HHsearch alignment for GI: 254781000 and conserved domain: pfam03291
>pfam03291 Pox_MCEL mRNA capping enzyme. This family of enzymes are related to pfam03919.
Probab=94.73 E-value=0.091 Score=30.78 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHEEECCC--CCCCEEEEECCCCCH-HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCC----------CC
Q ss_conf 57787755442011147--788338860246423-588885068569984475889999999788608----------99
Q gi|254781000|r 191 NAGINVHMLEWVLAATK--GIQGDLLELYCGNGN-FSLVLARHFDRVLAVEIAKPSVEAARYNIAANH----------VN 257 (371)
Q Consensus 191 N~~~~~~l~~~v~~~~~--~~~~~vlDLycG~G~-fsl~La~~~~~V~gvE~~~~ai~~A~~Na~~N~----------i~ 257 (371)
T Consensus 43 NNwVKs~LI~~~~~~~~~~~~~~~VLDl~CGkGGDL~Kw~~~~i~~~vgiDis~~sI~~A~~RY~~~~~~~~~~~~~~~f 122 (327)
T pfam03291 43 NNWIKSLLISLYASKTFQDKPKRKVLDLDCGKGGDLEKYFKGGISGLIGTDIAEVSIEQAQERYNDLNSRSKSKYYKFDF 122 (327)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 18999999999988751468898799836866445788974798689996689999999999999864211444456675
Q ss_pred CEEEEECCHH
Q ss_conf 6499976899
Q gi|254781000|r 258 NVKIVRMSSK 267 (371)
Q Consensus 258 n~~f~~~~a~ 267 (371)
T Consensus 123 ~~~f~~~D~~ 132 (327)
T pfam03291 123 IAEFITGDCF 132 (327)
T ss_pred CEEEEECCCC
T ss_conf 0012315621