HHsearch alignment for GI: 254781003 and conserved domain: PRK05421

>PRK05421 hypothetical protein; Provisional.
Probab=99.85  E-value=5.6e-20  Score=127.21  Aligned_cols=220  Identities=20%  Similarity=0.175  Sum_probs=115.6

Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf             78826999983014788667666776531018899999999986089889999507857999860333430786214556
Q gi|254781003|r   20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI   99 (304)
Q Consensus        20 ~~~~lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~~~~~~~~~~~~~~~~~~~~~~~~   99 (304)
T Consensus        30 ~~~~~~llvWNI~Kq-----------~~~~W~~~L~~l~~-----~~dLvlLQEA~~~~~l~~~~~~~~~~~~~a~----   89 (254)
T PRK05421         30 GSERFRLLVWNIYKQ-----------QRAGWLSVLKNLGK-----DADLVLLQEAQTTPELVQFATANYLAADQAP----   89 (254)
T ss_pred             CCCCEEEEEEEEECC-----------CCHHHHHHHHHHCC-----CCCEEEEEECCCCHHHHHHHHCCCCHHHHHH----
T ss_conf             876406999994216-----------65307999998606-----6878999613677657998852551788612----


Q ss_pred             CCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEE-ECCEEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf             7543223446315899825852676530122467655555565336999998-299499999940678887752000025
Q gi|254781003|r  100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVE-INGKKIWVLDIHLKSFCFLDSLENTYS  178 (304)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~v~n~Hl~~~~~~~~~~~~~~  178 (304)
T Consensus        90 ----af~~~~~~~GVmtlS~~~p~~~c~~~~----~EP~lr~pKs~Lit~YpL~~~q~LlVVNiHaINF~~g~-------  154 (254)
T PRK05421         90 ----AFVLPQHPSGVMTLSKAHPVYCCPLRE----REPWLRLPKSALITEYPLPNGQTLLVVNIHAINFSVGV-------  154 (254)
T ss_pred             ----HHHCCCCCCEEEECCCCCHHHHCCCCC----CCCCCCCCHHHHEEEECCCCCCEEEEEEEEEEEEECCH-------
T ss_conf             ----220479863478754111254423566----67220363123047720589977999994067665156-------


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             77899999999999998630368980999802688877662046898752255753111445678765646688820147
Q gi|254781003|r  179 PSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNLRNKIPID  258 (304)
Q Consensus       179 ~~~~~~~~q~~~l~~~~~~~~~~~~~vIi~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD  258 (304)
T Consensus       155 ---~~y~~QL~~l~~~i~---~H~GPvI~AGDFNt---Ws~~R~~~l~~~~~~~gL~ev~f~--~d--~R~~-~~g~pLD  220 (254)
T PRK05421        155 ---DVYSKQLEPIGDQIA---HHSGPIILAGDFNT---WSRKRMNALKRFARELGLKEVRFT--DD--QRRK-AFGRPLD  220 (254)
T ss_pred             ---HHHHHHHHHHHHHHH---HCCCCEEEECCCCC---CCHHHHHHHHHHHHHCCCCEEECC--CC--CCEE-CCCCCCC
T ss_conf             ---999999999999998---48998798445330---139999999999997698087537--67--7345-2589865


Q ss_pred             EEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             999862043100247217864113455444555576343899984
Q gi|254781003|r  259 YFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD  303 (304)
Q Consensus       259 ~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~l~  303 (304)
T Consensus       221 hifyRgl~----------~~~a~---~~--~t~~SDHnPl~~~f~  250 (254)
T PRK05421        221 HVFYRGLN----------VEKAS---VL--VTRASDHNPLLVEFS  250 (254)
T ss_pred             EEEECCCE----------EEEEE---CC--CCCCCCCCCEEEEEE
T ss_conf             69987852----------33105---56--567787773889999