HHsearch alignment for GI: 254781000 and conserved domain: pfam06325
>pfam06325 PrmA Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.
Probab=98.88 E-value=1.2e-07 Score=69.03 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=90.6
Q ss_pred EEEEEECCHHHHCC-CHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHH-CCCEEEEECCCHHHHHHHHHHHHHC
Q ss_conf 27999764133123-577877554420111477883388602464235888850-6856998447588999999978860
Q gi|254781000|r 177 TLIYRQIENSFTQP-NAGINVHMLEWVLAATKGIQGDLLELYCGNGNFSLVLAR-HFDRVLAVEIAKPSVEAARYNIAAN 254 (371)
Q Consensus 177 ~~~f~i~p~sFfQ~-N~~~~~~l~~~v~~~~~~~~~~vlDLycG~G~fsl~La~-~~~~V~gvE~~~~ai~~A~~Na~~N 254 (371)
T Consensus 128 ~~~I~idPGmAFGTG~H~TT~lcl~~l~~~~-~~~~~vlD~GcGSGILaIaA~klGa~~v~a~DiDp~Av~~a~eN~~~N 206 (294)
T pfam06325 128 AVNIELDPGMAFGTGTHPTTALCLEALESLV-KPGETVLDVGCGSGILAIAALKLGAKKVVGVDIDPVAVRAAKENAELN 206 (294)
T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHC-CCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHC
T ss_conf 3589866643456777757999999998650-369867850565089999999759996899988899999999999976
Q ss_pred CCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEECC---CCCCHHHHHHHHHHCCCCEEEEECCHHHHHHH
Q ss_conf 899649997689999898862332222321010147877999869---70263489999985399489992998999886
Q gi|254781000|r 255 HVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDP---PRSGLDDATVGMVQAYPHILYISCNPDSLCRD 331 (371)
Q Consensus 255 ~i~n~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDP---PR~G~~~~~~~~~~~~~~ivYVSCnp~TlarD 331 (371)
T Consensus 207 ~v~~~-~~~~~~~------------------~~~~~~~DlIvANIla~~L~~l~~~~~~~-l~~~G~lilSGil~~q~~~ 266 (294)
T pfam06325 207 GVEAQ-LEVYLPG------------------DLPEGKADVVVANILADPLIELAPDIYAL-VKPGGYLILSGILEEQADD 266 (294)
T ss_pred CCCCC-EEEECCC------------------CCCCCCCCEEEEHHCHHHHHHHHHHHHHH-HCCCCEEEECCCCHHHHHH
T ss_conf 99831-7996443------------------15566457898410899999999999997-3899899991782899999
Q ss_pred HH-HHCCCCEEEEEEE
Q ss_conf 99-8426967999999
Q gi|254781000|r 332 LS-ILSTTHTIERLAL 346 (371)
Q Consensus 332 ~~-~l~~gy~i~~~~~ 346 (371)
T Consensus 267 v~~a~~~g~~~~~~~~ 282 (294)
T pfam06325 267 VAEAYSQGFELITVEE 282 (294)
T ss_pred HHHHHHCCCEEEEEEE
T ss_conf 9999986997743774