ +++P I Sbjct: 409 TGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGQ----PDIVPERI 464 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLY 523 L ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V L+ Sbjct: 465 LTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRVTRLIK 524 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 INEYKRRQAPVGIRVTHRAFGRDWRYPITSRFVESI 560 >gi|172061365|ref|YP_001809017.1| NAD synthetase [Burkholderia ambifaria MC40-6] gi|171993882|gb|ACB64801.1| NAD+ synthetase [Burkholderia ambifaria MC40-6] Length = 576 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 222/591 (37%), Positives = 324/591 (54%), Gaps = 49/591 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG------------------------- 95 F A ++A+D L G ++VG P + Sbjct: 60 FYAAAAAALDALADALRPFDGLAVLVGHPLRGPGRGPGSDPGDDARAPAVDGNANRPIER 119 Query: 96 ------VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILI 149 N+V ++ G I K +LPN F EKR F + ++ G++I Sbjct: 120 GVPPADTYNAVSLIVGGQIAGTYRKQDLPNADVFDEKRYFATDAEPLVFELNGVKFGVII 179 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 CED W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VG Sbjct: 180 CEDAW-HASAAQIAKAAGAQVLLIPNGSPYHMNKEALRIDILRARIRETGLPMVYVNLVG 238 Query: 210 GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL 269 GQDEL+FDG SF D Q L +M F E + + E+ + + L Sbjct: 239 GQDELVFDGGSFVLDAQGALVAKMPQFDEGHAIVEFD----------GARPLPGAIAAAL 288 Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 + Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P + Sbjct: 289 PVDAQVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSR 348 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 YT+ S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG Sbjct: 349 YTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALADEFAGRAEDATEENIQARIRGT 408 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN Sbjct: 409 LLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNETAD 468 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQ 508 L VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 469 Y----VLRNVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAA 524 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 GYAEADVARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 575 >gi|53718666|ref|YP_107652.1| NAD synthetase [Burkholderia pseudomallei K96243] gi|52209080|emb|CAH35021.1| putative glutamine-dependent NAD synthase [Burkholderia pseudomallei K96243] Length = 576 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 229/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 11 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 69 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 70 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 129 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 130 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 188 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 189 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 248 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 249 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 298 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 299 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 358 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 359 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 418 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 419 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 474 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 475 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 534 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 535 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 575 >gi|148360612|ref|YP_001251819.1| glutamine dependent NAD+ synthetase [Legionella pneumophila str. Corby] gi|296106322|ref|YP_003618022.1| NAD synthase (glutamine-hydrolysing) [Legionella pneumophila 2300/99 Alcoy] gi|148282385|gb|ABQ56473.1| glutamine dependent NAD+ synthetase [Legionella pneumophila str. Corby] gi|295648223|gb|ADG24070.1| NAD synthase (glutamine-hydrolysing) [Legionella pneumophila 2300/99 Alcoy] gi|307609529|emb|CBW99027.1| hypothetical protein LPW_08121 [Legionella pneumophila 130b] Length = 536 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 214/557 (38%), Positives = 294/557 (52%), Gaps = 27/557 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L + +AQ+NP VG I N K + ++ D+I+F EL +SGYP EDL+F+K Sbjct: 1 MNAPLTVLMAQINPTVGAIDANTNKILDVIKN-HQASHDVIIFPELTLSGYPAEDLLFRK 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + ++ T D ++VG P N I G I K LPNY Sbjct: 60 EYHDKILINLHDIQDTTKD--CYVIVGHPMMHIGDCYNGFSIFYQGEKIREYHKQKLPNY 117 Query: 121 SEFHEKRTFISGY-SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E R F G + ++ +LG +CED+W+ L G L SLNASP+ Sbjct: 118 GVFDEARYFTPGKKDPCVLSIKNHKLGFCVCEDLWQ-KGPVDDLLDSGISILISLNASPF 176 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K + R E++ + IIYVNQ+GGQD+L+FDG S D Q + F E Sbjct: 177 DYRKYQLREELLRSYAKQ-GVSIIYVNQIGGQDDLLFDGQSLAMDNQGIIRALAPAFEES 235 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ D A Y A V RDYV+KNNF V++GL Sbjct: 236 LCTVNIDGNKIDGSITPYLDKEA-----------LIYKALVCGTRDYVRKNNFPGVLLGL 284 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL AIAVDALG E V +++P +YT+ S EDA L + ++PI + Sbjct: 285 SGGIDSALTLAIAVDALGAEQVHAVLMPSRYTASISNEDALEQLSNLKVAHSIIPIEPMF 344 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + ++ P ENIQ+RIRG +LMALSN + M+LTTSNKSE +VGY TLY Sbjct: 345 QSMIESLHPVFKDLPPDTTEENIQARIRGMLLMALSNKTGKMVLTTSNKSETAVGYATLY 404 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF LKD+ KTQV++L +RN ++ VIP ++ + PSAEL+P+QTD Sbjct: 405 GDMAGGFAVLKDVLKTQVYELVRYRNK---------ISLVIPERVITRPPSAELKPNQTD 455 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y LD II +E S + + + V + L+ +EYKRRQA G KI Sbjct: 456 QDSLPEYGELDAIIMAYMEQNLSPSEIIAKGFKPQVVNKIIQLIKRNEYKRRQAAPGIKI 515 Query: 539 TAKSFGRDRLYPISNKF 555 + +FG+D YPI+N F Sbjct: 516 SNLAFGKDWRYPITNGF 532 >gi|254181374|ref|ZP_04887971.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1655] gi|184211912|gb|EDU08955.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1655] Length = 609 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 228/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 44 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 102 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 103 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 162 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 163 ASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 221 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 222 AQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 281 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 282 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 331 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 332 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 391 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 392 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 451 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 452 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 507 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 508 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 567 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 568 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 608 >gi|170733752|ref|YP_001765699.1| NAD synthetase [Burkholderia cenocepacia MC0-3] gi|169816994|gb|ACA91577.1| NAD+ synthetase [Burkholderia cenocepacia MC0-3] Length = 572 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 221/587 (37%), Positives = 326/587 (55%), Gaps = 45/587 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG------------------------- 95 F A ++A+D L G ++VG P + Sbjct: 60 FYAAAAAALDALADALKAFDGLAVLVGHPLRGPGSGAGDDARASAVDGNANRPIERGVPP 119 Query: 96 --VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 N+V ++ G I+ K +LPN F EKR F + ++ G++ICED Sbjct: 120 TDTFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDTEPLVFELNGVKYGVIICEDA 179 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDE Sbjct: 180 W-HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGGQDE 238 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEE 273 L+FDG SF DG L +M F E + + E+ + + L + Sbjct: 239 LVFDGGSFVLDGDGALVAKMPQFDEGHAIVEFD----------GARPLPGAIAPELSTDA 288 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P ++T+ Sbjct: 289 QVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRFTAD 348 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMA Sbjct: 349 ISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALAGEFAGRAEDATEENIQARIRGTLLMA 408 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 409 LSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATTDY--- 465 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYND 512 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 466 -ALRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMQMYMEEDRPLAEIVAAGYAQ 524 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 ADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 571 >gi|167900233|ref|ZP_02487634.1| NAD synthetase [Burkholderia pseudomallei 7894] Length = 567 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 229/582 (39%), Positives = 333/582 (57%), Gaps = 40/582 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ----------DQEG------------VLN 98 F A +A+ L + G ++VG P + D N Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGGAAASSADGNANRPIERGAAPVDTYN 119 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 + ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 120 AASLIVGGGVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HAS 178 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AAQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDG 238 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA 278 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 GSFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRA 288 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S D Sbjct: 289 LVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTD 348 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 AA AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 AADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKF 408 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L + Sbjct: 409 GSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----D 464 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRY 517 VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ Sbjct: 465 VIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKR 524 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 VTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 566 >gi|283456252|ref|YP_003360816.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium dentium Bd1] gi|283102886|gb|ADB09992.1| nadE Glutamine-dependent NAD(+) synthetase [Bifidobacterium dentium Bd1] Length = 565 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 207/579 (35%), Positives = 310/579 (53%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K A Q +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDANADKVMHYAHLAAAQHAKVVVFPEMTLTGYPIEDLALRGT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFP--RQDQEGVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G +VVG ++ N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELAADGLDDLFVVVGTVGTDRENSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L KQ + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVDGARIGVAICEDIWQDGGPVAELAKQDIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRFDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFTVDADGTLLQRSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + ++D + Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLALFDLDTTAERQSVGVIADKPDPDEEV--------YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA A +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGNNVYGISMPSMYSSDGSKDDAADLANNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFVAYQKQL------DLEGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG-----------------PLTEV 459 T+YGD GG+ P+KDL KT+V++++ WRN P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNESGSAGVPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + +++ T+ V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAMYIEHAHGRADLLADGFDEATIDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|254391519|ref|ZP_05006720.1| NH(3)-dependent NAD(+) synthetase [Streptomyces clavuligerus ATCC 27064] gi|197705207|gb|EDY51019.1| NH(3)-dependent NAD(+) synthetase [Streptomyces clavuligerus ATCC 27064] Length = 589 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 208/586 (35%), Positives = 307/586 (52%), Gaps = 44/586 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 + + Q++ VGD++GN R + QG L+ F E+ ++GYP EDL + SF+ A Sbjct: 9 LTLNQIDSTVGDLSGNAESIVRRTRHSAEQGAHLVAFPEMALTGYPVEDLALRASFVAAS 68 Query: 67 SSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNIIAVRD 113 +A+ L D G ++VG+ + + N+ +L G ++ Sbjct: 69 RAALLALAVRLADEDLGELPVIVGYLDRSEAAQPTYGQPAGAPRNAAAVLHRGEVVLSFA 128 Query: 114 KINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 K +LPNY F E R F+ G + I + + + ICED+W++ + GA L S Sbjct: 129 KHHLPNYGVFDEFRYFVPGDTLPVIRVHGVDVALAICEDLWQDGGRVPAARSAGAGLLIS 188 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASPY NK R E+V + Y+ +GGQDEL+FDG S D ++ + Sbjct: 189 INASPYEQNKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDASGEVVARA 248 Query: 234 KHFSEQNFMTEWHY-------------DQQLSQWNYMSDDSASTMYIP--------LQEE 272 FSE + + D +S D + L ++ Sbjct: 249 PQFSEGCVVLDLELPAAAPGIPSGIVDDGLRIDHVVVSADPLPSYDPELTGGYAERLDDD 308 Query: 273 EADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS 332 E Y+A V+ LR Y KN F V+IGLSGGIDSAL AAIA DA+G +NV + +P KY+S Sbjct: 309 EEVYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAAIACDAVGAQNVYGVSMPSKYSS 368 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 S +DAA A+ G + + I L + + ++ +G+ EN+QSR+RG +LM Sbjct: 369 EHSKDDAAELARRTGLHFRTVSIEPLFDAYMGSLA------LTGLAEENLQSRLRGTLLM 422 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 A+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN G Sbjct: 423 AVSNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTTVFRLAHWRNRAAEERG 482 Query: 453 LGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYN 511 P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ ++ Sbjct: 483 QTP---PIPEASITKPPSAELRPGQMDTDSLPDYDVLDRILELYVDRDQGKEAIVAAGFD 539 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +E V L+ +EYKRRQ P GTKI+AK FG+DR PI+N++R+ Sbjct: 540 EELVTRTLRLVDTAEYKRRQYPPGTKISAKGFGKDRRLPITNRWRE 585 >gi|317482298|ref|ZP_07941319.1| NAD synthase [Bifidobacterium sp. 12_1_47BFAA] gi|316916314|gb|EFV37715.1| NAD synthase [Bifidobacterium sp. 12_1_47BFAA] Length = 565 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 215/579 (37%), Positives = 318/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGTTIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W +D + + + L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSAAEHQ------AKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L N + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFNAYQQQL------DLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV----------------- 459 T+YGD GG+ P+KDL KT+V++++ WRN ++ Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGIPLKDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++ TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|115352508|ref|YP_774347.1| NAD synthetase [Burkholderia ambifaria AMMD] gi|115282496|gb|ABI88013.1| DNA-directed RNA polymerase, subunit H [Burkholderia ambifaria AMMD] Length = 576 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 222/591 (37%), Positives = 326/591 (55%), Gaps = 49/591 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG------------------------- 95 F A ++A+DTL G ++VG P + Sbjct: 60 FYAAAAAALDTLADALRPFDGLAVLVGHPLRGPGSGAGSDSGDDARAPAVDGNANRPIER 119 Query: 96 ------VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILI 149 N+V ++ G I K +LPN F EKR F + ++ G++I Sbjct: 120 GVPPADTYNAVSLIVGGEIAGTYRKQDLPNADVFDEKRYFATDAEPLVFELNGVKFGVII 179 Query: 150 CEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVG 209 CED W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VG Sbjct: 180 CEDAW-HASAAQIAKAAGAQVLLVPNGSPYHMNKDALRIDILRARIRETGLPMVYVNLVG 238 Query: 210 GQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL 269 GQDEL+FDG SF D Q L +M F E + + E+ + + L Sbjct: 239 GQDELVFDGGSFVLDAQGALVAKMPQFDEGHAIVEFD----------GARPLPGAIAPAL 288 Query: 270 QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYK 329 + Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P + Sbjct: 289 PIDAQVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGLERVRAVMMPSR 348 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 YT+ S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG Sbjct: 349 YTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALADEFAGRAEDATEENIQARIRGT 408 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 +LMALSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 409 LLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATAD 468 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQ 508 +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Sbjct: 469 YGQ----RDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAA 524 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 Y + V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 GYAEADVARVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 575 >gi|167569235|ref|ZP_02362109.1| NAD synthetase [Burkholderia oklahomensis C6786] Length = 566 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 228/581 (39%), Positives = 331/581 (56%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAARAAHDAGAQLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDGGAG-IVVGFPRQDQEG---------------------VLNS 99 F A +A+ L + ++VG P++ N+ Sbjct: 60 FYAASDAALAELAALLKPLAGLAVLVGHPQRAAGSGASSADGNANRPIERGVSPTDTYNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + ++ G++ICED+W +++ Sbjct: 120 ASLIVDGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVKFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ NK R +I+ +I LP+IYVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMNKEAVRIDILRARIRETGLPMIYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E N + E+ + + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGNAVVEFD----------GARPLPARIAPELSVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL + DY+ KN F IIGLSGG+DSAL A+AVDALG + V+ +M+P +YT+ S DA Sbjct: 289 VLGVHDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGADRVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 AA AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 AAMAKRVGVRYDEIAIAPMFDAFRTSLAGEFAGRAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGKL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYSEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI++ F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSCFTESI 565 >gi|296453931|ref|YP_003661074.1| NAD+ synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296183362|gb|ADH00244.1| NAD+ synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 565 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 214/579 (36%), Positives = 316/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELAAQLNDDGLGNLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERGPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W +D + + L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSTAEHQ------VKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V I Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQSIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L N + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFNAYQQQL------DLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV----------------- 459 T+YGD GG+ P+KDL KT+V++++ WRN ++ Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNAGIPLKDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++ TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|22298723|ref|NP_681970.1| NAD synthetase [Thermosynechococcus elongatus BP-1] gi|22294904|dbj|BAC08732.1| glutamine-dependent NAD(+) synthetase [Thermosynechococcus elongatus BP-1] Length = 572 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 208/575 (36%), Positives = 304/575 (52%), Gaps = 37/575 (6%) Query: 9 IAQLNPVVGDIAGNIAKARRAREEANRQG-MDLILFTELFISGYPPEDLVFKKSFIQACS 67 IAQLN VG + N A +E Q +DL++ EL + GYPP+DL+ + F++A Sbjct: 7 IAQLNSTVGSLRTNAEAIASAVQEICSQHPVDLVITPELALCGYPPKDLLLNRHFVEAMQ 66 Query: 68 SAIDTLKSDTHDGGAGIVVGFPRQDQEG-------VLNSVVILDAGNIIAVRDKINLPNY 120 + L S ++VG + + + N +L G + V K LP Y Sbjct: 67 QELHHLASALPPA-VAVLVGTVLPNPDADVKGQKPLYNGAALLREGEVQQVFAKQLLPTY 125 Query: 121 SEFHEKRTFISGYSNDPIV----FRDIRLGILICEDIWKNS----------NICKHLKKQ 166 F E R F G + + + +++G+ ICED+W N N L + Sbjct: 126 DVFDECRYFAPGSTENLLTLTTATDQLKIGVTICEDLWNNEQFWGQRYYERNPVAELVAE 185 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 GA+ + +L+ASPY K K R ++ H P+IY NQVGG D+L+FDG S + Q Sbjct: 186 GADLIVNLSASPYCVGKPKLRQALIEHTARQYHCPLIYANQVGGNDDLVFDGTSLAVNRQ 245 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 ++ + K F E W +A + E + A VL +RDY Sbjct: 246 GEVVSRAKGFREDYLAVRWQDGDLQ--------PTAMIAPLAKGEAAEIWQALVLGVRDY 297 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +K F +V+IGLSGGIDSAL AAIA A+GKE V +++P Y+S S+ DA A L Sbjct: 298 ARKCGFRQVVIGLSGGIDSALVAAIATAAVGKEQVLGVLMPSPYSSEHSITDAKDLAANL 357 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G VLPI L+ + +++ PSG+ ENIQ+RIRG +LMA++N +LL+T Sbjct: 358 GIATQVLPIAPLMQTYSEVLAPLFAGTPSGVAEENIQARIRGTLLMAIANKFGHLLLSTG 417 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE-----VIP 461 NKSE++VGY TLYGDM+GG + D+ KT+V++L W N P VIP Sbjct: 418 NKSELAVGYCTLYGDMNGGLAAIADVPKTRVYELCHWLNGQAAQGRPIPDLPIAGPVVIP 477 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEH 520 P IL K+PSAEL+P Q DQ+SLPPY ILD I+ R+++ +S Y+ + V++V Sbjct: 478 PHILSKAPSAELKPGQRDQDSLPPYDILDGILARMIDRHQSDQEIAAAGYDLDLVQHVRR 537 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ +E+KR+QA G KIT ++FG PI+ ++ Sbjct: 538 MVQRAEFKRQQAAPGLKITDRAFGSGWRMPIAAQW 572 >gi|224283338|ref|ZP_03646660.1| Putative amidohydrolase [Bifidobacterium bifidum NCIMB 41171] gi|313140489|ref|ZP_07802682.1| glutamine-dependent NAD synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313132999|gb|EFR50616.1| glutamine-dependent NAD synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 565 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 214/579 (36%), Positives = 316/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+AQ++ VGD+ GN K A +G +++F E+ ++GYP EDL +++ Sbjct: 1 MTHLRFALAQIDTCVGDLDGNADKIMHYAHLAAHEGAHVVIFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G G + VG D + N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELEADGLGDLYVAVGTVGTDHASDKPRNRMVVLHDGMVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + +R+G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFAAGDRTVVLDIDGVRIGVAICEDIWQDGGPVARLADEHIDVLMTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R+++ + + V P+IYVNQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTHTRYDLAVRRAAEVGAPMIYVNQVGGQDDLVFDGGSFVVDRDGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + D + ++D + Y ACVL L+DY+ KN F V Sbjct: 241 MEHLGLFDLDTDAEHQTTGDIADLPDPDEEV--------YTACVLGLKDYMAKNRFSGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G NV I +P Y+S S +DAA A +G YDV PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGHNVHGISMPSMYSSIGSKDDAADLAANIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + N + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PMFNVYQGQL------KLEGVAAENLQARIRGVIVMAYSNSLGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----------------NSHGITSGLGPLTEV 459 T+YGD GG+ P+KDL KT+V++L+ WR N +G P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWELSRWRNRAAAAGVGIGGLRIVGNENGDAGTPLPGGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++++TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYELLDKVLAAYIEHAHGRADLLADGFDEKTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|76809184|ref|YP_332653.1| NAD synthetase [Burkholderia pseudomallei 1710b] gi|126451553|ref|YP_001065369.1| NAD synthetase [Burkholderia pseudomallei 1106a] gi|242316719|ref|ZP_04815735.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1106b] gi|254259592|ref|ZP_04950646.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1710a] gi|76578637|gb|ABA48112.1| glutamine dependent NAD+ synthetase [Burkholderia pseudomallei 1710b] gi|126225195|gb|ABN88735.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1106a] gi|242139958|gb|EES26360.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1106b] gi|254218281|gb|EET07665.1| glutamine-dependent NAD(+) synthetase [Burkholderia pseudomallei 1710a] Length = 566 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 228/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 120 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 289 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 ADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|237811352|ref|YP_002895803.1| glutamine-dependent NAD+ synthetase [Burkholderia pseudomallei MSHR346] gi|237506688|gb|ACQ99006.1| glutamine-dependent NAD+ synthetase [Burkholderia pseudomallei MSHR346] Length = 566 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 228/581 (39%), Positives = 333/581 (57%), Gaps = 39/581 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ---------DQEG------------VLNS 99 F A +A+ L + G ++VG P + D N+ Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRAAGAGASSADGNANRPIERGAAPVDTYNA 119 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 120 ASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HASA 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGG 238 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC 279 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 SFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRAL 288 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S DA Sbjct: 289 VLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTDA 348 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 ADMAKRVGVRYDEIAIAPMFDAFRTSLAAEFAGLAEDATEENIQARIRGTLLMALSNKFG 408 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L +V Sbjct: 409 SIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----DV 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYV 518 IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ V Sbjct: 465 IPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKRV 524 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 TRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 565 >gi|289209199|ref|YP_003461265.1| NAD+ synthetase [Thioalkalivibrio sp. K90mix] gi|288944830|gb|ADC72529.1| NAD+ synthetase [Thioalkalivibrio sp. K90mix] Length = 564 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 217/566 (38%), Positives = 323/566 (57%), Gaps = 28/566 (4%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A+AQ+NP+VG + N A E+A G ++F EL ++GYPPEDL+ + +F++A Sbjct: 9 LALAQINPIVGGLDTNRHLIEDAIEQARAAGARAVVFPELALTGYPPEDLLLRPAFLRAV 68 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 ++ + G +++G P ++G++N+ + L G IA K LPNYS F E+ Sbjct: 69 EQSLAAITRSVA--GIDVILGAPVPTEKGLVNAALWLRDGREIARYAKQVLPNYSVFDEQ 126 Query: 127 RTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKK 186 R F++G + R+G+ +CEDIW+ + AE + +LNASPY+ K ++ Sbjct: 127 RYFVAGDQACVVELAGWRIGLTVCEDIWQAAPAAAAQAAG-AELILNLNASPYHRGKAEE 185 Query: 187 RHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWH 246 R ++V +++ P++YVNQVGGQDEL+FDG SF D + ++ + + Sbjct: 186 RLQVVGARVAETGCPVVYVNQVGGQDELVFDGRSFVHDAAHGARAVLPAWATGYALVQGR 245 Query: 247 YD------------QQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 LS + + Y A ++ +RDYV KN F Sbjct: 246 RGPSGIELQPRPETMHLSACGIRPTLTDPGPEPDEADARDLYQALMIGIRDYVAKNGFPG 305 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++GLSGGIDS L AA+AVDALG V +M+PY+YT+ S+EDA A A+ LG +Y + Sbjct: 306 VLLGLSGGIDSGLTAALAVDALGPAAVTAVMMPYRYTASMSIEDAEAQARLLGIEYHEIA 365 Query: 355 IHDLVNHFFSLMSQFLQEEPS---GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I +V F +S P+ + EN+QSR RG +LMALSN S +LL T NKSE+ Sbjct: 366 IEPMVQDFLEGLSPAFDAMPAHAGDVTEENLQSRARGVLLMALSNRSGKLLLATGNKSEM 425 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY TLYGDM+GGF PLKD+ K V++LA WRN+ G IP ++E+ PSA Sbjct: 426 AVGYSTLYGDMNGGFAPLKDVSKQWVYRLARWRNTRGAA---------IPERVIERPPSA 476 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRR 530 EL P Q D +SLPPY +LD +++ VE E S ++ TV + L++ +EYKRR Sbjct: 477 ELAPDQKDADSLPPYEVLDAVLEAFVEQERSVEEIVADGFDHATVERIARLVFRAEYKRR 536 Query: 531 QAPVGTKITAKSFGRDRLYPISNKFR 556 QAP G +++ ++FGRDR YPI++ +R Sbjct: 537 QAPPGVRVSRRAFGRDRRYPITSGYR 562 >gi|325519658|gb|EGC98995.1| NAD synthetase [Burkholderia sp. TJI49] Length = 562 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 225/577 (38%), Positives = 326/577 (56%), Gaps = 35/577 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGV-----------------LNSVVIL 103 F A + A+ L G ++VG P + GV N+V ++ Sbjct: 60 FYAAAADALIALADALKAFDGLAVLVGHPLRGAPGVDGNANGPIERGMPPTDTYNAVSLI 119 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 G I+ K +LPN F EKR F + +R G++ICED W +++ + Sbjct: 120 VGGAIVGTYRKQDLPNADVFDEKRYFATDAEPLVFELGGVRYGVIICEDAW-HASAAQIA 178 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+FDG SF Sbjct: 179 KAAGAQVLLIPNGSPYHMNKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 238 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 D Q L +M F E + + E+ + + L E Y A VL + Sbjct: 239 DAQGALVAKMPQFDEGHAIVEFD----------GARPLPGAIAPELPLEAQVYRALVLGV 288 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P +YT+ S DAA A Sbjct: 289 RDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAAEMA 348 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + +G +YD + I + + F + +++ ENIQ+RIRG +LMALSN +++L Sbjct: 349 RRVGVRYDEIAIAPMFDAFRASLAEEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVL 408 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN L +VIP Sbjct: 409 TTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNETTDY----ALRDVIPER 464 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLL 522 IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V V L+ Sbjct: 465 ILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAPADVARVTRLI 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 KINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 561 >gi|254450479|ref|ZP_05063916.1| glutamine-dependent NAD(+) synthetase [Octadecabacter antarcticus 238] gi|198264885|gb|EDY89155.1| glutamine-dependent NAD(+) synthetase [Octadecabacter antarcticus 238] Length = 561 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 230/562 (40%), Positives = 337/562 (59%), Gaps = 13/562 (2%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP VGDIAGN KAR A E+ G D+++ E+F+ GY +DL+ K Sbjct: 6 MSDRFRLTMAQLNPTVGDIAGNAEKARVAWEQGRAAGADMVMLPEMFLVGYQTQDLIMKP 65 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F + ++ + L + DG + +G P ++ + + N+ +L AG II+ K LPN+ Sbjct: 66 AFERDAAAQLAQLAAACADGPM-LGIGGPLREGDKLRNAYFVLKAGKIISTTRKFFLPNF 124 Query: 121 SEFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 + F E R F P +R+G ICED W ++C+ + + GAE L N Sbjct: 125 NVFDEVRLFSRADMQGPFSTGGDAGSLRIGTPICEDAW-YPDVCEAMVESGAEMLLVPNG 183 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY+ +K R + +++ +P++Y+N VGGQD+ +FDG SF + LA QM F Sbjct: 184 SPYFRDKFSVRLNQMVARVTECDVPLVYLNMVGGQDDQVFDGGSFVLNRHGALAVQMPWF 243 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E H D + ++++D + E + Y A V++LRDY+ K F KV+ Sbjct: 244 EEAV----AHVDFVRTDAGWVAEDGDKNLEPDTMETD--YAAMVMALRDYMAKTGFKKVL 297 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGG+DSA+ AAIA DALG +NV+ +M+P +YTS SL+DA A A ALG +YDV+ I Sbjct: 298 LGLSGGVDSAIVAAIAADALGPDNVRCVMMPSEYTSDASLDDAKAAAAALGVRYDVVAIG 357 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 ++ G+ ENIQSRIRG +LMA SN MLLTT NKSE++VGY Sbjct: 358 ATRAAVTQTLAPLFAGLDDGLTEENIQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYA 417 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T+YGDM+GG+NP+KDLYKT+VF + WRN++ P E+IP +I++K PSAELR Sbjct: 418 TIYGDMAGGYNPIKDLYKTRVFDICRWRNANHRPWMNAPAGEMIPVAIIDKPPSAELRDD 477 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D +SLP Y +LD I+ +V+++ S + Y+ V+ +EHLLY SEYKR Q+ G Sbjct: 478 QKDSDSLPEYDVLDGILTLLVDDDASVADCVAAGYDRAVVKKIEHLLYISEYKRFQSAPG 537 Query: 536 TKITAKSFGRDRLYPISNKFRD 557 +++ K+F DR YPI N++RD Sbjct: 538 PRLSMKAFWLDRRYPIVNRWRD 559 >gi|167901780|ref|ZP_02488985.1| NAD synthetase [Burkholderia pseudomallei NCTC 13177] Length = 567 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 228/582 (39%), Positives = 333/582 (57%), Gaps = 40/582 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN+AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQ----------DQEG------------VLN 98 F A +A+ L + G ++VG P + D N Sbjct: 60 FYAASDAALAALAAQLKPLAGLAVLVGHPLRVAGGAAASSADGNANRPIERGAAPVDTYN 119 Query: 99 SVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN 158 + ++ G ++ K +LPN F EKR F + + +R G++ICED+W +++ Sbjct: 120 AASLIVGGEVVGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVRFGVVICEDVW-HAS 178 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDG 218 + K GA+ L N SPY+ +K R +I+ +I LP++YVN VGGQDEL+FDG Sbjct: 179 AAQLAKAAGAQVLIVPNGSPYHMHKEAVRIDILRARIRETGLPMVYVNLVGGQDELVFDG 238 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA 278 SF DG +L +M F E + + E+ + + + L E Y A Sbjct: 239 GSFVLDGAGELVAKMPQFEEGHAIVEFD----------GARALPAPIAPALPVEAQVYRA 288 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 VL +RDY+ KN F I+GLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S D Sbjct: 289 LVLGVRDYIGKNGFPGAIVGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADISTTD 348 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 AA AK +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 AADMAKRVGVRYDEIAIAPMFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKF 408 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ L + Sbjct: 409 GSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGAL----D 464 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRY 517 VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y + V+ Sbjct: 465 VIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAEADVKR 524 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 VTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFIESI 566 >gi|311742909|ref|ZP_07716717.1| NAD synthetase [Aeromicrobium marinum DSM 15272] gi|311313589|gb|EFQ83498.1| NAD synthetase [Aeromicrobium marinum DSM 15272] Length = 623 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 205/597 (34%), Positives = 294/597 (49%), Gaps = 50/597 (8%) Query: 3 KKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSF 62 +L++A+AQ+N VVG I N+ A+ G L++ E+ ++GYP ED+ ++ +F Sbjct: 37 PQLRLALAQINAVVGAIDTNVELVLEQCRRAHAAGAHLVVTPEMVLTGYPIEDMAYRATF 96 Query: 63 IQACSSAIDTLKSDTHDGGA---GIVVGF------------PRQDQ---EGVLNSVVILD 104 I A A+ L + G +VVG P + NS ++ Sbjct: 97 ITASQRAVAELAARLEADGLGELVVVVGHLDSAKPPTLEAVPDRLGVPKNAPTNSASVIT 156 Query: 105 AGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 G I+ DK +LPNY F E R F++G + + + I ICEDIW++ + Sbjct: 157 GGRIVTRYDKHHLPNYGVFDEFRHFVAGDETQVVQVGGVDVAIAICEDIWQD-GPSAAAR 215 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 A L LN SPY K R E+ + + YVN VGGQDEL+FDG + D Sbjct: 216 AAEAGLLVVLNGSPYEAAKDDVRLELCARRAREGECAVAYVNLVGGQDELVFDGDTLVVD 275 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS---------------------DDSAS 263 +L + F + + + D S Sbjct: 276 AGGELLARAPQFETDLLVVDLDLPAATAPMPDPETRFHGLRVERHVVTSEPVPAFDPRPS 335 Query: 264 TMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQT 323 + + Y A VL LRDYV KN F V++GLSGGIDS L AIAVDALG + V Sbjct: 336 AIADRWDDLGERYQAVVLGLRDYVAKNGFTSVLMGLSGGIDSTLVGAIAVDALGADRVFG 395 Query: 324 IMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQ 383 + P ++S S DAA A+ G D +PI + + + +S G+ EN+Q Sbjct: 396 VSNPSDWSSEHSRSDAAELARRTGLHLDTVPISPVFDALQAQLS------LDGLAEENLQ 449 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASW 443 +RIR I M LSN ++L NKSE++ GY T+YGD GG+ P+KDL KT V+ LA W Sbjct: 450 ARIRAVIWMGLSNQHGHLVLACGNKSELATGYSTIYGDAVGGYAPIKDLPKTLVWDLARW 509 Query: 444 RNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF 503 RN+ G P IP + K PSAELRP Q D +SLPPY +LD I+ VE + Sbjct: 510 RNAWSTERGETP---PIPEDTITKPPSAELRPGQLDTDSLPPYELLDAILDAYVERDLGA 566 Query: 504 IN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 ++ ++ E V+ V L+ +EYKRRQ P G K++ ++FGRDR PI+N++R+ + Sbjct: 567 TEVIEEGFDPELVQRVVTLVDRAEYKRRQYPPGPKVSRRNFGRDRRVPITNRWRESL 623 >gi|299531605|ref|ZP_07045010.1| NAD+ synthetase [Comamonas testosteroni S44] gi|298720321|gb|EFI61273.1| NAD+ synthetase [Comamonas testosteroni S44] Length = 548 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 221/557 (39%), Positives = 321/557 (57%), Gaps = 15/557 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L I AQ N VVGD++GN+ K A EA G L+L EL + GY EDL + +F+ Sbjct: 2 TLSICCAQRNFVVGDLSGNVQKIIAAAAEAYANGARLLLTPELALCGYAAEDLYLRPAFL 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNY 120 +AC +A+ L+ + G +V+G P++D++G + N+ +L G IA K LPN+ Sbjct: 62 EACDAALQQLQQASAQWPGLALVIGHPQRDEQGEKLFNAASVLRDGQQIARYFKQLLPNF 121 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E+R F +G + I++G+LICED W + A+ L +NASP++ Sbjct: 122 GVFDEQRYFAAGEESCVFELEGIQIGLLICEDAWHAGPAHAAVAAG-AQLLLVINASPFH 180 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K +R ++ + +P++YV+ VGGQDE++FDG SF Q+A + F E+ Sbjct: 181 SGKPLEREAVIAQRAVENAVPLVYVHLVGGQDEVVFDGCSFAVQADGQVAARAAAFEEEL 240 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 M + L A ++A VLS+RDYV KN F +IGLS Sbjct: 241 PMVAALLVDGCVTL-------MGQVKPQLNHHHALWSALVLSVRDYVGKNRFPGALIGLS 293 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GG+DSAL AIAVDALG + V+T+M+P YT+ S DA ++ +G +++ + I Sbjct: 294 GGMDSALVLAIAVDALGADKVRTVMMPSPYTADISWLDAREMSERVGVQHEEIDIAPQFE 353 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ EN+Q+RIRG +LMA+SN +++LTT NKSE+S GY TLYG Sbjct: 354 AFKAALAGTFAGRAEDTTEENLQARIRGTLLMAMSNKFGSIVLTTGNKSEMSTGYCTLYG 413 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF +KD++KT+VF LA WRN++ G + IP I+ + PSAELRP Q DQ Sbjct: 414 DMAGGFAVIKDVFKTEVFALARWRNANDP---FGTGLDPIPERIITRPPSAELRPDQKDQ 470 Query: 481 ESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLP Y +LD I+ R +EN ES + + + V V L+ +EYKRRQAPVG ++T Sbjct: 471 DSLPDYEVLDAIVSRYMENNESISSIVAEGFAPADVERVTRLIQINEYKRRQAPVGPRLT 530 Query: 540 AKSFGRDRLYPISNKFR 556 +SFG+D YPI+NKFR Sbjct: 531 MRSFGKDWRYPITNKFR 547 >gi|103488420|ref|YP_617981.1| NAD synthetase [Sphingopyxis alaskensis RB2256] gi|98978497|gb|ABF54648.1| NH(3)-dependent NAD(+) synthetase [Sphingopyxis alaskensis RB2256] Length = 556 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 248/557 (44%), Positives = 343/557 (61%), Gaps = 13/557 (2%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 L I ++Q+ VGD+A N R A + DLIL+ EL + GYPPEDLV K + Sbjct: 7 TLTIVLSQMTQAVGDLAANADAMRSV--RARHRDADLILYPELQLIGYPPEDLVLKPALA 64 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG-VLNSVVILDAGNIIAVRDKINLPNYSE 122 + ++ + L +DT DGG ++VG +D +G + N V +LD G ++AVR K LPNY Sbjct: 65 ERAATLLAELAADTADGGPAMLVGSVERDADGSLYNIVALLDGGRVVAVRRKHELPNYGT 124 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F EKR F G D + +R ++LG+ ICED W + HL QGAE L S+N SPY + Sbjct: 125 FDEKRVFAPGPLPDIVEWRGVKLGLPICEDGWLPK-VSAHLAAQGAELLISVNGSPYEID 183 Query: 183 KLKKR-HEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K ++R ++ +++ LP+I++N++GGQDEL+FDG SF +G A ++ + + Sbjct: 184 KDERRLSQVFARRVAETGLPLIFLNRIGGQDELVFDGCSFVLNGDGTAAHRLTDWEAEER 243 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 +T W + + W + A P Y+A +LSLRDYV +N F V++GLSG Sbjct: 244 VTRWT--KGAAGWACDAGAIAEWEAHPAD----IYSAMILSLRDYVTRNRFPGVVLGLSG 297 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSA+CAAIA DALG + V +MLP ++TS SL+DAA CA+ +GC+ D +PI V Sbjct: 298 GIDSAICAAIAADALGPDKVWCVMLPSRFTSQASLDDAAGCARMIGCRLDTIPIVPAVEA 357 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F +++ + I EN+QSRIRG LMALSN MLLTT NKSE+SVGY T+YGD Sbjct: 358 FDQMLAGSFADAEVDITEENVQSRIRGVTLMALSNKFGPMLLTTGNKSEMSVGYATIYGD 417 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GG+NPLKD YK VF LA WRN H P+ V+P +I+ K PSAELRP Q DQ+ Sbjct: 418 MAGGYNPLKDAYKMTVFALAKWRNEHVPRLSRNPVAPVMPDTIITKPPSAELRPDQKDQD 477 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQ--EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 SLPPY LD ++ +VE E + ++ + V +E LL +EYKRRQAP G K++ Sbjct: 478 SLPPYEDLDRMLHMLVEEEAGVDDVVARHGFDRDAVARIERLLAIAEYKRRQAPPGVKLS 537 Query: 540 AKSFGRDRLYPISNKFR 556 ++FGRDR YPI++ FR Sbjct: 538 TRNFGRDRRYPITHGFR 554 >gi|206560956|ref|YP_002231721.1| NAD synthetase [Burkholderia cenocepacia J2315] gi|198036998|emb|CAR52919.1| putative glutamine-dependent NAD synthase [Burkholderia cenocepacia J2315] Length = 572 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 222/587 (37%), Positives = 327/587 (55%), Gaps = 45/587 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQ---------------DQEG---------- 95 F A ++A+D L G ++VG P + D Sbjct: 60 FYAAAAAALDALADALKAFDGLAVLVGHPLRGAGSGAGSGPGASAVDGNANRPIERGVPP 119 Query: 96 --VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 N+V ++ G I+ K +LPN F EKR F + ++ G++ICED Sbjct: 120 TDTFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDTEPLVFELNGVKYGVIICEDA 179 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDE Sbjct: 180 W-HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGGQDE 238 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEE 273 L+FDG SF DG L +M F E + + E+ + + L + Sbjct: 239 LVFDGGSFVLDGAGALVAKMPQFDEGHAIVEFD----------GARPLPGAIAPELSTDA 288 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P ++T+ Sbjct: 289 QVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRFTAD 348 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 S DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMA Sbjct: 349 ISTTDAAEMARRVGVRYDEIAIAPMFDAFRAALAGEFAGRAEDATEENIQARIRGTLLMA 408 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 409 LSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATADYG-- 466 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYND 512 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 467 --LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQ 524 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 ADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 571 >gi|30249848|ref|NP_841918.1| carbon-nitrogen hydrolase:NAD+ synthase [Nitrosomonas europaea ATCC 19718] gi|30180885|emb|CAD85807.1| Carbon-nitrogen hydrolase:NAD+ synthase [Nitrosomonas europaea ATCC 19718] Length = 535 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 217/557 (38%), Positives = 318/557 (57%), Gaps = 26/557 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+N GD+ GN K A +A G DL++ E+ + GY ED + ++ F+Q Sbjct: 1 MKIALAQINCTPGDLRGNQLKILHACRQAREAGADLVITPEMSLCGYLAEDWLLRREFVQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC A+ L + ++VG P + N+V + G ++A K +L + Sbjct: 61 ACHQALTELTAQV--YDVTLIVGHPHNMNGNLFNAVSAVRDGRLLATHCKQHLFSDRLQD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F +G S I G++ D ++++ + L GA+ L +++ASPY + Sbjct: 119 ERRYFSAGNSLCTFECSGILFGLMTGSD-YRHAAHLQSLHAAGAQVLLAVDASPYSIDSQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R++I+ I+ LP +Y+N VGGQDEL+FDGASF D +L Q+ F E + Sbjct: 178 IDRYQILREGITQTGLPAVYINPVGGQDELVFDGASFAMDHSGKLVCQLPAFQEALALIA 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 H +Q + D A ++ Y A L L D++ KN V+IGLSGG+D Sbjct: 238 IHGNQSIFGECSTLPDQAGSI----------YTALRLGLHDFITKNRLPGVLIGLSGGVD 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG E V+T+M+P YT+ S++DA A LG ++ +PI L + F Sbjct: 288 SALVLAIAVDALGAERVRTVMMPSPYTADISIQDAQTMADNLGVRHAGIPITGLFDQFQQ 347 Query: 365 LMSQFLQ---EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + LQ + + EN+Q+RIRG +LMAL+N S ++L TSNKSE +VGY TLYGD Sbjct: 348 ALQAELQACSDSGTSATVENLQARIRGTLLMALANQSGMLVLPTSNKSETAVGYSTLYGD 407 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF+ LKD+ KT V++L +RN ++ +IP IL++ PSAELRP Q DQ+ Sbjct: 408 MAGGFSILKDVSKTLVYRLCHYRNQ---------ISPIIPQRILQRPPSAELRPGQIDQD 458 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY +LD II+ VEN+ S Y +ETVR V +++ SEYKRRQA G +IT Sbjct: 459 SLPPYDVLDAIIEAYVENDLSAAEIIAMNYPEETVRRVLRMIHSSEYKRRQAAPGIRITR 518 Query: 541 KSFGRDRLYPISNKFRD 557 + FGR +P+++ F D Sbjct: 519 RDFGRSWRFPLTSGFPD 535 >gi|23336330|ref|ZP_00121552.1| COG0171: NAD synthase [Bifidobacterium longum DJO10A] gi|23465526|ref|NP_696129.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium longum NCC2705] gi|189439558|ref|YP_001954639.1| putative amidohydrolase [Bifidobacterium longum DJO10A] gi|239621932|ref|ZP_04664963.1| NAD/ synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132967|ref|YP_004000306.1| amidohydrolase [Bifidobacterium longum subsp. longum BBMN68] gi|322688881|ref|YP_004208615.1| NAD+ synthase [Bifidobacterium longum subsp. infantis 157F] gi|23326187|gb|AAN24765.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium longum NCC2705] gi|189427993|gb|ACD98141.1| Putative amidohydrolase [Bifidobacterium longum DJO10A] gi|239515123|gb|EEQ54990.1| NAD/ synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311773950|gb|ADQ03438.1| Putative amidohydrolase [Bifidobacterium longum subsp. longum BBMN68] gi|320460217|dbj|BAJ70837.1| NAD+ synthase [Bifidobacterium longum subsp. infantis 157F] Length = 565 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 215/579 (37%), Positives = 318/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W +D + + + L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSAAEHQ------AKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L N + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFNAYQQQL------DLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV----------------- 459 T+YGD GG+ P+KDL KT+V++++ WRN ++ Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGIPLKDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++ TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|306822540|ref|ZP_07455918.1| NAD synthetase [Bifidobacterium dentium ATCC 27679] gi|309801413|ref|ZP_07695540.1| NAD+ synthase [Bifidobacterium dentium JCVIHMP022] gi|304554085|gb|EFM41994.1| NAD synthetase [Bifidobacterium dentium ATCC 27679] gi|308221928|gb|EFO78213.1| NAD+ synthase [Bifidobacterium dentium JCVIHMP022] Length = 565 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 208/579 (35%), Positives = 310/579 (53%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++ A+AQ++ VGD+ N K A Q +++F E+ ++GYP EDL + + Sbjct: 1 MTDIRFALAQIDTCVGDLDANADKVMHYAHLAAAQHAKVVVFPEMILTGYPIEDLALRGT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFP--RQDQEGVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G +VVG ++ N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELAADGLDDLFVVVGTVGTDRENSKPRNRLVVLHDGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F G + + R+G+ ICEDIW++ L KQ + L ++N Sbjct: 121 LPNYGVFDEFRIFSPGNKSMVLDVDGARIGVAICEDIWQDGGPVAELAKQDIDLLLTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R ++ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTDTRFDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFTVDADGTLLQRSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + + ++D + Y ACVL L+DY+ KN+F V Sbjct: 241 MEDLALFDLDTTAERQSIGVIADKPDPDEEV--------YTACVLGLKDYMAKNHFKGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA+G NV I +P Y+S S +DAA A +G YD+ PI Sbjct: 293 LGLSGGIDSALVAAMAADAVGGNNVYGISMPSMYSSDGSKDDAADLANNIGAHYDIQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFVAYQKQL------DLEGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLG-----------------PLTEV 459 T+YGD GG+ P+KDL KT+V++++ WRN P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNESGSAGVPLPDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP + +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + +++ TV V Sbjct: 467 IPVNSIEKAPSAELRPGQKDSDSLPEYALLDQVLAMYIEHAHGRADLLADGFDEATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|322690856|ref|YP_004220426.1| NAD+ synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320455712|dbj|BAJ66334.1| NAD+ synthase [Bifidobacterium longum subsp. longum JCM 1217] Length = 565 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 215/579 (37%), Positives = 318/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W +D + + + L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSAAEHQ------AKAEIVPELGPDEEVYTACVLGLKDYMAKNHFTGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L N + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFNAYQQQL------DLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV----------------- 459 T+YGD GG+ P+KDL KT+V++++ WRN ++ Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIAGNEDGNTGIPLKDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++ TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|114331974|ref|YP_748196.1| NAD+ synthetase [Nitrosomonas eutropha C91] gi|114308988|gb|ABI60231.1| NAD+ synthetase [Nitrosomonas eutropha C91] Length = 535 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 219/556 (39%), Positives = 308/556 (55%), Gaps = 26/556 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+N + GD+ GN K A ++A G L++ E+ + G PED + + F+Q Sbjct: 1 MKIALAQINCMAGDLNGNPLKILHACQQAREAGARLVITPEMALCGSLPEDWLLRAEFVQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A+ L + HD +V+G P + +LN+V ++ G ++ K +L Sbjct: 61 VCHQALMDLATQIHD--VTLVIGHPHRTNGNLLNAVSVIRDGRLLITYGKNHLLTDPLLD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E+R F G G+ D +++ + L+ + L ++ ASPY + Sbjct: 119 ERRYFTPGNQPCTFECDGTLFGLTTFSD-YQHPAHLQALRSADVQVLLTVGASPYAIDGQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R IV I+ LP +Y N VGGQDEL+FDGASF D +L Q+ F E + E Sbjct: 178 ADRLRIVRAGITQTGLPTVYTNLVGGQDELVFDGASFAMDHSGKLVCQLAAFQETLGLIE 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 H +Q + D ++ Y+A L LRD++ KN V+IGLSGG+D Sbjct: 238 LHNNQLIPGQCSPLPDRIESV----------YSALRLGLRDFIDKNRISGVLIGLSGGVD 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG + V +M+P YT+ SLEDA A LG Y +PI +L F Sbjct: 288 SALVLAIAVDALGADRVSNVMMPSPYTADISLEDAQIMAGNLGVHYTEIPITELFEQFKQ 347 Query: 365 LMSQFLQEEPS---GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + LQ P+ EN+Q+RIRG +LMAL+N S ++LTTSNKSE +VGY TLYGD Sbjct: 348 TLHPALQTYPATGPQTTMENLQARIRGTLLMALANQSGRLVLTTSNKSETAVGYSTLYGD 407 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF+ LKD+ KT V+QL +RN ++ +IP IL++ PSAELRP QTDQ+ Sbjct: 408 MAGGFSILKDVSKTLVYQLCHYRNR---------ISPIIPERILQRPPSAELRPDQTDQD 458 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 +LPPY +LD II VEN S Y +ETVR V H+++ EYKRRQA G +IT Sbjct: 459 NLPPYAVLDAIIAAYVENNLSPAEIIAMNYPEETVRQVLHMIHSCEYKRRQAAPGIRITR 518 Query: 541 KSFGRDRLYPISNKFR 556 + FG +PI++ FR Sbjct: 519 RDFGPSWRFPITSGFR 534 >gi|227546012|ref|ZP_03976061.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227213646|gb|EEI81495.1| possible NAD(+) synthase (glutamine-hydrolyzing) [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 565 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 216/579 (37%), Positives = 318/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W +D + + + L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSAAEHQ------AKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L N + + + GI AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFNAYQQQL------DLDGISAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV----------------- 459 T+YGD GG+ P+KDL KT+V++++ WRN ++ Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGIPLKDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++ TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|107023349|ref|YP_621676.1| NAD synthetase [Burkholderia cenocepacia AU 1054] gi|116690432|ref|YP_836055.1| NAD synthetase [Burkholderia cenocepacia HI2424] gi|105893538|gb|ABF76703.1| DNA-directed RNA polymerase, subunit H [Burkholderia cenocepacia AU 1054] gi|116648521|gb|ABK09162.1| DNA-directed RNA polymerase, subunit H [Burkholderia cenocepacia HI2424] Length = 572 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 221/587 (37%), Positives = 326/587 (55%), Gaps = 45/587 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG------------------------- 95 F A ++A+D L G ++VG P + Sbjct: 60 FYAAAAAALDALADALKAFDGLAVLVGHPLRGPGSGAGDDARASAVDGNANRPIERGVPP 119 Query: 96 --VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDI 153 N+V ++ G I+ K +LPN F EKR F + ++ G++ICED Sbjct: 120 TDTFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDTEPLVFELNGVKYGVIICEDA 179 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE 213 W +++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDE Sbjct: 180 W-HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGGQDE 238 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEE 273 L+FDG SF DG+ L +M F E + + E+ + + L + Sbjct: 239 LVFDGGSFVLDGEGGLVAKMPQFDEGHAIVEFD----------GARPLPGAIAPELSTDA 288 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A V +RDY+ KN F V+IGLSGG+DSAL A+A DALG E V+ +M+P ++T+ Sbjct: 289 QVYRALVTGVRDYIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRFTAD 348 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 S DAA A+ +G +YD + I + + F ++ ENIQ+RIRG +LMA Sbjct: 349 ISTTDAAEMARRVGVRYDEIAIAPMFDAFRVALAGEFAGRAEDATEENIQARIRGTLLMA 408 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ Sbjct: 409 LSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATTDYG-- 466 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYND 512 L +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y Sbjct: 467 --LRDVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQ 524 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 ADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 571 >gi|291517073|emb|CBK70689.1| NAD+ synthetase [Bifidobacterium longum subsp. longum F8] Length = 565 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 215/579 (37%), Positives = 317/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGNAQVVVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKNSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W +D + + + L +E Y ACVL L+DY+ KN F V Sbjct: 241 MEN--LTFWDFDSAAEHQ------AKAEIVPELDPDEEVYTACVLGLKDYMAKNRFTGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L N + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFNAYQQQL------DLDGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV----------------- 459 T+YGD GG+ P+KDL KT+V++++ WRN ++ Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGIPLKDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++ TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQVTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|239979142|ref|ZP_04701666.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces albus J1074] gi|291451019|ref|ZP_06590409.1| NAD(+) synthase [Streptomyces albus J1074] gi|291353968|gb|EFE80870.1| NAD(+) synthase [Streptomyces albus J1074] Length = 585 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 217/592 (36%), Positives = 311/592 (52%), Gaps = 45/592 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+ GN EA +G L+ F E+ ++GYP EDL + S Sbjct: 1 MHRLRLALNQIDATVGDLHGNADAVVHRTREAAERGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQD----------QEGVLNSVVILDAGNI 108 F++A SA+ L + D G G +VVG+ + N+ +L G + Sbjct: 61 FVEASRSALVALAARLADEGLGDMPVVVGYLDRSSTAQPRYGQPAGAPQNAAAVLHGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + K +LPNY F E R F+ G + I R + + + ICED+W+ + GA Sbjct: 121 VLSFAKHHLPNYGVFDEFRYFVPGDTMPVIRVRGVDVALAICEDLWQEGGRVPAARAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY K R E+V + YV GGQDEL+FDG + D Sbjct: 181 GLLLSVNASPYEREKDDTRLELVRKRAQEAGCATAYVAMTGGQDELVFDGDTIVVDASGA 240 Query: 229 LAFQMKHFSEQNFM------------TEWHYDQQLSQWNYM----------SDDSASTMY 266 + + F+E + E D L + + T Sbjct: 241 VLARAPQFTEVQLVLDLDLPAAAADAPEGTVDDGLRIDRVILSGEPVAGPGPVEYPGTTV 300 Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 PL ++E Y A V LR YV+KN F V+IGLSGGIDSAL AA+AVDA+G E+V + + Sbjct: 301 PPLDDDEEVYRALVTGLRAYVRKNGFRSVLIGLSGGIDSALTAALAVDAIGAEHVYGVSM 360 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P KY+S S +DAA A+ G Y + I + + + + +G+ EN+QSR+ Sbjct: 361 PSKYSSEHSKDDAAELARRTGLHYRTVSIAPMFDAYMGELG------LTGLAEENLQSRL 414 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YK+ VF+LA WRN Sbjct: 415 RGTTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKSTVFRLARWRNE 474 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 G P IP + + K PSAELRP Q D +SLP Y +LD I+ R V+ +E Sbjct: 475 VAAERGETP---PIPENSVTKPPSAELRPGQVDTDSLPDYDVLDAILARYVDRDEGRDEI 531 Query: 507 -DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ ETV V L+ +EYKRRQ P GTKI+AK FG+DR PI++++R+ Sbjct: 532 LAAGFDPETVTRVLKLVDNAEYKRRQYPPGTKISAKGFGKDRRLPITSRWRE 583 >gi|255019805|ref|ZP_05291881.1| NAD synthetase / Glutamine amidotransferase chain of NAD synthetase [Acidithiobacillus caldus ATCC 51756] gi|254970734|gb|EET28220.1| NAD synthetase / Glutamine amidotransferase chain of NAD synthetase [Acidithiobacillus caldus ATCC 51756] Length = 548 Score = 551 bits (1421), Expect = e-154, Method: Composition-based stats. Identities = 225/553 (40%), Positives = 317/553 (57%), Gaps = 18/553 (3%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQ N VGD+AGN+ + R A G +L++ EL + GYPPEDL+ + F+ Sbjct: 1 MRIAIAQCNLWVGDVAGNVRRLLREAGAAREAGAELLITPELALCGYPPEDLLLRDDFLD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C++ ++ L T ++VG P++ + N+ ++ G I+A K LPNY F Sbjct: 61 CCATGLEDLARRT---PLPLLVGHPQRHGGALFNAASLVQEGRIVASYHKHCLPNYRVFD 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E R F +G + + +G+LICEDIW + + + GAE + LNASPY+ K Sbjct: 118 ELRYFRAGQQAVVLPLGGVLVGVLICEDIWCDEDALTACQALGAEVVVVLNASPYHRGKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 ++R E++ + H LP++Y N VGGQDEL+FDG SF D + ++ + FSE + + Sbjct: 178 REREELLVRRARHARLPLVYANAVGGQDELVFDGGSFAVDAEGRICGRAPQFSEDLLLLD 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 S +A PL++ Y A +L LRDYV+KN F V++GLSGG+D Sbjct: 238 LERSSTGSVVVRGGVTAA-----PLEDLAEVYGALMLGLRDYVEKNGFPGVVLGLSGGVD 292 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIA DALG E V +++P YT+ S+EDA A A LG + +LPIH L + + Sbjct: 293 SALTLAIAADALGPERVDALIMPSPYTADMSIEDARAEAATLGVRSHLLPIHGLFAEYQN 352 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + + EN+Q+RIR +LMA SN +LLTT NKSE +VGY TLYGDM+G Sbjct: 353 SLRETFAGRAADTTEENLQARIRAALLMAFSNKFGPLLLTTGNKSETAVGYSTLYGDMAG 412 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF +KD KT ++ LA +RN G IP +L ++P+AEL P QTDQ+SLP Sbjct: 413 GFALIKDCPKTLIYALARYRNGRGPA---------IPERVLTRAPTAELAPGQTDQDSLP 463 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PYP LD II VE + S + TV V L+ +EYKRRQ G +I+ SF Sbjct: 464 PYPELDAIITAYVEEDRSLAEIVAAGHAPATVERVLRLVQMAEYKRRQGAPGVRISRLSF 523 Query: 544 GRDRLYPISNKFR 556 G+DR YPI+N FR Sbjct: 524 GKDRRYPITNGFR 536 >gi|332702582|ref|ZP_08422670.1| NAD+ synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332552731|gb|EGJ49775.1| NAD+ synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 551 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 201/570 (35%), Positives = 299/570 (52%), Gaps = 36/570 (6%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+ +++ + QLNP VGDI GN A+ +A A QG L L +E+ ++GYPP DL+ Sbjct: 1 MVLAMRLGLIQLNPTVGDIEGNAARIEQAVRRATAQGARLCLTSEMALTGYPPRDLLLFG 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKIN 116 SF++ + A++ L + ++VG + + + N+ V+L G + K Sbjct: 61 SFVRRVTEALEDLARRLANEAP-VLVGTVEANPGPCGKLLRNAAVLLGGGRVRHSFHKTL 119 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQ 166 LP Y F E R F +R+ + +CEDIW + + + L Q Sbjct: 120 LPTYDVFDESRYFEPSQEPKLFELDGLRMAVTVCEDIWNDKDYWPRRNYAFDPLEALASQ 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + + +L+ASP++ K +R ++ P+ YVNQVGG D+LIFDG S FD Q Sbjct: 180 APDVILNLSASPFHLGKQAERERMLAAISRKYKAPLAYVNQVGGNDDLIFDGRSTVFDSQ 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 ++ ++ F+E + S + L A V+ RDY Sbjct: 240 GRILARLAAFAEDVAVVNL-------------AASPVPLPADLSGPADALEALVMGTRDY 286 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +K F ++GLSGGIDSAL AA+A ALG +NV +++P Y+S S++D+ A+ L Sbjct: 287 ARKCGFKSALLGLSGGIDSALTAAVAARALGPDNVLGVLMPSPYSSRGSIDDSLELARNL 346 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G + LPI L+ F + + + + ENIQSRIRGN+LMALSN +MLLTT Sbjct: 347 GLRTLTLPIAPLMAAFEQTLEEPFRGLCPDVTEENIQSRIRGNLLMALSNKYCSMLLTTG 406 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE++VGY T+YGDMSGG + D KT V+ ++ N+ T +IP SIL Sbjct: 407 NKSELAVGYCTIYGDMSGGLAVISDAPKTLVYAMSRQLNADSP-------TPIIPESILT 459 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGS 525 K PSAELRP Q DQ+SLPPY +LD I+ +E +++ TV V L+ + Sbjct: 460 KPPSAELRPGQVDQDSLPPYDVLDAILALHIEEHRGLEEIVAAGFDEPTVHRVLKLVAIA 519 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 E+KRRQA G +IT ++FG PI+ ++ Sbjct: 520 EFKRRQAAPGLRITRRAFGTGWRMPIARRW 549 >gi|84514343|ref|ZP_01001707.1| NAD(+) synthase [Loktanella vestfoldensis SKA53] gi|84511394|gb|EAQ07847.1| NAD(+) synthase [Loktanella vestfoldensis SKA53] Length = 553 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 236/560 (42%), Positives = 345/560 (61%), Gaps = 10/560 (1%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + ++ +AQLNP +GD+AGN A A +A E G DL++ E+F++GY +DLV K Sbjct: 1 MTRIFRLTMAQLNPTLGDLAGNAALAAQAWAEGKAAGADLVVLPEMFLTGYQTQDLVRKP 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 +F+ +S +D L D G + +G P + + + N V L G I A K LPN+ Sbjct: 61 AFVADAASRLDALARACAD-GPVLGIGLPMVEDDNLYNCYVYLAGGKITARFRKHFLPNF 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDI-RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 + F E R F S + P+ R+G ICED W + ++C+ + + GA+ L N SPY Sbjct: 120 NVFDEVRLFNSAAISGPVTLAGGPRIGTPICEDAW-SPDVCETMVESGAQILVVPNGSPY 178 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + +K R + + ++ +P++Y+N +GGQD+ +FDG SF + +LA Q+ F Sbjct: 179 FRDKFPIRLQTMIARVVENDVPLVYLNMIGGQDDQMFDGGSFVLNRGGKLAVQLPVFDAA 238 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 H D Q + +++ D + E++ Y A V +LRDY++K F KV++GL Sbjct: 239 I----THVDFQETDQGWVTLDGPKALLPDDLEQD--YRAMVEALRDYLRKTGFGKVLLGL 292 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSA+ AAIAVDALG + V+ +MLP +YTS SL+DAAA A+ALGC+YD + I Sbjct: 293 SGGIDSAIVAAIAVDALGADQVRCVMLPSEYTSQASLDDAAAAARALGCRYDTVSIAGPR 352 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 ++ + P+ + ENIQSRIRG +LMA SN MLLTT NKSE++VGY T+Y Sbjct: 353 AAVTEALAPLFGDMPADLTEENIQSRIRGLLLMAQSNKFGEMLLTTGNKSEVAVGYATIY 412 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GG+NP+KD+YKT+VF + WRN+H GP +VIPP+I++K PSAELRP Q D Sbjct: 413 GDMAGGYNPIKDMYKTRVFDICRWRNAHHRDWMQGPAGQVIPPAIIDKPPSAELRPDQRD 472 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 +SLPPY +LD I+ +V+ + S + Y+ TV+ +EHL+Y SEYKR QA G ++ Sbjct: 473 DDSLPPYDVLDGILAMLVDGDASVADCVAAGYDRATVKKIEHLVYISEYKRFQAAPGVRL 532 Query: 539 TAKSFGRDRLYPISNKFRDH 558 + ++F DR YPI N++RD Sbjct: 533 SDRAFWLDRRYPIVNRWRDP 552 >gi|310287707|ref|YP_003938965.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium bifidum S17] gi|309251643|gb|ADO53391.1| Glutamine-dependent NAD(+) synthetase [Bifidobacterium bifidum S17] Length = 565 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 214/579 (36%), Positives = 316/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+ A+AQ++ VGD+ GN K A +G +++F E+ ++GYP EDL +++ Sbjct: 1 MTHLRFALAQIDTCVGDLDGNADKIMHYAHLAAHEGAHVVIFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKIN 116 F +A + L ++ G G + VG D + N +V+L G + A DK Sbjct: 61 FRKAAWDKANWLATELEADGLGDLYVAVGTVGTDHASDKPRNRMVVLHDGMVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + +R+G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFAAGDRTVVLDIDGVRIGVAICEDIWQDGGPVARLVDEHIDVLMTMNG 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R+++ + + V P+IYVNQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTHTRYDLAVRRAAEVGAPMIYVNQVGGQDDLVFDGGSFVVDRDGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E + + D + ++D + Y ACVL L+DY+ KN F V Sbjct: 241 MEHLGLFDLDTDAEHQTTGDIADLPDPDEEV--------YTACVLGLKDYMAKNRFSGVC 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G NV I +P Y+S S +DAA A +G YDV PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGHNVHGISMPSMYSSIGSKDDAADLAANIGAHYDVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + N + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PMFNVYQGQL------KLEGVAAENLQARIRGVIVMAYSNSLGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----------------NSHGITSGLGPLTEV 459 T+YGD GG+ P+KDL KT+V++L+ WR N +G P + Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWELSRWRNRAAAAGVGIGGLRIVGNENGDAGTPLPGGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++++TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYELLDKVLAAYIEHAHGRADLLADGFDEKTVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|258514323|ref|YP_003190545.1| NAD+ synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257778028|gb|ACV61922.1| NAD+ synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 558 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 216/567 (38%), Positives = 326/567 (57%), Gaps = 27/567 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP +GD+ GN AK ++ +A + G+DL++ EL ++GYPP+DL+++K F++ Sbjct: 1 MKIALAQINPTIGDLTGNSAKIKQYLNKALQAGVDLMICPELAVTGYPPKDLLYRKEFLR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ--EGVLNSVVILDAGNIIAVRDKINLPNYSE 122 + ++ G G+++G P + + + NS ++++ G II++ DK LPNY Sbjct: 61 EVNQVVER-DILPCTGDIGLILGVPVEGDGEDDLYNSAIVMENGKIISLHDKTLLPNYDV 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAEFLF 172 F EKR F G P+ FRD+ LG+ ICEDIW + + + L +G E + Sbjct: 120 FDEKRYFKPGLIRMPLHFRDLVLGVTICEDIWNDKDYWPRQKYAVDPVQELADRGIEIII 179 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 ++ ASPY++ K R +I+ L IIYVNQVGG DELIFDG S + Q+ + Sbjct: 180 NIAASPYHYGKQNLRMQIMQQLAKKYRLHIIYVNQVGGNDELIFDGCSMVVNKHGQVVRK 239 Query: 233 MKHFSEQNFMTEWH--YDQQLSQWNYMSDDSASTMYIPLQEEEADYN-ACVLSLRDYVQK 289 K F+E + E +++ + + ++ +E A + A VL +RDY+ K Sbjct: 240 AKSFAEDFLVFEIDDLREKESVSEKFFPAAGQTQLHEAGEENIASVHDALVLGIRDYIGK 299 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F+K +IGLSGGIDSA+ AA+AV ALGKENV + +P +Y+S S DA A LG Sbjct: 300 IGFNKALIGLSGGIDSAVTAALAVAALGKENVLGVAMPSRYSSAGSKSDAEKLAANLGID 359 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + ++P+ + + F ++ +Q + ENIQ+RIRG+ILM LSN +LTT NKS Sbjct: 360 FRIIPVESIFDVFLTVFNQGANPLM-DLAEENIQARIRGSILMFLSNREDYFVLTTGNKS 418 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E +VGY TLYGDM G + D+ K V++LA + N EVIP + + K+P Sbjct: 419 ETAVGYCTLYGDMCGSLAVIGDVPKVMVYELARYINRQ---------NEVIPETTIIKAP 469 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETVRYVEHLLYGSEYK 528 SAELRP Q DQ+SLPPY ILD+II+ VE +S Y + + + +EYK Sbjct: 470 SAELRPDQLDQDSLPPYDILDEIIRLYVEEGKSSEEIAVLGYEPLLINNIIRKINAAEYK 529 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R+QA ++T+K+FG R PI ++ Sbjct: 530 RQQAAPTLRVTSKAFGSGRRMPIVQRW 556 >gi|291456551|ref|ZP_06595941.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium breve DSM 20213] gi|291381828|gb|EFE89346.1| glutamine-dependent NAD(+) synthetase [Bifidobacterium breve DSM 20213] Length = 565 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 217/579 (37%), Positives = 316/579 (54%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A + +F E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDANAAKVLDYSRKAAAGDAQVAVFPEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F QA + L D G G +VVG D+E N +V+L G + DK Sbjct: 61 FRQAAWDKANELAGQLQDEGLGHLFVVVGTVGTDRETSKPRNRLVVLHEGVVWTGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGNRSVTLEVNGTTIGVAICEDIWQDGGPVAELATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPLIYLNQVGGQDDLVFDGGSFVVDADGTLLERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W +D + ST+ L +E Y ACVL L+DY+ KN+F+ V Sbjct: 241 MED--LTFWDFDAAADHQ------TKSTIVAELDPDEEVYTACVLGLKDYMAKNHFNGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLAANIGAHYEVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFVAYQQQL------DLDGVAAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV----------------- 459 T+YGD GG+ P+KDL KT+V++++ WRN ++ Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEEGNAGIPLKNGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + +++ TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDEATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR PI+N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPITNAFRE 565 >gi|118595150|ref|ZP_01552497.1| NAD synthetase [Methylophilales bacterium HTCC2181] gi|118440928|gb|EAV47555.1| NAD synthetase [Methylophilales bacterium HTCC2181] Length = 532 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 215/556 (38%), Positives = 320/556 (57%), Gaps = 26/556 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ +AQLN +VGD+ N + E+A G D++L EL ISGYPPEDL+ FI Sbjct: 1 MKVHLAQLNTIVGDLNFNKNLILKEAEKAMLNGADILLTPELSISGYPPEDLLLDHEFIN 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C +D + IV+G P + + NS+ L ++ K LPNY F Sbjct: 61 ECDKCVDEIA--IKFPDILIVIGHPMLEDNKLYNSLSALYKSKVLCTYHKRVLPNYGVFD 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G N I + ++ LICED+W + + L KQG + + +NASP+ K Sbjct: 119 EKRYFSEGKDNATINYNGKKISFLICEDVWT-EGLVESLVKQGVDIILCINASPFEVKKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +KR + +T +I+ + ++Y+N +GGQD ++FDG SF +DG + L F++ FS + + + Sbjct: 178 QKRIDQITNKIAGNEVALVYLNALGGQDNVVFDGGSFVYDGMKGLIFELPQFSLTSEIID 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + +L Y + E N VL+L DY++KNN +V +GLSGGID Sbjct: 238 LNVGTKLLPKIY-------------NDLEIILNGLVLALHDYLEKNNIERVFLGLSGGID 284 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL IA A+ K+N+ +M+P KYT+ SLEDA + + LG Y I L+N+ Sbjct: 285 SALVLFIATKAMAKKNIHAVMMPSKYTANISLEDAQSLTENLGVNYQTYSIETLINNIDQ 344 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + S+ + P+ I EN Q+RIRG +LM L+N M+L TSNKSE++VGY T+YGDM G Sbjct: 345 VFSEEFKNLPADITEENFQARIRGLLLMGLANKHHGMVLATSNKSELAVGYSTIYGDMVG 404 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 GF LKD+ KT V+ LA N +IP I+ + PSAEL+ +QTDQ++LP Sbjct: 405 GFCVLKDVPKTMVYDLARHINREEN---------IIPSRIITREPSAELKNNQTDQDTLP 455 Query: 485 PYPILDDIIKRIVENEES-FINNDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y ILDD+I+ VE +++ + ++ + V V +L+ GSE+KRRQ+ G KIT+K+F Sbjct: 456 SYEILDDVIRLYVEEKQTPAFMIESGFDSQIVEKVVNLINGSEFKRRQSAPGPKITSKAF 515 Query: 544 GRDRLYPISNKFRDHI 559 DR +PI+NK++ + Sbjct: 516 SVDRRFPITNKYKPKL 531 >gi|330831161|ref|YP_004394113.1| glutamine-dependent NAD(+) synthetase [Aeromonas veronii B565] gi|328806297|gb|AEB51496.1| Glutamine-dependent NAD(+) synthetase (NAD(+) synthase) [Aeromonas veronii B565] Length = 540 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 223/556 (40%), Positives = 329/556 (59%), Gaps = 22/556 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M K L + +AQLN VG I N K A +A +QG DL++ +EL ++GYPPEDL+ + Sbjct: 1 MAKALSLMLAQLNLTVGAIEDNTDKVLAAAAQAEQQGADLLVCSELALTGYPPEDLLLRA 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + +A+ + + G I+VG P ++ E + N+ + + G +I K +LPNY Sbjct: 61 DLMIRVEAALSRIAAW--QGACAILVGHPWREGEALYNAASLYEQGQLITRYFKQDLPNY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F + + FR +LG+LICED+W+ ++NASPY Sbjct: 119 GVFDEKRYFTAATETCVVPFRGYQLGLLICEDLWQPGPALAAKAAGAELL-LTINASPYD 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R E++ + LP++Y+NQV GQDELIFDG S F Q +L ++ F+E+ Sbjct: 178 QEKPWIRRELMAERCDQTGLPLVYLNQVCGQDELIFDGCSKVFSSQGELTHKLAPFAEEL 237 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + + Q + + PL+ Y A VL++RDYV KN FH ++GLS Sbjct: 238 ALVRFADGQPVKE---------REPAAPLEPLAETYQALVLAVRDYVTKNGFHGAVLGLS 288 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AIA DA+G + VQ +M+P++YT+ S+EDA A+ +G +++++ I + Sbjct: 289 GGIDSALTLAIAADAIGADKVQAVMMPFRYTAQMSVEDAKEQAERMGVEFNIISIEPMFE 348 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R RG +LMALSN + ++LTT NKSE++VGY TLYG Sbjct: 349 GFMTQLAPLFEGTARDTTEENLQARCRGVLLMALSNKRRRIVLTTGNKSEMAVGYATLYG 408 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF+ LKD+ KT VF+L +RNS + VIP ++++ PSAEL P Q DQ Sbjct: 409 DMAGGFDVLKDVPKTLVFKLCEYRNS---------VDYVIPQRVIDRPPSAELAPDQVDQ 459 Query: 481 ESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 +SLPPY ILD I+KR VE + S + + + + VR V L+ +EYKRRQA VG +IT Sbjct: 460 DSLPPYDILDAILKRYVEEDASVADMVAEGFEEAVVRKVIRLVDLNEYKRRQAAVGPRIT 519 Query: 540 AKSFGRDRLYPISNKF 555 A++FG+DR YPI++ F Sbjct: 520 ARNFGKDRRYPITSGF 535 >gi|332665535|ref|YP_004448323.1| NAD+ synthetase [Haliscomenobacter hydrossis DSM 1100] gi|332334349|gb|AEE51450.1| NAD+ synthetase [Haliscomenobacter hydrossis DSM 1100] Length = 545 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 199/564 (35%), Positives = 295/564 (52%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IAIAQ N +G+ GN+ K + E+A +QG D+I F EL GYP D + FI Sbjct: 1 MRIAIAQFNAHIGNFEGNLTKMLQMTEDAKQQGADIICFPELATCGYPARDFLEFDDFIH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ----DQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++I TL G IVVG P + + + + NSV L G + V+ K LP Y Sbjct: 61 QADASIHTLAKAAQ--GIAIVVGSPTRNPQIEGKDLYNSVYFLAYGRVEFVQHKALLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN--------ICKHLKKQGAEFLF 172 F E R F + + R+ + +CEDIW N + E + Sbjct: 119 DVFDEYRYFQPASEFKIVEYMGKRIALTVCEDIWNVGNENPLYTICPMDEMMPYQPELMI 178 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +++ASP+ H+ +R +V + ++PI YVN VGGQ EL+FDG S + + Sbjct: 179 NVSASPFSHDHAPERIHVVRANVERYNVPIFYVNHVGGQTELLFDGGSVVMSPNGNVHDE 238 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 M F E + E + + + + M+ +A ++ +RDY K Sbjct: 239 MPFFEECIRVYELDEVMAGQKQVEQTRNKIALMH----------DALLMGIRDYFGKLGL 288 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 K I+GLSGGIDSA+ +A ALG +NV+ +++P +Y+S S+ DA A+ LG +YD+ Sbjct: 289 KKAILGLSGGIDSAVTVVLAARALGADNVRVLLMPSQYSSDHSVNDARKLAENLGVQYDL 348 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 L + + + + P I EN+Q+RIRG +LMA SN +LL TSNKSE++ Sbjct: 349 LAVEPMYQAYMETLKPHFWGFPFNITEENLQARIRGMLLMAFSNKFGHILLNTSNKSEMA 408 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGYGTLYGDM GG + L D+YKT+V++LA + N G EVIP + + K PSAE Sbjct: 409 VGYGTLYGDMCGGLSVLGDVYKTEVYELAHYINKDG---------EVIPENSITKPPSAE 459 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP Q D +SLP Y ILD ++ +E + + ++D VR V L+ +E+KR Q Sbjct: 460 LRPDQKDSDSLPDYDILDAVLYNYIERHQGPKELIEMGFDDALVRRVLRLVNINEFKRHQ 519 Query: 532 APVGTKITAKSFGRDRLYPISNKF 555 +++AK+FG R PI K+ Sbjct: 520 TAPVLRVSAKAFGMGRRMPIVGKY 543 >gi|158313601|ref|YP_001506109.1| NAD+ synthetase [Frankia sp. EAN1pec] gi|158109006|gb|ABW11203.1| NAD+ synthetase [Frankia sp. EAN1pec] Length = 601 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 206/601 (34%), Positives = 307/601 (51%), Gaps = 49/601 (8%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ++ VGD+ GN ++A + L++F E+ ++GYP EDLV ++S Sbjct: 1 MAQLRIALAQVDTTVGDLDGNAELVSSWTKQALARSAHLVVFGEMTLTGYPAEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGG---AGIVVGF----------PRQDQEGVLNSVVILDAGNI 108 F+ A ++A++ L + G +VVG+ + N V +L G + Sbjct: 61 FVAASAAALERLAVRLAEEGAGEIAVVVGYLDASPTPAPAVGRPAGEPQNCVAVLWQGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 A K +LPNY F E R F+ G + + +G+ +CED+W+ ++ G Sbjct: 121 AARSAKHHLPNYGVFDEFRYFVPGTTFPVFRLHGVDVGLTVCEDLWQEGGPVAVAREVGV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +N SPY K R E+ + + YVN VGGQDEL+FDG S D + Sbjct: 181 GLLLCINGSPYEQGKSYHRDELCARRAREAGATLAYVNLVGGQDELVFDGDSLVVDADGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY------------------------DQQLSQWNYMSDDSAST 264 + + F+E + +S+ +D + Sbjct: 241 VLARAPVFAETLLTVDLDLPEGAGTGVGPETGPDGPVDAGDGTTMAVSRVVLAADPLPAW 300 Query: 265 MYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK 318 P Y A V RDYV+KN F V +GLSGGIDSAL A IAVDALG Sbjct: 301 EPRPATVADRPDPAGELYAAVVTGTRDYVRKNGFRSVALGLSGGIDSALVATIAVDALGP 360 Query: 319 ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIV 378 + V T+ +P ++S SL+DAA A ++ V+PI V F + ++ Sbjct: 361 DAVHTVAMPSAHSSQGSLDDAAELAHRQRTRHSVVPIEPTVAAFHAALAAAGGLHGL--A 418 Query: 379 AENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVF 438 AEN+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GGF P+KD+ KT V+ Sbjct: 419 AENLQARVRGTLLMALSNEHGHLVLTTGNKSELATGFSTLYGDSAGGFAPIKDVSKTNVW 478 Query: 439 QLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVE 498 LA WRN+ + G P IP I+ K PSAEL P Q D + LP Y +LD ++ V Sbjct: 479 VLARWRNARAVARGEVP---PIPEEIIVKPPSAELAPGQLDSDRLPDYSVLDAVLDDYVS 535 Query: 499 NEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ ++ TV V L+ +EYKRRQ P G K+T+K+FGRDR PI++++R+ Sbjct: 536 HDLGRAELTAAGHDPATVDRVIRLVDLAEYKRRQNPPGPKVTSKAFGRDRRLPITSRWRE 595 Query: 558 H 558 Sbjct: 596 R 596 >gi|312891312|ref|ZP_07750831.1| NH(3)-dependent NAD(+) synthetase [Mucilaginibacter paludis DSM 18603] gi|311296272|gb|EFQ73422.1| NH(3)-dependent NAD(+) synthetase [Mucilaginibacter paludis DSM 18603] Length = 554 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 206/567 (36%), Positives = 305/567 (53%), Gaps = 27/567 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M+ + IA+AQLN VG+ N K E A RQG DL++F+EL + GYP D Sbjct: 1 MM--INIALAQLNYHVGNFESNTKKIIGTIETARRQGADLVVFSELCVCGYPARDFFEFT 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKIN 116 FI C A + + D ++G P + + + NS ++ G + AV +K Sbjct: 59 EFIGLCEEAAQQIAAVCTD--IACIIGLPTPNLKEQGKDLFNSAYFIENGKVKAVVNKAL 116 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-------ICKHLKKQGAE 169 LPNY F E R F + I F+ R+ + ICED+W L +Q + Sbjct: 117 LPNYDVFDEYRYFEPETDFNCIDFKGHRIALTICEDLWNTIENPLYITRPMDKLIEQQPD 176 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + ++ ASP+ +N K+R +I++ HLP+ YVNQVG Q ELIFDG S FD + + Sbjct: 177 VMINIAASPFAYNHDKERIDILSNNSKQYHLPLFYVNQVGAQTELIFDGGSLVFDDKGDM 236 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 ++ +F E + + D+ + + + + + E + +L +RDY K Sbjct: 237 LDELPYFKEH--IAYYQLDKAGDKAVISFNHTPTVKPEYTGDIEQIHQGLLLGIRDYFYK 294 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 + F + I+GLSGGIDSA+ A+A +ALG +NV ++LP +++S S+ DA LGCK Sbjct: 295 SGFTRAILGLSGGIDSAVVCALAAEALGPDNVMAVLLPSRFSSDHSVTDADDLVTNLGCK 354 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + + I ++ F + + Q P I ENIQSR R +LMA+ N +LL TSNKS Sbjct: 355 SETIAIKNITEAFETALHPQFQNLPFNIAEENIQSRSRAVLLMAMCNKFGYILLNTSNKS 414 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E +VGYGTLYGDM GG + L D+YKTQV+QLA++ N E+IP + + K P Sbjct: 415 EAAVGYGTLYGDMCGGISVLGDVYKTQVYQLANYINRE---------REIIPINSIVKPP 465 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYK 528 SAELRP Q D +SLP Y ILD I+ +EN +S Y+++ VR + L+ +E+K Sbjct: 466 SAELRPGQKDSDSLPDYDILDTILLEYIENRKSSKEIISMGYDEQVVRRIIKLVNTAEHK 525 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R Q P +++ K+FG R PI K+ Sbjct: 526 RYQTPPILRVSPKAFGMGRRMPIVGKY 552 >gi|264677785|ref|YP_003277691.1| NAD+ synthetase [Comamonas testosteroni CNB-2] gi|262208297|gb|ACY32395.1| NAD+ synthetase [Comamonas testosteroni CNB-2] Length = 535 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 214/544 (39%), Positives = 317/544 (58%), Gaps = 15/544 (2%) Query: 17 GDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 GD++GN+ K A EA G L+L EL + GY EDL + +F++AC +A+ L+ Sbjct: 2 GDLSGNVQKIIAAAAEAYANGARLLLTPELALCGYAAEDLYLRPAFLEACDAALQQLQQA 61 Query: 77 THDG-GAGIVVGFPRQDQEG--VLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY 133 + G +V+G P++D++G + N+ +L G IA K LPN+ F E+R F +G Sbjct: 62 SAQWPGLALVIGHPQRDEQGEKLFNAASVLRDGQQIARYFKQLLPNFGVFDEQRYFAAGE 121 Query: 134 SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTG 193 + I++G+LICED W ++ + GA+ L +NASP++ K +R ++ Sbjct: 122 KSCVFELDGIQIGLLICEDAW-HAGPARAAVAAGAQLLAVINASPFHSGKPLEREAVIAQ 180 Query: 194 QISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQ 253 + +P++Y + VGGQDE++FDG SF D Q++ + F E+ M Sbjct: 181 RAMENAVPLVYAHLVGGQDEVVFDGCSFAVDASGQVSARAAAFEEELPMVAAQLVDGCVT 240 Query: 254 WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 + L A ++A VLS+RDYV KN F +IGLSGG+DSAL AIAV Sbjct: 241 L-------MGQVKPQLNHHHALWSALVLSVRDYVGKNRFPGALIGLSGGMDSALVLAIAV 293 Query: 314 DALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEE 373 DALG + V+T+M+P YT+ S DA ++ +G +++ + I F + ++ Sbjct: 294 DALGADKVRTVMMPSPYTADISWLDAREMSERVGVQHEEIDIAPQFEAFKAALAGTFAGR 353 Query: 374 PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLY 433 EN+Q+RIRG +LMA+SN +++LTT NKSE+S GY TLYGDM+GGF +KD++ Sbjct: 354 AEDTTEENLQARIRGTLLMAMSNKFGSIVLTTGNKSEMSTGYCTLYGDMAGGFAVIKDVF 413 Query: 434 KTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDII 493 KT+VF LA WRN++ G + IP I+ + PSAELRP Q DQ+SLP Y +LD I+ Sbjct: 414 KTEVFALARWRNANDP---FGTGLDPIPERIITRPPSAELRPDQKDQDSLPDYEVLDAIV 470 Query: 494 KRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 R +EN ES + + + V V L+ +EYKRRQAPVG ++T +SFG+D YPI+ Sbjct: 471 SRYMENNESISSIVAEGFAPADVERVTRLIQINEYKRRQAPVGPRLTMRSFGKDWRYPIT 530 Query: 553 NKFR 556 NKFR Sbjct: 531 NKFR 534 >gi|78067208|ref|YP_369977.1| NAD synthetase [Burkholderia sp. 383] gi|77967953|gb|ABB09333.1| DNA-directed RNA polymerase, subunit H [Burkholderia sp. 383] Length = 568 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 221/583 (37%), Positives = 325/583 (55%), Gaps = 41/583 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K ++A+AQ+N VGD AGN+A+ A A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHD-GGAGIVVGFPRQDQE-----------------------GVL 97 F A +SA+D L G ++VG P + Sbjct: 60 FYAAAASALDALADALKAFDGLAVLVGHPLRGAGEGAHAPAVDGNANRPIERGVPPTDTY 119 Query: 98 NSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS 157 N+V ++ G I+ K +LPN F EKR F + ++ G++ICED W ++ Sbjct: 120 NAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDAEPLVFELNGVKYGVIICEDAW-HA 178 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + K GA+ L N SPY+ NK R +I+ +I LP++Y+N VGGQDEL+FD Sbjct: 179 SAAQIAKAAGAQVLLIPNGSPYHMNKEAVRFDILRARIRETGLPMVYINLVGGQDELVFD 238 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYN 277 G SF D Q L +M F E + + E+ + + L + Y Sbjct: 239 GGSFVLDAQGALVVKMPQFDEGHAIVEFD----------GARPLPGAIAPELSTDAQVYR 288 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A V +RDY+ KN F +IGLSGG+DSAL A+A DALG E V+ +M+P ++T+ S Sbjct: 289 ALVTGVRDYIGKNGFPGALIGLSGGVDSALVLAVACDALGPERVRAVMMPSRFTADISTT 348 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 DAA A+ +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 DAAEMARRVGVRYDEIAIAPMFDAFRASLASEFAGRAEDATEENIQARIRGTLLMALSNK 408 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN PL Sbjct: 409 FGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNETTAY----PLR 464 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVR 516 +VIP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y V Sbjct: 465 DVIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQTDVE 524 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 V L+ +EYKRRQAP+G ++T ++FGRD YPI+++F + + Sbjct: 525 RVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERL 567 >gi|167835859|ref|ZP_02462742.1| NAD synthetase [Burkholderia thailandensis MSMB43] Length = 569 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 228/584 (39%), Positives = 330/584 (56%), Gaps = 42/584 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +IA+AQLN VGD AGN AK A + A+ G L++ EL +SGYPPEDL+ + + Sbjct: 1 MKT-RIALAQLNVTVGDFAGNAAKIVAAAQAAHDAGAQLLIAPELALSGYPPEDLLLRPA 59 Query: 62 FIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG------------------------V 96 F A +A+ L + G ++VG P + + Sbjct: 60 FYAASDAALAELAAQLKPLAGLAVLVGHPLRAGDAGAPGAPSADGNANRPIERGAAPADT 119 Query: 97 LNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN 156 N+ ++ G + K +LPN F EKR F + + + G++ICED+W + Sbjct: 120 YNAASLIVGGEVAGTYRKQDLPNTEVFDEKRYFATDAAPYVFELNGVTFGVVICEDVW-H 178 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIF 216 ++ + K GA+ L N SPY+ NK R +I+ +I LP++YVN VGGQDEL+F Sbjct: 179 ASAAQLAKAAGAQVLIVPNGSPYHMNKDTVRIDILRARIRETGLPMVYVNLVGGQDELVF 238 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADY 276 DG SF DG +L +M F E N + E+ + + + L E Y Sbjct: 239 DGGSFVLDGAGELVAKMPQFEEGNAIVEFD----------GAHPLPAAIAPALSVEAQVY 288 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSL 336 A VL +RDY+ KN F IIGLSGG+DSAL A+AVDALG E V+ +M+P +YT+ S Sbjct: 289 RALVLGVRDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTADIST 348 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 DAA A +G +YD + I + + F + ++ ENIQ+RIRG +LMALSN Sbjct: 349 TDAADMAARVGVRYDEIAIAPMFDAFRASLAGEFAGRAEDATEENIQARIRGTLLMALSN 408 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 +++LTT NKSE++VGY TLYGDM+GGF +KD+ KT V++L +RN+ LG Sbjct: 409 KFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEYGALG-- 466 Query: 457 TEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETV 515 +IP IL ++PSAELR +QTDQ+SLPPY +LD I++ +E + Y++ V Sbjct: 467 --IIPERILTRAPSAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLSEIVAAGYSEADV 524 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 + V L+ +EYKRRQAPVG ++T ++FGRD YPI+++F + I Sbjct: 525 KRVTRLIKINEYKRRQAPVGIRVTHRAFGRDWRYPITSRFTESI 568 >gi|288920335|ref|ZP_06414647.1| NAD+ synthetase [Frankia sp. EUN1f] gi|288348283|gb|EFC82548.1| NAD+ synthetase [Frankia sp. EUN1f] Length = 597 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 205/602 (34%), Positives = 302/602 (50%), Gaps = 47/602 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ++ VGD+ N ++A QG L+ F E+ ++GYP EDLV ++S Sbjct: 1 MAQLRIALAQVDTTVGDLDANADLVSSWTKQALTQGAHLVAFGEMTLTGYPAEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGG---AGIVVGF----------PRQDQEGVLNSVVILDAGNI 108 F+ A ++ ++ L + + G +VVG+ + N V +L G + Sbjct: 61 FVAASAATLERLAARLDEEGTGSVAVVVGYLDASPTPAPAVGRPAGEPQNCVAVLWQGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 A K +LPNY F E R F+ G + + +G+ +CED+W+ +K G Sbjct: 121 AARSAKHHLPNYGVFDEFRYFVPGTTFPVFRLHGVDVGLTVCEDLWQAGGPVAVARKVGV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +N SPY K R E+ + + Y+N VGGQDEL+FDG S D Sbjct: 181 GLLLCINGSPYEQGKSFHRDELCARRAREADATLAYINLVGGQDELVFDGDSLVVDPTGA 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYM----------------------------SDD 260 + + F E + + + + Sbjct: 241 VLARAPVFEETLLTVDLDLPARNTPGTATGMTGQVAAGDGTMMEVSHIVLAGEPLPAWEP 300 Query: 261 SASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN 320 + Y A V RDYV+KN F V +GLSGGIDSAL A IAVDALG E Sbjct: 301 RPHQIAQRPDPVGELYAAVVTGTRDYVRKNGFRSVALGLSGGIDSALVATIAVDALGGEA 360 Query: 321 VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAE 380 V T+ +P ++S SL+DAA A+ G ++ V+PI V F + ++ AE Sbjct: 361 VHTVAMPSAHSSQGSLDDAAELARRQGTQHSVVPIEPTVAAFHAALAAAGGLHGL--AAE 418 Query: 381 NIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQL 440 N+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GGF P+KD+ KT V+ L Sbjct: 419 NLQARVRGTLLMALSNEHGHLVLTTGNKSELATGFSTLYGDSAGGFAPIKDVSKTMVWAL 478 Query: 441 ASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE 500 + WRN+ G P IP I+ K PSAEL P Q D + LP Y LD ++ V ++ Sbjct: 479 SRWRNAQATARGEVP---PIPEEIIVKPPSAELAPGQLDSDRLPDYTELDAVLDDYVSHD 535 Query: 501 ESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHI 559 ++ TV V L+ +EYKRRQ P G K+T+K+FGRDR PI++++R+ Sbjct: 536 LGRAELTAAGHDPATVDRVIRLVDLAEYKRRQNPPGPKVTSKAFGRDRRLPITSRWRERE 595 Query: 560 SE 561 E Sbjct: 596 RE 597 >gi|78357134|ref|YP_388583.1| NH(3)-dependent NAD(+) synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219539|gb|ABB38888.1| NH(3)-dependent NAD(+) synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 550 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 208/567 (36%), Positives = 304/567 (53%), Gaps = 35/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ QLNPVVGD+A N + A A+ G L + +EL + GYPP DL+ FI Sbjct: 1 MRIALLQLNPVVGDLAANASAIAGAVRSASAGGARLCVTSELALCGYPPRDLLLMDEFIS 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ----DQEGVLNSVVILDAGNIIAVRDKINLPNY 120 AC +D L + D ++VG P + V N+ V+L G K+ LP Y Sbjct: 61 ACRGHLDRLAQELADCCP-VLVGAPVAAAGDYPDTVRNAAVLLRDGVAEVAGSKVLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK-----------NSNICKHLKKQGAE 169 F E+R F G+ + R+G+ ICEDIW + L +G + Sbjct: 120 DVFDERRYFTPGHRCGLVTVDGYRVGVSICEDIWNDKEYWGEHRRYPHDPVAELASEGVD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L +L+ASP+ K +R ++ + + +P++YVNQVGG D+LIF G S L Sbjct: 180 LLVNLSASPFSLGKQAQRESMLGAVAARIGVPVVYVNQVGGNDDLIFAGKSMVMGADGTL 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + F + + + + + A + A VL RDY K Sbjct: 240 LARAAGFVPEVLLADACAASAGAVAPDAPEPEAQI-----------WQALVLGTRDYAAK 288 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F ++GLSGGIDSAL A IA +ALG ENV +M+P Y+S S++D+ A + LG + Sbjct: 289 CGFKGAVLGLSGGIDSALVACIAAEALGPENVLGVMMPSPYSSRGSVDDSVALVQNLGIR 348 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 V+PI L+ F + +S+ + + ENIQSRIRGNILMA+SN +LLTT NKS Sbjct: 349 SRVVPIEPLMRSFDAALSESFAGLDADVTEENIQSRIRGNILMAMSNKFGKVLLTTGNKS 408 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E++VGY T+YGDM+GG + DL KT V+ + W NS EVIP ++LEK+P Sbjct: 409 ELAVGYCTIYGDMAGGLGVIADLPKTMVYAVCRWLNSVRGF-------EVIPRAVLEKAP 461 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYK 528 SAELRP Q D +SLP Y +LDD+++R + ++ ++ ETVR + L+ +E+K Sbjct: 462 SAELRPDQKDVDSLPDYAVLDDVLERHIVRKQGMAAIVAAGHHPETVRRIIGLVRRAEFK 521 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 RRQAP G K+T ++FG P++ ++ Sbjct: 522 RRQAPPGLKVTDRAFGSGWRMPVAARY 548 >gi|54293718|ref|YP_126133.1| hypothetical protein lpl0771 [Legionella pneumophila str. Lens] gi|53753550|emb|CAH15005.1| hypothetical protein lpl0771 [Legionella pneumophila str. Lens] Length = 536 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 212/557 (38%), Positives = 292/557 (52%), Gaps = 27/557 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L + +AQ+NP VG I N K + ++ D+I+F EL +SGYP EDL+F+K Sbjct: 1 MNAPLTVLMAQINPTVGAIDANTNKILDVIKN-HQANHDVIIFPELTLSGYPAEDLLFRK 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + ++ T D ++VG P N I G I K LPNY Sbjct: 60 EYHDKIMLNLQDIQDTTKD--CYVIVGHPMIHIGDCYNGFSIFYQGEKIRAYHKQKLPNY 117 Query: 121 SEFHEKRTFISGY-SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E R F G + ++ +LG ICED+W+ L L SLNASP+ Sbjct: 118 GVFDEARYFTPGKKDPCVLSIKNHKLGFCICEDLWQ-KGPVDDLLDSDISILLSLNASPF 176 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + K + R E++ + IIYVNQ+GGQD+L+FDG S D Q + F E Sbjct: 177 DYRKYQLREELLRSYAKR-GVSIIYVNQIGGQDDLLFDGQSLAMDNQGIIRALAPAFEES 235 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ D A Y A V RDYV+KNNF V++GL Sbjct: 236 LCTVNIDGNKIDGSITPYLDKEA-----------LIYKALVCGTRDYVRKNNFPGVLLGL 284 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDSAL IAVDALG E V +++P +YT+ S EDA L + ++PI + Sbjct: 285 SGGIDSALTLTIAVDALGAEQVHAVLMPSQYTASISNEDALEQLSNLKVAHSIIPIEPMF 344 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 + ++ P ENIQ+RIRG +LMALSN + M+LTTSNKSE +VGY TLY Sbjct: 345 QSMIESLHPVFKDLPPDTTEENIQARIRGMLLMALSNKTGKMVLTTSNKSETAVGYTTLY 404 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GDM+GGF LKD+ KTQV++L +RN ++ VIP ++ + PSAEL+P+QTD Sbjct: 405 GDMAGGFAVLKDVLKTQVYELVRYRNK---------ISLVIPERVITRPPSAELKPNQTD 455 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 Q+SLP Y LD II +E S + + + V + L+ +EYKRRQA G KI Sbjct: 456 QDSLPEYGELDAIIMAYMEQNLSPSEIIAKGFKPQVVNKIIQLIKRNEYKRRQAAPGIKI 515 Query: 539 TAKSFGRDRLYPISNKF 555 + +FG+D +PI+N F Sbjct: 516 SNLAFGKDWRFPITNGF 532 >gi|213692585|ref|YP_002323171.1| NAD+ synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524046|gb|ACJ52793.1| NAD+ synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458737|dbj|BAJ69358.1| NAD+ synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 565 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 215/579 (37%), Positives = 319/579 (55%), Gaps = 37/579 (6%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+ A+AQ++ VG + N AK +A +++F+E+ ++GYP EDL +++ Sbjct: 1 MTQLRFALAQIDTCVGALDVNAAKVLDYSRKAAAGNAQVVVFSEMTLTGYPIEDLALRRT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE--GVLNSVVILDAGNIIAVRDKIN 116 F QA + L + +D G G +VVG D++ N +V+L G + A DK Sbjct: 61 FRQAAWDKANELATQLNDDGLGDLFVVVGTVGTDRKTSKPRNRLVVLHQGVVWAGYDKHF 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNA 176 LPNY F E R F +G + + +G+ ICEDIW++ L + + L ++N Sbjct: 121 LPNYGVFDEFRIFSAGDRSVTLDVDGATIGVAICEDIWQDGGPVADLATKNIDLLLTING 180 Query: 177 SPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHF 236 SPY K R E+ + + V+ P+IY+NQVGGQD+L+FDG SF D L + F Sbjct: 181 SPYEEGKTNTRFELAQRRAAEVNAPVIYLNQVGGQDDLVFDGGSFVVDADGTLIERSPMF 240 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVI 296 E +T W +D + + + L +E Y ACVL L+DY+ KN+F V Sbjct: 241 MEN--LTFWDFDSAAEHQ------AKAEIVPELDPDEEVYTACVLGLKDYMAKNHFTGVT 292 Query: 297 IGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 +GLSGGIDSAL AA+A DA G ENV I +P Y+S S +DAA A +G Y+V PI Sbjct: 293 LGLSGGIDSALVAAMAADACGGENVWGISMPSMYSSDGSKDDAADLASNIGAHYEVQPIE 352 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 L N + + + G+ AEN+Q+RIRG I+MA SN + + T NKSE++ GY Sbjct: 353 PLFNAYQQQL------DLHGVSAENLQARIRGVIVMASSNSRGLLAVATGNKSELACGYS 406 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV----------------- 459 T+YGD GG+ P+KDL KT+V++++ WRN ++ Sbjct: 407 TIYGDAVGGYAPIKDLLKTRVWEISRWRNKAAAAGVGIGGLKIVGNEDGNTGVPLKDGVM 466 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYV 518 IP S +EK+PSAELRP Q D +SLP Y +LD ++ +E+ + ++ TV V Sbjct: 467 IPVSSIEKAPSAELRPGQKDSDSLPEYALLDKVLAAYIEHAHGRADLLADGFDQATVDTV 526 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 L+ +E+KRRQ P+G K+TA +FGRDR P++N FR+ Sbjct: 527 MRLVDRAEWKRRQYPLGPKVTALAFGRDRRLPVTNAFRE 565 >gi|160872210|ref|ZP_02062342.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Rickettsiella grylli] gi|159121009|gb|EDP46347.1| glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]) [Rickettsiella grylli] Length = 543 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 213/562 (37%), Positives = 321/562 (57%), Gaps = 21/562 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + IA+AQ N +VGDI GN ++A +DL++F EL ++GYPPEDL+ ++ Sbjct: 1 MSLFHIAVAQSNFLVGDIQGNTQIILDNIQKAKHASVDLLIFPELALTGYPPEDLLLRED 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 F Q A+ ++ + G +++G+P +G N+V L+ I+ K LPNY Sbjct: 61 FKQQIQQALKIIQEKS--IGVTLLLGYPDFSSQGTFNAVSQLENKKIVNTYHKQYLPNYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYH 181 F E R F SG + + + +GILICED+W +S K+ GA+ L +NASP+ + Sbjct: 119 VFDECRYFKSGTQHGLFNIKGLPVGILICEDLW-HSQPALTHKENGAKLLVVINASPFDY 177 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K +R +I T + HLP++YV VGGQD L+FDG SF + + + F E + Sbjct: 178 TKAHQRLKIATARTKETHLPVLYVQGVGGQDNLVFDGGSFALNAKGHCVAETDFFKEDLW 237 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + + + P+ E YNA L++ DYV KN+F V+IGLSG Sbjct: 238 LVDLTI-----HSSVHFVPQKRLTKPPIDEA--IYNALTLAVADYVNKNHFPGVLIGLSG 290 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL AIAVDALG + V + LP +YTS S E L + L I + Sbjct: 291 GIDSALVLAIAVDALGSDRVHAVFLPSRYTSQLSQEIVKELGSNLQVSIETLSIEPSFSA 350 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + ++ + P GI+AENIQ+R R +LMALSNH +LL +NKSE++VGYGTLYGD Sbjct: 351 FLTTLNLDPKHPPKGIIAENIQARCRAVLLMALSNHHGNLLLNCTNKSELAVGYGTLYGD 410 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 M+GGF+ LKD+ KT+V+QLA +RN + P S++ ++PSAEL +Q D++ Sbjct: 411 MAGGFSVLKDVTKTRVYQLAIYRNRCK----------IFPNSLMTRAPSAELFENQKDED 460 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 LP Y LD I++ +E+++S + Q + E V+ + HL+ +EYKR+Q+ G +IT Sbjct: 461 LLPSYAQLDPILELYIEHDKSINDIVQAGFPREIVQKIIHLVNKNEYKRQQSAPGPRITP 520 Query: 541 KSFGRDRLYPISNKFRDHISEE 562 ++FG++R YPI++ F + ++ Sbjct: 521 RAFGQERRYPITSAFSKQLKKK 542 >gi|51246771|ref|YP_066655.1| glutamine-dependent NAD(+) synthetase [Desulfotalea psychrophila LSv54] gi|50877808|emb|CAG37648.1| probable glutamine-dependent NAD(+) synthetase [Desulfotalea psychrophila LSv54] Length = 551 Score = 547 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 207/573 (36%), Positives = 308/573 (53%), Gaps = 42/573 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + Q NP++GD A N K +A G L++F EL +SGYPP DL+ + FI+ Sbjct: 1 MKIGLVQYNPLIGDFAHNCKKIVSWATKAQEAGCSLVVFPELAVSGYPPLDLLERSVFIE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 +A+D L + G ++ G + + + NSV++ G ++ R K LP Y Sbjct: 61 EHQAALDRLLGELP--GIDVMFGAVEKREGKGGRALYNSVLVAREGRVVYRRRKQLLPTY 118 Query: 121 SEFHEKRTFISG---YSNDPIVFRDIRLGILICEDIWKNSNICKHL----------KKQG 167 F E R F G S G+ ICED+W + L +++ Sbjct: 119 DVFDESRYFEPGRAEESEKFYTLGGTTFGVTICEDVWHDEVGHYALSPVSGMVESCREKN 178 Query: 168 AEF--LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 + +++ASP+ K +R I + P +Y NQVGGQD LIFDG S Sbjct: 179 ISLAAVINISASPFQRGKEAQRRRIFAESALALGAPFLYCNQVGGQDSLIFDGGSLAISE 238 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 + ++ + +E + YD + + + AS EE+ Y A VL +RD Sbjct: 239 RGEVLGEAASCAEDLLV----YDTESQECSAPPRPLAS-------PEESVYQALVLGVRD 287 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y++K F V++GLSGGIDSAL AAIAVDALG ENVQ + LP +Y+S S +DA + A+ Sbjct: 288 YIRKCGFTSVVLGLSGGIDSALTAAIAVDALGAENVQGVALPSQYSSGGSYDDAQSLAEN 347 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LGC + ++PI DL F S ++ + +N+Q+RIRGN+LMALSN +LLTT Sbjct: 348 LGCDFKMIPIKDLFYAFESSLAPIFTGLEEDVTEQNLQARIRGNLLMALSNKFNKLLLTT 407 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY TLYGDM+GG + D+ K V+ L+ + N HG E+IP + + Sbjct: 408 GNKSEMAVGYCTLYGDMNGGLAVISDVPKQLVYALSRYVNRHG---------EIIPENTI 458 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYG 524 K PSAEL+P Q DQ+ LP Y +LD +++ +E+ ++ + V+ V + Sbjct: 459 SKPPSAELKPDQCDQDDLPDYDVLDRVLELHLEDGCGCEEIVAHGFDRQMVQDVLRRVRL 518 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 +EYKR+QA VG K+T+K+FG R +P + FR+ Sbjct: 519 NEYKRKQAAVGLKVTSKAFGYGRRFPNAQNFRN 551 >gi|282861535|ref|ZP_06270599.1| NAD+ synthetase [Streptomyces sp. ACTE] gi|282563351|gb|EFB68889.1| NAD+ synthetase [Streptomyces sp. ACTE] Length = 584 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 213/591 (36%), Positives = 308/591 (52%), Gaps = 44/591 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L++A+ Q++ VGD+AGN A QG L+ F E+ ++GYP EDL + S Sbjct: 1 MPQLRLALNQIDSTVGDLAGNSESVVHWTRHAAEQGAHLVAFPEMVLTGYPVEDLALRSS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNSVVILDAGNI 108 F++A A+ L + D G G +VVG+ + + N+ +L G + Sbjct: 61 FVEASRRALRALAARLADEGFGELPVVVGYLDRSEHTAARYGQPAGSPRNAAAVLHRGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 K +LPNY F E R F+ G S + I + + ICED+W+ + GA Sbjct: 121 ALNFAKHHLPNYGVFDEFRYFVPGDSMPVVRVHGIDVALAICEDLWQEGGRVPAARAAGA 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L S+NASPY +K R E+V + Y+ +GGQDEL+FDG S D + Sbjct: 181 GLLLSINASPYERDKDDTRLELVRKRAQEAGCTTAYLAMMGGQDELVFDGDSIVVDKDGE 240 Query: 229 LAFQMKHFSEQNFMTEWHY-------------DQQLSQWNYMSDDSASTMYIP------- 268 + + FSE + + + D+ +SD+ Sbjct: 241 VLARAPQFSEGSVILDLDLPAAAAEVPSGIVNDELRIDHVVLSDEPLPAYEPELAGGYAQ 300 Query: 269 -LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 L ++E Y+A V+ LR Y KN F V+IGLSGGIDSAL AAIA DALG ENV + +P Sbjct: 301 RLDDDEELYSALVVGLRAYAAKNGFRSVLIGLSGGIDSALVAAIACDALGPENVYGVSMP 360 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIR 387 KY+S S DAA A+ G Y + I + + + + +G+ EN+QSR+R Sbjct: 361 SKYSSDHSKGDAAELARRTGLNYRTVSIEAMFDAYMGELG------LTGLAEENLQSRLR 414 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G LMA+SN ++L NKSE++VGY TLYGD G + P+KD+YKT VF+LA WRN Sbjct: 415 GTTLMAISNQEGQIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSVFRLAKWRNRA 474 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN- 506 G P IP + + K PSAELRP Q D +SLP Y +LD I++ V+ ++ Sbjct: 475 AEERGQTP---PIPEASITKPPSAELRPDQVDTDSLPDYDVLDRILELYVDRDQGRDAIV 531 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 ++ E V ++ +EYKRRQ P GTKI+ K FG+DR PI+N++R+ Sbjct: 532 AAGFDAELVTKTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPITNRWRE 582 >gi|227537569|ref|ZP_03967618.1| NAD(+) synthase [Sphingobacterium spiritivorum ATCC 33300] gi|227242571|gb|EEI92586.1| NAD(+) synthase [Sphingobacterium spiritivorum ATCC 33300] Length = 546 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 189/564 (33%), Positives = 303/564 (53%), Gaps = 31/564 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +G+ N + A Q DLI+F EL I GYP +DL+ FIQ Sbjct: 1 MKIALAQLNYHIGNFEKNNSAIIHTITRAKEQQADLIIFAELAIGGYPAKDLLRNAVFIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 C+ AID + ++ HD ++G P ++ + + N V + G + + K LP+Y Sbjct: 61 NCADAIDLIAANCHD--IACIIGAPIRNTDPEGKSLYNGAVFIQDGKVSHISKKGLLPDY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-------SNICKHLKKQGAEFLFS 173 F E R F + F+ + + +CED+W + + + L + + + Sbjct: 119 DVFDEYRYFEPSRHFNCFKFKGETIALTVCEDLWDDDSSNSYVGDPMEELLLEKPSLIVN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + + R ++ Q++ + P++YVNQVG ++IFDG S + ++ ++ Sbjct: 179 IAASPFSYTHFENRLTVLRKQVARANCPLLYVNQVGAHMDIIFDGRSLALNKGGEIVREL 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F E + + +S + ++ E + A +L LRDY K+ F Sbjct: 239 GKFEEDLQVVTFENGDLVSTNSSITSG--------HTEIALIHEALILGLRDYFLKSGFK 290 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K +GLSGG+DSA+ AA+A +A+G ENV I++P Y+S SL+DA K GC + ++ Sbjct: 291 KATLGLSGGLDSAVVAALACEAIGAENVLAILMPSVYSSNHSLKDALDLVKNAGCTHHII 350 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI D+ F +S+ + ENIQ+R RG +LMA+SN ++L TSNKSE +V Sbjct: 351 PIKDVAQAFEGTLSKAFEGLQPDTTEENIQARTRGTLLMAISNKLGHIVLNTSNKSEAAV 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM+G + + D+YKTQ + LA + N E+IP + + K PSAEL Sbjct: 411 GYGTLYGDMAGSISVIGDVYKTQAYDLAKYINRE---------REIIPQNTIIKPPSAEL 461 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQA 532 RP Q D +SLPPY ILD ++ +++E E+S + +++ V + L+ +E+KR QA Sbjct: 462 RPDQKDSDSLPPYDILDAVLYQLIELEKSGSEVVKTGFDEALVLRISKLVNNAEFKRFQA 521 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 P +++ K+FG R P+ K+ Sbjct: 522 PPILRVSPKAFGSGRSMPLVAKYS 545 >gi|326567613|gb|EGE17726.1| NAD+ synthetase [Moraxella catarrhalis 12P80B1] Length = 529 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 205/515 (39%), Positives = 289/515 (56%), Gaps = 19/515 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 ++ AI Q N VGDIAGN+ K +A +G D+++F EL + GYPPEDL+ + + Sbjct: 25 QMTFAIIQTNFWVGDIAGNVKKMHALTLDAKARGADIVIFPELALVGYPPEDLLLRPTLG 84 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + A+ L G +++G+P D G NS IL G+ K LPNY F Sbjct: 85 ERVREAMAKLAEI---EGIVVILGYPHIDHHGTFNSAAILQDGSQKGFYHKQCLPNYGIF 141 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 E+R F G + ++ + +G+LICEDIW + + LK+ GA+ + +NASP+ K Sbjct: 142 DEQRYFQKGLNQVLFDYKGVTIGLLICEDIW-HDEPIQALKQAGADLVIVINASPFEIGK 200 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R ++T S HLPIIYVN VG QD+++FDG S ++A + F Q M Sbjct: 201 QTARKSLLTRHSSTHHLPIIYVNTVGAQDDIVFDGGSLITQSDGRVAHEGVRFLNQLLMA 260 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + + + D+ + + L EE Y A V+ LRDYV ++ F VI+GLSGGI Sbjct: 261 RFDTQNK-------TFDTQAKAPLVLSEESEMYQALVVGLRDYVNRSGFKGVIVGLSGGI 313 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL IAVDALG + V +M+PY+YT+ SLEDA A A L Y V PIHD V Sbjct: 314 DSALTLCIAVDALGCDRVYAVMMPYEYTAQISLEDAEAQAARLNVSYTVCPIHDAVAGLR 373 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 S ++ L + EN+Q+R RG ILMALSN M+++T NKSE +VGY TLYGDM Sbjct: 374 SALAPLLANSEPDVTEENLQARARGTILMALSNKFGHMVISTGNKSENAVGYSTLYGDMV 433 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF+ LKD+YKT V++LA++RN VIP ++ + PSAELRP+Q DQ+SL Sbjct: 434 GGFDVLKDVYKTDVYRLANYRNRL-------EDNPVIPERVITRPPSAELRPNQKDQDSL 486 Query: 484 PPYPILDDIIKRIVENEESFINN-DQEYNDETVRY 517 Y LD I+K ++++ + + + R Sbjct: 487 GDYETLDSILKMYIDDDLGYKAIVAAGFEPKNCRK 521 >gi|332670746|ref|YP_004453754.1| NAD+ synthetase [Cellulomonas fimi ATCC 484] gi|332339784|gb|AEE46367.1| NAD+ synthetase [Cellulomonas fimi ATCC 484] Length = 555 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 208/572 (36%), Positives = 308/572 (53%), Gaps = 32/572 (5%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L+IA+AQ++ VGD+ GN A A G L++F E+ ++GYP EDL + S Sbjct: 1 MTTLRIALAQIDTCVGDVDGNAAAVLSWARRAADAGAHLVVFPEMTLTGYPIEDLALRAS 60 Query: 62 FIQACSSAIDT---LKSDTHDGGAGIVVGFPRQDQEG----------VLNSVVILDAGNI 108 F + +A+ + G ++VG + +G N V+L G + Sbjct: 61 FRRGAEAALQRTAAELAAAGLGDLAVLVGTVGERGQGDVDAPDDRGLPTNQAVLLQHGRV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 + DK +LPNY F E R F G + + R+G+++CEDIW++ + + Sbjct: 121 VTRYDKHHLPNYGVFDEFRIFAPGDATCVVDVAGRRVGVVVCEDIWQDGGPVAQMDENDV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + L LN SPY K R E+ + V P+ YVN VGGQD+L+FDG SF + Sbjct: 181 DLLVVLNGSPYEEGKGHVRVELAQRRAREVDAPVAYVNLVGGQDDLVFDGGSFVVGTDGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 L F E + + + + PL +E Y A V L YV+ Sbjct: 241 LLAGAPQFVEHLLLWDL--------AERGTAPVRGAVAAPLAPDEEVYRAIVTGLAGYVR 292 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 KN F V++GLSGGIDSAL AAIA DA+G ENV + +P ++S S +DAA AK LG Sbjct: 293 KNGFRSVVLGLSGGIDSALTAAIAADAIGGENVVGVSMPSSFSSAHSKDDAADLAKRLGA 352 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 V PI +V+ F + ++ G+ EN+Q+R+RG +LMA+SN +++ NK Sbjct: 353 DLRVQPIASVVDAFQAQLA------LEGVAEENLQARVRGVLLMAVSNREGHLVIAPGNK 406 Query: 409 SEISVGYGTLYGDMS-GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEK 467 SE++ GY T+Y S GGF PLKD+ K++V+ LA WRN++ G P IP S + K Sbjct: 407 SELATGYATIYDAGSIGGFAPLKDVDKSRVWALARWRNAYAEARGEVP---PIPESSITK 463 Query: 468 SPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSE 526 PSAELRP Q DQ+SLPPY +LD+++ VE+ E + ++ V V L+ +E Sbjct: 464 PPSAELRPGQLDQDSLPPYDLLDEVLDAYVEHAEGRAELLARGFDPAVVDKVVTLVDRAE 523 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 +KRRQ P+G K+TA +FGRDR P+++++R+ Sbjct: 524 WKRRQYPLGPKVTALAFGRDRRLPVTSRWREP 555 >gi|291302410|ref|YP_003513688.1| NAD+ synthetase [Stackebrandtia nassauensis DSM 44728] gi|290571630|gb|ADD44595.1| NAD+ synthetase [Stackebrandtia nassauensis DSM 44728] Length = 586 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 215/594 (36%), Positives = 320/594 (53%), Gaps = 43/594 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L++A+AQ N VGD+ GN A A R G ++ F E+ ++GYP EDLVF++S Sbjct: 1 MRTLRLALAQTNSTVGDLDGNAAAVVEWTARAKRAGAHMVAFGEMMLTGYPVEDLVFRES 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVV---------GFPRQDQE-----GVLNSVVILDAGN 107 F++A ++ L S+ + G G +V G R D + G +++ +L +G Sbjct: 61 FVRASRQRVERLASELAEAGLGGIVVVVGYLDADGPARMDADADPGVGPRDALAVLHSGR 120 Query: 108 IIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 ++ K +LPNY F E R F+SG + + + + + + +CEDIW+ ++ G Sbjct: 121 VVTRYFKHHLPNYGVFDEDRYFVSGDTLEVVRVGGVDVAVTVCEDIWQPGGPFAVARQAG 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + ++NASP+ +K R +V + + + + YVN +GGQDEL+FDG + Sbjct: 181 VGLVVNINASPFERDKDDTRLSLVKRRAAEANATVAYVNVIGGQDELVFDGDTMIVKADG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA-------------------STMYIP 268 +L + F+E+ + + +D A P Sbjct: 241 ELVLRGPRFTEELLLADLTFDDAGDVPEVTDAAMAVRHTEISGGSLPLRRNLITPVKTEP 300 Query: 269 LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY 328 L + + A L LRDYV KN F V+ GLSGGIDSA+ AA+AVDALG + V + P Sbjct: 301 LSDLAEVWGALTLGLRDYVDKNGFASVLFGLSGGIDSAVVAALAVDALGPDRVHAVSNPS 360 Query: 329 KYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRG 388 +Y+S S +DAA A+ G Y V PI +V+ + S +S SG+ EN+Q+R+RG Sbjct: 361 QYSSQHSRDDAADLAQRTGLHYLVEPIQTIVDAYLSQLS------LSGVAVENLQARVRG 414 Query: 389 NILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHG 448 I MALSN ++L NKSE +VGY TLYGD GG+ P+KD+ KT VF+LA WRN+ Sbjct: 415 VIWMALSNQHGHLVLAAGNKSEYAVGYSTLYGDAVGGYAPIKDVPKTLVFELAKWRNAEA 474 Query: 449 ITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-ND 507 G IP +I+ K PSAELRP Q D +SLPPY +LD I+ V+ + + Sbjct: 475 KRRG---EVAPIPDNIITKPPSAELRPDQVDTDSLPPYEVLDAILAGYVDGDAGRDDLVA 531 Query: 508 QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISE 561 ++ V + L+ +EYKRRQ+ GTK+T KSFGRDR PI+N+FR+ S Sbjct: 532 AGHDPAIVDRILRLVDIAEYKRRQSAPGTKVTGKSFGRDRRLPITNRFREGDSR 585 >gi|298530532|ref|ZP_07017934.1| NAD+ synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298509906|gb|EFI33810.1| NAD+ synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 550 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 203/564 (35%), Positives = 307/564 (54%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + QLNPVV D GN +A EA+ QG D+ + EL + GYP DL+ ++ ++ Sbjct: 1 MKIGLLQLNPVVCDFEGNARGIVQACMEASGQGADICVTPELAVIGYPARDLLLREDILE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG---FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 C ++ + +T G ++ FP + E V NS +LD G +I V K+ LP Y Sbjct: 61 KCMQSVRFIARETSGVGPLLLGSPWCFPGRTGE-VYNSACLLDKGRVIKVFSKVLLPEYD 119 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEFL 171 F EKR F + + ++ +G+ ICED W + N + L +QGA+ + Sbjct: 120 VFDEKRYFCAAEAPGVFEYKGKVVGVSICEDAWNDEDFWDRPRGGVNPMQELARQGADII 179 Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAF 231 +++ASP+ K R ++ + I+ NQVGG D+L+F G S F + Sbjct: 180 INMSASPFGLGKHGIRQAMMGSLAVKHRVFFIFCNQVGGFDDLVFPGRSMVFGPDGSIMG 239 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNN 291 + + F F+ + + SD + +P + + A VL RDYV+K+ Sbjct: 240 RGREFERDVFVFD-------TSNPAKSDSHEHDLDVPAEA----WRALVLGTRDYVRKSG 288 Query: 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 F +V++GLSGG+DSAL AA+A ALG ENV +++P ++SP S++D+ A++LG K Sbjct: 289 FSRVLLGLSGGMDSALTAAVAASALGPENVTGVLMPSPHSSPGSIDDSMKLAESLGIKTV 348 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 LPI L+ F + + ENIQSRIRGN+LMA+SN MLL T NKSE+ Sbjct: 349 TLPISSLMQGFDQALEDVFSGMHPDVTEENIQSRIRGNLLMAMSNKWGDMLLNTGNKSEL 408 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +VGY T+YGDM+G L D+ KT V+ +A W ++ G +IP +I+ K PSA Sbjct: 409 AVGYCTIYGDMAGSLAVLADVPKTLVYDIARWLSTKG--------GPIIPEAIINKPPSA 460 Query: 472 ELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRR 530 ELRP Q D++SLP Y ILD+I++ VE S + + + V+ V ++ SE+KR Sbjct: 461 ELRPGQKDRDSLPEYDILDEILRLYVEKGASMQEICTRGFEADVVQKVLDMVNRSEFKRY 520 Query: 531 QAPVGTKITAKSFGRDRLYPISNK 554 QAP G KIT +FG R P++++ Sbjct: 521 QAPPGIKITDVAFGPGRRMPLASR 544 >gi|322435346|ref|YP_004217558.1| NAD+ synthetase [Acidobacterium sp. MP5ACTX9] gi|321163073|gb|ADW68778.1| NAD+ synthetase [Acidobacterium sp. MP5ACTX9] Length = 570 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 220/581 (37%), Positives = 309/581 (53%), Gaps = 46/581 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP VGD GN K A G+DL++F EL + GYPP DL+ K++F+ Sbjct: 2 VKIALAQINPTVGDFVGNTRKILEFAGRAADAGVDLVVFPELAVCGYPPADLLEKRAFVD 61 Query: 65 ACSSAIDTLKSDTHDGG-AGIVVG--FP--RQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 AI ++ T G ++ G P + + V N V++ AG + AV+ K LP Sbjct: 62 RAGEAIGEIQQWTGIAGRPAVLCGSVMPSGVSEGKQVRNVAVLMQAGKVRAVQQKTLLPF 121 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIR----LGILICEDIWKN----------SNICKHLKK 165 Y F E+R F + L + ICED W + + + L + Sbjct: 122 YDVFDEQRYFEPATQQALTSIMTAKGEVPLAVTICEDAWNDKGFWPRRLYAIDPIERLME 181 Query: 166 Q----------GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELI 215 A+ + +++ASP++ K + R E++ + VNQVGG D LI Sbjct: 182 TWDSQPESLRGQAKVIVNISASPFWKGKQQVRQEMLAALAVRHGAVVAMVNQVGGNDSLI 241 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD 275 FDGAS L F E + E + PL + +A Sbjct: 242 FDGASVVMGADGTLIGMGAAFVEDLVIFE------TGAVVEEPTSQKRDVGHPLDDIKAM 295 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 ++A VL RDYV+K F K +IGLSGGIDSAL AAIAV+ALG ENV + +P +Y+S S Sbjct: 296 WDALVLGTRDYVRKCGFSKAVIGLSGGIDSALVAAIAVEALGAENVMGVGMPSEYSSEGS 355 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 +DA A+ LG ++++L IH+ + ++ P G+ EN+Q+RIRG +LMALS Sbjct: 356 KDDARVLAENLGVRFEMLAIHEGYEAYMKMLGPLFAGTPFGLAEENLQARIRGTLLMALS 415 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGP 455 N A++LTT NKSE+SVGY TLYGDM GG + D+ KT+V++L+ + N Sbjct: 416 NKFGALVLTTGNKSEMSVGYCTLYGDMVGGLAVIADVVKTKVYELSRYANRE-------- 467 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDE 513 EVIP + LEK PSAELRP Q D +SLPPY +LD I++ VE S I +Q+ + E Sbjct: 468 -REVIPVATLEKPPSAELRPGQKDTDSLPPYEVLDPILEAYVERYCSAEQIAGEQKVDVE 526 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 VR V L+ SEYKR+QA K+T KSFG R +PI+ K Sbjct: 527 LVRQVLKLVERSEYKRQQAAPVLKVTRKSFGMGRRFPIAAK 567 >gi|300770964|ref|ZP_07080841.1| NAD synthetase [Sphingobacterium spiritivorum ATCC 33861] gi|300762237|gb|EFK59056.1| NAD synthetase [Sphingobacterium spiritivorum ATCC 33861] Length = 546 Score = 544 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 189/564 (33%), Positives = 304/564 (53%), Gaps = 31/564 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +G+ N + A Q DLI+F EL I GYP +DL+ FIQ Sbjct: 1 MKIALAQLNYHIGNFEKNNSAIIHTITRAKEQQADLIIFAELAIGGYPAKDLLRNAVFIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 C+ AI+ + S HD ++G P ++ + + N V + G + + K LP+Y Sbjct: 61 NCADAIELIASHCHD--IACIIGAPIRNTDPEGKSLYNGAVFIQDGKVSHISKKGLLPDY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN-------SNICKHLKKQGAEFLFS 173 F E R F + + F+ + + +CED+W + + + L ++ + + Sbjct: 119 DVFDEYRYFEPSRNFNCFKFKGETIALTVCEDLWDDDSSNSYVGDPMEELLRENPSLIVN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + + R ++ Q++ + P++YVNQVG ++IFDG S + ++ ++ Sbjct: 179 IAASPFSYTHFENRLTVLRKQVARANCPLLYVNQVGAHMDIIFDGRSLALNKSGEIVREL 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F E + + S + ++ E + A +L LRDY K+ F Sbjct: 239 GKFEEDLQVVTFENGDLASANSSITSG--------HTEIALIHEALILGLRDYFLKSGFK 290 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K +GLSGG+DSA+ AA+A +A+G ENV I++P Y+S SL+DA K GC++ ++ Sbjct: 291 KATLGLSGGLDSAVVAALACEAIGAENVLAILMPSVYSSDHSLKDALDLVKNTGCQHHII 350 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI D+ F +S+ + ENIQ+R RG +LMA+SN ++L TSNKSE +V Sbjct: 351 PIKDVAQAFEGTLSKVFEGLQPDTTEENIQARTRGTLLMAISNKLGHIVLNTSNKSEAAV 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM+G + + D+YKTQ + LA + N E+IP + + K PSAEL Sbjct: 411 GYGTLYGDMAGSISVIGDVYKTQAYDLAKYINRE---------REIIPQNTIVKPPSAEL 461 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQA 532 RP Q D +SLPPY ILD ++ +++E E+S + +++ V + L+ +E+KR QA Sbjct: 462 RPDQKDSDSLPPYDILDAVLFQLIELEKSGSEVVKTGFDEALVLRISKLVNNAEFKRFQA 521 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 P +++ K+FG R P+ K+ Sbjct: 522 PPILRVSPKAFGSGRSMPLVAKYS 545 >gi|171059646|ref|YP_001791995.1| NAD+ synthetase [Leptothrix cholodnii SP-6] gi|170777091|gb|ACB35230.1| NAD+ synthetase [Leptothrix cholodnii SP-6] Length = 577 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 224/572 (39%), Positives = 312/572 (54%), Gaps = 45/572 (7%) Query: 12 LNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAID 71 +NP VGD+AGN+ + A A+ QG + + EL + GYPPEDL+ + +F+ AC A+ Sbjct: 23 INPTVGDLAGNLRRIVEAARAAHAQGASVAVAPELALCGYPPEDLLLRPAFLAACEQALA 82 Query: 72 TLKSDTHDG-GAGIVVGFPR-------------QDQE--------GVLNSVVILDAGNII 109 + D G +V+G PR + + G LN +L G +I Sbjct: 83 DCAAALADLAGFHLVLGHPRALSTLAAAGGSDVRTHDRSRSWALQGCLNMASVLSGGRVI 142 Query: 110 AVRDKINLPNYSEFHEKRTFISGYSND----PIVFRDIRLGILICEDIWKNSNICKHLKK 165 A K LPNY F E+R F+SG R G+LICED W + + Sbjct: 143 ASYAKRELPNYQVFDERRYFVSGRDAGLDALVFEAAGRRFGVLICEDAWFD-EPAAAARA 201 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 GA+ L LNASP++ K ++R + + + H LP++Y + VG QDE++FDGASF Sbjct: 202 AGAQVLLVLNASPFHLGKQEEREQRMAERARHAGLPLLYSHLVGAQDEVVFDGASFALQA 261 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 +LA + F+E M + S + +P E + A +RD Sbjct: 262 DGRLAARAPMFAEHTLMLTLDAAGAV---------SGACAELPSLE-AQAWGALTTGVRD 311 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 Y+ KN F IIGLSGGIDSAL AIAVDA+G + + +M+P YT+ S DA A+ Sbjct: 312 YLGKNGFPGAIIGLSGGIDSALVLAIAVDAIGADKIHCVMMPSPYTAEISWVDARDMAQR 371 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG +YD L I + + F + ++ + ENIQ+RIRG +LMALSN +++LTT Sbjct: 372 LGVRYDELSIVPMFDAFRATLAGQFEGRAEDTTEENIQARIRGTLLMALSNKFGSIVLTT 431 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++ GY TLYGDM+GG+ +KD+ KT V++LA WRN G EVIP I+ Sbjct: 432 GNKSEMATGYCTLYGDMAGGYAVIKDVAKTLVYRLAQWRNRQGPI-------EVIPERII 484 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYG 524 + PSAELRP QTDQ+SLPPY +LD I+ +E + S + V V L+ Sbjct: 485 TRPPSAELRPDQTDQDSLPPYEVLDAILSMYMEEDRSIEQIVAAGFAPADVERVTRLIKL 544 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +EYKRRQAPVG +IT + FGRD YPI++KFR Sbjct: 545 NEYKRRQAPVGLRITHRGFGRDWRYPITSKFR 576 >gi|83814287|ref|YP_444548.1| NAD(+) synthase (glutamine-hydrolysing) [Salinibacter ruber DSM 13855] gi|83755681|gb|ABC43794.1| NAD(+) synthase (glutamine-hydrolysing) [Salinibacter ruber DSM 13855] Length = 567 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 191/571 (33%), Positives = 290/571 (50%), Gaps = 41/571 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NP +GD+ GN K A+ +G DL++F EL ++GYPPEDL+ F + Sbjct: 1 MQIALAQINPTIGDLEGNREKILDYARRADDRGADLVVFPELCVTGYPPEDLLENPFFKR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 A +D L G+++G P + + + N+ ++L+ G + K LP Y Sbjct: 61 AVQRTVDHLARALP-ADLGVIIGAPVPNGDRFGKPLHNAALLLENGAVQDRVYKTLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK-------------NSNICKHLKKQG 167 F E R F + +R +R+G+ +CED+W + L Sbjct: 120 DIFDEDRHFEPAEERRLLEWRGLRIGLHVCEDMWNVHQPEGVDQSERYERDPVAELAALD 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + +++ASP+ K + R ++V P + NQVG E+I DG S Sbjct: 180 PDLFVNISASPFSIGKHEVRDKLVEHICRRHERPFLLCNQVGANTEIIHDGDSRVHAADG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 F E W + D A ++A VL +RDY Sbjct: 240 TQVACAASFEEDLLF--WDTESSPEACTTGRDAIADL-----------HDALVLGVRDYY 286 Query: 288 QKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +K F K ++GLSGGIDSA+ A+AV+ALG E V + +P + +S S+ D+ A A L Sbjct: 287 EKTGIFDKALVGLSGGIDSAVTCALAVEALGPERVVGVTMPSEISSEGSVTDSQALADNL 346 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G ++ +PI V+ F +++ G+ EN+QSR RG LMALSN +LL+T Sbjct: 347 GIEFKEIPIKPAVDAFDDMLADEFAGTEPGVAEENVQSRARGVTLMALSNKFGHLLLSTG 406 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE+++GY TLYGD +GG L D+ KT+V++LA N + VIP + +E Sbjct: 407 NKSEVAIGYVTLYGDTNGGVAVLSDVLKTRVYELARHINVRAGAN-------VIPQNTIE 459 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLYG 524 K PSAELR Q D ++LPPY LD I++R VE ++ I + +++ VR V + Sbjct: 460 KPPSAELRAGQKDTDTLPPYETLDAILERYVEQKKELGTIVGETGLDEDLVRGVLRQVDQ 519 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +EYKRRQAP G ++T K+FG R PI ++ Sbjct: 520 NEYKRRQAPPGLRVTEKAFGIGRRIPIVMEW 550 >gi|320107734|ref|YP_004183324.1| NAD+ synthetase [Terriglobus saanensis SP1PR4] gi|319926255|gb|ADV83330.1| NAD+ synthetase [Terriglobus saanensis SP1PR4] Length = 553 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 220/571 (38%), Positives = 305/571 (53%), Gaps = 42/571 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ+NP VGD AGN++ A+R G +L++F EL + GYPP DL+ KK+F++ Sbjct: 1 MKIALAQINPTVGDFAGNVSVILDFALRASRLGAELVIFPELAVCGYPPADLIEKKTFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQ----EGVLNSVVILDAGNIIAVRDKINLPNY 120 A A+ + + T G I+ G + N + G + ++ K+ LP Y Sbjct: 61 AAQEALAQVAASTEKNGLAILCGSVLHSGAVPGKTARNVAALCQRGKVSFIQQKMLLPFY 120 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHLKKQGAE- 169 F E+R F S I + + I ICED W + S+ + L E Sbjct: 121 DVFDEQRYFEPAVSQSLIEINGVNVAISICEDAWNDKGFWPNRLYASDPIERLMSSAEEG 180 Query: 170 ----FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 L +++ASP++ KL R +++ + VNQVGG D L+FDG+SF Sbjct: 181 NAPRLLLNISASPFWRGKLTTRRKMLAALAQRYGAVVAMVNQVGGNDSLVFDGSSFAVAP 240 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 +L Q K F E + + S + ++A VL RD Sbjct: 241 DGRLLAQAKSFEEDLILFD------------TSSAERVDSTAEADDTAQLWDALVLGTRD 288 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 YV+K F K I+GLSGGIDSA+ AAIAVDALG ENV+ I +P +Y+S S+EDA A A+ Sbjct: 289 YVRKCGFKKAIVGLSGGIDSAVVAAIAVDALGAENVKGIGMPSEYSSSGSVEDARALAEN 348 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG +D+ I + + F ++ Q P G+ EN+Q RIRG +LMALSN + A++LTT Sbjct: 349 LGIAFDLFAIRSIYDSFTLALAPSFQGTPFGLAEENLQPRIRGTLLMALSNKTGALVLTT 408 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 NKSE++VGY TLYGDM G + D+ K +V+ LA + N VIP L Sbjct: 409 GNKSEMAVGYCTLYGDMVGALAVIGDVVKMRVYDLARYANRKRA---------VIPADTL 459 Query: 466 EKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLY 523 K PSAELRP Q D +SLPPY +LD I++ VE ES I Q N E VR+V L+ Sbjct: 460 TKPPSAELRPDQKDTDSLPPYEVLDPIVEAYVERYESVGQIAETQGVNAELVRHVVQLIE 519 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 SEYKR+QA K+T KSFG R +PI+ K Sbjct: 520 RSEYKRQQAAPVLKVTQKSFGPGRRFPIAAK 550 >gi|116073675|ref|ZP_01470937.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. RS9916] gi|116068980|gb|EAU74732.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. RS9916] Length = 573 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 203/582 (34%), Positives = 307/582 (52%), Gaps = 41/582 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NP+VGD++GN + A +A Q DL++ EL I GYPP DL+ ++ + Sbjct: 1 MRIALAQINPLVGDLSGNAQRILEASRQAIDQQADLVVTPELAIWGYPPRDLLLNRARVN 60 Query: 65 ACSSAIDTLKSDTHDGGA--GIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 +D L + + A G++VG +G + N+ ++ G V K LP Sbjct: 61 EQQQVMDQLSRELGELNAELGVLVGLVEGTADGQHPRLFNAAALIRQGQWEVVGRKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIW----------KNSNICKHLK 164 Y F E R F + F R +LG+ +CED+W K + L Sbjct: 121 TYDVFDESRYFRPADGPSMLTFPIGDRTWQLGLTLCEDLWVDPTLHGQRLKGPDPIAALA 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASP+ +K RH++ + + P++YVNQVGG DEL+FDGASF Sbjct: 181 TKKCDLLLNLSASPFGRDKTAVRHQLAQQAANRLQCPVVYVNQVGGNDELVFDGASFVML 240 Query: 225 GQ------QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNA 278 + Q+ E + + ++ P+ EE + A Sbjct: 241 PGKGAASAGFMPLQLPSCRESVAVWDA---------KASESSPLASTASPIPVEEELFRA 291 Query: 279 CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLED 338 VL +RDY K F + ++GLSGGIDSAL A IA ALG + VQ +++P ++S S++D Sbjct: 292 LVLGVRDYAGKCGFQQTLLGLSGGIDSALVAVIAAAALGGDRVQGLLMPSPWSSQGSIDD 351 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 AAA A LG LPI L++ + + ++ L P+ + AEN+QSRIRG +LMA++N Sbjct: 352 AAALASRLGLSTQTLPIAPLMHSYDAALTPALAGPPTDVTAENLQSRIRGTLLMAVANQQ 411 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----L 453 +LLTT NKSE++VGY TLYGDM+GG + DLYK+ VF + W +S+ L Sbjct: 412 GQLLLTTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFAVCDWLDSNRSKPCRQDFHL 471 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYND 512 E+I +I EK PSAELRP Q D +SLP Y +LD ++K ++E + + Sbjct: 472 PLDGELIGQAIREKPPSAELRPDQKDSDSLPDYALLDPLLKDLIEERCGREQLLKRGHPA 531 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 V V+ L SE+KRRQA K+++++FG PI++ Sbjct: 532 AEVDRVQRLFRRSEFKRRQAAPLLKVSSQAFGSGWRLPIASG 573 >gi|317154964|ref|YP_004123012.1| NAD+ synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316945215|gb|ADU64266.1| NAD+ synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 556 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 209/572 (36%), Positives = 298/572 (52%), Gaps = 41/572 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + QLNPVVGDI GN A R+ EA G DL L E+ ++GYPP DL+ F+ Sbjct: 1 MKIGVLQLNPVVGDIEGNCAAIRQGVAEARSLGADLCLTPEMAVTGYPPRDLLLYGGFVA 60 Query: 65 ACSSAIDTLKSDTHD---GGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINL 117 A D L + D GG +++G + + V N+ + G + V K L Sbjct: 61 RARGAADALARELEDDAPGGTPLLLGGVEPNPCNLGKPVFNAAFWCEGGAVRRVFRKTLL 120 Query: 118 PNYSEFHEKRTFISGYSND----PIVFRDIRLGILICEDIWKN----------SNICKHL 163 P Y F E R F + D + F+ + + ICED W + + + Sbjct: 121 PTYDVFDEARYFEPAPTGDQAGNILRFKGRTIAVTICEDAWNDKDYWETRSYARDPLEEA 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 G + + +L+ASP + K + R +++ +P++Y NQ GG D+LIFDG S F Sbjct: 181 AVHGPDLILNLSASPLFLGKQRLREDMLGAVARKYGVPLVYANQTGGNDDLIFDGRSCAF 240 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSL 283 L + F+ M + + + E + A V+ Sbjct: 241 GPDGALTGRAPGFTPGVAMFDID-----------APKPDAIAPDDFGREAETWRALVMGT 289 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDYV+K+ F +IGLSGGIDSA+ AA+A +ALG ENV +++P Y+S S++D+ A A Sbjct: 290 RDYVRKSCFSTALIGLSGGIDSAVTAAVAAEALGAENVTCVLMPSPYSSRGSVDDSLALA 349 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 LG LPI ++N + ++ ENIQSRIRGN+LMALSN AMLL Sbjct: 350 ANLGVTTLTLPIAPIMNAYALALAGPFAGLAEDTTEENIQSRIRGNLLMALSNKRGAMLL 409 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TT NKSE++VGY T+YGDMSGGF + D+ KT VF LA W N+H + IP + Sbjct: 410 TTGNKSELAVGYCTIYGDMSGGFAVVSDMDKTGVFALARWYNAH--------VRPAIPEA 461 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLL 522 I+ K PSAELRP Q DQ+SLPPY +LD I+ +E +S ++ +TV V L+ Sbjct: 462 IITKPPSAELRPDQKDQDSLPPYDVLDAILALHIERHQSARQIIGAGFDPQTVDRVLRLV 521 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +E+KRRQA G K+T +SFG P++ + Sbjct: 522 RSAEFKRRQAAPGIKLTPRSFGTGWRMPLACR 553 >gi|114778174|ref|ZP_01453061.1| NAD(+) synthetase [Mariprofundus ferrooxydans PV-1] gi|114551592|gb|EAU54146.1| NAD(+) synthetase [Mariprofundus ferrooxydans PV-1] Length = 509 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 203/531 (38%), Positives = 291/531 (54%), Gaps = 29/531 (5%) Query: 32 EANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ 91 +A + DL++ EL ++GYPPEDL+ + SF+ +A+D + + +V G PR+ Sbjct: 3 QAEAKLCDLVVLPELVVTGYPPEDLLLRPSFMDEVDAAVDAIIKASR--NTCVVFGSPRR 60 Query: 92 DQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY-SNDPIVFRDIRLGILIC 150 + + NSV + G ++ + DK LPNY F E R F G R+G+ +C Sbjct: 61 FGKVLRNSVFLAQHGKLLGIYDKQFLPNYGVFDECRYFEPGDGEQCLFDVNAWRVGVGVC 120 Query: 151 EDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGG 210 ED+W + + + +LNASP++ K +R +V + P++YVN VGG Sbjct: 121 EDLWHDELALRQQSMC-CDVWLNLNASPFHVGKQSEREALVRRRAISFSTPLVYVNPVGG 179 Query: 211 QDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ 270 QDE++FDG S D L + F + + + + + + + Sbjct: 180 QDEIVFDGGSHVVDAAGHLIMRAPLFECRGTVVDL------------AAVGQTDIAPLSE 227 Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKY 330 Y A V + DYV +N H+V+IGLSGGIDSAL AAIAVDALG NV ++LP +Y Sbjct: 228 SLAQMYQALVTGVSDYVLRNGCHQVVIGLSGGIDSALTAAIAVDALGAANVLGVLLPSRY 287 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE---EPSGIVAENIQSRIR 387 +S SL DA A + LG LPI V+ ++++ + ENIQ+R+R Sbjct: 288 SSDHSLADATALVENLGMDAITLPIAAGVDTVEQILAETFAGWGKSEPDVTEENIQARMR 347 Query: 388 GNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSH 447 G +LMA+SN + M+LTT NKSE++VGY TLYGDM+GGF LKD+YKT+VF L W N Sbjct: 348 GLLLMAISNKTGRMVLTTGNKSEMAVGYATLYGDMAGGFAVLKDVYKTEVFALCRWLNRD 407 Query: 448 GITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND 507 +EVIP + + K PSAELRP Q D +SLP Y +LD I+ +E Sbjct: 408 ---------SEVIPENTITKPPSAELRPDQKDSDSLPDYDVLDAILTASIEERLGVDEIA 458 Query: 508 Q-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 Y+ V+ V +L +EYKRRQAP G KIT ++FGRDR YPI++ FR+ Sbjct: 459 ARGYDKAEVKRVVRMLQLAEYKRRQAPPGVKITERAFGRDRRYPITHGFRE 509 >gi|323699831|ref|ZP_08111743.1| NAD+ synthetase [Desulfovibrio sp. ND132] gi|323459763|gb|EGB15628.1| NAD+ synthetase [Desulfovibrio desulfuricans ND132] Length = 552 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 198/569 (34%), Positives = 294/569 (51%), Gaps = 39/569 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI + QLNP+VGD+ GN AK A A+ G DL + +E+ ++GYPP DL+ SF+ Sbjct: 1 MKIGLLQLNPIVGDLDGNAAKILDAARRASALGADLCVTSEMALTGYPPRDLLLYGSFVD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 + L + DG ++ G ++ + V N + G I+ K LP Y Sbjct: 61 RARQRAEDLARELADGPPLLL-GAVERNLSGQGKPVFNCALFCKGGEIVRSVRKTLLPTY 119 Query: 121 SEFHEKRTFISGYSNDP----IVFRDIRLGILICEDIWKN----------SNICKHLKKQ 166 F E R F DP + + + +CED W + + + Sbjct: 120 DVFDEARYFEPAPPGDPEANILRLDGATVAVTVCEDAWNDKDYWDARTYARDPLEEAAAF 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + + +L+ASP + K R +++ P++Y NQ GG D+L+FDG S F Sbjct: 180 RPDVIVNLSASPLFLGKQVLREDMLGAVARKYGTPMVYANQTGGNDDLVFDGRSCAFAPD 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 L + + F E + + + + + E + A V RDY Sbjct: 240 GALMARARGFEEDVLLVDTD-----------APSANTIAEDDFCREAETWRALVTGTRDY 288 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K+ F ++GLSGGIDSA+ AA+A +ALG +NV +++P Y+S S++D+ A+ L Sbjct: 289 VRKSGFATALVGLSGGIDSAVTAAVAAEALGADNVTCVLMPSPYSSRGSIDDSLELAENL 348 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G K LPI ++ F ++ ENIQSRIRGN+LMALSN A+LLTT Sbjct: 349 GVKTLTLPIEPIMAEFERTLAGPFAGYGPDTTEENIQSRIRGNLLMALSNKYGALLLTTG 408 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE++VGY T+YGDMSGGF + D+ KT VF LA W N+H + IP +I+ Sbjct: 409 NKSELAVGYCTIYGDMSGGFAVISDVDKTGVFALAKWYNAH--------VGPNIPGAIIT 460 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGS 525 K PSAELRP Q DQ+SLP Y +LD I+ VE++ S + Y++ V V +L+ + Sbjct: 461 KPPSAELRPDQKDQDSLPEYAVLDAILALHVEHQRSRREIIEAGYDEAVVNKVLNLVRAA 520 Query: 526 EYKRRQAPVGTKITAKSFGRDRLYPISNK 554 E+KRRQA G K+T +SFG P++ + Sbjct: 521 EFKRRQAAPGIKLTPRSFGTGWRMPLACR 549 >gi|294506296|ref|YP_003570354.1| glutamine-dependent NAD(+) synthetase [Salinibacter ruber M8] gi|294342624|emb|CBH23402.1| glutamine-dependent NAD(+) synthetase [Salinibacter ruber M8] Length = 567 Score = 537 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 192/571 (33%), Positives = 288/571 (50%), Gaps = 41/571 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NP +GD+ GN K A+ G DL +F EL ++GYPPEDL+ F + Sbjct: 1 MQIALAQINPTIGDLEGNREKILDYARRADDCGADLAVFPELCVTGYPPEDLLENPFFKR 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 A +D L G+++G P + + + N+ ++L+ G + K LP Y Sbjct: 61 AVQRTVDHLAQALP-SDLGVIIGAPVPNGDRFGKPLHNAALLLENGAVQDRVYKTLLPTY 119 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK-------------NSNICKHLKKQG 167 F E R F + +R +R+G+ +CED+W + L Sbjct: 120 DIFDEDRHFEPAEERRLLEWRGLRIGLHVCEDMWNVHQPEGVDQSERYERDPVAELAALD 179 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + +++ASP+ K + R ++V P + NQVG E+I DG S Sbjct: 180 PDLFVNISASPFSIGKHEVRDKLVEHICRRHERPFLLCNQVGANTEIIHDGDSRVHAADG 239 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 F E W + D A ++A VL +RDY Sbjct: 240 TQVACAASFEEDLLF--WDTESSPEACTTGRDAIADL-----------HDALVLGVRDYY 286 Query: 288 QKNN-FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +K F K ++GLSGGIDSA+ A+AV+ALG E V + +P + +S S+ D+ A A L Sbjct: 287 EKTGIFDKALVGLSGGIDSAVTCALAVEALGPERVVGVTMPSEISSEGSVTDSQALADNL 346 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G ++ +PI V+ F +++ G+ EN+QSR RG LMALSN +LL+T Sbjct: 347 GIEFKEIPIKPAVDAFDDMLADEFAGTEPGVAEENVQSRARGVTLMALSNKFGHLLLSTG 406 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE+++GY TLYGD +GG L D+ KT+V++LA N + VIP + +E Sbjct: 407 NKSEVAIGYVTLYGDTNGGVAVLSDVLKTRVYELARHINVRAGEN-------VIPQNTIE 459 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRYVEHLLYG 524 K PSAELR Q D ++LPPY LD I+KR VE ++ I + +++ VR V + Sbjct: 460 KPPSAELRAGQKDTDTLPPYETLDAILKRYVEQKKELGTIVGETGLDEDLVRGVLRQVDQ 519 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +EYKRRQAP G ++T K+FG R PI ++ Sbjct: 520 NEYKRRQAPPGLRVTEKAFGIGRRIPIVMEW 550 >gi|159904106|ref|YP_001551450.