HHsearch alignment for GI: 254781000 and conserved domain: KOG0820

Probab=95.83  E-value=0.072  Score=31.41  Aligned_cols=99  Identities=18%  Similarity=0.150  Sum_probs=66.7

Q ss_pred             CCHHHHHHHHHHEEECCCCCCC-EEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCC--C-EEEEECC
Q ss_conf             3577877554420111477883-3886024642358888506856998447588999999978860899--6-4999768
Q gi|254781000|r  190 PNAGINVHMLEWVLAATKGIQG-DLLELYCGNGNFSLVLARHFDRVLAVEIAKPSVEAARYNIAANHVN--N-VKIVRMS  265 (371)
Q Consensus       190 ~N~~~~~~l~~~v~~~~~~~~~-~vlDLycG~G~fsl~La~~~~~V~gvE~~~~ai~~A~~Na~~N~i~--n-~~f~~~~  265 (371)
T Consensus        42 kNp~v~~~I~~k----a~~k~tD~VLEvGPGTGnLT~~lLe~~kkVvA~E~Dprmvael~k--rv~gtp~~~kLqV~~gD  115 (315)
T KOG0820          42 KNPLVIDQIVEK----ADLKPTDVVLEVGPGTGNLTVKLLEAGKKVVAVEIDPRMVAELEK--RVQGTPKSGKLQVLHGD  115 (315)
T ss_pred             CCHHHHHHHHHC----CCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHH--HHCCCCCCCEEEEEECC
T ss_conf             477889999860----478998779995798778999999720848999408078999999--86699865604688503


Q ss_pred             HHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHH
Q ss_conf             99998988623322223210101478779998697026348999998
Q gi|254781000|r  266 SKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPPRSGLDDATVGMV  312 (371)
Q Consensus       266 a~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~G~~~~~~~~~  312 (371)
T Consensus       116 ~lK----------------~d--~P~fd~cVsNlPyqISSp~vfKLL  144 (315)
T KOG0820         116 FLK----------------TD--LPRFDGCVSNLPYQISSPLVFKLL  144 (315)
T ss_pred             CCC----------------CC--CCCCCEEECCCCCCCCCHHHHHHC
T ss_conf             125----------------78--851031122698533678899862