HHsearch results for GI: 254781003 and protein with PDBid: 3g6s_A

>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482}
Probab=99.96  E-value=7.7e-28  Score=168.99  Aligned_cols=246  Identities=18%  Similarity=0.082  Sum_probs=115.1

Q ss_pred             CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             82699998301478866766677653101889999999998608988999950785799986033343078621455675
Q gi|254781003|r   22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINH  101 (304)
Q Consensus        22 ~~lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (304)
                      ++|||+||||++....       +....+..+.+.|+++|++.+|||||||||.... +..+........+........ 
T Consensus         2 ~~lri~TyNI~~~~~~-------d~~~~~~~R~~~i~~~i~~~~~DIi~LQEv~~~~-~~~l~~~l~~~~~~~~~~~~~-   72 (267)
T 3g6s_A            2 TDVRWATFNIRYDNPQ-------DSLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQ-FQDLRAGLPEYDGIGVGRDDG-   72 (267)
T ss_dssp             EEEEEEEEECCCCCGG-------GGGGSGGGTHHHHHHHHHHTTCSEEEEESBCHHH-HHHHHHHCTTEEEECCCTTTS-
T ss_pred             CCEEEEEEECCCCCCC-------CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHH-HHHHHHHHCCCCEEEEECCCC-
T ss_conf             9649998957838888-------5536899999999999983799999998576689-899998610065056741466-


Q ss_pred             CCCCCCCCCEEEEEEECCCEEE-EEEECCCCC-----CCCCCCCCCCCEEEEEEE--EECCEEEEEEEECCCCCCCCCCC
Q ss_conf             4322344631589982585267-653012246-----765555556533699999--82994999999406788877520
Q gi|254781003|r  102 SKRDSNNDIHTAIAVRKKNVRV-LQQSYPLLG-----AKDSFSRAGNRRAVELLV--EINGKKIWVLDIHLKSFCFLDSL  173 (304)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~r~~~~~~~--~~~~~~~~v~n~Hl~~~~~~~~~  173 (304)
                          .......++.++.....+ .........     ..........+......+  ...+....++++|......    
T Consensus        73 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  144 (267)
T 3g6s_A           73 ----KTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDKATGKIFMAVNTHFDHVGE----  144 (267)
T ss_dssp             ----SSSSCBCCEEEETTTEEEEEEEEEESSSCTTSTTCCCTTCSSCCEEEEEEEEETTTCCEEEEEEEECCSSCH----
T ss_pred             ----CCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCHH----
T ss_conf             ----778721489996775635542010146542221211333444304678864205888247897324542101----


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCC--CCCCC--CCCCCC
Q ss_conf             00025778999999999999986303689809998026888776620468987522557531114--45678--765646
Q gi|254781003|r  174 ENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP--KEKDS--RCNANK  249 (304)
Q Consensus       174 ~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~vIi~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~  249 (304)
                              ..+..|......... ....+.|+|++||||..+.......................  .....  ......
T Consensus       145 --------~~~~~~~~~~~~~~~-~~~~~~~~i~~GDfN~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (267)
T 3g6s_A          145 --------EARRQSALLIIRKIK-EIVGERPAVVTGDFNVTDASDAYETITTNEFVMKDAYKTAARVTGVDYTFHDFARI  215 (267)
T ss_dssp             --------HHHHHHHHHHHHHHH-HHTTTSCEEEEEECSSCTTSHHHHHHHSSSSCCEEHHHHCSEEEECSCSBCTTTTS
T ss_pred             --------HHHHHHHHHHHHHHH-HHCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             --------678999999998765-30268972132667889766899999853654201233213455567643787766


Q ss_pred             CCCCCCCEEEEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             688820147999862043100247217864113455444555576343899984
Q gi|254781003|r  250 NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD  303 (304)
Q Consensus       250 ~~~~~~~iD~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~l~  303 (304)
                      ......||||||+|+++...    ...+     . .......+|||+||+++|+
T Consensus       216 ~~~~~~riD~I~~s~~l~~~----~~~v-----~-~~~~~~~~SDH~PV~~~~~  259 (267)
T 3g6s_A          216 PAEDCEKIDFIFVTPQVLVK----SCEI-----P-AEVPEALLSDHNPQLADLE  259 (267)
T ss_dssp             CGGGCCCCEEEEECTTSEEE----EEEE-----C-CCCSSSCCCSBCCEEEEEE
T ss_pred             CCCCCCCEEEEEECCCEEEE----EEEE-----C-CCCCCCCCCCCCCEEEEEE
T ss_conf             77888417799988994799----9997-----5-7889998785420489999