HHsearch results for GI: 254781003 and protein with PDBid: 3mpr_A
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-31 Score=189.18 Aligned_cols=261 Identities=13% Similarity=0.125 Sum_probs=127.4
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHH--HHHHHCCCCCEEEEEC
Q ss_conf 76788269999830147886676667765310188999999999860898899995078579--9986033343078621
Q gi|254781003|r 18 ASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNA--VAKVFPKNTWCIFYST 95 (304)
Q Consensus 18 ~~~~~~lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~~~~--~~~~~~~~~~~~~~~~ 95 (304)
+.++.+||||||||++++.... ....+++.++++|+++|...+|||||||||..... +.+.+.. +.+....
T Consensus 1 s~~p~~lrV~s~Ni~~~~~~~~-----~~~~~~~~R~~~i~~~i~~~~pDIi~LQEv~~~~~~~l~~~l~~--~~~~~~~ 73 (298)
T 3mpr_A 1 SYQPTSLTVASYNLRNANGSDS-----ARGDGWGQRYPVIAQMVQYHDFDIFGTQECFLHQLKDMKEALPG--YDYIGVG 73 (298)
T ss_dssp CCCCEEEEEEEEECCCCCHHHH-----HHTCCHHHHHHHHHHHHHHTTCSEEEEESBCHHHHHHHHHHSTT--EEEECCC
T ss_pred CCCCCCEEEEEEECCCCCCCCC-----CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC--CCEEEEE
T ss_conf 9799966999897880768886-----54667999999999999857998899993337898999976645--7057640
Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCEEEEEEE-CCCCCCC----CCCCCCCCCEEEEEE--EEECCEEEEEEEECCCCCC
Q ss_conf 45567543223446315899825852676530-1224676----555555653369999--9829949999994067888
Q gi|254781003|r 96 ERLINHSKRDSNNDIHTAIAVRKKNVRVLQQS-YPLLGAK----DSFSRAGNRRAVELL--VEINGKKIWVLDIHLKSFC 168 (304)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~r~~~~~~--~~~~~~~~~v~n~Hl~~~~ 168 (304)
.. . ........++.++.......... +...... ........+...... ....+..+.++++|+.+..
T Consensus 74 ~~-~-----~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 147 (298)
T 3mpr_A 74 RD-D-----GKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGHFKCKDTGFEFLFFNLHMDHIG 147 (298)
T ss_dssp TT-T-----SSSSSCBCCEEEETTTEEEEEEEEEESSSSTTSSCCCTTCSSCCEEEEEEEEETTTCCEEEEEEEECCSSC
T ss_pred CC-C-----CCCCCCEEEEEEECCCCCEECEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCC
T ss_conf 24-7-----87664214899837743210002330242223444444433331047999985378716999842455561
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCC-CCCCCCCC
Q ss_conf 7752000025778999999999999-986303689809998026888776620468987522557531114-45678765
Q gi|254781003|r 169 FLDSLENTYSPSCSLLSQQAQWLKD-WITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFP-KEKDSRCN 246 (304)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~q~~~l~~-~~~~~~~~~~~vIi~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 246 (304)
... . ..+.+.... ........+.|+|+|||||..+.+............. ....... ......++
T Consensus 148 ~~~-----~-------~~~~~~~~~~~~~~~~~~~~~~i~~GDfN~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~t~ 214 (298)
T 3mpr_A 148 KKA-----R-------VESAFLVQEKMKELGRGKNLPAILTGDFNVDQTHQSYDAFVSKGVLC-DSYEKCDYRYALNGTF 214 (298)
T ss_dssp HHH-----H-------HHHHHHHHHHHHHTTTTSCCCEEEEEECSSCTTSHHHHHHHTTSSSE-EHHHHCSEEECSSCSB
T ss_pred HHH-----H-------HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHCCHHH-HHHHHHCCCCCCCCCC
T ss_conf 577-----8-------99988888888653025788789707349898836676554302035-5787616567898875
Q ss_pred C--CCCCCCCCCEEEEEECCCHHHCCC---CCCEEEE------------EECCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 6--466888201479998620431002---4721786------------41134554445555763438999849
Q gi|254781003|r 247 A--NKNLRNKIPIDYFVMDQNAYKFLI---QESFSEI------------LYNEDDIKSRGKRLSDHCPISIDYDF 304 (304)
Q Consensus 247 ~--~~~~~~~~~iD~I~~s~~~~~~~~---~~~~~~~------------~~~~~~~~~~~~~~SDH~PV~~~l~f 304 (304)
+ ........||||||+++++..... ....... .............+|||+||+++|+|
T Consensus 215 ~~~~~~~~~~~riDyI~~s~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~~~~ 289 (298)
T 3mpr_A 215 NNFDPNSFTESRIDHIFVSPSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVELVF 289 (298)
T ss_dssp CTTCTTCCCSCCCEEEEECTTSEEEEEEECCCCEEEECC----------------CCEEEECSSSBCCEEEEEEE
T ss_pred CCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 544678888861568996797404678996044323222223444444322234456788997842208999999