HHsearch alignment for GI: 254781000 and conserved domain: COG0286

Probab=96.41  E-value=0.011  Score=36.68  Aligned_cols=105  Identities=17%  Similarity=0.266  Sum_probs=66.8

Q ss_pred             HHHHCCCHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHCC------CEEEEECCCHHHHHHHHHHHHHCCCCC
Q ss_conf             13312357787755442011147788338860246423588885068------569984475889999999788608996
Q gi|254781000|r  185 NSFTQPNAGINVHMLEWVLAATKGIQGDLLELYCGNGNFSLVLARHF------DRVLAVEIAKPSVEAARYNIAANHVNN  258 (371)
Q Consensus       185 ~sFfQ~N~~~~~~l~~~v~~~~~~~~~~vlDLycG~G~fsl~La~~~------~~V~gvE~~~~ai~~A~~Na~~N~i~n  258 (371)
T Consensus       166 GEfyTP-~~v~~liv~~l~~--~-~~~~i~DpacGsgg~l~~a~~~~~~~~~~~~~yGqE~~~~t~~l~~mN~~lhgi~~  241 (489)
T COG0286         166 GEFYTP-REVSELIVELLDP--E-PRNSIYDPACGSGGMLLQAAKYLKRHQDEIFIYGQEINDTTYRLAKMNLILHGIEG  241 (489)
T ss_pred             CCCCCH-HHHHHHHHHHCCC--C-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf             860587-9999999997577--6-56523473354037999999999751555049989566889999996116627874


Q ss_pred             -EEEEECCHHHHHHHHHHCCCCCCCCCC--HHCCCCCCEEEECCCCCCHHH
Q ss_conf             -499976899998988623322223210--101478779998697026348
Q gi|254781000|r  259 -VKIVRMSSKEFTQAMRREREFNRLKDI--DIHSYRFKTIFVDPPRSGLDD  306 (371)
Q Consensus       259 -~~f~~~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~d~vilDPPR~G~~~  306 (371)
T Consensus       242 ~~~i~~~dtl~-------------~~~~~~~~~~~~~D~viaNPPf~~~~w  279 (489)
T COG0286         242 DANIRHGDTLS-------------NPKHDDKDDKGKFDFVIANPPFSGKGW  279 (489)
T ss_pred             CCCCCCCCCCC-------------CCCCCCCCCCCCEEEEECCCCCCCCCC
T ss_conf             22343344236-------------873323466555016865799554443