HHsearch alignment for GI: 254781000 and conserved domain: KOG1271

Probab=97.72  E-value=0.00025  Score=47.51  Aligned_cols=165  Identities=16%  Similarity=0.226  Sum_probs=91.1

Q ss_pred             HHHHHHHHHEEECCC----CCCC-EEEEECCCCCHHHHHHHH-CCCE-EEEECCCHHHHHHHHHHHHHCCCCC-EEEEEC
Q ss_conf             787755442011147----7883-388602464235888850-6856-9984475889999999788608996-499976
Q gi|254781000|r  193 GINVHMLEWVLAATK----GIQG-DLLELYCGNGNFSLVLAR-HFDR-VLAVEIAKPSVEAARYNIAANHVNN-VKIVRM  264 (371)
Q Consensus       193 ~~~~~l~~~v~~~~~----~~~~-~vlDLycG~G~fsl~La~-~~~~-V~gvE~~~~ai~~A~~Na~~N~i~n-~~f~~~  264 (371)
T Consensus        46 ~ae~riv~wl~d~~~~~rv~~~A~~VlDLGtGNG~~L~~L~~egf~~~L~GvDYs~~AV~LA~niAe~~~~~n~I~f~q~  125 (227)
T KOG1271          46 DAEERIVDWLKDLIVISRVSKQADRVLDLGTGNGHLLFQLAKEGFQSKLTGVDYSEKAVELAQNIAERDGFSNEIRFQQL  125 (227)
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             38999999998654441102243211661579618899988713888864531578899999878875278853168873


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEECCCCC----CHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHCC-C
Q ss_conf             89999898862332222321010147877999869702----63489999985399-489992998999886998426-9
Q gi|254781000|r  265 SSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPPRS----GLDDATVGMVQAYP-HILYISCNPDSLCRDLSILST-T  338 (371)
Q Consensus       265 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~----G~~~~~~~~~~~~~-~ivYVSCnp~TlarD~~~l~~-g  338 (371)
T Consensus       126 DI~~--~~~~~-~qfd----lvlDKGT~DAisLs~d~~~~r~~~Y~d~v~~ll~~~gifvItSCN~T~-dELv~~f~~~~  197 (227)
T KOG1271         126 DITD--PDFLS-GQFD----LVLDKGTLDAISLSPDGPVGRLVVYLDSVEKLLSPGGIFVITSCNFTK-DELVEEFENFN  197 (227)
T ss_pred             ECCC--CCCCC-CCEE----EEEECCCEEEEECCCCCCCCCEEEEHHHHHHCCCCCCEEEEEECCCCH-HHHHHHHHCCC
T ss_conf             2257--75555-4323----896057412255077776654344355686303889679998557658-99999972597


Q ss_pred             CEEEEEEEEE--CCCCC-CCEEEEEEEEEC
Q ss_conf             6799999971--79898-724899999985
Q gi|254781000|r  339 HTIERLALFD--QFPYT-RHMECGVLLVRK  365 (371)
Q Consensus       339 y~i~~~~~~D--~FP~T-~HvE~v~~l~R~  365 (371)
T Consensus       198 f~~~~tvp~ptF~FgG~~G~tvt~vaF~~k  227 (227)
T KOG1271         198 FEYLSTVPTPTFMFGGSVGSTVTSVAFLRK  227 (227)
T ss_pred             EEEEEEECCCEEEECCCCCCEEEEEEEECC
T ss_conf             499996055258865621547889999629