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9211] gi|159889282|gb|ABX09496.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9211] Length = 576 Score = 537 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 202/584 (34%), Positives = 317/584 (54%), Gaps = 37/584 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ Q+N +VGD+ GN K +E ++ +DL++ EL + GYPP DL+ + + Sbjct: 1 MRLALGQINSLVGDLKGNSHKILTVCKEVAQKEVDLLITPELSLWGYPPRDLLLDPALVY 60 Query: 65 ACSSAIDTLKSDTHDG--GAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLP 118 + ++ + ++VG + + N++ ++ + K LP Sbjct: 61 YQWTILNKMVGSIEKDCPNLSVLVGVAEPTPDCQIPKLFNAIALVQRKGWRIIARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNS----------NICKHLK 164 Y F EKR F ++ + + R+G+ ICED+W + L+ Sbjct: 121 TYDVFDEKRYFRPAENSGILDIEINSKPWRIGLTICEDLWVEEKLQGQRVEGADPLSDLR 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 ++G + L +++ASP+ K R E+ + P+IYVNQVGG DEL+FDGASF D Sbjct: 181 EKGIDLLINMSASPFSLKKKSLRKELAVKASQRLKCPVIYVNQVGGNDELVFDGASFAID 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 + +L+ ++ + E H D Y S + +EEE N VL ++ Sbjct: 241 QKGELSLELPRYKE-------HIDIWEPGRTYKIPPSLTK----EREEEMLMNTLVLGVK 289 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K +F V++GLSGGIDSAL A IA ALG NV +++P ++S SL DA AK Sbjct: 290 DYAEKCDFKSVLLGLSGGIDSALVAVIATAALGAANVHGVLMPSPWSSNNSLTDALNLAK 349 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + + +PI L+N + + + + E P + AEN+Q+RIRG +LMA++N + +LL+ Sbjct: 350 RLGIQTNTIPISSLMNAYDTELKEVFGESPKDVTAENLQARIRGTLLMAIANQQQHLLLS 409 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF L W +S + GL E+ Sbjct: 410 TGNKSELAVGYCTLYGDMNGGVSVIGDLYKTSVFNLCDWLDSKAADNCKESLGLPKQKEL 469 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I SI K PSAELRP Q D +SLP Y +LD I+K ++E+ + I + ++ E V+ + Sbjct: 470 IGVSIRTKPPSAELRPGQLDSDSLPEYKVLDPILKALIEDRINPIELIKSGFDSEVVQRI 529 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHISEE 562 + LL SE+KRRQAP K++ ++FG PI+ + + E Sbjct: 530 QLLLKQSEFKRRQAPPVFKVSNQAFGSGWRVPIAASYSRLLKNE 573 >gi|325981539|ref|YP_004293941.1| NAD+ synthetase [Nitrosomonas sp. AL212] gi|325531058|gb|ADZ25779.1| NAD+ synthetase [Nitrosomonas sp. AL212] Length = 543 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 220/558 (39%), Positives = 312/558 (55%), Gaps = 27/558 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IAIAQ+N VGDIAGN AK A ++A + G LI+ EL +SGYPP DL+ +++F Q Sbjct: 1 MYIAIAQINCTVGDIAGNAAKILAAVKQAQQAGATLIITPELALSGYPPADLLLRETFCQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + L D ++VG P D+ + N+ I+ G I K L F+ Sbjct: 61 LCQQTLTQLAQSVDD--ITLIVGHPSFDENKLYNAASIIHKGQIQHTYHKRILNKSPFFN 118 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E F +G I+ GI IC D W + + Q + + LNAS Y+ NK Sbjct: 119 ETYYFDAGTQPYLFELEGIKFGIDICADFWLGHLPAETDQPQ-PDIVLVLNASAYHINKQ 177 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R++ I H +P+I+ N +GGQDEL+FDGASF +GQ +L Q+ F+E + E Sbjct: 178 VSRYQTTHQFIKHTGIPVIHTNLIGGQDELVFDGASFAMNGQGELTHQLSEFAEAIELIE 237 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + + Y A L +RDYV+KN F V++GLSGG+D Sbjct: 238 IQ----------NKQPVKGKLMPAQSPVASIYQALCLGVRDYVRKNAFPGVLLGLSGGVD 287 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL AIAVDALG + ++T+M+P +YT+ SLEDA A+ LG K+ I L + + Sbjct: 288 SALALAIAVDALGADQIRTVMMPTRYTASMSLEDANEMAELLGVKHIECDIESLFDLYLK 347 Query: 365 LMSQFLQEEPS----GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 +++ P + ENIQ+RIRG +LMALSN++ +M+LTT NKSE++VGY TLYG Sbjct: 348 KIAEDFHISPDLADFNTMPENIQARIRGTLLMALSNYTGSMVLTTGNKSEMAVGYCTLYG 407 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQ 480 DM+GGF LKD+ KT V+QL +RN + VIP I+ ++PSAELR +QTDQ Sbjct: 408 DMTGGFAVLKDISKTLVYQLCEYRNQ---------IQRVIPERIIHRAPSAELRLNQTDQ 458 Query: 481 ESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKIT 539 ++LP Y +LD II+ VE + Y++ V V L++ +EYKRRQ+P G +IT Sbjct: 459 DNLPAYEVLDGIIEAYVEKNLTPAEIIALHYDEVDVAKVIQLIHSNEYKRRQSPPGIRIT 518 Query: 540 AKSFGRDRLYPISNKFRD 557 FG YPI + F++ Sbjct: 519 HCDFGTAWRYPIVSHFKN 536 >gi|325105211|ref|YP_004274865.1| NH(3)-dependent NAD(+) synthetase [Pedobacter saltans DSM 12145] gi|324974059|gb|ADY53043.1| NH(3)-dependent NAD(+) synthetase [Pedobacter saltans DSM 12145] Length = 546 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 200/564 (35%), Positives = 294/564 (52%), Gaps = 31/564 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN +GD + NI K + +G DL++F E+ + GY P D + F+ Sbjct: 1 MKIALAQLNYCIGDFSSNIDKIISVLNDEKERGTDLVVFAEMSVCGYLPNDFLNYNQFVI 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 C +I+ + H G +VG P + + + NS + G + V K LP Y Sbjct: 61 KCQESIEQIAQ--HAVGIACIVGAPEVNPILEGKDLYNSAFFFEEGAVKQVVRKSLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-------ICKHLKKQGAEFLFS 173 F E R F S I F+ ++ + ICED+W N L K+ +F+ + Sbjct: 119 DIFDEYRYFESAVDFKCIEFKGYKIAVTICEDLWNLGNNPLYKSCPMDELIKEEPDFMIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + ++R I++ LP++YVNQVG +LIFDG S FD + ++ Sbjct: 179 IAASPFDYKHEEQRLMILSQNSRKYQLPLLYVNQVGANTDLIFDGGSLVFDKAGDIVAEL 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 +F E + S I + Y A VL +RDY K+ F Sbjct: 239 AYFKEDVQVFNIE--------QLRSSIVLGEKSIQKERVGQVYEALVLGIRDYFHKSGFR 290 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +GLSGGIDSA+ A+AV+ALG ENV ++LP KY+S S++DA A LGC+Y + Sbjct: 291 TATLGLSGGIDSAVVCALAVEALGAENVFPVLLPSKYSSDHSIKDAIDLANNLGCQYTTI 350 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + F ++ P + ENIQ+R RG +LMA SN +LL TSNKSE +V Sbjct: 351 PITKITESFEESLADEFAGLPQNLAEENIQARTRGVLLMAFSNKFGHILLNTSNKSECAV 410 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM G + + D YKTQV++LA + N E+IP + + K+PSAEL Sbjct: 411 GYGTLYGDMCGAISVIGDCYKTQVYKLADYINRE---------REIIPKNTITKAPSAEL 461 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQA 532 RP Q D +SLP Y +LD+I+ +E ++S + ++ V V +L+ +E+KR Q Sbjct: 462 RPDQKDSDSLPEYDLLDEILLEYIEMQKSADEIIEAGFDSPVVHRVTNLVNKAEFKRFQT 521 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 +I+ KSFG R PI K++ Sbjct: 522 APILRISPKSFGIGRRMPIVAKYK 545 >gi|224370800|ref|YP_002604964.1| NadE [Desulfobacterium autotrophicum HRM2] gi|223693517|gb|ACN16800.1| NadE [Desulfobacterium autotrophicum HRM2] Length = 544 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 222/567 (39%), Positives = 311/567 (54%), Gaps = 39/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQ NPV+GD NI + EA G +LI+F EL ISGYPP DL+ + FI Sbjct: 1 MKIAMAQTNPVIGDFDFNIQAMIKRALEARALGCELIVFPELSISGYPPGDLLERNDFID 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 +A+ L G G++ G ++ + + NS ++ + NI+A DK LP Y Sbjct: 61 NQLNALQELIHSIR--GIGVLCGVVNREICQGERRLFNSALLFEEQNILARTDKQLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEF 170 F E R F G + I ++ + LGI ICEDIW + N L GA+ Sbjct: 119 DIFDELRYFTPGPKSSLISYKGLNLGITICEDIWNDEAGLGQKHYDRNPVADLASLGADL 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 ++ ASP++ K R+ ++ +H + P+I+VNQVGG D +FDG S Q ++A Sbjct: 179 FINIAASPFHGGKQDLRNTLLKKITAHYNRPLIFVNQVGGNDSTLFDGLSLALTAQGEVA 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 + FSE + + + +DD A A V+ RDYV K Sbjct: 239 ARAMDFSEDLVVFDTTTQKGDCHGVSTTDDQA------------ILKALVMGTRDYVTKC 286 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F + IIG SGGIDSAL AAIAV ALG++NV+TI +P YTS Q++ED A A LG + Sbjct: 287 GFKQAIIGSSGGIDSALTAAIAVAALGRKNVKTIFMPSIYTSKQNIEDTKALALNLGISW 346 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 +PI + + F +S E GI +NIQ+RIRG ILMA SN +MLL T NKSE Sbjct: 347 QSIPIAPMYDAFL-TLSDTFNPENPGITEQNIQARIRGTILMAFSNKEGSMLLATGNKSE 405 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++VGY TLYGDM GG + DL K +V++++ N T IP SILEK+PS Sbjct: 406 MAVGYSTLYGDMCGGLAVIGDLPKKKVYEISRLINRERKT---------IPLSILEKAPS 456 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKR 529 AEL P QTDQ+ LP Y I+D ++K VE+ +S + Q + TV + + +EYKR Sbjct: 457 AELAPDQTDQDDLPSYDIIDAVVKAHVEDHQSIEDMVTQGLDRSTVNEIVQRITRNEYKR 516 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFR 556 QAP ++TAK+FG R +P++ ++R Sbjct: 517 YQAPPILRVTAKAFGAGRRHPMAQRYR 543 >gi|256371064|ref|YP_003108888.1| NAD+ synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256007648|gb|ACU53215.1| NAD+ synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 571 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 219/583 (37%), Positives = 310/583 (53%), Gaps = 41/583 (7%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 ++ L I AQLN VG + N R A E A G+D++ F EL ++GYPPEDL+ K + Sbjct: 1 MRSLVIQAAQLNLTVGAVRRNRDAVRAAIESARAAGVDVVAFPELTLTGYPPEDLLLKPA 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 FI+ +A+D L D VVGF ++ + + NS +L G + AV K LPNY+ Sbjct: 61 FIEEQRAALDELAGSCRD--IVAVVGFVDRESD-LHNSAAVLADGAVQAVYHKQLLPNYT 117 Query: 122 EFHEKRTFISGYSNDPIV-FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F E R F G P+V +RLG+ ICED W + GAE + +NASPY Sbjct: 118 VFDEARYFQPGSVAPPVVEVNGVRLGLAICEDAWSPTGAIMQAAVAGAEVVVVINASPYE 177 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 + R +V + + H+ + YVN VGGQDEL+FDG SF D + + F E N Sbjct: 178 AGRQATRERLVAVRAADAHVAVSYVNLVGGQDELVFDGGSFVVDAVGAVIARAPQFREAN 237 Query: 241 FMTEWHYDQQLSQWNY---------------------------MSDDSASTMYIPLQEEE 273 + E + + + + Sbjct: 238 LVVELELRGDRYRQRLVDPRGKVALGTSSEPAVRLATPGVRVARDPMPLAPAPVDGFDPG 297 Query: 274 ADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSP 333 Y A VL+ DYV+K ++ +SGGIDSAL A IAVDALG + + + LP +Y+S Sbjct: 298 EVYAALVLATSDYVRKTGVPGALVAVSGGIDSALVATIAVDALGPDALTLVALPSRYSSE 357 Query: 334 QSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMA 393 SL DA A LG +V+ I ++S SG+V EN+QSR+RG ++MA Sbjct: 358 GSLRDARLLADRLGVTLEVIAIEPAHAALLEMLSPATAT--SGVVEENLQSRVRGTVMMA 415 Query: 394 LSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGL 453 LSN S ++LTT NKSE++VGY TLYGDM+GGF L+DLYK QV+ LA W N Sbjct: 416 LSNASGRLVLTTGNKSELAVGYSTLYGDMAGGFAVLRDLYKEQVYALARWVNDRAGI--- 472 Query: 454 GPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDE 513 + IP +IL K PSAELRP Q D +SLPPY ILD +++ +++ + + + + E Sbjct: 473 ----DRIPTAILAKPPSAELRPGQLDTDSLPPYEILDRVLRSLIDEDRTAAECE-GVDPE 527 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 R +E ++ +EYKRRQ P+G +I+ ++FG+DR PI N++R Sbjct: 528 LARTIEAMVDRAEYKRRQGPIGPRISERAFGKDRRMPIVNRWR 570 >gi|229820340|ref|YP_002881866.1| NAD+ synthetase [Beutenbergia cavernae DSM 12333] gi|229566253|gb|ACQ80104.1| NAD+ synthetase [Beutenbergia cavernae DSM 12333] Length = 547 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 202/563 (35%), Positives = 298/563 (52%), Gaps = 22/563 (3%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQ+N VGD+ GN R A G DL+ F E+ ++GYP EDL + S Sbjct: 1 MSTLRLALAQVNSAVGDLEGNAQTVLRLALAAQAAGADLVAFPEMVLTGYPIEDLALRGS 60 Query: 62 FIQACSSAIDTLKSDTHD---GGAGIVVG-FPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 F +A ++ L + D G +VVG N+ +L G ++A K +L Sbjct: 61 FRRAVAAQERRLAAALVDEGAGDVHVVVGSLSEAADGRPTNTAAVLRDGRVVARYTKHHL 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 PNY F E R F SG + R+G+ ICEDIW++ L G + L +N S Sbjct: 121 PNYGVFDEYRIFASGSDPVVVDVAGHRVGLAICEDIWRDGGTVAQLASPGVDLLLVINGS 180 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFS 237 PY K R + + + + P+ YVN +GGQD+L+FDG SF D + + F Sbjct: 181 PYERGKGYLRSRLAAERAAELSAPVAYVNLIGGQDDLVFDGGSFVLDVDGTVVARSPTFD 240 Query: 238 EQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 E + + + Y+A VL LRDY +KN F V++ Sbjct: 241 EDLL-------LLDLPGAGDPPEQPGHVARVDDDTAQMYDAVVLGLRDYARKNGFTDVVL 293 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 G+SGGIDSAL A +A DA+G ++V + +P Y+S SL DA A+ G Y PI Sbjct: 294 GISGGIDSALTATVACDAVGADHVLGVAMPSAYSSEHSLADARELAERTGLTYREQPIEP 353 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 V+ F + G+ AEN+Q+R+RG +LMA+SN +++ NKSE++VGY T Sbjct: 354 FVDAFQGEL------RLDGVPAENLQARVRGVVLMAISNAEGHLVIAPGNKSELAVGYST 407 Query: 418 LYGDMS-GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 +Y S GGF PLKD+ KT+V++LA +RN+ +G P IP S + K PSAELRP Sbjct: 408 IYDAGSIGGFAPLKDVLKTRVWELARYRNARARAAGETP---PIPESSITKPPSAELRPG 464 Query: 477 QTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVG 535 Q D +SLP Y +LDD++ VE + + + V V L+ +E+KRRQ P+G Sbjct: 465 QKDSDSLPDYELLDDVLDAYVERALGRDELEASGFAPDVVDLVLRLVDRAEWKRRQYPLG 524 Query: 536 TKITAKSFGRDRLYPISNKFRDH 558 K+T+ +FGRDR P+++++R+ Sbjct: 525 PKVTSLAFGRDRRLPVTSRWREE 547 >gi|319943881|ref|ZP_08018162.1| NAD synthetase [Lautropia mirabilis ATCC 51599] gi|319743114|gb|EFV95520.1| NAD synthetase [Lautropia mirabilis ATCC 51599] Length = 548 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 222/561 (39%), Positives = 313/561 (55%), Gaps = 18/561 (3%) Query: 4 KLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFI 63 LKIA AQLN VGD+AGN + A A +G ++L EL + GY P D +F+ +F Sbjct: 2 SLKIACAQLNQRVGDMAGNAERIIAAAARAAGEGAQVLLTPELSLCGYLPGDNLFRPAFQ 61 Query: 64 QACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 Q +A++T++ + + G VVG+P + ++ + G +A K LP+Y Sbjct: 62 QQVDAAVETIRQASAEQPGLHWVVGYPVLREGRRHSAAGVFHQGRQVAEYLKAELPDYGV 121 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E R F +R +L CED W + + AE + SLNASP+ Sbjct: 122 FDETRYFQPQADATVFTVAGVRCALLTCEDTWLPAAPARARTAG-AELVLSLNASPFQSA 180 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 K R + + + + ++ N VGGQDEL+FDG S D Q +LA + F E + Sbjct: 181 KGDLRVDTLRSNVCAQGMAVVACNLVGGQDELVFDGQSLALDAQGRLAARAPSFVEDLLL 240 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + A +M L+ Y A VL +RDY+ KN F V++GLSGG Sbjct: 241 VTVERGADGALA------LAGSMAPALERLPEIYQALVLGIRDYIGKNGFGGVVLGLSGG 294 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSAL A+AVDALG E V+T+M+P YT+ SL DA A LG K++VLPI + F Sbjct: 295 IDSALTLALAVDALGAERVRTVMMPSPYTADISLADAKDMAARLGVKHEVLPIAPCFDAF 354 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 ++ + ENIQ+RIRG +LMA+SN + ++LTT NKSE++VGY TLYGDM Sbjct: 355 RGTLASTFAGLSEDLTEENIQARIRGTLLMAISNKTGWLVLTTGNKSELAVGYSTLYGDM 414 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 +GGF PLKD+ KT V+QL++WRN+ VIP I+ + PSAELRP QTDQ+S Sbjct: 415 AGGFAPLKDVLKTVVYQLSNWRNTQSP---------VIPERIITRPPSAELRPDQTDQDS 465 Query: 483 LPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LPPY +LD II+ +E + + + V V LL +EYKR+Q PVG ++TA+ Sbjct: 466 LPPYDVLDRIIQGYMEEDRPAASLVADGLPVDAVAQVVRLLRLAEYKRQQGPVGPRVTAR 525 Query: 542 SFGRDRLYPISNKFRDHISEE 562 +FGRD YPI++ FR+ +S + Sbjct: 526 AFGRDWRYPITSAFREPVSGQ 546 >gi|284929537|ref|YP_003422059.1| NH(3)-dependent NAD(+) synthetase [cyanobacterium UCYN-A] gi|284809981|gb|ADB95678.1| NH(3)-dependent NAD(+) synthetase [cyanobacterium UCYN-A] Length = 561 Score = 534 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 211/577 (36%), Positives = 315/577 (54%), Gaps = 43/577 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI IAQLNP+VG++ N ++ A ++ ++L+L EL + GYPP+DLV +FIQ Sbjct: 1 MKILIAQLNPIVGNLKYNADSIYKSAILAKQKNVELLLTPELSLCGYPPKDLVLNTNFIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD-------QEGVLNSVVILDAGNIIAVRDKINL 117 + L ++VG ++ ++ + NS+V+L I + K L Sbjct: 61 NSWLELQKLAKKIPPK-LAVLVGLVTKNYYSEIKGEKPLFNSIVLLQNNAIKQIFHKRLL 119 Query: 118 PNYSEFHEKRTFISGY-------SNDPIVFRDIRLGILICEDIWKNS----------NIC 160 PNY F EK F SG S+ R+G+ ICED+W N Sbjct: 120 PNYDVFDEKHYFESGKVSSFFELSSSSKRNESSRIGVTICEDLWNEESFWSKRNYKNNPI 179 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 + L + + + +L+ASPY NK K R I+ PIIYVNQ+GG D+LIFDG S Sbjct: 180 RDLVRYKVDLIVNLSASPYVINKQKTRESILKHSAKLYQTPIIYVNQIGGNDDLIFDGHS 239 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 + + ++ + K F + + E+H + + + + + ++A V Sbjct: 240 CAVNKKGEVVLRTKGFQIRTEIIEYHQSIKDLTLSLNKNSITAEEEV--------WSALV 291 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L L+DYV K F KV++GLSGGIDS+L A+IAV+ALG +NV I++P Y+S S+ DA Sbjct: 292 LGLKDYVIKCGFSKVVLGLSGGIDSSLVASIAVEALGAKNVLGILMPSPYSSQHSITDAK 351 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A LG ++PI +++ + + + GI EN+QSRIRGNILMA++N Sbjct: 352 HLADNLGINSYMIPIDNIMLAYTYSLDVLFKTVDIGIAEENLQSRIRGNILMAIANKFGH 411 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVI 460 +LL+T NKSEIS+GY TLYGDM+GG + D+ KTQVF L W N E+I Sbjct: 412 LLLSTGNKSEISIGYCTLYGDMNGGIGVIADVSKTQVFSLCKWLNKSQ---------EII 462 Query: 461 PPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVE 519 P +IL K PSAEL+P+Q DQ+SLP Y ILDD++ R + + +S + + + + V Sbjct: 463 PINILLKPPSAELKPNQVDQDSLPSYNILDDLLNRFINHHQSIQELHKVGFEYDLLYRVA 522 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 L+ +E+KR+QAP G KIT ++FG PI+++ Sbjct: 523 KLIIRAEFKRKQAPPGLKITNRAFGTGWRMPIASQLE 559 >gi|326802565|ref|YP_004320384.1| NAD+ synthetase [Sphingobacterium sp. 21] gi|326553329|gb|ADZ81714.1| NAD+ synthetase [Sphingobacterium sp. 21] Length = 547 Score = 534 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 194/562 (34%), Positives = 303/562 (53%), Gaps = 30/562 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IAIAQ N +G+ N K EA R+G DL++F E+ I GY +DL +SF+ Sbjct: 1 MIIAIAQTNYHIGNFERNTEKIIATIAEAKRKGADLVVFPEITIGGYLAKDLFRYRSFLD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 AC ++I+ + + G ++G P + + + N+ + + G + K LP+Y Sbjct: 61 ACETSIEQIAASC--VGIACIIGAPVRSKLTKGKQLYNAALFIVDGAVKDTVHKTLLPDY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK-------NSNICKHLKKQGAEFLFS 173 F E R F + + ++ R+ + ICED+W + L KQ + + Sbjct: 119 DVFDEYRYFEPNNTFKCVDYKGNRIALTICEDLWNEHFPSLYPQDPMIELAKQQPNIMIN 178 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 + ASP+ + + R +VT LP +YVN +G ++IFDG S FD + +L + Sbjct: 179 VAASPFSESHFEARCAVVTAHSKRHALPALYVNTIGAHADIIFDGRSLVFDEKAKLIDVL 238 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F+E + +T+Y + + A VL ++D+ K+ F Sbjct: 239 NPFAE-------DLRYYQLNGKELVARQLTTVYKEPESIVNIHEALVLGIKDFFAKSGFK 291 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 K I+GLSGGIDSA+ AA+A +ALG NV +++P Y++ S++DA LGC ++V+ Sbjct: 292 KAILGLSGGIDSAVVAALACEALGSTNVMGVLMPSIYSTGHSVDDAMDLVGNLGCLHEVI 351 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + F ++M++ + + + I ENIQ+R+R +LMA+SN +LL TSNKSE +V Sbjct: 352 PIKEATEAFDNMMAKAFKGKENDITEENIQARVRAIVLMAMSNKHGYILLNTSNKSEAAV 411 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GYGTLYGDM+G + D+ KT+V+QLA + N +GI VIP + + K+PSAEL Sbjct: 412 GYGTLYGDMAGSLGVIGDVLKTKVYQLAHYINRNGI---------VIPENTITKAPSAEL 462 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQA 532 RP Q D +SLP Y +LD I+ R VE E S +++ V+ V L+ GSE+KR Q+ Sbjct: 463 RPDQKDSDSLPEYNVLDAILHRYVELEMSSKEIIADGFDEALVQRVIKLVVGSEFKRFQS 522 Query: 533 PVGTKITAKSFGRDRLYPISNK 554 P ++T K+FG R P+ K Sbjct: 523 PPILRVTRKAFGVGRAMPLVAK 544 >gi|124026550|ref|YP_001015665.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. NATL1A] gi|123961618|gb|ABM76401.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. NATL1A] Length = 569 Score = 534 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 219/576 (38%), Positives = 316/576 (54%), Gaps = 36/576 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQLNPV+GD+ GN K EE + +DL++ EL + GYPP+DL+F + Sbjct: 1 MKLALAQLNPVIGDLDGNSEKIFEVCEEIKDKDVDLVITPELSLIGYPPKDLLFNPRLFE 60 Query: 65 ACSSAIDTLKSDTHDG--GAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLP 118 A++ L + +++G + + NSVV+L+ G V K LP Sbjct: 61 EEKDALNKLSKRLSNLSQNLSVLIGIAEPTPDIEIPKLYNSVVLLEKGTWRIVARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNSN----------ICKHLK 164 Y F EKR F S ++ + F ++GI ICEDIW N K L+ Sbjct: 121 TYDVFDEKRYFRSAENSSILSFNFQKKLWKIGITICEDIWVEQNLQNEKILGKDPLKFLE 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASP+ +K R I + P+IYVNQVGG DELIFDG+SF + Sbjct: 181 NEKLDLLINLSASPFIESKSLIRQRIAAKAAMRLSCPVIYVNQVGGNDELIFDGSSFAIN 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 + +L ++ F E + + S + +E + A VL ++ Sbjct: 241 KEGELKQELPSFKESVGLCDIS----------SLKQQPSILSKYPTSQEVIFRALVLGVK 290 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K NFH +IGLSGGIDSAL A IAV ALG V I++P ++S S++DA A Sbjct: 291 DYARKCNFHSAVIGLSGGIDSALVATIAVAALGISKVHAILMPSPWSSAGSVKDATTLAN 350 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + +PI D++N F ++S + P GI AEN+QSRIRG ILMA++N K +LL+ Sbjct: 351 RLGINHQKIPISDVMNSFNDVLSNSIWGIPIGITAENLQSRIRGTILMAIANQKKYLLLS 410 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF L W +S +S L E+ Sbjct: 411 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTSVFDLCDWIDSESSSSCRNDFSLPEKGEI 470 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYV 518 I I +K PSAELRP Q D +SLP Y ILD I+K ++E + ++ ++ + V V Sbjct: 471 ISSEIRDKPPSAELRPEQLDSDSLPEYSILDQILKGLIEQHLPTEVLIEKGFDKKIVHKV 530 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +LL +E+KR QAP KI+ ++FG PI++ Sbjct: 531 ANLLKNAEFKRYQAPPLLKISNQAFGSGWKKPIASG 566 >gi|78184072|ref|YP_376507.1| NAD+ synthase [Synechococcus sp. CC9902] gi|78168366|gb|ABB25463.1| NAD+ synthase [Synechococcus sp. CC9902] Length = 558 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 202/571 (35%), Positives = 303/571 (53%), Gaps = 34/571 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD+ GN + A EA R G D++L EL + GYPP DL+ + + I Sbjct: 1 MRLALAQINPLVGDLQGNAERILVAASEAQRDGADVLLTPELSLWGYPPRDLLLQPARIA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLPNY 120 A + + + D ++VG + G+ NS+ ++D AV K LP+Y Sbjct: 61 AQAELLQWMSQQL-DSDLIVLVGVALPTDDDRAPGLTNSIALVDRRGWRAVAHKQLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVF-RDIRLGILICEDIWKN----------SNICKHLKKQGAE 169 F E+R F G + + RLG+ ICED+W + + + L + + Sbjct: 120 DVFDERRYFRPGTGPNLLQLPNGQRLGLTICEDLWVDDNLQRERLAGPDPIEQLISEQPD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L ASP+ +K R ++ ++ P++Y+NQVGG DEL+FDG SF Sbjct: 180 VVINLAASPFDADKPLLRQKLAATAARRLNCPVVYLNQVGGNDELVFDGGSFVMSASGDP 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 ++ +Q + + + P + + A VL +RDY +K Sbjct: 240 LLELPCCCDQVSLWDSEAEPANRDQG------------PDDPLDRLFRALVLGVRDYARK 287 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F K ++GLSGGIDS L A IA ALG + V T+++P ++S S++DA A AK LG K Sbjct: 288 CGFQKALLGLSGGIDSGLVAVIATAALGADQVSTLLMPSPWSSAGSIDDAIALAKRLGLK 347 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 LPI L++ F + ++ L +P+G+ AEN+QSRIRG +LMA++N +LLTT NKS Sbjct: 348 TTTLPIRPLMDGFDTTLNPALGADPNGVTAENLQSRIRGTLLMAVANQEGQLLLTTGNKS 407 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEVIPPSI 464 E++VGY TLYGDM+GG + DLYKT VF L W +S L E++ +I Sbjct: 408 ELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWLDSPASRHCRGDYHLPEHGELVGDAI 467 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINNDQEYNDETVRYVEHLLY 523 K PSAELRP Q D +SLP Y LD ++K ++ E +N V VE LL Sbjct: 468 RRKPPSAELRPDQKDSDSLPDYSALDALLKDLIQERRHGEDLIAAGHNPALVSRVEQLLK 527 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +E+KRRQA K++ ++FG PI+ Sbjct: 528 RAEFKRRQAAPLLKVSPQAFGSGWRLPIACG 558 >gi|33241048|ref|NP_875990.1| NAD synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238577|gb|AAQ00643.1| NAD synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 564 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 205/575 (35%), Positives = 315/575 (54%), Gaps = 38/575 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++++AQLNP++GD++GN K A ++A + +L++ EL I GYPP DL+F F++ Sbjct: 1 MRLSLAQLNPLIGDLSGNSKKIIAACKDAYKNNANLLITPELSILGYPPRDLLFNPLFLE 60 Query: 65 ACSSAIDTLKSDTHDG--GAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLP 118 +D + + + ++VG Q+ + NS+ +L + + K LP Sbjct: 61 HQWDILDEIVTYIAEKTPQLTLLVGIAEPAQDLQVPNLFNSIALLKSSGWEVIARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIW----------KNSNICKHLK 164 Y F EKR F + + I+ R RLG+ ICED+W + + L Sbjct: 121 TYDVFDEKRYFRAAQKSGVILLTENERTWRLGLTICEDLWVEEGIQGHRIEGPDPIADLT 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASP+ H K R + + ++ P+IY+NQVGG DELIFDG+SF D Sbjct: 181 SKKIDLLLNLSASPFTHGKGLLRQRLASKAAKRLNCPVIYLNQVGGNDELIFDGSSFITD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 + + + E + + +S + D +E A VL ++ Sbjct: 241 QKGKKTLSLPLCKESIVTWDATSNSSISSPSLKED------------QEILLQALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DYV K F V++GLSGGIDSAL A IA ALG E V I++P ++S S+ DA AK Sbjct: 289 DYVGKCGFKSVLLGLSGGIDSALVAIIACAALGAEKVSGILMPSPWSSEGSIIDANNLAK 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG K +PI L+ ++ + L + P G+ AEN+Q+RIRG +LMA++N K +LL+ Sbjct: 349 RLGIKTSTIPIASLMENYDITLKTTLGKLPQGLTAENLQARIRGTLLMAIANEQKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEV 459 T NKSE++VGY TLYGDM+GG + DLYKT +F L W +S+ GL ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLAVIGDLYKTNIFDLCHWLDSNNAYQCRSDLGLPKTGDL 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETVRYV 518 + +IL K PSAEL P+Q D +SLP Y +LD I+K ++E+ ++ +EY V V Sbjct: 469 VGSAILNKPPSAELSPNQLDSDSLPDYEVLDKILKALIEDRSNYKTLASKEYPSALVTKV 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + LL +E+KRRQAP K++ ++FG PI++ Sbjct: 529 KKLLKNAEFKRRQAPPTLKVSEQAFGSGWRIPIAS 563 >gi|72382815|ref|YP_292170.1| NAD+ synthase [Prochlorococcus marinus str. NATL2A] gi|72002665|gb|AAZ58467.1| NAD+ synthase [Prochlorococcus marinus str. NATL2A] Length = 569 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 219/576 (38%), Positives = 317/576 (55%), Gaps = 36/576 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+AQLNPV+GD+ GN K EE + +DL++ EL + GYPP+DL+F + Sbjct: 1 MKLALAQLNPVIGDLDGNSKKIFEICEEIKDKDVDLVITPELSLIGYPPKDLLFNPRLFE 60 Query: 65 ACSSAIDTLKSDTHDG--GAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLP 118 ++ L + +++G + + NSVV+L+ G V K LP Sbjct: 61 EEKDVLNKLSKRLSNLSQNLSVLIGIAEPTPDIEIPKLYNSVVLLEKGTWRIVARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNSN----------ICKHLK 164 Y F EKR F S ++ + F ++GI ICEDIW N K L+ Sbjct: 121 TYDVFDEKRYFRSAENSSILSFNFQKKLWKIGITICEDIWVEQNLQNEKILGKDPLKLLE 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASP+ +K R I + P+IYVNQVGG DELIFDG+SF + Sbjct: 181 NEKLDLLINLSASPFIESKSLIRQRIAAKAAIRLSCPVIYVNQVGGNDELIFDGSSFALN 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 + +L ++ F E + + AS + +E + A VL ++ Sbjct: 241 KEGELKQELPSFKESVGLCDIS----------SLKQQASILSKYPTSQEVIFRALVLGVK 290 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K NFH +IGLSGGIDSAL A IAV ALG V I++P ++S S++DA A Sbjct: 291 DYARKCNFHSAVIGLSGGIDSALVATIAVAALGISKVHAILMPSPWSSAGSVKDATTLAN 350 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + +PI D++N F ++S + P+GI AEN+QSRIRG ILMA++N K +LL+ Sbjct: 351 RLGINHQKIPISDVMNSFNDILSNSIWGMPTGITAENLQSRIRGTILMAIANQKKHLLLS 410 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF L W +S +S L E+ Sbjct: 411 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTSVFDLCDWIDSESSSSCRNDFSLPEKGEI 470 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF-INNDQEYNDETVRYV 518 I I +K PSAELRP Q D +SLP Y ILD I+K ++E + ++ ++ + V V Sbjct: 471 ISSEIRDKPPSAELRPEQLDSDSLPEYSILDQILKGLIEQHLPTEVLIEKGFDKKIVHKV 530 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +LL +E+KR QAP KI+ ++FG PI++ Sbjct: 531 ANLLKNAEFKRYQAPPLLKISNQAFGSGWKKPIASG 566 >gi|116071296|ref|ZP_01468565.1| NAD+ synthase [Synechococcus sp. BL107] gi|116066701|gb|EAU72458.1| NAD+ synthase [Synechococcus sp. BL107] Length = 558 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 205/571 (35%), Positives = 309/571 (54%), Gaps = 34/571 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD+ GN + A EA R G D++L EL + GYPP DL+ + I Sbjct: 1 MRLALAQINPLVGDLQGNAERILVAASEAQRDGADVLLTPELSLWGYPPRDLLLQPDRIA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLPNY 120 A + + + D ++VG + G+ NS+ ++D AV K LP+Y Sbjct: 61 AQAELLQGMSQHL-DSDLIVLVGVALPTDDDRAPGLTNSIALVDRRGWRAVAHKQLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVF-RDIRLGILICEDIWKN----------SNICKHLKKQGAE 169 F E+R F G + + RLG+ ICED+W + + + L + + Sbjct: 120 DVFDERRYFRPGTGPNLLQLPNGQRLGLTICEDLWVDDNLQRERLAGPDPIEQLIPEQPD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L ASP+ +K R ++ ++ P++Y+NQVGG DEL+FDG SF Sbjct: 180 VVINLAASPFDADKPLLRQKLAATAARRLNCPVVYLNQVGGNDELVFDGGSFVMSASGDP 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 ++ +Q ++ W + + + ++ DD + + A VL ++DY K Sbjct: 240 LLELPCCCDQ--VSLWDSEAEPANRDHSPDDPLDRL----------FRALVLGVQDYACK 287 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F K ++GLSGGIDS L A IA ALG ++V T+++P ++S S++DA A AK LG K Sbjct: 288 CGFQKALLGLSGGIDSGLVAVIATAALGADHVSTLLMPSPWSSAGSIDDAVALAKRLGLK 347 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 LPI L++ F + ++ L +PSG+ AEN+QSRIRG +LMA++N +LLTT NKS Sbjct: 348 TTTLPIRPLMDGFDTTLNPALGADPSGVTAENLQSRIRGTLLMAVANQEGQLLLTTGNKS 407 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG-----LGPLTEVIPPSI 464 E++VGY TLYGDM+GG + DLYKT VF L W +S L E++ +I Sbjct: 408 ELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWLDSPASRHCRGDYHLPEHGELVGDAI 467 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIV-ENEESFINNDQEYNDETVRYVEHLLY 523 K PSAELRP Q D +SLP Y LD ++K ++ E +N E V VE LL Sbjct: 468 RRKPPSAELRPDQKDSDSLPDYSALDALLKDLIQERRHGEDLIAAGHNPELVSRVEQLLK 527 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +E+KRRQA K++ ++FG PI+ Sbjct: 528 RAEFKRRQAAPLLKVSPQAFGSGWRLPIACG 558 >gi|86741832|ref|YP_482232.1| NH(3)-dependent NAD(+) synthetase [Frankia sp. CcI3] gi|86568694|gb|ABD12503.1| NH(3)-dependent NAD(+) synthetase [Frankia sp. CcI3] Length = 606 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 208/608 (34%), Positives = 306/608 (50%), Gaps = 56/608 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +L+IA+AQ++ VGD+AGN + A G LI F EL ++GYPPEDLV ++S Sbjct: 1 MAQLRIALAQVDTTVGDLAGNADLVSTWTKRAVADGAHLIAFGELTLTGYPPEDLVLRRS 60 Query: 62 FIQACSSAIDTLKSDTHDGG---AGIVVGF----------PRQDQEGVLNSVVILDAGNI 108 F+ A A+ L + G +VVG+ + N+ +L G + Sbjct: 61 FVAASQRALVALARRLAEEGCGEIAVVVGYLDASAQPAPNVGRPAGEPQNAAAVLWGGEV 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 +A K +LPNY F E R F+ G + + I +G+ ICED+W+ ++ G Sbjct: 121 VARYAKHHLPNYGVFDEFRYFVPGMAFPVLRLHGIDVGLTICEDLWQQGGPITVARRSGV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + +N SPY K +R + + + YVN VGGQDEL+FDG S D + Sbjct: 181 GLVLCINGSPYEQGKSFQRDALCAERAREAAAALAYVNLVGGQDELVFDGDSLVVDAAGE 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLS------------------------------------ 252 L + FSE +T+ S Sbjct: 241 LVARAPVFSEALLITDLDLPAAGSGPARAVSGAVDAGAVDAGAVDAEDGTTMTVTRTVLA 300 Query: 253 -QWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 + + + Y A V + RDY++KN F V +GLSGGIDSAL A I Sbjct: 301 AEPLAPFAPLPPVVADRPEPAGELYTALVTATRDYIRKNGFSSVALGLSGGIDSALVATI 360 Query: 312 AVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 AVDA+G + V T+ LP Y+S S+ DAA A+ G ++ V+PI + F + + Sbjct: 361 AVDAIGADAVHTVALPSGYSSGHSVTDAAELARRQGTRHAVVPIEPIAAAFRAAAAALGG 420 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 EN+Q+R+RG +LMALSN ++LTT NKSE++ G+ TLYGD +GG+ P+KD Sbjct: 421 LHGL--ADENLQARVRGTLLMALSNQHGHLILTTGNKSELATGFSTLYGDSAGGYAPIKD 478 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 + KT+V+ LA WRN+ G P IP I+ K+PSAEL P Q D + LP Y ILD Sbjct: 479 VSKTRVWGLARWRNAAAEKRGEVP---PIPEEIIVKAPSAELAPGQLDSDRLPDYGILDP 535 Query: 492 IIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 ++ V ++ ++ V V L+ +EYKRRQ P G K+T+K+FGRDR P Sbjct: 536 VLDDYVSHDRGRAELIAAGHDPAVVDKVIRLVDLAEYKRRQNPPGPKVTSKAFGRDRRLP 595 Query: 551 ISNKFRDH 558 I++++R++ Sbjct: 596 ITSRWREN 603 >gi|33865038|ref|NP_896597.1| putative glutamine dependent NAD(+) synthetase [Synechococcus sp. WH 8102] gi|33638722|emb|CAE07017.1| putative glutamine dependent NAD(+) synthetase [Synechococcus sp. WH 8102] Length = 568 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 200/571 (35%), Positives = 300/571 (52%), Gaps = 32/571 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQLNPVVGD+ GN + A A+ +G L+L EL + GYPP DL+ + + + Sbjct: 1 MRLALAQLNPVVGDLRGNAERILAAARSASAEGATLLLTPELSLWGYPPRDLLLQPARLA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLPNY 120 S+ +D L DG ++VG + G+ N + ++D G V K LP+Y Sbjct: 61 LQSAVLDGLVEQL-DGLCSLLVGVALPCDDDRAPGLYNGIALVDQGGWRGVARKQLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVFR-DIRLGILICEDIWKN----------SNICKHLKKQGAE 169 F E+R F G + RLG+ ICED+W + L + + Sbjct: 120 DVFDERRYFRPGDGPCLLTLEEGERLGLTICEDLWVEDALQRERLAGPDPIAALVEAKPD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 L +L ASP+ +K R ++ ++ P++Y+NQVGG DEL+FDG+S Sbjct: 180 LLINLAASPFDPSKPALRRQLAGQAARRLNCPVVYLNQVGGNDELVFDGSSLVVAPDGST 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 ++ E + + + + + + EE A VL +RDY K Sbjct: 240 LLELPACREAVQVWD----------SSGPQQATAPLSQTPCREELLLRALVLGVRDYAGK 289 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F + ++GLSGGIDSAL A IA ALG EN+ +++P ++S S+ DA A A L K Sbjct: 290 CGFQRALLGLSGGIDSALVAVIAAAALGPENISALLMPSPWSSSGSINDATALANRLNIK 349 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 LPI L+ F + ++ L ++P G+ AEN+QSRIRG +LMA++N +LLTT NKS Sbjct: 350 THTLPIQGLMQGFDTSLTPALGQQPQGVTAENLQSRIRGTLLMAVANQQGQLLLTTGNKS 409 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVIPPSI 464 E++VGY TLYGDM+GG + DLYKT VF L W +S + GL E++ +I Sbjct: 410 ELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWIDSPEARNCREDLGLPQQGELVGEAI 469 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLY 523 K PSAELRP Q D +SLP Y LD ++K +++ + ++ V V+ LL Sbjct: 470 RRKPPSAELRPDQKDSDSLPDYSELDPLLKGLIQERTTPQALVAAGHDIPLVERVQRLLQ 529 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +E+KRRQA K++ ++FG PI+ Sbjct: 530 RAEFKRRQAAPLLKVSPQAFGSGWRLPIAAG 560 >gi|297569897|ref|YP_003691241.1| NAD+ synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925812|gb|ADH86622.1| NAD+ synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 569 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 203/576 (35%), Positives = 296/576 (51%), Gaps = 33/576 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+ Q+NP +GD N A G +L + EL ISGYPPEDL+ + F+ Sbjct: 1 MKLALIQINPRIGDFRHNTEVIIDRCRRAANLGCELAVLPELAISGYPPEDLLERPDFLA 60 Query: 65 ACSSAIDTLKSDTHDGGA--GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A++ L + G G ++ P + + N+ ++ G I+A K LP Y Sbjct: 61 HHQRALERLLKEIRGIGVLCGAIIPNPAPTGKPLHNAALLFADGEILATTTKRLLPTYDV 120 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKN----------SNICKHL-----KKQG 167 F E R F G I F+ +RL I ICED+W + + L + G Sbjct: 121 FGESRYFEPGPPGKIIEFQGLRLAITICEDVWNHVIFTPHRPYHHDPVAELLGPPAARSG 180 Query: 168 -----AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 A+ L ++ ASP+ K +R +I +P+++VNQVGGQD LIFDG S Sbjct: 181 NTPAPADLLVNIAASPFESGKTARREQIFQTISRRYQIPLVFVNQVGGQDSLIFDGDSLA 240 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 ++ ++ + F E + + S + E A VL Sbjct: 241 YNTDGRVICRAARFQEDLTVFALPQASGPGEETAPSAGANLPGADHDLEAAEILAALVLG 300 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 D+V+K F + I+GLSGG+DSAL A IA ALG V + LP Y++P S EDA A Sbjct: 301 TGDFVRKCGFSQTILGLSGGLDSALTAVIAAQALGPAKVLGLALPSAYSAPASQEDARAL 360 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAM 401 A LG Y+VLPI ++ + ++ L ++ G+V +N+Q+RIRGN+LMA SN S + Sbjct: 361 AANLGLAYEVLPIDQVLAAYRPALAPLLGDQSWPGLVEQNLQARIRGNLLMAESNRSGRL 420 Query: 402 LLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIP 461 LL T NKSE++VGY TLYGDM G L D+ KT V++LA N E+IP Sbjct: 421 LLNTGNKSELAVGYCTLYGDMCGALAVLADVPKTMVYRLAKLVNREE---------EIIP 471 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENE-ESFINNDQEYNDETVRYVEH 520 +E+ PSAEL P Q D + LPPY +LD I++ +E + E+ + Y V V Sbjct: 472 RRTIERPPSAELAPGQRDDDELPPYEVLDPILQAYLEEQLEAAAIIQRGYPATVVNEVIE 531 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ +E+KRRQAP G KI+ K+FG RLYP++ ++ Sbjct: 532 RIHRNEHKRRQAPPGLKISGKAFGAGRLYPLTANYQ 567 >gi|297620461|ref|YP_003708598.1| putative glutamine-dependent NAD(+) synthetase [Waddlia chondrophila WSU 86-1044] gi|297375762|gb|ADI37592.1| putative glutamine-dependent NAD(+) synthetase [Waddlia chondrophila WSU 86-1044] Length = 544 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 189/567 (33%), Positives = 296/567 (52%), Gaps = 40/567 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ IAQ+NP VGD+ GN +A L+LF EL +SGYPP+D + F + Sbjct: 1 MRVLIAQINPTVGDLEGNCQLILDGIAKAKSLKAHLVLFPELALSGYPPDDFLLLSDFTE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVL----NSVVILDAGNIIAVRDKINLPNY 120 A ++ + + G ++VG P+ + +G NS I+ +I ++DK LP Y Sbjct: 61 AIDRYLEKIVEASK--GIAVIVGTPKMNPQGRHLKLCNSAAIIHDQTLIGLQDKSLLPTY 118 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAEF 170 F E R F ++G+ ICEDIW+++ + L Q + Sbjct: 119 DVFDELRYFEPAAKTFVWQLCGKKIGVTICEDIWQHTPAARETSYHRDPVEDLAAQSPDL 178 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLA 230 L +L+ASP+ + +R E + P++ NQVGG D LIFDG S +G +L Sbjct: 179 LINLSASPFRRGRSLERIETCQAIAKTLKCPVLLCNQVGGNDSLIFDGRSVAVNGDAELI 238 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKN 290 K F E + + Y + + + E A VL LRDY +K Sbjct: 239 DLAKGFEEDFLLVDLSY-------------PSEEISHDVDHTEELRKALVLGLRDYFRKQ 285 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F K +G+SGGIDSA+ AA+AV+ALGKENV +++P ++TS +S+EDA K LG + Sbjct: 286 GFSKACLGISGGIDSAVVAALAVEALGKENVLGVLMPSRFTSKRSIEDARQLVKNLGIDH 345 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I + + L+ + + + EN+Q+R+RG ILMALSN ++L+T NKSE Sbjct: 346 REISIEEPFQCYLDLLQPHFEGKQPDVTEENLQARVRGMILMALSNKHGYIVLSTGNKSE 405 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++GY TLYGD GG + D+ K V+ LA N+ EVIP +I++++PS Sbjct: 406 LAMGYATLYGDTVGGMAVISDVAKMDVYALAESYNAEE---------EVIPQTIIDRAPS 456 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEE--SFINNDQEYNDETVRYVEHLLYGSEYK 528 AELR Q D +SLP Y ++D ++K VE I + +Y + V+ + ++ +EYK Sbjct: 457 AELREGQLDSDSLPDYEVIDTVVKAYVEEHMCPQAIADKFDYPIDLVKDLIGRVHCNEYK 516 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 RRQ G ++++++F R +PI K+ Sbjct: 517 RRQMAPGLRVSSRAFTIGRRFPIVQKW 543 >gi|78213695|ref|YP_382474.1| NH(3)-dependent NAD(+) synthetase [Synechococcus sp. CC9605] gi|78198154|gb|ABB35919.1| NAD+ synthetase [Synechococcus sp. CC9605] Length = 561 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 199/571 (34%), Positives = 304/571 (53%), Gaps = 31/571 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQLNPVVGD GN + A A Q ++L+L EL + GYPP D + + S IQ Sbjct: 1 MRIALAQLNPVVGDFEGNAKRILEAVRRAEEQAVELVLTPELSLWGYPPRDQLLEPSRIQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLPNY 120 + + L + + ++VG + + N VV+++ + K LP+Y Sbjct: 61 QQDTMLQWLVNQL-NSSVTLLVGAALPASDARSPRLHNGVVLVNRLGWRPIAQKQLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVF-RDIRLGILICEDIWKN----------SNICKHLKKQGAE 169 F E+R F G+ + RLG+ ICED+W + + L + + Sbjct: 120 DVFDERRYFRPGHGPCLLSLPNGKRLGLTICEDLWVDDGLQRERLDGPDPIDQLVPEQPD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L ASP+ K R ++ ++ P+IY+NQVGG DEL+FDGASF + Sbjct: 180 LVINLAASPFDAAKPALRQQLAAAAAQRLNCPLIYLNQVGGNDELVFDGASFVVGADGAV 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 ++ E + + + + + P+ E + A VL +RDY +K Sbjct: 240 QLELPVCEEHLAVWD---------SGHPTTVRSHGQIQPMDPIERLFRALVLGVRDYARK 290 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F + ++GLSGGIDSAL A IA ALG E V +++P ++S S++DA A A+ LG + Sbjct: 291 CGFKQALLGLSGGIDSALVAVIATAALGNEAVSALLMPSPWSSSGSIDDALALAERLGLQ 350 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + +PI L+ + ++ L +P G+ AEN+QSRIRG++LMA++N +LLTT NKS Sbjct: 351 TNTVPIAGLMEGYDQALTAPLGAKPQGVTAENLQSRIRGSLLMAVANQQGQLLLTTGNKS 410 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVIPPSI 464 E++VGY TLYGDM+GG + DLYKT VF L W +S GL E++ +I Sbjct: 411 ELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWLDSDAARGCRQALGLPTHGELVGEAI 470 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES-FINNDQEYNDETVRYVEHLLY 523 K PSAELRP+Q D +SLP Y LD ++K +++ +S ++ V VE LL Sbjct: 471 RRKPPSAELRPNQKDSDSLPDYDALDALLKALIQERQSGPTLVAAGHDPALVERVERLLK 530 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +E+KRRQA K++ ++FG PI+ Sbjct: 531 RAEFKRRQAAPLLKVSPQAFGSGWRLPIAAA 561 >gi|94264028|ref|ZP_01287828.1| NAD(+) synthase (glutamine-hydrolyzing) [delta proteobacterium MLMS-1] gi|93455539|gb|EAT05726.1| NAD(+) synthase (glutamine-hydrolyzing) [delta proteobacterium MLMS-1] Length = 581 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 212/584 (36%), Positives = 291/584 (49%), Gaps = 38/584 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q+NPV+GD A N K A G L + EL +SGYPP DL+ + +F Sbjct: 7 MKIALLQINPVIGDFAANARKIVDGCGRAAAAGCQLAILPELALSGYPPRDLLERPAFRA 66 Query: 65 ACSSAIDTLKSDTHDGGA--GIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A++ L D G G V P +G+ N+ ++ G I+A K LP Y Sbjct: 67 EHQRALEDLVRQITDIGVLCGAFVAHPEA-GKGLANAALLFAGGEILATVGKRLLPAYDV 125 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNS-----------------------NI 159 F E R F G P FR + LGI ICEDIW + Sbjct: 126 FDESRYFRPGPPVAPCRFRGVNLGITICEDIWNMEGAAVPPADPRGGLPPAYDCEPVREL 185 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 +QG + L ++ ASP+ K R E++ G + LP+ VNQVGGQD LIFDG Sbjct: 186 VAAAGEQGIDLLVNIAASPFTVGKDAFREELLAGIATRYRLPVALVNQVGGQDSLIFDGG 245 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEE--ADYN 277 S + + F+E + + + + S + Sbjct: 246 SLALAADGRPLVKAARFAEDLVVLDLDNKKNKKGSDPFSPGGGKKATEMGSDPFLAEIMA 305 Query: 278 ACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLE 337 A L RDYV K F +V+IGLSGG+DSAL AAIA ALG E V + +P Y++ SLE Sbjct: 306 ALELGTRDYVHKCGFGRVVIGLSGGLDSALTAAIAARALGPEQVLGVAMPSPYSAAASLE 365 Query: 338 DAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNH 397 DA A A LG ++ LPI + F + ++ L E + +N+Q+RIRGN+LMA++N Sbjct: 366 DARALAVNLGIEFAELPIATARDTFLTTLAPLLGEVSGELTDQNLQARIRGNLLMAIANQ 425 Query: 398 SKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLT 457 +LL T NKSE++VGY TLYGDM G L D+YKT V+ LA W N Sbjct: 426 QGRLLLATGNKSELAVGYCTLYGDMCGALAVLADVYKTVVYDLAGWLNRK---------R 476 Query: 458 EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVR 516 E+IP +E+ PSAEL P Q D + LPPY ILD I++ +E + Q + V Sbjct: 477 ELIPARTIERPPSAELAPEQRDDDELPPYEILDPILQAHLEEQLPATAIVQRGHEPAVVA 536 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDHIS 560 V + + +EYKR+QAP KITAK+FG YPI+ + + I+ Sbjct: 537 DVINRVRLNEYKRQQAPPALKITAKAFGPGWRYPIAANYSERIN 580 >gi|113955214|ref|YP_731491.1| NAD+ synthetase [Synechococcus sp. CC9311] gi|113882565|gb|ABI47523.1| NAD+ synthetase [Synechococcus sp. CC9311] Length = 573 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 206/580 (35%), Positives = 310/580 (53%), Gaps = 37/580 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAR----EEANRQGMDLILFTELFISGYPPEDLVFKK 60 ++IA+AQ NP+VGD++ N + A ++A+ L++ EL + GYPP DL+ Sbjct: 1 MRIALAQTNPLVGDLSRNAKRLVEACLEISDQAHNTPPALVVSPELSLWGYPPRDLLLSP 60 Query: 61 SFIQACSSAIDTLKS-DTHDGG-----AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDK 114 + +Q S A++ L+ +H G+V P Q + N+ +++A V K Sbjct: 61 AHLQQQSEALNQLQQGLSHALPQTALLVGVVEPAPDQQHPRLFNAAALVEANGWRVVARK 120 Query: 115 INLPNYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKN----------SNIC 160 LP Y F E R F + F+ D RLG+ ICED+W + Sbjct: 121 QLLPTYDVFDESRYFRPANQASVLSFKAEGQDWRLGLTICEDLWVEDALQAQRLVGPDPI 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGAS 220 +L + + L +L+ASP+ K RH++ + P++YVNQVGG DEL+FDG S Sbjct: 181 ANLIPEQVDVLLNLSASPFGRTKASIRHQLAARAAQRLDCPVVYVNQVGGNDELVFDGGS 240 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 F ++ Q+ E S + + +T + E + A V Sbjct: 241 FVMAANGEVELQLPTCREAIA-------CWDSTYRSSAATVGTTYPSEGADLEQLFQALV 293 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 L +RDYV K F + ++GLSGGIDSAL A IA ALG + VQ +++P ++S S++DA Sbjct: 294 LGVRDYVSKCGFQRALLGLSGGIDSALVAVIAAAALGADRVQALLMPSPWSSIGSIDDAE 353 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A AK L LPI DL+ F + ++ L++ PSG+ AEN+QSRIRG +LMA++N Sbjct: 354 ALAKRLRISTSTLPIQDLMQGFEATLTPALEQAPSGVTAENLQSRIRGTLLMAVANQQGQ 413 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGP 455 +LL+T NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + GL Sbjct: 414 LLLSTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFSLCRWLDSPDSKTSRKALGLPV 473 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDET 514 ++I IL K PSAELRP+Q D +SLP Y LD ++K ++E S ++ Sbjct: 474 HNDLIGLEILNKPPSAELRPNQQDSDSLPDYSTLDPLLKDLIEKHSSGTQLIAAGHDPAD 533 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 V+ +E L +E+KRRQAP K++ ++FG PI+++ Sbjct: 534 VQRIEQLFRRAEFKRRQAPPVLKVSRQAFGTGWRLPIASR 573 >gi|288962507|ref|YP_003452802.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] gi|288914773|dbj|BAI76258.1| NAD+ synthase (glutamine-hydrolyzing) [Azospirillum sp. B510] Length = 571 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 211/567 (37%), Positives = 295/567 (52%), Gaps = 16/567 (2%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 L+I Q NP VG + GN R + E R DL++F+E F +GYP +DLV + Sbjct: 6 STTLRIVCVQANPTVGALRGNFD-IVRRKREQYRGKADLLVFSECFGTGYPLQDLVLRPG 64 Query: 62 FIQACSSAIDTLKSDTH-DGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F + +A+D L + DGG +++G P N+ +++ + + K LPN Sbjct: 65 FRRDFRTALDALAAGMRGDGGPAVLIGGPLDGAALPYNAAFLIETDGSMRILLKHILPND 124 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 + EKR F G P+ FR RLGI ICED W + + + L +GA+ L N S + Sbjct: 125 EVYDEKRVFAPGPMPSPVDFRGFRLGIAICEDFW-HGKVAQALAAEGADVLIVPNGSHFR 183 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R I + LP++YVNQ+GGQD L+FDG S+ D + Q F E + Sbjct: 184 SGKQAVRLAIGRRTVKATGLPVLYVNQIGGQDSLVFDGGSYVMDRAGLVIAQ-AGFQECD 242 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + D E EA Y A VL LRDYV KN F V++G+S Sbjct: 243 LDITLERGEGGGVDPRRGDVLGMPPNSYPDEPEAMYRALVLGLRDYVDKNGFPGVVLGMS 302 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDSAL AA+AVDALG + V + +P +TS S+EDA A LG + +PI + Sbjct: 303 GGIDSALSAAVAVDALGADRVLPVRMPSPHTSAASMEDAERAAALLGTRLLTVPIAPAME 362 Query: 361 HFFSLMSQFLQE----EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 F +++ + P ENIQ+R RG LMALSN M+L+T NKSE+SVGY Sbjct: 363 AFDRMLAPVFADLPPAAPDDTSFENIQARARGMTLMALSNRLGLMVLSTGNKSEMSVGYA 422 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 TLYGDM GG++ LKD+YKT VF LA WRN+H LGP V+P I+ K PSAELR Sbjct: 423 TLYGDMCGGYSVLKDVYKTVVFALARWRNTHVPAGLLGPHGAVMPDRIITKPPSAELRAG 482 Query: 477 QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYVEHLLYGSEYK 528 QTD+++L Y LD ++ +VE E + Q + + ++YK Sbjct: 483 QTDEQALGAYEHLDAVLATMVEGLNGADRAAELAGAAVGQPIPTAYAERIGRMTARAQYK 542 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNKF 555 R Q+P G +T +++G P++N + Sbjct: 543 RDQSPPGVVVTERTYGPGWRLPVTNHY 569 >gi|87125423|ref|ZP_01081269.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. RS9917] gi|86167192|gb|EAQ68453.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. RS9917] Length = 585 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 211/584 (36%), Positives = 312/584 (53%), Gaps = 35/584 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANR--QGMDLILFTELFISGYPPEDLVFKKSF 62 ++IA+AQ+NP+VGD+ GN A+ A +++ + + DL+L EL + GYPP DL+ + Sbjct: 1 MRIALAQINPLVGDLPGNAARILAACQQSQQQSEPADLLLTPELSLWGYPPRDLLLNPTG 60 Query: 63 IQACSSAIDTLKSDTHDGG--AGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKIN 116 + + +D L D HD ++VG + + N+V ++ AG V K Sbjct: 61 VAQQQTVMDHLSQDLHDLAPALAVLVGVVEPAGDSALPHLFNAVALIQAGRWRVVGRKQL 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNS----------NICKH 162 LP+Y F E R F + + + RLG+ ICED+W + Sbjct: 121 LPSYDVFDESRYFRAASGPSCLTLNLAGQPWRLGLTICEDLWVEPALQNQRLTGPDPVAA 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L+ G + L +L+ASP+ K R E+ + ++ P+IYVNQVGG DELIFDG SF Sbjct: 181 LEPLGVDLLLNLSASPFAQEKSPLRRELAARAAARLNCPVIYVNQVGGNDELIFDGGSFV 240 Query: 223 FDGQQQ-------LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD 275 D +Q L Q+ E + + S+ N + + + EE Sbjct: 241 IDRPRQEGQAVPTLTLQLPICKEALDLWDAGSTAAASELNPKGAAAIRPDHHAMSREEQL 300 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQS 335 A VL + DY K F + ++GLSGGIDSAL A IA ALG + VQ +++P ++S S Sbjct: 301 LRALVLGVHDYAGKCGFQRALLGLSGGIDSALVAVIACAALGADRVQALLMPSPWSSRGS 360 Query: 336 LEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALS 395 +EDAAA A LG D PI L++ F + ++ LQ P+ + AEN+QSRIRG +LMA++ Sbjct: 361 IEDAAALAHRLGLHTDTTPIEALMDSFAATLTPVLQGPPADVTAENLQSRIRGTLLMAVA 420 Query: 396 NHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS---- 451 N +LL+T NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + Sbjct: 421 NQQGQLLLSTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFALCDWLDSPASQTCRRD 480 Query: 452 -GLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQE 509 GL E++ I EK PSAELRP Q D +SLP Y +LD +++ ++E + Sbjct: 481 LGLPTNGELVGRPIREKPPSAELRPDQKDSDSLPDYAVLDPLLRDLIEEHCGEEALLQRG 540 Query: 510 YNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + ET+ V L +E+KRRQAP K++ ++FG PI+ Sbjct: 541 HAPETITRVLRLFRRAEFKRRQAPPLLKVSRQAFGTGWRLPIAA 584 >gi|238918827|ref|YP_002932341.1| NAD synthetase [Edwardsiella ictaluri 93-146] gi|238868395|gb|ACR68106.1| glutamine-dependent NAD(+)(+) [Edwardsiella ictaluri 93-146] Length = 457 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 203/470 (43%), Positives = 283/470 (60%), Gaps = 20/470 (4%) Query: 87 GFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLG 146 G P +D + + N++ + G ++A K LPNY F EKR F +G + + + RLG Sbjct: 2 GHPWRDGDCLYNALSVFAEGRLLARYYKQRLPNYGVFDEKRYFSAGDTPCTVTLKGYRLG 61 Query: 147 ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 +LICED+W ++ L GAE L ++NASPY K R+ ++ LP++Y+N Sbjct: 62 LLICEDVWFDA-PVDALAAAGAEVLLTINASPYNREKPYMRNTLLADHCRRTGLPLLYLN 120 Query: 207 QVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 QVGGQDEL+FDG S FD L ++ FSEQ D +L + + Sbjct: 121 QVGGQDELVFDGCSKAFDASGVLTHRLAAFSEQVTQVRLD-DGRLLPMTSPAAELPPLAQ 179 Query: 267 IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 I Y A VL++RDYV KN F ++GLSGGIDSAL AIAVDALGKE VQ +M+ Sbjct: 180 I--------YQALVLAVRDYVGKNGFQGAVLGLSGGIDSALTLAIAVDALGKERVQAVMM 231 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P++YT+ S+ DA A +G ++D+L I + + F ++ EN+Q+R Sbjct: 232 PFRYTADISVADAREQALTMGVEFDILSIEPMFDAFMGQLAPMFAGTERDTTEENLQARC 291 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMALSN + ++LTT NKSE++VGY TLYGDM+GGF+ LKD+ KT VFQLA +RN+ Sbjct: 292 RGVVLMALSNKRRRLVLTTGNKSEMAVGYATLYGDMAGGFDVLKDVPKTLVFQLARYRNT 351 Query: 447 HGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN 506 LT VIP ++++ PSAEL P Q DQ+SLPPY ILD I++ VE + S Sbjct: 352 ---------LTPVIPQRVIDRPPSAELAPDQIDQDSLPPYDILDAILQGYVEQDRSVAQL 402 Query: 507 DQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 +++ VR V L+ +EYKRRQA VG +ITA++FG+DR YPI++ F Sbjct: 403 VADGFDEAVVRKVIRLVDINEYKRRQAAVGPRITARNFGKDRRYPITSGF 452 >gi|88807389|ref|ZP_01122901.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. WH 7805] gi|88788603|gb|EAR19758.1| Carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. WH 7805] Length = 579 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 211/579 (36%), Positives = 308/579 (53%), Gaps = 33/579 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQG---MDLILFTELFISGYPPEDLVFKKS 61 ++IA+AQ+NPVVGD+ GN + A + G DL++ EL + GYPP DL+F + Sbjct: 3 MRIALAQINPVVGDLLGNADRIHSALDATKVDGKTSADLLVTPELSLWGYPPRDLLFSTA 62 Query: 62 FIQACSSAIDTLKS--DTHDGGAGIVVGFPR----QDQEGVLNSVVILDAGNIIAVRDKI 115 ++ A+D L+ D A ++VG Q + N++ ++ A V K Sbjct: 63 HLEQQQQALDRLQQRLDAEQQDAALLVGMAEVASDQQHPRLYNAMALVQASGWNVVARKQ 122 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKN----------SNICK 161 LP+Y F E R F + S I R D RLG+ ICED+W + + Sbjct: 123 LLPSYDVFDETRYFRASCSPSTISLRVNNHDWRLGLTICEDLWVDQELQKRRLVGPDPIA 182 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + + L + +ASP+ K R ++ + + P++YVNQVGG DELIFDGASF Sbjct: 183 ALMHERIDALINCSASPFSRGKATLRRKLASRAAGRLQCPVVYVNQVGGNDELIFDGASF 242 Query: 222 CFDGQQQL-AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 + Q+ F + S+ N L+ + A V Sbjct: 243 VMAPGESTPQLQLPDFCVSTAVWTAQLPASPSEQNPHPHQHGQDQDAGLEAL---FRALV 299 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 + DY K F K ++GLSGGIDSAL A IA ALG E VQT+++P ++S S+EDA Sbjct: 300 TGVGDYATKCGFKKALLGLSGGIDSALVAVIAAAALGPEQVQTLLMPSPWSSSGSIEDAL 359 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A A LG ++PI L++ F + ++ L EPSGI AEN+QSRIRG +LMA++N Sbjct: 360 ALATRLGISSRIVPIQTLMDGFEATLTPALDAEPSGITAENLQSRIRGTLLMAMANQQGQ 419 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGP 455 +LL+T NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + GL Sbjct: 420 LLLSTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFALCHWLDSPDAGACRSELGLAF 479 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES-FINNDQEYNDET 514 +I +ILEK PSAELRP Q D ++LP Y +LD ++ ++E+ S + ++ + Sbjct: 480 DGPLIDRAILEKPPSAELRPDQKDSDALPDYGVLDPLLVDLIEHRMSGVQLINAGHDPDD 539 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 V +E L +E+KRRQAP K++ ++FG PI+ Sbjct: 540 VTRIERLFRRAEFKRRQAPPLLKVSNQAFGSGWRLPIAA 578 >gi|124022199|ref|YP_001016506.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9303] gi|123962485|gb|ABM77241.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9303] Length = 564 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 211/577 (36%), Positives = 313/577 (54%), Gaps = 40/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQLNP+VGD+AGN K A EA G DL+L EL + GYPP DL+ + + Sbjct: 1 MRLALAQLNPLVGDLAGNGEKILAACREAADLGADLVLTPELSLWGYPPRDLLLSHNHLV 60 Query: 65 ACSSAIDTLKSDTH--DGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLP 118 S ++ + S ++VG Q + + N++ ++ + V K LP Sbjct: 61 QQSDVLNQMASILAHEAPDLAVLVGLAEQAHDPQLPQLFNALALIKSSQWQVVARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKN----------SNICKHLK 164 Y F EKR F + + F R RLG+ ICED+W + L Sbjct: 121 TYDVFDEKRYFRPAGTPAVLEFERDGRRWRLGLTICEDLWVEEALQGKRIAGPDPIAALL 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 Q + L +L+ASP+ +K R + + P+IYVNQVGG DEL+FDGASF D Sbjct: 181 PQNIDLLLNLSASPFSQSKELLRQRLAARAAQRLSAPVIYVNQVGGNDELVFDGASFVVD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSL 283 +LA Q+ E + + +A+ + +P E + A VL + Sbjct: 241 EHAELALQLPSCRESVAIWDAT-------------STATHLDVPTIEPLEKLFRALVLGV 287 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY K F + ++GLSGGIDSAL A IA ALG + V ++++P ++S S++DA A A Sbjct: 288 RDYAGKCGFKRALLGLSGGIDSALVAVIAAAALGADQVTSLLMPSPWSSAGSIDDALALA 347 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 K LG + I L+ +F + + L + P G+ AEN+QSRIRG +LMAL+N +LL Sbjct: 348 KRLGMATHTVSIATLMTNFEAALIPPLGKPPEGVTAENLQSRIRGTLLMALANQQDQLLL 407 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTE 458 +T NKSE++VGY TLYGDM+GG + D+YKT VF+L W +S + GL E Sbjct: 408 STGNKSELAVGYCTLYGDMNGGLAVIGDVYKTNVFRLCDWLDSPAAETCRKEVGLPTKGE 467 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRY 517 +I +I +K PSAELRP+Q D +SLP Y +LD ++K ++E S + +N + Sbjct: 468 LIGTTIRQKPPSAELRPNQRDSDSLPDYALLDPLLKALIEERLSTEQLVSRGHNPALIGR 527 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 V+ LL +E+KRRQAP K+++++FG PI+ + Sbjct: 528 VQQLLRRAEFKRRQAPPLLKVSSQAFGSGWRLPIAAE 564 >gi|260436677|ref|ZP_05790647.1| glutamine-dependent NAD(+) synthetase (NAD (+) synthase[glutamine-hydrolyzing]) [Synechococcus sp. WH 8109] gi|260414551|gb|EEX07847.1| glutamine-dependent NAD(+) synthetase (NAD (+) synthase[glutamine-hydrolyzing]) [Synechococcus sp. WH 8109] Length = 557 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 199/571 (34%), Positives = 304/571 (53%), Gaps = 35/571 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQLNPV+GD GN + A A Q ++L+L EL + GYPP D + + S ++ Sbjct: 1 MRIALAQLNPVIGDFEGNAKRILEAVLRAEEQAVELVLTPELSLWGYPPRDQLLEPSRLK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLPNY 120 + L + + ++VG + + N VV+++ + K LP+Y Sbjct: 61 QQDMVLQWLVNQL-NSSVTLLVGAALPATDARSPRLHNGVVLVNRLGWRPIAQKQLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVF-RDIRLGILICEDIWKN----------SNICKHLKKQGAE 169 F E+R F G + R+G+ ICED+W + + L + + Sbjct: 120 DVFDERRYFRPGDGPCLLRLPNGKRVGLTICEDLWVDDGLQRERLDGPDPIDQLIPEQPD 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L ASP+ +K R ++ ++ P+IY+NQVGG DEL+FDGASF + Sbjct: 180 LVINLAASPFDASKPALRQQLAAAAAQRLNCPLIYLNQVGGNDELVFDGASFVMGADGAM 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 ++ E + + SD S P+ E + A VL +RDY +K Sbjct: 240 QLELPVCEEHLAV-------------WDSDHPTSIQIQPMPPLERLFRALVLGVRDYARK 286 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 F+K ++GLSGGIDSAL A IA ALG E V +++P ++S S++DA A A+ LG + Sbjct: 287 CGFNKALLGLSGGIDSALVAVIASAALGNEAVSALLMPSPWSSAGSIDDALALAERLGLQ 346 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + +PI L+ + ++ L P G+ AEN+QSRIRG +LMA++N +LLTT NKS Sbjct: 347 TNTVPIAGLMEGYDQALTAPLGATPQGVTAENLQSRIRGTLLMAVANQQGQLLLTTGNKS 406 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVIPPSI 464 E++VGY TLYGDM+GG + DLYKT VF L W +S GL E++ +I Sbjct: 407 ELAVGYCTLYGDMNGGLAVIGDLYKTSVFALCDWLDSDAALGCRQALGLPTHGELVGEAI 466 Query: 465 LEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEES-FINNDQEYNDETVRYVEHLLY 523 K PSAELRP+Q D +SLP Y LD ++K +++ +S + ++ V+ VE LL Sbjct: 467 RRKPPSAELRPNQKDSDSLPDYHALDALLKALIQERQSGPTLVEAGHDPALVQRVERLLK 526 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 +E+KRRQA K++ ++FG PI+ Sbjct: 527 KAEFKRRQAAPLLKVSPQAFGSGWRLPIAAA 557 >gi|33863728|ref|NP_895288.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9313] gi|33635311|emb|CAE21636.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9313] Length = 581 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 210/577 (36%), Positives = 313/577 (54%), Gaps = 40/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQLNP+VGD+AGN K A EA G DL+L EL + GYPP DL+ + + Sbjct: 18 MRLALAQLNPLVGDLAGNGEKILAACREAADLGADLVLTPELSLWGYPPRDLLLSHNHLV 77 Query: 65 ACSSAIDTLKSDTHDG--GAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKINLP 118 S ++ + S ++VG Q + + N++ ++ + V K LP Sbjct: 78 QQSDVLNKMASILAREVPDLAVLVGLAEQAHDPQLPQLFNALALIKSSQWQVVARKQLLP 137 Query: 119 NYSEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKN----------SNICKHLK 164 Y F EKR F + + F R RLG+ ICED+W + L Sbjct: 138 IYDVFDEKRYFRPAGTPAVLEFERDGRRWRLGLTICEDLWVEEALQGKRIAGPDPIAALL 197 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 Q + L +L+ASP+ +K R + + P+IYVNQVGG DEL+FDGASF D Sbjct: 198 PQNIDLLLNLSASPFSQSKELLRQRLAARAAQRLSAPVIYVNQVGGNDELVFDGASFVVD 257 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-YNACVLSL 283 +LA Q+ E + + +A+ + IP E + A VL + Sbjct: 258 EHAELALQLPSCREALAIWDAT-------------STATHLDIPTIEPLEKLFRALVLGV 304 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACA 343 RDY K F + ++GLSGGIDSAL A IA A+G + V ++++P ++S S++DA A A Sbjct: 305 RDYAGKCGFKRALLGLSGGIDSALVAVIAAAAVGADQVTSLLMPSPWSSAGSIDDALALA 364 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 K LG + I L+ +F + + L + P G+ AEN+QSRIRG +LMAL+N +LL Sbjct: 365 KRLGMATHTVSIATLMTNFEAALIPPLGKPPEGVTAENLQSRIRGTLLMALANQQDQLLL 424 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTE 458 +T NKSE++VGY TLYGDM+GG + D+YKT VF+L W +S + GL E Sbjct: 425 STGNKSELAVGYCTLYGDMNGGLAVIGDVYKTNVFRLCDWLDSPAAETCRKEVGLPTKGE 484 Query: 459 VIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRY 517 +I +I +K PSAELRP+Q D +SLP Y +LD ++K ++E S + ++ + Sbjct: 485 LIGTTIRQKPPSAELRPNQRDSDSLPDYALLDPLLKALIEERLSTEQLVSRGHDPALIGR 544 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 V+ LL +E+KRRQAP K+++++FG PI+ + Sbjct: 545 VQQLLRRAEFKRRQAPPLLKVSSQAFGSGWRLPIAAE 581 >gi|195953782|ref|YP_002122072.1| NAD synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195933394|gb|ACG58094.1| NAD+ synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 561 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 199/573 (34%), Positives = 304/573 (53%), Gaps = 38/573 (6%) Query: 1 MLKKL-KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M K+ +++ Q+N VG N+ K +A + +I+F EL + GY P+D+++ Sbjct: 1 MSSKILNVSLCQINTTVGTFEKNLEKTCDFISKA--KNSHIIVFPELSLCGYMPQDIIYS 58 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 F+ + LK + + IVVGF ++++ V NS+ +L G ++ DK LPN Sbjct: 59 SKFLDLNKLYFEKLKEHSKSIDSVIVVGF-VREEKAVYNSLGVLFKGEVLGFYDKRFLPN 117 Query: 120 YSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 Y+ F EKR F SG + + DIR G ICEDIW + +GAE L ++NASPY Sbjct: 118 YNVFDEKRYFKSGEKDLLLDINDIRCGFSICEDIWYPDGTERQDALKGAEVLININASPY 177 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 K + + + S ++YVN VG DEL+F+G S + + K F E Sbjct: 178 ALKKQTFKENFLKARASDNLCFLVYVNLVGANDELVFNGESLVIGPKGDTIAKAKAFEED 237 Query: 240 NFMTEWHYDQQLSQWNYMSDDSAST--------------------MYIPLQEEEADYNAC 279 + ++ +++ L +EE A Sbjct: 238 ILHVSLDIKEVFTKRRTDLRWQEVCKPINSNISINISKNQRYDNTIHLSLPKEEELIKAI 297 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDA 339 LS++DY +K F K I+GLSGGIDSAL +AV ALGKE+V+ + +P + +S +DA Sbjct: 298 TLSIKDYFKKQGFSKAILGLSGGIDSALVLYLAVLALGKESVKAVYMPTVFNKEESYKDA 357 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 A + L +V+PI ++ + Q I EN+Q+RIR NIL +SN Sbjct: 358 KALCENLDVDLEVIPIENIRTAY----EQIFSYHNFDIADENLQARIRANILFYISNKEN 413 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 ++L+TSNKSE +VGY T+YGDM+GGF+P+KDLYKT+V+++A + N E+ Sbjct: 414 RIVLSTSNKSESAVGYTTIYGDMAGGFSPIKDLYKTEVYEIAYFINKD---------KEI 464 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVE 519 IP + + K PSAELRP+Q DQ++LPPY +LD I+ ++E + + E++ E V V Sbjct: 465 IPKNTINKPPSAELRPNQKDQDTLPPYDVLDKILWLLIEEYKDKEDIT-EFDREVVEKVY 523 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 +L +EYKR+QAP+G K+ ++FG YPI Sbjct: 524 DMLLKAEYKRKQAPIGPKLHERAFGIGWRYPIV 556 >gi|86156713|ref|YP_463498.1| NH(3)-dependent NAD(+) synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773224|gb|ABC80061.1| NH(3)-dependent NAD(+) synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 569 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 201/575 (34%), Positives = 294/575 (51%), Gaps = 26/575 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +IA+AQ+N VGD AGN A+ R A E A G L +F EL + GYPP DL+ Sbjct: 1 MARSGRIALAQVNTTVGDFAGNAARVRAAAEVARDAGAALAVFPELTVCGYPPRDLLDLP 60 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKI 115 F++ A++ L G +VVGFP V N+ ++ G + AV K Sbjct: 61 DFLERARQALEELARPAAWSKGIALVVGFPEAPAGAPPPGVYNAAALISEGRVAAVGRKS 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR---DIRLGILICEDIWKNS----------NICKH 162 LP Y F E R F+ ++ + LG+ +CEDIW + + Sbjct: 121 LLPTYDVFDETRYFLPAGASTTAAAPEGLGVPLGLSVCEDIWNDQRFWDRPRYARDPIAD 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L + GA + +++ASPY K R +++ PI YVNQVGG D L+FDG S Sbjct: 181 LVRAGAGLVVNVSASPYAMGKAPLRERMLSASARDHGAPIAYVNQVGGNDALLFDGGSML 240 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 + + F E + + L+ + + A V+ Sbjct: 241 LARDGAVLARAPLFEEVVLVCDLDGGAPLALGLDGRPLPPPPAPPADPQADEVLRALVMG 300 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RDYV+K F + ++GLSGGIDSAL A +A +ALG ENV + +P +Y+S S EDAA Sbjct: 301 VRDYVRKCGFRQAVVGLSGGIDSALTACVAAEALGAENVLGVAMPSRYSSGHSREDAAEL 360 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG + + I + F + ++ + +N+Q+RIRG ILMA+SN + A++ Sbjct: 361 ARNLGVGFREIGIEPMHAAFLAALAADGAPPLCDLADQNVQARIRGQILMAISNDTGALV 420 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 LTT NKSEI+VGY TLYGDM+GG + D+ KT V+ + ++P Sbjct: 421 LTTGNKSEIAVGYCTLYGDMAGGLAAIGDVPKTLVY-------RVARAANARAGRTLVPE 473 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHL 521 K PSAEL+P Q DQ+SLPPY +LDDI++ VE + +++ TVR V + Sbjct: 474 RTFTKPPSAELKPGQLDQDSLPPYDVLDDILQAYVEERRPLEAIVARGHDEATVRRVLRM 533 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + SEYKRRQA K++ K+FG R +PI+ +R Sbjct: 534 VVQSEYKRRQAAPVLKVSEKAFGEGRRFPIAQGYR 568 >gi|317968990|ref|ZP_07970380.1| carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. CB0205] Length = 561 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 205/574 (35%), Positives = 300/574 (52%), Gaps = 39/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD++GN A+ A A G DL++ +EL + GYPP DL+ + S Sbjct: 1 MRVALAQINPLVGDLSGNGAQLLEACRHAAEGGADLVVSSELALWGYPPRDLLLRPSLRH 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 + +D L D G +++G +G + NSV +++ G V K LP+Y Sbjct: 61 KQDAVLDGLARDLPT-GQSLLLGVSETVSDGQQPDLFNSVALVEKGVWRIVARKRLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNS----------NICKHLKKQ 166 F E+R F + R RLG+ ICED+W + L Sbjct: 120 DVFDERRYFRPAEEPCLLELEREGRRWRLGLTICEDLWVEEQLHSQRLLGGDPVGDLAAL 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 + L +L+ASP+ K + R E+ + P++YVNQ GG DELIFDG SF Sbjct: 180 KPDLLINLSASPFGQGKPQLRRELAKSAAQRLGAPVLYVNQAGGNDELIFDGGSFATTAN 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 ++A Q+ + +A+ +EE A VL +RDY Sbjct: 240 GEVAAQLAFGKADLA--------------CWTLGNATAAAPIPCDEELLLRALVLGVRDY 285 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +K F K ++GLSGGIDSAL A +A ALG + VQ +++P ++S S+ D+ A L Sbjct: 286 ARKCGFGKALLGLSGGIDSALVAVLAAAALGAKQVQALLMPSPWSSEGSINDSLELANRL 345 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G +PI L+ F + +S L P+G+ AEN+QSRIRG +LMA++N +LLTT Sbjct: 346 GISTQTVPIEGLMGGFDAALSAPLGGTPAGVTAENLQSRIRGTLLMAMANQQGQLLLTTG 405 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVIP 461 NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + GL E+I Sbjct: 406 NKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFHLCDWIDSEAAQAVRQELGLPAEGELIG 465 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETVRYVEH 520 +I K PSAELRP Q D +SLP Y +LD ++K ++E +S Q + V Sbjct: 466 SAIRSKPPSAELRPDQKDSDSLPDYAVLDPLLKALLEEHQSPEELAQQGTDPALAERVMG 525 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 LL +E+KRRQAP K++ ++FG PI+ Sbjct: 526 LLRRAEFKRRQAPPVLKLSQRAFGSGWRMPIAAA 559 >gi|330507845|ref|YP_004384273.1| glutamine-dependent NAD(+) synthetase [Methanosaeta concilii GP-6] gi|328928653|gb|AEB68455.1| glutamine-dependent NAD(+) synthetase [Methanosaeta concilii GP-6] Length = 550 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 208/563 (36%), Positives = 302/563 (53%), Gaps = 35/563 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ QLNP +GD+AGN RA A DL + +EL + GYPP DL+ + F++ Sbjct: 1 MKIALLQLNPTIGDLAGNKGLIARAIRRAPD--FDLAVTSELALLGYPPCDLLLNEEFVE 58 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD----QEGVLNSVVILDAGNIIAVRDKINLPNY 120 A+D L + D ++VG + + + NS ++ G + K L Sbjct: 59 RSWQALDELAEELADLPP-VLVGQAEPNTSAGERPLFNSAALIRDGKVTETFQKSMLSGC 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILIC--------EDIWKNSNICKHLKKQGAEFLF 172 FHE R F G + LGILI + + L+ +GA+ + Sbjct: 118 DLFHEDRYFQPGKEARLLQIEGQSLGILIGELLLGSSDNERQDRPDPIAELRAKGADAIV 177 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +L+ASP+ K R ++ LPI+ VNQVGG D+LIFDG S FD +L + Sbjct: 178 NLSASPFTAGKQLLREARLSDLAKKHCLPILSVNQVGGNDDLIFDGRSCFFDAAGRLIAR 237 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 + F E + + +++ + + ++ + A VL RDYV K F Sbjct: 238 GRGFEEDIIVADLDEPKEIIAADDFTFEAE------------IWRALVLGTRDYVHKCGF 285 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 V++GLSGGIDS+L AAIAV ALG NV ++LP YT S++DA A A LG K Sbjct: 286 SSVLLGLSGGIDSSLVAAIAVQALGPNNVLGVLLPSPYTRQSSIDDALALAANLGIKTIS 345 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + + D++ F +++ P I ENIQ+RIR +LMALSN ++LL T N+SE+S Sbjct: 346 ILLTDIMGSFELELAEHFAGRPKDITEENIQARIRATLLMALSNKYGSILLATGNRSELS 405 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY T+YGDM+GG + DL KT V+++A W NS VIPPSI++K PSAE Sbjct: 406 VGYCTIYGDMAGGLAVISDLPKTMVYRIAEWLNSTAS-------KPVIPPSIIKKPPSAE 458 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQ 531 LRP QTDQ+SLPPYP+LD+I+KR ++ +S + ++ TV V L+ +E+KR Q Sbjct: 459 LRPGQTDQDSLPPYPLLDEILKRYIDEHQSRADLLRAGLDEVTVDRVISLVKNAEFKRVQ 518 Query: 532 APVGTKITAKSFGRDRLYPISNK 554 A +G K+ KSFG P++ + Sbjct: 519 AALGLKVIDKSFGEGWRMPVACR 541 >gi|264676785|ref|YP_003276691.1| NAD+ synthetase [Comamonas testosteroni CNB-2] gi|262207297|gb|ACY31395.1| NAD+ synthetase [Comamonas testosteroni CNB-2] Length = 567 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 213/575 (37%), Positives = 315/575 (54%), Gaps = 32/575 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ +AQLN +VGDI+GNI + R A A + DL++F+EL + GY P DL+ + SF+Q Sbjct: 2 LKVTLAQLNYMVGDISGNIRRMREAATRAAAEQADLVVFSELSLCGYYPGDLLDEPSFLQ 61 Query: 65 ACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNY 120 + + L T VVG P + + NS+++L G I DK LP Y Sbjct: 62 RLDAGLQELLQATRLLPDLHWVVGAPTRHDGPGKPLHNSLLVLKNGQIRLQYDKQLLPTY 121 Query: 121 SEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G + + + ++G L+CED W + N + + + S Sbjct: 122 NIFDERRHFEPGADTAKVLRVGNCQVGFLVCEDGWNDQGADYATNPFVRMGDAAPDLVIS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + K ++RHE+ T + L I+Y+NQ+GGQD+++FDGASF + + L F+ Sbjct: 182 INASPSHLGKREQRHEVFTQAAARHKLAILYINQIGGQDQIVFDGASFAVEPEAGLVFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 + F E E + + + + + T +P E VL LRDY ++ F Sbjct: 242 RRFEEDVCTLELNAQGRFQACDGTALPAVPTQGLPTMEFYRQQ--IVLGLRDYARRCGFK 299 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +V++G SGGIDSAL A+AVDALG +NV I +P Y+S S++D+ + LG + Sbjct: 300 QVVVGSSGGIDSALTLALAVDALGADNVVGITMPSSYSSAGSVDDSVLLCRNLGIRLYEH 359 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI +LV + E G+ EN+Q+R RG LM SN +LLTT NKSE+SV Sbjct: 360 PIKELVTTYARQFEASFGEPLKGLALENLQARARGTTLMEFSNAFGHLLLTTGNKSEVSV 419 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGD +GG L DLYKT+VF+L+ N H E+IP +I++K PSAEL Sbjct: 420 GYCTLYGDTNGGLGLLGDLYKTEVFELSRHINRHAGR-------ELIPQAIIDKPPSAEL 472 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEE----------SFIN--NDQEYNDETVRYVEHL 521 P Q D++SLPPY +LD+I+K +E + +F+ Q ET+ V+ L Sbjct: 473 APGQKDEDSLPPYAVLDEILKWHIEGQHLSNKEYAHAATFVAKLRTQAGGPETIARVQKL 532 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ SEYKRRQAP ++ ++FG R PI+ + Sbjct: 533 VFRSEYKRRQAPPMLRVRPRAFGTGRQMPIAAHYE 567 >gi|300313858|ref|YP_003777950.1| NH(3)-dependent NAD(+) synthetase [Herbaspirillum seropedicae SmR1] gi|300076643|gb|ADJ66042.1| NH(3)-dependent NAD(+) synthetase protein [Herbaspirillum seropedicae SmR1] Length = 565 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 199/574 (34%), Positives = 301/574 (52%), Gaps = 33/574 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+IAIAQ NP +GD GN+A + A + G DL++F EL I GY P DL+ + F+ Sbjct: 2 LRIAIAQCNPTIGDFEGNLALHLDGLQRAAQAGADLVVFPELSICGYYPGDLLEEARFLD 61 Query: 65 ACSSAIDTLKSDTHDG-GAGIVVGFPRQD---QEGVLNSVVILDAGNIIAVRDKINLPNY 120 + + + T G V+G PR++ + + N+++ + G I+A K LP Y Sbjct: 62 RAEATLQDVIDATRRLPGLTAVIGAPRRNPGPGKPLFNALLAVREGRIVAEYHKQLLPVY 121 Query: 121 SEFHEKRTFISGYSN-DPIVFRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 F + R F +G + + +R+G LICED W + N + L + A+ + S Sbjct: 122 GVFDDGRHFEAGPETACVLPLKGMRVGFLICEDGWNDDLRSYRVNPFEKLAQADAQLVVS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP K +RH + + ++YVNQVGGQD+L++DG SF Q LAF+ Sbjct: 182 INASPSDVGKRSQRHALFQAACLRRQMALLYVNQVGGQDQLVYDGGSFAMSPLQGLAFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 +E + + + L + + +L LRDY ++ F Sbjct: 242 ARLAEDFQVLAFEGGRFLRSDGVGAPQCIDQTMATPEFHRRQ---ILLGLRDYARRCGFG 298 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 KV++G SGGIDSA+ A+A +ALG +NV + +P ++S S+ D+ +ALG Sbjct: 299 KVVVGSSGGIDSAVTIALAAEALGAQNVVAVTMPSVFSSAGSVSDSETLCQALGVTLFRH 358 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI DLV F + G+ EN+Q+R+RG ILM SN A+LLTT NKSEISV Sbjct: 359 PIADLVREFEDGFATAFGAPLRGLPLENLQARVRGAILMEYSNGYDALLLTTGNKSEISV 418 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGD +GG + DLYKT+V+ LA N+ E+IP +I++K+PSAEL Sbjct: 419 GYCTLYGDTNGGLGLIGDLYKTEVYALARHLNAQAGR-------EIIPAAIIDKAPSAEL 471 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ------------EYNDETVRYVEHL 521 P Q D +SLPPY +LD+I+K +E + Q + V + + Sbjct: 472 APDQRDTDSLPPYEVLDEILKWHIEGSRLPADEAQAAARTVEQLSGTDTGAALVERICRM 531 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +EYKRRQ+P ++ +++FG R PI+ ++ Sbjct: 532 VARNEYKRRQSPPVIRLRSRAFGSGRQIPIAVRY 565 >gi|254432694|ref|ZP_05046397.1| glutamine dependent NAD+ synthetase [Cyanobium sp. PCC 7001] gi|197627147|gb|EDY39706.1| glutamine dependent NAD+ synthetase [Cyanobium sp. PCC 7001] Length = 567 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 204/577 (35%), Positives = 303/577 (52%), Gaps = 37/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQLNP+VGD+AGN + RA +A G DL+L EL + GYPP DL+ + + Sbjct: 1 MRLALAQLNPLVGDLAGNAERILRAWRKAAAAGADLVLTPELSLWGYPPRDLLLHPARLA 60 Query: 65 ACSSAIDTLKSDTH--DGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 A ++ +D L ++VG + N++ ++D+ V K LP Sbjct: 61 AQTTVLDQLAGALAGQANAPALLVGIAETSGSRELPNLHNALALVDSCGWRVVARKQLLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKN----------SNICKHLK 164 Y F E+R F G + R RLG+ +CED+W + L+ Sbjct: 121 TYDVFDEQRYFRPGSEPAVLELRRGERPWRLGLTVCEDLWVEEELQGQRLAGPDPVAALR 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 E L +L+ASP+ K + RH + + P++YVNQVGG DEL+FDGASF + Sbjct: 181 GLQVELLINLSASPFSPAKTELRHALAARAAQRLGCPVVYVNQVGGNDELVFDGASFVVE 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 +A Q+ E + S D + E + A VL +R Sbjct: 241 SSGAVACQLPSCREGLEI---------WSPTTTSPDPSLPAPALPPPMEQVFRALVLGVR 291 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F ++GLSGGIDSAL A IA ALG V+ +++P ++S S++DA+A A+ Sbjct: 292 DYARKCGFQCGLLGLSGGIDSALVAVIATAALGPAAVRALLMPSPWSSAGSVDDASALAQ 351 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 LG + +PI L+ F + + L P+G+ AEN+QSRIRG +LMA++N +LL+ Sbjct: 352 RLGLRVSTVPIGPLMAGFDAALQPALGHAPTGLTAENLQSRIRGTLLMAVANQEGQLLLS 411 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYK+ VF LA+W +S ++ GL E+ Sbjct: 412 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKSTVFALAAWLDSPEASACRLELGLPAEGEL 471 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESF--INNDQEYNDETVRY 517 + +I K PSAELRP Q D +SLP Y LD +++ +VE S + D + Sbjct: 472 VGRAIRAKPPSAELRPDQRDSDSLPEYDRLDPLLEALVEERRSVEELAVDPRFGP-MAEQ 530 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 V LL +E+KRRQA K++ +F PI+ Sbjct: 531 VARLLRRAEFKRRQAAPVLKVSGHAFDSGWRMPIAAG 567 >gi|221069081|ref|ZP_03545186.1| NAD+ synthetase [Comamonas testosteroni KF-1] gi|220714104|gb|EED69472.1| NAD+ synthetase [Comamonas testosteroni KF-1] Length = 567 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 215/578 (37%), Positives = 317/578 (54%), Gaps = 38/578 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ +AQLN +VGDI+GNI + R A A + DL++F+EL + GY P DL+ + SF+Q Sbjct: 2 LKVTLAQLNYMVGDISGNIRRMREAATRAAAEQADLVVFSELSLCGYYPGDLLDEPSFLQ 61 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNY 120 + + L T VVG P + + NS+++L G I DK LP Y Sbjct: 62 RLDAGLQELLQATRQFPDLHWVVGAPTRHDGPGKPLHNSLLVLKNGQIRLQYDKQLLPTY 121 Query: 121 SEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G + + + ++G L+CED W + N + + + S Sbjct: 122 NIFDERRHFEPGADTAKVLRVGNCQVGFLVCEDGWNDQGADYATNPFVRMGDAAPDLVIS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + K ++RHE+ T + L I+Y+NQ+GGQD+++FDGASF + + L F+ Sbjct: 182 INASPSHLGKREQRHEVFTQAAARHKLAILYINQIGGQDQIVFDGASFAVEPEAGLVFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEADYNACVLSLRDYVQKN 290 + F E + E +Q + + D + +P Q E VL LRDY ++ Sbjct: 242 RRFEEDIYTLEL-----NTQGRFQACDGQTLPTVPAQGLATMEFYRQQIVLGLRDYARRC 296 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++G SGGIDSAL A+AVDALG ENV I +P Y+S S++D+ + LG + Sbjct: 297 GFQQVVVGSSGGIDSALTLALAVDALGAENVVGITMPSSYSSAGSVDDSVLLCRNLGIRL 356 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 PI +LV + E G+ EN+Q+R RG LM SN +LLTT NKSE Sbjct: 357 YEHPIKELVTTYARQFEASFGEPLKGLALENLQARARGTTLMEFSNAFGHLLLTTGNKSE 416 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +SVGY TLYGD +GG L DLYKT+VF+L+ N H E+IP +I++K PS Sbjct: 417 VSVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHINQHAGR-------ELIPQAIIDKPPS 469 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEE----------SFIN--NDQEYNDETVRYV 518 AEL P Q D++SLPPY +LD+I+K +E + +F+ + ET+ V Sbjct: 470 AELAPGQKDEDSLPPYAVLDEILKWHIEGQHLSSKEYAQAAAFVTRLRAEAGGPETIARV 529 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + L++ SEYKRRQAP ++ ++FG R PI+ + Sbjct: 530 QKLVFRSEYKRRQAPPMLRVRPRAFGTGRQMPIAAHYE 567 >gi|318042265|ref|ZP_07974221.1| carbon-nitrogen hydrolase:NAD+ synthase [Synechococcus sp. CB0101] Length = 565 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 209/574 (36%), Positives = 307/574 (53%), Gaps = 33/574 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD+AGN A+ +A + A QG DL++ EL + GYPP DL+ + + Q Sbjct: 1 MRLALAQINPLVGDLAGNGAQLLKACQAAAAQGADLVVAPELALWGYPPRDLLLRPALHQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 +D L +D + G +++G +G + NS ++ G V K LP+Y Sbjct: 61 QQQHTLDHLAADLPE-GLALLLGVSEPAGDGQQPDLFNSAALVVRGGWRIVARKRLLPSY 119 Query: 121 SEFHEKRTFISGYSNDPIVF----RDIRLGILICEDIWKNSN----------ICKHLKKQ 166 F E+R F + R RLG+ ICED+W L+ Sbjct: 120 DVFDERRYFRPADEPCLLELERGGRHWRLGLSICEDLWVEEELHPQRLLGADPVAELQAL 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 G + L +L+ASP+ K + R E+ +H P++YVNQVGG DEL+FDG SF Sbjct: 180 GPDLLINLSASPFGDGKAQLRRELAAAAARRLHCPVVYVNQVGGNDELVFDGGSFVTTAH 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 ++A Q + S S A+ +P +E VL +RDY Sbjct: 240 GEVACQ-------LAFAKTDLGVWDSTCGSPSAGRAAGAVLPKPDELLLRT-LVLGVRDY 291 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 +K F K ++GLSGGIDSAL A IA ALG +NVQ +++P ++S S+ D+ A A L Sbjct: 292 ARKCGFRKALLGLSGGIDSALVAVIAAAALGPDNVQALLMPSPWSSAGSINDSLALADRL 351 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 G + I L+ F + ++ L P+G+ AEN+QSRIRG +LMA++N +LLTT Sbjct: 352 GMATHTVAIEALMTSFDAALTPPLGGAPAGLTAENLQSRIRGTLLMAVANQQGQLLLTTG 411 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVIP 461 NKSE++VGY TLYGDM+GG + DLYKT VF+L +W +S + GL E++ Sbjct: 412 NKSELAVGYCTLYGDMNGGLAVIGDLYKTGVFRLCAWLDSEAAATCRQEMGLPTHGELVG 471 Query: 462 PSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEH 520 +I +K PSAELRP Q D +SLP Y +LD +++ ++E +S + V Sbjct: 472 RAIRDKPPSAELRPDQQDSDSLPDYAVLDPLLQALLEQHQSPEELVATGVDRALADRVMQ 531 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 LL +E+KRRQAP K+ +SFG PI+ Sbjct: 532 LLRRAEFKRRQAPPVLKLGQRSFGSGWRMPIAAA 565 >gi|121999017|ref|YP_001003804.1| NAD+ synthetase [Halorhodospira halophila SL1] gi|121590422|gb|ABM63002.1| DNA-directed RNA polymerase, subunit H [Halorhodospira halophila SL1] Length = 538 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 211/554 (38%), Positives = 310/554 (55%), Gaps = 25/554 (4%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQ-GMDLILFTELFISGYPPEDLVFKKSFI 63 ++I +AQL VG + N + A A + G DL++F EL ++GYPP+DL+ + F Sbjct: 1 MRIVVAQLPFPVGALDDNARRIIDAIGRARDEFGADLVVFPELAVTGYPPDDLLLRSDFH 60 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A A+ + + G +VG P V N+ V L G + K LP+YS F Sbjct: 61 AAVERALARIAAACT--GVTALVGAPLHRHGVVRNAAVALADGAEVGAAYKRCLPSYSVF 118 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNK 183 + R F +G + + R+G+ ICEDIW + + AE L S+NASP++ K Sbjct: 119 DDNRHFRAGDAPCLLEVAGRRIGVAICEDIWAATPAAEAAAAG-AELLVSINASPFHDGK 177 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 +R + +++ +P++Y N VGG DE+++DG SF D L+ + F++ + Sbjct: 178 QAEREGVAARRVAETGVPLLYANLVGGHDEVVYDGGSFALDDTGALSARAPAFADGLYAL 237 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +W + + + Y A V + DYV+ N F V++GLSGGI Sbjct: 238 DWQGGALHGEQAEAVEGPPAV-----------YQALVRATADYVRGNGFSGVVLGLSGGI 286 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL AA+A DALG + V +M+P +YT+ +SLEDA A A+ALG +Y +PI L + Sbjct: 287 DSALVAAVAADALGGDRVLAVMMPTRYTAERSLEDARAAAQALGLEYRSIPIESLFADYE 346 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 ++ + ENIQ+RIRGN LMALSN MLL NKSE++VGY TLYGDM Sbjct: 347 QALAPLFAGREADATEENIQARIRGNCLMALSNKLGLMLLAAGNKSELAVGYATLYGDMC 406 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 GGF PLKD+YKT V++LA +RNS L +P +I+E+ P+AELR Q D +SL Sbjct: 407 GGFAPLKDVYKTDVYRLAEYRNS---------LGPAVPAAIIEREPTAELRADQRDSDSL 457 Query: 484 PPYPILDDIIKRIVENEESFINNDQEYNDET-VRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD ++++ +E++ + E D + V LLY +EYKRRQA G K+T ++ Sbjct: 458 PPYRVLDAVLRQYLEDDAAEHEIRVEGLDAVELCRVIRLLYRNEYKRRQAAPGVKVTRRA 517 Query: 543 FGRDRLYPISNKFR 556 FGRDR YPI++ + Sbjct: 518 FGRDRRYPITSGWS 531 >gi|299529607|ref|ZP_07043044.1| NAD+ synthetase [Comamonas testosteroni S44] gi|298722470|gb|EFI63390.1| NAD+ synthetase [Comamonas testosteroni S44] Length = 567 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 216/578 (37%), Positives = 316/578 (54%), Gaps = 38/578 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ IAQLN +VGDI+GNI + R A A + DL++F+EL + GY P DL+ + SF+Q Sbjct: 2 LKVTIAQLNYMVGDISGNIRRMREAATRAAAEQADLVVFSELSLCGYYPGDLLDEPSFLQ 61 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEG---VLNSVVILDAGNIIAVRDKINLPNY 120 + + L T VVG P + + NS+++L G I DK LP Y Sbjct: 62 RLDAGLQELLQATRQFPDLHWVVGAPTRHNGPGKPLHNSLLVLKNGQIRLQYDKQLLPTY 121 Query: 121 SEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G + + + ++G L+CED W + N + + + S Sbjct: 122 NIFDERRHFEPGADTAKVLRVGNCQVGFLVCEDGWNDQGADYATNPFVRMGDAAPDLVIS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + K ++RHE+ T + L I+Y+NQ+GGQD+++FDGASF + + L F+ Sbjct: 182 INASPSHLGKREQRHEVFTQAAARHKLAILYINQIGGQDQIVFDGASFAVEPEAGLVFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ---EEEADYNACVLSLRDYVQKN 290 + F E E +Q + + D + +P Q E VL LRDY ++ Sbjct: 242 RRFEEDVCTLEL-----NAQGRFQACDGTALPTVPAQGLATMEFYRQQIVLGLRDYARRC 296 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++G SGGIDSAL A+AVDALG +NV I +P Y+S S++D+ + LG + Sbjct: 297 GFQQVVVGSSGGIDSALTLALAVDALGADNVVGITMPSSYSSAGSVDDSVLLCRNLGIRL 356 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 PI +LV + E G+ EN+Q+R RG LM SN +LLTT NKSE Sbjct: 357 YEHPIKELVTTYARQFEASFGEPLKGLALENLQARARGTTLMEFSNAFGHLLLTTGNKSE 416 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +SVGY TLYGD +GG L DLYKT+VF+L+ N H E+IP +I++K PS Sbjct: 417 VSVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHINRHAGR-------ELIPQAIIDKPPS 469 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENEE----------SFIN--NDQEYNDETVRYV 518 AEL P Q D++SLPPY +LD+I+K +E + +F+ Q ET+ V Sbjct: 470 AELAPGQKDEDSLPPYAVLDEILKWHIEGQHLSNKEYAHAATFVAKLRTQAGGPETIARV 529 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + L++ SEYKRRQAP ++ ++FG R PI+ + Sbjct: 530 QKLVFRSEYKRRQAPPMLRVRPRAFGTGRQMPIAAHYE 567 >gi|123969180|ref|YP_001010038.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. AS9601] gi|123199290|gb|ABM70931.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. AS9601] Length = 565 Score = 510 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 216/577 (37%), Positives = 319/577 (55%), Gaps = 38/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A+ D +L EL + GYP DL+ KK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILNIASKASSISADFVLTPELSLWGYPANDLLLKKNLIK 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 +D L SDT+ G I VG + + NS+ +++ G + KI LP Sbjct: 61 NQYQILDKLASDTNKKYGNLSITVGIAELINDSFFPNLYNSIALVEGGEWRIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKNSN----------ICKHLK 164 Y F EKR F S ++ + RLG ICED+W N N LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLIKKIKNQTWRLGFTICEDLWVNKNIEGRGIHRKNPIVDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG SF D Sbjct: 181 KKEVDILVNLSASPYTLKKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGNSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE ++ W +Q + + E + ++A VL ++ Sbjct: 241 KNGSTIKQLKSFSED--LSSWEIEQTKPEKKEFKN----------SEMSSIFDALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F ++GLSGGIDSAL +AIA ALG ENV + +P K++S S DA A+ Sbjct: 289 DYAKKCRFKTALVGLSGGIDSALVSAIATAALGSENVYCVSMPSKWSSSHSKIDAKDLAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + +PI +L+N F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLKISFKSIPIENLMNSFEESFIKTIDFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-----HGITSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L +W +S H + L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCNWLDSEDSINHRKSYMLDTNVDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I +I K+PSAEL P Q D +SLPPY ILD+I+K I+E ++ ++ Y + + + Sbjct: 469 IGKNIRTKAPSAELGPDQLDTDSLPPYSILDNILKGIIEEKKDLQQLEKDGYKKDLILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QAP K++++S G D PI+ + Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRVPIAISY 565 >gi|220915428|ref|YP_002490732.1| NAD+ synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953282|gb|ACL63666.1| NAD+ synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 569 Score = 510 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 201/575 (34%), Positives = 296/575 (51%), Gaps = 26/575 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +IA+AQ+N VGD AGN A+ R A E A G L +F EL + GYPP DL+ Sbjct: 1 MARSGRIALAQVNTTVGDFAGNAARVRAAAEVAREAGAALAVFPELTVCGYPPRDLLDLP 60 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQE----GVLNSVVILDAGNIIAVRDKI 115 F++ A++ L G +VVGFP GV N+ ++ G ++AV K Sbjct: 61 DFLERARQALEELARPAAWSKGIALVVGFPEAPDGAPPPGVYNAAALISDGRVVAVGRKS 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR---DIRLGILICEDIWKNS----------NICKH 162 LP Y F E R F+ ++ + LG+ +CEDIW + + Sbjct: 121 LLPTYDVFDETRYFLPAGASTTAAAPEGLGVPLGLSVCEDIWNDQRFWERPRYARDPIAD 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L + GA + +++ASPY K R +++ PI YVNQVGG D L+FDG S Sbjct: 181 LVRAGAGLVVNVSASPYAMGKAPLRERMLSASARDHGAPIAYVNQVGGNDALLFDGGSML 240 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 + + F E + + L+ + + A V+ Sbjct: 241 LARDGAVLARAPLFEEAVLVCDLEGGAPLALGLDGRPLPPPPPPPADAQADEVLRALVMG 300 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RDYV+K F + ++GLSGGIDSAL A IA +ALG ENV + +P +Y+S S EDAA Sbjct: 301 VRDYVRKCGFRQAVVGLSGGIDSALTACIAAEALGAENVLGVAMPSRYSSGHSREDAAEL 360 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG ++ + I + F + ++ + +N+Q+R+RG ILMA+SN + A++ Sbjct: 361 ARNLGVRFREIGIEPMHAAFLAALAADGAPPLCDLADQNVQARVRGQILMAISNDTGALV 420 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 LTT NKSEI+VGY TLYGDM+GG + D+ KT V+ + ++P Sbjct: 421 LTTGNKSEIAVGYCTLYGDMAGGLAAIGDVPKTLVY-------RVARAANARAGRTLVPE 473 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHL 521 K PSAEL+P Q DQ+SLPPY +LDDI++ VE + +++ VR V + Sbjct: 474 RTFTKPPSAELKPGQLDQDSLPPYDVLDDILQAYVEERRPLEAIVARGHDEAIVRRVLRM 533 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + SEYKRRQA K++ K+FG R +PI+ +R Sbjct: 534 VVQSEYKRRQAAPVLKVSEKAFGEGRRFPIAQGYR 568 >gi|78779923|ref|YP_398035.1| NAD+ synthetase [Prochlorococcus marinus str. MIT 9312] gi|78713422|gb|ABB50599.1| NAD+ synthetase [Prochlorococcus marinus str. MIT 9312] Length = 565 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 212/577 (36%), Positives = 312/577 (54%), Gaps = 38/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A D +L EL + GYP DL+ KK+ I Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILYIASQAYSISADFVLTPELSLWGYPANDLLLKKNLIN 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 S + L D + G I VG + + + NS+ +++ G + KI LP Sbjct: 61 NQSQILHQLALDINKKYGNLSITVGIAERINDSFFPNLYNSIALIENGAWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSND----PIVFRDIRLGILICEDIW----------KNSNICKHLK 164 Y F EKR F S I ++ R+G ICED+W N LK Sbjct: 121 TYEVFDEKRYFRSAEKVSILIKKIKNKNWRIGFTICEDLWVNKDIEGRGIHKKNPIIDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG SF D Sbjct: 181 KKKVDLLVNLSASPYTFKKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGNSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE + + W +Q + N E + ++A VL +R Sbjct: 241 KNGSKIKQLKAFSEDH--SSWEIEQTKPEKN----------KFETSEISSIFDALVLGVR 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +IGLSGGIDSAL +AIA ALG N+ + +P K++S S DA A Sbjct: 289 DYAKKCGFKTALIGLSGGIDSALVSAIATAALGSNNIYCVSMPSKWSSSHSKNDAKDLAI 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L ++ +PI +L+ F + + L E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLKINFNSIPIENLMTSFEESLIKTLTFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-----HGITSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L +W + H + L + Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCNWLDGEDSINHRKSYMLDTNVNI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I +I K+PSAEL P Q D +SLPPY LD+I+K I+E ++ ++ + E + + Sbjct: 469 IGENIRTKAPSAELGPDQLDTDSLPPYSTLDNILKGIIEEKKDLKQLEEDGHEKELILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QAP K++++S G D +PI+ + Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRFPIAISY 565 >gi|218461035|ref|ZP_03501126.1| NAD(+) synthase (glutamine-hydrolysing) protein [Rhizobium etli Kim 5] Length = 430 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 236/428 (55%), Positives = 293/428 (68%), Gaps = 7/428 (1%) Query: 132 GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIV 191 G P+ FR +RLGI ICEDIW +C+ L + GAE L S N SPYY K+ RH++V Sbjct: 9 GAMPGPVNFRGVRLGIPICEDIWGELGVCETLAESGAEILLSPNGSPYYRGKVDIRHQVV 68 Query: 192 TGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQL 251 Q+ LP+IY Q+GGQDEL+FDGASF F+ + LAFQM F +T W + Sbjct: 69 LKQVIETGLPLIYAAQLGGQDELVFDGASFAFNADRSLAFQMSEFETALAVTTWKRGESG 128 Query: 252 SQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 IP EE Y AC+L RDYV KN F V++GLSGGIDSA+CAAI Sbjct: 129 WHC-----AEGPMARIPEDEEAD-YRACLLGFRDYVNKNGFKTVVLGLSGGIDSAICAAI 182 Query: 312 AVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQ 371 AVDALG+E V+T+MLPY+YTS SL+DAA CAKALGC+YD++PI V F S +S + Sbjct: 183 AVDALGEERVRTVMLPYRYTSEDSLKDAADCAKALGCRYDIVPIEQPVTGFSSALSDLFE 242 Query: 372 EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKD 431 SGI EN+QSR RG ILMA+SN AM++TT NKSE+SVGY TLYGDM+GGFNP+KD Sbjct: 243 GTESGITEENLQSRARGVILMAISNKFGAMVVTTGNKSEMSVGYATLYGDMNGGFNPIKD 302 Query: 432 LYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 LYK QV+ LA WRN + S LGP EVIP +I++K+PSAELRP Q DQ+SLPPYP+LDD Sbjct: 303 LYKMQVYALARWRNENVPPSALGPSGEVIPQNIIDKAPSAELRPDQKDQDSLPPYPVLDD 362 Query: 492 IIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYP 550 I++ +VE E + + ++ V VEHLLY +EYKRRQ+ G KIT K+FGRDR YP Sbjct: 363 ILECLVEKEMAVEEIVARGHDVAIVHRVEHLLYLAEYKRRQSAPGVKITKKNFGRDRRYP 422 Query: 551 ISNKFRDH 558 I+N+FRD Sbjct: 423 ITNRFRDR 430 >gi|126696974|ref|YP_001091860.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9301] gi|126544017|gb|ABO18259.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9301] Length = 565 Score = 507 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 214/577 (37%), Positives = 319/577 (55%), Gaps = 38/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A+ D +L EL + GYP DL+FKK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAQKILNIASKASSISADFVLTPELSLWGYPANDLLFKKNLIK 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 S +D L D + G I VG + + + NS+ +++ G + KI LP Sbjct: 61 NQSQILDQLALDINKKYGNLSITVGIAEKVNDSFFPNLYNSIALVEGGEWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIV----FRDIRLGILICEDIWKNS----------NICKHLK 164 Y F EKR F S ++ + RLG ICED+W N N LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLIKQIKNKTWRLGFTICEDLWVNKDIEGRGIHRKNPIIDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG SF D Sbjct: 181 KKKVDILVNLSASPYTLKKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGNSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE ++ W +Q + N + E + ++A VL ++ Sbjct: 241 KNGSKIKQLKSFSED--LSSWEIEQTKPEKNEFKN----------SEMSSIFDALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F ++GLSGGIDSAL +AIA ALG +NV + +P K++S S DA A+ Sbjct: 289 DYAKKCGFKTALVGLSGGIDSALVSAIATAALGSDNVYCVSMPSKWSSSHSKSDAKDLAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + +PI +L++ F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLKISFKSIPIENLMSSFEESFIKTISFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L +W +S + L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCNWLDSEDSINSRKLYMLNTSVDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I +I K+PSAEL P Q D +SLPPY ILD I+K I+E ++ ++ Y + + + Sbjct: 469 IGENIRTKAPSAELGPDQLDTDSLPPYSILDKILKGIIEEKKDLQQLEEDGYKKDLILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QAP K++++S G D PI+ + Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRVPIAISY 565 >gi|239820928|ref|YP_002948113.1| NAD+ synthetase [Variovorax paradoxus S110] gi|239805781|gb|ACS22847.1| NAD+ synthetase [Variovorax paradoxus S110] Length = 566 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 196/574 (34%), Positives = 300/574 (52%), Gaps = 33/574 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I +AQLNP +GD+AGN A+ A A DL++F+EL ++ Y P DL+ + F+ Sbjct: 2 LRITVAQLNPTIGDLAGNTARMIEAARRAAADESDLVVFSELSLTAYYPADLLEEDGFMD 61 Query: 65 ACSSAIDTLKSDTHDGGA-GIVVGFPRQDQE---GVLNSVVILDAGNIIAVRDKINLPNY 120 A L S + + A VG P + + + N + ++ AG + K LP Y Sbjct: 62 RVEEAFGQLLSASREMPALHWAVGLPARREGAGKKLRNVLRVISAGEVRLEYAKQLLPTY 121 Query: 121 SEFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G + R R+G LICED W + N ++ + + S Sbjct: 122 NVFDERRHFEPGPDVARVLRIRGTRVGFLICEDGWNDEGQDYLVNPFDRMRDAAPDLVVS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP K ++RH I LPI+YVNQVGG D+L++DGASF + Q + ++ Sbjct: 182 INASPSNIGKREQRHRIFGAASRRNGLPILYVNQVGGHDQLVYDGASFAVEPQAGVVYEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 F+E + D + + +P E VL LRDY ++ F Sbjct: 242 HRFAEDVSTLRFE-DGRFLTPAGEAPPPVPPQGLPTLEFYRQQ--IVLGLRDYARRCGFR 298 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + ++G SGGIDSAL A+AV+ALG +NV I +P +++S S++D+ + LG + Sbjct: 299 QAVVGSSGGIDSALTLALAVEALGAQNVVAITMPSRFSSAGSVDDSERLCRNLGVPLEAH 358 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 I +V+ F + + EN+Q+R+RG +LM SN +LLTT NKSEISV Sbjct: 359 AIAGVVSQFEQGFETAFGQGLEDVALENLQARVRGTVLMGYSNSFGHLLLTTGNKSEISV 418 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGD +GG + DLYKT+VF L+ N+ E+IP +IL+K PSAEL Sbjct: 419 GYCTLYGDTNGGLGLIGDLYKTEVFALSRHLNAQAGR-------ELIPQAILDKEPSAEL 471 Query: 474 RPHQTDQESLPPYPILDDIIKRIV----------ENEESFINNDQEYN--DETVRYVEHL 521 P Q D +SLP Y +LD+++K ++ E SF++ + + V + + Sbjct: 472 APGQKDADSLPSYEVLDEVLKLLIEGQRLGAQEYEQARSFVDRLRATPEGEALVERIRGM 531 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 + +EYKRRQ+P ++ ++FG R PI+ ++ Sbjct: 532 VARNEYKRRQSPPIVRVRPRAFGSGRQMPIAARW 565 >gi|4469317|emb|CAB38325.1| NAD(+) synthase (glutamine-hydrolysing) [Streptomyces coelicolor A3(2)] Length = 538 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 192/544 (35%), Positives = 283/544 (52%), Gaps = 48/544 (8%) Query: 53 PEDLVFKKSFIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ----------EGVLNS 99 EDL + SF++A +A+ +L + D G G ++VG + N+ Sbjct: 2 LEDLALRSSFVEASRAALRSLAARLADEGLGTVPVIVGHLDRSATAQPRYGQPAGAPQNA 61 Query: 100 VVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNI 159 +L G + K +LPNY F E R F+ G + + R + + + ICED+W++ Sbjct: 62 AAVLYGGEVALSFAKHHLPNYGVFDEFRYFVPGDTLPVVRVRGVDVALAICEDLWQDGGR 121 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGA 219 + A L S+NASPY +K R E+V + Y+ GGQDEL+FDG Sbjct: 122 VPAARSARAGLLLSVNASPYERDKDDTRLELVRRRAQEAGCTTAYLAMTGGQDELVFDGD 181 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHY---DQQLSQWNYMSDDSASTMY---------- 266 S D + + F+E + + D + ++ +D +++ Sbjct: 182 SIVVDRDGTVLARAPQFTEGCMVLDLDLPAADADPPRASWTTDCASTGWCSPGRLGGSSR 241 Query: 267 ------------IPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 PL ++E Y+A V LR YV KN F V+IGLSGGIDSAL A+IA D Sbjct: 242 CPPVALLSGGHAEPLDDDEEVYSALVTGLRAYVAKNGFRSVLIGLSGGIDSALVASIACD 301 Query: 315 ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 ALG E+V + +P KY+S S +DAA A+ G Y + I + + + + E Sbjct: 302 ALGAEHVYGVSMPSKYSSGHSRDDAAELARRTGLHYRTVSIEPMFDAYTGAL------EL 355 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 +G+ EN+QSR+RG +LMALSN ++L NKSE++VGY TLYGD GG+ P+KD+YK Sbjct: 356 TGLAEENLQSRLRGTLLMALSNQEGHLVLAPGNKSELAVGYSTLYGDSVGGYGPIKDVYK 415 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIK 494 T VF+LA WRN G P +P + + K PSAELRP Q D +SLP YP+LD ++ Sbjct: 416 TSVFRLAEWRNRAARDRGRTP---PVPENSITKPPSAELRPGQVDTDSLPDYPVLDAVLA 472 Query: 495 RIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 V+ + Y+ E V ++ +EYKRRQ P GTKI+ K FG+DR P++N Sbjct: 473 LYVDRDRGADEIVAAGYDRELVTRTLRMVDTAEYKRRQYPPGTKISPKGFGKDRRLPVTN 532 Query: 554 KFRD 557 ++R+ Sbjct: 533 RWRE 536 >gi|123966858|ref|YP_001011939.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9515] gi|123201224|gb|ABM72832.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9515] Length = 565 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 205/577 (35%), Positives = 316/577 (54%), Gaps = 38/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQLNP+VGD+ GN K +A+ D++L EL + GYP +DL+ KK+ I+ Sbjct: 1 MKFFLAQLNPIVGDLDGNAKKILYVANKAHLNSADMVLTPELSLWGYPAKDLLLKKNLIE 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 + +D L + G I VG + + + NSVV++++G+ + KI LP Sbjct: 61 RQYTILDQLSKSINKKYGDLSITVGIAEKIDDSFFPNLYNSVVLIESGHWKTIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIV----FRDIRLGILICEDIW----------KNSNICKHLK 164 Y F EKR F S I + ++G+ ICED+W N LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVISKKIKDKTYKIGLTICEDLWVNENIDGRGIHEKNPISQLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASPY K K R++I + ++++P++Y+NQVG D+LIFDG SF + Sbjct: 181 SKKIDLLLNLSASPYTFKKFKLRNKISSFAAQYLNVPLVYINQVGANDDLIFDGNSFIIN 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE F+ + + L SD S+ ++A VL ++ Sbjct: 241 KNGSKIKQLKSFSEDTFIWNINENLNLVTEKKSSDISS------------VFDALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +IGLSGGIDSAL + IA ALG EN+ + +P K++S S DA + Sbjct: 289 DYAKKCGFRSALIGLSGGIDSALVSVIATAALGHENIFCVSMPSKWSSNHSKIDAKDLVE 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + + I ++++ F + + G+ +NIQSRIRG +LMAL+N K +LL Sbjct: 349 RLNVNLNTISIENIMSSFEDSFLESFNFKVEGVTNQNIQSRIRGTLLMALANQEKHLLLA 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI-----TSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L +W +S L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCNWLDSEDSLERRKAYKLDTKVKI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I I +K+PSAEL P+Q D +SLPPY +LD I+K I+E ++ +Q + + + + Sbjct: 469 IGDQIRKKAPSAELGPNQLDTDSLPPYSLLDKILKGIIEEKKDLQLLEQDGHTKKQILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QAP K++++S G D PI+ + Sbjct: 529 ITLIKKAEFKRKQAPPILKLSSQSLGSDWRVPIAISY 565 >gi|126179381|ref|YP_001047346.1| NAD+ synthetase [Methanoculleus marisnigri JR1] gi|125862175|gb|ABN57364.1| DNA-directed RNA polymerase, subunit H [Methanoculleus marisnigri JR1] Length = 529 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 196/560 (35%), Positives = 289/560 (51%), Gaps = 39/560 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI++ Q+N VVGD+AGN + EA R DLI+ EL ++G PP DL+ + FI Sbjct: 1 MKISLLQVNTVVGDLAGNAGRIAAGTREAARHRPDLIVAPELSLTGCPPRDLLLQAGFIT 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLPNY 120 + +D L + D ++VGF + G + N+ +L G + K + Sbjct: 61 RSLAVLDDLAAGLADAPP-VLVGFAEPNPAGTGRPLFNAAALLRDGEVRGTFRKTAIS-- 117 Query: 121 SEFHEKRTFISGYSNDPIVFRDIR-LGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 F E R F + R +G+ I E+I + + + +L+ASP+ Sbjct: 118 GSFDEGRYFEPAAGSPGTFHLGERTVGVAIGEEIRCGGEVP--------DVIVNLSASPF 169 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQ 239 + R E+ + + I+ N VGG D+L+FDG S F L + F+E+ Sbjct: 170 VIGRQCLREEMFSRAAKENRVAIVSANLVGGNDDLVFDGRSVAFSADGTLIARGAAFAEE 229 Query: 240 NFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + + E + A VL RDYV K F V +GL Sbjct: 230 IVTIDL-----------ARPAPQAVAPDDQGPESEIWRALVLGTRDYVHKCGFRSVHLGL 278 Query: 300 SGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 SGGIDS+L AA+A ALG+ENV ++LP +TS +S+EDA A LG + +PI ++ Sbjct: 279 SGGIDSSLVAAVAARALGQENVLGVLLPSPHTSAESIEDARELAANLGIRVQCIPIAPMM 338 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F S ++ I EN+Q+RIR +LMAL+N +MLL+T NKSE++VGY TLY Sbjct: 339 EAFDSGLADVFAGLAPDITEENLQARIRATVLMALANKFGSMLLSTGNKSEVAVGYCTLY 398 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD 479 GD +GG + + D+ K V+++A W N+ VIP +L+K PSAELRP QTD Sbjct: 399 GDAAGGLSVIADVPKGMVYRIARWLNAERP---------VIPERVLKKPPSAELRPGQTD 449 Query: 480 QESLPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKI 538 QE LPPY +LD I+ R+++ ES Y +ETVR V ++ +E+KRRQAP G K+ Sbjct: 450 QEILPPYDLLDAILHRLIDCLESPDEIIAAGYPEETVREVAGMVERAEFKRRQAPPGIKV 509 Query: 539 TAKSFGRDRLYPISNK--FR 556 T ++F D PI+ K +R Sbjct: 510 TDRAFSTDWHMPIAAKPWWR 529 >gi|332295837|ref|YP_004437760.1| NAD+ synthetase [Thermodesulfobium narugense DSM 14796] gi|332178940|gb|AEE14629.1| NAD+ synthetase [Thermodesulfobium narugense DSM 14796] Length = 552 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 197/567 (34%), Positives = 291/567 (51%), Gaps = 38/567 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI I Q+NP++G+ N + A ++ DL++ E+ ++GYPP+DL+ + +F + Sbjct: 1 MKIVIGQVNPIIGNFEYNFKLIQDAYKKGLEVNADLVVLPEMVVTGYPPKDLLERDNFCK 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFP---RQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + T D I+ G + + N ++ II KI LP Y Sbjct: 61 RAFKYNELIVDLTKD--IPILFGSIQENDKVGRKIYNVGILAKNRKIIGCARKILLPYYD 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICEDIWK-------------NSNICKHLKKQGA 168 F E R F G S I + + I ICED+W +CK+ KQ Sbjct: 119 VFDETRYFEPGDSPFFINIANKNILITICEDLWGLGKEGYLYGKNPIKDALCKNKDKQKI 178 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 + +++ASPY++ K +R EI + ++YVN VG DELIFDGASF + Sbjct: 179 DLAINISASPYHYMKFNQRKEIFSNITKEFKFDLLYVNCVGANDELIFDGASFFMTSMGE 238 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQ 288 L + F E + S + E Y A V L++Y + Sbjct: 239 LRYLASFFEEDISYLDTDIISFESHS----------LNENFDVTELMYKALVFGLKEYGK 288 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K NF+ ++GLSGGIDS+L A IA DA G +NV +++ Y S +SLEDA +K L Sbjct: 289 KTNFNGAVLGLSGGIDSSLTACIACDAFGSDNVMGLIMNSPYNSKESLEDALELSKNLNI 348 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + ++PI L+ + ++ + + EN+Q+RIRGN+LMA+SN +LL+T NK Sbjct: 349 RSVIIPIEPLMKSYDESLADIFKGYKKDVTEENLQARIRGNLLMAVSNKFGKLLLSTGNK 408 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE++VGY TLYGD++GG + D+YK V+++A W NS VIP + K Sbjct: 409 SEMAVGYTTLYGDLAGGLAVISDVYKEDVYKIARWINSKKK---------VIPERVFIKK 459 Query: 469 PSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEY 527 PSAELRP Q DQE LPPY ILD I+K +E +S ++ TV V ++ +EY Sbjct: 460 PSAELRPGQYDQEKLPPYEILDKILKLFIEEAKSINEIISYGFDRNTVTEVVSMVIKNEY 519 Query: 528 KRRQAPVGTKITAKSFGRDRLYPISNK 554 KRRQAP K+T K+FG R YPI+ + Sbjct: 520 KRRQAPPTLKVTGKAFGYGRRYPIAMR 546 >gi|91070196|gb|ABE11117.1| carbon-nitrogen hydrolase:NAD+ synthase [uncultured Prochlorococcus marinus clone HF10-11D6] Length = 565 Score = 505 bits (1300), Expect = e-140, Method: Composition-based stats. Identities = 212/577 (36%), Positives = 318/577 (55%), Gaps = 38/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A+ D +L EL + GYP DL+FKK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILNIASKASSISADFVLTPELSLWGYPANDLLFKKNLIE 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 +D L D H G I +G + + + NS+ +++ G + KI LP Sbjct: 61 NQYQILDQLALDIHKKYGNLSISIGIAEKVNDSFFPNLYNSIALVEGGEWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIV----FRDIRLGILICEDIWKNSN----------ICKHLK 164 Y F EKR F S ++ + RLG ICED+W N N LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLIKQIKNKTWRLGFTICEDLWVNKNIEGRGIHRKNPIIDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R +I + ++ +P+IYVNQ+G D LIFDG SF D Sbjct: 181 KKKVDILVNLSASPYTLKKLELRSKISSFAAQYLQVPLIYVNQIGANDNLIFDGNSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE ++ W +Q + N + E + ++A VL ++ Sbjct: 241 KNGSKIKQLKSFSED--LSSWEIEQTKPEKNEFKN----------SEMSSIFDALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F ++GLSGGIDSAL +AIA ALG +NV + +P K++S S DA A+ Sbjct: 289 DYAKKCGFKTALVGLSGGIDSALVSAIATAALGSDNVYCVSMPSKWSSSHSKSDAKDLAR 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + +PI +L+ F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLKISFKSIPIENLITSFEESFIKTISFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L W +S + L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCDWLDSEDSINSRKLYMLDTSVDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I +I +K+PSAEL P+Q D +SLPPY +LD I+K I+E ++ ++ + + + + Sbjct: 469 IGENIRKKAPSAELGPNQLDTDSLPPYSVLDKILKGIIEEKKDLQQLEEDGFKKDLILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QAP K++++S G D PI+ + Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRVPIAISY 565 >gi|157414047|ref|YP_001484913.1| NAD synthase [Prochlorococcus marinus str. MIT 9215] gi|157388622|gb|ABV51327.1| NAD synthase [Prochlorococcus marinus str. MIT 9215] Length = 565 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 216/577 (37%), Positives = 320/577 (55%), Gaps = 38/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A D +L EL + GYP DL+ KK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILYIASKACSISADFVLTPELSLWGYPANDLLLKKNLIK 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 ID L D + G I +G + + NS+ +L+ G + KI LP Sbjct: 61 NQYQIIDQLALDINKKYGNLSITIGIAEIINDSFFPNLYNSIALLEGGEWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIV----FRDIRLGILICEDIW----------KNSNICKHLK 164 Y F EKR F S +V + RLG ICED+W N LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLVKKIKNKMWRLGFTICEDLWVNKDIEGRGIHKKNPIIDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG+SF D Sbjct: 181 KKKVDILINLSASPYTFQKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGSSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE+ ++ W +Q + N + E + +NA VL ++ Sbjct: 241 KNGSKIKQLKSFSEE--LSSWEINQMEPEKNKFEN----------SEMSSIFNALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +IGLSGGIDSAL +AIA ALG +NV + +P K++S S DA AK Sbjct: 289 DYAKKCGFKTALIGLSGGIDSALVSAIATAALGSDNVYCVSMPSKWSSSHSKSDAKDLAK 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L ++++PI L+ F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLNINFNIIPIEKLMTSFEDSFVKTIDFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-----HGITSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYK+ VF+L +W +S H + L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKSNVFKLCNWLDSKDSINHRKSYMLNINEDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I +I +K+PSAEL P+Q D +SLPPY ILD+I+K I+E ++ ++ + E + + Sbjct: 469 IGENIRKKAPSAELGPNQLDTDSLPPYSILDNILKGIIEEKKDLKQLEEYGFKKELILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QAP K++++S G D PI+ + Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRIPIAISY 565 >gi|197120716|ref|YP_002132667.1| NAD+ synthetase [Anaeromyxobacter sp. K] gi|196170565|gb|ACG71538.1| NAD+ synthetase [Anaeromyxobacter sp. K] Length = 569 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 201/575 (34%), Positives = 296/575 (51%), Gaps = 26/575 (4%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M + +IA+AQ+N VGD AGN A+ R A E A G L +F EL + GYPP DL+ Sbjct: 1 MARSGRIALAQVNTTVGDFAGNAARVRAAAEVAREAGAALAVFPELTVCGYPPRDLLDLP 60 Query: 61 SFIQACSSAIDTLKS-DTHDGGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKI 115 F++ A++ L G +VVGFP V N+ ++ G ++AV K Sbjct: 61 DFLERARQALEELARPAAWSKGIALVVGFPEAPAGAPPPGVYNAAALISDGRVVAVGRKS 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR---DIRLGILICEDIWKNS----------NICKH 162 LP Y F E R F+ ++ + LG+ +CEDIW + + Sbjct: 121 LLPTYDVFDETRYFLPAGASTTAAAPEGLGVPLGLSVCEDIWNDQRFWERPRYARDPIAD 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFC 222 L + GA + +++ASPY K R +++ PI YVNQVGG D L+FDG S Sbjct: 181 LVRAGAGLVVNVSASPYAMGKAPLRERMLSASARDHGAPIAYVNQVGGNDALLFDGGSML 240 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLS 282 + + F E + + L+ + + A V+ Sbjct: 241 LARDGAVLARAPLFQEAVLVCDLEGGAPLALGLDGRPLPPPAPPPADPQADEVLRALVMG 300 Query: 283 LRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAAC 342 +RDYV+K F + ++GLSGGIDSAL A IA +ALG ENV + +P +Y+S S EDAA Sbjct: 301 VRDYVRKCGFRQAVVGLSGGIDSALTACIAAEALGAENVLGVAMPSRYSSGHSREDAAEL 360 Query: 343 AKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 A+ LG ++ + I + F + ++ + +N+Q+R+RG ILMA+SN + A++ Sbjct: 361 ARNLGVRFREIGIEPMHAAFLAALAADGAPPLCDLADQNVQARVRGQILMAISNDTGALV 420 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 LTT NKSEI+VGY TLYGDM+GG + D+ KT V+ + ++P Sbjct: 421 LTTGNKSEIAVGYCTLYGDMAGGLAAIGDVPKTLVY-------RVARAANARAGRTLVPE 473 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHL 521 K PSAEL+P Q DQ+SLPPY +LDDI++ VE + +++ TVR V + Sbjct: 474 RTFTKPPSAELKPGQLDQDSLPPYDVLDDILQAYVEERRPLEAIVARGHDEATVRRVLRM 533 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 + SEYKRRQA K++ K+FG R +PI+ +R Sbjct: 534 VVQSEYKRRQAAPVLKVSEKAFGEGRRFPIAQGYR 568 >gi|37522156|ref|NP_925533.1| NH(3)-dependent NAD(+) synthetase [Gloeobacter violaceus PCC 7421] gi|35213156|dbj|BAC90528.1| NH(3)-dependent NAD(+) synthetase [Gloeobacter violaceus PCC 7421] Length = 540 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 191/563 (33%), Positives = 292/563 (51%), Gaps = 36/563 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ QLN VGD+ GN + RA EA G DL + EL + GYPP DL+ ++F+ Sbjct: 1 MRVALLQLNSTVGDLVGNAGRIERAAREAAAAGADLAITHELALPGYPPRDLLLDRAFVA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVG--FPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 L G ++VG P + N+ ++L+ G K LP Y Sbjct: 61 DVQQTAQRLAHALA-GVVPVLVGTAVPSAVGRPLANAALLLEGGECRETVLKGLLPTYDI 119 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQGAEFLF 172 F E R F +G PI + +G+ +CEDIW + + L QGA +L Sbjct: 120 FDEDRYFEAGQRAYPIEIAGVAMGVHVCEDIWNDREFWPRPRYRRDPVEELAGQGARYLL 179 Query: 173 SLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQ 232 +L++SP+Y K + R ++ LP++YVNQVGG DEL+FDG S FDG+ +L + Sbjct: 180 NLSSSPFYAGKQQLRERLLAHAARRHRLPVLYVNQVGGNDELLFDGRSCVFDGEGRLTAR 239 Query: 233 MKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNF 292 + F+E + + A + E + A V+ DY +K F Sbjct: 240 ARAFAEDMLLVDLD-------------SLAGRIEPQPTGEAEIWEALVMGTADYARKCGF 286 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + ++ LSGGIDSAL AI ALG NV +M+P Y+S S++D+ A A LG + Sbjct: 287 QQGLVALSGGIDSALTLAIVAAALGPVNVLAVMMPSPYSSAGSIDDSLALAANLGVETLK 346 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 LPI + F +++ + + + EN+Q+RIRG ++MALSN ++ T NKSE + Sbjct: 347 LPIAPAMAAFDQILAPAFADLAADVTEENLQARIRGTLMMALSNKWNRLVFITGNKSETA 406 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VG+ TLYG +G + DLYK +V++LA W N G VIP IL K+PSAE Sbjct: 407 VGFNTLYGCTAGALAVIADLYKGEVYRLAHWLNRDGA---------VIPEGILTKAPSAE 457 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVENEESFINND-QEYNDETVRYVEHLLYGSEYKRRQ 531 LRP Q D + LPPY +LD I++ +E + + Y+ E ++ V ++ +E+KR+Q Sbjct: 458 LRPDQRDSDILPPYDVLDGILRAHLEGGRTPEEIAGEGYHPEVIKKVLAMVRRAEFKRKQ 517 Query: 532 APVGTKITAKSFGRDRLYPISNK 554 P G +++ ++FG PI++ Sbjct: 518 LPPGLRVSPRAFGIGWRMPIAHA 540 >gi|33862002|ref|NP_893563.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640370|emb|CAE19905.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 565 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 206/574 (35%), Positives = 302/574 (52%), Gaps = 38/574 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IAQLNP+VGD+ GN K +A D++L EL + GYP +DL+ KK+ I+ Sbjct: 1 MNFFIAQLNPIVGDLEGNAKKILTETGKAYSNCADMVLTPELSLWGYPAKDLLLKKNLIE 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 S +D L G + VG + + + NS+V+++ G + KI LP Sbjct: 61 RQYSILDQLSISIFKKYGNLSVAVGIAEKIDDSFFPNLYNSIVLIERGKWKTIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIV----FRDIRLGILICEDIWKNSN----------ICKHLK 164 Y F EKR F S I + +LGI ICED+W N N LK Sbjct: 121 TYEVFDEKRYFRSEQRVSVISKTIKNKTYKLGITICEDLWVNENIEGRGIHKKNPIIDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 + + L +L+ASPY K R++I + ++ +P+IYVNQ+G D+LIFDG SF + Sbjct: 181 SKKIDLLLNLSASPYTFKKFNLRNKISSFAAKYLQVPLIYVNQIGANDDLIFDGNSFIMN 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE + + + L S E + ++A VL ++ Sbjct: 241 KNGSKIKQLKSFSEDTSSWDINENLNLVDEKISS------------EISSVFDALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +IGLSGGIDSAL + IA ALG E + + +P K++S S DA Sbjct: 289 DYAKKCGFRSALIGLSGGIDSALVSVIATAALGSEKIFCVSMPSKWSSEHSKIDAKDLVA 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L + + I ++++ F + L + GI +NIQSRIRG +LMAL+N +LL+ Sbjct: 349 RLNINLNTISIENIMSSFEKSFIESLNFKTEGITNQNIQSRIRGTLLMALANQENHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRN-----SHGITSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYKT VF+L W + H L ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCRWLDSKDSIEHRKAYKLDTKVKI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I I K PSAEL P Q D +SLPPY +LD I+K I+E ++ +Q + E + + Sbjct: 469 IGDQICNKPPSAELGPDQLDTDSLPPYSLLDKILKGIIEEKKDLQLLEQDGHTKEQILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPIS 552 L+ +E+KR+QAP K++++S G D PI+ Sbjct: 529 ITLIKKAEFKRKQAPPILKLSSQSLGSDWRVPIA 562 >gi|148240345|ref|YP_001225732.1| glutamine-dependent NAD(+) synthetase [Synechococcus sp. WH 7803] gi|147848884|emb|CAK24435.1| glutamine-dependent NAD(+) synthetase [Synechococcus sp. WH 7803] Length = 577 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 209/579 (36%), Positives = 305/579 (52%), Gaps = 33/579 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQG---MDLILFTELFISGYPPEDLVFKKS 61 ++IA+AQ+NPVVGD+ GN + A G DL++ EL + GYPP DL+F + Sbjct: 1 MRIALAQINPVVGDLLGNADRIHAALAATEVNGKVSADLLVTPELSLWGYPPRDLLFSAA 60 Query: 62 FIQACSSAIDTLKSD--THDGGAGIVVG----FPRQDQEGVLNSVVILDAGNIIAVRDKI 115 ++ A+D L+ ++VG P Q + N++ ++ A V K Sbjct: 61 HLEQQQQALDQLQQRLHAEQLDVALLVGVAEVAPDQQHPRLFNALALVQARGWQVVARKQ 120 Query: 116 NLPNYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIWKN----------SNICK 161 LP+Y F E R F + S + R D +LG+ ICED+W + + Sbjct: 121 LLPSYDVFDETRYFRASSSPSTLSLRVNNRDWQLGLSICEDLWVDEELHGQRLVGPDPIA 180 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASF 221 L + + L + +ASP+ K RHE+ + P++YVNQVGG DELIFDGASF Sbjct: 181 SLIPERLDALINCSASPFSRRKGTLRHELAARAAERLQCPVVYVNQVGGNDELIFDGASF 240 Query: 222 CFDGQQQLAF-QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACV 280 Q+ F+ TE + + P + EA + V Sbjct: 241 VIAPGDDTPLLQLPEFA---VSTEVWTAASSTDRLEQPSRAHQQANTPDDDLEALFRGLV 297 Query: 281 LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAA 340 ++DY K F ++GLSGGIDSAL A IA ALG ++VQ++++P ++S S+ DA Sbjct: 298 TGVKDYATKCGFKAALLGLSGGIDSALVAVIAAAALGPDHVQSLLMPSPWSSSGSIADAL 357 Query: 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKA 400 A A LG ++PI L+ F + ++ L EPSGI AEN+QSRIRG +LMA++N Sbjct: 358 ALATRLGIASQIVPIQTLMEGFEATLTPALNAEPSGITAENLQSRIRGTLLMAMANQQGQ 417 Query: 401 MLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGP 455 +LL+T NKSE++VGY TLYGDM+GG + DLYK+ VF L W +S + GLG Sbjct: 418 LLLSTGNKSELAVGYCTLYGDMNGGLAVIGDLYKSTVFALCHWLDSPDAGACRAELGLGG 477 Query: 456 LTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQEYNDET 514 +I +ILEK PSAELRP Q D +SLP Y LD ++ ++E S ++ + Sbjct: 478 SGPLIGQAILEKPPSAELRPDQKDSDSLPDYERLDPLLMDLIEQRMSGEQLIGAGHDPDD 537 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 V+ +E L +E+KRRQAP K++ ++FG PI+ Sbjct: 538 VKRIERLFRRAEFKRRQAPPLLKVSKQAFGSGWRLPIAA 576 >gi|254525359|ref|ZP_05137411.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9202] gi|221536783|gb|EEE39236.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus str. MIT 9202] Length = 565 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 217/577 (37%), Positives = 321/577 (55%), Gaps = 38/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K +AQ+NPVVGD+ GN K +A D +L EL + GYP DL+ KK+ I+ Sbjct: 1 MKFLLAQINPVVGDLEGNAKKILYIASKACSISADFVLTPELSLWGYPANDLLLKKNLIK 60 Query: 65 ACSSAIDTLKSDTHD--GGAGIVVGFPRQDQEG----VLNSVVILDAGNIIAVRDKINLP 118 ID L D + G I VG + + NS+ +L+ G + KI LP Sbjct: 61 NQYQIIDQLALDINKKYGNLSITVGIAEIINDSFFPNLYNSIALLEGGEWKIIARKIILP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFR----DIRLGILICEDIW----------KNSNICKHLK 164 Y F EKR F S +V + RLG ICED+W N LK Sbjct: 121 TYEVFDEKRYFRSEEKVSVLVKKVKNKMWRLGFTICEDLWVNKDIEGRGIHKKNPIVDLK 180 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFD 224 K+ + L +L+ASPY KL+ R ++ + ++ +P+IYVNQ+G D LIFDG+SF D Sbjct: 181 KKKVDILINLSASPYTFKKLELRSKVSSFAAQYLQVPLIYVNQIGANDNLIFDGSSFILD 240 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLR 284 Q+K FSE+ ++ W +Q + N + E + +NA VL ++ Sbjct: 241 KNGSKIKQLKSFSEE--LSSWEINQIEPEKNKFEN----------SEMSSIFNALVLGVK 288 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAK 344 DY +K F +IGLSGGIDSAL + IA ALG +NV + +P K++S S DA AK Sbjct: 289 DYAKKCGFKTALIGLSGGIDSALVSVIATAALGSDNVYCVSMPSKWSSSHSKSDAKDLAK 348 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 L ++++PI +L+ F + + E + I +NIQSRIRG +LMAL+N K +LL+ Sbjct: 349 RLNINFNIIPIENLMTSFEESFIKTIDFEMAEITNQNIQSRIRGTLLMALANQEKHLLLS 408 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS-----HGITSGLGPLTEV 459 T NKSE++VGY TLYGDM+GG + + DLYK+ VF+L +W +S H + L + ++ Sbjct: 409 TGNKSELAVGYCTLYGDMNGGLSVIGDLYKSNVFKLCNWLDSKDSINHRKSYMLDIIEDI 468 Query: 460 IPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYV 518 I +I +K+PSAEL P+Q D +SLPPY ILD+I+K I+E ++ ++ Y E + + Sbjct: 469 IGENIRKKAPSAELGPNQLDTDSLPPYSILDNILKGIIEEKKDLKQLEEYGYKKELILKI 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 L+ +E+KR+QAP K++++S G D PI+ + Sbjct: 529 ISLIKKAEFKRKQAPPILKLSSQSLGSDWRIPIAISY 565 >gi|87301245|ref|ZP_01084086.1| putative glutamine dependent NAD(+) synthetase [Synechococcus sp. WH 5701] gi|87284213|gb|EAQ76166.1| putative glutamine dependent NAD(+) synthetase [Synechococcus sp. WH 5701] Length = 568 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 198/574 (34%), Positives = 293/574 (51%), Gaps = 33/574 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+AQ+NP+VGD+ GN A+ + A G DL++ EL + GYPP DL+ + S + Sbjct: 1 MRLALAQINPLVGDLRGNAAQLLEHSQRAALAGADLVISPELSLWGYPPRDLLLRPSLLL 60 Query: 65 ACSSAIDTLKSDTHDGGAGI---VVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ L ++ G + V ++ + N+ ++ G+ V K LP+Y Sbjct: 61 EQGRVLEALAAELPPGLGLLLGLVDPIAGRELPALYNAAALVQRGSWRVVARKRLLPSYD 120 Query: 122 EFHEKRTFISGYSNDPIVFRD----IRLGILICEDIWKNS----------NICKHLKKQG 167 F E+R F G + + RLG+ ICED+W + L Q Sbjct: 121 VFDERRYFQPGDQACLLEWPGADRVWRLGLTICEDLWVEERVQGHRLAGADPIAELAPQR 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + L +L+ASP+ K + R E+ + + P++YVNQVGG DEL+FDG SF D Q Sbjct: 181 PDLLLNLSASPFAQGKPELRLELAGAAAARLGCPVVYVNQVGGNDELVFDGGSFVIDPQA 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 ++ Q+ + E + A+ E + VL + DY Sbjct: 241 RVLRQLPCAQVALELWEPDL---------LDTAPAAPASPAPPPLEQLFRVLVLGVHDYA 291 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 +K F +V++GLSGGIDSAL A IA ALG E VQ +++P Y+S S DA A LG Sbjct: 292 RKCGFQRVVLGLSGGIDSALVAVIAAAALGPEQVQALLMPSPYSSAGSRLDAIDLANRLG 351 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSN 407 + + I L+ F + P G+ AEN+QSRIRG +LMA++N +LL+T N Sbjct: 352 LPHQTVAIKTLMEAFDHSLDPVFGGAPQGLTAENLQSRIRGTLLMAVANQQGRLLLSTGN 411 Query: 408 KSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS-----GLGPLTEVIPP 462 KSE++VGY TLYGDM+GG + DLYKT VF+L W ++ GL E+I Sbjct: 412 KSELAVGYCTLYGDMNGGLAVIGDLYKTTVFRLCHWLDTEAAADCRQSLGLPASGELIGA 471 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN--NDQEYNDETVRYVEH 520 +I K PSAELRP Q D +SLP Y LD +++ +E S + + E R V Sbjct: 472 AIRTKPPSAELRPDQRDTDSLPDYDQLDPLLRAYIEELRSPEELIVQGQVDGELARRVYR 531 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 LL +E+KRRQA K++ ++FG PI+ Sbjct: 532 LLRTAEFKRRQAAPLLKVSGRAFGGGWRMPIAAG 565 >gi|254468201|ref|ZP_05081607.1| NAD+ synthetase [beta proteobacterium KB13] gi|207087011|gb|EDZ64294.1| NAD+ synthetase [beta proteobacterium KB13] Length = 524 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 198/552 (35%), Positives = 302/552 (54%), Gaps = 31/552 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ + Q NPV+GDI N ++ D+ + EL + GYPP+DL+F K FI+ Sbjct: 1 MKVCLIQSNPVMGDIKNNFNWIKKQI---ISNDADIFIAPELALIGYPPDDLLFDKEFIK 57 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + + +++G + + NS I+ NI K LPNY F Sbjct: 58 KQEQAFNEFQPHLKNK--LLIIGGVHVKKNKIFNSAFIISQNNIKHQ-HKQCLPNYGVFD 114 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 EKR F G + ++ ++ ILICED W + ++ K + + +F +NASP+ +KL Sbjct: 115 EKRYFSPGDHQKIVTYKKKKILILICEDFW-DKDLEKKYQDKQIDFCVVINASPFEIDKL 173 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R + +IY+N VGGQD+++FDG SF + + Q+ HF + Sbjct: 174 NLRINRAKKINRKIKSNLIYLNMVGGQDDVVFDGGSFTLNKNNNICTQLDHFKCHTKLV- 232 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + S + L EE+ NAC+L +DY++KN + +GLSGGID Sbjct: 233 -------------KEFSPEKVPQSLSIEESVLNACILGTKDYIKKNKIKNIFLGLSGGID 279 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SAL A IA A+ KEN+ IM+ KYTS S++DA AK LG + + L+N Sbjct: 280 SALVAYIASKAINKENINCIMMRSKYTSKISIDDAKNLAKNLGVNFIDKNLSSLINQINL 339 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + I ENIQ+R RG ILMAL+N ++L+TSNKSE +VGY TLYGDM G Sbjct: 340 NLKDDFKNLKQDITEENIQARSRGLILMALANKKNGVVLSTSNKSESAVGYSTLYGDMVG 399 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 + P+KD+ KT +++++ + N++ +IP I+ ++PSAEL+P+QTDQ+SLP Sbjct: 400 AYAPIKDIPKTLIYKISKFINANEK---------IIPERIITRAPSAELKPNQTDQDSLP 450 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y LD II+ ++ +S + +TV+ + L+ SE+KRRQ+P G KIT+K+F Sbjct: 451 AYEELDKIIEFFIDEGQSVDEIISMGFKAQTVKKIVKLILRSEFKRRQSPPGPKITSKAF 510 Query: 544 GRDRLYPISNKF 555 GR+R +PI+N F Sbjct: 511 GRERRFPITNNF 522 >gi|148242969|ref|YP_001228126.1| glutamine-dependent NAD(+) synthetase [Synechococcus sp. RCC307] gi|147851279|emb|CAK28773.1| glutamine-dependent NAD(+) synthetase [Synechococcus sp. RCC307] Length = 558 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 206/566 (36%), Positives = 304/566 (53%), Gaps = 29/566 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+ Q NP+VGD+ GN + ++ +A G +L L EL + GYPP DL+ + + Q Sbjct: 1 MRIALIQSNPLVGDLQGNRQRLQQQCLQAAEAGAELALAPELALWGYPPRDLLLQPALRQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D L G G+++G + + N++ +++ G V K LP+Y F Sbjct: 61 QQDRQLDQLSGALPP-GFGLLLGVVETSGQKLFNAMALVERGGWRLVARKRLLPSYDVFD 119 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAEFLFSL 174 E+R F SG + + RLG+ +CED+W + L+ + L +L Sbjct: 120 EQRYFHSGDQPALLSWGGQRLGLTLCEDLWVEPQISGRNAPLCDPIAELQPLKPDLLINL 179 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 +ASP+ K ++R ++ + P++YVNQVGG DELIFDG SF D L Q+ Sbjct: 180 SASPFGQGKAERRRQLAGAAQQRLGCPVLYVNQVGGNDELIFDGNSFVLDATGALQQQLP 239 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 + + ++ T PL E + VL ++DY +K F K Sbjct: 240 CGESALQIWD------------SQSATSPTPPEPLSPEAQLWRMLVLGVQDYARKCGFRK 287 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 ++GLSGGIDSAL AA+AV ALG + V+ +++P Y+S SL+D+ A A L +P Sbjct: 288 ALLGLSGGIDSALVAALAVAALGSQQVRALLMPSPYSSEGSLQDSLALASRLNLATSTVP 347 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I L+ + S + L ++P GI AEN+QSRIRG +LMA++N +LL T NKSE++VG Sbjct: 348 IEPLMQQYDSSLDPALGQKPEGITAENLQSRIRGTLLMAVANSEGQLLLATGNKSELAVG 407 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGIT-----SGLGPLTEVIPPSILEKSP 469 Y TLYGDM+GG + DLYK++VF+L W +S GL VI +IL K P Sbjct: 408 YCTLYGDMNGGLAVIGDLYKSEVFRLTRWLDSPAAAGERQRCGLPADGPVIGDAILNKPP 467 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYND-ETVRYVEHLLYGSEYK 528 SAELRP Q D +SLP YP LD +++R +E S + V+ + LL SE+K Sbjct: 468 SAELRPDQKDSDSLPDYPYLDRLLQRFIEEHASPEELIASGEPSDAVQRIWRLLKRSEFK 527 Query: 529 RRQAPVGTKITAKSFGRDRLYPISNK 554 RRQA K++A+SFG PIS + Sbjct: 528 RRQAAPVLKLSARSFGCGWRMPISAR 553 >gi|332652501|ref|ZP_08418246.1| glutamine-dependent NAD+ synthetase [Ruminococcaceae bacterium D16] gi|332517647|gb|EGJ47250.1| glutamine-dependent NAD+ synthetase [Ruminococcaceae bacterium D16] Length = 641 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 134/644 (20%), Positives = 250/644 (38%), Gaps = 90/644 (13%) Query: 1 MLKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF 58 M++ +K+A V D N + EA++QG+ ++ EL ++GY DL Sbjct: 1 MMRDGFIKVAAGTPKIRVADCRYNAEQIFTLMREADKQGVKVLCLPELCLTGYTCGDLFL 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQ--DQEGVLNSVVILDAGNIIAVRDKIN 116 + ++ + T+ T + VG P + + N ++ G I+ + KI+ Sbjct: 61 HDTLLKGAEEGLQTILEATRNLELVAAVGLPVRAQYDNKLYNCAALIQKGEILHLVPKIH 120 Query: 117 LPNYSEFHEKRTFISGYSNDPIVFRDIR-------------------LGILICEDIWKNS 157 +PNY EF+E R F SG D V + LG+ ICED+W Sbjct: 121 IPNYGEFYEARWFASGAGVDTTVTLCGQQVCMSTNETFACQEMPNLILGVEICEDLWAPE 180 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELI 215 L + GA + +L+AS K R ++VTGQ +Y + G+ +L+ Sbjct: 181 PPSAGLARSGATIILNLSASNETVGKAAYRRQLVTGQSGRQVCGYVYADAGEGESTTDLV 240 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA------------- 262 F G + + LA + F+ ++E D+ + M+ + Sbjct: 241 FAGHNMIAENGALLAER--RFANGLTISEIDVDRLAYERRRMTSFTPDPDKEYWRGEFSL 298 Query: 263 ------------STMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + ++P E L L+ ++ + ++GLSGG+D Sbjct: 299 TLEETRLTRFVSPSPFVPQDEGDRAERCNEILCIAALGLKKRLEHTHAKTAVVGLSGGLD 358 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S L I A+ ++ + +P T+ ++ +A A+ LGC + I + V Sbjct: 359 STLAVLITAVAMQMLDRPASDIIAVTMPCFGTTDRTKSNAVLLAERLGCTLRTIDIGNAV 418 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + Q + E + EN Q+R R +LM ++N + +++ T + SE+++G+ T Sbjct: 419 KIHFKDIGQSM--EDHSVTFENGQARERTQVLMDIANQTGGLVIGTGDLSELALGWCTYN 476 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH--- 476 GD + + KT V L S+ + + IL+ S EL P Sbjct: 477 GDHMSNYAVNAGIPKTLVRHLVSFI--SDDKAQEDRQLSDVLSDILDTPVSPELLPAIEG 534 Query: 477 ---QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHL 521 Q ++ + PY + D + I+ + +Y+ T+ Sbjct: 535 KISQKTEDLVGPYELHDFFLYHILRWGFSPKKVFRLALYALGSQYDRATILKWLKNFYRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYP---ISNKFRDHIS 560 + ++KR G K+ + + D P +++ + D + Sbjct: 595 FFSQQFKRSCLSDGPKVGSVALSPRGDWRMPSDAVASLWLDELE 638 >gi|297564424|ref|YP_003683397.