HHsearch results for GI: 254781003 and protein with PDBid: 3g6s_A
>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482}
Probab=99.96 E-value=7.7e-28 Score=168.99 Aligned_cols=246 Identities=18% Similarity=0.082 Sum_probs=115.1
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 82699998301478866766677653101889999999998608988999950785799986033343078621455675
Q gi|254781003|r 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH 101 (304)
Q Consensus 22 ~~lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (304)
++|||+||||++.... +....+..+.+.|+++|++.+|||||||||.... +..+........+........
T Consensus 2 ~~lri~TyNI~~~~~~-------d~~~~~~~R~~~i~~~i~~~~~DIi~LQEv~~~~-~~~l~~~l~~~~~~~~~~~~~- 72 (267)
T 3g6s_A 2 TDVRWATFNIRYDNPQ-------DSLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQ-FQDLRAGLPEYDGIGVGRDDG- 72 (267)
T ss_dssp EEEEEEEEECCCCCGG-------GGGGSGGGTHHHHHHHHHHTTCSEEEEESBCHHH-HHHHHHHCTTEEEECCCTTTS-
T ss_pred CCEEEEEEECCCCCCC-------CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHH-HHHHHHHHCCCCEEEEECCCC-
T ss_conf 9649998957838888-------5536899999999999983799999998576689-899998610065056741466-
Q ss_pred CCCCCCCCCEEEEEEECCCEEE-EEEECCCCC-----CCCCCCCCCCCEEEEEEE--EECCEEEEEEEECCCCCCCCCCC
Q ss_conf 4322344631589982585267-653012246-----765555556533699999--82994999999406788877520
Q gi|254781003|r 102 SKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLG-----AKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL 173 (304)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~r~~~~~~~--~~~~~~~~v~n~Hl~~~~~~~~~ 173 (304)
.......++.++.....+ ......... ..........+......+ ...+....++++|......
T Consensus 73 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 144 (267)
T 3g6s_A 73 ----KTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDKATGKIFMAVNTHFDHVGE---- 144 (267)
T ss_dssp ----SSSSCBCCEEEETTTEEEEEEEEEESSSCTTSTTCCCTTCSSCCEEEEEEEEETTTCCEEEEEEEECCSSCH----
T ss_pred ----CCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCHH----
T ss_conf ----778721489996775635542010146542221211333444304678864205888247897324542101----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCC--CCCCC--CCCCCC
Q ss_conf 00025778999999999999986303689809998026888776620468987522557531114--45678--765646
Q gi|254781003|r 174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDS--RCNANK 249 (304)
Q Consensus 174 ~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~vIi~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~ 249 (304)
..+..|......... ....+.|+|++||||..+....................... ..... ......
T Consensus 145 --------~~~~~~~~~~~~~~~-~~~~~~~~i~~GDfN~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (267)
T 3g6s_A 145 --------EARRQSALLIIRKIK-EIVGERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVDYTFHDFARI 215 (267)
T ss_dssp --------HHHHHHHHHHHHHHH-HHTTTSCEEEEEECSSCTTSHHHHHHHSSSSCCEEHHHHCSEEEECSCSBCTTTTS
T ss_pred --------HHHHHHHHHHHHHHH-HHCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCC
T ss_conf --------678999999998765-30268972132667889766899999853654201233213455567643787766
Q ss_pred CCCCCCCEEEEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 688820147999862043100247217864113455444555576343899984
Q gi|254781003|r 250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 (304)
Q Consensus 250 ~~~~~~~iD~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~l~ 303 (304)
......||||||+|+++... ...+ . .......+|||+||+++|+
T Consensus 216 ~~~~~~riD~I~~s~~l~~~----~~~v-----~-~~~~~~~~SDH~PV~~~~~ 259 (267)
T 3g6s_A 216 PAEDCEKIDFIFVTPQVLVK----SCEI-----P-AEVPEALLSDHNPQLADLE 259 (267)
T ss_dssp CGGGCCCCEEEEECTTSEEE----EEEE-----C-CCCSSSCCCSBCCEEEEEE
T ss_pred CCCCCCCEEEEEECCCEEEE----EEEE-----C-CCCCCCCCCCCCCEEEEEE
T ss_conf 77888417799988994799----9997-----5-7889998785420489999