HHsearch results for GI: 254781003 and protein with PDBid: 1hd7_A
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 2isi_A
Probab=99.93 E-value=7e-24 Score=147.35 Aligned_cols=55 Identities=20% Similarity=0.212 Sum_probs=34.8
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC--HHHHHHHHCCCCCEE
Q ss_conf 8269999830147886676667765310188999999999860898899995078--579998603334307
Q gi|254781003|r 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAKVFPKNTWCI 91 (304)
Q Consensus 22 ~~lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~--~~~~~~~~~~~~~~~ 91 (304)
.+|||+||||+++. .. ..+.+.++|++.+||||||||+.. ......+....+|..
T Consensus 60 ~~mki~swNvnGlr--------------~~-~k~~~~~~i~~~~pDIi~LQE~k~~~~~~~~~l~~~~g~~~ 116 (318)
T 1hd7_A 60 ATLKICSWNVDGLR--------------AW-IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSH 116 (318)
T ss_dssp CCEEEEEEECSSHH--------------HH-HHTTHHHHHHHHCCSEEEEECCCCCC-----------CCCE
T ss_pred CCEEEEEEECCCHH--------------HH-HHCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCCE
T ss_conf 87699999838857--------------61-13448999975899589998353780128888895179964