HHsearch alignment for GI: 254781000 and conserved domain: pfam04378

>pfam04378 DUF519 Protein of unknown function (DUF519). Bacterial family of unknown function, possibly secreted.
Probab=94.97  E-value=0.29  Score=27.49  Aligned_cols=99  Identities=21%  Similarity=0.297  Sum_probs=71.6

Q ss_pred             EEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHCCCCC
Q ss_conf             88602464235888850685699844758899999997886089964999768999989886233222232101014787
Q gi|254781000|r  213 LLELYCGNGNFSLVLARHFDRVLAVEIAKPSVEAARYNIAANHVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRF  292 (371)
Q Consensus       213 vlDLycG~G~fsl~La~~~~~V~gvE~~~~ai~~A~~Na~~N~i~n~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (371)
T Consensus        61 ~l~~YPGSP~ia~~llR~qDrl~l~ELHp~d~~~L~~~~~~--~~~v~v~~~DG~~~l~a~lPP~~------------rR  126 (245)
T pfam04378        61 KLRYYPGSPLLARQLLRAQDRLVLCELHPSDYPLLKAEFAG--DRRVRVHQADGFAALKAFLPPKE------------RR  126 (245)
T ss_pred             CCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCC--CCCCEEEECCHHHHHHHHCCCCC------------CC
T ss_conf             96888998999998489667689885597999999987455--87657993658999996689977------------86


Q ss_pred             CEEEECCCCCCHHH--HHHH----HHHCCCCEEEEECCH
Q ss_conf             79998697026348--9999----985399489992998
Q gi|254781000|r  293 KTIFVDPPRSGLDD--ATVG----MVQAYPHILYISCNP  325 (371)
Q Consensus       293 d~vilDPPR~G~~~--~~~~----~~~~~~~ivYVSCnp  325 (371)
T Consensus       127 glVLIDPpYE~k~ey~~v~~~l~~a~~r~~~g~y~iWYP  165 (245)
T pfam04378       127 GLVLIDPPFELKDEYQRVVAALREAYKRWPTGIYAIWYP  165 (245)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             799967986665699999999999998578837999965