PSIBLAST alignment of GI: 254781000 and protein with PDB id: 2cww

gi|82408293|pdb|2CWW|A Chain A, Crystal Structure Of Thermus Thermophilus Ttha1280, A Putative Sam-Dependent Rna Methyltransferase, In Complex With S-Adenosyl-L-Homocysteine Length = 382
>gi|82408294|pdb|2CWW|B Chain B, Crystal Structure Of Thermus Thermophilus Ttha1280, A Putative Sam-Dependent Rna Methyltransferase, In Complex With S-Adenosyl-L-Homocysteine Length = 382

 Score = 60.4 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 93/269 (34%), Gaps = 32/269 (11%)

Query: 49  FHIWHDGDDLYHIMFDQQTKERMRIDYFMPGSLLINALMIEMMATIRLEPLLRAKLFQID 108
           + ++     L   +++  T   +R   F P    + AL+  +   +     +  +  +  
Sbjct: 35  YPVYWGRRFLALALYNPHTDLAVRAYRFAPAEDPVAALLENLAQALARREAVLRQDPEGG 94

Query: 109 YL-TSQSDQAIVTLIYH--------RLLDDAWRECAIRLRDALHARKYQIQLIGRANKTK 159
           Y         +  L+          +    AW     ++ +AL      + L     +T+
Sbjct: 95  YRLVHAEGDLLPGLVVDYYAGHAVVQATAHAWEGLLPQVAEALRPHVQSV-LAKNDARTR 153

Query: 160 ICLDRD--------YVDERLTVAGRTLIYRQIENSFTQPNAGINVHMLEWVLAATKGIQG 211
                          V ER+ V    + Y     +  +  A ++       L   +    
Sbjct: 154 ELEGLPLYVRPLLGEVPERVQVQEGRVRYLVDLRAGQKTGAYLDQRENR--LYMERFRGE 211

Query: 212 DLLELYCGNGNFSLVLARHFDRVLAVEIAKPSVEAARYNIAANHVNNVKIVRMSSKEFTQ 271
             L+++   G F+L LA  F  V+AV+ +  ++  A  N   N + NV+++  ++ +  +
Sbjct: 212 RALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLR 271

Query: 272 AMRREREFNRLKDIDIHSYRFKTIFVDPP 300
            + +               RF  + +DPP
Sbjct: 272 RLEK------------EGERFDLVVLDPP 288