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848873|gb|ADH70891.1| NAD+ synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 583 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 183/595 (30%), Positives = 284/595 (47%), Gaps = 55/595 (9%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + KL+IA+AQ NP VGD+ GN +A+ G L++F E+ ++GY EDL + Sbjct: 1 MVKLRIALAQTNPTVGDLEGNCDSVVAYARQASDAGAHLVVFPEMVVTGYSVEDLALRDG 60 Query: 62 FIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQE----------GVLNSVVILDAGNI 108 F+ A + A L G G +VVGF + + NS+ +L G I Sbjct: 61 FVSASTKATHNLADRLAAEGLGHLPVVVGFLNRREGPGPRFGQPSGAPQNSLAVLHRGRI 120 Query: 109 IAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 V K +LPNY F E R F+ G + + + + ICED+W++ G Sbjct: 121 RLVSAKHHLPNYGVFDEFRYFVPGDTLPVLRLHGVDVAFAICEDLWQDGGPVTAAADAGV 180 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQ 228 L +LN SPY +K R + + + I YVN GGQD+L+F+G S D Sbjct: 181 GMLVTLNGSPYERHKDDVRLALCQRRAREIGAAIGYVNMTGGQDDLVFEGDSLVVDADGD 240 Query: 229 LAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI--------------------- 267 L + F E +T+ S D + Sbjct: 241 LVSRAPQFEEALLVTDLSLPPAESPEEPARADGFRVVRYAVTDRPSPPPGTRSPVLTPRR 300 Query: 268 -PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIML 326 P+ + Y A V +RD+V+KN F V++ +SGG DSAL A IA DA+G ENV +++ Sbjct: 301 DPMSDLGEVYTALVTGVRDHVRKNGFTSVLVSVSGGADSALTATIAADAVGAENVHALVM 360 Query: 327 PYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRI 386 P + ++ +LEDA A K G V P++ L++ S ++ + N+ ++ Sbjct: 361 PARDSTAAALEDADALIKRQGLTNRVYPVNHLLDALESTIAAADEGGTR-----NLLAQA 415 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNS 446 RG +LMALS ++L T +KSE++ G T +GD G + PLKD +KT V++LA WRN+ Sbjct: 416 RGALLMALSREEGHLVLATGDKSELATGLCTHHGDAVGAYAPLKDCWKTLVWELARWRNT 475 Query: 447 HGITSGLGPLTEVIPPSILEKSP-----SAELRPHQTDQESLPPYPILDDIIKRIVENEE 501 +G P IP L ++P + P Q P Y +LD ++ + ++ Sbjct: 476 EDARAGRTP---PIPERSLGRNPVSGWGAPGSVPAQ------PEYGVLDGLLDAYIGTDQ 526 Query: 502 SFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ + VR+V L+ +E+KRRQ P G KIT ++ GRDR PI++++ Sbjct: 527 GIAAMTAAGFDPDLVRHVVRLVDRAEHKRRQYPPGPKITKRNLGRDRRLPITSRW 581 >gi|329960868|ref|ZP_08299147.1| NAD+ synthase [Bacteroides fluxus YIT 12057] gi|328532154|gb|EGF58958.1| NAD+ synthase [Bacteroides fluxus YIT 12057] Length = 666 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 130/630 (20%), Positives = 241/630 (38%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + A+ +G+ +I F EL ++GY DL ++ ++ Sbjct: 32 VKVAAAVPRVKVADCKFNASEIEKEIIIADGKGVQIIAFPELCVTGYTCGDLFAQQLLLE 91 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 92 EAEMGLMQILNNTRQLDIISILGMPVALNGVLLNTAVVIQKGKVLGVVPKTYLPNYKEFY 151 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S N D GI ICED+W L QG Sbjct: 152 EKRWFTSACEVSETSVRLCGQIIPMGRNLLFDTADTTFGIEICEDLWAPVPPSSALALQG 211 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 212 AEILFNLSADNEGIGKHAYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 271 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 LA + F EQ ++E + ++ + +A Sbjct: 272 GSLLAAGKRFSFEEQVVISEIDVEYLRTERRVNTTFAACRSCSAPELPVHVAAEYVNSKD 331 Query: 263 --------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P + E ++ V L + +IG+SGG+DS L Sbjct: 332 LNLTRTFDPHPFVPQGATLDERCEEVFSIQVSGLAQRLVHTKAKSAVIGISGGLDSTLAL 391 Query: 310 AIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V ++ + + +P T+ ++ +A +LG + I + F Sbjct: 392 LVCVKTFDKLGWARKGIIGVTMPGFGTTDRTYTNAMDLMNSLGITVREVSIKEACIQHFK 451 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 452 DIDH--DADVHDVVYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDHMS 509 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + G+ + I++ S EL P Q Sbjct: 510 MYGVNGSVPKTLVRHLVKWVAEN----GMDEASRSTLLDIVDTPISPELIPADENGNIQQ 565 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYV----EHLLYGS 525 ++ + PY + D + + + Y++ET++ + Sbjct: 566 ITEDLVGPYELHDFFLYYFLRCGFRPAKIFFLAARTFKGVYDEETIKKWLQTFLRRFFNQ 625 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 626 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 655 >gi|296130694|ref|YP_003637944.1| NAD+ synthetase [Cellulomonas flavigena DSM 20109] gi|296022509|gb|ADG75745.1| NAD+ synthetase [Cellulomonas flavigena DSM 20109] Length = 621 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 201/614 (32%), Positives = 297/614 (48%), Gaps = 65/614 (10%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + L++A+AQL VGD+AGN A A D++L E+ + GYP EDL+ + Sbjct: 1 MTTLRVALAQLPVRVGDMAGNATALTHAVATAGSWQADVVLTPEMGVCGYPVEDLLAEPE 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPR-------------------QDQEGVLNSVVI 102 F++A +A + T ++G P + G+ N V+ Sbjct: 61 FVRAAMAATQQVARSTDR--TVALLGAPWVTGSLPGAAGARPAGSATDTRERGLRNVAVV 118 Query: 103 LDAGNIIAVRDKINLPNYSEFHEKRTFISGYSN----DPIVFRD-IRLGILICEDIWKNS 157 G + K LP YS F + R +G + + + G+L+CED+W ++ Sbjct: 119 AQGGQVHGAHAKTLLPTYSVFDDARHVEAGPAQQDLYRVLTPEGPVTFGVLVCEDVWSDA 178 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFD 217 + + +++ GA+ + LNASPY+ K + R V +PI YVN VGGQDEL+FD Sbjct: 179 -LVQEVRRGGAQAVVVLNASPYHVGKQRLREAAVAAAARSAGVPIAYVNAVGGQDELVFD 237 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTE----------WHYDQQLSQWNYMSDDSASTMYI 267 G SF DG + + + F+ + W + Sbjct: 238 GGSFAVDGDGVVVARGRSFATDLVTVDLPVAAEVDPSWDVVDLGVTHTERCPLPPPPLTA 297 Query: 268 PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLP 327 P + + Y A V RDY + +V++GLSGGIDSAL A IAVDALG + V + +P Sbjct: 298 PREVHDEVYTALVTGFRDYCTRVGLPQVVLGLSGGIDSALAATIAVDALGPDAVWGVGMP 357 Query: 328 YKYTSPQSLEDAAACAKALGCKYDVLPIHDLV----NHFFSLMSQFLQEEPSGIVAENIQ 383 Y+S S++DA A A LG ++DV+PI D L++ + EN+Q Sbjct: 358 GPYSSGGSVDDARALADNLGIRFDVVPITDAYLERHRVLAGLLTDRTGATGQPVAWENLQ 417 Query: 384 SRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG-GFNPLKDLYKTQ------ 436 +R+RG LM L+N + A++ TT N+SE +VGY TLYGD G NPL DL KT Sbjct: 418 ARLRGTTLMTLANATGALVCTTGNRSESAVGYFTLYGDSCGTAPNPLGDLLKTTVTLRDG 477 Query: 437 -----VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDD 491 V+ LA WRN +G P IP + L K SAEL P Q D +SLPPYP+LD Sbjct: 478 TVLPGVYGLAQWRNDRAAAAGQAP---PIPAATLTKPASAELAPGQQDSDSLPPYPVLDR 534 Query: 492 IIKRIVENEESFIN-----NDQEYNDE----TVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 ++ +E+ S ++ + TV V L+ SE+KRRQ P+ K++ + Sbjct: 535 LLLAFLEDHASARELAGSLVADGWDPQAAAGTVDRVLTLVDRSEFKRRQVPIRIKVSRLA 594 Query: 543 FGRDRLYPISNKFR 556 FGRDR P++N + Sbjct: 595 FGRDRRMPLANHWS 608 >gi|281423268|ref|ZP_06254181.1| glutamine-dependent NAD+ synthetase [Prevotella oris F0302] gi|281402604|gb|EFB33435.1| glutamine-dependent NAD+ synthetase [Prevotella oris F0302] Length = 642 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 130/633 (20%), Positives = 248/633 (39%), Gaps = 92/633 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + +A +G+++++F EL I+GY +DL + + Sbjct: 6 IKVASAIPSVKVGDVKYNTLQIENLIVQAESRGVEIVVFPELSITGYTCQDLFRQTLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ L + +VG P +LN ++L G I+ + K LPNY+EF+ Sbjct: 66 ATDTAVMMLLDFSRKLNVISIVGAPILVGNLLLNCALVLQQGEILGIIPKTYLPNYNEFY 125 Query: 125 EKRTFISGYSNDPIVFR-------------------DIRLGILICEDIWKNSNICKHLKK 165 EKR F S P R ++ G+ ICED+W L Sbjct: 126 EKRWFASSQDLRPTEIRYAGHKLLVSADPKLFVTSQGVKFGVEICEDVWAPIPPSNRLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+A+ K K ++ Q + + +Y + G+ ++++ G + + Sbjct: 186 SGADIIFNLSATNELIGKHKYLKSLLAQQSARMMSGYVYSSCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFSE--QNFMTEWHYDQQLSQWN-------------------------- 255 + L + + FS Q +++ ++ + + Sbjct: 246 EN-GVLLAEGERFSLTPQLVVSQIDVERLRVERSNNTTFVNAQRQGIMNGSEVWCHGIDA 304 Query: 256 ----YMSDDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + +IP + E +N VL L + V++G+SGG+DS Sbjct: 305 KTDFCLERTIDPCPFIPQDDGLTTSCEEIFNIQVLGLAKRLVHTGCKHVVLGISGGLDST 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + + + ++ + + +P T+ ++ ++A ++L +PI V Sbjct: 365 LALLVCIRTFDKLQMDRKGIIGVTMPGFGTTDRTYQNAIQLMESLNITIREIPIAKSVTQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + + EN Q+R R ILM LSN M++ T + SE+++G+ T GD Sbjct: 425 HFEDIGHDM--TIHDVTYENGQARERTQILMDLSNQVGGMVIGTGDLSELALGWATYNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH----- 476 + + KT + L + + + I I++ S EL P Sbjct: 483 HMSMYGVNASVPKTLIQYLMRYVATTMSSR-----VSDILMDIIDTPISPELIPADAGNT 537 Query: 477 --QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLL 522 Q ++ + PY + D + + + Y+DE ++ Sbjct: 538 ICQKTEDLVGPYELHDFFLYYFLRFGFRPRKIFMLAQKAFAGHYDDEVIKKWLTTFCRRF 597 Query: 523 YGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 598 FSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 630 >gi|299140492|ref|ZP_07033630.1| glutamine-dependent NAD+ synthetase [Prevotella oris C735] gi|298577458|gb|EFI49326.1| glutamine-dependent NAD+ synthetase [Prevotella oris C735] Length = 642 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 130/633 (20%), Positives = 248/633 (39%), Gaps = 92/633 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + +A +G+++I+F EL I+GY +DL + + Sbjct: 6 IKVASAIPSVKVGDVKYNTLQIENLIVQAESRGVEIIVFPELSITGYTCQDLFRQTLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ L + +VG P +LN +++ G I+ + K LPNY+EF+ Sbjct: 66 ATDTAVMMLLDFSRKLNVISIVGAPILVGNLLLNCALVIQQGEILGIIPKTYLPNYNEFY 125 Query: 125 EKRTFISGYSNDPIVFR-------------------DIRLGILICEDIWKNSNICKHLKK 165 EKR F S P R ++ G+ ICED+W L Sbjct: 126 EKRWFASSQDLRPTEIRYAGHKLLVSADPKLFVTSLGVKFGVEICEDVWAPIPPSNRLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+A+ K K ++ Q + + +Y + G+ ++++ G + + Sbjct: 186 SGADIIFNLSATNELIGKHKYLKSLLAQQSARMMSGYVYSSCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFSE--QNFMTEWHYDQQLSQWN-------------------------- 255 + L + + FS Q +++ ++ + + Sbjct: 246 EN-GVLLAEGERFSLTPQLVVSQIDVERLRVERSNNTTFVNAQRQGVMNGSEVLCHGIDA 304 Query: 256 ----YMSDDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + +IP + E +N VL L + V++G+SGG+DS Sbjct: 305 KTDFCLERTIDPCPFIPQDDGLTTSCEEIFNIQVLGLAKRLVHTGCKHVVLGISGGLDST 364 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + + + ++ + + +P T+ ++ ++A ++L +PI V Sbjct: 365 LALLVCIRTFDKLQMDRKGIIGVTMPGFGTTDRTYQNAIQLMESLKITIREIPIAKSVTQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + + EN Q+R R ILM LSN M++ T + SE+++G+ T GD Sbjct: 425 HFEDIGHDM--TIHDVTYENGQARERTQILMDLSNQVGGMVIGTGDLSELALGWATYNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH----- 476 + + KT + L + + + I I++ S EL P Sbjct: 483 HMSMYGVNASVPKTLIQYLMRYVATTMSSR-----VSDILMDIIDTPISPELIPADADNT 537 Query: 477 --QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLL 522 Q ++ + PY + D + + + Y+DE ++ Sbjct: 538 ICQKTEDLVGPYELHDFFLYYFLRFGFRPRKIFMLAQKAFAGHYDDEVIKKWLTTFCRRF 597 Query: 523 YGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 598 FSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 630 >gi|291550637|emb|CBL26899.1| NAD+ synthetase [Ruminococcus torques L2-14] Length = 638 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 134/631 (21%), Positives = 242/631 (38%), Gaps = 86/631 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K +K+A A + V D+ N A EEA + G +++F EL ++GY DL Sbjct: 1 MKNGFVKVAAATPDIRVADVEFNTQNIINAMEEAQKNGAKILVFPELCVTGYTCSDLFDH 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 ++A A+ + +T+D + VG P + + N ++ G II K LPN Sbjct: 61 SVLLKASRKALLEIAENTNDKDMLVFVGAPLEVNGKLYNVAAAMNQGEIIGFTTKTFLPN 120 Query: 120 YSEFHEKRTFISGYSN-DPIVFRDIRL------------------GILICEDIWKNSNIC 160 Y EF+E R F G I F ++ ICED+W Sbjct: 121 YGEFYEMRQFTPGPQTVREITFEGKKIPFGPQILFQAEGMEELVVAAEICEDVWSPVPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 +GA + + +AS K R +++GQ + + IY N G+ +L+F G Sbjct: 181 IQAALEGATVIVNCSASDETIGKDTYRRALISGQSARLISGYIYANAGEGESTTDLVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN----------------------- 255 + + L ++ +E +E + + Sbjct: 241 HNIIAENGTVLKESSRYVNE-IIYSELDLQRITGERRKNTTFQPLDEETLVRVPFTVEET 299 Query: 256 --YMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 +++ ++P E E + L+ + N ++G+SGG+DS L Sbjct: 300 KTFLTRTFPKKPFVPSDEQTRAQRCEEILTIQAMGLKKRLAHTNARTAVVGISGGLDSTL 359 Query: 308 CAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + A K+++ + +P T+ ++ ++A +K +G +PI D VN Sbjct: 360 ALLVTARAFDMLGRDKKDIIAVTMPCFGTTDRTYQNACEMSKKVGATLIEVPIADAVNVH 419 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + E + EN Q+R R +LM ++N + M++ T + SE+++G+ T GD Sbjct: 420 FRDIGH--DPEDHSVTYENCQARERTQVLMDIANKTWGMVIGTGDLSELALGWATYNGDH 477 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------H 476 + + KT V L + L + +L+ S EL P Sbjct: 478 MSMYGVNASVPKTLVRHLVKYAADDTKDEALKN----VLYDVLDTPVSPELLPPKDGDIA 533 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + ++ + + D EY+ ET+ + Sbjct: 534 QKTEDLVGPYELHDFFLYFMLRFGYEPSKIFRIACMTFDGEYDKETIFKWLETFCRRFFS 593 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + D P Sbjct: 594 QQFKRSCLPDGPKVGTVALSPRGDWRMPSDA 624 >gi|160932915|ref|ZP_02080304.1| hypothetical protein CLOLEP_01756 [Clostridium leptum DSM 753] gi|156867989|gb|EDO61361.1| hypothetical protein CLOLEP_01756 [Clostridium leptum DSM 753] Length = 640 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 128/626 (20%), Positives = 247/626 (39%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A A V D + N + + EA+ +G+ L++F EL I+GY DL ++ + Sbjct: 6 IKAAAATPEIRVADCSYNAGQTVKLMREASEKGVKLLVFPELCITGYTCSDLFLQRRLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + V G P ++ + N ++ G I+ V K NLPNY+EF+ Sbjct: 66 GALTALRTVMEASRKLSLLTVAGLPLTVEDKLYNCAAVIFQGEILGVVPKTNLPNYNEFY 125 Query: 125 EKRTFISGYSNDPI-------------------VFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F+ + + + ++++ + ICED+W + Sbjct: 126 EKRHFVPAPAENTVCRLFGKEVPFGSKLLFCCDTLSELKVAVEICEDLWSPIPPSNYHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R E+V GQ + IY + G+ +L+F G + Sbjct: 186 AGATIIANPSASNEVIGKDAYRKELVGGQSGRLVCGYIYASAGEGESTTDLVFSGHNLIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 + + + + F ++E + + +S A Sbjct: 246 EN-GAILAESRLFHNSLTISELDVQRLSGERRRLSSFPAVQDEGYQRIYFSLPVEKTNLT 304 Query: 263 ----STMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 +IP ++ E + L L+ ++ + ++G+SGG+DS L + Sbjct: 305 RIIDPRPFIPSEQSTLKNRCETILSIQSLGLKKRLEHSRAKTAVVGISGGLDSTLALCVT 364 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A+ + ++ I +P T+ ++ +A A+ LG + + I V F + Sbjct: 365 ARAMDLLNRPRTDIIAITMPCFGTTQRTKSNAEILAQRLGVTLERVDIAKQVLQHFEDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 ++ + EN Q+R R +LM +N + +++ T + SE+++G+ T GD + Sbjct: 425 HSPDDQ--DVTFENAQARTRTLVLMDWANQTGGLVIGTGDLSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQE 481 + KT + L S+ L + IL+ S EL P Q ++ Sbjct: 483 VNASIPKTLIRHLVSYEAEKLNDPRLKE----VLMDILDTPVSPELLPAKDGEISQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV----RYVEHLLYGSEYKR 529 + PY + D + + + + D Y+ ET+ + + ++KR Sbjct: 539 LVGPYELHDFYLYYAIRWGFSPAKVYHLARLAFDGAYDQETILKWLKTFYRRFFNQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 599 SCLPDGPKVGSVTLSPRGDWRMPSDA 624 >gi|313203753|ref|YP_004042410.1| nh(3)-dependent nad(+) synthetase [Paludibacter propionicigenes WB4] gi|312443069|gb|ADQ79425.1| NH(3)-dependent NAD(+) synthetase [Paludibacter propionicigenes WB4] Length = 631 Score = 480 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 126/627 (20%), Positives = 242/627 (38%), Gaps = 85/627 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + V D A N++ + +I F EL ++GY DL F++ + Sbjct: 6 VRVAAAIPDLRVADCAFNVSCIADLVRRGEEEKAQVICFPELSVTGYTCADLFFQQQLLS 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A++ L+ T + I+VG P + Q + N+ V+L G+I+ V K +LPN +EF+ Sbjct: 66 DAEKALNELQMLTFSTTSVIIVGMPVRVQNQLFNTAVVLQGGHILGVVPKTHLPNNNEFY 125 Query: 125 EKRTFISGYSNDP---------------IVFRDIRL--GILICEDIWKNSNICKHLKKQG 167 EKR F + ++F D + GI +CED+W G Sbjct: 126 EKRWFSPSTATGVQRITLSGEDVPFGTDLLFSDGKFSFGIELCEDLWVPIPPSSQHALHG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A+ +F+L+A+ K + +++ Q + + +Y + G+ ++++ G + Sbjct: 186 ADIIFNLSATNELIGKHQYLRQLIEQQSARCNAGYVYSSAGAGESTTDVVYAGNGIIVEN 245 Query: 226 QQQLAFQMKHFSEQNFMT---------------------------------EWHYDQQLS 252 + +A + E + + H+ Q Sbjct: 246 GKIIASSERFSFEPQLIVSDVDIERLQADRMRNTNYTNEKSDKTYRTIKLEDAHFTQFEL 305 Query: 253 QWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + + + E ++ V L + V++G+SGG+DS L + Sbjct: 306 KRTFDKHPFVPPLTNRDASCEEIFSIQVGGLAKRWKHTKAETVVVGISGGLDSTLALLVC 365 Query: 313 VD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V + ++++ I +P T+ ++ +A K+LG + I D F ++ Sbjct: 366 VKTADKLGIDRKHIFGITMPGFGTTDRTYTNALNLMKSLGITMLEISIKDACIQHFKDIN 425 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + + EN Q+R R ILM ++N +++ T + SE ++G+ T GD + Sbjct: 426 H--DPDTHDVTYENTQARERTQILMDIANKHNGLVIGTGDLSESALGWATYNGDHMSMYA 483 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQ 480 + KT V L W L +E I IL+ S EL P Q + Sbjct: 484 VNSGVPKTLVRYLVDWAAHK-----LESQSEEILRDILDTPVSPELLPADESGNIAQKTE 538 Query: 481 ESLPPYPILDDIIKRIVENEESFINN------------DQEYNDETVRYVEHLLYGSEYK 528 + + PY + D + +V S + ++ ++ + ++K Sbjct: 539 DIVGPYELHDFFLYYMVRFGFSPSKIMFLAQNAFGDIYADDVIEKWLKIFIRRFFAQQFK 598 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISN 553 R P G K+ + + D P Sbjct: 599 RSCIPDGPKVGSINLSPRGDWRMPSDA 625 >gi|167763453|ref|ZP_02435580.1| hypothetical protein BACSTE_01827 [Bacteroides stercoris ATCC 43183] gi|167698747|gb|EDS15326.1| hypothetical protein BACSTE_01827 [Bacteroides stercoris ATCC 43183] Length = 641 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 131/630 (20%), Positives = 241/630 (38%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A + V D N + + A+ +G+ +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAASVPRVRVADCKFNAGQIEKEIIIADGKGVQIIAFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G I+ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQMDIISILGMPVPLNGVLLNTAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S N D GI ICED+W L QG Sbjct: 126 EKRWFTSACEVSETTARLCGQIVPMGRNLLFETADTTFGIEICEDLWAPIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNLSADNEGIGKHAYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 LA + F EQ ++E + ++ + +A Sbjct: 246 GTLLAGSERFSFEEQVVISEIDVEHIRTERRVNTTFAACRANCAPEVPVRVSTEYVNSKD 305 Query: 263 --------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P + E ++ V L + N ++G+SGG+DS L Sbjct: 306 LNLTRVFDPHPFVPQGAALDERCEEIFSIQVSGLAQRLLHTNAKSAVVGISGGLDSTLAL 365 Query: 310 AIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V + ++ + + +P T+ ++ +A +LG + I D F Sbjct: 366 LVCVKTFDKLSWNRKGIIGVTMPGFGTTDRTHTNAVDLMASLGVTMREVSIKDACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDIN--VHDVVYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + + + I++ S EL P Q Sbjct: 484 MYGVNGSIPKTLVKHLVKWVAEN----DIDETSRATLLDIVDTPISPELIPADENGNIRQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + Y++ET++ + Sbjct: 540 ITEDLVGPYELHDFFLYYFLRCGFRPSKIFFLAARTFKDVYDEETIKKWLQTFCRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|281420249|ref|ZP_06251248.1| putative NH(3)-dependent NAD(+) synthetase [Prevotella copri DSM 18205] gi|281405744|gb|EFB36424.1| putative NH(3)-dependent NAD(+) synthetase [Prevotella copri DSM 18205] Length = 664 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 138/655 (21%), Positives = 256/655 (39%), Gaps = 112/655 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A VGD+ N + A +G+++I F EL I+GY +DL ++ ++ Sbjct: 6 IKVASAIPAVKVGDVIFNTQQIEEQIALAEGKGVEIITFPELSITGYSCQDLFRQQMLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ L T +VG P + +LN +++ G I+ + K LPNYSEF+ Sbjct: 66 SSEQAVMMLLDFTRKLDIISIVGAPVIAGDLLLNCGIVIQHGQILGIVPKTYLPNYSEFY 125 Query: 125 EKRTFISGYSNDPI-------------------VFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F S F ++ G+ ICED+W + L Sbjct: 126 EKRWFASAQDLRDCEVRYAGHKVKLTPDVQIFQTFDGVQFGVEICEDVWAPAPPSNKLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K +++ Q + IY + G+ ++++ G + + Sbjct: 186 AGADLIFNLSASDELIGKHHYLKSLLSQQSARTMTGYIYSSCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD------------------------ 259 + L Q + FS + M D + + ++ Sbjct: 246 EN-GVLLSQSERFSIEPQMVISQIDVEKLRSERRTNSTYVNAQRNIKYSVLGGQFNIRNI 304 Query: 260 ---------------DSASTMYIP-----LQEEEADYNACVLSLRDYVQKNNFHKVIIGL 299 + +IP E +N ++ L + + V+IG+ Sbjct: 305 EADPTENERDFVLEREVNPHPFIPTSSDMNASCEEIFNIQLMGLAKRIVHTHAKTVVIGI 364 Query: 300 SGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + V A ++ + + +P T+ ++ +A + ++LG + Sbjct: 365 SGGLDSTLALLVCVKAFDKLKVNRKGIVGVTMPGFGTTDRTYNNAISLMQSLGITIKEIS 424 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I V F + Q + EN Q+R R ILM L+N M++ T + SE+++G Sbjct: 425 IAKAVTQHFEDIGQ--DASVHDVTYENSQARERTQILMDLANKMGGMVIGTGDLSELALG 482 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT + L + SG+ + + I++ S EL Sbjct: 483 WATYNGDHMSMYGVNASIPKTLIRHLVNHVAE----SGVDEQSRITLRDIIDTPISPELI 538 Query: 475 PH-------QTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQE------- 509 P Q ++ + PY + D + + +++FI+++ E Sbjct: 539 PADENGNIKQKTEDLVGPYELHDFFLYYFLRFGFRPSKIYMLAKKAFIDSELERVKISDN 598 Query: 510 ----YNDETVRYVE----HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNK 554 Y++ET++ + ++KR P G K+ + S D P Sbjct: 599 DPDSYDEETIKKWLKTFVRRFFNQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDAA 653 >gi|110668487|ref|YP_658298.1| NAD(+) synthase (glutamine-hydrolyzing) [Haloquadratum walsbyi DSM 16790] gi|109626234|emb|CAJ52692.1| NAD(+) synthase (glutamine-hydrolyzing) [Haloquadratum walsbyi DSM 16790] Length = 561 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 188/573 (32%), Positives = 278/573 (48%), Gaps = 33/573 (5%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KIAI Q NP+VGD++GN + A E+A G+ LI+ EL + GYPP DL+ ++ Sbjct: 1 MSLPIKIAIVQHNPIVGDVSGNCTQIIEAYEQATDAGVGLIITPELALLGYPPRDLLHRQ 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIV---VGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 A +A++TL+ T G IV R + NS + G +K L Sbjct: 61 RVRDAEQTALETLRHLTEQGPPLIVGHTASADRTSGPPLTNSATVFVDGEATVQYNKRLL 120 Query: 118 PNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN----------ICKHLKKQG 167 P Y F E R F G + D +GI ICED W + + Sbjct: 121 PTYDIFDEHRYFSRGTESQTTHIDDTTVGITICEDAWYDHEVTGQQRHQTDPIAPYETAD 180 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ 227 + L +L+ASPY NK R + + P+++ NQVGG D+++FDG SF D Sbjct: 181 VDLLVNLSASPYRVNKSSARFDRFGRHARRIDAPVVFANQVGGNDDILFDGTSFILDSDG 240 Query: 228 QLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYV 287 + + + ST E L +RDY+ Sbjct: 241 SQIASATSGEPRVLI--------------GQPKNNSTSGTTPSETAQLRRMLELGIRDYL 286 Query: 288 QKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALG 347 K+ F VIIGLSGGIDS++ AA+A +A+G NV I LP T+ + DA A+ LG Sbjct: 287 DKSGFDDVIIGLSGGIDSSVTAALAAEAIGPSNVHGITLPSAITTENNRTDAERVAQNLG 346 Query: 348 CKYDVLPIHDLVNHFFSLMSQFL-QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 ++D + I L ++ ++ GI EN+Q+R+RG +LM +SN A++LT Sbjct: 347 IQFDEIGIEHLSQSLLDAINGVTPGDDTRGITRENVQARVRGLLLMGVSNDLDALVLTPD 406 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE +VGY TLYGD G PL D K +V+ LA N+ T + IP S+++ Sbjct: 407 NKSEAAVGYCTLYGDAVGAIAPLGDCTKRRVYALAEDFNTDIPTW---ADSTPIPHSVIQ 463 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYN--DETVRYVEHLLYG 524 K+P+AEL QTD + +PPY I D ++ + V ++ +E N E V+ V + Sbjct: 464 KAPTAELAEGQTDVDDIPPYEITDAVVSQYVGDKYPLTQIVEETNATKEQVKTVVENITQ 523 Query: 525 SEYKRRQAPVGTKITAKSFGRDRLYPISNKFRD 557 SE+KR+Q P ++T K+F YPI+ + + Sbjct: 524 SEFKRKQTPPALRVTTKAFDSGWRYPIAASYDE 556 >gi|212703476|ref|ZP_03311604.1| hypothetical protein DESPIG_01520 [Desulfovibrio piger ATCC 29098] gi|212673090|gb|EEB33573.1| hypothetical protein DESPIG_01520 [Desulfovibrio piger ATCC 29098] Length = 550 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 174/570 (30%), Positives = 287/570 (50%), Gaps = 40/570 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q N V GD+AGN + A EA QG DL + EL + G P + + F + Sbjct: 1 MKIALLQCNTVTGDVAGNAERILAAVREAAAQGADLCVTPELALCGVAPGSYLRAEDFAE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ---DQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 C + + L DG ++VG P + N+ +++ G V K+ Y Sbjct: 61 GCKAGLQMLADALQDGPP-LLVGAPVASVYASGLLSNAAILVQKGRWSVVSRKVY-QTYG 118 Query: 122 EFHEKRTFISGYSNDPIVFRDIRLGILICED-------IWKN-----SNICKHLKKQGAE 169 + E R F G S + RLG+++C++ WK N L ++G + Sbjct: 119 QDSEARFFDRGVSCGILALDGWRLGVVLCQESATEDGAFWKTQYASGHNPLMELVQRGVD 178 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + + A P+ + ++++ + H+ + VN VGG D +++G S FD Q+ Sbjct: 179 AIVHMAAVPFSKGVQRLSEQMLSHVAARHHVHLFSVNMVGGNDSRVYNGQSLAFDPTGQI 238 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + K F+E + + + P EA ++A L +RD+V K Sbjct: 239 LARGKAFAEDVLLVD------------TAGSGGIVHPRPACLPEAIWDALTLGVRDFVHK 286 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 K I+ LSGG+DSAL +A +ALG +NV +++P Y+S S+ D+ A+ LG + Sbjct: 287 CGLEKAIVALSGGMDSALVLCVAAEALGADNVTAVLMPSPYSSEGSVSDSLELAENLGVR 346 Query: 350 YDVLPIHDLVNHFFSLMSQ---FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 LPI ++ F + ++ + P EN+Q+RIRG ++ +L+N ++A++L T Sbjct: 347 TLTLPIEPVMESFSAALAPGLDLFETFPGDTTFENLQARIRGIMVSSLANRARALVLNTG 406 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 NKSE +VGY TLYGD G + DL KT+V+ LA W N H + +IP +I + Sbjct: 407 NKSECAVGYSTLYGDTVGALGVIADLTKTEVYTLAGWYNHHRQAT-------IIPQAIFD 459 Query: 467 KSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSE 526 K+PSAELRP Q D +SLPPY +LD +++ ++ ++ Q+ ++ + V L+ +E Sbjct: 460 KAPSAELRPGQKDSDSLPPYDVLDPVLESLIFAGQT-AAQPQDADEGLRKEVRRKLFAAE 518 Query: 527 YKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 +KRRQ P+G I+ FG P++ ++R Sbjct: 519 FKRRQEPLGLHISRMPFGTGWQVPVAGRYR 548 >gi|167772565|ref|ZP_02444618.1| hypothetical protein ANACOL_03943 [Anaerotruncus colihominis DSM 17241] gi|167665043|gb|EDS09173.1| hypothetical protein ANACOL_03943 [Anaerotruncus colihominis DSM 17241] Length = 637 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 135/635 (21%), Positives = 236/635 (37%), Gaps = 85/635 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A+A V D N A A A + G L++ EL ++GY DL +++ I+ Sbjct: 6 IKVAVATPEIRVADCVFNTAAAVGMARRAAQCGARLLVLPELCLTGYTCGDLFLRETLIE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ +L + T IV G P + N ++ G ++ + K +LPNY EF+ Sbjct: 66 GARAALASLCAQTRALPVLIVAGLPVVSGAKLYNCAAVVYQGRVLGIVPKTHLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIVFRD--------------------IRLGILICEDIWKNSNICKHLK 164 E+R F+ R + +CED+W Sbjct: 126 ERRWFVPAPDGSCGFVRGYGEGEVPFGRMLFQCEELGEFCFAVELCEDLWAPVAPSAAYA 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K R +VTGQ + +Y N G+ +L+F G S Sbjct: 186 AAGATVIANLSASVETVGKDDYRRALVTGQSGRLVCGYLYANAGEGESTTDLVFSGHSMI 245 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMY---------------- 266 + L Q F + ++E + + ++ A Sbjct: 246 AENGSML-AQTGRFEQTMAVSEIDVQRLAFERRRLTTFPAGDAQSFLTIPFSMPLTETKL 304 Query: 267 ----------IPLQEEEADYNACVL-----SLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 P A +L L+ + ++G+SGG+DSAL + Sbjct: 305 TRPVPALPFVPPKGPGRDQCCAGILQVQAHGLKKRIDHTGAKTAVVGISGGLDSALALLV 364 Query: 312 AVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 V A+ + +V + +P T+ ++ +A + LG + + I V F+ + Sbjct: 365 CVRAMELLGRPRTDVHAVTMPCFGTTARTRGNAQIICERLGVTFSCVDITASVRRHFADI 424 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 E + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 425 GH--DEAVRDVTFENAQARERTQVLMDIANETGGLVVGTGDLSELALGWATYNGDQMSMY 482 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L ++ L IL+ S EL P Q + Sbjct: 483 GVNASVPKTLVRHLVAYEAERACDDALRAALC----DILDTPVSPELLPPDDGAIAQKTE 538 Query: 481 ESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV----RYVEHLLYGSEYK 528 + + PY + D + ++ + Q Y ET+ R + ++K Sbjct: 539 DLVGPYELHDFFLYHVLRWGFSPHKTLRLALYAFGQAYPRETILYWMRTFYRRFFAQQFK 598 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 R P G KI + S D P +SE Sbjct: 599 RSCMPDGPKIGSVSLSPRGDWRMPSDASAALWLSE 633 >gi|329954457|ref|ZP_08295548.1| NAD+ synthase [Bacteroides clarus YIT 12056] gi|328527425|gb|EGF54422.1| NAD+ synthase [Bacteroides clarus YIT 12056] Length = 643 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 131/630 (20%), Positives = 239/630 (37%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + A+ +G+ +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNAGQIEKEIIIADGKGVQIIAFPELCITGYTCADLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G I+ + K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQMDIISILGMPVPLNGVLLNTAVVIQKGKILGIVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S N D GI ICED+W L QG Sbjct: 126 EKRWFTSAREVSETTARLCGQVVPMGRNLLFETADTTFGIEICEDLWAPIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNLSADNEGIGKHAYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 LA + F EQ ++E + ++ + +A Sbjct: 246 GTLLASSERFSFGEQVVISEIDVEHIRTERRVNTTFTACHANCAPEVPVRISTEYVNSGD 305 Query: 263 --------STMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P E ++ V L + N ++G+SGG+DS L Sbjct: 306 LNLTRTFDPHPFVPQGPALNERCEEIFSIQVSGLAQRLVHTNAKSAVVGISGGLDSTLAL 365 Query: 310 AIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V ++ + + +P T+ ++ +A +LG + I D F Sbjct: 366 LVCVKTFDKLGWDRKGIIGVTMPGFGTTDRTHTNAVDLMTSLGVTMREVSIKDACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDIN--VHDVVYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + + + I++ S EL P Q Sbjct: 484 MYGVNGSIPKTLVKHLVKWVAEN----DMDETSRATLLDIVDTPISPELIPADENGNIRQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + Y++ET++ + Sbjct: 540 ITEDLVGPYELHDFFLYYFLRCGFRPSKIFFLAARTFKDVYDEETIKKWLRTFCRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|154492523|ref|ZP_02032149.1| hypothetical protein PARMER_02157 [Parabacteroides merdae ATCC 43184] gi|154087748|gb|EDN86793.1| hypothetical protein PARMER_02157 [Parabacteroides merdae ATCC 43184] Length = 643 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 137/639 (21%), Positives = 244/639 (38%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI K +A+ +G+ +I F EL ++GY DL +++ + Sbjct: 6 VKVAAAVPLVQVADCFYNIEKIEGLMRQASEKGVQIIAFPELSVTGYTCLDLFAQQTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ L S+T D +VG P + + ++N+ V+ G I V K LPNY EF Sbjct: 66 GAEAALLQLVSNTADLDILTIVGVPLRTENRLINAAVVFQKGAIRGVVPKTYLPNYKEFQ 125 Query: 125 EKRTFISGYS---------------NDPIVFRDIRL--GILICEDIWKNSNICKHLKKQG 167 E+R F S ++FR RL GI ICED+W L +G Sbjct: 126 EQRWFTSATELRESTISIGKEEYPMGSHLLFRSGRLTAGIEICEDLWVPVPPSSLLTMEG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANIIFNLSASNELIGKHAYLRSLICQQSARCMAGYVYASSGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ------------- 270 L + F EQ ++E + + + T +P + Sbjct: 246 -GNLLAESPRFTMEEQLVISEIDIETLQNDRQVNTSFMYGTSGLPKEKAQVVDFQVRISD 304 Query: 271 ----------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 E ++ V L + + ++G+SGG+DS L Sbjct: 305 GFSLTRPVDPHPFTPSGEALKERCEEIFHIQVAGLAKRLVHAHAQTAVVGISGGLDSTLA 364 Query: 309 AAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V + + + I +P T+ ++ +A ++LG +PI + F Sbjct: 365 LLVTVMTFDALKMPRGQIIGITMPGFGTTDRTYTNACDLIRSLGVTLKEIPIKEACLQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 425 RDIDH--DPSVHDVTYENSQARERTQLLMDVANQKNGLVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W +H + + + I++ S EL P Sbjct: 483 SMYGVNGSIPKTLVKYLVEWVANHKV----DDASRLTLLDIVDTPISPELIPADENGNIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + Y++ TV+ + Sbjct: 539 QKTEDLVGPYELHDFFLYHFLRFGSHPSKIYFLAQKAFAGIYDNATVKKWLYTFCRRFFQ 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 ++KR P G K+ + S D P R + E Sbjct: 599 QQFKRSCLPDGPKVGSVSLSPRGDWRMPSDAVSRLWLEE 637 >gi|288925764|ref|ZP_06419695.1| glutamine-dependent NAD+ synthetase [Prevotella buccae D17] gi|288337419|gb|EFC75774.1| glutamine-dependent NAD+ synthetase [Prevotella buccae D17] Length = 651 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 135/640 (21%), Positives = 248/640 (38%), Gaps = 98/640 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + A QG+++I+F EL I+GY +DL ++ ++ Sbjct: 6 IKVATAIPSVKVGDVKFNTRQIESQIALAEGQGVEIIVFPELCITGYTCQDLFLQQMLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +A+ L T +VG P + +LN I+ G I+ + K LPNY EF+ Sbjct: 66 SAETAMMMLLDFTRQLDIISIVGLPVVVGDLLLNCAAIIQHGKILGLVPKTYLPNYREFY 125 Query: 125 EKRTFISGYSND--PIVFRDIRL-----------------GILICEDIWKNSNICKHLKK 165 EKR F S + F R+ G+ CED+W + L Sbjct: 126 EKRWFASAQDLRETTVRFAGHRITVTPDPQIFITSEGAQFGVENCEDVWAPAPPSNKLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K ++ Q + IY + G+ +++F G + + Sbjct: 186 AGAELIFNLSASDELSGKHTYLKSLLAQQSARTITGYIYSSCGFGESTQDVVFGGNALIY 245 Query: 224 DGQQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMS----------------------- 258 + L + + F Q + + ++ S+ S Sbjct: 246 EN-GSLIAEGERFALEPQMRIAQIDIEKLRSERRTNSTYVNAQRNVKYAIRSGRYSVHNI 304 Query: 259 --------------DDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGL 299 + + +IP + E +N ++ L + +I+G+ Sbjct: 305 EMLASFNRRDFVLEREIDAHPFIPHEAEMGVTCEEIFNIQLMGLAKRIVHTGAKHLILGI 364 Query: 300 SGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + V A + ++++ + +P T+ ++ +A +LG + Sbjct: 365 SGGLDSTLALLVCVKAFDKLGMNRKDIIGVTMPGFGTTDRTYRNAITLMGSLGVTIREIS 424 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I D V F + + + EN Q+R R ILM LSN +++ T + SE+++G Sbjct: 425 ITDAVEQHFKDIGHDIS--VHDVTYENAQARERTQILMDLSNELGGIVVGTGDLSELALG 482 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT + + + SG+ + V I++ S EL Sbjct: 483 WATYNGDHMSMYGVNASVPKTLIQHMVRYVAE----SGVDEKSRVTLLDIVDTPISPELT 538 Query: 475 PH-------QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYV- 518 P Q ++ + PY + D + + + + Y++ V+ Sbjct: 539 PADESGEIRQKTEDLVGPYELHDFFLYYFLRFGFRPKKLFFLACRAFEGVYDEIIVQKWL 598 Query: 519 ---EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ S D P Sbjct: 599 VVFLRRFFSQQFKRSCLPDGPKVGNVSLSPRGDWRMPSDA 638 >gi|240143633|ref|ZP_04742234.1| glutamine-dependent NAD+ synthetase [Roseburia intestinalis L1-82] gi|257204381|gb|EEV02666.1| glutamine-dependent NAD+ synthetase [Roseburia intestinalis L1-82] Length = 660 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 134/632 (21%), Positives = 247/632 (39%), Gaps = 87/632 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +++ +K+A V D N ++ +EA G +I+ EL I+GY DL + Sbjct: 17 MRQGFVKVAAVTPKIRVADTGYNAKVICQSVKEAAEAGAKVIVLPELCITGYTCGDLFLQ 76 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + ++ + + + T D A + VG P + + N L+ G I+ + K LPN Sbjct: 77 EKLLREAKEELLHIAAFTTDVDAIVFVGLPLAYKGKLYNVAAALNRGKILGIVPKTYLPN 136 Query: 120 YSEFHEKRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNI 159 Y+EF+E R F G + ++ + +CED+W + Sbjct: 137 YNEFYEARHFTRGMEEVADVRLTEELTVPMGTRQLFTCLELPELVIAAELCEDLWTMNPP 196 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFD 217 GA + +L+AS K R E+V GQ + + IY + G+ ++++ Sbjct: 197 SIGHAMHGATLIVNLSASDETTGKPAYRRELVKGQSARLLCGYIYASAGDGESTQDVVYS 256 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD----------------- 260 G + + + L + + F Q TE + S+ M+ Sbjct: 257 GHNLIAENGRLL-AESELFDAQTISTEIDVSRLASERRRMTTFETVTEPVYRENVFSLQM 315 Query: 261 --------SASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++P E E + + L+ ++ + +IG+SGG+DS Sbjct: 316 EETKLTRYIDPMPFVPSGERDRTLRCEEILSIQSMGLKKRLEHTHCKSAVIGISGGLDST 375 Query: 307 LCAAI---AVDALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + A DALG + N++ + +P T+ ++ ++A + + LG + + I D VN Sbjct: 376 LALLVTVRAFDALGMDHSNIKAVTMPGFGTTDRTYDNAVSLIRCLGADFIEVDIKDAVNI 435 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + Q + EN Q+R R ILM ++N S M++ T + SE+++G+ T GD Sbjct: 436 HFRDIGQ--DPSMHDVTYENGQARERTQILMDIANKSGGMVIGTGDLSELALGWATYNGD 493 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V L + L + +L+ S EL P Sbjct: 494 HMSMYAVNASVPKTLVRHLVRYYADTCGDETLKQ----VLLDVLDTPVSPELLPPEDGKI 549 Query: 476 HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLY 523 Q ++ + PY + D + ++ + Y+D T+ + Sbjct: 550 SQKTEDLVGPYELHDFYLYHMLRLSYAPAKVYRLAKQAFAGTYDDATIFKWLETFYRRFF 609 Query: 524 GSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + + D P Sbjct: 610 AQQFKRSCLPDGPKVGSVAVSPRGDLRMPSDA 641 >gi|288928465|ref|ZP_06422312.1| glutamine-dependent NAD+ synthetase [Prevotella sp. oral taxon 317 str. F0108] gi|288331299|gb|EFC69883.1| glutamine-dependent NAD+ synthetase [Prevotella sp. oral taxon 317 str. F0108] Length = 647 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 136/637 (21%), Positives = 246/637 (38%), Gaps = 95/637 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + ++AN QG ++++F EL I+GY +DL ++ I+ Sbjct: 6 IKVAAAIPAVKVADCHFNAEQTEQQIKQANEQGAEIVVFPELGITGYTCQDLFTQQLLIE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L +T VVG P +LN V+ G+I+ + K LPNYSEF+ Sbjct: 66 QAELAVGSLLENTKTLDIIAVVGVPVAVDSILLNCAVVFQRGHILGIVPKTYLPNYSEFY 125 Query: 125 EKRTFIS-------------------GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F S S + ++ G+ ICED+W + +L Sbjct: 126 EKRWFASTHHLNETSIHYAGQQALLTAQSQIFVTADGVKFGVEICEDVWAPNPPGTYLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ + +L+AS K ++ Q + +Y G+ ++++ G + + Sbjct: 186 AGADIVCNLSASDELIGKHTYLKSLLAQQSARTMAGYVYSGCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + +L Q K F + + D + ++ + Sbjct: 246 EN-GKLLTQNKRFDFEPQIVVSEIDIFKLRAERRTNSTYVNAQHGHTALLHTAQAPLTNK 304 Query: 262 --------ASTMYIPLQEEEAD-----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E+ D +N V L ++ + KV++G+SGG+DS L Sbjct: 305 PFALQRTIDPLPFVPQDEQMYDSCEEIFNIQVSGLAQRLKHIHASKVVLGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K E + + +P T+ ++ +A + LG + I V F Sbjct: 365 LLVCVRTFDKLGLSREGIIGVTMPGFGTTNRTYRNAIDLMRELGITTHEINIAKSVTQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + +V EN Q+R R ILM L N +++ T + SE+++G+ T GD Sbjct: 425 EDIGHDMA--VHDVVYENGQARERTQILMDLGNKLGGIVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT + L + T I++ S EL P Sbjct: 483 SMYAVNVSIPKTLIKHLVRHVAQ----TMHNEATCQTLYDIIDTPISPELIPADEAGNIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------------ESFINNDQEYNDETVRYV---- 518 Q ++ + PY + D I + + S + Y+D+ +++ Sbjct: 539 QKTEDLVGPYELHDFFIYHFLRHGFTPQRLFIMARHAFASPQQRAKHYSDDEIKHWLRVF 598 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 599 LRRFFAQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 635 >gi|326790646|ref|YP_004308467.1| NAD+ synthetase [Clostridium lentocellum DSM 5427] gi|326541410|gb|ADZ83269.1| NAD+ synthetase [Clostridium lentocellum DSM 5427] Length = 647 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 134/640 (20%), Positives = 245/640 (38%), Gaps = 94/640 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+A A + V D N + + + A+++G +I F EL I+GY DL F+ Sbjct: 1 MYGFVKLAAAVPSVRVADCYYNKEQILKQIQLADQEGAQVIGFPELCITGYTCADLFFQT 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + +++ A+ + T IV+G P ++ + N +L G ++ V K +PNY Sbjct: 61 TLLESAKKALGEIAKATRKMEMLIVLGLPLMIEDELYNCAAVLLKGKVLGVVPKSYIPNY 120 Query: 121 SEFHEKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHL 163 +EF+EKR F G ++++G+ ICED+W L Sbjct: 121 NEFYEKRWFALGTDLGIGEMTLLGEKVPVGTDLLFECGELKVGVEICEDVWTPIPPSSLL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS K R ++++ Q + +YV+ + +L+F G S Sbjct: 181 TLAGANVIVNLSASNEIIAKRNYRRQLISQQSARTLCAYLYVSAGAEESTTDLVFSGHSL 240 Query: 222 CFDGQQQLAFQMKHFSEQ-NFMTEWHYDQQL----------------------------S 252 + + K + + ++ S Sbjct: 241 IAENGAIIKENEKLIDTDYVLVADIDLERLQKDRIKGKSYGDSRKLFMPEVRRIEGETLS 300 Query: 253 QWNYMSDDSASTMYIPL------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 A ++P + E ++ V L+ + + IIG+SGG+DS Sbjct: 301 YRGTFKGRIARKPFVPHAAETRDKRCEDIFSLQVAGLKKRLSHTGSKRAIIGISGGLDST 360 Query: 307 LCAAIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L +AV ++ V + +P T+ ++ E+A + LG +PI Sbjct: 361 LALLVAVQVFDDLGWDRKGVVGVTMPGFGTTDRTYENALQLMRELGITMREIPIAAACKQ 420 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 FS + E I EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 421 HFSDIGH--DENVHDITYENTQARERTKILMNIANQGGGMVVGTGDLSELALGWCTYNGD 478 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH----- 476 + + KT V L + L +V L+ S EL P Sbjct: 479 HMSMYAVNTSVPKTLVRSLVYTISKRQSEKVKDTLLDV-----LDTPVSPELLPVGKNGE 533 Query: 477 --QTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQEYND--------ETV 515 Q ++++ PY + D + ++ + +F ++E ++ + + Sbjct: 534 MLQKTEDTVGPYELHDFFLYYLLRFGFSPSKIYFLAKTAFAVKEEEIDELYSHETILKWL 593 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + + ++KR P G KI + D P Sbjct: 594 KVFYRRFFSQQFKRSCLPDGPKIGSICLSPRGDWRMPSDA 633 >gi|153807936|ref|ZP_01960604.1| hypothetical protein BACCAC_02222 [Bacteroides caccae ATCC 43185] gi|149129545|gb|EDM20759.1| hypothetical protein BACCAC_02222 [Bacteroides caccae ATCC 43185] Length = 641 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 131/631 (20%), Positives = 243/631 (38%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ + A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVERIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+NS V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINSAVVIQKGKVLGVTAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S D GI ICED+W L QG Sbjct: 126 EQRWFTSAIQLTTDNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKHNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 L + + F EQ ++E ++ ++ + +A Sbjct: 246 -GSLLARSERFSMEEQLIISEIDVERIRAERRINTTFAANQAKLRDKRAVSVATEFVNSK 304 Query: 263 ---------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P + E + V L + ++G+SGG+DS L Sbjct: 305 ELTLTRSFHPHPFVPQGKELNEHCEDIFAIQVAGLAQRLVHTGAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K + + I +P T+ ++ +A K+LG + I D F Sbjct: 365 LLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAINLMKSLGISIREISIKDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIDHDIN--VHDVTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W +G+ ++ I++ S EL P Sbjct: 483 SMYGVNASVPKTLVKYLVQWVAENGV----DEDSKTTLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVEHL----LYG 524 Q ++ + PY + D + + + I Y++ET++ + + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIYYLANIAFKGNYDEETIKKWLAIFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|225019726|ref|ZP_03708918.1| hypothetical protein CLOSTMETH_03679 [Clostridium methylpentosum DSM 5476] gi|224947571|gb|EEG28780.1| hypothetical protein CLOSTMETH_03679 [Clostridium methylpentosum DSM 5476] Length = 689 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 139/620 (22%), Positives = 239/620 (38%), Gaps = 81/620 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A VGD N + A+ +G L+LF EL ++ Y DL+ + ++ Sbjct: 60 IRVAAATPLNRVGDTRYNAEQTVSLIRRAHARGASLVLFPELSVTAYSCGDLLLSSTLLR 119 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + +T + +VG P D + N +L G+I + K NLPNY EF+ Sbjct: 120 GTEQAVQHILDETKELDITAIVGLPVSDGVRLYNCAAVLSKGSICGIVPKQNLPNYGEFY 179 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E R F S D ++GI ICED+W NS + L + G Sbjct: 180 EARWFSPASSLQTDTVTLCGQQTSICCELLFTLGDAKIGIEICEDLWVNSPPSERLAEAG 239 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A + +L+AS K R +V + H + + + + ++ G S + Sbjct: 240 ANLICNLSASNAVIGKRSYRSMLVRQRSFCSHCAYLLASAGITESTTDTLYSGHSLIAEN 299 Query: 226 QQQL-AFQMKHFSEQNFMTEWHYDQQLSQWN----YMSDDSASTMYIPL----------- 269 L +F EQ + ++ S + + A + +P Sbjct: 300 GSILAEAMQDNFEEQLLFADIDLERLSSDRRKMTTFPTGGWAQEIELPHGVQAFSLERRL 359 Query: 270 --------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA 315 + E YN LSL ++ +IG+SGG+DS L + V A Sbjct: 360 SKTPFLPSSSARKDERMEEIYNIQSLSLAKRLRHTGLKHPVIGISGGLDSTLALLVTVRA 419 Query: 316 LGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL 370 + K NV I +P TS ++L ++ ALG + I + F + Sbjct: 420 MDKLGLDRSNVIGITMPGFGTSGRTLTNSQRLMAALGITSRQIDITEACLKHFEDIGH-- 477 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 + + EN+Q+R R IL+ ++N + +++ T + SE+++G+ T GD + Sbjct: 478 DPDVQDVTYENVQARERTQILLDIANKNNGLVVGTGDLSELALGWATYAGDHISMYGVNA 537 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLP 484 + KT V + +W G E I IL+ S EL P Q +E + Sbjct: 538 GVPKTLVRHVVAW-----TGRTYGGEIEEILKDILDTPVSPELLPTKDGEIAQKTEEIIG 592 Query: 485 PYPILDDIIKRIVENEESFI--------NNDQEYNDETVR----YVEHLLYGSEYKRRQA 532 Y + D + + +F ++Y E ++ + ++KR Sbjct: 593 DYILHDFFLYYFIRFGFTFDKILFLACHAFGEDYTKEQIKSCLTTFVRRFFSQQFKRSCL 652 Query: 533 PVGTKITAKSFGR--DRLYP 550 P G KI + + D P Sbjct: 653 PDGPKIGSVTLSPRADWRMP 672 >gi|253567615|ref|ZP_04845026.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_6] gi|251841688|gb|EES69768.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_6] Length = 641 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 128/631 (20%), Positives = 242/631 (38%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ + A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVERIESQIAIAEGKGVQIIVFPEMSITGYTCGDLFGQQILLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S N D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTEDTVRLCGQIVPIGANLLFETSDTTFGIEICEDLWATIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNMSADNEGIGKHHYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMS------------------------- 258 L + K F EQ ++E ++ ++ + Sbjct: 246 -GSLLARSKRFCMEEQLIISEIDVERIRAERRINTTFAASQGNPGDKKAISVATEFINSK 304 Query: 259 -----DDSASTMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 D S ++P + E ++ + L + ++G+SGG+DS L Sbjct: 305 ELTLTRDFNSHPFVPQGAELDEHCEEVFSIQIAGLAQRLVHTKAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V ++++ + +P T+ ++ +A K+LG + I D F Sbjct: 365 LLVCVKTFDKLGLPRKDILGVTMPGFGTTDRTYNNAIDLMKSLGISIREISIQDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIDHDIN--VHDVTYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + + + I++ S EL P Sbjct: 483 SMYGVNGSIPKTLVKYLVQWVAEN----DMDEDAKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + I Y+ ET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIYYLANIAFKDVYDKETIKKWLSTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|29345615|ref|NP_809118.1| NAD synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|29337507|gb|AAO75312.1| glutamine-dependent NAD+ synthetase [Bacteroides thetaiotaomicron VPI-5482] Length = 641 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 128/631 (20%), Positives = 242/631 (38%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ + A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVERIESQIAIAEGKGVQIIVFPEMSITGYTCGDLFGQQILLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S N D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTEDTVRLCGQIVPIGANLLFETSDTTFGIEICEDLWATIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNMSADNEGIGKHHYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYM-------------------------- 257 L + K F EQ ++E ++ ++ Sbjct: 246 -GSLLARSKRFCMEEQLIISEIDVERIRAERRINTTFAASQGNPGDKKAISVATEFVNSK 304 Query: 258 ----SDDSASTMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + D S ++P + E ++ + L + ++G+SGG+DS L Sbjct: 305 ELTLTRDFNSHPFVPQGAELDEHCEEVFSIQIAGLAQRLVHTKAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V ++++ + +P T+ ++ +A K+LG + I D F Sbjct: 365 LLVCVKTFDKLGLPRKDILGVTMPGFGTTDRTYNNAIDLMKSLGISIREISIQDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIDHDIN--VHDVTYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + + + I++ S EL P Sbjct: 483 SMYGVNGSIPKTLVKYLVQWVAEN----DMDEDAKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + I Y+ ET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIYYLANIAFKDVYDKETIKKWLSTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|291537241|emb|CBL10353.1| NAD+ synthetase [Roseburia intestinalis M50/1] Length = 644 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 134/632 (21%), Positives = 247/632 (39%), Gaps = 87/632 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +++ +K+A V D N ++ +EA G +I+ EL I+GY DL + Sbjct: 1 MRQGFVKVAAVTPKIRVADTGYNAKVICQSVKEAAEAGAKVIVLPELCITGYTCGDLFLQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + ++ + + + T D A + VG P + + N L+ G I+ + K LPN Sbjct: 61 EKLLREAKEELLHIAAFTTDVDAIVFVGLPLAYKGKLYNVAAALNRGKILGIVPKTYLPN 120 Query: 120 YSEFHEKRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNI 159 Y+EF+E R F G + ++ + +CED+W + Sbjct: 121 YNEFYEARHFTRGMEEVADVRLTEELTVPMGTRQLFTCLELPELVIAAELCEDLWTMNPP 180 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFD 217 GA + +L+AS K R E+V GQ + + IY + G+ ++++ Sbjct: 181 SIGHAMHGATLIVNLSASDETTGKPAYRRELVKGQSARLLCGYIYASAGDGESTQDVVYS 240 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD----------------- 260 G + + + L + + F Q TE + S+ M+ Sbjct: 241 GHNLIAENGRLL-AESELFDAQTISTEIDVSRLASERRRMTTFETVTEPVYRENVFSLQM 299 Query: 261 --------SASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++P E E + + L+ ++ + +IG+SGG+DS Sbjct: 300 EETKLTRYIDPMPFVPSGERDRTLRCEEILSIQSMGLKKRLEHTHCKSAVIGISGGLDST 359 Query: 307 LCAAI---AVDALGKE--NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + A DALG + N++ + +P T+ ++ ++A + + LG + + I D VN Sbjct: 360 LALLVTVRAFDALGMDHSNIKAVTMPGFGTTDRTYDNAVSLIRCLGADFIEVDIKDAVNI 419 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + Q + EN Q+R R ILM ++N S M++ T + SE+++G+ T GD Sbjct: 420 HFRDIGQ--DPSMHDVTYENGQARERTQILMDIANKSGGMVIGTGDLSELALGWATYNGD 477 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V L + L + +L+ S EL P Sbjct: 478 HMSMYAVNASVPKTLVRHLVRYYADTCGDETLKQ----VLLDVLDTPVSPELLPPEDGKI 533 Query: 476 HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLY 523 Q ++ + PY + D + ++ + Y+D T+ + Sbjct: 534 SQKTEDLVGPYELHDFYLYHMLRLSYAPAKVYRLAKQAFAGTYDDATIFKWLETFYRRFF 593 Query: 524 GSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + + D P Sbjct: 594 AQQFKRSCLPDGPKVGSVAVSPRGDLRMPSDA 625 >gi|206900131|ref|YP_002251717.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum H-6-12] gi|206739234|gb|ACI18292.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum H-6-12] Length = 527 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 182/552 (32%), Positives = 296/552 (53%), Gaps = 29/552 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI +AQ+NP +GDI GN+ K + A +A D+I+F EL + GYPP DL+ + Sbjct: 1 MKITLAQINPTIGDIEGNLIKIKNAILKAISDKSDVIIFPELSLLGYPPFDLLKNRIIRD 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + I++G P + +SV + +I DK N Sbjct: 61 KLERALQKILEE--KFSINILLGAPYFENNKTYDSVYWIKENKVIKRIDKFYFSNDPL-G 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICK-HLKKQGAEFLFSLNASPYYHNK 183 + F + I D ++ ILI +D + + + + + + +++S YY K Sbjct: 118 QNDYFSKDAKPEYIEINDKKIAILISDDTLFSYDFSGFNDYLKNSNLILIVSSSFYYFGK 177 Query: 184 LKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 K++ E ++ ++ +IY+NQVGG EL+F+G S + + F+ + F+E Sbjct: 178 RKEKIEKISNFAKNLGKKVIYINQVGGNGELVFEGGSLVISEEGTVIFEGEIFNEDIKTI 237 Query: 244 EWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + +S + ++ YN+ V+ LRD+++K+ F K +IGLSGGI Sbjct: 238 DL--------------ESLFPILHKNEDLSFLYNSLVMGLRDFIKKSGFRKAVIGLSGGI 283 Query: 304 DSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 DSAL A IA +ALGK+NV + LP YTS +S+EDA ++ LG ++ ++PI ++ + Sbjct: 284 DSALVACIATEALGKDNVLGVSLPSIYTSKESIEDAKILSQNLGIEFRIIPISEIFYSYL 343 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 ++ ++ + EN+QSRIRGN+LM +SN +LL T N+SE GY TLYGD + Sbjct: 344 KELNPS-EKPVMDVAEENLQSRIRGNVLMFISNREGYLLLATGNRSEALTGYCTLYGDTA 402 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESL 483 G + D+YKT V++LA++ N E+IP +I+ K+PSAELRP Q D++SL Sbjct: 403 GAIEVIGDIYKTTVYELANYINKE---------KEIIPQNIITKAPSAELRPGQKDEDSL 453 Query: 484 PPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKS 542 PPY +LD I+K V+ + Q Y +E V+ V + SEYKR+Q P ++ +K+ Sbjct: 454 PPYSVLDPILKAYVDENKPMEEILQMGYKEELVKTVIEKVEKSEYKRKQIPPVLRVRSKN 513 Query: 543 FGRDRLYPISNK 554 R+R +P+ K Sbjct: 514 PLRERFFPLVYK 525 >gi|294778468|ref|ZP_06743891.1| NAD+ synthetase [Bacteroides vulgatus PC510] gi|294447730|gb|EFG16307.1| NAD+ synthetase [Bacteroides vulgatus PC510] Length = 654 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 126/630 (20%), Positives = 244/630 (38%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + A+ +G+ +I+F EL I+GY DL + ++ Sbjct: 19 VRVAAAIPIVKVADCKFNAQQIETQIAIADGKGVQIIIFPELSITGYTCADLFGQSLLLE 78 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T ++G P +LNS V+ G I+ + K LPNY EF+ Sbjct: 79 EAEMALMQIMNNTRQMDIISIIGMPVVMNSTLLNSAVVFQKGKILGIVPKTYLPNYKEFY 138 Query: 125 EKRTFIS------------GYSNDP-----IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S G + + GI ICED+W L +G Sbjct: 139 EQRWFTSALNHPDANVRLCGQNVPVSANLLFDTPETCFGIEICEDMWAPIPPSSALALKG 198 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A +K +V+ Q + ++ + G+ +++F G ++ Sbjct: 199 AEIIFNMSADNEGISKHNYVRSLVSQQSARCLAGYVFSSSGFGESTTDVVFAGNGLIYEN 258 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 LA + F EQ ++E ++ + + +A+ P + Sbjct: 259 GTLLAESERFSFKEQLVISEIDVERLRGERLTNTTFAANIGNCPGRPAIHISTEFVNTRD 318 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E + + L + + V++G+SGG+DS L Sbjct: 319 LSLTRSIEAHPFVPQGKELDERCEEIFAIQIAGLAKRLVHTHCKTVVVGISGGLDSTLAL 378 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + ++ + I +P T+ ++ +A +LG + I + F+ Sbjct: 379 LVCAKTFDKLDLPRKGIIGITMPGFGTTDRTYNNALHLMASLGVTIKEISIKESCIQHFN 438 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + + EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 439 DINHDM--TVHDVTYENSQARERTQILMDVANQLGGLVIGTGDLSELALGWATYNGDHMS 496 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L +W +G+ + + I++ S EL P Q Sbjct: 497 MYGVNGSIPKTLVKYLVNWVA----LNGMDNESRITLLDIVDTPISPELIPADENGNIKQ 552 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + + I Y++ET++ + Sbjct: 553 KTEDLVGPYELHDFFLYQFLRFGFRPAKIFFLASIAFRDTYDEETIKKWLTIFCRRFFQQ 612 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 613 QFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 642 >gi|166031131|ref|ZP_02233960.1| hypothetical protein DORFOR_00816 [Dorea formicigenerans ATCC 27755] gi|166028978|gb|EDR47735.1| hypothetical protein DORFOR_00816 [Dorea formicigenerans ATCC 27755] Length = 639 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 134/626 (21%), Positives = 244/626 (38%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N + + +EA G +I+F EL I+GY DL + + Sbjct: 6 IKVAAATPDIRVADVDYNKGQIIKQMDEAAEAGAKIIVFPELCITGYTCSDLFLQDILLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ + T + A + VG P + N L+ GNI+ K LPNY EF+ Sbjct: 66 SAKKALVEIAEHTKNLDALVFVGVPIAVGGELYNVAAALNHGNILGFTTKSFLPNYGEFY 125 Query: 125 EKRTFISGYS-NDPIVFRDIRLGI------------------LICEDIWKNSNICKHLKK 165 E R F G + I+F + ICED+W + Sbjct: 126 EMRQFRPGPKKAEKILFGGKEIPFGPQLLFVENQMANLIVSAEICEDVWSPVPPSIEAAR 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R +++GQ + + IY N G+ +L+F G + Sbjct: 186 EGATVIVNCSASDETIGKASYREALISGQSARLISGYIYANAGEGESTTDLVFGGHNLIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYI---------------- 267 + + + K FS TE+ + ++ + + + ++ Sbjct: 246 EN-GTILAEAKRFSNGIIYTEFDVQKIANERRKNTTFTETQEHVLPRIPFGLEQTETILT 304 Query: 268 ------PLQEEEADYNA---------CVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI- 311 P + A + L+ + + ++G+SGG+DS L + Sbjct: 305 RTFPSRPFVPRDDQERAKRCEEILTIQAMGLKKRLAHTHAKSAVVGISGGLDSTLALLVT 364 Query: 312 --AVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A DALG E + + +P T+ ++ ++A + +G + I D V F + Sbjct: 365 AKAFDALGLERSGITAVTMPCFGTTDRTYQNACKMSLKVGATLREVRIGDAVMQHFKDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 Q+ + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 425 HDPQD--HSVTYENSQARERTQVLMDIANQTGGLVIGTGDMSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + S L + +L+ S EL P Q ++ Sbjct: 483 VNASVPKTLVRHLVHYYADTCEDSSLKE----VLYDVLDTPVSPELLPPKDGEIAQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVEH----LLYGSEYKR 529 + PY + D + + + ++ EY+DET+ + ++KR Sbjct: 539 LVGPYELHDFFLYYFLRMGYEPGKIYRIAKLSFAGEYDDETIYKWLRTFCWRFFSQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + D P Sbjct: 599 SCLPDGPKVGTVALSPRGDWRMPSDA 624 >gi|150004902|ref|YP_001299646.1| NAD synthetase [Bacteroides vulgatus ATCC 8482] gi|149933326|gb|ABR40024.1| glutamine-dependent NAD+ synthetase [Bacteroides vulgatus ATCC 8482] Length = 641 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 126/630 (20%), Positives = 244/630 (38%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + A+ +G+ +I+F EL I+GY DL + ++ Sbjct: 6 VRVAAAIPIVKVADCKFNAQQIETQIAIADGKGVQIIIFPELSITGYTCADLFGQSLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T ++G P +LNS V+ G I+ + K LPNY EF+ Sbjct: 66 EAEMALMQIMNNTRQMDIISIIGMPVVMNSTLLNSAVVFQKGKILGIVPKTYLPNYKEFY 125 Query: 125 EKRTFIS------------GYSNDP-----IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S G + + GI ICED+W L +G Sbjct: 126 EQRWFTSALNHPDANVRLCGQNVPVSANLLFDTPETCFGIEICEDMWAPIPPSSALALKG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A +K +V+ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNMSADNEGISKHNYVRSLVSQQSARCLAGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 LA + F EQ ++E ++ + + +A+ P + Sbjct: 246 GTLLAESERFSFKEQLVISEIDVERLRGERLTNTTFAANIGNCPGRPAIHISTEFVNTRD 305 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E + + L + + V++G+SGG+DS L Sbjct: 306 LSLTRSIEAHPFVPQGKELDERCEEIFAIQIAGLAKRLVHTHCKTVVVGISGGLDSTLAL 365 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + ++ + I +P T+ ++ +A +LG + I + F+ Sbjct: 366 LVCAKTFDKLDLPRKGIIGITMPGFGTTDRTYNNALHLMASLGVTIKEISIKESCIQHFN 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + + EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 426 DINHDM--TVHDVTYENSQARERTQILMDVANQLGGLVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L +W +G+ + + I++ S EL P Q Sbjct: 484 MYGVNGSIPKTLVKYLVNWVA----LNGMDNESRITLLDIVDTPISPELIPADENGNIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + + I Y++ET++ + Sbjct: 540 KTEDLVGPYELHDFFLYQFLRFGFRPAKIFFLASIAFRDTYDEETIKKWLTIFCRRFFQQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 629 >gi|294673549|ref|YP_003574165.1| glutamine-dependent NAD+ synthetase [Prevotella ruminicola 23] gi|294471619|gb|ADE81008.1| glutamine-dependent NAD+ synthetase [Prevotella ruminicola 23] Length = 646 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 135/636 (21%), Positives = 240/636 (37%), Gaps = 97/636 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A A V D+ N+ + +A +G+++++F EL I+GY +DL ++ + Sbjct: 6 VNVAAAVPTVKVADVEYNVQQIESLIAQAEDRGVEVMVFPELCITGYSCQDLFKEQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L T ++VG P + N +L G ++ + K+ LPNY EF+ Sbjct: 66 HAEDGVVKLLDFTRKLNVIVIVGLPVVVNGLLYNCAAVLQGGQLLGIVPKVYLPNYGEFY 125 Query: 125 EKRTFISGY------------------SNDPIVF-RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S V ++ G+ ICED+W + +L Sbjct: 126 EKRWFASAQDLNATDIYFAGSPVHVSAEPQVFVTADGVKFGVEICEDVWAPTPPSNNLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K ++ Q + + +Y + G+ ++++ G + F Sbjct: 186 AGADVIFNLSASDELIGKHAYLKSLLAQQSARMISGYVYASCGFGESTQDVVYGGNAIIF 245 Query: 224 DGQQ-----------------QLAFQMKHFSEQNFMT-----------EWHYDQQLSQWN 255 + + Q+ Q H + T E + Sbjct: 246 ENGRLLEEGDRFSLLPQIKMCQIDVQALHVERRTNTTFINAQRNAHAREIACKATCQRPF 305 Query: 256 YMSDDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + + +IP E E N V+ L + N K +IG+SGG+DS L Sbjct: 306 ELFRNIDPYPFIPKSEDMQASCEEILNIQVMGLVKRLHHINGKKAVIGISGGLDSTLALL 365 Query: 311 IAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V A K + + I +P T+ ++ +A + LG + I V FS Sbjct: 366 VTVKAFDKLGLDRQGIVGITMPGFGTTDRTYNNALKLMETLGVTIREISIAAAVTQHFSD 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 ++ I EN Q+R R ILM ++N A+++ T + SE+++G+ T GD Sbjct: 426 INH--DASVHDITYENSQARERTQILMDVANKENAIVVGTGDLSELALGWATYNGDHMSM 483 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QT 478 + + KT + L + T L I++ S EL P Q Sbjct: 484 YGVNAGVPKTLIRYLVGYVAGEMATDTLM--------DIIDTPISPELIPADENGNIKQK 535 Query: 479 DQESLPPYPILDDIIKRIVENEESFI---------------NNDQEYNDETVRYVE---- 519 ++ + PY + D I + S Y++ET++ Sbjct: 536 TEDLVGPYELHDFFIYYFLRYGFSPKKIFLLAKRAFCTATSEKPALYDEETIKKWLTTFC 595 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 596 RRFFNQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 631 >gi|154485114|ref|ZP_02027562.1| hypothetical protein EUBVEN_02837 [Eubacterium ventriosum ATCC 27560] gi|149734067|gb|EDM50186.1| hypothetical protein EUBVEN_02837 [Eubacterium ventriosum ATCC 27560] Length = 637 Score = 478 bits (1231), Expect = e-132, Method: Composition-based stats. Identities = 131/634 (20%), Positives = 242/634 (38%), Gaps = 84/634 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A VGD N A+ + +E G L++F EL I+GY DL ++KS + Sbjct: 6 VKVAAATPKIKVGDCGYNGAQICKIIDEVYDNGAQLVVFPELCITGYTCSDLFWQKSMLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + D +VG P + + N ++ G I+ + K +PNYSEF+ Sbjct: 66 MAKTHLQFISEHCEDKEIVAIVGLPMIYRSKLYNVAAVIYDGEILGLVPKTYIPNYSEFY 125 Query: 125 EKRTFISGYSND-------------------PIVFRDIRLGILICEDIWKNSNICKHLKK 165 E R F SG + D + F + I ICED+W + Sbjct: 126 EARHFTSGKNKDGYVMIGEEEVPFGTEILFNCVNFENFSFAIEICEDLWVPNPPSTSHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R +V+GQ + IY + G+ +L+F G + Sbjct: 186 AGATVIANLSASDETTGKDIYRTGLVSGQSARTLSAYIYADAGEGESTTDLVFAGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + + Q K F Q + D+ ++ M+ Sbjct: 246 EN-GNILSQSKRFENQTIYADIDLDRLAAERAKMTTFIPDEELSYEEVEVELEPIDFEVE 304 Query: 259 ------DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 S + E + + L+ ++ N ++G+SGG+DS L + Sbjct: 305 RVIDNAPFVPSNTNEREKRCEEILSIQTMGLKKRLEHTNCKNAVVGISGGLDSTLALLVT 364 Query: 313 VDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A K N + + +P T+ ++ +A + + LGC + + I + + + Sbjct: 365 ARAFDKLNLDRKGIIAVTMPGFGTTDRTYTNAVSMIEKLGCTFKEVNISEATVLHMNQIE 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + + EN Q+R R +LM +N M++ T + SE+++G+ T GD + Sbjct: 425 HDIN--IHDVTYENAQARQRTYLLMDFANEHNGMVIGTGDMSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + + + +L+ S EL P Q ++ Sbjct: 483 VNAGVPKTLVRHLVKY----FSDTCEDKELSDVLNDVLDTPVSPELLPPKDGKIAQKTED 538 Query: 482 SLPPYPILDDIIKRIVE-----------NEESFINN-DQEYNDETVRYVEHLLYGSEYKR 529 + PY + D + I+ + +F +E + ++ + ++KR Sbjct: 539 LVGPYELHDFFLYYILRFGYTPTKIYFLAKMAFKGIYHKETILKWLKTFYRRFFSQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 P G K+ + D P R+ +++ Sbjct: 599 SCLPDGPKVGTVAVSPRGDLRMPSDGCVREWMNQ 632 >gi|260592513|ref|ZP_05857971.1| putative NH(3)-dependent NAD(+) synthetase [Prevotella veroralis F0319] gi|260535559|gb|EEX18176.1| putative NH(3)-dependent NAD(+) synthetase [Prevotella veroralis F0319] Length = 656 Score = 478 bits (1231), Expect = e-132, Method: Composition-based stats. Identities = 144/653 (22%), Positives = 253/653 (38%), Gaps = 103/653 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+A+ + A+ +G+++I F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPSVRVADTQFNLAEIEKQIAIADGKGVEIIAFPELSLTGYSCQDLFHQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AI +L T +VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 NVEQAILSLLDFTRKLDIITIVGAPVAVGSLLLNCALVIQQGKLLGIVAKTYLPNYSEFY 125 Query: 125 EKRTFISGYSNDP--IVF-----------------RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S P I F + + GI ICED+W + HL Sbjct: 126 EKRWFASSQDLRPKRIHFAGHHILVTPDMQIFRTPQGAKFGIEICEDVWAPTPPSNHLTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K + +++ Q + +Y G+ ++++ G +F + Sbjct: 186 AGAEIIFNLSASDELLGKHRYLKSLLSQQSARTICGYVYSGCGFGESTQDVVYGGNAFVY 245 Query: 224 DGQQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMS----------------------- 258 + L Q K F Q ++E ++ + S Sbjct: 246 EN-GLLLEQSKRFQIEPQLVISEIDVERLRGERRTNSTFVNAQRPTATGLSGISGHYGEL 304 Query: 259 -------------------DDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHK 294 ++P E + N V L + N + Sbjct: 305 ALTVDCQLQICPEREFSLTRQFEQHPFVPSTENMKDACDEILNIQVSGLAKRLVHTNCKR 364 Query: 295 VIIGLSGGIDSALCAAIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 +I+G+SGG+DS L +AV ++++ + +P T+ ++ ++A K LG Sbjct: 365 IIVGISGGLDSTLALLVAVKTFDTLGFDRKDIIGVTMPGFGTTDRTYQNAITLMKDLGVT 424 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + I V F + + EN Q+R R ILM LSN ++L T + S Sbjct: 425 IREINIASSVLQHFKDIEH--DASVHDVTYENSQARERTQILMDLSNQLGGLVLGTGDLS 482 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E+++G+ T GD + + KT L + SG+G T I++ Sbjct: 483 ELALGWCTYNGDHMSMYAVNVSVPKTLTQFLVRYVAE----SGVGESTRHTLIDIVDTPI 538 Query: 470 SAELRP-------HQTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQ-EY 510 S EL P Q ++ + PY + D + ++ + +F + Sbjct: 539 SPELTPADEKGDIAQKTEDIVGPYELHDFFLYYVLRCGFRPSKIYWLAQNAFHDVYADGV 598 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 +R + ++KR P G K+ + S D P D ++E Sbjct: 599 ILHWLRIFFCRFFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPTDAMSTDWLNE 651 >gi|260912484|ref|ZP_05919020.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633403|gb|EEX51557.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str. F0295] Length = 647 Score = 478 bits (1231), Expect = e-132, Method: Composition-based stats. Identities = 134/636 (21%), Positives = 243/636 (38%), Gaps = 93/636 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + AN QG ++++F EL I+GY +DL ++ I+ Sbjct: 6 IKVAAAIPAVKVADCHFNAEQTEQQIRLANEQGAEIVVFPELGITGYTCQDLFTQQLLIE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L T VVG P +LN V+ G I+ + K LPNYSEF+ Sbjct: 66 QAEQAVGSLLEKTQTLDIIAVVGVPVAVDSILLNCAVVFQRGRILGIVPKTYLPNYSEFY 125 Query: 125 EKRTFIS-------------------GYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F S S + ++ G+ ICED+W + +L Sbjct: 126 EKRWFASTHHLNDTSILYAGQQTLLTAQSQIFVTADGVKFGVEICEDVWAPNPPGTYLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ + +L+AS K ++ Q + +Y G+ ++++ G + + Sbjct: 186 AGADIVCNLSASDELIGKHTYLKSLLAQQSARTMAGYVYSGCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMS------------------------ 258 + + L + F Q ++E + ++ S Sbjct: 246 ENGKLLTQSKRFDFEPQIVISEIDIFKLRAERRTNSTYVNAQHGHTALLHTAQEPLINKP 305 Query: 259 ----DDSASTMYIPLQEEEAD-----YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P E+ D +N V L ++ + KV++G+SGG+DS L Sbjct: 306 FNLQRTIDPLPFVPQDEQMHDSCEEIFNIQVSGLAQRLKHIHASKVVLGISGGLDSTLAL 365 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V +E + + +P T+ ++ ++A + LG + I V F Sbjct: 366 LVCVRTFDKLGLPREGIIGVTMPGFGTTNRTYQNAINLMRELGITIREISIAKSVTQHFE 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + +V EN Q+R R ILM L N +++ T + SE+++G+ T GD Sbjct: 426 DIGHDIA--VHDVVYENGQARERTQILMDLGNKLGGIVVGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT + L + I++ S EL P Q Sbjct: 484 MYAVNVSIPKTLIKHLVRHVAQ----TMHNESACQTLYDIIDTPISPELIPADEAGNIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVEN-----------EESFI---NNDQEYNDETVRYV----E 519 ++ + PY + D I + + +F + Y+D+ +++ Sbjct: 540 KTEDLVGPYELHDFFIYHFLRHGFTPQRLYIMARHAFALPQQRAKHYSDDEIKHWLRVFL 599 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 600 RRFFAQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 635 >gi|315608286|ref|ZP_07883276.1| NAD synthetase [Prevotella buccae ATCC 33574] gi|315250067|gb|EFU30066.1| NAD synthetase [Prevotella buccae ATCC 33574] Length = 651 Score = 478 bits (1231), Expect = e-132, Method: Composition-based stats. Identities = 134/640 (20%), Positives = 246/640 (38%), Gaps = 98/640 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + A QG+++I+F EL I+GY +DL ++ ++ Sbjct: 6 IKVATAIPSVKVGDVKFNTRQIESQIALAEGQGVEIIVFPELCITGYTCQDLFLQQMLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +A+ L T +VG P + +LN I+ G I+ + K LPNY EF+ Sbjct: 66 SAETAMMMLLDFTRQLDIISIVGLPVVVGDLLLNCAAIIQHGKILGLVPKTYLPNYREFY 125 Query: 125 EKRTFISGYSND--PIVFRDIRL-----------------GILICEDIWKNSNICKHLKK 165 EKR F S + F R+ G+ CED+W + L Sbjct: 126 EKRWFASAQDLRETTVRFAGHRITVTPDPQIFITSEGAQFGVENCEDVWAPAPPSNKLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K ++ Q + IY + G+ +++F G + + Sbjct: 186 AGAELIFNLSASDELSGKHTYLKSLLAQQSARTITGYIYSSCGFGESTQDVVFGGNALIY 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD----------------------------------- 248 + L + + FS + M D Sbjct: 246 EN-GSLIAEGERFSLEPQMRIAQIDIEKLRSERRTNSTYVNAQRNVKYAIRSGRYSVHNI 304 Query: 249 ----QQLSQWNYMSDDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGL 299 + + + + +IP + E +N ++ + + +I+G+ Sbjct: 305 EMLAPFNRRDFVLEREIDAHPFIPHEAEMGVTCEEIFNIQLMGVAKRIVHTGAKHLILGI 364 Query: 300 SGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + V A + ++++ + +P T+ ++ +A +LG + Sbjct: 365 SGGLDSTLALLVCVKAFDKLGMNRKDIIGVTMPGFGTTDRTYRNAITLMGSLGVTIREIS 424 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I D V F + + + EN Q+R R ILM LSN +++ T + SE+++G Sbjct: 425 IADAVEQHFKDIGHDIS--VHDVTYENAQARERTQILMDLSNELGGIVVGTGDLSELALG 482 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT + + + SG+ + V I++ S EL Sbjct: 483 WATYNGDHMSMYGVNASVPKTLIQHMVRYVAE----SGVDEKSRVTLLDIVDTPISPELT 538 Query: 475 PH-------QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYV- 518 P Q ++ + PY + D + + + + Y++ V+ Sbjct: 539 PADESGEIRQKTEDLVGPYELHDFFLYYFLRFGFRPKKLFFLACRAFEGVYDEIIVQKWL 598 Query: 519 ---EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ S D P Sbjct: 599 VVFLRRFFSQQFKRSCLPDGPKVGNVSLSPRGDWRMPSDA 638 >gi|319642087|ref|ZP_07996753.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_40A] gi|317386353|gb|EFV67266.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_40A] Length = 641 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 127/630 (20%), Positives = 244/630 (38%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + A+ +G+ +I+F EL I+GY DL + ++ Sbjct: 6 VRVAAAIPIVKVADCKFNAQQIETQIAIADGKGVQIIIFPELSITGYTCADLFGQSLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T ++G P +LNS VI G I+ + K LPNY EF+ Sbjct: 66 EAEMALMQIMNNTRQMDIISIIGMPVVMNSTLLNSAVIFQKGKILGIVPKTYLPNYKEFY 125 Query: 125 EKRTFIS------------GYSNDP-----IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S G + + GI ICED+W L +G Sbjct: 126 EQRWFTSALNHPDANVRLCGQNVPVSANLLFDTPETCFGIEICEDMWAPIPPSSALALKG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A +K +V+ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNMSADNEGISKHNYVRSLVSQQSARCLAGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 LA + F EQ ++E ++ + + +A+ P + Sbjct: 246 GTLLAESERFSFKEQLVISEIDVERLRGERLTNTTFAANIGNCPGRPAIHISTEFVNTRD 305 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E + + L + + V++G+SGG+DS L Sbjct: 306 LSLTRSIEAHPFVPQGKELDERCEEIFAIQIAGLAKRLVHTHCKTVVVGISGGLDSTLAL 365 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + ++ + I +P T+ ++ +A +LG + I + F+ Sbjct: 366 LVCAKTFDKLDLPRKGIIGITMPGFGTTDRTYNNALHLMASLGVTIKEISIKESCIQHFN 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + + EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 426 DINHDM--TVHDVTYENSQARERTQILMDVANQLGGLVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L +W +G+ + + I++ S EL P Q Sbjct: 484 MYGVNGSIPKTLVKYLVNWVA----LNGMDNESRITLLDIVDTPISPELIPADENGNIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + + I Y++ET++ + Sbjct: 540 KTEDLVGPYELHDFFLYQFLRFGFRPAKIFFLASIAFRDTYDEETIKKWLTIFCRRFFQQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 629 >gi|254882573|ref|ZP_05255283.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 4_3_47FAA] gi|254835366|gb|EET15675.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 4_3_47FAA] Length = 654 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 127/630 (20%), Positives = 244/630 (38%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + A+ +G+ +I+F EL I+GY DL + ++ Sbjct: 19 VRVAAAIPIVKVADCKFNAQQIETQIAIADGKGVQIIIFPELSITGYTCADLFGQSLLLE 78 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T ++G P +LNS VI G I+ + K LPNY EF+ Sbjct: 79 EAEMALMQIMNNTRQMDIISIIGMPVVMNSTLLNSAVIFQKGKILGIVPKTYLPNYKEFY 138 Query: 125 EKRTFIS------------GYSNDP-----IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S G + + GI ICED+W L +G Sbjct: 139 EQRWFTSALNHPDANVRLCGQNVPVSANLLFDTPETCFGIEICEDMWAPIPPSSALALKG 198 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A +K +V+ Q + ++ + G+ +++F G ++ Sbjct: 199 AEIIFNMSADNEGISKHNYVRSLVSQQSARCLAGYVFSSSGFGESTTDVVFAGNGLIYEN 258 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 LA + F EQ ++E ++ + + +A+ P + Sbjct: 259 GTLLAESERFSFKEQLVISEIDVERLRGERLTNTTFAANIGNCPGRPAIHISTEFVNTRD 318 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E + + L + + V++G+SGG+DS L Sbjct: 319 LSLTRSIEAHPFVPQGKELDERCEEIFAIQIAGLAKRLVHTHCKTVVVGISGGLDSTLAL 378 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + ++ + I +P T+ ++ +A +LG + I + F+ Sbjct: 379 LVCAKTFDKLDLPRKGIIGITMPGFGTTDRTYNNALHLMASLGVTIKEISIKESCIQHFN 438 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + + EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 439 DINHDM--TVHDVTYENSQARERTQILMDVANQLGGLVIGTGDLSELALGWATYNGDHMS 496 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L +W +G+ + + I++ S EL P Q Sbjct: 497 MYGVNGSIPKTLVKYLVNWVA----LNGMDNESRITLLDIVDTPISPELIPADENGNIKQ 552 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + + I Y++ET++ + Sbjct: 553 KTEDLVGPYELHDFFLYQFLRFGFRPAKIFFLASIAFRDTYDEETIKKWLTIFCRRFFQQ 612 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 613 QFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 642 >gi|255523359|ref|ZP_05390329.1| NAD+ synthetase [Clostridium carboxidivorans P7] gi|296188293|ref|ZP_06856685.1| NAD+ synthetase [Clostridium carboxidivorans P7] gi|255513013|gb|EET89283.1| NAD+ synthetase [Clostridium carboxidivorans P7] gi|296047419|gb|EFG86861.1| NAD+ synthetase [Clostridium carboxidivorans P7] Length = 637 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 130/633 (20%), Positives = 237/633 (37%), Gaps = 88/633 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V DI N+ + A QG L++F EL I+ Y DL +++ + Sbjct: 7 IRVAAASPITNVADIKFNLKNIVNCIDNAIEQGSKLVVFPELCITSYTCADLFWQQLLLN 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + S + + I VG P + N I+ G ++ + K +PNY+EF+ Sbjct: 67 EAIDGVEHICSYSKEKDILIAVGAPLIHNNCLYNCAYIIFNGKVLGIVPKSYIPNYTEFY 126 Query: 125 EKRTFISG------------------YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G +N D + G ICED+W +L Sbjct: 127 EKRWFTEGIGIVNKKVNLFFQEEIPFGTNLIFACGDFKFGFEICEDLWVTIPPSSYLSLM 186 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +L+AS +K R ++V Q + IY + + +L+F G + Sbjct: 187 GANIIGNLSASNEIVSKADYRKDLVKAQSARCMASYIYASSGVFESTTDLVFSGDLLISE 246 Query: 225 GQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQLSQW 254 L + E +T + +++ + + Sbjct: 247 NGSLLQHNNRFQRENEVITSIVDVNKLNSERLRNVSFRDSTRLIPVEPLQINFEFENLDY 306 Query: 255 NYMSDDSASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P + +N L + K ++G+SGG+DS L Sbjct: 307 KNFDRYIDKHPFVPSNKAERDIRCKEIFNIQTSGLAKRISHTGVKKAVVGISGGLDSTLA 366 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + + EN+ T+ +P T+ ++ +A K LG ++ + I F Sbjct: 367 LLVMIKTFRMLNIQSENIITVTMPGFGTTDRTYNNAVNLCKKLGTEFREINIVPACLQHF 426 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 +S + E + EN+Q+R R ILM ++N +L+ T + SE+++G+ T GD Sbjct: 427 KDISHDV--EKHDVTYENVQARERTQILMDIANKEGGLLIGTGDLSELALGWCTYNGDHM 484 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------H 476 + + KT V L + + + I IL+ S EL P Sbjct: 485 SMYGVNCSIPKTLVRYLVKYVAETEVPKDISD----ILMDILDTPVSPELLPKDKNGEIA 540 Query: 477 QTDQESLPPYPILDDIIKRIVEN-----------EESFINN-DQEYNDETVRYVEHLLYG 524 Q ++ + PY + D + + +E+F ++ D E ++ + Sbjct: 541 QKTEDIVGPYELHDFFLYNFIRQGAEPNKILFLAKEAFKDDYDNEIIEKWFEKFIKRFFT 600 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P + Sbjct: 601 QQFKRSAIPDGPKVGTVSLSPRGDFRMPSDASY 633 >gi|255692263|ref|ZP_05415938.1| glutamine-dependent NAD+ synthetase [Bacteroides finegoldii DSM 17565] gi|260621994|gb|EEX44865.1| glutamine-dependent NAD+ synthetase [Bacteroides finegoldii DSM 17565] Length = 641 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 134/639 (20%), Positives = 245/639 (38%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +ILF E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIILFPEMSITGYTCGDLFSQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V + G I+ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVIVNSTVINAAVTIQKGKILGVTAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLRTETVRLCGQVVPIGANLLFETSDTTFGIEICEDLWATIPPGSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNMSADNEGIGKHSYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMSDDSAS-------------------- 263 L Q + F EQ ++E ++ ++ + +AS Sbjct: 246 -GTLLAQSERFSMEEQLVVSEIDVERIRAERRVNTTFAASQANLEGKRAIAIATEFVNSK 304 Query: 264 ----------TMYIP-----LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P + E ++ V L + ++G+SGG+DS L Sbjct: 305 ELNLTRKFNAHPFVPQDNELHEHCEEVFSIQVAGLTQRLVHTGAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V ++ + I +P T+ ++ +A +LG + I D F Sbjct: 365 LLVCVKTFDKLGWSRKGILGITMPGFGTTDRTYHNAVNLMNSLGISIREISIKDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIDHDVN--VHDVTYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W +G+ ++ I++ S EL P Sbjct: 483 SMYGVNAGVPKTLVKYLVQWVAKNGV----DEESKATLLDIVDTPISPELIPADENGDIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + I Y++ET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIYYLANIAFGGVYDEETIKKWLSTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 ++KR P G K+ + S D P F + E Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDASFAMWLKE 637 >gi|298384535|ref|ZP_06994095.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_14] gi|298262814|gb|EFI05678.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 1_1_14] Length = 641 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 128/631 (20%), Positives = 241/631 (38%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+ + A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNVERIESQIAIAEGKGVQIIVFPEMSITGYTCGDLFGQQILLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S N D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTEDTVRLCGQIVPIGANLLFETSDTTFGIEICEDLWATIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNMSADNEGIGKHHYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMS------------------------- 258 L + K F EQ ++E ++ ++ + Sbjct: 246 -GSLLARSKRFCMEEQLIISEIDVERIRAERRINTTFAASQGNPGDKKAISVATEFINSK 304 Query: 259 -----DDSASTMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 D S ++P + E ++ + L + ++G+SGG+DS L Sbjct: 305 ELTLTRDFNSHPFVPQGAELDEHCEEVFSIQIAGLAQRLVHTKAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V ++++ + +P T+ ++ +A K+LG + I D F Sbjct: 365 LLVCVKTFDKLGLPRKDILGVTMPGFGTTDRTYNNAIDLMKSLGISIREISIQDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIDHDIN--VHDVTYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + + + I++ S EL P Sbjct: 483 SMYGVNGSIPKTLVKYLVQWVAEN----DMDEDAKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + I Y+ ET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIYYLANIAFKDVYDKETIKKWLSTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|189463554|ref|ZP_03012339.1| hypothetical protein BACCOP_04278 [Bacteroides coprocola DSM 17136] gi|189429657|gb|EDU98641.1| hypothetical protein BACCOP_04278 [Bacteroides coprocola DSM 17136] Length = 644 Score = 477 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 127/633 (20%), Positives = 241/633 (38%), Gaps = 90/633 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + EA+ +G+ +I+F EL ++GY DL + ++ Sbjct: 6 VKVAAAIPLVKVADCQFNAQQTSKLIVEADSKGVQVIIFPELNLTGYSCGDLFGQTLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T +VG P ++N V+ G I+ + K LPNY EF+ Sbjct: 66 QAEIALMQVMNETRQLDIISIVGMPVVVNSTLMNCAVVCQRGKILGIVPKTYLPNYKEFY 125 Query: 125 EKRTFIS-------------GYSNDP-----IVFRDIRLGILICEDIWKNSNICKHLKKQ 166 E+R F G D+ G+ ICED+W HL + Sbjct: 126 EQRWFAPSTAHADDEMVRICGQHVPVSSDLIFESTDLCFGVEICEDVWATIPPSSHLALK 185 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA+ +F+++A +K + ++ Q + ++ + G+ +++F G + ++ Sbjct: 186 GADVIFNMSADTENISKHQYLRSLLAQQSARCLAGYVFASSGFGESTTDVVFAGNALIYE 245 Query: 225 GQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 LA + F EQ ++E ++ + + +A Sbjct: 246 NGTLLAASERFSFEEQLVVSEIDIERLRGERMVNTTFAASVRTYKDYPVKRIPIEMTKAN 305 Query: 263 ----------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++P + E ++ V L + V++G+SGG+DS Sbjct: 306 EDFTLTRAVEPHPFVPAGGKLLDERCEEIFSIQVAGLAKRLVHTGCKTVVVGISGGLDST 365 Query: 307 LCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + V K + + I +P T+ ++ +A +L + I D Sbjct: 366 LALLVCVKTFDKLGLSRKGIVGITMPGFGTTDRTYHNALDLMSSLQVTTKEISIRDACIQ 425 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + + EN Q+R R ILM +N +++ T + SE+++G+ T GD Sbjct: 426 HFKDIDHDIS--VHDVTYENGQARERTQILMDYANKVGGLVIGTGDLSELALGWATYNGD 483 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH----- 476 + + KT V L +W +G+ + I++ S EL P Sbjct: 484 HMSMYGVNASIPKTLVRYLVTWVAE----TGVDEKSRATLLDIIDTPISPELIPADENGN 539 Query: 477 --QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLL 522 Q ++ + PY + D + + + I Y+ ET++ Sbjct: 540 IKQKTEDLVGPYELHDFFLFHFLRFGSRPAKIFYLAEIAFRDVYDKETIKKWLVNFCRRF 599 Query: 523 YGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 600 FNQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 632 >gi|218129931|ref|ZP_03458735.1| hypothetical protein BACEGG_01514 [Bacteroides eggerthii DSM 20697] gi|317476849|ref|ZP_07936092.1| NAD+ synthetase [Bacteroides eggerthii 1_2_48FAA] gi|217988041|gb|EEC54366.1| hypothetical protein BACEGG_01514 [Bacteroides eggerthii DSM 20697] gi|316907024|gb|EFV28735.1| NAD+ synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 641 Score = 477 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 132/630 (20%), Positives = 239/630 (37%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + A+ +G+ +I+F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRIKVADCKFNAGQIEKEIIIADGKGVQIIVFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G I+ V K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQMDIISILGMPVPLNGMLLNTAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S N D GI ICED+W L QG Sbjct: 126 EKRWFASACEVSETTARLCGQVVPMGRNLLFETADTTFGIEICEDLWAPIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNLSADNEGIGKHAYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 LA + F Q ++E + ++ + +A Sbjct: 246 GTLLAGSERFSFEGQLVVSEIDVEHIRTERRVNTTFAACHANCAPEIPVRISTEYVNSGD 305 Query: 263 --------STMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P E ++ V L + N ++G+SGG+DS L Sbjct: 306 LNLTRTFEPHPFVPQGPVLDERCEEVFSIQVSGLAQRLVHTNAKSAVVGISGGLDSTLAL 365 Query: 310 AIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V ++ + + +P T+ ++ +A +LG + I D F Sbjct: 366 LVCVKTFDKLGWDRKGIIGVTMPGFGTTDRTHTNAVDLMTSLGVTMREVCIKDACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDIN--VHDVVYENSQARERTQILMDIANQTWGMVVGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + + + I++ S EL P Q Sbjct: 484 MYGVNSSIPKTLVKHLVKWVAEN----DMDEASRATLLDIVDTPISPELIPADENGNIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + Y++ET+R + Sbjct: 540 ITEDLVGPYELHDFFLYYFLRCGFRPSKIFFLAARTFKDVYDEETIRKWLQTFCRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|212694156|ref|ZP_03302284.1| hypothetical protein BACDOR_03682 [Bacteroides dorei DSM 17855] gi|237710209|ref|ZP_04540690.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 9_1_42FAA] gi|237727711|ref|ZP_04558192.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D4] gi|265751017|ref|ZP_06087080.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_33FAA] gi|212663376|gb|EEB23950.1| hypothetical protein BACDOR_03682 [Bacteroides dorei DSM 17855] gi|229434567|gb|EEO44644.1| glutamine-dependent NAD+ synthetase [Bacteroides dorei 5_1_36/D4] gi|229455671|gb|EEO61392.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 9_1_42FAA] gi|263237913|gb|EEZ23363.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_33FAA] Length = 641 Score = 477 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 126/630 (20%), Positives = 239/630 (37%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + A+ +G+ +I+F EL I+GY DL + ++ Sbjct: 6 VRVAAAIPIVKVADCKFNAQQIETQIAIADGKGVQIIIFPELSITGYTCADLFGQSLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T +VG P +LNS V+ G I+ + K LPNY EF+ Sbjct: 66 EAEMALMQIMNNTRQMDIVSIVGMPVVMNSTLLNSAVVFQKGKILGIVPKTYLPNYKEFY 125 Query: 125 EKRTFIS------------GYSNDP-----IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S G + + GI ICED+W L +G Sbjct: 126 EQRWFTSALNHPDGNVRLCGQNVPVSANLLFDTPETCFGIEICEDMWAPIPPSSALALKG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+++A K +V+ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNMSADNEGIGKHNYVRSLVSQQSARCLAGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 L + F EQ ++E ++ + + +A+ P + Sbjct: 246 GTLLTESERFSFKEQLVISEIDVERLRGERLTNTTFAANIGNCPGRPAIHISTEFVNTRD 305 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E + + L + + V++G+SGG+DS L Sbjct: 306 LSLTRSIEAHPFVPQGKELDERCEEIFAIQIAGLAKRLVHTHCKTVVVGISGGLDSTLAL 365 Query: 310 AIAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + K N + I +P T+ ++ +A +LG + I + F+ Sbjct: 366 LVCAKTFDKLNLPRKGIIGITMPGFGTTDRTYNNALHLMASLGVTIKEISIKESCIQHFN 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + + EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 426 DIDHDM--TIHDVTYENSQARERTQILMDVANQLSGLVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L +W + + + + I++ S EL P Q Sbjct: 484 MYGVNGSIPKTLVKYLVNWVA----LNDMDNESRITLLDIVDTPISPELIPADENGNIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + + I Y++ T++ + Sbjct: 540 KTEDLVGPYELHDFFLYQFLRFGFRPAKIFFLASIAFRDTYDEATIKKWLTIFCRRFFQQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 629 >gi|237722311|ref|ZP_04552792.1| glutamine-dependent NAD synthetase [Bacteroides sp. 2_2_4] gi|293372030|ref|ZP_06618429.1| NAD+ synthetase [Bacteroides ovatus SD CMC 3f] gi|229448121|gb|EEO53912.1| glutamine-dependent NAD synthetase [Bacteroides sp. 2_2_4] gi|292633041|gb|EFF51623.1| NAD+ synthetase [Bacteroides ovatus SD CMC 3f] Length = 641 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 131/631 (20%), Positives = 244/631 (38%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 L + + FS EQ ++E ++ ++ + +A Sbjct: 246 -GSLLARSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSK 304 Query: 263 ---------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++P + E ++ V L + ++G+SGG+DS L Sbjct: 305 ELTLTRKFNAHPFVPQGIELNEHCEEIFSIQVAGLAQRLVHTGAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K + + I +P T+ ++ +A K+LG + I D F Sbjct: 365 LLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIEHDMN--VHDVTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + G+ ++ I++ S EL P Sbjct: 483 SMYGVNASVPKTLVKYLVQWVAEN----GMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + Y++ET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIFYLAKTTFKDMYDEETIKKWLSTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|160883261|ref|ZP_02064264.1| hypothetical protein BACOVA_01230 [Bacteroides ovatus ATCC 8483] gi|156111245|gb|EDO12990.1| hypothetical protein BACOVA_01230 [Bacteroides ovatus ATCC 8483] Length = 641 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 134/630 (21%), Positives = 246/630 (39%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ ++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAAVIQKGKVLGVTAKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S SN D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGSNLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G F ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGFIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 LA + EQ ++E ++ ++ + +A Sbjct: 246 GSLLAHSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSKE 305 Query: 263 --------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 S ++P + E ++ V L + +IG+SGG+DS L Sbjct: 306 LTLTRKFNSHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVIGISGGLDSTLAL 365 Query: 310 AIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V K +++ I +P T+ ++ +A K+LG + I D F Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHNIN--VHDVTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + G+ ++ I++ S EL P Q Sbjct: 484 MYGVNASVPKTLVKYLVQWVAVN----GMDENSKATLLDIVDTPISPELIPADENGEIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + I Y+++T++ + Sbjct: 540 KTEDLVGPYELHDFFLYYFLRFGFRPSKIFYLANIAFKDMYDEKTIKKWLSTFFRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|237715911|ref|ZP_04546392.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D1] gi|262407524|ref|ZP_06084072.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 2_1_22] gi|294808853|ref|ZP_06767582.1| NAD+ synthetase [Bacteroides xylanisolvens SD CC 1b] gi|229443558|gb|EEO49349.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D1] gi|262354332|gb|EEZ03424.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 2_1_22] gi|294443895|gb|EFG12633.1| NAD+ synthetase [Bacteroides xylanisolvens SD CC 1b] Length = 641 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 131/631 (20%), Positives = 244/631 (38%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLITVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 L + + FS EQ ++E ++ ++ + +A Sbjct: 246 -GSLLARSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSK 304 Query: 263 ---------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++P + E ++ V L + ++G+SGG+DS L Sbjct: 305 ELTLTRKFNAHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K + + I +P T+ ++ +A K+LG + I D F Sbjct: 365 LLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIEHDVN--VHDVTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + G+ ++ I++ S EL P Sbjct: 483 SMYGVNASVPKTLVKYLVQWVAEN----GMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + Y++ET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIFYLARTTFKDTYDEETIKKWLSTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|313113491|ref|ZP_07799080.1| NAD+ synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310624218|gb|EFQ07584.1| NAD+ synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 641 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 134/626 (21%), Positives = 235/626 (37%), Gaps = 83/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK A V D A N+ + A +A +G+ L +F E ++GY DL +++ Sbjct: 6 LKAAALSPALRVADCAYNVRQITDALHKAAARGVKLAVFPEFCLTGYTCGDLFLQRTLQT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ TL +T +VG P + N +L G I+ + K LPNY EF+ Sbjct: 66 GALDALSTLLEETKALDVVTLVGLPLLVHGKLYNCAAVLCHGRILGLVPKTYLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIV--------------FRD-----IRLGILICEDIWKNSNICKHLKK 165 EKR F G + +V FR LG+ ICED+W Sbjct: 126 EKRQFTPGSTEVELVEVCGQQVPFGTSLLFRCRQMPSFVLGVEICEDLWSALPPSTFHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R +V+ Q + + +Y + G+ +++F G Sbjct: 186 AGATVIANLSASDETVGKAEYRRALVSNQSARLLCGYLYASAGHGESTQDMVFAGHDLIA 245 Query: 224 DGQQQL-----------------------AFQMKHFS---EQNFMTEWHYDQQLSQWNYM 257 + L + F E E+ + + Sbjct: 246 ENGTILAENAPFDGGCAETEIDCQRMEAERARNTSFELSGEGYQTVEFDLEPAETTLTRW 305 Query: 258 SDDSASTMYIPLQEEEADYNACVL---SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 D + P + E + L + + +IG+SGG+DS L +AV Sbjct: 306 IDPAPFVPGDPKRRAERCELILKMQADGLAKRLDHAHAKTAVIGISGGLDSCLALLVAVR 365 Query: 315 AL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+ +V + +P T+ ++ +A L + + I + V+ F+ + Q Sbjct: 366 AMKQLGRPARDVLAVTMPCFGTTKRTRSNAEILCDELQVSFKEIDIANTVHSHFADIGQ- 424 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 E + EN Q+R+R LM +N + +++ T + SE+++G+ T GD + Sbjct: 425 -DESVLDVTFENGQARVRTLELMDTANRTGGLVVGTGDLSELALGWATYNGDHMSMYGVN 483 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESL 483 + KT V L + T L + IL+ S EL P Q ++ + Sbjct: 484 AGVPKTLVRHLVRYEADIAATDAL----RTVLLDILDTPVSPELLPAKDGEIAQKTEDLV 539 Query: 484 PPYPILDDIIKRIV----------ENEESFINNDQEYND----ETVRYVEHLLYGSEYKR 529 PY + D + +++ ++ EY D + +R + ++KR Sbjct: 540 GPYELHDFYLYQVLRFGFGPAKIFRLAKTAFAGRPEYPDSVLYKWLRNFYWRFFAQQFKR 599 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 600 SCLPDGPKVGSVTLSPRGDWRMPSDA 625 >gi|260171023|ref|ZP_05757435.1| NAD synthetase [Bacteroides sp. D2] gi|315919343|ref|ZP_07915583.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D2] gi|313693218|gb|EFS30053.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D2] Length = 641 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 134/630 (21%), Positives = 246/630 (39%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ ++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAAVIQKGKVLGVTAKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S SN D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGSNLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G F ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGFIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 LA + EQ ++E ++ ++ + +A Sbjct: 246 GSLLAHSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSKE 305 Query: 263 --------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 S ++P + E ++ V L + +IG+SGG+DS L Sbjct: 306 LTLTRKFNSHPFVPQGIELNEHCEEVFSIQVAGLAQRLIHTGAKTAVIGISGGLDSTLAL 365 Query: 310 AIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V K +++ I +P T+ ++ +A K+LG + I D F Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHNIN--VHDVTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + G+ ++ I++ S EL P Q Sbjct: 484 MYGVNASVPKTLVKYLVQWVAVN----GMDENSKATLLDIVDTPISPELIPADENGEIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + I Y+++T++ + Sbjct: 540 KTEDLVGPYELHDFFLYYFLRFGFRPSKIFYLANIAFKDMYDEKTIKKWLSTFFRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|298483704|ref|ZP_07001878.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D22] gi|298270121|gb|EFI11708.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. D22] Length = 641 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 131/631 (20%), Positives = 244/631 (38%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLITVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLATNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 L + + FS EQ ++E ++ ++ + +A Sbjct: 246 -GSLLARSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSK 304 Query: 263 ---------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++P + E ++ V L + ++G+SGG+DS L Sbjct: 305 ELTLTRKFNAHPFVPQGIELNEHCEEIFSIQVAGLAQRLVHTGAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K + + I +P T+ ++ +A K+LG + I D F Sbjct: 365 LLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIEHDMN--VHDVTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + G+ ++ I++ S EL P Sbjct: 483 SMYGVNASVPKTLVKYLVQWVAEN----GMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + Y++ET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIFYLAKTTFKDMYDEETIKKWLSTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|295087593|emb|CBK69116.1| NH(3)-dependent NAD(+) synthetase [Bacteroides xylanisolvens XB1A] Length = 641 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 131/631 (20%), Positives = 243/631 (38%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLITVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 L + + FS EQ ++E ++ ++ + +A Sbjct: 246 -GSLLARSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSK 304 Query: 263 ---------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++P + E ++ V L + ++G+SGG+DS L Sbjct: 305 ELTLTRKFNAHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K + I +P T+ ++ +A K+LG + I D F Sbjct: 365 LLVCVKTFDKLGLSRNGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIEHDMN--VHDVTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + G+ ++ I++ S EL P Sbjct: 483 SMYGVNASVPKTLVKYLVQWVAEN----GMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + Y++ET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIFYLARTTFKDTYDEETIKKWLSTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|238060379|ref|ZP_04605088.1| NAD+ synthetase [Micromonospora sp. ATCC 39149] gi|237882190|gb|EEP71018.1| NAD+ synthetase [Micromonospora sp. ATCC 39149] Length = 536 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 191/542 (35%), Positives = 280/542 (51%), Gaps = 51/542 (9%) Query: 58 FKKSFIQACSSAIDTLKSDTHDGGAG---IVVGFPRQDQ-----------EGVLNSVVIL 103 F++SF+ A +A+ L +D G G +VVG+ D G N+ +L Sbjct: 2 FRRSFVAASQAALRRLAADLAADGLGGLPVVVGYLDADGPPQVSSDAEPGRGARNAAAVL 61 Query: 104 DAGNIIAVRDKINLPNYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHL 163 G ++A K +LPNY F E R F+ G + + + + + ICED+W+ Sbjct: 62 HGGEVVATYFKHHLPNYGVFDEDRYFVPGDTLTVVRVGGVDVALTICEDMWQAGGPFAAA 121 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCF 223 ++ G + ++N SPY NK R +V + + + YVN VGGQDEL+F+G S Sbjct: 122 RQAGVGLVVTINGSPYELNKDDIRLPLVRRRAAEAGATVAYVNMVGGQDELVFEGDSLIV 181 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHY---------------------------DQQLSQWNY 256 L + F E M + Sbjct: 182 GADGTLLARAPQFVEHLLMHDVELPAAAERAGGDGARAGGEVADGMRIVRATVGDVPPAP 241 Query: 257 MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 + + P+ +E + A VL LRDYV KN F V++GLSGGIDSA+ AA+AVDAL Sbjct: 242 GGAAAVGGIIEPVADEAEVWQALVLGLRDYVDKNRFPSVVLGLSGGIDSAVVAALAVDAL 301 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 G V + LP +++S S DA AK G Y V PI +V+ F + MS SG Sbjct: 302 GPGRVVGVSLPSQHSSEHSRADAEDLAKRTGLDYRVAPIQPMVDTFLANMS------LSG 355 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 + EN+Q+R+RG +LMALSN ++LTT NKSE++VGY TLYGD GGFNP+KD++KT Sbjct: 356 VAVENLQARVRGVLLMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGFNPVKDVWKTL 415 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 +++LA WRN+ G P IP + + K PSAEL P Q D ++LP Y +LD I+ Sbjct: 416 IWRLAKWRNADAARRGETP---PIPENSIGKPPSAELSPGQLDSDTLPDYDVLDPILIGY 472 Query: 497 VENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ + + ++ + V ++ +EYKRRQ+ GTKI+ K+FGRDR PI+N++ Sbjct: 473 IDGDLGRTGLVESGHDPAIIDRVLRMVDTAEYKRRQSAPGTKISMKAFGRDRRLPITNRW 532 Query: 556 RD 557 R+ Sbjct: 533 RE 534 >gi|299146343|ref|ZP_07039411.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_23] gi|298516834|gb|EFI40715.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_23] Length = 641 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 135/630 (21%), Positives = 247/630 (39%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLIAVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQLDIISIVGMPVGVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S SN D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNSVRLCGQIVPIGSNLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G F ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGFIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 LA + EQ ++E ++ ++ + +A Sbjct: 246 GSLLAHSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSKE 305 Query: 263 --------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 S ++P + E ++ V L + +IG+SGG+DS L Sbjct: 306 LTLTRKFNSHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVIGISGGLDSTLAL 365 Query: 310 AIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V K +++ I +P T+ ++ +A K+LG + I D F Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHNIN--VHDVTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + G+ ++ I++ S EL P Q Sbjct: 484 MYGVNASVPKTLVKYLVQWVAVN----GMDENSKATLLDIVDTPISPELIPADENGEIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + I Y+++T++ + Sbjct: 540 KTEDLVGPYELHDFFLYYFLRFGFRPSKIFYLANIAFKDMYDEKTIKKWLSTFFRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|225377677|ref|ZP_03754898.1| hypothetical protein ROSEINA2194_03328 [Roseburia inulinivorans DSM 16841] gi|225210472|gb|EEG92826.1| hypothetical protein ROSEINA2194_03328 [Roseburia inulinivorans DSM 16841] Length = 640 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 127/633 (20%), Positives = 250/633 (39%), Gaps = 85/633 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K+ +K+A VV D N A ++A ++G +I+ EL I+GY DL + Sbjct: 1 MKQGFVKVAAVTPKIVVADTKENTALICAEIKKAEKEGAKIIVLPELCITGYTCSDLFLQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + ++ ++ + + T + VG P + + N + G ++ K LPN Sbjct: 61 EKMLREARQSLLEIAAFTFALDCIVFVGLPLEYNGKLYNVAAAVSNGKVLGFVPKTYLPN 120 Query: 120 YSEFHEKRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNIC 160 Y+EF+E R F G ++++G+ +CED+W Sbjct: 121 YNEFYEARHFTRGMEEMVQVSLGEEVVPMGKKLLFTCQTMPELKIGVELCEDLWTPEPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 GA + +L+AS K R E+V GQ + + IY + G+ ++++ Sbjct: 181 IRHALNGANVIVNLSASDETTGKDIYREELVGGQSARLLCGYIYASAGDGESTQDVVYSA 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD------------------ 260 + + + L + K F+ + +E + ++ M+ Sbjct: 241 HNIIAENGRILK-KAKRFANETVYSEIDVLRLNAERRRMTTFETRMDGYTEIPFALKIEE 299 Query: 261 ------SASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P + + + + L+ ++ + +IG+SGG+DS L Sbjct: 300 TELTRYIDPMPFVPGSKTDRERRCDEILSIQAMGLKKRLEHTHCKSAVIGISGGLDSTLA 359 Query: 309 AAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V A + +N++ + +P T+ ++ ++A + K L + + I D VN F Sbjct: 360 LLVTVRAFDLLGMDHKNIKAVTMPGFGTTDRTYDNAVSLIKCLNADFMEVSIRDAVNIHF 419 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + Q + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 420 RDIGQ--DPKVHDVTYENGQARERTQILMDIANKTGGMVIGTGDLSELALGWATYNGDHM 477 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQ 477 + + KT V L + L E + +L+ S EL P Q Sbjct: 478 SMYAVNASVPKTLVRHLVRYYADTCGDEAL----EAVLLDVLDTPVSPELLPPEDGKISQ 533 Query: 478 TDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV----RYVEHLLYGS 525 ++ + PY + D + ++ + + Y+DET+ + + Sbjct: 534 KTEDLVGPYELHDFYLYHMLRLGYAPAKIYRLAKVAFVGTYDDETILKWLKTFYRRFFAQ 593 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISNKFR 556 ++KR P G K+ + + D P R Sbjct: 594 QFKRSCLPDGPKVGSVAVSPRGDLRMPSDASAR 626 >gi|110801895|ref|YP_698452.1| NAD synthetase [Clostridium perfringens SM101] gi|110682396|gb|ABG85766.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens SM101] Length = 635 Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats. Identities = 135/640 (21%), Positives = 255/640 (39%), Gaps = 88/640 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+ A + D N+ + A + + +++F EL IS Y DL + Sbjct: 1 MDFIKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNEK 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ C+ AI L + I VG P + + N I+ G ++ + K +PNYS Sbjct: 61 LIENCNLAIKNLVEFSKGKDILIAVGAPFLYRYSLYNCAYIILNGELLGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISGY------------------SNDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G+ ++ F+++++G ICED+W +L Sbjct: 121 EFYEKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V Q + IY + + +L+F G Sbjct: 181 ALMGANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIYSSAGVHESTTDLLFSGHMI 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQL 251 + + + E + +T ++ + Sbjct: 241 IAENGTIIKENNRFKRENDLLTGIVDLFKLNAERIKNISFRNSTFNENNDPKFIPFNLEN 300 Query: 252 SQWNYMSDDSASTMYIPLQEEEADY------NACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++ + ++P + + N +L ++ N K +IG+SGG+DS Sbjct: 301 TEIKNFDREIDKHPFLPKSQYAMEERCEEILNIQAAALAKRLEHTNLKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 361 TLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELNCDFREINIVNAAL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T G Sbjct: 421 QHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L ++ +H I++ IL+ S EL P Sbjct: 479 DHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEA----LLDILDTPVSPELLPKDKEG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEES-----FINNDQ---EYNDETVRYV----EHL 521 Q ++ + PY + D + +++ S F+ + +Y++ET++ Sbjct: 535 KIAQKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKNDYDEETLKKWLDKFIRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHI 559 + ++KR P G K+ + S D P + D + Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDAVYNDFL 634 >gi|169349679|ref|ZP_02866617.1| hypothetical protein CLOSPI_00417 [Clostridium spiroforme DSM 1552] gi|169293754|gb|EDS75887.1| hypothetical protein CLOSPI_00417 [Clostridium spiroforme DSM 1552] Length = 636 Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats. Identities = 137/631 (21%), Positives = 247/631 (39%), Gaps = 80/631 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA A + + DI N + + E+A +I+F EL ++GY EDL + + Sbjct: 8 IRIAAASFDTNIADIKNNSLQICKLIEQAYENKAKIIVFPELCLTGYTCEDLFNQDRLLN 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + T + +VVG P Q + N I+ +G ++ + K ++PNY EF+ Sbjct: 68 EAKFQLQNIIEKTINKDIIVVVGLPYQHLNSLYNVAAIIHSGKLLGLVPKTHVPNYQEFY 127 Query: 125 EKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKK 165 E R F S + VF + + G+ ICED+W L Sbjct: 128 EARRFEKAPSKNTTVFFNGQTTPFGTKYIFASSTNCEFKFGVEICEDLWLPDAPSIDLAL 187 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +V Q + + +Y N G+ +++F G Sbjct: 188 NGATLILNPSASNEITTKKDYRRLLVKSQSARLICGYVYCNAGNGESTTDVVFSGHHIIS 247 Query: 224 DGQQQLAFQM--------------KHFSEQNFMTEW--------------HYDQQLSQWN 255 + + K SE+ MT + + D + + Sbjct: 248 ENGTIINESQGFNSEIIYGDLDLKKLSSERRKMTTFKSKDEYETIYFDSTNIDLDTTYYY 307 Query: 256 YMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA 315 + + + + + ++ L ++ N KV+IG+SGG+DS L + A Sbjct: 308 DPHPFVPNNLELREKRCKEVFDIQTYGLMQRLKATNIKKVVIGISGGLDSTLALLVCTMA 367 Query: 316 LGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL 370 K N + I +P T+ ++ +A K L + I + V F + Q Sbjct: 368 FKKLNYDTKDIIAITMPCFGTTSRTKNNALGLMKELNVTSYDIDISESVKIQFRDIEQ-- 425 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 E + EN+Q+R R ILM +N +++ T + SE+++G+ T GD + Sbjct: 426 DETIHDVTYENVQARTRTEILMNKANQVGGLVIGTGDLSEVALGWSTYNGDHMSMYAVNV 485 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQESLP 484 + KT V L + +S G E I +L+ S EL P Q ++ + Sbjct: 486 SVPKTLVRYLVDYVSSLYR----GQKLEAILKDVLDTPVSPELLPQQDDKIVQKTEDIVG 541 Query: 485 PYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYKRRQA 532 PY + D I ++ ++ + +Y++ET++ + ++KR Sbjct: 542 PYELHDFFIYHMIRFSDEPKKLLRKTKLAFKDKYDNETIKKWLIKFYWRFFTQQFKRSCI 601 Query: 533 PVGTKITAKSFGR--DRLYPISNKFRDHISE 561 P G K+ + S D P ++ I E Sbjct: 602 PDGPKVGSVSLSPRGDWRMPSDASVKEWIHE 632 >gi|327313508|ref|YP_004328945.1| NAD+ synthase [Prevotella denticola F0289] gi|326945439|gb|AEA21324.1| NAD+ synthase [Prevotella denticola F0289] Length = 656 Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats. Identities = 142/652 (21%), Positives = 240/652 (36%), Gaps = 101/652 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+A+ + A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPAVKVADTKFNLAETEKQIAIAEGKGVEVIVFPELSLTGYSCQDLFHQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L TH +VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 DAEQAVLSLLDFTHQLDITAIVGAPVAVGPLLLNCALVIQQGRLLGIVAKTFLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S P + + I ICED+W + HL Sbjct: 126 EKRWFASSQDLRPQRIHFAGHHISVTPDMQIFRTAQGAKFAIEICEDVWAPTPPSNHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K ++ Q + +Y + G+ ++++ G + F Sbjct: 186 AGAEIIFNLSASDELIGKHAYLKSLLAQQSARTISGYVYSSCGFGESTQDVVYGGNALIF 245 Query: 224 DGQQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMS------------------------ 258 + L + Q +TE ++ S+ S Sbjct: 246 ENGSLLEQSDRFRLDAQLIITEIDVERLRSERRTNSTFVNAQRPVAAGLAGITGQAGELG 305 Query: 259 ------------------DDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKV 295 S +IP E E +N V L + N KV Sbjct: 306 TRIDCLPPVNPMREFTLTRRFDSHPFIPKTENMKEACEEIFNIQVCGLAKRMVHTNSRKV 365 Query: 296 IIGLSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 IIG+SGG+DS L +AV K + + I +P T+ ++ +A + LG Sbjct: 366 IIGISGGLDSTLALLVAVRTFDKLGFDRKGIVGITMPGFGTTDRTYRNAMTLMENLGITI 425 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I V F + + EN Q+R R ILM LSN +++ T + SE Sbjct: 426 HEINIAASVLQHFKDIGH--DATVHDVTYENAQARERTQILMDLSNQLGGLVIGTGDLSE 483 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++G+ T GD + + KT L + + + I+E S Sbjct: 484 LALGWCTYNGDHMSMYAVNVSVPKTLTQYLVRYVAESSV----DETSRRTLNDIVETPIS 539 Query: 471 AELRP-------HQTDQESLPPYPILDDIIKRIVENEESFINN------------DQEYN 511 EL P Q ++ + PY + D + ++ Sbjct: 540 PELTPADDKGDIAQKTEDLVGPYELHDFFLYYVLRCGFRPSKIYWLAQNVFSGVYADGVI 599 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 +R + ++KR P G K+ + S D P D ++E Sbjct: 600 LHWLRIFYRRFFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDAMSTDWLNE 651 >gi|319902670|ref|YP_004162398.1| NH(3)-dependent NAD(+) synthetase [Bacteroides helcogenes P 36-108] gi|319417701|gb|ADV44812.1| NH(3)-dependent NAD(+) synthetase [Bacteroides helcogenes P 36-108] Length = 641 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 126/630 (20%), Positives = 245/630 (38%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+++ + A+ +G+ +++F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKYNVSEIEKEIIIADGKGVQIMVFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIQVLNNTRQMDIISILGMPVALNGVLLNAAVVIQRGKVLGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S N D GI ICED+W L QG Sbjct: 126 EKRWFTSACEVPDNSVRLCGQIVPMGRNLLFETADTTFGIEICEDLWATIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKHNYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 +A + F EQ ++E + + + +A Sbjct: 246 GMLIAASERFSFEEQVVISEIDVEHLRMERRVNTTFAACRANCASEFPVRISTEYVNSKD 305 Query: 263 --------STMYIP-----LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P + E ++ V L + ++G+SGG+DS L Sbjct: 306 LNLTRTLDPHPFVPSGAALNERCEEIFSIQVSGLAQRLVHTKAKSAVVGISGGLDSTLAL 365 Query: 310 AIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + K +++ + +P T+ ++ +A +LG + I + F Sbjct: 366 LVCARTFDKLGWFRKDIIGVTMPGFGTTGRTHANAVNLMNSLGVTVREISIKEACVQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + +V EN Q+R R +LM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DINHDIN--VHDVVYENSQARERTQVLMDIANQTWGMVVGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W +G+ + + I++ S EL P Q Sbjct: 484 MYGVNGSIPKTLVKHLVKWVAENGV----DESSRITLLDIVDTPISPELIPADDNGNIQQ 539 Query: 478 TDQESLPPYPILDDIIKRIVE-----------NEESFINN-DQEYNDETVRYVEHLLYGS 525 ++ + PY + D + + +F +++ + +R H + Sbjct: 540 ITEDLVGPYELHDFFLYYFLRCGFRPSKIFFLAARTFKGVYEEDVIKKWLRIFFHRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|218132866|ref|ZP_03461670.1| hypothetical protein BACPEC_00727 [Bacteroides pectinophilus ATCC 43243] gi|217991739|gb|EEC57743.1| hypothetical protein BACPEC_00727 [Bacteroides pectinophilus ATCC 43243] Length = 640 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 131/637 (20%), Positives = 246/637 (38%), Gaps = 87/637 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ + + V D N + ++A + +I+F E+ I+GY DL + + + Sbjct: 6 VRVEVVTPDIKVADCIFNTEQICSRIDKAYDAQVSVIVFPEMCITGYTCNDLFLQDTLLS 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ T+ T VVG P + + N ++ G I+ + K +PNY+EF+ Sbjct: 66 DAQKSLATITEYTKGKNMLTVVGLPFEYCNKLYNVAAVIKDGVILGLVPKKYIPNYNEFY 125 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R F G+ V F + +G+ ICED+W Sbjct: 126 ERRQFTEGFDKAVKVCVAGQQTYMGSRILFRCSDFEKLVVGVEICEDLWTPLPPSVSHAM 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +VTGQ + + Y + G+ +++F G Sbjct: 186 NGATLIVNPSASNETVGKEDYRRSLVTGQSARLVCAYAYASSGDGESTQDIVFGGHDIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 + L + F+ + + + +D+ S+ MS ++ Sbjct: 246 EN-GTLLAETSLFANNSVINDIDFDRLNSERRRMSTFTSATDNDEYTVVDFSLAGTEYTS 304 Query: 263 ------STMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 ++P E EA + + L+ + V+IG+SGG+DS L Sbjct: 305 LVRFIDPHPFVPENEATRNKRCEAILSIQAMGLKKRLAHIGCKNVVIGISGGLDSTLALL 364 Query: 311 IAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 +AV A G + + +P T+ ++ ++A K+LGC + + I + V F Sbjct: 365 VAVRAYGLLGLDMSGIHAVTMPGFGTTDRTYDNAVKMIKSLGCTFHEISIRESVTRHFED 424 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + + EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 425 IGHDIN--VHDVTYENGQARERTQILMDIANKVNGIVIGTGDMSELALGWATYNGDHMSM 482 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QT 478 + + KT V L + S L + +L+ S EL P Q Sbjct: 483 YGVNASVPKTLVRHLVRYYAEVLADSTLAK----VLYDVLDTPVSPELLPPDENGQIEQK 538 Query: 479 DQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV----RYVEHLLYGSE 526 ++ + PY + D + I+ + +Y++ET+ + + Sbjct: 539 TEDLVGPYELHDFFMYYILRFGIHPAKLYRIACAAFRPDYSEETILKWLKTFYRRFFAQH 598 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 +KR P G K+ + D P R + E Sbjct: 599 FKRSCLPDGPKVGTVAVSPRGDLRMPSDACARIWLKE 635 >gi|168207984|ref|ZP_02633989.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens E str. JGS1987] gi|168214779|ref|ZP_02640404.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens CPE str. F4969] gi|168217473|ref|ZP_02643098.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens NCTC 8239] gi|169342391|ref|ZP_02863456.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens C str. JGS1495] gi|169299511|gb|EDS81575.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens C str. JGS1495] gi|170660703|gb|EDT13386.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens E str. JGS1987] gi|170713785|gb|EDT25967.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens CPE str. F4969] gi|182380446|gb|EDT77925.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens NCTC 8239] Length = 635 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 137/640 (21%), Positives = 256/640 (40%), Gaps = 88/640 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+ A + D N+ + A + + +++F EL IS Y DL + Sbjct: 1 MDFIKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNEK 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ C+ AI L + + VG P + + N ++ G ++ + K +PNYS Sbjct: 61 LIENCNLAIKNLVEFSKGKDILMAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISGY------------------SNDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G+ ++ F+++++G ICED+W +L Sbjct: 121 EFYEKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V Q + IY + + +L+F G Sbjct: 181 ALMGANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIYSSAGVHESTTDLLFSGHMI 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMT--------EWHYDQQLSQWNYMSDDSASTMYIPLQ--- 270 + + + E + +T + + +S N +++ +IP Sbjct: 241 IAENGTIIKENNRFKRENDLLTGIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLEN 300 Query: 271 -------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 E N +L ++ N K +IG+SGG+DS Sbjct: 301 TEIKNFDREIDKHPFLPKSQYAMEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 361 TLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNAAL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T G Sbjct: 421 QHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L ++ +H I++ IL+ S EL P Sbjct: 479 DHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEA----LLDILDTPVSPELLPKDKEG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEES-----FINNDQ---EYNDETVRYV----EHL 521 Q ++ + PY + D + +++ S F+ + +Y++ET++ Sbjct: 535 KIAQKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKNDYDEETLKKWLDKFIRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHI 559 + ++KR P G K+ + S D P + D + Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDAVYNDFL 634 >gi|317473033|ref|ZP_07932333.1| NAD+ synthetase [Anaerostipes sp. 3_2_56FAA] gi|316899462|gb|EFV21476.1| NAD+ synthetase [Anaerostipes sp. 3_2_56FAA] Length = 632 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 126/626 (20%), Positives = 240/626 (38%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + +A + L++F+EL +SGY DL + ++ Sbjct: 6 IKVAAATPKVKVADPEYNTKEIIKIIRQAGDEEASLLVFSELAVSGYTCGDLFLQDPLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +K +T + VG P + + N V L G I+ V KI+LPNY EF+ Sbjct: 66 ESLKGLMEIKKETKGMDMVVTVGCPLVVEHKLYNCGVFLFDGRILGVVPKIHLPNYGEFY 125 Query: 125 EKRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 E R F G + ++ + + ICED+W H Sbjct: 126 EARHFAKGKREVKDILLDGEHVPFGANILLECTNIPELTIAMEICEDLWVPLPPSTHHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +V+ Q + + +Y N G+ ++++ G Sbjct: 186 AGATVICNPSASVETTTKEVYRSALVSNQSARLLSGYVYANAGEGESTTDVVYSGHHLIC 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN----YMSDDSASTMYIPL---------- 269 + + + K F + + +++ + +DS +P Sbjct: 246 EN-GTVLAEAKRFVNDIIYADMDVKRLVAERRKMTTFFEEDSEEYRRVPFILPVKVNQIT 304 Query: 270 -----------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + + + + L+ ++ N ++G+SGG+DS L + Sbjct: 305 RKFPKNPFVPSSREEREKRCDEILSIQSMGLKKRLEHTNCTHAVVGISGGLDSTLAVLVT 364 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A +EN+ + +P T+ ++ ++A + LG + I V F + Sbjct: 365 VRAFDMLDIPRENIICVTMPCFGTTDRTYQNAVSLIHELGATLKEVNIEKAVRQHFKDIE 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 +E+ + EN Q+R R ILM ++N M++ T + SE+++G+ T GD + Sbjct: 425 H--EEDVHDVTYENSQARERTQILMDIANKYNGMVIGTGDMSELALGWATYNGDHMSMYA 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + L + +L+ S EL P Q ++ Sbjct: 483 VNCSVPKTLVRYLVLYYAETVENKELSD----VLMDVLDTPVSPELLPPVDGVISQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYKR 529 + PY + D + ++ + + +Y+DET++ + ++KR Sbjct: 539 LVGPYELHDFFLYYMLRFGFPKAKLYRMAKLTFAGDYDDETIQKWLDKFYWRFFSQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 599 SCLPDGPKVGSVAVSPRGDLRMPSDA 624 >gi|153814951|ref|ZP_01967619.1| hypothetical protein RUMTOR_01166 [Ruminococcus torques ATCC 27756] gi|317501609|ref|ZP_07959802.1| glutamine-dependent NAD+ synthetase [Lachnospiraceae bacterium 8_1_57FAA] gi|331088525|ref|ZP_08337439.1| hypothetical protein HMPREF1025_01022 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847519|gb|EDK24437.1| hypothetical protein RUMTOR_01166 [Ruminococcus torques ATCC 27756] gi|316896986|gb|EFV19064.1| glutamine-dependent NAD+ synthetase [Lachnospiraceae bacterium 8_1_57FAA] gi|330407865|gb|EGG87356.1| hypothetical protein HMPREF1025_01022 [Lachnospiraceae bacterium 3_1_46FAA] Length = 639 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 126/628 (20%), Positives = 235/628 (37%), Gaps = 86/628 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N + RA ++A +G ++ F EL ++GY DL + + Sbjct: 6 VKVAAATPDIRVADVEYNTEQICRAIDQAYEKGAKIVAFPELCVTGYTCGDLFTQNVLLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + T VG P + + N+ ++ G +I K LPNY EF+ Sbjct: 66 AAYGAVKKIAGHTKGKNILAFVGMPLTEGGKLYNTAAAVNDGKVIGFTTKTFLPNYGEFY 125 Query: 125 EKRTFISG-YSNDPIVFRDIR------------------LGILICEDIWKNSNICKHLKK 165 E R F G S I F + +G ICED+W Sbjct: 126 EMRQFTPGPDSVRWIQFDGEKVPFGPKILFQDDETADLIVGAEICEDVWSPVPPSIEEAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R ++ GQ + + +Y N G+ +L+F G + Sbjct: 186 AGATIIVNCSASDETVGKGSYRTRLIAGQSARLIAGYVYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 + + Q + + + +E ++ + + + S Sbjct: 246 E-DGTILRQSERYKNEIIYSEIDLEKIVGERRKNTTFSPEKLNCGCPVVVPFHVGICDTV 304 Query: 263 ------STMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 ++P E + + L+ + N ++G+SGG+DS L Sbjct: 305 LTRNFSQHPFVPSDEAARAHICDEILTIQAMGLKKRLSHTNAKSAVVGISGGLDSTLALL 364 Query: 311 I---AVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + A D LG++ + + +P T+ ++ +A + G +PI + VN F Sbjct: 365 VTAKAFDMLGRDKKEIIAVTMPCFGTTDRTYNNACEMTRQTGATLIEVPIGEAVNVHFRD 424 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + + EN Q+R R +LM ++N M++ T + SE+++G+ T GD Sbjct: 425 IGH--DPDVHDVTYENAQARERTQVLMDIANREAGMVIGTGDMSELALGWATYNGDHMSM 482 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L L + +L+ S EL P Q Sbjct: 483 YGVNASVPKTLVRHLVQHAADTTENESLRQ----VLYDVLDTPVSPELLPPKDGDIAQKT 538 Query: 480 QESLPPYPILDDIIKRIVENEESFINN------------DQEYNDETVRYVEHLLYGSEY 527 ++ + PY + D + ++ S ++E + ++ + ++ Sbjct: 539 EDLVGPYELHDFYLYYMLRFGFSPEKIFTLAVNAFAGVYEKETILKWLKIFYRRFFSQQF 598 Query: 528 KRRQAPVGTKITAKSFGR--DRLYPISN 553 KR P G K+ + + D P Sbjct: 599 KRSCLPDGPKVGSVALSPRGDWRMPSDA 626 >gi|167745420|ref|ZP_02417547.1| hypothetical protein ANACAC_00111 [Anaerostipes caccae DSM 14662] gi|167655141|gb|EDR99270.1| hypothetical protein ANACAC_00111 [Anaerostipes caccae DSM 14662] Length = 632 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 126/626 (20%), Positives = 240/626 (38%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + +A + L++F+EL +SGY DL + ++ Sbjct: 6 IKVAAATPKVKVADPEYNTKEIIKIIRQAGDEEASLLVFSELAVSGYTCGDLFLQDPLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + +K +T + VG P + + N V L G I+ V KI+LPNY EF+ Sbjct: 66 ESLKGLMEIKKETKGMDMVVTVGCPLVVEHKLYNCGVFLFDGRILGVVPKIHLPNYGEFY 125 Query: 125 EKRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 E R F G + ++ + + ICED+W H Sbjct: 126 EARHFAKGKREVKDILLDGEYVPFGANILLECTNIPELTIAMEICEDLWVPLPPSTHHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +V+ Q + + +Y N G+ ++++ G Sbjct: 186 AGATVICNPSASVETTTKEVYRSALVSNQSARLLSGYVYANAGEGESTTDVVYSGHHLIC 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN----YMSDDSASTMYIPL---------- 269 + + + K F + + +++ + +DS +P Sbjct: 246 EN-GTVLAEAKRFVNDIIYADMDVKRLVAERRKMTTFFEEDSEEYRSVPFILPVKVNQIT 304 Query: 270 -----------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + + + + L+ ++ N ++G+SGG+DS L + Sbjct: 305 RKFPKNPFVPSSREEREKRCDEILSIQSMGLKKRLEHTNCTHAVVGISGGLDSTLAVLVT 364 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A +EN+ + +P T+ ++ ++A + LG + I V F + Sbjct: 365 VRAFDMLDIPRENIICVTMPCFGTTDRTYQNAVSLIHELGATLKEVNIEKAVRQHFKDIE 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 +E+ + EN Q+R R ILM ++N M++ T + SE+++G+ T GD + Sbjct: 425 H--EEDVHDVTYENSQARERTQILMDIANKYNGMVIGTGDMSELALGWATYNGDHMSMYA 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + L + +L+ S EL P Q ++ Sbjct: 483 VNCSVPKTLVRYLVLYYAETVENKELSD----VLMDVLDTPVSPELLPPVDGVISQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYKR 529 + PY + D + ++ + + +Y+DET++ + ++KR Sbjct: 539 LVGPYELHDFFLYYMLRFGFPKAKLYRMAKLTFAGDYDDETIQKWLDKFYWRFFSQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 599 SCLPDGPKVGSVAVSPRGDLRMPSDA 624 >gi|239626146|ref|ZP_04669177.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520376|gb|EEQ60242.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 659 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 126/656 (19%), Positives = 241/656 (36%), Gaps = 106/656 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A V D N + + +G+ L++F EL ++ Y DL F+ S + Sbjct: 6 IRAAAVTPKVKVADPEYNAQQIIELINQGASRGVKLMVFPELCLTAYTCSDLFFQTSLLA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + D +G P + + N+ + G ++ + K NLPNYSEF+ Sbjct: 66 KAREQLSRIIKASRDKDILAFIGMPWERDGKLYNAAAAIHRGKLLGIIPKKNLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R F G V R++ + ICED+W Sbjct: 126 EARHFCPGNERPVFVSWEGGQVPMGMNLLFRCSNLRNLTIAAEICEDVWVPCPPSIRHSL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K RHE++ Q + + +Y N G+ +L+F G + Sbjct: 186 AGATVIVNCSASDETTGKDMYRHELICSQSARLVCGYVYANAGEGESTQDLVFGGQNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST------------------- 264 + L + + F+ ++ + ++ S+ MS A Sbjct: 246 ENGTCL-VESRRFTNESICADLDMERLDSERRRMSTFPAPEEARREGGYMIVDFELSLDS 304 Query: 265 ----------------------------MYIPLQE------EEADYNACVLSLRDYVQKN 290 ++P E E + + L+ ++ Sbjct: 305 AVNTNAQTAQADGLKESARDVLRFIDPAPFVPGDERQRSRRCEEILSIQAMGLKKRLEHT 364 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKA 345 ++GLSGG+DS L + V A + N+ I +P T+ ++ +A A A Sbjct: 365 GSQHAVVGLSGGLDSTLALLVTVRAFDALKLPRTNIHCITMPCFGTTDRTYNNACAMAAK 424 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 +G + + I V+ F+ + Q + + + EN Q+R R +LM ++N +++ T Sbjct: 425 VGAELREINIRQAVSQHFTDIGQDM--DNHDVAYENSQARERTQVLMDIANQVGGLVIGT 482 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 + SE+++G+ T GD + + KT V L + L + +L Sbjct: 483 GDMSELALGWATYNGDHMSMYGVNASVPKTLVRHLVRYYADTCREKELAD----VLLDVL 538 Query: 466 EKSPSAELRP------HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYN 511 + S EL P Q ++ + PY + D + I+ + +Y+ Sbjct: 539 DTPVSPELLPPEDGKISQKTEDLVGPYELHDFYLYYILRYGYAPSKIYRMAVQAFRGQYD 598 Query: 512 D----ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 + + ++ + ++KR P G K+ + + D P R + E Sbjct: 599 NGVILKWMKVFYRRFFSQQFKRSCLPDGPKVGSVAVSPRGDLRMPSDACSRLWLEE 654 >gi|303235630|ref|ZP_07322237.1| NAD+ synthase [Prevotella disiens FB035-09AN] gi|302484077|gb|EFL47065.1| NAD+ synthase [Prevotella disiens FB035-09AN] Length = 651 Score = 473 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 132/640 (20%), Positives = 240/640 (37%), Gaps = 97/640 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + D N+ + A QG+++I+F E I+GY +DL ++ + Sbjct: 6 IKVATAIPEVRIADTKFNLEAIEKQIVMAEGQGVEIIVFPEFCITGYTCQDLFRQQQLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L T +VG P +LN V++ G I+ + K LPNY+EF+ Sbjct: 66 DAERAMLRLLDFTRQLDIIAIVGTPVSVGSILLNCAVVVQHGKILGIVPKTYLPNYAEFY 125 Query: 125 EKRTFISGYSNDPIVFR-------------------DIRLGILICEDIWKNSNICKHLKK 165 EKR F S + P ++ GI ICEDIW L Sbjct: 126 EKRWFASAFDMSPTKVHYAGQLLPITPEPQIYRTADGVKFGIEICEDIWSPIPPSSVLTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K ++ Q + +Y + G+ +++F G +F + Sbjct: 186 DGAEIIFNLSASTEQIGKHSYLEALLAQQSARTLSAYVYSSCGFGESTQDVVFGGNAFVY 245 Query: 224 DGQQQLAFQMKHFSE-QNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE----------- 271 + QLA + E Q + + ++ S+ + + + + Sbjct: 246 ENGVQLASAKRFQMESQVVICDIDIEKLRSERRLNTTFVNAQHNLFVLPVGSGTYEKKYI 305 Query: 272 --------------------------------EEADYNACVLSLRDYVQKNNFHKVIIGL 299 E +N V L + V++G+ Sbjct: 306 DCMPKENAEREFVLNRNIAPQPFLQGETIDAACEEAFNIQVTGLAKRLLHIKCKTVVLGI 365 Query: 300 SGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + ++A + +++ + +P TS ++ +A + LG + Sbjct: 366 SGGLDSTLALLVCIEAFDRLKFDRKDILAVTMPGFGTSDRTHNNALLLMQELGVTMKEIS 425 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 I V F + + EN Q+R R ILM L+N +++ T + SE+++G Sbjct: 426 IVPSVTQHFKDIEHDIN--VQDATYENAQARERTQILMDLANEYNGLVIGTGDLSELALG 483 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT V QL + + + I++ S EL Sbjct: 484 WCTYNGDHMSMYAVNGSVPKTLVKQLVGYVANQTDNVKVAES----LRDIVDTPISPELV 539 Query: 475 P-------HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE 519 P Q ++ + PY + D + + + + + +Y +E ++ Sbjct: 540 PTNESGEVQQKTEDIVGPYELHDFFLYYFLRHGFQPSKIYYLAGQAFEGKYTNEEIKKWL 599 Query: 520 ----HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + +++KR P G K+ S D P Sbjct: 600 YTFVRRFFNNQFKRSCLPEGPKVGMVSLSPRGDWRMPSDA 639 >gi|300727137|ref|ZP_07060556.1| glutamine-dependent NAD+ ligase [Prevotella bryantii B14] gi|299775681|gb|EFI72272.1| glutamine-dependent NAD+ ligase [Prevotella bryantii B14] Length = 666 Score = 473 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 140/655 (21%), Positives = 250/655 (38%), Gaps = 112/655 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A N VGDI N + +A +G+++++F EL I+GY +DL ++ ++ Sbjct: 6 IKVASAVPNVKVGDIEYNTHEIESIIAQAEGKGVEIVVFPELSITGYSCQDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +AI L T +VG P +LN V++ G I+++ K LPNYSEF+ Sbjct: 66 ASENAILMLLDFTRKLDIIAIVGAPVAANGLLLNCGVVIQKGQILSIVPKTYLPNYSEFY 125 Query: 125 EKRTFISGY----------------SNDPIVFR---DIRLGILICEDIWKNSNICKHLKK 165 EKR F S + D +FR ++ GI +CED+W + L Sbjct: 126 EKRWFASAQDLKNMSIRYAGHTLQLTPDVQLFRTADGVQFGIEVCEDVWAPAPPSNKLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K ++ Q + IY + G+ ++++ G + + Sbjct: 186 AGADLIFNLSASDELIGKHAYLKSLLAQQSARTMTGYIYSSCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE----------- 271 + Q L + S Q +++ ++ S+ S + I E Sbjct: 246 ENGQLLEEGDRFSVSSQMVVSQIDVEKLRSERRTNSTYVNAQRNIKYSELNGQFAIRTID 305 Query: 272 -------------------------------EEADYNACVLSLRDYVQKNNFHKVIIGLS 300 E +N + L + + V+IG+S Sbjct: 306 AKSSDIIHDFKLERKVNAHPFIPTSSDMNASCEEIFNIQTMGLAKRLVHTHCKTVVIGIS 365 Query: 301 GGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L + ++ + + +P T+ ++ +A + LG + I Sbjct: 366 GGLDSTLALLVCCRTFDRLGLDRKGIVGVTMPGFGTTDRTFNNAISLMNGLGITIREISI 425 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 V F + + I EN Q+R R ILM LSN M++ T + SE+++G+ Sbjct: 426 AKSVTQHFEDIGHDIS--VHDITYENGQARERTQILMDLSNQLGGMVIGTGDLSELALGW 483 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD + + KT + L + + ++ I++ S EL P Sbjct: 484 ATYNGDHMSMYGVNCSIPKTLIKYLVRYVAMTSV----DETSKETLLDIIDTPISPELVP 539 Query: 476 H-------QTDQESLPPYPILDDIIKRIVE------------------------NEESFI 504 Q ++ + PY + D + + E Sbjct: 540 ADEDGNIKQKTEDLVGPYELHDFFLYYFLRFGFRPKKIYMLARHAFEQPTSDTVKETKGA 599 Query: 505 NNDQEYNDETVRYVE----HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + +Y+DET++ + ++KR P G K+ + S D P Sbjct: 600 DLGGKYDDETIKKWLKVFVRRFFNQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 654 >gi|325860304|ref|ZP_08173426.1| NAD+ synthase [Prevotella denticola CRIS 18C-A] gi|325482183|gb|EGC85194.1| NAD+ synthase [Prevotella denticola CRIS 18C-A] Length = 656 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 140/652 (21%), Positives = 239/652 (36%), Gaps = 101/652 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+A+ + A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPAVKVADTKFNLAETEKQIAIAEGKGVEVIVFPELSLTGYSCQDLFHQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L T +VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 DAEQAVLSLLDFTRQLDITAIVGAPVAVGPLLLNCALVIQQGRLLGIVAKTFLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S P + + I ICED+W + HL Sbjct: 126 EKRWFASSQDLRPQRIHFAGHHISVTPDMQIFRTAQGAKFAIEICEDVWAPTPPSNHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K ++ Q + +Y + G+ ++++ G + F Sbjct: 186 AGAEIIFNLSASDELIGKHAYLKSLLAQQSARTISGYVYSSCGFGESTQDVVYGGNALIF 245 Query: 224 DGQQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMS------------------------ 258 + L + Q +TE ++ S+ S Sbjct: 246 ENGSLLEQSDRFRLDAQLVITEIDVERLRSERRTNSTFVNAQRPVAAGLAGITGQAGELG 305 Query: 259 ------------------DDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKV 295 S +IP E E +N V L + N KV Sbjct: 306 TRIDCLPPVNPMREFTLTRRFDSHPFIPKTENMKEACEEIFNIQVCGLAKRMVHTNSRKV 365 Query: 296 IIGLSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 IIG+SGG+DS L +AV K + + + +P T+ ++ +A + LG Sbjct: 366 IIGISGGLDSTLALLVAVRTFDKLGFDRKGIVGVTMPGFGTTDRTYRNAMTLMENLGITI 425 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I V F + + EN Q+R R ILM LSN +++ T + SE Sbjct: 426 HEINIAASVLQHFKDIGH--DATVHDVTYENAQARERTQILMDLSNQLGGLVIGTGDLSE 483 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++G+ T GD + + KT L + + + I+E S Sbjct: 484 LALGWCTYNGDHMSMYALNVSVPKTLTQYLVRYVAESSVDDT----SRRTLNDIVETPIS 539 Query: 471 AELRP-------HQTDQESLPPYPILDDIIKRIVENEESFINN------------DQEYN 511 EL P Q ++ + PY + D + ++ Sbjct: 540 PELTPADDKGDIAQKTEDLVGPYELHDFFLYYVLRCGFRPSKIYWLAQNVFSGVYADGVI 599 Query: 512 DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 +R + ++KR P G K+ + S D P D ++E Sbjct: 600 LHWLRIFYRRFFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDAMSTDWLNE 651 >gi|268610972|ref|ZP_06144699.1| NAD+ synthetase [Ruminococcus flavefaciens FD-1] Length = 637 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 136/626 (21%), Positives = 238/626 (38%), Gaps = 85/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA A + V D N + EA+ + + +I F EL ++GY DL + + + Sbjct: 6 IKIACATPDIKVADCQYNADRIIELITEAHSKRVKIICFPELSVTGYTCGDLFLQDALLS 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + S + + +T ++G P + N VI + G ++ K N+PNYSEF+ Sbjct: 66 SAKSELVRIVKETEKLDIVSIIGMPLTVCGKLYNCAVIANKGKVLGAVAKKNIPNYSEFY 125 Query: 125 EKRTFISGYSN-----------------DPIVFRDIR---LGILICEDIWKNSNICKHLK 164 E R F + +++ GI ICED+W S + L Sbjct: 126 EMRHFTAANDGLCADIQLNDEYTIHIEETVFTCKELPELAFGIEICEDMWVGSPPSERLA 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA +F+L+AS K R ++ + + + Y + G+ ++IF G + Sbjct: 186 ASGAVIIFNLSASDEVIGKADYRRTLIKSRSASLTCAYAYADSGIGESTQDMIFAGHNII 245 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ------------ 270 + L + K FS + + + + M+ SAS Sbjct: 246 AEN-GSLLAESKAFSSGLSIADIDIKKLYYERRRMNTFSASPSIYTSYFSLNVTNTVLDR 304 Query: 271 -----------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 E + L ++ ++GLSGG+DS L +AV Sbjct: 305 VFSQTPFVPSDKMQLDSRCEEILTMQAVGLMTRLRHIGCKNAVLGLSGGLDSTLALIVAV 364 Query: 314 DALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A ++ + TI +P T+ ++ +A AKA G + I V FS + Q Sbjct: 365 HAFDLLELDRKGIHTITMPCFGTTDRTYNNACLLAKAYGSTLIEINICSSVMQHFSDIGQ 424 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + + EN Q+R R +LM +N +++ T + SE+++G+ T GD + Sbjct: 425 --SPDIHDVTYENSQARERTQVLMDKANQFGGIVIGTGDLSELALGWATYNGDHMSMYAV 482 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQE 481 + KT L W ++ G L + I IL+ S EL P Q ++ Sbjct: 483 NSSIPKT----LVRWLVNYEAEISEGELKK-ILFDILDTPVSPELLPPKKNGTISQKTED 537 Query: 482 SLPPYPILDDIIKRIVENE-----------ESFINN-DQEYNDETVRYVEHLLYGSEYKR 529 + PY + D + I+ SF + +E + ++ + ++KR Sbjct: 538 IVGPYELHDFFMYYILRYGFSPSKVFRIACLSFADTYPKEVIMKWLKIFYRRFFNQQFKR 597 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + D P Sbjct: 598 SCLPDGPKVGTVTLSPRGDWRMPSDA 623 >gi|291542608|emb|CBL15718.1| NAD+ synthetase [Ruminococcus bromii L2-63] Length = 636 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 135/639 (21%), Positives = 260/639 (40%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N +EA++ G L++F EL ++GY DL +++ + Sbjct: 6 IKVASATPKIRVADCKTNTINIIEQIKEAHKNGASLVVFPELCVTGYTCSDLFYQRVLLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +++ + +T D + G P + + N ++ G+I+ + K+N+PNYSEF+ Sbjct: 66 AAEKSVEKILKETADLDIISIAGVPVAIESALYNCAAVIYKGDILGIVPKVNIPNYSEFY 125 Query: 125 EKRTFISGYS--------------NDPIVF-----RDIRLGILICEDIWKNSNICKHLKK 165 E R + SG + +D +VF RD G+ +CED+W ++ K Sbjct: 126 EVRHYTSGKNLYDEISYAGVETIISDNLVFCCDKMRDFSFGVEVCEDLWVAASPSVEHAK 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + + S K + R ++V Q + IY + G+ +++F G + Sbjct: 186 HGATIICNPSTSDDVIGKAQYRRDLVKMQSGKLCCAYIYSDSGFGESTTDMVFSGQNIIS 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD-------------------------QQLSQWNYMS 258 + L + K F+ + + ++ Sbjct: 246 ENASLL-AESKRFTTGIIYADIDVQKLSAERRKTNTFTKSDDNNFTSVYFDMPLKHTELT 304 Query: 259 DDSASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + + T +IP E L + ++GLSGG+DS L + Sbjct: 305 REFSQTPFIPSNKSDLDARCEEIITMQATGLATRLAHTGIQNAVLGLSGGLDSTLALIVC 364 Query: 313 VDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A ++N+ T+ +P T+ ++ +A A+A G ++ + I V F+ ++ Sbjct: 365 VHAFDMLGIDRKNIHTVTMPCFGTTKRTKSNAQLLAEAYGVSFEDINITKAVRQHFADIN 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 E + I EN Q+R R ILM LSN +++ T + SE+++G+ T GD + Sbjct: 425 H--DESVTNITYENSQARERTQILMDLSNKYNGLVIGTGDLSELALGWATYNGDHMSMYA 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQ 480 + KT V L ++ H + + + +L+ S EL P Q + Sbjct: 483 VNVSIPKTLVRYLTAYEAQHSEG-----VLKTVLLDVLDTPVSPELLPPDKNGEIAQKTE 537 Query: 481 ESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYGSEYK 528 + + PY + D + +V + + +Y++ T++ + ++K Sbjct: 538 DVVGPYELHDFFLYYLVRFGFEPNKIYYLAKKSFAGKYDNATIKKWLTTFVRRFFTQQFK 597 Query: 529 RRQAPVGTKITAKSFG--RDRLYPI---SNKFRDHISEE 562 R P G K+ + + D P N + +++ E+ Sbjct: 598 RSCLPDGPKVGSVTLSPRSDWRMPSDACVNLWLENLEED 636 >gi|121606606|ref|YP_983935.1| NAD+ synthetase [Polaromonas naphthalenivorans CJ2] gi|120595575|gb|ABM39014.1| NH(3)-dependent NAD(+) synthetase [Polaromonas naphthalenivorans CJ2] Length = 566 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 199/576 (34%), Positives = 309/576 (53%), Gaps = 35/576 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LKI +AQLN +GD+AGN+ K A A D+++F+E+ ++ Y P DL+ + F+ Sbjct: 2 LKITVAQLNFTIGDLAGNVVKMVAAARAAWADQSDIVVFSEMALTAYYPGDLLDEDGFMA 61 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQD---QEGVLNSVVILDAGNIIAVRDKINLPNY 120 A + + G VVG P + + ++N++ ++ G ++ K LP Y Sbjct: 62 RVDVAFADILLASRQTPGLHWVVGLPARRAAPGKKLINALRVIQGGEVLLEYAKQLLPTY 121 Query: 121 SEFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G + R ++ G LICED W + N + L+ + + S Sbjct: 122 NIFDERRHFEPGQDVAKVLRIRGVQAGFLICEDGWNDHGQDYAVNPFERLRGAAPDLVIS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + ++RH++ + LPI+YVNQVGG D+L++DGASF + Q + ++ Sbjct: 182 INASPSNTGQREQRHQVFSAASRRNQLPIVYVNQVGGHDQLVYDGASFAVEPQAGVVYEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC-VLSLRDYVQKNNF 292 F E+ + ++ ++ D + + + A Y VL LRDY ++ F Sbjct: 242 GRFVEEVSTLRFD----NGRFLTLAGDRPAKVPVEGLPLMAFYRRQIVLGLRDYARRCGF 297 Query: 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 + +IG SGGIDSAL A+A +ALG NV I +P +++S S++D+A + LG + Sbjct: 298 SRAVIGSSGGIDSALTLALAAEALGPANVVAITMPSQFSSAGSVDDSAILCRNLGVELLR 357 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 PI+ LV F + GI EN+Q+R RG +LM SN +LLTT NKSE+S Sbjct: 358 HPINGLVAEFSGGFKAAFGQPLQGIALENLQARSRGTVLMEYSNSFGHLLLTTGNKSELS 417 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 VGY TLYGD +GG + DLYKT+VF L+ N E+IP +I++K+PSAE Sbjct: 418 VGYCTLYGDTNGGLGLIGDLYKTEVFALSRHLNETAG-------KEIIPQAIIDKAPSAE 470 Query: 473 LRPHQTDQESLPPYPILDDIIKRIVEN--------EESFINNDQ----EYNDETVRYVEH 520 L P Q D +SLPPYP+LD+++K ++E E++ D N + + Sbjct: 471 LAPGQKDVDSLPPYPVLDEVLKLLIEGPLLAPGEYEKAACFVDALRKEAENRAMIERIRG 530 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ +EYKRRQAP ++ A++FG R PI+ KF Sbjct: 531 MIARNEYKRRQAPPIIRLRARAFGTGRQMPIAAKFE 566 >gi|168210750|ref|ZP_02636375.