HHsearch alignment for GI: 254781000 and conserved domain: PRK12335

Probab=97.40  E-value=0.00029  Score=47.03  Aligned_cols=82  Identities=22%  Similarity=0.246  Sum_probs=60.3

Q ss_pred             EEEEEECCHHHHC-------CCHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHH
Q ss_conf             2799976413312-------357787755442011147788338860246423588885068569984475889999999
Q gi|254781000|r  177 TLIYRQIENSFTQ-------PNAGINVHMLEWVLAATKGIQGDLLELYCGNGNFSLVLARHFDRVLAVEIAKPSVEAARY  249 (371)
Q Consensus       177 ~~~f~i~p~sFfQ-------~N~~~~~~l~~~v~~~~~~~~~~vlDLycG~G~fsl~La~~~~~V~gvE~~~~ai~~A~~  249 (371)
T Consensus        90 ~L~FyC~pedYf~KKY~lt~tHSev~~a-----~~~i--~pgkaLDLGCG~GRNsLyLa~~GfdVTA~D~N~~sl~~L~~  162 (289)
T PRK12335         90 QLSFYCKPEDYFHKKYNLTPTHSEVLEA-----AKTV--KPGKALDLGCGQGRNSLYLALLGFDVTAVDINQASLENLQQ  162 (289)
T ss_pred             EEEEECCHHHHHHHHCCCCCCCHHHHHH-----HHHC--CCCCEEEECCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHH
T ss_conf             7888617888778633899861999998-----7526--88746660478882278897579842588689999999999


Q ss_pred             HHHHCCCCCEEEEECCH
Q ss_conf             78860899649997689
Q gi|254781000|r  250 NIAANHVNNVKIVRMSS  266 (371)
Q Consensus       250 Na~~N~i~n~~f~~~~a  266 (371)
T Consensus       163 ia~~E~L-~i~~~~yDI  178 (289)
T PRK12335        163 IAEKENL-NIRAGSYDI  178 (289)
T ss_pred             HHHHCCC-CCCCEEECC
T ss_conf             9997198-877257516