Probab=99.95 E-value=1.3e-25 Score=155.45 Aligned_cols=222 Identities=16% Similarity=0.174 Sum_probs=110.2
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 78826999983014788667666776531018899999999986089889999507857999860333430786214556
Q gi|254781003|r 20 VAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLI 99 (304)
Q Consensus 20 ~~~~lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (304)
+..++||+|||++++. ...+.+.+.++|.+.+||||||||+.....-........+..++......
T Consensus 2 ~~~~~kv~s~Nv~g~~--------------~~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (236)
T d1vyba_ 2 SNSHITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQANGKQ 67 (236)
T ss_dssp CCCCEEEEEEECSCCC--------------SHHHHHHHHHHHHHHCCSEEEEECCCCCTTSGGGCCCTTCCEEEEECCSS
T ss_pred CCCCEEEEEEECCCCC--------------CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCC
T ss_conf 9898699999928961--------------24558899999987798599998354762326345422540489751011
Q ss_pred CCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHH
Q ss_conf 75432234463158998258526765301224676555555653369999982994999999406788877520000257
Q gi|254781003|r 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 (304)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~v~n~Hl~~~~~~~~~~~~~~~ 179 (304)
...+.++.++.+.......... + .......+.+..++..+.++++|++.....
T Consensus 68 --------~~~g~~i~~k~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~--------- 120 (236)
T d1vyba_ 68 --------KKAGVAILVSDKTDFKPTKIKR-----D-----KEGHYIMVKGSIQQEELTILNIYAPNTGAP--------- 120 (236)
T ss_dssp --------SSCCEEEEECTTCCCEEEEEEE-----C-----TTSSEEEEEEEETTEEEEEEEEECCSSSHH---------
T ss_pred --------CCCCEEEEEECCCCCCCCCCCC-----C-----CCCCCEEEEEEECCCCCEEEEECCCCCCCH---------
T ss_conf --------2221146760365212356421-----1-----134310013431367624677413212207---------
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC---------HHHHHHHHHCCCCCCCCC----CCCCCCCCC
Q ss_conf 7899999999999998630368980999802688877662---------046898752255753111----445678765
Q gi|254781003|r 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLG---------NNDDFWKTIDPNDSLIRF----PKEKDSRCN 246 (304)
Q Consensus 180 ~~~~~~~q~~~l~~~~~~~~~~~~~vIi~GDfN~~~~~~~---------~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 246 (304)
..+. .+...+. ...+.|+|++||||....... ........+... ..... ........+
T Consensus 121 --~~~~----~~~~~~~--~~~~~~~Il~GDfN~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~d~~r~~~~~~~~~~~ 191 (236)
T d1vyba_ 121 --RFIK----QVLSDLQ--RDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQA-DLIDIYRTLHPKSTEYTF 191 (236)
T ss_dssp --HHHH----HHHHHTT--TTCCTTEEEEEECSSCSSGGGBTTCCCCCHHHHHHHHHHHHT-TEEEHHHHHCTTCCCCSE
T ss_pred --HHHH----HHHHHHC--CCCCCEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH-HCCCCCCEECCCCCCCCC
T ss_conf --8887----6655411--344320699630255543344135421103578899999864-123321100147864333
Q ss_pred CCCCCCCCCCEEEEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 646688820147999862043100247217864113455444555576343899984
Q gi|254781003|r 247 ANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 (304)
Q Consensus 247 ~~~~~~~~~~iD~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~l~ 303 (304)
.........||||||+|+.+....... ... + ..+|||+||+++|.
T Consensus 192 ~~~~~~~~~RiD~il~s~~~~~~~~~~--~i~--------~--~~~SDH~pv~~~lk 236 (236)
T d1vyba_ 192 FSAPHHTYSKIDHIVGSKALLSKCKRT--EII--------T--NYLSDHSAIKLELR 236 (236)
T ss_dssp EETTTTEEECCEEEEEEGGGGGGEEEE--EEE--------C--CSSSSSCEEEEEEC
T ss_pred CCCCCCCCCEEEEEEECHHHHHHCEEE--EEC--------C--CCCCCCCCEEEEEC
T ss_conf 278899776367999871897224089--989--------9--97998101899959
class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Endonuclease domain of LINE-1 reverse transcriptase homolog
species: Human (Homo sapiens) [TaxId: 9606]