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens B str. ATCC 3626] gi|170711208|gb|EDT23390.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens B str. ATCC 3626] Length = 635 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 138/640 (21%), Positives = 256/640 (40%), Gaps = 88/640 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+ A + D N+ + A + + +++F EL IS Y DL + Sbjct: 1 MDFIKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNEK 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ C+ AI L + + VG P + + N ++ G ++ + K +PNYS Sbjct: 61 LIENCNLAIKNLVEFSKGKDILMAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISGY------------------SNDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G+ ++ F+++++G ICED+W +L Sbjct: 121 EFYEKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V Q + IY + + +L+F G Sbjct: 181 ALMGANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIYSSAGVHESTTDLLFSGHMI 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMT--------EWHYDQQLSQWNYMSDDSASTMYIPLQ--- 270 + + + E + +T + + +S N +++ +IP Sbjct: 241 IAENGTIIKENNRFKRENDLLTGIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLEN 300 Query: 271 -------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 E N +L ++ N K +IG+SGG+DS Sbjct: 301 TEIKNFDREIDKHPFLPKSQYAMEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 361 TLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNAAL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T G Sbjct: 421 QHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L ++ +H I++ IL+ S EL P Sbjct: 479 DHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEA----LLDILDTPVSPELLPKDKEG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEES-----FINNDQ---EYNDETVRYV----EHL 521 Q ++ + PY + D + +++ S F+ + +YN+ET++ Sbjct: 535 KIAQKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKNDYNEETLKKWLDKFIRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHI 559 + ++KR P G K+ + S D P + D + Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDAVYNDFL 634 >gi|182626233|ref|ZP_02953991.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens D str. JGS1721] gi|177908497|gb|EDT71030.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens D str. JGS1721] Length = 635 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 137/640 (21%), Positives = 256/640 (40%), Gaps = 88/640 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+ A + D N+ + A + + +++F EL IS Y DL + Sbjct: 1 MDFIKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNEK 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ C+ AI L + + VG P + + N ++ G ++ + K +PNYS Sbjct: 61 LIENCNLAIKNLVEFSKGKDILMAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISGY------------------SNDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G+ ++ F+++++G ICED+W +L Sbjct: 121 EFYEKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V Q + IY + + +L+F G Sbjct: 181 ALIGANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIYSSAGVHESTTDLLFSGHMI 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMT--------EWHYDQQLSQWNYMSDDSASTMYIPLQ--- 270 + + + E + +T + + +S N +++ +IP Sbjct: 241 IAENGTIIKENNRFKRENDLLTGIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLEN 300 Query: 271 -------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 E N +L ++ N K +IG+SGG+DS Sbjct: 301 TEIKNFDREIDKHPFLPKSQYAMEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 361 TLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNAAL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T G Sbjct: 421 QHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L ++ +H I++ IL+ S EL P Sbjct: 479 DHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEA----LLDILDTPVSPELLPKDKEG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEES-----FINNDQ---EYNDETVRYV----EHL 521 Q ++ + PY + D + +++ S F+ + +Y++ET++ Sbjct: 535 KIAQKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKNDYDEETLKKWLDKFIRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHI 559 + ++KR P G K+ + S D P + D + Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDAVYNDFL 634 >gi|110799343|ref|YP_695760.1| NAD synthetase [Clostridium perfringens ATCC 13124] gi|110673990|gb|ABG82977.1| glutamine-dependent NAD(+) synthetase [Clostridium perfringens ATCC 13124] Length = 635 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 139/640 (21%), Positives = 256/640 (40%), Gaps = 88/640 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+ A + D N+ + A + + +++F EL IS Y DL K Sbjct: 1 MDFIKVGAASPKLKISDTKYNLKEIETMILNAIEEEVKVLVFPELSISAYSCGDLFTNKK 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ C+ AI L + + VG P + + N ++ G ++ + K +PNYS Sbjct: 61 LIENCNLAIKNLVEFSKGKDILMAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISGY------------------SNDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G+ ++ F+++++G ICED+W +L Sbjct: 121 EFYEKRWFTEGFNIKGLNVDLDFQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V Q + IY + + +L+F G Sbjct: 181 ALMGANLICNLSASNELVSKSSYRKSLVQNQSARTMCSYIYSSAGVHESTTDLLFSGHMI 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMT--------EWHYDQQLSQWNYMSDDSASTMYIPLQ--- 270 + + + E + +T + + +S N +++ +IP Sbjct: 241 IAENGTIIKENNRFKRENDLLTGIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLEN 300 Query: 271 -------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 E N +L ++ N K +IG+SGG+DS Sbjct: 301 TEIKNFDREIDKHPFLPKSQYAMEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V +EN+ TI +P T+ ++ +A K L C + + I + Sbjct: 361 TLALLVVVKTFDMLNIPRENIITITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNAAL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T G Sbjct: 421 QHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L ++ +H I++ IL+ S EL P Sbjct: 479 DHMSMYSVNCSIPKTLVRFLVNYFANHEISNDAKEA----LLDILDTPVSPELLPKDKEG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEES-----FINNDQ---EYNDETVRYV----EHL 521 Q ++ + PY + D + +++ S F+ + +YN+ET++ Sbjct: 535 KIAQKTEDIVGPYELHDFFLYHFIKHGSSPERILFLAKEAFKNDYNEETLKKWLDKFIRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHI 559 + ++KR P G K+ + S D P + D + Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDAVYNDFL 634 >gi|154506146|ref|ZP_02042884.1| hypothetical protein RUMGNA_03688 [Ruminococcus gnavus ATCC 29149] gi|153793645|gb|EDN76065.1| hypothetical protein RUMGNA_03688 [Ruminococcus gnavus ATCC 29149] Length = 638 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 135/631 (21%), Positives = 242/631 (38%), Gaps = 86/631 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K+ +K+A A + V D+ N + A EEA +++F EL ++GY DL + Sbjct: 1 MKQGFIKVAAATPDIRVADVPFNTKQICSAIEEAQNNQAKIVVFPELCVTGYTCGDLFTQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 +QA A+ + T + + VG P + N L G I+ + K LPN Sbjct: 61 DVLLQAAKQALLEITEFTREKDMLVFVGVPLVVDAKLYNVAAALCRGEILGLTTKTFLPN 120 Query: 120 YSEFHEKRTFISGYS-NDPIVFRDIRLGI------------------LICEDIWKNSNIC 160 Y EF+E R F +G I+F ++ ICED+W Sbjct: 121 YGEFYEMRQFTAGPDVPGEILFNGKKVPFGPGLLFQASSMEELIVSAEICEDVWSPIPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 +GA + + +AS K R +++ GQ + + IY N G+ +L+F G Sbjct: 181 IRAAMEGATVIVNCSASDETIGKDSYRRDLIKGQSARLIAGYIYANAGEGESTTDLVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM--------------------- 257 + + + ++K F Q TE + + + Sbjct: 241 HNLIAEN-GSILAELKRFENQIIYTELDIKRIVGERRKNTTFTMEKEKVLPRISFPLDVC 299 Query: 258 ----SDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + + ++P E E + L+ + + + ++G+SGG+DS L Sbjct: 300 ETKLTREFPKKPFVPQDEKERALRCEEILTIQAMGLKKRLLHTHANTAVVGISGGLDSTL 359 Query: 308 CA---AIAVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 A A D +GK+ + I +P T+ ++ +A A+ LG + I D V+ Sbjct: 360 ALIVTAKAFDMIGKDKKEILAITMPCFGTTDRTYRNACKMAEQLGATLREVKIADSVSLH 419 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + + + EN Q+R R +LM ++N + M++ T + SE+++G+ T GD Sbjct: 420 FQDIGH--DPKDHSVTYENAQARERTQVLMDIANATNGMVIGTGDMSELALGWATYNGDH 477 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------H 476 + + KT V L + P + + +L+ S EL P Sbjct: 478 MSMYGVNASVPKTLVRHLVKYAADVTA----DPKLQEVLYDVLDTPVSPELLPPKDGDIA 533 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + ++ + + Y ET+ + Sbjct: 534 QKTEDLVGPYELHDFYLYFMLRFGYEPGKIYRLAMQTFEGVYEKETILKWLTTFCRRFFN 593 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G KI + D P Sbjct: 594 QQFKRSCLPDGPKIGTVALSPRGDWRMPSDA 624 >gi|153854639|ref|ZP_01995889.1| hypothetical protein DORLON_01884 [Dorea longicatena DSM 13814] gi|149752743|gb|EDM62674.1| hypothetical protein DORLON_01884 [Dorea longicatena DSM 13814] Length = 651 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 133/626 (21%), Positives = 236/626 (37%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A A + V D+A N + +E G +I+F EL ++GY DL + ++ Sbjct: 6 VKAAAATPDIRVADVAYNTENICKMIDETVANGAKVIVFPELCVTGYTCSDLFMQDILLK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + T + A I +G P + N L+ GNI+ + K LPNY EF+ Sbjct: 66 EAKEALFKIADYTKEKDALIFIGVPLAVDGELYNVAAALNRGNILGLTTKTFLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIVFRDIR-------------------LGILICEDIWKNSNICKHLKK 165 E R F G + D + + ICED+W + Sbjct: 126 EMRQFRPGPDMARWITLDGKKIPFGPQLLFVAEQMEELVVSAEICEDVWSPIPPSTLAAR 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R ++ GQ + + IY N G+ +L+F G + Sbjct: 186 EGATVIVNCSASDETIGKAAYRESLIEGQSARLICGYIYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L FS + TE + LS+ + Sbjct: 246 ENGTTL-ASSNRFSNEVIYTEIDVKRLLSERRKNTTFQTEKERTLIRIPFEIHVEETELT 304 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI- 311 AS ++P E + L+ + + ++G+SGG+DS L + Sbjct: 305 RRFASRPFVPSVMAERNLRCEEILTIQAMGLKKRLAHAHAKSAVVGISGGLDSTLALLVS 364 Query: 312 --AVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A DALG + + + +P T+ ++ ++A + LG +P+ V F + Sbjct: 365 AKAFDALGMDRSGIVAVTMPCFGTTDRTYQNACKMSVKLGATLREIPVGAAVEQHFKDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 E + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 425 H--DPEDHSVTYENSQARERTQVLMDVANQTGGIVIGTGDMSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + L + +L+ S EL P Q ++ Sbjct: 483 VNASVPKTLVRHLVHYYADTCEDQELKE----VLYDVLDTPVSPELLPPKDGEIAQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYGSEYKR 529 + PY + D + ++ + + EY+D T+ + ++KR Sbjct: 539 LVGPYELHDFFLYYLLRFSYEPSKIYRIARYAFEGEYDDATIYKWLYTFCRRFFIQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + D P Sbjct: 599 SCLPDGPKVGTVALSPRGDWRMPSDA 624 >gi|154495845|ref|ZP_02034541.1| hypothetical protein BACCAP_00125 [Bacteroides capillosus ATCC 29799] gi|150275043|gb|EDN02091.1| hypothetical protein BACCAP_00125 [Bacteroides capillosus ATCC 29799] Length = 641 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 131/637 (20%), Positives = 247/637 (38%), Gaps = 86/637 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A V D N EA +QG+ +++ EL ++GY DL + +Q Sbjct: 6 IKVAAGTPEIRVADCRHNAEACFTLMREAAKQGVKVLVLPELCLTGYTCGDLFLNDTLLQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD--QEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 A+ T+ T + +G P ++ + N ++ G I+ + K LPNY E Sbjct: 66 GAEDALATVLEATRNLDMITALGLPVRNKWDNKLYNCAAVIHKGTILGLVPKTALPNYGE 125 Query: 123 FHEKRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHL 163 F+E R F SG ++ +G+ ICED+W L Sbjct: 126 FYEGRWFASGQGVECYIPLCGQDVDLCARQLFGCTTMPNLVIGVEICEDLWGTQPPSGLL 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS K + R +VTGQ + + +Y + G+ +++F G + Sbjct: 186 AAAGATVMLNLSASDEVVGKAEYRRALVTGQSARLVCGYVYADAGEGESTTDMVFTGHNL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM------------------------ 257 + L + F+ ++E D+ + + M Sbjct: 246 IAENGALLGER--RFACGLTVSEIDVDRLVYERRRMNTYAASKDAMEIGRVNFDLEREET 303 Query: 258 --SDDSASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 + + T ++P + L L+ ++ + ++GLSGG+DS L Sbjct: 304 HLTRRFSPTPFVPEDSTDRAERCDEILKIAALGLKRRLEHTHASAAVVGLSGGLDSTLAI 363 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 IA A+ ++ + +P T+ ++ ++A A LG + I + V F Sbjct: 364 LIAAVAMKLLDRPASDIIAVTMPCFGTTDRTRDNAVELAGRLGATLKRIDIGEAVKQHFK 423 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + Q + + + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 424 DIGQSM--DNHDVTFENGQARERTQVLMDIANQCGGLVVGTGDLSELALGWATYNGDHMS 481 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQT 478 + + KT V L ++ G P + IL+ S EL P Q Sbjct: 482 MYGVNASIPKTLVRHLVAFVA--GDKVAEDPRLSHVLEDILDTPVSPELLPAVGGEIAQR 539 Query: 479 DQESLPPYPILDDIIKRIVE-----------NEESFINN-DQEYNDETVRYVEHLLYGSE 526 ++ + PY + D + I+ E++ + D+ + ++ + + Sbjct: 540 TEDLVGPYELHDFFLYYIIRWGFPPRKVFRLAEQALGDRYDRAVILKWLKNFYRRFFAQQ 599 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 +KR P G K+ + + D P R + E Sbjct: 600 FKRSCLPDGPKVGSVTLSPRGDWRMPSDASARLWMEE 636 >gi|291558013|emb|CBL35130.1| NAD+ synthetase [Eubacterium siraeum V10Sc8a] Length = 648 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 131/637 (20%), Positives = 242/637 (37%), Gaps = 95/637 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + E ++ + L +F EL I+GY +DL ++ + + Sbjct: 6 IKVAAATPEIKVADCKHNAKQIISLARELAKKDVKLAVFPELCITGYTCQDLFYQTTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + + VVG P Q + + N + G ++ K LPNY+EF+ Sbjct: 66 GAKNALVTILEELSELDMITVVGLPMQFESKLYNCAAVTYHGKVLGYVPKQYLPNYNEFY 125 Query: 125 EKRTFISGYSNDPIVF-------------------------------RDIRLGILICEDI 153 E R F + + F D GI +CED+ Sbjct: 126 EMRHFTAWDGSKCEYFLNRFDTDADGECDDSLSAYFGAGLIFCCNNMHDFSFGIELCEDL 185 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD- 212 W +L + GA + +L+AS K + R +V Q + + IY + G+ Sbjct: 186 WSPCPPSTYLAQDGANIILNLSASNEMIGKSEYRRSLVLNQSARLISGYIYCSAGEGEST 245 Query: 213 -ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD-------QQLSQWNYMSDDSAST 264 +L+F G + + L + + FS ++E + + S N D Sbjct: 246 QDLVFSGHNIIAENGATL-AESELFSNDYVISEIDVNKLAFERRKNTSFRNDKCDTETIW 304 Query: 265 MYIPLQE----------EEADYNA-------------CVLSLRDYVQKNNFHKVIIGLSG 301 +PL + Y+A L+ + +IG+SG Sbjct: 305 FDMPLTDTKITRFVSRTPFIPYSADETDKRCELILSMQAHGLKKRLAHTYAKTAVIGISG 364 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L + +A+ ++ + +P T+ ++ +A +A+G + I Sbjct: 365 GLDSTLALLVCANAMKLLGRPMTDIVAVTMPCFGTTKRTKSNAVKICEAIGVTLREIDIT 424 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 D V F + + + +V EN Q+R R +LM ++N + +++ T + SE+++G+ Sbjct: 425 DSVKQHFLDIGHDINDLS--VVFENGQARERTKVLMNIANQTGGLVIGTGDLSELALGWA 482 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T GD + + KT + L S+ + L IL+ S EL P Sbjct: 483 TYNGDHMSMYGVNCSIPKTLIKHLVSYYSKTTDNKLLKES----LEDILDTPVSPELLPA 538 Query: 477 ------QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETV----RYV 518 Q ++ + PY + D + + + D Y+ ET+ + Sbjct: 539 HNGEISQKTEDLVGPYELHDFFLYNGIRWGFTPEKVFRLALYAFDGAYDRETILKWLKTF 598 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + + D P Sbjct: 599 YRRFFSQQFKRSCLPDGPKVGSVTLSPRGDWRMPSDA 635 >gi|317499017|ref|ZP_07957298.1| NAD+ synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893667|gb|EFV15868.1| NAD+ synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 632 Score = 472 bits (1214), Expect = e-130, Method: Composition-based stats. Identities = 128/628 (20%), Positives = 243/628 (38%), Gaps = 86/628 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D A N + + +E + G +++F+EL ISGY DL ++ + Sbjct: 6 IKVAAATPKIKVADPAYNTEEILKIIDETEKNGASILVFSELTISGYTCGDLFLQQPLLT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + + T + +VVG P ++ + N V++ G+I+ + K +LPNYSEF+ Sbjct: 66 ECKNQLLRIVKATENKSMLVVVGCPIVIKQKLYNCAVVISDGSILGIVPKTHLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVFRDIRLG---------------------ILICEDIWKNSNICKHL 163 E R F SG + ++ G ICED+W + Sbjct: 126 ELRHFTSGEGLEEDLWFGEEFGYVNVAVNQLFKCKEIPELVVACEICEDLWVPLPPSTYH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + + +AS K R +V+ Q + + IY + G+ ++++ G Sbjct: 186 AMAGATVICNPSASVETTTKESYRRSLVSNQSARLLAAYIYADAGEGESTQDVVYSGHHL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS-------------------- 261 + L + K F+ + + + ++ M+ Sbjct: 246 ICENGSVL-AEAKRFTNEIIYADIDVQKLAAERRKMTSFPGGQTDDYFEQEFSLEVKENK 304 Query: 262 -----------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + + + + L+ ++ N ++G+SGG+DS L Sbjct: 305 ITRTFPKAPFVPDNQDERDKRCDEILSLQSMGLKKRLEHTNCKHAVVGISGGLDSTLAVL 364 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + A +EN+ + +P T+ ++ ++A + K LG + I V F+ Sbjct: 365 VTARAFDLLDIPRENLICVTMPCFGTTDRTYQNAVSLIKELGATLKEVRIEKAVRQHFAD 424 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + E + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 425 IGH--DENNHDVTYENSQARERTQILMDMANQYNGMVIGTGDMSELALGWATYNGDHMSM 482 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + L + +L+ S EL P Q Sbjct: 483 YAVNCSVPKTLVRYLVLYYAETTENKKLSE----VLMDVLDTPVSPELLPPVDGVISQKT 538 Query: 480 QESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEY 527 ++ + PY + D + ++ + + D Y+DET++ + ++ Sbjct: 539 EDLVGPYELHDFFLYYMLRFGFPKAKLYRMAKLTFDGVYDDETIKKWLDKFYWRFFSQQF 598 Query: 528 KRRQAPVGTKITAKSFGR--DRLYPISN 553 KR P G K+ + + D P Sbjct: 599 KRSCLPDGPKVGSVAVSPRGDLRMPSDA 626 >gi|291560729|emb|CBL39529.1| NAD+ synthetase [butyrate-producing bacterium SSC/2] Length = 632 Score = 472 bits (1214), Expect = e-130, Method: Composition-based stats. Identities = 128/628 (20%), Positives = 243/628 (38%), Gaps = 86/628 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D A N + + +E + G +++F+EL ISGY DL ++ + Sbjct: 6 IKVAAATPKIKVADPAYNTEEILKIIDETEKNGASILVFSELTISGYTCGDLFLQQPLLT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + + T + +VVG P ++ + N V++ G+I+ + K +LPNYSEF+ Sbjct: 66 ECKNQLLRIVKATENKSMLVVVGCPIVIKQKLYNCAVVISDGSILGIVPKTHLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVFRDIRLG---------------------ILICEDIWKNSNICKHL 163 E R F SG + ++ G ICED+W + Sbjct: 126 ELRHFTSGEGLEEDLWFGEEFGYVNVAVNQLFKCKEIPELVVACEICEDLWVPLPPSTYH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + + +AS K R +V+ Q + + IY + G+ ++++ G Sbjct: 186 AMAGATVICNPSASVETTTKESYRRSLVSNQSARLLAAYIYADAGEGESTQDVVYSGHHL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS-------------------- 261 + L + K F+ + + + ++ M+ Sbjct: 246 ICENGSVL-AEAKRFTNEIIYADIDVQKLAAERRKMTSFPGGQTDDYFEQEFSLEVKENK 304 Query: 262 -----------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + + + + L+ ++ N ++G+SGG+DS L Sbjct: 305 ITRTFPKAPFVPDNQDERDKRCDEILSLQSMGLKKRLEHTNCKHAVVGISGGLDSTLAVL 364 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + A +EN+ + +P T+ ++ ++A + K LG + I V F+ Sbjct: 365 VTARAFDLLDIPRENLICVTMPCFGTTDRTYQNAVSLIKELGATLKEVRIEKAVRQHFAD 424 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + E + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 425 IGH--DENNHDVTYENSQARERTQILMDMANQYNGMVIGTGDMSELALGWATYNGDHMSM 482 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + L + +L+ S EL P Q Sbjct: 483 YAVNCSVPKTLVRYLVLYYAETTENKKLSE----VLMDVLDTPVSPELLPPVDGVISQKT 538 Query: 480 QESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEY 527 ++ + PY + D + ++ + + D Y+DET++ + ++ Sbjct: 539 EDLVGPYELHDFFLYYMLRFGFPKSKLYRMAKLTFDGVYDDETIKKWLDKFYWRFFSQQF 598 Query: 528 KRRQAPVGTKITAKSFGR--DRLYPISN 553 KR P G K+ + + D P Sbjct: 599 KRSCLPDGPKVGSVAVSPRGDLRMPSDA 626 >gi|167766739|ref|ZP_02438792.1| hypothetical protein CLOSS21_01245 [Clostridium sp. SS2/1] gi|167711493|gb|EDS22072.1| hypothetical protein CLOSS21_01245 [Clostridium sp. SS2/1] Length = 632 Score = 472 bits (1214), Expect = e-130, Method: Composition-based stats. Identities = 128/628 (20%), Positives = 243/628 (38%), Gaps = 86/628 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D A N + + +E + G +++F+EL ISGY DL ++ + Sbjct: 6 IKVAAATPKIKVADPAYNTEEILKIIDETEKNGASILVFSELTISGYTCGDLFLQQPLLT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + + T + +VVG P ++ + N V++ G+I+ + K +LPNYSEF+ Sbjct: 66 ECKNQLLRIVKATENKSMLVVVGCPIVIKQKLYNCAVVISDGSILGIVPKTHLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVFRDIRLG---------------------ILICEDIWKNSNICKHL 163 E R F SG + ++ G ICED+W + Sbjct: 126 ELRHFTSGEGLEEDLWFGEEFGYVNVAVNQLFKCKEIPELVVACEICEDLWVPLPPSTYH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + + +AS K R +V+ Q + + IY + G+ ++++ G Sbjct: 186 AMAGATVICNPSASVETTTKESYRRSLVSNQSARLLAAYIYADAGEGESTQDVVYSGHHL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS-------------------- 261 + L + K F+ + + + ++ M+ Sbjct: 246 ICENGSVL-AEAKRFTNEIIYADIDVQKLAAERRKMTSFPGGQTEDYFEQEFSLEVKENK 304 Query: 262 -----------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + + + + L+ ++ N ++G+SGG+DS L Sbjct: 305 ITRTFPKAPFVPDNQDERDKRCDEILSLQSMGLKKRLEHTNCKHAVVGISGGLDSTLAVL 364 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + A +EN+ + +P T+ ++ ++A + K LG + I V F+ Sbjct: 365 VTARAFDLLDIPRENLICVTMPCFGTTDRTYQNAVSLIKELGATLKEVRIEKAVRQHFAD 424 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + E + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 425 IGH--DENNHDVTYENSQARERTQILMDMANQYNGMVIGTGDMSELALGWATYNGDHMSM 482 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L + L + +L+ S EL P Q Sbjct: 483 YAVNCSVPKTLVRYLVLYYAETTDNKKLSE----VLMDVLDTPVSPELLPPVDGVISQKT 538 Query: 480 QESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEY 527 ++ + PY + D + ++ + + D Y+DET++ + ++ Sbjct: 539 EDLVGPYELHDFFLYYMLRFGFPKSKLYRMAKLTFDGVYDDETIKKWLDKFYWRFFSQQF 598 Query: 528 KRRQAPVGTKITAKSFGR--DRLYPISN 553 KR P G K+ + + D P Sbjct: 599 KRSCLPDGPKVGSVAVSPRGDLRMPSDA 626 >gi|253564970|ref|ZP_04842426.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_2_5] gi|265766074|ref|ZP_06094115.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 2_1_16] gi|251946435|gb|EES86812.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_2_5] gi|263253742|gb|EEZ25207.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 2_1_16] Length = 641 Score = 472 bits (1214), Expect = e-130, Method: Composition-based stats. Identities = 130/631 (20%), Positives = 239/631 (37%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLITIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + T ++G P V+N+ V++ G I+ V K LPNY EF+ Sbjct: 66 QAEMALIQILNSTRQLDIISILGMPVVVNSTVINAAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSENSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWATVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHNYLCSLISQQSARCISGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------ 271 L + + F EQ + E + ++ + +A+ P +E Sbjct: 246 -GYLLARSERFCLEEQLIINEIDVECIRAERRVNTTFAANKANCPGKEAIRISTEFVNSK 304 Query: 272 -----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 E ++ + L + +IG+SGG+DS L Sbjct: 305 DLNLTRTFNPHPFVPQGSELNSRCEEIFSIQIAGLAQRLLHTGAKTAVIGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K +++ I +P T+ ++ +A +LG + I + F Sbjct: 365 LLVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMNSLGVSIREISIREACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + L + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIGHDLN--IHDVTYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + G+ ++ I++ S EL P Sbjct: 483 SMYGVNAGIPKTLVKHLVQWVAEN----GMDEASKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEH----LLYG 524 Q ++ + PY + D + + + Y+DET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIYFLAQTAFSGVYDDETIKKWLQTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|167758826|ref|ZP_02430953.1| hypothetical protein CLOSCI_01169 [Clostridium scindens ATCC 35704] gi|167663566|gb|EDS07696.1| hypothetical protein CLOSCI_01169 [Clostridium scindens ATCC 35704] Length = 641 Score = 472 bits (1214), Expect = e-130, Method: Composition-based stats. Identities = 135/638 (21%), Positives = 250/638 (39%), Gaps = 87/638 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N K +E ++G ++ F EL ++GY DL ++ +Q Sbjct: 8 VKVAAATPDIRVADVTYNTEKICGLIDETVKEGAKVVAFPELCVTGYTCGDLFTQEVLLQ 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ + S T A I VG P + + N L+ G I+ + K LPNY EF+ Sbjct: 68 EARAALHKIASHTKGKDALIFVGVPVAVEGKLYNVAAALNQGKILGLTTKSFLPNYGEFY 127 Query: 125 EKRTFISGYS-NDPIVFRDIR------------------LGILICEDIWKNSNICKHLKK 165 E R F G S I+F + + ICED W + + Sbjct: 128 EMRQFTEGPSVAREILFDGEKMPFGPQLLFVADSMESLVVSAEICEDAWSSVPPSIEAAR 187 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R ++ GQ + + +Y N G+ +L+F G + Sbjct: 188 EGAVIIANCSASDETVGKSTYRRNLIEGQSARLICGYLYANAGEGESTTDLVFGGHNLIA 247 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQ-------------------------QLSQWNYMS 258 + L + + F TE + + ++ Sbjct: 248 ENGSVLK-EGRRFENGVIYTEIDIKRLLGERRKNTTFQTAKEPKLIRVPFTICKEETALT 306 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI- 311 S ++P +E E + L+ + ++G+SGG+DS L + Sbjct: 307 RTFPSRPFVPEEEGERARRCEEILMIQAMGLKKRISHARAKSAVVGISGGLDSTLALLVT 366 Query: 312 --AVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A DALG E + + +P T+ ++ ++A ++ LG +PI V F + Sbjct: 367 AKAFDALGMERKDIVAVTMPCFGTTDRTYQNACKMSRKLGATLREIPIGASVEQHFKDIG 426 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 L + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 427 HDLDD--HSVTYENSQARERTQVLMDVANQAGGIVIGTGDMSELALGWATYNGDHMSMYG 484 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + + L + +L+ S EL P Q ++ Sbjct: 485 VNASVPKTLVRHLVHYYADSCEDAELKA----VLYDVLDTPVSPELLPPKDGEIAQKTED 540 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYGSEYKR 529 + PY + D + ++ + + + EY++ET+ + ++KR Sbjct: 541 LVGPYELHDFFLYYLLRFGYEPGKIYRIAKRSFEGEYDEETIYKWLHTFCRRFFTQQFKR 600 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN---KFRDHISEE 562 P G K+ + D P + + + +E Sbjct: 601 SCLPDGPKVGTVALSPRGDWRMPSDACSDVWLEELEKE 638 >gi|325262098|ref|ZP_08128836.1| glutamine-dependent NAD+ synthetase [Clostridium sp. D5] gi|324033552|gb|EGB94829.1| glutamine-dependent NAD+ synthetase [Clostridium sp. D5] Length = 640 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 131/631 (20%), Positives = 240/631 (38%), Gaps = 86/631 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K+ +K+A A + V D+ N K A EEA+++ +++F EL I+GY DL + Sbjct: 1 MKQGFVKVAAATPDIRVADVTYNTKKICEAIEEADQERAKILVFPELCITGYTCGDLFTQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 ++ +A+ + T D + VG P + N L+ G ++ + K LPN Sbjct: 61 DVLLRDAKAALLKIAGFTADKDILVFVGLPLSVDGKLYNVAAALNRGEVLGLTTKTFLPN 120 Query: 120 YSEFHEKRTFISG-YSNDPIVFRD--IRLG----------------ILICEDIWKNSNIC 160 Y EF+E R F G + I+F + G ICED+W Sbjct: 121 YGEFYEMRQFTPGPDAAREILFDGSLVPFGPQILFQATTMEELIVSAEICEDVWSPIPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 +GA + + +AS K + R E++ GQ + + IY N G+ +L+F G Sbjct: 181 IQAAMEGATVIVNCSASDETIGKGRYRRELIQGQSARLIAGYIYANAGEGESTTDLVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYD-------------------------QQLSQ 253 + + L + + F +E + Sbjct: 241 HNLITENGAVLK-EARRFRNDMIYSELDIYRLTGERRKNTTFKTTGERRLIRVPFYMELE 299 Query: 254 WNYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++ ++P+ E E + L+ + + ++G+SGG+DS L Sbjct: 300 KTTLTRHFPKHPFVPVNEKERARRCEEILTIQAMGLKKRLAHTHARSAVVGISGGLDSTL 359 Query: 308 CAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + A K+ + + +P T+ ++ ++A A LG + I D V+ Sbjct: 360 ALLVTARAFEMLGRDKKEIIAVTMPCFGTTDRTYQNACKMAVQLGAGLREVGIADAVSIH 419 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + + + EN Q+R R +LM ++N M++ T + SE+++G+ T GD Sbjct: 420 FRDIGH--DPKDHSVTYENAQARERTQVLMDIANEMGGMVIGTGDMSELALGWATYNGDH 477 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------H 476 + + KT V L + L + +L+ S EL P Sbjct: 478 MSMYGVNASVPKTLVRHLVKYAADVTPDEQLKE----VLYDVLDTPVSPELLPPKDGNIA 533 Query: 477 QTDQESLPPYPILDDIIKRIV----ENEESFINNDQEYND--------ETVRYVEHLLYG 524 Q ++ + PY + D + +V E + F + + D + + + Sbjct: 534 QKTEDLVGPYELHDFFLYYLVRFGYEPSKIFRLAAETFEDSYDNVTILKWLETFCRRFFS 593 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + D P Sbjct: 594 QQFKRSCLPDGPKVGTVALSPRGDWRMPSDA 624 >gi|282858831|ref|ZP_06267976.1| NAD+ synthetase [Prevotella bivia JCVIHMP010] gi|282588400|gb|EFB93560.1| NAD+ synthetase [Prevotella bivia JCVIHMP010] Length = 655 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 139/651 (21%), Positives = 249/651 (38%), Gaps = 101/651 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+A+ + A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPSVKVADTQYNLAEIEKQVIIAEGEGVEIIVFPELSLTGYSCQDLFHQQILLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +++ L T ++VG P +LN +++ G +I + K LPNY EF+ Sbjct: 66 NIETSVIQLLDFTRQLDITVIVGAPICADSVLLNCALVIQHGKLIGIVPKTYLPNYGEFY 125 Query: 125 EKRTFISGYS---------NDPIVF----------RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S + I + ++ GI ICED+W L Sbjct: 126 EKRWFASSQDLQFQSIYYVGEKITISSDIQLFTTSQGVKFGIEICEDLWAPIPPSNQLTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K +V Q + IY G+ ++++ G F + Sbjct: 186 AGAELIFNLSASDDLIGKHNYLKSLVAQQSARTISGYIYSGCGFGESTQDVVYGGNGFIY 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP--------------- 268 + QL + K F ++ + D + + S+ + P Sbjct: 246 EN-GQLLAEAKRFEIESQLIISEVDIEKLRTERRSNTTFVNAQRPSVMQRLRANNQLPLQ 304 Query: 269 --------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVI 296 + E N V L + N V+ Sbjct: 305 NITACIPASIQRDFVLTRLVDKYPFIPKGDKLREHCEEILNIQVCGLAKRLSHINCKTVV 364 Query: 297 IGLSGGIDSALCAAIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 IG+SGG+DS L +A + + I +P T+ ++ +A + LG Sbjct: 365 IGVSGGLDSTLALLVATQTFDKLGYDRRGIIGITMPGFGTTDRTYNNAITLMQNLGITIR 424 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I V F+ + + + I EN Q+R R ILM +SN +++ T + SE+ Sbjct: 425 EISIAASVKQHFTDIEHNI--DVHDITYENSQARERTQILMDISNQVGGIVIGTGDLSEL 482 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 ++G+ T GD + + KT + L S+ +G+ + + I+ S Sbjct: 483 ALGWCTYNGDHMSMYAVNVGIPKTLIKHLVSYVAENGVEDSIK----LTLEDIVNTPISP 538 Query: 472 ELRPH-------QTDQESLPPYPILDDIIKRIV----ENEESFINNDQEYNDE------- 513 EL P Q ++ + PY + D + ++ ++ F Q + +E Sbjct: 539 ELTPADENGEIVQKTEDLVGPYELHDFFLYYVLRFGFRPKKIFWLAQQAFKEEYADGIIL 598 Query: 514 -TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 +R + ++KR P G K+ + S D P D I + Sbjct: 599 HWLRIFYKRFFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDAMTTDWIKD 649 >gi|291531233|emb|CBK96818.1| NAD+ synthetase [Eubacterium siraeum 70/3] Length = 648 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 132/637 (20%), Positives = 242/637 (37%), Gaps = 95/637 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + +E ++ + L +F EL I+GY +DL ++ + + Sbjct: 6 IKVAAATPEIKVADCKYNAKQIISLAKELAKKDVKLAVFPELCITGYTCQDLFYQTTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + + VVG P Q N + G ++ K LPNY+EF+ Sbjct: 66 GAKNALITILDELSELDMITVVGLPMQYDSKQYNCAAVTYHGKVLGYVPKQYLPNYNEFY 125 Query: 125 EKRTFISGYSNDPIVF-------------------------------RDIRLGILICEDI 153 E R F + + F D GI +CED+ Sbjct: 126 EMRHFTAWDGSKCEYFFNRFDTDADGECDDSLSAYFGAGLIFCCNNMHDFSFGIELCEDL 185 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD- 212 W +L ++GA + +L+AS K + R +V Q + + IY + G+ Sbjct: 186 WSPCPPSTYLAQEGANIILNLSASNEMIGKSEYRRSLVLNQSARLISGYIYCSAGEGEST 245 Query: 213 -ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD-------QQLSQWNYMSDDSAST 264 +L+F G + + L + + FS ++E + + S N D Sbjct: 246 QDLVFSGHNIIAENGATL-AESELFSNDYVISEIDVNKLAFERRKNTSFRNDKCDTETIW 304 Query: 265 MYIPLQE----------EEADYNA-------------CVLSLRDYVQKNNFHKVIIGLSG 301 IPL + Y+A L+ + +IG+SG Sbjct: 305 FDIPLTDTKITRFVSRTPFIPYSADETDKRCELILSMQAHGLKKRLAHTYAKTAVIGISG 364 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L + +A+ ++ + +P T+ ++ +A +A+G + I Sbjct: 365 GLDSTLALLVCANAMKLLGRPMTDIVAVTMPCFGTTKRTKSNAVKICEAIGVTLREIDIT 424 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 D V F + + + +V EN Q+R R +LM ++N + +++ T + SE+++G+ Sbjct: 425 DSVKQHFLDIGHDINDLS--VVFENGQARERTKVLMNIANQTGGLVIGTGDLSELALGWA 482 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T GD + + KT + L S+ + L IL+ S EL P Sbjct: 483 TYNGDHMSMYGVNCSIPKTLIKHLVSYYSKTTDNKLLKES----LEDILDTPVSPELLPA 538 Query: 477 ------QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETV----RYV 518 Q ++ + PY + D + + + D Y+ ET+ + Sbjct: 539 HNGEISQKTEDLVGPYELHDFFLYNGIRWGFTPEKVFRLALYAFDGAYDRETILKWLKTF 598 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + + D P Sbjct: 599 YRRFFSQQFKRSCLPDGPKVGSVTLSPRGDWRMPSDA 635 >gi|60682492|ref|YP_212636.1| NAD synthetase [Bacteroides fragilis NCTC 9343] gi|60493926|emb|CAH08717.1| putative glutamine-dependent NAD+ synthetase [Bacteroides fragilis NCTC 9343] Length = 641 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 130/631 (20%), Positives = 239/631 (37%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLITIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + T ++G P V+N+ V++ G I+ V K LPNY EF+ Sbjct: 66 QAEMALIQILNSTRQLDIISILGMPVVVNSTVINAAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSENSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWATVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHNYLCSLISQQSARCISGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------ 271 L + + F EQ + E + ++ + +A+ P +E Sbjct: 246 -GYLLARSERFCMEEQLIINEIDVECIRAERRVNTTFAANKANCPGKEAVRISTEFVNSK 304 Query: 272 -----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 E ++ + L + +IG+SGG+DS L Sbjct: 305 DLNLTRTFNPHPFVPQGNELNSRCEEIFSIQIAGLAQRLLHTGAKTAVIGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K +++ I +P T+ ++ +A +LG + I + F Sbjct: 365 LLVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMNSLGVSIREISIREACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + L + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIGHDLN--IHDVTYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + G+ ++ I++ S EL P Sbjct: 483 SMYGVNAGIPKTLVKHLVQWVAEN----GMDETSKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEH----LLYG 524 Q ++ + PY + D + + + Y+DET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIYFLAQTAFSGVYDDETIKKWLQTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|317479247|ref|ZP_07938382.1| NAD+ synthetase [Bacteroides sp. 4_1_36] gi|316904535|gb|EFV26354.1| NAD+ synthetase [Bacteroides sp. 4_1_36] Length = 641 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 128/630 (20%), Positives = 238/630 (37%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + A+ +G+ +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNASEIEKEIIIADGKGVQIIAFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQMDIISILGMPVALNGVLLNAAVVIQKGKVLGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISG-----------------YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S + D G+ ICED+W L QG Sbjct: 126 EKRWFTSACDVAENSVRLCGQIIPMGRDLLFETADTTFGVEICEDLWAPIPPSSTLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNLSADNEGIGKHNYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 LA + F Q ++E + ++ + +A Sbjct: 246 GTLLAANERFSFEGQVVISEIDVEHLRTERRVNTTFAACHANCVSALPVRISTEYVNSRD 305 Query: 263 --------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P + E ++ V L + +IG+SGG+DS L Sbjct: 306 LNLTRTFEPHPFVPQGIALDERCEEVFSIQVSGLAQRLVHTKAKSAVIGISGGLDSTLAL 365 Query: 310 AIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V ++ + + +P T+ ++ +A +LG + I + F Sbjct: 366 LVCVKTFDKLGWSRQGIVGVTMPGFGTTDRTYTNAIDLMNSLGVTVREVSIKEACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDVHVHDV--VYENAQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W H + + I++ S EL P Q Sbjct: 484 MYGVNASVPKTLVKHLVKWVAEH----DMDDASRATLLDIVDTPISPELIPADENGNIQQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + Y++ET++ + Sbjct: 540 ITEDLVGPYELHDFFLYYFLRCGFRPSKIFFLAARTFKGMYDEETIKKWLQTFCRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISLSPRGDWRMPSDA 629 >gi|167751679|ref|ZP_02423806.1| hypothetical protein EUBSIR_02685 [Eubacterium siraeum DSM 15702] gi|167655487|gb|EDR99616.1| hypothetical protein EUBSIR_02685 [Eubacterium siraeum DSM 15702] Length = 648 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 131/637 (20%), Positives = 241/637 (37%), Gaps = 95/637 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + +E ++ + L +F EL I+GY +DL ++ + + Sbjct: 6 IKVAAATPEIKVADCKHNAKQIISLAKELAKKDVKLAVFPELCITGYTCQDLFYQTTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + + VVG P Q + N + G ++ K LPNY+EF+ Sbjct: 66 GAKNALVTILEELSELDMITVVGLPMQFDSKLYNCAAVTYHGKVLGYVPKQYLPNYNEFY 125 Query: 125 EKRTFISGYS-------------------------------NDPIVFRDIRLGILICEDI 153 E R F + D GI +CED+ Sbjct: 126 EMRHFTAWDGSKCEYFLNRFDTDADGECDDSLSAYFGAGLIFCCNTMHDFSFGIELCEDL 185 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD- 212 W +L ++GA + +L+AS K + R +V Q + + IY + G+ Sbjct: 186 WSPCPPSTYLAQEGANIILNLSASNEMIGKSEYRRSLVLNQSARLISGYIYCSAGEGEST 245 Query: 213 -ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD-------QQLSQWNYMSDDSAST 264 +L+F G + + L + + FS ++E + + S N D Sbjct: 246 QDLVFSGHNIIAENGATL-AESELFSNDYIISEIDVNKLAFERRKNTSFRNDKCDTETIW 304 Query: 265 MYIPLQE----------EEADYNA-------------CVLSLRDYVQKNNFHKVIIGLSG 301 IPL + Y+A L+ + +IG+SG Sbjct: 305 FDIPLTDTKITRFVSRTPFIPYSADETDKRCELILSMQAHGLKKRLAHTYAKTAVIGISG 364 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L + +A+ ++ + +P T+ ++ +A +A+G + I Sbjct: 365 GLDSTLALLVCANAMKLLGRPMTDIVAVTMPCFGTTKRTKSNAVKICEAIGVTLREIDIT 424 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 D V F + + + +V EN Q+R R +LM ++N + +++ T + SE+++G+ Sbjct: 425 DSVKQHFLDIGHDINDLS--VVFENGQARERTKVLMNIANQTGGLVIGTGDLSELALGWA 482 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 T GD + + KT + L S+ + L IL+ S EL P Sbjct: 483 TYNGDHMSMYGVNCSIPKTLIKHLVSYYSKTTDNKLLKES----LEDILDTPVSPELLPA 538 Query: 477 ------QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETV----RYV 518 Q ++ + PY + D + + + D Y+ ET+ + Sbjct: 539 HNGEISQKTEDLVGPYELHDFFLYNGIRWGFTPEKVFRLALYAFDGAYDRETILKWLKTF 598 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + + D P Sbjct: 599 YRRFFSQQFKRSCLPDGPKVGSVTLSPRGDWRMPSDA 635 >gi|160888957|ref|ZP_02069960.1| hypothetical protein BACUNI_01377 [Bacteroides uniformis ATCC 8492] gi|270293917|ref|ZP_06200119.1| conserved hypothetical protein [Bacteroides sp. D20] gi|156861424|gb|EDO54855.1| hypothetical protein BACUNI_01377 [Bacteroides uniformis ATCC 8492] gi|270275384|gb|EFA21244.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 641 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 128/630 (20%), Positives = 238/630 (37%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + A+ +G+ +I F EL I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNASEIEKEIIIADGKGVQIIAFPELCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIQILNNTRQMDIISILGMPVALNGVLLNAAVVIQKGRVLGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISG-----------------YSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S + D G+ ICED+W L QG Sbjct: 126 EKRWFTSACDVAENSVRLCGQIIPMGRDLLFETADTTFGVEICEDLWAPIPPSSTLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNLSADNEGIGKHNYLRSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA---------------------- 262 LA + F Q ++E + ++ + +A Sbjct: 246 GTLLAANERFSFEGQVVISEIDVEHLRTERRVNTTFAACHANCVSALPVRISTEYVNSRD 305 Query: 263 --------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P + E ++ V L + +IG+SGG+DS L Sbjct: 306 LNLTRTFEPHPFVPQGIALDERCEEVFSIQVSGLAQRLVHTKAKSAVIGISGGLDSTLAL 365 Query: 310 AIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V ++ + + +P T+ ++ +A +LG + I + F Sbjct: 366 LVCVKTFDKLGWSRQGIVGVTMPGFGTTDRTYTNAIDLMNSLGVTVREVSIKEACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDVHVHDV--VYENAQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W H + + I++ S EL P Q Sbjct: 484 MYGVNASVPKTLVKHLVKWVAEH----DMDDASRATLLDIVDTPISPELIPADENGNIQQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + + Y++ET++ + Sbjct: 540 ITEDLVGPYELHDFFLYYFLRCGFRPSKIFFLAARTFKGMYDEETIKKWLQTFCRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISLSPRGDWRMPSDA 629 >gi|225026303|ref|ZP_03715495.1| hypothetical protein EUBHAL_00544 [Eubacterium hallii DSM 3353] gi|224956367|gb|EEG37576.1| hypothetical protein EUBHAL_00544 [Eubacterium hallii DSM 3353] Length = 647 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 129/627 (20%), Positives = 232/627 (37%), Gaps = 85/627 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ +A ++ V + N K ++A++ G+ L++F EL ++ Y DL +K+ + Sbjct: 10 LKVGVASVDVEVANPIHNKEKVMEVIKKADKNGVKLLVFPELVLTAYTCNDLFLQKTLLD 69 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + +T IV+G P + N V G I+ V K LPNYSEF+ Sbjct: 70 EAKNQLFAILEETKGQDMVIVLGLPLTVNHKLYNCAVFAQGGKILGVVPKHYLPNYSEFY 129 Query: 125 EKRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 E R F G ++ +G ICED+W H Sbjct: 130 EARHFAPGEEEVRKIRLGGKDVPFGMNLLFCCENMEELVIGCEICEDLWCPLPPSTHHAL 189 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +V+ Q + + +Y G+ +L++ G + Sbjct: 190 AGATVICNPSASDETTTKDTYRRNLVSQQSARLVCAYLYSCAGEGESTQDLVYSGHNMIA 249 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + + F TE + + M+ Sbjct: 250 EYGSILK-ESRRFQNSYIETEIDLQRLEADRRRMTTFVTEGADKNYERVYFRLKEERTEL 308 Query: 259 -------DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 S + + + L+ + + ++G+SGG+DS L + Sbjct: 309 SRYFERTPFIPSNKIDREKRCDEILTIQAMGLKKRLAHTHCQSAVVGISGGLDSTLAVLV 368 Query: 312 AVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A +EN+ + +P T+ ++ +A K LG + I+ V FS + Sbjct: 369 TARAFDMLKIPRENIVCVTMPCFGTTDRTYSNAVTLTKKLGASLREIRINKAVEQHFSDI 428 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 E + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD + Sbjct: 429 GH--DPEIHNVTYENSQARERTQILMDIANQTNGMVIGTGDMSELALGWATYNGDHMSMY 486 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L + L + IL+ S EL P Q + Sbjct: 487 AVNCSVPKTLVRHLVRYYADTSEEQELKE----VLLDILDTPVSPELLPPVDGVISQKTE 542 Query: 481 ESLPPYPILDDIIKRIVE----NEESFINNDQEYNDE--------TVRYVEHLLYGSEYK 528 + + PY + D + ++ E+ F Q + +E +R + +K Sbjct: 543 DLVGPYELHDFFLYYMLRFGFHPEKIFRLTRQAFGEEYDVATCYKWLRTFCWRFFAQHFK 602 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISN 553 R P G K+ + + D P Sbjct: 603 RSCLPDGPKVGSIAVSPRGDLRMPSDA 629 >gi|301163951|emb|CBW23506.1| putative glutamine-dependent NAD+ synthetase [Bacteroides fragilis 638R] Length = 641 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 130/631 (20%), Positives = 239/631 (37%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLITIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + T ++G P V+N+ V++ G I+ V K LPNY EF+ Sbjct: 66 QAEMALIQILNSTRQLDIISILGMPVVVNSTVINAAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSENSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWATVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHNYLCSLISQQSARCISGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------ 271 L + + F EQ + E + ++ + +A+ P +E Sbjct: 246 -GYLLARSERFCMEEQLIINEIDVECIRAERRVNTTIAANKANCPGKEAVRISTEFVNSK 304 Query: 272 -----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 E ++ + L + +IG+SGG+DS L Sbjct: 305 DLNLTRTFNPHPFVPQGSELNSRCEEIFSIQIAGLAQRLLHTGAKTAVIGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K +++ I +P T+ ++ +A +LG + I + F Sbjct: 365 LLVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMNSLGVSIREISIREACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + L + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIGHDLN--IHDVTYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + G+ ++ I++ S EL P Sbjct: 483 SMYGVNAGIPKTLVKHLVQWVAEN----GMDETSKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEH----LLYG 524 Q ++ + PY + D + + + Y+DET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIYFLAQTAFSGVYDDETIKKWLQTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|42525160|ref|NP_970540.1| NH(3)-dependent NAD(+) synthetase [Bdellovibrio bacteriovorus HD100] gi|39577371|emb|CAE81194.1| NH(3)-dependent NAD(+) synthetase [Bdellovibrio bacteriovorus HD100] Length = 540 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 197/568 (34%), Positives = 292/568 (51%), Gaps = 44/568 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA+AQ+NPV+ D N K +A ++ DL++F E + GY P DL+ ++ + Sbjct: 1 MRIAVAQINPVLADFQFNKEKILDFVNQAVQRKCDLVVFPECTLFGYHPFDLLEREKLVA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF----PRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 + L G+++G P + NS ++ G K LP Sbjct: 61 KQEAEFKDLIKKLPK-NIGVIMGLITRNPAKKGRPYFNSAALIAKGEKPRFFHKQLLPTG 119 Query: 121 SEFHEKRTFISGY-SNDPIVFRDIRLGILICEDIWKNS----------NICKHLKKQGAE 169 F E R SG S + ++ + + ICEDIW N +KKQ + Sbjct: 120 DVFDEARFIESGDVSKNYFKWKGKKFFLTICEDIWAWPDAKGNSPYRENPLAKVKKQKID 179 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL 229 + +L+ASPY+ K+K+R + ++ + PI+YVN VG QDE+IFDG SF D + + Sbjct: 180 MVINLSASPYFVGKMKQREYVTQKTAAYFNAPIMYVNLVGAQDEIIFDGGSFVLDKKGKK 239 Query: 230 AFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK 289 + FSE + + + + ++ L+ E A VL +RD+ +K Sbjct: 240 LLTCQQFSEDINVIDLNTLEVWNKN------------PKLEAIEELRRALVLGIRDFCEK 287 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 KV +GLSGGIDSA+ A +AVDALG NV + LP + +PQSL A A +G Sbjct: 288 TGIKKVHLGLSGGIDSAVVAVLAVDALGPANVVGVGLPGPFNAPQSLTLAKDLASNMGVD 347 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + + I + +++ L E IV EN+Q+R+RG LMA SN +MLLTT NKS Sbjct: 348 FKTVEIGPMYESVLKALNKGLGLEGFSIVNENLQARLRGLTLMAWSNKENSMLLTTGNKS 407 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E + GY TLYGDM GG PL DL K QV+ LA + N G EVIP I+++ P Sbjct: 408 EYASGYSTLYGDMCGGLAPLGDLTKAQVYALARYYNKQG---------EVIPQEIIDRPP 458 Query: 470 SAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKR 529 SAELRP+Q DQ+SLP Y LD + +VE + T +++ +L +E+KR Sbjct: 459 SAELRPNQKDQDSLPEYDDLDKAVTYLVEKSGPAKS-------ATEKWLLPVLMRTEFKR 511 Query: 530 RQAPVGTKITAKSFGRDRLYPISNKFRD 557 QAP K++ SFGR R YP++++ R+ Sbjct: 512 WQAPPILKVSQHSFGRGRRYPVAHRARE 539 >gi|255010595|ref|ZP_05282721.1| NAD synthetase [Bacteroides fragilis 3_1_12] gi|313148405|ref|ZP_07810598.1| glutamine-dependent NAD+ synthetase [Bacteroides fragilis 3_1_12] gi|313137172|gb|EFR54532.1| glutamine-dependent NAD+ synthetase [Bacteroides fragilis 3_1_12] Length = 641 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 129/641 (20%), Positives = 243/641 (37%), Gaps = 90/641 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLIAIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T ++G P ++N+ V + G I+ V K LPNY EF+ Sbjct: 66 QAEMALMQILNNTRQLDIISILGMPVVVNSTIINAAVAIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSETSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWSTVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHSYLCSLISQQSARCLSGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF-SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 LA + EQ ++E + ++ + +A+ P +E Sbjct: 246 GGLLARSERFCLEEQLVISEIDVECIRAERRINTTFAANKANCPGKEAIRVSTEYTNSKD 305 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E ++ V L + ++G+SGG+DS L Sbjct: 306 LNLTRTFNPHPFVPQGAELNNRCEEIFSIQVAGLAQRLVHTGAKTAVVGISGGLDSTLAL 365 Query: 310 AIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V K +++ I +P T+ ++ +A A +LG + I + F Sbjct: 366 LVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIALMNSLGISIREISIREACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + L + EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 426 DIGHDLN--VHDVTYENSQARERTQILMDVANQICGLVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + + +++ I++ S EL P Q Sbjct: 484 MYGVNASIPKTLVQHLVQWVAENEVDG----ESKITLLDIVDTPISPELIPADENGEIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEH----LLYGS 525 ++ + PY + D + + + + Y+ ET++ + Sbjct: 540 KTEDLVGPYELHDFFLYYFLRFGFRPSKIYFLAQTVFNGIYDAETIKKWLQTFFRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPIS---NKFRDHISE 561 ++KR P G K+ + S D P + +SE Sbjct: 600 QFKRSCLPDGPKVGSVSISPRGDWRMPSDASSAAWLKEVSE 640 >gi|53714469|ref|YP_100461.1| NAD synthetase [Bacteroides fragilis YCH46] gi|52217334|dbj|BAD49927.1| glutamine-dependent NAD+ synthetase [Bacteroides fragilis YCH46] Length = 641 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 130/631 (20%), Positives = 239/631 (37%), Gaps = 89/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + A +G+ ++ F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNSERLEGLITIAEGKGVQILTFPEMCITGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + T ++G P V+N+ V++ G I+ V K LPNY EF+ Sbjct: 66 QAEMALIQILNSTRQLDIISILGMPVVVNSTVINAAVVIQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S +N + GI ICED+W L QG Sbjct: 126 EQRWFTSALQVSENSVRLCGQIVPMGNNLLFETAETTFGIEICEDLWATVPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEIIFNLSADDEGIGKHNYLCSLISQQSARCISGYVFSSSGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------ 271 L + + F EQ + E + ++ + +A+ P +E Sbjct: 246 -GYLLARSERFCMEEQLIINEIDVECIRAERRVNTTFAANKANCPGKEAVRISTEFVNSK 304 Query: 272 -----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 E ++ + L + +IG+SGG+DS L Sbjct: 305 DLNLTRTFNPHPFVPQGSELNSRCEEIFSIQIAGLAQRLLHTGARTAVIGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K +++ I +P T+ ++ +A +LG + I + F Sbjct: 365 LLVCVKTFDKLGLSRKDILGITMPGFGTTDRTYHNAIDLMNSLGVSIREISIREACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + L + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIGHDLN--IHDVTYENSQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + G+ ++ I++ S EL P Sbjct: 483 SMYGVNAGIPKTLVKHLVQWVAEN----GMDETSKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEH----LLYG 524 Q ++ + PY + D + + + Y+DET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIYFLAQTAFSGVYDDETIKKWLQTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 599 QQFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|220928628|ref|YP_002505537.1| NAD synthetase [Clostridium cellulolyticum H10] gi|219998956|gb|ACL75557.1| NAD+ synthetase [Clostridium cellulolyticum H10] Length = 642 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 136/643 (21%), Positives = 245/643 (38%), Gaps = 93/643 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V + N + +A A+ QG ++F EL ++ Y DL + + + Sbjct: 6 VRVAAAVPELKVANCDFNAGEIIKAVRTADSQGAQFVVFPELSVTSYTCGDLFLQTTLQK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S+++ + S+T I++G P + N VI+ G+I+ V K +PNYSEF+ Sbjct: 66 GALSSLEVIISETSSLECVIILGMPLTLDSRLYNCAVIIKNGSILGVVPKCYIPNYSEFY 125 Query: 125 EKRTFISGYSNDP--------------------IVFRDIRLGILICEDIWKNSNICKHLK 164 E R F SG P + + G+ ICED+W + Sbjct: 126 EARWFSSGMDRPPETIDMLGKTVPFGIDILFEAVNMDGLCFGMEICEDLWVPIPPSSNQA 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA LF+L+AS K + R E++ Q + +YV+ + +L+F G S Sbjct: 186 LNGATLLFNLSASNDIVGKHEYREELIKLQSAKCSAAYVYVSSGPNESTTDLVFGGHSLI 245 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS--------------------- 261 + L Q + FS M D Q + + Sbjct: 246 CEYGSVL-AQSERFSFDKKMIMSDIDIQRLVNERFKNSAFKHKTNNTVFRKIPFYVKEQK 304 Query: 262 --------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P E +N L ++ +K +IG+SGG+DS L Sbjct: 305 DDKLLRLIDPHPFVPSDPNARNKRCEEIFNIQTSGLGKRLRHTGLNKCVIGISGGLDSTL 364 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V K +N+ + +P TS +L ++ + + + I + Sbjct: 365 ALLVIVKTYDKLGLDRKNIHAVTMPGFGTSSNTLGNSLELMRLMNVTSHRIDIKEACLKH 424 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 425 FEDIGH--DPLNYDVTYENVQARERTQILMDMANKIGGLVIGTGDLSELALGWATYNGDH 482 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------- 475 + + KT V L W + + T + S+L+ S EL P Sbjct: 483 MSMYAVNSGVPKTLVKYLVQWCADYLFDND----TRNVLLSVLDTPISPELLPTDKEGCI 538 Query: 476 HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLY 523 Q ++ + PY + D + +V + + + +Y+ T++ + Sbjct: 539 QQKTEDIVGPYELHDFYLYHMVRYGAEPDKVYKLAERAFEGKYDKATIKKWLETFLKRFF 598 Query: 524 GSEYKRRQAPVGTKITAKSFGR--DRLYPISNK---FRDHISE 561 ++KR P G K+ + S D P + +SE Sbjct: 599 SQQFKRSCLPDGPKVGSISLSPRGDWRMPSDADVGIWLKRLSE 641 >gi|325290954|ref|YP_004267135.1| NH(3)-dependent NAD(+) synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324966355|gb|ADY57134.1| NH(3)-dependent NAD(+) synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 661 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 130/641 (20%), Positives = 247/641 (38%), Gaps = 98/641 (15%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++ A +GD NI + + +A + + +++F EL ++GY DL ++ Sbjct: 7 MGFIRVGTAVPKVQIGDPMKNIEEISKLINQAAEEKVKVLVFPELCVTGYTCGDLFHQRL 66 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + A++ L + + I VG P + N VIL G I+ K +PNY+ Sbjct: 67 LLDKTEEALEKLVNTVIEIDMVIAVGLPILADNQLFNCAVILYKGEILGAVPKTFIPNYN 126 Query: 122 EFHEKRTFISG---------------YSNDPIVFRD----IRLGILICEDIWKNSNICKH 162 EF+EKR F S ++ ++FRD + +G+ +CED+W + + Sbjct: 127 EFYEKRWFSSAINRLSDRVILCGQEVPFHEQLLFRDSSSELCIGVEVCEDLWMTISPSAY 186 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 + GA + +L+AS K + R +V+ Q + +YV+ + +++F G + Sbjct: 187 HAQYGANLILNLSASNEVVGKKEYRDALVSQQSAKCLAAYVYVSAGQSESTTDVVFGGQT 246 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS------------------- 261 + L Q F E + +T D + +S Sbjct: 247 LIAENGSILEEQ--RFQE-SVITFCDIDMEKLMNERRKMNSFMNRPPDLDYTIINFNLGK 303 Query: 262 -----------------ASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 ++P + + + L + K+ K ++G Sbjct: 304 TERTEQETTENCLKRYVDPYPFVPGRREDRDIRCQEIFTIQLTGLAQRLVKSGIKKAVLG 363 Query: 299 LSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS L + +A K +N+ + +P T+ ++ E+A + LG + Sbjct: 364 ISGGLDSTLALLVCKEAFDKLGYPQDNIIGVTMPGFGTTNRTNENAKLLMRELGIDVREI 423 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI + F+ + I EN+Q+R R ILM L+N +++ T + SE+++ Sbjct: 424 PITEACLQHFAAIGH--DPAIQDITYENVQARERTQILMDLANREGGIVVGTGDLSELAL 481 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 G+ T GD + + KT V L SW + IL S EL Sbjct: 482 GWCTYNGDHMSNYAVNAGIPKTLVKYLVSWYADTSQNT----KVTKTLQDILATPISPEL 537 Query: 474 RPH-------QTDQESLPPYPILDDIIKRIVE----NEESFINNDQEYNDE--------T 514 P Q +E + Y + D + ++ ++ F+ + + D+ Sbjct: 538 LPADRTGEIEQKTEEKIGSYDLHDFFLYHMMRWGYSPKKIFLLAELAFQDKFDSSEILRW 597 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++ + ++KR P G K+ + D P Sbjct: 598 LKVFYQRFFSQQFKRSCLPDGPKVGSVCLSPRGDWRMPSDA 638 >gi|225574649|ref|ZP_03783259.1| hypothetical protein RUMHYD_02726 [Blautia hydrogenotrophica DSM 10507] gi|225038141|gb|EEG48387.1| hypothetical protein RUMHYD_02726 [Blautia hydrogenotrophica DSM 10507] Length = 635 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 132/630 (20%), Positives = 245/630 (38%), Gaps = 85/630 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +++ +K+A A + V D N + R E ++G +++F EL I+GY DL ++ Sbjct: 1 MRQGFVKVAAATPDVRVADCRHNGNEIIRLIREMEKEGAKVMVFPELCITGYTCADLFWQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + +++ + + +T D A I VG P + + N + G ++ + KI+LPN Sbjct: 61 ELLVRSAREELVRIVQETSDVDALIFVGLPFEHSGKLYNVAAAVSHGEVLGMVPKIHLPN 120 Query: 120 YSEFHEKRTFISGYSNDPIVFRDI-------------------RLGILICEDIWKNSNIC 160 Y EF+E+R F SG + + + ICED+W S Sbjct: 121 YGEFYEQRNFASGAGVCDLAILNGEEVLFGSELIFACTNMPKLTVAAEICEDLWVTSPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 + GA + +L+AS K R +V GQ + + +Y N G+ +L+F G Sbjct: 181 ANHAAAGANLIVNLSASSEAVGKDSYRKSLVRGQSARLVCGYVYANAGEGESTQDLVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM--------------------- 257 + + L + K F + + +++ S+ M Sbjct: 241 QNLIAEN-GALLAEGKRFQNEIVYGDVDFERISSERRRMTTFESDLGTYQMVPFCLTVEE 299 Query: 258 ---SDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + A ++P E + N + L+ + + + ++G+SGG+DS L Sbjct: 300 TKLTRQFAPNPFVPSNEKDRDDRCDEILNIQAMGLKKRLAHIHGERAVVGISGGLDSTLA 359 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +EN+ + +P T+ ++ +A + LG + I + V F Sbjct: 360 LLVTARTFDLLGLPRENILAVTMPCFGTTDRTYRNACELTRRLGATLQEVDIKEAVRVHF 419 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + Q + EN Q+R R +LM L+N +++ T + SE+++G+ T GD Sbjct: 420 ENIGQ--DPALHDVTYENSQARERTQVLMDLANQCNGLVVGTGDLSELALGWATYNGDHM 477 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQ 477 + + KT V L + L I +L+ S EL P Q Sbjct: 478 SMYGVNASVPKTLVRHLVHYYARTCEDERLSQ----ILLDVLDTPVSPELLPPEDGNISQ 533 Query: 478 TDQESLPPYPILDDIIKRIVENEESFINN------------DQEYNDETVRYVEHLLYGS 525 ++ + PY + D + ++ S DQE + +R + Sbjct: 534 KTEDLVGPYELHDFFLYYMLRVGYSPKKIYRIACRTFEAVYDQETILKWLRKFYWRFFSQ 593 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + + D P Sbjct: 594 QFKRSCLPDGPKVGSVTVSPRGDLRMPSDA 623 >gi|302386868|ref|YP_003822690.1| NAD+ synthetase [Clostridium saccharolyticum WM1] gi|302197496|gb|ADL05067.1| NAD+ synthetase [Clostridium saccharolyticum WM1] Length = 636 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 127/634 (20%), Positives = 240/634 (37%), Gaps = 84/634 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + V D N + +E + L++F EL ++ Y DL + + ++ Sbjct: 6 IRVAAATPDVKVADPEFNRERICEQIKEGIKNHAKLMVFPELCLTAYTCGDLFGQDALLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + +T +G P ++ + N+ V + G I+ + K LPNYSEF+ Sbjct: 66 RAKKELKEILKETKGHDLLCFIGMPWEESGKLYNTAVAVQNGKILGIVPKTCLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R F G +V + + +CED W + Sbjct: 126 ELRYFQPGNEIPVMVKWEEDTVPMGANLLFACEDIPQLVVAAEVCEDAWVPNPPSIRHAI 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R ++TG + + IY N G+ +L+F G + Sbjct: 186 AGATVMANCSASDETTGKDIYRRSLITGHSASLVCGYIYANAGEGESTQDLVFGGQNLIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 + L + F + + ++ + + M+ A Sbjct: 246 EN-GTLLAESSRFGNKTVYGDMDLERLVHERRRMTTFPAADRNHYLVVPFRMKKEELELK 304 Query: 263 ----STMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 ++P E E + + L+ + I+G+SGG+DS L + Sbjct: 305 RLIDPRPFVPDNESERNRRCEEILSIQAMGLKKRLAHTGCKHGIVGISGGLDSTLALLVT 364 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A +E + + +P T+ ++ ++A + LG + + I + V+ F + Sbjct: 365 VRAFDMLKIPREQIHGVTMPCFGTTDRTYQNACTLTRTLGAELTEVNIREAVSLHFRDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 Q +E I EN Q+R R +LM L+N M++ T + SE+++G+ T GD + Sbjct: 425 Q--REGVHDITYENSQARERTQVLMDLANRLNGMVIGTGDMSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + + T G L+ V +L+ S EL P Q ++ Sbjct: 483 VNSSVPKTLVRHLVRY---YADTCGEKDLSGV-LYDVLDTPVSPELLPPKDGEIAQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDE----TVRYVEHLLYGSEYKR 529 + PY + D + +I+ + Y + ++ + ++KR Sbjct: 539 LVGPYELHDFFLYQILRFGFRPEKVYRMAVHAFSGHYGKDEILKWLKVFYRRFFSQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 P G K+ + + D P R + E Sbjct: 599 SCMPDGPKVGSVAVSPRGDLRMPSDAVSRLWLEE 632 >gi|295100992|emb|CBK98537.1| NAD+ synthetase [Faecalibacterium prausnitzii L2-6] Length = 641 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 126/623 (20%), Positives = 238/623 (38%), Gaps = 83/623 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK A + V D N ++ ++A +G+ L +F E ++GY DL +++ Q Sbjct: 6 LKAAALSPSLRVADCNYNASQIVSQLQDAAARGVRLAVFPEFCLTGYTCGDLFLQRTLQQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ T+ + + +VG P + + N +L G ++ + K LPNY EF+ Sbjct: 66 GALDALQTVLDASRELDVVALVGLPLLVRGKLYNCAAVLCGGRLLGLVPKTYLPNYGEFY 125 Query: 125 EKRTFISGYS--------------NDPIVFRD-----IRLGILICEDIWKNSNICKHLKK 165 EKR F G + ++FR LG+ ICED+W Sbjct: 126 EKRQFTPGSTEVENVTVCGQEVPFGTSLLFRCRQMPSFVLGVEICEDLWSALPPSTFHTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R +V+ Q + + +Y + G+ +++F G Sbjct: 186 AGATVIANLSASDETVGKAEYRRALVSNQSARLLCGYLYASAGHGESTQDMVFAGHDLIA 245 Query: 224 DGQQQL-----------------------AFQMKHFS---EQNFMTEWHYDQQLSQWNYM 257 + L + F E ++ ++ + Sbjct: 246 ENGALLAETSPFEGGRAETELDCQRMESERARNTSFEPSAEGYLTVDFDLALTETRLSRR 305 Query: 258 SDDSASTMYIPLQEEEADYNACVL---SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 D + + + + + L ++ + +IG+SGG+DS L AV Sbjct: 306 VDPTPFIPHDERRRTQRCELILKMQADGLAKRLEHAHAKTAVIGISGGLDSCLALLAAVR 365 Query: 315 ALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+ + +V + +P T+ ++ +A L + + I + V+ F + Q Sbjct: 366 AMKQLGRPTGDVLAVTMPCFGTTHRTRSNAEILCDELAVSFTEIDIANTVHSHFRDIGQ- 424 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 E + EN Q+R+R LM +N + +++ T + SE+++G+ T GD + Sbjct: 425 -DESVLDVTFENGQARVRTLELMDTANRTGGLVVGTGDLSELALGWATYNGDHMSMYGVN 483 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQESL 483 + KT V L + ++ L + IL+ S EL P Q ++ + Sbjct: 484 AGVPKTLVRHLVQYEADIAASAEL----RRVLLDILDTPVSPELLPARDGEISQKTEDLV 539 Query: 484 PPYPILDDIIKRIV----------ENEESFINNDQEYNDE----TVRYVEHLLYGSEYKR 529 PY + D + ++ ++ EY DE +R + ++KR Sbjct: 540 GPYELHDFYLYYVLRFGFGPSKIFRLAKAAFAGRAEYPDEVLYKWLRNFYWRFFAQQFKR 599 Query: 530 RQAPVGTKITAKSFGR--DRLYP 550 P G K+ + + D P Sbjct: 600 SCLPDGPKVGSVTLSPRGDWRMP 622 >gi|331086100|ref|ZP_08335183.1| hypothetical protein HMPREF0987_01486 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407023|gb|EGG86528.1| hypothetical protein HMPREF0987_01486 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 637 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 137/631 (21%), Positives = 245/631 (38%), Gaps = 86/631 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K+ +K+A N V D+ N+ + R +E QG +I F EL I+GY DL + Sbjct: 1 MKQGFVKVAAVTPNMRVADVEYNVNEICRMIDETTEQGAKVIAFPELCITGYTCGDLFSQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + ++ + + T + A I VG P + + N+ L+ G ++ + K LPN Sbjct: 61 EILLREAKQGLYRIAEYTKEKDALIFVGVPYEVAGKLYNTAAALNHGKVLGLVTKTFLPN 120 Query: 120 YSEFHEKRTFISGYSN-DPIVFRDIRLGI------------------LICEDIWKNSNIC 160 Y EF+E R F +G + I R+ ICED+W Sbjct: 121 YGEFYEMRQFQAGPQSVQMIETEGHRIPFGPRLLFQAETMKHLVVSAEICEDVWSAVPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 +GA + + +AS K + R ++ GQ + + +Y N G+ +L+F G Sbjct: 181 IEAAVEGATLIVNCSASNEIAGKEEYRRSLIAGQSARLLAGYVYANAGEGESTTDLVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN----YMSDDSASTMYIPL----- 269 + + ++ + K F+ +E + L + + S YIP Sbjct: 241 HNIIAEN-GEILKESKRFTSGAIYSEIDVEMLLGERRKNTTFQRKGEYSIPYIPFEIEKE 299 Query: 270 ----------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++ E + L+ + N + ++G+SGG+DS L Sbjct: 300 ETMLTRKIPMSPFVPENKVTRSRQCEEILMIQAVGLKKRMLHTNCQRAVVGISGGLDSTL 359 Query: 308 CAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + + + + ++ +P T+ ++ ++A K LG +PI + V Sbjct: 360 ALLVTAKSFDLLGIDRSQILSVTMPCFGTTDRTYQNACRLTKKLGATLREIPIQNAVRVH 419 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + Q EE + EN Q+R R ILM L+N + M++ T + SE+++G+ T GD Sbjct: 420 FEDIGQ--SEEEHDVTYENAQARERTQILMDLANKTNGMVIGTGDMSELALGWATYSGDH 477 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 + + KT V+ L + P + + IL+ S EL P Sbjct: 478 MSMYGVNASVPKTLVYHLVRYYAEE----CEDPELKGLLFDILDTPVSPELLPPKDGEIV 533 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDE----TVRYVEHLLYG 524 Q +E++ PY + D + ++ + Y DE ++ + Sbjct: 534 QKTEETVGPYELHDFYLYYVLRFGYEPSKIYRLAKYAFGGIYEDEIILKWLKKFYWRFFS 593 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K S D P Sbjct: 594 QQFKRSCLPDGPKTGTVSLSPRGDWRMPSDA 624 >gi|160881550|ref|YP_001560518.1| NAD+ synthetase [Clostridium phytofermentans ISDg] gi|160430216|gb|ABX43779.1| NAD+ synthetase [Clostridium phytofermentans ISDg] Length = 647 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 129/634 (20%), Positives = 242/634 (38%), Gaps = 92/634 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A N V D N+ + EEA ++G +I+ EL I+GY EDL + + + Sbjct: 6 VKVAAITPNIKVADCEYNVNEIIHQIEEAKQKGAKVIVCPELCITGYTCEDLFLQNTLLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ L + D A I VG P + N V+L G ++ + K N+PNYSEF+ Sbjct: 66 GALDGLNKLIDYSKDIDALIAVGLPFLKDGKLFNVAVVLYQGELLGMVPKRNIPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKK 165 E R F +G V +++GI ICED+W L + Sbjct: 126 EARYFGNGNDIVEHVTINHKKVPFGSNLIFCHREIPYLKVGIEICEDLWVPQPPSGGLCQ 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R +V+ Q + + +Y + G+ +L+F G + Sbjct: 186 AGATVILNLSASNETTGKDIYRKTLVSNQSARLVCGYLYSSAGEGESTTDLVFSGHNMIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM-------------------------- 257 + + + + F ++E ++ +S+ + Sbjct: 246 EN-GTVIAESERFVNGVIVSEVDLEKIISERRRISTYLVEEKKDYTYLEYGEYATENNSN 304 Query: 258 -------------SDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 S + + + + L L+ +Q V++G+SGG+D Sbjct: 305 YDTTLSLTRFIDKSPFVPTKKEEREKRCDEIIHMQALGLKKRLQHTGSKSVVLGISGGLD 364 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S L + A + + + +P T+ ++ ++A + L + I++ V Sbjct: 365 STLALLVTRRAFDMLELDPKGIVAVTMPCFGTTDRTYQNAILLVQELSATLREIRINEAV 424 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + + + + EN Q+R R +LM ++N ++ T + SE+++G+ T Sbjct: 425 ELHFRDIGHDINK--HDVTFENGQARERTQVLMDIANQVNGFVVGTGDMSELALGWATYN 482 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH--- 476 GD + + KT V L S+ + L + +L+ S EL P Sbjct: 483 GDHMSMYGVNSSVPKTLVRYLVSYFAEEAKSDTL----RNVLKDVLDTPVSPELLPPKDG 538 Query: 477 ---QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHL 521 Q ++ + PY + D + ++ + +Y ET+ Sbjct: 539 EIVQKTEDVVGPYELHDFFLYYVLRFGFTPSKIYRLAVYAFKDDYTKETIYRWLTIFYRR 598 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + +YKR P G K+ + + D P Sbjct: 599 YFQQQYKRSCLPDGPKVGSVAVSPRGDLRMPSDA 632 >gi|225568608|ref|ZP_03777633.1| hypothetical protein CLOHYLEM_04685 [Clostridium hylemonae DSM 15053] gi|225162536|gb|EEG75155.1| hypothetical protein CLOHYLEM_04685 [Clostridium hylemonae DSM 15053] Length = 640 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 127/631 (20%), Positives = 240/631 (38%), Gaps = 86/631 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +++ +K+A A + V D+A N + R EE +G +I+F EL ++GY DL + Sbjct: 1 MRQGFVKVAAATPDIRVADVAYNTEQICRLIEETADEGAKIIVFPELCVTGYTCGDLFTQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + SA+ + D A + VG P + N L+ G ++ + K LPN Sbjct: 61 DILLTDARSALHRIAGFAKDKDALVFVGLPLSVDGELYNVAAALNRGAVLGLTTKTFLPN 120 Query: 120 YSEFHEKRTFISGY-SNDPIVFRDIRLGI------------------LICEDIWKNSNIC 160 Y EF+E R F G I+F + ICED+W Sbjct: 121 YGEFYEMRQFRQGPKEAREILFDGQVIPFGPQLLFESTVMDSLVVSAEICEDVWSPVPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 ++GA + + +AS K R ++ GQ + + +Y N G+ +L+F G Sbjct: 181 IEAAREGATIIVNCSASDETVGKESYRKSLIEGQSARLISGYVYANAGEGESTTDLVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN----------------------- 255 + + L + F +E ++ + Sbjct: 241 HNIIAENGTVLR-SGRRFENGVICSEIDVNRIAGERRKNTTFQTSGERKLFRIPFYIEET 299 Query: 256 --YMSDDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++ S ++P + E + L+ + ++G+SGG+DS L Sbjct: 300 DTVLTRTFPSRPFVPGAGEERARRCEEILTIQAMGLKKRLAHARCSSAVVGISGGLDSTL 359 Query: 308 CAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + A ++ + + +P T+ ++ ++A ++ LG +PI D V+ Sbjct: 360 ALLVTAKAFDALQLSRKGITAVTMPCFGTTDRTYQNACRMSQKLGAVLREVPIADSVSLH 419 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + E + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 420 FKDIGH--DPEDHSVTFENAQARERTQVLMDIANQTGGLVIGTGDMSELALGWATYNGDH 477 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------H 476 + + KT V L + L I +L+ S EL P Sbjct: 478 MSMYGVNASVPKTLVRHLVHYYADTCGDEELKA----ILYDVLDTPVSPELLPPKDGEIA 533 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYND----ETVRYVEHLLYG 524 Q ++ + PY + D + ++ + + + EY++ + + +G Sbjct: 534 QKTEDLVGPYELHDFFLYYMIRFGYEPSKIYRIARLAFEGEYDNITILKWLETFYRRFFG 593 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + D P Sbjct: 594 QQFKRSCLPDGPKVGTVALSPRGDWRMPSDA 624 >gi|331090662|ref|ZP_08339511.1| hypothetical protein HMPREF9477_00154 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400076|gb|EGG79727.1| hypothetical protein HMPREF9477_00154 [Lachnospiraceae bacterium 2_1_46FAA] Length = 637 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 137/632 (21%), Positives = 244/632 (38%), Gaps = 87/632 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K+ +K+A A + V DI+ N + + +E G +++F EL ++GY DL F+ Sbjct: 1 MKQGFVKVAAATPDIRVADISYNTEQICKLIDETVANGAKIVVFPELCVTGYTCGDLFFQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 ++ A++ + T D A + VG P + N L+ G II + K LPN Sbjct: 61 DILLERSKEALNEIAEYTKDKDALVFVGVPLAINGKLYNVAAALNRGKIIGLVTKTFLPN 120 Query: 120 YSEFHEKRTFISGY-SNDPIVFRDIRLGI------------------LICEDIWKNSNIC 160 YSEF+E RTF +G I++ ++ ICED+W Sbjct: 121 YSEFYEMRTFQAGPEEARVILYEGEQVAFGPQILFKAKNMEELIVSAEICEDVWSPIPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 GA L + +AS + K R +++GQ + + +Y N G+ +L+F G Sbjct: 181 IMAATAGATILVNCSASSETYGKDGYRTSLISGQSARMIAGYVYANAGAGESTTDLVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM--------------------- 257 + + + + + + +E + L++ Sbjct: 241 HNIIAEN-GMVLKESRRYMNDVIYSEIDVHRLLNERRKNTTFQQMSGKHFLVTVPFEIEK 299 Query: 258 -----SDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + + +IP E E L L+ +Q N V+IG+SGG+DS Sbjct: 300 EETELTRSISQMPFIPEDEKERDECCEEILMIQALGLKKRLQHTNCRNVVIGVSGGLDST 359 Query: 307 LCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L +AV ++N+ + +P T+ ++ ++A + LG + I + V + Sbjct: 360 LALLVAVKTFDMLGIDRKNITAVTMPCFGTTDRTYQNACVLIEKLGVTLREISIQEAVRN 419 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + Q +E+ EN Q+R R +LM ++N M++ T + SE+++G+ T GD Sbjct: 420 HFKDIGQ--REDLFDTTYENAQARERTQVLMDIANMENGMVIGTGDMSELALGWATYNGD 477 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH----- 476 + + KT V + L IL+ S EL P Sbjct: 478 HMSMYGVNSSIPKTFVRFIVKHCAVECEDETLKKA----LFDILDTPISPELLPAKEGEI 533 Query: 477 -QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLY 523 Q ++ + PY + D + ++ + Y DET+ + Sbjct: 534 EQKTEDLVGPYELHDFYLYYMLRYGYEPSKIYRLARKAFAGVYEDETILKWLKSFCRRFF 593 Query: 524 GSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ D P Sbjct: 594 TQQFKRSCLPDGPKVGTVGLSPRGDLRMPSDA 625 >gi|294646816|ref|ZP_06724437.1| NAD+ synthetase [Bacteroides ovatus SD CC 2a] gi|292637761|gb|EFF56158.1| NAD+ synthetase [Bacteroides ovatus SD CC 2a] Length = 626 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 129/620 (20%), Positives = 242/620 (39%), Gaps = 87/620 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D N+ K A +G+ +I+F E+ I+GY DL ++ ++ Sbjct: 6 VKVAAAVPHVKVADCKFNVEKIESLITVAEGKGVQIIIFPEMSITGYTCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++T +VG P V+N+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLMQILNNTRQLDIISIVGMPVVVNSTVINAAVVIQKGKVLGVAAKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S D GI ICED+W L QG Sbjct: 126 EQRWFTSALQLTTNNVRLCGQIVPIGANLLFETSDTTFGIEICEDLWSTIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+++A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNMSADNEGIGKNNYLCSLISQQSARCIAGYVFSSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 L + + FS EQ ++E ++ ++ + +A Sbjct: 246 -GSLLARSERFSMKEQLIISEIDVERIRAERRINTTFAANQANLGDKKAVSIATEFVNSK 304 Query: 263 ---------STMYIPL-----QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++P + E ++ V L + ++G+SGG+DS L Sbjct: 305 ELTLTRKFNAHPFVPQGIELNEHCEEVFSIQVAGLAQRLVHTGAKTAVVGISGGLDSTLA 364 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V K + + I +P T+ ++ +A K+LG + I D F Sbjct: 365 LLVCVKTFDKLGLSRKGILGITMPGFGTTDRTYHNAIDLMKSLGISIREISIKDACIQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 KDIEHDVN--VHDVTYENSQARERTQILMDVANQTWGMVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W + G+ ++ I++ S EL P Sbjct: 483 SMYGVNASVPKTLVKYLVQWVAEN----GMDENSKATLLDIVDTPISPELIPADENGEIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + Y++ET++ + Sbjct: 539 QKTEDLVGPYELHDFFLYYFLRFGFRPSKIFYLARTTFKDTYDEETIKKWLSTFFRRFFN 598 Query: 525 SEYKRRQAPVGTKITAKSFG 544 ++KR P G K+ + S Sbjct: 599 QQFKRSCLPDGPKVGSISIS 618 >gi|291548285|emb|CBL21393.1| NAD+ synthetase [Ruminococcus sp. SR1/5] Length = 649 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 135/649 (20%), Positives = 255/649 (39%), Gaps = 100/649 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + +A E ++ + L++F E I+GY DL ++ + Sbjct: 6 IKVAAATPRVTVADCKANGEEILKAIHEMEKEHVKLMVFPEFCITGYTCHDLFLQRCLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + +T + A I VG P + + + N L+ G I+ K ++PNY+EF+ Sbjct: 66 SAWDELLHIAEETRETDALIFVGLPLRHRGKLYNVAAALNHGRIVGFVPKTHIPNYNEFY 125 Query: 125 EKRTFISGYSNDPIVFRD-------------------------------IRLGILICEDI 153 E+R F +G + + F D + +CED+ Sbjct: 126 EQRQF-AGAEEEDVEFVDFLKCEKNEEDEFWDEIPFGTELIFECKEFPEFTVAAELCEDL 184 Query: 154 WKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD- 212 W + GA + +L+AS K R +++GQ + + IY + G+ Sbjct: 185 WVPAPPSIRHAVNGAHIIVNLSASDEMVGKDSYRRTLISGQSARLICGYIYASAGEGEST 244 Query: 213 -ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------- 262 +L+F G + + L + + F +E + + MS A Sbjct: 245 QDLVFGGQNMIAENGSML-AESRRFENGIIYSEIDVQRLADERRRMSTYPAVSTCSHTRV 303 Query: 263 ----------------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 ++P + E N + L+ ++ + ++GLS Sbjct: 304 DFSVAEEKTRLTRKYPQYPFVPSVKEERDERCEEILNIQAMGLKKRMEHIHSRSAVVGLS 363 Query: 301 GGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L + A + +E + + +P T+ ++ ++A ++ LG + + I Sbjct: 364 GGLDSTLALLVMARAFDRMGMPREQIHCVTMPCFGTTDRTYQNACKLSRCLGARLTEVNI 423 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + VN F + E + EN Q+R R ILM +N +L+ T + SE+++G+ Sbjct: 424 KEAVNIHFRDIGH--DPEIHDVTYENSQARERTQILMDTANKEGGVLVGTGDLSELALGW 481 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD + + KT V L + + T G L EV+ IL+ S EL P Sbjct: 482 ATYNGDHMSMYGVNASVPKTLVRHLVRY---YADTCGDEELKEVLL-DILDTPVSPELLP 537 Query: 476 ------HQTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETV----RY 517 Q ++ + PY + D + ++ + + D Y+ ET+ + Sbjct: 538 PKDGKIAQKTEDLVGPYELHDFYLYYMLRAGFTPDKIYRLACLTFDGIYDKETILKWLKT 597 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNK---FRDHISE 561 + ++KR P G K+ + + D P ++D + + Sbjct: 598 FYRRFFAQQFKRSCLPDGPKVGSVALSPRGDLRMPSDASARIWQDVLEK 646 >gi|120609669|ref|YP_969347.1| NH(3)-dependent NAD(+) synthetase [Acidovorax citrulli AAC00-1] gi|120588133|gb|ABM31573.1| NH(3)-dependent NAD(+) synthetase [Acidovorax citrulli AAC00-1] Length = 566 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 210/577 (36%), Positives = 314/577 (54%), Gaps = 39/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I +AQLN VGDI GN+ + A +A + G DL++FTEL + GY P D++ + F++ Sbjct: 2 LRITLAQLNLTVGDIEGNVQRMTDAARQAAQAGADLVVFTELALCGYYPGDMLEESGFME 61 Query: 65 ACSSAIDTLKSDTH-DGGAGIVVGFPRQDQE---GVLNSVVILDAGNIIAVRDKINLPNY 120 + I L+ + G VVG P + Q + NS+++L G I K LP Y Sbjct: 62 RVDAGIAALQDASRATPGLHWVVGTPTRAQGPGKRLHNSLLVLRDGAIRLTYAKQLLPTY 121 Query: 121 SEFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G + ++G L+CED W ++ N + L + + S Sbjct: 122 NIFDERRHFEPGPDVARVLRIGHAQIGFLVCEDGWNDAVADYATNPFQRLADAAPDLVVS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + K + RH++ LP++YVNQVGGQD++++DGASF + + + F+ Sbjct: 182 INASPSHIGKREVRHQVFGDAARRHGLPVVYVNQVGGQDQIVYDGASFAAEPEAGVVFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKN 290 F+E L + S D +P + VL LRDY ++ Sbjct: 242 PRFAEDVRTL------CLEGGRFRSADGGPLPPVPREGLPTMDFYRQQIVLGLRDYARRC 295 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++G SGGIDSAL A+A +A+G ENV + +P +++S S++D+ A + LG + Sbjct: 296 GFGQVVVGSSGGIDSALTLALAAEAMGAENVIAVTMPSRFSSSGSVDDSVALCRNLGIRL 355 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 PI DLV + + + G+ EN+Q+RIRG ILM SN +LLTT NKSE Sbjct: 356 HTHPIADLVAGYAAQFEASFGQSLEGLPLENLQARIRGTILMEYSNAFGHLLLTTGNKSE 415 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ISVGY TLYGD +GG L DLYKT+VF+L+ N+H E+IP +I+EK PS Sbjct: 416 ISVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHVNAHAGR-------ELIPQAIIEKEPS 468 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYN---------DETVRYV 518 AEL P Q D +SLPPYP+LD ++K ++E E + + +++ V V Sbjct: 469 AELAPGQRDVDSLPPYPVLDQVLKLLIEGEGLSHAEYADARDFAARLQHDEAGRALVHRV 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ +EYKRRQAP ++ AK+FG R PI+ K+ Sbjct: 529 RRMIARNEYKRRQAPPILRVRAKAFGNGRQMPIAAKY 565 >gi|331270057|ref|YP_004396549.1| NAD+ synthetase [Clostridium botulinum BKT015925] gi|329126607|gb|AEB76552.1| NAD+ synthetase [Clostridium botulinum BKT015925] Length = 638 Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 142/636 (22%), Positives = 242/636 (38%), Gaps = 88/636 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++A A VGDI NI ++ + ++ LI+ EL I+GY DL ++ Sbjct: 1 MNFIRVASACPVVNVGDIKFNIENIKKCINLSIKENSKLIVLPELSITGYTCADLFLNQT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ I + + + + I VG P + N I+ G I+ + K LPNYS Sbjct: 61 LIEESIEGIKDICNFSLNKDILISVGAPLLYNYCLYNCAYIIYNGKILGIVPKSYLPNYS 120 Query: 122 EFHEKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F GY+ N + G ICED+W +L Sbjct: 121 EFYEKRWFTEGYNLIDKKVDLSFQKNIPFGINLIFSSGTFKFGFEICEDLWTVIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R IV+ Q + +Y + + +++F G Sbjct: 181 ALMGANIIGNLSASNELVSKADYRTSIVSSQSARCMCSYVYASSGVFESTTDVVFSGHLI 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQL 251 + + L + E +T E ++ Sbjct: 241 ISENGRILRENDRFQRENQIITSIIDVDKLNNMRIKNLSFRDSKRTCPFAPFEIVFEFNN 300 Query: 252 SQWNYMSDDSASTMYIPLQEEEA------DYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + + ++P E E +N L + KVI+G+SGG+DS Sbjct: 301 TNIDVFDRPIHKHPFVPANEHEREIRSKEIFNIQSSGLAKRLNHTRLEKVIVGISGGLDS 360 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L +AV+ ++N+ TI +P T+ ++ +A K LG + + I + Sbjct: 361 TLALLVAVNTFDLLKIPRKNIITITMPGFGTTDRTYNNAVDLCKKLGTDFREINIVNSCL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + E I EN+Q+R R ILM L+N A+L+ T + SEI++G+ T G Sbjct: 421 QHFKDIGHPA--EIHDITYENVQARERTQILMDLANKEGALLIGTGDLSEIALGWATYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + H + I IL S EL P Sbjct: 479 DHMSMYSVNCSIPKTLVRYLVQFAAEHESEDNISE----ILIDILNTPVSPELLPKDKDG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYV----EHL 521 Q ++ + PY + D + + + +Y+++T++ Sbjct: 535 KIAQKTEDIVGPYELHDFFLYYFIRQNATPEKILLLAKKAFKNDYDEDTIKKWLDKFIRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 + ++KR P G K+ S D P + Sbjct: 595 FFTQQFKRSAIPDGPKVGTISLSPRGDLKMPSDASY 630 >gi|325662301|ref|ZP_08150910.1| hypothetical protein HMPREF0490_01649 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471303|gb|EGC74526.1| hypothetical protein HMPREF0490_01649 [Lachnospiraceae bacterium 4_1_37FAA] Length = 637 Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 137/631 (21%), Positives = 243/631 (38%), Gaps = 86/631 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K+ +K+A N V D+ N+ + R +E QG +I F EL I+GY DL + Sbjct: 1 MKQGFVKVAAVTPNMRVADVEYNVNEICRMIDETTEQGAKVIAFPELCITGYTCGDLFSQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + ++ + + T + A I VG P + + N+ L+ G ++ + K LPN Sbjct: 61 EILLREAKQGLYRIAEYTKEKDALIFVGVPYEVAGKLYNTAAALNHGKVLGLVTKTFLPN 120 Query: 120 YSEFHEKRTFISGYSN-DPIVFRDIRLGI------------------LICEDIWKNSNIC 160 Y EF+E R F +G + I R+ ICED+W Sbjct: 121 YGEFYEMRQFQAGPQSVQMIETEGHRIPFGPRLLFQAETMKHLVVSAEICEDVWSAVPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 +GA + + +AS K + R ++ GQ + + +Y N G+ +L+F G Sbjct: 181 IEAAVEGATLIVNCSASNEIAGKEEYRRSLIAGQSARLLAGYVYANAGEGESTTDLVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN----YMSDDSASTMYIPL----- 269 + + L + K F+ +E + L + + S YIP Sbjct: 241 HNIIAENGAILK-ESKRFTSGAIYSEIDVEMLLGERRKNTTFQRKGEYSIPYIPFEIEKE 299 Query: 270 ----------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++ E + L+ + N + ++G+SGG+DS L Sbjct: 300 ETMLTRKIPMSPFVPENKVTRSRQCEEILMIQAVGLKKRMLHTNCQRAVVGISGGLDSTL 359 Query: 308 CAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + + + ++ +P T+ ++ ++A + LG +PI + V Sbjct: 360 ALLVTAKTFDLLGIDRSQILSVTMPCFGTTDRTYQNACRLTEKLGATLREIPIQNAVRVH 419 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + Q EE + EN Q+R R ILM L+N + M++ T + SE+++G+ T GD Sbjct: 420 FEDIGQ--SEEEHDVTYENAQARERTQILMDLANKTNGMVIGTGDMSELALGWATYSGDH 477 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 + + KT V+ L + P + + IL+ S EL P Sbjct: 478 MSMYGVNASVPKTLVYHLVRYYAEE----CEDPELKGLLFDILDTPVSPELLPPKDGEIV 533 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDE----TVRYVEHLLYG 524 Q +E++ PY + D + ++ + Y DE ++ + Sbjct: 534 QKTEETVGPYELHDFYLYYVLRFGYEPSKIYRLAKYAFGGIYEDEIILKWLKKFYWRFFS 593 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K S D P Sbjct: 594 QQFKRSCLPDGPKTGTVSLSPRGDWRMPSDA 624 >gi|281417044|ref|ZP_06248064.1| NAD+ synthetase [Clostridium thermocellum JW20] gi|281408446|gb|EFB38704.1| NAD+ synthetase [Clostridium thermocellum JW20] Length = 645 Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 127/637 (19%), Positives = 238/637 (37%), Gaps = 91/637 (14%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K ++ A VG N + + + G+ +++F EL I+GY DL + Sbjct: 1 MKNGFFRVGAAVPRLKVGGCRYNSDQIIGLIGKGEKAGIQILVFPELSITGYTCGDLFHQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 ++ + + + +T + ++G P + N V + G I+ V K +PN Sbjct: 61 ETLLDDAKVQLGRILEETKNSSCISLIGMPLGIDNQLFNCAVAIQKGRILGVVPKTYVPN 120 Query: 120 YSEFHEKRTFISGYS---------------NDPIVFRDIR----LGILICEDIWKNSNIC 160 YSEF+E+R F SG + D ++F D + GI ICED+W Sbjct: 121 YSEFYEQRWFSSGRNALRDTIMLCGQEVPFGDDLLFEDEKGEMCFGIEICEDLWVPVPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 GA +F+L+AS K + R E+ Q + +Y + + +++F G Sbjct: 181 SFQAMAGALVIFNLSASNEIVGKYEYRKELARQQSARCIAGYVYTSSGVDESTTDVVFGG 240 Query: 219 ASFCFDGQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDS---------------- 261 + F+ L + EQ +E + ++ + Sbjct: 241 HAMIFENGSLLCESERFLIDEQLIFSEIDIQKLMNDRRKNTSFMELWRDNVREFRKVKFE 300 Query: 262 -------------ASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++P + + +L ++ + +IG+SGG Sbjct: 301 IEEFEAENITRYVPPHPFVPSDGSSRDRRCSEIFAIQTSALAKRIRHTGLKRAVIGISGG 360 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS L + A ++N+ I +P TS + +A K++ + + I D Sbjct: 361 LDSTLALLVTAKAFDLLNIPRKNILAITMPGFGTSDVTYTNAMEFMKSMDVEIREINIKD 420 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F + I EN+Q+R R ILM ++N +++ T + SE+++G+ T Sbjct: 421 ACLQHFKDIGH--DPSIHDITYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCT 478 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-- 475 GD + + KT V L W + L + + IL+ S EL P Sbjct: 479 YNGDHMSMYAVNASIPKTLVSFLVRWVADN----MLESKAKEVLYRILDTPISPELLPPD 534 Query: 476 -----HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE--- 519 +Q ++ + PY + D + ++ + + +Y D+T++ Sbjct: 535 AKGEINQKTEDIIGPYELHDFFLYHMLRYGAAPGKILILAKKAFEGKYTDDTIKKWLKVF 594 Query: 520 -HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ S D P Sbjct: 595 VKRFFSQQFKRSCLPDGPKVGTISLSPRGDWRMPSDA 631 >gi|326201138|ref|ZP_08191010.1| NAD+ synthetase [Clostridium papyrosolvens DSM 2782] gi|325988706|gb|EGD49530.1| NAD+ synthetase [Clostridium papyrosolvens DSM 2782] Length = 642 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 127/631 (20%), Positives = 240/631 (38%), Gaps = 88/631 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A V + N + +A A +G ++F EL ++ Y DL + + + Sbjct: 6 VRVAAIVPELKVANCDFNAGEIIKAVRTAENEGAQFVVFPELAVTSYTCGDLFLQTTLQK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S+++ + S+T I+VG P + N V++ G+I+ V K +PNYSEF+ Sbjct: 66 RALSSLEVIISETAHMECVIIVGMPLTLDSRLYNCAVVIKNGSILGVVPKCYIPNYSEFY 125 Query: 125 EKRTFISGYS---------NDPIVF-----------RDIRLGILICEDIWKNSNICKHLK 164 E R F SG + F + GI ICED+W + Sbjct: 126 EARWFSSGLDKPAETVNILGKTVPFGIDLLFEAANMEGLCFGIEICEDLWVPIPPSSNQA 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA LF+L+AS K + R E++ Q + +Y + + +L+F G S Sbjct: 186 LNGATLLFNLSASNDIVGKHEYREELIKMQSAKCAAAYVYASSGPNESTTDLVFGGHSLI 245 Query: 223 FDGQQQLAFQMKH-FSEQNFMTEWHY------------------------------DQQL 251 + LA + F E+ +++ + + Sbjct: 246 SEYGSVLARTERFSFDEKMIISDIDIQRLVNERFKNSAFKHNTNDMVFRKVLFCVAEHKT 305 Query: 252 SQWNYMSDDSASTMYIPLQEEEAD---YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + D P + +N L ++ +K +IG+SGG+DS L Sbjct: 306 GKLQRWIDPHPFVPSDPNARNKRCEEIFNIQTSGLGKRLKHTGLNKCVIGISGGLDSTLA 365 Query: 309 AAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V + +N+ + +P TS +L ++ + + + I + F Sbjct: 366 LLVIVKTYDRLGLDRKNIHAVTMPGFGTSSNTLGNSLELMRLMNVTTHRIDIKEACLKHF 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 426 EDIGH--DPLKYDVTYENVQARERTQILMDMANKIGGLVIGTGDLSELALGWATYNGDHM 483 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------H 476 + + KT V L W + + + + S+L+ S EL P Sbjct: 484 SMYAVNSGVPKTLVKYLVQWCADYLFNNDI----RNVLLSVLDTPISPELLPTDKEGCIQ 539 Query: 477 QTDQESLPPYPILDDIIKRIV----ENEESFINNDQEYN--------DETVRYVEHLLYG 524 Q ++ + PY + D + +V E ++ + +Q ++ + + + Sbjct: 540 QKTEDIVGPYELHDFYLYHLVRYGAEPDKIYKLAEQAFSGKYENATIKKWLETFLRRFFS 599 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QQFKRSCLPDGPKVGSISLSPRGDWRMPSDA 630 >gi|238923736|ref|YP_002937252.1| NAD synthetase [Eubacterium rectale ATCC 33656] gi|238875411|gb|ACR75118.1| NAD synthetase [Eubacterium rectale ATCC 33656] Length = 635 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 127/625 (20%), Positives = 244/625 (39%), Gaps = 83/625 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + +E G +++F EL I+GY +DL ++ I Sbjct: 6 IKVAAATPKVKVADTVYNGQLIKALMKECTDNGAKVVVFPELCITGYTCQDLFWQDKLIA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + + +G P + + N ++ G ++A+ K LPNY+EF+ Sbjct: 66 AAEDELIGIADYSRSLDGIFFIGLPYEINGMLYNMAAVVSRGEVLAMVPKTFLPNYNEFY 125 Query: 125 EKRTFISGYSNDPIVF--------------------RDIRLGILICEDIWKNSNICKHLK 164 E R F SG + V +++ + +CED+W + Sbjct: 126 EARHFASGENLSTYVTLKNGQQVSVDTDFIFSCKQLPKLKIAVELCEDLWTPNPPSIRHA 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K R E+V+GQ + + IY + G+ ++++ G + Sbjct: 186 MSGATVIVNLSASDEVTGKAIYRRELVSGQSARLICGYIYASAGDGESTQDVVYSGHNLI 245 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------ 258 + + + F+ + +E+ ++ ++ M+ Sbjct: 246 CEN-GNVLAESGRFTNETIYSEFDVERIETERRRMTTFVVEDDHRWAEFDLEVKDTTLSR 304 Query: 259 -----DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 + + + + L+ ++ N +IG+SGG+DS L + V Sbjct: 305 YVNPAPFVPADKTDRDRRCDEILMIQAMGLKKRLEHTNCKTAVIGISGGLDSTLALLVTV 364 Query: 314 DAL---GKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A GK++ + + +P T+ ++ ++A K LG + + I D VN F + Q Sbjct: 365 RAFDLLGKDHKDIAAVTMPGFGTTDRTYDNAVNLIKCLGATFIEVDIKDAVNIHFRDIGQ 424 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + EN Q+R R ILM ++N M++ T + SE+++G+ T GD + Sbjct: 425 --DPSVHDVTYENGQARERTQILMDIANKENGMVIGTGDLSELALGWATYNGDHMSMYAV 482 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQES 482 + KT V L + + L E +L+ S EL P Q ++ Sbjct: 483 NASVPKTLVRHLVKYYA----DTCGSDLLESTLLDVLDTPVSPELLPPENGKISQKTEDL 538 Query: 483 LPPYPILDDIIKRIVE--------NEESFINNDQEYNDE----TVRYVEHLLYGSEYKRR 530 + PY + D + ++ + I + +Y+DE ++ + ++KR Sbjct: 539 VGPYELHDFFLYNMLRCGYAPAKVYRLARIAFEGKYDDEFILKWLKNFYRRFFAQQFKRS 598 Query: 531 QAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + D P Sbjct: 599 CLPDGPKVGTVAVSPRGDLRMPSDA 623 >gi|325280766|ref|YP_004253308.1| NAD+ synthetase [Odoribacter splanchnicus DSM 20712] gi|324312575|gb|ADY33128.1| NAD+ synthetase [Odoribacter splanchnicus DSM 20712] Length = 522 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 184/549 (33%), Positives = 296/549 (53%), Gaps = 31/549 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + IAI QLN GDI GN K A ++A Q +LILF EL +SG P+DL+ ++ F+ Sbjct: 1 MIIAIPQLNYKAGDIQGNSEKIISAIQKAQNQKAELILFPELAVSGALPQDLLEREEFVN 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQD--QEGVLNSVVILDAGNIIAVRDKINLPNYSE 122 AC AI+ + + +VG P D + NS + G ++ K L +Y Sbjct: 61 ACRMAIEKIAATCTH--IAAIVGAPNLDSENGIMYNSAYFIQHGEVVDGVHKNILSDYDI 118 Query: 123 FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 F E R FI+G N PI +++ + IL D +++ I K F+ + +P+ + Sbjct: 119 FSESRYFIAGEDNTPIRYKNQNIRILF--DEYESEYIDKTDS-----FVIFIGMTPFTVD 171 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 +++ +++ + +I VN VG ++FDG S ++ + + A Q+ F+E + Sbjct: 172 SSREKRKVLATLAQKYNKNLIAVNHVGSYTSVLFDGNSMVYNYKGKKACQLNEFAEDFQL 231 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + + + + +S D + ++ A V +RDY +KN F K I+GLSGG Sbjct: 232 IDTNKLGTPTLQSPVSQDRIALLH----------KALVFGIRDYFEKNGFQKAILGLSGG 281 Query: 303 IDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 IDSA+ AA+A +ALG +NV +++P Y++ S++DA A A+ +G ++ + I + + Sbjct: 282 IDSAVVAALAAEALGAQNVMGLLMPSCYSTEHSVQDALALAENIGMPHETIAIKAIYEQY 341 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 + +++P + EN+Q+R RG ++MA+SN + L TSNKSE +VGYGTLYGD+ Sbjct: 342 LEALHPLFKDQPFNVAEENLQARTRGMLVMAMSNKYGYIPLNTSNKSEAAVGYGTLYGDL 401 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQES 482 G + D++KT ++ LA + N + I +IP + ++K+PSAELRP+Q DQ+S Sbjct: 402 CGSLGTIGDVFKTDIYALARYINRNQI---------IIPENTIQKAPSAELRPNQKDQDS 452 Query: 483 LPPYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAK 541 LP Y LD I+K +E S Y TV V ++ +EYKR Q P KI+ K Sbjct: 453 LPDYNELDGILKLYLEENHSPEMIIKAGYPKATVEKVIQMVKRNEYKRAQCPPIIKISKK 512 Query: 542 SFGRDRLYP 550 +FG R YP Sbjct: 513 AFGYGRKYP 521 >gi|125972846|ref|YP_001036756.1| NAD synthetase [Clostridium thermocellum ATCC 27405] gi|125713071|gb|ABN51563.1| NH(3)-dependent NAD(+) synthetase [Clostridium thermocellum ATCC 27405] Length = 645 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 127/637 (19%), Positives = 238/637 (37%), Gaps = 91/637 (14%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K ++ A VG N + + + G+ +++F EL I+GY DL + Sbjct: 1 MKNGFFRVGAAVPRLKVGGCRYNSDQIIGLIGKGEKAGIQILVFPELSITGYTCGDLFHQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 ++ + + + +T + ++G P + N V + G I+ V K +PN Sbjct: 61 ETLLDDAKVQLGRILEETKNSSCISLIGMPLGIDNQLFNCAVAIQKGRILGVVPKTYVPN 120 Query: 120 YSEFHEKRTFISGYS---------------NDPIVFRDIR----LGILICEDIWKNSNIC 160 YSEF+E+R F SG + D ++F D + GI ICED+W Sbjct: 121 YSEFYEQRWFSSGRNALRDTIMLCGQEVPFGDDLLFEDEKGEMCFGIEICEDLWVPVPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 GA +F+L+AS K + R E+ Q + +Y + + +++F G Sbjct: 181 SFQAMAGALVIFNLSASNEIVGKYEYRKELARQQSARCIAGYVYTSSGVDESTTDVVFGG 240 Query: 219 ASFCFDGQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDS---------------- 261 + F+ L + EQ +E + ++ + Sbjct: 241 HAMIFENGSLLCESERFLIDEQLIFSEIDIQKLMNDRRKNTSFMELWRDNVREFRKVKFE 300 Query: 262 -------------ASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++P + + +L ++ + +IG+SGG Sbjct: 301 IEEFEAENITRYVPPHPFVPSDGSSRDRRCSEIFAIQTSALAKRIRHTGLKRAVIGISGG 360 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS L + A ++N+ I +P TS + +A K++ + + I D Sbjct: 361 LDSTLALLVTAKAFDLLNIPRKNILAITMPGFGTSDVTYTNAMEFMKSMDVEIREINIKD 420 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F + I EN+Q+R R ILM ++N +++ T + SE+++G+ T Sbjct: 421 ACLQHFKDIGH--DPSIHDITYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCT 478 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-- 475 GD + + KT V L W + L + + IL+ S EL P Sbjct: 479 YNGDHMSMYAVNASIPKTLVSFLVRWVADN----MLESKAKDVLYRILDTPISPELLPPD 534 Query: 476 -----HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE--- 519 +Q ++ + PY + D + ++ + + +Y D+T++ Sbjct: 535 AKGEINQKTEDIIGPYELHDFFLYHMLRYGAAPGKILILAKKAFEGKYTDDTIKKWLKVF 594 Query: 520 -HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ S D P Sbjct: 595 VKRFFSQQFKRSCLPDGPKVGTISLSPRGDWRMPSDA 631 >gi|217966619|ref|YP_002352125.1| NAD+ synthetase [Dictyoglomus turgidum DSM 6724] gi|217335718|gb|ACK41511.1| NAD+ synthetase [Dictyoglomus turgidum DSM 6724] Length = 526 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 192/554 (34%), Positives = 298/554 (53%), Gaps = 34/554 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI IAQ+NP++GDI GN K + A +A D+++F+EL + GYPP DL+ Sbjct: 1 MKITIAQINPIIGDIEGNFIKIKDAILKALSDKSDIVVFSELSLLGYPPFDLLKNNIIKN 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + + I++G P + + NS+ + II DK N Sbjct: 61 KIEEGVKRILQE--NFPINILLGAPYFEDNRIYNSIYWIKENKIIKRIDKFYFSNDPI-G 117 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNIC---KHLKKQGAEFLFSLNASPYYH 181 + F G + D + + ++G+ I +D +S+ +LK + + +++S YY Sbjct: 118 QGNYFSYG-TPDFLEIDNKKIGLFIGDDFIFSSDHSNYKDYLKTS--DLILIISSSFYYF 174 Query: 182 NKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNF 241 K ++R E ++ + +IYVNQVGG ELIF+G S + +L F+ + F E Sbjct: 175 GKRQERIEKISQLAKGIEKEVIYVNQVGGNGELIFEGGSLAISKKGELLFEGEIFKEDIK 234 Query: 242 MTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + S ++ Y+ VL +RD+++K+ F K +IGLSG Sbjct: 235 TIDLKNLYPTSSKG--------------EDISFLYDGLVLGVRDFIKKSGFQKAVIGLSG 280 Query: 302 GIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 GIDSAL A IA +ALG+ENV + LP YTS +S+EDA +K LG ++ ++PI D+ Sbjct: 281 GIDSALVACIAREALGEENVLGVSLPSIYTSRESIEDAEKLSKNLGIEFRIIPISDIFYS 340 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + ++ + EN+QSRIRGN+LM +SN + +LL T N+SE GY TLYGD Sbjct: 341 YLKELNPS-GNPIMDVAEENLQSRIRGNLLMFISNREEYILLATGNRSEALTGYCTLYGD 399 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQE 481 +G + D+YKT V++LA++ N + E+IP +IL K+PSAELRP Q D++ Sbjct: 400 TAGALEVIGDIYKTTVYELANYVNKN---------NEIIPQNILAKAPSAELRPGQKDED 450 Query: 482 SLPPYPILDDIIKRIVENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITA 540 SLPPY ILD I+K V+ +S Q Y E V+ V + SEYKRRQ P +I + Sbjct: 451 SLPPYSILDPILKAYVDENKSLEEIVQMGYKREIVKTVIEKVERSEYKRRQIPPVLRIRS 510 Query: 541 KSFGRDRLYPISNK 554 K+ ++R++P+ K Sbjct: 511 KNPLKERIFPLVYK 524 >gi|168177897|ref|ZP_02612561.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum NCTC 2916] gi|226947789|ref|YP_002802880.1| NAD synthetase [Clostridium botulinum A2 str. Kyoto] gi|182670412|gb|EDT82386.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum NCTC 2916] gi|226841373|gb|ACO84039.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A2 str. Kyoto] Length = 638 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 131/633 (20%), Positives = 232/633 (36%), Gaps = 88/633 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ A V DI NI ++ + + LI+F EL I+ Y +L ++ I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQRLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I +G P + + N V++ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAIGAPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N + + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQLSQW 254 L + E +T E + ++ Sbjct: 248 NGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAINDV 307 Query: 255 NYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E + +N +L + N K +IG+SGG+DS L Sbjct: 308 GDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLA 367 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +EN+ TI +P T+ ++ +A + K L + I D F Sbjct: 368 LLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQHF 427 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 428 KDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDHM 485 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 ++ + KT V L + + + + I IL+ S EL P Sbjct: 486 SMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEGNIV 541 Query: 477 QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + + + + I Y+ ET+ + Sbjct: 542 QKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFFT 601 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P F Sbjct: 602 QQFKRSAVPDGPKVGTISLSPRGDWRMPSDASF 634 >gi|316940918|gb|ADU74952.1| NAD+ synthetase [Clostridium thermocellum DSM 1313] Length = 645 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 127/637 (19%), Positives = 238/637 (37%), Gaps = 91/637 (14%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K ++ A VG N + + + G+ +++F EL I+GY DL + Sbjct: 1 MKNGFFRVGAAVPRLKVGGCRYNSDQIIGLIGKGEKAGIQILVFPELSITGYTCGDLFHQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 ++ + + + +T + ++G P + N V + G I+ V K +PN Sbjct: 61 ETLLDDAKVQLGRILEETKNSSCISLIGMPLGIDNQLFNCAVAIQKGRILGVVPKTYVPN 120 Query: 120 YSEFHEKRTFISGYS---------------NDPIVFRDIR----LGILICEDIWKNSNIC 160 YSEF+E+R F SG + D ++F D + GI ICED+W Sbjct: 121 YSEFYEQRWFSSGRNALRDTIMLCGQEVPFGDDLLFEDEKGEMCFGIEICEDLWVPVPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 GA +F+L+AS K + R E+ Q + +Y + + +++F G Sbjct: 181 SFQAMAGALVIFNLSASNEIVGKYEYRKELTRQQSARCIAGYVYTSSGVDESTTDVVFGG 240 Query: 219 ASFCFDGQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDS---------------- 261 + F+ L + EQ +E + ++ + Sbjct: 241 HAMIFENGSLLCESERFLIDEQLIFSEIDIQKLMNDRRKNTSFMELWRDNGREFRKVKFE 300 Query: 262 -------------ASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++P + + +L ++ + +IG+SGG Sbjct: 301 IEEFEAENITRYVPPHPFVPSDGSSRDRRCSEIFAIQTSALAKRIRHTGLKRAVIGISGG 360 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS L + A ++N+ I +P TS + +A K++ + + I D Sbjct: 361 LDSTLALLVTAKAFDLLNIPRKNILAITMPGFGTSDVTYTNAMEFMKSMDVEIREINIKD 420 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F + I EN+Q+R R ILM ++N +++ T + SE+++G+ T Sbjct: 421 ACLQHFKDIGH--DPSIHDITYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCT 478 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-- 475 GD + + KT V L W + L + + IL+ S EL P Sbjct: 479 YNGDHMSMYAVNASIPKTLVSFLVRWVADN----MLESKAKDVLYRILDTPISPELLPPD 534 Query: 476 -----HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE--- 519 +Q ++ + PY + D + ++ + + +Y D+T++ Sbjct: 535 AKGEINQKTEDIIGPYELHDFFLYHMLRYGAAPGKILILAKKAFEGKYTDDTIKKWLKVF 594 Query: 520 -HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ S D P Sbjct: 595 VKRFFSQQFKRSCLPDGPKVGTISLSPRGDWRMPSDA 631 >gi|261880533|ref|ZP_06006960.1| glutamine-dependent NAD+ synthetase [Prevotella bergensis DSM 17361] gi|270332756|gb|EFA43542.1| glutamine-dependent NAD+ synthetase [Prevotella bergensis DSM 17361] Length = 652 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 135/641 (21%), Positives = 244/641 (38%), Gaps = 100/641 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI +A +G+++I+F EL I+GY +DL ++ + Sbjct: 6 IKVASAIPTVQVADCRQNIIGIESLIAQAEGRGVEIIVFPELCITGYTCQDLFRQQPLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +++ L + +VG P + +LN V+L G I+ V K LPNY EF+ Sbjct: 66 AAENSMMHLLDFSRQLDIISIVGLPIVAGDLLLNCAVVLQKGRILGVVPKTYLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIVFR-------------------DIRLGILICEDIWKNSNICKHLKK 165 EKR F S P R G+ +CED+W + L Sbjct: 126 EKRWFASSQDLRPTTLRFAGCTIEVSSRPQLFRTCDGAVFGVELCEDVWAPTPPSNGLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K +++ Q + +Y + G+ +L++ G + + Sbjct: 186 AGADLIFNLSASDELTGKHAYLKKLIAQQSARTITGYVYSSAGYGESTQDLVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD------------------------ 259 + L + F+ + M D + + ++ Sbjct: 246 E-DGVLLAESDRFAMTSQMQVAQIDIDRLRSDRRNNTTFINAQRVMLGEQAEFIDTEIIQ 304 Query: 260 --------DSASTMYIP-----LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 D +IP + + N V++L + +IIG+SGG+DS Sbjct: 305 TRDFKLERDVDPHPFIPAASNMQETCDEILNIQVMALAKRITHTQTKTLIIGVSGGLDST 364 Query: 307 LCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 + + K +++ + +P T+ ++ +A A K+LG + I + Sbjct: 365 MALLVCARTYDKLKKDRKDIIGVTMPGFGTTDRTYTNAIALMKSLGITIREINISQSIMQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + EN Q+R R ILM L+N M++ T + SE+++G+ T GD Sbjct: 425 HFEDIGH--DPNVHDVTYENAQARERTQILMDLANQLHGMVIGTGDLSELALGWATYNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH----- 476 + + KT + L + + I++ S EL P Sbjct: 483 HMSMYAVNTSIPKTLMQFLVRHVA-----TEMDEAVAATLLDIVDTPISPELIPADEEGA 537 Query: 477 --QTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQE-----YNDETVRYV 518 Q ++ + PY + D + + +++F N E Y+DET+ + Sbjct: 538 IKQKTEDLVGPYELHDFFLYYFLRYGFGPRKIFILAQKAFANTSAERTVGNYDDETIIHW 597 Query: 519 E----HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 598 LQVFCRRFFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 638 >gi|187777631|ref|ZP_02994104.1| hypothetical protein CLOSPO_01223 [Clostridium sporogenes ATCC 15579] gi|187774559|gb|EDU38361.1| hypothetical protein CLOSPO_01223 [Clostridium sporogenes ATCC 15579] Length = 638 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 133/633 (21%), Positives = 232/633 (36%), Gaps = 88/633 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ A V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDMCIEKKSKLIVFPELSITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I VG P + + N VI+ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAVGAPLLYKNSLYNCAVIIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGY------------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY +N + + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQKNIPFGTNLIFSDKFFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQLSQW 254 L + E +T E + ++ Sbjct: 248 NGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFKFTINDV 307 Query: 255 NYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E + +N +L + N K +IG+SGG+DS L Sbjct: 308 GVFDRPIDKYPFVPSNEEERAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLA 367 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +EN+ TI +P T+ ++ +A + K L + I D F Sbjct: 368 LLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQHF 427 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 428 KDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDHM 485 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------H 476 ++ + KT V L + + + + I IL+ S EL P Sbjct: 486 SMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEGNIS 541 Query: 477 QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + + + + I Y+ ET+ + Sbjct: 542 QKTEDIVGPYELHDFFLYYFIRQGTTPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFFT 601 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P F Sbjct: 602 QQFKRSAVPDGPKVGTISLSPRGDWRMPSDASF 634 >gi|150015930|ref|YP_001308184.1| NAD+ synthetase [Clostridium beijerinckii NCIMB 8052] gi|149902395|gb|ABR33228.1| NAD+ synthetase [Clostridium beijerinckii NCIMB 8052] Length = 632 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 132/635 (20%), Positives = 236/635 (37%), Gaps = 88/635 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+A A V D+ N+ + ++A + I+F EL ++ Y DL ++ Sbjct: 1 MDFIKVAAACPKTRVADVDYNVKNILQCIDDAVKNESKFIVFPELCLTAYTCGDLFLQEY 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + I + T D I VG P + + N +L GN++ + K LPNYS Sbjct: 61 LLNKALDGIFEILESTKDYDTLIAVGAPLLCESTLYNCAFLLFKGNVLGIVPKSYLPNYS 120 Query: 122 EFHEKRTFISGYSND------------------PIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G S + G+ ICED+W +L Sbjct: 121 EFYEKRWFTEGLSIEDERVDLPFQKDVPFGVNLIFSSSIANFGVEICEDLWVTIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K+ R +++ Q + IY + + +++F G Sbjct: 181 SLMGAHIIGNLSASNELVSKMDYRKSLISNQSARSICSYIYSSAGVHESTTDVLFSGHLL 240 Query: 222 CFDGQQQLAFQMKHFSEQNFM------------------------------TEWHYDQQL 251 + L + E + ++ Sbjct: 241 ISENGSLLKENDRFQRENEVIYSIVDVFKLKSERMKNLSFRDSSKFINKKPNTIKFEFSD 300 Query: 252 SQWNYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + ++P E + +N L ++ K I+G+SGG+DS Sbjct: 301 VSISTFDRFVDKHPFVPSYEKEREVRCKEIFNIQAAGLAKRLEHTGSKKAIVGISGGLDS 360 Query: 306 ALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V K+N+ TI +P T+ ++ +A K LG + I Sbjct: 361 TLALLVIVKTFELLGIDKKNIVTITMPGFGTTDRTYNNAINLCKELGTDLREINIVKASL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R R ILM ++N + +L+ T + SE+++G+ T G Sbjct: 421 QHFEDIGH--DKDIHDVTYENVQARERTQILMDIANKERGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + H T + I IL+ S EL P Sbjct: 479 DHMSMYSVNPSIPKTLVRYLVQYVAQHEST----EVVRDILMDILDTPVSPELLPKDANG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDE----TVRYVEHL 521 Q ++ + PY + D + +++ + +Y+DE + Sbjct: 535 EIAQKTEDIVGPYELHDFFLYHFIKHGSTKERIFFLARAAFKDDYSDEEIQKWLDKFIFR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNK 554 + ++KR P G K+ + S D P K Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDAK 629 >gi|258648555|ref|ZP_05736024.1| glutamine-dependent NAD+ synthetase [Prevotella tannerae ATCC 51259] gi|260851328|gb|EEX71197.1| glutamine-dependent NAD+ synthetase [Prevotella tannerae ATCC 51259] Length = 654 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 135/650 (20%), Positives = 232/650 (35%), Gaps = 96/650 (14%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +K+A A V D N + A +G D + EL ++ Y +DL + Sbjct: 1 MEDFIKVAAATPKVKVADCTYNQEQLIAVVRRAEAEGCDAVCCPELCLTAYTCQDLFQQD 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 ++ A+ L++ T ++VG P Q + + N ++ G+I + K +PNY Sbjct: 61 LLLKQSLQALTGLRAATKGLRVIVLVGLPLQLRGRLFNCAAVICDGHIYGIVPKSYIPNY 120 Query: 121 SEFHEKRTFISGYSNDP------------------IVFRDIRLGILICEDIWKNSNICKH 162 EF+E R F S +S + G+ ICED+W + Sbjct: 121 REFYEARWFSSAFSLEKDATITLEGEMIPVSAGLIFQTPCFSFGVEICEDLWAPQPPSTY 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 L +QGAE +F+L+AS K R +V GQ + H IY G+ +L+F GA Sbjct: 181 LAQQGAEIIFNLSASNELTGKHAYRRALVAGQSARCHCGYIYAGAGFGESTQDLVFSGAD 240 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL----------- 269 + + +A ++ + F+ D + M + S T P Sbjct: 241 LIAENGKIIAESQRYTLDAQFIFS-DIDVVQLRHERMVNTSFHTSPQPHTLAPTIIALPQ 299 Query: 270 --------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 E + LSL +Q N ++G+SGG+ Sbjct: 300 RNSETKATLLRSVNPLPFVPEGDELADRCEEILHIQSLSLAQRLQHTNAKTAVVGISGGL 359 Query: 304 DSALCAAIAVDAL---GKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + G++ + I +P T+ ++ +A K LG + I Sbjct: 360 DSTLALLVCTRTFDLLGRDRADIVGITMPGFGTTDRTYNNALKLMKGLGITIREISIRAA 419 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 F + + +V EN Q+R R ILM +N +++ T + SE+++G+ T Sbjct: 420 CEQHFKDLGADMAS--HDVVYENGQARERTQILMDGANQMGGLVIGTGDLSELALGWATY 477 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-- 476 GD + + KT V L ++ H + +L+ S EL P Sbjct: 478 NGDHMSMYGVNASIPKTLVRHLVAYVAQHTADDEISAT----LMDVLDTPISPELIPADK 533 Query: 477 -----QTDQESLPPYPILDDIIKRIVE------------------NEESFINNDQEYNDE 513 Q ++ + PY + D + + N + Sbjct: 534 DGQIVQKTEDLVGPYELHDFFLYHFLHNGSRPSKVFNLACAAFDGNNPRVAQFQPAVILK 593 Query: 514 TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRD--RLYPISNKFRDHISE 561 +R + ++KR P G + + S P D + E Sbjct: 594 WLRTFLRRFFTQQFKRSCLPDGPMVGSCSLSPRGLWRMPSDATATDWLKE 643 >gi|210616215|ref|ZP_03290995.1| hypothetical protein CLONEX_03214 [Clostridium nexile DSM 1787] gi|210149881|gb|EEA80890.1| hypothetical protein CLONEX_03214 [Clostridium nexile DSM 1787] Length = 639 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 129/627 (20%), Positives = 237/627 (37%), Gaps = 85/627 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A LN V D+ N + R +E G +++F EL I+GY DL + + Sbjct: 6 VKVAAATLNTKVADVEHNKWEIFRLIDETIENGAKIVVFPELCITGYTCGDLFSQDILLS 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A++ + + T VG P + N + G +I + K LPNYSEF+ Sbjct: 66 QSAKALEEIAAYTTGKDGLFFVGLPYVVCNKLYNVAAAVCDGEVIGMVTKTFLPNYSEFY 125 Query: 125 EKRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 E R F G ++ + +CED+W Sbjct: 126 EMRQFQPGPKKADWIPYGEEEIPFGPQILFACEELPNLVVSAEVCEDVWSPVPPSIQAAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R ++++GQ + + +Y N G+ +++F G + Sbjct: 186 AGATIVVNCSASDETVGKDAYRKQLISGQSARLIAGYVYANAGDGESTTDVVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN-----YMSDDSASTMYIPL--------- 269 + L+ + + F Q +E D+ +S+ M +D + +P Sbjct: 246 ENGSILS-ESERFMNQTIYSEIDVDRIVSERRKNTTFQMEEDLDRFIRVPFSIKVEDTKL 304 Query: 270 ------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 + E + L+ + N ++G+SGG+DS L + Sbjct: 305 TRTFEKLPFVPENESLRNRCCEESLMIQAMGLKKRLNHTNCKSAVVGISGGLDSTLALLV 364 Query: 312 AVDAL---GKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A G + ++ + +P T+ ++ ++A K LG + I D V F + Sbjct: 365 TAKAFDLQGIDRSCIEAVTMPCFGTTDRTYQNACVLTKKLGATLHEVNIQDAVRVHFRDI 424 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 EE + EN Q+R R +LM ++N + M++ T + SE+++G+ T GD + Sbjct: 425 GH--SEEKHDVTYENAQARERTQVLMDIANQTGGMVIGTGDMSELALGWATYNGDHMSMY 482 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L + L + IL+ S EL P Q + Sbjct: 483 GVNSSVPKTLVRHLVQYCADTCEDKELQE----VLVDILDTPVSPELLPPKEGEIAQKTE 538 Query: 481 ESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYK 528 + + PY + D + ++ + + Y+ +T+ + ++K Sbjct: 539 DLVGPYELHDFYLYYMMRFGYAPSKIYRLARQTFEGMYDKDTILKWLNTFYRRFFSQQFK 598 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISN 553 R P G K + + D P Sbjct: 599 RSCLPDGPKTGSVALSPRGDLRMPSDA 625 >gi|118443772|ref|YP_878612.1| NAD synthetase [Clostridium novyi NT] gi|118134228|gb|ABK61272.1| glutamine-dependent NAD+ synthetase [Clostridium novyi NT] Length = 637 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 141/636 (22%), Positives = 242/636 (38%), Gaps = 88/636 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++A A VGDI N+ + + A ++ L++ EL I+ Y DL ++ Sbjct: 1 MNFIRVASACPVVNVGDIKFNVENIKNCIDLALKENSKLVILPELSITAYTCADLFLNQT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ I + + D I VG P + N I+ G I+ + K LPNYS Sbjct: 61 LIEKSMEGIKDICDFSLDKDILIAVGAPLLFNYSLYNCAYIIYNGKILGIVPKNYLPNYS 120 Query: 122 EFHEKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G+ N + + G ICED+W +L Sbjct: 121 EFYEKRWFTEGHDIISEKVNLPFQNDVPFGINLLFTSGNFKFGFEICEDLWTVIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V+ Q + +Y + + +++F G Sbjct: 181 ALMGANIIGNLSASNELVSKADYRKFVVSSQSARCMSSYVYASSGVFESTTDVVFSGHLM 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQL 251 + + L + E +T E ++ + Sbjct: 241 IAENGRILKSNNRFQRENEVITSIIDVDKINNMRMKNLSFRDSKRACHIKPLEISFNFKD 300 Query: 252 SQWNYMSDDSASTMYIPLQEEEA------DYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + ++P E E +N L + KVI+G+SGG+DS Sbjct: 301 TNICNFDRKINKHPFVPSNEHEREVRSKEIFNIQSAGLAKRLNHTGLKKVIVGISGGLDS 360 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L +AV+ ++N+ TI +P T+ ++ +A K LG + + I D Sbjct: 361 TLALLVAVNTFDLLKLPRKNIITITMPGFGTTDRTYNNAVDLCKKLGTDFREINIVDSCL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + E + EN+Q+R R ILM L+N A+L+ T + SEI++G+ T G Sbjct: 421 QHFKDIGHPA--EIHDVTYENVQARERTQILMDLANKEAALLVGTGDLSEIALGWATYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + H + I IL+ S EL P Sbjct: 479 DHMSMYSVNCSIPKTLVRYLVKFSAEHNSEKDISD----ILIDILDTPVSPELLPKDKDG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEESF--------INNDQEYNDETVRYVE----HL 521 Q ++ + PY + D + + +F +Y++ET++ Sbjct: 535 KIAQKTEDIVGPYELHDFFLYYFMRQNATFEKILYLAKEAFKDDYDEETIKKWLDKFMRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 + ++KR P G K+ S D P + Sbjct: 595 FFTQQFKRSAIPDGPKVGTISLSPRGDLKMPSDASY 630 >gi|300853880|ref|YP_003778864.1| glutamine-dependent NAD(+) synthetase [Clostridium ljungdahlii DSM 13528] gi|300433995|gb|ADK13762.1| glutamine-dependent NAD(+) synthetase [Clostridium ljungdahlii DSM 13528] Length = 637 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 131/636 (20%), Positives = 237/636 (37%), Gaps = 88/636 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++++ A V DI N+ + + A + L++F EL I+ Y DL ++ Sbjct: 4 MDFVRVSAACPLTNVADIEFNLNNIKLCIDRALEEKSKLVVFPELCITSYTCADLFEQQL 63 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ A+ L + D I VG P + N I+ G+I+ + K +PNY Sbjct: 64 LLEKSVEALKKLCDYSKDIDILIAVGAPLTYNCCLYNCAYIIFQGSILGIVPKSYIPNYE 123 Query: 122 EFHEKRTFISGY------------------SNDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G +N + + GI ICED+W +L Sbjct: 124 EFYEKRWFTEGLKVTDEKVNFYFQEDIPFGTNLIFTCGNFKFGIEICEDLWTVVPPSSYL 183 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +++ Q + IY + + +L+F G Sbjct: 184 CLMGANIIGNLSASNEVVSKSTYRRSLISSQSARCMCSYIYSSCGVFESSTDLVFSGDMC 243 Query: 222 CFDGQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQL 251 + L + E +T E + + Sbjct: 244 ISENGAILESGERFKRENQIITTIVDLGRLAAQRLRNVSFRDSVKLFLEKPIEVKFQFET 303 Query: 252 SQWNYMSDDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + ++P +N +L V N + +IG+SGG+DS Sbjct: 304 MNYGKFDRTVDKHPFVPSGKDEREIRCREIFNIQTSALAKRVSHTNLKRAVIGISGGLDS 363 Query: 306 ALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V ++N+ T+ +P T+ ++ +A K+LG + + I D Sbjct: 364 TLALLVTVKTFDMLKISRDNIITVTMPGFGTTDRTYNNAVDLCKSLGTELREINIVDACL 423 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S E + EN+Q+R R I+M ++N +++ T + SE+++G+ T G Sbjct: 424 QHFKDISH--DREIHDVTYENVQARERTQIIMDIANKEGGLVIGTGDLSELALGWCTYNG 481 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + ++ + I IL+ S EL P Sbjct: 482 DHMSMYSVNCSIPKTLVRYLVRYVADKEVSKNISD----ILIDILDTPVSPELLPKDKNG 537 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVE----HL 521 Q ++ + PY + D + V + S +Y ++ + Sbjct: 538 KIAQKTEDIVGPYELHDFFLYYFVRHSYSPEKILFLAKQAFKNDYTNDVICKWLKVFTKR 597 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 + ++KR P G K+ S D P F Sbjct: 598 FFTQQFKRSAIPDGPKVGTVSLSPRGDWRMPSDASF 633 >gi|325298106|ref|YP_004258023.1| NAD+ synthetase [Bacteroides salanitronis DSM 18170] gi|324317659|gb|ADY35550.1| NAD+ synthetase [Bacteroides salanitronis DSM 18170] Length = 643 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 127/632 (20%), Positives = 248/632 (39%), Gaps = 89/632 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N +A A G+ +I+F EL ++GY DL + ++ Sbjct: 6 VKVAAAVPLVKVADCQYNAEQAESLIARAEGSGVQVIVFPELNLTGYSCGDLFGQALLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T ++G P + + ++N V++ G I+ + K LPNY EF+ Sbjct: 66 QAEMALMRVLNNTRQLDIISIMGMPVRVESVLMNCAVVIQKGKILGIVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 E R F S ++ N ++R GI +CED+W L + Sbjct: 126 EHRWFASAFTYPDEKVVRLCGQLAPVGANLLFESSEMRFGIELCEDVWAPVPPSSALALK 185 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GAE +F+L+A +K + ++ Q + ++ + G+ +++F G + ++ Sbjct: 186 GAEIIFNLSADTENISKHQYLRSLLAQQSARCLSGYVFASSGFGESTTDVVFAGNALIYE 245 Query: 225 GQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 LA + F +Q ++E ++ S+ + ++ Sbjct: 246 NGTLLAASERFSFDKQLVISEIDVERLRSERLVNTTFASSVRQAGAGTLKVIQTERVPEK 305 Query: 263 ---------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P + E ++ V L + V++G+SGG+DS L Sbjct: 306 ELSLTRKIEPHPFVPAGGKLLDERCEEIFSIQVAGLAKRLVHTGCKTVVVGISGGLDSTL 365 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V K + + I +P T+ ++ +A ++LG + I + Sbjct: 366 ALLVCVKTFDKLGLSRKGIVGITMPGFGTTGRTHRNAVELMRSLGVTSREISIREACLQH 425 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + Q + + EN Q+R R ILM +N +++ T + SE+++G+ T GD Sbjct: 426 FEDIGQ--DADVHDVTYENSQARERTQILMDYANKIGGLVIGTGDLSELALGWATYNGDH 483 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 + + KT V L +W G+ + ++ I++ S EL P Sbjct: 484 MSMYGVNASIPKTLVRYLVNWVAETGVDAD----SQTTLLDIIDTPISPELIPADENGNI 539 Query: 477 -QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLY 523 Q ++ + PY + D + + + + Y+D T++ + Sbjct: 540 KQKTEDLVGPYELHDFFLYYFLRFGFRPEKIYYLTCLAFRGNYDDATIKKWLANFFRRFF 599 Query: 524 GSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 SQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 631 >gi|254519746|ref|ZP_05131802.1| NAD+ synthetase [Clostridium sp. 7_2_43FAA] gi|226913495|gb|EEH98696.1| NAD+ synthetase [Clostridium sp. 7_2_43FAA] Length = 634 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 136/636 (21%), Positives = 240/636 (37%), Gaps = 88/636 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+A A V DI N+ +EA + G I+F EL I+ Y DL + S Sbjct: 1 MDFIKVAAACPMTRVADIDYNLENILICLDEAYKNGAKSIVFPELAITSYTCSDLFMQYS 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ + AI+ L + I +G P + + N I+ G ++ + K +PNYS Sbjct: 61 LLEKANLAIEKLIKKSAGLDMLIAIGAPLSFKNVLFNCAYIIFDGKLLGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISGYS----------------NDPIVFRDIR--LGILICEDIWKNSNICKHL 163 EF+EKR F G ++F R G ICED+W +L Sbjct: 121 EFYEKRWFSEGLGIIDEKVDFAFQKDVPFGTNLIFTSGRYSFGFEICEDLWVTIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +++ Q + IY + + +L+F G Sbjct: 181 SLLGANIIGNLSASNELVSKKDYREALISNQSARCMSAYIYSSAGVHESTTDLLFSGHML 240 Query: 222 CFDGQQQLAFQMKH-------------------------FSEQNFMTEWH-----YDQQL 251 + L + F + + + + ++ Sbjct: 241 IAENGTMLKENERFQRNNEVIYSCIDVFRLNSERLKNISFRDASRIVPFEAEVINFNYMN 300 Query: 252 SQWNYMSDDSASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + N ++P + +N +L ++ N K +IG+SGG+DS Sbjct: 301 TTINNFDRFIDKHPFVPSNAKLREERCKEIFNIQAAALAKRMEHTNLKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V +N+ TI +P T+ ++ +A K LGC + I Sbjct: 361 TLALLVVVKTFELLGLDNKNIVTITMPGFGTTDRTYNNALTLCKELGCDLREINIVKAAL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ + EN+Q+R R ILM L+N +L+ T + SE+++G+ T G Sbjct: 421 QHFEDIGH--DKDIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + ++ IL+ S EL P Sbjct: 479 DHMSMYSVNPSIPKTLVRYLVRYVAEKESST----EVSDTLLDILDTPVSPELLPKSDKG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDE----TVRYVEHL 521 Q ++ + PY + D + ++N S +Y+ E + + Sbjct: 535 EITQKTEDIVGPYELHDFFLYHFIKNGSSKERIKLLAEKAFKDDYSKEEIAKWLDKFIYR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 + ++KR P G K+ + S D P F Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDASF 630 >gi|295104732|emb|CBL02276.1| NAD+ synthetase [Faecalibacterium prausnitzii SL3/3] Length = 642 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 131/626 (20%), Positives = 234/626 (37%), Gaps = 83/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK A V D N + + A ++G+ L +F E ++GY DL +++ Q Sbjct: 6 LKAAAFSPALRVADCTYNAQQVLAQLQAAAQRGVKLAVFPEFCLTGYTCGDLFLQRTLQQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A++ L + + +VG P + N +L G ++ V K LPNY EF+ Sbjct: 66 GALDALEWLLAQSRTLDTVALVGLPLLVHGKLYNCAAVLCRGQLLGVVPKTYLPNYGEFY 125 Query: 125 EKRTFISGYS--------------NDPIVFRD-----IRLGILICEDIWKNSNICKHLKK 165 EKR F G + ++FR LG+ +CED+W Sbjct: 126 EKRQFTPGSTEVQTVTVCGQQVPFGTSLLFRCRQMPSFVLGVELCEDLWSALPPSTFHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R +V Q + + +Y + G+ +++F G Sbjct: 186 AGATVIANLSASDETVGKAEYRRALVANQSARLLCGYLYASAGHGESTTDMVFAGHDLIA 245 Query: 224 DGQQQL-----------------------AFQMKHFS---EQNFMTEWHYDQQLSQWNYM 257 + L + F E E+ + + Sbjct: 246 EDGSILAETAPFAGDHAETELDCQRMEAERARNTSFEHTAEGYITVEFDLTPEETVLTRR 305 Query: 258 SDDSASTMYIPLQEEEADYNACVL---SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 D + P + + L ++ + +IG+SGG+DS L +AV Sbjct: 306 IDPAPFVPGDPQRRAARCELILKMQADGLAKRLEHAHAKTAVIGISGGLDSCLALLVAVR 365 Query: 315 ALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+ +V + +P T+ ++ +A LG + + I D V F+ + Q Sbjct: 366 AMKQLHRSAADVLAVTMPCFGTTKRTRSNAEILCGELGVSFQEIRIADTVRSHFADIGQ- 424 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 E + EN Q+R+R LM L+N + +++ T + SE+++G+ T GD + Sbjct: 425 -DETVLDVTFENGQARVRTLELMDLANRTGGLVVGTGDLSELALGWATYNGDHMSMYGVN 483 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESL 483 + KT V L + T+ L + IL+ S EL P Q ++ + Sbjct: 484 AGVPKTLVRYLVQYEAETAATAALHD----VLLDILDTPVSPELLPAKDGEIAQITEDLV 539 Query: 484 PPYPILDDIIKRIV----------ENEESFINNDQEYND----ETVRYVEHLLYGSEYKR 529 PY + D + ++ ++ EY D + +R + ++KR Sbjct: 540 GPYELHDFYLYYVLRCGFGPAKIYRLAKAAFAGRAEYTDAVLYKWLRNFYWRFFAQQFKR 599 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 600 SCLPDGPKVGSVTLSPRGDWRMPSDA 625 >gi|153938594|ref|YP_001389901.1| NAD synthetase [Clostridium botulinum F str. Langeland] gi|152934490|gb|ABS39988.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum F str. Langeland] gi|295317984|gb|ADF98361.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum F str. 230613] Length = 638 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 133/633 (21%), Positives = 230/633 (36%), Gaps = 88/633 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ A V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I VG P + + N VI+ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAVGAPLLYKNSLYNCAVIIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N + + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQLSQW 254 L + E +T E + ++ Sbjct: 248 NGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAINDV 307 Query: 255 NYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E + +N +L + N K +IG+SGG+DS L Sbjct: 308 GNFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLA 367 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +EN+ TI +P T+ ++ +A + K L + I D F Sbjct: 368 LLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQHF 427 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 428 KDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDHM 485 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 ++ + KT V L + + + + I IL+ S EL P Sbjct: 486 SMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEGNIV 541 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + + + I Y+ ET+ + Sbjct: 542 QKTEDIVGPYELHDFFLYYFIRQGATPDKIKLLAKIAFKDSYDKETIDKWFSYFIRRFFT 601 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P F Sbjct: 602 QQFKRSAVPDGPKVGTISLSPRGDWRMPSDASF 634 >gi|237733660|ref|ZP_04564141.1| NAD+ synthetase [Mollicutes bacterium D7] gi|229383258|gb|EEO33349.1| NAD+ synthetase [Coprobacillus sp. D7] Length = 644 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 128/635 (20%), Positives = 239/635 (37%), Gaps = 85/635 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + ++ N EA +++ EL ++GY EDL + + Sbjct: 16 IRVAAGSFETSIANVKNNSENICNLINEAYHNDARVLVLPELCLTGYTCEDLFNQDRLLN 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + T+ + T++ +VG P Q + N ++ G ++A+ K ++PNY EF+ Sbjct: 76 EAKQQLQTIITATNNKDLITIVGLPYQHLNSLYNVAAVIHQGALLALVPKTHIPNYQEFY 135 Query: 125 EKRTFI--------SGYSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F + ++ I F D + G+ ICED+W L Sbjct: 136 EARRFEQAPKENTLTNFNGQKIPFGTHYVFASTTNSDFKFGVEICEDLWLPDAPSTKLAL 195 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +V+ Q + + +Y N G+ +++F G Sbjct: 196 NGANLILNPSASNEITTKSDYRRLLVSSQSARLVCGYVYCNAGNGESTTDVVFSGHHIIS 255 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHY-----------------------------DQQLSQW 254 + + + + F + + D + + Sbjct: 256 ENGTMIK-ESRGFDSELIYGDLDLKKLSSERRKMTTFKSYHNYETIYFDSTNIDLNTTYY 314 Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 S + + + ++ L ++ KV+IG+SGG+DS L + Sbjct: 315 YDPHPFVPSNRDLRAKRCKEVFDIQTRGLMQRLKATGIKKVVIGISGGLDSTLALLVCTM 374 Query: 315 ALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A K N + I +P T+ ++ +A + L + I + V F + Q Sbjct: 375 AFKKLNYDTKDIIAITMPCFGTTSRTKNNALGLMEELAVTSIEVDITESVRIQFRDIEQ- 433 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 E + EN+Q+R R ILM +N +++ T + SE+++G+ T GD + Sbjct: 434 -DENIHDVTYENVQARTRTEILMNKANQVGGLVIGTGDLSEVALGWSTYNGDHMSMYAVN 492 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQESL 483 + KT V L + S G E I IL+ S EL P Q ++ + Sbjct: 493 VSVPKTLVRYLVDYVASLY----HGEKLETILKDILDTPVSPELLPQENDQIVQKTEDIV 548 Query: 484 PPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYKRRQ 531 PY + D I +V ++ + +Y+ ET++ + ++KR Sbjct: 549 GPYELHDFFIYHMVRFGDEPRKLYRKTKLAFKDKYDKETIKKWLTKFYWRFFSQQFKRSC 608 Query: 532 APVGTKITAKSFGR--DRLYPI---SNKFRDHISE 561 P G K+ + S D P + + D I + Sbjct: 609 IPDGPKVGSVSLSPRGDWRMPSDANVSNWIDEIEK 643 >gi|322804823|emb|CBZ02376.1| NAD synthetase [Clostridium botulinum H04402 065] Length = 638 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 131/633 (20%), Positives = 231/633 (36%), Gaps = 88/633 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ A V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I +G P + + N V++ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAIGAPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N + + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQLSQW 254 L + E +T E + ++ Sbjct: 248 NGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAINDV 307 Query: 255 NYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E + +N +L + N K +IG+SGG+DS L Sbjct: 308 GDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLA 367 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +EN+ TI +P T+ ++ +A + K L + I D F Sbjct: 368 LLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQHF 427 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 428 KDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDHM 485 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 ++ + KT V L + + + + I IL+ S EL P Sbjct: 486 SMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEGNIV 541 Query: 477 QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + + + + I Y+ ET+ + Sbjct: 542 QKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFFT 601 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P F Sbjct: 602 QQFKRSAVPDGPKVGTISLSPRGDWRMPSDASF 634 >gi|170759603|ref|YP_001785884.1| NAD synthetase [Clostridium botulinum A3 str. Loch Maree] gi|169406592|gb|ACA55003.