BLAST/PSIBLAST alignment of GI: 254781000 and GI: 85060132 at iteration 1

>gi|85060132|ref|YP_455834.1| tRNA (uracil-5-)-methyltransferase [Sodalis glossinidius str. 'morsitans'] Length = 370
>gi|123518780|sp|Q2NQZ6|TRMA_SODGM RecName: Full=tRNA (uracil-5-)-methyltransferase; AltName: Full=tRNA(M-5-U54)-methyltransferase; Short=RUMT Length = 370
>gi|84780652|dbj|BAE75429.1| tRNA (uracil-5)-methyltransferase [Sodalis glossinidius str. 'morsitans'] Length = 370

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 305/365 (83%), Positives = 325/365 (89%)

Query: 4   TLLIDQYEQQLAEKVDRLRQMMLAFQVPNLQIFRSEPIHYRMRAEFHIWHDGDDLYHIMF 63
           TL IDQYEQQLAEK  RLRQMMLAFQ P  QIFRS+P HYRMRAEF IWHD DDLYHIMF
Sbjct: 5   TLPIDQYEQQLAEKAARLRQMMLAFQAPEAQIFRSQPAHYRMRAEFRIWHDEDDLYHIMF 64

Query: 64  DQQTKERMRIDYFMPGSLLINALMIEMMATIRLEPLLRAKLFQIDYLTSQSDQAIVTLIY 123
           D QTK R+RID+FMPGS LINALM EMM  IR EPLLRAKLFQIDYLT+QS +A+VTLIY
Sbjct: 65  DPQTKARIRIDHFMPGSPLINALMAEMMTAIRPEPLLRAKLFQIDYLTTQSGEAVVTLIY 124

Query: 124 HRLLDDAWRECAIRLRDALHARKYQIQLIGRANKTKICLDRDYVDERLTVAGRTLIYRQI 183
           HR LDDAWRECA  LRDAL AR Y IQ IGRANKTKI LDRDYVDERLTVAGRTLIY+QI
Sbjct: 125 HRPLDDAWRECAAGLRDALRARGYHIQFIGRANKTKIYLDRDYVDERLTVAGRTLIYQQI 184

Query: 184 ENSFTQPNAGINVHMLEWVLAATKGIQGDLLELYCGNGNFSLVLARHFDRVLAVEIAKPS 243
           ENSFTQPNAGINVHMLEW LAAT+G QGDLLELYCGNGNFSL LARHFDRVLA EIAK S
Sbjct: 185 ENSFTQPNAGINVHMLEWALAATEGAQGDLLELYCGNGNFSLALARHFDRVLATEIAKLS 244

Query: 244 VEAARYNIAANHVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPPRSG 303
           VEAA YNIAANH++NV+IVRMS++EFTQAMR+EREF RLK+ID+ SYR +TIFVDPPRSG
Sbjct: 245 VEAAHYNIAANHIDNVQIVRMSAEEFTQAMRKEREFTRLKEIDLQSYRCETIFVDPPRSG 304

Query: 304 LDDATVGMVQAYPHILYISCNPDSLCRDLSILSTTHTIERLALFDQFPYTRHMECGVLLV 363
           LD+ATV MVQAYP ILYISCNPDSLCR+LS LSTTHTIERLALFDQFPYT HMECGVLLV
Sbjct: 305 LDEATVSMVQAYPQILYISCNPDSLCRNLSTLSTTHTIERLALFDQFPYTHHMECGVLLV 364

Query: 364 RKPSG 368
           RK + 
Sbjct: 365 RKATA 369