HHsearch alignment for GI: 254781000 and conserved domain: COG1867

Probab=97.96  E-value=3.1e-05  Score=53.41  Aligned_cols=115  Identities=16%  Similarity=0.229  Sum_probs=80.2

Q ss_pred             CCCHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHCCC--EEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCH
Q ss_conf             23577877554420111477883388602464235888850685--6998447588999999978860899649997689
Q gi|254781000|r  189 QPNAGINVHMLEWVLAATKGIQGDLLELYCGNGNFSLVLARHFD--RVLAVEIAKPSVEAARYNIAANHVNNVKIVRMSS  266 (371)
Q Consensus       189 Q~N~~~~~~l~~~v~~~~~~~~~~vlDLycG~G~fsl~La~~~~--~V~gvE~~~~ai~~A~~Na~~N~i~n~~f~~~~a  266 (371)
T Consensus        35 ~~NRDlsV~~l~~~~~---~~~~~v~DalsatGiRgIRya~E~~~~~v~lNDisp~Avelik~Nv~~N~~~~~~v~n~DA  111 (380)
T COG1867          35 EFNRDLSVLVLKAFGK---LLPKRVLDALSATGIRGIRYAVETGVVKVVLNDISPKAVELIKENVRLNSGEDAEVINKDA  111 (380)
T ss_pred             HHCCCHHHHHHHHHHC---CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCHH
T ss_conf             6364266899998603---4773886435553366754534257617997158989999999999834766632553428


Q ss_pred             HHHHHHHHHCCCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHHH-HHHCCC--CEEEEEC
Q ss_conf             99989886233222232101014787799986970263489999-985399--4899929
Q gi|254781000|r  267 KEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPPRSGLDDATVG-MVQAYP--HILYISC  323 (371)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~G~~~~~~~-~~~~~~--~ivYVSC  323 (371)
T Consensus       112 N~lm~~~~---------------~~fd~IDiDPFGS--PaPFlDaA~~s~~~~G~l~vTA  154 (380)
T COG1867         112 NALLHELH---------------RAFDVIDIDPFGS--PAPFLDAALRSVRRGGLLCVTA  154 (380)
T ss_pred             HHHHHHCC---------------CCCCEEECCCCCC--CCHHHHHHHHHHHCCCEEEEEE
T ss_conf             99987258---------------8763781389999--7267999999722298899985