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A3 str. Loch Maree] Length = 638 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 131/633 (20%), Positives = 231/633 (36%), Gaps = 88/633 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ A V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I +G P + + N V++ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAIGAPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N + + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSEKINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQLSQW 254 L + E +T E + ++ Sbjct: 248 NGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAINDV 307 Query: 255 NYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E + +N +L + N K +IG+SGG+DS L Sbjct: 308 GDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLA 367 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +EN+ TI +P T+ ++ +A + K L + I D F Sbjct: 368 LLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQHF 427 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 428 KDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDHM 485 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 ++ + KT V L + + + + I IL+ S EL P Sbjct: 486 SMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEGNIV 541 Query: 477 QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + + + + I Y+ ET+ + Sbjct: 542 QKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFFT 601 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P F Sbjct: 602 QQFKRSAVPDGPKVGTISLSPRGDWRMPSDASF 634 >gi|288871329|ref|ZP_06117233.2| glutamine-dependent NAD+ synthetase [Clostridium hathewayi DSM 13479] gi|288863862|gb|EFC96160.1| glutamine-dependent NAD+ synthetase [Clostridium hathewayi DSM 13479] Length = 646 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 126/634 (19%), Positives = 236/634 (37%), Gaps = 84/634 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + V D N + + L++F EL ++ Y DL + + + Sbjct: 15 IRVAAATPDVKVADPQFNRTEICALIRAGIERKAKLMVFPELSLTAYTCGDLFGQDALLY 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + +T +G P + + N+ V + G I+ + K N+PNYSEF+ Sbjct: 75 GARRELKEILKETEGSDLLAFIGMPWERSGKLYNTAVAVQNGRILGIVPKSNIPNYSEFY 134 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R F G +V + ICED W Sbjct: 135 ERRYFEPGNEIPVMVSWEGQNFPMGTNILFACEEMPGFVVAAEICEDAWVPCPPSIRHTA 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R ++TG + + +Y N G+ +L+F G + Sbjct: 195 AGATVIVNCSASDETTGKDIYRRSLITGHSASLVCGYVYANAGDGESTQDLVFGGQNLIT 254 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + K F+ + + ++ ++ +S Sbjct: 255 ENGTCL-AESKRFANETIFADMDMERLNNERRRLSTYPVLNTGSYVTVGFHITEEEYDLE 313 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 ++P E E + + L+ + +IG+SGG+DS L + Sbjct: 314 RPIDPMPFVPTDEGQRNRRCEEILSIQAMGLKKRLAHTGCSHAVIGISGGLDSTLALLVT 373 Query: 313 VDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A N + + +P T+ ++ ++A K +G + + I + V F + Sbjct: 374 VRAFDMLNIPRHQIHAVTMPCFGTTDRTYQNACLMTKKVGAELTEIDIREAVTVHFRDIG 433 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + + EN Q+R R +LM L+N M++ T + SE+++G+ T GD + Sbjct: 434 HDISH--HDVTYENSQARERTQVLMDLANRWGGMVVGTGDMSELALGWATYNGDHMSMYG 491 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + + T G L V+ +L+ S EL P Q ++ Sbjct: 492 VNASVPKTLVRHLVRY---YADTCGEEELKAVLL-DVLDTPVSPELLPPKEGEIAQKTED 547 Query: 482 SLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHLLYGSEYKR 529 + PY + D + +++ + D +Y+ ETV + ++KR Sbjct: 548 LVGPYELHDFFLYQVLRYGYRPAKVFRLAKAAFDGQYDGETVLKWLKVFYRRFFSQQFKR 607 Query: 530 RQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 P G K+ + + D P R + E Sbjct: 608 SCLPDGPKVGSVAVSPRGDLRMPSDASSRLWLEE 641 >gi|326315766|ref|YP_004233438.1| NAD+ synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372602|gb|ADX44871.1| NAD+ synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 566 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 208/577 (36%), Positives = 315/577 (54%), Gaps = 39/577 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I +AQLN VGDI GN+ + A +A + G DL++FTEL + GY P D++ + F++ Sbjct: 2 LRITLAQLNLTVGDIEGNVQRMTDAARQAAQAGADLVVFTELALCGYYPGDMLEESGFME 61 Query: 65 ACSSAIDTLKSDTH-DGGAGIVVGFPRQDQE---GVLNSVVILDAGNIIAVRDKINLPNY 120 + + L+ + G VVG P + Q + NS+++L G I K LP Y Sbjct: 62 RVDAGMAALQDASRATPGLHWVVGTPTRAQGPGKRLHNSLLVLQDGAIRLTYAKQLLPTY 121 Query: 121 SEFHEKRTFISGYS-NDPIVFRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G + ++G L+CED W ++ N + L + + S Sbjct: 122 NIFDERRHFEPGPDVARILRIGQAQIGFLVCEDGWNDAVADYATNPFQRLADAAPDLVVS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + K + RH++ LP++YVNQVGGQD++++DGASF + + + F+ Sbjct: 182 INASPSHIGKREVRHQVFGDAARRHGLPVVYVNQVGGQDQIVYDGASFAAEPEAGVVFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL---QEEEADYNACVLSLRDYVQKN 290 F+E L + S D + +P + VL LRDY ++ Sbjct: 242 PRFAEDVRTL------CLEDGRFRSGDGGALPPVPREGLPTMDFYRQQIVLGLRDYARRC 295 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 F +V++G SGGIDSAL A+A +A+G ENV + +P +++S S++D+ A + LG + Sbjct: 296 GFGQVVVGSSGGIDSALTLALAAEAMGAENVVAVTMPSRFSSSGSVDDSVALCRNLGVRL 355 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 PI DLV + + + G+ EN+Q+RIRG ILM SN +LLTT NKSE Sbjct: 356 HTHPIADLVAGYAAQFEASFGQPLEGLPLENLQARIRGTILMEYSNAFGHLLLTTGNKSE 415 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ISVGY TLYGD +GG L DLYKT+VF+L+ N+H E+IP +I++K PS Sbjct: 416 ISVGYCTLYGDTNGGLGLLGDLYKTEVFELSRHVNAHAGR-------ELIPQAIIDKEPS 468 Query: 471 AELRPHQTDQESLPPYPILDDIIKRIVENE---ESFINNDQEYN---------DETVRYV 518 AEL P Q D +SLPPYP+LD ++K ++E E + + +++ V V Sbjct: 469 AELAPGQRDVDSLPPYPVLDQVLKLLIEGEGLSHAEYADARDFAARLQHDEAGRALVNRV 528 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKF 555 ++ +EYKRRQAP ++ AK+FG R PI+ K+ Sbjct: 529 RRMIARNEYKRRQAPPILRVRAKAFGNGRQMPIAAKY 565 >gi|160901039|ref|YP_001566621.1| NAD+ synthetase [Delftia acidovorans SPH-1] gi|160366623|gb|ABX38236.1| NAD+ synthetase [Delftia acidovorans SPH-1] Length = 566 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 206/575 (35%), Positives = 305/575 (53%), Gaps = 33/575 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L+I IAQLNP VGDIAGN+A+ A A R DL++F EL + GY P DL+ + +F + Sbjct: 2 LRITIAQLNPTVGDIAGNVARMAEAAARAARAQADLLVFPELSLCGYYPGDLLDEPAFRE 61 Query: 65 ACSSAIDTLKSDTHDGG-AGIVVGFPRQD---QEGVLNSVVILDAGNIIAVRDKINLPNY 120 + L T V+G P + + + NS+++L G + DK LP Y Sbjct: 62 RLEQGLQQLLQATRQWPQLHWVIGAPTRASGPGKPLHNSLLVLKDGAVRLRYDKQLLPTY 121 Query: 121 SEFHEKRTFISG-YSNDPIVFRDIRLGILICEDIWKNS------NICKHLKKQGAEFLFS 173 + F E+R F G + + ++G L+CED W ++ N + + + S Sbjct: 122 NIFDERRHFEPGPDAAKVLRIGQAQVGFLVCEDGWNDAGADYATNPFARMADAAPDLVVS 181 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQM 233 +NASP + K ++RHEI + LPI+YVNQ+GGQD+++FDGASF + + + F+ Sbjct: 182 INASPSHLGKREQRHEIFGQAATRHGLPILYVNQIGGQDQIVFDGASFAVEPGRGVVFEA 241 Query: 234 KHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFH 293 + F E ++ D + S +P E VL LRDY ++ F Sbjct: 242 ERFVEDLRTLQFD-DGRFLDAAGQPCMSVPAEGLPTMEFYRRQ--IVLGLRDYARRCGFT 298 Query: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 + ++G SGGIDSAL A+A +ALG +NV + +P +++S S++D+ + LG Sbjct: 299 RAVVGSSGGIDSALTLALAAEALGADNVVAVTMPSRFSSSGSVDDSVILCRNLGITLHEH 358 Query: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 PI +LV+ + + G+ EN+Q+RIRG LM SN +LLTT NKSEISV Sbjct: 359 PIRELVDGYARQFEASFGQPLQGLPLENLQARIRGTTLMEYSNAFGHLLLTTGNKSEISV 418 Query: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 GY TLYGD +GG L DLYKT+VF+L+ N E+IP +I++K PSAEL Sbjct: 419 GYCTLYGDTNGGLGLLGDLYKTEVFELSRHVNRSAGR-------ELIPQAIIDKPPSAEL 471 Query: 474 RPHQTDQESLPPYPILDDIIKRIVENEESFINN------------DQEYNDETVRYVEHL 521 P Q D++SLPPY +LD+I+K +E Q E V V+ + Sbjct: 472 APDQKDEDSLPPYAVLDEILKYAIEGRHLSTAEYGTAERFVTQLLGQPGGAELVDRVKRM 531 Query: 522 LYGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFR 556 ++ SEYKRRQAP ++ ++FG R PI+ + Sbjct: 532 IFRSEYKRRQAPPILRVRPRAFGTGRQMPIAAHYE 566 >gi|257438417|ref|ZP_05614172.1| putative NH(3)-dependent NAD(+) synthetase [Faecalibacterium prausnitzii A2-165] gi|257198996|gb|EEU97280.1| putative NH(3)-dependent NAD(+) synthetase [Faecalibacterium prausnitzii A2-165] Length = 644 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 126/627 (20%), Positives = 228/627 (36%), Gaps = 84/627 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK A V D A N + A +G+ L +F E ++GY DL +++ Q Sbjct: 6 LKAAALSPALRVADCAYNTRQILTELRAAAARGVKLAVFPEFCLTGYTCGDLFLQRTLQQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L + + +++G P + + N + G ++ + K LPNY EF+ Sbjct: 66 GALTGLQELLDASRELDTVVLMGLPLMVRGKLYNCAAVFCRGQLLGLVPKTYLPNYGEFY 125 Query: 125 EKRTFISGYS--------------NDPIVFRD-----IRLGILICEDIWKNSNICKHLKK 165 EKR F G + ++FR LG+ +CED+W Sbjct: 126 EKRQFTPGSTEVEWVNVCGQDVPFGTSLLFRCRQMPSFVLGVELCEDLWSALPPSTFHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R +V Q + + +Y + G+ +++F G Sbjct: 186 AGATVIANLSASDETVGKAEYRRALVENQSARLLCGYLYASAGHGESTQDMVFAGHDLIA 245 Query: 224 DGQQQL-----------------------AFQMKHFS---EQNFMTEWHYDQQLSQWNYM 257 + L + F E E+ + Sbjct: 246 ENGTLLAEVKPFAGGPAETELDCQRMESERARNTSFEPSTEGYQTVEFDLALTDTVLTRW 305 Query: 258 SDDSASTMYIPLQEEEADYNACVL---SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 D + + E + L ++ +IG+SGG+DS L +AV Sbjct: 306 VDPTPFIPHNEQLRAERCELILKMQADGLAKRLEHARAKTAVIGISGGLDSCLALLVAVR 365 Query: 315 ALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+ + +V + +P T+ ++ +A L + + I V+ F + Q Sbjct: 366 AMKQLGRPTTDVLAVTMPCFGTTKRTRSNAEILCDELHVSFTEIDIAATVHSHFRDIGQ- 424 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 E + EN Q+R+R LM +N + +++ T + SE+++G+ T GD + Sbjct: 425 -DESVLDVTYENGQARVRTLELMDTANRTGGLVVGTGDLSELALGWATYNGDHMSMYGVN 483 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQES 482 + KT V L + T L + IL+ S EL P Q ++ Sbjct: 484 AGVPKTLVRHLVRYEADIAATPALKE----VLLDILDTPVSPELLPAKDNGEIAQRTEDL 539 Query: 483 LPPYPILDDIIKRIV----------ENEESFINNDQEYND----ETVRYVEHLLYGSEYK 528 + PY + D + ++ + +EY D + +R + ++K Sbjct: 540 VGPYELHDFYLYYVLRFGFGPAKIFRLARAAFAGREEYPDAVLYKWLRNFYWRFFAQQFK 599 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISN 553 R P G KI + + D P Sbjct: 600 RSCLPDGPKIGSVTLSPRGDWRMPSDA 626 >gi|307565300|ref|ZP_07627793.1| NAD+ synthetase [Prevotella amnii CRIS 21A-A] gi|307345969|gb|EFN91313.1| NAD+ synthetase [Prevotella amnii CRIS 21A-A] Length = 655 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 133/643 (20%), Positives = 241/643 (37%), Gaps = 101/643 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V DI N+++ + +A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVASAIPAVKVADIQYNLSEIEKQVIKAEGEGVEIIVFPELSLTGYSCQDLFQQQVLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L T I+VG P +LN +++ G ++ + K LPNY EF+ Sbjct: 66 NIEIAVVQLLDFTRQLDITIIVGAPICVNSVLLNCALVIQHGKLLGIVPKTYLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S + +R GI ICED+W L Sbjct: 126 EKRWFASSQDLQLQSIYYVGDKMDISTDIQLFSTSQGVRFGIEICEDLWSPLPPSNQLTL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K +V Q + +Y + G+ ++++ G + + Sbjct: 186 AGAELIFNLSASDDLIGKHNYLKTLVAQQSARTICGYVYSSCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFS--EQNFMTEWHYDQ----------------QLSQWNYMSDDSASTM 265 + +L + K F Q ++E D+ +++ A Sbjct: 246 EN-GKLLAEAKRFEVEAQIIISEIDIDRLRIERRANTTFVNAQRPTMMQRLRANNQAILS 304 Query: 266 YIPLQ-----------------------------EEEADYNACVLSLRDYVQKNNFHKVI 296 IP E N V L + N V+ Sbjct: 305 NIPTCIPPSIQREFILTRSVYKYPFIPKGEELREHCEEILNIQVCGLAKRLLHINCKTVV 364 Query: 297 IGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 IG+SGG+DS L +A A ++ + + +P T+ ++ +A + L Sbjct: 365 IGVSGGLDSTLALLVASLAFDKLGYNRKGIIGVTMPGFGTTDRTYSNAITLMQKLDITIR 424 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I + V F+ + + EN Q+R R ILM +SN + +++ T + SE+ Sbjct: 425 EINISESVKQHFADIEHDIN--LHNTTYENSQARERTQILMDISNQAGGIVIGTGDLSEL 482 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 ++G+ T GD + + KT + L + +T+ I+ S Sbjct: 483 ALGWCTYNGDHMSMYAVNIGIPKTLIKHLVYYIAKDSTE----EVTKCTLNDIINTPISP 538 Query: 472 ELRPH-------QTDQESLPPYPILDDIIKRIVE-----------NEESFI-NNDQEYND 512 EL P Q ++ + PY + D + ++ +++F Sbjct: 539 ELTPADKNGNIIQKTEDLVGPYELHDFFLYYMLRFGFRPKKIFWLAQQAFKGEYADGIIL 598 Query: 513 ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 +R + ++KR P G K+ + S D P Sbjct: 599 HWLRIFYKRFFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 641 >gi|304382538|ref|ZP_07365033.1| NAD synthetase [Prevotella marshii DSM 16973] gi|304336369|gb|EFM02610.1| NAD synthetase [Prevotella marshii DSM 16973] Length = 650 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 131/647 (20%), Positives = 243/647 (37%), Gaps = 97/647 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A N V D N A+ + + +++++F EL ++GY +DL +++ + Sbjct: 7 IKVAAAVPNVQVADCDYNAAQIETLIARSEAEDVEIVVFPELSVTGYSCQDLFRQQTLLH 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A++ L T +VG P +LN V++ G ++ + K LPNY+EF+ Sbjct: 67 SAEQAMERLLDFTRSRDVIAIVGCPLSLGNLLLNCAVVIQHGELLGIVPKTFLPNYNEFY 126 Query: 125 EKRTFISGYSNDP--IVFRD-----------------IRLGILICEDIWKNSNICKHLKK 165 E+R F S P IVF + G+ ICED+W L Sbjct: 127 ERRWFASSRDLQPTEIVFAGKHTIISPAPILFRTQSRVTFGVEICEDVWTPQPPSTRLAL 186 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K ++ Q + +Y G+ ++++ G + Sbjct: 187 SGAEVIFNLSASNDLIGKHAYLRTLLMQQSARTISGYVYSGCGWGESTQDVVYGGNAIIA 246 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + +L + + FS + D + + ++D + Sbjct: 247 EN-GRLIAEGERFSLHPQLIVSQIDTEKLCHDRLTDTTFTATLSAEHLPRLTIIDCLAVR 305 Query: 262 ----------ASTMYIP-----LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 +IP + E N L + V++G+SGG+DS Sbjct: 306 PRPFHLCRNVEPLPFIPRTADLHADCEEILNIQATGLAHRLTHIRCRSVVLGISGGLDST 365 Query: 307 LCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + V A + + + +P T+ ++ ++A ++LG + I V H Sbjct: 366 LALLVCVRAFDKLGYDRRGIVGVTMPGFGTTDRTHDNAVTLMESLGVTLREINISTAVLH 425 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + EN Q+R R ILM +SN A+++ T + SE+++G+ T GD Sbjct: 426 HFKDIGH--DPSIHDVTYENAQARERTQILMDMSNELGAIVVGTGDLSELALGWATYNGD 483 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH----- 476 + + KT + L L I++ S EL P Sbjct: 484 HISMYGVNAGVPKTLIRHLVRHVADFV----LDAPAADTLRDIIDTPISPELIPADEHGH 539 Query: 477 --QTDQESLPPYPILDDIIKRIVENEESFIN--------------NDQEYNDETVRYV-- 518 Q ++ + PY + D + ++ + + + Y+ T+++ Sbjct: 540 IQQKTEDLVGPYELHDFFLYHMIRHGFAPAKLFMLACAAFNGHRPDAGSYDAATIKHWLT 599 Query: 519 --EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 + ++KR P KI + S D P R + E Sbjct: 600 VFIRRFFSQQFKRSCTPDAPKIGSISLSPRGDWRMPSDATARAWLDE 646 >gi|317502930|ref|ZP_07961025.1| NAD synthetase [Prevotella salivae DSM 15606] gi|315665964|gb|EFV05536.1| NAD synthetase [Prevotella salivae DSM 15606] Length = 642 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 135/633 (21%), Positives = 255/633 (40%), Gaps = 92/633 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + VGD+ N + + +A QG+++I+F EL I+ Y +DL + + Sbjct: 6 IKVASAIPSVKVGDVNYNTQQIEKLVSKAENQGVEIIVFPELAITSYTCQDLFRQDLLLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + AI +L T +VVG P +LN VI+ G+I+ + K LPNY+EF+ Sbjct: 66 STEEAIQSLLIFTQQLDIIVVVGAPIVVGNLLLNCAVIIQKGHILGIIPKTYLPNYNEFY 125 Query: 125 EKRTFISGYSNDP-------------------IVFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F S P + + ++ G+ ICED+W HL Sbjct: 126 EKRWFASSQDLRPTIISYAGHTLTISAESKLFLTSQGVKFGVEICEDVWAPIPPSNHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ + +L+A+ K K ++ Q + + +Y + G+ ++++ G + + Sbjct: 186 SGADLILNLSATDELLGKHKYLKSLLAQQSARMISGYVYSSCGFGESTQDVVYGGNALIY 245 Query: 224 DGQQQLAFQMKHFS--EQNFMTEWHYDQQLSQWN-------------------------- 255 + L + + FS Q +T+ ++ ++ Sbjct: 246 EN-GTLLVEGERFSVDSQLVVTQIDVERLRAERRNNTTFVNAQRAGMLNPNEELCYAIEQ 304 Query: 256 ----YMSDDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++ + +IP ++ E +N V+ L + V++G+SGG+DS Sbjct: 305 KKPFHIDRTISPCPFIPEEDDLADSCEEVFNIQVMGLAKRLIHTGCKHVVLGVSGGLDST 364 Query: 307 LCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + V K + + + +P T+ ++ ++A + L + I V Sbjct: 365 LALLVCVRTFDKLKLDRKGIIGVTMPGFGTTDRTYQNAIHLMEKLNISIREISIAKSVTQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + + I EN Q+R R ILM LSN ++ T + SE+++G+ T GD Sbjct: 425 HFEDIGHDMS--VHDITYENGQARERTQILMDLSNQVGGFVIGTGDLSELALGWATYNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH----- 476 + + KT + L + + + P I I+ S EL P Sbjct: 483 HMSMYGVNASVPKTLIQHLMRFVA-----TTMSPDIASILIDIVNTPISPELLPATQNDS 537 Query: 477 --QTDQESLPPYPILDDIIKRIV----ENEESFINNDQE----YNDETVRYVEHL----L 522 Q ++ + PY + D + + ++ FI ++ Y+ + ++ + Sbjct: 538 ISQKTEDLVGPYELHDFFLYYFLRYGFRPKKIFILAEKAFAGQYDVKCIKKWLTIFFRRF 597 Query: 523 YGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 598 FSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 630 >gi|296132671|ref|YP_003639918.1| NAD+ synthetase [Thermincola sp. JR] gi|296031249|gb|ADG82017.1| NAD+ synthetase [Thermincola potens JR] Length = 648 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 139/647 (21%), Positives = 247/647 (38%), Gaps = 97/647 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ A V D A NI++ + +EA+ + + +++F EL I+GY DL +K ++ Sbjct: 7 VRVGAATPKLRVADPAYNISEILKIVKEADEKNVAVLVFPELSITGYTCADLFGQKLLLE 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L T +VG P + + N V + G I+ KI+LPNY EF+ Sbjct: 67 KAVEFLGELLQQTETLDVLTIVGLPLMVEHKLFNCGVAVHRGRILGAVPKIHLPNYKEFY 126 Query: 125 EKRTFISGY----------------SNDPIVFRDIR----LGILICEDIWKNSNICKHLK 164 EKR F SG+ I+ + + LG+ ICED+W +L Sbjct: 127 EKRWFTSGHVLGQSVSEINLLGQYVPCGRIMIKAEKPSFLLGMEICEDLWAVIPPSSYLA 186 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA+ + +L+A +K R +++ Q + IY + + +L+F G + Sbjct: 187 LNGADIIANLSAGNELVSKADYRRQLILQQSARCMCGYIYASAGVYESTTDLVFGGHNMI 246 Query: 223 FDGQQQLAFQMKHFSEQ--NFMTEWHYDQQLSQWNYM----------------------- 257 + L + + F +TE ++ S+ Sbjct: 247 AEN-GILLKESERFKRDSSLIITEIDVERLASERMLNKTYADNYEINAGSRNFVIVETEF 305 Query: 258 -----------SDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLS 300 A ++P +N V L +Q N V++G+S Sbjct: 306 LKEYDMEDIGLERPVAPYPFVPGNPATVEERCREIFNIQVAGLAKRLQHTNMKHVVLGIS 365 Query: 301 GGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L + EN+ + +P T+ + +A KAL + I Sbjct: 366 GGLDSTLALLVTAQTFDTLHLPAENIVAVTMPGFGTTDITYTNALDLMKALHVTIREIDI 425 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 F + +Q+ I EN+Q+R R ILM L+N+ +++ T + SE+++G+ Sbjct: 426 KPACLQHFKDIGHNVQDL--DITYENVQARERTQILMDLANNIGGLVVGTGDLSELALGW 483 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD ++ + KT V L W + + T + IL S EL P Sbjct: 484 ATYNGDHMSMYSVNCSIPKTLVKFLVRWVADNIVN----EQTAEVLQKILNTPISPELLP 539 Query: 476 -------HQTDQESLPPYPILDDIIKRIVENEE--------SFINNDQEYNDETVRYVEH 520 Q ++ + PY + D + V + ++Y+ E ++ Sbjct: 540 PDTSGKIAQKTEDLIGPYELHDFFLYYTVRFGMHPKKVLFLADCAFKEKYSREEIKKWLK 599 Query: 521 ----LLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 + ++KR P G K+ S D P + R ++E Sbjct: 600 VFYNRFFSQQFKRSCLPDGPKVGTVSLSPRGDWRMPSDAEVRLWLAE 646 >gi|167755431|ref|ZP_02427558.1| hypothetical protein CLORAM_00945 [Clostridium ramosum DSM 1402] gi|167704370|gb|EDS18949.1| hypothetical protein CLORAM_00945 [Clostridium ramosum DSM 1402] Length = 644 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 127/635 (20%), Positives = 239/635 (37%), Gaps = 85/635 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + ++ N EA +++ EL ++GY EDL + + Sbjct: 16 IRVAAGSFETSIANVKNNSENICNLINEAYHNDARVLVLPELCLTGYTCEDLFNQDRLLN 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + T+ + T++ +VG P Q + N ++ G ++A+ K ++PNY EF+ Sbjct: 76 EAKQQLQTIITATNNKDLITIVGLPYQHLNSLYNVAAVIHQGALLALVPKTHIPNYQEFY 135 Query: 125 EKRTFI--------SGYSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F + ++ I F D + G+ ICED+W L Sbjct: 136 EARRFEQAPKENTLTNFNGQKIPFGTHYVFASTTNSDFKFGVEICEDLWLPDAPSTKLAL 195 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +V+ Q + + +Y N G+ +++F G Sbjct: 196 NGANLILNPSASNEITTKSDYRRLLVSSQSARLVCGYVYCNAGNGESTTDVVFSGHHIIS 255 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHY-----------------------------DQQLSQW 254 + + + + F + + D + + Sbjct: 256 ENGTMIK-ESRGFDSELIYGDLDLKKLSSERRKMTTFKSYHNYETIYFDSTNIDLNTTYY 314 Query: 255 NYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 S + + + ++ L ++ KV+IG+SGG+DS L + Sbjct: 315 YDPHPFVPSNRDLRAKRCKEVFDIQTRGLMQRLKATGIKKVVIGISGGLDSTLALLVCTM 374 Query: 315 ALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A K N + I +P T+ ++ +A + L + I + V F + Q Sbjct: 375 AFKKLNYDTKDIIAITMPCFGTTSRTKNNALGLMEELAVTSIEVDITESVRIQFRDIEQ- 433 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 E + EN+Q+R R ILM +N +++ T + SE+++G+ T GD + Sbjct: 434 -DENIHDVTYENVQARTRTEILMNKANQVGGLVIGTGDLSEVALGWSTYNGDHMSMYAVN 492 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQESL 483 + KT V L + S G E I IL+ S EL P Q ++ + Sbjct: 493 VSVPKTLVRYLVDYIASLY----HGEKLETILKDILDTPVSPELLPQENDQIVQKTEDIV 548 Query: 484 PPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYKRRQ 531 PY + D I +V ++ + +Y+ +T++ + ++KR Sbjct: 549 GPYELHDFFIYHMVRFGDEPRKLYRKTKLAFKDKYDKKTIKKWLTKFYWRFFSQQFKRSC 608 Query: 532 APVGTKITAKSFGR--DRLYPI---SNKFRDHISE 561 P G K+ + S D P + + D I + Sbjct: 609 IPDGPKVGSVSLSPRGDWRMPSDANVSNWIDEIEK 643 >gi|170756133|ref|YP_001780184.1| NAD synthetase [Clostridium botulinum B1 str. Okra] gi|169121345|gb|ACA45181.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum B1 str. Okra] Length = 638 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 130/633 (20%), Positives = 231/633 (36%), Gaps = 88/633 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ A V DI NI ++ + + LI+F EL I+ Y +L + + Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLMS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I +G P + + N V++ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAIGAPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N + + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQLSQW 254 L + E +T E + ++ Sbjct: 248 NGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAINDV 307 Query: 255 NYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E + +N +L + N K +IG+SGG+DS L Sbjct: 308 GDFDRPIDKYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLA 367 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +EN+ TI +P T+ ++ +A + K L + I D F Sbjct: 368 LLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQHF 427 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 428 KDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDHM 485 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 ++ + KT V L + + + + I IL+ S EL P Sbjct: 486 SMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEGNIV 541 Query: 477 QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + + + + I Y+ ET+ + Sbjct: 542 QKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKITFKDSYDKETIDKWFSYFIRRFFT 601 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P F Sbjct: 602 QQFKRSAVPDGPKVGTISLSPRGDWRMPSDASF 634 >gi|212550475|ref|YP_002308792.1| glutamine-dependent amidohydrolase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548713|dbj|BAG83381.1| glutamine-dependent amidohydrolase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 641 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 137/637 (21%), Positives = 251/637 (39%), Gaps = 91/637 (14%) Query: 2 LKK---LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF 58 ++ +I A V D N + + EAN Q + ++ F EL IS Y DL Sbjct: 1 MRNYGFFRIGAAIPQLKVADCEFNAQQVAKHITEANDQEVQVVCFPELSISSYTCGDLFL 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +++ I+ + L + + +VG P + + N V+ G I + K+ LP Sbjct: 61 QRTLIEGAEKVLVELLHNMQNLPICFIVGTPIEYNSKLYNCAVVCQHGKIKGIVPKVYLP 120 Query: 119 NYSEFHEKRTFIS--GYSNDPIVFRD-----------------IRLGILICEDIWKNSNI 159 NYSEF+EKR F S + I + D I+ I ICED+W Sbjct: 121 NYSEFYEKRWFESYSNDESTIITYADNTVLFGTNLLFSLDLDLIKFSIEICEDLWSVIPP 180 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFD 217 + GA+ +F+L+AS K + +++ Q + H +Y + G+ +L++ Sbjct: 181 SSYHAIAGAQLIFNLSASDELIGKQQYVKSLISQQSARCHTAYVYTSAGFGESTTDLVYS 240 Query: 218 GASFCFDGQQQLAFQMK-HFSEQNFMTEWHYDQQLSQWN--------------------- 255 G ++ ++ + L + F EQ + E YD S+ Sbjct: 241 GNAYVYENGKLLIESNRFQFHEQLIVCEIDYDLLNSERRKNTSFIGQPTTNNYKHIAIHQ 300 Query: 256 ------------YMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 S + + ++ + L + N +IIG+SGG+ Sbjct: 301 YPTINSPKLKRTINSTPFIPLSKNHNESCKEIFSIQISGLAKRIIHTNAQSLIIGVSGGL 360 Query: 304 DSALCAAIAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + V + K V + +P TS ++ +A + +L + + I Sbjct: 361 DSTLALLVCVKTIDKLGLSRKMVCGVTMPCFGTSSRTYLNALSLMTSLEIRIRKIDITKA 420 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 N F + ++ + EN+Q+R R ILM L+N +++ TS+ SE+++G+ T Sbjct: 421 CNQHFKDIGH--GDDIHDLTYENVQARERTQILMDLANQLNGIVIGTSDMSELALGWTTY 478 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP--- 475 GD + + KT V L W + + L +++ I+ S EL P Sbjct: 479 NGDHMSMYGINAGIPKTLVCYLVKWIAA----TQLNESDKIVLSDIISTPISPELLPIDN 534 Query: 476 -----HQTDQESLPPYPILDDIIKRIVEN-----------EESFINN-DQEYNDETVRYV 518 Q+ ++ L PY + D + I+ + + +F + +++ + +R Sbjct: 535 KKQQIAQSTEDILGPYELHDFFLYHILRHGFTPSKIYFLAKHAFTDTYSEDFILKWMRVF 594 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + +++KR P G KI + + D P Sbjct: 595 YKRFFSNQFKRNCIPDGPKIGSVNLSPRGDWRMPSDA 631 >gi|291563820|emb|CBL42636.1| NAD+ synthetase [butyrate-producing bacterium SS3/4] Length = 643 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 130/638 (20%), Positives = 235/638 (36%), Gaps = 88/638 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + V D N + + +EA Q + +++F EL ++GY DL + + I Sbjct: 6 IRVAAATPDLKVADPVFNREQTWKMMQEAASQDVKILVFPELGLTGYTCSDLFLQDTLID 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L + D +G P + N + G ++ + K +LPNYSEF+ Sbjct: 66 QAKEELLWLLDASKDMDMLTFIGLPWMKDGKLYNVAAAIKDGELLGLVPKRHLPNYSEFY 125 Query: 125 EKRTFISG--------------YSNDPIVFRDIRL-----GILICEDIWKNSNICKHLKK 165 E R F G I+FR + +CED+W K Sbjct: 126 ELRHFNPGPVKPDVVEWGESLIPFGSKILFRCTNIPELIVAAELCEDVWTMDPPSVSHAK 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R ++ GQ + + IY N G+ +L+F G Sbjct: 186 AGATVIANCSASDETTGKAGYRETLIAGQSARLVCAYIYANAGEGESTQDLVFGGHDIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 + + + + F + + ++ M+ Sbjct: 246 EN-GNILAESERFKNGMITADIDLYRLKNERRRMTTCQPGAETEDYDYMDFTLNKTELTL 304 Query: 263 -----STMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 ++P E E + L+ + ++G+SGG+DS L I Sbjct: 305 KRYIDPAPFVPSNEKERTARCEEILTIQAMGLKKRLAHTGAKSAVVGISGGLDSTLALLI 364 Query: 312 AVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A +EN+ ++ +P T+ ++ +A K LG + I V+ F + Sbjct: 365 TARAFDMLGISRENILSVTMPCFGTTDRTYNNAVTLTKKLGATLREVNIRKAVSTHFEDI 424 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 + EN Q+R R ILM L+N + M++ T + SE+++G+ T GD + Sbjct: 425 GH--DPAIHDVTYENSQARYRTLILMDLANKTNGMVIGTGDMSELALGWATYNGDHMSMY 482 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQ 480 + KT V L + + T G L +V +L+ S EL P Q + Sbjct: 483 GVNASVPKTLVRHLVRY---YADTCGDKALADV-LNDVLDTPVSPELLPPEDGKISQKTE 538 Query: 481 ESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYK 528 + + PY + D + I+ + I Y D+ + + ++K Sbjct: 539 DLVGPYELHDFFLYYILRYGYHPAKIYRLAKIAFAGVYEDKVIYKWLNTFYRRFFAQQFK 598 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISNK---FRDHISE 561 R P G K+ + + D P + D + + Sbjct: 599 RSCLPDGPKVGSVAVSPRGDLRMPSDAARRIWMDEVEK 636 >gi|148378539|ref|YP_001253080.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A str. ATCC 3502] gi|153932876|ref|YP_001382927.1| NAD synthetase [Clostridium botulinum A str. ATCC 19397] gi|153935328|ref|YP_001386356.1| NAD synthetase [Clostridium botulinum A str. Hall] gi|148288023|emb|CAL82090.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A str. ATCC 3502] gi|152928920|gb|ABS34420.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A str. ATCC 19397] gi|152931242|gb|ABS36741.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum A str. Hall] Length = 638 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 131/633 (20%), Positives = 231/633 (36%), Gaps = 88/633 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ A V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIDNIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I +G P + + N V++ G I+ + K LPNYSEF+ Sbjct: 68 KALDGIHNICKYSIDKDVLIAIGSPLLYKNSLYNCAVVIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N + + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +L+AS +K R +V Q +Y + + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYVYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQLSQW 254 L + E +T E + ++ Sbjct: 248 NGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFQFAINDV 307 Query: 255 NYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E + +N +L + N K +IG+SGG+DS L Sbjct: 308 GDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLA 367 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +EN+ TI +P T+ ++ +A + K L + I D F Sbjct: 368 LLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQHF 427 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + ++ + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 428 KDIGH--DKDIHDVTYENVQARERTQILMDIANKEGGLVIGTGDLSELALGWCTYNGDHM 485 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 ++ + KT V L + + + + I IL+ S EL P Sbjct: 486 SMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEGNIV 541 Query: 477 QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + + + + I Y+ ET+ + Sbjct: 542 QKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFFT 601 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P F Sbjct: 602 QQFKRSAVPDGPKVGTISLSPRGDWRMPSDASF 634 >gi|291086857|ref|ZP_06344653.2| putative NH(3)-dependent NAD(+) synthetase [Clostridium sp. M62/1] gi|291077165|gb|EFE14529.1| putative NH(3)-dependent NAD(+) synthetase [Clostridium sp. M62/1] Length = 714 Score = 465 bits (1196), Expect = e-128, Method: Composition-based stats. Identities = 128/652 (19%), Positives = 240/652 (36%), Gaps = 102/652 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A V D+ N + R E + +++F EL ++ Y DL +K + Sbjct: 54 LRVAAATPEVKVADVQFNREEICRLIGEGREKKAKIMVFPELCLTAYTCGDLFIQKPLLT 113 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + L + T + VG P + + N + G I+ + KI +PNYSEF+ Sbjct: 114 AVKRELKALAAFTAGSDMLVFVGLPWEYNNKLYNVAAAIQNGCILGLVPKIWIPNYSEFY 173 Query: 125 EKRTFISG-YSNDPIVFRDIRL------------------GILICEDIWKNSNICKHLKK 165 E+R F + + F ++ G ICED+W + Sbjct: 174 ERRHFNPWEFGTVTVEFDGQKIPLGTKIIFSCKNVENLAVGAEICEDVWVLNPPSIAHAA 233 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +++GQ + + +Y N G+ +L+F G + Sbjct: 234 AGATVIVNCSASDETTGKADYRRSLISGQSARLLCAYVYANAGEGESTQDLVFGGQNIIA 293 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + + + + F + + ++ + M+ Sbjct: 294 EN-GNILRESRRFENETIYADIDLERLECERRRMTTYQTEGREDYLFVEFELDLDEEKTW 352 Query: 259 -----------------DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKV 295 + ++P E E + L+ + + Sbjct: 353 GEENGQEAKNSGYDSLERFVDPSPFVPGNEADRARRCEEILMIQAMGLKKRLVHTHCQNA 412 Query: 296 IIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 ++G+SGG+DS L + V A + + ++ +P T+ ++ +A + LG Sbjct: 413 VVGISGGLDSTLALLVTVKAFDMAGIPRSQIYSVTMPCFGTTDRTYNNACLLTRKLGATL 472 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I D VN F ++ + EN Q+R R +LM ++N + M++ T + SE Sbjct: 473 MEVDIRDAVNTHFRDINH--DPSVHDVTYENSQARERTQVLMDIANQAGGMVIGTGDMSE 530 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++G+ T GD + + KT V L + T G L V+ IL+ S Sbjct: 531 LALGWATYNGDHMSMYGVNASVPKTLVRHLVRY---FADTCGEEELKNVLL-DILDTPVS 586 Query: 471 AELRP-------HQTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETV 515 EL P Q ++ + PY + D + I+ + D Y+ +T+ Sbjct: 587 PELLPPEDNGTIAQKTEDLVGPYELHDFFLYYILRYGYHPGKIFRLAVFAFDGAYDRKTI 646 Query: 516 RYV----EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 + ++KR P G K+ + + D P R + E Sbjct: 647 LKWLKVFYRRFFNQQFKRSCLPDGPKVGSAAVSPRGDLRMPSDAVSRLWLEE 698 >gi|197303706|ref|ZP_03168743.1| hypothetical protein RUMLAC_02435 [Ruminococcus lactaris ATCC 29176] gi|197297226|gb|EDY31789.1| hypothetical protein RUMLAC_02435 [Ruminococcus lactaris ATCC 29176] Length = 636 Score = 465 bits (1196), Expect = e-128, Method: Composition-based stats. Identities = 132/626 (21%), Positives = 238/626 (38%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D+ N R EEA + +++F EL ++GY DL ++ Sbjct: 6 VKVAAATPDIRVADVEFNKENICRGIEEAEKANAKILVFPELCVTGYTCSDLFDHAVLLK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + T D + VG P + + N L+ G I+ + K LPNY EF+ Sbjct: 66 AAKKALLEIAEFTRDRDLLVFVGVPLEVDGKLYNVAAALNHGKILGLTTKTFLPNYGEFY 125 Query: 125 EKRTFISGYS--------NDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F G + I F D+ + ICED+W Sbjct: 126 EMRQFTPGPEKARYISFNGEEIPFGPQILFQAAEMEDLIVAAEICEDVWSPVPPSIGAAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + + +AS K R E++ GQ + + IY N G+ +L+F G + Sbjct: 186 EGATVIVNCSASDETIGKDTYRRELIAGQSARLIAGYIYANAGEGESTTDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + + + +E+ ++ + + Sbjct: 246 ENGTILK-ESGRYRNEIIYSEFDLERITGERRKNTTFQTAKERSLIRVGFQIEKGETSLT 304 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 ++P E E + L+ + N ++G+SGG+DS L + Sbjct: 305 RTFPKKPFVPSDEQTRAARCEEILTIQAMGLKKRLAHTNARTAVVGISGGLDSTLALLVT 364 Query: 313 VDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A K+++ + +P T+ ++ ++A +K +G +PI + VN F + Sbjct: 365 AKAFDMLGRDKKDILAVTMPCFGTTDRTYQNACEMSKKVGATLIEVPIAEAVNIHFRDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 E + EN Q+R R +LM L+N + M++ T + SE+++G+ T GD + Sbjct: 425 H--DPEDHSVTYENGQARERTQVLMDLANKTWGMVIGTGDMSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + L + +L+ S EL P Q ++ Sbjct: 483 VNASVPKTLVRHLVKYAADDTEDEQLRE----VLYDVLDTPVSPELLPPKDGDIAQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYGSEYKR 529 + PY + D + ++ + + EY+ ET+ + ++KR Sbjct: 539 LVGPYELHDFFLYFMLRFGYEPAKIYRLACSTFEGEYDRETILKWLKTFCRRFFSQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + D P Sbjct: 599 SCLPDGPKVGTVALSPRGDWRMPSDA 624 >gi|229496094|ref|ZP_04389816.1| glutamine-dependent NAD+ synthetase [Porphyromonas endodontalis ATCC 35406] gi|229316990|gb|EEN82901.1| glutamine-dependent NAD+ synthetase [Porphyromonas endodontalis ATCC 35406] Length = 647 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 145/637 (22%), Positives = 252/637 (39%), Gaps = 90/637 (14%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K+ +K+A A V D N+ + +A+ QG++++ F EL ++GY DL + Sbjct: 1 MKQGYVKVAAAVPYVKVADCYYNVERISEMVHQADAQGVEIVTFPELSVTGYTCGDLFLQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + ++A+ L DT D ++VG P + +E + NS V+ G+I+ K LPN Sbjct: 61 PFLLDEANAALCQLVRDTADTRTLVIVGMPVRVEEKLFNSAVVFQQGHILGAIPKTYLPN 120 Query: 120 YSEFHEKRTFIS-----------GYSNDP----IVFRDIR--LGILICEDIWKNSNICKH 162 Y EF EKR F G P I+FR R +GI ICED+W Sbjct: 121 YREFQEKRWFSPSDVLQYKTVRIGEHTVPIGRNILFRSGRVGIGIEICEDMWTPYTPGTR 180 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 L GA +F+L+AS K I++G S +YV+ G+ +L++ G + Sbjct: 181 LSLYGAHIIFNLSASNENAGKHNYLRSIISGLSSQGLCGYVYVSCGYGESSTDLVYTGKA 240 Query: 221 FCFDGQQQLAFQMKHFS--EQNFMTEWHYDQQLSQ------------------------- 253 F + ++ +MK F E+ +++ ++ Sbjct: 241 FISE-IGKIVKEMKRFEYCERMIVSDIDVSHVQTERLLNSSFKSAVSHFTQEELTEIPFA 299 Query: 254 -----------WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + T P + E + V L ++ +IG+SGG Sbjct: 300 LRSEEESAPVDRPIERNPFMPTGVDPDERCEEMFQIQVCGLVQRLRHMKAEHAVIGISGG 359 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS L + V A N+ + +P TS ++ E+A + LG + I + Sbjct: 360 LDSTLALLVTVRAFDILGLPHSNIIGVTMPGFGTSTRTRENAHKMMRHLGVTLQEIDITE 419 Query: 358 LVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F+ + E EN+Q+R R +LM ++N A ++ T + SEI++G+ T Sbjct: 420 ACMQHFAAIGH--DPEVHDTTYENVQARERTQLLMDIANRYNAPVIGTGDLSEIALGWCT 477 Query: 418 LYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH- 476 GD ++ + KT V + W + S + + +++ S EL P Sbjct: 478 YNGDHMSMYSVNATVAKTSVALIIDWHAR--VLSHGDEVLKKTLLDVVDTPISPELIPGV 535 Query: 477 ------QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRY----V 518 Q QE++ PY + D I + + + + + Y ++ Sbjct: 536 NGDEPHQKTQEAIGPYELHDFFIYHFLFKKNQPSKIFYLARVAFEGIYPPSVIKRYMLLF 595 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + +YKR P G K+ A S + P Sbjct: 596 FRRFFSQQYKRNCMPDGPKVGAVSLSPRGEWRMPSDA 632 >gi|295091182|emb|CBK77289.1| NAD+ synthetase [Clostridium cf. saccharolyticum K10] Length = 666 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 128/652 (19%), Positives = 240/652 (36%), Gaps = 102/652 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A V D+ N + R E + +++F EL ++ Y DL +K + Sbjct: 6 LRVAAATPEVKVADVQFNREEICRLIGEGREKKAKIMVFPELCLTAYTCGDLFIQKPLLT 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + L + T + VG P + + N + G I+ + KI +PNYSEF+ Sbjct: 66 AVKRELKALAAFTAGSDMLVFVGLPWEYNNKLYNVAAAIQNGCILGLVPKIWIPNYSEFY 125 Query: 125 EKRTFISG-YSNDPIVFRDIRL------------------GILICEDIWKNSNICKHLKK 165 E+R F + + F ++ G ICED+W + Sbjct: 126 ERRHFNPWEFGTVTVEFDGQKIPLGTKIIFSCKNVENLAVGAEICEDVWVLNPPSIAHAA 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +++GQ + + +Y N G+ +L+F G + Sbjct: 186 AGATVIVNCSASDETTGKADYRRSLISGQSARLLCAYVYANAGEGESTQDLVFGGQNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + + + + F + + ++ + M+ Sbjct: 246 EN-GNILRESRRFENETIYADIDLERLECERRRMTTYQTEGREDYLFVEFELDLDEEKTW 304 Query: 259 -----------------DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKV 295 + ++P E E + L+ + + Sbjct: 305 GEENGQEAKNSGYDSLERFVDPSPFVPGNEADRARRCEEILMIQAMGLKKRLVHTHCQNA 364 Query: 296 IIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 ++G+SGG+DS L + V A + + ++ +P T+ ++ +A + LG Sbjct: 365 VVGISGGLDSTLALLVTVKAFDMAGIPRSQIYSVTMPCFGTTDRTYNNACLLTRKLGATL 424 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I D VN F ++ + EN Q+R R +LM ++N + M++ T + SE Sbjct: 425 MEVDIRDAVNTHFRDINH--DPSVHDVTYENSQARERTQVLMDIANQAGGMVIGTGDMSE 482 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++G+ T GD + + KT V L + T G L V+ IL+ S Sbjct: 483 LALGWATYNGDHMSMYGVNASVPKTLVRHLVRY---FADTCGEEELKNVLL-DILDTPVS 538 Query: 471 AELRP-------HQTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETV 515 EL P Q ++ + PY + D + I+ + D Y+ +T+ Sbjct: 539 PELLPPEDNGTIAQKTEDLVGPYELHDFFLYYILRYGYHPGKIFRLAVFAFDGAYDRKTI 598 Query: 516 RYV----EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 + ++KR P G K+ + + D P R + E Sbjct: 599 LKWLKVFYRRFFNQQFKRSCLPDGPKVGSAAVSPRGDLRMPSDAVSRLWLEE 650 >gi|226328040|ref|ZP_03803558.1| hypothetical protein PROPEN_01931 [Proteus penneri ATCC 35198] gi|225203744|gb|EEG86098.1| hypothetical protein PROPEN_01931 [Proteus penneri ATCC 35198] Length = 422 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 174/426 (40%), Positives = 246/426 (57%), Gaps = 14/426 (3%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +KLK+A+AQLN VVGDI GN + + ++ DL++F+EL + GY PEDL+F+ Sbjct: 11 MSRKLKLAMAQLNWVVGDIEGNCERMLSTIK--AQEEADLVMFSELALCGYSPEDLLFRP 68 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 F Q C + + L+ + IVVG P + N++ G + A K LPNY Sbjct: 69 DFQQRCETQLTRLEQASKK--TAIVVGHPWWQNGKIYNALSFFYKGELQARYFKQQLPNY 126 Query: 121 SEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY 180 F EKR F G + F+ LG+LICEDIW + LK+ GA+ + S+NASPY Sbjct: 127 GVFDEKRYFQQGNERCVVPFKGYHLGLLICEDIW-INEPIDALKQAGADLVLSINASPYN 185 Query: 181 HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQN 240 K R +++ HLP+IY+NQ+GGQDEL+FDG S FD + + ++ F EQ Sbjct: 186 REKPHVRTQLIKEHCQRTHLPVIYLNQIGGQDELVFDGCSKVFDERGAITHRLAAFDEQT 245 Query: 241 FMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLS 300 + E+ + + + L Y A VL+ RDYV KN F I+GLS Sbjct: 246 TIVEFDELNIIPMVDPAPE---------LSPLAQVYQALVLATRDYVIKNGFKGAILGLS 296 Query: 301 GGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 GGIDS L AIA DALGKE+VQ +M+P++YTS S+ DA A LG ++D + I + + Sbjct: 297 GGIDSGLTVAIAADALGKESVQAVMMPFRYTSEMSIHDAKEQADLLGVEFDTVSIEPMFD 356 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + ++ ++ + EN+Q+R R ILMA+SN + ++LTTSNKSE +VGY TLYG Sbjct: 357 AFMAQLAPMFKDTAADTTEENLQARCRAVILMAMSNKRRRLVLTTSNKSESAVGYSTLYG 416 Query: 421 DMSGGF 426 DM+GGF Sbjct: 417 DMAGGF 422 >gi|15894337|ref|NP_347686.1| NAD synthetase [Clostridium acetobutylicum ATCC 824] gi|15023963|gb|AAK79026.1|AE007620_7 NH(3)-dependent NAD(+) synthetase [Clostridium acetobutylicum ATCC 824] gi|325508465|gb|ADZ20101.1| NAD synthetase [Clostridium acetobutylicum EA 2018] Length = 636 Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 133/634 (20%), Positives = 234/634 (36%), Gaps = 90/634 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KI+ A V D+ N+ + ++A +++F EL I+ Y DL + + I Sbjct: 6 VKISSACPKTNVADVDFNVKNIKLCIDKALADNSKVVVFPELSITSYTCGDLFGQSTLIN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L D +VVG P + N +L G+I+ + K +PNY EF+ Sbjct: 66 NSLKGIKELCDFLIDKDIVVVVGAPLLYNYCLYNCAYVLFNGSILGIVPKSYIPNYVEFY 125 Query: 125 EKRTFISGYS----------------NDPIVFR--DIRLGILICEDIWKNSNICKHLKKQ 166 EKR F G + ++FR D++LGI ICED+W +L Sbjct: 126 EKRWFTEGLNLKGQFAQFPFQQDVPFGCDLIFRCGDLKLGIEICEDLWAPIPPSSYLSLM 185 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +++AS +K R +++ Q IY + + +++F G + Sbjct: 186 GANVILNISASNEVVSKADYRRSLISNQSGRCMCSYIYSSAGVFESSTDVVFSGHLLICE 245 Query: 225 GQQQLAFQMKHFSEQNFMTE-------------------------------WHYDQQLSQ 253 + L+ + F N + ++ Sbjct: 246 NGRILS-ENDRFERDNLVLTSMIDLEKLQSERLKNSTFKDSVRLCDFKPNYIDFNLSNWD 304 Query: 254 WNYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 S ++P E + +N L + +IG+SGG+DS L Sbjct: 305 IGDFDRFIDSHPFVPSNERQREERCKEIFNIQTAGLAKRFTHTGLKRAVIGISGGLDSTL 364 Query: 308 CAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V ++N+ T+ +P T+ ++ +A K LGC + + I Sbjct: 365 ALVVTVKTFDMLGIDRKNIITVTMPGFGTTDKTYNNAVDLCKHLGCDFREIDIVPACLLH 424 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F ++ EE + EN+Q+R R ILM ++N +L+ T + SE+++G+ T GD Sbjct: 425 FKDINHP--EEKHDVTYENVQARERTQILMDIANKEGGLLIGTGDLSELALGWCTYNGDH 482 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------- 475 + + KT V L + +T IL S EL P Sbjct: 483 MSMYAVNCSIPKTLVRYLVDYVAEKELTG----EVSKTLIDILNTPVSPELLPKDAKGNI 538 Query: 476 HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYV----EHLLY 523 Q ++ + PY + D + ++ + Y+ ET+ + Sbjct: 539 SQKTEDIIGPYELHDFFLYYFIKQGSEPEKIIFMAEKAFKNTYSRETIEKWFNLFIKRFF 598 Query: 524 GSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P + Sbjct: 599 NQQFKRSAIPDGPKVGTISLSPRGDLRMPSDASY 632 >gi|253681569|ref|ZP_04862366.1| NAD(+) synthase (glutamine-hydrolyzing) [Clostridium botulinum D str. 1873] gi|253561281|gb|EES90733.1| NAD(+) synthase (glutamine-hydrolyzing) [Clostridium botulinum D str. 1873] Length = 638 Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 142/636 (22%), Positives = 242/636 (38%), Gaps = 88/636 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 +K +K+A A VGDI NI ++ + ++ LI+ EL I+GY DL ++ Sbjct: 1 MKFIKVASACPVVNVGDIKFNIENIKKCINLSIKENSKLIVLPELSITGYTCADLFLNQT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ I + + + + I VG P + N I+ G I+ + K LPNYS Sbjct: 61 LIEESIEGIKDICNFSLNKDILISVGAPILYNYCLYNCAYIIYNGKILGIVPKSYLPNYS 120 Query: 122 EFHEKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F GY+ N + + G ICED+W +L Sbjct: 121 EFYEKRWFTEGYNIIDKKVDLYFQKDIPFGVNLIFSSGNFKFGFEICEDLWTVIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R IV+ Q + +Y + + +++F G Sbjct: 181 VLMGANIIGNLSASNELVSKADYRTSIVSSQSARCMCSYVYASSGVFESTTDVVFSGHLI 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQL 251 + + L + E +T E + + Sbjct: 241 ISENGKILCENNRFQRENEVITSIIDIDKLNNMRIKNLSFRDSKGTCPFTPFEIDFKFKN 300 Query: 252 SQWNYMSDDSASTMYIPLQEEEA------DYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + + ++P E E +N L + KVI+G+SGG+DS Sbjct: 301 TSIDVFDRPIHKHPFVPASEHEREIRSKEIFNIQSAGLAKRLSHTKLEKVIVGISGGLDS 360 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L +AV+ ++N+ TI +P T+ ++ +A K LG + + I + Sbjct: 361 TLALLVAVNTFDLLKIPRKNIITITMPGFGTTDRTYNNAVELCKKLGTDFREINIVNSCL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + E + EN+Q+R R ILM L+N A+L+ T + SEI++G+ T G Sbjct: 421 QHFKDIGHPA--EIHDVTYENVQARERTQILMDLANKEGALLIGTGDLSEIALGWATYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + H + I IL S EL P Sbjct: 479 DHMSMYSVNCSIPKTLVRYLVQFVAEHESEDNISE----ILIDILNTPVSPELLPKDKNG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYND----ETVRYVEHL 521 Q ++ + PY + D + + + +Y++ + + Sbjct: 535 KITQKTEDIVGPYELHDFFLYYFIGQNATPEKILLLAKEAFKNDYDENTIKKWLDKFIRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 + ++KR P G K+ S D P + Sbjct: 595 FFTQQFKRSAMPDGPKVGTISLSPRGDLKMPSDASY 630 >gi|323693750|ref|ZP_08107947.1| glutamine-dependent NAD+ synthetase [Clostridium symbiosum WAL-14673] gi|323502201|gb|EGB18066.1| glutamine-dependent NAD+ synthetase [Clostridium symbiosum WAL-14673] Length = 641 Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 127/635 (20%), Positives = 243/635 (38%), Gaps = 85/635 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + V D+ N + E +G +++F EL ++GY +L +K + Sbjct: 8 IRVAASTPEVKVADVEYNREQICCRIIEGRERGAKIMVFPELVLTGYTCGELFNQKPLLT 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L T + G P + + N+ + G ++A+ K+ LPNYSEF+ Sbjct: 68 KAREELKKLVDFTAGSDMLVFAGVPWEYNNKLYNTAAAIQDGELLALIPKMCLPNYSEFY 127 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R F G+ V ++ +G ICED+W + Sbjct: 128 ELRYFNPGFEKPVAVPWEDGYVLMGSKILFNCANVENLVVGAEICEDVWVLNPPSIGHAS 187 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +++GQ + + IY N G+ +L+F G + Sbjct: 188 AGATVIVNCSASDETTGKSDYRRSLISGQSARLLCGYIYANAGEGESTQDLVFGGQNIIA 247 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + + F + + ++ + M+ Sbjct: 248 ENGTML-AESRRFENETVYADMDLERLECERRRMTTYQTAGRENYVFIDFSLHEDENRPE 306 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + ++P E E + + L+ ++ +IG+SGG+DS L + Sbjct: 307 RFIDPSPFVPQDEESRNRRCEEILSIQAMGLKKRLKHTGCRSAVIGISGGLDSTLALLVT 366 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A ++ + + +P T+ ++ +A K LG + I D V + F + Sbjct: 367 VRAFDLLGLARDKIICVTMPCFGTTDRTYHNACYLTKKLGASLLEVDIKDAVANHFRDIG 426 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + EN Q+R R +LM ++N M++ T + SE+++G+ T GD + Sbjct: 427 H--DSSVHDVTYENSQARERTQVLMDIANKYNGMVIGTGDMSELALGWATYNGDHMSMYG 484 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQ 480 + KT V L + T G L+EV+ +L+ S EL P Q + Sbjct: 485 VNSSVPKTLVRHLVRY---FADTCGEKELSEVLL-DVLDTPVSPELLPPEKDGKIAQKTE 540 Query: 481 ESLPPYPILDDIIKRIVE--------NEESFINNDQEYND----ETVRYVEHLLYGSEYK 528 + + PY + D + I+ + I + Y++ + ++ + ++K Sbjct: 541 DLVGPYELHDFYLYYILRYGYHPGKIYRLAVIAFEGVYDNAVILKWLKVFYRRFFSQQFK 600 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 R P G K+ + + D P R + E Sbjct: 601 RSCLPDGPKVGSAAVSPRGDLRMPSDACSRLWLEE 635 >gi|153953617|ref|YP_001394382.1| NAD synthetase [Clostridium kluyveri DSM 555] gi|219854239|ref|YP_002471361.1| hypothetical protein CKR_0896 [Clostridium kluyveri NBRC 12016] gi|146346498|gb|EDK33034.1| NadE [Clostridium kluyveri DSM 555] gi|219567963|dbj|BAH05947.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 638 Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 131/636 (20%), Positives = 238/636 (37%), Gaps = 88/636 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + ++IA A V DI N+ + ++A + L++F EL ++ Y DL ++ Sbjct: 4 MDFIRIAAACPLTNVADIEFNLNNIKICIDKALTEKSKLVVFPELSMTSYTCADLFEQQL 63 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 ++ + A+ L + D I VG P + N ++ G ++ + K +PNY Sbjct: 64 LLEKSTEALKNLCDYSKDKDILIAVGAPLVFNYCLYNCAYVIFNGELLGIVPKSYIPNYE 123 Query: 122 EFHEKRTFISG-----YSNDPIVFRDIRLGI-------------LICEDIWKNSNICKHL 163 EF+EKR F G D + I G+ ICED+W +L Sbjct: 124 EFYEKRWFTEGLHIIDERVDLYFQKGIPFGVNLIFTCGKFKFAFEICEDLWAVIPPSSYL 183 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V+ Q + +YV+ + +L+F G Sbjct: 184 TLMGANIIGNLSASNEIVSKSFYRRNLVSSQSARCMCSYMYVSSGVFESSTDLVFSGDLC 243 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEW------------------------------HYDQQL 251 + L + + +T + + Sbjct: 244 ICENGTLLKANERFNRDNEVITSIVDLGRLNNQRLKNVSFRDNVKKCSQRPVNIEFQFEN 303 Query: 252 SQWNYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + ++P E +N +L V N K +IG+SGG+DS Sbjct: 304 LDCGEFDRNIDKHPFVPSNEYEREARCREIFNIQTSALAKRVSHTNLKKAVIGISGGLDS 363 Query: 306 ALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V ++N+ TI +P T+ ++ +A + K LG ++ + I D Sbjct: 364 TLALLVTVKTFDVLKISRKNIITITMPGFGTTDRTYNNAVSLCKNLGTEFREINIVDACL 423 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F +S + + EN+Q+R R I+M ++N + + T + SE+++G+ T G Sbjct: 424 QHFKDISH--NRDIHDVTYENVQARERTQIIMDIANKEGGLAIGTGDLSELALGWCTYNG 481 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D + + KT V L + ++ +G I +L S EL P Sbjct: 482 DHMSMYGVNCSVPKTLVRYLVRYVADREVSKNIGD----ILIDVLNTPVSPELLPKGKDG 537 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEESFI--------NNDQEYN----DETVRYVEHL 521 Q ++ + PY + D + V + S +Y+ ++ + Sbjct: 538 EISQKTEDIVGPYELHDFFLYYFVRHNYSHKKILFLAKHAFKDDYDISTIEKWLNMFIRR 597 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 + ++KR P G K+ S D P F Sbjct: 598 FFTQQFKRSAIPDGPKVGTVSLSPRGDWRMPSDASF 633 >gi|291523610|emb|CBK81903.1| NAD+ synthetase [Coprococcus catus GD/7] Length = 638 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 132/625 (21%), Positives = 230/625 (36%), Gaps = 82/625 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A + V D N A A EA QG+ L++ EL ++GY DL ++S + Sbjct: 6 LRVAAATPDIRVADCNFNGASAAALVSEAYEQGVSLLVLPELCLTGYTCSDLFLQESLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ TL T D ++ G P + N +L G+I+ K LP YSEF+ Sbjct: 66 GAGKALLTLTEATRDKNMVVLAGLPLTVNGVLYNVAAVLHDGDILGFVPKSYLPTYSEFY 125 Query: 125 EKRTFISGYSNDP-IVFRD------------------IRLGILICEDIWKNSNICKHLKK 165 E R + SG + ++F LGI ICED+W Sbjct: 126 EGRHYHSGADIETDVLFNGRTYPFGTRLLFRCRQMPAFTLGIEICEDLWVAQPPSISHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R +V+GQ + + IY + G+ +L+F + Sbjct: 186 AGATVIANLSASDETTGKDIYRRSLVSGQSARLVCGYIYADAGEGESSTDLVFGAHNLIC 245 Query: 224 DGQQQLAFQ---------------------------MKHFSEQNFMTEWHYDQQLSQWNY 256 + LA F + ++ + Sbjct: 246 ENGSILAESERFSNQMIMADMDMSKLISERRRMTTWQPKFDNGYRVIDFDLEMHEVDLRR 305 Query: 257 MSDDS---ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 D + E + L+ + + ++G+SGG+DS L + V Sbjct: 306 FIDPHPFVPDDAMDRTRRCEEILTIQAMGLKKRLAHTHCRHAVVGISGGLDSTLALLVTV 365 Query: 314 DA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A + + + + +P T+ ++ +A + LG + + I + V FS + Q Sbjct: 366 RAFDMLDMDRSQIMAVTMPCFGTTDRTYHNACELVRRLGATLEEVDIKEAVTLHFSDIGQ 425 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + EN Q+R R +LM ++N M++ T + SE+++G+ T GD + Sbjct: 426 --DPANHDVTYENGQARERTQVLMDIANRLGGMVIGTGDMSELALGWATYNGDHMSMYGV 483 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQES 482 + KT V L + + L IL+ S EL P Q ++ Sbjct: 484 NASVPKTLVRHLVRYCADTADSQTLKET----LLDILDTPVSPELIPPEDGQISQKTEDL 539 Query: 483 LPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYKRR 530 + PY + D + I+ + + Y+ T+ + ++KR Sbjct: 540 VGPYELHDFFLYHILRFGRHPAKVYRLALKAFEGVYDAATILRWLKTFYRRFFAQQFKRS 599 Query: 531 QAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 600 CLPDGPKVGSVAVSPRGDLRMPSDA 624 >gi|303327761|ref|ZP_07358201.1| glutamine-dependent NAD+ synthetase [Desulfovibrio sp. 3_1_syn3] gi|302862122|gb|EFL85056.1| glutamine-dependent NAD+ synthetase [Desulfovibrio sp. 3_1_syn3] Length = 552 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 184/575 (32%), Positives = 287/575 (49%), Gaps = 44/575 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q N V GD+AGN + A +A R+G DL + EL + G P + F Q Sbjct: 1 MKIALLQCNSVTGDVAGNQERILEAARQAAREGADLCVTPELALCGVAPGHYLRAVDFAQ 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ---DQEGVLNSVVILDAGNIIAVRDKIN---LP 118 C +A+ L DG ++VG P + N+ V++D G K+ Sbjct: 61 GCRTALRNLAEALKDGPP-LLVGAPVPSVYAAGLLSNAGVLVDKGQWQVASRKVYQNMGR 119 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICED-------IWKN-----SNICKHLKKQ 166 N + + R F G S + RLG+++CED WK N L ++ Sbjct: 120 NSGQDDDVRYFDRGVSCGILSLGGWRLGVVLCEDAVAEDGAFWKTQYASGHNPLMELVQR 179 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQ 226 G + + + A+PY + +++ + H+ + VN GG D +++G S FD Sbjct: 180 GVDAVVHMAAAPYCVGAQEAGEHMLSHVAARHHIHLFSVNPAGGNDSRVYNGQSLAFDPT 239 Query: 227 QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDY 286 QL + K F+E + + + S + EEA + A L RD+ Sbjct: 240 GQLLARGKAFAEDVLVVD------------TARGSGRVEELCRSAEEAGWRALTLGTRDF 287 Query: 287 VQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 V+K + I+GLSGG+DSAL IAV+ALG + V +++P YTS SL DA A L Sbjct: 288 VRKCGAERAILGLSGGMDSALVCCIAVEALGADKVTGVLMPSPYTSEDSLTDARRLADNL 347 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPS---GIVAENIQSRIRGNILMALSNHSKAMLL 403 G +LPI L+ F + + L P + EN+Q+RIRG +L +L+N ++A++L Sbjct: 348 GVSTVILPIEPLMQAFEATLKPGLDLFPPYAGEVTFENVQARIRGTLLTSLANRARALVL 407 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T NKSE ++GY TLYGD G + DL K+QV+ +A W N+H E+IP + Sbjct: 408 NTGNKSEGAMGYCTLYGDAVGALGVIADLTKSQVYAVARWYNAHRG-------AEIIPRN 460 Query: 464 ILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLY 523 + +K+PSAELRP Q D +S+PPY LD +++ ++E + D+ +D R V L+ Sbjct: 461 VFDKAPSAELRPGQKDADSIPPYEELDPMLEELLEP--TAQGQDKPMSD-VCREVRDKLF 517 Query: 524 GSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 +E+KRRQ P+ ++ FG P++ ++R Sbjct: 518 RAEFKRRQEPLALHVSRVPFGAGWQAPVAGRYRLP 552 >gi|168181474|ref|ZP_02616138.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum Bf] gi|237793865|ref|YP_002861417.1| NAD synthetase [Clostridium botulinum Ba4 str. 657] gi|182675243|gb|EDT87204.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum Bf] gi|229260685|gb|ACQ51718.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum Ba4 str. 657] Length = 638 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 134/633 (21%), Positives = 230/633 (36%), Gaps = 88/633 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++++ A V DI NI ++ + + LI+F EL I+ Y +L + I Sbjct: 8 IRVSTACPVTNVADIDFNIENIKKCIDICIEKKSKLIVFPELCITSYTCGELFSQSLLIS 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + + D I VG P + + N VI+ G I+ + K LPNYSEF+ Sbjct: 68 KTLEGIHNICKYSIDKDVLIAVGAPLLYKNSLYNCAVIIFGGKILGIVPKSYLPNYSEFY 127 Query: 125 EKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 EKR F GY N + + +CED+W +L Sbjct: 128 EKRWFTEGYKIKSERINLPFQKNIPFGVNLIFSDKIFKFAFEVCEDLWVTIPPSSYLALM 187 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA + +L+AS +K R +V Q IY + + +L+F G + Sbjct: 188 GANIIGNLSASNEIVSKSDYRRNLVASQSGRCLASYIYSSSGVYESSTDLVFSGHLLIGE 247 Query: 225 GQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQLSQW 254 L + E +T E + ++ Sbjct: 248 NGSILKENKRFQRENEVITSIIDIDKINSERLKNVSFTDNSMNMNLELEEITFKFAINDI 307 Query: 255 NYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P E + +N +L + N K +IG+SGG+DS L Sbjct: 308 GDFDRPIDKYPFVPSNEEERAVRCKEIFNIQTSALAKRLDHTNMKKAVIGISGGLDSTLA 367 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +EN+ TI +P T+ ++ +A + K L + I D F Sbjct: 368 LLVIAKTFDKLNIPRENIITITMPGFGTTDRTYNNAVSLCKHLNTTLKEINIVDAALQHF 427 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN+Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 428 KDIGH--DKYIHDVTYENVQARERTQILMDIANKESGLVIGTGDLSELALGWCTYNGDHM 485 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------H 476 ++ + KT V L + + + + I IL+ S EL P Sbjct: 486 SMYSVNCSIPKTLVRYLVRYVAENEVAKEISE----ILIDILDTPVSPELLPKDKEGNIA 541 Query: 477 QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + + + + I Y+ ET+ + Sbjct: 542 QKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAKIAFKDSYDKETIDKWFSYFIRRFFT 601 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P F Sbjct: 602 QQFKRSAVPDGPKVGTISLSPRGDWRMPSDASF 634 >gi|317050601|ref|YP_004111717.1| NAD+ synthetase [Desulfurispirillum indicum S5] gi|316945685|gb|ADU65161.1| NAD+ synthetase [Desulfurispirillum indicum S5] Length = 632 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 138/636 (21%), Positives = 242/636 (38%), Gaps = 89/636 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 ML +IA A V D+A N A+ A++Q +++F EL ++GY DL ++ Sbjct: 1 MLGFYRIATALPGLRVADVAWNRAQIEELAIRAHQQQCAVVVFPELSLTGYTCADLFHQE 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S +QA A+++L + + +VVG P Q + N +++ G+I+ K +LPN Sbjct: 61 SLLQAVRKALESLCRFSRELDTALVVGAPLPQQGRLYNCALVIQRGHILGAVPKTHLPNK 120 Query: 121 SEFHEKRTFIS------------GYSNDPI----VFR---DIRLGILICEDIWKNSNICK 161 EF+E+R F G + P +FR I +CED+W Sbjct: 121 REFYERRWFTPASALPENSTITIGDDSVPFGSRLIFRCDQHYAFAIELCEDLWSVIPPSS 180 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 GA + + +AS K R E+V Q + Y G+ +L+F G Sbjct: 181 SHALAGATVILNPSASNELVAKADYRRELVQNQSARCLAAYAYAGSGIGESSTDLLFGGH 240 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP----------- 268 + + + F N + D Q MS+ S + IP Sbjct: 241 HLLCEN-GLVLEESPRFERGNHLFSADVDCQKLSQLRMSETSFADNPIPTGYRTIPLHPV 299 Query: 269 -----------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + E ++ +L ++ K IIG+SGG+DS Sbjct: 300 LPIGELQRYIPPHPFVPGDPQRRDERCEEIFSIQTAALAKRLKHIGSPKAIIGISGGLDS 359 Query: 306 ALCAAI-----AVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + A+ ++ I +P T+ ++ E+A KAL + + I Sbjct: 360 TLALLVTHRTFALLERNPSDIIAITMPGFGTTNRTYENAVTLCKALETDFREIAISQASL 419 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F L+ + EN+Q+R R ILM ++N +++ T + SEI++G+ T G Sbjct: 420 EHFKLIGH--DPAIHDVTYENVQARERTEILMNIANKHGGIVIGTGDLSEIALGWSTYNG 477 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT + L W S + E + I+ + EL P Sbjct: 478 DHMSMYSVNCGVPKTLIRYLVEWVASRSEDAM-----EELLMDIVNTPITPELLPRDEQK 532 Query: 476 --HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHL 521 Q ++ + PY + D + V+ + + +Y++ ++ Sbjct: 533 ECTQKTEDIIGPYELHDFFLYHTVKYGASTPKVRHLAALAFAGKYDEASIARWHEIFVKR 592 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 + ++KR P G K+ + D P F Sbjct: 593 FFTQQFKRSCIPDGPKVGTIALSPRGDWRMPSDASF 628 >gi|313157073|gb|EFR56503.1| NAD+ synthase [Alistipes sp. HGB5] Length = 526 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 173/554 (31%), Positives = 288/554 (51%), Gaps = 29/554 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLN +GDI GN +K + +A Q DL++F E +SG P DL+ K +F++ Sbjct: 1 MKIAIAQLNYTIGDIDGNASKIIDSINKAKAQRADLVIFAEQAVSGTPAFDLLRKTTFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A+ + S G +VG P +EG +++ ++ ++ K + + Sbjct: 61 LCEDALVEIASCC--DGIAAIVGLPILTREGTISAAALIQDRKVLRYVGKKYI---TARR 115 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E + + + + I++ +D+ + + + E + S+NA Y + Sbjct: 116 EMGFLVPSKGFEYATIKGHKCAIIVGDDLSREHDF-----DKSVETVISINARKYGKGAM 170 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R++++ I+ VNQVGG ++++DG S F+ + +L MK F E + + Sbjct: 171 TYRYDMMRHLSFVEAKNIVLVNQVGGATDIVYDGTSGAFNNRGELVLMMKQFEEDFQIFD 230 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 +D + Y A LRD+ KN + K IGLSGGID Sbjct: 231 TKAQNPPVGVPSTYNDRTRMV----------YQAARCGLRDFFLKNGYKKACIGLSGGID 280 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+ A +A DALG NV+ ++LP +++S S+EDA A+ LG +Y+V+PI ++ + Sbjct: 281 SAVVACLAADALGAGNVRALLLPSQFSSDHSVEDAKKLAENLGIEYNVIPITEIYTSVVN 340 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + ENIQ+RIR +LMA+ N + +LL +SNKSE ++G TLYGD +G Sbjct: 341 TLKPVIGGREFDATEENIQTRIRTVLLMAVQNKTDYILLNSSNKSENALGLCTLYGDTAG 400 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 F+P DLYK++++ +A + N VIP +IL+K PS+EL P Q D + LP Sbjct: 401 AFSPTGDLYKSEMYDVARYINRT--------FGNVIPENILDKEPSSELHPGQKDSDILP 452 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY ++D I+ R++E + + ++ E V + ++ +E KR Q P +++ SF Sbjct: 453 PYEVVDAILLRMIEEGQHREEIVNAGFDSEVVEKIHCMIMRNEKKRYQFPPVLRLSMCSF 512 Query: 544 GRDRLYPISNKFRD 557 G +RL P++NK+ D Sbjct: 513 GHERLMPLTNKYGD 526 >gi|331082722|ref|ZP_08331845.1| hypothetical protein HMPREF0992_00769 [Lachnospiraceae bacterium 6_1_63FAA] gi|330400341|gb|EGG79983.1| hypothetical protein HMPREF0992_00769 [Lachnospiraceae bacterium 6_1_63FAA] Length = 637 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 123/626 (19%), Positives = 239/626 (38%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + +E + G +++F EL I+GY DL F ++ +Q Sbjct: 6 IKVAAATPQIEVADCIHNTQEIVKKAKEMSAAGARILVFPELCITGYTCHDLFFNETLLQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L + D I VG P + + N+ ++ G I+ + K ++PNY EF+ Sbjct: 66 SAKKQLLVLAEELKDTEGLIFVGLPLEYNGKLYNTAAAINRGEILGIIPKHSIPNYGEFY 125 Query: 125 EKRTFISGYS--------------NDPIVFRD-----IRLGILICEDIWKNSNICKHLKK 165 E R F SG ++F + + + ICED+W ++ Sbjct: 126 EARYFTSGRDIESEIKLGDKMVPFGSKVLFECEEMPQLCVAVEICEDVWTPASPGLFHAM 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R E++ GQ + + +Y G+ +L+F G + Sbjct: 186 AGANVIVNLSASDEIAGKSEYRRELIKGQSARLLCGYVYATAGNGESTQDLVFGGQNLIC 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + + F + + + +S Sbjct: 246 EN-GSLLAEAQLFKNETVYGVLDIQKLRGERRRISTWLEEKGEKHLHISFHLPMEETELY 304 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 ++ ++P + E + L+ ++ ++G+SGG+DS L + Sbjct: 305 NNFEKNPFVPDCDTERAKRCEEILTIQAMGLKKRMEHTKCKSAVLGISGGLDSTLALLVT 364 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A+ ++N+ + +P T+ ++ +A K LG + + I V F + Sbjct: 365 ARAMDFMGLDRKNITAVTMPCFGTTDRTYTNACELTKRLGAELLEVDIKKAVLQHFEDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + EN Q+R R ++M ++N M++ T + SE+++G+ T GD + Sbjct: 425 HDYN--VHDVTFENAQARERTQVIMDIANQQGGMVIGTGDFSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L H + + I +L+ S EL P Q ++ Sbjct: 483 VNGGVPKTMVRHLVR----HYVDTCQEEKLAEILRDVLDTPVSPELLPPKEGEIAQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDE----TVRYVEHLLYGSEYKR 529 + PY + D + ++ + Y +E ++ + ++KR Sbjct: 539 LVGPYELHDFFLYYMLRFHFSPSKIYRIAKKTFAGIYTEEEILKWMKKCYWRFFSQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + S D P Sbjct: 599 SCLPDGPKVGSVSVSPRGDLRMPSDA 624 >gi|323484882|ref|ZP_08090237.1| hypothetical protein HMPREF9474_01988 [Clostridium symbiosum WAL-14163] gi|323401763|gb|EGA94106.1| hypothetical protein HMPREF9474_01988 [Clostridium symbiosum WAL-14163] Length = 641 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 126/635 (19%), Positives = 243/635 (38%), Gaps = 85/635 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + V D+ N + E +G +++F EL ++GY +L +K + Sbjct: 8 IRVAASTPEVKVADVEYNREQICCRIIEGRERGAKIMVFPELVLTGYTCGELFNQKPLLT 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + L T + G P + + N+ + G ++A+ K+ LPNYSEF+ Sbjct: 68 KAREELKKLVDFTAGSDMLVFAGVPWEYNNKLYNTAAAIQDGELLALIPKMCLPNYSEFY 127 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R F G+ V ++ +G ICED+W + Sbjct: 128 ELRYFNPGFEKPVAVPWEDGYVLMGSKILFNCANVENLVVGAEICEDVWVLNPPSIGHAS 187 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +++GQ + + IY N G+ +L+F G + Sbjct: 188 AGATVIVNCSASDETTGKSDYRRSLISGQSARLLCGYIYANAGEGESTQDLVFGGQNIIA 247 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + + F + + ++ + M+ Sbjct: 248 ENGTML-AESRRFENETVYADMDLERLECERRRMTTYQTAGRENYVFIDFSLYEDENRPE 306 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + ++P E E + + L+ ++ +IG+SGG+DS L + Sbjct: 307 RFIDPSPFVPQDEESRNRRCEEILSIQAMGLKKRLKHTGCRSAVIGISGGLDSTLALLVT 366 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A ++ + + +P T+ ++ +A K LG + I D V + F + Sbjct: 367 VRAFDLLGLARDKIICVTMPCFGTTDRTYHNACYLTKKLGASLLEVDIKDAVANHFRDIG 426 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + EN Q+R R +LM ++N M++ T + SE+++G+ T GD + Sbjct: 427 H--DSSVHDVTYENSQARERTQVLMDIANKYNGMVIGTGDMSELALGWATYNGDHMSMYG 484 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQ 480 + KT V L + T G L+EV+ +L+ S EL P Q + Sbjct: 485 VNSSVPKTLVRHLVRY---FADTCGEKELSEVLL-DVLDTPVSPELLPPEKDGKIAQKTE 540 Query: 481 ESLPPYPILDDIIKRIVE--------NEESFINNDQEYND----ETVRYVEHLLYGSEYK 528 + + PY + D + I+ + + + Y++ + ++ + ++K Sbjct: 541 DLVGPYELHDFYLYYILRYGYHPGKIYRLAVMAFEGVYDNAVILKWLKVFYRRFFSQQFK 600 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 R P G K+ + + D P R + E Sbjct: 601 RSCLPDGPKVGSAAVSPRGDLRMPSDACSRLWLEE 635 >gi|260438659|ref|ZP_05792475.1| glutamine-dependent NAD+ synthetase [Butyrivibrio crossotus DSM 2876] gi|292809253|gb|EFF68458.1| glutamine-dependent NAD+ synthetase [Butyrivibrio crossotus DSM 2876] Length = 635 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 133/625 (21%), Positives = 234/625 (37%), Gaps = 83/625 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A + V D N + +EA + + +++F EL ++GY DL + + ++ Sbjct: 6 IRCAAVSPDVTVADPLANELSIKAYMDEAAKNNVSVLVFPELCLTGYTCNDLFLQDTLLK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L T D VG P + N L G II + K NLP+YSEF+ Sbjct: 66 NSLDAVIRLAEYTKDKNFIAFVGLPFMYGNCLYNVAAALCDGRIIGLIPKKNLPSYSEFY 125 Query: 125 EKRTFISGYSNDP----------------IVFRDIR---LGILICEDIWKNSNICKHLKK 165 E R F G+ +DI +G ICED+W + Sbjct: 126 ETRHFTPGFDECVNITVGNCSVPFGSKLLFACKDIPSLVIGAEICEDVWVPLPPSINHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K + R ++++GQ + + IY N G+ +L+F G + Sbjct: 186 AGATVIVNCSASDETVGKDRYRRDLISGQSARLISAYIYANAGEGESTQDLVFGGHNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + + + K F + D+ ++ M+ Sbjct: 246 EN-GTVLAESKRFKNGIIYGDTDLDRLKNERRRMTTFPNVSKDYTTVYFSLAIKDLSLNR 304 Query: 262 --------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 S++ E + + L+ ++ +IG+SGG+DS L + V Sbjct: 305 FYNMTPFVPSSVEERELRCEEILSIQAMGLKKRLKHTGSKHAVIGISGGLDSTLALLVIV 364 Query: 314 DAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A +EN+ +P T+ ++ +A AL + I + VN F + Q Sbjct: 365 KAFDMLSIPRENIIAYTMPCFGTTDRTYNNACNLVAALHGTLKEVNIKNAVNIHFEDIGQ 424 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + I EN Q+R R ILM +N M++ T + SE+++G+ T GD + Sbjct: 425 --DPDKHDITYENCQARERTQILMDGANLYNGMVIGTGDLSELALGWATYNGDHMSMYAV 482 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQES 482 + KT V L + L L +L+ S EL P Q ++ Sbjct: 483 NSGIPKTLVRHLVRFYADTCNNDTLKNL----LMDVLDTPVSPELLPPVDGKISQKTEDL 538 Query: 483 LPPYPILDDIIKRIVE--------NEESFINNDQEYND----ETVRYVEHLLYGSEYKRR 530 + PY + D + I+ + I Y+D + ++ + ++KR Sbjct: 539 VGPYELHDFFLYYILRFGFAPDKIYRIAKIAFKDVYDDAVILKWLKVFYRRFFSQQFKRS 598 Query: 531 QAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 599 CLPDGPKVGSVAISPRGDLRMPSDA 623 >gi|167751854|ref|ZP_02423981.1| hypothetical protein ALIPUT_00096 [Alistipes putredinis DSM 17216] gi|167660095|gb|EDS04225.1| hypothetical protein ALIPUT_00096 [Alistipes putredinis DSM 17216] Length = 527 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 172/552 (31%), Positives = 286/552 (51%), Gaps = 28/552 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+AQLN VGD+AGN K + A +G DL++F E ISG P DL+ K F++ Sbjct: 1 MKIALAQLNYTVGDVAGNTNKIIESVRRAKAEGADLVVFAEQAISGAPSFDLLRKNPFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A+ + ++ A +VG P +EG +++ ++ G ++ K N+ + Sbjct: 61 QCEDALMRIAAECDTVDA--IVGLPILTKEGTISAAALIQQGRVVRYVGKQNI---TVRR 115 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E + + R R +++ +D++ + + E + +++A Y L Sbjct: 116 ELGFLTPSKGCEYVTIRGCRCALVVGDDLFHTPDF-----DKSVETVINIHARRYRKGDL 170 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 +R++++ ++ VNQVGG EL++DG S D + +L +K F E Sbjct: 171 SRRYDVIRNIAYVKGKNVVMVNQVGGATELVYDGMSGVMDNRGKLVRLLKSFEE------ 224 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + ++ S +S Y A LRD+ KN + K +G+SGGID Sbjct: 225 -DFQVFDTENPACSVESVPVSV--NDRTRFIYEAACCGLRDFFVKNGYKKACVGVSGGID 281 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+ A +AV ALG ENV+ +M+P +++S S+EDA A+ LG ++ V+PI + Sbjct: 282 SAVVACLAVAALGAENVRGLMMPSQFSSEGSVEDAKQLAENLGIEFHVVPITEAYRSIVD 341 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + ENIQSRIR +LMAL N + +LL SNKSE ++G TLYGD G Sbjct: 342 TLIPVIGGTDFDATEENIQSRIRTLMLMALQNKNGYVLLNCSNKSENALGICTLYGDTGG 401 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 F+ DLYKT+++ LA + N IP +IL K PS+ELRP+Q D + LP Sbjct: 402 AFSVTGDLYKTEMYDLARYINRK--------FGAPIPENILTKEPSSELRPNQKDSDMLP 453 Query: 485 PYPILDDIIKRIVENEESFIN-NDQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 Y ++D I+ R++E+ +S + ++ + V+ + ++ +E KR Q P ++++ SF Sbjct: 454 SYEVVDAILYRLIEDGQSREEIINAGFDSDEVQKIYAMVMRNEKKRFQYPPVLRLSSSSF 513 Query: 544 GRDRLYPISNKF 555 G + P+++K+ Sbjct: 514 GHEYRMPLTHKY 525 >gi|224024676|ref|ZP_03643042.1| hypothetical protein BACCOPRO_01404 [Bacteroides coprophilus DSM 18228] gi|224017898|gb|EEF75910.1| hypothetical protein BACCOPRO_01404 [Bacteroides coprophilus DSM 18228] Length = 643 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 128/632 (20%), Positives = 236/632 (37%), Gaps = 89/632 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N +A A+ +G+ +++F EL ++GY DL ++ ++ Sbjct: 6 VKVAAAIPTVKVADCKFNAQQAETQIAIADGKGVQIVVFPELNLTGYSCGDLFGQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + ++T +VG P +LN V+ G I+ V K LPNY EF+ Sbjct: 66 QAELALMQIMNNTRQLDVISIVGMPVIVNSTLLNCAVVFQKGKILGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDP------------------IVFRDIRLGILICEDIWKNSNICKHLKKQ 166 E+R F ++ D+ G+ ICED+W L + Sbjct: 126 EQRWFAPSTAHPEDTMVRLCGQLVPVSSNMLFETSDVCFGVEICEDVWAPVPPSSLLALK 185 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GAE +F+++A K + ++ Q + ++ + G+ +++F G ++ Sbjct: 186 GAEIIFNMSADTENICKHQYLRSLLAQQSARCLAGYVFASSGFGESTTDVVFAGNGLIYE 245 Query: 225 GQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------ 271 LA + F +Q +TE ++ + + +AS Q Sbjct: 246 NGTLLAESERFSFKDQLVVTEIDVERLRGERLTNTTFAASVRMHAQQPARRVTAEMVTGR 305 Query: 272 ------------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 E ++ V L + V++G+SGG+DS L Sbjct: 306 DLMLTRYVEPHPFVPAGGALLDERCEEIFSIQVAGLAKRLVHTGCKTVVVGISGGLDSTL 365 Query: 308 CAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V K + + I +P T+ ++ +A +L + I D Sbjct: 366 ALLVCVKTFDKLGLSRKGIIGITMPGFGTTDRTYNNALTLMSSLQVTTKEISIKDACIQH 425 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + + + EN Q+R R ILM +N +++ T + SE+++G+ T GD Sbjct: 426 FQDIGHDMS--IHDVTYENSQARERTQILMDYANKVGGLVIGTGDLSELALGWATYNGDH 483 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 + + KT V L +W +G+ L+ I++ S EL P Sbjct: 484 MSMYGVNASIPKTLVRYLVNWVAQ----TGVDVLSRNTLLDIIDTPISPELIPADEHGNI 539 Query: 477 -QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLY 523 Q ++ + PY + D I + + Y+ T++ + Sbjct: 540 RQKTEDLVGPYELHDFFIYYFLRFGFRPAKIYWLAENAFRGTYDSTTIKKWLISFYRRFF 599 Query: 524 GSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 AQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 631 >gi|167753181|ref|ZP_02425308.1| hypothetical protein ALIPUT_01452 [Alistipes putredinis DSM 17216] gi|167659495|gb|EDS03625.1| hypothetical protein ALIPUT_01452 [Alistipes putredinis DSM 17216] Length = 644 Score = 462 bits (1188), Expect = e-127, Method: Composition-based stats. Identities = 144/629 (22%), Positives = 239/629 (37%), Gaps = 87/629 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+A A + + D N + +G +ILF EL I+ Y DL+ + + + Sbjct: 7 LKVAAAVPHVRIADCDYNAQHITELIRKGADRGASIILFPELCITSYTCGDLIQQPALLH 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + T + +VG P + N V+ G I V K +PNYSEF+ Sbjct: 67 AAEQALGYILAQTRELPIVAIVGMPVTYGNALYNCAVVFAQGRIHGVVPKTYIPNYSEFY 126 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E R F+SG ++ G+ ICED+W + H G Sbjct: 127 EARCFMSGEEIGLATIRMCGQDTDFGRNMLFNIGGVKFGVEICEDMWVPAAPSLHQAVDG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A+ LF+L+ASP K +V Q + IY + G+ +L+F G + Sbjct: 187 AQILFNLSASPEVLGKHNYLLTLVKSQSARTQSAYIYCSAGYGESSTDLVFGGNGLIVES 246 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + + F EQ + + ++ L+ + Sbjct: 247 GRMLR-RTERFSTEEQLIVADIDTEKLLNSRRRTTTFAPHRPAERIIVEIPLPENPANVT 305 Query: 259 --DDSASTMYIPLQEEEAD------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + S ++P EE D N + L +Q + KV+IG+SGG+DS L Sbjct: 306 LDREFNSHPFVPQTPEEMDESGREIINIQTMGLAQRLQHTDCKKVVIGVSGGLDSTLALL 365 Query: 311 IAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 IAV + + + + +P TS ++ ++ A + LG + I F+ Sbjct: 366 IAVRTFDRLGLDRKGIIGVTMPGFGTSNRTYRNSIALMRCLGITSREISIRKACEQHFAD 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + L E EN Q+R R ILM ++N M+L T + SE+++G+ T GD Sbjct: 426 IG--LNPEEQSSAYENAQARERTQILMDIANMEHGMVLGTGDLSELALGWATYNGDQMSM 483 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQT 478 + L KT + L W + I ++ S EL P Q Sbjct: 484 YGLNASLPKTLIQVLLRWMAQVCQDDAIRE----ILLDVVATPISPELLPSGEEGGIAQH 539 Query: 479 DQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVEHL----LYGSE 526 ++ + PY + D + ++N S D Y+ T+ + + + Sbjct: 540 TEKLVGPYELHDFFLYHFIQNGYSPAKILFAAETAFDGRYDRATILRWMRVFFQRFFSQQ 599 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYPISN 553 +KR P G K+ S D P Sbjct: 600 FKRSAMPDGPKVGIISLSPRGDWRMPSDA 628 >gi|332879220|ref|ZP_08446918.1| NAD+ synthase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682878|gb|EGJ55777.1| NAD+ synthase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 641 Score = 462 bits (1188), Expect = e-127, Method: Composition-based stats. Identities = 127/630 (20%), Positives = 229/630 (36%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA A VGD N + +A +G+++I F EL I+ Y DL ++ + Sbjct: 6 VRIATAIPGVKVGDCKYNAQQIESLIIQAEGKGVEIICFPELSITAYTCGDLFAQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + ++ T ++G P +LN ++ G I+ + K LPNY EF+ Sbjct: 66 EAEMCLISILDFTRSLDIISIIGLPVAYHGTLLNCAAVIQKGKILGLIPKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F SG + G+ ICED+W L QG Sbjct: 126 EQRWFTSGDVHGNSNVLICGQMVPLSRHLVFNTPSCCFGVEICEDVWAPIPPSSELVLQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K ++ Q + ++ G+ +++F G + ++ Sbjct: 186 AEIIFNLSADNEGVGKQDYLKALLAQQSARCLAGYVFSGAGFGESTQDVVFAGKALIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 LA + F EQ +E + ++ + SAS + + Sbjct: 246 GVLLAENERFSFKEQLVYSEIDVECLRAERRVNTTFSASVARLKSHDVIQIDTELFASKN 305 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E + + L + V+IG+SGG+DS L Sbjct: 306 IELSRKVNPMPFVPAGKALNGRCEEIFAIQIAGLAKRLVHTQTQTVVIGISGGLDSTLAL 365 Query: 310 AIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + K + + + +P T+ ++ +A K+LG + I F Sbjct: 366 LVCTKTFDKLGLSRKGIVGVTMPGFGTTNRTYTNAVNLMKSLGVTLREISIKKACIQHFE 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 ++ + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 426 DLN--FDMANHNVTYENAQARERTQILMDVANQMNGMVVGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + ++ I++ S EL P Q Sbjct: 484 MYGVNASIPKTLVKHLVKWVADSV----IDESSQATLLDIVDTPISPELIPADEDGNISQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEH----LLYGS 525 ++ + PY + D + + + +Y DET++ + Sbjct: 540 KTEDLVGPYELHDFFLYYTLRFGFRPSKIFYLTQYAFAGKYTDETIKKWLTTFFRRFFSQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSCSLSPRGDWRMPSDA 629 >gi|160941169|ref|ZP_02088506.1| hypothetical protein CLOBOL_06062 [Clostridium bolteae ATCC BAA-613] gi|158435730|gb|EDP13497.1| hypothetical protein CLOBOL_06062 [Clostridium bolteae ATCC BAA-613] Length = 659 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 126/656 (19%), Positives = 237/656 (36%), Gaps = 106/656 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A V D N + + +G+ L++F EL ++ Y DL +K+ ++ Sbjct: 6 LRVAAATPKVRVADPQYNAQQIMDLIGQGYSRGVKLMVFPELCLTAYTCADLFGQKALLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + T + +G P + + N+ + G +I V K NLPNYSEF+ Sbjct: 66 RAKEELGRIVRFTDGKDILVFLGLPWERDGKLYNAAAAIQKGRLIGVVPKRNLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVFRDI-------------------RLGILICEDIWKNSNICKHLKK 165 E R F G + + + ICED+W Sbjct: 126 EARNFCPGNERPVMTCWNGEKVPMGTNLLFRCNTMPELTVAAEICEDVWVPCPPSIRHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K RH+++ Q + + +Y N G+ +L+F G + Sbjct: 186 AGATVVVNCSASDETTGKDMYRHDLICSQSARLVCGYVYANAGEGESTQDLVFGGQNIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST------------------- 264 + L + + F ++ + ++ S+ MS Sbjct: 246 ENGTCL-VESRRFINESICADMDLERLDSERRRMSTFPDPAAAREEGGYLTVEFSFDAVS 304 Query: 265 ----------------------------MYIPLQEEEADYN------ACVLSLRDYVQKN 290 ++P E + + + L+ ++ Sbjct: 305 EDSAGSQDTQTHGSTQPGGDVLRYVDPAPFVPRDERQRNRRCEEILSIQAMGLKKRLEHT 364 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKA 345 H+ +IGLSGG+DS L + V A + + I +P T+ ++ +A A Sbjct: 365 GCHEAVIGLSGGLDSTLALLVTVRAFDSLRIPRSGIHCITMPCFGTTDRTYNNACTLAGK 424 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 +G K + I + V F + + + + EN Q+R R +LM ++N +++ T Sbjct: 425 VGAKLREINIREAVTRHFEDIGHDMDK--HDVTYENSQARERTQVLMDIANEVGGLVIGT 482 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 + SE+++G+ T GD + + KT V L + L + +L Sbjct: 483 GDMSELALGWATYNGDHMSMYGVNGSVPKTLVRHLVRYYADTCNEKELAD----VLLDVL 538 Query: 466 EKSPSAELRP------HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYN 511 + S EL P Q ++ + PY + D + I+ + +Y+ Sbjct: 539 DTPVSPELLPPEDGQISQKTEDLVGPYELHDFYLYYILRYGYAPSKIYRLAIQAFKSQYD 598 Query: 512 DETVRYV----EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 ET+ + ++KR P G K+ + + D P R + E Sbjct: 599 RETILKWLNVFYRRFFSQQFKRSCLPDGPKVGSVAVSPRGDLRMPSDASGRVWLEE 654 >gi|168186390|ref|ZP_02621025.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum C str. Eklund] gi|169295535|gb|EDS77668.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum C str. Eklund] Length = 637 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 140/643 (21%), Positives = 244/643 (37%), Gaps = 88/643 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +++A A VGD+ NI ++ + A + L+LF EL I+ Y DL ++ Sbjct: 1 MNFIRVASACPVVNVGDVKFNIQNIKKCIDLALNENSKLVLFPELSITSYTCADLFLNQT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I+ I + + I VG P + N I+ G I+ + K LPNYS Sbjct: 61 LIEKSMEGIKDICDFSLHKDILIAVGAPLLFNYSLYNCTYIIYNGKILGIVPKSYLPNYS 120 Query: 122 EFHEKRTFISGYS------------------NDPIVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G+ N + + ICED+W +L Sbjct: 121 EFYEKRWFTEGHDIISEKVNLPFQNDVPFGINLLFTSGNFKFAFEICEDLWTVIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R+ +V+ Q + +Y + + +++F G Sbjct: 181 ALMGANIIGNLSASNELVSKADYRNFVVSSQSARCMSSYVYASSGVFESTTDVVFSGHLM 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMT------------------------------EWHYDQQL 251 + + L + E +T E ++ + Sbjct: 241 IAENGKILKSNNRFQRENEVITSIIDVDKINNMRMKNLSFRDSKRACPFKPLEISFNFKD 300 Query: 252 SQWNYMSDDSASTMYIPLQEEEA------DYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + ++P E E +N L + KVI+G+SGG+DS Sbjct: 301 TNIGNFDRKINKHPFVPSNEHEREARSKEIFNIQSAGLAKRLNHTGLKKVIVGISGGLDS 360 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L +AV+ ++N+ TI +P T+ ++ +A K LG + + I + Sbjct: 361 TLALLVAVNTFDLLKLPRKNIITITMPGFGTTDRTYNNAVDLCKKLGTDFREINIVNSCL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + E + EN+Q+R R ILM L+N A+L+ T + SEI++G+ T G Sbjct: 421 QHFKDIGHPA--EIHDVTYENVQARERTQILMDLANKEAALLVGTGDLSEIALGWATYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + H + I IL+ S EL P Sbjct: 479 DHMSMYSVNCSIPKTLVRYLVKFSAEHNSEKNI----SHILMDILDTPVSPELLPKDKDG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEESF--------INNDQEYNDETVRYVE----HL 521 Q ++ + PY + D + + +F +Y++ET++ Sbjct: 535 KITQKTEDIVGPYELHDFFLYYFMRQNATFEKILYLAKEAFKNDYDEETIKKWLDKFMRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISEE 562 + ++KR P G K+ S D P + + + Sbjct: 595 FFTQQFKRSAIPDGPKVGTISLSPRGDLKMPSDASYNIWVENK 637 >gi|303239669|ref|ZP_07326194.1| NAD+ synthetase [Acetivibrio cellulolyticus CD2] gi|302592840|gb|EFL62563.1| NAD+ synthetase [Acetivibrio cellulolyticus CD2] Length = 640 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 125/632 (19%), Positives = 243/632 (38%), Gaps = 88/632 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ A V + N A+ ++A+++ + ++F EL I+ Y DL + + ++ Sbjct: 6 VRVGAAVPKLKVANCEYNAAQIVELIKKADKEYVKFLVFPELCITAYSCGDLFHQDALLK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S ++ + +T + ++G P + N V++ +G I+ K +PNYSEF+ Sbjct: 66 EASKQLENILENTKNTDLVAIIGIPLSLNNQLFNCAVVIQSGKILGAVPKTFIPNYSEFY 125 Query: 125 EKRTFISGYS---------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 E+R F +G I+F D+ GI ICED+W + Sbjct: 126 EERWFATGNKALSDTINICGHNVPFGVDILFENRENSDLCFGIEICEDLWVPIPPSSYQC 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 G+ +F+ +AS K + R E+V Q + +Y + + +++F G + Sbjct: 186 MYGSTLVFNTSASNELIGKYEYRRELVRQQSARCIAGYVYTSSNTNESTTDVVFGGHALI 245 Query: 223 FDGQQQLAFQMKHFS-EQNFMTEWH---------------------------YDQQLSQW 254 + L+ + EQ +E ++Q SQ Sbjct: 246 SEYGSILSESQRFVDDEQLIYSEIDIQKLINDRRKNTSFMEGVVEKKYRRILFEQSESQS 305 Query: 255 NYMSDDSASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + ++P + ++ +L ++ +IG+SGG+DS L Sbjct: 306 LALVRHVPPHPFVPSDTGNRDVRCKEIFSIQTSALAKRIKHTGLKHAVIGISGGLDSTLA 365 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + +N+ I +P T+ + +A KA+ + I+D F Sbjct: 366 LLVTAKTYELLGIPADNIIAITMPGFGTTNATYTNAMELMKAMNVNIREININDACLQHF 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + EN+Q+R R ILM L+N +++ T + SE+++G+ T GD Sbjct: 426 KDIGHDAN--IHDVTYENVQARERTQILMDLANKLGGLVIGTGDLSELALGWCTYNGDHM 483 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------H 476 ++ + KT V L W + + + I IL+ S EL P + Sbjct: 484 SMYSVNCSIPKTLVKFLVKWVAENMVDKNVKE----ILDRILDTPISPELLPPSAEGEIN 539 Query: 477 QTDQESLPPYPILDDIIKRIVENEESF--------INNDQEYNDE----TVRYVEHLLYG 524 Q ++ + PY + D + ++ S D +Y++E ++ + Sbjct: 540 QKTEDIVGPYELHDFFLYHMIRYGASPKKIVYLAEKAFDSKYSNEEIKHWLKIFIKRFFI 599 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNK 554 ++KR P G K+ S D P + Sbjct: 600 QQFKRSCLPDGPKVGTISLSPRGDWRMPSDAE 631 >gi|187934473|ref|YP_001885287.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum B str. Eklund 17B] gi|187722626|gb|ACD23847.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum B str. Eklund 17B] Length = 632 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 135/635 (21%), Positives = 236/635 (37%), Gaps = 88/635 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+A A VGDI NI+ + ++A I+F EL I+ Y DL + Sbjct: 1 MDFIKVASACPKTKVGDIDYNISNILKCIDDAKNNNSKFIVFPELCITSYTCGDLFLNDT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + I+ + + T D I +G P + N +L G I+ + K +PNYS Sbjct: 61 LLNKSITGINQILNATEDCDMLIALGAPLLINNVLYNCAYLLFKGKILGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISGYSNDP------------------IVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G S + + G+ ICED+W +L Sbjct: 121 EFYEKRWFTEGLSLETQEIDLPIQKNVPFGANLIFSSQIANFGVEICEDLWVTIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V+ Q + IY + + +L+F G Sbjct: 181 SLLGAHIIGNLSASNELVSKKDYRKSLVSNQSARCLCSYIYASAGVHESSTDLLFSGHLM 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMTE------------------------------WHYDQQL 251 + L + E + ++ Sbjct: 241 ISENGSILKENERFQRENEVIYSCVDIFRLKSERLKNLSFRDATKFTGKKPYIINFKFGC 300 Query: 252 SQWNYMSDDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + ++ ++P + + +N +L + K +IG+SGG+DS Sbjct: 301 TNISHFDRFIDKHPFVPSSKYEREERCKEIFNIQSAALAKRFEHTGSKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V K N+ TI +P T+ ++ +A K L C + I D Sbjct: 361 TLALLVVVKTFELLNLDKHNIVTITMPGFGTTDRTYNNALTLCKELNCDLREINIVDASL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + + EN+Q+R R ILM L+N + +L+ T + SE+++G+ T G Sbjct: 421 QHFKDIGH--DKNIHDVTYENVQARERTQILMDLANKEQGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + S IL+ S EL P Sbjct: 479 DHMSMYSVNPSIPKTLVRYLVRYVAEKESNS----EVSKTLIDILDTPVSPELLPKDANG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEES-----FINNDQEYND-------ETVRYVEHL 521 Q ++ + PY + D + ++N S F+ + +D + + Sbjct: 535 EITQKTEDIVGPYELHDFFLYHFIKNGSSKDRILFLAKEAFKDDYSYEEIEKWLNKFMWR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNK 554 + ++KR P G K+ + S D P + Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDAE 629 >gi|313905929|ref|ZP_07839285.1| NAD+ synthetase [Eubacterium cellulosolvens 6] gi|313469270|gb|EFR64616.1| NAD+ synthetase [Eubacterium cellulosolvens 6] Length = 638 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 130/626 (20%), Positives = 237/626 (37%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A V D+ N + R +EA + + + +F EL I+GY +DL + + Sbjct: 6 IKAAAITPEVRVADVRFNCEEICRYMDEAAERKIRVSVFPELCITGYTCQDLFLQDELVD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + T + VG P + N + G I+ + K LPNY+EF+ Sbjct: 66 KAREGLLYIAAHTKELDGLFFVGLPLAIDGKLYNVAAAISRGRILGIVPKTFLPNYNEFY 125 Query: 125 EKRTFISGYSND--------------PIVFRD-----IRLGILICEDIWKNSNICKHLKK 165 E R F +G D +VF +R+G ICED+W HL Sbjct: 126 EARHFFTGKELDTEIDLDGSSVPVSPKLVFCCREMPSLRIGAEICEDLWVPEPPSTHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R +V+GQ + + IY + + +L+F G + Sbjct: 186 SGATMIVNLSASNEVTGKKEYRRSLVSGQSARLVCAYIYASAGATESTQDLVFSGHNILV 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + ++E + + + M+ Sbjct: 246 EN-GSLLNESCLYTEGITSASFDLKRIEADRRRMTTYGTEPVHDSRKIPFSLPVAQTELN 304 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 ++P E + L+ + +IG+SGG+DS L + Sbjct: 305 RYIDPRPFVPSDPEKRAARCEEILMIQAMGLKKRLAHIGCASAVIGISGGLDSTLALLVT 364 Query: 313 VDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A ++ + + +P T+ ++ E+A K++G + + I V+ F+ + Sbjct: 365 VRAFDLLGFDRKGILAVTMPGFGTTDRTYENALQLIKSVGAEKKEISIAKAVHVHFADIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 Q E + EN Q+R R +LM L+N + +++ T + SE+++G+ T GD + Sbjct: 425 Q--DPEVHDVTYENSQARERTQLLMDLANKTGGIVIGTGDLSELALGWATYNGDHMSMYA 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + P + IL+ S EL P Q ++ Sbjct: 483 VNASVPKTLVRYLVQYFADSN----EDPALRKVLYDILDTPVSPELLPPEKGEISQKTED 538 Query: 482 SLPPYPILDDIIKRIVENEES--------FINNDQEYND----ETVRYVEHLLYGSEYKR 529 PY + D + ++ + S D Y+D + ++ + +KR Sbjct: 539 LAGPYELHDFFLYHVLRCQSSPSKIFRLAKKAFDGTYDDAFILKWLKSFYRRFFSQHFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 599 SCLPDGPKVGSVAVSPRGDLRMPSDA 624 >gi|226323895|ref|ZP_03799413.1| hypothetical protein COPCOM_01670 [Coprococcus comes ATCC 27758] gi|225207444|gb|EEG89798.1| hypothetical protein COPCOM_01670 [Coprococcus comes ATCC 27758] Length = 638 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 132/631 (20%), Positives = 243/631 (38%), Gaps = 86/631 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K+ +K+A ++ V D+ N + + +EA + G +I+F EL ++GY DL + Sbjct: 1 MKQGFIKVAAVTVDIRVADVWHNCKEICKRMKEAEKAGAKIIVFPELCLTGYTCSDLFTQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 ++ A+ + +T A + VG P + N L+ G I+ K LPN Sbjct: 61 DILLKEVRRALAKVAEETRHTEALVFVGLPLAIDGELYNVAAALNDGKILGFTTKTFLPN 120 Query: 120 YSEFHEKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNIC 160 Y EF+E R F G ++ D+ + ICED+W Sbjct: 121 YGEFYEMRQFRQGPKKARVISYEGEEILFGPQILYQAAEMDDLVVSAEICEDVWSPIPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 ++GA L + +AS K R E++ GQ + + +Y N G+ +++F G Sbjct: 181 IEAAREGAIILVNCSASDETIGKDSYREELIKGQSARLIAGYVYANAGDGESTTDVVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHY------------------------------- 247 + + L + K F+ + ++E Sbjct: 241 HNIIAENGTILK-EAKRFANEMIVSEIDIFRLLSERRKNTTFQTTEERYLPKVLFHISVE 299 Query: 248 DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + L++ + M + E + L+ + + ++G+SGG+DS L Sbjct: 300 ETALTRSFAQTPFVPQNMAERERRCEEILMIQAMGLKKRLVHTHSRTAVVGISGGLDSTL 359 Query: 308 CAAI---AVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + A D GK+ + + +P T+ ++ ++A +K LG +PI D V+ Sbjct: 360 ALLVTSKAFDMAGKDRKDIIAVTMPCFGTTDRTYQNACLMSKKLGATLKEVPIADAVHVH 419 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + EE + EN Q+R R +LM ++N M++ T + SE+++G+ T GD Sbjct: 420 FRDIGH--DEEVHDVTYENSQARERTQVLMDIANQEWGMVIGTGDMSELALGWATYNGDH 477 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------H 476 + + KT V L + L + +L+ S EL P Sbjct: 478 MSMYGVNASVPKTLVRHLVQYYADTCEDQELKE----VLLDVLDTPVSPELLPPKDGEIA 533 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + ++ + + Y+ ET+ + Sbjct: 534 QKTEDLVGPYELHDFYLYYVLRFGFEPSKIYRLAKFAFEGTYDSETIMKWLKTFYRRFFA 593 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G KI + D P Sbjct: 594 QQFKRSCLPDGPKIGTVALSPRGDWRMPSDA 624 >gi|188590467|ref|YP_001920417.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum E3 str. Alaska E43] gi|188500748|gb|ACD53884.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 632 Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 134/634 (21%), Positives = 232/634 (36%), Gaps = 88/634 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+A A VGDI NI+ + ++A I+F EL ++ Y DL + Sbjct: 1 MDFIKVASACPKTKVGDIDYNISNILKCIDDAKNNNSKFIVFPELCVTSYTCGDLFLNDT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + I+ + + T D I +G P + N +L G I+ + K +PNYS Sbjct: 61 LLNKSITGINQILNATEDCDMLITLGAPLLINSVLYNCAYLLFKGKILGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISGYSNDP------------------IVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G S + + G+ ICED+W +L Sbjct: 121 EFYEKRWFTEGLSLETEEIDLPIQKNVPFGTNLIFSSQIANFGVEICEDLWVTIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V+ Q + IY + + +L+F G Sbjct: 181 SLLGAHIIGNLSASNELVSKKDYRKSLVSNQSARCLCSYIYASAGVHESSTDLLFSGHLM 240 Query: 222 CFDGQQQLAFQMKHFSEQNFM------------------------------TEWHYDQQL 251 + L + E + ++ Sbjct: 241 ISENGSILKENERFQRENEVIYSCVDIFRLKSERLKNLSFRDASKFTGKKPHIINFKFGC 300 Query: 252 SQWNYMSDDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + ++ ++P + + +N +L + K +IG+SGG+DS Sbjct: 301 TNISHFDRFIDKHPFVPSSKCEREERCKEIFNIQSAALAKRFEHTGSKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V K N+ TI +P T+ ++ +A K L C + I D Sbjct: 361 TLALLVVVKTFELLNLDKHNIVTITMPGFGTTDRTYNNALTLCKELNCDLREINIVDASL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + + EN+Q+R R ILM L+N + +L+ T + SE+++G+ T G Sbjct: 421 QHFKDIGH--DKNIHDVTYENVQARERTQILMDLANKEQGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + IL+ S EL P Sbjct: 479 DHMSMYSVNPSIPKTLVRYLVRYVAEKESN----AEVSDTLIDILDTPVSPELLPKDANG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEES--------FINNDQEYNDE----TVRYVEHL 521 Q ++ + PY + D + ++N S +Y DE + Sbjct: 535 EISQKTEDIVGPYELHDFFLYHFIKNGSSKDRILFLAKEAFKDDYTDEEIEKWLNKFMWR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDA 628 >gi|310829646|ref|YP_003962003.1| hypothetical protein ELI_4098 [Eubacterium limosum KIST612] gi|308741380|gb|ADO39040.1| hypothetical protein ELI_4098 [Eubacterium limosum KIST612] Length = 665 Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 126/637 (19%), Positives = 249/637 (39%), Gaps = 91/637 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A A VGD A N EA + + ++ F EL ++GY DL F+++ + Sbjct: 23 IRTACAVPVIKVGDCAANADAVIALCAEAFEKQVGIVAFPELCVTGYTCGDLFFQRTLQK 82 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A ++A+D +++ + IVVG P G+ N V + G I+ + K +P+ E++ Sbjct: 83 AAAAAVDKIRAWSEGRAMLIVVGAPVAVGSGLYNCAVAISDGEILGIVPKTYVPDNQEYY 142 Query: 125 EKRTF---------------ISGYSNDPIVF-----RDIRLGILICEDIWKNSNICKHLK 164 EKR F ++F ++ +GI ICED+W + Sbjct: 143 EKRWFRSAGQLRVSETSFFGEPAPMGTGLLFSHESWEEVVVGIEICEDLWAPVPPSSYQA 202 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + + +AS K + R ++V Q + ++ +Y + G+ +L+F G + Sbjct: 203 AAGATIIVNPSASNEIIGKSEYRRDLVRQQSARLNAGYLYCSSGYGESTTDLVFGGDALI 262 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD-----------------------QQLSQWNYMSD 259 + + L + + F ++ + D + + + + Sbjct: 263 CE-KGTLLARSRRFQTESQLVVADMDVEAILHDRQLQTSFGDSVDILEGRVYEECFFTAC 321 Query: 260 DSASTMYIPLQE-------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 D+ + + E +N ++L V +++G+SGG+DS Sbjct: 322 DAQDCLRSVNPQPFVPADTARRNERCEEIFNIQTMALGSRVAHIGDPAMVVGISGGLDST 381 Query: 307 LCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + V+ ++ + + +P T+ ++ ++A + ++LG + + I + H Sbjct: 382 LALLVCVNVCDQFGIDRKRIHAVTMPGFGTTDRTYDNAVSLIRSLGATFHEISIREAATH 441 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + L + EN Q+R R ILM L+N +++ T + SE+++G+ T GD Sbjct: 442 HLEDIGHDLS--VHDVTYENAQARERTQILMDLANRLNGLVIGTGDLSELALGWATYNGD 499 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V L + + I +L+ S EL P Sbjct: 500 HMSMYGVNGGIPKTLVRYLVRYVADENPDEAI----RRILYDVLDTPVSPELLPPDASGK 555 Query: 476 -HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEH----LL 522 Q ++ + PY + D + ++ N S + Y+D T+ Sbjct: 556 IAQKTEDLVGPYELHDFFMYHVLRNGYSPDKIYYLSRQAFEGAYDDATLYKWLRNFYWRF 615 Query: 523 YGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRD 557 + ++KR P G K+ S D P + + Sbjct: 616 FTQQFKRSCLPDGPKVGTVSLSPRGDWRMPSDARVEE 652 >gi|261366932|ref|ZP_05979815.1| putative NH(3)-dependent NAD(+) synthetase [Subdoligranulum variabile DSM 15176] gi|282571048|gb|EFB76583.1| putative NH(3)-dependent NAD(+) synthetase [Subdoligranulum variabile DSM 15176] Length = 645 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 123/626 (19%), Positives = 230/626 (36%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A V D A N + A + + + L+ EL ++GY DL + ++ Sbjct: 13 IRAAAVSPALRVADCAYNAEQIIDAMQAFAAENVQLLCLPELSLTGYTCSDLFLQTPLLR 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + VVG P + + N ++ G ++ + K LPNYSEF+ Sbjct: 73 GAEKGLVNILQASKGLNLVTVVGVPVRHNSKLYNCAAVVCGGELLGLVPKTYLPNYSEFY 132 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R F++G + D LGI +CED+W Sbjct: 133 EQRHFVTGMREAECIEYAGQETLMGTQLLFSCKQMPDFVLGIEVCEDLWAPVPPSCSHAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R ++V GQ + +Y + G+ ++ F G + Sbjct: 193 AGATVIANLSASDETIGKAAYREQLVAGQSGRLLCAYLYADAGHGESTTDMTFAGHNLIA 252 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD-------- 275 + + Q FS + + E + + + + + E E Sbjct: 253 EN-GVILAQTAPFSGEEAIAELDLGRMVQERQHNTSFLPQNQGYTTVEFELMPTEICLSR 311 Query: 276 ----------------------YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 L ++ + ++G+SGG+DS L +AV Sbjct: 312 TVSPTPFVPQDATARAERCELILRIQAEGLAKRMEHTHARCAVLGISGGLDSCLALLVAV 371 Query: 314 DALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A + + + +P T+ ++ +A +ALG + + I D VN F+ + Q Sbjct: 372 RACKVLDRDPKEIVALTMPCFGTTRRTRSNAEILCEALGVSFAEINITDTVNQHFADIGQ 431 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + EN Q+R+R LM +N + ++ T + SE+++G+ T GD + Sbjct: 432 --DPSTYDVTFENCQARVRTLELMDYANKNGGFVIGTGDLSELALGWATYNGDHMSMYGV 489 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQE 481 + KT V + + T G L+ V+ IL+ S EL P Q ++ Sbjct: 490 NAGVPKTLVRHIVHYVAD---TCGEETLSRVLL-DILDTPVSPELLPTAEDGTIAQQTEK 545 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDE----TVRYVEHLLYGSEYKR 529 + PY + D + ++ + +Y E ++ + ++KR Sbjct: 546 LVGPYELHDFYLYYVLRFGFGPVKIYHLARTAFQDKYAPEILLHWLKNFYRRFFAQQFKR 605 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 606 SCLPDGPKVGSVTLSPRGDWRMPSDA 631 >gi|238917216|ref|YP_002930733.1| NAD+ synthase [Eubacterium eligens ATCC 27750] gi|238872576|gb|ACR72286.1| NAD+ synthase [Eubacterium eligens ATCC 27750] Length = 659 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 131/629 (20%), Positives = 240/629 (38%), Gaps = 87/629 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A V D NI + EA ++ + +F E+ I+GY DL + Sbjct: 19 IRAAAMTPKIKVADCEYNIENIKALMIEAYKKDTAIAVFPEMCITGYTCNDLFLHDRLLD 78 Query: 65 ACSSAIDTLKSDTHD-GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 + + ++K + + G VG P + + N V + G I+ + K+ LPNY EF Sbjct: 79 SALEGLVSIKHFSENVKGMISFVGLPYEMNGKLYNVVAGVMNGQILGMVPKMYLPNYGEF 138 Query: 124 HEKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLK 164 +E+R F G++ V R +++G+ ICED+W Sbjct: 139 YERRQFTPGFNECVYVNVDGEEVPFGSELLFTFDNNRKVKIGVEICEDLWTPQPPSIKHA 198 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + + +AS K R ++V+GQ + + +Y + GG+ +++F + Sbjct: 199 MNGATIIVNASASNETIGKDTYRKQLVSGQSARLVCGYVYSSAGGGESTQDIVFSAHNLI 258 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------ 258 + L + F++++ + ++ S+ M+ Sbjct: 259 CENGSTL-AEAHKFADESVYADIDVERICSERRRMTTYAVDENSAYTEVQAHGLINKELK 317 Query: 259 --------DDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 S E N L+ ++ N +IG+SGG+DS L Sbjct: 318 LIRYFDKAPFVPSDKKERDSRCEEILNIQSYGLKKRLEHTNCKNAVIGISGGLDSTLALL 377 Query: 311 IAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V A + + I +P T+ ++ +A K LGC + I V F Sbjct: 378 VTVRAFDMCGFDRSGIHCITMPCFGTTDRTYNNAVKLTKQLGCSLREINIMKAVRQHFED 437 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + E + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 438 IGH--DENNHNVTYENGQARERTQILMDIANQTNGMVIGTGDMSELALGWATYNGDHMSM 495 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQT 478 + + KT V L + + T G L+ V +L+ S EL P Q Sbjct: 496 YGVNASVPKTLVRHLVQF---YADTCGNEELSSV-LNDVLDTPVSPELLPPKEDGTIAQK 551 Query: 479 DQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVEH----LLYGSE 526 ++ + PY + D + ++ + EY+D+T+ + + Sbjct: 552 TEDLVGPYELHDFFMYHMLRFGAEPEKIFRIAKYAFAGEYDDKTIYKWLRTFTWRFFAQQ 611 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYPISN 553 +KR P G K+ + + D P Sbjct: 612 FKRSCLPDGPKVGSVAVSPRGDLRMPSDA 640 >gi|332828239|gb|EGK00951.1| hypothetical protein HMPREF9455_02740 [Dysgonomonas gadei ATCC BAA-286] Length = 646 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 137/635 (21%), Positives = 243/635 (38%), Gaps = 92/635 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + V D N + + EA +G+ +I+F EL I+ Y DL ++ ++ Sbjct: 7 VRVAAASPSLKVADCDYNTDEILKQIHEAQSKGVSVIVFPELGITAYTCGDLFLQRLLLE 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + T D ++VG P + + N V++ AG I K LPNY+EF+ Sbjct: 67 EAEKSLQRICDATRDLSVTVIVGVPVEISGRLYNMAVVVAAGYIHGAVPKTFLPNYNEFY 126 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S N I ICED+W G Sbjct: 127 EKRWFSSSEELKAQSASLCGQCVPVGINLIFRTPGFSFAIEICEDLWTPIPPSCAAALSG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+AS K R +V+ Q + +Y G+ ++IF G+S + Sbjct: 187 AEVIFNLSASNETTGKHAYRKALVSQQSARCIAGYVYAAAGAGESTTDIIFAGSSLIAEN 246 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS------------------------ 261 L + + FS + + D + + + + + S Sbjct: 247 GSVL-AEAERFSFDSQLIAADIDIERLRNDRLRNKSFSLSEYRVLDNIQFEEIDIDINKE 305 Query: 262 ----------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 +ST ++P Q+ + ++ V L + N +IG+SGG+DS Sbjct: 306 EKEFALNRYVSSTPFVPAQDATLDERCDEIFSMQVGGLAKRMLHVNGKTAVIGVSGGLDS 365 Query: 306 ALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V K E + I +P T+ ++ +A ++LG + I D V Sbjct: 366 TLALLVLVKTFDKLNLSREGIYGITMPGFGTTDRTYTNAIKLMRSLGVTIKEISIKDAVV 425 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + I EN Q+R R ILM +N +++ T + SE+++G+ T G Sbjct: 426 QHFKDIEHDAGT--HDITYENSQARERTQILMDYANKVNGLVIGTGDLSELALGWCTYNG 483 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D + + KT V L SW + + +++I +++ S EL P Sbjct: 484 DHMSMYAVNTGVPKTLVRTLVSWVAE----TQMDQESKIILEDVVDTPVSPELLPAAEDG 539 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEESFINN------------DQEYNDETVRYVEHL 521 Q ++ + PY + D + ++ S + E + +R Sbjct: 540 TIAQRTEDVVGPYILHDFFLYYVLRFGFSPAKIYYLAKHAFSGQYENEMILKWLRTFFWR 599 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNK 554 + ++KR P G K+ + + D P Sbjct: 600 FFSQQFKRSCLPDGPKVGSVNLSPRGDWRMPSDAA 634 >gi|288800158|ref|ZP_06405617.1| glutamine-dependent NAD+ synthetase [Prevotella sp. oral taxon 299 str. F0039] gi|288333406|gb|EFC71885.1| glutamine-dependent NAD+ synthetase [Prevotella sp. oral taxon 299 str. F0039] Length = 653 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 139/651 (21%), Positives = 241/651 (37%), Gaps = 102/651 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A V + NI + + E+A ++ +++I F EL I+GY +DL + + I Sbjct: 7 IKVASTTPTLEVANCKYNINEILKLAEQAEKEHVEIIAFPELSITGYTCQDLFRQTALIN 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ T +VG P + + +LN V+L G I+ V K LPNY EF+ Sbjct: 67 GAEQALCYYIDQTKQFDLISIVGLPLKVGDLLLNVAVVLQKGKILGVIPKTYLPNYGEFY 126 Query: 125 EKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S P + I ICED+W L Sbjct: 127 EKRWFASSQDLRPTEVVIADQKLLISAKPELFRTASGVLFAIEICEDVWAPIPPSNRLTL 186 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K +++ Q + IY G+ +L+F G + Sbjct: 187 SGADIIFNLSASDELIGKHNYLKSLLSQQSARTICGYIYSGSGFGESTQDLVFGGNILIY 246 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + +L K FS +N + D ++ + + + Sbjct: 247 EN-GRLIASGKRFSLENQLVTAQIDVEILRNERRDNTTYINAQRSSELGIEQIDVISCFA 305 Query: 262 ------------ASTMYIPLQEEEAD-----YNACVLSLRDYVQKNNFHKVIIGLSGGID 304 +IP E N L L ++ N V+IG+SGG+D Sbjct: 306 RDTNIFELERAIDPHPFIPTGEGRDQSLDDILNIQALGLVKRLKHINGKNVVIGISGGLD 365 Query: 305 SALCAAIAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S L + V A K N + + +P T+ ++ +A LG + I V Sbjct: 366 STLALLVCVLAFDKLNLDRKGIIGVTMPGFGTTDRTYNNALELMNKLGITSKEINISKSV 425 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + + EN Q+R R ILM LSN A+++ T + SE+++G+ T Sbjct: 426 LQHFEDIQHDIN--NHDATYENSQARERTQILMDLSNKLNAIVVGTGDLSELALGWATYN 483 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH--- 476 GD + + KT + L + + + + I++ S EL P Sbjct: 484 GDHMSMYGVNASVPKTLILHLVQYVATLPQMENIKD----VLLDIVQTPISPELIPANEL 539 Query: 477 ----QTDQESLPPYPILDDIIKRIVENEESFI--------------NNDQEYN----DET 514 Q ++ + PY + D + + + + N ++ Y+ Sbjct: 540 GEIKQKTEDLVGPYELHDFFLYHFLRHGFTPEKIYYLACNAFGENRNAEKSYSHSTIKAW 599 Query: 515 VRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPIS---NKFRDHIS 560 ++ + ++KR P G K+ + S D P N + + + Sbjct: 600 LKVFIRRFFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDASMNLWLERLE 650 >gi|260589318|ref|ZP_05855231.1| glutamine-dependent NAD+ synthetase [Blautia hansenii DSM 20583] gi|260540399|gb|EEX20968.1| glutamine-dependent NAD+ synthetase [Blautia hansenii DSM 20583] Length = 637 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 124/637 (19%), Positives = 240/637 (37%), Gaps = 87/637 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + +E + G +++F EL I+GY DL F ++ +Q Sbjct: 6 IKVAAATPQIEVADCIHNTQEIIKKAKEMSAAGARILVFPELCITGYTCHDLFFNETLLQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L + I VG P + + N+ ++ G I+ + K ++PNY EF+ Sbjct: 66 SAKQQLLVLAEELKGTEGLIFVGLPLEYSGKLYNTAAAINRGEILGIIPKHSIPNYGEFY 125 Query: 125 EKRTFISGYS--------------NDPIVFRD-----IRLGILICEDIWKNSNICKHLKK 165 E R F SG ++F + + ICED+W ++ Sbjct: 126 EARYFTSGRDIEGEIKLGDKMVSFGSKVLFECEEMPQLCVAAEICEDVWTPASPGLFHAM 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R +++ GQ + + +Y G+ +L+F G + Sbjct: 186 AGANVIVNLSASDEIAGKSEYRRDLIKGQSARLLCGYVYATAGNGESTQDLVFGGQNLIC 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + + F + + + +S Sbjct: 246 EN-GSLLAEAQLFKNETVYGVLDIQKLRGERRRISTWLEEKGEKHLHISFHLPMEETELY 304 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 ++ ++P + E + L+ ++ ++G+SGG+DS L + Sbjct: 305 NNFEKNPFVPDCDTERAKRCEEILTIQAMGLKKRMEHTKCKSAVLGISGGLDSTLALLVT 364 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A+ ++N+ + +P T+ ++ +A K LG + + I V F + Sbjct: 365 ARAMDFMGLDRKNITAVTMPCFGTTDRTYTNACELTKRLGAELLEVDIKKAVLQHFEDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + EN Q+R R ++M ++N M++ T + SE+++G+ T GD + Sbjct: 425 HDYN--VHDVTFENAQARERTQVIMDIANQQGGMVIGTGDFSELALGWATYNGDHMSMYG 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L L I +L+ S EL P Q ++ Sbjct: 483 VNGGVPKTMVRHLVRHYADTCQEEKLAE----ILRDVLDTPVSPELLPPKEGEIAQKTED 538 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDE----TVRYVEHLLYGSEYKR 529 + PY + D + ++ + + Y +E +R + ++KR Sbjct: 539 LVGPYELHDFFLYYMLRFHFSPSKIYRIAKKTFEGIYTEEEILKWMRKCYWRFFSQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISNK---FRDHISE 561 P G K+ + S D P + D I + Sbjct: 599 SCLPDGPKVGSVSVSPRGDLRMPSDANVRIWMDEIEK 635 >gi|251780691|ref|ZP_04823611.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085006|gb|EES50896.1| glutamine-dependent NAD(+) synthetase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 632 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 136/634 (21%), Positives = 233/634 (36%), Gaps = 88/634 (13%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+A A VGDI NI+ + ++A I+F EL I+ Y DL + Sbjct: 1 MDFIKVASACPKTKVGDIDYNISNILKCIDDAKNNNSKFIIFPELCITSYTCGDLFLNDT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + + I+ + + T D I +G P + N +L G I+ + K +PNYS Sbjct: 61 LLNKSITGINQILNATEDCDMLIALGAPLLINSVLYNCAYLLFKGKILGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISGYSNDP------------------IVFRDIRLGILICEDIWKNSNICKHL 163 EF+EKR F G S + + G+ ICED+W +L Sbjct: 121 EFYEKRWFTEGLSLETQEIDLPIQKNVPFGTNLIFSSQIANFGVEICEDLWVTIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +V+ Q + IY + + +L+F G Sbjct: 181 SLLGAHIIGNLSASNELVSKKDYRKNLVSNQSARCLCSYIYASAGVHESSTDLLFSGHLI 240 Query: 222 CFDGQQQLAFQMKHFSEQNFM------------------------------TEWHYDQQL 251 + L + E + ++ Sbjct: 241 ISENGSILKENERFQRENEVIYSCVDIFRLKSERLKNLSFRDASKFTGKKPHIINFKFGC 300 Query: 252 SQWNYMSDDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + + ++P + + +N +L + K +IG+SGG+DS Sbjct: 301 TNIIHFDRFIDKHPFVPSSKCEREERCKEIFNIQSAALAKRFEHTGSKKAVIGISGGLDS 360 Query: 306 ALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V K N+ TI +P T+ ++ +A K L C + I D Sbjct: 361 TLALLVVVKTFELLNLDKHNIVTITMPGFGTTDRTYNNALTLCKELNCDLREINIVDASL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + + + EN+Q+R R ILM L+N + +L+ T + SE+++G+ T G Sbjct: 421 QHFKDIGH--DKNIHDVTYENVQARERTQILMDLANKEQGLLIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D ++ + KT V L + S IL+ S EL P Sbjct: 479 DHMSMYSVNPSIPKTLVRYLVRYVAEKESNS----EVSKTLVDILDTPVSPELLPKDANG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVENEES--------FINNDQEYNDE----TVRYVEHL 521 Q ++ + PY + D + ++N S +Y+DE + Sbjct: 535 EITQKTEDIVGPYELHDFFLYHFIKNGSSKDRILFLAKEAFKDDYSDEEIEKWLNKFMWR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 595 FFTQQFKRSALPDGPKVGSISLSPRGDWRMPSDA 628 >gi|330997873|ref|ZP_08321707.1| NAD+ synthase [Paraprevotella xylaniphila YIT 11841] gi|329569477|gb|EGG51247.1| NAD+ synthase [Paraprevotella xylaniphila YIT 11841] Length = 643 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 127/638 (19%), Positives = 230/638 (36%), Gaps = 90/638 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++IA A VGD N + +A +G+++I F EL I+ Y DL ++ + Sbjct: 6 VRIATAIPGVKVGDCKYNAQQIESLIIQAEGKGVEIICFPELSITAYTCGDLFAQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + ++ T ++G P +LN ++ G I+ + K LPNY EF+ Sbjct: 66 EAEMCLISILDFTRSLDIISIIGLPVAYHGTLLNCAAVIQKGKILGLIPKTYLPNYKEFY 125 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F SG + G+ ICED+W L QG Sbjct: 126 EQRWFTSGDVHGNSNVLVCGQMVPLSRHLVFNTPSCCFGVEICEDVWAPIPPSSELVLQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+A K ++ Q + ++ G+ +++F G + ++ Sbjct: 186 AEIIFNLSADNEGVGKQDYLKSLLAQQSARCLAGYVFSGAGFGESTQDVVFAGKALIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 LA + F EQ +E + ++ + SAS + + Sbjct: 246 GMLLAENERFSFKEQLVYSEIDVECLRAERRVNTTFSASIARLRPHDTMRIDTELFASKD 305 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E + + L + V+IG+SGG+DS L Sbjct: 306 IELSRKVDPIPFVPAGKALNERCEEIFAIQIAGLAKRLVHTQTQTVVIGISGGLDSTLAL 365 Query: 310 AIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + K + + + +P T+ ++ +A K+LG + I F Sbjct: 366 LVCTKTFDKLGLSRKGIVGVTMPGFGTTNRTYTNAVNLMKSLGVTLREISIKKSCIQHFE 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + EN Q+R R ILM ++N M++ T + SE+++G+ T GD Sbjct: 426 DLG--FDMANHNVTYENAQARERTQILMDVANQMNGMVVGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + ++ I++ S EL P Q Sbjct: 484 MYGVNASIPKTLVKHLVKWVADSI----IDEPSQATLLDIVDTPISPELIPADENGNISQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEH----LLYGS 525 ++ + PY + D + + + +Y DE ++ + Sbjct: 540 KTEDLVGPYALHDFFLYYTLRFGFRPSKIFYLAQYAFAGKYTDEVIKKWLTTFFRRFFSQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYP---ISNKFRDH 558 ++KR P G K+ + S D P + + D Sbjct: 600 QFKRSCLPDGPKVGSCSLSPRGDWRMPSDASAAAWMDE 637 >gi|291514607|emb|CBK63817.1| NAD+ synthetase [Alistipes shahii WAL 8301] Length = 526 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 172/554 (31%), Positives = 290/554 (52%), Gaps = 29/554 (5%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIAIAQLN +GD+ GN +K + +A Q DL++F E +SG P DL+ K +F++ Sbjct: 1 MKIAIAQLNYTIGDVDGNASKIIDSIHKAKAQHADLVIFAEQAVSGTPAFDLLRKTTFLE 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A+ + S G +VG P +G +++ ++ ++ K + + Sbjct: 61 LCEDALVEIASCC--DGIAAIVGLPILTADGTISAAALIQDRKVLRYIGKKYI---TARR 115 Query: 125 EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKL 184 E + + + + I++ +D+ + + Q E + S+NA Y + Sbjct: 116 EMGFLVPSKGYEYATIKGHKCAIIVGDDLSRERDF-----DQSVETVISINARKYGKGTM 170 Query: 185 KKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTE 244 R+E++ ++ VNQVGG ++++DG S + + +L MK+F E + + Sbjct: 171 TYRYEMMRNLAFVESKNLVLVNQVGGSTDIVYDGTSGALNSRGELVLMMKNFEEDFQIFD 230 Query: 245 WHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 + +D + Y A LRD+ +KN + K IGLSGGID Sbjct: 231 TKASARPITIPSTYNDRTRLV----------YEAARCGLRDFFRKNGYRKASIGLSGGID 280 Query: 305 SALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 SA+ A+IA DALG ENV+ +++P ++S +S+EDA A+ LG +Y+V+PI ++ + Sbjct: 281 SAVVASIAADALGAENVRALLMPSPFSSLESVEDAKELARNLGIEYNVIPISEIYTSVVN 340 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + ENIQ+RIR +LMAL N + +LL +SNKSE ++G TLYGD +G Sbjct: 341 TLKPVIGGTEFDATEENIQTRIRTVLLMALQNKTDYILLNSSNKSENALGLCTLYGDTAG 400 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP 484 F+P DLYK++++ +A + N IP SIL K PS+EL P Q D + LP Sbjct: 401 AFSPTGDLYKSEMYDVARYINRTQ--------GNPIPESILTKEPSSELHPGQKDSDILP 452 Query: 485 PYPILDDIIKRIVENEESFINN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSF 543 PY ++D I+ R++E + + ++ E V + ++ +E KR Q P ++++ +F Sbjct: 453 PYEVVDAILFRMIEEGQHREEIVNAGFDSEVVEKIHGMIMRNEKKRYQFPPVLRLSSCTF 512 Query: 544 GRDRLYPISNKFRD 557 G +RL P++NK+ D Sbjct: 513 GHERLMPLTNKYGD 526 >gi|253580238|ref|ZP_04857504.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848331|gb|EES76295.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 638 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 132/631 (20%), Positives = 244/631 (38%), Gaps = 86/631 (13%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K +K A A V D N ++ R E ++ + ++ F EL I+GY +DL + Sbjct: 1 MKNGYIKTAAATPYITVADCNANGSEIIRLIHEMEKEHVKVMTFPELCITGYTCQDLFLQ 60 Query: 60 KSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPN 119 + + + + + +T D A + VG P ++ + N +L+ G II + K LPN Sbjct: 61 RRLLDSAWETLLKITKETADVDALVFVGVPFRNHGKLYNVAAVLNRGEIIGLVPKTYLPN 120 Query: 120 YSEFHEKRTFISGYSN-DPIVFRDIRL------------------GILICEDIWKNSNIC 160 Y EF+E+R F SG + + R+ ICED+W Sbjct: 121 YGEFYEQRHFASGLGCLEYVDIEGKRVPFGTDILFICEEEPELVAAAEICEDLWVTLPPS 180 Query: 161 KHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDG 218 + GA + +L+AS K R ++V+GQ + + +Y N G+ +L+F G Sbjct: 181 VLHAQAGANLIVNLSASNEMVGKDSYRRDLVSGQSARLVCGYVYANAGEGESTQDLVFGG 240 Query: 219 ASFCFDGQQQLAFQMKHFSEQNFMTEWHY----DQQLSQWNYMSDDSASTMYIPLQ---- 270 + + + + K F +E D++ Y D + + + Sbjct: 241 QNMIAEN-GVILAEGKRFHNGIVCSEIDVQRLNDERRRLTTYQPADDSDHIKVCFHLNVE 299 Query: 271 -----------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 + N + L+ + + HK +GLSGG+DS L Sbjct: 300 ETKLTRKYSQYPFVPSRKEERDMRCDEILNIQAMGLKKRMDHIHCHKATVGLSGGLDSTL 359 Query: 308 CAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + A ++++ I +P T+ ++ ++A ++ LG + I + VN Sbjct: 360 ALLVIARAFDLSDADRKDIHCITMPCFGTTDRTYQNACKLSQCLGATLSEINIKEAVNVH 419 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F ++ + EN Q+R R ILM +N ++L+ T + SE+++G+ T GD Sbjct: 420 FRDIAH--DPSVHDVTYENSQARERTQILMDSANQDGSILVGTGDLSELALGWATYNGDH 477 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------H 476 + + KT V L + + + IL+ S EL P Sbjct: 478 MSMYGVNASVPKTLVRHLVRYYA----DTCKDEKLTEVLLDILDTPVSPELLPPKDGKIA 533 Query: 477 QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYV----EHLLYG 524 Q ++ + PY + D + ++ + + Y+ ET+ + Sbjct: 534 QKTEDLVGPYELHDFYLYYMLRAGFEPEKIYRLACETFEGMYDKETIFKWLKTFYWRFFA 593 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + + D P Sbjct: 594 QQFKRSCLPDGPKVGSVAVSPRGDLRMPSDA 624 >gi|325268980|ref|ZP_08135601.1| NAD synthetase [Prevotella multiformis DSM 16608] gi|324988601|gb|EGC20563.1| NAD synthetase [Prevotella multiformis DSM 16608] Length = 656 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 137/652 (21%), Positives = 242/652 (37%), Gaps = 101/652 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+A+ + A +G+++I+F EL ++GY +DL ++ + Sbjct: 6 IKVAAAIPAVKVADTKFNLAETEKQIAIAEGKGVEVIVFPELSLTGYSCQDLFHQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ +L T +VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 NAEQAVLSLLDFTRQLDITAIVGAPVAVGPLLLNCALVIQQGRLLGIVAKTFLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S P + + I ICED+W + HL Sbjct: 126 EKRWFASSQDLRPQRIHFAGHRILVTPDMQIFRTAQGAKFAIEICEDVWAPTPPSNHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+AS K ++ Q + +Y + G+ ++++ G + F Sbjct: 186 AGAEIIFNLSASDELIGKHAYLKSLLAQQSARTISGYVYSSCGFGESTQDVVYGGNALIF 245 Query: 224 DGQQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMS------------------------ 258 + L + Q ++E ++ S+ S Sbjct: 246 ENGSLLEQSDRFRLDAQLIISEIDVERLRSERRTNSTFVNAQRPVAAGLAGITGQAGELG 305 Query: 259 ------------------DDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKV 295 +IP E E +N V L + N V Sbjct: 306 MRVDCLPPANPMREFTLTRRFTPHPFIPGTENMKDVCEEIFNIQVSGLAKRLVHTNCRTV 365 Query: 296 IIGLSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKY 350 IIG+SGG+DS L +AV K + + + +P T+ ++ +A + LG Sbjct: 366 IIGISGGLDSTLALLVAVRTFDKLGLDRKGIVGVTMPGFGTTDRTYRNAMTLMENLGITI 425 Query: 351 DVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I V F + + EN Q+R R ILM LSN +++ T + SE Sbjct: 426 REVNIAASVLQHFKDIGHDAA--VHDVTYENAQARERTQILMDLSNQLGGLVIGTGDLSE 483 Query: 411 ISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 +++G+ T GD + + KT L + + + + I++ S Sbjct: 484 LALGWCTYNGDHMSMYAVNVSVPKTLTQYLVRYVAENSV----DETSRRTLNDIVDTPIS 539 Query: 471 AELRP-------HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV 515 EL P Q ++ + PY + D + ++ + Y D + Sbjct: 540 PELTPADDKGDIAQKTEDLVGPYELHDFFLYYVLRCGFRPSKIYWLAQNTFQGVYADGVI 599 Query: 516 RYVEHL----LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 + + + ++KR P G K+ + S D P D ++E Sbjct: 600 LHWLRIFFRRFFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDAMSTDWLNE 651 >gi|34540346|ref|NP_904825.1| NAD synthetase [Porphyromonas gingivalis W83] gi|34396658|gb|AAQ65724.1| glutamine-dependent NAD+ synthetase [Porphyromonas gingivalis W83] Length = 647 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 139/628 (22%), Positives = 241/628 (38%), Gaps = 88/628 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + R EA+ +G++++ F EL I+GY DL F+ + Sbjct: 6 MKVAAAVPFVKVADCEYNIERIDRMVHEADAKGVEIMTFPELSITGYSCGDLFFQPFLQE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ L T + ++VG P + +E + NS V+ G I+ K LPNY EF Sbjct: 66 RANEALCRLVEQTANTTVMVIVGMPLRVEEKLFNSAVVFQQGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTFIS-----------GYSNDPI----VFRDIRLGI--LICEDIWKNSNICKHLKKQG 167 E R F G + PI +F+ +G+ ICED+W L G Sbjct: 126 EARWFSPAHTLQYSTISIGQHSVPIGRNLIFKCGTVGVGIEICEDMWTPFTPGTRLCLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L++S K +++G S +Y + G+ +++F G +F + Sbjct: 186 AEVIFNLSSSNENAGKHSYLRSLISGLSSQGICAYVYASSGYGESSTDIVFTGKAFIAEA 245 Query: 226 QQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEA---------- 274 + + + + E+ +++ + ++ S A+ + E+ Sbjct: 246 GEIVEEMERFRYEERMIISDIDVSRIQTERLINSSFKAAVTFHTHDEKFNQLPFKLRSRQ 305 Query: 275 ---------------------------DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 N V L + +IG+SGG+DSAL Sbjct: 306 ESLPMTRRVDRNPFMPEDKDRKERSREMINIQVCGLMQRLLHMGAEHAVIGISGGLDSAL 365 Query: 308 CAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + A ++N+ + +P TS ++ +A A +A+G + I + Sbjct: 366 ALIVCAQAFDRLDLPRKNIIAVTMPGFGTSDRTYRNAFALMEAIGVTIKEIDIKEACLRH 425 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + E EN Q+R R ILM L+N A ++ T + SE+++G+ T GD Sbjct: 426 FEAIGH--NPEVQDTTFENTQARERTQILMNLANIYNAPVIGTGDLSELALGWVTYNGDH 483 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------- 475 + + KT V L G L + I+ S EL+P Sbjct: 484 MSMYAVNAGIAKTTVQILVDHIAHSG---WLDEAASAVLLDIVRTPISPELKPVGQDGNI 540 Query: 476 HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLY 523 Q ++ + PY + D I + NE + + Y ++ + Sbjct: 541 SQKTEDLVGPYELHDFFIYHFLHNEYKPSKIYYLAGVAFKGIYTKAEIKKWMMVFFRRFF 600 Query: 524 GSEYKRRQAPVGTKITAKSFGRD--RLY 549 +YKR P G K++ S Sbjct: 601 AQQYKRNCMPDGPKVSCISLSPRGAWRM 628 >gi|139437275|ref|ZP_01771435.1| Hypothetical protein COLAER_00414 [Collinsella aerofaciens ATCC 25986] gi|133776922|gb|EBA40742.1| Hypothetical protein COLAER_00414 [Collinsella aerofaciens ATCC 25986] Length = 668 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 135/640 (21%), Positives = 246/640 (38%), Gaps = 99/640 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A A V D+ GN A A EA +G+ ++ EL ++GY DL ++ + Sbjct: 21 LRVAAASPRIRVADVEGNAEVALAAVREATERGVRALVLPELNLTGYTAADLFHNRTLLH 80 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AC +A+ + +T D +G P E + N + AG ++ + K LPNY EF+ Sbjct: 81 ACEAALVHILDETRDLPIVFTIGLPVAVAENIYNCAAVCCAGELLGLTAKKYLPNYGEFY 140 Query: 125 EKRTFIS-----------GYSNDPI----VFR-------DIRLGILICEDIWKNSNICKH 162 E+R F G P+ V+R D+ LG+ +CED+W + Sbjct: 141 ERRWFAPSPADPVWVEFAGQGPVPLGSGLVYRCCDEGAEDMVLGVEVCEDLWVPAPPSTE 200 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 + GA + + +AS K R +++ Q + ++ Y + G+ +++F G + Sbjct: 201 MALAGATVILNPSASDEIIGKADYRRSLISNQSARLYCAYAYADASEGESTTDMVFAGEN 260 Query: 221 FCFDGQQQL-----------------------------AFQMKHFSEQNFMTEWHYDQQL 251 ++ +L + E E+ ++ L Sbjct: 261 LIYENGSKLAATKLLTCDMAIADVDLDRLVAERRRSTTWARTDDAPEAT-TVEFSFEGVL 319 Query: 252 SQWNYMSDDSASTMYIPLQE------------EEADYNACVLSLRDYVQKNNFHKVIIGL 299 ++ + D P E + L+ + +IGL Sbjct: 320 AEEPVLRDACDIDRVFPRAPFVPADHGDLAERCETILDLQTAGLKTRLAHTGTKAAVIGL 379 Query: 300 SGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS L + V A + + + +P T+ ++ +A + A+ LG + + Sbjct: 380 SGGLDSTLALLVTVRAFDALGLPRTGITAVSMPGFGTTHRTKSNAESLARDLGVSFREVS 439 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 IH V F + + EN Q+R R ILM L+N + ++ T + SE+++G Sbjct: 440 IHAAVEQHFKDIEH--DPAVQDVTYENSQARERTQILMDLANQAGGFVIGTGDLSELALG 497 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 + T GD + + KT V L + G + EV+ IL+ S EL Sbjct: 498 WATYNGDHMSMYAVNASVPKTLVRHLVRYAADVFG----GRIAEVLL-DILDTPVSPELL 552 Query: 475 P-------HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETV---- 515 P Q ++ + PY + D + ++ + + + Y+ +TV Sbjct: 553 PPTGDGEIAQRTEDLVGPYELHDYFLYYLLRFGFEPGKIYHMALKSFEGVYDVKTVHTWL 612 Query: 516 RYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 R + ++KR P G K+ + + D P Sbjct: 613 RTFYRRFFAQQFKRSCLPDGPKVGSVTLSPRGDWRMPSDA 652 >gi|188995305|ref|YP_001929557.1| NAD synthetase [Porphyromonas gingivalis ATCC 33277] gi|188594985|dbj|BAG33960.1| glutamine-dependent NAD synthetase [Porphyromonas gingivalis ATCC 33277] Length = 647 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 139/628 (22%), Positives = 241/628 (38%), Gaps = 88/628 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + R EA+ +G++++ F EL I+GY DL F+ + Sbjct: 6 MKVAAAVPFVKVADCEYNIERIDRMVHEADTKGVEIMTFPELSITGYSCGDLFFQPFLQE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + A+ L T + ++VG P + +E + NS V+ G I+ K LPNY EF Sbjct: 66 RANEALCRLVEQTANTTVMVIVGMPLRVEEKLFNSAVVFQQGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTFIS-----------GYSNDPI----VFRDIRLGI--LICEDIWKNSNICKHLKKQG 167 E R F G + PI +F+ +G+ ICED+W L G Sbjct: 126 EARWFSPAHTLQYSTISIGQHSVPIGRNLIFKCGTVGVGIEICEDMWTPFTPGTRLCLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L++S K +++G S +Y + G+ +++F G +F + Sbjct: 186 AEVIFNLSSSNENAGKHSYLRSLISGLSSQGICAYVYASSGYGESSTDIVFTGKAFIAEA 245 Query: 226 QQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEA---------- 274 + + + + E+ +++ + ++ S A+ + E+ Sbjct: 246 GEIVEEMERFRYEERMIISDIDVSRIQTERLINSSFKAAVTFHTHDEKFNQLPFKLRSRQ 305 Query: 275 ---------------------------DYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 N V L + +IG+SGG+DSAL Sbjct: 306 ESLPMTRRVDRNPFMPEDKDRKERSREMINIQVCGLMQRLLHMGAEHAVIGISGGLDSAL 365 Query: 308 CAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + A ++N+ + +P TS ++ +A A +A+G + I + Sbjct: 366 ALIVCAQAFDRLDLPRKNIIAVTMPGFGTSDRTYRNAFALMEAIGVTIKEIDIKEACLRH 425 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 F + E EN Q+R R ILM L+N A ++ T + SE+++G+ T GD Sbjct: 426 FEAIGH--NPEVQDTTFENTQARERTQILMNLANIYNAPVIGTGDLSELALGWVTYNGDH 483 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------- 475 + + KT V L G L + I+ S EL+P Sbjct: 484 MSMYAVNAGIAKTTVQILVDHIAHRG---WLDEAASAVLLDIVRTPISPELKPVGQDGNI 540 Query: 476 HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLY 523 Q ++ + PY + D I + NE + + Y ++ + Sbjct: 541 SQKTEDLVGPYELHDFFIYHFLHNEYKPSKIYYLAGVAFKGIYTKAEIKKWMMVFFRRFF 600 Query: 524 GSEYKRRQAPVGTKITAKSFGRD--RLY 549 +YKR P G K++ S Sbjct: 601 AQQYKRNCMPDGPKVSCISLSPRGAWRM 628 >gi|282877516|ref|ZP_06286334.1| NAD+ synthetase [Prevotella buccalis ATCC 35310] gi|281300340|gb|EFA92691.1| NAD+ synthetase [Prevotella buccalis ATCC 35310] Length = 685 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 136/681 (19%), Positives = 247/681 (36%), Gaps = 129/681 (18%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+ + +A QG+++I+F EL I+ Y +DL + + Sbjct: 6 IKVACAVPLVKVADCKYNVEQTEAQIAQAEEQGVEIIVFPELGITSYTCQDLFQQNLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +++ L T ++VG P + +LN +++ G II V K LP+YSEF+ Sbjct: 66 ASEASVLHLLEFTRKLDVIVIVGLPIIVGDLLLNCGMVIQQGQIIGVIPKTYLPDYSEFY 125 Query: 125 EKRTFISGY----------------SNDPIVF---RDIRLGILICEDIWKNSNICKHLKK 165 EKR F S + DP +F ++ G+ ICED+W L Sbjct: 126 EKRWFASSQDLKETTIRYAGQQIVVTPDPQIFVTADGVQFGVEICEDVWAPVPPSNTLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA+ +F+L+AS K +++ Q S +Y G+ +L++ G + Sbjct: 186 AGADIIFNLSASDAVVGKYNYLKSLLSQQSSRTITGYVYATSGFGESTQDLVYAGNGLIY 245 Query: 224 D-----------------------------------------------------GQQQLA 230 + + Sbjct: 246 EKGTLLAEGKRFTFEGQIQTAQIDIEMLRAERRTNSTYVNAQRQVNNYAKQKGFADNLIP 305 Query: 231 FQMKHFSEQNFMTEWHYDQQLSQWNYM-SDDSASTMYIPLQEEEADYNACVL-----SLR 284 Q FS + + L +++ + ++P E+ + VL L Sbjct: 306 NQFAIFSSGSTIHYLQCLSCLRSYDFKLEREINPHPFLPDTEQLDESCEEVLNIQSMGLA 365 Query: 285 DYVQKNNFHKVIIGLSGGIDSALCAAIAVD-----ALGKENVQTIMLPYKYTSPQSLEDA 339 ++ ++G+SGG+DS L + V ++ + + +P T+ ++ +A Sbjct: 366 TRIKHIGCRNAVLGISGGLDSTLALLVCVLTFDQLGYDRKGIIGVTMPGFGTTDRTYHNA 425 Query: 340 AACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSK 399 + LG + I VN F + EN Q+R R ILM LSN Sbjct: 426 IDLMQELGITIKEIDIRKSVNQHFEDIGH--DPNVHDATYENCQARERTQILMDLSNQLN 483 Query: 400 AMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV 459 A+++ T + SE+++G+ T GD + + KT + L + H Sbjct: 484 ALVVGTGDLSELALGWATYNGDHMSMYGVNAGVPKTMIRFLVRFYAQHLTCDDRAAR--- 540 Query: 460 IPPSILEKSPSAELRPH-------QTDQESLPPYPILDDIIKRIVE-----------NEE 501 I +++ S EL P Q ++ + PY + D + + ++ Sbjct: 541 ILMDVIDTPISPELTPADEHGDIKQKTEDLVGPYELHDFFLYYFLRFGFRPRKIFLLAKK 600 Query: 502 SFINNDQE---------------YNDETVRYVE----HLLYGSEYKRRQAPVGTKITAKS 542 +F + Y++ET++ + ++KR P G K+ + S Sbjct: 601 AFAETKPQQRQDLEGDSLKMIGYYDEETIKKWLKVFCKRFFSQQFKRSCLPDGPKVVSVS 660 Query: 543 FGR--DRLYPISNKFRDHISE 561 D P R + E Sbjct: 661 LSPRGDWRMPSDATSRLWLEE 681 >gi|189466424|ref|ZP_03015209.1| hypothetical protein BACINT_02799 [Bacteroides intestinalis DSM 17393] gi|189434688|gb|EDV03673.1| hypothetical protein BACINT_02799 [Bacteroides intestinalis DSM 17393] Length = 641 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 126/630 (20%), Positives = 236/630 (37%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + A +G+ +I F EL ++GY DL ++ ++ Sbjct: 6 VKVAAAVPRVKVADCKFNAGEIEKEIIIAEGKGVQIIAFPELCVTGYTCGDLFAQQLLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + S+T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 66 EAEMGLIHIISNTRQLDIIAILGMPIAMNGVLLNAAVVIQKGKVLGVVPKTYLPNYKEFY 125 Query: 125 EKRTFISGYSNDPIVFR-----------------DIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S R D GI ICED+W L QG Sbjct: 126 EKRWFTSAVDVSETSVRLCGQLVPMGANLLFEMADTTFGIEICEDLWAPIPPSSSLALQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G ++ Sbjct: 186 AEILFNLSADNEGIGKHNYLRSLISQQSARCIAGYVFCSCGFGESTTDVVFAGNGLIYEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 + + + F Q + E + + + +A + +E Sbjct: 246 GSLIEYSKRFSFEGQVVIGEIDVEHLRIERRVNTTFAACRAHCAPEEAVRVSTEYVNSKE 305 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E ++ V L + ++G+SGG+DS L Sbjct: 306 LNLTRRFDPHPFVPQGTALNERCEEIFSIQVSGLAQRLVHTRAKSAVVGISGGLDSTLAL 365 Query: 310 AIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V ++++ + +P T+ ++ +A +LG + I + F Sbjct: 366 LVCVKTFDKLGWSRKDIIGVTMPGFGTTDRTHTNAVDLMNSLGITVREVSIKEACIQHFK 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + +V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 426 DIDHDIN--VHDVVYENAQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + + + I++ S EL P Q Sbjct: 484 MYGVNGSVPKTLVKHLVKWVAEN----DMDAASRATLLDIVDTPISPELIPADENGNIKQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEHL----LYGS 525 ++ + PY + D + + + Y++ET++ + + Sbjct: 540 ITEDLVGPYELHDFFLYYFLRCGFRPSKIFFLAARTFKDMYDEETIKKWLQVFFRRFFNQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 600 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 629 >gi|150006982|ref|YP_001301725.1| NAD synthetase [Parabacteroides distasonis ATCC 8503] gi|149935406|gb|ABR42103.1| putative glutamine-dependent NAD+ synthetase [Parabacteroides distasonis ATCC 8503] Length = 640 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 129/639 (20%), Positives = 244/639 (38%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPHVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ-------------- 270 L + EQ ++E + + + + Sbjct: 246 GTLLRESERFSMEEQLVISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPSRAL 305 Query: 271 --------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 E ++ V L V + ++G+SGG+DS L Sbjct: 306 DLTRVIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLALL 365 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V ++ + I +P T+ ++ +A ++LG + I + F Sbjct: 366 VTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACVQHFKD 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 426 IDHDI--HVHDVTYENSQARERTQLLMDVANQANGLVIGTGDLSELALGWATYNGDHMSM 483 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QT 478 + + KT V L W ++ + + I++ S EL P Q Sbjct: 484 YGVNGSIPKTLVKYLVEWVANNKV----DEASRTTLLDIVDTPISPELIPADEHGNIKQK 539 Query: 479 DQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVEH----LLYGSE 526 ++ + PY + D + + S + Y+D T++ H + + Sbjct: 540 TEDLVGPYELHDFFLYHFLRFGASPAKIYFLAKRAFGETYDDATLKKWLHTFFRRFFQQQ 599 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYP---ISNKFRDHIS 560 +KR P G K+ + S D P ++ + D I+ Sbjct: 600 FKRSCLPDGPKVGSISLSPRGDWRMPSDAMATLWLDEIA 638 >gi|298377406|ref|ZP_06987359.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_19] gi|298265820|gb|EFI07480.