RPSBLAST alignment for GI: 254781000 and conserved domain: COG2265

>gnl|CDD|32446 COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]. Length = 432

 Score =  269 bits (689), Expect = 9e-73
 Identities = 112/363 (30%), Positives = 167/363 (46%), Gaps = 27/363 (7%)

Query: 9   QYEQQLAEKVDRLRQMM----LAFQVPNLQIFRSEPIHYRMRAEFHIWHDGDD-LYHIMF 63
            YE QL  K ++L++++     +    +  +  S P  YR RA F +   G   L    F
Sbjct: 84  SYEAQLEFKREQLKELLKRIGGSEVEIDPTVGMSPPWGYRNRARFSVRGSGKGQLLAGFF 143

Query: 64  DQQTKERMRID---YFMPGSLLINALMIEMMATIRLEPLLRAKLFQIDYLTSQSDQAIVT 120
            Q + E + ID    F P S  I  L+ E++A + L P    K   I  L    +   V 
Sbjct: 144 RQGSHEIVDIDECPVFPPRSNEILPLLRELLAKLGLPPYNEKKKKGILRLIVLREGQEVM 203

Query: 121 LIYHRLLDDAWRECAIRLRDALHARKYQIQLIGRANKTKICLDRDYVDERLTVAGRTLIY 180
           +           +    L +A    K  +Q I RA    I  D +     L  + R  + 
Sbjct: 204 VRLVTKHLPELEQALRELLEAFPEIKGIVQNINRAKTNVIEGDEEITLYGLE-SIREGVS 262

Query: 181 RQIEN-SFTQPNAGINVHMLEWVLAATKGIQGD-LLELYCGNGNFSLVLARHFDRVLAVE 238
            QI   SF Q N  +   + E  L   +   G+ +L+LYCG G F L LA+   +V  VE
Sbjct: 263 FQISPRSFFQVNPAVAEKLYETALEWLELAGGERVLDLYCGVGTFGLPLAKRVKKVHGVE 322

Query: 239 IAKPSVEAARYNIAANHVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVD 298
           I+  +VEAA+ N AAN ++NV+ +   ++EFT A                 Y+   + VD
Sbjct: 323 ISPEAVEAAQENAAANGIDNVEFIAGDAEEFTPAW-------------WEGYKPDVVVVD 369

Query: 299 PPRSGLDDATVGMVQAY--PHILYISCNPDSLCRDLSILSTTH-TIERLALFDQFPYTRH 355
           PPR+G D   +  +       I+Y+SCNP +L RDL+IL++T   IER+  FD FP+T H
Sbjct: 370 PPRAGADREVLKQLAKLKPKRIVYVSCNPATLARDLAILASTGYEIERVQPFDMFPHTHH 429

Query: 356 MEC 358
           +E 
Sbjct: 430 VEA 432