HHsearch alignment for GI: 254781000 and conserved domain: pfam07021
>pfam07021 MetW Methionine biosynthesis protein MetW. This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in gram-positive bacteria and certain fungi, the second and third steps are a direct sulfhydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells.
Probab=98.06 E-value=6.2e-06 Score=57.95 Aligned_cols=76 Identities=12% Similarity=0.246 Sum_probs=54.7
Q ss_pred HHEEECCCCCCCEEEEECCCCCHHHHHHHH-CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCC
Q ss_conf 420111477883388602464235888850-6856998447588999999978860899649997689999898862332
Q gi|254781000|r 200 EWVLAATKGIQGDLLELYCGNGNFSLVLAR-HFDRVLAVEIAKPSVEAARYNIAANHVNNVKIVRMSSKEFTQAMRRERE 278 (371)
Q Consensus 200 ~~v~~~~~~~~~~vlDLycG~G~fsl~La~-~~~~V~gvE~~~~ai~~A~~Na~~N~i~n~~f~~~~a~~~~~~~~~~~~ 278 (371)
T Consensus 5 ~iI~~~I~~-~srVLDlGCG~G~ll~~L~~~k~v~~~GvEid~~~v~~a~~k----g---~~Vi~~D~d~~l~~f~---- 72 (193)
T pfam07021 5 RYIARLIPP-GSRVLDLGCGDGSLLYLLQEEKQVDGRGIELDAAGVAECVAK----G---LSVIQGDADKGLEHFP---- 72 (193)
T ss_pred HHHHHHCCC-CCEEEEECCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHC----C---CCEECCCHHHCHHHCC----
T ss_conf 999986589-698998368898999999876698769833899999999864----7---9545077445974577----
Q ss_pred CCCCCCCHHCCCCCCEEEE
Q ss_conf 2223210101478779998
Q gi|254781000|r 279 FNRLKDIDIHSYRFKTIFV 297 (371)
Q Consensus 279 ~~~~~~~~~~~~~~d~vil 297 (371)
T Consensus 73 ----------d~sFD~VIl 81 (193)
T pfam07021 73 ----------DKSFDYVIL 81 (193)
T ss_pred ----------CCCCCEEEH
T ss_conf ----------678037869