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 3_1_19] Length = 640 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 129/639 (20%), Positives = 244/639 (38%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPHVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ-------------- 270 L + EQ ++E + + + + Sbjct: 246 GTLLRESERFSMEEQLVISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNRAL 305 Query: 271 --------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 E ++ V L V + ++G+SGG+DS L Sbjct: 306 DLTRVIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLALL 365 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V ++ + I +P T+ ++ +A ++LG + I + F Sbjct: 366 VTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACVQHFKD 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 426 IDHDI--HVHDVTYENSQARERTQLLMDVANQANGLVIGTGDLSELALGWATYNGDHMSM 483 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QT 478 + + KT V L W ++ + + I++ S EL P Q Sbjct: 484 YGVNGSIPKTLVKYLVEWVANNKV----DEASRTTLLDIVDTPISPELIPADEHGNIKQK 539 Query: 479 DQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVEH----LLYGSE 526 ++ + PY + D + + S + Y+D T++ H + + Sbjct: 540 TEDLVGPYELHDFFLYHFLRFGASPAKIYFLAKRAFGETYDDATLKKWLHTFFRRFFQQQ 599 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYP---ISNKFRDHIS 560 +KR P G K+ + S D P ++ + D I+ Sbjct: 600 FKRSCLPDGPKVGSISLSPRGDWRMPSDAMATLWLDEIA 638 >gi|262384264|ref|ZP_06077399.1| NAD synthetase [Bacteroides sp. 2_1_33B] gi|262293967|gb|EEY81900.1| NAD synthetase [Bacteroides sp. 2_1_33B] Length = 640 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 130/639 (20%), Positives = 243/639 (38%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPQVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ-------------- 270 L + EQ ++E + + + + Sbjct: 246 GTLLRESERFSMEEQLVISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNRTL 305 Query: 271 --------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 E ++ V L V + ++G+SGG+DS L Sbjct: 306 DLTRAIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLALL 365 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V ++ + I +P T+ ++ +A ++LG + I D F Sbjct: 366 VTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKDACIQHFKD 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 ++ + + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 426 INHDI--HVHDVTYENSQARERTQLLMDVANQENGLVIGTGDLSELALGWATYNGDHMSM 483 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QT 478 + + KT V L W ++ + + I++ S EL P Q Sbjct: 484 YGVNGSIPKTLVKYLVEWVANNKV----DEASRATLLDIVDTPISPELIPADEHGNIKQK 539 Query: 479 DQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVEH----LLYGSE 526 ++ + PY + D + + S + Y+D T++ H + + Sbjct: 540 TEDLVGPYELHDFFLYHFLRFGASPAKIYFLAKRAFGETYDDSTLKKWLHTFFRRFFQQQ 599 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYP---ISNKFRDHIS 560 +KR P G K+ + S D P ++ + D I+ Sbjct: 600 FKRSCLPDGPKVGSISLSPRGDWRMPSDAMATLWLDEIA 638 >gi|256842008|ref|ZP_05547513.1| NAD synthetase [Parabacteroides sp. D13] gi|256736324|gb|EEU49653.1| NAD synthetase [Parabacteroides sp. D13] Length = 640 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 129/639 (20%), Positives = 242/639 (37%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPQVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ-------------- 270 L + EQ ++E + + + + Sbjct: 246 GTLLRESERFSMEEQLVISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNRTL 305 Query: 271 --------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 E ++ V L V + ++G+SGG+DS L Sbjct: 306 DLTRAIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLALL 365 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V ++ + I +P T+ ++ +A ++LG + I + F Sbjct: 366 VTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACIQHFKD 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 426 IDHDI--HVHDVTYENSQARERTQLLMDVANQENGLVIGTGDLSELALGWATYNGDHMSM 483 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QT 478 + + KT V L W ++ + + I++ S EL P Q Sbjct: 484 YGVNGSIPKTLVKYLVEWVANNKV----DEASRATLLDIVDTPISPELIPADEHGNIKQK 539 Query: 479 DQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVEH----LLYGSE 526 ++ + PY + D + + S + Y+D T++ H + + Sbjct: 540 TEDLVGPYELHDFFLYHFLRFGASPAKIYFLAKRAFGETYDDATLKKWLHTFFRRFFQQQ 599 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYP---ISNKFRDHIS 560 +KR P G K+ + S D P ++ + D I+ Sbjct: 600 FKRSCLPDGPKVGSISLSPRGDWRMPSDAMATLWLDEIA 638 >gi|291458959|ref|ZP_06598349.1| putative NH(3)-dependent NAD(+) synthetase [Oribacterium sp. oral taxon 078 str. F0262] gi|291418213|gb|EFE91932.1| putative NH(3)-dependent NAD(+) synthetase [Oribacterium sp. oral taxon 078 str. F0262] Length = 666 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 139/664 (20%), Positives = 243/664 (36%), Gaps = 114/664 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + A+ V D N + EA +G L++ EL ++GY DL + + Sbjct: 6 FRAAVGTPEVRVADPDWNRERIAELCREAAEKGAGLLVLPELCLTGYTAGDLFLQSELQE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L S T + IV+G P + NS +L G ++ K NLPNYSEF+ Sbjct: 66 GALRALSWLLSKTRELPLLIVLGLPLSFSGKLYNSAAVLHRGRVLGFVPKKNLPNYSEFY 125 Query: 125 EKRTFISGYSN-------DPIV------------------FRDIRLGILICEDIWKNSNI 159 E+R F DP+ D L + +CED+W + Sbjct: 126 ERRWFSPAEDGIFEYLYRDPLTKDCCSLPFGMRLLFQAEDLPDFCLALELCEDLWVPNPP 185 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFD 217 GA + + +AS K R E++ + + +Y N G+ +L+F Sbjct: 186 STEHAAAGAYLIANCSASDETVGKADYRRELLRSASARICAAYLYANAGEGESTQDLVFG 245 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQW----NYMSDDSASTMYIPL---- 269 G S + + + + F+ ++E ++ + Y + + IP Sbjct: 246 GQSMIAEN-GSILAESRRFTTGLTISEIDLERIRQERTRLGTYPAPRAEGYRRIPFRFFE 304 Query: 270 ----------------------------------------QEEEADYNACVLSLRDYVQK 289 + E + L L+ + Sbjct: 305 GGRPSFLSGSSFSGGSGEDGSLFRRIDPHPFVPSSGEERARRCEEILSIQALGLKKRLSH 364 Query: 290 NNFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAK 344 + ++G+SGG+DS L + A +EN+ ++ +P T+ ++L++A + Sbjct: 365 IGTKQAVLGISGGLDSTLALLVTARAFDLLKIPRENILSVTMPAFGTTKRTLDNARRLTE 424 Query: 345 ALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 A+G + I V F + ++ +V EN Q+R R +LM LSN +++ Sbjct: 425 AIGATLREIDIRLSVEQHFRDIGHDAKKR--DVVYENAQARERTQVLMDLSNACGGIVVG 482 Query: 405 TSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSI 464 T + SE+++GY T GD + + KT V L + G L+E + I Sbjct: 483 TGDLSELALGYATYNGDHMSMYAVNAGVPKTLVRHLVRYIADIEKR---GALSETLL-DI 538 Query: 465 LEKSPSAELRP------HQTDQESLPPYPILDDIIKRIVENE-----------ESFINND 507 L+ S EL P Q +E + PY + D + +I+ +F D Sbjct: 539 LDTPVSPELLPPSGETISQKTEELVGPYELHDFFLYQILRFGFRPKKVYELALSAFYAGD 598 Query: 508 QE----YNDE----TVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRD 557 Y E ++ + ++KR P G K+ + S D P Sbjct: 599 SGTKPQYEREEILFWLKSFYRRFFSQQFKRSCLPDGPKVGSVSVSPRGDLRMPSDASAAL 658 Query: 558 HISE 561 +SE Sbjct: 659 WLSE 662 >gi|182419597|ref|ZP_02950844.1| glutamine-dependent NAD+ synthetase [Clostridium butyricum 5521] gi|237668266|ref|ZP_04528250.1| glutamine-dependent NAD(+) synthetase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376566|gb|EDT74142.1| glutamine-dependent NAD+ synthetase [Clostridium butyricum 5521] gi|237656614|gb|EEP54170.1| glutamine-dependent NAD(+) synthetase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 632 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 136/636 (21%), Positives = 237/636 (37%), Gaps = 90/636 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K+A A N V D+ NI + EAN +G I+F EL ++ Y DL ++ Sbjct: 1 MDFIKVASACPNTRVSDVDYNIENILKCITEANEKGCKFIVFPELSVTSYTCGDLFLQEH 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 + I L +T + I VG P + N IL G ++ + K +PNYS Sbjct: 61 LLNKSYEGIKNLLHNTSNLDMLIAVGAPLISGSILYNCAYILFKGKVLGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISG-----------------YSNDPIVFRD-IRLGILICEDIWKNSNICKHL 163 EF+EKR F G + D I + + ICED+W +L Sbjct: 121 EFYEKRWFTEGISITNQKVNLPFQKEIPFGVDLIFSSNLGNFAVEICEDLWVTIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS +K R +++ Q + IY + + +++F G Sbjct: 181 ALMGAHIIGNLSASNELVSKADYRRNLISNQSARSICSYIYSSAGVHESTTDVLFSGH-L 239 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD---------------------- 259 L + K F N + + D + M + Sbjct: 240 IISENGSLLSENKRFQRDNEIIYSYVDVFKLKAERMKNLSFRDASIFLNKTPSMINFQFT 299 Query: 260 ---------DSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 ++P E +N SL ++ + K ++G+SGG+D Sbjct: 300 NTEIKGFDRFIDKHPFVPSSEEERDLRCREIFNIQASSLAKRLEHTHSQKAVVGISGGLD 359 Query: 305 SALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S L + V K+N+ TI +P T+ ++ +A + LG + I Sbjct: 360 STLALLVIVKTFELLNLDKKNIVTITMPGFGTTDRTYNNALDLCRELGTDLREINIVKAS 419 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 F + + + EN+Q+R R ILM L+N +L+ T + SE+++G+ T Sbjct: 420 LQHFEDIGH--DKNIHDVTYENVQARERTQILMDLANKENGLLIGTGDLSELALGWCTYN 477 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---- 475 GD ++ + KT V L + + + IL+ S EL P Sbjct: 478 GDHMSMYSVNPSIPKTLVRYLVRYVAQNESN----EIVSNTLMDILDTPVSPELLPKDSN 533 Query: 476 ---HQTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ---EYNDE----TVRYVEH 520 Q ++ + PY + D + +++ +F+ +Y+ E + Sbjct: 534 GQISQKTEDIVGPYELHDFFLYHFIKHGSTKERIAFLAEHAFKDDYSKEEIGKWLDKFMF 593 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNK 554 + ++KR P G K+ + S D P Sbjct: 594 RFFTQQFKRSALPDGPKVGSISLSPRGDFRMPSDAH 629 >gi|220904026|ref|YP_002479338.1| NAD+ synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868325|gb|ACL48660.1| NAD+ synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 560 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 177/576 (30%), Positives = 283/576 (49%), Gaps = 38/576 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +KIA+ Q N V GD+AGN+ + A +A G +L + EL + G P + + F Sbjct: 1 MKIALLQCNSVTGDVAGNMQRILEASRQAAAAGAELCVTPELALCGVAPGHYLCAEDFAA 60 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQ---DQEGVLNSVVILDAGNIIAVRDKINLPN-- 119 C +A+D L + D G ++VG P + N+ V++D G+ K+ Sbjct: 61 GCRTALDLLALELRD-GPALLVGAPVPSVYASGLLSNAAVLVDKGSWQVASRKVYQGGAQ 119 Query: 120 --YSEFHEKRTFISGYSNDPIVFRDIRLGILICED-------IWKN-----SNICKHLKK 165 + + R F G S + R+G+++CED WK N L + Sbjct: 120 GMGPDTDDSRYFDRGISCGILTIGGWRMGVVLCEDARSEEEAFWKIRYASGHNPLMELVQ 179 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDG 225 +G + L + A+PY +++ + H+ + VN VGG D ++ G S FD Sbjct: 180 RGVDALVHMTAAPYSEGAQAAGEHMLSHVAARHHVHLFSVNLVGGNDSRVYSGQSLAFDP 239 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRD 285 QL + K F+E + E + + + EE ++A L RD Sbjct: 240 TGQLLARGKAFAEDVLVVETAGSAPGGASGGKAPEP-----LSSCVEENLWHALTLGTRD 294 Query: 286 YVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKA 345 +V+K KVI+GLSGG+DS+L +AV+ALG ENV +++P Y+S S+ DA + A+ Sbjct: 295 FVRKCGAEKVIVGLSGGMDSSLVCCVAVEALGAENVTGVLMPSPYSSEGSVSDAHSLAQN 354 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQ---FLQEEPSGIVAENIQSRIRGNILMALSNHSKAML 402 LG + LPI ++ F ++ P EN+Q+RIRG +L +L+N + A++ Sbjct: 355 LGIRTVTLPIESVMKVFEQALAPGLELFTSRPGDTTFENLQARIRGVVLSSLANRAGALV 414 Query: 403 LTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPP 462 L T NKSE ++GY TLYGD G + DL KTQ + +A W N + EVIP Sbjct: 415 LNTGNKSEAAMGYSTLYGDTVGALAVIGDLTKTQTYAVARWYNEYRQ-------AEVIPQ 467 Query: 463 SILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLL 522 + K+PSAELRP Q D++SLPPY LD +++ ++ S + + + V + L Sbjct: 468 QVFGKAPSAELRPGQKDEDSLPPYGQLDPVLEELLLPGAS--SAAANISPLRLE-VRNRL 524 Query: 523 YGSEYKRRQAPVGTKITAKSFGRDRLYPISNKFRDH 558 + +E+KRRQ P+ ++ FG P++ ++R Sbjct: 525 FAAEFKRRQEPLALFVSRVPFGAGWQAPVAGRYRLP 560 >gi|255015983|ref|ZP_05288109.1| NAD synthetase [Bacteroides sp. 2_1_7] Length = 640 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 128/639 (20%), Positives = 244/639 (38%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPHVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V G I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRGEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ-------------- 270 L + EQ ++E + + + + Sbjct: 246 GTLLKESERFSMEEQLVISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNRTL 305 Query: 271 --------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 E ++ V L + + ++G+SGG+DS L Sbjct: 306 DLTRAIDPHPFTPSGDALKERCEEIFHIQVAGLAKRILHAHAQTAVVGISGGLDSTLALL 365 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V ++ + I +P T+ ++ +A ++LG + I + F Sbjct: 366 VTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACVQHFKD 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 426 IDHDI--HVHDVTYENSQARERTQLLMDVANQANGLVIGTGDLSELALGWATYNGDHMSM 483 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QT 478 + + KT V L W ++ + + I++ S EL P Q Sbjct: 484 YGVNGSIPKTLVKYLVEWVANNKV----DEASRATLLDIVDTPISPELIPADEHGNIKQK 539 Query: 479 DQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVEH----LLYGSE 526 ++ + PY + D + + S + Y+D T++ H + + Sbjct: 540 TEDLVGPYELHDFFLYHFLRFGASPAKIYFLAKRAFGETYDDATLKKWLHTFFRRFFQQQ 599 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYP---ISNKFRDHIS 560 +KR P G K+ + S D P ++ + D I+ Sbjct: 600 FKRSCLPDGPKVGSISLSPRGDWRMPSDAMATLWLDEIA 638 >gi|282879644|ref|ZP_06288375.1| NAD+ synthetase [Prevotella timonensis CRIS 5C-B1] gi|281306592|gb|EFA98621.1| NAD+ synthetase [Prevotella timonensis CRIS 5C-B1] Length = 686 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 139/688 (20%), Positives = 252/688 (36%), Gaps = 133/688 (19%) Query: 1 MLKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF 58 M+ +K+A A V D N+ + + ++A QG+++I+F EL I+ Y +DL Sbjct: 1 MMNSGFVKVACAVPLVKVADCIYNVEQTKAQIQQAEEQGVEIIVFPELGITSYTCQDLFQ 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 +K ++A +I L T +VG P + +LN +++ G I+ V K LP Sbjct: 61 QKLLLEASEVSILHLLDFTRQLDVISIVGLPIVVGDLLLNCAMVIQRGQILGVIPKTYLP 120 Query: 119 NYSEFHEKRTFISGYSNDPIVFR-------------------DIRLGILICEDIWKNSNI 159 +YSEF+EKR F S R ++ G+ ICED+W Sbjct: 121 DYSEFYEKRWFASSQDLKETTIRYAGQNIVVTPDPQIYTTDDGVQFGVEICEDVWAPVPP 180 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFD 217 L GA+ +F+L+AS K +++ Q S IY G+ +L++ Sbjct: 181 SNTLALAGADLIFNLSASDAVIGKYDYLKSLLSQQSSRTITGYIYAASGYGESTQDLVYA 240 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFM----------------------TEWHYDQQLSQWN 255 G ++ L + K F+ ++ + + + SQ Sbjct: 241 GNGLIYEN-GVLLAEGKRFTMESQIHCAQIDIEMLRAERRINSTYVNAQRQVNTFASQRG 299 Query: 256 YMSDDSASTMYIPLQEEEADYNACV----------------------------------- 280 + S S + I Y C+ Sbjct: 300 FSSSLSPNQFAIFNNTSAIHYIPCIAPENETTFTLEREINPHPFVPAPNLLPDSCVEVLN 359 Query: 281 ---LSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTS 332 ++L + ++G+SGG+DS L + V K + + + +P T+ Sbjct: 360 IQTMALATRLSHIQAKTAVLGVSGGLDSTLALLVCVMTFDKLGLDRKGIIGVTMPGFGTT 419 Query: 333 PQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILM 392 ++ +A LG + I V F + + + EN Q+R R ILM Sbjct: 420 GRTYHNAMDLMHKLGITVKEINIEKSVMQHFEDIGH--DPQVQDVTYENSQARERTQILM 477 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSG 452 LSN +++ T + SE+++G+ T GD + + KT + L ++ H + Sbjct: 478 DLSNQLNGLVVGTGDMSELALGWATYNGDHMSMYAVNAGVPKTLLRHLVNYYAQHLAENQ 537 Query: 453 LGPLTEVIPPSILEKSPSAELRPH-------QTDQESLPPYPILDDIIKRIVE------- 498 I ++ S EL P Q ++ + PY + D + ++ Sbjct: 538 DIAK---ILLDVINTPISPELTPANEQGKIEQKTEDLVGPYELHDFFLYYVLRFGFRPSK 594 Query: 499 ----NEESFINNDQ---------------EYNDETVRYVE----HLLYGSEYKRRQAPVG 535 +++F + +Y++ET++ + ++KR P G Sbjct: 595 IFLLAKKAFAESMAQEGQPQPNDALQMKGQYDEETIKKWLKVFFKRFFSQQFKRSCLPDG 654 Query: 536 TKITAKSFGR--DRLYPISNKFRDHISE 561 K+T+ S D P R + E Sbjct: 655 PKVTSVSLSPRGDWRMPSDAISRLWLEE 682 >gi|313158587|gb|EFR57981.1| NAD+ synthase [Alistipes sp. HGB5] Length = 683 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 132/629 (20%), Positives = 227/629 (36%), Gaps = 86/629 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+A A + VGD N + EEA ++G++++ F EL ++ Y DL+ + + Sbjct: 45 LKVAAAVPHVRVGDCDFNTERIAAMAEEAAQRGVEIVAFPELAVTAYTCADLLLLPALLD 104 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L T I+ G P + + N V+ G ++ V K +P+Y+EF+ Sbjct: 105 AADEALARLVKATRKLPLVIIAGAPLRHGSTLYNCAVVFTQGRVLGVVPKTYIPDYTEFY 164 Query: 125 EKRTFISGYSND-----------------PIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E R F SG G+ ICED+W HL G Sbjct: 165 ENRWFASGAGISEETISVAEQSADFGADLTFGINGTEFGVEICEDLWTAIPPSSHLALNG 224 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A+ +F+L+ASP K ++V Q + +Y + G+ +L+F G + Sbjct: 225 AKVIFNLSASPESVGKHAYLRQLVAQQSARTLAGYVYCSAGFGESSTDLVFAGNGIVAEN 284 Query: 226 QQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNYMS-------------------------- 258 + L + EQ + + + + + Sbjct: 285 GRILRESGRFRLEEQLVVADIDIQRLEFERRRNTSFRMHEGAAENTVIEMEVPEGLRAAA 344 Query: 259 --DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 D ++P E E + L + K +IG+SGG+DS L Sbjct: 345 LDRDIDPMPFVPQDEAHRSERCEEIFQIQSHGLAKRLVHTRCEKAVIGISGGLDSTLALL 404 Query: 311 IAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V K + I +P T+ ++ +A + LG +PI D FS Sbjct: 405 VTVRTFDKLGLDRAGIIGITMPGFGTTDRTYNNALELMRGLGVTIREIPIRDACTQHFSD 464 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + L E EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 465 IG--LDPEDRSAAYENSQARERTQILMDVANMEGGLVVGTGDLSELALGWATYNGDQMSM 522 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQT 478 + + KT V L W +++ S EL P Q Sbjct: 523 YGVNASVPKTLVRHLVKWVADTESDM----AARATLLDVIDTPVSPELLPADKEGKIAQK 578 Query: 479 DQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVEHL----LYGSE 526 ++ + PY + D + + Y+ T+ + + + Sbjct: 579 TEDLVGPYELHDFFLYNFIRAGYGPAKILFLAEQAFHGSYDRATILKWLTVFFRRFFSQQ 638 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYPISN 553 +KR P G K+ + + D P Sbjct: 639 FKRSAMPDGPKVGSAALSPRGDWRMPSDA 667 >gi|224541818|ref|ZP_03682357.1| hypothetical protein CATMIT_00990 [Catenibacterium mitsuokai DSM 15897] gi|224525241|gb|EEF94346.1| hypothetical protein CATMIT_00990 [Catenibacterium mitsuokai DSM 15897] Length = 634 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 127/623 (20%), Positives = 239/623 (38%), Gaps = 80/623 (12%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + ++ N + R +EAN +++ EL ++GY EDL F+K + Sbjct: 8 IRVAAGSFKVSIANVKKNAQEIIRLSKEANANHTQVLVLNELCLTGYTIEDLFFQKRVLN 67 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + +T D IV+G P + + N ++L G+I+ K +PNY EF+ Sbjct: 68 ESETQLQYILDETKDLDTVIVIGMPLVIRNDLYNCALVLHRGDILGAVPKTYIPNYHEFY 127 Query: 125 EKRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 E R F SG + + +++G+ ICED+W Sbjct: 128 EGRHFKSGRDLDEYITLCDQEIHVTTEQLFEDVNHPWLKIGVEICEDVWAPHTPSTDACL 187 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R +++ + + +Y N G+ +++F + Sbjct: 188 NGATLIVNPSASNNLTGKSDYRRSLISATSARLVCGYVYSNTGVGESTTDVVFSNHHLIY 247 Query: 224 DGQQQLAFQ--------------MKHFSEQNFMTEWHYDQQLSQWNYMSDDS-------- 261 + L K +E+ MT + + +M DD Sbjct: 248 ENGTLLKESTQYSTGLIYADMDLEKIHTERIEMTTYESEDYFDAVPFMLDDEELDLDRYY 307 Query: 262 ASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA 315 ++P E +N L ++ + KV++G+SGG+DS L + A Sbjct: 308 DPHPFVPSDKEKRAARCEEVFNIQTHGLMQRLEAAHIKKVVVGMSGGLDSTLALLVMHKA 367 Query: 316 LGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL 370 ++ + +P T+ ++L +A K L + I D VN F ++ Sbjct: 368 YKMLGRPVSDIIAVTMPCFGTTDRTLNNALTLMKELEVTSMTVNIKDAVNQHFKDINH-- 425 Query: 371 QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLK 430 E + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD + Sbjct: 426 NPEVHDVTYENCQARERTQVLMDIANQAGGIVVGTGDLSEVALGWSTYNGDHMSMYGVNV 485 Query: 431 DLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQESLP 484 + KT V L + T G + E IL S EL P Q ++ + Sbjct: 486 SVPKTLVRYLVDYV----STLYKGEVLEATLQDILHTPVSPELLPAKDGEITQKTEDIVG 541 Query: 485 PYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYKRRQA 532 PY + D + + +Y++ T++ + ++KR Sbjct: 542 PYELHDFFLYHHARFHYEPQKLLRIAIHTYGDKYDEATIKKWLTLFYRRFFTQQFKRSCI 601 Query: 533 PVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 602 PDGPKVGSVALSPRGDLRMPSDA 624 >gi|218261602|ref|ZP_03476348.1| hypothetical protein PRABACTJOHN_02016 [Parabacteroides johnsonii DSM 18315] gi|218223916|gb|EEC96566.1| hypothetical protein PRABACTJOHN_02016 [Parabacteroides johnsonii DSM 18315] Length = 641 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 128/639 (20%), Positives = 235/639 (36%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V D NI K +A+ +G+ +I F EL ++ Y DL +++ + Sbjct: 6 VKVAAAVPHIQVADCFYNIEKIEGLMRQASEKGVQIIAFPELSVTAYTCLDLFAQQTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ L S+T D +VG P + ++N+ V+ G I V K LPNY EF Sbjct: 66 GAETALLQLVSNTADLNILAIVGVPLRTGNQLINAAVVFQKGVIRGVVPKTYLPNYKEFQ 125 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F S + +GI ICED+W L +G Sbjct: 126 EQRWFTSATELRTSTISIGEEEYPMGSHLLFRSGQLTIGIEICEDLWVPVPPSSLLAMEG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANIIFNLSASNELIGKHTYLRSLICQQSARCMAGYVYASSGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMS------------------------- 258 L + F EQ ++E + + + Sbjct: 246 -GNLLAESPRFTMEEQLVISEIDIETLQNDRQVNTSFMYGASGLLKEKAQVVDFQVRTPD 304 Query: 259 -----DDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + P + E ++ V L + + ++G+SGG+DS L Sbjct: 305 GFSLTRPIDPHPFTPSGDALKERCEEIFHIQVAGLAKRLIHAHAQTAVVGISGGLDSTLA 364 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V + + I +P T+ ++ +A ++LG + I + F Sbjct: 365 LLVTVMTFDALKIPRGQIIGITMPGFGTTDRTYTNACDLIRSLGVTLKEISIKEACLQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + EN Q+R R +LM ++N +++ T + SE+++G+ T GD Sbjct: 425 RDIDH--GPSVHDVTYENSQARERTQLLMDVANQKNGLVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L W ++ + + + I+ S EL P Sbjct: 483 SMYGVNGSIPKTLVKYLVEWVANYKV----DDASRLTLLDIVATPISPELIPADENGNIK 538 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HLLYG 524 Q ++ + PY + D + + + Y++ T++ + Sbjct: 539 QKTEDLVGPYELHDFFLYHFLRFGSHPSKIYFLAQKAFAGTYDNATIKKWLYTFFRRFFQ 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 ++KR P G K+ + S D P R + E Sbjct: 599 QQFKRSCLPDGPKVGSVSLSPRGDWRMPSDAVSRLWLEE 637 >gi|319934765|ref|ZP_08009210.1| NAD+ synthetase [Coprobacillus sp. 29_1] gi|319810142|gb|EFW06504.1| NAD+ synthetase [Coprobacillus sp. 29_1] Length = 635 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 117/622 (18%), Positives = 237/622 (38%), Gaps = 83/622 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ A + +G++ N + + +A+ + + ++LF EL ++GY EDL ++K + Sbjct: 6 VRVGCASFDMKLGNVKANADQIIKYAHKASEEHIKILLFPELCLTGYTIEDLFYQKRVLN 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + ++ + T++ +V+G P + N + L G I+ V K +P Y EF+ Sbjct: 66 EVTQQLEHILDATYELDLFMVIGAPFIHMNKLYNCAIALCGGEILGVIPKTYIPTYHEFY 125 Query: 125 EKRTFISGYSNDP-------------------IVFRDIRLGILICEDIWKNSNICKHLKK 165 E R F S +++ + ICED+W Sbjct: 126 EGRHFASAPQECTEIMINGDYISFGTDIIFESFHHEHLKIAVEICEDLWAPLPPSTKHCL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS +K R +V+ + + Y N G+ +++F Sbjct: 186 NGATLILNPSASNDLTSKSDYRRLLVSSHSARLICGYAYCNAGLGESTTDVVFSNHHIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQ---QLSQWNYMSDDSASTMYIPL----------- 269 + L + + ++ D+ + + + + +IP Sbjct: 246 EN-GTLLEESVQYETGLIYSDIDLDKLVSERIEMSTYETRNDHYHFIPFEIDTEDLELER 304 Query: 270 ----------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 + ++ + L ++ + KV+IG+SGG+DS L +A Sbjct: 305 YYNPYPFVPSDTEQRAMRCKEVFDIQMHGLIQRLKAAHIQKVVIGISGGLDSTLALLVAS 364 Query: 314 DALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A K +++ + +P T+ ++ +A + L + I V F + Sbjct: 365 MAYKKLGYPSQDIIAVTMPCFGTTSRTKNNALKMMEELKVTSLTVDITAAVKQHFKDIHH 424 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 E + EN Q+R R +LM ++N +++ T + SE+++G+ T GD + Sbjct: 425 --DENVHDVTYENSQARERTQVLMDIANQEGGIVIGTGDLSEVALGWSTYNGDHMSMYAV 482 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQES 482 + KT V L + T G E + IL+ S EL P Q ++ Sbjct: 483 NVSVPKTLVRYLVDYV----STLYKGQPLESVLQDILDTPVSPELLPAKDNEIVQKTEDI 538 Query: 483 LPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYKRR 530 + PY + D + V + + ++Y+ ET++ + ++KR Sbjct: 539 VGPYELHDFFLYHHVRFHYEPRKLYRIACLAYQEKYDQETIKKWLTLFYRRFFTQQFKRS 598 Query: 531 QAPVGTKITAKSFGR--DRLYP 550 P G K+ + + D P Sbjct: 599 CIPDGPKVGSVALSPRGDLRMP 620 >gi|221195361|ref|ZP_03568416.1| glutamine-dependent NAD+ synthetase [Atopobium rimae ATCC 49626] gi|221184548|gb|EEE16940.1| glutamine-dependent NAD+ synthetase [Atopobium rimae ATCC 49626] Length = 657 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 125/638 (19%), Positives = 239/638 (37%), Gaps = 93/638 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +K+A V D+ N+ + ++A +I+ EL I+GY EDL ++ + Sbjct: 6 VKVAAITPKVRVADVTYNVESCLSSIKKAYAEHEARVIVLPELCITGYTCEDLFWQDELL 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A S + ++ T D A ++VG P + + N +L G ++ + K N+P Y+EF Sbjct: 66 DAAESGLASIALHTFDVDALVLVGLPVRVASKLYNCAAVLYGGEVLGLVPKQNIPMYNEF 125 Query: 124 HEKRTFISGYSNDPIV----FRDIRLGI----------------LICEDIWKNSNICKHL 163 +E R F +G V F +I G ICED+W + Sbjct: 126 YEGRHFTAGPEVVTSVDFSIFGEIPFGANQLFSCESLPELVVAAEICEDLWVANPPSVAH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+ASP K + R +V+ Q + + +Y G+ +L+F G + Sbjct: 186 AMAGATLICNLSASPAIAGKAEYRRSLVSNQSARLVCGYLYAGSGEGESTTDLVFSGHNL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS-------------------- 261 + + F++ ++E +++ +S Sbjct: 246 ICEN-GHILADTGCFTDGIAVSEIDVASLVAERRRLSTFFVAPSPEDARHIVTYVALDFE 304 Query: 262 ---------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 ++P + E + L + +V++G+SGG+DS Sbjct: 305 DMTKLTRFVDPRPFVPASDDRRAERCEEVLSIQAHGLATRLAHTGSQRVVVGISGGLDST 364 Query: 307 LCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + V A + + + +P T+ ++ +A A+ LG + + I V Sbjct: 365 LALLVTVRAFDQLGLDRGGIVAVTMPGFGTTDRTYTNAVRLARTLGAELREISITAAVRQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 F + E + EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 425 HFIDIGH--DEANHDVTYENAQARERTQILMDVANQVRGMVIGTGDLSELALGWATYNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V L + + + + I +L+ S EL P Sbjct: 483 QMSMYGVNASVPKTLVRHLVHYCADSYMQTDEKDAAD-ILYDVLDTPVSPELLPANADGS 541 Query: 476 -HQTDQESLPPYPILDDIIKRIVENEESF-----------------INNDQEYNDETVRY 517 Q ++ + PY + D + ++ + S + ++ Sbjct: 542 IDQKTEDLVGPYELHDFFLYHVLRHGSSPHKVFRLACYAFEAGTSGEKYSKGAILAWLKV 601 Query: 518 VEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + + D P Sbjct: 602 FYRRFFAQQFKRSAMPDGPKVGSVALSPRGDLRMPSDA 639 >gi|77919810|ref|YP_357625.1| NAD synthetase [Pelobacter carbinolicus DSM 2380] gi|77545893|gb|ABA89455.1| NH(3)-dependent NAD(+) synthetase [Pelobacter carbinolicus DSM 2380] Length = 652 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 142/631 (22%), Positives = 243/631 (38%), Gaps = 90/631 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I + V D+A N + R+ E LF EL ++ Y DL F+ + Sbjct: 11 VRIGVCTPATKVADVAYNCEQIRKLVAETPD--CRFFLFPELCLTAYTCADLFFQPLLVD 68 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 AI L T + +VVG P + + N V L G I+ + K LPN EF+ Sbjct: 69 QARKAIVQLAEFTAEHRVTMVVGAPIAHRGRLFNCAVFLSGGRILGIVPKRFLPNTQEFY 128 Query: 125 EKRTFISGYS---------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 E+R F S + ++FR D +GI ICED+W + L Sbjct: 129 EERWFSSAADLTATELMWDGESIPFGNDLLFRAEGLPDCMIGIEICEDVWVANPPSGQLA 188 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+ASP K++ R +V Q + +Y + G+ +L+F G S Sbjct: 189 VAGANVLLNLSASPELLGKMEYRRALVQNQSARCLAAYVYASSGPGESSTDLVFSGHSLI 248 Query: 223 FDGQQQLAFQMK-HFSEQNFMTEWHYDQQLSQW--------------------------- 254 + LA + F Q + + ++ +++ Sbjct: 249 AENGTILAETERFRFDSQIAVADVDIERLVNERFKNNSYGGARSDASYRVIDFLLTDVTT 308 Query: 255 NYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + A+T ++P E + L + +V+IG+SGG+DS L Sbjct: 309 ERLRRPVAATPFVPPVEEERAHRCHEIFEIQTTGLAKRLLHTGAKRVVIGISGGLDSTLA 368 Query: 309 AAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V A + ++TI +P T+ ++ +A A+ LG V+ I V F Sbjct: 369 LLVTVKAFDKLGYDRSGIETITMPGFGTTQRTRGNAERLAELLGTGLRVISIDAAVRQHF 428 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + E I EN Q+R R ILM ++N +L+ T + SE+++G+ T GD Sbjct: 429 ADIGH--DETVHDITYENSQARERTQILMNVANQVGGLLIGTGDLSELALGWCTYNGDHM 486 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------- 476 + + KT V L +W + + I + + S EL P Sbjct: 487 SMYAVNTGVPKTLVRYLVAWCADAEFSGDISA----ILHDVCDTPVSPELLPPHENGEIK 542 Query: 477 QTDQESLPPYPILDDIIKRIVENE----ESFINNDQEYNDE--------TVRYVEHLLYG 524 Q ++ + PY + D + +V + + F Q + D+ ++ + Sbjct: 543 QRTEDKVGPYLLHDFYLYHVVRLQHRPSKIFFLARQAFGDQFTAREILHWLQTFYRRFFS 602 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + D P Sbjct: 603 QQFKRSCLPDGPKVGSVVLSPRGDWRMPSDA 633 >gi|301308821|ref|ZP_07214773.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 20_3] gi|300833345|gb|EFK63963.1| glutamine-dependent NAD+ synthetase [Bacteroides sp. 20_3] Length = 640 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 128/639 (20%), Positives = 243/639 (38%), Gaps = 89/639 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D NI + +A+++ + +I F EL ++ Y DL +++ ++ Sbjct: 6 VKVAAAVPQVKVADCFYNIQQIEGLMRQASQKEVQIIAFPELSVTSYTCMDLFSQETLLR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L ++T D +VG P ++N+ V I+ V K LP+Y EF Sbjct: 66 NAEKALLDLVNNTADLDLLTIVGCPLVSGSQLINAAVAFQRSEILGVVPKSYLPSYKEFQ 125 Query: 125 EKRTFIS-----------GYSNDP------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E+R F + G P + ++R+GI ICED+W L QG Sbjct: 126 EERWFTASSHLQQSMITIGNREVPLDCYLIFEYDEVRVGIEICEDLWVPIPPSSELAMQG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K ++ Q + +Y + G+ +L+F G + Sbjct: 186 ANLIFNLSASNELIGKHAYLRSLICQQSARCIAGYVYASAGFGESSTDLVFAGNGIIAEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQ-------------- 270 L + EQ ++E + + + + Sbjct: 246 GTLLRESERFSMEEQLVISEIDIQNLQNDRRINTSFMQGYLNHNMDNGTVVSFSLPNRTL 305 Query: 271 --------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 E ++ V L V + ++G+SGG+DS L Sbjct: 306 DLTRAIDPHPFTPSGDALKERCEEIFHIQVAGLAKRVLHAHAQTAVVGISGGLDSTLALL 365 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V ++ + I +P T+ ++ +A ++LG + I + F Sbjct: 366 VTVMTFDALKIPRDKIIGITMPGFGTTDRTYTNACDLIRSLGVTLREISIKEACIQHFKD 425 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 ++ + + EN Q+R R +LM ++N + +++ T + SE+++G+ T GD Sbjct: 426 INHDI--HVHDVTYENSQARERTQLLMDVANQANGLVIGTGDLSELALGWATYNGDHMSM 483 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QT 478 + + KT V L W ++ + + I++ S EL P Q Sbjct: 484 YGVNGSIPKTLVKYLVEWVANNKV----DEASRATLLDIVDTPISPELIPADEHGNIKQK 539 Query: 479 DQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVEH----LLYGSE 526 ++ + PY + D + + S + Y+D T++ H + + Sbjct: 540 TEDLVGPYELHDFFLYHFLRFGASPAKIYFLAKRAFGETYDDSTLKKWLHTFFRRFFQQQ 599 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYP---ISNKFRDHIS 560 +KR P G K+ + S D P ++ + D I+ Sbjct: 600 FKRSCLPDGPKVGSISLSPRGDWRMPSDAMATLWLDEIA 638 >gi|198276466|ref|ZP_03208997.1| hypothetical protein BACPLE_02661 [Bacteroides plebeius DSM 17135] gi|198270554|gb|EDY94824.1| hypothetical protein BACPLE_02661 [Bacteroides plebeius DSM 17135] Length = 646 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 128/620 (20%), Positives = 238/620 (38%), Gaps = 90/620 (14%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDT 77 D N + + A+ +G+ +I+F EL ++GY DL + ++ A+ + ++T Sbjct: 19 DCKFNAQQTEKQIVIADGKGIQIIVFPELNLTGYSCGDLFAQSLLLEQAELALMQIVNNT 78 Query: 78 HDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY---- 133 +VG P ++N V+ G I+ + K LPNY EF+EKR F S Sbjct: 79 RQLDIISIVGMPVVVNSTLMNCAVVFQKGKILGIVPKTYLPNYKEFYEKRWFTSAVAHPD 138 Query: 134 --------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPY 179 +N D+ GI +CED+W L +GAE +F+L+A Sbjct: 139 SMNVRLCGQVVPMGTNLLFDTPDVCFGIELCEDVWAPVPPSSALALKGAEIIFNLSADTE 198 Query: 180 YHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKH-F 236 +K + ++ Q + ++ + G+ +++F G + ++ LA + F Sbjct: 199 NISKHQYLRSLLAQQSARCLAGYVFSSCGFGESTTDVVFAGNALIYENGSLLAASDRFSF 258 Query: 237 SEQNFMTEWHYDQQLSQWNYMSDDSA-------------------------------STM 265 EQ ++E ++ + + S+ Sbjct: 259 EEQLVVSEIDVERLRGERLTNTTFSSSVRMYRDQHPMQHISTALVASRDLTLTRSVEPHP 318 Query: 266 YIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKE 319 ++P E E ++ V L + N V++G+SGG+DS L + V K Sbjct: 319 FVPSGERQLDERCEEIFSIQVAGLAKRLVHTNCKTVVLGISGGLDSTLALLVCVKTFDKL 378 Query: 320 N-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEP 374 N + + +P T+ ++ +A + +L + I D F + Q + Sbjct: 379 NLSRKGIVGVTMPGFGTTDRTYHNALSLMSSLQVTTKEISIKDACIQHFQDIGQDMS--V 436 Query: 375 SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYK 434 + EN Q+R R ILM +N +++ T + SE+++G+ T GD + + K Sbjct: 437 HDVTYENGQARERTQILMDYANKIGGLVIGTGDLSELALGWATYNGDHMSMYGVNASIPK 496 Query: 435 TQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QTDQESLPPYP 487 T V L +W G+ + L+ I++ S EL P Q ++ + PY Sbjct: 497 TLVRYLVNWVAQTGVDT----LSRNTLLDIIDTPISPELIPADENGNIKQKTEDLVGPYE 552 Query: 488 ILDDIIKRIVENE--------ESFINNDQEYNDETVRYV----EHLLYGSEYKRRQAPVG 535 + D + + + I Y+ T++ + ++KR P G Sbjct: 553 LHDFFLFHFLRFGFRPAKIFYLAEIAFRGVYDSTTIKKWLTNFYRRFFAQQFKRSCLPDG 612 Query: 536 TKITAKSFGR--DRLYPISN 553 K+ + S D P Sbjct: 613 PKVGSVSLSPRGDWRMPSDA 632 >gi|169334890|ref|ZP_02862083.1| hypothetical protein ANASTE_01296 [Anaerofustis stercorihominis DSM 17244] gi|169257628|gb|EDS71594.1| hypothetical protein ANASTE_01296 [Anaerofustis stercorihominis DSM 17244] Length = 637 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 138/639 (21%), Positives = 248/639 (38%), Gaps = 90/639 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A V + + N + +EA ++G + + EL IS Y DL F+ + ++ Sbjct: 7 IKVACGVPKVKVANPSYNTNEIYNLVKEAKKEGAKIFITPELSISSYTCADLFFQDTLLE 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C ++ L T D IVVG P + + + N V G I+ V K +P +SEF+ Sbjct: 67 KCEEELEKLVEKTADDDIFIVVGMPIKYKNALYNCAVAFLNGEILGVIPKEFIPTHSEFY 126 Query: 125 EKRTFISGYS--------NDPIVF--------RDIRLGILICEDIWKNSNICKHLKKQGA 168 EKR F SG + F +D+ +GI +CED+W L GA Sbjct: 127 EKRWFASGKDVSDELSLAGQEVFFGQMLFKLRKDLTVGIEVCEDLWVPIAPSAKLALSGA 186 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQ 226 + +++AS +K + R +++ Q + YV+ + +L+F G+S + Sbjct: 187 NLILNISASNEVVSKDEYRTNLISSQSAKCLCAYAYVSAGVHESTTDLLFGGSSLIAEN- 245 Query: 227 QQLAFQMKHFSEQNFMTEWHYD----QQLSQWNYMSDDS--------------------- 261 + + K F +N +T + D + N DS Sbjct: 246 GIILNKGKRFERENQLTSAYIDLQKLNFQRRQNISFSDSREQYEEFYEEIECEFENDIDI 305 Query: 262 -------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 + P E +N +L ++ K+++G+SGG+DS L Sbjct: 306 TEFDRFVDPHPFTPNDENQRIERCNEIFNIQSSALAKRLEHTGLKKLVVGISGGLDSTLA 365 Query: 309 AAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 +A + EN+ I +P T+ ++ +A K+L + I + Sbjct: 366 LLVATQTMKLLNLPSENIIGITMPGFGTTDRTYTNALDLMKSLNVTIKEISIKEAATLHM 425 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + + EN Q+R R +LM ++N + A+L+ T + SE+++G+ T GD Sbjct: 426 KDIEHDIN--IHDVTYENTQARERTQVLMDMANKNGAILVGTGDLSEMALGWCTYNGDHM 483 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------H 476 + + KT V L T+ I IL+ S EL P Sbjct: 484 SMYGVNASVPKTLVSHLVRTVAMIS-----DDKTKDILLDILDTPVSPELLPPTKDGKIA 538 Query: 477 QTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVE----HLLYG 524 Q ++++ PY + D + + + + +Y+DET+ + Sbjct: 539 QKTEDNIGPYELHDFFLYYFIRFGAKKDKLHFLAKQAFKDKYSDETIEKWLNNFMKRFFI 598 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 S++KR P K+ + S D P F + + Sbjct: 599 SQFKRSCTPDAPKVGSVSLSPRGDFRMPSDADFSAWLED 637 >gi|317132891|ref|YP_004092205.1| NAD+ synthetase [Ethanoligenens harbinense YUAN-3] gi|315470870|gb|ADU27474.1| NAD+ synthetase [Ethanoligenens harbinense YUAN-3] Length = 644 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 133/636 (20%), Positives = 234/636 (36%), Gaps = 86/636 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ V D A N R E+A + L++F EL ++GY DL ++ + Sbjct: 6 IRAAVVSPRITVADCAENARVIGRWMEQAEGKQAGLVVFPELCLTGYTCGDLFLHQTLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A SA++TL ++ A +VVG P + + + N +L G ++ V K LPNY+EF+ Sbjct: 66 AAESALETLLKESRGFDAVMVVGLPVR-RTKLYNCAAVLHRGRLLGVVPKTYLPNYAEFY 124 Query: 125 EKRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKK 165 E+R F SG V D G+ ICED+W L Sbjct: 125 EQRHFTSGVRAGGTVTLAGQEAPFGTDLLFACENLPDFVFGVEICEDVWVPVPPSCRLAL 184 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K IV Q +Y G+ +L+F G Sbjct: 185 AGATVIANLSASTQVAGKAAYLRGIVGTQSGRCISGYLYAGSGEGESSTDLVFSGHLIVA 244 Query: 224 DGQQQLAFQMKH-------------FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP-- 268 + + L + E+ T + + + + Y P Sbjct: 245 ENGRILEEREGGEGMLAADLDMQLLAEERRRTTSFGAEGEAGGCRRVPFRLTPVRYAPLL 304 Query: 269 ----------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + + + L + ++ +SGG+DS L +A Sbjct: 305 RLVGRHPFVPPEGERYRERCKEVLDIQTAGLAKRLAHTRAKTAVVAVSGGLDSTLALLVA 364 Query: 313 VDALGKEN----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A+ + I +P TS ++ +A A +++G V+PI V + + Sbjct: 365 HRAIENAGLSCAITAITMPGPGTSGRTRGNADALCRSIGATLKVIPISGAVEGHLADIGH 424 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + EN Q+R R I M +SN +++ T + SE+++G+ T GD + Sbjct: 425 ---DGSPDTAFENAQARERMQIAMDVSNMEGGIVVGTGDMSELALGFTTYNGDHMSMYGV 481 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQES 482 + KT V L + + L T IL+ S EL P Q ++ Sbjct: 482 NAGVPKTLVRHLIRYVADENAENTLLRDT---LYDILDTPVSPELLPAKDGDIPQKTEQI 538 Query: 483 LPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRY----VEHLLYGSEYKRR 530 L PY + D + + +F+ Y + +R + +++KR Sbjct: 539 LGPYELHDFFLYYFLRFGFSPEKILRLAFLAFADAYEETEIRQRLADFLRRFFAAQFKRS 598 Query: 531 QAPVGTKITAKSFGR--DRLYP---ISNKFRDHISE 561 P G K+ + + D P ++ + + + Sbjct: 599 CLPDGPKVGSVALSPRGDWRMPSDAVARAWLNRLEN 634 >gi|298372069|ref|ZP_06982059.1| glutamine-dependent NAD+ synthetase [Bacteroidetes oral taxon 274 str. F0058] gi|298274973|gb|EFI16524.1| glutamine-dependent NAD+ synthetase [Bacteroidetes oral taxon 274 str. F0058] Length = 637 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 127/616 (20%), Positives = 237/616 (38%), Gaps = 82/616 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + +A+ G++++ F EL ++ Y DL K SF+ Sbjct: 6 VRVAAAVPLVKVADCKENSERILGLIRQADSAGVEIVCFPELSVTAYTCADLFLKSSFVA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L S T D +VG P + N V G I+ V K LPN +EF+ Sbjct: 66 QAERALAFLLSQTEDLNIVSIVGLPVAADNRLFNCAVAFQRGKILGVVPKSYLPNSNEFY 125 Query: 125 EKRTFISGYSNDP-----------------IVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E R F SG P R++ I IC+D+W +G Sbjct: 126 EYRWFASGLGLAPKDITLAGQQCCLCANTLFRSRELSFSIEICQDLWAVVPPSSKQALEG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 + +F+L+AS K R +V + +Y + G+ +++F ++ + Sbjct: 186 SHIIFNLSASDELAGKNDYRRTLVAQHSGRCNAGYVYASAGFGESSTDVLFASSAIIAEN 245 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYM--------------------------- 257 LA + F +Q +TE ++ + + Sbjct: 246 GVILAESNRFSFDQQLVITEIDIERLRNDRLHNDSFKNYVSEANLWRVHSFEIKEIGSLD 305 Query: 258 -SDDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 + + + ++P + ++ +L + K +IG+SGG+DS+L + Sbjct: 306 LTREVSKHPFVPAGDKLDERCCEIFDIQSNALAIRLANTGIDKAVIGISGGLDSSLALMV 365 Query: 312 AVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 V+A + N+ I +P T+ ++ +++ ++LG + I V F + Sbjct: 366 TVEAFDKLSIPRSNIIGITMPGFGTTSRTEDNSMVLMESLGISARRISIEKAVMQHFVDI 425 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 ++ EN Q+R R ILM ++N A+++ T + SE+++G+ T GD + Sbjct: 426 GH--NKDIHDTTYENSQARERTQILMDVANKEGALVVGTGDMSELALGWCTYNGDHISMY 483 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQ 480 + KT V L W T I +L+ S EL PH Q + Sbjct: 484 GVNSGVPKTLVRHLVEWAARCKSDG----ETAKILLDVLDTPISPELLPHSNDSISQKTE 539 Query: 481 ESLPPYPILDDIIKRIVENEE--------SFINNDQEYNDETVRYVEH----LLYGSEYK 528 + + PY + D + + + + + +Y+ E ++ + + ++K Sbjct: 540 DIVGPYELHDFFLYHFLRFGYNADKMLLFAKKSFENDYSVENIKKWLNVFLSRFFSQQFK 599 Query: 529 RRQAPVGTKITAKSFG 544 R P G K+ Sbjct: 600 RSCMPDGVKVGNIDLS 615 >gi|224540762|ref|ZP_03681301.1| hypothetical protein BACCELL_05676 [Bacteroides cellulosilyticus DSM 14838] gi|224517629|gb|EEF86734.1| hypothetical protein BACCELL_05676 [Bacteroides cellulosilyticus DSM 14838] Length = 667 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 128/630 (20%), Positives = 237/630 (37%), Gaps = 87/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N + + A +G+ +I F EL ++GY DL ++ ++ Sbjct: 31 VKVAAAVPRVKVADCKFNAREIEKEIIIAEGKGVQIIAFPELCVTGYTCGDLFAQQLLLE 90 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + S+T ++G P +LN+ V++ G ++ V K LPNY EF+ Sbjct: 91 EAEMGLIQIVSNTRQLDIIAILGMPIAMNGVLLNAAVVIQKGKVLGVVPKTYLPNYKEFY 150 Query: 125 EKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S ++ D GI ICED+W L QG Sbjct: 151 EKRWFTSAVDVSERSVRLCGQVVPMGTDLLFETADTTFGIEICEDLWAPIPPSSSLALQG 210 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE LF+L+A K +++ Q + ++ + G+ +++F G F+ Sbjct: 211 AEILFNLSADNEGIGKHNYLCSLISQQSARCIAGYVFCSCGFGESTTDVVFAGNGLIFEN 270 Query: 226 QQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------- 271 +A + F Q ++E + ++ + SA + E Sbjct: 271 GSLIARSKRFSFEGQVIISEIDVEHLRTERRVNTTFSACRAHCAPGEAVRVSTEYVNSKE 330 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 E ++ V L + ++G+SGG+DS L Sbjct: 331 LNLTRCFDPHPFVPQGVELNERCEEIFSIQVSGLAQRLVHTAAKSAVVGISGGLDSTLAL 390 Query: 310 AIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + V ++++ + +P T+ ++ +A +LG + I + F Sbjct: 391 LVCVKTFDKLGWSRKDIIGVTMPGFGTTDRTYTNALDLMNSLGITVREVSIKEACIQHFK 450 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + + V EN Q+R R ILM ++N + M++ T + SE+++G+ T GD Sbjct: 451 DIDHDIDVHDV--VYENAQARERTQILMDIANQTWGMVIGTGDLSELALGWATYNGDHMS 508 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------Q 477 + + KT V L W + + + + I++ S EL P Q Sbjct: 509 MYGVNGSVPKTLVKYLVKWVAEN----DMDEASRMTLLDIVDTPISPELIPADENGNIKQ 564 Query: 478 TDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEH----LLYGS 525 ++ + PY + D + + + Y++ET++ + Sbjct: 565 ITEDLVGPYELHDFFLYYFLRCGFRPSKIFFLAVRTFKDVYDEETIKKWLQTFFRRFFNQ 624 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + S D P Sbjct: 625 QFKRSCLPDGPKVGSISISPRGDWRMPSDA 654 >gi|302874477|ref|YP_003843110.1| NAD+ synthetase [Clostridium cellulovorans 743B] gi|307690916|ref|ZP_07633362.1| NAD synthetase [Clostridium cellulovorans 743B] gi|302577334|gb|ADL51346.1| NAD+ synthetase [Clostridium cellulovorans 743B] Length = 634 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 139/637 (21%), Positives = 231/637 (36%), Gaps = 90/637 (14%) Query: 2 LKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKS 61 + +K++ A VGDI N + E A + I+F EL ++ Y DL + Sbjct: 1 MNFIKVSSACPVTKVGDIKYNYEEIVHCIESAAAENSKAIVFPELALTSYTCGDLFTHNT 60 Query: 62 FIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYS 121 I + I+ L + + + VG P + +LN ++ G I+ + K +PNYS Sbjct: 61 LISQALTYIEKLIEASKNKDILVAVGSPFLYKSRLLNCCFVIFEGKILGIVPKSYIPNYS 120 Query: 122 EFHEKRTFISG----------------YSNDPIVFRDIR--LGILICEDIWKNSNICKHL 163 EF+EKR F G ++F+ G ICED+W +L Sbjct: 121 EFYEKRWFSEGIDLKSKLIDLPFQKNIPLGTDLIFKCGSASFGFEICEDLWVTIPPSSYL 180 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS K R +V Q IY + + +++F G Sbjct: 181 ALGGANIIGNLSASNEIIGKANYRRNLVENQSGRCICSYIYSSSGVHESSTDILFGGHLL 240 Query: 222 CFDGQQQLAFQMKHFSEQNFMTE------------------------WHYDQQLSQWNYM 257 + L + K F N + D + ++Y Sbjct: 241 ISENASLLK-ENKRFQRDNEIISAIIDLDKLNTERLKNISFRDNSKVLDLDFKEINFSYK 299 Query: 258 SDDSA-------STMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 S D ++P N L ++ N K IIG+SGG+D Sbjct: 300 SLDFGTFDRYINPHPFVPGNPKEMKERCTEILNIQAAGLAKRIEHTNLKKAIIGISGGLD 359 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S L + V EN+ TI +P T+ ++ +A K LG + + I Sbjct: 360 STLALLVIVRTFELLNIPMENIITITMPGFGTTDRTYNNAIDLCKGLGTTFREINIVAAA 419 Query: 360 NHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLY 419 FS + + EN+Q+R R ILM L+N +L+ T + SE+++G+ T Sbjct: 420 LQHFSDIGH--DPSIHDVTYENVQARERTQILMDLANKEGGLLIGTGDLSELALGFCTYN 477 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---- 475 GD ++ + KT V L + H + I IL+ S EL P Sbjct: 478 GDHMSMYSVNTSVPKTLVRYLVRYVADHLSNDNIRK----ILLDILDTPVSPELLPKDKD 533 Query: 476 ---HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDE----TVRYVEH 520 Q ++ + PY + D + + + + +Y D+ + Sbjct: 534 GKIAQKTEDIVGPYELHDFFLYYFMRQGAEREKIHFLAKVAFKDKYTDDEITKWLDKFIF 593 Query: 521 LLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 + ++KR P G K+ S D P + Sbjct: 594 RFFTQQFKRSALPDGPKVGTISVSPRGDLRMPSDASY 630 >gi|229825579|ref|ZP_04451648.1| hypothetical protein GCWU000182_00941 [Abiotrophia defectiva ATCC 49176] gi|229790142|gb|EEP26256.1| hypothetical protein GCWU000182_00941 [Abiotrophia defectiva ATCC 49176] Length = 654 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 134/646 (20%), Positives = 243/646 (37%), Gaps = 101/646 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A + V D N + + +G+ + +F EL I+GY +L ++ + Sbjct: 6 VKVAAVTPDIRVADCVFNGDSIIKEMKYCADRGVKIAVFPELAITGYTCGELFLQERLLS 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + + + VG P + + N + G ++ + K +PNYSE + Sbjct: 66 SALNTLKKIIKASWGMDMLTFVGLPFETDGKLYNVAAVFKDGELLGMVPKQYIPNYSELY 125 Query: 125 EKRTFIS---------------GYS--NDPIVF-----RDIRLGILICEDIWKNSNICKH 162 E R F GY+ + ++F +++++ ICED+W + Sbjct: 126 EARHFTPCVGENRLLDWEENKSGYTYFGNKLIFENKDIKNLKIAAEICEDLWVVIPPSNY 185 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA + +L+ASP K + R +V GQ + ++ IY G+ +L+F G + Sbjct: 186 HVMAGATIIANLSASPEIMGKQEYRRNLVQGQSARLNAGYIYATTGEGESTTDLVFGGHN 245 Query: 221 FCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM-SDDSASTMYIPLQEE------E 273 + + + + F +TE ++ + M + + A + Sbjct: 246 LICE-DGIILAEKQRFKNGTIITEIDVNKLTYERRKMNTCEIAGWENYDFIDFSFEKIFM 304 Query: 274 ADYNA----------------------------------------CVLSLRDYVQKNNFH 293 DYNA L L+ + Sbjct: 305 TDYNADGIKEKMLIETHLERKFPKSPFVPENKEERDSNSEDVITIQSLGLKKRMAHVGCK 364 Query: 294 KVIIGLSGGIDSALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 V+IGLSGG+DS L +A + +ENV + +P T+ ++ +A AK LG Sbjct: 365 YVVIGLSGGLDSTLAVLVACRTMDMLEISRENVIAVTMPCFGTTGRTHNNAVKLAKELGI 424 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I + V + E I EN Q+R R +LM L+N +++ T + Sbjct: 425 TLREINIKESVLTHLRDIGH--DENDHNITFENAQARERTQVLMDLANEYGGLVIGTGDM 482 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE+++G+ T GD + + KT V QL + G L +V I+E Sbjct: 483 SELALGFATYNGDHMSMYGVNASIPKTLVRQLVRYCAEKADEEGKEVLAQV-LVDIVETP 541 Query: 469 PSAELRPH-------QTDQESLPPYPILDDIIKRIVENEE--------SFINNDQEYNDE 513 S EL P Q ++ + PY + D + +V + + EY++E Sbjct: 542 VSPELLPTNEAGELVQKTEDIVGPYELNDFFLYNMVRWGMEPDKLFRLARTAFEDEYSNE 601 Query: 514 TVRYV----EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + + +YKR P G K+ + + D P Sbjct: 602 EIEKWQKSFYRRFFAQQYKRSCLPDGPKVGSVTLSPRGDFRMPSDA 647 >gi|160943885|ref|ZP_02091115.1| hypothetical protein FAEPRAM212_01385 [Faecalibacterium prausnitzii M21/2] gi|158444561|gb|EDP21565.1| hypothetical protein FAEPRAM212_01385 [Faecalibacterium prausnitzii M21/2] Length = 642 Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 131/626 (20%), Positives = 233/626 (37%), Gaps = 83/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK A V D N + + A ++G+ L +F E ++GY DL +++ Q Sbjct: 6 LKAAAFSPALRVADCTYNAQQVLAQLQAAAQRGVKLAVFPEFCLTGYTCGDLFLQRTLQQ 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A++ L + T ++VG P + N +L G ++ + K LPNY EF+ Sbjct: 66 GALDALEWLLAQTRALDTVVLVGLPLLVHGKLYNCAAVLCRGQLLGIVPKTYLPNYGEFY 125 Query: 125 EKRTFISGYS--------------NDPIVFRD-----IRLGILICEDIWKNSNICKHLKK 165 EKR F G + ++FR LG+ +CED+W Sbjct: 126 EKRQFTPGSTEVQTVTVCGQQVPFGTSLLFRCRQMPSFVLGVELCEDLWSALPPSTFHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R +V Q + + +Y + G+ +++F G Sbjct: 186 AGATVIANLSASDETVGKAEYRRALVANQSARLLCGYLYASAGHGESTTDMVFAGHDLIA 245 Query: 224 DGQQQL-----------------------AFQMKHFS---EQNFMTEWHYDQQLSQWNYM 257 + L + F E E+ + + Sbjct: 246 EDGSILAETAPFAGDHAETELDCQRMEAERARNTSFEHTAEGYITVEFDLTPEETVLTRR 305 Query: 258 SDDSASTMYIPLQEEEADYNACVL---SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD 314 D + P + + L ++ + +IG+SGG+DS L +AV Sbjct: 306 IDPAPFVPGDPQRRAARCELILKMQADGLAKRLEHAHAKTAVIGISGGLDSCLALLVAVR 365 Query: 315 ALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQF 369 A+ +V + +P T+ ++ +A LG + + I D V F+ + Q Sbjct: 366 AMKQLHRSAADVLAVTMPCFGTTKRTRSNAEILCGELGVSFQEIRIADTVRSHFADIGQ- 424 Query: 370 LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPL 429 E + EN Q+R+R LM L+N + +++ T + SE+++G+ T GD + Sbjct: 425 -DETVLDVTFENGQARVRTLELMDLANRTGGLVVGTGDLSELALGWATYNGDHMSMYGVN 483 Query: 430 KDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESL 483 + KT V L + T+ L + IL S EL P Q ++ + Sbjct: 484 AGVPKTLVRYLVQYEAETAATAALHD----VLLDILATPVSPELLPAKDGEIAQITEDLV 539 Query: 484 PPYPILDDIIKRIV----------ENEESFINNDQEYND----ETVRYVEHLLYGSEYKR 529 PY + D + ++ + EY D + +R + ++KR Sbjct: 540 GPYELHDFYLYYVLRCGFGPAKIYRLAKVAFAGRAEYTDAVLYKWLRNFYWRFFAQQFKR 599 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 600 SCLPDGPKVGSVTLSPRGDWRMPSDA 625 >gi|332886264|gb|EGK06508.1| hypothetical protein HMPREF9456_00382 [Dysgonomonas mossii DSM 22836] Length = 662 Score = 448 bits (1153), Expect = e-123, Method: Composition-based stats. Identities = 126/649 (19%), Positives = 235/649 (36%), Gaps = 107/649 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D N + + +A + I+F EL I+ Y DL + ++ Sbjct: 7 VRVAAASPALKVADCDYNTDEIIKLINKAEGDNISAIVFPELSITAYTCGDLFLQSLLLE 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +++ + T + +VG P + N V++ G ++ K LPNY+EF+ Sbjct: 67 EALKSLNRICDATRNLSIVALVGLPIAVSNRLYNMAVVVSGGRVMGAVPKTFLPNYNEFY 126 Query: 125 EKRTFISGYS-----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EKR F S + I +CED+W G Sbjct: 127 EKRWFSSSEELKEKTITLCNRSVPVGVDLVFKTELFNFSIDVCEDLWTPIPPSSISCLNG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 AE +F+L+AS K R +V+ Q + +Y G+ ++IF G+S + Sbjct: 187 AEVIFNLSASNETTGKHLYRKSLVSQQSARCISGYVYAASGNGESTTDIIFAGSSMIAEN 246 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS------------------------ 261 + + + FS + +T D + + + + S Sbjct: 247 -GSILAEGERFSFDSKVTVADIDIDRLRIDRLKNKSFSLSEYAAIKGIEFRDVFVSKNLI 305 Query: 262 -------------------------ASTMYIPLQE------EEADYNACVLSLRDYVQKN 290 + T ++P + E ++ V L + Sbjct: 306 SKSISDKLGKDKKANIKKYGLRRFVSPTPFVPTNDGTLNERCEEIFSIQVSGLAKRMLHT 365 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKA 345 K +IG+SGG+DS L + +EN+ I +P T+ ++ +A ++ Sbjct: 366 KIQKAVIGVSGGLDSTLALLVLAKTFDRLNIPRENIIGITMPGFGTTDRTYTNAIKLMQS 425 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 LG + I D V F + + I EN Q+R R ILM +N +++ T Sbjct: 426 LGTTIKEISIKDAVIQHFKDIEHDVNT--HDITYENSQARERTQILMDYANKVNGLVIGT 483 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 + SE+++G+ T GD + + KT V L W + +++ + ++ Sbjct: 484 GDLSELALGWCTYNGDHMSMYAVNTGIPKTLVRTLVGWIADTH----MDEVSKAVLLDVM 539 Query: 466 EKSPSAELRPH-------QTDQESLPPYPILDDIIKRIVE-----------NEESFINN- 506 + S EL P Q ++ + PY + D + ++ + +F Sbjct: 540 DTPVSPELLPMDENGEILQKTEDVVGPYILHDFFLYYVLRFGFPPSKIYFLAKHAFAEQY 599 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 E + +R + ++KR P G K+ + + D P Sbjct: 600 TTEEILKWLRTFFWRFFSQQFKRSCLPDGPKVGSVNLSPRGDWRMPSDA 648 >gi|302334987|ref|YP_003800194.1| NAD+ synthetase [Olsenella uli DSM 7084] gi|301318827|gb|ADK67314.1| NAD+ synthetase [Olsenella uli DSM 7084] Length = 648 Score = 448 bits (1153), Expect = e-123, Method: Composition-based stats. Identities = 127/636 (19%), Positives = 233/636 (36%), Gaps = 94/636 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +K+A V D+ N+ +A G L++ EL ++GY EDL ++ + Sbjct: 6 VKVAARSPKVSVADVHANVDACVAEAADAVRSDGAKLVVLPELCVTGYTCEDLFWQDELL 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + TL T A ++VG P + + + N L G ++ + K N+PNY+EF Sbjct: 66 DAAERGLRTLAERTTVLDALVLVGIPARVNDKLYNCAAALAHGELLGLVPKRNIPNYNEF 125 Query: 124 HEKRTFISGYSNDP-IVFRDI-------------------RLGILICEDIWKNSNICKHL 163 +E R F +G ++ + F D ++ + +CED+W S Sbjct: 126 YEARHFAAGPTDVSHVRFADWENIPFGTSQLFACSTLLQLKVAVEVCEDLWVASPPSIAH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 + GA + +L+AS K R E+V GQ + + +Y + G+ +L+F Sbjct: 186 AQAGATVICNLSASNAVVGKADYRRELVVGQSARLVSAYVYASAGWGESTQDLVFSAHDL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA------------------- 262 + L Q F E TE ++ +S Sbjct: 246 IAEN-GVLLAQASPFGEAAVTTEIDVASLSAERRRLSTFGCTPTAQDAGYEVTTFSLATA 304 Query: 263 ---------STMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 ++P E + L + ++G+SGG+DS L Sbjct: 305 DTRLTRRVDPHPFVPANPARRAERCEDVLSIQSHGLAKRLSHTRSDCAVVGVSGGLDSTL 364 Query: 308 CAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + A + + + +P T+ ++ +A A LG + I V Sbjct: 365 ALLVCARAFDILGLDRSGILAVTMPGFGTTDRTHGNATVLADTLGATLREVDITTAVLQH 424 Query: 363 FSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDM 422 FS + E + EN Q+R R +LM ++N +++ T + SE+++G+ T D Sbjct: 425 FSDIGH--DESDHSVTYENAQARERMQVLMDMANQEGGLVVGTGDLSELALGWATYNADH 482 Query: 423 SGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------ 476 + + KT V L + + GL + +L+ S EL P Sbjct: 483 MSMYGVNAGIPKTLVRHLVRYVADITASDGLSR----VLLDVLDTPVSPELLPATAHGTI 538 Query: 477 -QTDQESLPPYPILDDIIKRIVENEESF------------INNDQEYND----ETVRYVE 519 Q ++ + PY + D + +++ + Y+D + +R Sbjct: 539 SQRTEDLVGPYELHDFFLYQVLRRGFAPRKVYRLARYALGEGTAAGYDDATILKWLRTFY 598 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + + D P Sbjct: 599 RRFFSQQFKRSCLPDGPKVGSVAVSPRGDLRMPSDA 634 >gi|261416210|ref|YP_003249893.1| NAD+ synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372666|gb|ACX75411.1| NAD+ synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326885|gb|ADL26086.1| NAD+ synthetase, glutamine-dependent [Fibrobacter succinogenes subsp. succinogenes S85] Length = 664 Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats. Identities = 135/662 (20%), Positives = 237/662 (35%), Gaps = 110/662 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 + A V D A N + ++ +EA G ++F EL I+GY DL ++ +Q Sbjct: 6 RFASVSPVLKVADTAYNTEEIIKSAKEAASNGAAFVVFPELCITGYTCSDLFHQELLLQN 65 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ + D + VG P + + N L G +IAV KI+LPN EF+E Sbjct: 66 SFNALLKIAGAFADSDVVLAVGLPLRMFGRLYNCAAFLQHGKLIAVTPKIHLPNQREFYE 125 Query: 126 KRTFISG---------------------------------------YSNDPIVFRDIRLG 146 KR F SG + ++R+G Sbjct: 126 KRHFSSGRDLLRGAVGGSVGAIRCYFDGVGEVPVTNYFTVKCGALGQNGSECAGSEVRVG 185 Query: 147 ILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVN 206 + +CED+W L GA + +L+AS K R +V Q + +Y + Sbjct: 186 VELCEDLWTPVPPSGELALAGANVIVNLSASDALVGKRDYRRNLVLNQSARCMAAYVYAS 245 Query: 207 QVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS--- 261 + +++F G + L + K FS + + D + +S+ S Sbjct: 246 AGVHESTTDMVFSGHLMIAEN-GSLIAESKPFSRETEIVYADVDVERLNMQRLSEGSFQD 304 Query: 262 ---------------------------ASTMYIP------LQEEEADYNACVLSLRDYVQ 288 + ++P Q +N L ++ Sbjct: 305 FDSREIVARAASFDGLRAVEKLQYRFVSPMPFVPGSLESRDQSCTEIFNIQCAGLAKRLE 364 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACA 343 + + +IGLSGG+DS L + + + ++ +P T+ ++ +A A Sbjct: 365 ASRSKRAVIGLSGGLDSTLALLVVAETFKLLKRPALEILSLTMPGFGTTKRTKNNAVLLA 424 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 + LG + + I D F + Q+ + EN+Q+R R ILM ++N +++ Sbjct: 425 ELLGVELRTVSIKDACLQHFKDIGHDPQKL--DVTYENVQARERTQILMDVANGEGGIVI 482 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEV---- 459 T + SEI++G+ T D + D+ KT V + W + + T + Sbjct: 483 GTGDLSEIALGWSTYNADHMSMYAVNCDIPKTLVRHIVHWYADNSLKFSADAKTAMELKK 542 Query: 460 IPPSILEKSPSAELRP-------HQTDQESLPPYPILDDIIKRIVENE--------ESFI 504 + IL+ S EL P Q + L Y I D + + + Sbjct: 543 VLYDILDTPVSPELLPADDNGQIAQKTESILGAYEIHDFFLYHFAKYGATPQKLLFLAKY 602 Query: 505 NNDQEYNDETVRY----VEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDH 558 ++ DE + + ++KR P G K+ S D P F D Sbjct: 603 AFAGKFTDEEIEKALTVFVRRFFTQQFKRSCIPDGPKVGTISLSPRADWRMPSDASFADW 662 Query: 559 IS 560 + Sbjct: 663 LK 664 >gi|325970640|ref|YP_004246831.1| NAD+ synthetase [Spirochaeta sp. Buddy] gi|324025878|gb|ADY12637.1| NAD+ synthetase [Spirochaeta sp. Buddy] Length = 635 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 132/628 (21%), Positives = 235/628 (37%), Gaps = 85/628 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A+A + D N + +A ++ + L++ EL S Y DL +K+ + Sbjct: 6 IKCAVASARVKIADCHFNTQSVIQLMHQAQQKQVRLLVLPELVTSAYTCADLFLQKTLQE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C AI+ + +++ +V G + + N V++ +G I+ + K +LPNY EF+ Sbjct: 66 GCLEAIEAIVNESKKLDVLLVFGSLLVVEGNLYNCAVVVHSGVILGIVPKQHLPNYQEFY 125 Query: 125 EKRTF-ISGYSNDPIVF------------------RDIRLGILICEDIWKNSNICKHLKK 165 EKR F +N I R+ L ICED+W ++ Sbjct: 126 EKRWFCTPEDANREITLLGQSTWFGTRLLFQNKEIREFILACEICEDLWVPNSPSIGHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K + R ++ Q + + +Y + G+ +L+F + + Sbjct: 186 AGATVITNCSASDELVGKEEYRRNLIAMQSAKLVCAYVYSDAGQGESSTDLVFTPHNLIY 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNAC---- 279 + L S+ TE + + M AC Sbjct: 246 ENGLPL-ASAFGISDTLVSTEIDVQKLALERIRMQTFKPDRKAYQTISFSWKVAACDLTR 304 Query: 280 --------------------------VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 L L+ +++ + V++GLSGG+DS L + V Sbjct: 305 PIDKAPFVPSDEANRSERCEKILMLQALGLKQRLEQTHIQSVVVGLSGGLDSTLALLVCV 364 Query: 314 DALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A + N+ + +P T+ ++ +A A ALG + I V F + Sbjct: 365 RAFDLLGLDRSNITAVTMPGFGTTKRTKGNAVKLANALGVALRTISIAKAVGQHFKDIGH 424 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + EN Q+R R +LM L+N A+++ T + SE+++G+ T GD + Sbjct: 425 --DSAVLDVTYENSQARERTQVLMDLANKLNALVVGTGDLSELALGWATYNGDHMSMYGV 482 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QTDQE 481 + KT V L S + L +V+ S EL P Q ++ Sbjct: 483 NASVPKTLVRHLVKHVASKSEQTLKKVLLDVV-----ATPVSPELLPANSDGTIKQVTED 537 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDE----TVRYVEHLLYGSEYKR 529 + PY + D + +IV + I +EY D ++ + ++KR Sbjct: 538 IVGPYELHDFFLYQIVRWGFGPSKVYRLACIAFAEEYEDSFILVWLKTFYRRFFNQQFKR 597 Query: 530 RQAPVGTKITAKSFGR--DRLYPISNKF 555 P G KI + S D P + Sbjct: 598 SCMPDGPKIGSLSLSPRGDWRMPSDASY 625 >gi|95930747|ref|ZP_01313480.1| NAD+ synthetase [Desulfuromonas acetoxidans DSM 684] gi|95133227|gb|EAT14893.1| NAD+ synthetase [Desulfuromonas acetoxidans DSM 684] Length = 651 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 136/631 (21%), Positives = 241/631 (38%), Gaps = 88/631 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++A+A + + D+ N + A A +QG ++F EL ++GY DL F+ ++ Sbjct: 12 FRLAVASVEHRIADLEFNAEQITSAALRAKKQGCHCVVFPELSLTGYGCGDLFFQSILLE 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + LK T ++VG P + N V++ G I+ V K LPN EF+ Sbjct: 72 RTRQVLGDLKKMTRHEQMILIVGAPIAQGGRLFNCAVVISGGEILGVVPKNFLPNTQEFY 131 Query: 125 EKRTFISGYS---------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 E+R F + D ++FR LG+ ICED W + + Sbjct: 132 EERWFSAAADRTADEISLCGAMVPFGDDLLFRQKELPGCVLGVEICEDGWVANPPSGQMA 191 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+ASP K R ++V Q + Y + G+ +L+F G S Sbjct: 192 VAGATVLVNLSASPEILGKQDYRRQLVQSQSARCLAAYAYASAGPGESSTDLVFSGHSLI 251 Query: 223 FDGQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWN------------------YMSDDSAS 263 + Q LA + F+ Q + + D+ ++ + + + A Sbjct: 252 AENGQLLAETERFSFATQLAIGDVDIDRLYNERHKNNSFAASSAQNAYRKIEFNCAEHAH 311 Query: 264 TMYIPLQEEEADYNA---------------CVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 T A +L + V+IG+SGG+DS L Sbjct: 312 TPLHRPLPCHPFVPANLNERDQRCEEIFALQTTALAKRLNHIGVRNVVIGISGGLDSTLA 371 Query: 309 AAIAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + V A K + + + +P T+ ++ +A + LG + ++ I V F Sbjct: 372 LLVTVKAFEKLDLDPQGITAVTMPGFGTTTRTRGNAESLIDLLGAQCRIISIDAAVRQHF 431 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 + + E I EN Q+R R +LM ++N +++ T + SE+++G+ T D Sbjct: 432 ADIGH--DESVHNITYENSQARERTQLLMDIANQVGGIVIGTGDLSELALGWCTYNADHM 489 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------H 476 + + KT V L SW T + I S EL P Sbjct: 490 SMYGVNCGVPKTLVRYLVSWCAQASFCG----ETRRVLEDICATPVSPELLPPDEAGEIS 545 Query: 477 QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEHL----LYG 524 Q ++ + PY + D + ++V ++ + + Y+D T+ + + Sbjct: 546 QVTEDHVGPYELHDFYLFQVVRHQFAPRKVFFLARQAFAERYDDATLLKWLQVFFRRFFS 605 Query: 525 SEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + + D P Sbjct: 606 QQFKRSCLPDGPKVGSVALSPRGDWRMPSDA 636 >gi|255505933|ref|ZP_05348950.3| glutamine-dependent NAD+ synthetase [Bryantella formatexigens DSM 14469] gi|255265057|gb|EET58262.1| glutamine-dependent NAD+ synthetase [Bryantella formatexigens DSM 14469] Length = 641 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 133/626 (21%), Positives = 238/626 (38%), Gaps = 84/626 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A V D N A+ A +EA G +I+F EL I+GY DL +++ + Sbjct: 6 VKVAAVTPELKVADCIYNTAQICEAAKEAADAGAKIIVFPELGITGYTCCDLFWQERLLV 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + + A + VG P + ++ + N + G ++ + K LPNY+EF+ Sbjct: 66 SAKEGLRKIVDASRMWDALVFVGLPWEKEQKLYNVAAAVSRGRLLGLVPKRFLPNYAEFY 125 Query: 125 EKRTFISGY--------SNDPIVF-----------RDIRLGILICEDIWKNSNICKHLKK 165 E R F G P+ F + + ICED+W Sbjct: 126 EARHFTPGDANISWTEFEGSPVPFGQNLLFVCREMEGLTVAAEICEDLWAPDPPSTRHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K R +V Q + + +Y + G+ +L+F G + Sbjct: 186 AGATVLVNLSASDENTGKSIYREALVANQSARLICGYLYASAGEGESTTDLVFGGHNLIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM-------------------------S 258 + + Q F+ +E + S+ M + Sbjct: 246 EN-GTVLAQSPRFTNGIIYSELDIHRLRSERRRMTTFQCAENTEYEKIPFHLETEETVLT 304 Query: 259 DDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA---LCA 309 D ++P + E L L+ + ++IG+SGG+DS L A Sbjct: 305 RDFTPMPFVPADRGDRDRRCEEILIIQALGLKKRLLHTGCKSMVIGISGGLDSTLALLVA 364 Query: 310 AIAVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A A D +G E + ++ +P T+ ++ +A + LG + I + V F + Sbjct: 365 AKAADMIGLERSAILSVTMPCFGTTDRTYRNACELTEKLGATLREVNIRNAVQVHFRDIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + + EN Q+R R ILM L+N S +++ T + SE+++G+ T GD + Sbjct: 425 H--DPDEHDVTYENSQARERTQILMDLANKSGGLVIGTGDLSELALGWATYNGDHMSMYA 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + L + +L+ S EL P Q ++ Sbjct: 483 VNASVPKTLVRHLVRYYADTCGDEALAG----VLQDVLDTPVSPELLPPKDGVISQRTED 538 Query: 482 SLPPYPILDDIIKRIVENEE--------SFINNDQEYNDETV----RYVEHLLYGSEYKR 529 + PY + D + ++ E + Y+ ET+ + + ++KR Sbjct: 539 LVGPYELHDFFLYHMLRCGEEPSKVYRLAERAFAGTYDRETILKWLKTFYRRFFAQQFKR 598 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 599 SCLPDGPKVGSVAVSPRGDLRMPSDA 624 >gi|315652178|ref|ZP_07905175.1| NAD synthetase [Eubacterium saburreum DSM 3986] gi|315485573|gb|EFU75958.1| NAD synthetase [Eubacterium saburreum DSM 3986] Length = 636 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 119/625 (19%), Positives = 228/625 (36%), Gaps = 82/625 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + V D+A N ++A E +I+F EL ++GY DL F+ I Sbjct: 6 VRVASVTPDIKVCDVAYNKENIKKAIEIEWENKSKIIVFPELCLTGYTCNDLFFQDILIC 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + + I +G P + + N + G ++ +K++LPNY EF+ Sbjct: 66 EAKKALKEIVEFSAGHKSIIFIGLPLDFKGKLYNVAAAISDGALLGFINKLHLPNYGEFY 125 Query: 125 EKRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 E+R F G+ + + F + + ICED+W + Sbjct: 126 EERYFNRGFEAPVWVDFFDMTVPMGANILFECLNFPGLTIAGEICEDLWVPNPPSVGHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +AS K R +++ + IY N G+ +L+F G Sbjct: 186 AGANVCINASASNDIVGKKAYRDALISNHSKKLICSYIYANAGEGESTQDLVFGGQGIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFM-----------------------------TEWHYDQQLSQW 254 + + LA +E + E ++ + Sbjct: 246 ENGKILAKSTGFKNEAVRIEIDINRLNLERRKQTTFKTVDDEGYFKAEFELDIEELNLKR 305 Query: 255 NYMSDDSASTMYIPLQEEEADY-NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 N+ + E + L L+ + V++G+SGG+DS L + V Sbjct: 306 NFNPKPFVPNDTLKRNERCDEILTIQALGLKKRLVHTGIKNVVLGISGGLDSTLALLVCV 365 Query: 314 DALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 N ++ + +P T+ ++ ++A K+ + + I + + F + Sbjct: 366 KTFEMLNLDKSGIKAVTMPGFGTTDRTYKNACELTKSFAASLEEISIVESIKRHFIDIKH 425 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + + EN Q+R R ILM ++N +++ T + SE+ +G+ T GD + Sbjct: 426 DIN--VKDVTYENAQARERTQILMDIANRDNGLVVGTGDLSELVLGWATYNGDHMSMYGV 483 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQES 482 + KT V L ++ + I IL+ S EL P Q ++ Sbjct: 484 NASVPKTLVRHLVNYYADTVGDKKIAN----ILYDILDTPVSPELLPAEDGKIVQKTEDL 539 Query: 483 LPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV----EHLLYGSEYKRR 530 + PY + D + ++ + D Y+ +TV + ++KR Sbjct: 540 VGPYELHDFFLYNVLRFGFMPSKVYRMAKSAFDTVYDADTVLKWLKVFYKRFFAQQFKRS 599 Query: 531 QAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 600 ALPDGPKVGSIAVSPRGDLRMPSDA 624 >gi|16127849|ref|NP_422413.1| NAD synthetase [Caulobacter crescentus CB15] gi|221236670|ref|YP_002519107.1| NAD synthetase [Caulobacter crescentus NA1000] gi|13425369|gb|AAK25581.1| NAD(+) synthetase, putative [Caulobacter crescentus CB15] gi|220965843|gb|ACL97199.1| glutamine-dependent NAD(+) synthetase [Caulobacter crescentus NA1000] Length = 678 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 146/653 (22%), Positives = 244/653 (37%), Gaps = 108/653 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + D A N EA+ +G+ +++F EL ++GY +DL+ +++ + Sbjct: 15 VRVATAVPKVKLADPAANAQNVVALAREAHAEGVAVVVFPELGLTGYTIDDLLQQEALLD 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +AI TL + IVVG P +D + N+ +++ G ++ V K LPNY EF+ Sbjct: 75 AVEAAIATLTEASAGLAPMIVVGGPLRDAGRLYNTAIVIQGGKVLGVVPKSFLPNYREFY 134 Query: 125 EKRTFISGYS---------------NDPIVFRD-----IRLGILICEDIWKNSNICKHLK 164 E+R F G I+FR +G+ ICED+W + Sbjct: 135 ERRWFTPGAGLTGKTLTLAGQTVPFGTDILFRGEGVAPFTVGVEICEDVWTPTPPSTAQA 194 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GAE L +L+AS K + R + Q S + +Y G+ +L +DG Sbjct: 195 LAGAEILLNLSASNITIGKSETRRLLCASQSSRMIAAYVYSAAGAGESSTDLAWDGHVDI 254 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM-----------SDDSASTMYIPL-- 269 + L + FS T D Q + M S S +P Sbjct: 255 HEM-GALLAETPRFSTGPAWTFADVDVQRLRQERMRVGSFGDAMALSPASTPFRIVPFAF 313 Query: 270 ---------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + YN V L ++ + K++IG+SGG Sbjct: 314 DAPEGDLALARPIERFPFTPSDPARLRENCYEAYNIQVQGLARRLEASGLKKLVIGISGG 373 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ + N+ LP TS ++ +A A KA+ L I Sbjct: 374 LDSTQALLVAAKAMDQLGLPRSNILAYTLPGFATSDRTKSNAWALMKAMAVTAAELDIRP 433 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + E + EN+Q+ +R + L L+NH+ A+++ T + SE+++G+ Sbjct: 434 AATQMLKDLDHPFGRGEAVYDVTFENVQAGLRTDYLFRLANHNAALVVGTGDLSELALGW 493 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +NP KT + L + G G T + IL S EL Sbjct: 494 CTYGVGDHMSHYNPNCGAPKTLIQHLIRFVAHSGDV---GAETTALLDDILATEISPELV 550 Query: 475 PH---QTDQESLPPYPILDDIIKRIVENEESFINND------------------------ 507 P Q + + PY + D + + + Sbjct: 551 PGEAVQATESFVGPYALQDFNLYYMTRYGMAPSKIAFLAWSAWHDADQGGWPVGLPDNAR 610 Query: 508 QEYN----DETVRYVEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISN 553 + Y+ + + +++KR P G KI+ A S D P Sbjct: 611 RAYDLPEIKRWLELFLKRFFANQFKRSAVPNGPKISSGGALSPRGDWRMPSDA 663 >gi|330837296|ref|YP_004411937.1| NAD+ synthetase [Spirochaeta coccoides DSM 17374] gi|329749199|gb|AEC02555.1| NAD+ synthetase [Spirochaeta coccoides DSM 17374] Length = 637 Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 134/635 (21%), Positives = 245/635 (38%), Gaps = 88/635 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + +A V D N + +A + A+ QG+ L++F EL ++GY DL + + + Sbjct: 6 ISVAAVSPAVKVADCTWNTRRIIQAMDAASSQGISLLVFPELSVTGYTCGDLFLQDALLA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A ++ + S + VVG P + + N V++ G+I+ V K N+PNY EF+ Sbjct: 66 AVQESLAAIVSHSTGIDTVAVVGAPLVWRNKLYNCAVVIHHGHILGVVPKTNIPNYQEFY 125 Query: 125 EKRTFISGYSN-------------------DPIVFRDIRLGILICEDIWKNSNICKHLKK 165 E R F D + ICED+W Sbjct: 126 ELRWFAPAPDGIDTLVLAGQEVPFGTRLLFSCTSVTDFIFAVEICEDLWVPMPPSASHAM 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R +V Q + + IY + G+ +L+F G Sbjct: 186 AGATVMVNLSASDEVVGKDGYRRNLVASQSARLACAYIYCDAGYGESTTDLVFTGHDLVA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + + + + ++Q TE + +S Sbjct: 246 EN-GHIVAEHEGKADQLLRTEVDVAFLARERRLLSTFPQTSGDYRTIFFSQKIGETVLTR 304 Query: 262 --ASTMYIP-LQEEEADYNACVL-----SLRDYVQKNNFHKVIIGLSGGIDSALCAAI-- 311 A ++P + + A +L L ++ +++GLSGG+DS L + Sbjct: 305 TVARYPFVPADSADLKERCAKILSLQAQGLAKRLEHTRSTGLVLGLSGGLDSTLALLVSI 364 Query: 312 -AVDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 AVDALG ++N+ I +P T+ ++ +A AKA+G + + I V F + Q Sbjct: 365 RAVDALGMSRKNILAISMPGFGTTKRTKGNATQLAKAMGVSFQSISIAAAVRRHFIDIGQ 424 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + + EN Q+R R ILM ++N + +++ T + SE+++G+ T GD + Sbjct: 425 --DCDIHDVTYENSQARERTQILMDVANKNNMLVVGTGDLSELALGWATYNGDHMSMYGV 482 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH-------QTDQE 481 + KT V L + + LG + +L+ S EL P Q ++ Sbjct: 483 NASIPKTLVRHLVRYVADESDET-LGK----VLLDVLDTPVSPELLPADSQGKISQVTED 537 Query: 482 SLPPYPILDDIIKRIVEN--------EESFINNDQEYND----ETVRYVEHLLYGSEYKR 529 + PY + D + ++ + ++ Y+ + + ++KR Sbjct: 538 IVGPYELHDFFLYAMMRKGFSPSKVFRLACRAFEETYDRTTILSWLTVFYRRFFSQQFKR 597 Query: 530 RQAPVGTKITAKSFGR--DRLYPISNK---FRDHI 559 P G K+ + D P + + D + Sbjct: 598 SVLPDGPKVGTVTLSPRGDWRMPSDAQATIWLDEL 632 >gi|229828136|ref|ZP_04454205.1| hypothetical protein GCWU000342_00193 [Shuttleworthia satelles DSM 14600] gi|229792730|gb|EEP28844.1| hypothetical protein GCWU000342_00193 [Shuttleworthia satelles DSM 14600] Length = 637 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 122/628 (19%), Positives = 235/628 (37%), Gaps = 88/628 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A + V N + E G +++F EL I+ Y DL +++ I Sbjct: 6 VKVAAASPDLKVAACHYNADRILDQIAELALAGAKIMVFPELAITSYTASDLFLQEALID 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + T A I +G P + + + N +L+ GN++ + K +LPNY+EF+ Sbjct: 66 QAKEELGRIAKATEGVDALIFIGLPWEHKCKLYNVAAVLNRGNLLGLVPKKHLPNYNEFY 125 Query: 125 EKRTFISGYSNDPIVFRDIR---------------------LGILICEDIWKNSNICKHL 163 E R F + D I D + + ICED+W + Sbjct: 126 ELRHFTP--AADEIDLTDWQEDQVPFGTNLLFACRELPHLIVSAEICEDLWVPAPPSTSH 183 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 + GA L +L+AS K R +++ + IY + G+ +L+F Sbjct: 184 AEAGATVLVNLSASDEMTGKAAYRRQLLMAHSASTVSAYIYASSGDGESTQDLVFGSHKL 243 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWN----YMSDDSASTMYIPL-------- 269 + + + F ++E ++ ++ Y + D + +P Sbjct: 244 IVEN-GSILAESPRFVNGTLLSEIDVNRLAAERRRISTYPAADRDDYLTLPFSLDLTKTG 302 Query: 270 -------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAA 310 + E + L+ + +IG+SGG+DS L Sbjct: 303 LTRTFPSAPFVPSDKNLRAKRCEEILTIQAMGLKKRLLHTRAKSAVIGISGGLDSTLALL 362 Query: 311 IAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSL 365 + V A +EN+ + +P T+ ++ +A + L + I V+ F+ Sbjct: 363 VTVKAFDLAGLNRENIICVTMPGFGTTDRTYTNACQLTRLLKAALKEVDIKASVSQHFAD 422 Query: 366 MSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGG 425 + + + EN Q+R R ILM ++N + +++ T + SE+++G+ T GD Sbjct: 423 IGHDI--RVHDVTYENSQARERTQILMDIANQTGGLVIGTGDLSELALGWATYNGDHMSM 480 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTD 479 + + KT V L ++ + L I IL+ S EL P Q Sbjct: 481 YGVNASIPKTLVRYLVAFYADSCGENALAA----ILRDILDTPVSPELLPPREGLISQKT 536 Query: 480 QESLPPYPILDDIIKRIVEN--------EESFINNDQEYND----ETVRYVEHLLYGSEY 527 ++ + PY + D + ++ + I+ Y+ + ++ + ++ Sbjct: 537 EDLVGPYELHDFFLYYMLRAGFPPSKIYRIARISFCDRYDSRTILKWLKTFYRRFFAQQF 596 Query: 528 KRRQAPVGTKITAKSFGR--DRLYPISN 553 KR P G K+ + + D P Sbjct: 597 KRSALPDGPKVGSVALSPRGDLRMPSDA 624 >gi|291526096|emb|CBK91683.1| NAD+ synthetase [Eubacterium rectale DSM 17629] Length = 650 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 131/642 (20%), Positives = 233/642 (36%), Gaps = 102/642 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + +GD N E ++ + L++F EL I+GY D+ +K + Sbjct: 7 RVAASSPEIYLGDCVNNADNIIHIAESLAKKDVQLVVFPELCITGYSCADMFLRKELLAQ 66 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D +K+ D + VG P +D+ + N + +G I+ + K +PNY EF+ Sbjct: 67 AQQELDRIKTALQDLSILVCVGLPIEDEAGRLFNCAAYVHSGEIVGIVPKTYIPNYGEFY 126 Query: 125 EKRTFISGYS-------------------NDPIVFRDIR---LGILICEDIWKNSNICKH 162 EKR F S + I+ +D+R +G ICED+W ++ Sbjct: 127 EKRWFTSADKRLSDEITLNYVANRPTVPFSPNIIIKDLRGAIVGTEICEDLWVSAPPSGE 186 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 L K GA + + +AS K + R +V Q +Y + G+ +L+F G Sbjct: 187 LCKAGANIIINPSASNDVIGKREYRRSLVAMQSGRCRAGYVYASSGAGESSTDLVFSGHC 246 Query: 221 FCFDGQQQL-------AFQMKHFSEQNFMT------EWHYDQQLSQWNYMSDDSA----- 262 D + K SE + M+ E D+ ++ + + DS Sbjct: 247 IIADNGRIAGETSDYSKRMNKKVSEDDVMSSGFVISEIDIDRCMNDRHRYNSDSWADVPD 306 Query: 263 -----------------------STMYIP---LQEEEADYNACVL---SLRDYVQKNNFH 293 ++P + L L + Sbjct: 307 VIKVILNGENRMKDYQIWPKKVNPYPFVPSDKNNRKNRCMEILSLQAKGLEQRLISTGIK 366 Query: 294 KVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 V++G+SGG+DS L + DA K N+ I +P T+ + A + G Sbjct: 367 NVVLGISGGLDSTLALLVCCDAFEALGIPKRNIYGITMPGFGTASTTKTIADRLMEEFGV 426 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I + ++ + ENIQ+R R +L +N +++ T + Sbjct: 427 TAVEVNIEAACRQHMKDIGHP--DDVFDVTYENIQARERTQVLFDYANMVGGLVIGTGDM 484 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE+++G+ T GD + + KT V + ++ + + I + Sbjct: 485 SELALGWCTYNGDHMSNYAVNCSVPKTLVKYIV---QAYASECASKDEMKNVLCEIADLP 541 Query: 469 PSAELRP-------HQTDQESLPPYPILDDIIKRIVENEES-----------FINNDQEY 510 S EL P Q +ES+ Y + D + + N ES F N + Sbjct: 542 ISPELLPPDKDGNIAQKTEESIGKYDLHDFFLYHFLRNGESRDRILKLAEIAFANVSKGE 601 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYP 550 ++T+ ++KR P G K+ S D P Sbjct: 602 IEKTLETFFTRFRQQQFKRSCIPDGPKVGTVSLSPRGDLRMP 643 >gi|331002510|ref|ZP_08326028.1| hypothetical protein HMPREF0491_00890 [Lachnospiraceae oral taxon 107 str. F0167] gi|330410326|gb|EGG89760.1| hypothetical protein HMPREF0491_00890 [Lachnospiraceae oral taxon 107 str. F0167] Length = 638 Score = 442 bits (1136), Expect = e-121, Method: Composition-based stats. Identities = 120/625 (19%), Positives = 233/625 (37%), Gaps = 82/625 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + V D+A N + A ++ +G +I+F EL ++ Y DL F+ + I+ Sbjct: 6 IRVASVSPDIRVCDVAYNKESIKDAIKKEWDEGSSIIVFPELCLTSYTCNDLFFQDTLIK 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + + + I +G P + + N ++ G ++ + +K+NLPNY EF+ Sbjct: 66 EAKHALKEIVEFSSGHKSIIFIGLPWDFKGKLYNVAAVISNGILLGLINKLNLPNYGEFY 125 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R F G+ + V ++ + ICED+W + Sbjct: 126 EARYFNRGFKDPVWVDFFDDVIPMGTNILFECSNVPNLIIAGEICEDLWVPNPPSVEHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L + +AS K+ R +++ + IY N G+ +L+F G Sbjct: 186 AGANVLVNCSASNDIVGKMSYRDNLISNHSKKLISAYIYANAGEGESTQDLVFGGQGIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFM---------------------------TEWHYDQQLSQWNY 256 + + LA + +E + +E+ + ++ Sbjct: 246 ENGKILAKSTRFKNEAVRIEIDVNRLVLERRKQTTFEQGDEDGYFKSEFELEPVELEFKR 305 Query: 257 MSDDSASTMYIPLQEEEADYNAC---VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 D + +E L L+ + VI+G+SGG+DS L + Sbjct: 306 NFDSKPFVPDDMSKRKERCEEILTIQALGLKKRLLHTGAKNVILGISGGLDSTLALLVCA 365 Query: 314 D-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 K ++ + +P T+ ++ +A ++ G + + I + + F ++ Sbjct: 366 KTFDMLGFDKSGIRAVTMPGFGTTDRTYNNACELTESFGATLEEISIVESIKRHFLDINH 425 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 + I EN Q+R R ILM ++N +++ T + SE+ +G+ T GD + Sbjct: 426 DIN--IKNITYENAQARERTQILMDIANRDNGLVVGTGDLSELVLGWATYNGDHMSMYGV 483 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQES 482 + KT V L ++ + I IL+ S EL P Q ++ Sbjct: 484 NASIPKTLVRHLVNYYADTTDDKKIAN----ILYDILDTPVSPELLPPENGKIAQKTEDL 539 Query: 483 LPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVEH----LLYGSEYKRR 530 + PY + D + + + EY E + + ++KR Sbjct: 540 VGPYELHDFFLYNALRFGFIPSKIYRMAKKAFAGEYESEVILKWLKVFYSRFFSQQFKRS 599 Query: 531 QAPVGTKITAKSFGR--DRLYPISN 553 P G K+ + + D P Sbjct: 600 ALPDGPKVGSIAISPRGDLRMPSDA 624 >gi|332299226|ref|YP_004441147.1| NAD+ synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332176289|gb|AEE11979.1| NAD+ synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 647 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 133/634 (20%), Positives = 242/634 (38%), Gaps = 91/634 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + +A G++++ EL I+GY DL + ++ Sbjct: 6 VKVAAAVPYVRVADCYYNTSRIKEMIFQAEELGVEILTTPELSITGYTCGDLFHQSFLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L +T + ++VG P + +E + N V G I+ K LPNY EF Sbjct: 66 QAQKALCQLVEETAETDVMVIVGMPVKVEEKLFNGAVAFQHGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTFIS-----------GYSNDP----IVFRDIR--LGILICEDIWKNSNICKHLKKQG 167 EKR F G P I+F+ + +GI ICED+W L G Sbjct: 126 EKRWFSPSDSLQYKTVQMGPHTVPIGRNIIFKCGQVGIGIEICEDMWTPFTPGTRLSLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K +++G S +Y + G+ +L++ G +F + Sbjct: 186 AHIIFNLSASNENAGKHDYLRSLISGATSQSICGYVYASSGYGESSTDLVYTGKAFIAEV 245 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSASTMYI---------------- 267 ++ +M+ F E+ +++ + + S ++ + Sbjct: 246 -GKIVKEMRRFEYKERMIVSDIDVSRIHGERLINSSFKSAVNHFTDEEELVSIPFTLRSE 304 Query: 268 ---------------------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 P + + V L ++ +IG+SGG+DSA Sbjct: 305 EESQPMDRIIERNPFMPEGANPEERCHEMFQIQVCGLIQRLKHMRAEHAVIGISGGLDSA 364 Query: 307 LCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + +A ++ + + +P TS ++ + + LG + I + Sbjct: 365 LALLVTAEAFDLLGLDRKQIIAVTMPGFGTSERTYRNGYTMMQELGVTIREIDIKEATEQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 S + + EN Q+R R ILM L+N A ++ T + SEI++G+ T GD Sbjct: 425 HLSAID--YKGNREDATFENAQARERTQILMDLANMYHAPVIGTGDLSEIALGWCTFNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V + W +H +G PL I+ S EL P Sbjct: 483 HMSMYAVNSGITKTSVQLIVGWYATH--QAGDTPLATT-LQDIVATPISPELLPIKDTKA 539 Query: 476 --HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HL 521 Q Q+ + PY + D I + + + + + Y + +++ Sbjct: 540 GSEQQTQDLVGPYELHDFFIYHFLLDGFEPKKIFYLAKVAFEGAYTPQEIKHWMGVFFKR 599 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S + P Sbjct: 600 FFSQQFKRNAMPDGPKVQSVSLSSRGEWRMPSDA 633 >gi|313887332|ref|ZP_07821023.1| NAD+ synthase [Porphyromonas asaccharolytica PR426713P-I] gi|312923251|gb|EFR34069.1| NAD+ synthase [Porphyromonas asaccharolytica PR426713P-I] Length = 647 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 133/634 (20%), Positives = 242/634 (38%), Gaps = 91/634 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + +A G++++ EL I+GY DL + ++ Sbjct: 6 VKVAAAVPYVRVADCYYNTSRIKEMIFQAEELGVEILTTPELSITGYTCGDLFHQSFLLE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L +T + ++VG P + +E + N V G I+ K LPNY EF Sbjct: 66 QAQKALCQLVEETAETDVMVIVGMPVKVEEKLFNGAVAFQHGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTFIS-----------GYSNDP----IVFRDIR--LGILICEDIWKNSNICKHLKKQG 167 EKR F G P I+F+ + +GI ICED+W L G Sbjct: 126 EKRWFSPSDSLQYKTVQMGPHTVPIGRNIIFKCGQVGIGIEICEDMWTPFTPGTRLSLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K +++G S +Y + G+ +L++ G +F + Sbjct: 186 AHIIFNLSASNENAGKHDYLRSLISGATSQSICGYVYASSGYGESSTDLVYTGKAFIAEV 245 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSASTMYI---------------- 267 ++ +M+ F E+ +++ + + S ++ + Sbjct: 246 -GKIVKEMRRFEYKERMIVSDIDVSRIHGERLINSSFKSAVNHFTDEEELVSIPFTLRSE 304 Query: 268 ---------------------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 P + + V L ++ +IG+SGG+DSA Sbjct: 305 EESQPMDRVIERNPFMPEGANPEERCHEMFQIQVCGLIQRLKHMRAEHAVIGISGGLDSA 364 Query: 307 LCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + +A ++ + + +P TS ++ + + LG + I + Sbjct: 365 LALLVTAEAFDLLGLDRKQIIAVTMPGFGTSERTYRNGYTMMQELGVTIREIDIKEATEQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 S + + EN Q+R R ILM L+N A ++ T + SEI++G+ T GD Sbjct: 425 HLSAID--YKGNREDATFENAQARERTQILMDLANMYHAPVIGTGDLSEIALGWCTFNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V + W +H +G PL I+ S EL P Sbjct: 483 HMSMYAVNSGITKTSVQLIVGWYATH--QAGDTPLATT-LQDIVATPISPELLPIKDTKA 539 Query: 476 --HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HL 521 Q Q+ + PY + D I + + + + + Y + +++ Sbjct: 540 GSEQQTQDLVGPYELHDFFIYHFLLDGFEPKKIFYLAKVAFEGAYTPQEIKHWMGVFFKR 599 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S + P Sbjct: 600 FFSQQFKRNAMPDGPKVQSVSLSSRGEWRMPSDA 633 >gi|302346564|ref|YP_003814862.1| NAD+ synthase [Prevotella melaninogenica ATCC 25845] gi|302150411|gb|ADK96672.1| NAD+ synthase [Prevotella melaninogenica ATCC 25845] Length = 656 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 142/645 (22%), Positives = 238/645 (36%), Gaps = 103/645 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N+ + + A QG+++I+F EL I+GY +DL ++ + Sbjct: 6 IKVAAAIPAVKVADTKFNLIETEKQIAIAEGQGVEIIVFPELSITGYTCQDLFQQQLLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L T ++VG P +LN +++ G ++ + K LPNYSEF+ Sbjct: 66 DTEQAVIELLEFTRQLDITVIVGAPVAVGALLLNCALVIQQGKLLGIVAKTFLPNYSEFY 125 Query: 125 EKRTFISGYSNDPIVFR-------------------DIRLGILICEDIWKNSNICKHLKK 165 EKR F S P R I ICED+W + HL Sbjct: 126 EKRWFASSQDLRPQHIRFAGNNIRVTPELQIFRTSEGATFAIEICEDVWAPTPPSNHLAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE +F+L+ S K ++ Q + +Y + G+ +++F G + F Sbjct: 186 AGAEIIFNLSTSDELIGKHTYLKSLLAQQSARTISGYVYSSSGFGESTQDVVFGGNALIF 245 Query: 224 DGQQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMS----------------------- 258 + L Q + F Q ++E + S+ S Sbjct: 246 EN-GSLVKQSERFQLDPQLVISEIDIENLRSERRTNSTFVNAQRPVASGLAGVTGQIDEL 304 Query: 259 -------------------DDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHK 294 + +IP E + YN V L + N Sbjct: 305 ALHVDCLPPLKPMREFTLTREFDQHPFIPKTENMQEACDEIYNIQVSGLAKRLVHTNCKS 364 Query: 295 VIIGLSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCK 349 IIG+SGG+DS L + V K + + + +P T+ ++ ++A A + LG Sbjct: 365 AIIGISGGLDSTLALLVVVKTFDKLGLDRKGIVGVTMPGFGTTGRTYKNAMALMERLGIT 424 Query: 350 YDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + I V F + E EN Q+R R ILM LSN +++ T + S Sbjct: 425 IREIDIKASVLQHFKDIGH--APEVHDSTYENAQARERTQILMDLSNQMNGLVIGTGDLS 482 Query: 410 EISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 E+++G+ T GD + + KT L + T +I I+E Sbjct: 483 ELALGWCTYNGDHMSMYAVNAGVPKTLTQYLVRYAADT--TKDENVRKTLI--DIVETPI 538 Query: 470 SAELRP-------HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDET 514 S EL+P Q ++ + PY + D + ++ + Y D Sbjct: 539 SPELKPADDKGEIAQKTEDLVGPYELHDFFLYYVLRCGFRPSKIYWMAQNAFRGVYPDSV 598 Query: 515 VRYVEHL----LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + + + + ++KR P G K+ + S D P Sbjct: 599 ILHWMRIFFRRFFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 643 >gi|238924754|ref|YP_002938270.1| NAD synthetase [Eubacterium rectale ATCC 33656] gi|238876429|gb|ACR76136.1| NAD synthetase [Eubacterium rectale ATCC 33656] gi|291527169|emb|CBK92755.1| NAD+ synthetase [Eubacterium rectale M104/1] Length = 650 Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 132/642 (20%), Positives = 233/642 (36%), Gaps = 102/642 (15%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + +GD N E ++ + L++F EL I+GY D+ +K + Sbjct: 7 RVAASSPEIYLGDCVNNADNIIHIAESLAKKDVQLVVFPELCITGYSCADMFLRKELLAQ 66 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQ-EGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +D +K+ D + VG P +D+ + N + +G I+ + K +PNY EF+ Sbjct: 67 AQQELDRIKTALQDLSILVCVGLPIEDEAGRLFNCAAYVHSGEIVGIVPKTYIPNYGEFY 126 Query: 125 EKRTFISGYS-------------------NDPIVFRDIR---LGILICEDIWKNSNICKH 162 EKR F S + I+ +D+R +G ICED+W ++ Sbjct: 127 EKRWFTSADKRLSDEITLNYVANRPTVPFSPNIIIKDLRGAIVGTEICEDLWVSAPPSGE 186 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 L K GA + + +AS K + R +V Q +Y + G+ +L+F G Sbjct: 187 LCKAGANIIINPSASNDVIGKREYRRSLVAMQSGRCRAGYVYASSGAGESSTDLVFSGHC 246 Query: 221 FCFDGQQQL-------AFQMKHFSEQNFMT------EWHYDQQLSQWNYMSDDSA----- 262 D + K SE + M+ E D+ ++ + + DS Sbjct: 247 IIADNGRIAGETSDYSKRMNKKVSEDDVMSSGFVISEIDIDRCMNDRHRYNSDSWADVPD 306 Query: 263 -----------------------STMYIP---LQEEEADYNACVL---SLRDYVQKNNFH 293 ++P + L L + Sbjct: 307 VIKVILNGENRMKDYQIWPKKVNPYPFVPSDKNNRKNRCMEILSLQAKGLEQRLISTGIK 366 Query: 294 KVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 V++G+SGG+DS L + DA K N+ I +P T+ + A + G Sbjct: 367 NVVLGISGGLDSTLALLVCCDAFEALGIPKRNIYGITMPGFGTTSTTKTIADRLMEEFGV 426 Query: 349 KYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK 408 + I + ++ + ENIQ+R R +L +N +++ T + Sbjct: 427 TAVEVNIEAACRQHMKDIGHP--DDVFDVTYENIQARERTQVLFDYANMVDGLVIGTGDM 484 Query: 409 SEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 SE+++G+ T GD + + KT V + S ++ + I + Sbjct: 485 SELALGWCTYNGDHMSNYAVNCSVPKTLVKYIVQAYASECASTDEMKN---VLCEIADLP 541 Query: 469 PSAELRP-------HQTDQESLPPYPILDDIIKRIVENEES-----------FINNDQEY 510 S EL P Q +ES+ Y + D + + N ES F N + Sbjct: 542 ISPELLPPDKDGNIAQKTEESIGKYDLHDFFLYHFLRNGESRDRILKLAEIAFANVSKGE 601 Query: 511 NDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYP 550 ++T+ ++KR P G K+ S D P Sbjct: 602 IEKTLETFFTRFRQQQFKRSCIPDGPKVGTVSLSPRGDLRMP 643 >gi|228470873|ref|ZP_04055718.1| glutamine-dependent NAD+ synthetase [Porphyromonas uenonis 60-3] gi|228307270|gb|EEK16284.1| glutamine-dependent NAD+ synthetase [Porphyromonas uenonis 60-3] Length = 647 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 135/634 (21%), Positives = 242/634 (38%), Gaps = 91/634 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+A A V D N ++ + +A G++++ EL I+GY DL + + Sbjct: 6 VKVAAAVPYVRVADCYYNTSRIKEMIFQAEELGVEILTTPELSITGYTCGDLFHQSFLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ L +T + ++VG P + +E + N V G I+ K LPNY EF Sbjct: 66 QAQKALCQLVEETAETDVMVIVGMPVKVEEKLFNGAVAFQHGKILGAIPKTYLPNYREFQ 125 Query: 125 EKRTFIS-----------GYSNDP----IVFRDIR--LGILICEDIWKNSNICKHLKKQG 167 EKR F G P I+F+ + +GI ICED+W L G Sbjct: 126 EKRWFSPSDSLQYKTVQMGSHTVPIGRNIIFKCGQVGIGIEICEDMWTPFTPGTRLSLYG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K +++G S +Y + G+ +L++ G +F + Sbjct: 186 AHIIFNLSASNENAGKHDYLRSLISGATSQSICGYVYASSGYGESSTDLVYTGKAFIAEV 245 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMSDDSASTMYI---------------- 267 ++ +M+ F E+ +++ + + S ++ + Sbjct: 246 -GKIVKEMRRFEYKERMIVSDIDVSRIHGERLINSSFKSAVNHFTDEEELESIPFTLRSE 304 Query: 268 ---------------------PLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 P + + V L ++ +IG+SGG+DSA Sbjct: 305 AKSQPMDRVIDRNPFMPEGANPEERCHEMFQIQVCGLIQRLKHMRAEHAVIGISGGLDSA 364 Query: 307 LCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + +A ++ + + +P TS ++ + A +ALG + I + Sbjct: 365 LALLVTAEAFDLLGLDRKQIIAVTMPGFGTSERTYRNGYAMMQALGVTIREIDIKEATEQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 S + + EN Q+R R ILM L+N A ++ T + SEI++G+ T GD Sbjct: 425 HLSAID--YKGNREDATFENAQARERTQILMDLANMYHAPVIGTGDLSEIALGWCTFNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT V + W +H +G PL I+ S EL P Sbjct: 483 HMSMYAVNSGITKTSVQLIVGWYATH--KAGDTPLATT-LQDIVATPISPELLPIKDTKT 539 Query: 476 --HQTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVE----HL 521 Q Q + PY + D I + + + + + Y + +++ Sbjct: 540 GNEQQTQNLVGPYELHDFFIYHFLLDGFEPKKIFYLAKVAFEGAYTPQEIKHWMGVFFKR 599 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S + P Sbjct: 600 FFSQQFKRNAMPDGPKVLSVSLSSRGEWRMPSDA 633 >gi|332297495|ref|YP_004439417.1| NAD+ synthetase [Treponema brennaborense DSM 12168] gi|332180598|gb|AEE16286.1| NAD+ synthetase [Treponema brennaborense DSM 12168] Length = 679 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 124/667 (18%), Positives = 236/667 (35%), Gaps = 123/667 (18%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 + A A V D N ++A + G LI+F EL I+GY DL +++ + Sbjct: 6 FRAACASPAVTVADCVKNADAIIEQIQQAAQHGAALIVFPELSITGYTCGDLFLQRTLQR 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + ++ + ++T GA +VG P + + N + G ++AV K +PNY+EF+ Sbjct: 66 SAVAQLERIAAETAGCGALSLVGLPLAADDTLYNCAAYVYGGEVVAVVPKTFIPNYAEFY 125 Query: 125 EKRTF---------------ISGYSNDP-----------------IVFRDIRLGILICED 152 E+R F G + + RD + ICED Sbjct: 126 ERRHFSPAPDANAPDAACTRTEGKTVCLSQRFPAVPFGTDILIRDVRNRDAVIAAEICED 185 Query: 153 IWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD 212 +W + + GA + +L+AS K + R +V Q + + +Y + G+ Sbjct: 186 VWVPAAPSQRHALSGATVIANLSASNEIIGKAEYRRMLVQSQSARLQCAYLYADAGNGES 245 Query: 213 --ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNY-------------- 256 +++F + + L + + F ++ + L + Sbjct: 246 TTDMVFAAHNIAAENGSVL-AESELFGTGLIFADFDLELLLQERRRTGTFAQCARDAGVG 304 Query: 257 --------------------MSDDSASTMYIPLQEEEADYNA------CVLSLRDYVQKN 290 ++P E L ++ Sbjct: 305 SYRSIYVDLPSRAEAEADELRYRRIDPHPFVPSGTRERTERCRRVVELQAEGLAKRLRHT 364 Query: 291 NFHKVIIGLSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKA 345 N +IGLSGG+DS L + +A + ++ + +P T+ ++ +A +K Sbjct: 365 NARTAVIGLSGGLDSTLALLVTAEAFRRCKLDPAGIEAVTMPCFGTTERTHRNAVRLSKR 424 Query: 346 LGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTT 405 L + +PI + V F+ + E + EN Q+R R ILM ++N + +++ T Sbjct: 425 LHTSFREIPIAEAVRQHFADIGH--DESVHDVTYENAQARERTQILMDVANKTGGLVIGT 482 Query: 406 SNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 + SE ++G+ T GD + + KT V L +W ++ + IL Sbjct: 483 GDLSESALGWATYNGDHMSMYGVNSSVPKTLVRYLVAWFADEADSA--DAELAAVLRDIL 540 Query: 466 EKSPSAELRP------HQTDQESLPPYPILDDIIKRIVENEESFI--------------- 504 + S EL P Q +E + PY + D + ++ S Sbjct: 541 DTPVSPELLPPEDGAISQKTEELVGPYELHDFFLYYVLRRGFSPAKIYYLARKAFCSGGK 600 Query: 505 NNDQEYND----------------ETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--D 546 + + D + ++ + ++KR P G K+ + D Sbjct: 601 ASAEGVPDCETARAAGVYRPETVLKWLKIFYRRFFSQQFKRSCMPDGAKVGTVNLSPRGD 660 Query: 547 RLYPISN 553 P Sbjct: 661 WRMPSDA 667 >gi|258650735|ref|YP_003199891.1| NAD+ synthetase [Nakamurella multipartita DSM 44233] gi|258553960|gb|ACV76902.1| NAD+ synthetase [Nakamurella multipartita DSM 44233] Length = 679 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 147/652 (22%), Positives = 252/652 (38%), Gaps = 111/652 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + + D N A + + QG+ + LF EL ++GY +DL+ +++ + A Sbjct: 13 RVAACTADVWIADPTRNAAGIAAVARQCSEQGVAVALFPELSLTGYAIDDLLGQQALLDA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +AI L + T D I+VG P + ++ + N V+L G+++ V KI+LPNY EF+E Sbjct: 73 VHAAIGELCTATADLLPVIIVGAPLRHRDRLFNCAVVLHRGSVLGVVPKIHLPNYREFYE 132 Query: 126 KRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 +R F SG + +G+ ICED++ L Sbjct: 133 RRQFASGDGIVGQSIPVAGQDAPFGTDLLFPAADLPGLTIGVEICEDMFVPVPPSSGLAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + R + Q +Y G+ +L +DG + F Sbjct: 193 AGATVLLNLSGSPITIGRADTRAALCRAQSMRCLSAYLYAAAGRGESTTDLSWDGQTSIF 252 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQL------SQWNYMSDDSASTMYIPL-------- 269 + L + F+E +T D Q + + A +P Sbjct: 253 EN-GVLLAKGPRFAEDPVVTVADVDLDRLRQERARQGTFDDNRRAVGGPVPRTVEFTLQP 311 Query: 270 -------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q+ YN V L ++ V+IG+SGG+D Sbjct: 312 PDADLGLRRVVERFPFVPADPERLAQDCYEAYNIQVDGLVQRLRAIGTRTVVIGVSGGLD 371 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S +A A+ + N++ +P T + +A A +ALG + L I Sbjct: 372 STHALIVAARAMDLLGYPRTNIRGFTMPGFATGTSTKANAWALMRALGITANELDIRPAA 431 Query: 360 NHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + + EE I EN+Q+ +R + L L+NH ++L T + SE+++G+ T Sbjct: 432 RQMLADLDHPFGRGEEVYDITFENVQAGLRTDYLFRLANHHHGIVLGTGDLSELALGWST 491 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP- 475 GD +N + KT + L W S + I SIL S EL P Sbjct: 492 YGVGDQMSHYNVNAGVPKTLIQHLIRWVAGLADFS---DDVDEILLSILGTEISPELIPV 548 Query: 476 -----HQTDQESLPPYPILDDIIKRIVE-----NEESFI-------------------NN 506 Q+ ++S+ PY + D + + ++ +F+ Sbjct: 549 KDGEVPQSTEKSIGPYELQDFNLFYTLRYGFPPSKIAFLAWHAWHDVDGGLWPIGFPPER 608 Query: 507 DQEYNDETVR-----YVEHLLYGSEYKRRQAPVGTKITA---KSFGRDRLYP 550 + Y+ +R +V+ S++KR P G K++A S D P Sbjct: 609 RRAYDLAPIRQWLTVFVKRYFGFSQFKRSAMPNGPKVSAGGSLSPRGDWRAP 660 >gi|291515933|emb|CBK65143.1| NH(3)-dependent NAD(+) synthetase [Alistipes shahii WAL 8301] Length = 641 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 130/630 (20%), Positives = 230/630 (36%), Gaps = 88/630 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+A A + V D N + EEA R+G++++ F EL ++ Y DL+ +++ + Sbjct: 7 LKVAAAVPHVRVADCDYNTERMAAMAEEAARRGVEIVAFPELGVTAYTCGDLLLQQTLLD 66 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A++ L T ++ G P + + N V+ G ++ V K +P+Y EF+ Sbjct: 67 AADEALERLVRATRKLPLTLIAGAPLRHGSTLYNCAVVFTQGKVLGVVPKTYIPDYGEFY 126 Query: 125 EKRTFISGYSND-----------------PIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 E R F SG GI ICED+W + L G Sbjct: 127 ENRWFASGAGISDEHIAVAGQQADFGADLTFEVNGAEFGIEICEDLWTAAPPSSQLALNG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A+ +F+L+ASP K ++V Q +Y + G+ +L+F G + + Sbjct: 187 AKVIFNLSASPESVGKHAYLRQLVAQQSGRAIAAYVYCSAGFGESTTDLVFAGNAVIAEN 246 Query: 226 QQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMS------------------------- 258 + + FS EQ + + ++ + + Sbjct: 247 -GCILREAARFSPDEQLVVADVDIERLEFERRRNTSFRANEGATENTVIEMKIPEGLRGV 305 Query: 259 ---DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 D ++P E E + L + K ++G+SGG+DS L Sbjct: 306 ALDRDIDPMPFVPKDEADRSERCEEIFRIQSHGLAQRMVHTRSEKAVVGISGGLDSTLAL 365 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + + + I +P T+ ++ +A + LG +PI D F Sbjct: 366 LVTARTFDFLHLDRAGIIGITMPGFGTTDRTYNNALELMRGLGVTIREIPIRDACTQHFQ 425 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + L G EN Q+R R ILM ++N +++ T + SE+++G+ T GD Sbjct: 426 DIG--LDPGCRGAAYENAQARERTQILMDVANMEGGLVIGTGDLSELALGWATYNGDQMS 483 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQ 477 + + KT V L W + + T I++ S EL P Q Sbjct: 484 MYGVNASVPKTLVRHLVKWAAA----TEQDAATRATLLDIIDTPVSPELLPADAEGRIAQ 539 Query: 478 TDQESLPPYPILDDIIKRIVENEESFI--------NNDQEYNDETVRYVE----HLLYGS 525 ++ + PY + D + + D Y+ + + Sbjct: 540 KTEDLVGPYELHDFFLYNFLRAGYGPAKILLLAEQAFDGSYDRAAILRWLTVFVRRFFTQ 599 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISN 553 ++KR P G K+ + + D P Sbjct: 600 QFKRSAMPDGPKVGSVTLSPRGDWRMPSDA 629 >gi|257783992|ref|YP_003179209.1| NAD+ synthetase [Atopobium parvulum DSM 20469] gi|257472499|gb|ACV50618.1| NAD+ synthetase [Atopobium parvulum DSM 20469] Length = 676 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 135/669 (20%), Positives = 244/669 (36%), Gaps = 116/669 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANR-QGMDLILFTELFISGYPPEDLVFKKSFI 63 +K+A V D+A N+ A EEA +G +++ EL I+GY EDL ++ + + Sbjct: 6 IKVASITPRVRVADVAFNVESCLAAIEEAAGNRGAKVVVLPELCITGYTCEDLFWQDALL 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 A + ++ + T D A +++G P + + N +L G ++ + K +P Y+EF Sbjct: 66 DAAERGLVSIAARTADVDALLLLGLPVRVASKLYNCAAVLFRGELLGLVPKRYVPMYNEF 125 Query: 124 HEKRTFISGYSNDPIVFRD--------------------IRLGILICEDIWKNSNICKHL 163 +E R F+SG V + +G ICED+W Sbjct: 126 YEGRHFVSGPKTVTSVDFGLLGEVPFGTNQLFACDTIPELVVGAEICEDLWVPMPPSNSH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+ASP K R ++V Q + + Y + G+ +L+F G + Sbjct: 186 AVAGATLICNLSASPALAGKSAYRRQLVAQQSARLICGYAYASAGEGESTTDLVFSGHNL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWH----------------------------------- 246 + + L F E ++E Sbjct: 246 VVENGRVL-ADSGVFGEGIAVSEIDVLSLAADRRRTSTFEVAPTPEDYKHLTTYFSLEFD 304 Query: 247 --------------YDQQLSQWNYMSDDSASTMYIPLQEEEADYNA---------CVLSL 283 +D + S+ + + + P D A L Sbjct: 305 GEGEDSAHDAASCGHDGEGSEISVRTPLTRFVDPHPFVPAMDDARATRCEEILSIQAHGL 364 Query: 284 RDYVQKNNFHKVIIGLSGGIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLED 338 + +IG+SGG+DS L + V A + + + +P T+ ++ + Sbjct: 365 ASRLAHTGSDHAVIGISGGLDSTLALLVTVRAFDQLGYDRSGIVAVTMPGFGTTDRTYTN 424 Query: 339 AAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS 398 A ++LG + I D V F+ + +V EN Q+R R ILM ++N Sbjct: 425 AIELVQSLGADLREISIVDSVLQHFADIDHDQDIHD--VVYENAQARERTQILMDVANQV 482 Query: 399 KAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTE 458 M++ T + SE+++G+ T GD + + KT V L + G + Sbjct: 483 GGMVIGTGDLSELALGWATYNGDQMSMYGINASVPKTLVRYLVDYCADTYEEQGEDEIAH 542 Query: 459 VIPPSILEKSPSAELRPH-------QTDQESLPPYPILDDIIKRIVENEESFINN----- 506 V +L+ S EL P Q ++ + PY + D + ++ + + Sbjct: 543 V-LRDVLDTPVSPELLPSAADGSIEQKTEDLVGPYELHDFFLFHVLRHGSGPLKVLRLAE 601 Query: 507 --------DQEYNDETVRYV----EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPIS 552 + Y+ ET+ + + ++KR P G K+ + S D P Sbjct: 602 CAFGTDTDHEVYDHETIVHWLKVFYRRFFSQQFKRSAMPDGPKVGSVSLSPRGDLRMPSD 661 Query: 553 NKFRDHISE 561 +SE Sbjct: 662 ASSSLWLSE 670 >gi|326330350|ref|ZP_08196660.1| putative NH(3)-dependent NAD(+) synthetase [Nocardioidaceae bacterium Broad-1] gi|325951887|gb|EGD43917.1| putative NH(3)-dependent NAD(+) synthetase [Nocardioidaceae bacterium Broad-1] Length = 674 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 134/650 (20%), Positives = 248/650 (38%), Gaps = 106/650 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V D A N + E + +G+ + LF EL +SGY +DLV +++ + A Sbjct: 13 RVAACTIPISVADPAANAREVIAQARECSEEGVAVALFPELCLSGYSIDDLVLQRTLLDA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +AI + + + IVVG P + + VLN+ V++ G ++ V K LPNY EF+E Sbjct: 73 VHAAISAIVVASEELLPVIVVGAPLRHGDRVLNTAVVIHGGEVLGVVPKSYLPNYREFYE 132 Query: 126 KRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 KR + +G +D+ + ICED+W Sbjct: 133 KRWYSTGDDADGTIMLGGEEVPLSNGLLFRCTDVKDLVFHVEICEDMWVPVPPSAKAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +L+ASP + + R +V + +Y G+ +L +DG + ++ Sbjct: 193 GATVLLNLSASPVTVGRSEARRLLVQSASARCAAAYVYTAAGPGESTTDLSWDGQTMVYE 252 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS----------------------- 261 +L + + F + T D + + + + Sbjct: 253 L-GELLGETERFPDSARRTVVDVDLERIRAERIRQSTFDDNRRAEGGYHSEIEFELAPPL 311 Query: 262 ---------ASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFH-KVIIGLSGGIDS 305 ++P + YN V L +Q K++IG+SGG+DS Sbjct: 312 TGDGLRRKVDRFPFVPDDPEKLALDCYEAYNIQVSGLEKRLQSIGPDTKIVIGVSGGLDS 371 Query: 306 ALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 +A A+ + ++ +P TS + +A +ALG Y+ L I Sbjct: 372 THALIVAAKAMERLGRPASDILAFTMPGFATSDDTKSNAIHLMEALGTTYETLDIRPTAT 431 Query: 361 HFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + E + EN+Q+ +R + L ++N ++L T + SE+++G+ T Sbjct: 432 QMLKEIGHPAGDGEPVYDVTFENVQAGLRTDFLFRIANQRGGIVLGTGDLSELALGWATY 491 Query: 419 -YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH- 476 GD +N + KT + L W + G + + +IL++ S EL P Sbjct: 492 GVGDQMSHYNVNAGVPKTLIQHLIRWVITTEQFDG---TADEVLQAILDQEISPELVPGE 548 Query: 477 --QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQEYN------------------ 511 Q+ ++ + PY + D + V N + +F+ + ++ Sbjct: 549 ELQSTEQKIGPYALQDFTLFHTVRNGFTPSKIAFLAWNAWHDVEAGEWPPGFPEGKRTAY 608 Query: 512 -----DETVRYVEHLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISN 553 + + +++KR P G K++ S D P Sbjct: 609 GMKEIRAWLEVFVKRFFANQFKRSALPNGPKVSNGGTMSPRGDWRMPSDA 658 >gi|313826865|gb|EFS64579.1| NAD+ synthetase [Propionibacterium acnes HL063PA1] gi|314979103|gb|EFT23197.1| NAD+ synthetase [Propionibacterium acnes HL072PA2] gi|315089649|gb|EFT61625.1| NAD+ synthetase [Propionibacterium acnes HL072PA1] gi|327334026|gb|EGE75741.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL096PA3] Length = 689 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 142/671 (21%), Positives = 250/671 (37%), Gaps = 119/671 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G D+ + +CED+W Sbjct: 135 KRHFAVGTGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSE-QNFMTEWHYD----QQLSQWNYMSDDSASTMYIP--- 268 DG + ++ LA + E + + D ++L Q ++ + A P Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFDDNALAQPAQAPWRT 314 Query: 269 -------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVII 297 Q+ YN V LR ++ K++I Sbjct: 315 TIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKIVI 374 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A+ + ++ +P T+ + +A +ALG +V Sbjct: 375 GVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPCEV 434 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 L I MS + E + EN+Q+ +R + L ++N ++L T + SE Sbjct: 435 LDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLSE 494 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 495 LALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTEI 551 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINND 507 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 552 SPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVGSWS 611 Query: 508 QEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP-- 550 + DE R G+++KR P G K+ + S D P Sbjct: 612 PGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSLSPRGDWRMPSD 671 Query: 551 -ISNKFRDHIS 560 + + D + Sbjct: 672 AVVRAWLDDLE 682 >gi|160893991|ref|ZP_02074770.1| hypothetical protein CLOL250_01546 [Clostridium sp. L2-50] gi|156864369|gb|EDO57800.1| hypothetical protein CLOL250_01546 [Clostridium sp. L2-50] Length = 667 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 142/665 (21%), Positives = 252/665 (37%), Gaps = 109/665 (16%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M ++IA +G++ N + Q +D+I+ EL ++GY DL + Sbjct: 9 MKHLVRIASVSPRVHLGNVTKNCEEIETVYRTYAEQ-VDVIVTPELSLTGYTCGDLFVNR 67 Query: 61 SFIQACSSAIDTLKSDTHD---GGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINL 117 I + L T + GA +VVG P + + N L G ++A+ K+ L Sbjct: 68 RLIDRAEEGLLQLAKMTAEYGKKGAALVVGVPYEVDGELFNCGAFLWNGTVLALTPKVYL 127 Query: 118 PNYSEFHEKRTFISGY--SNDPIVFRD-----------------------IRLGILICED 152 PNY EF+EKR F SG N + D + G+ ICED Sbjct: 128 PNYGEFYEKRWF-SGRRVENRTVEMADGSETLFGNSILLEMTDPNQQEEHVTFGMEICED 186 Query: 153 IWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ- 211 +W + L QGAE L +L+AS K + R + S +Y + + Sbjct: 187 LWTPIAPGRLLALQGAEILLNLSASNEVIGKEQYRRTLTGSMSSSCICGYVYTSAGAYES 246 Query: 212 -DELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEW--------------------HYDQQ 250 +L+F G + ++ +L ++K F + + ++ ++D Sbjct: 247 TSDLVFSGHNLMYEN-GKLLGEIKPFEDGILIRDFNMTKIRHDRLANKSFAECKRNFDAG 305 Query: 251 LSQWNYMS-------DDSASTMYIPLQEEEADYNAC-------VLSLRDYVQKNNFHKVI 296 + A P + C V L+ ++ + ++ Sbjct: 306 EYMTVTCEKVFAEKKEVCARVSMTPFVPSKNRLERCRSIFAMQVAGLQRRIEATHASCIV 365 Query: 297 IGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 +G+SGG+DS L ++ A+ E V I +P T+ ++ ++ + LGC Sbjct: 366 VGVSGGLDSTLALLVSAQAVKNLGLPPETVTGITMPGFGTTKRTKSNSTTLMELLGCDIR 425 Query: 352 VLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 + I D V F+ + Q E I EN Q+R R ILM ++N ++ T + SE+ Sbjct: 426 EISIVDSVRQHFADIGQ--DEAVHDITYENCQARERTQILMDVANKEGGFVIGTGDLSEL 483 Query: 412 SVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 ++G+ T GD + + KT V L +G + +VI I++ S Sbjct: 484 ALGWCTYNGDHMSMYAVNTSIPKTLVRTLVDEVGHDMDRNGFPGIKDVI-EDIIDTPVSP 542 Query: 472 ELRP-------HQTDQESLPPYPILDDIIKRIVENE------------------ESFINN 506 EL P Q ++++ Y + D + + E+ + Sbjct: 543 ELLPPNADGTIAQKTEDTVGSYILHDFFLYYTLRYGMEPEEVYDLCKEAVRQSVEALQDG 602 Query: 507 DQE---YNDETVRYVEH----LLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRD 557 + E + DE ++ + + ++KR P G K+ S D P +F D Sbjct: 603 ETEAYTFTDEEIKKWQKVFYTRFFRQQFKRNCMPDGVKVGTVSVSPRGDLRLPSEIEFED 662 Query: 558 HISEE 562 ++ E Sbjct: 663 FLTFE 667 >gi|288802172|ref|ZP_06407612.1| glutamine-dependent NAD+ synthetase [Prevotella melaninogenica D18] gi|288335139|gb|EFC73574.1| glutamine-dependent NAD+ synthetase [Prevotella melaninogenica D18] Length = 641 Score = 435 bits (1119), Expect = e-119, Method: Composition-based stats. Identities = 138/634 (21%), Positives = 232/634 (36%), Gaps = 102/634 (16%) Query: 15 VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLK 74 V D N+ + + A QG+++I+F EL I+GY +DL ++ + A+ L Sbjct: 2 KVADTKFNLIETEKQIAIAEGQGVEIIVFPELSITGYTCQDLFQQQLLLDDTEQAVIELL 61 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS 134 T ++VG P +LN +++ G ++ + K LPNYSEF+EKR F S Sbjct: 62 EFTRQLDITVIVGAPVAVGALLLNCALVIQQGKLLGIVAKTFLPNYSEFYEKRWFASSQD 121 Query: 135 NDPIVFR-------------------DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLN 175 P R I ICED+W + HL GAE +F+L+ Sbjct: 122 LRPQHIRFAGNNIRVTPELQIFRTSEGATFAIEICEDVWAPTPPSNHLALAGAEIIFNLS 181 Query: 176 ASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQM 233 S K ++ Q + +Y + G+ +++F G + F+ L Q Sbjct: 182 TSDELIGKHAYLKSLLAQQSARTISGYVYSSSGFGESTQDVVFGGNALIFEN-GSLVKQS 240 Query: 234 KHF--SEQNFMTEWHYDQQLSQWNYMS--------------------------------- 258 + F Q ++E + S+ S Sbjct: 241 ERFQLEPQLVISEIDIENLRSERRTNSTFVNAQRPVASGLAGITGQIGELALHVDCQPPL 300 Query: 259 --------DDSASTMYIPLQE-----EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + +IP E + YN V L + N IIG+SGG+DS Sbjct: 301 NPREFTLTREFDQHPFIPKSENMQEACDEIYNIQVSGLAKRLVHTNCKSAIIGISGGLDS 360 Query: 306 ALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L + V K + + + +P T+ ++ ++A A + LG + I V Sbjct: 361 TLALLVVVKTFDKLGLDRKGIVGVTMPGFGTTGRTYKNAMALMERLGITIREIDIKASVL 420 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F + E EN Q+R R ILM LSN +++ T + SE+++G+ T G Sbjct: 421 QHFEDIDH--DPEVHDSTYENAQARERTQILMDLSNQMNGLVIGTGDLSELALGWCTYNG 478 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP----- 475 D + + KT L + + I I+E S EL+P Sbjct: 479 DHMSMYAVNAGVPKTLTQYLVRYAA----DTTKDENVRQILTDIVETPISPELKPADDKG 534 Query: 476 --HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVEHL---- 521 Q ++ + PY + D + ++ + Y D + + + Sbjct: 535 EIAQKTEDLVGPYELHDFFLYYVLRCGFRPSKIYWMAQNAFRGVYPDSVILHWMRIFFRR 594 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + S D P Sbjct: 595 FFSQQFKRSCLPDGPKVGSVSLSPRGDWRMPSDA 628 >gi|314932532|gb|EFS96363.1| NAD+ synthetase [Propionibacterium acnes HL067PA1] Length = 689 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 142/671 (21%), Positives = 250/671 (37%), Gaps = 119/671 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSE-QNFMTEWHYD----QQLSQWNYMSDDSASTMYIP--- 268 DG + ++ LA + E + + D ++L Q ++ + A P Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFDDNALAQPAQAPWRT 314 Query: 269 -------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVII 297 Q+ YN V LR ++ K++I Sbjct: 315 TIFTLDPPHDDIGLERPVNRFPFVPNGPDQLAQDCYEAYNIQVYGLRRRLESMGSPKIVI 374 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A+ + ++ +P T+ + +A +ALG +V Sbjct: 375 GVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPCEV 434 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 L I MS + E + EN+Q+ +R + L ++N ++L T + SE Sbjct: 435 LDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLSE 494 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 495 LALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTEI 551 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINND 507 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 552 SPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVGSWP 611 Query: 508 QEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP-- 550 + DE R G+++KR P G K+ + S D P Sbjct: 612 PGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSLSPRGDWRMPSD 671 Query: 551 -ISNKFRDHIS 560 + + D + Sbjct: 672 AVVRAWLDDLE 682 >gi|313808558|gb|EFS47018.1| NAD+ synthetase [Propionibacterium acnes HL087PA2] gi|313819098|gb|EFS56812.1| NAD+ synthetase [Propionibacterium acnes HL046PA2] gi|313821625|gb|EFS59339.1| NAD+ synthetase [Propionibacterium acnes HL036PA1] gi|313823761|gb|EFS61475.1| NAD+ synthetase [Propionibacterium acnes HL036PA2] gi|314926101|gb|EFS89932.1| NAD+ synthetase [Propionibacterium acnes HL036PA3] gi|314960940|gb|EFT05041.1| NAD+ synthetase [Propionibacterium acnes HL002PA2] gi|314985915|gb|EFT30007.1| NAD+ synthetase [Propionibacterium acnes HL005PA2] gi|314989225|gb|EFT33316.1| NAD+ synthetase [Propionibacterium acnes HL005PA3] gi|315084910|gb|EFT56886.1| NAD+ synthetase [Propionibacterium acnes HL027PA2] gi|315087441|gb|EFT59417.1| NAD+ synthetase [Propionibacterium acnes HL002PA3] gi|327450400|gb|EGE97054.1| NAD+ synthetase [Propionibacterium acnes HL013PA2] gi|328757666|gb|EGF71282.1| NAD+ synthetase [Propionibacterium acnes HL020PA1] gi|332676654|gb|AEE73470.1| glutamine-dependent NAD(+) synthase [Propionibacterium acnes 266] Length = 689 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 142/671 (21%), Positives = 250/671 (37%), Gaps = 119/671 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSE-QNFMTEWHYD----QQLSQWNYMSDDSASTMYIP--- 268 DG + ++ LA + E + + D ++L Q ++ + A P Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFDDNALAQPAQAPWRT 314 Query: 269 -------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVII 297 Q+ YN V LR ++ K++I Sbjct: 315 TIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKIVI 374 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A+ + ++ +P T+ + +A +ALG +V Sbjct: 375 GVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPCEV 434 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 L I MS + E + EN+Q+ +R + L ++N ++L T + SE Sbjct: 435 LDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLSE 494 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 495 LALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTEI 551 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINND 507 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 552 SPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVGSWS 611 Query: 508 QEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP-- 550 + DE R G+++KR P G K+ + S D P Sbjct: 612 PGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSLSPRGDWRMPSD 671 Query: 551 -ISNKFRDHIS 560 + + D + Sbjct: 672 AVVRAWLDDLE 682 >gi|50843699|ref|YP_056926.1| NAD synthetase [Propionibacterium acnes KPA171202] gi|289425931|ref|ZP_06427683.1| NAD+ synthetase [Propionibacterium acnes SK187] gi|295131790|ref|YP_003582453.1| NAD+ synthetase [Propionibacterium acnes SK137] gi|50841301|gb|AAT83968.1| glutamine-dependent NAD(+) synthetase [Propionibacterium acnes KPA171202] gi|289153707|gb|EFD02416.1| NAD+ synthetase [Propionibacterium acnes SK187] gi|291375470|gb|ADD99324.1| NAD+ synthetase [Propionibacterium acnes SK137] gi|313765123|gb|EFS36487.1| NAD+ synthetase [Propionibacterium acnes HL013PA1] gi|313771610|gb|EFS37576.1| NAD+ synthetase [Propionibacterium acnes HL074PA1] gi|313812007|gb|EFS49721.1| NAD+ synthetase [Propionibacterium acnes HL083PA1] gi|313817151|gb|EFS54865.1| NAD+ synthetase [Propionibacterium acnes HL059PA1] gi|313832441|gb|EFS70155.1| NAD+ synthetase [Propionibacterium acnes HL007PA1] gi|313834129|gb|EFS71843.1| NAD+ synthetase [Propionibacterium acnes HL056PA1] gi|314916870|gb|EFS80701.1| NAD+ synthetase [Propionibacterium acnes HL005PA4] gi|314919048|gb|EFS82879.1| NAD+ synthetase [Propionibacterium acnes HL050PA1] gi|314921122|gb|EFS84953.1| NAD+ synthetase [Propionibacterium acnes HL050PA3] gi|314956238|gb|EFT00610.1| NAD+ synthetase [Propionibacterium acnes HL027PA1] gi|314958737|gb|EFT02839.1| NAD+ synthetase [Propionibacterium acnes HL002PA1] gi|314968763|gb|EFT12861.1| NAD+ synthetase [Propionibacterium acnes HL037PA1] gi|314975106|gb|EFT19201.1| NAD+ synthetase [Propionibacterium acnes HL053PA1] gi|314977516|gb|EFT21611.1| NAD+ synthetase [Propionibacterium acnes HL045PA1] gi|314985895|gb|EFT29987.1| NAD+ synthetase [Propionibacterium acnes HL005PA1] gi|315096853|gb|EFT68829.1| NAD+ synthetase [Propionibacterium acnes HL038PA1] gi|315100085|gb|EFT72061.1| NAD+ synthetase [Propionibacterium acnes HL059PA2] gi|315102754|gb|EFT74730.1| NAD+ synthetase [Propionibacterium acnes HL046PA1] gi|315107307|gb|EFT79283.1| NAD+ synthetase [Propionibacterium acnes HL030PA1] gi|327333034|gb|EGE74766.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL096PA2] gi|327448742|gb|EGE95396.1| NAD+ synthetase [Propionibacterium acnes HL043PA1] gi|327449063|gb|EGE95717.1| NAD+ synthetase [Propionibacterium acnes HL043PA2] gi|327455558|gb|EGF02213.1| NAD+ synthetase [Propionibacterium acnes HL087PA3] gi|327456216|gb|EGF02871.1| NAD+ synthetase [Propionibacterium acnes HL083PA2] gi|328756777|gb|EGF70393.1| NAD+ synthetase [Propionibacterium acnes HL087PA1] gi|328759059|gb|EGF72675.1| NAD+ synthetase [Propionibacterium acnes HL025PA2] gi|328762168|gb|EGF75664.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL099PA1] Length = 689 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 142/671 (21%), Positives = 250/671 (37%), Gaps = 119/671 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSE-QNFMTEWHYD----QQLSQWNYMSDDSASTMYIP--- 268 DG + ++ LA + E + + D ++L Q ++ + A P Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFDDNALAQPAQAPWRT 314 Query: 269 -------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVII 297 Q+ YN V LR ++ K++I Sbjct: 315 TIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKIVI 374 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A+ + ++ +P T+ + +A +ALG +V Sbjct: 375 GVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPCEV 434 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 L I MS + E + EN+Q+ +R + L ++N ++L T + SE Sbjct: 435 LDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLSE 494 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 495 LALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTEI 551 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINND 507 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 552 SPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVGSWP 611 Query: 508 QEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP-- 550 + DE R G+++KR P G K+ + S D P Sbjct: 612 PGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSLSPRGDWRMPSD 671 Query: 551 -ISNKFRDHIS 560 + + D + Sbjct: 672 AVVRAWLDDLE 682 >gi|289428164|ref|ZP_06429863.1| NAD+ synthetase [Propionibacterium acnes J165] gi|289158644|gb|EFD06848.1| NAD+ synthetase [Propionibacterium acnes J165] Length = 689 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 141/671 (21%), Positives = 250/671 (37%), Gaps = 119/671 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G D+ + +CED+W Sbjct: 135 KRHFAVGTGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSE-QNFMTEWHYD----QQLSQWNYMSDDSASTMYIP--- 268 DG + ++ LA + E + + D ++L Q ++ + A P Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFDDNALAQPAQAPWRT 314 Query: 269 -------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVII 297 Q+ YN V LR ++ K++I Sbjct: 315 TIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKIVI 374 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A+ + ++ +P T+ + +A +ALG +V Sbjct: 375 GVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPCEV 434 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 L I MS + E + EN+Q+ +R + L ++N ++L T + SE Sbjct: 435 LDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLSE 494 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 495 LALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTEI 551 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINND 507 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 552 SPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVGSWS 611 Query: 508 QEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP-- 550 + DE R G+++KR P G ++ + S D P Sbjct: 612 PGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPRVVAGGSLSPRGDWRMPSD 671 Query: 551 -ISNKFRDHIS 560 + + D + Sbjct: 672 AVVRAWLDDLE 682 >gi|313829234|gb|EFS66948.1| NAD+ synthetase [Propionibacterium acnes HL063PA2] gi|315110544|gb|EFT82520.1| NAD+ synthetase [Propionibacterium acnes HL030PA2] Length = 689 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 142/671 (21%), Positives = 250/671 (37%), Gaps = 119/671 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSE-QNFMTEWHYD----QQLSQWNYMSDDSASTMYIP--- 268 DG + ++ LA + E + + D ++L Q ++ + A P Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFDDNALAQPAQAPWRT 314 Query: 269 -------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVII 297 Q+ YN V LR ++ K++I Sbjct: 315 TIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKIVI 374 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A+ + ++ +P T+ + +A +ALG +V Sbjct: 375 GVSGGLDSTHALLVAAKAMDQMRRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPCEV 434 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 L I MS + E + EN+Q+ +R + L ++N ++L T + SE Sbjct: 435 LDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLSE 494 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 495 LALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTEI 551 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINND 507 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 552 SPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVGSWP 611 Query: 508 QEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP-- 550 + DE R G+++KR P G K+ + S D P Sbjct: 612 PGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSLSPRGDWRMPSD 671 Query: 551 -ISNKFRDHIS 560 + + D + Sbjct: 672 AVVRAWLDDLE 682 >gi|298247183|ref|ZP_06970988.1| NAD+ synthetase [Ktedonobacter racemifer DSM 44963] gi|297549842|gb|EFH83708.1| NAD+ synthetase [Ktedonobacter racemifer DSM 44963] Length = 672 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 133/647 (20%), Positives = 237/647 (36%), Gaps = 96/647 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A+ V DI N A EA +G L LF EL I+GY DL ++ +Q Sbjct: 30 LRVAVVVPELRVADIRYNTQIIIDALREAAARGSRLALFPELCITGYTCADLFYQSVLLQ 89 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 S A+ + + VVG P + N + G ++ + K LP+ +E++ Sbjct: 90 QASEALLAIAQAAAEAQIAAVVGLPMHLGGKLYNCAAFVSDGKVLGIVPKTYLPSTNEYY 149 Query: 125 EKRTFIS-----------GYSNDPI---------VFRDIRLGILICEDIWKNSNICKHLK 164 E+R F S G + P F GI ICED+W + Sbjct: 150 EERWFSSAKDCPLSEIQLGGESIPFGTDLLFSANNFSGCMFGIEICEDLWAVQPPSGSMV 209 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + + +AS K + R ++ Q + +Y G+ +++F G ++ Sbjct: 210 LAGATVILNPSASNEILGKTEYRRALIQQQAARCLAIYLYAGAGPGESTTDVVFSGGAYI 269 Query: 223 FDGQQQLAFQMKH-FSEQNFMTEWHYDQQLSQWNYMS----------------------- 258 + + LA + FS Q + + + S Sbjct: 270 NENGRMLAETERFLFSTQMAVADVDVQSMNHERLRNSSFSSALPDRTYRTLAFNLPERAG 329 Query: 259 ---------DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 +D T ++P + ++ + L ++ + I LSGG+ Sbjct: 330 ASEQTELLRNDLTPTPFVPADPSQRAKHCQEIFHLQSMGLAKRLKHTGIKNITIALSGGL 389 Query: 304 DSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + A +E + I +P T+ ++ +A A++LG +PI D Sbjct: 390 DSTLALLVVQQAFEILELPREGIVAITMPGFGTTNRTRSNAERLAESLGISLRQIPIRDA 449 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F + + EN Q+R R ILM + N + + T + SE+++G+ T Sbjct: 450 VLQHFKDIGH--DPNLHNVTYENAQARERTQILMDIGNQVGGLAVGTGDLSELALGWCTY 507 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP--- 475 D ++ + KT V L W + +T + I S EL P Sbjct: 508 NADHMSMYHVNAGVPKTLVRYLIEWCAESVYSG----VTSEVLHDINATPISPELLPLGE 563 Query: 476 ----HQTDQESLPPYPILDDIIKRIVENE-----------ESFINNDQEYN-DETVRYVE 519 Q + ++ PY + D + ++V + + F + Q E ++ Sbjct: 564 NDALVQETEATIGPYLLHDFFLFQVVRHGFTPRKVYWLACQVFAKHHQPAEVLEWLKMFY 623 Query: 520 HLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNK---FRDHISE 561 + +++KR P G K+ + + D P +R + E Sbjct: 624 QRFFAAQFKRSAMPDGPKVGSVALSPRGDWRMPSDASSALWRQELEE 670 >gi|313813912|gb|EFS51626.1| NAD+ synthetase [Propionibacterium acnes HL025PA1] Length = 689 Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 142/671 (21%), Positives = 250/671 (37%), Gaps = 119/671 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQTSRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSE-QNFMTEWHYD----QQLSQWNYMSDDSASTMYIP--- 268 DG + ++ LA + E + + D ++L Q ++ + A P Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFDDNALAQPAQAPWRT 314 Query: 269 -------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVII 297 Q+ YN V LR ++ K++I Sbjct: 315 TIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKIVI 374 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A+ + ++ +P T+ + +A +ALG +V Sbjct: 375 GVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPCEV 434 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 L I MS + E + EN+Q+ +R + L ++N ++L T + SE Sbjct: 435 LDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLSE 494 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 495 LALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTEI 551 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINND 507 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 552 SPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVGSWP 611 Query: 508 QEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP-- 550 + DE R G+++KR P G K+ + S D P Sbjct: 612 PGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSLSPRGDWRMPSD 671 Query: 551 -ISNKFRDHIS 560 + + D + Sbjct: 672 AVVRAWLDDLE 682 >gi|313794103|gb|EFS42123.1| NAD+ synthetase [Propionibacterium acnes HL110PA1] gi|313803224|gb|EFS44420.1| NAD+ synthetase [Propionibacterium acnes HL110PA2] gi|313839242|gb|EFS76956.1| NAD+ synthetase [Propionibacterium acnes HL086PA1] gi|314963998|gb|EFT08098.1| NAD+ synthetase [Propionibacterium acnes HL082PA1] gi|315078355|gb|EFT50392.1| NAD+ synthetase [Propionibacterium acnes HL053PA2] gi|315081448|gb|EFT53424.1| NAD+ synthetase [Propionibacterium acnes HL078PA1] gi|327334445|gb|EGE76156.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL097PA1] gi|327457535|gb|EGF04190.1| NAD+ synthetase [Propionibacterium acnes HL092PA1] Length = 689 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 142/672 (21%), Positives = 248/672 (36%), Gaps = 121/672 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELSSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLTFHVEVCEDLWVPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALAGAVVEVNLSGSPITVGKSRQRHELCKVASSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD------QQLSQWNYMSDDSASTMYIP-- 268 DG + ++ L FS + D ++L Q ++ + A P Sbjct: 255 DGQTMIYEN-GSLLAATDRFSPEPGYCLADIDLNLLRQERLRQGSFDDNALAQPAQAPWR 313 Query: 269 --------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVI 296 Q+ YN V LR ++ K++ Sbjct: 314 TTIFTLDPPHDDIGLERPVNRFPFVPNDPDQLAQDCYEAYNIQVYGLRRRLESMGSPKIV 373 Query: 297 IGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 IG+SGG+DS +A A+ + ++ +P T+ + +A +ALG + Sbjct: 374 IGVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDMCRALGIPCE 433 Query: 352 VLPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 VL I MS + E + EN+Q+ +R + L ++N ++L T + S Sbjct: 434 VLDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLS 493 Query: 410 EISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E+++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 494 ELALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTE 550 Query: 469 PSAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINN 506 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 551 ISPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVGSW 610 Query: 507 DQEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP- 550 + DE R G+++KR P G K+ + S D P Sbjct: 611 PPGFRDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSLSPRGDWRMPS 670 Query: 551 --ISNKFRDHIS 560 + + D + Sbjct: 671 DAVVRAWLDDLE 682 >gi|326791323|ref|YP_004309144.1| NAD+ synthetase [Clostridium lentocellum DSM 5427] gi|326542087|gb|ADZ83946.1| NAD+ synthetase [Clostridium lentocellum DSM 5427] Length = 644 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 128/633 (20%), Positives = 239/633 (37%), Gaps = 91/633 (14%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K+ VGD N+ + +E+ G + +F EL ++GY DL ++ + + Sbjct: 6 IKVCTITPKLSVGDCNYNLKQIYNCIKESETAGASIAVFPELCLTGYTCGDLFYQSNLLA 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L T I+VG P + + N+ +L G ++ + K LPNY+EF+ Sbjct: 66 ETEKNIKQLLDATATSEQLILVGAPIAHEGHLFNTACVLFKGKLLGIVPKSFLPNYNEFN 125 Query: 125 EKRTFISGYS---------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLK 164 EKR F + + + ++F+ LGI ICED+W + Sbjct: 126 EKRWFSAAHEILHSKMVYAGQNVTISSYLLFKAKHIPYFCLGIDICEDLWSPLSPSTCHT 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K+ +R +V +Y + + +L+F G Sbjct: 186 IYGATIIANLSASNECVGKMNQRKTLVAQHSLKTMCSYLYTSSGIYESTSDLVFSGHQLI 245 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------ 258 ++G L + + FS +N +T D + + Sbjct: 246 YEG-GSLLAESELFSRENLITYATLDLERLYNQRLRLNYATSPLPFKELNYQIIEFDLAL 304 Query: 259 ------DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSA 306 + +IP +E ++ + L ++ + +IIG+SGG+DS Sbjct: 305 QTKELEKNITPHPFIPKEEKTRTQRCKSIFAIQTHGLARRMEHTHAEHLIIGVSGGLDST 364 Query: 307 LCAAIAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNH 361 L + V ++ N + + +P TS ++ ++A K LG + I Sbjct: 365 LALLVCVRSVKLLNRPPCHIIGVTMPGFGTSDRTYQNAINLMKLLGITQKEISIVPSTLQ 424 Query: 362 FFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGD 421 + + EN Q+R R ILM L+N +++ + SE+++G+ T GD Sbjct: 425 HLKDIEHDIS--IHDTTYENAQARERTQILMDLANQYNGLVVGAGDLSELALGWATYNGD 482 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------ 475 + + KT + L + + PL + I IL S EL P Sbjct: 483 HMSMYGVNASVPKTLIRYLIEYVAYYESE----PLVQEILFDILATPVSPELLPTSDSGD 538 Query: 476 -HQTDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDE----TVRYVEHLL 522 Q ++ + PY + D I ++ + + + +Y++E ++ Sbjct: 539 ITQKTEDLVGPYELHDFFIYYMLRFGYAPSKIYHLAQMAFNNQYSNETLLKWLKVFYKRF 598 Query: 523 YGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ + D P Sbjct: 599 FAQQFKRSCLPDGPKVGSIGLSPRGDWRMPSDA 631 >gi|323529669|ref|YP_004231821.1| NAD+ synthetase [Burkholderia sp. CCGE1001] gi|323386671|gb|ADX58761.1| NAD+ synthetase [Burkholderia sp. CCGE1001] Length = 682 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 138/659 (20%), Positives = 250/659 (37%), Gaps = 114/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A V D N + R +EA +QG L++F EL IS Y +DL +++ + A Sbjct: 15 RVAVAVPVCRVADPQFNAKETLRLAQEAAQQGAVLVVFPELGISAYTCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +AI + + + + A +V+G P + + + N +++ G + V K LPNY EF+E Sbjct: 75 CETAIGEIVAASTNIPAVLVIGAPLKIEHKLFNCALVISNGKLCGVVPKSYLPNYGEFYE 134 Query: 126 KRTFISGY--SNDPIVFRD------------------IRLGILICEDIWKNSNICKHLKK 165 R F + S+ + R I ICED+W Sbjct: 135 ARQFSAAENASSTHVTLCGQQAPFSASLLFDVPDAPLFRFHIEICEDVWVPVPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V Q + +Y + G+ +L +DG + + Sbjct: 195 AGATVLVNLSASNIVIGKSAYRHQLVGQQSARCLSAYLYSSAGRGESTTDLAWDGQALIY 254 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + +L + + F + + + D + M + Sbjct: 255 EN-GELLAESERFLDTSHIIYGDVDLERLSRERMRQTTFAQSTRRHAGEVARFQTVSVPV 313 Query: 262 --------------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 Y+P YN V L + N KV+IG+SG Sbjct: 314 ALPDAEHLPLMRAINRFPYVPSNPATRDERCAEVYNIQVQGLLQRLGAANISKVVIGVSG 373 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + A+ + ++ +P TS ++L+ A +A+GC + + I Sbjct: 374 GLDSTQALLVCAKAMDRLKLPRSHILGYTMPGFATSSRTLQQAKDLMQAVGCSMEEIDIR 433 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E+ + EN+Q+ R + L L+N +A+++ T + SE+++G Sbjct: 434 PSCMQMLKDLHHPFSAGEKQYDVTFENVQAGERTSHLFRLANFHQAIVIGTGDLSELALG 493 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD ++ + KT + L W G G + IL S EL Sbjct: 494 WCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESGQV---GEAGSHVLEQILATEISPEL 550 Query: 474 RPH-------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ------------- 508 P Q + + PY + D + ++ ++ +F+++ Sbjct: 551 VPGKVDKVIDQKTESIIGPYELQDFNLYYLLRFGFSPSKVAFLSHSAWADRERGIWLAGK 610 Query: 509 -----EYNDETVRY-----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 EY ++ E S++KR P K+ + S D P ++ Sbjct: 611 SVTRNEYTLADIKRNLAIFAERFFRTSQFKRSCIPNAPKVGSGGSLSPRGDWRAPSDSE 669 >gi|308234429|ref|ZP_07665166.1| NAD+ synthetase [Atopobium vaginae DSM 15829] gi|328944276|ref|ZP_08241740.1| NAD synthetase [Atopobium vaginae DSM 15829] gi|327491195|gb|EGF22970.1| NAD synthetase [Atopobium vaginae DSM 15829] Length = 647 Score = 431 bits (1110), Expect = e-118, Method: Composition-based stats. Identities = 133/640 (20%), Positives = 235/640 (36%), Gaps = 86/640 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDLVFKKSFI 63 +K+A + VG ++ N+A A LI+ EL I+GY EDL ++ I Sbjct: 6 IKVATRSPHVQVGCVSENVAACYEEILSAYRDDEARLIVLPELSITGYTCEDLFWQAQLI 65 Query: 64 QACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 ++ L + A I+VG P + + N ++ G ++ + K LP Y+EF Sbjct: 66 TEAQQGVERLIQKCANLDALILVGAPVSVRSNLYNCAIVFHRGRLLGIVPKHALPTYNEF 125 Query: 124 HEKRTFISGYSNDPIV----FRDIRLG----------------ILICEDIWKNSNICKHL 163 +E R F G + F + G + ICED+W Sbjct: 126 YELRHFTPGEHEVTYINFASFSHVPFGMNQLFTCSSVPQLTVAVEICEDLWTPCPPSIAH 185 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS K R +VT Q +H+ +Y + +L+F + Sbjct: 186 ALAGATIICNLSASDAQIGKCAYRRNLVTNQSAHLIAGYVYACAGWTESTQDLVFSSHNL 245 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS----------------------- 258 + L + K FS TE D + S Sbjct: 246 IAEN-GTLLAESKPFSHTGVSTEIDVDMLDQERRRTSTYTSTIAAIKTYVTTSFDLQVRP 304 Query: 259 ----DDSASTMYIPLQEEEADYNA------CVLSLRDYVQKNNFHKVIIGLSGGIDSALC 308 ++P Q E A L + + V++G+SGG+DS L Sbjct: 305 CTLTRFIDPHPFVPAQTAELSARAEDVLSIQAHGLAKRLLHTHTKTVVLGVSGGLDSTLA 364 Query: 309 AAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFF 363 + A + + + +P T+ ++ +AA A L +PI V F Sbjct: 365 LLVCARAFDMIGLDRAGIIAVTMPGFGTTERTHGNAAVLADVLHATLKEIPISAAVLQHF 424 Query: 364 SLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMS 423 ++ + ++ +V EN Q+R R ILM ++N A+++ T + SE+++G+ T GD Sbjct: 425 EDIAHDVHDK--DVVYENSQARERTQILMDIANQEGALVIGTGDLSELALGWATYNGDHM 482 Query: 424 GGFNPLKDLYKTQVFQLASWRNSHGITS-GLGPLTEVIPPSILEKSPSAELRP------- 475 + + KT V + + TS + + IL S EL P Sbjct: 483 SMYAVNVGVPKTLVRHVVAHVVHSCSTSFDESQDLQDVLLDILATPVSPELLPAHDDGTI 542 Query: 476 HQTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETV----RYVEHLLY 523 Q ++ + PY + D + +++ + Y+ +T+ + + Sbjct: 543 AQKTEDLVGPYELHDFFLYQVLRRGFRPSKVFRLAQTAFADSYDKKTILMWLKTFYRRFF 602 Query: 524 GSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 ++KR P G K+ + + D P D + E Sbjct: 603 SQQFKRSCLPDGPKVGSCALSPRGDFRMPSDAFCTDWLRE 642 >gi|282854547|ref|ZP_06263883.1| NAD+ synthetase [Propionibacterium acnes J139] gi|282582408|gb|EFB87789.1| NAD+ synthetase [Propionibacterium acnes J139] gi|314922030|gb|EFS85861.1| NAD+ synthetase [Propionibacterium acnes HL001PA1] gi|314965986|gb|EFT10085.1| NAD+ synthetase [Propionibacterium acnes HL082PA2] gi|314980691|gb|EFT24785.1| NAD+ synthetase [Propionibacterium acnes HL110PA3] gi|315090990|gb|EFT62966.1| NAD+ synthetase [Propionibacterium acnes HL110PA4] gi|315095215|gb|EFT67191.1| NAD+ synthetase [Propionibacterium acnes HL060PA1] gi|315105332|gb|EFT77308.1| NAD+ synthetase [Propionibacterium acnes HL050PA2] gi|327328842|gb|EGE70602.1| putative NH(3)-dependent NAD(+) synthetase [Propionibacterium acnes HL103PA1] Length = 689 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 141/671 (21%), Positives = 249/671 (37%), Gaps = 119/671 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A +GD A N+A E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RVAACTTTVHIGDPASNVAGILDTCRELDSRSVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+T++ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIETVRQASRSLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G D+ + +CED+W Sbjct: 135 KRHFAVGAGTTGMIDLSGRQKSHAASTEIPFGPDQLFRATDLPDLIFHVEVCEDLWMPVA 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP K ++RHE+ S +Y G+ +L + Sbjct: 195 PSSQAALTGAIVEVNLSGSPITVGKSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSE-QNFMTEWHYD----QQLSQWNYMSDDSASTMYIP--- 268 DG + ++ LA + E + + D ++L Q ++ + A P Sbjct: 255 DGQTMIYENGSLLAATDRFSPEPGYCLADIDLDLLRQERLRQGSFDDNALAQPTQAPWRT 314 Query: 269 -------------------------------LQEEEADYNACVLSLRDYVQKNNFHKVII 297 Q YN V LR ++ +++I Sbjct: 315 TTFTLDPPHDDIGLERPVNRFPFVSNDPDQLAQNCYEAYNIQVYGLRRRLESMRSPQIVI 374 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A+ + ++ +P T+ + +A +ALG +V Sbjct: 375 GVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTDHTKNNALDLCRALGIPCEV 434 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 L I MS + E + EN+Q+ +R + L ++N ++L T + SE Sbjct: 435 LDIRPAATQMLKGMSHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLSE 494 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 495 LALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTEI 551 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINND 507 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 552 SPELVPAHPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIIFLSHHAWRDASVGSWP 611 Query: 508 QEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP-- 550 + DE R G+++KR P G K+ + S D P Sbjct: 612 PGFPDEDRHSYDLSAIKDWTRLFLRRFVGNQFKRSTLPNGPKVVAGGSLSPRGDWRMPSD 671 Query: 551 -ISNKFRDHIS 560 + + D + Sbjct: 672 AVVRAWLDDLE 682 >gi|313836422|gb|EFS74136.1| NAD+ synthetase [Propionibacterium acnes HL037PA2] gi|314929035|gb|EFS92866.1| NAD+ synthetase [Propionibacterium acnes HL044PA1] gi|314971017|gb|EFT15115.1| NAD+ synthetase [Propionibacterium acnes HL037PA3] gi|328906681|gb|EGG26456.1| NAD synthetase [Propionibacterium sp. P08] Length = 689 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 136/671 (20%), Positives = 244/671 (36%), Gaps = 119/671 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +IA +GD N E + + + + +F EL ++GY +DL+ + + A Sbjct: 15 RIAACTTPVHIGDPGSNAGGILDTCRELDSRNVAIAVFPELCLTGYAIDDLLLQDVVLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+ L+ + I+VG P Q + N V++ G ++ V K +LPNY EF+E Sbjct: 75 VLDAIEALRQASRGLFPVIIVGAPLQRGNRLYNCAVVIHRGQVLGVVPKSHLPNYREFYE 134 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F +G D+ + +CED+W + Sbjct: 135 KRHFAAGADTTGTIDLSGRQKSHAASTEVPFGADQLFQATDLPDLIFHVEVCEDLWVPVS 194 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA +L+ SP + ++RHE+ S +Y G+ +L + Sbjct: 195 PSSRAALAGAVVEVNLSGSPITVGRSRQRHELCKVTSSRNLQAYVYAAAGPGESSTDLSW 254 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNF-MTEWHYD----------------------QQLSQ 253 DG + ++ L + E F + + D Sbjct: 255 DGQTMIYENGSLLTATDRFSPEPGFCLADIDLDLLRQERLRQGSFDDNALAQPAEAPWRT 314 Query: 254 WNYMSDDSA----------STMYIPL------QEEEADYNACVLSLRDYVQKNNFHKVII 297 + D ++P Q+ YN V LR ++ +++I Sbjct: 315 TAFTLDPPHDDIGLERPVNRFPFVPHDPDQLAQDCYEAYNIQVYGLRRRLESIGSPRIVI 374 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A+ + ++ +P T+ + +A ALG +V Sbjct: 375 GVSGGLDSTHALLVAAKAMDQMGRPRTDILAFTMPGFATTNHTKNNALDLCHALGIPCEV 434 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 L I M + E + EN+Q+ +R + L ++N ++L T + SE Sbjct: 435 LDIRPAATQMLKGMGHPAGDGAEVYDVTFENVQAGLRYDYLFRIANQRGGIVLGTGDLSE 494 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W S G + T V+ S+L Sbjct: 495 LALGWCTFGVGDQMSHYGVNTGVPKTLIQHLIRWCISSGQFN---EATNVVLESVLGTEI 551 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EESFINND 507 S EL P Q+ Q + PY + D + ++ + + S + Sbjct: 552 SPELVPARPGEKIQSTQAKIGPYELQDFTLYHLLRHGMRPSRIVFLSHHAWRDASVGSWP 611 Query: 508 QEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP-- 550 ++DE R G+++KR P G K+ + S D P Sbjct: 612 PGFHDEDRHSYDLSAIKGWTRLFLRRFIGNQFKRSTLPNGPKVVAGGSLSPRGDWRMPSD 671 Query: 551 -ISNKFRDHIS 560 ++ + D + Sbjct: 672 AVARAWLDDLE 682 >gi|329847616|ref|ZP_08262644.1| putative glutamine-dependent NAD+ synthetase [Asticcacaulis biprosthecum C19] gi|328842679|gb|EGF92248.1| putative glutamine-dependent NAD+ synthetase [Asticcacaulis biprosthecum C19] Length = 654 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 139/641 (21%), Positives = 235/641 (36%), Gaps = 88/641 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A +GD N+ + E A G D++++ EL +S Y +DL ++ + Sbjct: 14 VRVACVTPKVHLGDPMANLTEHLSLAERAGAAGADIVVYPELSLSAYSLDDLFTQEVLLD 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L + +VVG P + + N ++ G + + K LPNY E++ Sbjct: 74 AVKEALAALIFFSTKIRPVLVVGLPLRVDGALYNCAAVIANGKALGIVPKSYLPNYREYY 133 Query: 125 EKRTFISGYSN-----DPIVFRD----------IRLGILICEDIWKNSNICKHLKKQGAE 169 E+R F SG D ++F G+ ICED+W + L GA Sbjct: 134 ERRYFASGAGVVNRLVDGVLFGTKQVFAAGGSAFTFGVEICEDLWVPNTPATPLAVAGAN 193 Query: 170 FLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQ 227 + +L+ASP K + R + + Y G+ +L +DG S ++ Sbjct: 194 LIVNLSASPVVIGKSRARKRLCAAASERLFCAYAYSAAGPGESTTDLAWDGQSLVYELGN 253 Query: 228 QLAFQMKHFSEQNFMTEWH-----------------------------YDQQLSQWNYMS 258 +A + S+ + + +D + + Sbjct: 254 LIAEGERFTSDSLMLADVDLERVAAERLKTGTFHDSGQGFATDVARTGFDWKPHELTDFH 313 Query: 259 DDSASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 A Y+P + +N V L V V+IG+SGG+DS +A Sbjct: 314 RQVARFPYVPDDASRLDEDCYEAFNIQVHGLMQRVSSTGSQNVVIGVSGGLDSTHALIVA 373 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A + N+ +P TS S DA KALG + L I + Sbjct: 374 CKAFDRLGIPRANIHGYTMPGFGTSTGSKNDALKLMKALGISAEELDIRPAAKRMLMDIG 433 Query: 368 QFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSG 424 E+ IV EN+Q+ +R + L L+ K ++ T + SE+++G+ T GD Sbjct: 434 HPYAQGEKVYDIVFENVQAGLRTDFLFRLAGIKKGFVVGTGDLSELALGWCTYGVGDHMS 493 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-----HQTD 479 +N KT + L W + + G I S+L + S EL P Q Sbjct: 494 HYNVNCGAPKTLIQHLIRWAANREFDAKTGR----ILTSVLTREISPELIPIEAGQIQRT 549 Query: 480 QESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYV-----EHLLYGSE 526 ++ + PY + D + I S+ +Y +R S+ Sbjct: 550 EDKVGPYELQDFNLYYITRFGLKPSKVAFLSYQAWKDKYELRVIRQWLEVFLYRFFTISQ 609 Query: 527 YKRRQAPVGTK-ITAKSFGR--DRLYPISNK---FRDHISE 561 +KR P G K I+ + D P + D + E Sbjct: 610 FKRSAVPNGPKLISGGALSPRGDWRAPSDGNAKIWLDELRE 650 >gi|152990287|ref|YP_001356009.1| glutamine-dependent NAD+ synthetase [Nitratiruptor sp. SB155-2] gi|151422148|dbj|BAF69652.1| glutamine-dependent NAD+ synthetase [Nitratiruptor sp. SB155-2] Length = 626 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 128/638 (20%), Positives = 245/638 (38%), Gaps = 89/638 (13%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +++A + DI N + +++ + + LF EL I+GY DL F++ Sbjct: 1 MFGFIRVAAISPKLFLADIEANTKHICSLIQ--SQKEVAITLFPELCITGYTMGDLFFQE 58 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 Q A++ +K DG ++VG P +E + N V++ I+ + K L NY Sbjct: 59 IVHQKILEALEEIKKCVMDG--VVIVGAPLWYKERLYNCAVVMQNQKIVGIVPKSYLANY 116 Query: 121 SEFHEKRTFISGY-------------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQG 167 EF+EKR F SG ++ ++++ G+ ICED+W + + G Sbjct: 117 REFYEKRWFHSGKDIKGATLLDVPFGTDLLFRYKELCFGLEICEDLWTLTPPSFTMAAAG 176 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+AS K R E+V Q + + +Y + G+ +L + GA+ + Sbjct: 177 ANVIFNLSASDELVGKHAYRKELVKTQSARIVGAYVYASSGVGESSSDLCYSGATIIAEN 236 Query: 226 QQQLAFQMKHFSEQNFMTEWHYD--------------------------------QQLSQ 253 + + + F + +T D + + Sbjct: 237 -GSILAEGERFVFDDVVTIADIDIEKLKILRQSETSFGDADVQNFREVALSPLPETKDVK 295 Query: 254 WNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQK-NNFHKVIIGLSGGIDSALCAAIA 312 Y + + ++ +L V K++IG+SGG+DS L + Sbjct: 296 RPYNPHPFVPPKNMREEVCHEIFSIQSSALARRVMHIAKETKLVIGVSGGLDSTLALLVC 355 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 ++ + +P T+ + + A +A+G Y + I V F + Sbjct: 356 AKVCEILQKPYSDIVGVSMPGFGTTDATKKSARKLCEAIGVTYKQIDITKSVLRHFEDID 415 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 + + EN Q+R R ILM L+N +++ T + SEI++G+ T GD +N Sbjct: 416 H--DPDICDVTYENAQARERTQILMDLANEVGGIVIGTGDLSEIALGFATYNGDHMAMYN 473 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQE 481 + KT V + W I I+ + S EL P Q ++ Sbjct: 474 VNAGVPKTLVRYVIEWVAMQQTDITQ------ILLEIINRPVSPELLPAKNGKITQKTED 527 Query: 482 SLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRYVEHL----LYGSEYKR 529 + PY + D + ++ + + +++Y++ ++ L + +++KR Sbjct: 528 IIGPYELHDFFLYHFLKYGAEPKKIVAMAKVAFEEKYDECMIKKWLKLFLKRFFANQFKR 587 Query: 530 RQAPVGTKITAKSFGR--DRLYPISNK---FRDHISEE 562 P G K+ + D P + + +E Sbjct: 588 NAMPDGVKVGTIALSPRGDWRMPSDANVKIWLHELGDE 625 >gi|300311219|ref|YP_003775311.1| glutamine-dependent NAD synthetase [Herbaspirillum seropedicae SmR1] gi|300074004|gb|ADJ63403.1| glutamine-dependent NAD synthetase protein [Herbaspirillum seropedicae SmR1] Length = 685 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 141/655 (21%), Positives = 240/655 (36%), Gaps = 114/655 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A + V D N + E+A +G L+ F EL +S Y EDL +++ + A Sbjct: 15 RVAVAVPDCKVADPGFNAQRTIALAEQAAARGAVLVSFPELGLSAYSCEDLFQQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ ++ + A ++VG P + + N V+L G I+ V K LPNYSEF+E Sbjct: 75 SLQALQSVLEASMRIPAALIVGLPLKVDHQLYNCAVVLHHGRILGVVPKSYLPNYSEFYE 134 Query: 126 KRTFIS----------------GYSNDPIV----FRDIRLGILICEDIWKNSNICKHLKK 165 R F S G+ + + D R I ICED+W Sbjct: 135 ARQFSSADCAVTRSVHLLGQEVGFGSHLLFEIRNIPDFRFHIEICEDVWVPIPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V+ Q + +Y + G+ +L +DG + Sbjct: 195 AGATVLVNLSASNIVVGKSGYRHQLVSQQSARCLAAYLYSSAGNGESTTDLAWDGQALIC 254 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + +L + + F++ + D + + Sbjct: 255 EN-GELLAESERFAQGGHVIYADVDLERLSRERFHQTTFGQSVRRHADEVRRFEVVGFEV 313 Query: 262 --------------ASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 A Y+P Y+ V +L + KV+IG+SG Sbjct: 314 QIPQQQALPLQRRVARFPYVPANAEQRELRCREVYSIQVQALVQRLSSAGLKKVVIGVSG 373 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + A+ + N+ +P TS ++L A +GC + I Sbjct: 374 GLDSTHALLVCAKAMDKLGLPRSNILAYTMPGFATSSRTLVQAHQLMAQVGCSAQEIDIR 433 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E I EN+Q+ R N L L+NH A+++ T + SE+++G Sbjct: 434 PSCEQMLKDLGHPYSRGEPVYDITFENVQAGERTNHLFRLANHHGAIVIGTGDLSELALG 493 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + + W G P + +LE S EL Sbjct: 494 WCTYGVGDHMSHYNVNASVPKTLITHMVRWVAESGSLELKQPE---VLIHVLETEISPEL 550 Query: 474 -------RPHQTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYNDETVRY---- 517 P Q Q+ + PY + D + I+ + +F+ + ++ + Sbjct: 551 VPGASDGEPGQRTQDFIGPYELQDFNLYYILRYGFTPAKVAFLAHSAWHDRGVGHWPDGL 610 Query: 518 -------------------VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP 550 V S++KR P K+ + S D P Sbjct: 611 HGAHNEYSLPQIKKNLGIFVYRFFKTSQFKRSCVPNAPKVGSGGSLSPRGDWRAP 665 >gi|152992269|ref|YP_001357990.1| glutamine-dependent NAD+ synthetase [Sulfurovum sp. NBC37-1] gi|151424130|dbj|BAF71633.1| glutamine-dependent NAD+ synthetase [Sulfurovum sp. NBC37-1] Length = 631 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 128/626 (20%), Positives = 248/626 (39%), Gaps = 88/626 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A A V + N + +EA + + +++F EL ++GY DL ++ + + Sbjct: 6 RVASAVNKTTVANPQKNAEEILTLIKEAADKEVSVVVFPELTLTGYTASDLFLNQTLLAS 65 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + ++ + ++ + +++G + + + N +L G I+ + K LPN EF+E Sbjct: 66 QNESLQYILNNIEELDTIVILGIALLEADRLYNCAAVLQGGEILGIIPKSYLPNKKEFYE 125 Query: 126 KRTFISGYS---------------NDPIVFRDIR---LGILICEDIWKNSNICKHLKKQG 167 KR F+SG ++F D R G+ ICED+W + H+ G Sbjct: 126 KRQFVSGRDIVRTATELLGKEVPFGVDLLFTDGRNMTFGVEICEDLWAVTPPSNHMASNG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A LF+L+AS K + R E+V Q + +Y + G+ + ++ G + + Sbjct: 186 ANLLFNLSASNELIGKHEYREELVRTQSARCMAAYVYSSAGVGESTTDTVYGGHAIISEY 245 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSD-------------------------- 259 L Q + FS ++ + D + +W +++ Sbjct: 246 GTTL-AQNERFSLESSLITADIDLERMRWLRINESSYSDGRRKKTRLIKLKSLPMMSELQ 304 Query: 260 -DSASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA--- 309 D ++P + + + L + + K ++G+SGG+DS L Sbjct: 305 RDITPAPFVPSRYTDKKLRCDEIIHIQAHGLIKRMTHAHIKKALMGISGGLDSTLALLST 364 Query: 310 --AIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A + N+ + +P T+ ++ +A +ALG + I D+ F + Sbjct: 365 YRAFEIMGWDSRNIIAVTMPGFGTTSRTKSNAVKLCEALGVTLKEVDITDISLKEFDAIE 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 +E + EN+Q+R R +ILM ++N +++ T + SEI++G+ T GD + Sbjct: 425 HNPEELS--VTYENVQARARTSILMNMANQEGGLVIGTGDLSEIALGWSTYNGDHMSMYA 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQE 481 + KT + + + S+ + + S EL PH Q +E Sbjct: 483 LNSGIPKTLIRYVIEYYKSNKAIADIIDDILD-------TPISPELLPHSDDVIVQETEE 535 Query: 482 SLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRYVEH----LLYGSEYKR 529 + PY + D + ++ + D EY++ETV + ++KR Sbjct: 536 IVGPYELHDFFLYHFIKYGAKPDKIRFLAMKAFDIEYDEETVTKWLKVFLQRFFTQQFKR 595 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ S D P Sbjct: 596 SCMPDGPKVGTISLSPRADWKMPSDA 621 >gi|295691441|ref|YP_003595134.1| NAD+ synthetase [Caulobacter segnis ATCC 21756] gi|295433344|gb|ADG12516.1| NAD+ synthetase [Caulobacter segnis ATCC 21756] Length = 684 Score = 428 bits (1102), Expect = e-117, Method: Composition-based stats. Identities = 146/657 (22%), Positives = 240/657 (36%), Gaps = 111/657 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A A + D N EA+ G+ +I+F EL ++GY +DL+ ++ + A Sbjct: 22 RVATAVPKVTLADPVANAQSVLALAREAHDAGVAVIVFPELGLTGYTIDDLLQQEVLLDA 81 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +AI TL + D IVVG P +D + N+ V + G ++ V K LPNY EF+E Sbjct: 82 AEAAIATLAEASRDLSPMIVVGAPLRDAGRLYNTGVAIQGGAVLGVVPKSFLPNYREFYE 141 Query: 126 KRTFISGYS---------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLKK 165 +R F G ++F+ +GI ICED+W + Sbjct: 142 RRWFTPGAGVTGKTLSLAGQAVPFGTDVLFKASGPTPFTVGIEICEDVWTPNPPSTAQAL 201 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GAE L +L+AS K + R + Q +Y G+ +L +DG Sbjct: 202 AGAEILLNLSASNITIGKSETRRLLCASQSERAIAAYVYSAAGAGESSTDLAWDGHLDIH 261 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS-----------DDSASTMYIPLQ-- 270 + QL + FS T D + + M IP Sbjct: 262 EM-GQLLAETARFSTGPAWTFADIDVERIRQERMRVGSFGDAMALAPPRVPFRVIPFDFQ 320 Query: 271 ---------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 YN V L ++ + K++IG+SGG+ Sbjct: 321 PPAGDLALARGVERFPFTPSDPAKLRENCYEAYNIQVQGLARRLEASGLKKLVIGISGGL 380 Query: 304 DSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS +A A+ +EN+ LP TS ++ +A + KA+G L I Sbjct: 381 DSTQALLVAAKAVDQLALPRENILAYTLPGFATSDRTKSNAWSLMKAMGVTAAELDIRPA 440 Query: 359 VNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + E + EN+Q+ +R + L L+NH+ A+++ T + SE+++G+ Sbjct: 441 ATQMLKDLDHPFGRGEPVYDVTFENVQAGLRTDYLFRLANHNAALVVGTGDLSELALGWC 500 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD +NP KT + L + G T + IL S EL P Sbjct: 501 TYGVGDHMSHYNPNCGAPKTLIQHLIRFVAHSGDV---DAATTALLEDILATEISPELVP 557 Query: 476 H---QTDQESLPPYPILDDIIKRIVENEESFINND------------------------Q 508 Q + + PY + D + + + + Sbjct: 558 GEEVQATESFVGPYALQDFNLYYMTRYGMAPSKIAFLAWSAWHDAEKGGWPVGLPDNARR 617 Query: 509 EYN----DETVRYVEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP---ISNKF 555 Y+ + + +++KR P G KI+ A S D P +N + Sbjct: 618 AYDLPEIKRWMELFLKRFFANQFKRSAVPNGPKISSGGALSPRGDWRMPSDVTANAW 674 >gi|317404986|gb|EFV85346.1| glutamine-dependent NAD(+) synthetase [Achromobacter xylosoxidans C54] Length = 691 Score = 428 bits (1101), Expect = e-117, Method: Composition-based stats. Identities = 132/659 (20%), Positives = 245/659 (37%), Gaps = 113/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N A+ ++A + G L+ F EL +S Y +DL +K+ + A Sbjct: 18 RVAVGVPECKVADPAFNAAQTIALAQQAAQGGAVLVAFPELGLSAYTCDDLFHQKALLDA 77 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +A+D + T + ++VG P + + N V++ G I+ V K LPNYSEF+E Sbjct: 78 CEAALDQVARATAELDIAVIVGAPLRVAHQLYNCAVVIAGGRILGVVPKSFLPNYSEFYE 137 Query: 126 KRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLKK 165 R F + R + + ICED+W Sbjct: 138 ARQFSAADCAVATEIRLLDQTVPFGPELLFQMEKLPLFQFHVEICEDVWVPIPPSSFAAL 197 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V Q + +Y + G+ +L +DG + + Sbjct: 198 AGATVLVNLSASNIVVGKSAYRHQLVAQQSARCLAAYMYTSAGRGESSTDLAWDGQALIY 257 Query: 224 DGQQQLAFQMKHFSE-QNFMTEWHYDQQLSQW----------NYMSDDSASTMYIP---- 268 + + L + +E + ++ + D+ +P Sbjct: 258 ENGELLGESERFLNESHLLFADVDLERLSRERMHQTTFGQSARRHRDEVRKFRQVPVPVA 317 Query: 269 ---------------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + + YN V +L + + KV+IG+SG Sbjct: 318 APLEDAELPLERRVARFPYVPADPRRRDERCKEVYNIQVQALAQRLSASGMSKVVIGISG 377 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + A+ + N+ + +P TS ++L+ A +GC + I Sbjct: 378 GLDSTHALLVCAQAMDTLGLPRANILAVTMPGFATSTRTLQQARQLMAVVGCTASEVDIR 437 Query: 357 DLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + + I EN+Q+ R N L ++N + A+++ T + SE+++G Sbjct: 438 PSCLQMLKDLGHPYADGQPVYDITFENVQAGERTNHLFRIANFNNAIVIGTGDLSELALG 497 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD ++ + KT + L W G LG + +L S EL Sbjct: 498 WCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESGR---LGEAGAAVLLDVLGTDVSPEL 554 Query: 474 RPH-------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ------------- 508 P Q ++++ PY + D + + + +F+ Sbjct: 555 VPGGDDGKPTQKSEDTIGPYELQDFNLYYTLRYGFAPTKVAFLALAAWRDRDAGAWPEGG 614 Query: 509 -----EYNDETVRY-----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 +Y+ ++ ++ S++KR P K+ + S D P ++ Sbjct: 615 HVARNQYDLAAIKRNLKIFLDRFFRLSQFKRTCVPNAPKVGSGGSLSPRGDWRAPSDSE 673 >gi|84497435|ref|ZP_00996257.1| NAD(+) synthetase [Janibacter sp. HTCC2649] gi|84382323|gb|EAP98205.1| NAD(+) synthetase [Janibacter sp. HTCC2649] Length = 690 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 135/662 (20%), Positives = 238/662 (35%), Gaps = 120/662 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D A N A + G+ + LF EL +SGY +DL + ++ Sbjct: 13 RVAACTLPVTMADPAKNAAATIEQVRALHEDGVAVALFPELGLSGYAIDDLFMQDVLLEE 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI + T +VVG P + N V++ G +I V K LPNY EF+E Sbjct: 73 VDRAIVAVAEATAKLTPIVVVGAPLLIGNRLYNCAVVIQGGEVIGVAPKSYLPNYREFYE 132 Query: 126 KRTFISGYS---------------------------NDPIVFRDIRLGILICEDIWKNSN 158 KR F G + + + + ICED+W Sbjct: 133 KRWFAPGDDAVDTLINRPHWPGADEDGDIAYGTDLLFEATDVPGLVVHVEICEDMWVPVP 192 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 GA L +L+ASP + RH + + + +Y G+ +L + Sbjct: 193 PSHRAALAGATVLLNLSASPITVGRADDRHLLARSASARCNAAYLYAAASEGESSTDLSW 252 Query: 217 DGASFCFDGQQQLAFQMKHFSE-QNFMTEWHYDQ----QLSQWNYMSDDSASTMYIP--- 268 DG + ++ L + S Q + + D+ ++ Q ++ + + P Sbjct: 253 DGMTMVYEMGDLLGESERFPSGPQATVVDVDLDRLRQERIRQGSFDDNRRVEGIGEPGGE 312 Query: 269 -----------------------------------LQEEEADYNACVLSLRDYVQKNNFH 293 Q+ YN V L ++ Sbjct: 313 SFRVVAFELDPPTGDIGLRRKVDRFPFVPDDEARLAQDCYEAYNIQVSGLEQRLRAIGQP 372 Query: 294 KVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGC 348 K++IG+SGG+DS +A A+ + ++ +P TS + +A ++LG Sbjct: 373 KIVIGVSGGLDSTHALIVAAKAMDRLRRPRTDIIGFTMPGFATSDGTKSNAIHLMESLGI 432 Query: 349 KYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 ++ L I + EE + EN+Q+ +R + L +N ++L T Sbjct: 433 TFETLDIKPAATQMLKDLGHPAGNGEEVYDVTFENVQAGLRTDYLFRAANQRGGIVLGTG 492 Query: 407 NKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSIL 465 + SE+++G+ T GD + + KT + L W S G T V IL Sbjct: 493 DLSELALGWCTYGVGDQMSHYGVNTGVPKTLMQHLIRWVVSSKQFEGGVNETLV---EIL 549 Query: 466 EKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ------ 508 ++ S EL P Q+ ++S+ PY + D + ++ + +F+ Sbjct: 550 DQEISPELVPTKKGEKIQSTEDSVGPYSLQDFTLYHVLRRGYRPSKIAFLAQHAWSDKAT 609 Query: 509 -------------EYNDETVRYVE----HLLYGSEYKRRQAPVGTKI---TAKSFGRDRL 548 Y+ T+R+ + +++KR P G K+ S D Sbjct: 610 GDWPAGYPEGDRTAYDLATIRHWLEVFVKRYFNNQFKRSALPNGPKVVSGGTMSPRGDWR 669 Query: 549 YP 550 P Sbjct: 670 MP 671 >gi|328948652|ref|YP_004365989.1| NAD+ synthetase [Treponema succinifaciens DSM 2489] gi|328448976|gb|AEB14692.1| NAD+ synthetase [Treponema succinifaciens DSM 2489] Length = 662 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 131/649 (20%), Positives = 235/649 (36%), Gaps = 104/649 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++A + V D N + ++A + + L++F EL I Y DL +K+ + Sbjct: 6 FRVASVSPSLSVADCNFNSKQIIELVKKAQDKKIKLLVFPELSICAYTCADLFTQKTLQE 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + +T + VG P + N + G ++A+ K +PNYSEF+ Sbjct: 66 ECYIVLKNICEETKNCNILFCVGLPVELDSERFNCAAFVFKGKVLALIPKSFIPNYSEFY 125 Query: 125 EKRTFIS-------------GYSNDPIVF---------RDIRLGILICEDIWKNSNICKH 162 E R F S G + P I++ +CED+W + Sbjct: 126 ESRWFASFSENTVKQISLCKGLEDIPFGTDIFIQDENDSSIKISAELCEDLWVPFSPSTR 185 Query: 163 LKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGAS 220 GA + +L+AS K + R +VTG + IY N + ++IF G S Sbjct: 186 HALNGATIIANLSASNEVAGKAEYRRILVTGHSAKTVSAYIYANASHDESSTDMIFSGHS 245 Query: 221 FCFDGQQQLAFQMKHFS--EQNFMTEWHY------------------------------- 247 + + F ++ + + Sbjct: 246 IIA-ANGAIKAESGLFENTQEFLIADIDLEKLTQDRIKSTTFSRSTSFAKSEYKTIFVSG 304 Query: 248 ----------DQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVII 297 D+QL + + S + + + L ++ + +I Sbjct: 305 LQQEHFADNIDEQLYEKIDLHPFVPSDIQKRKERCFSIIEMQSEGLAKRLRHIHAQGAVI 364 Query: 298 GLSGGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 GLSGG+DS L + A K E + +I +P T+ ++ +A AK +G Sbjct: 365 GLSGGLDSTLALLVCARAFDKCNISREKIFSITMPAFGTTDRTFNNACLLAKEMGTTLKE 424 Query: 353 LPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 + I D V F + Q + + EN Q+R R +LM +N +++ T + SE++ Sbjct: 425 INIKDAVIQHFKDIGQDINT--HDVTYENCQARERTQVLMDFANKCNGIVIGTGDLSELA 482 Query: 413 VGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 +G+ T GD + + KT V L SW G L++V IL S E Sbjct: 483 LGWCTYNGDQMSMYGVNSSIPKTLVRHLVSWFADEAFEKGNKNLSDV-LNDILATPVSPE 541 Query: 473 LRP------HQTDQESLPPYPILDDIIKRIVE-----------NEESFINND-------- 507 L P Q +E + PY + D + ++ +++F+ + Sbjct: 542 LLPPSEGKISQKTEEIVGPYELHDFFLYYVLRWGFSPRKIYFLAQKAFLGKEDKATKTIY 601 Query: 508 -QEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 +E + ++ + ++KR P G K+ + D P Sbjct: 602 TKEIILKWLKNFYKRFFSQQFKRSCMPDGAKVGTVNLSPRGDWRMPSDA 650 >gi|73542295|ref|YP_296815.1| NAD synthetase [Ralstonia eutropha JMP134] gi|72119708|gb|AAZ61971.