HHsearch alignment for GI: 254781000 and conserved domain: COG2384

Probab=93.56  E-value=0.34  Score=27.07  Aligned_cols=121  Identities=14%  Similarity=0.236  Sum_probs=76.5

Q ss_pred             HHEEECCCCCCCEEEEECCCCCHHHHHHHH--CCCEEEEECCCHHHHHHHHHHHHHCCCCC-EEEEECCHHHHHHHHHHC
Q ss_conf             420111477883388602464235888850--68569984475889999999788608996-499976899998988623
Q gi|254781000|r  200 EWVLAATKGIQGDLLELYCGNGNFSLVLAR--HFDRVLAVEIAKPSVEAARYNIAANHVNN-VKIVRMSSKEFTQAMRRE  276 (371)
Q Consensus       200 ~~v~~~~~~~~~~vlDLycG~G~fsl~La~--~~~~V~gvE~~~~ai~~A~~Na~~N~i~n-~~f~~~~a~~~~~~~~~~  276 (371)
T Consensus         8 ~~va~~V~~-~~~iaDIGsDHAYLp~~Lv~~~~~~~~va~eV~~gpl~~a~~~v~~~~l~~~i~vr~~dg---l~~l~~~   83 (226)
T COG2384           8 TTVANLVKQ-GARIADIGSDHAYLPIYLVKNNPASTAVAGEVVPGPLESAIRNVKKNNLSERIDVRLGDG---LAVLELE   83 (226)
T ss_pred             HHHHHHHHC-CCCEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCC---CCCCCCC
T ss_conf             999999875-994553267625768999965983268983106678999999887458852077752687---3125766


Q ss_pred             CCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHHH-HHH----CC---CCEEEEECCHHHHHHHHH-HHC-CCCEEEEE
Q ss_conf             3222232101014787799986970263489999-985----39---948999299899988699-842-69679999
Q gi|254781000|r  277 REFNRLKDIDIHSYRFKTIFVDPPRSGLDDATVG-MVQ----AY---PHILYISCNPDSLCRDLS-ILS-TTHTIERL  344 (371)
Q Consensus       277 ~~~~~~~~~~~~~~~~d~vilDPPR~G~~~~~~~-~~~----~~---~~ivYVSCnp~TlarD~~-~l~-~gy~i~~~  344 (371)
T Consensus        84 -------------d~~d~ivI----AGMGG~lI~~ILee~~~~l~~~~rlIL---QPn~~~~~LR~~L~~~~~~I~~E  141 (226)
T COG2384          84 -------------DEIDVIVI----AGMGGTLIREILEEGKEKLKGVERLIL---QPNIHTYELREWLSANSYEIKAE  141 (226)
T ss_pred             -------------CCCCEEEE----ECCCHHHHHHHHHHHHHHHCCCCEEEE---CCCCCHHHHHHHHHHCCCEEEEE
T ss_conf             -------------77687999----578678999999986655057410787---88878899999999679514431