HHsearch alignment for GI: 254781000 and conserved domain: cd00550
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=92.32 E-value=0.85 Score=24.43 Aligned_cols=63 Identities=11% Similarity=0.286 Sum_probs=34.2
Q ss_pred CCCCEEEEC-CCCCCHHHHH----------HHHHHCCC--CEEEEECCHHHHH-HH----HHHHCC-CCEEEEEEEEECC
Q ss_conf 787799986-9702634899----------99985399--4899929989998-86----998426-9679999997179
Q gi|254781000|r 290 YRFKTIFVD-PPRSGLDDAT----------VGMVQAYP--HILYISCNPDSLC-RD----LSILST-THTIERLALFDQF 350 (371)
Q Consensus 290 ~~~d~vilD-PPR~G~~~~~----------~~~~~~~~--~ivYVSCnp~Tla-rD----~~~l~~-gy~i~~~~~~D~F 350 (371)
T Consensus 123 ~~yD~IViDtaP-TGhtLrlL~lP~~l~~~~~~L~d~~~t~~~lV-~~PE~~~v~Et~R~~~~L~~~~i~v~~vvvN~v~ 200 (254)
T cd00550 123 AEYDVVVFDTAP-TGHTLRLLSLPTVLSWAREILSDPERTSFRLV-CIPEKMSLYETERAIQELAKYGIDVDAVIVNQLL 200 (254)
T ss_pred CCCCEEEECCCC-CHHHHHHHHCHHHHHHHHHHCCCCCCEEEEEE-ECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 699889988998-56799875156999999985379565589999-7787216999999999999779998979995880
Q ss_pred CCCC
Q ss_conf 8987
Q gi|254781000|r 351 PYTR 354 (371)
Q Consensus 351 P~T~ 354 (371)
T Consensus 201 p~~~ 204 (254)
T cd00550 201 PEDV 204 (254)
T ss_pred CCCC
T ss_conf 8776