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase:NAD+ synthase [Ralstonia eutropha JMP134] Length = 682 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 138/659 (20%), Positives = 248/659 (37%), Gaps = 114/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N A+ +A +QG L+ F EL +S Y +DL +++ + A Sbjct: 15 RVAVGVPVCRVADPAFNAAETIALATQAAKQGAVLVAFPELGLSAYTCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +A+ T+ + A ++VG P + + + N V++ G ++ V K LPNY EF+E Sbjct: 75 CEAALGTIVEASRKLSAAMIVGMPLRVEHQLFNCAVVVARGRVLGVVPKSYLPNYWEFYE 134 Query: 126 KRTFI--------------------SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 R F +G + R ICED+W Sbjct: 135 ARQFSEADNAATDSIRLLGQDVPFGAGLLFEIEDIPFFRFHAEICEDVWVPIPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V+ Q + +Y + G+ +L +DG + Sbjct: 195 AGATVLVNLSASNIVIGKSGYRHQLVSQQSARCLAAYLYTSAGKGESSTDLAWDGQALIC 254 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM-------------------------- 257 + +L + + F++ + + D + M Sbjct: 255 EN-GELLAESERFADTSHVLFADVDVERLSRERMHQVTFGHSVRRHKAEVDKFRVVRFPL 313 Query: 258 ----------SDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 A Y+P YN V +L + + KV+IG+SG Sbjct: 314 EVSRDKALPLERKVARFPYVPADPRQRDERCHEVYNIQVQALVQRLSASKISKVVIGVSG 373 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + A+ + N+ +P TS ++L A + +GC + I Sbjct: 374 GLDSTHALLVCAKAMDRLGLPRSNILAYTMPGFATSDRTLRQARQLMELVGCTAREIDIR 433 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E+ + EN+Q+ R N L L+NH+ A+++ T + SE+++G Sbjct: 434 PSCLAMLKDLDHPYARGEKVYDVTFENVQAGERTNHLFRLANHNGAIVIGTGDLSELALG 493 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W G G + +L+ S EL Sbjct: 494 WCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQV---GDSGSEVLIHVLDTDISPEL 550 Query: 474 RPH-------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYNDE-------- 513 P Q + ++ PY + D + + ++ +F++ + E Sbjct: 551 VPGDSNHGPEQKTESTIGPYELQDFNLYYTLRFGFAPSKIAFLSLHAWGDRERGIWPNGP 610 Query: 514 -TVR--------------YVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 VR +++ S++KR P K+ + S D P ++ Sbjct: 611 HVVRNQYGLPDIKRNLGIFLDRFFRTSQFKRSCIPNAPKVGSGGSLSPRGDWRAPSDSE 669 >gi|311105838|ref|YP_003978691.1| NAD+ synthetase [Achromobacter xylosoxidans A8] gi|310760527|gb|ADP15976.1| NAD+ synthetase [Achromobacter xylosoxidans A8] Length = 685 Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 132/660 (20%), Positives = 246/660 (37%), Gaps = 115/660 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N A+ ++A + G L F EL +S Y +DL +K+ + Sbjct: 15 RVAVGVPECKVADPAFNAAQTIALAQQAAQGGAVLAAFPELGLSAYTCDDLFHQKALLDE 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C A+ + + T + +VVG P + + N V+ G ++ V K LPNY EF+E Sbjct: 75 CEEALARVVAATAEMDIAVVVGAPLRVAHQLFNCAVVAAGGRVLGVVPKSYLPNYGEFYE 134 Query: 126 KRTFISGYS---------------NDPIVFRDIR-----LGILICEDIWKNSNICKHLKK 165 R F +G ++F+ + + ICED+W Sbjct: 135 ARQFSAGDCAIVSEISLLGQTVPFGSELIFQMEKLPLFQFHVEICEDVWVPIPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V Q + +Y + G+ ++ +DG + + Sbjct: 195 AGATVLVNLSASNIVVGKSDYRHQLVAQQSARCLSAYMYTSAGRGESSTDMAWDGQALIY 254 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + +L + + F + + D + M + Sbjct: 255 EN-GELLGESERFLGHSHLLFSDVDLERLSRERMRQTTFGQSVRRHQDEVRKFRSVAVPV 313 Query: 262 ---------------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLS 300 A Y+P + Y+ V +L + + KV+IG+S Sbjct: 314 NPPLEDAELPLERRVARFPYVPADPQRRDARCKEVYSIQVQALVQRLSASGMSKVVIGIS 373 Query: 301 GGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS + A+ + N+ + +P TS ++L+ A + +GC + I Sbjct: 374 GGLDSTHALLVCAKAMDALELPRSNILAVTMPGFATSSRTLQQARKLMEVVGCTASEIDI 433 Query: 356 HDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 + + I EN+Q+ R N L ++N + A+++ T + SE+++ Sbjct: 434 RPSCLQMLKDLGHPYADGKPVYDITFENVQAGERTNHLFRIANFNNAIVIGTGDLSELAL 493 Query: 414 GYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 G+ T GD ++ + KT + L W G LG + +L S E Sbjct: 494 GWCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESGR---LGEEGAQVLLDVLGTDVSPE 550 Query: 473 LRPH-------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ------------ 508 L P Q ++S+ PY + D + + + +F+ Sbjct: 551 LVPGGADDKPVQKSEDSIGPYELQDFNLYYTLRYGFAPTKVAFLALAAWRDREAGAWPEG 610 Query: 509 ------EYNDETVRY-----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 +Y+ ++ ++ S++KR P K+ + S D P ++ Sbjct: 611 GHVARNQYDLAAIKRNLKIFLDRFFRLSQFKRSCVPNAPKVGSGGSLSPRGDWRAPSDSE 670 >gi|218283671|ref|ZP_03489632.1| hypothetical protein EUBIFOR_02226 [Eubacterium biforme DSM 3989] gi|218215660|gb|EEC89198.1| hypothetical protein EUBIFOR_02226 [Eubacterium biforme DSM 3989] Length = 634 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 131/636 (20%), Positives = 239/636 (37%), Gaps = 90/636 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 K A +GD N + + +E + L++F EL I+GY +DL ++ + + Sbjct: 8 KTAACTPEVFIGDPQANKEEILKCIQELDSD-TQLVVFPELCITGYTCQDLFYEHTLLNK 66 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + + + V+G P + + N I +I+ ++ K +P+Y+EF+E Sbjct: 67 AKQVLFEIVEELPE-NLVAVLGLPLEIDNKLYNCAAICFNHDILGIQVKTYIPSYNEFYE 125 Query: 126 KRTFISGYS----------------NDPIVFRDI----RLGILICEDIWKNSNICKHLKK 165 R F S ++ IVF+D LGI ICED+W + Sbjct: 126 TRWFSSASELKENTTFTYKNKKVPVSNHIVFKDTTTSACLGIEICEDLWVTIPVSSTHAL 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS +K R +V Q + + IY + + +L+F G + Sbjct: 186 AGANILCNLSASNEIISKANYRRNLVKYQSAKCYAGYIYASAGPTESSSDLVFSGHNLIC 245 Query: 224 DGQQQLA---------------------FQMKHFSEQNF---MTEWHYDQQLSQWNYMSD 259 + L K + F T + + + Sbjct: 246 ENGAILNETKTDKIIYGQIDLDHLNHDRLHYKTSMQDLFHVNYTTVDFASKPIHEIEFNR 305 Query: 260 DSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 + ++P + + L + K + V+IG+SGG+DS L + Sbjct: 306 YIDAYPFVPNNQDERITRCLEILHIQAQGLATRLSKIHCKDVVIGISGGLDSTLALLVCH 365 Query: 314 DALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 +A N + I +P T+ ++ +A L + + I D VN F + Sbjct: 366 EAFKINNYDSKGIHAITMPGFGTTKRTKSNAQILMDLLHVSSEEISIVDGVNQHFKDIHH 425 Query: 369 FLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNP 428 E I EN Q+R R ILM LSN A+++ T + SE+++G+ T GD + Sbjct: 426 --DPEVHNITYENSQARERTQILMDLSNAYNAIVVGTGDLSELALGWCTYNGDHMSMYAV 483 Query: 429 LKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQE 481 + KT V + + + + I + S EL P Q +E Sbjct: 484 NASVPKTLVRYIVE------SVALKDEVLHDVLMDICDTPVSPELLPPDKNGKIAQKTEE 537 Query: 482 SLPPYPILDDIIKRIVENEE-----------SFINNDQEYNDETVRYVEHLLYGSEYKRR 530 L Y + D + +++ + + +F + ++E + + + + ++KR Sbjct: 538 VLGSYDLHDFFLYQMLRHHDEPKKIYDLACVAFKDVEKETIKKAIITFYNRFFTQQFKRN 597 Query: 531 QAPVGTKITAKSFGR--DRLYPIS---NKFRDHISE 561 P G K+ + F D P N + + E Sbjct: 598 CMPDGVKVGSICFSPRGDWRMPSDASRNLWTKQVEE 633 >gi|315925767|ref|ZP_07921974.1| NAD synthetase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620876|gb|EFV00850.1| NAD synthetase [Pseudoramibacter alactolyticus ATCC 23263] Length = 648 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 129/638 (20%), Positives = 237/638 (37%), Gaps = 88/638 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D A N A EEA G+ ++LF EL ++GY DL + + + Sbjct: 14 VRTALAIPEIRVADPAANTAAMMALGEEAAAAGVGILLFPELAVTGYTCGDLFAQSALLA 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + L + +VVG P + N V ++ G I+ K +PN EF+ Sbjct: 74 GAEAGLAALAEWSQAAKMLVVVGAPIPVGSALYNCGVAINRGRILGSVPKTYIPNTHEFY 133 Query: 125 EKRTFIS------------GYSNDP---IVFRDI-----RLGILICEDIWKNSNICKHLK 164 EKR F + G + ++F D +G+ ICED+W + L Sbjct: 134 EKRWFAASRQLQEDRVTHAGQTFPIGADLLFSDWDDANVTVGLEICEDLWAPAPPSGELA 193 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + + +AS K + R +V Q + + +Y + G+ +L+F G Sbjct: 194 AAGATLVLNPSASNELTGKSEYRKNLVVQQSARCNAAYLYASCGIGESTTDLVFGGEGLI 253 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD---------------------------QQLSQWN 255 + + + Q + F + + D + Sbjct: 254 VE-KGTVLAQTERFMREGRLIAADVDVEALVHDRRMQSSFADAGPAEPHRRVAFCCQEAK 312 Query: 256 YMSDDSASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P E + + L + +++G+SGG+DS L Sbjct: 313 DWRRPVNPAPFVPADSAKRTARCEEIFAIQSVGLMSRLHHIGDVPMVLGISGGLDSTLAL 372 Query: 310 AIAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + DA + + + +P T+ ++ ++A A + LG + + I + Sbjct: 373 LVCADACDRLGLPHSAIHAVTMPGFGTTDRTYDNAVALIRGLGATFHEIGISRAAADHLA 432 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + L + EN Q+R R ILM L+N +++ T + SE+++G+ T GD Sbjct: 433 DIGHDLA--VHDVTYENAQARERTQILMDLANQVGGIVVGTGDLSELALGWATYNGDHMS 490 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQ 477 + + KT V L ++ +G+ I +L+ S EL P Q Sbjct: 491 MYAVNAGVPKTLVRYLVAYVADQARFAGIWQ----ILTDVLDTPVSPELLPPDESGKIAQ 546 Query: 478 TDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYN----DETVRYVEHLLYGS 525 ++ + PY + D + +V N + Y+ + +R + Sbjct: 547 KTEDLVGPYALHDFFLYHVVRNGFSPKKVDRLARAAFAGTYDAVVIRKWLRRFYRRFFAQ 606 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 ++KR P G K+ + D P K I+E Sbjct: 607 QFKRSCLPDGPKVGTVALSPRGDWRMPSDAKASLWIAE 644 >gi|15895058|ref|NP_348407.1| NAD synthetase [Clostridium acetobutylicum ATCC 824] gi|15024753|gb|AAK79747.1|AE007687_4 NH(3)-dependent NAD(+) synthase (nadE) fused to amidohydrolase domain [Clostridium acetobutylicum ATCC 824] gi|325509196|gb|ADZ20832.1| NAD synthetase [Clostridium acetobutylicum EA 2018] Length = 642 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 138/641 (21%), Positives = 247/641 (38%), Gaps = 95/641 (14%) Query: 2 LKK----LKIAIAQLNPVVGDIAGNIAKARRAREEA-NRQGMDLILFTELFISGYPPEDL 56 +KK +++ +A V + N+ ++A R + +++F EL ++GY DL Sbjct: 3 MKKDFGYIRVGVASCELKVANPNYNVKSIISIMKKAYRRHHIKVLVFPELCVTGYTCGDL 62 Query: 57 VFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKIN 116 + I+ + ++ L T + VG P + + N VI++ GNI+ V K Sbjct: 63 FNQNLLIKRAENELNNLLVSTSNINMITAVGMPVKADNQLFNCAVIINNGNILGVVPKTF 122 Query: 117 LPNYSEFHEKRTFISGYS---------------NDPIVFRDI----RLGILICEDIWKNS 157 +P Y+EF+EKR F S + ++F+DI +GI ICED+W N Sbjct: 123 IPTYNEFYEKRNFAGAISRISDEIILCGKKVPFGENLLFKDIYSELCIGIDICEDLWVNI 182 Query: 158 NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELI 215 + GA + +L+AS K R ++V Q + Y + + +L+ Sbjct: 183 PPSSYHTLNGANLILNLSASDEIVAKSDYRRDLVRLQSAKCITSYAYASSGQTESTSDLV 242 Query: 216 FDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD---------QQLSQWNYMSDDSASTMY 266 F G S D L + F E +++ D + + + D T+ Sbjct: 243 FSGHSIIADNGSIL--KDIKFEEASYVKYADVDIEKLISDRIKFNTYMGRIEDKEYRTIN 300 Query: 267 IPLQEEEADYNA--------------------------CVLSLRDYVQKNNFHKVIIGLS 300 L E + L + K +K ++G+S Sbjct: 301 FHLGYNENMHLERYVEASPFVPSNKSKRNIRCREILDLQASGLYQRLNKTGINKAVVGIS 360 Query: 301 GGIDSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS L + V+A K +N+ I +P T+ ++ +A K LG + I Sbjct: 361 GGLDSTLALLVIVEAFKKLKAPMKNIIGITMPGFGTTRRTYNNAVELMKKLGITIKEISI 420 Query: 356 HDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 F+ + Q L + EN Q+R R ILM ++N A+++ T + SE+++G+ Sbjct: 421 KKACIQHFNDIGQDLNT--HDTIYENSQARERTQILMDIANKEGAIVVGTGDLSELALGW 478 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD + + KT V L W + + I I S EL P Sbjct: 479 CTYNGDQMSMYGVNSSIPKTLVKYLIMWYAEASKDNDI----RNILLDIYNTPVSPELLP 534 Query: 476 H-------QTDQESLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETV----R 516 Q ++ + Y + D + ++ + + I +Y+++ + + Sbjct: 535 PDKEGNIKQKTEDLIGSYELNDFFLYNMLRSGYEPLKILYLANIAFKDKYSEDVIHSALK 594 Query: 517 YVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 + ++KR P G KI + S D P + Sbjct: 595 NFYKRFFTQQFKRNCMPDGVKIGSVSLSPRGDLRMPSDASY 635 >gi|319956656|ref|YP_004167919.1| nh(3)-dependent nad(+) synthetase [Nitratifractor salsuginis DSM 16511] gi|319419060|gb|ADV46170.1| NH(3)-dependent NAD(+) synthetase [Nitratifractor salsuginis DSM 16511] Length = 633 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 131/626 (20%), Positives = 240/626 (38%), Gaps = 87/626 (13%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +I A +G+ A N+ + R +A+ + + ++F EL ++GY DL F++ +A Sbjct: 6 RIGAAVPKLHLGNPARNVREILRLYRQASNERITAVVFPELCLTGYTLADLFFQERLYRA 65 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + A++ L + D VG + + + N ++ G I+ + K +P+ EF+E Sbjct: 66 QNEALEWLLEQSRDFDTLAAVGMMLRVDDRLYNVAAVIQRGEILGIIPKSYIPDKREFYE 125 Query: 126 KRTFISGYS---------------NDPIVFRD---IRLGILICEDIWKNSNICKHLKKQG 167 KR F SG ++FRD R+G+ ICED+W + L G Sbjct: 126 KRQFDSGREIVGETVTLFGREVPFGVDLIFRDEGEFRMGVEICEDLWALTPPSNLLAASG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A + +L+AS K R E+V Q + + Y + G+ + +F G S + Sbjct: 186 ANLILNLSASNELAGKADYRAELVRTQSARLVCVYAYASSGPGESSTDTVFGGDSMIAEY 245 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQL---------------------------SQWNYMS 258 L + + F ++ + D + + + + Sbjct: 246 -GSLLARGERFRFESQLIAADVDLRKLTGLREAETGYCDAPRRKMRRINVAPLPRPDALR 304 Query: 259 DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 ++P E +L +++ + ++G+SGG+DS L Sbjct: 305 RPIDPHPFVPGNPADRNRRCEEISAIQAHALIRRMKQARIRRAVLGISGGLDSTLALLAT 364 Query: 313 VDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 A + + +P T+ ++ +A + LG + +PI L F + Sbjct: 365 WKAFQIMERDPSEILAVTMPGFGTTGRTYANAVKLCQTLGVELREVPIQKLALAEFEAIG 424 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 E + EN+Q+R R ILM L+N +++ T + SEI++G+ T GD + Sbjct: 425 H--DPETHDVTYENVQARARTEILMNLANKEHGLVVGTGDLSEIALGFSTYNGDHMSMYA 482 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L + + P + IL S EL P Q +E Sbjct: 483 LNSGIPKTLVRYLVEYYAR------IHPELSDVLGDILSTPVSPELLPAEEGQIAQKTEE 536 Query: 482 SLPPYPILDDIIKRIVENE--------ESFINNDQEYNDETVRYVEHL----LYGSEYKR 529 + PY + D + ++ + + D Y++ T+R L + ++KR Sbjct: 537 IVGPYELHDFFLYHFIKYGAEPAKILYLATLAFDGRYDEATIRKWLRLFLRRFFTQQFKR 596 Query: 530 RQAPVGTKITAKSFGR--DRLYPISN 553 P G K+ S D P Sbjct: 597 SCMPDGPKVGTISLSPRADWRMPSDA 622 >gi|254417780|ref|ZP_05031504.1| hydrolase, carbon-nitrogen family [Brevundimonas sp. BAL3] gi|196183957|gb|EDX78933.1| hydrolase, carbon-nitrogen family [Brevundimonas sp. BAL3] Length = 681 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 138/662 (20%), Positives = 244/662 (36%), Gaps = 109/662 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A VGD N + +A QG+DL++F EL +S Y +DL + + + Sbjct: 16 VRVAAATPVSHVGDPKANAEEHLALIRQAADQGVDLMVFPELSLSAYAIDDLHMQAALLD 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I + T + VVG P ++ + + N V++ AG ++ V K LPNY E++ Sbjct: 76 EVERQIAVIAQATGEHDLVAVVGAPIRNGDALYNCAVVMGAGEVLGVVPKTYLPNYREYY 135 Query: 125 EKRT--------------------FISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 EKR F G + + + ICED W Sbjct: 136 EKRWFAPATARAEDVIRLNGETVDFAPGLVFEAVNRPGFVFAVEICEDYWAPLPPSTRAA 195 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K +R + + ++ G+ +L +DG + Sbjct: 196 LAGARILLNLSASNIVIGKADERAMLSASHSARTLSAYVFTASGWGESTTDLAWDGQATI 255 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS--------------------- 261 + +L + + F+ +N +T D + + + + Sbjct: 256 HELGSKL-AEGERFALENHLTLADVDVDRIGLDRLRNGTFSECARVEGEPATVVPFMARE 314 Query: 262 -----------ASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 ++P Q+ +N V L + N +++IG+SGG+D Sbjct: 315 DVVESELIRPLDRFPFVPDEAGRLDQDCYEAFNIQVQGLMRRMTATNGERLVIGVSGGLD 374 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S +A A + N+ +P TS + +A A KALG + I Sbjct: 375 STQALLVACRAFDRLNLPRTNILGFTMPGFATSDGTKSNAWALMKALGVTGAEIDIRPAA 434 Query: 360 NHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 F + E I EN+Q+ +R + L L+N ++A +L T + SE+++G+ T Sbjct: 435 EQMFKDIGHPYAAGEPVHDITFENVQAGLRTDYLFRLANQNRAFVLGTGDLSELALGWAT 494 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD +N + KT + L W + G +IL S EL P Sbjct: 495 YGVGDHMSHYNVNGGVAKTLIRHLIRWVADRELV---GAEASPTLHAILNTEISPELVPA 551 Query: 477 -----QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ------------------ 508 Q+ + ++ PY + D + I ++ +F+ + Sbjct: 552 KDGVIQSTEGTVGPYALNDFFLFYISRFGLKPSKVAFLAHQAWSDAGAGHWPANTPENER 611 Query: 509 -EYNDETVRYV-----EHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNKFRDHI 559 EY+ T++ +++KR P G K+ + S D P R + Sbjct: 612 VEYDLATIKAWLRKFLIRFFQTAQFKRSALPNGPKVVTGGSLSPRGDWRAPSDGNARVWL 671 Query: 560 SE 561 E Sbjct: 672 DE 673 >gi|163816125|ref|ZP_02207493.1| hypothetical protein COPEUT_02309 [Coprococcus eutactus ATCC 27759] gi|158448545|gb|EDP25540.1| hypothetical protein COPEUT_02309 [Coprococcus eutactus ATCC 27759] Length = 677 Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 137/669 (20%), Positives = 250/669 (37%), Gaps = 116/669 (17%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L++A +G ++GN+ + EE D+I+ EL I+GY DL + Sbjct: 15 MKNMLRVAAVTPKVHIGSVSGNVREIMDIYEEYKDA-ADIIVTPELSITGYTCADLFENR 73 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I + L T G + +VVG P + + N L G ++A+ K LPNY Sbjct: 74 KLIDGARRGLLQLAMATCTGQSALVVGLPFEVDGELFNCAAFLQGGRVMAIVPKTYLPNY 133 Query: 121 SEFHEKRTFIS--------------------------------GYSNDPIVFRDI----- 143 EF+EKR F + G ++ + ++ Sbjct: 134 GEFYEKRWFSARKYDAVMVNLMDPEDDGDELEYNAGSKKAGGRGVGSEVLFGNNVMIEMG 193 Query: 144 ------RLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 +LGI ICED W + + L GAE + +L+AS K RH+++ S Sbjct: 194 SGDQRVKLGIEICEDAWTPVSPGRLLAMAGAEVILNLSASNEVIGKAAYRHKLIGSVSSD 253 Query: 198 VHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY-------- 247 +YV+ + +L+F G + ++ +L ++K F + + + Sbjct: 254 CLCGYVYVSAGMYESTSDLVFSGHNLMYEN-GKLLGEVKPFEDGVLIRDISLTKIRHDRI 312 Query: 248 ----------DQQLSQWNYMSDDSAST------------MYIPLQEEEADYNA----CVL 281 D ++ + D+ ++P + A V Sbjct: 313 ANKSFADCKRDFAFRKYETVVCDTPLMDKGNVLMKVKMTPFVPSGNKLERCMAIFKMQVA 372 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN-----VQTIMLPYKYTSPQSL 336 L+ ++ + V++G+SGG+DS L ++ A+ V I +P T+ ++ Sbjct: 373 GLQRRIEATHCKCVVVGVSGGLDSTLALLVSAQAVKNAGLPSTTVVGITMPGFGTTNRTK 432 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 ++ + LGC + I V F+ + Q E + EN Q+R R ILM ++N Sbjct: 433 NNSTELMRLLGCDSREISIAASVRQHFADIGQ--DESVHDVTYENCQARERTQILMDVAN 490 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++ T + SE+++G+ T GD + + KT V L + G + Sbjct: 491 KEGGFVVGTGDLSELALGWCTYNGDHMSMYAVNTSIPKTLVRSLVNEVGHFMEVDGFAGI 550 Query: 457 T--------EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ 508 + P +L P+ + Q ++++ Y + D + + S ++ Sbjct: 551 APIIDDIIDTPVSPELL--PPNPDGTIAQKTEDTVGSYILHDFFLYYTLRYGMSPEEVNE 608 Query: 509 ----------EYN------DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYP 550 EYN D+ + + ++KR P G K+ S D P Sbjct: 609 LCKEAVRQSDEYNFSDSEIDKWQKVFYTRFFRQQFKRNCMPDGVKVGTVSVSPRGDLRLP 668 Query: 551 ISNKFRDHI 559 +F D + Sbjct: 669 SEIEFEDFL 677 >gi|154507772|ref|ZP_02043414.1| hypothetical protein ACTODO_00254 [Actinomyces odontolyticus ATCC 17982] gi|153797406|gb|EDN79826.1| hypothetical protein ACTODO_00254 [Actinomyces odontolyticus ATCC 17982] Length = 693 Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 138/675 (20%), Positives = 250/675 (37%), Gaps = 123/675 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L N + A E + +G+ + +F EL +SGY +DL + + + Sbjct: 13 RVAAVTLPVHPARPFENAREIIDAARELDARGVAMGVFPELCVSGYAIDDLFLQDALLDN 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ + + D +VVG P + + N V + G ++A+ K +LPNY EF+E Sbjct: 73 VEKALAQIVEASADLLPLLVVGAPLRKDNALYNCAVAIHRGRVLAIVPKSHLPNYREFYE 132 Query: 126 KRTFIS-----------------GYSNDPIV------------FRDIRLGILICEDIWKN 156 KR F++ +S P+ + +GI ICED+W Sbjct: 133 KRHFVTMPPRACERIEVPWGGIEEFSGGPVWVPFGQVLLSADDVPGLTIGIEICEDMWVP 192 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--EL 214 L GA L +L+ASP + R +V + +Y G+ +L Sbjct: 193 VTPATELALAGATVLANLSASPITVGRGADRELMVRSVSARCSAAYVYTAAGMGESSTDL 252 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS------------- 261 +DG + ++ +LA + F E +T D + + +S Sbjct: 253 AWDGEAMIYEAGDRLAI-GERFQEGAHITIADVDLERLRTERKRQNSFTDNAQRYFAGDE 311 Query: 262 ------------------------ASTMYIPL------QEEEADYNACVLSLRDYVQKNN 291 ++P Q+ YN V L ++ Sbjct: 312 RMAPQEVEFTLDPPRTNLGLERPVNRFPFVPNDPTRLEQDCYEAYNIQVAGLVQRLRAIG 371 Query: 292 FHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 K++IG+SGG+DS +A A+ + ++ LP TS ++ ++A + L Sbjct: 372 NPKIVIGVSGGLDSTHALVVASRAMDLLGRPRTDILCYTLPGFATSERTKKNATLLCQYL 431 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLT 404 G + + I + + E + + EN+Q+ +R + L L+NH ++L Sbjct: 432 GTSFQEIDIRPAATQMLADIGHPYGEGEATYDVTFENVQAGLRTDYLFRLANHLGGIVLG 491 Query: 405 TSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T + SE+++G+ T GD + + KT + L W + + EV+ S Sbjct: 492 TGDLSELALGWCTYGVGDQMSHYAVNTGVPKTLMQHLIRWVVASKQFDDH--VGEVLL-S 548 Query: 464 ILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ---- 508 IL S EL P Q+ Q+ + PY + D + ++ + +F+ Sbjct: 549 ILHTEISPELVPAKPGEKMQSTQDKIGPYNLQDFTLYHVLRRGARPSKIAFLAEKAWSDA 608 Query: 509 -------EYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRD 546 + +E R + ++KR P G K+ + S D Sbjct: 609 SVGSWPVGFPEEDKVAYSLEEIVKWERLFLWRFFSQQFKRSALPNGPKVMAGGSLSPRGD 668 Query: 547 RLYPISNKFRDHISE 561 P D ++E Sbjct: 669 WRMPSDVSGADWVAE 683 >gi|113866776|ref|YP_725265.1| NAD synthetase [Ralstonia eutropha H16] gi|113525552|emb|CAJ91897.1| NAD synthase [Ralstonia eutropha H16] Length = 682 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 138/659 (20%), Positives = 248/659 (37%), Gaps = 114/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N A+ +A ++G L+ F EL IS Y +DL +++ + A Sbjct: 15 RVAVGVPVCRVADPAFNAAETIALAAQAAQKGAVLVAFPELGISAYTCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +A+ T+ + A ++VG P + + + N V++ G I V K LPNY EF+E Sbjct: 75 CEAALATIVEASRKLPAALIVGMPLRVEHQLFNCAVVVARGRIQGVVPKSYLPNYWEFYE 134 Query: 126 KRTFI--------------------SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 R F +G D D R ICED+W Sbjct: 135 ARQFSAADNAAVESIRLLGQDVPFGAGLLFDVEDIPDFRFHAEICEDVWVPIPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V+ Q + +Y + G+ +L +DG + Sbjct: 195 AGATVLVNLSASNIVVGKAGYRHQLVSQQSARCLAAYLYTSAGKGESSTDLAWDGQALIC 254 Query: 224 DGQQQLAFQMKHFSE--QNFMTEWHYDQQLSQWNYM------------------------ 257 + +L + + F++ + ++ + + Sbjct: 255 EN-GELLAESERFADTSHLLCADIDVERLSRERMHQVTFGHSVRRHKAEVDKFRVVRFPL 313 Query: 258 ----------SDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + + A Y+P YN V +L + + KV+IG+SG Sbjct: 314 DLTLEKSLPLARNVARFPYVPADPRQRDERCMEVYNIQVQALVQRLSASKISKVVIGVSG 373 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + A+ + N+ +P TS ++L A + +GC + I Sbjct: 374 GLDSTHALLVCAKAMDRLGLPRANILAFTMPGFATSDRTLLQARQLMQVVGCTATEIDIR 433 Query: 357 DLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E+ + EN+Q+ R N L L+N A+++ T + SE+++G Sbjct: 434 PSCLAMLKDLGHPYAAGEKVYDVTFENVQAGERTNHLFRLANFHHAIVIGTGDLSELALG 493 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W G G + ++L+ S EL Sbjct: 494 WCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQV---GEGGSDVLLAVLDTDISPEL 550 Query: 474 RPH-------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYNDE-------- 513 P Q + ++ PY + D + + ++ +F+ + E Sbjct: 551 VPGDSNHGPEQKTESTIGPYELQDFNLYYTLRFGFTPSKIAFLALHAWGDRERGVWPNGP 610 Query: 514 -TVR--------------YVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 VR +++ S++KR P K+ + S D P ++ Sbjct: 611 HVVRNQYGLPEIKRNLAIFLDRFFRTSQFKRSCIPNAPKVGSGGSLSPRGDWRAPSDSE 669 >gi|170692828|ref|ZP_02883990.1| NAD synthase [Burkholderia graminis C4D1M] gi|170142484|gb|EDT10650.1| NAD synthase [Burkholderia graminis C4D1M] Length = 682 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 136/659 (20%), Positives = 248/659 (37%), Gaps = 114/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A V D N + R EA ++ L++F EL IS Y +DL +++ + A Sbjct: 15 RVAVAVPVCRVADPQFNAQETLRLAREAAQKCALLVVFPELGISAYTCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +AI + + + + A +V+G P + + + N +++ G + V K LPNY EF+E Sbjct: 75 CEAAIGDIVAASTNIPAVLVIGAPLKIEHKLFNCALVISNGKLCGVVPKSYLPNYGEFYE 134 Query: 126 KRTFISGY--SNDPIVFRD------------------IRLGILICEDIWKNSNICKHLKK 165 R F + S+ ++ R I ICED+W Sbjct: 135 ARQFSAAENASSTEVMLCGQQAPFSASLLFDVPGAPLFRFHIEICEDVWVPVPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V Q + +Y + G+ +L +DG + + Sbjct: 195 AGATVLVNLSASNIVIGKSGYRHQLVGQQSARCLSAYLYSSAGRGESTTDLAWDGQALIY 254 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + +L + + F + + + D + M + Sbjct: 255 EN-GELLAESERFLDTSHIIFGDVDLERLSRERMRQTTFGQSTRRHADEVRKFQVVSVPA 313 Query: 262 --------------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 Y+P YN V L + N KV+IG+SG Sbjct: 314 SLPDAEHLPLMRAINRFPYVPSNPATRDERCAEVYNIQVQGLLQRLGAANISKVVIGVSG 373 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + A+ + ++ +P TS ++L+ A +A+GC + I Sbjct: 374 GLDSTQALLVCAKAMDRLKLPRSHILGYTMPGFATSSRTLQQAKDLMQAVGCSMQEIDIR 433 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 ++ EE + EN+Q+ R + L L+N A+++ T + SE+++G Sbjct: 434 PSCMQMLKDLNHPFATGEEQYDVTFENVQAGERTSHLFRLANFHHAIVIGTGDLSELALG 493 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD ++ + KT + L W G G + IL S EL Sbjct: 494 WCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESGQV---GDAGSRVLEQILATEISPEL 550 Query: 474 RPH-------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYNDETVRY---- 517 P Q + ++ PY + D + ++ ++ +F++ + E + Sbjct: 551 VPGKVEKVIDQKTESTIGPYELQDFNLYYLLRFGFAPSKVAFLSQSAWADREHGVWPAGR 610 Query: 518 -------------------VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 E + S++KR P K+ + S D P ++ Sbjct: 611 NVARNQYTLADIKRNLAIFAERFFHTSQFKRSCIPNAPKVGSGGSLSPRGDWRAPSDSE 669 >gi|295093434|emb|CBK82525.1| NH(3)-dependent NAD(+) synthetase [Coprococcus sp. ART55/1] Length = 663 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 138/669 (20%), Positives = 248/669 (37%), Gaps = 116/669 (17%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M L++A +G ++GN+ + EE D+I+ EL I+GY DL + Sbjct: 1 MKNMLRVAAVTPKVHIGSVSGNVREIMDIYEEYKDA-ADVIVTPELSITGYTCADLFENR 59 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 I + L T G + +VVG P + + N L G ++A+ K LPNY Sbjct: 60 KLIDGARRGLLQLAMATCTGQSALVVGLPFEVDGELFNCAAFLQGGRVVAIVPKTYLPNY 119 Query: 121 SEFHEKRTFI-------------SGYSNDPIVF--------------------------- 140 EF+EKR F D + + Sbjct: 120 GEFYEKRWFSARKYDAVMVNLMDPEDDGDELEYNAGSKKAGDRAVGSEVLFGNNVMIEMG 179 Query: 141 ---RDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISH 197 + ++LGI ICED W + + L GAE + +L+AS K RH+++ S Sbjct: 180 SGDQRVKLGIEICEDAWTPVSPGRLLAMAGAEVILNLSASNEVIGKAAYRHKLIGSVSSD 239 Query: 198 VHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY-------- 247 +YV+ + +L+F G + ++ +L ++K F + + + Sbjct: 240 CLCGYVYVSAGMYESTSDLVFSGHNLMYEN-GKLLGEVKPFEDGVLIRDISLTKIRHDRI 298 Query: 248 ----------DQQLSQWNYMSDDSAST------------MYIPLQEEEADYNA----CVL 281 D ++ + D+ ++P + A V Sbjct: 299 ANKSFADCKRDFAFRKYETVVCDTPLMDKGNVLMKVKMTPFVPSGNKLERCMAIFKMQVA 358 Query: 282 SLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKEN-----VQTIMLPYKYTSPQSL 336 L+ ++ + V++G+SGG+DS L ++ A+ V I +P T+ ++ Sbjct: 359 GLQRRIEATHCKCVVVGVSGGLDSTLALLVSAQAVKNAGLPSTTVVGITMPGFGTTNRTK 418 Query: 337 EDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSN 396 ++ + LGC + I V F+ + Q E I EN Q+R R ILM ++N Sbjct: 419 NNSTELMRLLGCDSREISIAASVRQHFADIGQ--DESVHDITYENCQARERTQILMDVAN 476 Query: 397 HSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPL 456 ++ T + SE+++G+ T GD + + KT V L + G + Sbjct: 477 KEGGFVVGTGDLSELALGWCTYNGDHMSMYAVNTSIPKTLVRSLVNEVGHFMEVDGFAGI 536 Query: 457 T--------EVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFINNDQ 508 + P +L P+ + Q ++++ Y + D + + S ++ Sbjct: 537 APIIDDIIDTPVSPELL--PPNPDGTIAQKTEDTVGSYILHDFFLYYTLRYGMSPEEVNE 594 Query: 509 ----------EYN------DETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYP 550 EYN D+ + + ++KR P G K+ S D P Sbjct: 595 LCKEAVRQSDEYNFSDSEIDKWQKVFYTRFFRQQFKRNCMPDGVKVGTVSVSPRGDLRLP 654 Query: 551 ISNKFRDHI 559 +F D + Sbjct: 655 SEIEFEDFL 663 >gi|114704940|ref|ZP_01437848.1| NAD synthetase [Fulvimarina pelagi HTCC2506] gi|114539725|gb|EAU42845.1| NAD synthetase [Fulvimarina pelagi HTCC2506] Length = 692 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 141/666 (21%), Positives = 241/666 (36%), Gaps = 113/666 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+A D A N + EA+ G DL+++ EL +SGY +DL + + + Sbjct: 22 VRVAVATPTVRNADPAFNATAIQAQAREASEAGADLVVYPELCLSGYANDDLHLQAALVA 81 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + I +L T + G ++VG + + N+ V + G I+ V K LPNY E++ Sbjct: 82 RTAQEIASLAEATRELGPLLLVGAIVERSGSLYNTAVAIHRGTILGVVPKTYLPNYREYY 141 Query: 125 EKRTFIS--GYSNDPIVFRDI------------------RLGILICEDIWKNSNICKHLK 164 EKR F S G I + + ICED W S Sbjct: 142 EKRWFASGAGTEGQTIALAGTSVPFGPDLLFAAENMPSFTVHVEICEDYWSPSPPSIDGA 201 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 G L +L+AS K ++RH + Q IY G+ +L +DG Sbjct: 202 LAGGTILCNLSASNITIGKSRERHLLSASQSMRCLAAYIYSAAGHGESTTDLAWDGQGGI 261 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL------------- 269 ++ L + FS +N + D + + + + Sbjct: 262 YEL-GDLMAESARFSHENALVYSDIDTGRIRQERLRMPTFHDAAVQRGKPESRFRRIAFE 320 Query: 270 ----------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 Q+ +N V L + ++IG+SG Sbjct: 321 HRPGVAVTDLKRPVRRFPFVPNDAEKLDQDCYEAFNIQVEGLITRYKATPGEMMVIGISG 380 Query: 302 GIDSALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A +E + +P T + +A A +A+G + + I Sbjct: 381 GLDSTHALIVAAKACDRMGVSREKILAFTMPGFATGDSTKSNAWALMRAIGVTAEEIDIR 440 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 F+ M E I EN+Q+ +R + L L+N ++ T + SE+++G Sbjct: 441 PAARQLFADMGHPFSDGEPVYDITFENVQAGLRTDYLFRLANQRGGFVIGTGDLSELALG 500 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD + + KT + L W S G P T+ + +IL+ S EL Sbjct: 501 WCTYGVGDQMSHYAVNTGVPKTLIQYLIRWCVSSG---QFDPETDTVLNAILDTEISPEL 557 Query: 474 RPH------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ-------------- 508 P Q+ +E + PY + D + + ++ +F+ Sbjct: 558 VPPDAAGGLQSTEEKIGPYELNDFFLFHTLRYGLPPSKVAFLAYHAWRSTSEGRWPIGFP 617 Query: 509 -----EYNDETVRYVE-----HLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISNKF 555 Y+ ET+ S++KR P G K++A S D P + Sbjct: 618 EAKKNAYDLETIADWLEKFLFRFFQTSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDGRA 677 Query: 556 RDHISE 561 +SE Sbjct: 678 DLWLSE 683 >gi|194288870|ref|YP_002004777.1| nad synthetase [Cupriavidus taiwanensis LMG 19424] gi|193222705|emb|CAQ68708.1| Glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) [Cupriavidus taiwanensis LMG 19424] Length = 708 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 136/659 (20%), Positives = 246/659 (37%), Gaps = 114/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N + +A ++G L+ F EL +S Y +DL +++ + A Sbjct: 41 RVAVGVPVCRVADPAFNANETIALATQAAQRGAVLVAFPELGLSAYTCDDLFHQRALLDA 100 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +A+ T+ + +VVG P + + + N V++ G I V K LPNY EF+E Sbjct: 101 CQAALATIVEASRKLPVALVVGMPLRVEHQLFNCAVVVARGRIQGVVPKTYLPNYWEFYE 160 Query: 126 KRTFI--------------------SGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 R F +G D D R ICED+W Sbjct: 161 ARQFSAADNAAVDSIELLGQQVPFGAGLLFDIEDIPDFRFHAEICEDVWVPIPPSSFAAL 220 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V+ Q + +Y + G+ +L +DG + Sbjct: 221 AGATVLVNLSASNIVVGKSGYRHQLVSQQSARCLAAYLYTSAGKGESSTDLAWDGQALIC 280 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM-------------------------- 257 + +L + + F++ + + D + M Sbjct: 281 EN-GELLAESERFADTSHLLFADIDVERLSRERMHQVTFGHSVRRHKAEVDQFRVVRFPL 339 Query: 258 ----------SDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + A Y+P YN V +L + + KV+IG+SG Sbjct: 340 DLTLEKSLPLERNVARFPYVPADPRQRDERCMEVYNIQVQALVQRLSASKISKVVIGVSG 399 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + A+ + N+ +P TS ++L+ A + +GC + I Sbjct: 400 GLDSTHALLVCAKAMDRLGLPRANILAYTMPGFATSGRTLQQARQLMQVVGCTATEIDIR 459 Query: 357 DLVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E+ + EN+Q+ R N L L+N++ A+++ T + SE+++G Sbjct: 460 PSCLAMLKDLGHPYAAGEKVYDVTFENVQAGERTNHLFRLANYNHAIVIGTGDLSELALG 519 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W G G + ++L+ S EL Sbjct: 520 WCTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQV---GAGGSDVLLAVLDTDISPEL 576 Query: 474 RPH-------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYNDETVRY---- 517 P Q + ++ PY + D + + ++ +F+ + E + Sbjct: 577 VPGDSNHGPEQKTESTIGPYELQDFNLYYTLRFGFTPSKIAFLALHAWGDRERGIWPNGP 636 Query: 518 -------------------VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 ++ S++KR P K+ + S D P ++ Sbjct: 637 HVARNQYGLPDIKRNLAIFLDRFFRTSQFKRSCVPNAPKVGSGGSLSPRGDWRAPSDSE 695 >gi|303232742|ref|ZP_07319427.1| NAD+ synthase [Atopobium vaginae PB189-T1-4] gi|302481228|gb|EFL44303.1| NAD+ synthase [Atopobium vaginae PB189-T1-4] Length = 650 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 118/628 (18%), Positives = 220/628 (35%), Gaps = 88/628 (14%) Query: 12 LNPVVGDIAGNIAKARRAREEANR-QGMDLILFTELFISGYPPEDLVFKKSFIQACSSAI 70 + D+ NI +A +I+ EL +SGY D+ + + + +C + Sbjct: 13 PHIEPCDVTANIDAIIADVTQAYEYDSARVIVLPELCVSGYSCGDMFLQAALLGSCEEGL 72 Query: 71 DTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFI 130 T A I +G P + N ++ G+I+ + K +P Y EF+E R F Sbjct: 73 QHFLEQTAHIDALIALGCPVSYHSKLYNCAIVAHKGSILGIVPKRAIPTYDEFYELRHFS 132 Query: 131 SGYSNDP-IVFRD-------------------IRLGILICEDIWKNSNICKHLKKQGAEF 170 G+ I F +R+ + ICED+W + + GA Sbjct: 133 RGFDTPVYIDFAGKTHIPFGIRQIFSCTSMPLLRVAVEICEDVWVANPPSSDHVRAGATL 192 Query: 171 LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQ 228 + +L+A+P NK + R ++ Q + +Y + +++F + + Sbjct: 193 ILNLSATPAQINKSRYRRSLIAQQSARCICGYVYACAPWSESTQDVVFSAHNMVAEN-GT 251 Query: 229 LAFQMKHFSEQNFMTEWHY---------------------------------DQQLSQWN 255 + + FSE T+ + + Q Sbjct: 252 ILAESSGFSETPITTQIDLTSLDVQRRRTSTFEVFDPHMTNAPQYAYQQFELELEPCQLT 311 Query: 256 YMSDDSASTMYIPLQEEEADYNACVL---SLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 D + P + + L + + +++GLSGG+DS L + Sbjct: 312 RFIDPHPFVPHDPSERAHRCEEILSIQAHGLAKRMLHTHAQTLVLGLSGGLDSTLALLVC 371 Query: 313 VDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V A + + +P T+ ++ +AA A ALG + I V F+ + Sbjct: 372 VRACACIDVSPSAIIAVTMPGFGTTQRTHGNAAVLADALGATLREISIVAAVRQHFADIG 431 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 EE + EN Q+R R ILM ++N +++ T + SE ++G+ T D + Sbjct: 432 H--SEEDKDVTYENAQARERTQILMDIANQESGLVVGTGDLSEFALGWATYNADHMSMYA 489 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTD-------Q 480 + KT V + + + IL+ S EL P Q+D + Sbjct: 490 VNVGVPKTLVRYVVQYEADRAAAGADTNGVYDVLLDILDTPVSPELLPAQSDGTIAQKTE 549 Query: 481 ESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETV----RYVEHLLYGSEYK 528 + + PY + D + ++ + + Y+D T+ R + ++K Sbjct: 550 DLVGPYELHDFFLYYVLRKAAAPHVIYRLARHAFEGSYDDATILMWLRTFYRRFFSQQFK 609 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISNK 554 R G K+ + D P Sbjct: 610 RSCMCDGPKVGTVALSPRGDLRMPSDAH 637 >gi|302381441|ref|YP_003817264.1| nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Brevundimonas subvibrioides ATCC 15264] gi|302192069|gb|ADK99640.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Brevundimonas subvibrioides ATCC 15264] Length = 681 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 143/665 (21%), Positives = 246/665 (36%), Gaps = 113/665 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + D A N + +A QG DLI+F EL +SGY +DL + + + Sbjct: 16 VRVAAATPVVHIADPAANAEEHVALIRQAGAQGCDLIVFPELSLSGYAIDDLHMQAALLA 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L + G VVG P + + +LN+ V+L G + V K LPNY E++ Sbjct: 76 EVDRQIGHLARVAGEAGLVAVVGAPVRHGDRLLNTAVVLAGGEVTGVVPKTYLPNYREYY 135 Query: 125 EKRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLK 164 EKR F SG R +G+ ICED W Sbjct: 136 EKRWFSSGDDIGAETLRIGGQDSWVGTRLLFEADDRPGFVVGVEICEDFWAPVPPSTRQA 195 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K +R + + Q + ++ G+ +L +DG + Sbjct: 196 LAGARILLNLSASNIVIGKADERAMLCSSQSARTLSAYVFTASGWGESTTDLAWDGQATI 255 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQ------------------------LSQWNYMS 258 + +L + F+ ++ +T D + + + + Sbjct: 256 HELGAKL-ASGERFALESHLTVADIDIERIGQDRLRNGTFADCARRELDEEGYIRLGFRT 314 Query: 259 DDSAS----------TMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D+A ++P Q+ +N V L + ++ IG+SGG Sbjct: 315 RDAAPAGPLIRPLDRFPFVPDDPARLDQDCFEAFNIQVQGLMRRMTATGAERLCIGVSGG 374 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A + N+ +P TS + +A A ALG + I Sbjct: 375 LDSTQALLVACRAFDRLNLPRTNILGFTMPGFATSDGTKSNAWALMTALGVTGAEIDIRP 434 Query: 358 LVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + + I EN+Q+ +R + L L+N ++A +L T + SE+++G+ Sbjct: 435 AAERMLADIKHPYADGQPVHDITFENVQAGLRTDYLFRLANQNRAFVLGTGDLSELALGW 494 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W G + +IL+ S EL Sbjct: 495 ATYGVGDHMSHYNVNGGVAKTLIRHLIRWVADREPDGGAAD----VLYAILDTEISPELV 550 Query: 475 PH------QTDQESLPPYPILDDIIKRIVENEES-----FINNDQ--------------- 508 P Q+ + ++ PY + D + I S F+ + Sbjct: 551 PAGADGQIQSTEATVGPYALNDFFLFHITRYGMSPSKVAFLAHQAWGDAARGHWPANTPD 610 Query: 509 ----EYNDETV-----RYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNKFR 556 Y+ T+ +++ S++KR P G K+ + S D P R Sbjct: 611 AERVSYDLPTIKGWLRKFLVRFFQTSQFKRSALPNGPKVVTGGSLSPRGDWRAPSDGNAR 670 Query: 557 DHISE 561 + E Sbjct: 671 VWLDE 675 >gi|281358389|ref|ZP_06244871.1| NAD+ synthetase [Victivallis vadensis ATCC BAA-548] gi|281315216|gb|EFA99247.1| NAD+ synthetase [Victivallis vadensis ATCC BAA-548] Length = 633 Score = 421 bits (1084), Expect = e-115, Method: Composition-based stats. Identities = 128/632 (20%), Positives = 232/632 (36%), Gaps = 90/632 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A A V D+ N+++ EA + ++F EL ++GY DL F++ ++ Sbjct: 6 RLAAAVPVIRVADVEFNLSQMLECYREACVKQAAAVVFPELSVTGYSCGDLFFQERLLER 65 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 SA T G + GFP + EG+ N + G I + K LPNY EF+E Sbjct: 66 AESAAAGFAKATAGQGTVAIFGFPLKFGEGIYNVAAVAQNGMIRGLVPKSLLPNYREFYE 125 Query: 126 KRTFISGY---------SNDPIVF---------RDIRLGILICEDIWKNSNICKHLKKQG 167 KR F SG P+ F R R + +CED+W L G Sbjct: 126 KRHFRSGAKVAGELVRIDRRPVPFGSDLWFDGGRGFRFAVELCEDLWGVRPPSSGLALAG 185 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A +F+L+A +K R ++V Q + + + + +++F G + D Sbjct: 186 ARAIFNLSAGTELASKAAYRRDLVKQQSARCLAAYVLASAGVHESTSDVVFGGHALIADN 245 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQ------QLSQWNYMSDDS------------------ 261 +LA + + F N + D + S+ ++ ++ Sbjct: 246 -GRLAAENRRFDRGNSVIYADVDFGRLGAARCSESSFNDNEPLDRVYRRVELEEAAGSPD 304 Query: 262 ------ASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 ++P + ++ L ++ + ++IG+SGG+DS L Sbjct: 305 LEFAYNPPRPFVPEGAADRRERCLEIFDIQCAGLAKRIEHTHAKTMVIGISGGLDSTLAL 364 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 +A + ++ +P T+ ++ +A K LG + I F Sbjct: 365 LVAAECCKLLGRPASDIAAFTMPGFGTTGRTYNNAVKLCKLLGVTLREVDIRPACLRHFE 424 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + EN+Q+R R ILM ++N S M++ T + SEI++G+ T GD Sbjct: 425 DIGH--DPAVLDTAYENVQARERTQILMDVANKSGGMVVGTGDLSEIALGWSTYNGDHMS 482 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQ 477 + + KT + L P + +++ S EL P +Q Sbjct: 483 MYAVNCSIPKTLIRFLIETTAERAE-----PELAAVLRDVIDTPVSPELLPAAEDGTINQ 537 Query: 478 TDQESLPPYPILDDIIKRIVE--------NEESFINNDQEYNDETVRY----VEHLLYGS 525 ++ + PY + D + ++ + + Y E + + Sbjct: 538 KTEDLIGPYELHDFFLYHFIKYGAEPEKIRFLAEAAFEGSYPAELIDRTLATFLRRFFQQ 597 Query: 526 EYKRRQAPVGTKITAKSFGR--DRLYPISNKF 555 ++KR P G K+ S D P F Sbjct: 598 QFKRNCIPDGPKVGTISLSPRGDWRMPADASF 629 >gi|149184250|ref|ZP_01862568.1| hypothetical protein ED21_26068 [Erythrobacter sp. SD-21] gi|148831570|gb|EDL50003.1| hypothetical protein ED21_26068 [Erythrobacter sp. SD-21] Length = 687 Score = 421 bits (1084), Expect = e-115, Method: Composition-based stats. Identities = 128/658 (19%), Positives = 230/658 (34%), Gaps = 113/658 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A D++ N +A+ +G+DL+L+ EL +S Y +DL + + ++ Sbjct: 18 VRVATATPTVRTADVSYNAEGILEQARKADERGVDLLLYPELCLSSYAIDDLHLQTAMLE 77 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + + +V+G P + + N +++ G ++ V K LPNY EF+ Sbjct: 78 AVERHLGVIVEASERLSPVVVIGAPLRRNGRIYNCAIVIARGQLLGVVPKSYLPNYREFY 137 Query: 125 EKRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLK 164 EKR F G + + GI ICED W + Sbjct: 138 EKRWFSHGRESVGLNISVDGATVPFGTDLVFTAADLPGFIFGIEICEDFWSPNPPGTLAA 197 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K +RH + S Y G+ +L +DG Sbjct: 198 LAGATILLNLSASNITIGKSDERHMLTRVSSSRSVCAYAYSASGYGESTTDLAWDGQGMI 257 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA-------------------- 262 ++ L + + F + D + + M + Sbjct: 258 YEL-GDLLAESERFDRAPELCIADVDTRRILADRMRMQTWGDSAEAAGRPEDWYRRVVFK 316 Query: 263 ---------------STMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 ++P + + +N V +L + ++IG+SG Sbjct: 317 HNAGLRDIGLERPIRRFPFVPNRQEKLDEDCYEAFNIQVDALMRRIDATRSECLVIGVSG 376 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ + +++ +P TS + +A KA G + I Sbjct: 377 GLDSTHALLVAAKAMDRIGRPRSDIRGYTMPGFGTSKGTKSNAWKLMKAFGITAKEIDIK 436 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + EN+Q+ +R + L L++ ++ T + SE+++G Sbjct: 437 PTATMMLENIGHAFADGHPVYDTTFENVQAGLRTDYLFRLASQHGGWVIGTGDLSELALG 496 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD + + KT + L W T + I +IL+ S EL Sbjct: 497 WCTYGVGDQMSHYAVNAGVPKTLIQYLIRW---TTKTRQFDEGVDEILLAILDTEISPEL 553 Query: 474 RPH------QTDQESLPPYPILDDIIKRIVENEES------------------------F 503 P Q+ Q + PY + D + I+ +S Sbjct: 554 VPAGEDGNIQSTQSIIGPYELNDFFLHHIIRWGQSPSHVAFLAWHAWKDAQKGLWPIDFP 613 Query: 504 INNDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISN 553 + EY+ T+ VE S++KR P G K++ A S D P Sbjct: 614 DDARNEYDLATIAKWLENFVERFFGFSQFKRSALPNGPKVSAGGALSPRGDWRAPSDA 671 >gi|282897595|ref|ZP_06305595.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Raphidiopsis brookii D9] gi|281197518|gb|EFA72414.1| Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Raphidiopsis brookii D9] Length = 414 Score = 421 bits (1084), Expect = e-115, Method: Composition-based stats. Identities = 175/418 (41%), Positives = 244/418 (58%), Gaps = 19/418 (4%) Query: 147 ILICEDIWKNS----------NICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQIS 196 + ICED+W + N L G + + +L+ASPY K K R ++ Sbjct: 1 MTICEDLWNDEEFWGKKCYAVNPIADLSVVGVDLIVNLSASPYTVGKQKTREAMLRHTAV 60 Query: 197 HVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNY 256 + PIIY NQVGG D+LIFDG SF + Q ++ ++ + F+ + E++ Q + Sbjct: 61 NFQQPIIYTNQVGGNDDLIFDGYSFAVNSQGEILYRGRGFTPDFLIVEFNQHTQEVELAS 120 Query: 257 MSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL 316 D + I E+E ++A VL ++DYV+K F +VI+GLSGGIDSAL AAIA AL Sbjct: 121 NPDQN-PIAPIYESEDEEIWHALVLGVKDYVKKCRFSQVILGLSGGIDSALVAAIATAAL 179 Query: 317 GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSG 376 GKENV +++P Y+S S+ DA + LG K +LPI +L+ F + + G Sbjct: 180 GKENVLGVLMPSPYSSQHSVSDALKLGQNLGIKTQILPIGELMKSFDHTLFELFTGTEFG 239 Query: 377 IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 I ENIQSRIRG +LMA+SN +LL+T NKSEI+VGY TLYGDM+GG + D+ KT+ Sbjct: 240 IAEENIQSRIRGILLMAISNKFGYLLLSTGNKSEIAVGYCTLYGDMNGGLAVIADVPKTR 299 Query: 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRI 496 V+ + +W N EVIP +IL K PSAEL+P QTDQ+SLPPY ILDDI++R+ Sbjct: 300 VYSICNWLNGQNQQ-------EVIPQNILTKPPSAELKPGQTDQDSLPPYNILDDILQRL 352 Query: 497 VENEESFINNDQ-EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISN 553 + +S ++ V V L+ GSE+KRRQA G KIT ++FG PI+ Sbjct: 353 INQHQSVEEIIAGGHDLGIVNRVIKLVAGSEFKRRQAAPGLKITDRAFGTGWRMPIAA 410 >gi|297627440|ref|YP_003689203.1| glutamine-dependent NAD(+) synthetase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923205|emb|CBL57799.1| Glutamine-dependent NAD(+) synthetase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 708 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 134/689 (19%), Positives = 246/689 (35%), Gaps = 138/689 (20%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A A N + D A N + G +I F EL ++GY +DL+ + + + A Sbjct: 17 RVAAATSNTAIADPATNATRVIEHARRIAATGASVIAFPELCLTGYAIDDLLLQDTVLDA 76 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ T+ T D A I+VG P ++ + N V+L G+++ V K LP Y EF+E Sbjct: 77 ALDALHTVADATRDLAALIIVGAPLRNGSRLFNCAVVLHHGDVLGVVPKSYLPTYREFYE 136 Query: 126 KRTFISGYSNDPIV---------------------------------------------- 139 +R F G ++ Sbjct: 137 RRHFADGADQGGVIDLGAHHPATENVGTDHRDANDPGAQAGEGPSDAADHLVVPFGPDLI 196 Query: 140 -----FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQ 194 D+ + + +CED+W GA L ++++SP K ++RH + Sbjct: 197 FRADDLPDLAVHVEVCEDVWVPVPPSSLAALGGATVLVNISSSPITVGKAEQRHLLCRST 256 Query: 195 ISHVHLPIIYVNQVGGQ--DELIFDGASFCFDGQQQLAFQMKHFS--------------E 238 S +Y G+ +L +DG + ++ + LA + + Sbjct: 257 SSRNLAAYVYCAAGLGEPTTDLSWDGQTMIYENGRLLAETERFPTTPGESIADIDLDLLR 316 Query: 239 QNFMTEWHYDQQLSQWNYMSDDSASTMYIP-----------------------LQEEEAD 275 Q + E +D T++ P Q+ Sbjct: 317 QERLREGTFDDNARHERPAMRTIGFTLHPPRTDLGLRRPLERFPFVPSDPARLNQDCYEA 376 Query: 276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKY 330 YN V +L + KV+IG+SGG+DS +A A+ + ++ T +P Sbjct: 377 YNIQVSALSQRLAAIGGAKVVIGISGGLDSTQALLVAARAMDLAGRPRTDILTFTMPGFA 436 Query: 331 TSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNI 390 TS + +A ++ALG ++ L I + L + + EN+Q+ +R + Sbjct: 437 TSAHTRNNAVELSQALGTTFETLDIRPAAEQMLRDLGHPLDD--YDVTYENVQAGLRTDY 494 Query: 391 LMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 L ++N ++L T + SE+++G+ T GD + + KT + L W + G Sbjct: 495 LFRIANQRGGIVLGTGDLSELALGWATYGVGDQMSHYAVNCGVPKTLMQHLIRWVIASG- 553 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRP------HQTDQESLPPYPILDDIIKRIVENEESF 503 + SIL+ S EL P Q+ Q+++ PY + D + + + Sbjct: 554 --QFDDRVGRVLQSILDTEISPELIPVAEGAKPQSTQDTIGPYALHDFALYYWLRHGLRL 611 Query: 504 ------------------------INNDQEYNDETVRYVE----HLLYGSEYKRRQAPVG 535 + Y+ ++ +++KR P G Sbjct: 612 SKIAFLASHIWTDAGLGEWPANFPADERIAYSLADIKKWLTVFCKRFMANQFKRTAIPNG 671 Query: 536 TKI---TAKSFGRDRLYPISNKFRDHISE 561 K+ + S D P R +++ Sbjct: 672 PKVMAGGSLSPRGDWRSPSDGNARAWLAD 700 >gi|309775982|ref|ZP_07670974.1| glutamine-dependent NAD+ synthetase [Erysipelotrichaceae bacterium 3_1_53] gi|308916264|gb|EFP62012.1| glutamine-dependent NAD+ synthetase [Erysipelotrichaceae bacterium 3_1_53] Length = 643 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 127/629 (20%), Positives = 224/629 (35%), Gaps = 85/629 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK A + D+ N +R +A + + L +F EL + GY +DL+++ + Sbjct: 7 LKAACITPVVSIADVDANRKAIQRLL-QALDKDVRLAVFPELSLCGYTCQDLLYQSVLLD 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C +A+ TL+ + ++ A + +G P + + N L ++ + K +PNY+EF+ Sbjct: 66 ECLAALKTLRDE-NESEAIVAIGLPVRQGNHLFNCAAFLYKHKLLGIVPKTYVPNYNEFY 124 Query: 125 EKRTFIS-----GYSNDPI--------------VFRDIRLGILICEDIWKNSNICKHLKK 165 EKR F S G + V + + +CED+W Sbjct: 125 EKRWFSSSTQRLGDTISLFGETIPFTENLLIHDVTSEAIIAGELCEDLWVPVPPSTRHVC 184 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K R ++T + +Y + + +L+F G Sbjct: 185 HGANVIVNLSASNEIIGKSDYRKTLITTHSAKTMCGYVYTSAGVSESTSDLVFSGHDIIA 244 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE------------ 271 D ++ E E ++ S+ P E Sbjct: 245 DNGTIISESEILKEEHILYGEIDLEKCRSERMKFQTALELQDSQPYTEVCIQTAPITSPL 304 Query: 272 ----------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 N L ++K + ++IG+SGG+DS L Sbjct: 305 QLARSISPYPFVPSDPTLRSSRCMQILNMQAAGLSQRLKKIHCEHLLIGISGGLDSTLAL 364 Query: 310 AIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 +A A + +N+ + +P T+ ++ ++ +AL + IHD F Sbjct: 365 IVASMAFERIKLPSKNIIAVTMPGFGTTKRTQGNSHKLMEALHTTSREILIHDACQQHFQ 424 Query: 365 LMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSG 424 + I EN Q+R R ILM L+N ++L T + SE+++G+ T GD Sbjct: 425 DIGH--DASLQDITYENTQARERTQILMDLANAYNGIVLGTGDLSELALGWCTYNGDHMS 482 Query: 425 GFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQ 477 + + KT V L G + V I S EL P Q Sbjct: 483 MYAVNASIPKTLVRYLVETYAEAMQEQGRLDIAAV-LRDICATPVSPELLPPKDNGEIAQ 541 Query: 478 TDQESLPPYPILDDIIKRIVENEE-----------SFINNDQEYNDETVRYVEHLLYGSE 526 ++S+ Y D + ++ N +F +E T++ + + Sbjct: 542 ITEDSIGSYDYHDFFLYHMLRNGYAPAKILELACIAFGTEKREAIINTMQTFYRRFFSQQ 601 Query: 527 YKRRQAPVGTKITAKSFGR--DRLYPISN 553 +KR P G KI + D P Sbjct: 602 FKRNCLPDGVKIGSICLSPRGDWRMPSDA 630 >gi|293604903|ref|ZP_06687300.1| NAD synthetase [Achromobacter piechaudii ATCC 43553] gi|292816731|gb|EFF75815.1| NAD synthetase [Achromobacter piechaudii ATCC 43553] Length = 688 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 129/659 (19%), Positives = 244/659 (37%), Gaps = 113/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ + D A N + ++A + G L+ F EL +S Y +DL +K+ + Sbjct: 15 RVAVGVPECRIADPAFNATQTIELAQQAAQGGAVLVAFPELGLSAYTCDDLFHQKALLDE 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +A+ + T + G++VG P + + N V+ G ++ V K LPNY EF+E Sbjct: 75 CEAALARVVEATAELDIGVIVGAPLRVSHQLFNCAVVAAGGRVLGVVPKSYLPNYGEFYE 134 Query: 126 KRTFISGYSNDP---------------IVFRDIR-----LGILICEDIWKNSNICKHLKK 165 R F + ++F+ + + ICED+W Sbjct: 135 ARQFSAADCAAVTDIALLGQTVPFGPELLFQMEKLPLFQFHVEICEDVWVPIPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K + RH++V Q + +Y + G+ +L +DG + + Sbjct: 195 AGATVLVNLSASNIVVGKSQYRHQLVAQQSARCLSAYMYTSAGRGESSTDLAWDGQAIIY 254 Query: 224 DGQQQLAFQMKHFSE-QNFMTEWHYDQQLSQW----------NYMSDDSASTMYIPLQ-- 270 + + L + + ++ D+ + D+ +P+ Sbjct: 255 ENGELLGESERFLNHSHLLFSDVDLDRLSRERMRQTTFGQSVRRHQDEVRKFRSVPVPVN 314 Query: 271 -----------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + Y+ V +L + + KV+IG+SG Sbjct: 315 PPLDDAELALERRVARFPYVPADPRQRDARCKEVYSIQVQALAQRLSASKMSKVVIGISG 374 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + A+ + N+ + +P TS ++L+ A +GC + I Sbjct: 375 GLDSTHALLVCAQAMDTLGLPRSNILAVTMPGFATSTRTLQQARRLMAVVGCTASEVDIR 434 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E I EN+Q+ R N L ++N S A+++ T + SE+++G Sbjct: 435 PSCLQMLKDLGHPYAHGEPVYDITFENVQAGERTNHLFRIANFSNAIVIGTGDLSELALG 494 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD ++ + KT + L W G LG + +L S EL Sbjct: 495 WCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESGR---LGEDGAAVLLDVLGTDVSPEL 551 Query: 474 RPH-------QTDQESLPPYPILDDIIKRIV-----------------ENEESFINNDQE 509 P Q ++S+ PY + D + + + E+ D Sbjct: 552 VPGGADDKPVQKSEDSIGPYELQDFNLYYTLRYGFAPTKVAFLSLAAWRDREAGAWPDAG 611 Query: 510 ------YNDETVRY-----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 Y+ ++ ++ +++KR P K+ + S D P ++ Sbjct: 612 HVTRNQYDLAAIKRNLKIFLDRFFRTTQFKRTCVPNAPKVGSGGSLSPRGDWRAPSDSE 670 >gi|167648869|ref|YP_001686532.1| NAD synthetase [Caulobacter sp. K31] gi|167351299|gb|ABZ74034.1| NAD+ synthetase [Caulobacter sp. K31] Length = 683 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 138/661 (20%), Positives = 237/661 (35%), Gaps = 108/661 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + D A N EA+ G+ +++ EL ++GY +DL+ + + Sbjct: 15 VRVATAVPKVRLADPATNAQSVLALVREAHDAGVAVLVLPELGLTGYTIDDLLQQDVLLD 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +AID L + D VVG P +D + N+ V + G + V K LPNY EF+ Sbjct: 75 AVETAIDALAQASKDLAPLFVVGAPLRDGGRLYNTAVAIQGGRVRGVIPKSFLPNYREFY 134 Query: 125 EKRTFISGYS--NDPIVFRD------------------IRLGILICEDIWKNSNICKHLK 164 E+R F G + +G+ ICED+W + Sbjct: 135 ERRWFTPGAGVVGRTLTLAGQAVPFGTDVLLRNVGEAAFTVGVEICEDVWTPAPPSTAQA 194 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GAE L +L+AS K + R + Q + +Y G+ +L +DG Sbjct: 195 MAGAEILLNLSASNITIGKSETRRLLCASQSARAIAAYVYAAAGAGESSTDLAWDGHVDI 254 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSDDSASTMYIPLQE-------- 271 + L + FS M D + + +S A+T+ P Sbjct: 255 HEL-GNLLAESPRFSIGAEMAVADVDVGRIRQERMRVVSFGDAATLSPPAAPFRIATFDF 313 Query: 272 -----------------------------EEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 YN V L V+ ++IG+SGG Sbjct: 314 APPAGDLALMRKVERFPFTPSDPAKLAENCYEAYNIQVQGLARRVEATGSKSLVIGVSGG 373 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ + ++ LP T+ ++ +A A KA+G + I Sbjct: 374 LDSTHALIVAAKAMDQLGRPRSDILAYTLPGFATTERTKSNAWALMKAIGVTAGEIDIRP 433 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E + EN+Q+ +R + L L+NH + M++ T + SE+++G+ Sbjct: 434 AAQQMLADLGHPFAKGEPVYDVTFENVQAGLRTDYLFRLANHHQGMVVGTGDLSELALGW 493 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +NP + KT + L + + T + IL S EL Sbjct: 494 CTYGVGDQMSHYNPNSGVPKTLIQHLIRFVAASDDVDQ---ATGDLLEDILATEISPELV 550 Query: 475 PH---QTDQESLPPYPILDDIIKRIVENEESFINND------------------------ 507 P Q + + PY + D + + + Sbjct: 551 PGKEAQATESFVGPYALQDFNLYYLTRYGMAPSKIAFLAWSAWHDAAAGAWPVGIPDQAK 610 Query: 508 QEYN----DETVRYVEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISNKFRDHIS 560 + Y+ + + +++KR P G KI+ A S D P ++ Sbjct: 611 RAYDLPEIKRWLELFLKRFFANQFKRSAMPNGPKISSGGALSPRGDWRMPSDASAEAWLA 670 Query: 561 E 561 E Sbjct: 671 E 671 >gi|296282548|ref|ZP_06860546.1| NAD synthetase [Citromicrobium bathyomarinum JL354] Length = 690 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 127/662 (19%), Positives = 225/662 (33%), Gaps = 117/662 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A D++GN + +A+ G+D ++ EL ++GY +DL + + I Sbjct: 17 VRVATCTPCVRPADVSGNAKSIVQIARDAHEAGVDFAVYPELCVTGYAIDDLHLQSAVID 76 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ + ++ +V+G P + + N + + G ++ V K LPNY EF+ Sbjct: 77 AAETAVARIIEESAGLTPVLVIGAPVRRGSRLYNCALAISNGRLLGVVPKSYLPNYREFY 136 Query: 125 EKRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLK 164 EKR F G++ + GI ICED W Sbjct: 137 EKRQFTRGHNCQGLDVTIAGHEAPFGTDVIFAADNLPGFVFGIEICEDFWAPQPPGMMAA 196 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+ASP + RH S Y G+ +L +DG Sbjct: 197 MAGATILANLSASPVTIGRASDRHLHCASSSSRGMCAYAYSASGHGESTTDLAWDGQGVI 256 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADY------ 276 ++ +L + F + D Q N + + E Y Sbjct: 257 YEL-GELMQESVRFDRGAELCVIDIDTQRIVNNRTQNGTFHDASEAAGRPEDWYRRVGFT 315 Query: 277 ---------------------------------------NACVLSLRDYVQKNNFHKVII 297 N V +L ++ +++ Sbjct: 316 HNMRAAETVGGWGLKRPVRRFPFVPDDPDTLHEDCYEAVNIQVDALMRRIEATRPKSLVL 375 Query: 298 GLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDV 352 G+SGG+DS +A A +E ++ +P TS ++ ++A A G + Sbjct: 376 GISGGLDSTHALLVACVACDRLGLPRETIRGYTMPGFGTSDRTKDNALKLMDAAGITAET 435 Query: 353 LPIHDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSE 410 + I + + E EN+Q+ +R + L L+ H ++ T + SE Sbjct: 436 IDIVPAAQLMLKDIGHPFADGKEVYDTTFENVQAGLRTDYLFRLAGHHGGFVIGTGDLSE 495 Query: 411 ISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSP 469 +++G+ T GD + + KT + L W T + +L Sbjct: 496 LALGWCTYGVGDQMSHYGVNSGVPKTLIQYLMRWMIE---TDQFSHDLNEVLEDVLGTEI 552 Query: 470 SAELRPH------QTDQESLPPYPILDDIIKRIVENEES--------------------- 502 S EL P Q+ ++ + PY + D + I + +S Sbjct: 553 SPELVPAGADGAIQSTEDHIGPYALHDFFLHHIARHGQSPSHVAFLAWHAWKDAESGKWP 612 Query: 503 ---FINNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPI 551 Q Y+ T+R S++KR P G K++ A S D P Sbjct: 613 LGFPDEAKQAYDLATIRKWLAVFCRRFFGFSQFKRSAMPNGPKVSMGGALSPRGDWRAPS 672 Query: 552 SN 553 Sbjct: 673 DA 674 >gi|329891230|ref|ZP_08269573.1| carbon-nitrogen hydrolase family protein [Brevundimonas diminuta ATCC 11568] gi|328846531|gb|EGF96095.1| carbon-nitrogen hydrolase family protein [Brevundimonas diminuta ATCC 11568] Length = 682 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 134/662 (20%), Positives = 236/662 (35%), Gaps = 109/662 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A V D A N + R +A QG D+++F EL +S Y +DL + + ++ Sbjct: 18 VRVAAATPVVHVADPAANAEEHERLIRQAGAQGADMLVFPELSLSAYAIDDLHMQAALLE 77 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 I L + G V+G P ++ + + N V+L G ++ V K LPNY E++ Sbjct: 78 EVERRIARLAEVADEAGVIAVIGAPIRNGDALFNCAVVLGGGEVLGVVPKSYLPNYREYY 137 Query: 125 EKRTFIS--------------------GYSNDPIVFRDIRLGILICEDIWKNSNICKHLK 164 EKR F G + + ICED W Sbjct: 138 EKRWFAPAASRSEDAVVLNGASVDFAPGLIFEATNRPGFVFAVEICEDFWAPQPPSTRAA 197 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K +R + Q + ++ G+ +L +DG + Sbjct: 198 LAGARILCNLSASNIVIGKADERALLCASQSARTLSAYVFAASGWGESTTDLAWDGQATI 257 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS--------------------- 261 + +L + + F+ + +T D + + + + Sbjct: 258 HELGARL-AEGERFALHSHLTIADVDVDRIGLDRLRNGTFADCARIEGEAATVVPFEAGE 316 Query: 262 ----------ASTMYIPL------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 ++P Q+ +N V L + ++IG+SGG+DS Sbjct: 317 GPTGALIRPLDRFPFVPDDAARLDQDCFEAFNIQVQGLMRRMTATGSKTLVIGVSGGLDS 376 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 +A A + + +P TS + +A A KALG + I Sbjct: 377 TQALLVACRAFDRLEQPRTGILAFTMPGFATSDGTKSNAWALMKALGVTGAEIDIRPAAE 436 Query: 361 HFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + + I EN+Q+ +R + L L+N + +L T + SE+++G+ T Sbjct: 437 QMLRDIGHAFADGQPVHDITFENVQAGLRTDYLFRLANQNHGFVLGTGDLSELALGWCTY 496 Query: 419 -YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH- 476 GD +N + KT + L W G+ G +IL S EL P Sbjct: 497 GVGDHMSHYNVNGGVAKTLIQHLIRWVAERGLV---GEAAVPTLHAILATEISPELVPAG 553 Query: 477 -----QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ------------------ 508 Q+ Q + PY + D + I ++ +++ + Sbjct: 554 ADGAIQSTQSIVGPYALNDFFLFYISRFGLKPSKVAYLAHQAWGDAATGSWPVGLPQGER 613 Query: 509 -EYN----DETVRYV-EHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNKFRDHI 559 Y+ +R S++KR P G K+ + S D P + R + Sbjct: 614 VAYDLPTIKAWLRKFLIRFFQTSQFKRSAVPNGPKVVTGGSLSPRGDWRAPSDSSARVWL 673 Query: 560 SE 561 E Sbjct: 674 DE 675 >gi|85709100|ref|ZP_01040166.1| NAD(+) synthetase [Erythrobacter sp. NAP1] gi|85690634|gb|EAQ30637.1| NAD(+) synthetase [Erythrobacter sp. NAP1] Length = 687 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 126/668 (18%), Positives = 235/668 (35%), Gaps = 116/668 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A GD+A N+ +A+ Q +DL+++ EL +S Y +DL + + + Sbjct: 17 VRVATATPCMRTGDVAYNVKGILAEARKAHEQNVDLVVYPELCVSSYAIDDLHLQNAMLD 76 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ T+ + D +VVG P + + N +++ G ++ V K LPNY EF+ Sbjct: 77 ASEAALGTIAEQSRDLTPVLVVGAPLRRNSKIYNCAIVIARGEVLGVIPKSYLPNYREFY 136 Query: 125 EKRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLK 164 EKR F G + + G+ ICED W + Sbjct: 137 EKRYFAHGRNCQDLWIGVNGEEVPFGTDLVFSASNLPGFTFGVEICEDFWAPNPPGTLAA 196 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+ASP + RH S +Y G+ +L +DG Sbjct: 197 LAGAHILCNLSASPITIGRADDRHLHCRSSSSRSICAYVYSASGHGESTTDLAWDGQGVI 256 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS--------------------- 261 ++ L + + F + D M + + Sbjct: 257 YELGGLL-AESERFDLDPELCVVDVDTNRIAGERMRNQTFSDAAEAHGRPEDSFRRVVFD 315 Query: 262 --------------ASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 ++P + +N V +L +Q ++IG+SG Sbjct: 316 HEYEEGDIGLERPVRRFPFVPNNPKTLDEDCYEAFNIQVDALMRRIQATKAKSLVIGISG 375 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A + ++ +P TS + +A + + + I Sbjct: 376 GLDSTHALIVAAKACDRLGLPRSTIRGYTMPGFGTSDGTKSNAWKLMEVFEITAEEIDIK 435 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 M E + EN+Q+ +R + L L+ ++ T + SE+++G Sbjct: 436 PAAQRMLEDMGHPFAEGEPVYDVTFENVQAGLRTDYLFRLAGQHNGFVIGTGDLSELALG 495 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD + + KT + L W T P+ + S+ + S EL Sbjct: 496 WCTYGVGDHMSHYGVNSGVPKTLIRYLIRW---TVQTEQFLPVCSEVLMSVYDTVISPEL 552 Query: 474 RPH------QTDQESLPPYPILDDIIKRIVE----------------NEESFINNDQEYN 511 P Q + + PY + D + V + + + Sbjct: 553 VPAGEDGAIQDTEAHIGPYELNDFFLHHCVRFGQRPGTIAFLAWHAWRDAEAGDWPAGFP 612 Query: 512 D------------ETVRYVEHLLYG-SEYKRRQAPVGTKITAK---SFGRDRLYP---IS 552 + E ++ +G S++KR P G K++++ S D P ++ Sbjct: 613 EERKNEYTLGEIAEWLQSFLKRFFGFSQFKRSALPNGPKVSSQGALSPRGDWRAPSDAVA 672 Query: 553 NKFRDHIS 560 + + D + Sbjct: 673 DVWLDELK 680 >gi|94309625|ref|YP_582835.1| NAD synthetase [Cupriavidus metallidurans CH34] gi|93353477|gb|ABF07566.1| Glutamine-dependent NAD(+) synthetase (NAD(+) synthase (glutamine-hydrolyzing)) [Cupriavidus metallidurans CH34] Length = 716 Score = 418 bits (1076), Expect = e-114, Method: Composition-based stats. Identities = 137/659 (20%), Positives = 239/659 (36%), Gaps = 117/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+ V D A N + +A G L+ F EL +S Y +DL +++ ++ Sbjct: 44 RVAVGVPECRVADPAFNAEQTILLARQAADGGAVLVAFPELGLSAYTCDDLFHQRALLRE 103 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C A+ + + A ++VG P + + N V++ G I V K LPNY EF+E Sbjct: 104 CELALQRIVEASAGINAALIVGLPVLVEHQLFNCAVVVAGGKIQGVVPKTYLPNYWEFYE 163 Query: 126 KRTFISGY-SNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 R F S + P+V R ICED+W Sbjct: 164 ARQFSSADCAATPLVSLLGAEVPFGADLLFEIESIPFFRFHAEICEDVWVPIPPSSFAAL 223 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V+ Q + +Y + G+ +L +DG + + Sbjct: 224 AGATVLVNLSASNIVIGKSGYRHQLVSQQSARCLAAYLYTSAGKGESTTDLAWDGQALIY 283 Query: 224 DGQQQLAFQMKHFS-----------------------------------EQNFMTEWHYD 248 + + L + E+ +H D Sbjct: 284 ENGELLGESERFADSSHLLFADVDLERLSRERMHQTSFGQSVRRHHEEVERFDTVSFHID 343 Query: 249 QQLSQWNYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 +Q + A Y+P YN V +L + + KV+IG+SGG Sbjct: 344 VPSTQALPLQRKVARFPYVPSDPRQRDERCMEVYNIQVQALVQRLSSSKISKVVIGVSGG 403 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS + A+ + N+ +P TS ++L+ A K +GC + I Sbjct: 404 LDSTHALLVCAKAMDRLGLPRSNILAYTMPGFATSDRTLQQARELMKLVGCTAREIDIRP 463 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E + EN+Q+ R N L L+NH+ A+++ T + SE+++G+ Sbjct: 464 SCLAMLADLDHPYSRGEPVYDVTFENVQAGERTNHLFRLANHNHAIVIGTGDLSELALGW 523 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL- 473 T GD +N + KT + L W G + G + ++L S EL Sbjct: 524 CTYGVGDHMSHYNVNASVPKTLISHLVRWVAETGQVAEGGQD---VLLAVLATDISPELV 580 Query: 474 -----------RPHQTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYNDETVRY 517 P Q ++ + PY + D + + ++ +F+ + + Sbjct: 581 PSGATAAGQDKAPEQKTEQIIGPYELQDFNLYYTLRFGFTPSKVAFLALHAWGDAARGTW 640 Query: 518 -----------------------VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP 550 V+ S++KR P K+ + S D P Sbjct: 641 PNGPHVARNVYQLPEIKRVLGIFVDRFFRTSQFKRSCIPNAPKVGSGGSLSPRGDWRAP 699 >gi|163853433|ref|YP_001641476.1| NAD synthetase [Methylobacterium extorquens PA1] gi|163665038|gb|ABY32405.1| NAD+ synthetase [Methylobacterium extorquens PA1] Length = 690 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 136/663 (20%), Positives = 237/663 (35%), Gaps = 111/663 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A GD A N+A +A+ G L +F EL +S Y EDL+ + + + A Sbjct: 24 RVAACTGRSHPGDPAANVADISGLARQAHEAGAALAVFPELCVSSYAIEDLLLQATLLDA 83 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + L ++ + +VVG P + + + N V + G ++ V K LPNY EF+E Sbjct: 84 VETGVARLVEESAELTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYE 143 Query: 126 KRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLKK 165 KR F SG R RL I +CED+W Sbjct: 144 KRHFASGAGITAETIRLGGLEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMDAVL 203 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + + SP + R + +Y G+ +L +DG + Sbjct: 204 AGATVIANPSGSPITVGRADSRALLTRAASMRGLCAYVYAAAGTGESTTDLSWDGQTSID 263 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS----DDSASTMYIPL---------- 269 + +L + + F + +T D L + DD+A P Sbjct: 264 ENGVRL-AEGQRFPQAPVVTLADIDLDLIAQERLQAGSLDDNAPRHGTPPWRTIPFRLDP 322 Query: 270 -------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q+ YN V L + + +IG+SGG+D Sbjct: 323 PESDLGLERRVERFPFVPADPARLAQDCYEAYNIQVAGLAQRLAATGTKRAVIGVSGGLD 382 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S + A ++++ LP TS ++ +A A +ALG + + I Sbjct: 383 STHALIVVAKAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAA 442 Query: 360 NHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + M E + EN+Q+ +R + L L+N +++ T + SE+++G+ T Sbjct: 443 RQMLTDMGHPFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWST 502 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD + + KT + L W + G G ++L+ S EL P Sbjct: 503 YGVGDQMSHYGVNAGVPKTLIQHLIRWVIASG---QFGEAEIRTLRAVLDTEISPELVPA 559 Query: 477 ------QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQEYNDET---------VR 516 Q+ + + PY + D + + + + +F+ + V+ Sbjct: 560 SEGEGPQSTEAKIGPYALQDFNLWFTLRHGFRPSKIAFLALHAWGDAAAGDWPPDFPEVK 619 Query: 517 YV---------------EHLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISNKFRDH 558 V + S++KR P G K++A S D P R Sbjct: 620 RVAYELPEIRRWLGVFLDRFFRFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDASARAW 679 Query: 559 ISE 561 + E Sbjct: 680 LDE 682 >gi|293190123|ref|ZP_06608661.1| putative NH(3)-dependent NAD(+) synthetase [Actinomyces odontolyticus F0309] gi|292821099|gb|EFF80051.1| putative NH(3)-dependent NAD(+) synthetase [Actinomyces odontolyticus F0309] Length = 693 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 137/664 (20%), Positives = 246/664 (37%), Gaps = 123/664 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L N + A E + +G+ + +F EL +SGY +DL + + Sbjct: 13 RVAAVTLPVHPARPFENAREIIDAARELDARGVAMGVFPELCVSGYAIDDLFLQDVLLDN 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ + + D +VVG P + + N V + G ++A+ K +LPNY EF+E Sbjct: 73 VEKALAQIVEASADLLPFLVVGAPLRKDNALYNCAVAIHRGRVLAIVPKSHLPNYREFYE 132 Query: 126 KRTFIS-----------------GYSNDPIV------------FRDIRLGILICEDIWKN 156 KR F++ +S P+ + +GI ICED+W Sbjct: 133 KRHFVTMPPRACERIEVPWGGVEEFSGGPVWVPFGQVLLSADDVPGLTIGIEICEDMWVP 192 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--EL 214 L GA L +L+ASP + R +V + +Y G+ +L Sbjct: 193 VTPATELALAGATVLANLSASPITVGRGADRELMVRSVSARCSAAYVYTAAGMGESSTDL 252 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS------------- 261 +DG + ++ +LA + F E +T D + + +S Sbjct: 253 AWDGEAMIYEAGDRLAI-GERFQEGAHITIADVDLERLRTERKRQNSFTDNAQRYFAGDE 311 Query: 262 ------------------------ASTMYIPL------QEEEADYNACVLSLRDYVQKNN 291 ++P Q+ YN V L ++ Sbjct: 312 RMAPQEVEFTLDPPRTNLGLERPVNRFPFVPNDPTRLEQDCYEAYNIQVAGLVQRLRAIG 371 Query: 292 FHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 K+IIG+SGG+DS +A A+ + ++ LP TS ++ ++A + L Sbjct: 372 NPKIIIGVSGGLDSTHALVVAAHAMDLLGRPRTDILCYTLPGFATSERTKKNATLLCQYL 431 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLT 404 G + + I + + E + + EN+Q+ +R + L L+NH + ++L Sbjct: 432 GTSFQEIDIRPAATQMLADIGHPYGEGEATYDVTFENVQAGLRTDYLFRLANHLRGIVLG 491 Query: 405 TSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T + SE+++G+ T GD + + KT + L W + + EV+ S Sbjct: 492 TGDLSELALGWCTYGVGDQMSHYAVNTGVPKTLMQHLIRWVVASKQFDDH--VGEVLL-S 548 Query: 464 ILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ---- 508 IL S EL P Q+ Q+ + PY + D + ++ + +F+ Sbjct: 549 ILNTEISPELVPAKPGEKMQSTQDKIGPYNLQDFTLYHVLRRGARPSKIAFLAEKAWSDA 608 Query: 509 -------EYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRD 546 + +E R + ++KR P G K+ + S D Sbjct: 609 SVGSWPVGFPEEDKVAYSLEEIVKWERLFLWRFFSQQFKRSALPNGPKVMAGGSLSPRGD 668 Query: 547 RLYP 550 P Sbjct: 669 WRMP 672 >gi|218532293|ref|YP_002423109.1| NAD synthetase [Methylobacterium chloromethanicum CM4] gi|218524596|gb|ACK85181.1| NAD+ synthetase [Methylobacterium chloromethanicum CM4] Length = 690 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 135/663 (20%), Positives = 234/663 (35%), Gaps = 111/663 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A GD A N+A +A+ G L +F EL +S Y EDL+ + + + A Sbjct: 24 RVAACTGRSHPGDPAANVADISGLARQAHGAGAALAVFPELCVSSYAIEDLLLQATLLDA 83 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + L ++ +VVG P + + + N V + G ++ V K LPNY EF+E Sbjct: 84 VETGVARLVEESAGLTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYE 143 Query: 126 KRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLKK 165 KR F SG R RL I +CED+W Sbjct: 144 KRHFASGAGITAETIRLGGLEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMDAVL 203 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + + SP + R + +Y G+ +L +DG + Sbjct: 204 AGATVIANPSGSPITVGRADSRALLTRAASMRGLCAYVYAAAGTGESTTDLSWDGQTSID 263 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLS----------QWNYMSDDSASTMYIPL---- 269 + +L + + F + +T D L N + IP Sbjct: 264 ENGVRL-AEGQRFPQAPVVTLADIDLDLIAQERLQAGSLDDNARRHGTPPWRTIPFRLDP 322 Query: 270 -------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q+ YN V L + + +IG+SGG+D Sbjct: 323 PESDLGLERRVERFPFVPADPARLAQDCYEAYNIQVAGLAQRLAATGTKRAVIGVSGGLD 382 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S + A ++++ LP TS ++ +A A +ALG + + I Sbjct: 383 STHALIVVAKAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAA 442 Query: 360 NHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + M E + EN+Q+ +R + L L+N +++ T + SE+++G+ T Sbjct: 443 RQMLADMGHPFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWST 502 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD + + KT + L W + G G ++L+ S EL P Sbjct: 503 YGVGDQMSHYGVNAGVPKTLIQHLIRWVIASG---QFGEAENRTLRAVLDTEISPELVPA 559 Query: 477 ------QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ----------------- 508 Q+ + + PY + D + + + + +F+ Sbjct: 560 SEGEGPQSTEAKIGPYALQDFNLWFTLRHGFRPSKIAFLALHAWGDAAAGDWPPDFPQAK 619 Query: 509 --EYNDETVRYV-----EHLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISNKFRDH 558 Y+ +R + S++KR P G K++A S D P R Sbjct: 620 RVAYDLAEIRRWLGVFLDRFFRFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDASARAW 679 Query: 559 ISE 561 + E Sbjct: 680 LDE 682 >gi|254563362|ref|YP_003070457.1| NAD(+) synthase [Methylobacterium extorquens DM4] gi|254270640|emb|CAX26644.1| NAD(+) synthase (glutamine-hydrolyzing) with a nitrilase-like domain [Methylobacterium extorquens DM4] Length = 690 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 134/663 (20%), Positives = 234/663 (35%), Gaps = 111/663 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A GD A N+A +A+ G L +F EL +S Y EDL+ + + + A Sbjct: 24 RVAACTGRSHPGDPAANVADISGLARQAHGAGAALAVFPELCVSSYAIEDLLLQATLLDA 83 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + L ++ +VVG P + + + N V + G ++ V K LPNY EF+E Sbjct: 84 VETGVARLVEESAGLTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYE 143 Query: 126 KRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLKK 165 KR F SG R RL I +CED+W Sbjct: 144 KRHFASGAGITAETIRLAGLEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMDAVL 203 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + + SP + R + +Y G+ +L +DG + Sbjct: 204 AGATVIANPSGSPITVGRADSRALLTRAASMRGLCAYVYAAAGTGESTTDLSWDGQTSID 263 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ----------LSQWNYMSDDSASTMYIPL---- 269 + +L + + F + +T D N ++ IP Sbjct: 264 ENGVRL-AEGQRFPQAPVVTLADIDLDLIAQERLQAGSFDDNARRHGTSPWRTIPFRLDP 322 Query: 270 -------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q+ YN V L + + +IG+SGG+D Sbjct: 323 PESDLGLERRVERFPFVPADPARLAQDCYEGYNIQVAGLAQRLAATGTKRAVIGVSGGLD 382 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S + A ++++ LP TS ++ +A A +ALG + + I Sbjct: 383 STHALIVVAKAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAA 442 Query: 360 NHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + M E + EN+Q+ +R + L L+N +++ T + SE+++G+ T Sbjct: 443 RQMLADMGHPFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWST 502 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD + + KT + L W + G G ++L+ S EL P Sbjct: 503 YGVGDQMSHYGVNAGVPKTLIQHLIRWVIASG---QFGEAENRTLRAVLDTEISPELVPA 559 Query: 477 ------QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ----------------- 508 Q+ + + PY + D + + + + +F+ Sbjct: 560 SEGEGPQSTEAKIGPYALQDFNLWFTLRHGFRPSKIAFLALHAWGDAAAGDWPPDFPQAK 619 Query: 509 --EYNDETVRYV-----EHLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISNKFRDH 558 Y+ +R + S++KR P G K++A S D P R Sbjct: 620 RVAYDLAEIRRWLGVFLDRFFRFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDASARAW 679 Query: 559 ISE 561 + E Sbjct: 680 LDE 682 >gi|301166608|emb|CBW26184.1| NH(3)-dependent NAD(+) synthetase [Bacteriovorax marinus SJ] Length = 578 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 183/586 (31%), Positives = 281/586 (47%), Gaps = 45/586 (7%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++I I Q + +GD + G +L +F ELF++GYP +DL ++SFI+ Sbjct: 1 MQINIQQTHHTIGDFDAIFTYIENLLRDNQGSG-ELFIFPELFLTGYPLQDLCLQRSFIE 59 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF--PRQDQEGV----LNSVVILDAGNIIAVRDKINLP 118 + ++ L + +++G D EG+ N + + + K LP Sbjct: 60 RYNDFLEKLNALQDKLNPTLLLGGLDYEMDSEGLPLRIRNVIFEFGPKPLEPIYTKKLLP 119 Query: 119 NYSEFHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEF-------- 170 NY F E++ F +G + FRD + G+LICED+W +S K+ E Sbjct: 120 NYDIFDEQKYFSAGSESCIYQFRDKKFGLLICEDMWMSSMHSTDPVKELYELTENEDITL 179 Query: 171 --LFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQ- 227 + +L+ASP+Y K K R + + P Y N+VGG+DE++FDG+SF +G Sbjct: 180 DGVINLSASPFYLGKDKTRLIRASEISTLFCCPFFYTNRVGGEDEILFDGSSFVVNGSSV 239 Query: 228 ----------QLAFQMKHFS--EQNFMTEWHYDQQL-----SQWNYMSDDSASTMYIPLQ 270 L +M FS E++ + + Q Sbjct: 240 THRAKFYQPDILKIEMSKFSPVEKSLRALSDRVNSWESLFKANITKNEQGQYRIPELSDQ 299 Query: 271 EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKE-NVQTIMLPYK 329 + E + +++Y +K+ F + LSGGIDSAL A+ +L ++ N++ I +P Sbjct: 300 DCEEILQSLRFGIQEYARKSGFKNFDVALSGGIDSALVLAVMKLSLEEDQNLEAIFMPGF 359 Query: 330 YTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGN 389 +++ S + + K +G K PI + + ++ G+ ENIQSR+RG Sbjct: 360 FSATMSYDLSFEMCKKIGVKLTTFPIKFAHSSLRTQYQDVFKDPMEGLCDENIQSRLRGA 419 Query: 390 ILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGI 449 IL A SN +M+L TSNKSE+SVGY TLYGD G +PL DLYK++VF L+ + N Sbjct: 420 ILYARSNQRNSMVLNTSNKSELSVGYSTLYGDSVGAISPLGDLYKSEVFALSRYINKQY- 478 Query: 450 TSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLPPYPILDDIIKRIVENEESFIN-NDQ 508 E+IP I+++ PSAELR Q D +SLP YP+LD I++ I+ S N + Sbjct: 479 -------GEIIPVGIIDRPPSAELREDQEDSQSLPEYPVLDTILEGILSYRLSTKNLIEM 531 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGRDRLYPISNK 554 + + V V L SEYKR+Q KI AKSFG PI K Sbjct: 532 GLDADEVSKVFKLYTRSEYKRKQFCPIIKIKAKSFGTGYRIPICKK 577 >gi|156742176|ref|YP_001432305.1| NAD synthetase [Roseiflexus castenholzii DSM 13941] gi|156233504|gb|ABU58287.1| NAD synthase [Roseiflexus castenholzii DSM 13941] Length = 692 Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 139/672 (20%), Positives = 242/672 (36%), Gaps = 119/672 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ + V N+A+ E A+ + LF EL +S Y +DL + + ++ Sbjct: 13 IRAAVCIPSLRVATPEHNVARTLALAERASATNAAVALFPELGLSAYTCDDLFQQDALLE 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++ L + ++VG P + G+ N V++ G I+ + K +PNY EF+ Sbjct: 73 GVLNALERLVDASRALTPVLLVGAPLRIDSGLYNCAVVIYRGRILGIVPKSYIPNYREFY 132 Query: 125 EKRTFISGYS---------NDPIVFR-----------DIRLGILICEDIWKNSNICKHLK 164 EKR F + D + F L + ICED+W + Sbjct: 133 EKRQFSAARDAIRQTVRLAGDTVPFGADLIFTAENIPGFTLHVEICEDVWVPAPPSTFAA 192 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K R + Q +Y G+ +L +DG + Sbjct: 193 LAGATILANLSASNITIGKADYRRMLCAAQSGVCLAAYLYSAAGPGESTTDLAWDGHALI 252 Query: 223 FDGQQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMS---------------------- 258 ++ +L + + F EQ + ++ + + + Sbjct: 253 YEL-GELLAESERFARDEQIITADIDIERIVQERIRTTSFADSSGDHRERLRAMRRIPFT 311 Query: 259 -----------DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 A Y+P Y+ V L + KV+IG+SG Sbjct: 312 FETPTGDVPLQRTIARFPYVPADPVRRDERCYEAYSIQVHGLMKRLVSTGIEKVVIGVSG 371 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A + + N+ +P TS +L +A +ALG + I Sbjct: 372 GLDSTQALIVAARTMDRLDLPRTNILAYTMPGFATSETTLTNARNLMRALGVSAGEIDIR 431 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E + EN+Q+ R + L L+N A+++ T + SE+++G Sbjct: 432 PSCMQMLRDIGHPFARGEPVYDVTFENVQAGDRASHLFRLANMHGALVVGTGDLSELALG 491 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N KT + L W G T I SIL S EL Sbjct: 492 WATYGVGDHMSHYNVNASAPKTLIQHLIRWVADSG---QFDDATSAILRSILSTEISPEL 548 Query: 474 ---------RPHQTDQESLPPYPILDDIIKRIVE-----NEESFI--------------- 504 RP Q+ Q + PY + D + I ++ +F+ Sbjct: 549 VPPDGADHSRPAQSTQAIIGPYELQDFNLFYITRYGFRPSKVAFLAWNAWSDATRGEWPP 608 Query: 505 ----NNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPIS 552 ++ ++Y+ T+R S++KR P G KI + S D P Sbjct: 609 GLPGDDRRQYDLATIRRWLEVFLWRFFKISQFKRSALPNGPKIGSGGSLSPRGDWRAPSD 668 Query: 553 NK---FRDHISE 561 + + D + Sbjct: 669 AEADVWLDELRR 680 >gi|258543692|ref|YP_003189125.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256634770|dbj|BAI00746.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256637826|dbj|BAI03795.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256640880|dbj|BAI06842.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256643935|dbj|BAI09890.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646990|dbj|BAI12938.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256650043|dbj|BAI15984.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256653033|dbj|BAI18967.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656087|dbj|BAI22014.1| NAD(+) synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 677 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 136/659 (20%), Positives = 241/659 (36%), Gaps = 108/659 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + + A N + + + A G L +F EL + GY EDL+ +++ + Sbjct: 12 RVAACTLPVALANPAINAQRILESAKTAATDGAVLCVFPELGLCGYTLEDLLQQEALLAE 71 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + +L + A +VVG P + + N +++ +G I+ V K +PNY EF+E Sbjct: 72 TRKTLLSLAQASAALCAVLVVGAPLLWKNALYNCAIVIHSGKILGVVPKSYIPNYREFYE 131 Query: 126 KRTFISGY--SNDPIVFRD------------------IRLGILICEDIWKNSNICKHLKK 165 R F SG I L + ICED+W H Sbjct: 132 ARHFRSGADIRGQTIEINGHTVPFGVDLLFEAEDVPSFCLSVEICEDMWVPIPPSAHAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R+ + + +Y G+ +L +DG + F Sbjct: 192 AGATIIANLSASDITVGKAETRNMLCQSLSARNIAAYLYAAAGEGESTTDLAWDGQTAIF 251 Query: 224 DGQQQLAFQMKHFSEQ-NFMTEWHY----------------------DQQLSQWNYMSDD 260 + LA + S + + D ++ Sbjct: 252 ENGTLLAASERFPSGATTVIADVDLTLLRQERLRMGSFADAAHQVETDAWRHIRFILAPP 311 Query: 261 SA---------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 SA ++P Q+ + V +L+ ++ + ++IG+SGG+DS Sbjct: 312 SANLGLKRPLSRFPFVPAAPERLAQDCFEAFTIQVSALKQRLKTSGVKTMVIGISGGLDS 371 Query: 306 ALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 +AV A + V+ +P T+ ++L A A L ++ L I Sbjct: 372 THALLVAVRAADELGWPRSAVRGYTMPGFGTTNKTLASANALMAQLNITHETLDIRPAAE 431 Query: 361 HFFSLM-SQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 M + +P I EN+Q+ +R + L L+N +++ T + SE+++G+ T Sbjct: 432 LMLRTMRHPYADGQPVHDITFENVQAGLRTDFLFRLANQHHGIVIGTGDLSELALGWCTY 491 Query: 419 -YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-- 475 GD +N L KT + L W + G P + +L S EL P Sbjct: 492 GVGDQMAHYNVNAGLPKTLIQHLIRWCIASG---HFAPAVGKVLTDVLATEISPELIPVG 548 Query: 476 ---HQTDQESLPPYPILDDIIKRIVENEES------------------------FINNDQ 508 Q+ + + PY + D + I+ S + + Sbjct: 549 ENGPQSTESIIGPYALHDFALFYILRYGFSPSRVAFLAEQAWQDASTGQWPPGFPASEQK 608 Query: 509 EYNDETVRY-----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNKFRDHI 559 Y+ T+R+ V S++KR P G K+ + S D P R + Sbjct: 609 SYDLPTIRHWLEIFVRRFFATSQFKRSAMPNGPKVMPGGSLSPRGDWRAPSDGNARLWL 667 >gi|296170500|ref|ZP_06852087.1| NAD synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894852|gb|EFG74574.1| NAD synthetase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 680 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 136/669 (20%), Positives = 257/669 (38%), Gaps = 115/669 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + + D A N R E + G+ + +F EL +SGY ED+V + + Sbjct: 12 VRVAACTHHTTIADPAANAESVLRLARECHDDGVAVAVFPELTLSGYSIEDIVMQDLLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A++++ + + D +VVG P + + + N+ +++ G ++ V K LP Y EF+ Sbjct: 72 DVQAAVESIVAASSDLLPILVVGAPLRHRHRIYNTAIVVHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R G + L + ICED++ Sbjct: 132 ERRQLAPGDDERGTIRICDADVPFGPDLLFAASDIPGFVLHVEICEDMFVPIPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRCLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMVW 251 Query: 224 DGQQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYM------------------------ 257 + +L + F E+ + + D S+ M Sbjct: 252 EN-GELLASSERFPKGERRSVADVDIDLLRSERLRMGTFDDNRRHHRGSAESFRRVDFRL 310 Query: 258 ---------SDDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D ++P Q+ YN V L ++ NF K++IG+SGG Sbjct: 311 DPPGGDIGLRRDIERFPFVPANRERLEQDCYEAYNIQVAGLEQRLRALNFPKIVIGVSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T ++ +A +ALG + + I + Sbjct: 371 LDSTHALIVAARAMDREQRPRSDILAFTLPGFATGDRTKRNAIELCRALGVTFSEIDITE 430 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 F M E+ + EN+Q+ +R + L L+N ++L T + SE+ +G+ Sbjct: 431 TAMLMFKEMDHPFGRGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELGLGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S G + S+L+ S EL Sbjct: 491 STYGVGDQMSHYNVNGGVPKTLIQHLIRWVISSGQFES---DVTDVLQSVLDTEISPELV 547 Query: 475 PH------QTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQE-------- 509 P Q+ ++ + PY + D + ++ ++ + ++ Sbjct: 548 PSGEEEDLQSSEDKVGPYALQDFSLFHVLRYGFRPSKIAFLAWHAWSDAERGNWPPGFPE 607 Query: 510 -----YNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK 554 Y+ + +R+ V+ S++KR P G K++ A S D P +S + Sbjct: 608 GKRPTYSLKEIRHWLGVFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSAR 667 Query: 555 -FRDHISEE 562 + D I + Sbjct: 668 IWLDEIERQ 676 >gi|240140853|ref|YP_002965333.1| NAD(+) synthase (glutamine-hydrolyzing) with a nitrilase-like domain [Methylobacterium extorquens AM1] gi|240010830|gb|ACS42056.1| NAD(+) synthase (glutamine-hydrolyzing) with a nitrilase-like domain [Methylobacterium extorquens AM1] Length = 682 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 136/663 (20%), Positives = 235/663 (35%), Gaps = 111/663 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A GD A N+A +A+ G L +F EL +S Y EDL+ + + + A Sbjct: 16 RVAACTGRSHPGDPAANVADISGLARQAHGAGAALAVFPELCVSSYAIEDLLLQATLLDA 75 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + L ++ +VVG P + + + N V + G ++ V K LPNY EF+E Sbjct: 76 VETGVARLVEESAGLTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYE 135 Query: 126 KRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLKK 165 KR F SG R RL I +CED+W Sbjct: 136 KRHFASGAGITAETIRLGGLEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMDAVL 195 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + + SP + R + +Y G+ +L +DG + Sbjct: 196 AGATVIANPSGSPITVGRADSRALLTRAASMRGLCAYVYAAAGTGESTTDLSWDGQTSID 255 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNY----MSDDSASTMYIPL---------- 269 + +L + + F + +T D L DD+A P Sbjct: 256 ENGVRL-AEGQRFPQAPVVTLADIDLDLIAQERLQAGSFDDNARRHGTPSWRTIPFRLDP 314 Query: 270 -------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q+ YN V L + + +IG+SGG+D Sbjct: 315 PESDLGLERRVERFPFVPADPARLAQDCYEAYNIQVAGLAQRLAATGTKRAVIGVSGGLD 374 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S + A ++++ LP TS ++ +A A +ALG + + I Sbjct: 375 STHALIVVAKAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAA 434 Query: 360 NHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + M E + EN+Q+ +R + L L+N +++ T + SE+++G+ T Sbjct: 435 RQMLADMGHPFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWST 494 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD + + KT + L W + G G ++L+ S EL P Sbjct: 495 YGVGDQMSHYGVNAGVPKTLIQHLIRWVIASG---QFGEAENRTLRAVLDTEISPELVPA 551 Query: 477 ------QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ----------------- 508 Q+ + + PY + D + + + + +F+ Sbjct: 552 SEGEGPQSTEAKIGPYALQDFNLWFTLRHGFRPSKIAFLALHAWGDAAAGDWPPDFPQAK 611 Query: 509 --EYNDETVRYV-----EHLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISNKFRDH 558 Y+ +R + S++KR P G K++A S D P R Sbjct: 612 RVAYDLPEIRRWLGVFLDRFFRFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDASARAW 671 Query: 559 ISE 561 + E Sbjct: 672 LDE 674 >gi|329113857|ref|ZP_08242628.1| Glutamine-dependent NAD(+) synthetase [Acetobacter pomorum DM001] gi|326696867|gb|EGE48537.1| Glutamine-dependent NAD(+) synthetase [Acetobacter pomorum DM001] Length = 679 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 135/659 (20%), Positives = 244/659 (37%), Gaps = 108/659 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A L + + A N + + + G L +F EL + GY EDL+ +++ + Sbjct: 15 VRVAACTLPVALANPAINAQRILESAKACAADGTVLCVFPELGLCGYTLEDLLQQETLLA 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + +L + +VVG P + + N VI+ +G I+ V K +PNY EF+ Sbjct: 75 ETRTTLLSLAQASATLCPVLVVGAPLLWKNALYNCAVIIHSGKILGVVPKSYIPNYREFY 134 Query: 125 EKRTFISGYSND----PIVFRDIRLG----------------ILICEDIWKNSNICKHLK 164 E R F SG I + G + ICED+W H Sbjct: 135 EARHFRSGADIRGQTIKINGHTVPFGVDLLFEAQDVPSFSLSVEICEDMWVPIPPSAHAA 194 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L+AS K + R+ + + + +Y G+ +L +DG + Sbjct: 195 LAGATIIANLSASDITVGKAETRNMLCQSLSARNIVAYLYAAAGEGESTTDLAWDGQTAI 254 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS--------------------- 261 F+ L + F D L + + S Sbjct: 255 FEN-GILLADSERFPSGATAVIADVDLTLLRQERLRMGSFADAARQADTWRHISFTLTPP 313 Query: 262 ----------ASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 A ++P Q+ + V +L+ ++ + ++IG+SGG+DS Sbjct: 314 SANLGLKRPLARFPFVPAAPERLAQDCFEAFTIQVSALKQRLKTSGVKTMVIGISGGLDS 373 Query: 306 ALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 +AV A + V+ +P T+ ++L A A L ++ L I Sbjct: 374 THALLVAVRAADELGWPRSAVRGYTMPGFGTTDKTLASANALMSQLNITHETLDIRPAAE 433 Query: 361 HFFSLM-SQFLQEEP-SGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 + + +P I EN+Q+ +R + L L+N +++ T + SE+++G+ T Sbjct: 434 LLLRTIRHPYADGQPVHDITFENVQAGLRTDFLFRLANQHHGIVIGTGDLSELALGWCTY 493 Query: 419 -YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-- 475 GD +N L KT + L W + G P + +L S EL P Sbjct: 494 GVGDQMAHYNVNAGLPKTLIQHLIRWCIASG---HFAPAVGKVLTDVLATEISPELIPVG 550 Query: 476 ---HQTDQESLPPYPILDDIIKRIVE-----------NEESFIN-------------NDQ 508 Q+ + + PY + D + I+ E+++ + + Sbjct: 551 KDGPQSTESIIGPYALHDFALFYILRYGFRPSRVAFLAEQAWQDASTGQWPPGFPASEQK 610 Query: 509 EYNDETVRY-----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNKFRDHI 559 Y+ T+R+ V S++KR P G K+ + S D P R + Sbjct: 611 AYDLPTIRHWLEIFVRRFFATSQFKRSAMPNGPKVMPGGSLSPRGDWRAPSDGNARLWL 669 >gi|148656798|ref|YP_001277003.1| NAD synthetase [Roseiflexus sp. RS-1] gi|148568908|gb|ABQ91053.1| NAD+ synthase [Roseiflexus sp. RS-1] Length = 686 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 140/672 (20%), Positives = 237/672 (35%), Gaps = 119/672 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ + V D A N+ + E A+ + LF EL +S Y +DL + + ++ Sbjct: 13 VRVAVCIPSLRVADPAYNVTRTIGLAERASVANAAVALFPELGLSAYTCDDLFQQDALLE 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A++ L + ++VG P + + N +++ G I+ V K +PNY EF+ Sbjct: 73 GVLDALNRLIDASRSLTPVLLVGAPLRIDGALYNCAIVIYHGRILGVVPKSYIPNYREFY 132 Query: 125 EKRTFISGYS---------NDPIVFR-----------DIRLGILICEDIWKNSNICKHLK 164 EKR F + + F L ICED+W + Sbjct: 133 EKRQFSAARDALRQTITLAGATVPFGNDLIFVAGNVPGFALHAEICEDVWVPAPPSSFAA 192 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K R + Q +Y G+ +L +DG + Sbjct: 193 LAGATILANLSASNITIGKADYRRMLCAAQSGTCIAAYLYSAAGPGESTTDLAWDGHALI 252 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS--------------------- 261 ++ +L + F++ M D + M S Sbjct: 253 YEL-GELLAETGRFADDERMITADIDLERIVQERMRTTSFADAIGDHRERLRTMRHIPFT 311 Query: 262 --------------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 Y+P YN V L + KV+IG+SG Sbjct: 312 FDIPEGDVPLQRIIDRFPYVPGDPSRRDERCYEAYNIQVHGLMKRLISTGIEKVVIGVSG 371 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A + + N+ +P TS +L +A + ALG + I Sbjct: 372 GLDSTHALIVAARTMDRLNLPRTNILAYTMPGFATSEITLANARSLMHALGVTAGEIDIR 431 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E + EN+Q+ R + L L+N A+++ T + SE+++G Sbjct: 432 PSCMQMLRDIGHPFARGEPVYDVTFENVQAGDRTSHLFRLANMHGALVVGTGDLSELALG 491 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N KT + L W G T I SIL S EL Sbjct: 492 WATYGVGDHMSHYNVNASAPKTLIQHLIRWVADSG---QFDDATSAILRSILSTEISPEL 548 Query: 474 ---------RPHQTDQESLPPYPILDDIIKRIVE-----NEESFI--------------- 504 RP Q+ Q + PY + D + I ++ +F+ Sbjct: 549 IPPGDADHSRPAQSTQAIIGPYELQDFNLFYITRYGFRPSKVAFLAWNAWSDASRGDWPP 608 Query: 505 ----NNDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPIS 552 + ++Y+ T+R + S++KR P G KI + S D P Sbjct: 609 GLPGDERRQYDLATIRRWLDVFIRRFFKTSQFKRSALPNGPKIGSGGSLSPRGDWRAPSD 668 Query: 553 NK---FRDHISE 561 + + D + Sbjct: 669 AEAEVWLDELRR 680 >gi|114326951|ref|YP_744108.1| NAD synthetase [Granulibacter bethesdensis CGDNIH1] gi|114315125|gb|ABI61185.1| glutamine-dependent NAD(+) synthetase [Granulibacter bethesdensis CGDNIH1] Length = 702 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 135/653 (20%), Positives = 243/653 (37%), Gaps = 111/653 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + + A N + A+ QG+ +++F EL +SGY +DLV + + Sbjct: 33 VRVAACVPPVHIANPARNADEIAALAMRADAQGVAVVVFPELCLSGYAIDDLVQQDVLLD 92 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +AI L + + IV+G P + + N+ ++L G ++ V K LPNY EF+ Sbjct: 93 AVDAAIGALLRRSAGWMSVIVIGAPVRQGGRLFNAAIVLHRGRVLGVVPKSYLPNYREFY 152 Query: 125 EKRTFIS-----------GYSNDPI---------VFRDIRLGILICEDIWKNSNICKHLK 164 E+R F G + P + L + ICED+W + Sbjct: 153 ERRHFTPGLSVQGQSIRIGDEDAPFGTDLLFAAEDVEGLILHVEICEDMWMPVSPASLGA 212 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+ SP + R + +Y G+ +L +DG + Sbjct: 213 LNGATVLANLSGSPITIGRADSRALLSRSASMRCVAATVYAAAGWGESTTDLAWDGQATI 272 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQ-----------------------LSQWNYMSD 259 ++ L + F+++ M D + + + D Sbjct: 273 YEN-GTLLAETPRFAQEATMAVADIDPGLLMQERMRVHGFEENRHAMAGAAMRRIGFRLD 331 Query: 260 DSASTMYIPL----------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + + + Q+ YN V L + K++IG+SGG+ Sbjct: 332 PPSRDLGLRRRVERFPFVPADPARLAQDCYEAYNIQVRGLAQRLSAAKIGKLVIGVSGGL 391 Query: 304 DSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS +A A+ + ++ +P T ++ +A A + LG L I Sbjct: 392 DSTHALIVAARAMDVLQRPRSDILAYTMPGFATGDETRNNALALMRVLGVSAHELDIRPA 451 Query: 359 VNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + E+ I EN+Q+ +R + L L+N ++L T + SE+++G+ Sbjct: 452 ARQMLADLEHPFAGGEQVYDITFENVQAGLRTDYLFRLANQHNGIVLGTGDLSELALGWC 511 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD +N + KT + L W G S VI +IL S EL P Sbjct: 512 TYGVGDQMSHYNVNAGVPKTLIQHLIRWAGGSGDFS---DEARVIFEAILNTEISPELIP 568 Query: 476 ------HQTDQESLPPYPILDDIIKRIVE-----NEESF-------------------IN 505 Q+ + ++ PY + D + ++ ++ +F ++ Sbjct: 569 VAKGEKPQSTEGTIGPYALHDFTLFHVLRYGFRPSKIAFLAWHAWHDAQQGVWPPNYPLD 628 Query: 506 NDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP 550 + Y+ +R S++KR P G KI+ A S D P Sbjct: 629 QRRSYDLADIRQWMQVFLKRFFGFSQFKRSALPNGPKISAGGALSPRGDWRAP 681 >gi|301064187|ref|ZP_07204630.1| NAD+ synthase [delta proteobacterium NaphS2] gi|300441632|gb|EFK05954.1| NAD+ synthase [delta proteobacterium NaphS2] Length = 685 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 135/661 (20%), Positives = 239/661 (36%), Gaps = 114/661 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+ + V D A N+A R A+ L+LF E+ S Y EDL + + + Sbjct: 14 IRSAVCVPSLRVADPAYNMACTLRLARRASDHHAALVLFPEMGFSAYTNEDLFHQDALLD 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A ++ ++ D ++VG P + Q + N +++ G ++ + K LPNY E++ Sbjct: 74 AVRINLEEFIEESRDLSPVLLVGAPLRFQGKLFNCALVIYHGEVLGIVPKTYLPNYREYY 133 Query: 125 EKRTFISG---------YSNDPIVF-----------RDIRLGILICEDIWKNSNICKHLK 164 EKR F+S + + F L + ICED+W + Sbjct: 134 EKRQFVSARCALESMVRFQGQFVPFGNNLIFEAENLEGFSLHVEICEDMWVPIPPSAYGA 193 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +++AS K R + Q + +Y G+ +L +DG + Sbjct: 194 LAGATVLANMSASNITVGKTDYRRMLCVSQSAKCVSAYLYSAAGYGESTTDLAWDGYAMI 253 Query: 223 FDGQQQLAFQMK-HFSEQNFMTEWHYDQQLSQWNY----------MSDDSASTMYIPLQ- 270 + Q LA + EQ + ++ + A+ IP Sbjct: 254 CENQVLLAETDRFQTEEQIIFADIDLERLQQDRMRTTSFQDSVMEHRERLAAMHRIPFNF 313 Query: 271 ----------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 YN V L + KV+IG+SGG Sbjct: 314 NVPLNMLPLERNISRFPFVPDETSARDDRCYEVYNIQVQGLMKRMSAAGVKKVVIGVSGG 373 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A + ++++ +P TS + +A ALG + I Sbjct: 374 LDSTQALIVAAKTMDRLGLPRDHILGYTMPGFATSETTRNNAGRLMDALGVTAREIDIRP 433 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 F + E+ + EN+Q+ R L L+N A++L T + SE+++G+ Sbjct: 434 ACQQVFKDIVHPFAEGEKVYDVTFENVQAGQRTAHLFRLANFHNAIVLGTGDLSELALGW 493 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL- 473 T GD +N + KT + L W + G S T + +I E S EL Sbjct: 494 STYGVGDQMSHYNVNGSVPKTLIHHLIRWVANTGQFS---KETGAVLTAIAETEISPELV 550 Query: 474 --------RPHQTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ------------ 508 +P Q + ++ PY + D + I ++ +F+++ Sbjct: 551 PDDHGDPAKPSQKTESAIGPYELQDFNLYYITRFGFRPSKVAFLSHYAWSDRNRGIWPEM 610 Query: 509 -------EYNDETVRYVE-----HLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISN 553 EY+ ++ S++KR P G K+ + S D P + Sbjct: 611 LPKTQRHEYHIPAIKKWLRIFLHRFFKTSQFKRSALPNGPKVGSGGSLSPRGDWRAPSDS 670 Query: 554 K 554 + Sbjct: 671 E 671 >gi|254232573|ref|ZP_04925900.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis C] gi|254365215|ref|ZP_04981261.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis str. Haarlem] gi|289746221|ref|ZP_06505599.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis 02_1987] gi|289751045|ref|ZP_06510423.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T92] gi|289754547|ref|ZP_06513925.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis EAS054] gi|13882232|gb|AAK46810.1| NH(3)-dependent NAD(+) synthetase, putative [Mycobacterium tuberculosis CDC1551] gi|124601632|gb|EAY60642.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis C] gi|134150729|gb|EBA42774.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis str. Haarlem] gi|289686749|gb|EFD54237.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis 02_1987] gi|289691632|gb|EFD59061.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T92] gi|289695134|gb|EFD62563.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis EAS054] gi|326904053|gb|EGE50986.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis W-148] Length = 738 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 137/668 (20%), Positives = 257/668 (38%), Gaps = 114/668 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 71 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 130 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 131 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 190 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R G + L + ICED++ Sbjct: 191 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 250 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 251 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 310 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ-------------------------LSQWNYMS 258 + L + + F + + D + + ++ Sbjct: 311 EN-GALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFAL 369 Query: 259 DDSA----------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D A ++P Q+ YN V L ++ ++ KV+IG+SGG Sbjct: 370 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGG 429 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T + +A A+ALG + + I D Sbjct: 430 LDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGD 489 Query: 358 LVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G+ Sbjct: 490 TARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGW 549 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 550 STYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPELI 606 Query: 475 PH-----QTDQESLPPYPILDDIIKRIVE-----NEESFIN------------------- 505 P Q+ + + P+ + D + +++ ++ +F+ Sbjct: 607 PTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKS 666 Query: 506 NDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK- 554 Y+ +R+ V+ S++KR P G K++ A S D P +S + Sbjct: 667 ERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARI 726 Query: 555 FRDHISEE 562 + D I E Sbjct: 727 WLDQIDRE 734 >gi|256394350|ref|YP_003115914.1| NAD+ synthetase [Catenulispora acidiphila DSM 44928] gi|256360576|gb|ACU74073.1| NAD+ synthetase [Catenulispora acidiphila DSM 44928] Length = 680 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 124/651 (19%), Positives = 229/651 (35%), Gaps = 110/651 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V+ D N +G+ + +F EL ++GY EDL+ + + Sbjct: 13 RVAACTGHTVIADPRANGQAVLHLARRCAEEGVAIAVFPELCLTGYSIEDLLLQDVVLDE 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ + + T D +V G P + + + N V++ G ++ V K PNY EF+E Sbjct: 73 VEDAVQEIAAATADLLPVLVFGAPLRYRNRIYNCAVVVHRGRVLGVVPKSYPPNYREFYE 132 Query: 126 KRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 +R SG + + L ICED+W Sbjct: 133 RRQIASGEDERGGSITIAGQSVPFGVDVLFEAEDVPGLVLHAEICEDMWVPVPPSAQAAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 193 AGATVLVNLSGSPITVGRAEDRRLLCRSASARCLAAYVYAAAGLGESSTDLSWDGQTMIY 252 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + L + F + + D L + M + Sbjct: 253 EN-GALLAETGRFPLGDAVAVADVDLDLLRQERMRMGTFDDNRRANDGKTNDFRRVGFLL 311 Query: 262 -------------ASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++P + YN V +L+ + KV+IG+SGG Sbjct: 312 DPPSADLGLRRAVERYPFVPADPDRLALDCYEAYNIQVTALQQRLAAIGGPKVVIGVSGG 371 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ + ++ +P T + +A ++LG L I Sbjct: 372 LDSTHALIVAARAMDRAGRPRSDILAFTMPGFATGEHTKGNAHKLMRSLGVTAAELDITS 431 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 M E + EN+Q+ +R + L L+N ++L T + SE+++G+ Sbjct: 432 TARLMLKEMDHPFGSGEPVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELALGW 491 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + K+ + L W G T +IL+ S EL Sbjct: 492 CTYGVGDQMSHYNVNSGVPKSLIQHLIRWVVGSGQFDEETGQT---LLAILDTEISPELV 548 Query: 475 PH---QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ------------------ 508 P Q+ ++ + PY + D + ++ + + +F+ Sbjct: 549 PGEELQSTEDKIGPYALHDFTLYYVLRHGFRPSKIAFLAWHAWHDVNAGAWPSNYPAAKR 608 Query: 509 -EYNDETVRYVEHLLYG-----SEYKRRQAPVGTKI---TAKSFGRDRLYP 550 Y+ E +R+ +++KR P G K+ + S D P Sbjct: 609 VGYDLEQIRHWLEYFCRRYFAFAQFKRSAMPNGPKVLAGGSLSPRGDWRAP 659 >gi|293374266|ref|ZP_06620594.1| NAD+ synthetase [Turicibacter sanguinis PC909] gi|325844815|ref|ZP_08168267.1| NAD+ synthase [Turicibacter sp. HGF1] gi|292647099|gb|EFF65081.1| NAD+ synthetase [Turicibacter sanguinis PC909] gi|325489002|gb|EGC91390.1| NAD+ synthase [Turicibacter sp. HGF1] Length = 641 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 142/644 (22%), Positives = 248/644 (38%), Gaps = 87/644 (13%) Query: 1 MLKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVF 58 M+K +K+ + VG+ N+ +A E A ++ + +++F EL +SGY DL+ Sbjct: 1 MIKNGFIKVGTSSPRVSVGNPIANVEVMLKALEVAKQKQLGILVFPELSVSGYTCGDLLL 60 Query: 59 KKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 + +Q + AI+ L G +VVG P + N V++ I+ + K LP Sbjct: 61 QTYLLQDVNRAIELLLEKNPFDGI-VVVGAPISIHRNLYNCAVVIQKNEILGIIPKYYLP 119 Query: 119 NYSEFHEKRTFISGYS-----------NDPIVFRD---------IRLGILICEDIWKNSN 158 N SEF+E R F G+ N + F D + + IC D+W S+ Sbjct: 120 NDSEFYEGRWFTRGHEIVRHFDEINYLNRTVPFGDLIFENELHNVSFAVEICLDLWVASS 179 Query: 159 ICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIF 216 L GA+ + +L+ S K + R ++V Q S + +Y + + + +F Sbjct: 180 PSSRLALNGADIILNLSTSNELFQKSRYRRDLVRVQSSKLVSGYVYCSSGVYESTTDGVF 239 Query: 217 DGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAST------------ 264 G S + L ++ MT D Q+N Sbjct: 240 SGHSIISQIGEILTESELFSRDELNMTIADIDVSRIQFNRRRSTPFRQSGEDNMAYVQRV 299 Query: 265 -------------------MYIPLQEEEADY----NACVLSLRDYVQKNNFHKVIIGLSG 301 ++P EE+ + N V L + ++IG+SG Sbjct: 300 PFTLVVNDEYTFEKPLDETPFVPKVEEKESFEEIMNIQVAGLAKRMIHTKAQTLLIGVSG 359 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS L +A ++N+ + TS ++ +A K LG + + + Sbjct: 360 GLDSTLALLLAAKTFDLINLPRKNIIAYTIRGFGTSNRTNTNANNLMKTLGVTHHDIDLR 419 Query: 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + V F + + I EN Q+R R NILM L+N ++L T N SE+++G+ Sbjct: 420 ESVLSHFKTIGHDPNQ--VDITYENAQARERTNILMNLANKMNGLVLGTGNMSELALGWC 477 Query: 417 TLYGDMSGGFNPLKDLYKTQVFQLASWR-----NSHGITSGLGPLTEVIPPSILEKSPSA 471 T GD + + KT V + + + L + IL+ S Sbjct: 478 TYNGDHMSMYAINAGVPKTLVKFMVKQFMLLESATLTNNAEDAELLQYTLADILDTPISP 537 Query: 472 ELR-PHQTDQESLPPYPILDDIIKRIVENEES--------FINNDQEYND----ETVRYV 518 EL Q +E + Y I D I+ ++ N ++ I ++++ E ++ Sbjct: 538 ELLNTEQNTEEIIGKYEIHDFILYHMLNNGDTEDRIFDLMKIAFKDDFDEEKLLEYLQIF 597 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFG--RDRLYPISNKFRDHIS 560 Y ++KR P G K+ S D P ++R +S Sbjct: 598 YRRFYSQQFKRSALPDGPKVLDISLSPRTDWRMPSDAEYRRRLS 641 >gi|317126459|ref|YP_004100571.1| NAD+ synthetase [Intrasporangium calvum DSM 43043] gi|315590547|gb|ADU49844.1| NAD+ synthetase [Intrasporangium calvum DSM 43043] Length = 680 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 132/665 (19%), Positives = 234/665 (35%), Gaps = 115/665 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L V D A N + +G + +F EL ++GY +DL+ + + A Sbjct: 13 RVAACTLPVAVADPARNADAVLEQARACSDEGAAVAIFPELCLTGYAIDDLLLQDPLLDA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI L + + +VVG P V N V++ G I+ V K LP Y EF+E Sbjct: 73 AEEAIARLVEASAELLPVLVVGAPLVRGARVFNCAVVIHRGAILGVAPKAYLPTYREFYE 132 Query: 126 KRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 +R F +G LG+ +CED+W Sbjct: 133 RRHFGAGDDQRGQTIEVAGWSVPFGTDLLFRATDLEGFVLGVEVCEDMWIPVPPSAEAAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +++ SP + + RH + +Y G+ +L +DG + + Sbjct: 193 AGATILVNISGSPITVGRAEDRHLLCRSASVRCLSAYLYAAAGEGESTTDLSWDGQTMIY 252 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + + L + + F + + D + + M + Sbjct: 253 E-RGTLLAETERFPDGPRRSVADIDLDMLRQERMRMGTFDDNRRTLTDRVSGFRTVEFEV 311 Query: 262 -------------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++P E YN V L ++ +++IG+SGG Sbjct: 312 GPPGGDIGLMRKVDRFPFVPDDEARLALDCYEAYNIQVSGLEQRLRAIGQPRIVIGVSGG 371 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ + ++ +P TS + ++A ++LG ++ L I Sbjct: 372 LDSTHALIVAAKAMDRLGRPRSDILAFTMPGFATSAHTKDNAIRLMESLGVTWEELDIRP 431 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 M EE + EN+Q+ +R + L ++N ++L T + SE+++G+ Sbjct: 432 AATEMLKGMDHPFARGEEVYDVTFENVQAGMRTDFLFRIANQRGGIVLGTGDLSELALGW 491 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD + + KT + L W S T SIL + EL Sbjct: 492 STYGVGDQMSHYGVNAGVPKTLMQHLIRWVVSSAQFEEHVNAT---LLSILATEITPELI 548 Query: 475 PH------QTDQESLPPYPILDDIIKRIVE-----------------NEES-------FI 504 P Q+ Q + PY + D + ++ + ES Sbjct: 549 PAKEGEKPQSTQAQIGPYSLQDFNLYHVLRWGYRPSKIAFLSWHAWHDAESGDWPAGYPA 608 Query: 505 NNDQEYNDETVRYV----EHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPIS---NK 554 EY+ T+R + +++KR P G K+ + S D P Sbjct: 609 AERAEYDLATIRRWLEVFLRRFFANQFKRSALPNGPKVAAGGSLSPRGDWRMPSDASGAA 668 Query: 555 FRDHI 559 + D + Sbjct: 669 WLDEL 673 >gi|323138562|ref|ZP_08073630.1| NAD+ synthetase [Methylocystis sp. ATCC 49242] gi|322396196|gb|EFX98729.1| NAD+ synthetase [Methylocystis sp. ATCC 49242] Length = 683 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 143/654 (21%), Positives = 248/654 (37%), Gaps = 108/654 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D A N+A+ EA+++G LILF EL +S Y +DL+ + + + Sbjct: 14 IRAAVACPRVRVADPAFNVARTIEMAREADQRGASLILFPELGLSAYAIDDLLQQDALLA 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ L + IVVG P + + + N + + G ++AV KI LPNY EF+ Sbjct: 74 AVEAALRELIEVSRALHPLIVVGAPLRHRGRLYNCAIAILRGRVLAVTPKIYLPNYREFY 133 Query: 125 EKRTFISG----------------YSNDPI----VFRDIRLGILICEDIWKNSNICKHLK 164 E+R F SG + +D + F ++ + + +CED+W Sbjct: 134 ERRHFASGAFVAGEEISVAGQIAPFGSDVLLEAGDFDNLVVHMEVCEDVWVPIPPSSRAA 193 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K R + + +Y G+ +L +DG + Sbjct: 194 LAGATVLLNLSASNAIVGKSDHRQILCAAHSARCLSAYLYSAAGQGESTTDLAWDGEAMI 253 Query: 223 FDGQQQLAFQMKHFSEQNFM----------------------------------TEWHYD 248 + Q LA + E + E+ Sbjct: 254 HENGQLLAKAPRFSDEPQLVLADIDLGRLVAERARQVTFGDCADVEAGATQFRRVEFELA 313 Query: 249 QQLSQWNYMSDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + D ++P E +N L ++ KV+IG+SGG Sbjct: 314 APRDRDLGFMRDVPRFPFVPNDETRLAELCFEAFNIQSHGLEQRLRATRMQKVVIGVSGG 373 Query: 303 IDSALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +AV A+G +EN+ LP T+ ++ +A +ALG + + Sbjct: 374 LDSTHALLVAVTAMGRLGLPRENILGYTLPAFATTDRTKSNAWRLMQALGVSAQEIDVSA 433 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 S + + EE EN+Q+ R ++L L+N A+++ T + SE+++G+ Sbjct: 434 ACTQMLSDIGHPVARGEEIYDATYENVQAGARTSLLFRLANQHDAIVIGTGDLSELALGW 493 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W G T + +L S EL Sbjct: 494 CTYGVGDQMSHYNVNASVPKTLIQHLIRWCARDAR---FGAETVAVLEDVLATEISPELI 550 Query: 475 PH---QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ------------------ 508 P Q + + PY + D + I + +F+ Sbjct: 551 PGETAQRTEAFVGPYALQDFNLYYITRFGFGPAKVAFLAWRAWRDAESGVWPSVIAQSDR 610 Query: 509 -EYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISN 553 Y+ +++ V S++KR P G K++ + S D P + Sbjct: 611 CAYDLAEIKHWLTVFVRRFFATSQFKRSALPNGPKVSSGGSLSPRGDWRAPSDS 664 >gi|163846947|ref|YP_001634991.1| NAD synthetase [Chloroflexus aurantiacus J-10-fl] gi|222524771|ref|YP_002569242.1| NAD synthetase [Chloroflexus sp. Y-400-fl] gi|163668236|gb|ABY34602.1| NAD+ synthetase [Chloroflexus aurantiacus J-10-fl] gi|222448650|gb|ACM52916.1| NAD+ synthetase [Chloroflexus sp. Y-400-fl] Length = 697 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 141/658 (21%), Positives = 239/658 (36%), Gaps = 112/658 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A + + N + A +G L+LF EL IS Y +DL + + + A Sbjct: 14 RLAVAIPAVRIAEPVFNAERTIALARRAAAEGAILVLFPELGISAYSNDDLFQQSTLLDA 73 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ T+ + +D A ++VG P + + + N V + G II V K LPNY EF+E Sbjct: 74 VEQALLTIAAAANDINALLLVGAPLRHEGRLFNCAVAIYRGQIIGVTPKSYLPNYREFYE 133 Query: 126 KRTFISGYSN--------------------DPIVFRDIRLGILICEDIWKNSNICKHLKK 165 KR F + D + + + ICED+W Sbjct: 134 KRHFAAARDAIGDTIQLAGQNVPFGTDVIYDVTTLPGLAVHVEICEDLWTPLPPSTFAAL 193 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K R + Q + +Y G+ +L +DG + Sbjct: 194 AGATVLCNLSASNITIGKADYRRALCMNQSARTLAAYLYSAAGPGESTTDLAWDGHALIC 253 Query: 224 DGQQQLAFQMKHFSEQNFM-TEWHYDQQLSQWNYMSDDS--------------------- 261 + + LA + E+ + + ++ L + + S Sbjct: 254 ENGELLAESQRFCDEEQIIFADVDLERLLQERARQTSFSDSIGDYRSHVRHMRRIPLAIT 313 Query: 262 -----------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 A ++P YN + L ++ KV+IG+SGG+D Sbjct: 314 LPVVTDLRRSVARFPFVPNDPATRDERCYEAYNIQMHGLMQRMRSAGVEKVVIGVSGGLD 373 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S +A + ++NV +P TS Q+ +A A ALG + I Sbjct: 374 STQALIVAARTMDRLGLPRQNVLAYTMPGFATSSQTRRNAHALMTALGVSAHEIDIRPSA 433 Query: 360 NHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + E + + EN+Q+ R + L L+N+ A+++ T + SE+++G+ T Sbjct: 434 LQMLRDLGHPAGEGAAVYDVTFENVQAGERTSHLFRLANYHNAIVVGTGDLSELALGWCT 493 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL--- 473 GD +N + KT + L + G LG + SIL S EL Sbjct: 494 YGVGDQMAHYNVNASVPKTLIQHLIRYVIRSG---ELGDEANRVLESILATEISPELVPA 550 Query: 474 -----RPHQTDQESLPPYPILDDIIKRIVE------------------------NEESFI 504 +P Q +E + PY + D + I E Sbjct: 551 SSSDDKPAQRTEEIIGPYALQDFNLYYITRYGFRPGKVAFLAMHAWGNADVGAWPEGLPA 610 Query: 505 NNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 N + Y+ T+ + S++KR P G K+ + S D P + Sbjct: 611 NERRAYDLPTILHWLRVFLFRFFQISQFKRSAMPNGPKVGSGGSLSPRGDWRAPSDAR 668 >gi|309812477|ref|ZP_07706230.1| NAD+ synthase [Dermacoccus sp. Ellin185] gi|308433532|gb|EFP57411.1| NAD+ synthase [Dermacoccus sp. Ellin185] Length = 680 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 135/664 (20%), Positives = 245/664 (36%), Gaps = 112/664 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + D N A+ E + +G+ +F EL ++GY +DLVF+ + Sbjct: 13 RVAAVTHPVALADPTTNAARVLEVARELHDRGVAAAVFPELDLTGYSIDDLVFQDVLLDD 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +AI T+ + + VG P + + N V++ G ++ V K +LP Y EF+E Sbjct: 73 VLAAIKTIVDGSEGLTPVLAVGAPLRKGTRLFNCAVVIKDGEVLGVVPKSHLPTYKEFYE 132 Query: 126 KRTFISGYS---------------------NDPIVFRDIRLGILICEDIWKNSNICKHLK 164 KR + G + D+ + + +CED+W Sbjct: 133 KRWYAPGLDQRGQYIDLGDLGEVPFGPDLIFRAVDLPDLAIHVEVCEDVWVPIPPSSEAA 192 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+ SP K +R +V Q +Y G+ +L +DG + Sbjct: 193 AAGASVLMNLSGSPITIGKSSQRSLVVQSQSFRTLAAYVYAASGEGESTTDLAWDGQTMI 252 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYD---QQLSQWNYMSDDSASTMYIPL---------- 269 +D Q L + + F + D + ++ + S D P Sbjct: 253 YD-QGTLLAESERFPSGPRTSIADVDLGAIRQARMRFNSYDDNRPGIGPARPLREVPFEL 311 Query: 270 ---------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 Q+ Y V L ++ K++IG+SGG Sbjct: 312 GAPDGDRGLLREIERFPFVPADDAQLAQDCYEAYEIQVSGLEQRMRSIGAPKIVIGVSGG 371 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ + ++ +P TS + +A A+ALG ++ + I Sbjct: 372 LDSTHALIVAARAMDRVGRPRTDILAYTMPGFATSDHTKSNAYKLAEALGVTFEEVDIRP 431 Query: 358 LVNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + M E + EN+Q+ +R + L ++N ++L T + SE+++G+ Sbjct: 432 MATQMLKDMGHPAGSGEPVYDVTFENVQAGLRTDFLFRIANQKSGIVLGTGDLSELALGW 491 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD + + KT + L W S S + E + SIL+ S EL Sbjct: 492 CTYGVGDQMSHYGVNAGVPKTLMQHLIRWVASGDEFSA--EVGETLL-SILDTEISPELV 548 Query: 475 P------HQTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ-----------EYND 512 P Q+ Q+S+ PY + D + ++ + + +F+ + D Sbjct: 549 PTKEGEKPQSTQDSIGPYNLQDFTLYHVLTHGARPSKIAFLAMHAWQNADEGRWPSGFPD 608 Query: 513 E------------TVRYVEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISNKFRD 557 + + + ++KR P G K++ A S D P R Sbjct: 609 DERPAYSLAEIKKWLEVFHKRFFSQQFKRSALPNGPKVSAGGALSPRGDWRMPSDASSRA 668 Query: 558 HISE 561 ++E Sbjct: 669 WLAE 672 >gi|85374508|ref|YP_458570.1| NAD synthetase [Erythrobacter litoralis HTCC2594] gi|84787591|gb|ABC63773.1| hypothetical protein ELI_08405 [Erythrobacter litoralis HTCC2594] Length = 772 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 129/658 (19%), Positives = 224/658 (34%), Gaps = 113/658 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A D+ N +A+ +DL+++ EL +S Y +DL + + + Sbjct: 103 IRVATATPAVRTADVPFNRDGIIAEARKAHDLEVDLVVYPELCVSSYAIDDLHLQTAMLD 162 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ + T D +++G P + + N + L G ++ V K LPNY EF+ Sbjct: 163 ASEAAVGAIAQATRDLSPVLIIGAPLRRNGKIYNCALALSRGRVLGVVPKSFLPNYREFY 222 Query: 125 EKRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLK 164 EKR F G + + GI ICED W + Sbjct: 223 EKRHFAHGRNCQGLEIALNGERMPFGTDLIFAAHDLPGFTFGIEICEDFWSPNPPGTLAA 282 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 A L +L+ASP + RH + Y G+ +L +DG Sbjct: 283 LASATILANLSASPITIGRADDRHLHCRSSSARSICAYAYSASGFGESTTDLSWDGQGVV 342 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADY------ 276 ++ +L Q F + D Q M + + S E Y Sbjct: 343 YEM-GELMKQSTRFDLDTELCAVDIDIQRILAERMRNQTFSDAAEHEGRPEDWYRRIEFQ 401 Query: 277 -----------------------------------NACVLSLRDYVQKNNFHKVIIGLSG 301 N V +L ++ ++IG+SG Sbjct: 402 HAGTGGDTGLMRPIRRFPFVPNNRATLDEDCYEAFNIQVDALMRRIKATGPKSLVIGISG 461 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A + ++ +P TS + +A +A+ + + I Sbjct: 462 GLDSTHALIVAAKACDRLGLPRTTIRGYTMPGFATSDYTKSNAWKLMQAMEITAEEIDIK 521 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E EN+Q+ +R + L L+ K ++ T + SE+++G Sbjct: 522 PTARTMLENIGHAFADGEPVYDTTFENVQAGLRTDYLFRLAGQHKGFVVGTGDLSELALG 581 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD + + KT + L W T P + +IL+ S EL Sbjct: 582 WCTYGVGDHMSHYGVNAGVPKTLIQYLIRW---TIETEQFVPECSAVLGAILDTEISPEL 638 Query: 474 RPH------QTDQESLPPYPILDDIIKRIVENEES------------------------F 503 P Q+ + ++ PY + D + IV +S Sbjct: 639 VPAGEDGEIQSTESTIGPYELNDFFLHHIVRYGQSPSKVAFLAWHAWKDIEAGEWPEGFP 698 Query: 504 INNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISN 553 + Y+ T+R+ S++KR P G K++ A S D P Sbjct: 699 EDRKNAYDLATIRHWLEKFLWRFFQFSQFKRSALPNGPKVSSGGALSPRGDWRAPSDA 756 >gi|227872480|ref|ZP_03990820.1| NAD(+) synthase (glutamine-hydrolyzing) [Oribacterium sinus F0268] gi|227841681|gb|EEJ51971.1| NAD(+) synthase (glutamine-hydrolyzing) [Oribacterium sinus F0268] Length = 656 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 129/645 (20%), Positives = 246/645 (38%), Gaps = 103/645 (15%) Query: 1 MLKKLKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKK 60 M +++A A V D N+ + +A + + L+++ EL ++ Y D+++++ Sbjct: 1 MRDFVRVATACPKGRVADPEYNLEQMLILARKAEEENVSLLVYPELCLTSYTAMDMIYQR 60 Query: 61 SFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNY 120 S ++A A+ + T + V+G+ + + N+ V+ G+I+ + K +PN+ Sbjct: 61 SLLEAGEKALISFCEQTKEMDVLFVIGYGLLLEGKLFNTGVVTYHGDILGIVPKQFIPNH 120 Query: 121 SEFHEKRTFISGYSNDPIV-------------------------FRDIRLGILICEDIWK 155 +EF+E+R F G + + RL + ICED+W Sbjct: 121 AEFYERRYFQEGKEEVCFIPNILKGEGYRKEIPFGASLHFVREEDQRFRLAVEICEDLWV 180 Query: 156 NSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--E 213 GA L + +AS K R ++ ++H +Y + + + Sbjct: 181 PVPPSSKHALAGATLLANCSASDELVGKRGSRRRLLEHYSGNLHASYLYSSAGPSESTQD 240 Query: 214 LIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHY-----DQQLSQWNYMSDDSASTMYIP 268 ++F + + L F E F + + ++ ++ ++ + T Y Sbjct: 241 MVFSAHCLISENGRILKENQP-FEEGIFWADVNLALLEGERMRQSTYFVKEEPSYTQYFS 299 Query: 269 LQEEEADYNACVL-------------------------SLRDYVQKNNFHKVIIGLSGGI 303 +++++ + V L+ ++ K+I+GLSGG+ Sbjct: 300 MKDKQYTLHRFVSPCPFLPKAVEKEGDRAREILSIQSRGLKKRMEHVGCKKLILGLSGGL 359 Query: 304 DSALCAAIAVD-----ALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L + ++ KEN+ I +P TS ++ + A AKALG + I Sbjct: 360 DSTLALFVCLETFALLGYDKENILCITMPSFGTSKKTHDSAEKLAKALGISLREISIEKA 419 Query: 359 VNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 V F + E IV EN Q+R R ILM L+N A+L+ T + SE+++G+ T Sbjct: 420 VLQHFFDIGH--DGEKKDIVYENAQARERTQILMDLANKEGALLVGTGDLSELALGFATY 477 Query: 419 YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP--- 475 GD + D+ KT + L L E + I+ S EL P Sbjct: 478 NGDHMSMYGVNGDIPKTAIPMLLREFARKSGNQEL----ETVVEEIIATPVSPELLPPDA 533 Query: 476 ----HQTDQESLPPYPILDDIIKRIV-------------------------ENEESFINN 506 Q ++ + PY + D + + + ENE + Sbjct: 534 TGEISQRTEDVVGPYLLQDFFLYQHLRYGFSARNIYDLACFAFSKENLANKENERTIPEF 593 Query: 507 DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLY 549 + ++ +G+++KR P G K+ + D Sbjct: 594 SPAEILKNLKTFYKRFFGNQFKRSCLPDGPKVGRVALSPRGDLRM 638 >gi|315499307|ref|YP_004088111.1| nad+ synthetase [Asticcacaulis excentricus CB 48] gi|315417319|gb|ADU13960.1| NAD+ synthetase [Asticcacaulis excentricus CB 48] Length = 679 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 132/660 (20%), Positives = 246/660 (37%), Gaps = 109/660 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A + + N+++ A+ G D+++F EL ++GY +DL + + + Sbjct: 17 VRVACATPKVQIANPKANLSEHLSVAARADAAGADVVVFPELSLTGYTLDDLFLQDALLD 76 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A ++++ L + +V G P + + + N +L G I+ + K LPNY EF+ Sbjct: 77 AAKASLEALVQASKAWRTIVVCGVPLRIEGVLYNCAAVLHHGQILGLVPKTFLPNYREFY 136 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 EKR F SG + + F LG+ ICED+W +L Sbjct: 137 EKRWFGSGQDLNTQLEIAGQSVRVTPHQIFQARGFESFALGVEICEDMWSPQTPSTNLAL 196 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 +GA + +L+ASP K + R I + + G+ +L +DG S + Sbjct: 197 KGATLVVNLSASPVTVGKSRVRKRICEATSERLMCAYAFTASGPGESTTDLAWDGQSLIY 256 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSA--------------------- 262 + + LA + S+ + + ++ + Sbjct: 257 ELGELLAEGERFLSDTLTIADVDVERIQQERLRTGTFRDAGHITSGAEVSRHLFTHLPHT 316 Query: 263 ---------STMYIPL------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL 307 Y+P ++ +N V L ++ V+IG+SGG+DS Sbjct: 317 LSDFYRLVDRFPYVPNARERLDEDCFEAFNIQVHGLMRRIESTGAKSVVIGVSGGLDSTH 376 Query: 308 CAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 +A A + ++ +P T+ S DA +ALG + + I Sbjct: 377 ALIVACKAFDRLGLPRAQIRGYTMPGFGTTSGSKSDAHKLMRALGVSAEEIDIRPASKRM 436 Query: 363 FSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-Y 419 + E +V EN+Q+ +R + L L+ ++ T + SE+++G+ T Sbjct: 437 LIDIGHPYGKGEPVYDVVFENVQAGLRTDFLFRLAGQHNGFVVGTGDLSELALGWCTYGV 496 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---- 475 GD +N KT + L W + G + S+LE+ S EL P Sbjct: 497 GDHMSHYNVNCGAPKTLIQHLIRWAARTEFDAKAGR----VLRSVLEREISPELVPVQNG 552 Query: 476 -HQTDQESLPPYPILDDIIKRIVE----------------NEESFINNDQEYND------ 512 Q ++ + PYP+ D + + E+ + +Y Sbjct: 553 QAQRTEDKVGPYPLQDFTLYYLTRYGLKPSKIAFLQYHAWKNEALGDWPPDYPQAERRAY 612 Query: 513 ---ETVRYVE----HLLYGSEYKRRQAPVGTK-ITAKSFGR--DRLYPI---SNKFRDHI 559 E +++E S++KR P G K I+ + D P ++ + D + Sbjct: 613 TLSEIRKWMEVFLFRFFTISQFKRSAVPNGPKLISGGALSPRGDWRAPSDGDASLWLDEL 672 >gi|119716275|ref|YP_923240.1| NAD synthetase [Nocardioides sp. JS614] gi|119536936|gb|ABL81553.1| NAD+ synthetase [Nocardioides sp. JS614] Length = 681 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 139/657 (21%), Positives = 240/657 (36%), Gaps = 113/657 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V D A N + + +G+ + +F EL +SGY +DL + + A Sbjct: 13 RVAACTVPIRVADPATNARAVLEQAQACSDEGVAVAIFPELCLSGYALDDLFLQDVLLDA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + I L + + +VVG P VLN+ V++ G I+ V K LP Y EF+E Sbjct: 73 VADEIAGLVAASEGLLPVLVVGAPVAHGSRVLNAAVVIHRGRILGVAPKSYLPTYREFYE 132 Query: 126 KRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 +R F G + R + L + +CED+W Sbjct: 133 RRWFAPGDDVRGSMVLAGQEVPVGPDLLFEAEDVRGLVLHVEVCEDMWVPVPPSAEAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +++ SP + RH + S +Y G+ +L +DG + ++ Sbjct: 193 GATVLANISGSPITVGRASDRHLLARSASSRCLAAYLYAAGGQGESTTDLSWDGQTMVYE 252 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS----------------------- 261 +L + + F + D ++ + + Sbjct: 253 -HGELLAETERFPDGPRAAIVDLDLDRTRLERLRTGTFDDNRRTIGPEFRTVDFELGPPT 311 Query: 262 ---------ASTMYIPL------QEEEADYNACVLSLRDYVQKN-----NFHKVIIGLSG 301 ++P Q+ YN V L + KV+IG+SG Sbjct: 312 KDIGLRRKVDRFPFVPDDAERLAQDCYEAYNIQVSGLEQRLSAIGEGHVGQPKVVIGISG 371 Query: 302 GIDSAL---CAAIAVDALGKEN--VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS AA A+D LG++ + LP T + A A A +LG + I Sbjct: 372 GLDSTHALIVAAKAMDRLGRDRSEILGFTLPGFATGEATKGYAWALADSLGITMQEIDIT 431 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 D + + EE I EN+Q+ +R + L L+NH ++L T + SE+++G Sbjct: 432 DAARAMLTDLDHPYAKGEEVYDITFENVQAGLRTDYLFRLANHRGGIVLGTGDLSELALG 491 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W S G T + ++ + + EL Sbjct: 492 WCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISTG---QFDESTNAVLLDVVGQEITPEL 548 Query: 474 RP------HQTDQESLPPYPILDDIIKRIVENEES------------------------F 503 P Q+ +ES+ PY + D + ++ + Sbjct: 549 IPTREDHLPQSTEESVGPYSLQDFTLFHVLRYGYAPSKIAFLAWHAWHDADAGEWPPNYP 608 Query: 504 INNDQEYNDETVRYVE----HLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISN 553 + E++ T+R + S++KR P G K++ S D P Sbjct: 609 DDRRIEFDLATIRRWLEVFVRRFFASQFKRSALPNGPKVSHGGTMSPRGDWRMPSDA 665 >gi|145223229|ref|YP_001133907.1| NAD synthetase [Mycobacterium gilvum PYR-GCK] gi|315443687|ref|YP_004076566.1| NAD+ synthetase [Mycobacterium sp. Spyr1] gi|145215715|gb|ABP45119.1| NAD+ synthetase [Mycobacterium gilvum PYR-GCK] gi|315261990|gb|ADT98731.1| NAD+ synthetase [Mycobacterium sp. Spyr1] Length = 680 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 139/665 (20%), Positives = 254/665 (38%), Gaps = 112/665 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + + D A N R E + + L +F EL +SGY ED+V + + ++ Sbjct: 12 VRVAACTQHVAIADPAANAESVLRMARECHHDHVGLAVFPELTLSGYSIEDIVMQDALLE 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A AI + + + D +VVG P + + V N+ V++ G I+ V K LP Y EF+ Sbjct: 72 AVREAILEVAAGSADLLPVLVVGAPLRFRHRVYNTAVVIHRGRILGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 EKR +G + L + ICED++ Sbjct: 132 EKRQIAAGDDESGEIRLGGADVPFGPDLLFEATDVPGFVLHVEICEDMFVPVPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + S +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRSLLARSASSRCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD--------------QQLSQWNYMSDDSASTMYIP- 268 + L Q + F + + D + + + +DS + Sbjct: 252 ENGVCL-AQSERFPKGERRSTADVDVELLLNERLRMGTFDDNRRHHLIDEDSYRHISFVL 310 Query: 269 --------------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 Q+ YN V L ++ ++ KV++GLSGG Sbjct: 311 DPPDGDTGLMREVERFPFVPADPARLEQDCYEAYNIQVSGLEQRLRALHYPKVVLGLSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T ++ +A A+ALG ++ + I + Sbjct: 371 LDSTHALIVAARAMDREERPRSDILAFTLPGFATGERTRNNATRLAEALGVTFETIDITE 430 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + E+ + EN+Q+ +R + L L+NH ++L T + SE+++G+ Sbjct: 431 TAELMLKELGHPFSRGEKVYDVTFENVQAGLRTDYLFRLANHRGGIVLGTGDLSELALGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S ++ + + S+L+ S EL Sbjct: 491 STYGVGDQMSHYNVNGGVPKTLIQHLIRWVIS---SNQFDDVVNEVLQSVLDTEISPELV 547 Query: 475 PHQTDQES------LPPYPILDDIIKRIVE-----NEESFINNDQEYNDET--------- 514 P D+E + PY + D + +++ ++ +F+ ++ E Sbjct: 548 PAGEDEEIQSSQSKVGPYVLQDFSLFQVLRYGFRPSKVAFLAWHAWHDPERGDWPTGIPE 607 Query: 515 ----------VRYVE-----HLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISNKFR 556 +R+ S++KR P G K++A S D P R Sbjct: 608 DERPSYSLKEIRHWLQVFAQRFYSFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDMSAR 667 Query: 557 DHISE 561 + E Sbjct: 668 TWLDE 672 >gi|163747495|ref|ZP_02154846.1| hypothetical protein OIHEL45_19166 [Oceanibulbus indolifex HEL-45] gi|161379251|gb|EDQ03669.1| hypothetical protein OIHEL45_19166 [Oceanibulbus indolifex HEL-45] Length = 703 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 134/665 (20%), Positives = 230/665 (34%), Gaps = 112/665 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A D+A N A+ +DL++ EL +S Y +DL + + + Sbjct: 34 VRVATCTPRVRPADVAFNRDSLLEEMRRADTARVDLLVCPELSLSSYAIDDLHMQDALLN 93 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L T +++G P + + + N + + G ++ V K LPNY EF+ Sbjct: 94 AVEEALGALIEATAKMTPVVLLGAPLRREGRLYNCAIAISRGQVLGVVPKSYLPNYREFY 153 Query: 125 EKRTFISG-YSNDPIVFRDIR------------------LGILICEDIWKNSNICKHLKK 165 EKR F G ++ I R ICED+W + Sbjct: 154 EKRWFAHGRDTSGEITVAGRRVPFGDDLIFEATDLPGLIFHAEICEDLWTPAPPSADAAL 213 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH + Q +Y G+ +L +DG Sbjct: 214 GGALILANLSASNIVIGKSSDRHLLCRSQSMRAFAAYVYSAAGPGESTTDLAWDGQGMIH 273 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + L + F + +T D Q M S Sbjct: 274 EL-GDLLAESTRFPLEPELTIADVDCGRIQSERMRTGSFHDAARHRAPSFRRVTFTHQPH 332 Query: 262 ----------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 Y+P +E +N V LR + ++IG+SGG+DS Sbjct: 333 YENAGLQRPLRRFPYVPNRESHLDQDCYEAFNIQVEGLRRRFEATKSKTMVIGISGGLDS 392 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 +A ++ + +P TS + +A +A+G D + I Sbjct: 393 THALIVAAKTCDRMGLPRDCILGFTMPGFATSEGTKSNAWKLMRAMGITADEIDIRPAAR 452 Query: 361 HFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL 418 M E I EN+Q+ +R + L L+N + ++ T + SE+++G+ T Sbjct: 453 QMLEDMDHPFSDGEPVYDITFENVQAGLRTDYLFRLANQRQGFVIGTGDLSELALGWCTY 512 Query: 419 -YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH- 476 GD + + KT + L W + T+ + +ILE S EL P Sbjct: 513 GVGDQMSHYAVNTGVPKTLIQYLIRW---STRSGQFDAETDKVLDAILETEISPELVPAA 569 Query: 477 -----QTDQESLPPYPILDDIIKRIVENEES------------------------FINND 507 Q+ + + PY + D + + S Sbjct: 570 EGEDIQSTEAMIGPYELNDFFLYHTMRYGLSPSKVAFLAWHAWHDIEQGRWPDGFPQAKR 629 Query: 508 QEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP---ISNKFR 556 Y+ +T+R+ S++KR P G K++ A S D P ++ + Sbjct: 630 NAYDLQTIRHWLEKFLHRFFATSQFKRSALPNGPKVSAGGALSPRGDWRAPSDSVATPWL 689 Query: 557 DHISE 561 D + Sbjct: 690 DELRR 694 >gi|262196819|ref|YP_003268028.1| NAD+ synthetase [Haliangium ochraceum DSM 14365] gi|262080166|gb|ACY16135.1| NAD+ synthetase [Haliangium ochraceum DSM 14365] Length = 704 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 141/689 (20%), Positives = 248/689 (35%), Gaps = 137/689 (19%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D A N A+ A++Q ++LF EL +S Y EDL + + + Sbjct: 13 VRAAVAVPEVRVADPAFNAARTCELARRASQQHAAVLLFPELGLSAYSNEDLFHQDALLD 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 +A+ T+ + +++G P + + + N V + G I+ V K LPNY EF+ Sbjct: 73 GVLAALQTVLEASETLSPLLLLGAPLRFRGALFNCCVAVYHGRILGVTPKSYLPNYREFY 132 Query: 125 EKRTFISG----------------YSNDPI----VFRDIRLGILICEDIWKNSNICKHLK 164 EKR F + + ND + + ICED+W + Sbjct: 133 EKRQFTAARCALLEEVTLLGQTVPFGNDIVYEADSLPGFAVHAEICEDVWTPIPPSTYAA 192 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K R ++ +Y G+ +L +DG + Sbjct: 193 LAGATVLANLSASNITIGKADYRRDLCAAHSGRCVAAYLYSAAGPGESTTDLAWDGQALI 252 Query: 223 FDGQQQL-AFQMKHFSEQNFMTEWHYDQ-------------------------------Q 250 ++ L + H SEQ + ++ Sbjct: 253 YENDLLLAEAERFHPSEQLIFADVDIERLLQERMRLTSFQDTIADHGERVRAVRRVRFAF 312 Query: 251 LSQWNYMSDDSAS--------TMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVI 296 + +D A ++P + YN V L + K++ Sbjct: 313 QVPQDAQPEDRAPTLRRALDRFPFVPSDDAARDERCYEAYNIQVHGLLQRLASTGIDKLV 372 Query: 297 IGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYD 351 IG+SGG+DS +A + +EN+ +P TS ++L +A A ALG Sbjct: 373 IGVSGGLDSTHALIVAAKTMDRLDLPRENILAYTMPGFATSERTLRNAHALMSALGATAR 432 Query: 352 VLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKS 409 + I + + EE + EN+Q+ R + L L+NH+ ++L T + S Sbjct: 433 EIDIRPSCRQMLADLDHPFARGEEVYDVTFENVQAGERSSHLFRLANHNGGLVLGTGDLS 492 Query: 410 EISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKS 468 E+++G+ T GD +N + KT + L W +G+ L P + IL Sbjct: 493 ELALGWCTYGVGDQMSHYNVNASVPKTLIQHLVRWVADNGV---LNPAASEVLRDILATE 549 Query: 469 PSAEL-----------------------RPHQTDQESLPPYPILDDIIKRIVE-----NE 500 S EL P Q ++ + PY + D I + ++ Sbjct: 550 ISPELVPASSAADEDGSGDGQGGDARQSAPAQRTEDIIGPYELQDFHIYYLTRYGFRPSK 609 Query: 501 ESFI-------------------NNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGT 536 +F+ + + Y T++ S++KR P G Sbjct: 610 VAFLAHCAWGELERGDWPGGFAEEDRRAYERATIKKWLRVLLHRFFQVSQFKRSAMPNGP 669 Query: 537 KI---TAKSFGRDRLYPISNK---FRDHI 559 K+ + S D P ++ + D + Sbjct: 670 KVGSGGSLSPRGDWRAPSDSRAAVWLDEL 698 >gi|148823640|ref|YP_001288394.1| NAD synthetase [Mycobacterium tuberculosis F11] gi|253798482|ref|YP_003031483.