HHsearch results for GI: 254781003 and protein with PDBid: 1hd7_A

>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 2isi_A
Probab=99.93  E-value=7e-24  Score=147.35  Aligned_cols=55  Identities=20%  Similarity=0.212  Sum_probs=34.8

Q ss_pred             CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC--HHHHHHHHCCCCCEE
Q ss_conf             8269999830147886676667765310188999999999860898899995078--579998603334307
Q gi|254781003|r   22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS--YNAVAKVFPKNTWCI   91 (304)
Q Consensus        22 ~~lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~--~~~~~~~~~~~~~~~   91 (304)
                      .+|||+||||+++.              .. ..+.+.++|++.+||||||||+..  ......+....+|..
T Consensus        60 ~~mki~swNvnGlr--------------~~-~k~~~~~~i~~~~pDIi~LQE~k~~~~~~~~~l~~~~g~~~  116 (318)
T 1hd7_A           60 ATLKICSWNVDGLR--------------AW-IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSH  116 (318)
T ss_dssp             CCEEEEEEECSSHH--------------HH-HHTTHHHHHHHHCCSEEEEECCCCCC-----------CCCE
T ss_pred             CCEEEEEEECCCHH--------------HH-HHCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCCE
T ss_conf             87699999838857--------------61-13448999975899589998353780128888895179964