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 1435] gi|289553770|ref|ZP_06442980.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 605] gi|289762607|ref|ZP_06521985.1| NAD synthetase [Mycobacterium tuberculosis GM 1503] gi|148722167|gb|ABR06792.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis F11] gi|253319985|gb|ACT24588.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 1435] gi|289438402|gb|EFD20895.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 605] gi|289710113|gb|EFD74129.1| NAD synthetase [Mycobacterium tuberculosis GM 1503] gi|328458250|gb|AEB03673.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis KZN 4207] Length = 738 Score = 412 bits (1059), Expect = e-112, Method: Composition-based stats. Identities = 137/668 (20%), Positives = 256/668 (38%), Gaps = 114/668 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 71 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 130 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 131 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 190 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R G + L + ICED++ Sbjct: 191 ELRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 250 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 251 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 310 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ-------------------------LSQWNYMS 258 + L + + F + + D + + ++ Sbjct: 311 EN-GALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFAL 369 Query: 259 DDSA----------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D A ++P Q+ YN V L ++ ++ KV+IG+SGG Sbjct: 370 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGG 429 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T + +A A+ALG + + I D Sbjct: 430 LDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGD 489 Query: 358 LVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G+ Sbjct: 490 TARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGW 549 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 550 STYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPELI 606 Query: 475 PH-----QTDQESLPPYPILDDIIKRIVE-----NEESFIN------------------- 505 P Q+ + + P+ + D + +++ ++ +F+ Sbjct: 607 PTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKS 666 Query: 506 NDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK- 554 Y+ +R+ V+ S++KR P G K++ A S D P +S + Sbjct: 667 ERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARI 726 Query: 555 FRDHISEE 562 + D I E Sbjct: 727 WLDQIDRE 734 >gi|227496377|ref|ZP_03926667.1| NAD(+) synthase (glutamine-hydrolyzing) [Actinomyces urogenitalis DSM 15434] gi|226834104|gb|EEH66487.1| NAD(+) synthase (glutamine-hydrolyzing) [Actinomyces urogenitalis DSM 15434] Length = 734 Score = 411 bits (1058), Expect = e-112, Method: Composition-based stats. Identities = 134/685 (19%), Positives = 242/685 (35%), Gaps = 141/685 (20%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D A N + +G+ L+ F EL ++GY +DL A Sbjct: 38 RVAAVTLPVHLADPAANARAMIEQARALDGEGVCLVAFPELSLTGYSVDDLFLSDVLATA 97 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 AI+ +++ + + +V+G P + + N V++ G ++ + K LP Y EF+E Sbjct: 98 VLEAIEQIRAASAELLPALVIGAPLRVGTRLYNCAVVIQGGRVLGIAPKSYLPTYREFYE 157 Query: 126 KRTFISGYS----------------------------------------------NDPIV 139 R F G + Sbjct: 158 GRYFACGTEIGVEHLTLPGVRDDAAPSSAPQPASAGAAQQAAGRGACVPFGADLLFEVPD 217 Query: 140 FRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVH 199 + + +CED+W GA L +++ SP + + R + + Sbjct: 218 VPGLTFHVEVCEDMWVPVPPSSLAALAGACVLVNISGSPITVGRAEDRELLARASSARNL 277 Query: 200 LPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD--------- 248 +Y G+ +L +DG +F ++ QL + F + T D Sbjct: 278 AAYVYAAAGQGESSTDLAWDGQTFVYEC-GQLLGSTERFPDGPRATVVDVDIESLAAERL 336 Query: 249 ----QQLSQWNYMSDDSASTMYIP----------------------------LQEEEADY 276 ++ ++D S + +P Q+ Y Sbjct: 337 RQGTFDDNRAALLTDASFRRIPVPGLRAPRTDIGLRRAVDRFPFVPDDPARLAQDCYEAY 396 Query: 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYT 331 N V +L +Q ++IG+SGG+DS +A A+ G+E++ I +P T Sbjct: 397 NIQVAALVQRMQAIGLPTIVIGVSGGLDSTHALIVAARAVDRLGLGREHIHAITMPGFAT 456 Query: 332 SPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQE-----EPSGIVAENIQSRI 386 S + +A A A+ALGC + L I + M E + EN+Q+ + Sbjct: 457 SEHTKSNALALARALGCHVEELDIRPAATQMLTEMGHPYGRGERGREVYDVTFENVQAGL 516 Query: 387 RGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRN 445 R + L ++ ++L T + SE+++G+ T GD +N + KT + L W Sbjct: 517 RTDFLFRIAGQRGGIVLGTGDLSELALGWCTFGVGDQMSHYNVNAGIPKTLIQHLIRWVV 576 Query: 446 SHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN 499 S + S + SIL+ S EL P Q+ Q + PY + D + ++ Sbjct: 577 SEKLFSDDAGR---VLLSILDTEISPELVPAADGEPIQSTQAKIGPYALQDFTLWHVLRR 633 Query: 500 -----EESFINNDQ-------------------EYNDETVRYVE----HLLYGSEYKRRQ 531 + +F+ Y+ T+R E + +++KR Sbjct: 634 GARPSKIAFLAEKAWADASTGLWPEGLPEEDRVSYDLATIRRWELLFLRRFFANQFKRST 693 Query: 532 APVGTKI---TAKSFGRDRLYPISN 553 P G K+ + S D P Sbjct: 694 LPNGPKVVAGGSLSPRGDWRMPSDA 718 >gi|224983478|pdb|3DLA|A Chain A, X-Ray Crystal Structure Of Glutamine-Dependent Nad+ Synthetase From Mycobacterium Tuberculosis Bound To Naad+ And Don gi|224983479|pdb|3DLA|B Chain B, X-Ray Crystal Structure Of Glutamine-Dependent Nad+ Synthetase From Mycobacterium Tuberculosis Bound To Naad+ And Don gi|224983480|pdb|3DLA|C Chain C, X-Ray Crystal Structure Of Glutamine-Dependent Nad+ Synthetase From Mycobacterium Tuberculosis Bound To Naad+ And Don gi|224983481|pdb|3DLA|D Chain D, X-Ray Crystal Structure Of Glutamine-Dependent Nad+ Synthetase From Mycobacterium Tuberculosis Bound To Naad+ And Don Length = 680 Score = 411 bits (1058), Expect = e-112, Method: Composition-based stats. Identities = 137/668 (20%), Positives = 257/668 (38%), Gaps = 114/668 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 13 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 73 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 132 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R G + L + ICED++ Sbjct: 133 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 193 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 252 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ-------------------------LSQWNYMS 258 + L + + F + + D + + ++ Sbjct: 253 EN-GALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFAL 311 Query: 259 DDSA----------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D A ++P Q+ YN V L ++ ++ KV+IG+SGG Sbjct: 312 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGG 371 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T + +A A+ALG + + I D Sbjct: 372 LDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGD 431 Query: 358 LVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G+ Sbjct: 432 TARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGW 491 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 492 STYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPELI 548 Query: 475 PH-----QTDQESLPPYPILDDIIKRIVE-----NEESFIN------------------- 505 P Q+ + + P+ + D + +++ ++ +F+ Sbjct: 549 PTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKS 608 Query: 506 NDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK- 554 Y+ +R+ V+ S++KR P G K++ A S D P +S + Sbjct: 609 ERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARI 668 Query: 555 FRDHISEE 562 + D I E Sbjct: 669 WLDQIDRE 676 >gi|31793618|ref|NP_856111.1| NAD synthetase [Mycobacterium bovis AF2122/97] gi|57116990|ref|NP_216954.2| NAD synthetase [Mycobacterium tuberculosis H37Rv] gi|121638320|ref|YP_978544.1| NAD synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662273|ref|YP_001283796.1| NAD synthetase [Mycobacterium tuberculosis H37Ra] gi|161350066|ref|NP_336996.2| NAD synthetase [Mycobacterium tuberculosis CDC1551] gi|215404376|ref|ZP_03416557.1| NAD synthetase [Mycobacterium tuberculosis 02_1987] gi|215412194|ref|ZP_03420958.1| NAD synthetase [Mycobacterium tuberculosis 94_M4241A] gi|215427824|ref|ZP_03425743.1| NAD synthetase [Mycobacterium tuberculosis T92] gi|215431386|ref|ZP_03429305.1| NAD synthetase [Mycobacterium tuberculosis EAS054] gi|215446685|ref|ZP_03433437.1| NAD synthetase [Mycobacterium tuberculosis T85] gi|224990814|ref|YP_002645501.1| NAD synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|260187447|ref|ZP_05764921.1| NAD synthetase [Mycobacterium tuberculosis CPHL_A] gi|260205744|ref|ZP_05773235.1| NAD synthetase [Mycobacterium tuberculosis K85] gi|289448082|ref|ZP_06437826.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis CPHL_A] gi|289575133|ref|ZP_06455360.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis K85] gi|289758570|ref|ZP_06517948.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T85] gi|294994452|ref|ZP_06800143.1| NAD synthetase [Mycobacterium tuberculosis 210] gi|298525918|ref|ZP_07013327.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis 94_M4241A] gi|306776709|ref|ZP_07415046.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu001] gi|306785235|ref|ZP_07423557.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu003] gi|306789594|ref|ZP_07427916.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu004] gi|306793921|ref|ZP_07432223.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu005] gi|306798315|ref|ZP_07436617.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu006] gi|306804191|ref|ZP_07440859.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu008] gi|306808761|ref|ZP_07445429.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu007] gi|306968593|ref|ZP_07481254.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu009] gi|307080526|ref|ZP_07489696.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu011] gi|307085126|ref|ZP_07494239.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu012] gi|61228446|sp|P0A5L6|NADE_MYCTU RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|61228447|sp|P0A5L7|NADE_MYCBO RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|31619211|emb|CAD97325.1| GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE NADE (NAD(+) SYNTHASE [GLUTAMINE-HYDROLYSING]) [Mycobacterium bovis AF2122/97] gi|41353704|emb|CAB03781.2| GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE NADE (NAD(+) SYNTHASE [GLUTAMINE-HYDROLYSING]) [Mycobacterium tuberculosis H37Rv] gi|121493968|emb|CAL72445.1| Glutamine-dependent NAD(+) synthetase nadE [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148506425|gb|ABQ74234.1| NAD(+) synthetase [Mycobacterium tuberculosis H37Ra] gi|224773927|dbj|BAH26733.1| NAD synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|289421040|gb|EFD18241.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis CPHL_A] gi|289539564|gb|EFD44142.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis K85] gi|289714134|gb|EFD78146.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis T85] gi|298495712|gb|EFI31006.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis 94_M4241A] gi|308214870|gb|EFO74269.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu001] gi|308330057|gb|EFP18908.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu003] gi|308333897|gb|EFP22748.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu004] gi|308337700|gb|EFP26551.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu005] gi|308341381|gb|EFP30232.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu006] gi|308344868|gb|EFP33719.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu007] gi|308349179|gb|EFP38030.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu008] gi|308353799|gb|EFP42650.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu009] gi|308361692|gb|EFP50543.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu011] gi|308365304|gb|EFP54155.1| glutamine-dependent NAD(+) synthetase nadE [Mycobacterium tuberculosis SUMu012] Length = 679 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 137/668 (20%), Positives = 257/668 (38%), Gaps = 114/668 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R G + L + ICED++ Sbjct: 132 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ-------------------------LSQWNYMS 258 + L + + F + + D + + ++ Sbjct: 252 EN-GALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFAL 310 Query: 259 DDSA----------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D A ++P Q+ YN V L ++ ++ KV+IG+SGG Sbjct: 311 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T + +A A+ALG + + I D Sbjct: 371 LDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGD 430 Query: 358 LVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G+ Sbjct: 431 TARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 491 STYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPELI 547 Query: 475 PH-----QTDQESLPPYPILDDIIKRIVE-----NEESFIN------------------- 505 P Q+ + + P+ + D + +++ ++ +F+ Sbjct: 548 PTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKS 607 Query: 506 NDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK- 554 Y+ +R+ V+ S++KR P G K++ A S D P +S + Sbjct: 608 ERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARI 667 Query: 555 FRDHISEE 562 + D I E Sbjct: 668 WLDQIDRE 675 >gi|240170907|ref|ZP_04749566.1| NAD synthetase [Mycobacterium kansasii ATCC 12478] Length = 680 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 140/669 (20%), Positives = 260/669 (38%), Gaps = 115/669 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + + G+ L +F EL +SGY ED++ + + + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLGLARQCHDDGVALAVFPELTLSGYSIEDILMQDALLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + + D +VVG P + + + N+ V++ G+++ V K LP Y EF+ Sbjct: 72 AVEDALLDVVAQSADLLPVLVVGAPLRYRHRIYNTAVVVHRGSVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGY----------SNDPI---------VFRDIRLGILICEDIWKNSNICKHLKK 165 E+R +G S+ P L + ICED++ Sbjct: 132 EQRQVAAGDDERGSVRICGSDVPFGPDLLFTASDLPGFVLHVEICEDMFVPVPPSAEASL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + S +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRCLLARSASSRCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHF-----------------SEQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 + L Q + F SE+ M + +++ + S Sbjct: 252 EN-GVLLAQSERFPKGERRSVADVDTELLRSERLRMGTFDDNRRHHRAAAESFRRIEFRV 310 Query: 267 IP------------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 P Q+ YN V L ++ ++ KV+IG+SGG Sbjct: 311 DPPTGDIGLRRTVERFPFVPADPRRLQQDCYEAYNIQVSGLEQRLRALHYPKVVIGVSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T ++ +A A+ALG ++ + I D Sbjct: 371 LDSTHALIVAARAMDREERPRSDILAFTLPGFATGERTKTNAVKLARALGATFEEIDIRD 430 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 S M E+ + EN+Q+ +R + L ++N ++L T + SE+ +G+ Sbjct: 431 TAALMLSEMGHPFARGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELGLGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W + G + S+L+ + EL Sbjct: 491 STYGVGDQMSHYNVNAGVPKTLIQHLIRWVITSG---EFDEHVGEVLQSVLDTEITPELV 547 Query: 475 PH------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYNDETVRY------ 517 P Q+ + + P+ + D + ++ ++ +F+ ++ E + Sbjct: 548 PSGEEEELQSSEAKVGPFALQDFSLFHVLRFGFRPSKIAFLAWHAWHDSELGTWPPGFPH 607 Query: 518 ------------------VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK 554 VE S++KR P G K++ A S D P +S + Sbjct: 608 DKRPSYSLSEIRHWLQVFVERFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSAR 667 Query: 555 -FRDHISEE 562 + D I +E Sbjct: 668 TWLDQIEQE 676 >gi|296114620|ref|ZP_06833273.1| NAD synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978976|gb|EFG85701.1| NAD synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 681 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 144/664 (21%), Positives = 240/664 (36%), Gaps = 112/664 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D N+A+ + + G+ + +F EL + GY EDL + ++ Sbjct: 14 RVAACTLPVALADPQANVARTVQQAGACDADGVAVAVFPELGLCGYAIEDLRQQDVVLER 73 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ L + T +VVG P + N +++ G ++ V K LPNY EF+E Sbjct: 74 VDAAVAELAAATAGLLPVLVVGAPLCHGGELYNCAIVIHRGRVLGVVPKSYLPNYREFYE 133 Query: 126 KRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 R F G D + LG+ ICED+W H Sbjct: 134 ARQFAPGAGVRDRHIRVGGQDAPFGTDLLFDAADVPGLTLGVEICEDMWVPQPPSTHAAL 193 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R + + +Y G+ +L +DG F Sbjct: 194 AGASVIANLSASDITVGKAQTRTLLCQAHTARCVCAYVYAAAGEGESTTDLAWDGQVSVF 253 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM-------------------------- 257 + L + F D L + M Sbjct: 254 ENGAVL-ARSARFPTGAVRAVADVDLDLLRQERMRMGTFGDNRRAAGGDGTWRRVGFVLD 312 Query: 258 --------SDDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 D A ++P Q+ + V +L+ ++ + +++IG+SGG+ Sbjct: 313 PPMRDIGLRRDIARFPFVPSDPTQLEQDCYEAFAIQVSALKQRMRTSGARRMVIGISGGL 372 Query: 304 DSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS +AV A G++ V +P T+ + +A A +ALG + I Sbjct: 373 DSTHALLVAVRAADELGLGRDVVMAYTMPGFGTTAGTRSNALALMEALGVTAAEIDIRPT 432 Query: 359 VNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 M + + EN+Q+ +R + L L+N S +++ T + SE+++G+ Sbjct: 433 ARMMLEQMGHPFAGGAAVYDVTFENVQAGLRTDFLFRLANQSGGIVIGTGDLSELALGWC 492 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD +N L KT + L W S G T VI IL+ S EL P Sbjct: 493 TYGVGDQMSHYNVNAGLPKTLIQHLIRWVMSSG---AEDARTCVILRDILDTEISPELIP 549 Query: 476 H------QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ---------------- 508 Q+ + + PY + D + I+ + +F+ Sbjct: 550 AHEGHPVQSTEARIGPYALQDFNLYYILRHGFRPSRIAFMAYHAWGDATCGAWPPGFPDD 609 Query: 509 ---EYNDETVRY-----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNKFRD 557 Y E +R VE S++KR P G K+ A S D P R Sbjct: 610 RKVAYPLEEIRRWLLVFVERFFGFSQFKRSAMPNGPKVLAGGALSPRGDWRAPSDGNARL 669 Query: 558 HISE 561 + E Sbjct: 670 WVEE 673 >gi|283768863|ref|ZP_06341774.1| NAD+ synthetase [Bulleidia extructa W1219] gi|283104649|gb|EFC06022.1| NAD+ synthetase [Bulleidia extructa W1219] Length = 642 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 131/634 (20%), Positives = 242/634 (38%), Gaps = 92/634 (14%) Query: 2 LKK--LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 +K +K+A L V+G++ N+ + +++ +++F EL ++GY DL ++ Sbjct: 1 MKNPFIKVASVSLETVLGNVMENVIQIKQSL---AETDAKIVVFPELSLTGYSLGDLFYQ 57 Query: 60 KSFIQACSSAIDTLKSDTHDGG-AGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 S +Q + + LKS + +VVG P + + N+ V + G V K LP Sbjct: 58 DSLLQEVVNGLQELKSVSRGYPHQLVVVGAPLVQKNRLYNTAVFIQNGQYRLVVPKSFLP 117 Query: 119 NYSEFHEKRTFISGY-----------------SNDPIVFRDIRLGILICEDIWKNSNICK 161 NY EF+E R F SG + + + DI++G ICED+W + Sbjct: 118 NYHEFYEGRWFDSGRWIDWDLIQIGKEEVAFGTKYLLAYEDIKIGCEICEDLWVTNRPSN 177 Query: 162 HLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 L GA + +L+AS K + R +V Q + + IY + G+ +L+F G Sbjct: 178 ALVDNGANVVVNLSASNEIIGKEEYRRNLVLQQSAVGNCAYIYASSGLGESSTDLVFSGH 237 Query: 220 SFCFDGQ----QQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEAD 275 + + + E E + SQ + + ++ + ++ E Sbjct: 238 CIIASLGHLLKESIWPTKRTILEGIVDIEQIQASRRSQNTFDNKRIYRSIPVDFKQTEQT 297 Query: 276 YNACVLSLRD-----------------------------------YVQKNNFHKVIIGLS 300 V LR+ + +IG+S Sbjct: 298 VEELVSFLRENHYEIDPLPFVPTELEERLARSHAILQIQSRGLYQRYRSTGLKTAVIGIS 357 Query: 301 GGIDSALCAAIAVDA---LGKENVQTIMLPY-KYTSPQSLEDAAACAKALGCKYDVLPIH 356 GG+DS L + + + + +P T+ + ++A A AL + +PI Sbjct: 358 GGLDSTLALLVLHETKKLYPDLRIIGVTMPSAGNTTNDTYQNALALMNALSIEIREIPIQ 417 Query: 357 DLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 +V + + EN Q+R+R +LM ++N +++ T + SE+++G+ Sbjct: 418 AMVQEHLKAIGHPDGYQGKKDTTYENAQARMRTYLLMDIANQENGLVIGTGDLSELALGW 477 Query: 416 GTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD + + KT V L S+ + S LT+V I+ S EL P Sbjct: 478 CTYNGDHMSMYGVNSSIPKTLVKYLCE---SYALESENKALTDV-LYKIVNTPISPELTP 533 Query: 476 H------QTDQESLPPYPILDDIIKRIVENE-----------ESFINNDQEYNDETVRYV 518 + Q +E++ Y + D + I+ ++ ++ +R Sbjct: 534 NKDGEIVQKTEETIGKYDLNDFFLYHIIRFGSGVKKMLVLALLAYPTQSKKEIKIALRRF 593 Query: 519 EHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYP 550 + ++KR P G K+ S D P Sbjct: 594 LTRFFSQQFKRSCLPDGPKVGTISLSPRGDWRMP 627 >gi|331697568|ref|YP_004333807.1| NAD(+) synthase [Pseudonocardia dioxanivorans CB1190] gi|326952257|gb|AEA25954.1| NAD(+) synthase (glutamine-hydrolyzing) [Pseudonocardia dioxanivorans CB1190] Length = 680 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 136/669 (20%), Positives = 246/669 (36%), Gaps = 115/669 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 L++A L V+ D A N A + G+ + LF EL +SGY ED++ + + + Sbjct: 12 LRVAACTLRTVIADPAANAASVLETARALHDDGVGMALFPELTLSGYSIEDVLLQDTLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + + D +VVG P + + + N V++ G ++ V K LP Y EF+ Sbjct: 72 AVERALADIVAGSADLLPVLVVGAPLRYRHRIHNCAVVIHRGRVLGVAPKSYLPTYREFY 131 Query: 125 EKRTFISGYS----------NDPI---------VFRDIRLGILICEDIWKNSNICKHLKK 165 E+R G + P L + ICED+W Sbjct: 132 ERRQVAPGDDIAGTLRLAGADVPFGPDLLFAAADVPGFVLHVEICEDMWVPVPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + R + S +Y G+ +L +DG + F Sbjct: 192 AGATVLANLSGSPITVGRADDRALLCRSASSRCLAAYVYAAAGEGESSTDLAWDGQTMIF 251 Query: 224 DGQQQLAFQMKHF-----------------SEQNFMTEWHYDQQLSQWNYMSDDSASTMY 266 + L + F +E+ M + +++ S Sbjct: 252 EN-GVLLAESPRFPRGPRQAVADVDLDLLRAERLRMGTFDDNRRHHAARLDSFRRIEFRL 310 Query: 267 IPL------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 P Q+ YN V L ++ KV+IG+SGG Sbjct: 311 EPPGHDIGLRREVERFPFVPADPARLEQDCYEAYNIQVSGLEQRLRAIGQPKVVIGVSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T ++ +A A+ALG ++ + I + Sbjct: 371 LDSTHALIVAARAMDREDRPRSDILAFTLPGFATGERTKNNATRLAEALGVTFETIDITE 430 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 ++ E + EN+Q+ +R + L +N ++L T + SE+++G+ Sbjct: 431 TARLMLRNLAHPFSSGEPVYDVTFENVQAGLRTDYLFRAANQRNGIVLGTGDLSELALGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL- 473 T GD +N + KT + L W S + + +L+ + EL Sbjct: 491 STYGVGDQMSHYNVNGGVPKTLIQHLIRWVVS---SKQFDDEVGAVLTDVLDTEITPELV 547 Query: 474 -----RPHQTDQESLPPYPILDDIIKRIVE----------------NEESFINNDQEYND 512 RP Q+ + ++ PY + D + ++ ++ + + + Sbjct: 548 PVDDERPVQSSEATVGPYSLQDFTLFHVLRWGMRPSKIAFLAWHAWHDVEAGDWPAGFPE 607 Query: 513 E--------TVRYVEHLLYG-----SEYKRRQAPVGTKITA---KSFGRDRLYP--ISNK 554 VR + +++KR P G K++A S D P +S + Sbjct: 608 ADRVAFAMSDVRRWLEVFAQRYFGFAQFKRSALPNGPKVSAGGSLSPRGDWRAPSDMSAR 667 Query: 555 -FRDHISEE 562 + D I E Sbjct: 668 IWLDEIRRE 676 >gi|188583705|ref|YP_001927150.1| NAD synthetase [Methylobacterium populi BJ001] gi|179347203|gb|ACB82615.1| NAD+ synthetase [Methylobacterium populi BJ001] Length = 690 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 132/663 (19%), Positives = 235/663 (35%), Gaps = 111/663 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A GD A N+A +A+ G L ++ EL +S Y EDL+ + + + A Sbjct: 24 RVAACTGRSHPGDPAANVADILGLARQAHGAGAALAVYPELCVSSYAIEDLLLQATLLDA 83 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + L +++ +VVG P + + + N V + G ++ V K LPNY EF+E Sbjct: 84 VEAGVARLVAESAGLTPLLVVGAPLRWRNRLYNCAVAIRGGRLLGVVPKSYLPNYREFYE 143 Query: 126 KRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLKK 165 KR F SG R RL I +CED+W Sbjct: 144 KRHFASGAGILGETIRLGGAEAPFGTDLIFAADDLPGFRLAIEVCEDLWVPQTPGMEAVL 203 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + + SP + R + +Y G+ +L +DG + Sbjct: 204 AGATVIANPSGSPITVGRADSRALLTRAASMRGLCAYVYAAAGTGESTTDLSWDGQTSI- 262 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD-----------------------QQLSQWNYMSDD 260 D + + + F +T D + ++ D Sbjct: 263 DEVGKRLAEGERFPAGPVVTLADIDLDLIVQERLQAGSLDDNARHHGLRPWRTVSFRLDP 322 Query: 261 S----------ASTMYIPL------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 ++P Q+ YN V L + + +IG+SGG+D Sbjct: 323 PQGDLGLERRVERFPFVPSDPASLAQDCYEAYNIQVAGLAQRLAATGTKRAVIGVSGGLD 382 Query: 305 SALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S + A ++++ LP TS ++ +A A +ALG + + I Sbjct: 383 STHALIVVAKAFDRLGLPRKDILAYTLPGFATSDETKTNAHALMRALGTTSEEIDIRPAA 442 Query: 360 NHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + M E + EN+Q+ +R + L L+N +++ T + SE+++G+ T Sbjct: 443 RQMLADMGHPFGRGEAVYDVTFENVQAGLRTDYLFRLANQHGGIVIGTGDLSELALGWST 502 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD + + KT + L W + G G ++L+ S EL P Sbjct: 503 YGVGDQMSHYGVNAGVPKTLIQHLIRWVIASG---QFGEEENRTLRAVLDTEISPELVPA 559 Query: 477 ------QTDQESLPPYPILDDIIKRIVEN-----EESFINNDQ----------------- 508 Q+ + + PY + D + + + + +F+ Sbjct: 560 AEGEGPQSTEGKIGPYALQDFSLWFTLRHGFPPSKIAFLALHAWGDAAAGDWPPDFPQAK 619 Query: 509 --EYNDETVRYV-----EHLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISNKFRDH 558 Y+ +R + S++KR P G K++A S D P R Sbjct: 620 RVAYDLPEIRRWLAVFLDRFFRFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDASARAW 679 Query: 559 ISE 561 + E Sbjct: 680 LDE 682 >gi|118580580|ref|YP_901830.1| NAD synthetase [Pelobacter propionicus DSM 2379] gi|118503290|gb|ABK99772.1| NAD+ synthetase [Pelobacter propionicus DSM 2379] Length = 689 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 136/658 (20%), Positives = 229/658 (34%), Gaps = 116/658 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D A N + +A Q + +F EL +S Y +DL +++ + Sbjct: 14 IRAAVAVPEVKVADPAHNAGQTIAMMRQAWEQSALIAIFPELGLSAYSCDDLFHQQTLLD 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+D + + D VVG P Q + N V+L G I+ V K LP Y EF+ Sbjct: 74 GSMDALDAVLKASMDIPVITVVGLPLQVHSMLFNCAVVLYRGRILGVAPKSFLPGYREFY 133 Query: 125 EKRTFISG-----YSNDPIVFRDIRLG----------------ILICEDIWKNSNICKHL 163 E R F+ D + + I G ICED+W Sbjct: 134 ELRQFVPAAYAPVEKIDLLGQQGIPFGNRLLFQVEEQPLLTFYTEICEDVWVPIPPSSFA 193 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA L +L+AS K R +V Q +Y G+ +L +DG Sbjct: 194 ALAGASVLINLSASNITVGKADYRRSLVANQSGRCLSAYLYSAAGIGESTTDLAWDGHGM 253 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQE---------- 271 F+ L + K FS ++ M D M S + ++ Sbjct: 254 IFENGACLG-ETKRFSYESQMIFADIDLDRLAQERMRQTSYGQSVLRHRDEVAGFRTVRF 312 Query: 272 --------------------------------EEADYNACVLSLRDYVQKNNFHKVIIGL 299 + Y V L + K++IG+ Sbjct: 313 SASLPRERVLPLERFYERFPFVPSDPSRRDERCKEVYEIQVQGLVKRFKATGADKMVIGV 372 Query: 300 SGGIDSALCAAIAVDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS + A+ + ++ +P TS ++LE A + +GC Y + Sbjct: 373 SGGLDSTQALLVCARAMDVMGLSRMHILAYTMPGFATSQRTLEQARELIRTVGCTYHEID 432 Query: 355 IHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I + + I EN+Q+ R + L L+N + +++ TS+ SE+ Sbjct: 433 IRPSCLQMLQDIGHPFFHGKPVYDITFENVQAGERTSHLFRLANQTGGLVVGTSDLSELG 492 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +G+ T GD ++ + KT + L W +T LGP + +LE S Sbjct: 493 LGWCTYGVGDHMAHYHVNASVPKTLIQYLIRWA---ALTHQLGPEVSTVLMDVLETEISP 549 Query: 472 ELRPH--------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYNDETVRY- 517 EL P Q ++ + PY + D + I+ + +F+ + ++ + Sbjct: 550 ELVPGKEDEDQPVQRTEDVVGPYELQDFNLYYILRLGYLPPKVAFLAWNAWHDRTRHHWP 609 Query: 518 ----------------------VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP 550 + S+YKR K+ + S D P Sbjct: 610 DIPEHKRNQYSMHDIKRWLTVFLRRFFKTSQYKRSCMANAPKVGSGGSLSPRGDWRAP 667 >gi|292490898|ref|YP_003526337.1| NAD+ synthetase [Nitrosococcus halophilus Nc4] gi|291579493|gb|ADE13950.1| NAD+ synthetase [Nitrosococcus halophilus Nc4] Length = 689 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 139/661 (21%), Positives = 234/661 (35%), Gaps = 115/661 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ A+A V D N + ++A L +F EL +S Y +DL ++ + Sbjct: 16 IRAAVAVPQLQVADPIFNAKETEALLQQAAEHKSLLSVFPELGLSAYSCDDLFQQQVLLD 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C A+ + + VVG P Q + N + G ++ + K LPNY EF+ Sbjct: 76 ECQEALGQILKRSQKLPIIGVVGLPLQVDNLLFNCAAVFHQGRLLGIVPKTYLPNYREFY 135 Query: 125 EKRTFISGY-----SNDPIVFRDIRLG----------------ILICEDIWKNSNICKHL 163 E R F S +D+ G I ICED+W + Sbjct: 136 ELRQFTPADYALRESIPLCGQKDVPFGNRLLFQVEEQPLFTFYIEICEDLWSPIPPSSYA 195 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA L +L+AS K R + + Q S +Y G+ +L +DG Sbjct: 196 ALAGATVLINLSASNITVGKDDYRRLLASSQSSRCLAAYLYTAAGSGESTTDLAWDGHGM 255 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS-------------------- 261 ++ L + + FS ++ + D Q + M +S Sbjct: 256 IYENGTCLT-ETQRFSYRSQLAMGDIDLDRLQQDRMRQNSFGQTRYRHKDLLATFRTIRF 314 Query: 262 ----------------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGL 299 Y+P + Y V L +Q KVIIG+ Sbjct: 315 SAPLPIQEQVLLKRSYERFPYVPSNPADRDQRCQEVYEIQVQGLVKRLQATGLDKVIIGI 374 Query: 300 SGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS + A+ + V +P TS Q+L+ A A+GC+ + Sbjct: 375 SGGLDSTQALIVCAHAMDVMKLPRTQVLAYTMPGFATSEQTLQQARRLMAAIGCQAHEID 434 Query: 355 IHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I + + + EN+Q+ R + L L+N A+++ TS+ SE++ Sbjct: 435 IRPSCMQMLKDLGHPYAQGKPVYDVTFENVQAGERTSHLFRLANLHGALVVGTSDLSELA 494 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +G+ T GD ++ + KT + + W + + LG I I E S Sbjct: 495 LGWCTYGVGDHMAHYHVNASVPKTLIQYIVGWVSKN---QQLGIEASRILEEIRETEISP 551 Query: 472 ELR-------PHQTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYND------- 512 EL P Q +E + PY + D + + + +F+ ++ Sbjct: 552 ELIPHENNEQPAQRSEEVIGPYQLQDFHLYYTLRFGYTPAKIAFLAWSAWHDRTGGTWPD 611 Query: 513 ------------ETVRY----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISN 553 E R+ +E S++KR P G K+ A S D P + Sbjct: 612 IPKAQHNQYELTEIKRWLGVFLERFFKFSQFKRSCLPNGPKVGSGGALSPRGDYRAPSDS 671 Query: 554 K 554 + Sbjct: 672 E 672 >gi|167969761|ref|ZP_02552038.1| NAD synthetase [Mycobacterium tuberculosis H37Ra] Length = 679 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 136/668 (20%), Positives = 257/668 (38%), Gaps = 114/668 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R G + L + ICED++ Sbjct: 132 ERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ-------------------------LSQWNYMS 258 + L + + F + + D + + ++ Sbjct: 252 EN-GALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFAL 310 Query: 259 DDSA----------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D A ++P Q+ YN V L ++ ++ KV+IG+SGG Sbjct: 311 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T + +A A+ALG + + I D Sbjct: 371 LDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGD 430 Query: 358 LVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G+ Sbjct: 431 TARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + + W S G G + S+L+ + EL Sbjct: 491 STYGVGDQMSHYNVNAGVPKTLIQHMIRWVISAG---EFGEKVGEVLQSVLDTEITPELI 547 Query: 475 PH-----QTDQESLPPYPILDDIIKRIVE-----NEESFIN------------------- 505 P Q+ + + P+ + D + +++ ++ +F+ Sbjct: 548 PTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKS 607 Query: 506 NDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK- 554 Y+ +R+ V+ S++KR P G K++ A S D P +S + Sbjct: 608 ERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARI 667 Query: 555 FRDHISEE 562 + D I E Sbjct: 668 WLDQIDRE 675 >gi|320527433|ref|ZP_08028614.1| NAD+ synthetase [Solobacterium moorei F0204] gi|320132146|gb|EFW24695.1| NAD+ synthetase [Solobacterium moorei F0204] Length = 653 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 123/658 (18%), Positives = 231/658 (35%), Gaps = 103/658 (15%) Query: 1 MLKKL-KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFK 59 M ++ K+ V ++ N A+ + E G +++ EL ++GY DL + Sbjct: 1 MKNRMIKVGTVVPRMKVANVIYNTAQIIQTMNENADAG--FLVYPELCLTGYTCGDLFGQ 58 Query: 60 KSFIQACSSAIDTLKSDTHDG-GAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLP 118 + + A + + + ++ G +VVG P + + + N V + G I+AV KINLP Sbjct: 59 FTLLDAVEEGLFKIANASNKLEGLTVVVGAPLRFENHLYNCAVYISEGMIVAVVPKINLP 118 Query: 119 NYSEFHEKRTFISG-----------YSNDPI--------VFRDIRLGILICEDIWKNSNI 159 YSEF+E R F SG P +G+ ICED+W Sbjct: 119 TYSEFYESRWFTSGKNIVSQTIQLGDEFIPFGRNILACDSRSGAIVGLDICEDLWVPDKP 178 Query: 160 CKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFD 217 H GA + +L+AS K R +V Q + + +YV+ + +L+F Sbjct: 179 STHACLAGANIIANLSASDEMIGKQDYRRTMVLQQSASCYCAYLYVSSATDESSTDLVFS 238 Query: 218 GASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDD----------------- 260 G S + L + + + + + Sbjct: 239 GHSMIACNGRLLTNSIFPEDTKVETVVIDLESIEKNRRHQTTFDLEENHDDYVYVDVSIK 298 Query: 261 -----------------------SASTMYIPLQE------EEADYNACVLSLRDYVQKNN 291 ++P+ + L V+ Sbjct: 299 PISNQDEITVDELVDALRKEGYVVNRNPFVPVDDEERGRRCMKILEIQANGLATRVRSTG 358 Query: 292 FHKVIIGLSGGIDSALCAAIAVDAL---GKENVQTIMLPYKY-TSPQSLEDAAACAKALG 347 ++IG+SGG+DS L + A ++ LP T+ + +A +AL Sbjct: 359 IKNLVIGISGGLDSTLALLVCHQARKLVPDIHIIGYTLPSHGNTTSYTYNNALDLMRALD 418 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQ-EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTS 406 + + I + V + + EN Q+R+R ILM ++N + +++ T Sbjct: 419 VEMHEVAIEEGVQAHLKQIGHPGSYQGDGDTTYENAQARMRTYILMDVANMANGLVVGTG 478 Query: 407 NKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILE 466 + SE+++G+ T GD + + KT V + ++ L EV+ I Sbjct: 479 DLSELALGWCTYNGDHMSMYAVNASVPKTLVQYICR---TYAYICNQEDLKEVLLK-ICN 534 Query: 467 KSPSAELRP-------HQTDQESLPPYPILDDIIKRIVENEES-----------FINNDQ 508 S EL P Q ++ + Y + D + ++ S + ++ Sbjct: 535 TPISPELTPHDENGKIAQRTEDKIGKYDLNDFFLYYVLRYGYSPEKIMVLALTAYPELEK 594 Query: 509 EYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNK---FRDHISE 561 E E + + ++KR P G K+ + + D P + + + + Sbjct: 595 EKVREAMLRFFKRFFNQQFKRSCLPDGPKVGSVTLSPRGDWRMPSDASAELWLEQVKK 652 >gi|296448109|ref|ZP_06890010.1| NAD+ synthetase [Methylosinus trichosporium OB3b] gi|296254374|gb|EFH01500.1| NAD+ synthetase [Methylosinus trichosporium OB3b] Length = 676 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 140/654 (21%), Positives = 249/654 (38%), Gaps = 109/654 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+ V D A N+A+ EA+ +G ++LF EL IS Y +DL+ + + + Sbjct: 14 VRVAVGGPRTRVADPAFNVARTIEMAREADARGASIVLFPELGISSYAIDDLLHQDALLA 73 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A +A+ L + + VG P + + + N V+ G I+AV K+ LPNY EF+ Sbjct: 74 AVEAALGELLEASRALHPILAVGAPLRWRSRLYNCAVLARRGEILAVTPKVYLPNYREFY 133 Query: 125 EKRTFISG----------------YSNDPI----VFRDIRLGILICEDIWKNSNICKHLK 164 EKR F SG + +D + F + + ICED+W Sbjct: 134 EKRHFASGASIAGEEIDIAGRLAPFGSDVLLEARDFAGLVIHAEICEDVWVPIPPSTRAA 193 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K R + G + +Y G+ +L +DG + Sbjct: 194 LAGATVLLNLSASDAIVGKSDYRASLCAGHSARCLSAYLYSAAGQGESTTDLSWDGEAMI 253 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------ 258 ++ +L + F+E + D + M Sbjct: 254 YENGARL-ASAERFAETPQLIFADLDIGRLEAERMRQGSFGDCADVEAATRFRRVLFDLE 312 Query: 259 ----------DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + A ++P E +N LR +Q +++IG+SGG Sbjct: 313 APRDKNLGLLREVARFPFVPDDEARLAELCFEAFNIQSHGLRQRLQAAKIDRIVIGVSGG 372 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +AV A + N+ LP T+ ++ +A +ALG + + + Sbjct: 373 LDSTHALLVAVAAFDALGLPRTNILAYTLPAFATTDRTKANAWRLMRALGVSAEEIDVGP 432 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + E + EN+Q+ R ++L L+N A++L T + SEI++G+ Sbjct: 433 ACRQMLDDIGHPAARGEALYDVTYENVQAGARTSLLFRLANRHDAIVLGTGDLSEIALGW 492 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W + G T + IL+ S EL Sbjct: 493 CTYGVGDQMSHYNVNASVPKTLIQHLIRWCAR---DAHFGAATAPVLRDILDTEISPELV 549 Query: 475 PH---QTDQESLPPYPILDDII-----KRIVENEESFI-------------------NND 507 P Q ++ + PY + D + ++ +F+ + Sbjct: 550 PGETTQRTEDVVGPYALQDFNLFYTTRYGFTPSKTAFLAFHAWSDAAAGHWPSDIPQDKR 609 Query: 508 QEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISN 553 + Y+ + +++ S++KR P G K++ + S D P Sbjct: 610 RAYDLDAIKHWLGVFARRFFATSQFKRSALPNGPKVSSGGSLSPRGDWRAPSDA 663 >gi|218754169|ref|ZP_03532965.1| NAD synthetase [Mycobacterium tuberculosis GM 1503] gi|297635046|ref|ZP_06952826.1| NAD synthetase [Mycobacterium tuberculosis KZN 4207] gi|297732037|ref|ZP_06961155.1| NAD synthetase [Mycobacterium tuberculosis KZN R506] gi|313659373|ref|ZP_07816253.1| NAD synthetase [Mycobacterium tuberculosis KZN V2475] Length = 679 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 137/668 (20%), Positives = 256/668 (38%), Gaps = 114/668 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R G + L + ICED++ Sbjct: 132 ELRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ-------------------------LSQWNYMS 258 + L + + F + + D + + ++ Sbjct: 252 EN-GALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFAL 310 Query: 259 DDSA----------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D A ++P Q+ YN V L ++ ++ KV+IG+SGG Sbjct: 311 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T + +A A+ALG + + I D Sbjct: 371 LDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGD 430 Query: 358 LVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G+ Sbjct: 431 TARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 491 STYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPELI 547 Query: 475 PH-----QTDQESLPPYPILDDIIKRIVE-----NEESFIN------------------- 505 P Q+ + + P+ + D + +++ ++ +F+ Sbjct: 548 PTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKS 607 Query: 506 NDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK- 554 Y+ +R+ V+ S++KR P G K++ A S D P +S + Sbjct: 608 ERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARI 667 Query: 555 FRDHISEE 562 + D I E Sbjct: 668 WLDQIDRE 675 >gi|323358755|ref|YP_004225151.1| NAD synthase [Microbacterium testaceum StLB037] gi|323275126|dbj|BAJ75271.1| NAD synthase [Microbacterium testaceum StLB037] Length = 685 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 130/665 (19%), Positives = 250/665 (37%), Gaps = 116/665 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + + D A N + + +G+ + +F EL ++GY +DLV + + A Sbjct: 17 RVAACTIPVAIADPATNADAVLESARACDAEGVAVAVFPELCLTGYAIDDLVMQDPLLDA 76 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A++ + S + D ++VG P + + N V++ G ++ V K LP Y EF+E Sbjct: 77 VETALERVVSASVDLLPMLLVGAPLRHGNRLFNCAVVIHRGRVLGVAPKAYLPTYREFYE 136 Query: 126 KRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 R + G D + + + +CED+W Sbjct: 137 SRWYARGDDQAGQHIRVAGETVPFGPDLLFDAVDVPGLTVHAEVCEDVWVPIPPSSGAAL 196 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + R+ + Q +Y G+ ++ +DG + + Sbjct: 197 AGATVLANLSGSPITIGRADDRNLLSQSQSMRCLAAYVYAAAGQGESTNDVSWDGQTMIY 256 Query: 224 DGQQQLA-----------------------------------------FQMKHFSEQNFM 242 +G Q L F+ F Sbjct: 257 EGGQLLDTTERFPDGPRRSVADIDLDRLRQERIRQGTFDDNRRTTAPAFRTVSFELAPPA 316 Query: 243 TEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + + L ++ ++ DD A Q+ +N V L +Q K ++G+SGG Sbjct: 317 ADIGLRRALDRFPFVPDDPARLA----QDCYEAFNIQVSGLVQRLQAIGNPKPVLGVSGG 372 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS + A+ + ++ T LP TS ++ +A A A+A+G + + I Sbjct: 373 LDSTHALLVIARAMDRMGRPRSDILTYTLPGFATSEKTKRNAIALAEAVGASIEEIDIRP 432 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + S M E + EN+Q+ +R + L L+N + +++ T + SEI++G+ Sbjct: 433 AASEMLSRMGHPFASGEPVHDVTFENVQAGLRTDYLFRLANQNNGIVVGTGDLSEIALGW 492 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD ++ + KT + + W S G L T + ++L+ S EL Sbjct: 493 STYGVGDQMSHYSVNPGVPKTLIQHVIRWVISSG---ELSAETVGVLQAVLDTEISPELV 549 Query: 475 PH------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ--------------- 508 P Q+ ++ + PY + D + ++ ++ +F+ Sbjct: 550 PAGQDGRMQSTEDRIGPYNLHDFTLYHVLRFGFRPSKIAFLAAHAWSDPDAGTWPPGYPE 609 Query: 509 ----EYNDETVRYVE-----HLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISNKFR 556 Y+ TV +++KR P G K++ + S D P R Sbjct: 610 GERPSYDLVTVARWLEVFLQRFFGFAQFKRTAIPNGPKVSPAGSLSPRGDWRAPSDGNAR 669 Query: 557 DHISE 561 +++ Sbjct: 670 AWLAD 674 >gi|225181299|ref|ZP_03734744.1| NAD+ synthetase [Dethiobacter alkaliphilus AHT 1] gi|225168079|gb|EEG76885.1| NAD+ synthetase [Dethiobacter alkaliphilus AHT 1] Length = 682 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 146/670 (21%), Positives = 248/670 (37%), Gaps = 117/670 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A+A V D A N + EEA Q L LF EL IS Y EDL +++ ++ Sbjct: 13 IRVAVAVPEVRVADPAFNATHTIQLAEEAAAQRAVLTLFPELGISAYTNEDLFHQQALLE 72 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + I L +T + +VVG P + N ++L G I+ + K LPNY EF+ Sbjct: 73 STEREIKRLLRETSFLDSILVVGAPVLVDSSLYNCGLVLHRGQILGIVPKTYLPNYREFY 132 Query: 125 EKRTFIS------------GYSNDPI---------VFRDIRLGILICEDIWKNSNICKHL 163 E R F S G P + + +CED+W + Sbjct: 133 EGRHFRSPDTTTRNTIEYCGQEEIPFGTDLLFNVRNIPNFIFALELCEDLWVPAPPSSFA 192 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L A+ K R+ +V+ Q + +Y G+ +L +DG + Sbjct: 193 ALAGATVIANLTATNLTIGKADYRNALVSNQSARCLCGYMYSAAGPGESTTDLAWDGQAL 252 Query: 222 CFDGQQQLAFQMKHFSEQNFMT--EWHYDQQLSQWNYM---------------------- 257 ++ + L+ + F ++ +T E D+ + + Sbjct: 253 IYEAGECLS-KSSRFDLESRLTYSEIDLDKLVMERTRQNSFTENARVLSDYQRFRTVHCD 311 Query: 258 ----------SDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + ++P E YN V L +Q +IIG+SG Sbjct: 312 IQLTDGELLLTRQYPRFPFVPSGEKDRDRNCYDAYNIQVHGLVKRLQYTKSETIIIGISG 371 Query: 302 GIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A +E ++ +P TS ++ E+A KALG + L I Sbjct: 372 GLDSTQSLLVAAKAADMLGWPRERIRAYTMPGFATSSRTKENAWRLIKALGVYGEELDIR 431 Query: 357 DLVNHFFSLMSQFLQEE--PSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 N S + + ENIQ+ R + L L+N K ++L T + SE+++G Sbjct: 432 PACNLMLSDIGHPASGGTGDYDVTYENIQAGQRTSTLFRLANMHKGIVLGTGDLSELALG 491 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD +N + KT + L W + + T + IL S EL Sbjct: 492 WTTYGVGDHMSHYNVNGSVPKTLIQYLLRW---QTVPGRVDEDTRNVLLDILSTEISPEL 548 Query: 474 RPH--------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYNDETVRY--- 517 P Q ++ + PY + D I ++ +F+ + +N E + Sbjct: 549 VPGKSDADQPSQRTEDFIGPYELQDFHIYYTTRYGFRPSKVAFLAYNAWHNKEQGSWPDI 608 Query: 518 --------------------VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 V S++KR P G K+ + S D P ++ Sbjct: 609 PEEKRNQYTIGEIKHWLEIFVRRFFARSQFKRSVMPDGPKVGSGGSLSPRGDWRAPSDSE 668 Query: 555 ---FRDHISE 561 + + +S Sbjct: 669 ATPWLEDLSR 678 >gi|108800509|ref|YP_640706.1| NAD synthetase [Mycobacterium sp. MCS] gi|119869648|ref|YP_939600.1| NAD synthetase [Mycobacterium sp. KMS] gi|126436125|ref|YP_001071816.1| NAD synthetase [Mycobacterium sp. JLS] gi|108770928|gb|ABG09650.1| NAD+ synthetase [Mycobacterium sp. MCS] gi|119695737|gb|ABL92810.1| NAD+ synthetase [Mycobacterium sp. KMS] gi|126235925|gb|ABN99325.1| NAD+ synthetase [Mycobacterium sp. JLS] Length = 680 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 129/653 (19%), Positives = 244/653 (37%), Gaps = 112/653 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 +IA + + D GN R + + L +F EL ++GY ED+V + ++A Sbjct: 13 RIAACTHHTSIADPKGNAESVLRMARDCHDDNAALAVFPELTLTGYSIEDIVMQDGLLEA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ + + + + +VVG P + + V N+ V++ G ++ V K +PNY EF+E Sbjct: 73 VEAALLQVVTASAELLPVLVVGAPLRYRHRVYNTAVVIHRGQVLGVVPKSYIPNYREFYE 132 Query: 126 KRTFISGYS-------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQ 166 R +G + L + ICED+W Sbjct: 133 NRQIAAGDEERGEIRVGGQEVPFGPDLLFEATDVPGFVLHVEICEDMWVPVPPSAEAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +L+ SP + + R + S +Y G+ +L +DG + ++ Sbjct: 193 GATVLANLSGSPITIGRSEDRCLLARSASSRCLAAYVYAAAGEGESTTDLAWDGQTMIWE 252 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYD--------------QQLSQWNYMSDDSASTMYIP-- 268 L Q + F + + D + + + +DS + Sbjct: 253 NGSCL-AQSERFPKGERRSIADVDLQLLRNERLRMGTFDDNRRHHLIDEDSFRRIEFTLD 311 Query: 269 -------------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 Q+ YN V L ++ ++ K+++GLSGG+ Sbjct: 312 PPTGDIGLYREVERFPFVPADPARLEQDCYEAYNIQVAGLEQRLRALHYPKIVLGLSGGL 371 Query: 304 DSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS +A A+ +E ++ LP T + +A A+ALG ++ + I Sbjct: 372 DSTHALIVAARAMDREERPRSDILAFTLPGFATGEHTRNNATRLAEALGVTFETIDITST 431 Query: 359 VNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + M E+ + EN+Q+ +R + L L+N ++L T + SE+++G+ Sbjct: 432 AKLMLTEMDHPFSRGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELALGWS 491 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD +N + KT + L W ++ + S+L+ + EL P Sbjct: 492 TYGVGDQMSHYNVNGGVPKTLIQHLIRWV---ILSKQFDDTVNEVLQSVLDTEITPELVP 548 Query: 476 H------QTDQESLPPYPILDDIIKRIVE-----NEESFIN------------------- 505 Q+ + + PY + D + +++ ++ +F+ Sbjct: 549 SGEDEEIQSSEAKVGPYVLQDFSLFQVLRYGFRPSKVAFLAWHAWRDADSGNWPTGFPDS 608 Query: 506 NDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKITA---KSFGRDRLYP 550 Y + +R+ S++KR P G K++A S D P Sbjct: 609 KRPSYTLDEIRHWLQVFAQRFYSFSQFKRSALPNGPKVSAGGSLSPRGDWRAP 661 >gi|315605989|ref|ZP_07881020.1| NAD synthetase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312271|gb|EFU60357.1| NAD synthetase [Actinomyces sp. oral taxon 180 str. F0310] Length = 702 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 138/675 (20%), Positives = 250/675 (37%), Gaps = 123/675 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L A N + A + + +G+ + +F EL +SGY +DL+ + + Sbjct: 13 RVAAVTLPVHPARPADNAREIIDAARQLDARGVAVAVFPELCVSGYSIDDLLLQDVLLDN 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ ++ + D +VVG P + + N V + G ++A+ K +LPNY EF+E Sbjct: 73 VEKALASIVEASTDLLPLLVVGAPLRKDNALYNCAVAIHRGRVLAIIPKSHLPNYREFYE 132 Query: 126 KRTFISG-----------------YSNDPIV------------FRDIRLGILICEDIWKN 156 KR F++ +S P+ + +GI ICED+W Sbjct: 133 KRYFVTAPARTRERIEVPWGGIEEFSGTPVWVPFGQVLLSAADVPGLSVGIEICEDMWVP 192 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--EL 214 L GA L +L+ASP + R +V + +Y G+ +L Sbjct: 193 VTPATELALAGATVLANLSASPITVGRGADRELMVRSVSARCSAAYVYTAAGMGESSTDL 252 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS------------- 261 +DG + ++ +LA + F E MT D + + +S Sbjct: 253 AWDGETMIYEAGDRLAI-GERFQEGAHMTITDVDLERLRTERKRQNSFTDNAQRYFAGDE 311 Query: 262 ------------------------ASTMYIPL------QEEEADYNACVLSLRDYVQKNN 291 ++P Q+ YN V L ++ Sbjct: 312 RMAPQEVEFTLNPPRTDLGLIRPVNRFPFVPNDPTRLEQDCYEAYNIQVAGLVQRLRAIG 371 Query: 292 FHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 K++IG+SGG+DS +A A+ + ++ LP TS ++ +A + L Sbjct: 372 NPKIVIGVSGGLDSTHALVVASRAMDLLGRPRTDILCYTLPGFATSERTKRNATLLCRYL 431 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLT 404 G + + I + + E + + EN+Q+ +R + L L+NH +++ Sbjct: 432 GTSFQEIDIRPAATQMLADIGHPYGEGEATYDVTFENVQAGLRTDYLFRLANHLGGIVVG 491 Query: 405 TSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T + SE+++G+ T GD + + KT + L W + + EV+ S Sbjct: 492 TGDLSELALGWCTYGVGDQMSHYAVNTGVPKTLMQHLIRWVVASKQFDDH--VGEVLL-S 548 Query: 464 ILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EE 501 IL S EL P Q+ Q+ + PY + D + ++ + Sbjct: 549 ILNTEISPELVPAKPGEKMQSTQDKIGPYNLQDFTLYHVLRRGARPSKIAFLAEKAWSDA 608 Query: 502 SFINNDQEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRD 546 S + + +E R + ++KR P G K+ + S D Sbjct: 609 SVGDWPVGFPEEDKVAYSLEEIVKWERLFLWRFFSQQFKRSALPNGPKVMAGGSLSPRGD 668 Query: 547 RLYPISNKFRDHISE 561 P D ++E Sbjct: 669 WRMPSDVSGADWVAE 683 >gi|189218737|ref|YP_001939378.1| NAD synthetase [Methylacidiphilum infernorum V4] gi|189185595|gb|ACD82780.1| NAD synthetase and glutamine amidotransferase [Methylacidiphilum infernorum V4] Length = 670 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 136/665 (20%), Positives = 235/665 (35%), Gaps = 121/665 (18%) Query: 15 VVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLK 74 V D N + +A + L++F EL +S Y EDL + + ++ A++ L Sbjct: 3 KVADPFYNATQIAELCRQAADKKATLVVFPELCLSAYSCEDLFHQSALLEVSLRALEYLL 62 Query: 75 SDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFIS--- 131 +T +VG P + + + N + G I+ V K LPNY EF+E R F Sbjct: 63 EETAPLSLLTLVGLPLRVNQLLYNCGCLFSRGKILGVIPKSYLPNYREFYESRQFSQAAL 122 Query: 132 ---------GYSNDPI----VFRD-----IRLGILICEDIWKNSNICKHLKKQGAEFLFS 173 G P +F +L I ICED+W GA L + Sbjct: 123 ATEEYVDLLGQKAIPFGTNLIFEWEQQPLFKLAIEICEDLWVPLPPSSFAALAGATVLVN 182 Query: 174 LNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAF 231 L+AS K R +V Q IY G+ +L +DG ++ +L Sbjct: 183 LSASNITIGKSDYRKLLVASQSGRCISAYIYSAAGFGESTTDLAWDGEGLIYENGTKL-A 241 Query: 232 QMKHFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPL---------------------- 269 + + F+ + + D Q + M +S + Sbjct: 242 ETRRFAYDSQLVFADVDLDRLQADRMRQNSFGQTKVHFKKEISSFKTLTFSLDVNKESIL 301 Query: 270 --------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCA 309 Q + Y L ++ + K +IG+SGG+DSA Sbjct: 302 LLERVLERFPYVPSDPLTRDQRCQEVYAIQTQGLIQRLKATSIRKTVIGISGGLDSAHAL 361 Query: 310 AIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFS 364 + A+ ++N+ +P T+ ++LE A +A GC+ + I F Sbjct: 362 IVCAKAMDILGFPRQNILACTMPGFATTKKTLEQARRLIEATGCREYFIDIRPSCMQLFK 421 Query: 365 LMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGD 421 + E+ + EN+Q+ R N L L+N A+++ TS+ SE+++G+ T GD Sbjct: 422 DIGHPFARGEKLYDVTFENVQAGERTNHLFRLANFENALVVGTSDLSELALGWSTYGVGD 481 Query: 422 MSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH----- 476 ++ + KT + L W + T LG + IL+ S EL P Sbjct: 482 HMAHYHVNASVPKTLIKFLIRWVSK---TQELGEKVSEVLDEILDTVISPELIPGENAQE 538 Query: 477 --QTDQESLPPYPILDDIIKRIVE----------------------NEESFINNDQEYND 512 Q+ +E + PY + D + + + Y+ Sbjct: 539 PLQSSEEQIGPYNLQDFNLYYTLRYGYLPTKTAFLCWSAWHDKNRGQWPEMEKKREAYSI 598 Query: 513 ETVRYV-----EHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK-------FRD 557 + ++Y + S++KR K+ + S D P + + + Sbjct: 599 DQIKYWLRVFLDRFFRTSQFKRSCIANAPKVGSGGSLSPRGDYRAPSDSSSAPWLKIWEE 658 Query: 558 HISEE 562 S E Sbjct: 659 IPSSE 663 >gi|307726056|ref|YP_003909269.1| NAD+ synthetase [Burkholderia sp. CCGE1003] gi|307586581|gb|ADN59978.1| NAD+ synthetase [Burkholderia sp. CCGE1003] Length = 682 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 138/659 (20%), Positives = 247/659 (37%), Gaps = 114/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A V D N + R +EA +QG L++F EL IS Y +DL +++ + A Sbjct: 15 RVAVAVPVCRVADPQFNAQETLRLAQEAAQQGAALVVFPELGISAYSCDDLFHQRALLDA 74 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 C +AI + + + + A +V+G P + + N +++ G + V K LPNY EF+E Sbjct: 75 CKAAIADIVAASTNIPAILVIGAPLAVEHKLFNCALVISNGKLCGVVPKSYLPNYGEFYE 134 Query: 126 KRTFISGY--SNDPIVFRD------------------IRLGILICEDIWKNSNICKHLKK 165 R F + S I R + ICED+W Sbjct: 135 ARQFSAAENASTSEITLCGQQVPFSASLLFEVPQAPLFRFHVEICEDVWVPVPPSSFAAL 194 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K RH++V Q + +Y + G+ +L +DG + + Sbjct: 195 AGATVLVNLSASNIVIGKSGYRHQLVGQQSARCLSAYLYSSAGRGESTTDLAWDGQALIY 254 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + + L + + F + + + D + M + Sbjct: 255 ENGEML-AESERFLDTSHIIYGDVDLERLSRERMRQTTFGQSTRRHAQEVARFQVISVPV 313 Query: 262 --------------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 Y+P YN V L + KV+IG+SG Sbjct: 314 SLPAAQHLPLMRAINRFPYVPSNPATRDERCAEVYNIQVQGLLQRLGAAKISKVVIGVSG 373 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS + A+ + N+ +P TS ++L+ A +A+GC + + I Sbjct: 374 GLDSTQALLVCAKAMDRLKLPRSNILGYTMPGFATSSRTLQQAKDLMQAVGCSMEEIDIR 433 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + E+ + EN+Q+ R + L L+N +A+++ T + SE+++G Sbjct: 434 PSCMQMLKDLHHPFAEGEKQYDVTFENVQAGERTSHLFRLANFHQAIVIGTGDLSELALG 493 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD ++ + KT + L W G G + IL S EL Sbjct: 494 WCTYGVGDHMSHYSVNASVPKTLITHLVRWVAESGQV---GDAGSRVLEQILATEISPEL 550 Query: 474 RPH-------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ------------- 508 P Q + + PY + D + ++ ++ +F+ + Sbjct: 551 VPGKEEKVIDQKTESIIGPYELQDFNLYYLLRFGFTPSKVAFLAHSAWADRERGVWPAGR 610 Query: 509 -----EYNDETVRY-----VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 EY ++ E + S++KR P K+ + S D P ++ Sbjct: 611 HVTRNEYTLADIKRNLAIFAERFFHTSQFKRSCIPNAPKVGSGGSLSPRGDWRAPSDSE 669 >gi|254551488|ref|ZP_05141935.1| NAD synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 679 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 137/668 (20%), Positives = 256/668 (38%), Gaps = 114/668 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD A N A + G L +F EL +SGY ED++ + S + Sbjct: 12 VRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ L +++ D +VVG P + + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E R G + L + ICED++ Sbjct: 132 ELRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQ-------------------------LSQWNYMS 258 + L + + F + + D + + ++ Sbjct: 252 EN-GALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFAL 310 Query: 259 DDSA----------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D A ++P Q+ YN V L ++ ++ KV+IG+SGG Sbjct: 311 DPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T + +A A+ALG + + I D Sbjct: 371 LDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGD 430 Query: 358 LVNHFFSLMSQF--LQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E+ + EN+Q+ +R + L ++N ++L T + SE+++G+ Sbjct: 431 TARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S G G + S+L+ + EL Sbjct: 491 STYGVGDQMSHYNVDAGVPKTLIQHLIRWVISAG---EFGEKVGEVLQSVLDTEITPELI 547 Query: 475 PH-----QTDQESLPPYPILDDIIKRIVE-----NEESFIN------------------- 505 P Q+ + + P+ + D + +++ ++ +F+ Sbjct: 548 PTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKS 607 Query: 506 NDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK- 554 Y+ +R+ V+ S++KR P G K++ A S D P +S + Sbjct: 608 ERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARI 667 Query: 555 FRDHISEE 562 + D I E Sbjct: 668 WLDQIDRE 675 >gi|189485551|ref|YP_001956492.1| NAD+ synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287510|dbj|BAG14031.1| NAD+ synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 630 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 133/632 (21%), Positives = 254/632 (40%), Gaps = 88/632 (13%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +K A A + V + + N+A+ + E+AN G++L++F EL ++GY +L + Sbjct: 6 IKTAAATPHISVANPSVNVAEIIKLIEQANACGVELLVFPELCVTGYTCGELFLSDVLMH 65 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + S A++ + T A + VG P ++ + + V G ++ V K LP+YSEF+ Sbjct: 66 SVSDALNMVCKTTVGEKALVFVGSPIWNEGKLYSCAVAFQNGKVLGVVPKTALPSYSEFY 125 Query: 125 EKRTFISGYS--------------NDPIVF-----RDIRLGILICEDIWKNSNICKHLKK 165 E R F+SG I+F +++ ICED++ S + Sbjct: 126 ELRHFVSGRDISGSIKLCRQTAPFGTDIIFAAKNNDTVKIAAEICEDMFIISPPSNRHVQ 185 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K+ R ++ Q + +Y + G+ ++IF G Sbjct: 186 AGASVIVNLSASNELIGKVDYRKTLIKSQSGRLSAGYVYASAGSGESVSDIIFSGVRIIA 245 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM-------------------------S 258 + ++ + F + E + + + Sbjct: 246 E-SGEILAEGGLFESGLTLCEIDTQRLAYERRRLNVFESYNSSGYRTVEFNFDETGTELM 304 Query: 259 DDSASTMYIPLQEEEADYNA-CVL-----SLRDYVQKNNFHKVIIGLSGGIDSALCAAIA 312 + ++P + A +L +L + ++ ++G+SGG+DS L Sbjct: 305 RHISQLPFVPEDLKSVSSRAELILQMQSRALAERLKFTG-SNAVLGISGGLDSCLALLAV 363 Query: 313 VDALG-----KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMS 367 V + K+++ + +P TS +++E + A+ALG + +PI D+V + + Sbjct: 364 VRSYEILGRSKKDIIAVTMPGPGTSLKTVESVSELAEALGIQIRKIPITDIVRKHLTDIK 423 Query: 368 QFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFN 427 +E V EN Q+R R ILM ++N + +++ T + SE ++G+ T GD + Sbjct: 424 HSGKE---DTVYENAQARERTQILMDIANAEEGLVIGTGDLSENALGWCTYNGDHMSMYA 480 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP------HQTDQE 481 + KT V L S+ + + L SIL S EL P Q ++ Sbjct: 481 VNSSVPKTLVKHLVSYESERVVKYKKALL------SILNTEISPELLPSDNGKISQKTED 534 Query: 482 SLPPYPILDDIIKRIVENEE--------SFINNDQEYNDETVRYVEH----LLYGSEYKR 529 + PY + D + V + + +Y+ E ++ + S++KR Sbjct: 535 IIGPYELHDFFLYYTVRFGQKPDKTLMLALKAFKGKYDIEEIKKYLRVFIERFFASQFKR 594 Query: 530 RQAPVGTKITAKSFGR--DRLYPISNKFRDHI 559 P G KI S D + ++ + Sbjct: 595 NCVPDGIKIGTISLSPRGDWRMATESSAKEWL 626 >gi|187735126|ref|YP_001877238.1| NAD+ synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187425178|gb|ACD04457.1| NAD+ synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 644 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 126/634 (19%), Positives = 227/634 (35%), Gaps = 93/634 (14%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A A V ++ N+ + +A Q ++F EL I+GY DL F+ + +A Sbjct: 6 RLASAVPQLRVAEVDYNVDQLTEGFRKAAEQQAAAVVFPELCITGYSCGDLFFQPNLRKA 65 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + T G VVG P ++ + N+ ++ +G I+A+ K LPNY EF+E Sbjct: 66 ALNGLLRFTEATEGSGTIAVVGLPFLHEDALYNTAAVVQSGRILALVPKTVLPNYREFYE 125 Query: 126 KRTFISGYSNDP----IVFRDIRL-----------------GILICEDIWKNSNICKHLK 164 KR F SG + + + G+ ICED+W L Sbjct: 126 KRQFTSGRELGTGVKEVTVNGVHIPFGTEIVFHEESSPFSFGVEICEDLWSVIPPSSKLA 185 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + + +A K R E+V Q + + + + +F G S Sbjct: 186 LLGARAILNPSAGTELTGKAAYRRELVRQQSGRCLCAYVLSSAGVHESTTDTVFGGHSLI 245 Query: 223 FDGQQQLAFQMKHFSEQNFM-TEWHYDQQLSQWNYMSDDSASTMYIP------------- 268 D + A + E + + +++ + S + S P Sbjct: 246 ADNGRPAAEGERFCRESTLIFADVDFERLEAARLSESSFNDSKSLFPAGNALHLALPEQV 305 Query: 269 -----------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDS 305 + E + L ++ +++IG+SGG+DS Sbjct: 306 PGAPGLEYAFNPALPFLPSPSRRRERCEEIISIQTAGLAKRMEHTRAQRLVIGISGGLDS 365 Query: 306 ALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVN 360 L I A ++ + +P T+ ++ ++A + LG + +PI + Sbjct: 366 TLALLICSRACRALKRPASDILAVTMPGFGTTDRTHDNAVTMCRLLGVELREIPISECCL 425 Query: 361 HFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 F+ + E + EN+Q+R R ILM L+N + +++ T + SEI++G+ T G Sbjct: 426 RHFADIGHDPAERTT--TYENVQARERTQILMDLANKTGGLVVGTGDLSEIALGWSTYNG 483 Query: 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH---- 476 D + + KT + L P I S EL P Sbjct: 484 DHMSMYAVNCSIPKTLIRCLIEHIAEESS-----PELAATLADINNTPVSPELLPPSDDG 538 Query: 477 ---QTDQESLPPYPILDDIIKRIVEN--------EESFINNDQEYNDETVRY----VEHL 521 Q ++ L PY + D + ++ + E+ + +R Sbjct: 539 TIEQKTEDVLGPYDLHDFFLFHFIKYGAEPDKILHLAEHAFRGEFQPDFIRRCLGIFIRR 598 Query: 522 LYGSEYKRRQAPVGTKITAKSFGR--DRLYPISN 553 + ++KR P G K+ S D P Sbjct: 599 FFRQQFKRSCMPDGPKVGTISLSPRGDWRMPSDA 632 >gi|85859763|ref|YP_461965.1| NAD synthetase [Syntrophus aciditrophicus SB] gi|85722854|gb|ABC77797.1| glutamine-dependent NAD(+) synthetase [Syntrophus aciditrophicus SB] Length = 691 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 133/660 (20%), Positives = 225/660 (34%), Gaps = 114/660 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ AI + V D N K +EA LF EL +S Y EDL + + + Sbjct: 20 IRTAICIPDVRVADTEFNAEKTISMAKEAAAGKAVFALFPELNLSAYSNEDLFHQDALQE 79 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A+ + +T ++VG P + + N VIL G I+ + K LPNY EF+ Sbjct: 80 NVYDALFKVARETASLNLILIVGAPIRVDCRLYNCGVILYQGRILGIAVKSYLPNYREFY 139 Query: 125 EKRTFISGYS---------------------NDPIVFRDIRLGILICEDIWKNSNICKHL 163 E R F + ++ + I ICED+W Sbjct: 140 EARQFSPADQAIATSIDLGTQNDIPFGANLIFEVKNIKNFKFFIEICEDVWVPIPPSSFA 199 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS K + RH + Q + +Y G+ +L +DG + Sbjct: 200 AMAGATVIANLSASNITVGKSEYRHSLTANQSARCVSAYLYAAAGPGESTTDLAWDGHAM 259 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS----------------------- 258 ++ L + + FS + D + M Sbjct: 260 IYEN-GNLLSESQRFSRVPQIIFADVDLDRLAQDRMRLTTFGLNARTHKDILCRFRRIAF 318 Query: 259 ------------DDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLS 300 YIP YN V L ++ V+IG+S Sbjct: 319 DIAPVSGKIFLIRQYPRFPYIPADPSKRDQRCYESYNIQVQGLSKRLESTGIKNVVIGIS 378 Query: 301 GGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPI 355 GG+DS +A + + ++ +P T+ ++ ++ KAL + + + I Sbjct: 379 GGLDSTHALIVAAKTMDLLGYPRSCIKAYTMPGFATTDKTYTNSLRLMKALEVEANEIDI 438 Query: 356 HDLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413 + E + I ENIQ+ R + L ++N A++L T + SE+++ Sbjct: 439 RPSCIQMLKDIGHPFAEGKKLYDITFENIQAGERTSHLFRIANMRNALVLGTGDLSELAL 498 Query: 414 GYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAE 472 G+ T GD ++ + KT + L W ++ P T ILE S E Sbjct: 499 GWCTYGVGDHMSHYSVNASVPKTLIQHLIRWVAQ---SNQFSPETSETLIDILETEISPE 555 Query: 473 LRPH-------QTDQESLPPYPILD-----------------DIIKRIVENEESFI---- 504 L P Q + + PY + D I N++ I Sbjct: 556 LVPGEENQQPAQKTELIIGPYELQDFNNFYTTRFGYLPTKIAFIAYCTWRNKKEGIWPDL 615 Query: 505 --NNDQEYNDETVRYV-----EHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNK 554 EY +++ S++KR P K+ + S D P ++ Sbjct: 616 PEEKKHEYTIGEIKHWLQIYLLRFFKLSQFKRSCIPNSPKVGSGGSLSPRGDYRAPSDSE 675 >gi|320094460|ref|ZP_08026239.1| NAD synthetase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978634|gb|EFW10198.1| NAD synthetase [Actinomyces sp. oral taxon 178 str. F0338] Length = 694 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 139/675 (20%), Positives = 250/675 (37%), Gaps = 123/675 (18%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L A N + A + + +G+ L +F EL +SGY +DL+ + + + Sbjct: 13 RVAAVTLPVHPARPADNAREIIDAARQLSERGVALAVFPELCVSGYALDDLLLQDTLLDN 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ ++ + +VVG P + + N + + G ++A+ K +LPNY EF+E Sbjct: 73 VEKALASIVGASAGLLPLLVVGAPLRKDNALYNCAIAIHRGRVLAIIPKSHLPNYREFYE 132 Query: 126 KRTFIS-----------------GYSNDPIV------------FRDIRLGILICEDIWKN 156 KR F++ +S P+ + +GI ICED+W Sbjct: 133 KRYFVTMPPRACERIEAPWGGIEEFSGAPVWVPFGQVLLSAADVPGLTIGIEICEDMWVP 192 Query: 157 SNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--EL 214 L GA L +L+ASP + R +V + +Y G+ +L Sbjct: 193 VTPATELALAGATVLANLSASPITVGRGADRELMVRSVSARCSAAYVYTAAGMGESSTDL 252 Query: 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS------------- 261 +DG + ++ +LA + F E MT D + + +S Sbjct: 253 AWDGETMVYEAGDRLAI-GERFQEGAHMTIADVDLERLRTERKRQNSFTDNAQRYFAGDE 311 Query: 262 ------------------------ASTMYIPL------QEEEADYNACVLSLRDYVQKNN 291 ++P Q+ YN V L ++ Sbjct: 312 RMTPQEVEFTLNPPRTDLGLQRPVDRFPFVPDDPSRLEQDCYEAYNIQVAGLVQRLRAIG 371 Query: 292 FHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKAL 346 KV+IG+SGG+DS +A A+ + ++ LP TS ++ ++A + L Sbjct: 372 DPKVVIGVSGGLDSTHALVVASRAMDLLGRPRTDILCYTLPGFATSERTKKNATLLCRYL 431 Query: 347 GCKYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLT 404 G + + I + + E + EN+Q+ +R + L L+NH ++L Sbjct: 432 GTSFQEIDIRPAATQMLADIGHPYGEGEAAYDVTFENVQAGLRTDYLFRLANHLGGIVLG 491 Query: 405 TSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T + SE+++G+ T GD + + KT + L W + + EV+ S Sbjct: 492 TGDLSELALGWCTYGVGDQMSHYAVNTGVPKTLMQHLIRWVVASKQFDDH--VGEVLL-S 548 Query: 464 ILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVEN----------------EE 501 IL S EL P Q+ Q+ + PY + D + ++ + Sbjct: 549 ILNTEISPELVPAKPGEKMQSTQDKIGPYNLQDFTLYHVLRRGARPSKIAFLAEKAWSDA 608 Query: 502 SFINNDQEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTKI---TAKSFGRD 546 S + + +E R + ++KR P G K+ + S D Sbjct: 609 SVGDWPAGFPEEDKAAYSLAEIVKWERLFLQRFFSQQFKRSALPNGPKVMAGGSLSPRGD 668 Query: 547 RLYPISNKFRDHISE 561 P D ++E Sbjct: 669 WRMPADVSGADWVAE 683 >gi|326384196|ref|ZP_08205878.1| NAD synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326197061|gb|EGD54253.1| NAD synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 673 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 135/655 (20%), Positives = 235/655 (35%), Gaps = 110/655 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A A + D N ++ A+R+ + ++ F EL + GY +DLV + + + Sbjct: 10 RLAAAVPQVALADPRQNASRTIELIRRAHRESVAVVAFPELGLCGYSVDDLVQQDALLDE 69 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ + + T D + VG P + + + N V++ G I+ V K LPNY EF+E Sbjct: 70 VDAALAAVVAATVDLMPVVAVGAPLRVDDALYNCAVLIHGGRILGVTPKSYLPNYREFYE 129 Query: 126 KRTFIS-----------GYSNDPI---------VFRDIRLGILICEDIWKNSNICKHLKK 165 +R F + G P +R+ +CED W Sbjct: 130 QRFFAAARDAVRDTVVVGGQRVPFGTDLIFEADDVPGLRVHAEVCEDGWVAIPPSTWASL 189 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP K R +VTG + +YV+ G+ +L +DG + Sbjct: 190 AGATVLLNLSGSPVTVGKQAYRRSLVTGHSARCIAAQLYVSAGFGESTTDLAWDGDALIA 249 Query: 224 DGQQQLAFQMKHFSEQNFMT-EWHYDQQLSQWNYM------------------------- 257 + LA E + + D+ + M Sbjct: 250 ENGTLLARSAGFSMEPQLIVGDVDLDRLRQERARMISLRDQVGDFADRARSFRRVSFTVG 309 Query: 258 --------SDDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 ++P + + V L ++ K++IG+SGG+ Sbjct: 310 IPETTDGLRRAVPRFPFVPTGAADRDERCREVLDIQVQGLVARLRSTGIDKIVIGVSGGL 369 Query: 304 DSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS L +AV A + N+ +P T +L + +LG + L I Sbjct: 370 DSTLALLVAVQAFDAMGLPRTNIHAYTMPGFATGGATLARSHVLMDSLGVTGNELDIRPS 429 Query: 359 VNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + + E + EN+Q+ R + L L+NH ++L T + SE+++G+ Sbjct: 430 CMQMLADLKHPFADGEPVYDVTFENVQAGERTSHLFRLANHLGGIVLGTGDLSELALGWC 489 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD +N + KT + L W+ + GP T IL+ S EL P Sbjct: 490 TYGVGDQMSHYNVNGSVPKTLIQHLIRWKITTAR---YGPDTIATLQEILDDVISPELVP 546 Query: 476 H------QTDQESLPPYPILDDIIKRIVE------------------------NEESFIN 505 Q+ ++ + PY + D + + +E + Sbjct: 547 ADADGNIQSTEDHVGPYELHDFFLYHLTRFGYRPSKIAYLAQQAWSDRDHGAWSEMMTDD 606 Query: 506 NDQEYNDETVRYV----EHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISN 553 EY+ T+ +++KR P G KI + S D P Sbjct: 607 ERNEYDAATIDKWLTVFLKRFMSNQFKRTAMPNGPKIGSGGSLSPRGDWRSPSDA 661 >gi|319779599|ref|YP_004130512.1| NAD synthetase [Taylorella equigenitalis MCE9] gi|317109623|gb|ADU92369.1| NAD synthetase [Taylorella equigenitalis MCE9] Length = 545 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 176/564 (31%), Positives = 289/564 (51%), Gaps = 34/564 (6%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ +AQLNP+ GD GN A +D++++ + SGY + L+ ++ ++ Sbjct: 3 IRFGLAQLNPITGDFDGNEKLMTDYLTIAKENNIDVLVYPKFSFSGYGSDGLMLREDYLN 62 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGF-PRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEF 123 +D D +G + D V +S+ ++++ I V + L Sbjct: 63 KEFQTVDHFGRVVADSFSGSIFTTSFDNDNNSVYSSLKLVESRPQIPVTHDMGL------ 116 Query: 124 HEKRTFISGYSNDPIVFRDIRLGILICE-DIWKNSNICKHLKKQGAEFLFSLNASPYYHN 182 + F++ ND R+G I D W + + ++F L+A PY+ Sbjct: 117 -DSELFVTTTENDK------RVGYAIFSGDSWMKPELVDKALSKVSQFAIVLDAKPYHTE 169 Query: 183 KLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMKHFSEQNFM 242 + E++ I L ++Y N +GG DE +FDG SF ++ F + + Sbjct: 170 SFNETVELLKEHICSKGLKVVYCNLLGGHDECVFDGTSFVMGEDGEVRALGTRFKQGLNV 229 Query: 243 TEWH-YDQQLSQWNYMSDDSASTMYIPLQEEEA----DYNACVLSLRDYVQKNNFHKVII 297 E +D +++ ++ S S L E + ++A L+ +Y++KNNF ++++ Sbjct: 230 FEISIFDDEVTHHEFIEYSSNSLNSETLYELDCLEAEIWSALCLATNNYIRKNNFSQIVL 289 Query: 298 GLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 GLSGGIDSAL AIA DA+G +N + +P ++T+ S +DA L KYD++PI Sbjct: 290 GLSGGIDSALVLAIASDAIGAQNCHALSMPSEFTAQMSNDDAKTMCSTLKVKYDIVPIRP 349 Query: 358 LVNHFFSLMSQFLQE---EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + + L++ + + EN+Q+R+RG ILMAL+N A++L+T NKSE + G Sbjct: 350 MYQVIHDSLKPLLEQIETQSKDVTLENLQARVRGVILMALANKKNALVLSTGNKSESATG 409 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGDM G F+ + D+ KT V++LA WRNS T IP I+E++PSAEL Sbjct: 410 YCTLYGDMVGAFSVISDVPKTLVYRLAMWRNSQSST---------IPQRIIERAPSAELA 460 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEE--SFINNDQEYNDETVRYVEHLLYGSEYKRRQA 532 P Q DQ+SLPPY +LD II +V N++ S + + E + LL SE+KRRQA Sbjct: 461 PGQVDQDSLPPYDVLDQIIDGLVLNDKSSSELKITTSLSPEEIDKTSKLLKISEFKRRQA 520 Query: 533 PVGTKITAKSFGRDRLYPISNKFR 556 +G KI+ +SF P+++K++ Sbjct: 521 ALGPKISKRSFFSGWNVPVTHKYK 544 >gi|319441771|ref|ZP_07990927.1| NAD synthetase [Corynebacterium variabile DSM 44702] Length = 688 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 130/653 (19%), Positives = 234/653 (35%), Gaps = 112/653 (17%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDT 77 D A N A E + + + +F EL ++GY +DLV + + A + A++TL + + Sbjct: 31 DPATNAQSILDAARELHDDHVGVAVFPELSLTGYAIDDLVLQDVLLDAVTDAVETLVAAS 90 Query: 78 HDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS--- 134 D +VVG P + N V++ G I+ V K NLP Y EF+E+R + G Sbjct: 91 IDLMPVLVVGAPLAHGNRLYNCAVVIHRGEILGVVPKSNLPTYREFYERRWYAPGDDIQD 150 Query: 135 -----------------NDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 + + + ICED+W GA L +L+ S Sbjct: 151 ATIRIGDNRALFGTDLLFEAADVKGLTFHAEICEDMWVPVPPSARAALNGATVLLNLSGS 210 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKH 235 P + RH + + +Y G+ ++ +DG + + + L + + Sbjct: 211 PITQRRADDRHLLASSASLRCQAAYVYAAAGHGESTNDVAWDGLTMVHE-RGVLLRETER 269 Query: 236 FSEQNFMTEWHYDQQLSQWNY------------------------------------MSD 259 F + + D + + Sbjct: 270 FPDGTRYSVVDVDLDSIRQARLHQGTFDDNRRTLDDLGEREYRTVDFTLDPPRGEIGLRR 329 Query: 260 DSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV 313 D A ++P Q+ +N V L + K +IG+SGG+DS + Sbjct: 330 DLARFPFVPGDPARLAQDCYEAFNIQVAGLAQRLSAIGNPKPVIGVSGGLDSTHALLVIA 389 Query: 314 DAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQ 368 A+ + ++ +P TS + +A A+A+G + + I M Sbjct: 390 RAMDRAGRPRSDILAYTMPGFATSEHTKSNAVKLAEAIGASIETIDIVPAATELLKKMHH 449 Query: 369 FL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGG 425 E + EN+Q+ +R + L L+NH +++ T + SEI++G+ T GD Sbjct: 450 PFGDGEPVYDVTFENVQAGLRTDYLFRLANHHGGIVVGTGDLSEIALGWCTYGVGDQMSH 509 Query: 426 FNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH------QTD 479 + + KT + L W + G+ T + S+L+ S EL P Q+ Sbjct: 510 YGVNCGVPKTLMQHLIRWVIAE--REGVDAATVEVLQSVLDTEISPELVPPGADGKVQST 567 Query: 480 QESLPPYPILDDIIKRIVE---------------NEESFINNDQEYND------------ 512 + ++ PY + D + I+ + + D Sbjct: 568 ESTIGPYALHDFTLWHILAGLRPSKIAFLAWHAWKDAEVGEWPAGFPDEDRYTYDLATIV 627 Query: 513 ETVRYVEHLLYG-SEYKRRQAPVGTKIT---AKSFGRDRLYPISNKFRDHISE 561 E R +G +++KR P G K++ + S D P R ++E Sbjct: 628 EWERSFLQRFFGFAQFKRTAIPNGPKVSPAGSLSPRGDWRAPSDGNARAWLAE 680 >gi|269958040|ref|YP_003327829.1| NAD(+) synthase (glutamine-hydrolyzing) [Xylanimonas cellulosilytica DSM 15894] gi|269306721|gb|ACZ32271.1| NAD(+) synthase (glutamine-hydrolyzing) [Xylanimonas cellulosilytica DSM 15894] Length = 682 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 134/656 (20%), Positives = 247/656 (37%), Gaps = 112/656 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V D A N A + +G+ + +F EL ++GY +DL + ++A Sbjct: 16 RVAAVTVPVRVADPAANAAVVVEQARACHGEGVAVAVFPELCLTGYAIDDLFLQDPLLEA 75 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + A+ + + D +VVG P + VLN ++ G I+ V K LP Y EF+E Sbjct: 76 AADALAVVVDASADLMTVLVVGLPLEAGGRVLNCAAVVHRGRILGVAPKSYLPTYREFYE 135 Query: 126 KRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLKK 165 +R F G R +R+ + +CED+W Sbjct: 136 RRWFAPGDDRRGATIRVLGEDVPFGPDLIFEASDVAGLRVHVEVCEDMWVPVPPSAEAAL 195 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ASP + + R +V + +Y G+ +L +DG + + Sbjct: 196 AGATVLANLSASPITVARAEDRRLMVRSASARCSAAYVYAAAAQGESSTDLSWDGQTMVY 255 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS---------------------- 261 + L + + F + T D + + + Sbjct: 256 EC-GDLLGESERFPDGPRRTVVDVDLDRLRQERLRQGTFDDNRRTLAARTGSFRTVGFEL 314 Query: 262 -------------ASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 ++P + YN V +L + K++IG+SGG Sbjct: 315 APPSSDLGLRRKVDRFPFVPDDAERLALDCYEAYNIQVTALEQRLTSIGRPKIVIGVSGG 374 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E++ LP T ++ + A ++LG ++ + I Sbjct: 375 LDSTHALIVAAKAMDRLGRPREDILAYTLPGFATGTETKDRAWRLGRSLGVSFEEIDIRP 434 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E + EN+Q+ +R + L L+NH+ ++L T + SE+++G+ Sbjct: 435 AATQLLTDLGHPFGRGEPVYDVTFENVQAGLRTDYLFRLANHNGGIVLGTGDLSELALGW 494 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD + + KT + L W S TS G T+ + IL++ S EL Sbjct: 495 ATYGVGDQMSHYVINSGVPKTLIQHLIRWVIS---TSQFGAETDTVLAEILDQEISPELV 551 Query: 475 PH------QTDQESLPPYPILDDIIKRIVE-----NEESFI------------------- 504 P Q+ + + PYP+ D + + ++ +F+ Sbjct: 552 PAGADGALQSTEAKIGPYPLQDFTLYWTLRYGLRPSKIAFLQWHAWHDAAAGEWPPGFPH 611 Query: 505 NNDQEYNDETVRYVE----HLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISN 553 + Y+ T+R + +++KR P G K++A S D P Sbjct: 612 DERSAYDLATIRRWMSLFFRRFFANQFKRSAIPNGPKVSAGGTLSPRGDWRMPSDA 667 >gi|162146741|ref|YP_001601200.1| NAD synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161785316|emb|CAP54862.1| putative glutamine-dependent NAD(+) synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 742 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 143/669 (21%), Positives = 241/669 (36%), Gaps = 117/669 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D A N+A+ + G+ L +F EL +SGY EDL + + Sbjct: 72 RVAGCTLPVALADPATNVARMADMVRACHADGVALAVFPELGVSGYTIEDLRQQDVLLDG 131 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ L + T D +V G P + + + N VIL G ++ V K LPNY EF+E Sbjct: 132 VGAALAALAAATADLVPVVVAGAPLRHGDALYNCAVILHRGTVLGVVPKSYLPNYREFYE 191 Query: 126 KRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 R F G + + + I ICED+W + Sbjct: 192 ARQFAPGAGLRGQTIHVAGQTAPFGTDLLFEAEDVPGLVIAIEICEDLWVPAPPSTDAAL 251 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R + Q + +Y G+ +L +DG + Sbjct: 252 AGATVIANPSASDITVGKADTRDLLCRSQSARALCAYVYAAAGEGESTTDLAWDGQVSVY 311 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD-----QQLSQWNYMSDDSA---------------- 262 + L + F + D Q+ ++ +D+ A Sbjct: 312 EN-GALLAETVRFPQGPNRATADIDLDLLRQERARMGSFADNRAARGLHATGGDTGWRRV 370 Query: 263 ------------------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 ++P Q+ + V +L+ +Q +++IG Sbjct: 371 GFALAPPPGDLGLMRRIERFPFVPADPARLEQDCYEAWTIQVSALKQRLQATGTRRMVIG 430 Query: 299 LSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS +AV A G++ V +P TS + +A A +ALG L Sbjct: 431 VSGGLDSTQALLVAVRAADELGLGRDAVLAYTMPGFGTSAGTQSNAMALMQALGVTAAEL 490 Query: 354 PIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I M + EN+Q+ +R + L L+N +++ T + SE+ Sbjct: 491 DIRPTARMMLEQMGHPFASGVPQYDVTFENVQAGLRTDFLFRLANQHGGIVIGTGDLSEL 550 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++G+ T GD +N L KT + L W S + SIL+ S Sbjct: 551 ALGWCTYGVGDQMSHYNVNAGLPKTLIQHLIRWVISARRVDDDAAG---VLASILDTEIS 607 Query: 471 AELRPH------QTDQESLPPYPILDDIIKRIVEN-----EESF---------------- 503 EL P Q+ +E + PY + D + ++ + +F Sbjct: 608 PELVPAGEDQALQSTEERIGPYALQDFTLFYVLRHGFRPSRIAFMAEIAWKDAGIGAWPP 667 Query: 504 ---INNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPIS 552 + EY+ T+R+ S++KR P G K+ A S D P Sbjct: 668 GFPADRRVEYDLPTIRHWLSVFLTRFFGFSQFKRSAMPNGPKVVAGGALSPRGDWRAPSD 727 Query: 553 NKFRDHISE 561 R + E Sbjct: 728 GNARLWLEE 736 >gi|120404894|ref|YP_954723.1| NAD synthetase [Mycobacterium vanbaalenii PYR-1] gi|119957712|gb|ABM14717.1| NAD+ synthetase [Mycobacterium vanbaalenii PYR-1] Length = 680 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 129/665 (19%), Positives = 239/665 (35%), Gaps = 112/665 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + + D A N E + + L +F EL +SGY ED++ + + + Sbjct: 12 VRVAACTQHVAIADPAANAKSVLEVARECDADSVALAVFPELTLSGYSIEDILLQDALLD 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + + +VVG P + + N+ V++ G ++ V K LP Y EF+ Sbjct: 72 AVHEAVLEVAAGSAGMMTVLVVGAPLRFGHRIYNTAVVIHRGRVLGVVPKSYLPTYREFY 131 Query: 125 EKRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKK 165 E+R +G V L + ICED++ Sbjct: 132 ERRQLAAGDDVCGTVRIGDVDAPFGPDLLFTATDVPGFVLHVEICEDMFVPIPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + R + S +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRADDRKLLARSASSRCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD-------------------------QQLSQWNYMS 258 + L + + F E + D + + Sbjct: 252 ENGVCL-AESERFPEGVRRSVADVDLELLRAERLRMGTFDDNRVHHGITADGYRRVEFRL 310 Query: 259 DDSA----------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 D ++P Q+ YN V L ++ KV+IG+SGG Sbjct: 311 DPPPGDIGLRREVERFPFVPSDPSRLQQDCYEAYNIQVSGLEQRLRAIGSPKVVIGVSGG 370 Query: 303 IDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ + ++ LP T ++ +A + LG + + I Sbjct: 371 LDSTHALIVAARAMDRLGRPRSDILAFTLPGFATGDRTKGNAVRLGETLGVTFSEIDIRK 430 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E+ + EN+Q+ +R + L L+N ++L T + SE+++G+ Sbjct: 431 TAELMLTEIEHPFARGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELALGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT + L W S + + S+L+ S EL Sbjct: 491 STYGVGDQMSHYNVNSGVPKTLIQHLIRWVIS---SDQFDKAVNEVLQSVLDTEISPELV 547 Query: 475 PH------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ--------------- 508 P Q+ Q+ + PY + D + +++ ++ +F+ Sbjct: 548 PAGEDEEIQSTQDKIGPYVLQDFSLFQVLRYGFRPSKVAFLAFHAWSDASHGDWPPGFPE 607 Query: 509 ----EYNDETVRYVE-----HLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISNKFR 556 Y + +R+ S++KR P G K++A S D P R Sbjct: 608 GKRPAYPLKEIRHWLQVFAQRFYSFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDMSAR 667 Query: 557 DHISE 561 + E Sbjct: 668 TWLDE 672 >gi|111222668|ref|YP_713462.1| NAD synthetase [Frankia alni ACN14a] gi|111150200|emb|CAJ61895.1| NAD(+) synthase (glutamine-hydrolyzing) [Frankia alni ACN14a] Length = 713 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 136/657 (20%), Positives = 240/657 (36%), Gaps = 113/657 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A A V + A N A+ G+D++++ EL +S Y +DL + + + A Sbjct: 45 RVAAATPLVVTAEPARNAEATVALARRADADGVDVVVYPELGLSSYALDDLHLQDALLDA 104 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+DT+ + + G ++VG P + + + N+ + + G I+ V K LPNY E++E Sbjct: 105 VEQAVDTVCRASAELGPLLLVGAPLRHRGRLYNTALAISRGRILGVVPKTFLPNYREYYE 164 Query: 126 KRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 KR F SG + D+ +GI ICED W + Sbjct: 165 KRWFASGAGVTGEEITVAGRTVPFGTDLIFEATDLADLVVGIEICEDYWAPIPPSSYAAM 224 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K R + Q + +Y G+ +L +DG Sbjct: 225 AGATLLANLSASNIVVGKAADRAHLSAAQSARALAAYVYSAAGTGESTTDLAWDGQGTIH 284 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS----DDSASTMYIPLQ--------- 270 + L + + F++ + D + M DSA+ P Q Sbjct: 285 EL-GDLLAESERFADTPQLLVADVDLARVRQERMRTGTFHDSAAVAGRPEQRFRTVRFDH 343 Query: 271 ----------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + +N V L + +++IG+SGG Sbjct: 344 RPHRRDVGLRRHQRRFPFVPDTAERLDLDCYEAFNIQVHGLARRYRATGGGRMVIGVSGG 403 Query: 303 IDSALCAAIAVDALGKENV-----QTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A + V LP TS ++ +A A +ALG + + I Sbjct: 404 LDSTHALIVAAKACDRLGVPRTTILGYTLPGFATSAETKANAWALMRALGVEAAEIDIRP 463 Query: 358 LVNHFFSLMSQFLQEEPSG--IVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + + E + + EN+Q+ +R + L L+NH ++ T + SE+++G+ Sbjct: 464 AARQLLADLGHPAAEGAADYDVTYENVQAGLRTDYLFRLANHHGGFVVGTGDLSELALGW 523 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD + + KT + L W SH T + ++L+ S EL Sbjct: 524 CTYGVGDQMSHYAVNAGVPKTLIQYLIRWAVSH---DQFDADTGKLLTAVLDTEISPELV 580 Query: 475 PH-------QTDQESLPPYPILDDIIKRIVENEESFINND----------------QEYN 511 P Q+ Q+ + PY + D + ++ + + + Sbjct: 581 PADAETGAMQSTQDRIGPYELHDFFLYHLLRHGLAPSKIAFLAWHAWRDALTDGWPAGFP 640 Query: 512 DE------------TVRYVEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYPISN 553 D+ +R S++KR P G K++ S D P Sbjct: 641 DDERHAYELPTIVRWLREFLGRFMASQFKRSALPNGPKVSYGGTLSPRGDWRAPSDA 697 >gi|227494858|ref|ZP_03925174.1| NAD(+) synthase (glutamine-hydrolyzing) [Actinomyces coleocanis DSM 15436] gi|226831310|gb|EEH63693.1| NAD(+) synthase (glutamine-hydrolyzing) [Actinomyces coleocanis DSM 15436] Length = 683 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 135/660 (20%), Positives = 257/660 (38%), Gaps = 109/660 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D A N + A EA+ QG L++F EL ++GY EDL Sbjct: 13 RVAAVTLPVALADPATNARRIIEAATEAHNQGCSLVVFPELSLTGYTAEDLFLSDVMYDE 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ +K + + I+VG P + + N+ + + G+ +AV+ K+++PNY EF+E Sbjct: 73 VIKALQEIKEASKELTPLILVGSPLRHAANLYNTAIAIHKGHFLAVKPKLHIPNYGEFYE 132 Query: 126 KRTFI------------------SGYSNDPIVFRDIR---LGILICEDIWKNSNICKHLK 164 R F G++ + D+ + ICE++W S + Sbjct: 133 VRWFAQISAWQVPAEFKIGKDVVPGFACPALQATDLPAFVVAPEICEELWVTSPVSADAS 192 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA + +L++SP + + R + IY + G+ +L +DG + Sbjct: 193 ACGATIIANLSSSPVTVGRARDRRLMCQSASHRGACAYIYTSSGEGESTNDLAWDGQALI 252 Query: 223 FDGQQQLAFQMKHFSE-QNFMTEWHYDQQLSQWNYMSDDS-------------------- 261 ++ + + Q + + D+ Q M+ + Sbjct: 253 YEAGDLVKENQRFHRGLQLTIADIDLDRLRHQQQRMNTFTHVSAEDTQVIEFELNPPHTD 312 Query: 262 -------------ASTMYIPLQEEEADYNACVLSLRDYVQKNNFH-KVIIGLSGGIDSAL 307 S ++ YN V SL ++ + K ++G+SGG+DS Sbjct: 313 LGLQRQIQRFPYVPSDPATMDEDCFEAYNIQVSSLMRRLESIGPNVKPVLGVSGGLDSTQ 372 Query: 308 CAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHF 362 + V+A+ +E + T +P T+ + +A A ++ALG ++ L I Sbjct: 373 ALLVCVEAMDRLGRPREYILTFTMPGFATTEHTRSNAQALSEALGTTFETLDIRPAATQM 432 Query: 363 FSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-Y 419 M EE + EN+Q+ +R + L ++N +++ T + SE+++G+ T Sbjct: 433 LKEMGHPFGRGEEVYDVTFENVQAGLRTDFLFRIANARGGIVIGTGDLSELALGWCTYGV 492 Query: 420 GDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP---- 475 GD ++ + KT + L W S G + P+ + I SIL+ + EL P Sbjct: 493 GDHMSHYSVNPGVPKTLMQHLVRWVVSSGKFNE--PVND-ILNSILDTEITPELIPLKAG 549 Query: 476 --HQTDQESLPPYPILDDIIKRIVE----------------NEESFINNDQEYND----- 512 Q+ Q S+ PY + D + ++ + + Y + Sbjct: 550 EEPQSTQSSIGPYSLHDFTLYYTLKYGYRVEKIAFRAWHAWRDAAAGEWPLGYPEGDRVQ 609 Query: 513 ---ETVRYVEHL----LYGSEYKRRQAPVGTKI---TAKSFGRDRLYP---ISNKFRDHI 559 E + + L + +++KR P G K+ + S D P +++ + I Sbjct: 610 YGLEDILMWQRLFFRRFFQNQFKRTAVPNGVKVLPAGSLSPRGDWRMPSDALADAWLRRI 669 >gi|254417841|ref|ZP_05031565.1| NAD synthase family [Brevundimonas sp. BAL3] gi|196184018|gb|EDX78994.1| NAD synthase family [Brevundimonas sp. BAL3] Length = 657 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 132/628 (21%), Positives = 225/628 (35%), Gaps = 114/628 (18%) Query: 42 LFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVV 101 +F EL +SGY +DL+ +++ + + L +++ D ++VG P + + + N V Sbjct: 2 VFPELGLSGYSIDDLLLQRALLDEVERQLVNLVAESRDLHPVVLVGAPLRREGRLYNCAV 61 Query: 102 ILDAGNIIAVRDKINLPNYSEFHEKRTFISGY----------SNDPI---------VFRD 142 + G ++ V K +LPNY EF+EKR F SG P Sbjct: 62 AIHRGRVLGVVPKGHLPNYREFYEKRWFASGRDVEGEITIGGETAPFGMDLLFQADDVDG 121 Query: 143 IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPI 202 + + ICED+W + GA L +L+AS K R + Q Sbjct: 122 LIFHVEICEDVWAPAPPSDFAALAGALILTNLSASNIVVGKADTRRRLCELQSGRCWAAY 181 Query: 203 IYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS-- 258 IY G+ +L +DG + ++ QL + + FS + M D + Q M Sbjct: 182 IYSAAGYGESTTDLAWDGQACIYELGAQL-AETERFSLGSQMAVADIDVERLQLERMRTG 240 Query: 259 ------------------------------------DDSASTMYIPLQEEEADYNA---C 279 D P + ++ Y A Sbjct: 241 TFNEAAIANGMPDRRFRRVTFHLDPPVRNLGLQRRIDRFPFVPNDPSRLDQDCYEAFNIQ 300 Query: 280 VLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVD-----ALGKENVQTIMLPYKYTSPQ 334 V L ++ K+ IG+SGG+DSA +A + ++ +P TS + Sbjct: 301 VSGLAKRLEATGTAKICIGVSGGLDSAHALIVAAKVFDLLGRPRTDILGFTMPGFGTSAR 360 Query: 335 SLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILM 392 + +A A LG + + I L + E EN+Q+ +R ++L Sbjct: 361 TKSNAYALMNGLGVTVEEIDIKPLAQQMLQDLRHPFARGEPVYDTTFENVQAGLRTDLLF 420 Query: 393 ALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITS 451 +N M+L T N SE+++G+ T GD +N L KT + L W ++ + Sbjct: 421 RAANQRNGMVLGTGNMSELALGWCTYGVGDQMSHYNVNGSLPKTLIQHLVRWTAANRL-- 478 Query: 452 GLGPLTEVIPPSILEKSPSAELRPH------QTDQESLPPYPILDDIIKRIVE------- 498 P + IL + S EL P Q+ + + PY + D I + Sbjct: 479 -FDPAVSDVLLDILATTISPELIPQTAEGESQSTEGKIGPYELHDFWIYYLTRFGLRPSK 537 Query: 499 ---------NEESFINNDQEYNDE------------TVRYVEHLLYGSEYKRRQAPVGTK 537 + + N + DE + + +++KR P G K Sbjct: 538 IAFLALHAWQDAAAGNWPPGFPDEQKRAYPIGSIRSWLEVFLQRFFANQFKRSALPNGPK 597 Query: 538 IT---AKSFGRDRLYPISNK---FRDHI 559 +T + S D P + D + Sbjct: 598 VTTGGSLSPRGDWRMPSDAHGQVWIDEL 625 >gi|90417816|ref|ZP_01225728.1| glutamine-dependent NAD(+) synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90337488|gb|EAS51139.1| glutamine-dependent NAD(+) synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 691 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 137/655 (20%), Positives = 237/655 (36%), Gaps = 113/655 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ +A + D A N A RA E+A+++G+DL++F EL +S Y +DL + + + Sbjct: 20 VRVGVATPGVFIADPARNAAATIRAAEDADKEGVDLLVFPELGLSAYAIDDLHLQDALLD 79 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + SA+ T+ + D + ++VG P + + N V + G I+ V K+ LPNY E++ Sbjct: 80 SVESALATVCERSRDLRSVLLVGAPLRRNGRLYNCAVAIARGRILGVVPKLFLPNYREYY 139 Query: 125 EKRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNICKHLK 164 EKR F SG + ICED W + Sbjct: 140 EKRWFASGAGMTGRDITVAGQEAPFGIDLLFEASDLPGFVFHTEICEDYWAPTPPSTDGA 199 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K RH + Q +Y G+ +L +DG Sbjct: 200 MAGARILCNLSASNIVVGKSADRHLLSASQSMRCIAAYVYSAAGRGESTTDLAWDGQGSI 259 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS----DDSASTMYIP---------- 268 ++ L + K F++ + D + +D+A+ P Sbjct: 260 YEL-GDLLAESKRFADAGQLIVADVDVGRIGQERLRTPTFNDAAALRGHPETAFRTVRFA 318 Query: 269 ---------------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 Q+ +N V LR + ++IG+SG Sbjct: 319 HEPAFEDLGLRRPVRRFPYVPNNPERLHQDCYEAFNIQVEGLRRRFEATPGDHMVIGVSG 378 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A + + +P T + +A A +ALG + + I Sbjct: 379 GLDSTHALIVAAKACDQMGLPRSTILGFTMPGFATGDATKANALALMRALGTGCEEIDIR 438 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 M E + EN+Q+ +R + L L+N ++ T + SE+++G Sbjct: 439 PAARQMLGDMGHPFAGGEPVYDVTFENVQAGLRTDYLFRLANQRSGFVIGTGDLSELALG 498 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD ++ + KT + L W T T + +IL+ S EL Sbjct: 499 WCTYGVGDQMSHYSVNPGVPKTLIQYLVRWV---VRTEQFDAETGKLLTAILDTEISPEL 555 Query: 474 RP------HQTDQESLPPYPILDDIIKRIVENEES------------------------F 503 P Q+ Q+ + PY + D + + + Sbjct: 556 VPVDAEGGMQSTQDKIGPYELHDFFLFHTMRYGRAPSKTAFLAWHAWKQAEAGLWPIEFP 615 Query: 504 INNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKITA---KSFGRDRLYP 550 +Y+ T+ S++KR P G K++A S D P Sbjct: 616 EEARNQYDLATIAKWLESFLFRFFQTSQFKRSAMPNGPKVSAGGSLSPRGDWRAP 670 >gi|254819841|ref|ZP_05224842.1| NAD synthetase [Mycobacterium intracellulare ATCC 13950] Length = 680 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 136/667 (20%), Positives = 253/667 (37%), Gaps = 113/667 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V+GD A N R E + G+ L +F EL +SGY ED+V + + Sbjct: 13 RVAACTHHTVIGDPAANAEAVLRMARECHDDGVALAVFPELTLSGYSIEDIVLQDLLLDD 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ + + + + +VVG P + + + N+ V++ G ++ V K LP Y EF+E Sbjct: 73 VDRAVADIVAASAELLPVLVVGAPVRHRHRIYNAAVVIHRGEVLGVAPKSYLPTYREFYE 132 Query: 126 KRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKKQ 166 +R G + + L + ICED++ Sbjct: 133 RRQIAPGDDERGTIRLAGVEAPFGPDLLFAASDVPGLVLHVEICEDMFVPIPPSAEAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +L+ SP + + R + S +Y G+ +L +DG + F+ Sbjct: 193 GATVLANLSGSPITIGRAEDRCLLARSASSRCLAAYVYSAAGAGESTTDLAWDGQTMVFE 252 Query: 225 GQQQLAFQMKH----------------FSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIP 268 LA + SE+ M + +++ + S P Sbjct: 253 NGVLLAMSERFPLGERRSVADVDLELLRSERLRMGTFDDNRRHHRTTAESFRRIEFRLDP 312 Query: 269 L------------------------QEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGID 304 Q+ YN V L ++ +F K++IG+SGG+D Sbjct: 313 PGGDIGLWREIERFPFVPADPQRLEQDCFEGYNIQVAGLEQRLRALDFPKIVIGISGGLD 372 Query: 305 SALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLV 359 S +A A+ +E ++ LP T ++ +A +ALG + + I + Sbjct: 373 STHALIVAARAMDREQRPRSDILAFTLPGFATGDRTKRNAIELCRALGVTFAEIDIRETA 432 Query: 360 NHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT 417 + E+ + EN+Q+ +R + L L+N ++L T + SE+ +G+ T Sbjct: 433 QLMLKEIDHPFSRGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELGLGWST 492 Query: 418 L-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH 476 GD +N + KT + L W S + + S+L+ + EL P Sbjct: 493 YGVGDQMSHYNVNGGVPKTLIQHLIRWVIS---SQQFESKVSEVLQSVLDTEITPELVPS 549 Query: 477 ------QTDQESLPPYPILDDIIKRIVE-----NEESFI-------------------NN 506 Q+ + + P+ + D + ++ ++ +F+ + Sbjct: 550 GEEEELQSSEAKVGPFALQDFSLFHVLRYGFRPSKIAFLAWHAWSDPEQGNWPPGFPEDK 609 Query: 507 DQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK-F 555 Y+ + +R+ V+ S++KR P G K++ A S D P +S + + Sbjct: 610 RPSYSLKEIRHWLQVFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARIW 669 Query: 556 RDHISEE 562 D I E Sbjct: 670 LDEIERE 676 >gi|148555509|ref|YP_001263091.1| NAD synthetase [Sphingomonas wittichii RW1] gi|148500699|gb|ABQ68953.1| NAD(+) synthase (glutamine-hydrolyzing) [Sphingomonas wittichii RW1] Length = 687 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 131/655 (20%), Positives = 230/655 (35%), Gaps = 113/655 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++ VGD+A N A A+ +G+DL++ EL +S Y +DL + + + Sbjct: 16 VRVGAGTPVASVGDVAANAAGILDLARRADAEGVDLLVLPELALSSYAIDDLHLQDAQLD 75 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 + + + + + D ++VG P + + N+ V++ G I+ V K LPNY E++ Sbjct: 76 RVEAELAGIVAASADLAPVLLVGAPIRRNGRLYNTAVVVSRGRILGVVPKSFLPNYREYY 135 Query: 125 EKRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLK 164 EKR F G + R D + ICED W Sbjct: 136 EKRWFAPGAGLTGLALRLCGQEVPFGPDLVFAAADLADFSFHVEICEDYWAPLPPSTAGA 195 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA L +L+AS K ++R + Q + Y G+ +L +DG + Sbjct: 196 MAGALILCNLSASNIIVGKARERALLAASQSTRAIAAYCYSASGPGESTTDLAWDGQAMI 255 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS----DDSASTMYIP---------- 268 + Q L + F + D + M +D A+ P Sbjct: 256 HELGQML-AESTRFGMDPELIAADVDVARLRLERMRMGTFNDCAAANGHPEARFRTIGFE 314 Query: 269 ---------------------------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + +N V L + ++IG+SG Sbjct: 315 HRPHRADVGLRRPVARFPFVPADPRELDADCYEAFNIQVDGLIKRFRSTRGKAMVIGVSG 374 Query: 302 GIDSALCAAIAVDALGKEN-----VQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A + + ++ +P T + +A A +ALG + + I Sbjct: 375 GLDSTHALIVAAKSCDRLGLPRSAIRGYTMPGFATGDATKANAWALMRALGITAEEIDIR 434 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 M E + EN+Q+ +R + L L+N ++ T + SE+++G Sbjct: 435 PAARQMLGDMGHPFAQGEPVYDVTFENVQAGLRTDYLFRLANQHDGFVVGTGDLSELALG 494 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD + + KT + L W G P T+ I +IL S EL Sbjct: 495 WCTYGVGDQMSHYAVNAGVPKTLIQYLIRWCVRTG---QFDPATDDILTAILGTEISPEL 551 Query: 474 RPH------QTDQESLPPYPILDDIIKRIVE-----------NEESFINNDQE------- 509 P Q+ + + PY + D + + ++ + D Sbjct: 552 VPADASGAIQSTESKVGPYELNDFFLHHVARLGLKPSKVAFLAWHAWKDADAGLWPAGFP 611 Query: 510 ------YNDETVRYVE-----HLLYGSEYKRRQAPVGTKITAKSFGR---DRLYP 550 Y+ T+R S++KR P G K++A + D P Sbjct: 612 DDLRNAYDLATIRSWLEKFLFRFFTISQFKRSAIPNGPKLSAAAALSPRGDWRAP 666 >gi|18310040|ref|NP_561974.1| NAD synthetase [Clostridium perfringens str. 13] gi|18144719|dbj|BAB80764.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 553 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 119/558 (21%), Positives = 223/558 (39%), Gaps = 88/558 (15%) Query: 84 IVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGY---------- 133 + VG P + + N ++ G ++ + K +PNYSEF+EKR F G+ Sbjct: 1 MAVGAPFLYRYSLYNCAYVILNGKVLGIVPKSYIPNYSEFYEKRWFTEGFNIKGLNVDLD 60 Query: 134 --------SNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHNKLK 185 ++ F+++++G ICED+W +L GA + +L+AS +K Sbjct: 61 FQKEVPFGTDLIFSFKNLKVGFEICEDLWVTIPPSSNLALMGANLICNLSASNELVSKSS 120 Query: 186 KRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKHFSEQNFMT 243 R +V Q + IY + + +L+F G + + + E + +T Sbjct: 121 YRKSLVQNQSARTMCSYIYSSAGVHESTTDLLFSGHMIIAENGTIIKENNRFKRENDLLT 180 Query: 244 --------EWHYDQQLSQWNYMSDDSASTMYIPLQ------------------------- 270 + + +S N +++ +IP Sbjct: 181 GIVDLFKLDAERIKNISFRNSTFNENNEPRFIPFNLENTEIKNFDREIDKHPFLPKSQYA 240 Query: 271 ---EEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQ 322 E N +L ++ N K +IG+SGG+DS L + V +EN+ Sbjct: 241 MEARCEEILNIQAAALAKRLEHTNLKKAVIGISGGLDSTLALLVVVKTFDMLNIPRENII 300 Query: 323 TIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENI 382 TI +P T+ ++ +A K L C + + I + F + ++ + EN+ Sbjct: 301 TITMPGFGTTDRTYNNAVTLCKELHCDFREINIVNAALQHFEDIGH--DKDIHDVTYENV 358 Query: 383 QSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLAS 442 Q+R R ILM L+N +L+ T + SE+++G+ T GD ++ + KT V L + Sbjct: 359 QARERTQILMDLANKEGGLLIGTGDLSELALGWCTYNGDHMSMYSVNCSIPKTLVRFLVN 418 Query: 443 WRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTDQESLPPYPILDDIIKR 495 + +H I++ IL+ S EL P Q ++ + PY + D + Sbjct: 419 YFANHEISNDAKEA----LLDILDTPVSPELLPKDKEGKIAQKTEDIVGPYELHDFFLYH 474 Query: 496 IVENEES-----FINNDQ---EYNDETVRYV----EHLLYGSEYKRRQAPVGTKITAKSF 543 +++ S F+ + +Y++ET++ + ++KR P G K+ + S Sbjct: 475 FIKHGSSPERILFLAKEAFKNDYDEETLKKWLDKFIRRFFTQQFKRSALPDGPKVGSISL 534 Query: 544 GR--DRLYPISNKFRDHI 559 D P + D + Sbjct: 535 SPRGDWRMPSDAVYNDFL 552 >gi|209543272|ref|YP_002275501.1| NAD synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209530949|gb|ACI50886.1| NAD+ synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 684 Score = 401 bits (1032), Expect = e-109, Method: Composition-based stats. Identities = 143/669 (21%), Positives = 241/669 (36%), Gaps = 117/669 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D A N+A+ + G+ L +F EL +SGY EDL + + Sbjct: 14 RVAGCTLPVALADPATNVARMADMVRACHADGVALAVFPELGVSGYTIEDLRQQDVLLDG 73 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 +A+ L + T D +V G P + + + N VIL G ++ V K LPNY EF+E Sbjct: 74 VGAALAALAAATADLVPVVVAGAPLRHGDALYNCAVILHRGTVLGVVPKSYLPNYREFYE 133 Query: 126 KRTFISGYS--------------------NDPIVFRDIRLGILICEDIWKNSNICKHLKK 165 R F G + + + I ICED+W + Sbjct: 134 ARQFAPGAGLRGQTIHVAGQTAPFGTDLLFEAEDVPGLVIAIEICEDLWVPAPPSTDAAL 193 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + + +AS K R + Q + +Y G+ +L +DG + Sbjct: 194 AGATVIANPSASDITVGKADTRDLLCRSQSARALCAYVYAAAGEGESTTDLAWDGQVSVY 253 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYD-----QQLSQWNYMSDDSA---------------- 262 + L + F + D Q+ ++ +D+ A Sbjct: 254 EN-GALLAETVRFPQGPNRATADIDLDLLRQERARMGSFADNRAARGLHATGGDTGWRRV 312 Query: 263 ------------------STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIG 298 ++P Q+ + V +L+ +Q +++IG Sbjct: 313 GFALAPPPGDLGLMRRIERFPFVPADPARLEQDCYEAWTIQVSALKQRLQATGTRRMVIG 372 Query: 299 LSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353 +SGG+DS +AV A G++ V +P TS + +A A +ALG L Sbjct: 373 VSGGLDSTQALLVAVRAADELGLGRDAVLAYTMPGFGTSAGTQSNAMALMQALGVTAAEL 432 Query: 354 PIHDLVNHFFSLMSQFLQEEPS--GIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEI 411 I M + EN+Q+ +R + L L+N +++ T + SE+ Sbjct: 433 DIRPTARMMLEQMGHPFASGVPQYDVTFENVQAGLRTDFLFRLANQHGGIVIGTGDLSEL 492 Query: 412 SVGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPS 470 ++G+ T GD +N L KT + L W S + SIL+ S Sbjct: 493 ALGWCTYGVGDQMSHYNVNAGLPKTLIQHLIRWVISARRVDDDAAG---VLASILDTEIS 549 Query: 471 AELRPH------QTDQESLPPYPILDDIIKRIVEN-----EESF---------------- 503 EL P Q+ +E + PY + D + ++ + +F Sbjct: 550 PELVPAGEDQALQSTEERIGPYALQDFTLFYVLRHGFRPSRIAFMAEIAWKDAGIGAWPP 609 Query: 504 ---INNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPIS 552 + EY+ T+R+ S++KR P G K+ A S D P Sbjct: 610 GFPADRRVEYDLPTIRHWLSVFLTRFFGFSQFKRSAMPNGPKVVAGGALSPRGDWRAPSD 669 Query: 553 NKFRDHISE 561 R + E Sbjct: 670 GNARLWLEE 678 >gi|94986688|ref|YP_594621.1| NH(3)-dependent NAD(+) synthetase [Lawsonia intracellularis PHE/MN1-00] gi|94730937|emb|CAJ54300.1| NH(3)-dependent NAD(+) synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 525 Score = 401 bits (1032), Expect = e-109, Method: Composition-based stats. Identities = 168/546 (30%), Positives = 276/546 (50%), Gaps = 40/546 (7%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 IA+ QL+ + GDI N + +A + G + + EL + G+P DL + I C Sbjct: 5 IALLQLHTITGDIIANTQNILQQVSKAKKDGATVCITPELSLCGHP--DLHEIPTIISTC 62 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH-- 124 +++ + + +GG I+VG + N+ ++ G I + K P +++F+ Sbjct: 63 INSLQQIAKEC-NGGPSIIVGSIETTPTNIYNTTFLIQNGQIHTLCKK---P-FTQFYPS 117 Query: 125 ---EKRTFISGYSNDPIVFRDIRLGILICEDIWKNSN-------ICKHLKKQGAEFLFSL 174 E+ I+ +N+ F I + + +K I ++ + + E + Sbjct: 118 IKKEEYILINNNNNNGFCFTSINKQLFLIVTGYKTLINYVCNKIIYQNEQLKKVEAILCP 177 Query: 175 NASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQLAFQMK 234 ++ P+ +++ +T ++ P+ + NQ G IF G S C + Q+ Q Sbjct: 178 SSEPFIASQIPHFFYELTSISDQLNKPLYFCNQAGEDKNYIFLGGSQCINSQETKNNQSL 237 Query: 235 HFSEQNFMTEWHYDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHK 294 F E + + H L ++ S+ + + A + ++ YV+KN F Sbjct: 238 LFQENYIVVKNHSSVSLKDMSFNSN-------------KLLWEALIHGIQQYVKKNGFSD 284 Query: 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 V++GLSGGIDS++ AA+AV+ALG+ V I++P ++S S+ DA A L K +LP Sbjct: 285 VVLGLSGGIDSSIVAALAVEALGEHRVHGILMPSPWSSEGSITDAELLANNLDVKTYLLP 344 Query: 355 IHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 IH L++ F +S+ P + ENIQSRIRG +LMA+SN M+L+T NKSE +VG Sbjct: 345 IHTLIDSFTHSLSELFIGYPPDVTEENIQSRIRGVLLMAISNKFGWMVLSTGNKSERAVG 404 Query: 415 YGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 Y TLYGD GG P+ DLYKT+V+ LA W N ++IP S+L K PSAELR Sbjct: 405 YCTLYGDTCGGLAPIGDLYKTEVYHLAQWYNQSKQ-------KDIIPTSVLTKPPSAELR 457 Query: 475 PHQTDQESLPPYPILDDIIKRIVENEESFINNDQEYNDETVRYVEHLLYGSEYKRRQAPV 534 P Q DQ+SLPPY LD I++ ++ + I+ + N+ + ++ L+ + +KR Q P Sbjct: 458 PGQLDQDSLPPYKELDFILQMLLSKNPTNIDQEL-LNNPKLNDIKRLIQKNAFKRMQGPP 516 Query: 535 GTKITA 540 I+ Sbjct: 517 SLVISN 522 >gi|15827765|ref|NP_302028.1| NAD synthetase [Mycobacterium leprae TN] gi|221230242|ref|YP_002503658.1| NAD synthetase [Mycobacterium leprae Br4923] gi|18202769|sp|Q9CBZ6|NADE_MYCLE RecName: Full=Glutamine-dependent NAD(+) synthetase; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing] gi|13093317|emb|CAC30413.1| possible NAD synthase [Mycobacterium leprae] gi|219933349|emb|CAR71557.1| possible NAD synthase [Mycobacterium leprae Br4923] Length = 680 Score = 401 bits (1032), Expect = e-109, Method: Composition-based stats. Identities = 134/669 (20%), Positives = 258/669 (38%), Gaps = 115/669 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A + +GD N A R + + G+ + +F EL +SGY ED++ + ++ Sbjct: 12 VRVAACTHHASIGDPTTNAASVLRLARQCHDDGVAVAVFPELTLSGYSIEDILLQDLLLE 71 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A + + + D +V+G P + + + N+ VI+ G ++ V K LP Y EF+ Sbjct: 72 AVEDTVLDIVVASADLLPVLVIGAPLRYRHRIYNTAVIIHRGVVLGVAPKSYLPTYREFY 131 Query: 125 EKRTFISG-YSNDPIVFRDIR------------------LGILICEDIWKNSNICKHLKK 165 E+R G + I D+R L + ICED++ Sbjct: 132 ERRQLAPGDDEHGTIGIGDLRAPFGPDLLFAAADLLGLVLHVEICEDMFVPVPPSAEAAL 191 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + +Y G+ +L +DG + + Sbjct: 192 AGATVLANLSGSPITIGRAEDRRLLARSASLRCLAAYVYAAAGEGESTTDLAWDGQTMIW 251 Query: 224 DGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS------------------------- 258 + L + + F + + D +L + + Sbjct: 252 EN-GVLLAESERFPKGEHRSVADVDTELLRSERLRMGTFNDNRRRHRALVEPFRRIEFRL 310 Query: 259 ----------DDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGG 302 + ++P Q+ YN V L ++ ++ KV+IG+SGG Sbjct: 311 EPPVGNIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGG 370 Query: 303 IDSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHD 357 +DS +A A+ +E ++ LP T ++ +A +ALG + + I D Sbjct: 371 LDSTHALIVAARAMDREGRPRSDILAFTLPGFVTGDRTKSNATELCRALGVTFTEIDIRD 430 Query: 358 LVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGY 415 + E + EN+Q+ +R + L L+N ++L T + SE+ +G+ Sbjct: 431 TATLMLKKIGHPFSRGEVSYDVTFENVQAGVRTDYLFRLANQHGGIVLGTGDLSELGLGW 490 Query: 416 GTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELR 474 T GD +N + KT V L W + +S + + S+L+ + EL Sbjct: 491 STYGVGDQMSHYNINAGVPKTLVQHLIRWVIA---SSQFEEQVDKVLQSVLDTEITPELI 547 Query: 475 PH------QTDQESLPPYPILDDIIKRIVE-----NEESFI------------------- 504 P Q+ + + P+ + D + +++ ++ +F+ Sbjct: 548 PSDGEEKLQSTEAKVGPFALQDFSLFQVLRYGFRPSKIAFLTWHAWSDPNCGKWPPGFPE 607 Query: 505 NNDQEYNDETVRY-----VEHLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK 554 + Y+ + +R+ V+ S++KR P G K++ A S D P +S + Sbjct: 608 DKRLSYSLKEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSAR 667 Query: 555 -FRDHISEE 562 + D I E Sbjct: 668 IWLDEIERE 676 >gi|330993009|ref|ZP_08316947.1| Glutamine-dependent NAD(+) synthetase [Gluconacetobacter sp. SXCC-1] gi|329759779|gb|EGG76285.1| Glutamine-dependent NAD(+) synthetase [Gluconacetobacter sp. SXCC-1] Length = 681 Score = 401 bits (1032), Expect = e-109, Method: Composition-based stats. Identities = 141/664 (21%), Positives = 236/664 (35%), Gaps = 112/664 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A L + D N + ++ G L +F EL +SGY EDL + + Sbjct: 14 RVAACTLPVALADPMENARRIHEGIVACHQAGAVLAVFPELGLSGYAIEDLRQQDVLLDQ 73 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A L T ++VG P + + N + L G+I+ V K LPNY EF+E Sbjct: 74 VMEAAAWLARQTAGLLPLVLVGAPVVWEGALYNCAIALHDGHIVGVIPKSYLPNYREFYE 133 Query: 126 KRTFISG----------------YSNDPIV----FRDIRLGILICEDIWKNSNICKHLKK 165 R F +G + D + R + + +CED+W H Sbjct: 134 ARQFTAGAGLRGGHIMLGARAVPFGTDLLFRARGVRGLVIAAELCEDMWVPQPPAVHAAL 193 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA + +L+AS K + R + + +Y G+ ++ +DG + F Sbjct: 194 AGATVIANLSASNITVGKARTRTLLCQSHSARCLCAYVYAAAGEGESTTDVAWDGQASIF 253 Query: 224 DGQQQLAFQMKHF-----------------SEQNFM-------------TEWH------- 246 + L Q F E+ M EW Sbjct: 254 ENGVTL-AQSARFPTGLVTLLADVDLDLLRQERLRMGTFADNRAHVAAAAEWRSVELVLS 312 Query: 247 ---YDQQLSQWNYMSDDSASTMYIPLQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 D L + S + Q+ + V +L+ V + ++IG+SGG+ Sbjct: 313 PPSTDLGLKRAIPRFPFVPSDPALLDQDCYEAFTIQVTALKRRVLASRAKTLVIGVSGGL 372 Query: 304 DSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS +A A G++ V +P TS + ++A ALG + + I Sbjct: 373 DSTHALLVAARAADECGLGRQAVLGYTMPGFGTSGGTRDNAHELMAALGVQAHEIDIRPA 432 Query: 359 VNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 M E + EN+Q+ +R + L L+N S +++ T + SE+++G+ Sbjct: 433 ARLMLEQMGHPFAGGEAVYDVTFENVQAGLRTDFLFRLANQSGGIVIGTGDLSELALGWC 492 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD +N L KT + L W +HG + T + +IL S EL P Sbjct: 493 TYGVGDQMAHYNVNAGLPKTLIQHLIRWVMAHGRET---ARTCTVLDAILATEISPELVP 549 Query: 476 H------QTDQESLPPYPILDDIIKRIVE-----NEESFINNDQEYN----------DET 514 Q+ + + PY + D + ++ ++ +F+ + E Sbjct: 550 ATAGQAVQSTESLIGPYALHDFTLFHVLRYGFRPSKIAFMALHAWGDAARGDWPPGFPEG 609 Query: 515 VRYVE--------------HLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISNKFRD 557 R V S++KR P G K+ A S D P R Sbjct: 610 GRKVYALSEIRHWLGVFLNRFFGFSQFKRSAMPNGPKVLAGGALSPRGDWRAPSDGNARI 669 Query: 558 HISE 561 + E Sbjct: 670 WVEE 673 >gi|238024670|ref|YP_002908902.1| NAD synthetase [Burkholderia glumae BGR1] gi|237879335|gb|ACR31667.1| NAD+ synthase [Burkholderia glumae BGR1] Length = 704 Score = 401 bits (1032), Expect = e-109, Method: Composition-based stats. Identities = 138/650 (21%), Positives = 252/650 (38%), Gaps = 110/650 (16%) Query: 18 DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSDT 77 D A N+ R +A +G + + EL +S Y ++L F+++ + AI L++ + Sbjct: 26 DPAANLQATLRLARDAAGRGALVTILPELGLSAYTNDELFFQRALLDGVKRAIGKLRAAS 85 Query: 78 HDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEKRTFISGYS--- 134 + IV G P + + N+ V+L G I+ V K LPNY EF+EKR F SG Sbjct: 86 AELPGLIVAGAPLEWSGRLYNAAVVLHRGRILGVVPKSYLPNYGEFYEKRYFASGLGVTG 145 Query: 135 ------------NDPIVFR-----DIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNAS 177 ++FR ++ LG+ ICED+W + GA + +L+AS Sbjct: 146 GTLRLDGAEVPFGTDLLFRADDYPELVLGVEICEDLWAPVPPSTYAAHAGATVIANLSAS 205 Query: 178 PYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDGQQQLAFQMKH 235 K + R V + +Y G+ +L +DG + + ++ + + Sbjct: 206 NITVGKSEYRRLHVRSHSARCQAAYLYSAAGCGESTTDLAWDGHALVCE-SGEILAETER 264 Query: 236 FSEQNFMTEWHYDQQLSQWNYMS----DDSA----------------------------- 262 F++ + D Q + DD A Sbjct: 265 FADTAQLLVADLDLQRIMQERLRVQTFDDCARALGGSAFRNVGFALAPPRGPSGPLQRRL 324 Query: 263 -STMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSAL---CAAIA 312 ++P E + L ++ +V+IG+SGG+DS A+ Sbjct: 325 DRFPFVPADVAMLDANCEETFMIQSHGLAKRLRATGLEQVVIGVSGGLDSTYALLVCALT 384 Query: 313 VDALG--KENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLMSQFL 370 +D LG + N+ LP TS +L++A A LG + I + + + + Sbjct: 385 MDRLGLDRRNILAYTLPGYATSRHTLDNAWALMHVLGVSAREIDIKPVSDRTLADIGHPA 444 Query: 371 --QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTL-YGDMSGGFN 427 E + EN+Q+ R L L+N ++A+++ T + SE+++G+ T GD +N Sbjct: 445 AQGEARYDVTYENVQAGARSAYLFRLANANRAIVIGTGDLSELALGWCTYGVGDQMSHYN 504 Query: 428 PLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH---QTDQESLP 484 + KT + Q+ W G I I+E S EL P Q+ ++++ Sbjct: 505 VNGSVPKTLIQQMVRWLADRQR---FGADAAGILRRIVETEISPELVPGNASQSTEQAIG 561 Query: 485 PYPILDDIIKRIVE----------------------NEESFINNDQEYNDETVRY----- 517 PY + D + + + +++ Y+ ++ Sbjct: 562 PYALQDFNLYHVTRYGFGPAKIAFLAWHAWHDAEAGDWPPLMDSRPAYDLAAIKRWLVVF 621 Query: 518 VEHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYP---ISNKFRDHISE 561 V+ GS++KR P G K+ ++ S D P ++ + D ++ Sbjct: 622 VKRFFEGSQFKRSALPNGPKVAAGSSLSPRGDWRAPSDSVAQAWLDELTR 671 >gi|296129628|ref|YP_003636878.1| NAD+ synthetase [Cellulomonas flavigena DSM 20109] gi|296021443|gb|ADG74679.1| NAD+ synthetase [Cellulomonas flavigena DSM 20109] Length = 686 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 131/657 (19%), Positives = 241/657 (36%), Gaps = 113/657 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + V D A N A A + G+ + + EL +SGY +DL + + A Sbjct: 13 RVAACTVPVTVADPAANAAAVLDAARACHDDGVAVAVMPELCLSGYAVDDLFLQDVLLDA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ T+ + + IVVG P VLN+ V++ G ++ V K LP Y EF+E Sbjct: 73 VRDALATIVEASRELLPVIVVGAPLAHGTRVLNTAVVVHRGRVLGVAPKSYLPTYREFYE 132 Query: 126 KRTFISGYSNDPIVF-------------------RDIRLGILICEDIWKNSNICKHLKKQ 166 +R F G + L + +CED+W H Sbjct: 133 RRWFAPGDDVRGTTTVAGQEVPIGPDLLFAAADLPGLVLHVEVCEDMWVPVPPSTHAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +L++SP + ++R +V + +Y G+ +L +DG + ++ Sbjct: 193 GATVLVNLSSSPVTVGRAEERRLLVRSASARCLAAYVYAAAGQGESSTDLAWDGQTLVYE 252 Query: 225 GQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS----------------------- 261 +L + K F++ +T D + + + Sbjct: 253 L-GELLAEGKRFADGQVLTVADVDLDRLRQERLRTGTFDDNRRALGLAAAGGSHRTVPFT 311 Query: 262 --------------ASTMYIPLQ------EEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 ++P + YN V +L ++ K++IG+SG Sbjct: 312 LEPPPGDVGLRRAVDRFPFVPDDPARLALDCYESYNIQVSALEQRLRAVGGAKIVIGVSG 371 Query: 302 GIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A+ + ++ +P TS +L A A ++LG + + I Sbjct: 372 GLDSTHALIVAARAMDRLGRPRSDILAFTMPGFATSDATLASALALMQSLGTTAETIDIR 431 Query: 357 DLVNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + + E E + EN+Q+ +R + L +N ++L T + SE+++G Sbjct: 432 PAARQMLADLGHPAGEGAEQYDVTFENVQAGLRTDYLFRAANQRGGIVLGTGDLSELALG 491 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD + + KT + L W G T + ++ + S EL Sbjct: 492 WCTYGVGDQMSHYGVNAGVPKTLIQHLIRWVVGEG---HFDDATNEVLLRVVGQEISPEL 548 Query: 474 RP------HQTDQESLPPYPILDDIIKRIVENEES------------------------F 503 P Q+ ++++ PY + D + +++ + Sbjct: 549 VPVREGERMQSTEDTIGPYALHDFALFQVLRHGMRPSRIAFLAWHAWHDARAGAWPPGWP 608 Query: 504 INNDQEYNDETVRYVE----HLLYGSEYKRRQAPVGTKITA---KSFGRDRLYPISN 553 + EY+ TVR + S++KR P G K+ A S + P Sbjct: 609 ADRRPEYDLPTVRRWLEVFVRRFFASQFKRSALPNGPKVAAGGTLSPRSEWRMPSDA 665 >gi|328955314|ref|YP_004372647.1| NAD+ synthetase [Coriobacterium glomerans PW2] gi|328455638|gb|AEB06832.1| NAD+ synthetase [Coriobacterium glomerans PW2] Length = 693 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 131/659 (19%), Positives = 240/659 (36%), Gaps = 110/659 (16%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++A A V D+ N A A A RQG + EL ++GY +DL ++ I Sbjct: 22 FRVAAATPAIRVADVEANAAAALAHIRAAARQGAGALALPELCLTGYTCQDLFLDRTLID 81 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A ++ + + T D +G P + N + AG ++ + K NLPN+ EF+ Sbjct: 82 AAERSLRDILAQTRDLPLLFTIGLPVAHGSALYNCCAVCCAGRLLGLSAKRNLPNHGEFY 141 Query: 125 EKRTFISGYSNDPIVFR----------------------DIRLGILICEDIWKNSNICKH 162 E R F ++ + R ++ +G+ ICED+W Sbjct: 142 EARWFSPAPADAVLSVRLAGQSAPLGWGLVFCCSDDGMDEVAIGVEICEDLWVADPPSVE 201 Query: 163 LKKQ-GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGA 219 + GA + + +AS K R +V+ Q + + +Y + G+ +L+F G Sbjct: 202 MALARGAAVVLNASASDEIIGKADYRSSLVSAQSARLFCAYVYADAGEGESTTDLVFAGE 261 Query: 220 SFCFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDSAS---------------- 263 + + + + + F+ + D+ ++ S +A Sbjct: 262 NLIAENGRTI-AETDLFTTDMASADIDLDRLCAERRRSSTWTARVAEGSDARSVPFSFTG 320 Query: 264 --------------------------TMYIPLQEEEADYNA---------CVLSLRDYVQ 288 +P + D A L+ + Sbjct: 321 SARALASDSRAPAEALMRSGLTTSRIFPRLPFVPADTDDLAARCELILGLQAAGLKTRLS 380 Query: 289 KNNFHKVIIGLSGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACA 343 + +++IG+SGG+DS L + A + + + +P T+ ++ +A A Sbjct: 381 HTHAERIVIGVSGGLDSTLALLVCARAFDDLGLARAGIVAVSMPGFGTTGRTKGNAERLA 440 Query: 344 KALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 ++L + +PI V F + + + EN Q+R R ILM L+N A+++ Sbjct: 441 RSLDATFREIPIDAAVRQHFRDIGH--DARLTDVTYENSQARERTQILMDLANQLGALVI 498 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 T + SE+++G+ T GD + + KT V L + L+ Sbjct: 499 GTGDLSELALGWATYNGDHMSMYGVNASVPKTLVRHLVGYVAEASAGEIADTLS-----D 553 Query: 464 ILEKSPSAELRP-------HQTDQESLPPYPILDDIIKRIVENEES--------FINNDQ 508 IL+ S EL P Q +E + PY + D + ++ S + D Sbjct: 554 ILDTPVSPELLPPEPDGAIAQRTEELVGPYELHDYFLYYLLRFGLSPGRIFRTACRSFDG 613 Query: 509 EYNDETV----RYVEHLLYGSEYKRRQAPVGTKITAKSFGR--DRLYPISNKFRDHISE 561 Y+ T+ R + ++KR P G K+ + S D P R + E Sbjct: 614 TYDPSTILSWLRVFYRRFFSQQFKRSALPDGPKVGSVSLSPRGDWRMPSDASARMWLDE 672 >gi|300113681|ref|YP_003760256.1| NAD+ synthetase [Nitrosococcus watsonii C-113] gi|299539618|gb|ADJ27935.1| NAD+ synthetase [Nitrosococcus watsonii C-113] Length = 697 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 131/661 (19%), Positives = 233/661 (35%), Gaps = 115/661 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 ++ +A V D + N K R +A Q L+ F EL +S Y +DL +++ + Sbjct: 21 IRATVAVPELRVADPSFNAQKTRDLLGQAADQHSLLVAFPELGLSAYSCDDLFQQQALLA 80 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 C + + + + +VG P Q + + N V+ G ++ V K +PNY EF+ Sbjct: 81 ECQQGLRQILNYSKQLPLIGIVGLPLQVEHLLFNCAVVFYRGRLLGVVPKTYVPNYREFY 140 Query: 125 EKRTFISGYSN-----DPIVFRDIRLG----------------ILICEDIWKNSNICKHL 163 E R F D +++ G + ICED+ + Sbjct: 141 ELRQFAPADYALRECIDLCDQKEVPFGSYLLFQVAEQPLLTFHVEICEDLRSPIPPSSYA 200 Query: 164 KKQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASF 221 GA + +L+AS K R + Q S +Y G+ +L +DG Sbjct: 201 ALAGATVIINLSASNITVGKDDYRRLLANSQSSRCLAAYLYTAAGTGESTTDLAWDGHGM 260 Query: 222 CFDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMSDDS-------------------- 261 ++ L + + FS + + D Q + M +S Sbjct: 261 VYENGDCL-AETERFSYTSQLASADIDLDRLQQDRMRQNSFGQSRARHRDRLTAFRTIRF 319 Query: 262 ----------------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGL 299 Y+P + Y+ + L +Q + KV+IG+ Sbjct: 320 SAPLPAQESVLLKRIYERFPYVPSDPINRDRRCQEVYDIQIQGLVKRLQAAHTDKVVIGI 379 Query: 300 SGGIDSALCAAIAVDAL-----GKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLP 354 SGG+DS I A+ + +V +P TS ++L A A+GC+ + Sbjct: 380 SGGLDSTQALIICARAMDSMKLPRRHVLAYTMPGFATSERTLNQARQLMAAVGCQAHEID 439 Query: 355 IHDLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEIS 412 I + E + EN+Q+ R + L L+N A+++ T + SE++ Sbjct: 440 IRPSCLQMLKDLGHPYAQGEPVYDVTFENVQAGERTSHLFRLANFHSALVVGTGDLSELA 499 Query: 413 VGYGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSA 471 +G+ T GD ++ + KT + L W + L P I I S Sbjct: 500 LGWCTYGVGDHMSHYHVNASVPKTLIQYLIGWVARN---QSLSPEASAILEEIRATDISP 556 Query: 472 EL-------RPHQTDQESLPPYPILDDIIKRIVE-----NEESFINNDQ----------- 508 EL +P Q +E + PY + D + ++ + +F+ Sbjct: 557 ELVPHKSKEQPGQRSEEVIGPYELQDFHLYYLLRFGYDPTKVAFLAWSAWHDRTCGAWPG 616 Query: 509 -------EYNDETVRYVE-----HLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISN 553 +Y ++ S++KR P G K+ + S D P + Sbjct: 617 IPETQRNQYPLADIKRWLGVFLKRFFQSSQFKRSCVPNGPKVGSGGSLSPRGDYRAPSDS 676 Query: 554 K 554 + Sbjct: 677 E 677 >gi|312130302|ref|YP_003997642.1| nad+ synthetase [Leadbetterella byssophila DSM 17132] gi|311906848|gb|ADQ17289.1| NAD+ synthetase [Leadbetterella byssophila DSM 17132] Length = 660 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 159/646 (24%), Positives = 263/646 (40%), Gaps = 99/646 (15%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 LK+ A LN D AGN +A EA +G+ ++ EL ISGY ED + Q Sbjct: 2 LKVGAAALNQTPLDWAGNRKNILKAIHEAKAEGVQILCLPELCISGYGCEDAFYAPDVTQ 61 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 ++ + + G VG P + + + N+ ++ G ++ K +LPNY F+ Sbjct: 62 RSLESLAIVAEAS--VGIVTCVGLPIRLRNKIYNAAALITDGEVLGFVLKQHLPNYGVFY 119 Query: 125 EKRTFI---SGYSNDP-------------IVFRDIRLGILICEDIWKNSNICKHLKKQGA 168 E R F G + RLGI ICED W L ++G Sbjct: 120 EDRWFQRWKPGKTGSISWKGKTYPVGDLFFEIGGYRLGIEICEDAWVPQRPGSKLNEKGV 179 Query: 169 EFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDE-LIFDGASFCFDGQQ 227 +F+ + +ASP+ K + R ++VT IY N +G + LIFDG + Sbjct: 180 DFILNPSASPFSFGKFQTREKLVTDASRAFSCVYIYSNLLGNESGRLIFDGDTMI-STGG 238 Query: 228 QLAFQMKHFSEQNF-----------------------MTEWHYDQQLSQWNYMSDDSAST 264 +L FS ++ + ++ + + QW +++ Sbjct: 239 ELVASSDRFSYADYTLTTAIVEVETNRIEQAKIKSEYLQDFSFISKEHQWEETFTPTSTK 298 Query: 265 MYIPLQEEEADY------NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAV----- 313 + E A L L DY++K+ + LSGG DS+ C A+ Sbjct: 299 ALLEPFERGGHLKEEEFARAVSLGLFDYLRKSRSFGFTLSLSGGADSSACLALCTLMLRL 358 Query: 314 --DALGKEN-------------------VQTIMLPYKY-----TSPQSLEDAAACAKALG 347 +++G E +Q++++ Y +S +L+ AAA AK G Sbjct: 359 AEESVGLEKLKDKLSYIPGVKECQDLAQIQSLLMITLYQGTRNSSEDTLQSAAALAKDCG 418 Query: 348 CKYDVLPIHDLVNHFFSLMSQFLQE----EPSGIVAENIQSRIRGNILMALSNHSKAMLL 403 ++ V I DLV+ + ++Q + E I +NIQ+R+R + L+N +LL Sbjct: 419 ARFFVFDIDDLVSSYTEKVAQQIDRKLSWETDDIPLQNIQARVRAPGVWLLANIHNHLLL 478 Query: 404 TTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPS 463 TTSN+SE +VGY T+ GD +G P+ + KT + W G L Sbjct: 479 TTSNRSEAAVGYCTMDGDTAGSIAPISGIDKTWLRTWLVWLEKVGCEVKGKHLRLEGLKY 538 Query: 464 ILEKSPSAELRP---HQTDQESLPPYPILDDIIKRIVENEESFINNDQE------YNDE- 513 + P+AELRP QTD++ L PYP+L+ + + + S + + Y+ E Sbjct: 539 VNALQPTAELRPIERTQTDEKDLMPYPVLNQLEILGIRDHHSPLECFKRMEKLYNYSREE 598 Query: 514 ---TVRYVEHLLYGSEYKRRQAPVGTKITAKSFG-RDR-LYPISNK 554 R L +++KR + G + + R +PI + Sbjct: 599 LYTWTRRFFQLWSRNQWKRERYAPGFHLDTHNLDPRSWCRFPILSG 644 >gi|332185259|ref|ZP_08387008.1| carbon-nitrogen hydrolase family protein [Sphingomonas sp. S17] gi|332014983|gb|EGI57039.1| carbon-nitrogen hydrolase family protein [Sphingomonas sp. S17] Length = 684 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 134/655 (20%), Positives = 237/655 (36%), Gaps = 113/655 (17%) Query: 5 LKIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQ 64 +++A A VGD N A EA+ +G+DLI+F EL ++ Y +DL + + + Sbjct: 15 IRVAAATPAASVGDPHANAAAMLDLAREADEKGVDLIVFPELSLTSYAIDDLHLQSAMHR 74 Query: 65 ACSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFH 124 A A+ + + ++VG + N+ +++ G I+ V K LPNY E++ Sbjct: 75 ATLDALGEMVDASAALSPVMLVGAALPRNGRLYNTAIVIARGRILGVVPKTFLPNYREYY 134 Query: 125 EKRTFISGYSNDPIVFR--------------------DIRLGILICEDIWKNSNICKHLK 164 EKR F SG + L ICED W + Sbjct: 135 EKRWFASGAGLVGLTIDLDGQSVPFGTDLIFAAEDLPGFVLHAEICEDYWAPTPPSTMGA 194 Query: 165 KQGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFC 222 GA +L+AS K + R + Q + +Y G+ +L +DG Sbjct: 195 LAGATICCNLSASNIVIGKARDRAMLAAAQSARAACAYVYSAAGIGESTTDLAWDGQGLI 254 Query: 223 FDGQQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYMS----DDSASTMYIPLQ-------- 270 + +QL + + F+ +T D + + +DSA+ P Sbjct: 255 HELGEQL-AESERFTRTPALTIADIDVERVVQERLRVGTFNDSAAFAGHPENRFRRIGFI 313 Query: 271 -----------------------------EEEADYNACVLSLRDYVQKNNFHKVIIGLSG 301 + YN V +L ++ + ++IG+SG Sbjct: 314 HGTEPADRGLCRPVERFPFVPNDPARRDADCYEAYNIQVEALAKRLEASQAKTLVIGVSG 373 Query: 302 GIDSALCAAIAVDA-----LGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 G+DS +A A G++ + +P T + A A +ALG + + I Sbjct: 374 GLDSTHALIVAAKATDRLGWGRDRILAFTMPGFATGEGTKAHAWALMRALGVSAEEIDIR 433 Query: 357 DLVNHFFSLMSQFL--QEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVG 414 + + E + EN+Q+ +R + L L+N ++L T + SE+++G Sbjct: 434 PAAHQMLEDIRHPFAAGEPVHDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSELALG 493 Query: 415 YGTL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL 473 + T GD + + KT + L W G T + +IL + S EL Sbjct: 494 WCTYGVGDQMSHYAVNAGVPKTLIQFLIRWCIRTG---QYDDATNRVLTAILAQEISPEL 550 Query: 474 RPH------QTDQESLPPYPILDDIIKRIVEN------------------------EESF 503 P Q+ + + PY + D ++ + E+ Sbjct: 551 VPADASGALQSTESMIGPYALNDFFAHYVIRHGLMPSKIAFLAWHAWRDAEAGGWPEDLP 610 Query: 504 INNDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP 550 + Y+ ++R+ S++KR P G K++ A S D P Sbjct: 611 EDARVAYDLPSIRHWLERFLTRFFQTSQFKRSALPNGPKVSPGGALSPRGDWRAP 665 >gi|118467678|ref|YP_888881.1| NAD synthetase [Mycobacterium smegmatis str. MC2 155] gi|118168965|gb|ABK69861.1| glutamine-dependent NAD+ synthetase [Mycobacterium smegmatis str. MC2 155] Length = 680 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 129/668 (19%), Positives = 257/668 (38%), Gaps = 115/668 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A + + D N R + + G+ + +F EL +SGY ED++ + + +++ Sbjct: 13 RLAACTHHTSLADPPANAESVLRLAQACHDDGVAVAVFPELTLSGYSIEDILLQDTLLES 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ L + T +V+G P + + + N+ V++ G ++ V K LP Y EF+E Sbjct: 73 VQEALTELVAATSVLTPVLVIGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYE 132 Query: 126 KRTFISGYSNDPIV-------------------FRDIRLGILICEDIWKNSNICKHLKKQ 166 +R +G + + L + ICED++ Sbjct: 133 RRQMAAGDQTRGTIRVAGAEVPFGPDLLFAASDVPGLVLHVEICEDMFVPIPPSAQAALA 192 Query: 167 GAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFD 224 GA L +L+ SP + + R + + +Y G+ +L +DG + ++ Sbjct: 193 GATVLANLSGSPITVGRAEDRCLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIWE 252 Query: 225 GQQQLAFQMKHFS--EQNFMTEWHYDQQLSQWNYMS------------------------ 258 L + + F E+ + + + ++ M Sbjct: 253 N-GNLLAESERFPRGERRAVADVDLELIRNERVRMGTFDDNARHHGAAVDAFRRIEFQLD 311 Query: 259 ---------DDSASTMYIP------LQEEEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 + ++P Q+ YN V L ++ N+ K+++G+SGG+ Sbjct: 312 PPTGDIGLLREIERFPFVPSNYERLQQDCYEAYNIQVSGLEQRLRALNYPKIVLGVSGGL 371 Query: 304 DSALCAAIAVDALGKE-----NVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS +A A+ +E ++ LP T ++ +A ++ALG ++ + I Sbjct: 372 DSTHALIVAARAMDREGRPRSDILAFTLPGFATGDRTKNNAVRLSRALGVTFEEIDIKQT 431 Query: 359 VNHFFSLMSQFLQ--EEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + M E+ + EN+Q+ +R + L L+N ++L T + SEI++G+ Sbjct: 432 AQLMLTEMGHPFGRGEKVYDVTFENVQAGLRTDYLFRLANQRGGIVLGTGDLSEIALGWS 491 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP 475 T GD +N + KT + L W S G + + S+L+ + EL P Sbjct: 492 TYGVGDQMSHYNVNGGVPKTLIQHLIRWVISSGEFN---DEVNEVLQSVLDTEITPELVP 548 Query: 476 H------QTDQESLPPYPILDDIIKRIVE-----NEESFIN------------------- 505 Q+ + + PY + D + +++ ++ +F+ Sbjct: 549 TGEDEEIQSSEAKVGPYALQDFSLFQVLRFGFRPSKVAFLAWHAWHDVGAGDWPPGFPEH 608 Query: 506 NDQEYNDETVRYVE-----HLLYGSEYKRRQAPVGTKIT---AKSFGRDRLYP--ISNK- 554 Y+ + +R+ S++KR P G K++ A S D P +S + Sbjct: 609 ERPSYSLKEIRHWLQVFAQRFYSFSQFKRSAMPNGPKVSHGGALSPRGDWRAPSDMSARI 668 Query: 555 FRDHISEE 562 + D I E Sbjct: 669 WLDEIERE 676 >gi|219849407|ref|YP_002463840.1| NAD synthetase [Chloroflexus aggregans DSM 9485] gi|219543666|gb|ACL25404.1| NAD+ synthetase [Chloroflexus aggregans DSM 9485] Length = 691 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 144/659 (21%), Positives = 242/659 (36%), Gaps = 115/659 (17%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A+A + + A N + R A +G ++LF EL +S Y +DL + + + A Sbjct: 17 RLAVAIPAVRIAEPAFNGERTRALARRAADEGAVVVLFPELGLSAYSNDDLFQQTTLLDA 76 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 A+ L + THD A ++VG P + + + N V L +G I+ V K LPNY EF+E Sbjct: 77 VEQALIDLAAATHDLNALLLVGAPLRHEGRLFNCAVALCSGQIVGVTPKSYLPNYREFYE 136 Query: 126 KRTFISGYS--NDPIVFRDIR------------------LGILICEDIWKNSNICKHLKK 165 KR F + D I R + + +CED+W Sbjct: 137 KRHFAAARDAIGDTISVAGQRAPFGTNILYEAEAIPGLAVYVELCEDLWTPLPPSTFAAL 196 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+AS K R + Q + +Y G+ +L +DG + Sbjct: 197 AGATVLCNLSASNITIGKADYRRALCLSQSARTIAAYLYSAAGLGESTTDLAWDGHALIC 256 Query: 224 DGQQQLAFQMKHF--SEQNFMTEWHYDQQLSQWNYMSDDS-------------------- 261 + +L + + F EQ + ++ + + S Sbjct: 257 EN-GELLAESRRFCDDEQIIFADVDLERLIQDRMRQTSFSDSIGDYRERLRAMRRITLPI 315 Query: 262 ------------ASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGI 303 A Y+P YN V L ++ KV+IG+SGG+ Sbjct: 316 KPPFVTDLRRTVARFPYVPDDPATRDERCYEAYNIQVHGLIQRMRSAGVTKVVIGVSGGL 375 Query: 304 DSALCAAIAVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDL 358 DS +AV A+ + +NV +P TS Q+ +A A ALG + I Sbjct: 376 DSTQALIVAVRAMDRLGLSRQNVLAYTMPGFATSAQTHRNAQALMAALGVSAYEIDIRPS 435 Query: 359 VNHFFSLMSQFLQE--EPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYG 416 + E + EN+Q+ R + L L+N+ A+++ T + SE+++G+ Sbjct: 436 ALQMLRDLGHPAGEGKPVYDVTFENVQAGERTSHLFRLANYHNAIVVGTGDLSELALGWC 495 Query: 417 TL-YGDMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAEL-- 473 T GD +N + KT + L + G G + IL S EL Sbjct: 496 TYGVGDQMSHYNVNASVPKTLIQHLIRYVIRSGEFGG---EVNKVLEEILATEISPELVP 552 Query: 474 -------RPHQTDQESLPPYPILDDIIKRIVE-----NEESFIN---------------- 505 +P Q +E + PY + D + I ++ +F+ Sbjct: 553 AADNNDDKPAQRTEEIIGPYDLQDFNLYYITRYGFRPSKVAFLAMHAWRDADRGSWPEGL 612 Query: 506 ---NDQEYNDETVRYV-----EHLLYGSEYKRRQAPVGTKI---TAKSFGRDRLYPISN 553 + Y+ + + S++KR P G K+ + S D P Sbjct: 613 PEHKRRAYDLPIILHWLRVFLYRFFQISQFKRSAMPNGPKVGSGGSLSPRGDWRAPSDA 671 >gi|313898307|ref|ZP_07831844.1| NAD+ synthase [Clostridium sp. HGF2] gi|312956689|gb|EFR38320.1| NAD+ synthase [Clostridium sp. HGF2] Length = 643 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 121/627 (19%), Positives = 226/627 (36%), Gaps = 85/627 (13%) Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQAC 66 +A + D+ N +R + L +F EL + Y +DL+++ + C Sbjct: 9 VACITPAVQIADVETNRKTMQRLLHTLRPD-IRLAVFPELSLCAYTCQDLLYQNLLLDDC 67 Query: 67 SSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHEK 126 +A+ L+ + ++ A + VG P + + N L +I+ + K +PNY+EF+EK Sbjct: 68 LAALKALRDE-NESEAILAVGLPLRQGNHLFNCAAFLYKHDILGIVPKTYVPNYNEFYEK 126 Query: 127 RTFISGYS-----------NDPIV--------FRDIRLGILICEDIWKNSNICKHLKKQG 167 R F + P + +CED+W G Sbjct: 127 RWFSDSEQRMLDTISLFGKSVPFTPNLLIHDETSGAVIAAEVCEDLWVPIPPSTRHAGHG 186 Query: 168 AEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCFDG 225 A + +L+AS K + R I+T + +Y + + +L+F G D Sbjct: 187 ANVIVNLSASNETVGKSEYRKAIITTHSAKNMCGYVYTSAGVSESTSDLVFSGHDIIADN 246 Query: 226 QQQLAFQMKHFSEQNFMTEWHYDQQLSQWNYM---------------------------- 257 ++ E E ++ S+ Sbjct: 247 GTIISESEILEEEHILYGEIDLEKCRSERLKFHTAMQIQDSCTYTEVTIRTAPITQPLQL 306 Query: 258 SDDSASTMYIPLQE------EEADYNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAI 311 D + ++P +E + L ++K N ++IIG+SGG+DS L + Sbjct: 307 MRDISPYPFVPGEEAQRSKRCMQILHMQAAGLAQRLKKINCTQLIIGISGGLDSTLALLV 366 Query: 312 AVDALGK-----ENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIHDLVNHFFSLM 366 A A + + + + +P T+ ++ ++ AL + IHD F + Sbjct: 367 AHMAFERLGLNSKGILAVTMPGFGTTRRTRGNSHKLMAALHTSVKEISIHDACEQHFHDI 426 Query: 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGF 426 ++ I EN Q+R R ILM L+N ++L T + SE+++G+ T GD + Sbjct: 427 GHDPKQL--DITYENTQARERTQILMDLANTYNGIVLGTGDLSELALGWCTYNGDHMSMY 484 Query: 427 NPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRP-------HQTD 479 + KT V L + + +V I S EL P Q Sbjct: 485 GVNASIPKTLVRHLVKTYAQEMRKTEKTDIADV-LDDICATPVSPELLPPKADDEIAQIT 543 Query: 480 QESLPPYPILDDIIKRIVENE-----------ESFINNDQEYNDETVRYVEHLLYGSEYK 528 ++++ Y D + ++ N +F +++ +T+R + ++K Sbjct: 544 EDAIGSYAYHDFFLYHMLRNHYAPAKILKLAVLAFPQEERKVILDTMRIFYRRFFTQQFK 603 Query: 529 RRQAPVGTKITAKSFGR--DRLYPISN 553 R P G K+ + D P Sbjct: 604 RNAMPDGVKVGSICLSPRGDWRMPSDA 630 >gi|27379658|ref|NP_771187.1| NAD synthetase [Bradyrhizobium japonicum USDA 110] gi|27352810|dbj|BAC49812.1| glutamine-dependent NAD(+) synthetase [Bradyrhizobium japonicum USDA 110] Length = 677 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 138/654 (21%), Positives = 237/654 (36%), Gaps = 110/654 (16%) Query: 6 KIAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQA 65 ++A V D + N A + Q + +F EL +SGY EDLV + + A Sbjct: 13 RVAACVTTSHVADPSANAKAILAAANACHEQSAAVAVFPELCLSGYAIEDLVKQDPLLDA 72 Query: 66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQEGVLNSVVILDAGNIIAVRDKINLPNYSEFHE 125 + + + ++VG P + + N V++ GN++ V K LP Y EF+E Sbjct: 73 VERGLAAIVEASDALMTVLIVGAPLRFGHRIYNCAVVIHRGNVLGVVPKSYLPTYREFYE 132 Query: 126 KRTFISGYS--NDPIVFRDI------------------RLGILICEDIWKNSNICKHLKK 165 R F SG + IVF + +G+ ICED+W L Sbjct: 133 GRHFASGAGIAGETIVFGGLHAPFGVDLLFAAEDVPGLTIGVEICEDMWIPVTPASELAL 192 Query: 166 QGAEFLFSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQD--ELIFDGASFCF 223 GA L +L+ SP + + R + + +Y G+ +L +DG + + Sbjct: 193 AGASVLINLSGSP